BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780170|ref|YP_003064583.1| cationic amino acid ABC
transporter, periplasmic binding protein [Candidatus Liberibacter
asiaticus str. psy62]
         (342 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done



>gi|227821880|ref|YP_002825850.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234]
 gi|227340879|gb|ACP25097.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234]
          Length = 341

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 261/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    ++    ++   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MARRILTALFGAAVMGIGAQAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++A+F D +K++Y P +AKERF ALQS ++D+L+RNT WT+ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAVFGDATKVKYTPTSAKERFPALQSGEVDVLARNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H+ILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHMILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W HYA++ AEE G+TQ N+ ++ K + NPDVQRFLG++  S IG  LGLT +W   +I
Sbjct: 241 VTWVHYALIQAEEFGVTQANVEEMKK-SPNPDVQRFLGVEADSKIGTDLGLTNEWAVNVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGIQYAPPVR 341


>gi|116251960|ref|YP_767798.1| general L-amino acid substrate binding protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|3182887|sp|Q52812|AAPJ_RHIL3 RecName: Full=General L-amino acid-binding periplasmic protein
           AapJ; Flags: Precursor
 gi|1154894|emb|CAA57933.1| general amino acid ABC type transporter [Rhizobium leguminosarum]
 gi|115256608|emb|CAK07696.1| General L-amino acid substrate binding protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 341

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 190/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG  FRP
Sbjct: 61  VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   + S  +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + 
Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH+ILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHIILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG +  + IG  LGLT DW   +I
Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|241204488|ref|YP_002975584.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858378|gb|ACS56045.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 341

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 191/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG  FRP
Sbjct: 61  VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   + S  +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + 
Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EHVILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG +  + IG  LGLT DW   +I
Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|325292970|ref|YP_004278834.1| general L-amino acid-binding periplasmic protein AapJ precursor
           [Agrobacterium sp. H13-3]
 gi|325060823|gb|ADY64514.1| general L-amino acid-binding periplasmic protein AapJ precursor
           [Agrobacterium sp. H13-3]
          Length = 340

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 172/342 (50%), Positives = 250/342 (73%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++   +L   S ++ A  L D+K +GF+ CG++ G+ GF+     G+W G D
Sbjct: 1   MKKAILSAVIGAAVLGGASVASAA-TLQDVKSKGFVTCGVSAGIPGFSNPDDKGEWSGID 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CR +++A+F DP+K +++ L++K+RF ALQS ++D+L+RNT WT+ R+ SLG  FR 
Sbjct: 60  VDYCRGIATAVFGDPTKAKFVALSSKDRFPALQSGEVDVLTRNTTWTISRDTSLGFNFRT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI  K   + S  +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE+  
Sbjct: 120 VNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKES 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  +AY + RCD YT D S LYA++L    P ++++LP++ISK PL PA+ QGD +W++I
Sbjct: 180 DATSAYDSGRCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W HYAMV AEELGIT KN+++  K++ NPD++R LG ++ + IG  LG+T DW Y I+
Sbjct: 240 VTWVHYAMVNAEELGITSKNVDE-QKNSANPDIKRLLGTEEGTKIGTDLGVTNDWAYNIV 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 299 KKVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR 340


>gi|327190790|gb|EGE57858.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CNPAF512]
          Length = 341

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR 
Sbjct: 61  VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++
Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW  YAM+ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y II
Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNII 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|15965231|ref|NP_385584.1| general L-amino acid-binding periplasmic ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307316996|ref|ZP_07596437.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti AK83]
 gi|15074411|emb|CAC46057.1| Probable general L-amino acid-binding periplasmic ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306897084|gb|EFN27829.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti AK83]
          Length = 341

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 189/342 (55%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++   ++   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+  + S  +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H++LP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYA+V AEE G+TQ N+ ++ K +TNPDVQRFLG++  S IG  LGLT +W   I+
Sbjct: 241 VSWVHYALVQAEEFGVTQANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341


>gi|209549162|ref|YP_002281079.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209534918|gb|ACI54853.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 341

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 191/342 (55%), Positives = 262/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++   +    + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG  FRP
Sbjct: 61  VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   + S  +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + 
Sbjct: 121 VTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EHVILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG +  + IG  LGLT DW   +I
Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|307309254|ref|ZP_07588922.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti BL225C]
 gi|306900255|gb|EFN30872.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti BL225C]
          Length = 341

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++   ++   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+  + S  +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H++LP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYA+V AEE G+T+ N+ ++ K +TNPDVQRFLG++  S IG  LGLT +W   I+
Sbjct: 241 VSWVHYALVQAEEFGVTRANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341


>gi|190891587|ref|YP_001978129.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190696866|gb|ACE90951.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 341

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 187/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR 
Sbjct: 61  VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++
Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW  YAM+ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y I+
Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|86357519|ref|YP_469411.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
 gi|86281621|gb|ABC90684.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 348

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 187/342 (54%), Positives = 263/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +    + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 8   MKNKLLSAAIGAAVFALGASAASATTLGDVKAKGFIQCGVNTGLAGFAAPDASGNWAGFD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR 
Sbjct: 68  VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++
Sbjct: 128 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PLAPA+ QGD +W++I
Sbjct: 188 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 247

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW  YAM+ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y I+
Sbjct: 248 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 306

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G  S LKI RG NALWSKGG+ YAPP+R
Sbjct: 307 KNVGNYGEVFERNIGQGSPLKIARGLNALWSKGGIQYAPPVR 348


>gi|239831564|ref|ZP_04679893.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823831|gb|EEQ95399.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 360

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 251/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GF+     G+W GFD
Sbjct: 18  MKKTLMTGVLGAAALFCVASGASADTLSDVKAKGFLQCGVNTGLLGFSSPNDKGEWSGFD 77

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS +ID+L RNT WT+ R+ +LGL F  
Sbjct: 78  VDYCRAVASAIFGDPAKVKFTPLNAKERFTALQSGEIDVLIRNTTWTISRDTALGLDFAG 137

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I YFDGQGF++   K  GI+S  QLSGASICVQAGTTTE+ +ADYF+A+ M+Y+P+VFE+
Sbjct: 138 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTEMNMADYFRANKMEYNPVVFEK 197

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD++W 
Sbjct: 198 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWT 257

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V W H A++ AEE GITQ N+ ++ K + NPD++R LG++  + IG  LGL  DW  +
Sbjct: 258 DVVRWVHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLENDWVVK 316

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 317 IIKGVGNYGEIFERNIGSGSPLKIARGINAQWNKGGLQYGIPVR 360


>gi|217977867|ref|YP_002362014.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Methylocella silvestris BL2]
 gi|217503243|gb|ACK50652.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Methylocella silvestris BL2]
          Length = 340

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/343 (53%), Positives = 243/343 (70%), Gaps = 4/343 (1%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K +   ++  L ++   +    A +L  ++KRG++ CG N G+ GF      G W GF
Sbjct: 1   MFKMNVVRTLFALGLMIGCAQGAQAGLLDQVQKRGYVICGSNPGVPGFGLPDDKGGWTGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFCRA+++AIF+DP+K++++ L+AK+RF ALQS ++D+LSRNT WTL RE   G  F 
Sbjct: 61  DVDFCRAVAAAIFNDPTKVKFIALSAKDRFTALQSGEVDLLSRNTTWTLSRETGQGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            ITY+DGQGF++ KK  +SS  +LSGASICVQ GTTTEL LAD+F+ +NMKY P+ F   
Sbjct: 121 GITYYDGQGFLVRKKLNLSSALELSGASICVQQGTTTELNLADFFRGNNMKYEPVNFANA 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE   A+   RCDAYT D S LY  +     P + V+LP+IISK PL PA+ QGD  W+N
Sbjct: 181 EEAVRAFEGGRCDAYTTDASGLYVERQRLADPEDSVVLPEIISKEPLGPAVRQGDDGWFN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +A+V AEELG+T KN+++ +K +  P+V+R LG +   N GE LGL  DW YRI
Sbjct: 241 VVKWTLFALVNAEELGVTSKNVDEKAK-SDRPEVRRLLGFE--GNFGEPLGLDADWAYRI 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++H+GNYGE+FDRNLG+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 298 VKHVGNYGEIFDRNLGDSSPLKIKRGINALWTKGGLQYAPPIR 340


>gi|298291387|ref|YP_003693326.1| cationic amino acid ABC transporter periplasmic protein [Starkeya
           novella DSM 506]
 gi|296927898|gb|ADH88707.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Starkeya novella DSM 506]
          Length = 339

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 164/340 (48%), Positives = 230/340 (67%), Gaps = 2/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    +          + S  A+ L  +K +GF++CG++ GL GF+     G+W G DVD
Sbjct: 2   KRLLSTFAIAGAFGLCAVSAQAAKLDQVKSKGFIQCGVSQGLPGFSTPDDKGNWTGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F+DP+K+++ PL+AK+RF ALQS  IDILSRNT WT+ R+ SLGL F  +T
Sbjct: 62  FCRAVAAAVFNDPTKVKFTPLSAKDRFTALQSGDIDILSRNTTWTITRDTSLGLNFTGVT 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ K K ++S  +LSGAS+C Q GTTTE  LADYF+A+NM Y  I F   +E+
Sbjct: 122 YYDGQGFMIRKDKKVNSALELSGASVCTQTGTTTEQNLADYFRANNMTYEVIAFATNDEV 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             AY A RCD  T D S L   +L    P +HV+LP+IISK PL P +  GD +W++IV 
Sbjct: 182 VKAYDAGRCDVLTTDRSGLAGERLKLTNPDDHVVLPEIISKEPLGPVVAHGDDQWFDIVK 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W  +A + AEELG+T KN+++  K  TNP+++R +G +     GE +G+  DW Y++I+ 
Sbjct: 242 WVLFAQINAEELGVTSKNVDEQLKSATNPEIKRLVGTE--GKFGEGMGIGNDWAYQVIKG 299

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGEM+DRN+G  + LK+ RG NALW+KGG  Y  PIR
Sbjct: 300 VGNYGEMYDRNVGPATPLKLERGANALWTKGGQQYGMPIR 339


>gi|330504740|ref|YP_004381609.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
 gi|328919026|gb|AEB59857.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
          Length = 342

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 172/342 (50%), Positives = 240/342 (70%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    +L  + F+   + L  ++K+GF++CGI+ GL GF+     G++ G D
Sbjct: 3   MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+ +LGL F  
Sbjct: 63  VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDAALGLNFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF+++KK G+SS  +L GA++C+QAGTTTEL L+DYF+A+ MKY PI ++  +
Sbjct: 123 VTYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGMKYTPITYDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  A RCD  T D S LYA ++    P ++V+LP++ISK PL P++ QGD EW++I
Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPSVRQGDEEWFDI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEELG+T  N+ + +K T NPDV R LG +     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  SELKI RG NALW+KGGL YAPP+R
Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342


>gi|146308575|ref|YP_001189040.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
 gi|145576776|gb|ABP86308.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 342

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/342 (50%), Positives = 237/342 (69%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    +L  + F+   + L  ++K+GF++CGI+ GL GF+     G++ G D
Sbjct: 3   MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+  LGL F  
Sbjct: 63  VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDSGLGLNFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+++KK G+SS  +L GA++C+QAGTTTEL L+DYF+A+ +KY PI ++  +
Sbjct: 123 VNYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGLKYTPITYDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  A RCD  T D S LYA ++    P ++V+LP++ISK PL P + QGD EW+NI
Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPVVRQGDDEWFNI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +AMV AEELG+T  N+ + +K T NPDV R LG +     G+ L L KDW  +I+
Sbjct: 243 VRWSLFAMVNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  SELKI RG NALW+KGGL YAPP+R
Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342


>gi|153009884|ref|YP_001371099.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561772|gb|ABS15270.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Ochrobactrum anthropi ATCC 49188]
          Length = 343

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFSVASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ +LGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTALGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I YFDGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD++W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG++  + IG  LGL  DW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLDNDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++ +GNYGE+F+RN+G  S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IVKGVGNYGEIFERNIGASSPLKIARGINAQWNKGGLQYGVPVR 343


>gi|148255314|ref|YP_001239899.1| putative amino-acid ABC transporter substrate-binding protein
           [Bradyrhizobium sp. BTAi1]
 gi|146407487|gb|ABQ35993.1| general L-amino acid-binding protein [Bradyrhizobium sp. BTAi1]
          Length = 338

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 239/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +        L  +   S    A  L  +K RG L CG++ GL GF+     G+W G D
Sbjct: 1   MKRVTLALTFALAPIL-ASVGAQADTLKTVKDRGMLACGVSQGLPGFSSPDDKGNWTGID 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIF+DP+KI+++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG  F  
Sbjct: 60  VDVCRAVAAAIFNDPTKIKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGANFAG 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   ++S  +L+ AS+CVQ GTTTE  LADYFKA+ MKY  I F   +
Sbjct: 120 VTYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD YT D+S LYA +L    P++HV+LP++ISK PL P +  GD +W++I
Sbjct: 180 ETVKAYESGRCDVYTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A+VTAEELG+TQ N+++++K +  P+ +R  G D   N+GE LGLTKDW  RI+
Sbjct: 240 VKWTLFALVTAEELGVTQANVDEMAK-SDKPEFKRAFGTD--GNLGEQLGLTKDWFSRIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+++RN+G  S+L+I RG N LW+KGGL YAPPIR
Sbjct: 297 KAVGNYGEVYERNVGAGSKLQIARGLNQLWNKGGLQYAPPIR 338


>gi|150396327|ref|YP_001326794.1| cationic amino acid ABC transporter periplasmic binding protein
           [Sinorhizobium medicae WSM419]
 gi|150027842|gb|ABR59959.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium medicae WSM419]
          Length = 341

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++   ++   S++ +A+ L D+K +GF++CG+NTGL GFA   A+GDW GFD
Sbjct: 1   MARTILTALVSAAVMGVGSYAASAATLDDVKAKGFVQCGVNTGLAGFAAPNASGDWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++A+F D +K++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAVFGDATKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+  + S  +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H++LP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYA+V AEE G+TQ N+ ++ K + NPDVQRFLG++  S IG  LGLT +W   I+
Sbjct: 241 VSWVHYALVQAEEFGVTQANVEEMKK-SANPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341


>gi|110633466|ref|YP_673674.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium sp. BNC1]
 gi|110284450|gb|ABG62509.1| general L-amino acid-binding protein [Chelativorans sp. BNC1]
          Length = 340

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/340 (48%), Positives = 245/340 (72%), Gaps = 3/340 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           +   ++L  +++       +A+ L D+K RG L+CG+NTGL GFA     GDW+G DVD+
Sbjct: 3   NLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDY 62

Query: 64  CRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           C+A+++A+F  D +K+QY PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F  + 
Sbjct: 63  CKAVAAAVFEGDATKVQYSPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVN 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ +   ++S  QLSGA++CVQ+GTTTEL L DYF+A+NM+++P+V E+  ++
Sbjct: 123 YYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNLTDYFRANNMEFNPVVIEQQSDV 182

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           ++AY   RCD  T D S LYA +L    P +HV+LP+IISK PL P + QGD +W++IV 
Sbjct: 183 NSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDIVK 242

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W H+ ++ AEELG+TQ N+  ++ ++ NPDV+R LG D     G+ +GLT DW   +I+ 
Sbjct: 243 WVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGAD--GTFGQDVGLTNDWMVNVIKA 300

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+FDRN+G  + LKI RG NALW+KGGL YAPP+R
Sbjct: 301 VGNYGEIFDRNVGPNTPLKIQRGLNALWTKGGLQYAPPVR 340


>gi|23501628|ref|NP_697755.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|148560716|ref|YP_001258723.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161618711|ref|YP_001592598.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           canis ATCC 23365]
 gi|163843013|ref|YP_001627417.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           suis ATCC 23445]
 gi|225627243|ref|ZP_03785280.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti str. Cudo]
 gi|254704068|ref|ZP_05165896.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           suis bv. 3 str. 686]
 gi|254718861|ref|ZP_05180672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           83/13]
 gi|256060862|ref|ZP_05451022.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           neotomae 5K33]
 gi|256369174|ref|YP_003106682.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260168486|ref|ZP_05755297.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|260566684|ref|ZP_05837154.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261324858|ref|ZP_05964055.1| cationic amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261754726|ref|ZP_05998435.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|261757954|ref|ZP_06001663.1| cationic amino acid ABC transporter [Brucella sp. F5/99]
 gi|265983846|ref|ZP_06096581.1| cationic amino acid ABC transporter [Brucella sp. 83/13]
 gi|306837636|ref|ZP_07470506.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           NF 2653]
 gi|306842009|ref|ZP_07474682.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO2]
 gi|306843688|ref|ZP_07476288.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO1]
 gi|23347545|gb|AAN29670.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|148371973|gb|ABQ61952.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161335522|gb|ABX61827.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           canis ATCC 23365]
 gi|163673736|gb|ABY37847.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           suis ATCC 23445]
 gi|225617248|gb|EEH14293.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti str. Cudo]
 gi|255999334|gb|ACU47733.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260156202|gb|EEW91282.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261300838|gb|EEY04335.1| cationic amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261737938|gb|EEY25934.1| cationic amino acid ABC transporter [Brucella sp. F5/99]
 gi|261744479|gb|EEY32405.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|264662438|gb|EEZ32699.1| cationic amino acid ABC transporter [Brucella sp. 83/13]
 gi|306275998|gb|EFM57707.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO1]
 gi|306287850|gb|EFM59270.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO2]
 gi|306407285|gb|EFM63494.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           NF 2653]
          Length = 343

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|222085840|ref|YP_002544371.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221723288|gb|ACM26444.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 344

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 183/342 (53%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    L ++    +AS L D+K +GF++CG+NT L+GF++  A+G++ GFD
Sbjct: 4   MKKIALSAFLGAAALAYSVSGASASTLSDVKAKGFVQCGVNTALLGFSQPDASGNYSGFD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD C+A+++A+F D +K++Y  L++K+RF ALQS +ID+LSRNT WTL R+ +LGL FRP
Sbjct: 64  VDMCKAVAAAVFGDVTKVKYTALSSKDRFTALQSGEIDLLSRNTTWTLNRDTALGLNFRP 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K+  + S  +LSGA++CVQ+GTTTEL LADYFK++N++Y+P+VF+++E
Sbjct: 124 VTYYDGQGFMVRKELNVKSALELSGAAVCVQSGTTTELNLADYFKSNNLQYNPVVFDKLE 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY + RCD YT D S LY+L+LT   P ++V+LP+IISK PL PA+ QGD +W++I
Sbjct: 184 EVNAAYDSGRCDVYTTDQSGLYSLRLTLKNPDDNVVLPEIISKEPLGPAVRQGDDQWFDI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+WT YA++ AEE GITQKN++++ K + NPD++RFLG ++ S +G  +GLT DW Y +I
Sbjct: 244 VTWTAYALINAEEFGITQKNVDEM-KSSANPDIKRFLGAEQGSTLGTDMGLTNDWAYNVI 302

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 303 KGVGNYGEVFDRNIGAGSPLKIARGLNALWNKGGIQYAPPVR 344


>gi|83648448|ref|YP_436883.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis
           KCTC 2396]
 gi|83636491|gb|ABC32458.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Hahella chejuensis KCTC
           2396]
          Length = 339

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/342 (49%), Positives = 236/342 (69%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  ++  L  +  T  +     L  +KK+GF++CG++TGL GF+     G+W G D
Sbjct: 1   MKKTFVSAVAALGFMTATGAAMADGTLDAVKKKGFVQCGVSTGLPGFSNPDDKGNWMGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  
Sbjct: 61  VDLCRAVAAATLGDASKVKYIPLTAKERFTALQSGEIDLLSRNTTWTLTRDGSLGLNFAG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GA++C+QAGTTTEL LADYF+   MKY P+VF+  +
Sbjct: 121 VNYYDGQGFLVSKDLGVKSAKELDGAAVCIQAGTTTELNLADYFREFGMKYQPVVFDTSD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL++    P + ++LP++ISK PL P + QGD +W+NI
Sbjct: 181 QTVKGFEAGRCDVLTSDQSQLYALRIQLSNPDKAMVLPEVISKEPLGPVVRQGDDQWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A +TAEELG++  N++++ K +TNP+VQR LG +     G+ LGL   W + I+
Sbjct: 241 VKWSLFAAITAEELGVSSDNVDKM-KSSTNPNVQRLLGAEAGQ--GKNLGLDDTWAFNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMF+RN+G  S L I RG NALW+KGGL YAPPIR
Sbjct: 298 KQVGNYGEMFERNVGKSSPLGIERGLNALWTKGGLQYAPPIR 339


>gi|256159474|ref|ZP_05457242.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti M490/95/1]
 gi|256254760|ref|ZP_05460296.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti B1/94]
 gi|261221938|ref|ZP_05936219.1| cationic amino acid ABC transporter [Brucella ceti B1/94]
 gi|265997901|ref|ZP_06110458.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|260920522|gb|EEX87175.1| cationic amino acid ABC transporter [Brucella ceti B1/94]
 gi|262552369|gb|EEZ08359.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1]
          Length = 343

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDSCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K   I+S  QLSGASICVQAG+TTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLADINSALQLSGASICVQAGSTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|254709861|ref|ZP_05171672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           pinnipedialis B2/94]
 gi|256031353|ref|ZP_05444967.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           pinnipedialis M292/94/1]
 gi|261317400|ref|ZP_05956597.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|265988437|ref|ZP_06100994.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M292/94/1]
 gi|261296623|gb|EEY00120.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|264660634|gb|EEZ30895.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M292/94/1]
          Length = 343

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNNKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|182678577|ref|YP_001832723.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634460|gb|ACB95234.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 336

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 181/342 (52%), Positives = 240/342 (70%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K    + L        +    A  L ++K RGFL CG N GL GF      G W GFD
Sbjct: 1   MFKSIVSAGL---FSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+++AIFDDP+K+++LPL+ K+RF ALQS +IDILSRNT WT  RE+  G  F  
Sbjct: 58  IDFCRAVAAAIFDDPTKVKFLPLSGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITY+DGQGF+ H+K  ++S  +L+GASICVQ GTTTEL LAD+F+A+N++Y P+ F   +
Sbjct: 118 ITYYDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADFFRANNLQYEPVNFATGD 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY   RCDA T D S LYA +     P +HV+LP+IISK PL P + QGD +W+N+
Sbjct: 178 EALKAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNL 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W H+A + AEE G+T KN+++ +K + +P+++R LG +   N GE LGLT+DW YRII
Sbjct: 238 VKWVHFAWLNAEEDGVTSKNLDEKTK-SESPEIKRLLGFE--GNFGEGLGLTRDWIYRII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNYGE+FDRNLG  S+LKI RG N LW+KGGL YAPP+R
Sbjct: 295 KHVGNYGEVFDRNLGEGSKLKIKRGINNLWTKGGLHYAPPVR 336


>gi|254713861|ref|ZP_05175672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti M644/93/1]
 gi|254717082|ref|ZP_05178893.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti M13/05/1]
 gi|261218893|ref|ZP_05933174.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261321608|ref|ZP_05960805.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260923982|gb|EEX90550.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294298|gb|EEX97794.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 343

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQ GTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQVGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAEWNKGGLQYGIPVR 343


>gi|146340850|ref|YP_001205898.1| putative amino-acid ABC transporter substrate-binding protein
           [Bradyrhizobium sp. ORS278]
 gi|146193656|emb|CAL77673.1| putative amino-acid ABC transporter, substrate-binding protein
           [Bradyrhizobium sp. ORS278]
          Length = 338

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 240/342 (70%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L L  +   S    A  L  +K RG L CG++ GL GF+     G+W G D
Sbjct: 1   MKRVTLALTLALAPVL-ASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIF+DP+K++Y+PL+AK+RF ALQS ++D+LSRNT WTL R+ SLG  F  
Sbjct: 60  VDVCRAIAAAIFNDPTKVKYVPLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAG 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITY+DGQGF++ K   ++S  +L+ AS+CVQ GTTTE  LADYFKA+ MKY  I F   +
Sbjct: 120 ITYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD +T D+S LYA +L    P++HV+LP++ISK PL P +  GD +W++I
Sbjct: 180 ETVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT + ++TAEE+G+TQ N+++++K +  PD +R  G D   N+GE LGLTKDW  RI+
Sbjct: 240 VKWTLFGLITAEEMGVTQANVDEMAK-SDKPDFKRAFGTD--GNLGEQLGLTKDWFSRIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEM+DRN+G+ S+L+I RG N LW+KGGL YAPPIR
Sbjct: 297 KAVGNYGEMYDRNVGSGSKLQIARGLNQLWNKGGLQYAPPIR 338


>gi|158423209|ref|YP_001524501.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158330098|dbj|BAF87583.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 336

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 239/342 (69%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     I    +L  T+ +  A  L D+K RG L CG++ GL GF+     G+WKG D
Sbjct: 1   MKRIL---IAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++AIF+DP+K+++ PL+AK+RF ALQS  ID+LSRNT WT+ R+ +LG  F  
Sbjct: 58  VDFCRAVAAAIFNDPNKVRFTPLSAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+ K   I S  +L+GASICVQAGTTTEL L D+F+A+NMKY  I F   +
Sbjct: 118 VMYYDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDFFRANNMKYEVITFSTED 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD++T D S +YA+KL     ++HV+LP++ISK PL P +  GD +W+++
Sbjct: 178 ETVKAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDL 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT+YA++ +EELG++QK ++Q S  +TNP+++R LG D     GE +GLT DW  RII
Sbjct: 238 VKWTYYALLNSEELGVSQKTLDQ-SMTSTNPEIKRLLGTD--GKFGEGIGLTNDWVVRII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S L I RG N LW+KGGL Y  PIR
Sbjct: 295 KAVGNYGEIFDRNVGTGSPLGIDRGENKLWNKGGLQYGMPIR 336


>gi|17987494|ref|NP_540128.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 1 str. 16M]
 gi|254689006|ref|ZP_05152260.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella abortus bv. 6 str. 870]
 gi|254693490|ref|ZP_05155318.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella abortus bv. 3 str. Tulya]
 gi|256044431|ref|ZP_05447335.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113275|ref|ZP_05454143.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 3 str. Ether]
 gi|256257256|ref|ZP_05462792.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella abortus bv. 9 str. C68]
 gi|260563783|ref|ZP_05834269.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|260754500|ref|ZP_05866848.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str.
           870]
 gi|260883528|ref|ZP_05895142.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str.
           C68]
 gi|261213748|ref|ZP_05928029.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|265990852|ref|ZP_06103409.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994687|ref|ZP_06107244.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|297248104|ref|ZP_06931822.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|17983192|gb|AAL52392.1| general l-amino acid-binding periplasmic protein aapj precursor
           [Brucella melitensis bv. 1 str. 16M]
 gi|260153799|gb|EEW88891.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|260674608|gb|EEX61429.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str.
           870]
 gi|260873056|gb|EEX80125.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str.
           C68]
 gi|260915355|gb|EEX82216.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|262765800|gb|EEZ11589.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001636|gb|EEZ14211.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|297175273|gb|EFH34620.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 343

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|90424048|ref|YP_532418.1| lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB18]
 gi|90106062|gb|ABD88099.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB18]
          Length = 350

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 166/340 (48%), Positives = 237/340 (69%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +++   +   F + +  A  L  ++ RG L CG++ GL GF+     G+W G DVD
Sbjct: 14  KRVSLALSVAVAAGFLTQAAGAQTLKTVQDRGVLSCGVSQGLPGFSAPDDKGNWTGIDVD 73

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++A+F+DP+K++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F  +T
Sbjct: 74  VCRAIAAAVFNDPTKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFTGVT 133

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ K   ++S  +L+ ASICVQ GTT E  +ADYFK +NMKY  I F   +E 
Sbjct: 134 YYDGQGFLVRKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFGTADEA 193

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             AY + RCD +T D+S LYAL+L    P++H +LP++ISK PL P +  GD +W++IV 
Sbjct: 194 VKAYESGRCDVFTSDVSQLYALRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVK 253

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +A++ AEELG+ QKN++  +K    P+++R  G D   N+GE LGLTKDW  RI++ 
Sbjct: 254 WTLFALLNAEELGVNQKNVDDQAKLDK-PELKRVFGTD--GNLGEQLGLTKDWVIRIVKA 310

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GNYGE+FDRN+G  S+L I RG N LW+KGG+ YAPPIR
Sbjct: 311 TGNYGEIFDRNVGAGSKLGIARGLNQLWNKGGIQYAPPIR 350


>gi|261342745|ref|ZP_05970603.1| general amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315398|gb|EFC54336.1| general amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 341

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 236/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +LF  +   +A   L  +KK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKTMIASLAAAGVLFAVASQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA++MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANSMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD +W++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT KN+++ + + + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGITSKNVDEKAANPSTPDMSHLLGKE--GDFGKDLKLDNKWAYHI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 VKQVGNYGEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|311277770|ref|YP_003940001.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308746965|gb|ADO46717.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 341

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 165/343 (48%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S +   +LF  +   +A      IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKTTIASFVAAGVLFAIASQAHAGATFDAIKKKGFVQCGISDGLPGFSYADADGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +GL+F 
Sbjct: 61  DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGLSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E V+LP++ISK PL P + +GD EW+ 
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPTEWVVLPEVISKEPLGPVVRRGDDEWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN+++ + + +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSKNVDEKAANPSNPDMSHLLGKE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYAEIFDRNVGADSPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|27379557|ref|NP_771086.1| ABC transporter amino acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352709|dbj|BAC49711.1| ABC transporter amino acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 338

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/320 (53%), Positives = 231/320 (72%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  L  +K RG L CG++ GL GF+     G+W G DVD CRA+++AIF+DP+K++++P
Sbjct: 22  DAQTLKTVKDRGTLSCGVSQGLPGFSAPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKFVP 81

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +AK+RF ALQS +ID+LSRNT WT+ R+ SLG  F  +TY+DGQGF++ K   ++S  +
Sbjct: 82  TSAKDRFTALQSGEIDVLSRNTTWTISRDTSLGANFTGVTYYDGQGFMVKKSLKVNSALE 141

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+ AS+CVQ GTTTE  LADYFKA+NMKY  I F   +E   AY A RCD +T D S LY
Sbjct: 142 LNSASVCVQTGTTTEQNLADYFKANNMKYEVIAFGTNDETVKAYEAGRCDVFTTDQSGLY 201

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +L    P++H++LP+IISK PL P +  GD +W++IV WT +A+VT EELG+T KN++
Sbjct: 202 ANRLKLANPNDHMVLPEIISKEPLGPMVRHGDDQWFDIVKWTLFALVTTEELGVTSKNVD 261

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           + +K   +P+++R LG D   N GE LGLTKDW  RI++ +GNYGE+FDRN+G  S L I
Sbjct: 262 EKAK-LESPELKRVLGSD--GNFGEQLGLTKDWVVRIVKAVGNYGEVFDRNVGAGSPLAI 318

Query: 323 PRGYNALWSKGGLMYAPPIR 342
            RG N LW+KGGL YAPPIR
Sbjct: 319 NRGLNNLWNKGGLQYAPPIR 338


>gi|327479738|gb|AEA83048.1| extracellular solute-binding protein [Pseudomonas stutzeri DSM
           4166]
          Length = 342

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 236/325 (72%), Gaps = 2/325 (0%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  +   + L  ++K+GF++CGI+ GL GF+   A G ++G DVD CRA+++A+F D +K
Sbjct: 20  SGLAQAGATLDAVQKKGFVQCGISDGLPGFSFADAKGQFQGIDVDVCRAVAAAVFGDATK 79

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y PL AKERF ALQS ++D+LSRNT WT  R+ ++GL F  +TY+DGQGF+++K+ G+
Sbjct: 80  VKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTGVTYYDGQGFLVNKELGV 139

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           SS  +L GA++C+QAGTTTEL L+DYF+A+  KY PI ++  +E   +  + RCD  T D
Sbjct: 140 SSAKELDGATVCIQAGTTTELNLSDYFRANGHKYTPITYDTSDESAKSLESGRCDVLTSD 199

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            S LYA ++   +P ++V+LP++ISK PL PA+ QGD EW++IV WT +AM+ AEELG+T
Sbjct: 200 QSQLYAQRIKLAKPDDYVVLPEVISKEPLGPAVRQGDEEWFDIVRWTLFAMLNAEELGVT 259

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
             N+  ++K T NPDV R LG +     G+ L L KDW  +I++ +GNYGE+FDRN+G  
Sbjct: 260 SANVEDMAKSTKNPDVARLLGAE--GEYGKDLRLPKDWAVQIVKQVGNYGEIFDRNVGAG 317

Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342
           SELKI RG NALW+KGGL YAPP+R
Sbjct: 318 SELKIERGLNALWNKGGLQYAPPVR 342


>gi|91977030|ref|YP_569689.1| lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB5]
 gi|91683486|gb|ABE39788.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB5]
          Length = 338

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/342 (50%), Positives = 240/342 (70%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    + + +    F + S  A  L  +K RG L CG++ GL GF+     G+W G D
Sbjct: 1   MKRVSLAAAVAITA-CFAAQSAGAQTLKTVKDRGLLSCGVSQGLPGFSAPDDKGNWTGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIFDDPSK++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F  
Sbjct: 60  VDLCRAVAAAIFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFAG 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQGF++ K   ++S  +L+ ASICVQ GTT E  +ADYFK +NMKY  I F   +
Sbjct: 120 VSYYDGQGFLVKKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFANAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD +T D+S LYA +L    P++HV+LP++ISK PL P +  GD +W++I
Sbjct: 180 EAIKAYESGRCDVFTSDVSQLYAQRLKVTTPADHVVLPEVISKEPLGPLVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A+V AEELG+TQ N+ +++K +  P+++R  G D   N+GE LGLTKDW  RI+
Sbjct: 240 VKWTLFALVNAEELGVTQSNVGEMAK-SDKPELKRVFGSD--GNLGEQLGLTKDWVARIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE F+RN+G  S+L+I RG N LW+KGG+MYAPPIR
Sbjct: 297 KATGNYGESFERNVGTGSKLEIARGLNKLWNKGGIMYAPPIR 338


>gi|260596110|ref|YP_003208681.1| putative amino-acid ABC transporter-binding protein yhdW
           [Cronobacter turicensis z3032]
 gi|260215287|emb|CBA27219.1| Putative amino-acid ABC transporter-binding protein yhdW
           [Cronobacter turicensis z3032]
          Length = 353

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++     LF  +   +A   L  +KK+GF++CGI+ GL GF+   A G + G 
Sbjct: 13  MKKMMIATLAAAGTLFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 73  DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 132

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 133 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 192

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 193 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWFS 252

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN++  + + + PD+   LG +   + G+ L L   W Y I
Sbjct: 253 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 310

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R
Sbjct: 311 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 353


>gi|225852259|ref|YP_002732492.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis ATCC 23457]
 gi|256264234|ref|ZP_05466766.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
 gi|225640624|gb|ACO00538.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis ATCC 23457]
 gi|263094479|gb|EEZ18301.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
          Length = 343

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|296104983|ref|YP_003615129.1| general L-amino acid transport system substrate-binding protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059442|gb|ADF64180.1| general L-amino acid transport system substrate-binding protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 341

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 234/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +LF  +   +A   L  +KK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKTMIASLAAAGMLFAVAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD +W++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI+ KN+++ +   + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGISSKNVDEKAAKPSTPDMAHLLGTE--GDFGKDLKLDNKWAYHI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|299133835|ref|ZP_07027029.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Afipia sp. 1NLS2]
 gi|298591671|gb|EFI51872.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Afipia sp. 1NLS2]
          Length = 339

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 169/342 (49%), Positives = 238/342 (69%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +F  ++  + L   S     + L  +++RG L CG++ GL GF+     G W G D
Sbjct: 1   MKYGWFGIVMTSVFLGSLSPVNAQATLKAVQERGVLSCGVSQGLPGFSAPDDTGKWSGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRAL++ + +DP K++++PL+AK+RF ALQS +ID+LSRNT W+L R+ SLGL F  
Sbjct: 61  VDFCRALAAVVLNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSLSRDTSLGLNFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   ++S  +L+GAS+CVQ GTT E  LADYF+A+NMKY  + F   +
Sbjct: 121 VMYYDGQGFLVRKALKVNSALELNGASVCVQTGTTNEQNLADYFRANNMKYEVVAFSTAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD +T D+S LYA +L    P +HV+LP+IISK PL P +  GD +W++I
Sbjct: 181 ETIKAYESGRCDVFTSDVSQLYAERLKLTVPDDHVVLPEIISKEPLGPVVRHGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEEL +TQKN+ +++K +  P++ R LG D   N+GE LGLTKDW  RI+
Sbjct: 241 VKWTLFAMINAEELNVTQKNVGEMTK-SNKPEIARLLGTD--GNLGEQLGLTKDWVVRIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  S+L+I RG N LW++GG+ YAPPIR
Sbjct: 298 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPIR 339


>gi|283836183|ref|ZP_06355924.1| general amino acid ABC transporter, periplasmic binding protein
           [Citrobacter youngae ATCC 29220]
 gi|291067534|gb|EFE05643.1| general amino acid ABC transporter, periplasmic binding protein
           [Citrobacter youngae ATCC 29220]
          Length = 341

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMIIASLAAAGVLLAIANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  KN+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|209885181|ref|YP_002289038.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
 gi|209873377|gb|ACI93173.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
          Length = 338

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 172/342 (50%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +F  ++  +I+   +   +A  L  IK RG L CG++ GL GF+     G W G D
Sbjct: 1   MKYGWFGIVMTSLIVGGLA-PASAQTLKTIKDRGVLSCGVSQGLPGFSAPDDTGKWSGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRALS+AIF+DP K++++PL+AK+RF ALQS +ID+LSRNT W++ R+ SLGL F  
Sbjct: 60  VDFCRALSAAIFNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSMSRDTSLGLNFTA 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   ++S  +L+GAS+CVQ GTT E  LADYF+A+ MKY  + F   +
Sbjct: 120 VMYYDGQGFLVRKSLKVNSALELNGASVCVQTGTTNEQNLADYFRANGMKYEVVAFATAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA+T D+S LYA +L    P +H +LPDIISK PL P +  GD +W++I
Sbjct: 180 ETMKAYESGRCDAFTSDVSQLYAERLKLTVPDDHAVLPDIISKEPLGPVVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEEL +TQKN+  + K +  P++ R LG D   N GE LGLTKDW  RI+
Sbjct: 240 VKWTLFALLNAEELAVTQKNVGDMVK-SNKPEIARLLGSD--GNFGEQLGLTKDWVVRIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  S+L+I RG N LW++GG+ YAPP+R
Sbjct: 297 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPVR 338


>gi|157148848|ref|YP_001456167.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895]
 gi|157086053|gb|ABV15731.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895]
          Length = 341

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+  + +L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIASLAAVGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSDPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 VVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|146313341|ref|YP_001178415.1| extracellular solute-binding protein [Enterobacter sp. 638]
 gi|145320217|gb|ABP62364.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Enterobacter sp. 638]
          Length = 341

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +LF  +   +A   L  +KK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKTMIASLAAAGMLFAVAGQAHAGATLDAVKKKGFVQCGISDGLPGFSYADANGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAALFGDDTKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMTFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW +
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWTS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN+++ +   + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWTLFAMLNAEEMGINSKNVDEKAAAPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+H+GNYGE+F RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKHVGNYGEIFARNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|92117599|ref|YP_577328.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14]
 gi|91800493|gb|ABE62868.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 344

 Score =  366 bits (939), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 171/347 (49%), Positives = 237/347 (68%), Gaps = 8/347 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M     V       L   S S   S      L  +K RG L CG++ GL GF+     G+
Sbjct: 1   MKCVLAVIFAIAAGLPLQSASAQESAKVKTTLEAVKTRGMLSCGVSQGLPGFSAPDDKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSRNT WTL R+ SLG
Sbjct: 61  WTGLDVDVCRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRNTTWTLSRDTSLG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F  +TY+DGQGF++ K   ++S  +L+ AS+CVQ GTTTE  LADYFK++ MKY  I 
Sbjct: 121 ANFTGVTYYDGQGFLVRKSLKVNSALELNSASVCVQTGTTTEQNLADYFKSNKMKYEVIA 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F   +E   AY + RCD +T DIS LYA +L    P++H +LP++ISK PL P +  GD 
Sbjct: 181 FSTADETIKAYESGRCDVFTSDISQLYAERLKLSNPADHAVLPEVISKEPLGPMVRHGDD 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           +W+++V WT +AM+ AEELGITQKN+++++K + NP+++R  G D   N GE LG+TKDW
Sbjct: 241 QWFDLVKWTLFAMIDAEELGITQKNVDEMAK-SNNPELKRVFGTD--GNFGEQLGVTKDW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             RI++ +GNYGE FDRN+G  S+L I RG N LW++GG+ YAPPIR
Sbjct: 298 VSRIVKAVGNYGESFDRNVGAGSKLGIARGLNRLWNQGGIQYAPPIR 344


>gi|260463341|ref|ZP_05811542.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium opportunistum WSM2075]
 gi|259030931|gb|EEW32206.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium opportunistum WSM2075]
          Length = 430

 Score =  365 bits (938), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 183/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + IL    L   + + +A+ L  +K +GF++CG++TGL GF+     GDW+G D D
Sbjct: 90  KHIAIGILGAAALGLMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 149

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F  +T
Sbjct: 150 FCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFIGVT 209

Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y+DGQGF++   K  G++S  QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E
Sbjct: 210 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 269

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY ++LT   P++HV+LP+IISK PL PA+ QGD +WY+I
Sbjct: 270 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 329

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT++A++ AEELGIT+ N++++ K++ +P+++R LG +  + IG  LG++ DW   I+
Sbjct: 330 VKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNIV 388

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 389 KAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 430


>gi|13476741|ref|NP_108310.1| ABC transporter, amino acid binding protein [Mesorhizobium loti
           MAFF303099]
 gi|14027502|dbj|BAB53771.1| ABC transporter, amino acid binding protein [Mesorhizobium loti
           MAFF303099]
          Length = 342

 Score =  365 bits (936), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 184/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + IL    L F + + +A+ L  +K +GF++CG++TGL GF+     GDW+G D D
Sbjct: 2   KHIAIGILGAATLGFMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F   T
Sbjct: 62  FCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFVGTT 121

Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y+DGQGF++   K  G++S  QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E
Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY ++LT   P++HV+LP+IISK PL PA+ QGD +WY+I
Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT++A++ AEELGIT+ N++++ K++ +P+++R LG +  + IG  LG++ DW   I+
Sbjct: 242 VKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGADLGVSNDWVVNIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 301 KAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 342


>gi|316934242|ref|YP_004109224.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Rhodopseudomonas palustris DX-1]
 gi|315601956|gb|ADU44491.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodopseudomonas palustris DX-1]
          Length = 338

 Score =  365 bits (936), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 171/325 (52%), Positives = 236/325 (72%), Gaps = 3/325 (0%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  S +A  L  +K RG L CG++ GL GF+     G+W G DVD CRA+++AIFDDPSK
Sbjct: 17  SVSSADAQTLKTVKDRGMLSCGVSQGLPGFSSPDDKGNWTGLDVDVCRAIAAAIFDDPSK 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F  I+Y+DGQGF+  K   +
Sbjct: 77  VKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGISYYDGQGFMAKKALKV 136

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S  +L+GASICVQ GTT E  +ADYFK +NMKY  I F   +E   AY   RCD +T D
Sbjct: 137 NSALELNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYETGRCDVFTSD 196

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
           +S LYA +L    P++H++LP++ISK PL P +  GD +W++IV WT + ++ AEELG+T
Sbjct: 197 VSQLYAQRLKLATPADHIVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFGLINAEELGVT 256

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
           QKN+++++K +  P+++R  G D   N+GE LGLTKDW  RII+  GNYGE F+RN+G+ 
Sbjct: 257 QKNVDEMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGSG 313

Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342
           S+L+I RG N LW+KGG+MYAPPIR
Sbjct: 314 SKLEIARGLNKLWNKGGIMYAPPIR 338


>gi|70728430|ref|YP_258179.1| general amino acid ABC transporter periplasmic binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68342729|gb|AAY90335.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 342

 Score =  365 bits (936), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++    +L  + F+   + L  ++K+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKSTLAAVTAATVLGMSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDATGKILGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +ID+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+ S  +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S LYA +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLYAQRSKLATPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE G+T KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  + L I RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGKSTPLAIDRGLNALWNNGGIQYAPPVR 342


>gi|149376724|ref|ZP_01894482.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Marinobacter algicola
           DG893]
 gi|149358963|gb|EDM47429.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Marinobacter algicola
           DG893]
          Length = 343

 Score =  365 bits (936), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 163/344 (47%), Positives = 229/344 (66%), Gaps = 5/344 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   V    L  +F  S ++ A+ L  +K++G L+CG+ +GL GF++    G+W G
Sbjct: 3   MKNAKSIAVGAAMLCGVFTASVASAATTLESVKEKGHLQCGVTSGLPGFSQPDDKGNWTG 62

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DVD CRA+++AIF D   +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F
Sbjct: 63  IDVDTCRAVAAAIFGDAKAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNF 122

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             + Y+DGQGF+++K  G+   +QL GA++C+QAGTTTEL L+DYF+A  M+Y PIVF+ 
Sbjct: 123 AGVNYYDGQGFLVNKGIGVDDATQLDGATVCIQAGTTTELNLSDYFRAKGMEYKPIVFDT 182

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E+    + + RCD  T D S L AL+     P    ILP+ ISK PL P + QGD +W+
Sbjct: 183 SEQTVQGFASGRCDVLTSDRSQLAALRSKLSDPDSAKILPNTISKEPLGPVVRQGDDQWF 242

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           NIV W     + AEELG+T  N++ + K + NP++QR LG D   ++G  LGL  D+  +
Sbjct: 243 NIVKWVLSVQINAEELGVTSANVDDMLK-SDNPNIQRLLGTD--GDMGAKLGLPADFGAK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            I+ +GNYGEM+DRN+G  + L + RG NALW++GG+MYAPP+R
Sbjct: 300 AIKQVGNYGEMYDRNVGPDTPLGLERGINALWTEGGVMYAPPVR 343


>gi|255264624|ref|ZP_05343966.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Thalassiobium sp. R2A62]
 gi|255106959|gb|EET49633.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Thalassiobium sp. R2A62]
          Length = 338

 Score =  365 bits (936), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L     +     L D+K RG L CG+ TGLVGFA   A+G+W+GFD
Sbjct: 1   MKKSVFLGALTVAGLAAGMSAAA--TLDDVKARGTLNCGVTTGLVGFAAPDASGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K+ G+SS   L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMAPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD +T D S L A + T + P +HV+LP+I+SK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPGDHVLLPEIVSKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  NI ++S  T NP+V R LG +    +G  LGL   W    I
Sbjct: 239 VRWTLNALITAEELGVTSANIGELSAGTNNPEVNRLLGTE--GELGGMLGLDAAWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA+W++GGL+Y+PP R
Sbjct: 297 MAGGNYGEIFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338


>gi|304396995|ref|ZP_07378875.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304355791|gb|EFM20158.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 341

 Score =  364 bits (935), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  IKK+GF++CGI+ GL GF+   A G + G 
Sbjct: 1   MKKMMLSTLIAAASLVGLAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRATAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ HKK G+ S  +L GA++C+Q+GT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQSGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GI  KN++Q++   T PD+  FLG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHFLGAE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 299 VKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341


>gi|330969254|gb|EGH69320.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 342

 Score =  364 bits (935), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330950965|gb|EGH51225.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae Cit 7]
          Length = 342

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|126668363|ref|ZP_01739321.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter
           sp. ELB17]
 gi|126627179|gb|EAZ97818.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter
           sp. ELB17]
          Length = 340

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 170/343 (49%), Positives = 237/343 (69%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   +  +   +     + S  A+ L D+K RG ++CG+ +GL GF++   NG+W G 
Sbjct: 1   MKKQLLLVAIATTLGGTLMAGSVQAATLDDVKSRGHVQCGVTSGLPGFSQPDENGNWTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+F    K+Q+ PL AKERF ALQS +IDILSRNT WTL R+ SLGL F 
Sbjct: 61  DVDTCRAVAAAVFGSADKVQFTPLTAKERFTALQSGEIDILSRNTTWTLTRDASLGLNFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y+DGQGF++ K  G+ +  QL GA+IC+QAGTTTEL LADYF+   MK++P+VF+  
Sbjct: 121 GTNYYDGQGFLVSKSLGVDNAEQLDGATICIQAGTTTELNLADYFRTKGMKFNPLVFDTS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  + + A RCD  T D S L AL+   + PS  VILP+IISK PL P + QGD +W+N
Sbjct: 181 EQTVSGFAAGRCDVLTSDRSQLAALRSKLEDPSSAVILPNIISKEPLGPVVRQGDDQWFN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +  + AEELG+TQ N++ + K +TNP++QR LG   + ++GE LG+  D+ +RI
Sbjct: 241 IVKWTLFVQINAEELGVTQANVSDM-KSSTNPEIQRLLGT--TGDMGEKLGVPADFGFRI 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGEM++RN+G  + L + RG NALW+ GG+MYAPP+R
Sbjct: 298 IQTVGNYGEMYERNVGPDTPLGLDRGLNALWNNGGIMYAPPVR 340


>gi|319784340|ref|YP_004143816.1| cationic amino acid ABC transporter periplasmic binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170228|gb|ADV13766.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 342

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 183/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + IL    L   + + +A+ L  +K +GF++CG++TGL GF+     GDW+G D D
Sbjct: 2   KHIAIGILGAATLGLMASAASAATLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F D S++++ PL+AKERF ALQS +IDILSRNT WT+ R+ +LGL F  +T
Sbjct: 62  FCRAVAAAVFGDGSRVKFTPLSAKERFTALQSGEIDILSRNTTWTINRDTALGLNFIGVT 121

Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y+DGQGF++   K  G++S  QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E
Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY ++LT   P++HV+LP+IISK PL PA+ QGD +WY+I
Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT++A++ AEELGIT+ N++++ K++ +P+++R LG +  + IG  LG++ DW   I+
Sbjct: 242 VKWTYFALLQAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMF+RN+G+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 301 KAVGNYGEMFERNVGSGSPLKIARGINALWTKGGLQYAPPIR 342


>gi|289678218|ref|ZP_06499108.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae FF5]
 gi|330975706|gb|EGH75772.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 342

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G++S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|66044325|ref|YP_234166.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63255032|gb|AAY36128.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 342

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLEKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|85716216|ref|ZP_01047190.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
 gi|85696888|gb|EAQ34772.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
          Length = 344

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 167/323 (51%), Positives = 232/323 (71%), Gaps = 3/323 (0%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   + L  +K+RG L CG+  GL GF+     G+W G DVD CRA+++ +F+DPSK++
Sbjct: 25  SAKAKTTLDVVKERGVLSCGVTQGLPGFSTPDDKGNWTGLDVDICRAIAAVVFNDPSKVK 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++PL+AK+RF+ALQ  +ID+LSR+T WTL R+ SLG  F  +TY+DGQGF++ K   ++S
Sbjct: 85  FVPLSAKDRFIALQWGEIDVLSRDTSWTLSRDTSLGGNFTGVTYYDGQGFLVRKSLKVNS 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L+ AS+CVQ GTT+E  LADYFK++ MKY  I F   +E   AY + RCD +T DIS
Sbjct: 145 ALELNSASVCVQTGTTSEQNLADYFKSNKMKYEVIAFGTADETLKAYESGRCDVFTSDIS 204

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            LYA +L    P++H +LP++ISK PL P + QGD +W++IV WT +AM+ AEELGITQK
Sbjct: 205 QLYAQRLKLLNPADHAVLPEVISKEPLGPMVRQGDDQWFDIVKWTLFAMINAEELGITQK 264

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+++ +K + NP+++R LG D   N GE LG+TKDW  RII+ +GNYGE FDRN+G  S 
Sbjct: 265 NVDEKAK-SENPEIKRVLGTD--GNFGEQLGVTKDWVSRIIKAVGNYGEAFDRNVGAGSP 321

Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342
           L I RG N LW++GG+ YAPPIR
Sbjct: 322 LGITRGLNRLWNQGGIQYAPPIR 344


>gi|320327255|gb|EFW83269.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330882636|gb|EGH16785.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 342

 Score =  364 bits (933), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|257487410|ref|ZP_05641451.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289628605|ref|ZP_06461559.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647200|ref|ZP_06478543.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298485800|ref|ZP_07003879.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302188404|ref|ZP_07265077.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae 642]
 gi|298159826|gb|EFI00868.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330867828|gb|EGH02537.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330887729|gb|EGH20390.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330988313|gb|EGH86416.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008998|gb|EGH89054.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 342

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|309785598|ref|ZP_07680229.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           dysenteriae 1617]
 gi|308926718|gb|EFP72194.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           dysenteriae 1617]
          Length = 341

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL  F+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAIANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|71735932|ref|YP_273398.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556485|gb|AAZ35696.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 342

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGVANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|75675721|ref|YP_318142.1| extracellular solute-binding protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74420591|gb|ABA04790.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 346

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 165/348 (47%), Positives = 238/348 (68%), Gaps = 11/348 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           K  F +I  ++       ++          + L  +K RG L CG++ GL GF+     G
Sbjct: 2   KCVFTAIFAIVAGISLQPASAQEQESAKAKTTLEAVKARGALSCGVSQGLPGFSAPDDKG 61

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSR+T WTL R+ SL
Sbjct: 62  NWTGLDVDICRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRDTTWTLSRDTSL 121

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G  F  +TY+DGQGF++ K   ++S  +L+ AS+CVQ GTT E  LADYFK++ MKY  I
Sbjct: 122 GANFTGVTYYDGQGFLIRKSLKVNSALELNSASVCVQTGTTNEQNLADYFKSNKMKYEVI 181

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F   +E   AY + RCD +T DIS LYA +L    P++H +LP++ISK P A  +  GD
Sbjct: 182 AFSTADETIKAYESGRCDVFTSDISQLYAQRLKLINPADHAVLPEVISKEPHATMVRHGD 241

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
            +W+++V WT +AM+ AEELGIT+KN++++++ + NP+++R  G D   N GE LG+TKD
Sbjct: 242 DQWFDLVKWTLFAMINAEELGITKKNVDEMAR-SENPELKRIFGTD--GNFGEQLGVTKD 298

Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           W  RII+ +GNYGE FDRN+G  S L I RG N LW++GG+MYAPPIR
Sbjct: 299 WVSRIIKAVGNYGESFDRNVGAGSPLGIARGLNKLWNQGGIMYAPPIR 346


>gi|330963203|gb|EGH63463.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 342

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTALTAFGVTGAANAGTTLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+ ++GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G++S  +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++V+LP++ISK PL P + + D EW+ I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|83592340|ref|YP_426092.1| lysine-arginine-ornithine-binding periplasmic protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83575254|gb|ABC21805.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Rhodospirillum rubrum ATCC 11170]
          Length = 340

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 169/343 (49%), Positives = 229/343 (66%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K               S S   AS L  +K RG + CG+N GL GFA     G W G 
Sbjct: 1   MKKMIAALAAFGAAGVIASGSAMAASTLDTVKSRGEVTCGVNNGLPGFALPDDKGHWTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+F D  K++++PLNAKERF ALQS +ID+LSRNT WT  R+ SLGL F 
Sbjct: 61  DVDICRAVAAAVFGDAKKVKFVPLNAKERFTALQSGEIDVLSRNTTWTQTRDASLGLIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DGQGF++ K+ G+SS  +L+GASIC+Q+GTTTEL LADYF+A+ M Y P+VF+  
Sbjct: 121 GVNYYDGQGFMVKKELGVSSAKELNGASICIQSGTTTELNLADYFRANAMTYSPVVFDTS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++    +   RCD  T D S LYAL++  + P   ++LP++ISK PL P + QGD +W N
Sbjct: 181 DQTVQGFAGGRCDVLTSDQSQLYALRIKLEDPKSAIVLPEVISKEPLGPMVRQGDDQWLN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +A + AEELG+T  N ++V   T + +V+R LG +    +G+ LGL  DW Y I
Sbjct: 241 IVRWSLFAQLNAEELGVTSANADEVKAGT-DQNVKRLLGTE--GEMGKQLGLGNDWAYAI 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGEMF+RN+G  S L+I RG NALW+KGG+ YAPPIR
Sbjct: 298 VKQVGNYGEMFERNIGKGSPLEIERGLNALWNKGGIQYAPPIR 340


>gi|90419549|ref|ZP_01227459.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336486|gb|EAS50227.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 334

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 170/337 (50%), Positives = 244/337 (72%), Gaps = 3/337 (0%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             ++L L +        +A  L  +K RG L+CG+NTGL GFA     G W+G D+D+C+
Sbjct: 1   MTAVLGLTVAGVAVSGASAQTLQTVKDRGVLRCGVNTGLPGFASQNDQGAWQGLDIDYCK 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+++A+F DPSK++Y PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F  + Y+D
Sbjct: 61  AIAAAVFGDPSKVEYSPLSAVQRFPALQNNEVDVLARNTTWTMDRDTTLGLTFAGVNYYD 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           GQGF++ K  G++S  +LSGA++CVQ+GTTTEL LADYF+ +NM+Y+P+V E   ++++A
Sbjct: 121 GQGFMVKKDLGVNSALELSGATVCVQSGTTTELNLADYFRTNNMEYNPVVIESQSDVNSA 180

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           Y + RCD  T D S L A +L      EH ILP+IISK PL PA+ QGDTEW+N+V WTH
Sbjct: 181 YDSGRCDVLTTDASGLAASRLEMGNADEHTILPEIISKEPLGPAVRQGDTEWFNVVKWTH 240

Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305
            A++ AEELG+TQ+N+  + K + NP+++R LG DK  N GE++GL++DW   II+ +GN
Sbjct: 241 NALLNAEELGVTQENVEDM-KTSENPEIRRLLGEDK--NFGESIGLSQDWAVNIIKAVGN 297

Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           YGE+F+RN+G  + L+I RG NALW+KGGL Y  PIR
Sbjct: 298 YGEIFERNIGVDTPLEIARGQNALWTKGGLQYGMPIR 334


>gi|28868466|ref|NP_791085.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967086|ref|ZP_03395235.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301386368|ref|ZP_07234786.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302060650|ref|ZP_07252191.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302133060|ref|ZP_07259050.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28851704|gb|AAO54780.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213927928|gb|EEB61474.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|331015252|gb|EGH95308.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 342

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTALAAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+ ++GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G++S  +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++V+LP++ISK PL P + + D EW+ I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330808961|ref|YP_004353423.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377069|gb|AEA68419.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 346

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 8/348 (2%)

Query: 1   MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K    S   +  L   S     +   + L ++KK+GF++CGI+ GL GF+   A G
Sbjct: 1   MKQEKKLLKSASTVACLTLGSVFAITAHAGATLDNVKKKGFVQCGISDGLPGFSYADAKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ GFDVD CRA+++A+F D  K++Y  L AKERF ALQS ++D+LSR+T WT  R+ ++
Sbjct: 61  EFHGFDVDVCRAVAAAVFGDAKKVKYTQLTAKERFTALQSGEVDMLSRSTTWTSSRDGAM 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G+ F  + Y+DGQGF+++KK G+ S  +L GA+ C+QAGT TEL L+DYF+++ MKY PI
Sbjct: 121 GIQFTNVAYYDGQGFLVNKKLGVKSARELDGATFCIQAGTVTELNLSDYFRSNGMKYTPI 180

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+  +E   A  + RCD  T D S LY  +L    P +  +LPD+ISK PL PA+ +GD
Sbjct: 181 TFDTSDESFKALESGRCDVLTTDQSQLYGQRLKLATPDDFAVLPDVISKEPLTPAVRRGD 240

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
            +W+ +V W+  AM+ AEELGIT KN+  + K + NPD+ R LG +    +G+ L L  D
Sbjct: 241 EDWFTVVRWSLAAMLNAEELGITSKNVADMVKSSKNPDIARLLGTE--GALGKDLNLPND 298

Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           W  +II  +GNYGE F+RNLG  S++KI RG NALWS+GGL YAPP+R
Sbjct: 299 WAAKIIAQVGNYGESFERNLGTGSDMKIKRGLNALWSQGGLQYAPPVR 346


>gi|330873115|gb|EGH07264.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 342

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTALTAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+ ++GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G++S  +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++V+LP++ISK PL P + + D EW+ I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|311695087|gb|ADP97960.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [marine bacterium
           HP15]
          Length = 347

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/340 (47%), Positives = 232/340 (68%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + I   +  F  + +  A+ L ++K++G L+CG+ +GL GF++    G+W G DVD
Sbjct: 11  KSIALGIALAVGTFSATGAMAATTLENVKEKGHLQCGVTSGLPGFSQPDEKGNWTGIDVD 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++AIF D + +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  + 
Sbjct: 71  TCRAVAAAIFGDANAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNFAGVN 130

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF+++K  G+   +QL GA+IC+QAGTTTEL L+DYF+A  M++ PIVF+  E+ 
Sbjct: 131 YYDGQGFLINKGIGVDDATQLDGATICIQAGTTTELNLSDYFRAKGMEFKPIVFDTSEQT 190

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              + A RCD  T D S L AL+     PS   ILP+ ISK PL P + QGD +W+NIV 
Sbjct: 191 VQGFAAGRCDVLTSDRSQLAALRSKLSDPSSAKILPNTISKEPLGPVVRQGDDQWFNIVK 250

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W  +A + AEELG+T  N + + K + NP++QR LG D   ++G  LGL  D+ Y+ ++ 
Sbjct: 251 WVLFAQINAEELGVTSANADDMLK-SDNPNIQRLLGTD--GDMGAKLGLPDDFGYQAVKL 307

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGEM+DRN+G  + L + RG NALW++GG+MYAPP+R
Sbjct: 308 VGNYGEMYDRNVGPDTPLGLDRGINALWTEGGIMYAPPVR 347


>gi|320325827|gb|EFW81888.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 342

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKLTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330962155|gb|EGH62415.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 342

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLKLPKDWVVKIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330999032|ref|ZP_08322757.1| general L-amino acid-binding periplasmic protein AapJ
           [Parasutterella excrementihominis YIT 11859]
 gi|329575774|gb|EGG57300.1| general L-amino acid-binding periplasmic protein AapJ
           [Parasutterella excrementihominis YIT 11859]
          Length = 340

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L  + L   + +    +L  +K    + CG+NT   GF+   + G+W G D
Sbjct: 1   MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRAL++A+  D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG  F  
Sbjct: 61  VDYCRALAAAVLGDANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ KK  + S  QL+GA+ICVQ+GT++E ++ADYFK+H MKY  ++F+  E
Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + RC  YT D+S L   +     P ++VILP++ISK PL P++ +GD EW+ I
Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A + AEE GITQ N +++ K +T+P+V+R LG     ++G+ LGL KDW+YRI+
Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RNLG ++ L +PRG N  W+ GG++YAPP+R
Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340


>gi|220926164|ref|YP_002501466.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219950771|gb|ACL61163.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 337

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 179/339 (52%), Positives = 242/339 (71%), Gaps = 3/339 (0%)

Query: 5   FFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              ++ L L +   +  +   + L  IK++GF+ CG N GL GF    A G W G DVDF
Sbjct: 1   MIAALGLSLSVCLLSGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLDVDF 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRAL++AIF+D ++++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ SLGL F  + +
Sbjct: 61  CRALAAAIFNDTTRVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTSLGLDFPSVNF 120

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ KK G++S  QL GASIC Q GTTTEL LADYF+A+ +KY  + F   +E  
Sbjct: 121 YDGQGFMVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEAVAFATADETF 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            AY + RCDA+T D S LYA +L    P ++V+LP++ISK PL PA+  GD++W +IV W
Sbjct: 181 KAYDSGRCDAFTTDASGLYAERLRASNPDDNVVLPEVISKEPLGPAVRHGDSQWADIVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           TH+AM+ AEE GITQ N++Q+ K T NPDV+R LG +     GE +GLT DW YRII+ +
Sbjct: 241 THFAMLNAEEAGITQANVDQMLKSTDNPDVKRILGTE--GKFGEGIGLTNDWAYRIIKLV 298

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RN+G  S+LKI RG NALWSKGGL Y PPIR
Sbjct: 299 GNYGEVFERNVGQGSQLKIQRGVNALWSKGGLQYGPPIR 337


>gi|312962948|ref|ZP_07777434.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
 gi|311282717|gb|EFQ61312.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
          Length = 342

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 159/344 (46%), Positives = 230/344 (66%), Gaps = 4/344 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K    ++   +IL     +   + L  I+K+GF++CG++ GL GF    + G   G
Sbjct: 1   MKHLKTSLAAVSVAVILGLAGSAHAGTTLDAIQKKGFIQCGVSDGLPGFGVPDSQGKMTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DVD C A+++A+F D SK+++  L AKERF ALQS +ID++SRNT WT  R+  +GL F
Sbjct: 61  IDVDVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVF 120

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +TY+DG GF+++ K G+++  QL+GA++C+QAGTTTEL ++DYF+ H MKY PI F+ 
Sbjct: 121 TGVTYYDGIGFLVNNKLGVTAAKQLNGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDT 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E      A RCD  T D S LYA ++    P E V+LP++ISK PL P + +GD EW+
Sbjct: 181 ADESAKGLEAGRCDVLTTDQSGLYAQRIKMAHPEEFVVLPEVISKEPLGPLVRKGDDEWF 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           +IV WT +AM+ AEE+GIT +N+ + ++ + NPDV R LG D     G+ L L +DW  +
Sbjct: 241 SIVKWTLFAMLNAEEMGITSQNVEEQARTSKNPDVARLLGAD--GEYGKDLKLRRDWVVQ 298

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++ +GNYGE+F+RN+G  S LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IVKQVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342


>gi|254780170|ref|YP_003064583.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039847|gb|ACT56643.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter asiaticus str. psy62]
          Length = 342

 Score =  362 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD
Sbjct: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP
Sbjct: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE
Sbjct: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI
Sbjct: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII
Sbjct: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR
Sbjct: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342


>gi|229592512|ref|YP_002874631.1| putative ABC transporter periplasmic solute binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229364378|emb|CAY52154.1| Putative ABC transport system, periplasmic solute binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 342

 Score =  362 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 161/341 (47%), Positives = 227/341 (66%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K    +I     L   S +     L  I+K+GF++CG++ GL GF    +NG   G DV
Sbjct: 4   FKTTLAAIGATAALGLASTAQAGVTLDAIQKKGFIQCGVSDGLPGFGVPDSNGKMTGIDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D C A+++A+F D SK+++  L AKERF ALQS +ID++SRNT WT  R+  +GL F  +
Sbjct: 64  DVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDMISRNTTWTSSRDSGMGLVFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           TY+DG GF+++ K G++   QL GA++C+QAGTTTEL ++DYF+ + MKY PI F+  +E
Sbjct: 124 TYYDGIGFLVNNKLGVTGAKQLDGATVCIQAGTTTELNVSDYFRTNGMKYTPITFDTADE 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                 A RCD  T D S LYA ++    P E V+LP++ISK PL P + +GD EW++IV
Sbjct: 184 SAKGLEAGRCDVLTTDQSGLYAQRIKMAHPDEFVVLPEVISKEPLGPLVRKGDDEWFSIV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT +AM+ AEE+GIT +N+ + +K T NPD+ R LG D     G+ L L KDW  +I++
Sbjct: 244 KWTLFAMLNAEEMGITSQNVEEQAKTTKNPDIARLLGAD--GEYGKDLKLRKDWVVQIVK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE+F+RN+G  S LKI RG NALW+ GG+ YAPP+R
Sbjct: 302 QVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342


>gi|317049795|ref|YP_004117443.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316951412|gb|ADU70887.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 341

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 164/343 (47%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVAAASLFAVAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D SK++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVFGDASKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ HKK G+ S  +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GI  KN++Q++   +NPD+   LG +   + G+ L L   W + I
Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQLAAKPSNPDMAHLLGAE--GDFGKDLKLDNKWAFNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341


>gi|294852106|ref|ZP_06792779.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|294820695|gb|EFG37694.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
          Length = 338

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 185/339 (54%), Positives = 247/339 (72%), Gaps = 3/339 (0%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFDVD+CR
Sbjct: 1   MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  I Y+D
Sbjct: 61  AVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120

Query: 126 GQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           GQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +
Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEAN 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V W
Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           TH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +
Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RN+G+ S LKI RG N  W+KGGL Y  P+R
Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNVQWNKGGLQYGIPVR 338


>gi|188532411|ref|YP_001906208.1| General L-amino ABC transporter binding protein [Erwinia
           tasmaniensis Et1/99]
 gi|188027453|emb|CAO95300.1| General L-amino ABC transporter binding protein [Erwinia
           tasmaniensis Et1/99]
          Length = 341

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVSAAALFSIANQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+  D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + + D +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDNDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GIT KN++ +S   +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSLSAKPSNPDMSHLLGAE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S+LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341


>gi|307942366|ref|ZP_07657717.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium
           sp. TrichSKD4]
 gi|307774652|gb|EFO33862.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium
           sp. TrichSKD4]
          Length = 371

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 176/342 (51%), Positives = 242/342 (70%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L    +   + S +A+ L D+K +GF++CG++ GL GF+   + G+W G D
Sbjct: 34  MSKKFLPLVLGA-AMGVAATSASAATLDDVKAKGFVQCGVSQGLPGFSNPDSQGNWTGLD 92

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIFDD + +++ PL+AKERF ALQS +ID+LSRNT WT+ R+ SLGL F  
Sbjct: 93  VDVCRAMAAAIFDDVNAVKFTPLSAKERFTALQSGEIDVLSRNTTWTMTRDTSLGLNFAG 152

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +LSGAS+C   GTTTEL +ADYF+A+NM Y  + FE+ +
Sbjct: 153 VNYYDGQGFMVRKDLGVTSALELSGASVCTNTGTTTELNVADYFRANNMPYEIVAFEKAD 212

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+ AAY A RCD YT D S LYA +L    P +H++LP+IISK PL P + QGD +W+N+
Sbjct: 213 EVVAAYDAGRCDVYTTDASGLYAQRLKLTNPGDHMVLPEIISKEPLGPVVRQGDDQWFNL 272

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  AM+ AEELG+T  N++ + K + NP V+R LG +     GE +GLT DW  RII
Sbjct: 273 VKWTLNAMINAEELGVTSANVDDM-KGSDNPSVKRLLGTE--GAYGENIGLTNDWAARII 329

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNYGE FD N+G  + L I RG NALWSKGG++YAPP+R
Sbjct: 330 KHVGNYGESFDANVGPDTPLGIARGVNALWSKGGVLYAPPVR 371


>gi|254512097|ref|ZP_05124164.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221535808|gb|EEE38796.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 346

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  +      + +  A  + D+K RG L CG++TGLVGFA   ANG W+GFD
Sbjct: 9   MKKSVILGVATIA--GLAAGAAAAGTVDDVKARGKLNCGVSTGLVGFAAPDANGVWQGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+LSRNT WT  R+  L   F  
Sbjct: 67  VALCRAVAAAVLGDANAVEFVPTTTKTRFTALASGEIDMLSRNTTWTYSRDADLKFEFTG 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GA +C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 127 VNYYDGQGFMVPKALGVGSAKELDGARVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D SAL + + T + P EH++LP+IISK PL P +  G+ EW ++
Sbjct: 187 EAQQQYLAGACDVYTTDASALASTRATFENPDEHILLPEIISKEPLGPLVRHGENEWGDV 246

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  NI+++S  + NP+V R LG +   N+GE +GL  DW  R I
Sbjct: 247 VRWTLNALITAEELGVTSANIDEMSAGSNNPEVDRLLGTE--GNLGEMMGLDADWAARAI 304

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F +N+G ++ + + RG NA W++GGL+Y+PP R
Sbjct: 305 KAGGNYGELFAKNIGEETPIGLARGLNAQWTEGGLLYSPPFR 346


>gi|170743936|ref|YP_001772591.1| cationic amino acid ABC transporter periplasmic binding protein
           [Methylobacterium sp. 4-46]
 gi|168198210|gb|ACA20157.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Methylobacterium sp. 4-46]
          Length = 340

 Score =  360 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 177/342 (51%), Positives = 239/342 (69%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L   +      +   + L  IK++GF+ CG N GL GF    A G W G D
Sbjct: 1   MKRIIAALALTASVCLTAGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRAL++A+F+D +K++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ +LGL F  
Sbjct: 61  VDFCRALAAAVFNDTTKVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTALGLDFPA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ KK G++S  QL GASIC Q GTTTEL LADYF+A+ +KY  + F   +
Sbjct: 121 VNFYDGQGFMVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEVVAFATSD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA+T D S LYA +L    P ++++LP++ISK PL PA+  GD++W +I
Sbjct: 181 ETFKAYDSGRCDAFTTDASGLYAERLRAANPDDNIVLPEVISKEPLGPAVRHGDSQWADI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WTHYAM+ AEE GITQ N++Q+ K T NPDV+R LG +     GE +GL+ DW YRII
Sbjct: 241 VRWTHYAMLNAEEAGITQANVDQMVKATDNPDVKRILGTE--GKFGEGIGLSNDWAYRII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALWSKGGL Y PPIR
Sbjct: 299 KLVGNYGEVFERNVGQGSPLKIQRGVNALWSKGGLQYGPPIR 340


>gi|56695433|ref|YP_165781.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria pomeroyi
           DSS-3]
 gi|56677170|gb|AAV93836.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria pomeroyi
           DSS-3]
          Length = 380

 Score =  359 bits (921), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    +    A  + D+K RG L CG+ TGLVGFA   +NG+WKGFD
Sbjct: 43  MKKSVFLG--ALTVAGMAAGVAAAGTMDDVKARGKLNCGVTTGLVGFAAPDSNGEWKGFD 100

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S ++D+L+RNT WT  R++ L   F  
Sbjct: 101 VALCRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFEFVG 160

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 161 VNYYDGQGFMVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 220

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 221 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDHEWGDV 280

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+V+AEE+GIT  NI+++S  T NP++ R LG +    +GE LGL  +W  R I
Sbjct: 281 VRWTLNALVSAEEMGITSANIDEMSAGTNNPEINRILGSE--GTLGEMLGLDAEWAKRAI 338

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F +N+G  + + + RG NA W+ GGL+Y+PP R
Sbjct: 339 KVGGNYGEVFAQNIGESTPIGLARGLNAQWTDGGLLYSPPFR 380


>gi|306841324|ref|ZP_07474033.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO2]
 gi|306288627|gb|EFM59963.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO2]
          Length = 339

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSVQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK + +   D+  PDV+RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-EADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|259906955|ref|YP_002647311.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224962577|emb|CAX54032.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283476749|emb|CAY72585.1| putative ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
 gi|310766170|gb|ADP11120.1| General L-amino ABC transporter binding protein [Erwinia sp.
           Ejp617]
          Length = 341

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+  D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + + D +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +AM+ AEE+GIT KN++ +S   +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLFAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDFGKDLKLGNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S+LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341


>gi|322834718|ref|YP_004214745.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321169919|gb|ADW75618.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 341

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++        +   +A   L  +KK+GF++CGI+ GL GF+   + G + G 
Sbjct: 1   MKKILLSTLIAAASFVTLAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADSKGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+F D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRAVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCLQAGTDTELNVADYFKANKMTYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W  
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWLA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +AM+ AEE+G+T +N+++++ + T PD+   LG  K+   G  L +  DW  +I
Sbjct: 241 IVRWSLFAMLNAEEMGVTSQNVDKLAANPTTPDMSNLLG--KTGTYGADLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE F+RN+G  SELKI RG NALW+KGG+ YAPP+R
Sbjct: 299 VKQVGNYGESFERNVGQGSELKIKRGQNALWNKGGIQYAPPVR 341


>gi|254712708|ref|ZP_05174519.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti M644/93/1]
 gi|254715778|ref|ZP_05177589.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti M13/05/1]
 gi|261217539|ref|ZP_05931820.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261320414|ref|ZP_05959611.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
 gi|260922628|gb|EEX89196.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261293104|gb|EEX96600.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
          Length = 339

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SA YA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASAFYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|90578887|ref|ZP_01234697.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Vibrio angustum S14]
 gi|90439720|gb|EAS64901.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Vibrio angustum S14]
          Length = 342

 Score =  359 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 160/341 (46%), Positives = 231/341 (67%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 + L      F + +   + L  + K+G+++CG++ GL GF+   A G W+G DV
Sbjct: 4   KLSVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +FC+A+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  +
Sbjct: 64  EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DGQGF++ K  GI S  +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+   +
Sbjct: 124 NYYDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               + + RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+N+V
Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNVV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT + M+ AEE  +T  N+++++K++ +P+++R +G+D     G+ LGL  DW Y+II+
Sbjct: 244 RWTLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE F+R +G  S LKI RG NALW+ GG+ YAPPIR
Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342


>gi|89073072|ref|ZP_01159619.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium sp. SKA34]
 gi|89051290|gb|EAR56746.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium sp. SKA34]
          Length = 342

 Score =  359 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 161/341 (47%), Positives = 232/341 (68%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 + L      F + +   + L  + K+G+++CG++ GL GF+   A G W+G DV
Sbjct: 4   KLSVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +FC+A+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  +
Sbjct: 64  EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DGQGF++ K  GI+S  +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+   +
Sbjct: 124 NYYDGQGFMVKKDMGITSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               + + RCD  T D S LYAL+L    PS  V+LP+IISK PL P + QGD +W+N+V
Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPSSAVVLPEIISKEPLGPVVRQGDDQWFNVV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT + M+ AEE  +T  N+++++K++ +P+++R +G+D     G+ LGL  DW Y+II+
Sbjct: 244 RWTLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE F+R +G  S LKI RG NALW+ GG+ YAPPIR
Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342


>gi|148557994|ref|YP_001257868.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|225629405|ref|ZP_03787438.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti str. Cudo]
 gi|225686709|ref|YP_002734681.1| amino-acid ABC transporter-binding protein yhdW [Brucella
           melitensis ATCC 23457]
 gi|254705588|ref|ZP_05167416.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           pinnipedialis M163/99/10]
 gi|254710821|ref|ZP_05172632.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           pinnipedialis B2/94]
 gi|256015709|ref|YP_003105718.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|256043818|ref|ZP_05446739.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256058889|ref|ZP_05449103.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           neotomae 5K33]
 gi|256157396|ref|ZP_05455314.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti M490/95/1]
 gi|256253625|ref|ZP_05459161.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti B1/94]
 gi|256262158|ref|ZP_05464690.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           2 str. 63/9]
 gi|260167705|ref|ZP_05754516.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|260564999|ref|ZP_05835484.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           1 str. 16M]
 gi|261220761|ref|ZP_05935042.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261312993|ref|ZP_05952190.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261318389|ref|ZP_05957586.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261322825|ref|ZP_05962022.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261757141|ref|ZP_06000850.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99]
 gi|265990242|ref|ZP_06102799.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265995884|ref|ZP_06108441.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|294853902|ref|ZP_06794574.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|148369279|gb|ABQ62151.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|225615901|gb|EEH12950.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti str. Cudo]
 gi|225642814|gb|ACO02727.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           melitensis ATCC 23457]
 gi|255998369|gb|ACU50056.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260152642|gb|EEW87735.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           1 str. 16M]
 gi|260919345|gb|EEX85998.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261297612|gb|EEY01109.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261298805|gb|EEY02302.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261302019|gb|EEY05516.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261737125|gb|EEY25121.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99]
 gi|262550181|gb|EEZ06342.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|263000911|gb|EEZ13601.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263091858|gb|EEZ16180.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           2 str. 63/9]
 gi|294819557|gb|EFG36557.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|326411105|gb|ADZ68169.1| amino-acid ABC transporter-binding protein yhdW [Brucella
           melitensis M28]
 gi|326554396|gb|ADZ89035.1| amino-acid ABC transporter-binding protein yhdW [Brucella
           melitensis M5-90]
          Length = 339

 Score =  359 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|192291210|ref|YP_001991815.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
 gi|192284959|gb|ACF01340.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
          Length = 353

 Score =  359 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 241/356 (67%), Gaps = 17/356 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVG 46
           M +    V++   + L                        L  +++ G L CG++ GL G
Sbjct: 1   MKRVSILVALAIAVGLSPQVAGAQNPKAGSTAGAEKKKTTLEIVRENGALSCGVSQGLPG 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F+     G+W G DVD CRA+++A+FDDPSK++++PL+AK+RF ALQS +ID+LSRNT W
Sbjct: 61  FSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTW 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           TL R+ SLG++F  ++Y+DGQGF+  K   ++S  +L+GASICVQ GTT E  +ADYFK 
Sbjct: 121 TLSRDTSLGVSFAGVSYYDGQGFMAKKSLKVNSALELNGASICVQTGTTNEQNVADYFKG 180

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +NMKY  I F   +E   AY + RCD +T D+S LYA +L    P++H +LP++ISK PL
Sbjct: 181 NNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLYAQRLKLATPADHAVLPEVISKEPL 240

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
            P +  GD +W++IV WT +A+V AEELG+TQKN+++++K +  P+++R  G D   N+G
Sbjct: 241 GPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVDEMAK-SDKPELKRVFGTD--GNLG 297

Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           E LGLTKDW  RI++  GNYGE F+RN+G+ S+L+I RG N LW+KGG+MYAPPIR
Sbjct: 298 EQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEIARGLNKLWNKGGIMYAPPIR 353


>gi|296272121|ref|YP_003654752.1| cationic amino acid ABC transporter periplasmic binding protein
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096296|gb|ADG92246.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Arcobacter nitrofigilis DSM 7299]
          Length = 338

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 173/340 (50%), Positives = 228/340 (67%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L +  L   S  ++A  L    K G L CG+NTGL GFA   ++G WKG DVD
Sbjct: 2   KLLKTLSLSIAALAIASTVSSADTLDTTIKNGKLSCGLNTGLPGFAAPDSDGVWKGIDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++A+  D +K++Y  LNAKERF ALQS +ID+L+RNT WT  R+ SLGL F  + 
Sbjct: 62  VCRAVAAAVLGDATKVKYAHLNAKERFTALQSGEIDVLARNTTWTATRDTSLGLNFTGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ KK G+ S  +L GA+ C+QAGTTTEL L DYFK+HNMKY PI ++   + 
Sbjct: 122 YYDGQGFLVSKKLGVKSAKELDGATFCIQAGTTTELNLTDYFKSHNMKYTPITYDTSAQT 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              +   RCDA T D S LYAL+     PS  ++LP+IISK PL P + QGD +W+NIV 
Sbjct: 182 IQGFEEGRCDALTSDSSQLYALRTQLKNPSSAIVLPEIISKEPLGPVVRQGDDKWFNIVK 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT  AM+ AE+LG+  KN++++ K +TNP++QR LG+  + +IG+ LGL   W Y II+ 
Sbjct: 242 WTEIAMLNAEDLGVNSKNVDEMLK-STNPNIQRLLGV--TGDIGKNLGLDPKWAYNIIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+RN+G  S LKI RG NALW  GGL Y  PIR
Sbjct: 299 VGNYGESFERNVGQGSPLKIERGLNALWKNGGLQYGAPIR 338


>gi|326408764|gb|ADZ65829.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis M28]
 gi|326538482|gb|ADZ86697.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis M5-90]
          Length = 338

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 185/339 (54%), Positives = 246/339 (72%), Gaps = 3/339 (0%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFDVD+CR
Sbjct: 1   MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  I Y+D
Sbjct: 61  AVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120

Query: 126 GQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           GQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE++EE +
Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEKIEEAN 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V W
Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           TH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +
Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 338


>gi|306846158|ref|ZP_07478720.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO1]
 gi|306273409|gb|EFM55270.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO1]
          Length = 339

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PDV+RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|158338716|ref|YP_001519893.1| lysine-arginine-ornithine-binding periplasmic protein, putative
           [Acaryochloris marina MBIC11017]
 gi|158308957|gb|ABW30574.1| lysine-arginine-ornithine-binding periplasmic protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 343

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 146/346 (42%), Positives = 217/346 (62%), Gaps = 7/346 (2%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M + F       ++ L +   +S       L  +  +  ++CGI+  L GF+ V   G++
Sbjct: 1   MIRKFSSLCAALLVALTLGSCSSSEAAGGRLQQVLAQKKVRCGISGELPGFSFVDEKGNY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DVD CRA+++A+FDDP  ++Y PLNAKERF A+Q+ ++D+LSRNT WTL R+ S+ +
Sbjct: 61  SGLDVDICRAIAAALFDDPDAVEYRPLNAKERFAAVQTGEVDVLSRNTTWTLDRDSSVRM 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF P+ ++DGQG ++    GI ++      ++C Q GTT E  L D  +   + Y  +V+
Sbjct: 121 AFAPVVFYDGQGVMVKADSGIKTLKDFKNRTVCTQTGTTNEKNLKDQMRKRKVDYKLVVY 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E +    AAY   RCD  T D S L + +    +P  H IL +++SK PLAPA+  GD E
Sbjct: 181 EDINSAYAAYAEGRCDGVTSDRSQLISRRTALPKPESHTILDEVLSKEPLAPAVADGDVE 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W ++V W   A V AEELGI Q N+   +K + +P V+RFLG ++   +G++LGL+ D+ 
Sbjct: 241 WADVVRWVVNATVEAEELGIQQDNLASFAK-SEDPVVKRFLGTEE--ELGKSLGLSPDFA 297

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            RI++H+GNYGE++DRNLG  ++L +PRG N LWSKGGLMY+PP R
Sbjct: 298 ARIVKHVGNYGEIYDRNLGPNTKLNLPRGQNQLWSKGGLMYSPPFR 343


>gi|62317227|ref|YP_223080.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269208|ref|YP_418499.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|189022489|ref|YP_001932230.1| Solute-binding protein/glutamate receptor [Brucella abortus S19]
 gi|237816787|ref|ZP_04595779.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           abortus str. 2308 A]
 gi|254698509|ref|ZP_05160337.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254731957|ref|ZP_05190535.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 4
           str. 292]
 gi|260544464|ref|ZP_05820285.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC
           8038]
 gi|260759731|ref|ZP_05872079.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260762971|ref|ZP_05875303.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|62197420|gb|AAX75719.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939482|emb|CAJ12452.1| Solute-binding protein/glutamate receptor:Bacterial extracellular
           solute-binding protein, family 3 [Brucella melitensis
           biovar Abortus 2308]
 gi|189021063|gb|ACD73784.1| Solute-binding protein/glutamate receptor [Brucella abortus S19]
 gi|237787600|gb|EEP61816.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           abortus str. 2308 A]
 gi|260097735|gb|EEW81609.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC
           8038]
 gi|260670049|gb|EEX56989.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260673392|gb|EEX60213.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
          Length = 339

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 164/342 (47%), Positives = 225/342 (65%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LS  T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADY  AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|256029203|ref|ZP_05442817.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           pinnipedialis M292/94/1]
 gi|265986189|ref|ZP_06098746.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
 gi|264658386|gb|EEZ28647.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
          Length = 339

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALY  +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYVQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|294084021|ref|YP_003550778.1| glutamate/glutamine/aspartate/asparagine ABC transporter
           periplasmic substrate-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663593|gb|ADE38694.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 338

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 156/323 (48%), Positives = 209/323 (64%), Gaps = 2/323 (0%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +  AS L D+K RG +KC  +TGL GFA     G+W GFDVDFCRA ++A+  D  KI 
Sbjct: 18  STAQASTLEDVKSRGEVKCVFSTGLAGFAFPDDKGNWTGFDVDFCRATAAAVLGDAQKIG 77

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P   + RF  L + + D+L RNT  T  R++ + L F  + Y+DGQGF+  K  GISS
Sbjct: 78  PVPATTQNRFTVLNAGEADVLWRNTTITFSRDVGVKLTFLGVNYYDGQGFMAKKSLGISS 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L GAS+C+Q GTTTEL LADYF+++NM Y  +      E    Y + R D  T D S
Sbjct: 138 ALELDGASVCIQTGTTTELNLADYFRSNNMTYEAVPVADSAEARECYNSGRGDVLTTDAS 197

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           AL + +   + P +H++LP+IISK PL PA+ QGD EW +IV W  YA +TAEELGITQ 
Sbjct: 198 ALSSQRAAMENPDDHMVLPEIISKEPLGPAVRQGDDEWADIVRWVLYATITAEELGITQA 257

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+N +   T NP+++RFLG++   N+G  LGL+ DW   II  +GNYGE+F+RN+G  + 
Sbjct: 258 NVNTIGATTNNPEIKRFLGLEA--NLGPELGLSNDWAKNIIAQVGNYGEIFERNIGVNTP 315

Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342
           L I RG NALW+ GGL Y+PP R
Sbjct: 316 LGIGRGVNALWTDGGLQYSPPFR 338


>gi|254690732|ref|ZP_05153986.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 6
           str. 870]
 gi|254695963|ref|ZP_05157791.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 3
           str. Tulya]
 gi|256255914|ref|ZP_05461450.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 9
           str. C68]
 gi|260756304|ref|ZP_05868652.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260882128|ref|ZP_05893742.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|261216393|ref|ZP_05930674.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|297249275|ref|ZP_06932976.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|260676412|gb|EEX63233.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260871656|gb|EEX78725.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|260918000|gb|EEX84861.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|297173144|gb|EFH32508.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 339

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADY  AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|222148880|ref|YP_002549837.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735866|gb|ACM36829.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 341

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 176/342 (51%), Positives = 242/342 (70%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L      F + + +A  L D+K +GF++CG++ G+ GF+     GDW G D
Sbjct: 1   MKKTLLSVALGAAAFGFGASAASADTLSDVKAKGFVQCGVSQGIPGFSAPNDKGDWSGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CR +++A+F D SK ++ P++AK+RF ALQS +ID+L+RNT WT+ R+ SLG  FR 
Sbjct: 61  VDYCRGIAAAVFGDASKAKFTPVSAKDRFPALQSGEIDVLTRNTTWTISRDTSLGFNFRT 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K   + S  +LSGA++CVQ GTTTEL LADYFKA+ +KY+P+VFE+ +
Sbjct: 121 VNYYDGQGFMAKKSLNVKSALELSGAAVCVQTGTTTELNLADYFKANGLKYNPVVFEKED 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  AAY A RCD YT D S LYA++L    P ++V+LP++ISK PL PA+ QGD +W+++
Sbjct: 181 DATAAYDAGRCDVYTTDQSGLYAIRLKLKNPDDNVVLPEVISKEPLGPAVRQGDDKWFDV 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYAMV AEE G+T KNI+ +  +   PD++R LG +  S +G  LGL +DW Y +I
Sbjct: 241 VSWVHYAMVNAEEAGVTSKNIDDLKAN-GGPDIKRMLGAEAGSKLGTDLGLKEDWAYNVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALWSKGGL Y PPIR
Sbjct: 300 KLVGNYGEVFDRNVGVGSPLKIARGVNALWSKGGLQYGPPIR 341


>gi|153008737|ref|YP_001369952.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151560625|gb|ABS14123.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 339

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 223/342 (65%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKIVLGSLLAAGFAMSAQSGAQADTLSTVKERGKINCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  GI S  +L GAS+C + GTTTE   AD+F A+++KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGIDSALKLDGASVCTEQGTTTEQNAADFFSANSIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P    +LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEELGITQ + +    ++  PDV+RFLG +   + G+ LGL   W Y ++
Sbjct: 241 VRWTLFAMLEAEELGITQASADA-DLNSKKPDVRRFLGSE--GDSGQQLGLEPKWAYNVV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 SKIGNYGEMFERTIGKGSLLKIDRGINALWNKGGLMYAPPVK 339


>gi|39935626|ref|NP_947902.1| ABC transporter periplasmic amino acid binding protein aapJ-1
           [Rhodopseudomonas palustris CGA009]
 gi|39649479|emb|CAE28001.1| ABC transporter, periplasmic amino acid binding protein aapJ-1
           [Rhodopseudomonas palustris CGA009]
          Length = 338

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 169/320 (52%), Positives = 235/320 (73%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  L  +K RG L CG++ GL GF+     G+W G DVD CRA+++A+FDDPSK++++P
Sbjct: 22  DAQTLKTVKDRGMLSCGVSQGLPGFSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVP 81

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F  ++Y+DGQGF+  K   ++S  +
Sbjct: 82  LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFMAKKSLKVNSALE 141

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+GASICVQ GTT E  +ADYFK +NMKY  I F   +E   AY + RCD +T D+S LY
Sbjct: 142 LNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLY 201

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +L    P++H +LP++ISK PL P +  GD +W++IV WT +A+V AEELG+TQKN++
Sbjct: 202 AQRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVD 261

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +++K +  P+++R  G D   N+GE LGLTKDW  RI++  GNYGE F+RN+G+ S+L+I
Sbjct: 262 EMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEI 318

Query: 323 PRGYNALWSKGGLMYAPPIR 342
            RG N LW+KGG+MYAPPIR
Sbjct: 319 ARGLNKLWNKGGIMYAPPIR 338


>gi|23500674|ref|NP_700114.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|163845062|ref|YP_001622717.1| hypothetical protein BSUIS_B0940 [Brucella suis ATCC 23445]
 gi|23464321|gb|AAN34119.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|163675785|gb|ABY39895.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 339

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|256111139|ref|ZP_05452175.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           melitensis bv. 3 str. Ether]
 gi|265992652|ref|ZP_06105209.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|262763522|gb|EEZ09554.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
          Length = 339

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CGI+ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGISQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|308188311|ref|YP_003932442.1| amino-acid ABC transporter-binding protein yhdW precursor [Pantoea
           vagans C9-1]
 gi|308058821|gb|ADO10993.1| Putative amino-acid ABC transporter-binding protein yhdW precursor
           [Pantoea vagans C9-1]
          Length = 341

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 227/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  IKK+GF++CGI+ GL GF+   A G + G 
Sbjct: 1   MKKMMLSTLIAAASLVAIAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPLVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GI  KN++Q++   T PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHLLGAE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341


>gi|292486754|ref|YP_003529624.1| putative ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|292900844|ref|YP_003540213.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291200692|emb|CBJ47825.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291552171|emb|CBA19208.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
 gi|312170822|emb|CBX79082.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 341

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADANGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+  D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + + D +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GIT KN++ +S   +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDYGKDLKLGNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S+LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIVRGQNALWNNGGIQYAPPVR 341


>gi|92112255|ref|YP_572183.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91795345|gb|ABE57484.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 342

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 162/341 (47%), Positives = 224/341 (65%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
              F V++   ++L   + ++ A+ L D+K+RG L CG+N GL GF+   A+G+W+G DV
Sbjct: 4   KNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           + CR ++SAIF DP  + + PL AKERF ALQS +ID+LSRNT WT  R+ SLGL F   
Sbjct: 64  ETCRGIASAIFGDPDNVVFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTAT 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           T++DGQGF++ K   I S+  L+GASIC+Q+GTT EL LADYF + +++   + F+  ++
Sbjct: 124 TFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHELNLADYFPSRDIEIKTVTFDTPDQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               +   RCD  T D S L AL+L    P    IL  +ISK PL P + QGD +W +IV
Sbjct: 184 TAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWLDIV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT +AMV AEE+G+   N++++  +  NP V R LG D   N GE LGL  DW Y II+
Sbjct: 244 QWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKD--GNYGEQLGLPNDWAYNIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++GNYGE+F   +G  S LKI RG NALW++GG++YAPPIR
Sbjct: 302 NVGNYGEVFATTVGEDSPLKIQRGMNALWNEGGILYAPPIR 342


>gi|239832600|ref|ZP_04680929.1| amino-acid ABC transporter-binding protein yhdW precursor
           [Ochrobactrum intermedium LMG 3301]
 gi|239824867|gb|EEQ96435.1| amino-acid ABC transporter-binding protein yhdW precursor
           [Ochrobactrum intermedium LMG 3301]
          Length = 339

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 221/342 (64%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+L             A  L  +K+RG L CG++ G+ GF+     G W GFD
Sbjct: 1   MKNILLGSLLAAGFALSAQGGAQADTLSTVKERGKLNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGILFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GAS+C + GTTTE   ADYF A+N+KY P+V +  +
Sbjct: 121 TAYYDGQGFLIRKDLGVDSALKLDGASVCTEQGTTTEQNAADYFSANNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P    +LP++ISK PL PA+ QGD +W+N+
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNV 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELG+TQ +  +   ++  PDV+RFLG +     G+ LGL   W Y ++
Sbjct: 241 VRWTLFALLEAEELGVTQASA-EADLNSKKPDVRRFLGSEGDG--GQQLGLEPKWAYNVV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 STIGNYGEMFERTIGKGSLLKIDRGLNALWNKGGLMYAPPVK 339


>gi|254700150|ref|ZP_05161978.1| hypothetical protein Bsuib55_04721 [Brucella suis bv. 5 str. 513]
 gi|261750642|ref|ZP_05994351.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261740395|gb|EEY28321.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
          Length = 339

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGAVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|154248466|ref|YP_001419424.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154162551|gb|ABS69767.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 336

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 158/343 (46%), Positives = 231/343 (67%), Gaps = 8/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F      + L   + + NA+ L ++K RG + CG++ GL GF+      +W G D
Sbjct: 1   MKRILF----AAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++AIF+DP+K+++ PL+AK+RF AL S  ID+LSRNT WT+ R+ +LG  F  
Sbjct: 57  VDFCRAIAAAIFNDPAKVKFSPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAG 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERV 179
           + Y+DGQGF++ K  G+ S  +L GASICVQ GT+ EL ++D+F+++NMK    I F  +
Sbjct: 117 VIYYDGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFFRSNNMKNGEVIAFGTI 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   AY + RCD +T D S L A++L     ++HVILP+ ISK PL P +  GD +W++
Sbjct: 177 DETVKAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFD 236

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W ++A++ AEELG+TQKN+++   ++ NPDV+R LG D     GE +GLT DW  RI
Sbjct: 237 LVKWVYFALLNAEELGVTQKNVDEQV-NSQNPDVKRLLGTD--GKYGEGIGLTADWAVRI 293

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE++DRN+G  + L I RG N LW+KGG+ Y  P+R
Sbjct: 294 IKATGNYGEIYDRNVGPATPLGIERGLNNLWNKGGIQYGMPVR 336


>gi|161621000|ref|YP_001594886.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           canis ATCC 23365]
 gi|260567799|ref|ZP_05838268.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str.
           40]
 gi|161337811|gb|ABX64115.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           canis ATCC 23365]
 gi|260154464|gb|EEW89545.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str.
           40]
          Length = 339

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDRGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|312115908|ref|YP_004013504.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221037|gb|ADP72405.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 338

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 164/342 (47%), Positives = 235/342 (68%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  + ++ C + L        A  L D+K RG L CG+  GL GF+   A+G+W G D
Sbjct: 1   MKR--YGTLYCALALMLFCAGARAGTLDDVKARGKLNCGVTQGLAGFSSADASGNWAGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++AIFDDPSK+ ++PL++K+RF ALQS +ID+LSR + WT+  + +LG++F  
Sbjct: 59  VDFCRAVAAAIFDDPSKVNFVPLSSKQRFTALQSGEIDVLSRVSTWTMQNDTALGISFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y DGQG ++ KK  + S  +LSGA +C   GTTTEL +AD+F++ +M Y  + FE+ +
Sbjct: 119 VIYHDGQGLMVRKKLEVQSALELSGAEVCTNTGTTTELNIADFFRSRSMPYRIVAFEKSD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY A RCD Y+ D S+L A ++   +P EHVILPD+ISK PLAPA+ Q D +W ++
Sbjct: 179 EALKAYEAERCDVYSTDASSLSAQRVKLAQPDEHVILPDLISKEPLAPAVRQNDPQWESL 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEEL +T+ N +++S+    P V+R LG +   + G ALGL KDW  + I
Sbjct: 239 VRWTLFALINAEELAVTKANADKLSRTDAAPGVRRLLGAES--DYGRALGLDKDWALKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+FDRNLG QS LKI RG N LW+ GG+++APP+R
Sbjct: 297 RAVGNYGEIFDRNLGQQSPLKIERGLNKLWNNGGILFAPPVR 338


>gi|315122673|ref|YP_004063162.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496075|gb|ADR52674.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 342

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 274/342 (80%), Positives = 310/342 (90%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MY++FF+SILCLI L FT+F T ASIL +IKKRGFLKCGINTGL GF+E++ANGDWKGFD
Sbjct: 1   MYRNFFISILCLIGLTFTNFPTYASILQNIKKRGFLKCGINTGLTGFSEIQANGDWKGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+ALS+AIFDD SK+QYLPLNAKERF++LQSKQIDILSRNTDWTLLRE  LGLAFRP
Sbjct: 61  VDFCKALSAAIFDDSSKVQYLPLNAKERFISLQSKQIDILSRNTDWTLLRETKLGLAFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITYFDGQG +M+KK G+SS  QLS ASICVQAGTTTE TLADYFKAHNMKYHPIVFERVE
Sbjct: 121 ITYFDGQGLMMYKKSGVSSALQLSDASICVQAGTTTEKTLADYFKAHNMKYHPIVFERVE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EIDAAYR+HRCD YTGD SALYAL+L+ D P+EHVIL DIISKSPL PAI+QGD+EW NI
Sbjct: 181 EIDAAYRSHRCDVYTGDKSALYALRLSTDNPNEHVILKDIISKSPLGPAILQGDSEWSNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWTHYA+V AEELGITQ N++Q    T +PD++RFLGIDKS+NIGE+LGL+KDW Y+II
Sbjct: 241 VSWTHYALVNAEELGITQSNVDQKRLTTNDPDMKRFLGIDKSANIGESLGLSKDWAYQII 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +HMGNYGE+FDRNLG+QS LKIPR YNALWSKGG+MYAPPIR
Sbjct: 301 KHMGNYGEIFDRNLGSQSALKIPREYNALWSKGGIMYAPPIR 342


>gi|156741438|ref|YP_001431567.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM
           13941]
 gi|156232766|gb|ABU57549.1| extracellular solute-binding protein family 3 [Roseiflexus
           castenholzii DSM 13941]
          Length = 389

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 153/319 (47%), Positives = 210/319 (65%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  I+ RG L CG+N+ + GF  V   G + GFD+D+C+AL++AIF+D SKI+Y PL
Sbjct: 71  GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKIEYRPL 130

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A++RF ALQS +ID+L RNT WTL R+   G  F   T++DGQG ++ K   I+ +  L
Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +GA+ICVQ GTTTEL LAD   A N+ Y P  FE      AAY   RCDA T D S L +
Sbjct: 191 NGATICVQKGTTTELNLADQMNARNLAYTPATFEDANSTFAAYAEERCDAVTTDKSGLVS 250

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P +HVIL   +SK PL P + QGD +W++IV W  +A   AEE GIT +N++Q
Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWAVFATFAAEEFGITSQNVDQ 310

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
           + +  T P+V+R LG D + ++G  LGL+KDW   +I+ +GNYGE++DRNLG  ++  IP
Sbjct: 311 LKETDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKAVGNYGEIYDRNLGPNTKTAIP 370

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG N L+++GGL+YAPP R
Sbjct: 371 RGINNLYTQGGLLYAPPFR 389


>gi|86750029|ref|YP_486525.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           HaA2]
 gi|86573057|gb|ABD07614.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris HaA2]
          Length = 337

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 167/322 (51%), Positives = 231/322 (71%), Gaps = 3/322 (0%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S  A  L  +K RG L CG++ GL GF+     G+W G DVD CR +++AIFDDPSK+++
Sbjct: 19  SAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKF 78

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F  ++Y+DGQGF++ K   ++S 
Sbjct: 79  VPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSA 138

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            +L+ AS+CVQ GTT E  +ADYFK +NMKY  I F   +E   AY + RCD +T D+S 
Sbjct: 139 LELNSASVCVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQ 198

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           LYA +L    P++HV+LP++ISK PL P +  GD +W+++V WT +AM+ AEELG+TQ N
Sbjct: 199 LYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVKWTLFAMINAEELGVTQSN 258

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           + +++K +  P+++R  G D   N+GE LGLTKDW  RII+  GNYGE F+RN+G  S+L
Sbjct: 259 VAEMAK-SDKPELRRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKL 315

Query: 321 KIPRGYNALWSKGGLMYAPPIR 342
           +I RG N  W+KGG+MYAPPIR
Sbjct: 316 EIARGLNKPWNKGGIMYAPPIR 337


>gi|254720190|ref|ZP_05182001.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. 83/13]
 gi|265985199|ref|ZP_06097934.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306838669|ref|ZP_07471505.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. NF 2653]
 gi|264663791|gb|EEZ34052.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306406312|gb|EFM62555.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. NF 2653]
          Length = 339

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  LG+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGLGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPEAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PDV+RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ALVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|146278537|ref|YP_001168696.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556778|gb|ABP71391.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 338

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L     S     L D+K RG L CG++TGL GF+   ANG+W GFD
Sbjct: 1   MKKSVFLGTLTVAGLAAGLGSAA--TLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D +K++++P   + RF AL S ++D+L+RN+ WT  R+  L L F  
Sbjct: 59  VALCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+FK +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E +  Y A  CDAYT D S L A +     P  HVILP+IISK PL PA+  GD EW ++
Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHVILPEIISKEPLGPAVRHGDNEWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEE G+T  N+ +++ ++ NP+++R LG++   ++G  + L KDW  R I
Sbjct: 239 VGWTLNALIAAEEYGVTSTNMEELAANSPNPEIRRLLGVE--GDLGPMIRLDKDWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F   +G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 SVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338


>gi|283788089|ref|YP_003367954.1| Putative ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
 gi|282951543|emb|CBG91242.1| Putative ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
          Length = 337

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 156/339 (46%), Positives = 228/339 (67%), Gaps = 3/339 (0%)

Query: 5   FFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              ++    +L      T+A   L  +KK+GF++CGI+ GL GF+   A+G + G DVD 
Sbjct: 1   MIATLAAAGVLIAVVNQTHAGATLDAVKKKGFVQCGISDGLPGFSYADADGKFSGIDVDV 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CR +++A+  D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F  +TY
Sbjct: 61  CRGVAAAVLGDDSKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFTGVTY 120

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E  
Sbjct: 121 YDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESA 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A  + RCD    D S LYAL++    P E ++LP++ISK PL P + +GD EW+ IV W
Sbjct: 181 KALESGRCDTLASDQSQLYALRIKLSNPGEWIVLPEVISKEPLGPVVRRGDDEWFAIVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T +AM+ AEE+G+T KN+++ + +   PD+   LG +   + G+ L L   W Y +I+ +
Sbjct: 241 TLFAMLNAEEMGVTSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNTWAYNVIKQV 298

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 GNYAEIFERNVGSESPLKIERGQNNLWNNGGIQYAPPVR 337


>gi|271498820|ref|YP_003331845.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270342375|gb|ACZ75140.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 343

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 166/343 (48%), Positives = 235/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 3   MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+ S+GL F 
Sbjct: 63  DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGSMGLLFT 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R 
Sbjct: 123 GVTYYDGIGFLAHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P++ V+LP++ISK PL P + +GD +W+ 
Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T +N++Q++   T PD+   LG +   N G+ L L  DW Y+I
Sbjct: 243 IVRWTLFAMLDAEEMGVTSQNVDQMAAKPTTPDMAHLLGKE--GNFGKDLKLPNDWAYKI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343


>gi|307129011|ref|YP_003881027.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
 gi|306526540|gb|ADM96470.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
          Length = 341

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 167/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D +K+++ PL AKERF ALQS ++D+LSRNT WT  R+  +GL F 
Sbjct: 61  DVDVCRGVAAAIFGDANKVKFTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P++ V+LP++ISK PL P + +GD +WY 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWYA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT +N++Q++   T PD+   LG +   N G+ L L  DW Y+I
Sbjct: 241 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMSHLLGKE--GNYGKDLKLPADWAYKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP IR
Sbjct: 299 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAIR 341


>gi|83950493|ref|ZP_00959226.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius
           nubinhibens ISM]
 gi|83838392|gb|EAP77688.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius
           nubinhibens ISM]
          Length = 339

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + +  A  L D+K RG L CG+ TGLVGFA    NG W GFD
Sbjct: 1   MKKSVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDENGRWDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDPDAVEFVPTTGKTRFTALASGEIDVLARNTTWTFSRDVDLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y++GQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYNGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P++HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPADHVVLPEIISKEPLGPLVRHGDDEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A++ AEELGIT  NI ++ +    NP+V R LG +   N+GE LGL  DW  + 
Sbjct: 239 VRWTLNALIAAEELGITSANIGELSAAAGDNPEVNRLLGTE--GNLGEMLGLDADWAVKA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++  GNYGE+F++N+G  S + + RG NA W+ GGL+Y+PP R
Sbjct: 297 VQAGGNYGELFEKNIGENSPVGLARGLNAQWTDGGLLYSPPFR 339


>gi|126736638|ref|ZP_01752378.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           CCS2]
 gi|126713951|gb|EBA10822.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           CCS2]
          Length = 339

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 152/343 (44%), Positives = 217/343 (63%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     L +  F +   +A+ L D+K+RG L CG+ TGLVGFA   ANG W GFD
Sbjct: 1   MKKTAFYG--ALTVAGFAASMASAATLDDVKERGVLNCGVTTGLVGFASPDANGVWDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D   ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDSDAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ +  G+SS  +L GA++C+Q GTTTEL LADYF+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFLVPRDLGVSSAKELDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A +   + P++HV+LP+I+SK PL P +  GD +W ++
Sbjct: 179 EGQQQYLAGACDVYTTDASGLAATRAAFENPADHVVLPEIVSKEPLGPLVRHGDNDWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V W+  A++ AEELG+T  NI +++   T NP+V R LG +    +G  LGL  DW    
Sbjct: 239 VRWSLNALIAAEELGVTSANIEELAAAPTGNPEVNRLLGTE--GELGAMLGLEADWAKNA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G  + + + RG NA W+ GGL+Y+PP R
Sbjct: 297 IAAGGNYGELFEKNIGENTPIGLARGLNAQWTDGGLLYSPPFR 339


>gi|313902268|ref|ZP_07835673.1| extracellular solute-binding protein family 3 [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467419|gb|EFR62928.1| extracellular solute-binding protein family 3 [Thermaerobacter
           subterraneus DSM 13965]
          Length = 385

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 138/322 (42%), Positives = 212/322 (65%), Gaps = 3/322 (0%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
               S L  +  RG L CG+N  L GF+ +  +G   GFD DFCRA+++A+FDDP+ +++
Sbjct: 67  QAGQSRLQVVLSRGKLICGVNGQLPGFSYLDPSGQMTGFDADFCRAIAAALFDDPNAVEF 126

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            PL+A+ERF A+QS ++D+L RNT WTL R+   G+ F P T++DG G ++ K + + S+
Sbjct: 127 RPLSAQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFLPTTFYDGGGVMVRKDRNVKSL 186

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L GA+ICV +GTT E+ L D  +A    + P  FE  +++ A Y +  CDA T D S 
Sbjct: 187 ADLDGATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQ 246

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   +     P  HVIL +++SK PL PA+   D+ W+++V W  +A + AEE GI  +N
Sbjct: 247 LAGRRAVLSDPDNHVILDEMLSKEPLGPAVKNNDSTWFDVVKWIVFATIQAEEFGINSQN 306

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           ++Q  K++ NPD++RFLG++    +G+ LG++ D+ YR+I+H+GNYGE+++RNLG  +  
Sbjct: 307 VDQF-KNSDNPDIRRFLGVE--GELGKGLGISNDFAYRVIKHVGNYGEIYERNLGPDTPF 363

Query: 321 KIPRGYNALWSKGGLMYAPPIR 342
           K+ RG N LW+ GGL+Y+PP R
Sbjct: 364 KLERGLNELWTNGGLLYSPPFR 385


>gi|77457200|ref|YP_346705.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77381203|gb|ABA72716.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 343

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 217/343 (63%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    +L  + F+   + L  +KK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT  T  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPG 122

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+  
Sbjct: 123 FITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW  
Sbjct: 183 DESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W  YA++  EE GI+ KN+   +K T NPDV R LG D     G+ L L KDW  +I
Sbjct: 243 IVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVVQI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F++NLG  + L+I RG NALW+ GG+ YAPP+R
Sbjct: 301 VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343


>gi|300865204|ref|ZP_07110022.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
 gi|300336795|emb|CBN55172.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
          Length = 354

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 149/330 (45%), Positives = 213/330 (64%), Gaps = 2/330 (0%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +    ++     S L  I  RG L CG++  L GF+ V   G + G DV+ CRA+++A+F
Sbjct: 27  VATTSSATPQVQSRLDKIISRGTLICGVSGQLPGFSFVDEKGKYSGLDVEICRAIAAALF 86

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           DDP K++Y  LNAKERF ALQS +IDILSRNT WTL R+ S GL F P+ ++D Q  ++ 
Sbjct: 87  DDPEKVEYRNLNAKERFTALQSGEIDILSRNTTWTLSRDGSTGLEFAPVVFYDSQSIMVK 146

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K  GI ++   +G SICVQ GT+TE  L+D  +   +KY P+VFE V    A Y+  RC 
Sbjct: 147 KDSGIQTLKDFAGKSICVQTGTSTEQNLSDQMRKLGIKYTPVVFEDVNATFATYQEGRCQ 206

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             T D S L + +     P +H+IL +++SK PLAPA+  GD++W + V W  YA + AE
Sbjct: 207 GVTADRSQLVSKRTILPTPDQHIILNEVMSKEPLAPAVSSGDSKWADAVRWIVYATIEAE 266

Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312
           +LG+  +NI+Q++  TT+P+V+R +G +   ++G+ LGL  D+  R I+ +GNYGE++DR
Sbjct: 267 DLGVNSQNIDQLATTTTDPNVKRLIGTE--GDLGKGLGLPNDFALRTIKKVGNYGEIYDR 324

Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NLG  S LK+ RG N LW  GGL+Y+PP R
Sbjct: 325 NLGPSSTLKLDRGQNRLWKDGGLLYSPPFR 354


>gi|317122275|ref|YP_004102278.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592255|gb|ADU51551.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 366

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 142/318 (44%), Positives = 214/318 (67%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  + +RG L CG+N  L GF+ +  NG   GFD DFCRA+++A+FDDP+ +++ PL+
Sbjct: 52  SRLQVVLQRGKLICGVNGQLPGFSYLDPNGQMTGFDADFCRAIAAALFDDPNAVEFRPLS 111

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A+ERF A+QS ++D+L RNT WTL R+   G+ F P T++DG G ++ K + + +++ L 
Sbjct: 112 AQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFAPTTFYDGGGIMVRKDRNVKTLADLD 171

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GA+ICV +GTT E+ L D  +A    + P  FE  +++ A Y +  CDA T D S L   
Sbjct: 172 GATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQLAGR 231

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +     P  HVIL +++SK PL PA+   D+ W+++V W  YA + AEE GIT +N++Q 
Sbjct: 232 RAVLSDPDNHVILDEMLSKEPLGPAVKNNDSAWFDVVKWVVYATIQAEEFGITSQNVDQF 291

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K++ NPD++RFLG++    +G+ LG++ D+ YR+I+H+GNYGE++DRNLG  +  K+ R
Sbjct: 292 -KNSDNPDIRRFLGVE--GELGQGLGISNDFAYRVIKHVGNYGEIYDRNLGPNTPFKLER 348

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW+ GGL+YAPP R
Sbjct: 349 GLNELWTNGGLLYAPPFR 366


>gi|330446205|ref|ZP_08309857.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490396|dbj|GAA04354.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 342

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 161/341 (47%), Positives = 233/341 (68%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 + L      F +     + L  + K+G+++CG++ GL GF+   A G W+G DV
Sbjct: 4   KLSVVFAALASSTALFAANVNAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +FC+A+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  +
Sbjct: 64  EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DGQGF++ K  GI S  +L GA++CVQ+GTTTEL LADYF+ + M+Y P+VF+   +
Sbjct: 124 NYYDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMEYKPVVFDTAPQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               + + RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+NIV
Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT + M+ AEE G+T  N+++++K++ +P+++R +G+D     G+ LGL  DW Y+II+
Sbjct: 244 RWTLFTMINAEEFGVTAANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE F+R +G  S LKI RG NALW++GG+ YAPPIR
Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTQGGIQYAPPIR 342


>gi|156935788|ref|YP_001439704.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534042|gb|ABU78868.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894]
          Length = 341

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++     LF  +   +A   L  +KK+GF++CGI+ GL GF+   A G + G 
Sbjct: 1   MKKMMIATLAAAGALFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN++  + + + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R
Sbjct: 299 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 341


>gi|148658095|ref|YP_001278300.1| extracellular solute-binding protein [Roseiflexus sp. RS-1]
 gi|148570205|gb|ABQ92350.1| extracellular solute-binding protein, family 3 [Roseiflexus sp.
           RS-1]
          Length = 389

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 152/319 (47%), Positives = 210/319 (65%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  I+ RG L CG+N+ + GF  V   G + GFD+D+C+AL++AIF+D SK++Y PL
Sbjct: 71  GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKVEYRPL 130

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A++RF ALQS +ID+L RNT WTL R+   G  F   T++DGQG ++ K   I+ +  L
Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +GA+ICVQ GTTTEL LAD   A  ++Y P VFE      AAY   RCDA T D S L +
Sbjct: 191 NGATICVQKGTTTELNLADQMAARKLQYTPAVFEDANSTFAAYAEERCDAVTTDKSGLVS 250

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P +HVIL   +SK PL P + QGD +W++IV WT +A   AEE GIT +N++Q
Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWTVFATFAAEEFGITSRNVDQ 310

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
             +  T P+V+R LG D + ++G  LGL+KDW   +I+ +GNY E++DRNLG  ++  IP
Sbjct: 311 AKESDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKSVGNYAEIYDRNLGPNTKTAIP 370

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG N L+++GGL+YAPP R
Sbjct: 371 RGINNLYTQGGLLYAPPFR 389


>gi|114706424|ref|ZP_01439326.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Fulvimarina pelagi HTCC2506]
 gi|114538285|gb|EAU41407.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Fulvimarina pelagi HTCC2506]
          Length = 339

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 237/342 (69%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F  + L L +    +    A   G +K+RG L+CG+NTGL GFA     G+W+G D
Sbjct: 1   MTIKFLTAALGLSVAALATAGAQAQTAGTVKERGSLRCGVNTGLPGFASQNDQGEWQGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA+++A+  DP  + + PL+A +RF ALQ+ +ID+L+RNT WT+ R+ +LGL F  
Sbjct: 61  VDYCRAVATAVLGDPQAVTFSPLSAVQRFPALQNNEIDLLARNTTWTMDRDTALGLDFAG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++    G++S  +LSGA++CVQ+GTTTEL LADYF+A++M Y+P+V E   
Sbjct: 121 VNYYDGQGFMVKNDLGVNSALELSGATVCVQSGTTTELNLADYFEANDMDYNPVVIESQS 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++++AY + RCD  T D S L A +L    P  H ILP+IISK PL PA+ QGD +W +I
Sbjct: 181 DVNSAYDSGRCDVLTTDASGLAASRLEMSNPDNHTILPEIISKEPLGPAVRQGDDQWADI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WTHYA++ AEELG+ Q N+ ++ K++ NPD++R LG D   N GE LGL +DW  ++I
Sbjct: 241 VRWTHYALLNAEELGVNQGNVEEM-KNSDNPDIRRLLGQDS--NFGEPLGLPQDWAAQVI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+RN+G  + LKI RG NALW+ GGL Y  P+R
Sbjct: 298 SAVGNYGEIFERNIGVNTPLKIQRGQNALWTDGGLQYGMPVR 339


>gi|90409066|ref|ZP_01217191.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3]
 gi|90309823|gb|EAS37983.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3]
          Length = 337

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 224/342 (65%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L   +        +A  L  + K G L CG++TG+ GF+   + G WKG D
Sbjct: 1   MK--VIKIALLFSVASLVPQLASADTLAKVLKNGTLHCGVSTGIPGFSATDSKGVWKGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCR+++SA+  D SK++Y+PL AKERF ALQS +ID+L R++ WT  R+ SLGL F  
Sbjct: 59  VDFCRSVASAVLGDASKVKYIPLTAKERFTALQSGEIDVLVRSSTWTATRDTSLGLNFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   ++S   L GA+ C+QAGTTTEL L DYFK++NM+Y  + ++   
Sbjct: 119 VNYYDGQGFLVKKSLNVNSAKDLDGATFCIQAGTTTELNLTDYFKSNNMQYKAVTYDTSG 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    ++  RCDA T D S LY LKL    P   ++LP+IISK PL P + QGD +W+N+
Sbjct: 179 QTIDGFKKGRCDAVTSDASQLYGLKLKMKDPQSVMVLPEIISKEPLGPVVRQGDDKWFNV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A ++AEELG+T  N++ + K + NP V+R LGI  S   G  LGL++ W Y II
Sbjct: 239 VRWTLFASISAEELGVTTANVDTMLK-SKNPSVKRLLGI--SGKTGADLGLSEKWAYNII 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G++S L I RG N LW+ GGLMY  PIR
Sbjct: 296 KNVGNYGEVFERNVGSKSPLNIKRGLNNLWNNGGLMYPMPIR 337


>gi|87121084|ref|ZP_01076975.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Marinomonas sp. MED121]
 gi|86163576|gb|EAQ64850.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Marinomonas sp. MED121]
          Length = 340

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 224/342 (65%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  +    I    +    S    A  L D+K +GF++CG++ G+ GF+   +NG+W G D
Sbjct: 1   MKSNVGKLISTAAVALTVSAGATAGTLDDVKAKGFIQCGVSQGVPGFSNADSNGNWTGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA ++A+F D  K+++ PL+AKERF ALQS +ID+LSRNT WT  R+ SLGL F  
Sbjct: 61  VDACRAAAAAVFGDAQKVKFTPLSAKERFTALQSGEIDVLSRNTTWTYTRDTSLGLDFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+ S  +L GA++C + GTTTEL +AD+F+ H ++Y P+V ++ +
Sbjct: 121 VNFYDGQGFMVRKDLGVDSALELDGATVCTEQGTTTELNMADFFRKHQLEYVPVVVQKAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY + RCD +T D S L A +      S HVIL + ISK PL P +  GD +W +I
Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADSSAHVILDETISKEPLGPVVRHGDNQWKDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  +  V AEE+GI+  N+ ++  +T +P ++R LG +   ++G  L L  DW Y +I
Sbjct: 241 VTWAMFVQVNAEEMGISSSNVAKIKAETKDPGIRRLLGAE--GDMGAQLSLPADWAYNVI 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+RN+G  + + +PRG N LW++GG+MYAPP+R
Sbjct: 299 AQVGNYGEVFERNVGPSTPVGLPRGINKLWTEGGVMYAPPVR 340


>gi|152998388|ref|YP_001343223.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150839312|gb|ABR73288.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 341

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  +    +    I    S    AS L D+K +GF++CG++TG+ GF+     G+W G D
Sbjct: 1   MKSNVCKLLSTAAIAATISAGAAASTLEDVKAKGFVQCGVSTGVPGFSNADDKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA++SAIF D  K ++ PL+AKER  ALQS +ID+L+RNT WT  R+ SLGL F  
Sbjct: 61  VDACRAVASAIFGDAQKAKFTPLSAKERLTALQSGEIDVLTRNTTWTYTRDASLGLDFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+ S   L GA++C + GTTTEL +AD+F+ + + Y P+V ++ +
Sbjct: 121 VNFYDGQGFMVRKDLGVKSAMDLDGATVCTEQGTTTELNMADFFRKNKLSYVPVVVQKAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY + RCD YT D S L A +     PS HVILP+ ISK PLAP +  GD +W +I
Sbjct: 181 EALAAYDSGRCDVYTTDKSGLAAHRTKLADPSAHVILPETISKEPLAPVVRHGDNQWKDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  +  V AEE+GIT KN+ ++  +T +P ++R LG++   ++G  LGL  DW Y II
Sbjct: 241 VTWALFVQVNAEEMGITSKNVAKIKAETNDPSIKRLLGVE--GDMGSQLGLPADWAYNII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSK-GGLMYAPPIR 342
             +GNYGE+F+RN+G  + L IPRG NALW++ GG+MYAPP+R
Sbjct: 299 AKVGNYGEVFERNIGPSTPLDIPRGLNALWTEAGGIMYAPPVR 341


>gi|115524735|ref|YP_781646.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodopseudomonas palustris BisA53]
 gi|115518682|gb|ABJ06666.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodopseudomonas palustris BisA53]
          Length = 337

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 166/318 (52%), Positives = 228/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  I+ RG L CG++ GL GF+     G+W G DVD CRA+++A+F+DP+K++++PL+
Sbjct: 23  QTLKTIQDRGVLSCGVSQGLPGFSTPDDKGNWTGLDVDICRAIAAAVFNDPTKVKFVPLS 82

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F  +TY+DGQGF++ K   ++S  +L+
Sbjct: 83  AKDRFTALQSGEIDVLSRNTTWTISRDTSLGVNFTGVTYYDGQGFLVKKALKVNSALELN 142

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GASICVQ GTT E  +ADYFK +NMKY  I F   +E   AY A RCD +T D+S LYAL
Sbjct: 143 GASICVQTGTTNEQNVADYFKGNNMKYEVIAFSTADEALKAYEAGRCDVFTSDVSQLYAL 202

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L     ++H +LP++ISK PL P +  GD +W++IV WT +AM+ AEE G+TQKN+   
Sbjct: 203 RLKLAAVADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFAMINAEEFGVTQKNVEDQ 262

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +K    PD++R  G D   N+GE LGLTKDW  RI++  GNYGE+F+RN+G+ S+L I R
Sbjct: 263 AKLDK-PDLKRMFGTD--GNLGEQLGLTKDWVIRIVKATGNYGEVFERNVGSGSKLGIAR 319

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW+KGG+ YAPPIR
Sbjct: 320 GLNQLWNKGGIQYAPPIR 337


>gi|242241099|ref|YP_002989280.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242133156|gb|ACS87458.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 343

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 165/343 (48%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  I+K+GF++CGI+ GL GF+   A G + G 
Sbjct: 3   MKKVIMSTLVAGASLFALANQAHAGATLDAIQKKGFVQCGISDGLPGFSYADAGGKYTGI 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+  +GL F 
Sbjct: 63  DVDVCRGVAAAVFGDANKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGLLFT 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK +NMKY P+ F+R 
Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTNNMKYTPVTFDRS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E V+LP++ISK PL P + +GD +W+ 
Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFVVLPEVISKEPLGPVVRRGDEDWFA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT KN++ ++   T PD+   LG +   N G+ L L  DW Y+I
Sbjct: 243 IVRWTLFAMLNAEEMGITSKNVDALAAKPTTPDMAHLLGKE--GNFGKDLKLPNDWAYKI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343


>gi|254703267|ref|ZP_05165095.1| hypothetical protein Bsuib36_04929 [Brucella suis bv. 3 str. 686]
 gi|261753898|ref|ZP_05997607.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|261743651|gb|EEY31577.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
          Length = 339

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDGWGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|261819589|ref|YP_003257695.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261603602|gb|ACX86088.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 341

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKRIVISTLVAGASLFAAINQAHAGTTLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGIAAAVFGDANKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G++S  +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD EW+ 
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+ +T KN++Q++   T PD+   LG +   + G+ L L  DW ++I
Sbjct: 241 IVRWTLFAMLNAEEMDVTSKNVDQLAAKPTTPDMSHLLGHE--GSYGKDLKLPNDWAFKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341


>gi|291619131|ref|YP_003521873.1| YhdW [Pantoea ananatis LMG 20103]
 gi|291154161|gb|ADD78745.1| YhdW [Pantoea ananatis LMG 20103]
 gi|327395461|dbj|BAK12883.1| putative amino-acid ABC transporter-binding protein YhdW precursor
           [Pantoea ananatis AJ13355]
          Length = 349

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 227/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 9   MKKMMLSTLVAAASLLAVAQQAHAGPTLDAIKKKGFIQCGISDGLPGFSYADASGKFTGL 68

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G  F 
Sbjct: 69  DVDICRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFMFT 128

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ HKK G+ S  +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R 
Sbjct: 129 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + +GD +W+ 
Sbjct: 189 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 248

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +AM+ AEE+GI  KN+++++     PD+   LG +   + G+ L L   W Y I
Sbjct: 249 IVKWSLFAMLNAEEMGINSKNVDEMTAKPATPDMAHLLGAE--GDFGKDLKLDNKWAYNI 306

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 307 IKQVGNYQESFDRNVGKDSPLKIARGQNALWNQGGIQYAPPVR 349


>gi|113475659|ref|YP_721720.1| extracellular solute-binding protein [Trichodesmium erythraeum
           IMS101]
 gi|110166707|gb|ABG51247.1| extracellular solute-binding protein, family 3 [Trichodesmium
           erythraeum IMS101]
          Length = 343

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 219/318 (68%), Gaps = 2/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +K RG L CG+  G+ GF+ V  NG++ G DVD C+A+++A+F+DP+ ++Y  L+
Sbjct: 28  SRLDIVKNRGKLICGVEGGIPGFSFVDKNGNYSGIDVDICKAVAAALFNDPNLVEYRNLD 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           + ERF AL   ++D+LSRNT WT+ R+ ++GL F P T++DGQG ++    G+ S+  L 
Sbjct: 88  STERFTALNGGEVDMLSRNTTWTVSRDTTVGLEFAPTTFYDGQGMMVRANSGVESLEDLQ 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G SICV+AGTTTEL L D  +  N+    + F++ +   AAY   RCD  T D S L + 
Sbjct: 148 GKSICVEAGTTTELNLTDNLRQRNVTAETLTFQQADPAYAAYAEGRCDGMTSDKSQLLSR 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           + T   P++HVIL   +SK PL P     D+ W+++V W  YA++ AEELGITQ+N++ +
Sbjct: 208 RSTLPSPNDHVILQVTMSKEPLGPVTKNNDSAWFDVVKWVTYALIEAEELGITQENVDDL 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            +++ NP ++RFLG+D   ++GE LGL+ D+ YR+I+++GNY E++DRNLG +S+ K+PR
Sbjct: 268 KQNSDNPTIRRFLGVD--GDLGEGLGLSNDFAYRVIKNVGNYAEVYDRNLGEESQFKLPR 325

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW+KGGL+Y+PP R
Sbjct: 326 GMNNLWTKGGLLYSPPFR 343


>gi|163733776|ref|ZP_02141218.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter litoralis Och 149]
 gi|161392887|gb|EDQ17214.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter litoralis Och 149]
          Length = 338

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L I    + +  A  L D+K RG L CG+ TGLVGFA   A+G+W GFD
Sbjct: 1   MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAICRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P+EHV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPTEHVLLPEIISKEPLGPLVRHGDDEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  N+++++  + NP+V+R LG +    +GE LGL  DW  + I
Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGSE--GTLGEMLGLEADWAMKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R
Sbjct: 297 ATQGNYGEIFAKNIGEETPIALSRGLNAQWTNGGLIYSPPFR 338


>gi|330811534|ref|YP_004355996.1| Putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379642|gb|AEA70992.1| Putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 343

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     +    +L  + F+   + L  ++K+GF++CG++ GL GF+   + G   G
Sbjct: 1   MKLLKSTLAVMTAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDSTGKIVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D DFCRA+++A+F D +K+++  LNAKERF ALQS +ID+LSRN+  T  R+  +GL F
Sbjct: 61  IDADFCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDMLSRNSTMTSSRDAGMGLKF 120

Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +    GF+ + K G+ S  +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+
Sbjct: 121 PGFITYYDGIGFLANNKLGVKSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW
Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             IV WT YA++ AEE G+T KN+   +K T NPDV R LG D     G+ L L KDW  
Sbjct: 241 LAIVRWTGYALLNAEEAGVTSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGEMF+RNLG  + L+I RG NALW+ GG+ YAPP+R
Sbjct: 299 QIVKQVGNYGEMFERNLGKGTPLEIDRGLNALWNAGGIQYAPPVR 343


>gi|282897630|ref|ZP_06305630.1| extracellular solute-binding protein, family 3 [Raphidiopsis
           brookii D9]
 gi|281197553|gb|EFA72449.1| extracellular solute-binding protein, family 3 [Raphidiopsis
           brookii D9]
          Length = 351

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 231/354 (65%), Gaps = 15/354 (4%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F   ++  +I                  +   +    +K    L CG++  L GF+
Sbjct: 1   MAKSFLFLVVGPLIFALLGCNSSPSSSTSTSTAQPRNTTDKVKTNLRLVCGVSGELPGFS 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V+ +G + G DVD CRA+++A+FD+P K+++  L+AKERF ALQ+ +ID+LSRNT WT 
Sbjct: 61  FVQTDGKYAGIDVDVCRAVAAALFDNPDKVEFRNLSAKERFTALQTGEIDLLSRNTTWTF 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+ S+GL F P+  +DGQG ++ K  GI+S++ L   +IC Q GTTTE  LAD  +   
Sbjct: 121 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRKRG 180

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           + Y P+VFE +    A Y   RCDA T D SAL + + T  +P +++IL +++S  PLAP
Sbjct: 181 ISYKPVVFEDINVTFATYSEGRCDAVTADRSALISRRTTLPKPEDNIILNELLSSEPLAP 240

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
           A+ QGD +W NIV W+ YA++ AEELGI  +NI+Q   ++ +P+++RFLG +   N+G+ 
Sbjct: 241 AVAQGDPQWNNIVKWSVYALIKAEELGINSQNISQF-ANSKDPEIKRFLGTE--GNLGKG 297

Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GLT D+  RII+H+GNYGE++DRNLG++++L +PRG N L+SKGGL+Y+PP R
Sbjct: 298 IGLTNDFAARIIKHVGNYGEIYDRNLGSKTKLNLPRGQNELYSKGGLLYSPPFR 351


>gi|50119205|ref|YP_048372.1| general L-amino ABC transporter binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|227114001|ref|ZP_03827657.1| general L-amino ABC transporter binding protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|253686635|ref|YP_003015825.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|49609731|emb|CAG73165.1| general L-amino ABC transporter binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|251753213|gb|ACT11289.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 341

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 235/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKRIVISTLVAGASLFAAINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADASGKYSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR L++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G++S  +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN++Q++   T PD+   LG +   + G+ L L  DW ++I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSHLLGHE--GSYGKDLKLPNDWAFKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341


>gi|237730186|ref|ZP_04560667.1| amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226908792|gb|EEH94710.1| amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 341

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMIIASLAAAGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  KN+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|89092424|ref|ZP_01165378.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
 gi|89083512|gb|EAR62730.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
          Length = 354

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 168/342 (49%), Positives = 232/342 (67%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    S++   +    SF   A  L D++KRG + CG++TGL GF++   NG W G D
Sbjct: 18  MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CR++++A+  D SK+QY PL AKERF ALQS +IDILSRNT WT  R+ SLGL F  
Sbjct: 76  VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 135

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+  +
Sbjct: 136 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 195

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  A + + RCD  T D S LYAL++    PS  ++LP++ISK PL P + QGD +W+NI
Sbjct: 196 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 255

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YAMV AE +GI   N +Q +K   NP  QR +G+D   + GE +G++ DW Y I+
Sbjct: 256 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDT--DSGEKMGISNDWAYNIV 312

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RN+G  S LKI RG NA W+KGG+MY+ P+R
Sbjct: 313 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 354


>gi|251791415|ref|YP_003006136.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247540036|gb|ACT08657.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 343

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 165/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 3   MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +GL F 
Sbjct: 63  DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R 
Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P++ V+LP++ISK PL P + +GD +W+ 
Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT +N++Q++   T PD+   LG +   N G+ L L  DW ++I
Sbjct: 243 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMAHLLGKE--GNFGKDLKLPADWAFKI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPTVR 343


>gi|312959110|ref|ZP_07773629.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
 gi|311286880|gb|EFQ65442.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
          Length = 343

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     +    +L  + F+   + L  ++K+GF++CG++ GL GF+   A+G   G
Sbjct: 1   MKVLKSTLAIVCAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D D CRA+++A+F D +K+++  LNAKERF ALQS ++DILSRNT  T  R+  +GL F
Sbjct: 61  IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120

Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +    GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+
Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW
Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             IV W  YAM+ AEE GIT KN+   +K T NPDV R LG D     G+ L + KDW  
Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE+F+RNLG  + L+I RG NALW+KGG+ YAPP+R
Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNKGGIQYAPPVR 343


>gi|119897622|ref|YP_932835.1| putative amino acid-binding protein [Azoarcus sp. BH72]
 gi|119670035|emb|CAL93948.1| putative amino acid-binding protein [Azoarcus sp. BH72]
          Length = 344

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 159/347 (45%), Positives = 230/347 (66%), Gaps = 8/347 (2%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K          L        + +   + L  IK++G L CG+++G+ GF+   + G+W
Sbjct: 1   MKKSLRRIAPAVALGFAATLSATAAHAGATLDQIKRKGELACGVSSGVPGFSATDSRGNW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DVD CRAL++A+  D +K++++PL +++RF ALQ+ ++DILSRNT WTL R+ SLGL
Sbjct: 61  SGLDVDVCRALAAAVLGDANKVKWVPLGSQQRFSALQAGEVDILSRNTTWTLTRDASLGL 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF  ITY+DGQGF++ K   ++S  QL  A ICVQ+GTTTE  LADYF+   ++  P+VF
Sbjct: 121 AFTAITYYDGQGFLVPKSIKVTSAKQLRDAEICVQSGTTTEKNLADYFRRQGIRVKPVVF 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E+ +    A+   RC AYT D S+L  ++     +P +++ILP+ ISK PL P + +GD 
Sbjct: 181 EKFDASLKAFFNGRCVAYTTDASSLAGIRAGEAPKPDDYLILPETISKEPLGPIVRRGDD 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           EW+ IV W  YA++ AEELG+T+ N ++ +    +P V R LG  K+ ++G+ LGL   W
Sbjct: 241 EWFTIVKWVVYALIEAEELGVTRDNADKQAAG-GDPAVGRLLG--KTEDLGKPLGLDAQW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            YR +R +GNYGE+F+RNLG  S L++PRG NALWS+GGLMYAPP+R
Sbjct: 298 AYRAVRAVGNYGEVFERNLGAGSPLRLPRGQNALWSQGGLMYAPPLR 344


>gi|149913099|ref|ZP_01901633.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b]
 gi|149813505|gb|EDM73331.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b]
          Length = 338

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L I   ++ +  A+ L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKKTVILG--ALTIAGLSAGAAAAATLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+ ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDPTAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y    CD YT D S L A +   + PSEHVILP+IISK PL P +  GD+EW +I
Sbjct: 179 EAQPLYLEGACDVYTTDASGLAATRAAFETPSEHVILPEIISKEPLGPLVRHGDSEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  A++ AEE G+T  N+ +++  T NP++ R LG +    +GE LGL  +W  R I
Sbjct: 239 ARWTLNALIAAEEYGVTSANVAELANGTDNPEINRLLGTE--GTLGEMLGLDAEWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA W++GGL+Y+PP R
Sbjct: 297 MAGGNYGELFEKNIGENTPIGLSRGLNAQWTEGGLLYSPPFR 338


>gi|149191354|ref|ZP_01869607.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
 gi|148834833|gb|EDL51817.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
          Length = 342

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 170/345 (49%), Positives = 233/345 (67%), Gaps = 6/345 (1%)

Query: 1   MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   +    +     +  TS S     L  + K G L CG++TGL GF+   + G+W+
Sbjct: 1   MAKKLTLIASLVAASAAMMSTSASAADGTLDKVTKAGVLTCGVSTGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV++C+AL++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL 
Sbjct: 61  GIDVEYCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K  G+SS  +L GAS+CVQ+GTTTEL LADYF+ + M+Y P+VF+
Sbjct: 121 FVGVNYYDGQGFMVKKDLGLSSAKELDGASVCVQSGTTTELNLADYFRNNGMEYKPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + + RCD  T D S LYAL+L    PS  V+LP+IISK PL P + QGD +W
Sbjct: 181 TAAQTSKGFDSGRCDVLTTDQSGLYALRLNLQDPSSAVVLPEIISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  WT  AMV AEE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 241 FNIAKWTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +II+ +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 298 QIIKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|331684909|ref|ZP_08385501.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H299]
 gi|331078524|gb|EGI49730.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H299]
          Length = 341

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+G ++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGVVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|187730695|ref|YP_001881960.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Shigella boydii CDC 3083-94]
 gi|187427687|gb|ACD06961.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shigella boydii CDC 3083-94]
 gi|320177109|gb|EFW52125.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella dysenteriae CDC 74-1112]
          Length = 341

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|157162750|ref|YP_001460068.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli HS]
 gi|170018489|ref|YP_001723443.1| extracellular solute-binding protein [Escherichia coli ATCC 8739]
 gi|170682914|ref|YP_001745538.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Escherichia coli SMS-3-5]
 gi|188493987|ref|ZP_03001257.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 53638]
 gi|194440030|ref|ZP_03072087.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 101-1]
 gi|253771901|ref|YP_003034732.1| extracellular solute-binding protein family 3 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038434|ref|ZP_04872492.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|256024158|ref|ZP_05438023.1| extracellular solute-binding protein family 3 [Escherichia sp.
           4_1_40B]
 gi|297518104|ref|ZP_06936490.1| extracellular solute-binding protein family 3 [Escherichia coli
           OP50]
 gi|300916765|ref|ZP_07133475.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 115-1]
 gi|300928696|ref|ZP_07144214.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 187-1]
 gi|300946948|ref|ZP_07161179.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 116-1]
 gi|300958250|ref|ZP_07170397.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 175-1]
 gi|301028300|ref|ZP_07191560.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 196-1]
 gi|301647044|ref|ZP_07246876.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 146-1]
 gi|307139956|ref|ZP_07499312.1| extracellular solute-binding protein family 3 [Escherichia coli
           H736]
 gi|312972463|ref|ZP_07786637.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1827-70]
 gi|331643968|ref|ZP_08345099.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H736]
 gi|331654867|ref|ZP_08355867.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M718]
 gi|157068430|gb|ABV07685.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli HS]
 gi|169753417|gb|ACA76116.1| extracellular solute-binding protein family 3 [Escherichia coli
           ATCC 8739]
 gi|170520632|gb|ACB18810.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli SMS-3-5]
 gi|188489186|gb|EDU64289.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 53638]
 gi|194421034|gb|EDX37064.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 101-1]
 gi|226840058|gb|EEH72079.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|253322945|gb|ACT27547.1| extracellular solute-binding protein family 3 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|299878643|gb|EFI86854.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 196-1]
 gi|300315068|gb|EFJ64852.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 175-1]
 gi|300415951|gb|EFJ99261.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 115-1]
 gi|300453408|gb|EFK17028.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 116-1]
 gi|300463285|gb|EFK26778.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 187-1]
 gi|301074794|gb|EFK89600.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 146-1]
 gi|310334840|gb|EFQ01045.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1827-70]
 gi|315617078|gb|EFU97688.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 3431]
 gi|323936248|gb|EGB32540.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1520]
 gi|323970317|gb|EGB65587.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TA007]
 gi|331037439|gb|EGI09663.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H736]
 gi|331048249|gb|EGI20326.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M718]
          Length = 341

 Score =  351 bits (901), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|313500474|gb|ADR61840.1| AapJ [Pseudomonas putida BIRD-1]
          Length = 342

 Score =  351 bits (900), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|300937395|ref|ZP_07152230.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 21-1]
 gi|300457569|gb|EFK21062.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 21-1]
          Length = 354

 Score =  351 bits (900), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 14  MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 73

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 74  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 133

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 134 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 193

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 194 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 253

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 254 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 311

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 312 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 354


>gi|323941639|gb|EGB37818.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E482]
          Length = 341

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + + D EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRADDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|325498846|gb|EGC96705.1| putative amino-acid ABC transporter binding protein yhdW precursor
           [Escherichia fergusonii ECD227]
          Length = 341

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|293416693|ref|ZP_06659332.1| general L-amino acid transport system substrate-binding protein
           [Escherichia coli B185]
 gi|291432049|gb|EFF05032.1| general L-amino acid transport system substrate-binding protein
           [Escherichia coli B185]
          Length = 341

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIDTLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|288958131|ref|YP_003448472.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288910439|dbj|BAI71928.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 339

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 168/318 (52%), Positives = 235/318 (73%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  +K+RGF++CG+N GL GF    + G+W G DVD+CRA++ AIF D +K+++ PL+A
Sbjct: 25  TLDTVKQRGFVQCGVNAGLPGFGNPDSAGNWTGLDVDYCRAVAVAIFGDANKVKFTPLSA 84

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF A+QS ++D+LSRNT  TL R+ S+GL F P+TY+DGQGF++ KK G+ S  +L+G
Sbjct: 85  QQRFPAIQSGEVDLLSRNTTVTLTRDTSVGLNFAPVTYYDGQGFMVPKKLGVKSAKELNG 144

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A++CVQ+GTTTEL LADYF+A+NM Y+P+V E  +E++AAY A RCD  T D+S L   +
Sbjct: 145 ATVCVQSGTTTELNLADYFRANNMTYNPVVIESNDEVNAAYFAGRCDVLTTDVSGLAGTR 204

Query: 206 L-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                 P +HVILP++ISK PLAPA+  GD +W++IV WT YA + AEE GIT KNI++ 
Sbjct: 205 AGVAPVPDDHVILPEVISKEPLAPAVRHGDDQWFDIVKWTVYATIQAEEFGITSKNIDEF 264

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
             ++ NPD+QRFLG      +G+A+GL + W Y I++ +GNY E+FDRN+G  + LK+ R
Sbjct: 265 -ANSKNPDIQRFLGTSP--GMGKAMGLDEKWAYNIVKKVGNYAEIFDRNVGPATPLKLER 321

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+KGGLMYA P R
Sbjct: 322 GLNALWTKGGLMYAQPFR 339


>gi|89093226|ref|ZP_01166176.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
 gi|89082522|gb|EAR61744.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
          Length = 337

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 168/342 (49%), Positives = 232/342 (67%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    S++   +    SF   A  L D++KRG + CG++TGL GF++   NG W G D
Sbjct: 1   MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CR++++A+  D SK+QY PL AKERF ALQS +IDILSRNT WT  R+ SLGL F  
Sbjct: 59  VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+  +
Sbjct: 119 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  A + + RCD  T D S LYAL++    PS  ++LP++ISK PL P + QGD +W+NI
Sbjct: 179 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YAMV AE +GI   N +Q +K   NP  QR +G+D   + GE +G++ DW Y I+
Sbjct: 239 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDT--DSGEKMGISNDWAYNIV 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RN+G  S LKI RG NA W+KGG+MY+ P+R
Sbjct: 296 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 337


>gi|159184823|ref|NP_354575.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140108|gb|AAK87360.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 312

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 166/312 (53%), Positives = 234/312 (75%), Gaps = 1/312 (0%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K +GF+ CG++ G+ GF+     G+W G DVD+CR +++A+F DPSK +++ L++K+RF 
Sbjct: 2   KGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFP 61

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ALQS ++D+L+RNT WT+ R+ SLG  FR + Y+DGQGFI  K   + S  +LSGA++CV
Sbjct: 62  ALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCV 121

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GTTTEL LADYFK +N++Y+P+VFE+  +  +AY + RCD YT D S LYA++L    
Sbjct: 122 QTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLKN 181

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           P ++++LP++ISK PL PA+ QGD +W++IV+W HYAMV AEELGIT KN+++  K + N
Sbjct: 182 PDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDE-QKTSAN 240

Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330
           PDV+R LG ++ + IG  LG+  DW Y I++ +GNYGE+FDRN+G  S LKI RG NALW
Sbjct: 241 PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALW 300

Query: 331 SKGGLMYAPPIR 342
           +KGGL YAPP+R
Sbjct: 301 TKGGLQYAPPVR 312


>gi|194435095|ref|ZP_03067332.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shigella dysenteriae 1012]
 gi|194416657|gb|EDX32789.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shigella dysenteriae 1012]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGIDSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|300817474|ref|ZP_07097690.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 107-1]
 gi|300824982|ref|ZP_07105081.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 119-7]
 gi|331670093|ref|ZP_08370938.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA271]
 gi|331679342|ref|ZP_08380014.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H591]
 gi|300522548|gb|EFK43617.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 119-7]
 gi|300529772|gb|EFK50834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 107-1]
 gi|331063006|gb|EGI34920.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA271]
 gi|331073407|gb|EGI44730.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H591]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 158/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL PA+ +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPAVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|38704156|ref|NP_312168.2| periplasmic binding transport protein [Escherichia coli O157:H7
           str. Sakai]
 gi|157159268|ref|YP_001464743.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E24377A]
 gi|168752394|ref|ZP_02777416.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758500|ref|ZP_02783507.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764869|ref|ZP_02789876.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|168769134|ref|ZP_02794141.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|168777686|ref|ZP_02802693.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|168783839|ref|ZP_02808846.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|168786163|ref|ZP_02811170.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC869]
 gi|168802616|ref|ZP_02827623.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC508]
 gi|191169153|ref|ZP_03030911.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B7A]
 gi|193066465|ref|ZP_03047510.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E22]
 gi|194430248|ref|ZP_03062745.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B171]
 gi|195940012|ref|ZP_03085394.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807576|ref|ZP_03249913.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208813206|ref|ZP_03254535.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208820750|ref|ZP_03261070.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397538|ref|YP_002272730.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326793|ref|ZP_03442876.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|254795210|ref|YP_003080047.1| periplasmic-binding component of an ABC superfamily putative amino
           acid transporter [Escherichia coli O157:H7 str. TW14359]
 gi|256018818|ref|ZP_05432683.1| periplasmic-binding component of an ABC superfamily predicted amino
           acid transporter [Shigella sp. D9]
 gi|260846073|ref|YP_003223851.1| putative periplasmic binding transport protein [Escherichia coli
           O103:H2 str. 12009]
 gi|260857395|ref|YP_003231286.1| putative periplasmic binding transport protein [Escherichia coli
           O26:H11 str. 11368]
 gi|260870019|ref|YP_003236421.1| putative periplasmic binding transport protein [Escherichia coli
           O111:H- str. 11128]
 gi|261228273|ref|ZP_05942554.1| periplasmic-binding component of an ABC superfamily predicted amino
           acid transporter [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255131|ref|ZP_05947664.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284635|ref|YP_003501453.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. CB9615]
 gi|293406870|ref|ZP_06650796.1| amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|293412637|ref|ZP_06655360.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293449591|ref|ZP_06664012.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           B088]
 gi|298382611|ref|ZP_06992208.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           FVEC1302]
 gi|300898040|ref|ZP_07116411.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 198-1]
 gi|300904464|ref|ZP_07122310.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 84-1]
 gi|300925986|ref|ZP_07141809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 182-1]
 gi|301304263|ref|ZP_07210377.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 124-1]
 gi|301326288|ref|ZP_07219661.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 78-1]
 gi|307314974|ref|ZP_07594562.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|309793849|ref|ZP_07688275.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 145-7]
 gi|13959662|sp|P58068|YHDW_ECO57 RecName: Full=Putative amino-acid ABC transporter-binding protein
           yhdW; Flags: Precursor
 gi|157081298|gb|ABV21006.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E24377A]
 gi|187767128|gb|EDU30972.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013752|gb|EDU51874.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|188998861|gb|EDU67847.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354670|gb|EDU73089.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|189361744|gb|EDU80163.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365193|gb|EDU83609.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373879|gb|EDU92295.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC869]
 gi|189375432|gb|EDU93848.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC508]
 gi|190900795|gb|EDV60586.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B7A]
 gi|192925894|gb|EDV80543.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E22]
 gi|194411719|gb|EDX28044.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B171]
 gi|208727377|gb|EDZ76978.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208734483|gb|EDZ83170.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740873|gb|EDZ88555.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209158938|gb|ACI36371.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|217319160|gb|EEC27585.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|254594610|gb|ACT73971.1| periplasmic-binding component of an ABC superfamily predicted amino
           acid transporter [Escherichia coli O157:H7 str. TW14359]
 gi|257756044|dbj|BAI27546.1| putative periplasmic binding transport protein [Escherichia coli
           O26:H11 str. 11368]
 gi|257761220|dbj|BAI32717.1| putative periplasmic binding transport protein [Escherichia coli
           O103:H2 str. 12009]
 gi|257766375|dbj|BAI37870.1| putative periplasmic binding transport protein [Escherichia coli
           O111:H- str. 11128]
 gi|290764508|gb|ADD58469.1| Putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. CB9615]
 gi|291322681|gb|EFE62110.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           B088]
 gi|291426876|gb|EFE99908.1| amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|291469408|gb|EFF11899.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298277751|gb|EFI19267.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           FVEC1302]
 gi|300358259|gb|EFJ74129.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 198-1]
 gi|300403626|gb|EFJ87164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 84-1]
 gi|300417930|gb|EFK01241.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 182-1]
 gi|300840389|gb|EFK68149.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 124-1]
 gi|300846989|gb|EFK74749.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 78-1]
 gi|306905557|gb|EFN36089.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|308122806|gb|EFO60068.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 145-7]
 gi|315257196|gb|EFU37164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 85-1]
 gi|320181542|gb|EFW56460.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella boydii ATCC 9905]
 gi|320189617|gb|EFW64276.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. EC1212]
 gi|320639914|gb|EFX09505.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H7 str. G5101]
 gi|320645630|gb|EFX14639.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H- str. 493-89]
 gi|320650940|gb|EFX19397.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H- str. H 2687]
 gi|320656321|gb|EFX24233.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320662011|gb|EFX29419.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666847|gb|EFX33826.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323154488|gb|EFZ40689.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli EPECa14]
 gi|323162953|gb|EFZ48788.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli E128010]
 gi|323173472|gb|EFZ59101.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli LT-68]
 gi|323178551|gb|EFZ64127.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1180]
 gi|323183028|gb|EFZ68427.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1357]
 gi|323376846|gb|ADX49114.1| extracellular solute-binding protein family 3 [Escherichia coli
           KO11]
 gi|323946885|gb|EGB42901.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H120]
 gi|324009098|gb|EGB78317.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 57-2]
 gi|324020751|gb|EGB89970.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 117-3]
 gi|324119448|gb|EGC13331.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1167]
 gi|326337965|gb|EGD61799.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. 1125]
 gi|326347534|gb|EGD71259.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. 1044]
 gi|332086450|gb|EGI91597.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           dysenteriae 155-74]
 gi|332087261|gb|EGI92394.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           boydii 5216-82]
 gi|332102250|gb|EGJ05596.1| amino acid ABC transporter [Shigella sp. D9]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|86605966|ref|YP_474729.1| polar amino acid ABC transporter amino acid-binding protein
           [Synechococcus sp. JA-3-3Ab]
 gi|86608412|ref|YP_477174.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86554508|gb|ABC99466.1| polar amino amino acid ABC transporter (PAAT) family, amino
           acid-binding protein [Synechococcus sp. JA-3-3Ab]
 gi|86556954|gb|ABD01911.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic
           amino acid-binding protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 345

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 145/332 (43%), Positives = 214/332 (64%), Gaps = 6/332 (1%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            + +    +++    +   IK RG L CG+N  L GF  +   G + GFD+D CRA+++A
Sbjct: 20  SMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAA 79

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +F DP K++Y+ L A  R  A+QS ++D++SRNT WTL R+    + F P TY+DGQGF+
Sbjct: 80  LFGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFM 139

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + K  G+  +  L+GA+ICV AGTTTEL LAD F+A  + + P+ F+  +    AY   R
Sbjct: 140 VRKSLGVEKLEDLNGATICVIAGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGR 199

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           CDA T D SAL + + +   P +HVILP++ISK PL P +  GD  + +I++WT YA+  
Sbjct: 200 CDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVPHGDESFSDIMNWTVYALFY 259

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           AEE GIT  N+++  K + +PD++RFLG +   N+GE LGL  DW   +I+ +GNYGE+F
Sbjct: 260 AEEKGITSANVDEFLK-SEDPDIRRFLGQE--GNLGELLGLKPDWVVNVIKAVGNYGEIF 316

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +R+L   + L +PRG N  ++KGG+ YAPP R
Sbjct: 317 NRHL---TPLGVPRGLNQPYTKGGIQYAPPFR 345


>gi|320202178|gb|EFW76753.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli EC4100B]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMTHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|301022227|ref|ZP_07186142.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 69-1]
 gi|331674783|ref|ZP_08375542.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA280]
 gi|284923282|emb|CBG36376.1| Putative ABC transporter, substrate-binding protein [Escherichia
           coli 042]
 gi|300397640|gb|EFJ81178.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 69-1]
 gi|323966446|gb|EGB61880.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli M863]
 gi|323979012|gb|EGB74090.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TW10509]
 gi|324115128|gb|EGC09092.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
 gi|327251362|gb|EGE63051.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli STEC_7v]
 gi|331068222|gb|EGI39618.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA280]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|229588541|ref|YP_002870660.1| putative amino acid ABC transporter substrate-binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229360407|emb|CAY47264.1| putative amino acid ABC transport system, substrate-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 343

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     +    +L  + F+   + L  ++K+GF++CG++ GL GF+   A+G   G
Sbjct: 1   MKVLKSTLAIVSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D D CRA+++A+F D +K+++  LNAKERF ALQS ++DILSRNT  T  R+  +GL F
Sbjct: 61  IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120

Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +    GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+ +N+KY PI F+
Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW
Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             IV W  YAM+ AEE GIT KN+   +K T NPDV R LG D     G+ L + KDW  
Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE+F+RNLG  + L+I RG NALW+ GG+ YAPP+R
Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343


>gi|26988032|ref|NP_743457.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida KT2440]
 gi|24982752|gb|AAN66921.1|AE016320_9 general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida KT2440]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 162/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+E+V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|326797351|ref|YP_004315171.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326548115|gb|ADZ93335.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 340

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  +    +    I    S +  A+ L D+K +GF++CG++ G+ GF+     G+W G D
Sbjct: 1   MKSNMSKILTTAAIAATVSATAGAATLDDVKSKGFIQCGVSQGVPGFSNADEAGNWSGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA ++A+F D   +++ PL+AKERF ALQS +ID+LSRNT WT  R+ +LGL F  
Sbjct: 61  VDACRAAAAAVFGDAQAVKFTPLSAKERFTALQSGEIDMLSRNTTWTYTRDTALGLDFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++    G++S  +L GA++C + GTTTEL +AD+F+ H + Y P++ ++ +
Sbjct: 121 VNFYDGQGFMVRNDLGVTSAMELDGATVCTEQGTTTELNMADFFRKHGLSYVPVIVQKAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY + RCD +T D S L A +     PS HVILP+ ISK PL P +  GD +W +I
Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADPSAHVILPETISKEPLGPVVRHGDNQWKDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  +  V AEE+GI+ KN+ ++  ++ +P ++R LG +   N+GE+LGL  DW Y II
Sbjct: 241 VTWAMFVQVNAEEMGISSKNVAKIKAESKDPAIRRLLGAE--GNMGESLGLGADWAYDII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+ N+G  + + +PRG N LW++GG+MYAPP+R
Sbjct: 299 AEVGNYGEVFENNVGPNTPVGLPRGINNLWTEGGVMYAPPVR 340


>gi|237799855|ref|ZP_04588316.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022710|gb|EGI02767.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 322

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 223/324 (68%), Gaps = 2/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +   + L  I+K+GF++CG++ GL GF+   +NG   G D D CRA+++A+F D +K+
Sbjct: 1   GAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSNGKITGIDADVCRAVAAAVFGDATKV 60

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           ++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  +TY+DG GF+++ K G+ 
Sbjct: 61  KFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTGVTYYDGIGFLVNNKLGVK 120

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +E   +    RCD  T D 
Sbjct: 121 SAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDESAKSLEGGRCDVLTSDQ 180

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S LYA +    +P ++V+LP++ISK PL P + +GD EW++IV WT +AM+ AEE  IT 
Sbjct: 181 SQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKGDEEWFSIVRWTLFAMLNAEEAKITS 240

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           KN+   +K T NPDV R LG D     G+ L L KDW  +I++ +GNYGE+F+RNLG  +
Sbjct: 241 KNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIVKQVGNYGEVFERNLGENT 298

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG NALW+ GG+ YAPPIR
Sbjct: 299 PLKIKRGQNALWNAGGIQYAPPIR 322


>gi|262404012|ref|ZP_06080567.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
 gi|262349044|gb|EEY98182.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 170/338 (50%), Positives = 232/338 (68%), Gaps = 3/338 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               I     L   S S   S L  +  +GF+ CG++TGL GF+   A GDW+G DV++C
Sbjct: 8   LASVIAASSALMTYSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYC 67

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +AL++A+  D +K++++PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+
Sbjct: 68  QALAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYY 127

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQGF++ K  GI S  +L GAS+CVQ+GTTTEL LADYF+ + MKY P+VF+   +   
Sbjct: 128 DGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNNGMKYKPVVFDTSAQTSK 187

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            + A RCD  T D S LYAL+L  ++P   V+LP+IISK PL P + Q D +W+N+  W 
Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLEKPDAAVVLPEIISKEPLGPVVRQDDDKWFNVAKWV 247

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            YAMV AEE GIT KN++++ K + NP+V+R LG+D     G  LG+  DW+Y+I++ +G
Sbjct: 248 LYAMVNAEEYGITSKNVDEMMK-SENPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVG 304

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NYGE F+R +G+ S LKI RG NALW+ GG MYAPPIR
Sbjct: 305 NYGESFERTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342


>gi|119489532|ref|ZP_01622293.1| polar amino acid transport system substrate-binding proetin
           [Lyngbya sp. PCC 8106]
 gi|119454611|gb|EAW35758.1| polar amino acid transport system substrate-binding proetin
           [Lyngbya sp. PCC 8106]
          Length = 357

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 136/326 (41%), Positives = 214/326 (65%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
                T+ S L  +K RG L CG++ G+ GF+ V  NG++ G DVD C+A+++AIF+DP+
Sbjct: 35  GGGSGTSQSRLDTVKSRGKLVCGVDGGIPGFSFVNENGEYSGLDVDMCKAVAAAIFNDPN 94

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++Y  L++ ERF AL+S ++D+LSRNT WT+ R+ S+G+ F P T++DGQG ++ +  G
Sbjct: 95  AVEYRNLDSTERFEALKSGEVDMLSRNTTWTITRDTSVGMEFAPTTFYDGQGMMVRRDSG 154

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+S+    G ++CV+AGTTTEL L D  +   +      +++ +   AAY    CD  T 
Sbjct: 155 ITSLEDFEGRTVCVEAGTTTELNLTDNMRKAGVNSETKTYQQADPAYAAYAEGACDGMTS 214

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A + T   P +H++L   +SK PL P  I  D+ W+++V WT +A++  EELGI
Sbjct: 215 DKSQLVARRSTLPNPDDHILLDVTMSKEPLGPVTINNDSAWFDVVKWTTFALIEGEELGI 274

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
            Q N++Q+ K +  P ++RFLGI+   ++G+ LGL  ++   +I+ +GNYGE+++RNLG 
Sbjct: 275 NQANVDQL-KSSEEPTIRRFLGIE--GDLGQGLGLDNEFAANVIKQVGNYGEIYERNLGQ 331

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            S+ ++ RG NALW+ GGL+Y+PP R
Sbjct: 332 GSQFRLDRGQNALWNNGGLLYSPPFR 357


>gi|331664877|ref|ZP_08365782.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA143]
 gi|331058125|gb|EGI30107.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA143]
          Length = 341

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++   +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKEANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|104783492|ref|YP_609990.1| general amino acid ABC transporter periplasmic binding protein
           [Pseudomonas entomophila L48]
 gi|95112479|emb|CAK17206.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas entomophila L48]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L  TSF+   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGATSFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+ +KK G+SS  +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLANKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+E+V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|13959721|sp|P45766|YHDW_ECOLI RecName: Full=Putative amino-acid ABC transporter-binding protein
           yhdW; Flags: Precursor
          Length = 341

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +    A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|170720090|ref|YP_001747778.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169758093|gb|ACA71409.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAGPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE G+T KN+   +K T NPD  R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDTARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|84499808|ref|ZP_00998096.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           batsensis HTCC2597]
 gi|84392952|gb|EAQ05163.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           batsensis HTCC2597]
          Length = 339

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 224/343 (65%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + +  A+ L D+K RG L CG++TGL GF+   ANG+W+GFD
Sbjct: 1   MKKSVFLG--ALTVAGLAAGAAAAATLDDVKARGTLNCGVSTGLAGFSAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+ ++++P   K RF AL S +ID+L+RNT WTL R+  L   F  
Sbjct: 59  VAVCRAVATAVLGDPNAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI  K  G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFITPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P++HVILP+IISK PL P +  GD+EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFETPTDHVILPEIISKEPLGPLVRHGDSEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V W+  AM+ AEELG+T  N+ ++S  TT+ P++ R LG +   N+GE LGL  DW   I
Sbjct: 239 VRWSLNAMIAAEELGVTSANVEEMSSSTTDNPEINRLLGTE--GNLGEMLGLEADWAKNI 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I  +GNYGE+F+ N+G  + + + RG NA W+ GGL+YAPP R
Sbjct: 297 IMQVGNYGEVFEANIGESTPIGLARGLNAQWTDGGLLYAPPFR 339


>gi|260778552|ref|ZP_05887444.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604716|gb|EEX31011.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 342

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 171/342 (50%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     L  TS S   S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTALMSTSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL+SA+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALASAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAEVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GI+ KN +++ K + +P+V+R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMVNAEEYGISSKNADEMLK-SKDPNVKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|77462291|ref|YP_351795.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Rhodobacter
           sphaeroides 2.4.1]
 gi|221638145|ref|YP_002524407.1| Cationic amino acid ABC transporter periplasmic binding protein
           [Rhodobacter sphaeroides KD131]
 gi|77386709|gb|ABA77894.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Rhodobacter
           sphaeroides 2.4.1]
 gi|221158926|gb|ACL99905.1| Cationic amino acid ABC transporter, periplasmic binding protein
           precursor [Rhodobacter sphaeroides KD131]
          Length = 338

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    +   +A+ L D+K RG L CG++TGL GF+   ANG+W GFD
Sbjct: 1   MTKSVFLG--TLTVAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D +K++++P   + RF AL S ++D+L+RN+ WT  R+  L L F  
Sbjct: 59  VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+FK +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E +  Y A  CDAYT D S L A +     P  H+ILP+IISK PL PA+  GD EW +I
Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEE G+T  N+ +++ ++ NP++QR LG+    ++G+ + L  DW  R I
Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRLLGV--QGDLGKMIRLDNDWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F   +G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338


>gi|148549630|ref|YP_001269732.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148513688|gb|ABQ80548.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 342

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFRDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|319793876|ref|YP_004155516.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315596339|gb|ADU37405.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 344

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 154/346 (44%), Positives = 227/346 (65%), Gaps = 6/346 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   F  +++    L   + +        L  +K+RG +KCG+  G+ GF+     G+W 
Sbjct: 1   MKNRFRPALIAAASLVAFATAAPAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD CRA+++A+  D  K+ ++PLN+++RF ALQ+ +IDIL+RNT WTL R+ SLG  
Sbjct: 61  GLDVDTCRAIAAAVLGDAKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ITY+DGQGF++ KK  ++S  QL  A+IC Q+GTT E  ++DYF+A N+    +VFE
Sbjct: 121 FTTITYYDGQGFLVPKKLKVTSAKQLKNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFE 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             E    A+ + RC A+T D SAL  L+      P +++ILP++ISK PLAP + +GD E
Sbjct: 181 SFEASFKAFFSGRCQAFTTDASALAGLRNKEAPNPDDYIILPELISKEPLAPLVRRGDDE 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W+ I  W   A++ AEE G+TQ N +++   + +P  QR +G     ++G+ LGL KDW+
Sbjct: 241 WFAIAKWVPNALIEAEEAGVTQANADELKASSKDPAQQRLVGT--GEDLGKLLGLDKDWS 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +R I+ +GNYGE+F+RN+G +S LK+PRG N LWSKGGL+YAPP+R
Sbjct: 299 FRAIKAVGNYGEVFERNVGPKSVLKLPRGSNNLWSKGGLIYAPPVR 344


>gi|258544539|ref|ZP_05704773.1| general amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258520221|gb|EEV89080.1| general amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 350

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 233/342 (68%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L L  L  T+    A  L D+KKRG L+CG+   L GF+    +G W G D
Sbjct: 15  MKKSLLFTALGLATLVQTT---QADTLDDVKKRGELRCGVTQALAGFSVADDSGRWTGLD 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRAL+SAIFDDP K+ + P ++KERF  LQS +ID+L+R T WT  R++ +   F  
Sbjct: 72  VDYCRALASAIFDDPEKVSFRPTSSKERFTVLQSGEIDVLARVTTWTTSRDVDMPFDFIG 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GI SV +LSGASIC   GT+TE  +ADYFK++ M+Y P++FE+ E
Sbjct: 132 VNYYDGQGFMVRKDLGIKSVKELSGASICTNTGTSTETNMADYFKSNGMEYKPVIFEKSE 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+ +AY A RCDAY+ D+S LY  +    +P +H+ILP++ISK PL P + Q D  + ++
Sbjct: 192 EVKSAYDAGRCDAYSSDVSGLYVQRKLLAKPDDHIILPEVISKEPLGPLVRQEDPGFKDL 251

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
            +WTH+ MV AEE G+++ N+ ++ K + NP+++R LG++ +    + LG+  D+  +II
Sbjct: 252 AAWTHFCMVNAEEYGVSKANLEEMKK-SDNPNIRRLLGLEANG--ADKLGVGADFCAKII 308

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNYGE +DRN+G  S L I RG N LW++GG+M+APP+R
Sbjct: 309 KHVGNYGEAYDRNVGKDSPLNIERGLNRLWNQGGIMFAPPLR 350


>gi|51245286|ref|YP_065170.1| amino acid ABC transporter, periplasmic substrate-binding protein
           [Desulfotalea psychrophila LSv54]
 gi|50876323|emb|CAG36163.1| probable amino acid ABC transporter, periplasmic substrate-binding
           protein [Desulfotalea psychrophila LSv54]
          Length = 339

 Score =  349 bits (895), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 162/342 (47%), Positives = 234/342 (68%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +   +     + + +A+ L  +K++G++  G++  ++GF+   + G W+G D
Sbjct: 1   MKSVCNRLVGAALGSLLLASTVSATTLDVVKEKGYVNAGVSGKVIGFSAPDSQGVWRGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF RA++SAIFDDP+K ++ P+  KE F ALQS +I+IL+RNT WT  R+  LGL F  
Sbjct: 61  VDFVRAVASAIFDDPNKARFTPVAFKEAFAALQSGEIEILARNTTWTFQRDTKLGLEFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++DGQGF++HK  G+ S  +L GAS+C Q+GTTTEL +ADYF +H M Y P+V+E  +
Sbjct: 121 PLFYDGQGFLVHKDLGVKSALELDGASVCTQSGTTTELNMADYFASHGMTYLPVVYESAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y   RCD YT D SAL A +     P +H ILP+IISK PL PA+ QGD +W ++
Sbjct: 181 EATVIYDTGRCDVYTTDSSALAARRTILSNPDDHEILPEIISKEPLGPAVRQGDQQWSDL 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++T EELGIT +N++Q+   + N +V+RFLG+D   + G+ +GL+ DW YRII
Sbjct: 241 VRWTLFALITGEELGITSENVDQML-TSENTEVKRFLGVDS--DFGQHIGLSHDWAYRII 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNY E+F+RN+G+Q+ L + RG NALW+ GGLMYAPPIR
Sbjct: 298 KHVGNYSEVFERNVGSQTALGLDRGLNALWTNGGLMYAPPIR 339


>gi|54309363|ref|YP_130383.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum SS9]
 gi|46913799|emb|CAG20581.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum SS9]
          Length = 342

 Score =  349 bits (895), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 162/345 (46%), Positives = 237/345 (68%), Gaps = 6/345 (1%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K       +I     LF  + S   + L  + K+G+++CG++ GL GF+   + G+W+
Sbjct: 1   MTKKPSVLLAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A   D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL 
Sbjct: 61  GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ++Y+DGQGF++ K+ G+SS  +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+
Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + + RCD  T D S LYAL+L    P+  V+LP++ISK PL P + QGD +W
Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLADPASAVVLPEVISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NIV WT  AM+ AEE G+T  N++++ K++ +P+++R +G+D     G+ LGL  DW Y
Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLD--GPKGKGLGLNDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE F+R +G  S LKI RG NALW  GG+ YA PIR
Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342


>gi|26249860|ref|NP_755900.1| putative amino-acid ABC transporter binding protein yhdW
           [Escherichia coli CFT073]
 gi|110643514|ref|YP_671244.1| putative amino-acid ABC transporter binding protein YhdW precursor
           [Escherichia coli 536]
 gi|191173851|ref|ZP_03035372.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli F11]
 gi|227887996|ref|ZP_04005801.1| amino-acid ABC superfamily ATP binding cassette transporter binding
           protein yhdW precursor [Escherichia coli 83972]
 gi|300979705|ref|ZP_07174655.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 200-1]
 gi|300991067|ref|ZP_07179488.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 45-1]
 gi|301047875|ref|ZP_07194922.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 185-1]
 gi|26110288|gb|AAN82474.1|AE016767_234 Putative amino-acid ABC transporter binding protein yhdW precursor
           [Escherichia coli CFT073]
 gi|110345106|gb|ABG71343.1| putative amino-acid ABC transporter binding protein YhdW precursor
           [Escherichia coli 536]
 gi|190905901|gb|EDV65519.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli F11]
 gi|227835392|gb|EEJ45858.1| amino-acid ABC superfamily ATP binding cassette transporter binding
           protein yhdW precursor [Escherichia coli 83972]
 gi|300300218|gb|EFJ56603.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 185-1]
 gi|300307923|gb|EFJ62443.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 200-1]
 gi|300406988|gb|EFJ90526.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 45-1]
 gi|307555363|gb|ADN48138.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli ABU 83972]
 gi|315294821|gb|EFU54164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 153-1]
 gi|324015878|gb|EGB85097.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 60-1]
          Length = 341

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W + I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAFNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|149203333|ref|ZP_01880303.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           TM1035]
 gi|149143166|gb|EDM31205.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           TM1035]
          Length = 339

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + ++ A+ L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAICRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDTDLKFDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L + +   + P +HVILP+IISK PL P +  GD +W +I
Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFENPGDHVILPEIISKEPLGPLVRHGDNDWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT YA+V AEE+GIT  NI ++ +    NP++ R LG +    +G  +GL  DW  R 
Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGANPEINRILGTE--GELGAMIGLDNDWAKRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R
Sbjct: 297 ISVGGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339


>gi|90410648|ref|ZP_01218664.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum 3TCK]
 gi|90328889|gb|EAS45173.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum 3TCK]
          Length = 342

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 163/345 (47%), Positives = 239/345 (69%), Gaps = 6/345 (1%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K     F +I     LF  + S   + L  + K+G+++CG++ GL GF+   + G+W+
Sbjct: 1   MAKKSSVLFAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A   D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL 
Sbjct: 61  GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ++Y+DGQGF++ K+ G+SS  +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+
Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + + RCD  T D S LYAL+L    P+  V+LP++ISK PL P + QGD +W
Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLAEPASAVVLPEVISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NIV WT  AM+ AEE G+T  N++++ K++ +P+++R +G+D     G+ LGL+ DW Y
Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLD--GPKGKGLGLSDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE F+R +G  S LKI RG NALW  GG+ YA PIR
Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342


>gi|167035543|ref|YP_001670774.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166862031|gb|ABZ00439.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 342

 Score =  348 bits (894), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+N+KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG       G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLG--GDGEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|260768536|ref|ZP_05877470.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           furnissii CIP 102972]
 gi|260616566|gb|EEX41751.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           furnissii CIP 102972]
 gi|315180248|gb|ADT87162.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio furnissii NCTC 11218]
          Length = 342

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 169/342 (49%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++         S S   S L  +  +GFL CG++TGL GF+   A G+W+G D
Sbjct: 4   KLTLLASVVAASTALMANSASAADSTLDKVLSQGFLTCGVSTGLPGFSNPNAKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L  ++P   V+LP+IISK PL P + Q D +W+N+
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNV 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT +AMV AEE GIT KN +++ K + NP+V+R LG+D     G+ LG+  DW Y+I+
Sbjct: 244 AKWTLFAMVNAEEYGITSKNADEMLK-SDNPEVKRILGVD--GPKGKGLGIRDDWGYQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|325275056|ref|ZP_08141044.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas sp. TJI-51]
 gi|324099819|gb|EGB97677.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas sp. TJI-51]
          Length = 342

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 158/324 (48%), Positives = 227/324 (70%), Gaps = 2/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S +   + L  +KK+GF++CG++ GL GF+   A G   G D D CRA+++A+F D +K+
Sbjct: 21  SNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIIGIDADVCRAVAAAVFGDANKV 80

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           ++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  +TY+DG GF+++KK G+S
Sbjct: 81  KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFTGVTYYDGVGFLVNKKLGVS 140

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +E   +  + RCD  T D 
Sbjct: 141 SAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L+A +     P+E+V+LP+ ISK PL P + +GD +W++IV WT +AM+ AEE GIT 
Sbjct: 201 SQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEDWFSIVKWTLFAMLNAEEAGITS 260

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           KN+   +K T NPDV R LG D     G+ L L KDW  +I++ +GNYGE+F++NLG  +
Sbjct: 261 KNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQGT 318

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
           +LKI RG NALW+ GG+ YAPP+R
Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342


>gi|254508781|ref|ZP_05120893.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
 gi|219548301|gb|EED25314.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
          Length = 342

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     F  + ++ A S L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTAFMATSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K + +P+V+R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLNAMINAEEYGISSKNADEMLK-SKDPNVKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|193071524|ref|ZP_03052434.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E110019]
 gi|192955161|gb|EDV85654.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E110019]
          Length = 341

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +     G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GYYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|91212699|ref|YP_542685.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli UTI89]
 gi|117625557|ref|YP_858880.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli APEC O1]
 gi|215488575|ref|YP_002331006.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli O127:H6 str. E2348/69]
 gi|237705973|ref|ZP_04536454.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|306816388|ref|ZP_07450520.1| putative periplasmic binding transport protein; periplasmic-binding
           component of ABC superfamily [Escherichia coli NC101]
 gi|312968401|ref|ZP_07782610.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 2362-75]
 gi|331649069|ref|ZP_08350157.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M605]
 gi|331659557|ref|ZP_08360499.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA206]
 gi|91074273|gb|ABE09154.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli UTI89]
 gi|115514681|gb|ABJ02756.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli APEC O1]
 gi|215266647|emb|CAS11086.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli O127:H6 str. E2348/69]
 gi|222034984|emb|CAP77727.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           LF82]
 gi|226899013|gb|EEH85272.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294494121|gb|ADE92877.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli IHE3034]
 gi|305849953|gb|EFM50412.1| putative periplasmic binding transport protein; periplasmic-binding
           component of ABC superfamily [Escherichia coli NC101]
 gi|307625131|gb|ADN69435.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli UM146]
 gi|312286619|gb|EFR14530.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 2362-75]
 gi|312947826|gb|ADR28653.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|315289024|gb|EFU48422.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 110-3]
 gi|315300933|gb|EFU60153.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 16-3]
 gi|320194754|gb|EFW69384.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli WV_060327]
 gi|323189120|gb|EFZ74404.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli RN587/1]
 gi|323951212|gb|EGB47087.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H252]
 gi|323957584|gb|EGB53298.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H263]
 gi|330909319|gb|EGH37833.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli AA86]
 gi|331042816|gb|EGI14958.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M605]
 gi|331054139|gb|EGI26168.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA206]
          Length = 341

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W + I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAFNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|323498373|ref|ZP_08103373.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
 gi|323316615|gb|EGA69626.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
          Length = 342

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 233/342 (68%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     F  + ++ A S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTAFMATSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S ++L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSATELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|254439839|ref|ZP_05053333.1| lysine-arginine-ornithine-binding periplasmic protein
           [Octadecabacter antarcticus 307]
 gi|198255285|gb|EDY79599.1| lysine-arginine-ornithine-binding periplasmic protein
           [Octadecabacter antarcticus 307]
          Length = 338

 Score =  348 bits (893), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 215/342 (62%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I    + +  A  L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRAL++A+  DP  ++++P   + RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ ++ G+SS   L GA++C+Q GTTTEL LADYF+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPRELGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  A++ AEELG+T  NI +++  T NP++ R LG +    +G  LGL  DW    I
Sbjct: 239 ARWTLNALIAAEELGVTSANIAELANGTDNPEINRLLGTE--GELGAMLGLEADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA+W++GGL+Y+PP R
Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338


>gi|37679741|ref|NP_934350.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus YJ016]
 gi|37198486|dbj|BAC94321.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus YJ016]
          Length = 375

 Score =  348 bits (893), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++       +S +    S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 37  KLTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 96

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+A+++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 97  VEYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 156

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GI S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 157 VNYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 216

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+NI
Sbjct: 217 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNI 276

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GIT KN  ++ K + +P+V+R LG+D     G+ LG+  DW Y+++
Sbjct: 277 AKWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVD--GPKGKGLGIRDDWGYQVV 333

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 334 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 375


>gi|323492614|ref|ZP_08097758.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio brasiliensis LMG 20546]
 gi|323312989|gb|EGA66109.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio brasiliensis LMG 20546]
          Length = 342

 Score =  348 bits (893), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++       ++ +  A S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTALMSTSAAAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL+SA+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALASAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|303256337|ref|ZP_07342353.1| general amino acid ABC transporter, periplasmic binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|302861066|gb|EFL84141.1| general amino acid ABC transporter, periplasmic binding protein
           [Burkholderiales bacterium 1_1_47]
          Length = 340

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L  + L   + +    +L  +K    + CG+NT   GF+   + G+W G D
Sbjct: 1   MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRAL++A+  D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG  F  
Sbjct: 61  VDYCRALAAAVLADANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ KK  + S  QL+GA+ICVQ+GT++E ++ADYFK+H MKY  ++F+  E
Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + RC  YT D+S L   +     P ++VILP++ISK PL P++ +GD EW+ I
Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A + AEE GITQ N +++ K +T+P+V+R LG     ++G+ LGL KDW+YRI+
Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RNLG ++ L +PRG N  W+ GG++YAPP+R
Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340


>gi|302339786|ref|YP_003804992.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301636971|gb|ADK82398.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 365

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 223/354 (62%), Gaps = 18/354 (5%)

Query: 5   FFVSILCLIILFFTSFSTNA----------------SILGDIKKRGFLKCGINTGLVGFA 48
            F+++   I L     S +                 S L  +K+RG +  G+  G+ G++
Sbjct: 14  LFLALFVTIALASCGSSKSEEPAAEESATAAPETGKSTLELVKERGKVIVGVTAGVPGYS 73

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              + G W+GFDVD  RA+++A+  DP  I+  PL+AKERF ALQS +ID+L R T WT 
Sbjct: 74  APDSEGIWQGFDVDLGRAVAAAVLGDPDAIECRPLSAKERFTALQSGEIDVLVRVTTWTA 133

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  LG+ F  + Y+DGQGF++ K  GI+S++ L GA++ VQ+GTTTEL L+DYF+ +N
Sbjct: 134 TRDSQLGVNFAGVNYYDGQGFMVAKDSGITSLADLDGATVAVQSGTTTELNLSDYFRKNN 193

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           M +  I FE+ ++  AA  A R DA T D S LYAL+     P   ++LP++ISK PL P
Sbjct: 194 MDFELITFEKNDQASAALEAGRADAVTSDQSQLYALRTKFKEPENFIMLPELISKEPLGP 253

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
            + QGD EW+NIV WT +AM+ AEE GIT  N++++ + + NP+V+R LG +    + E 
Sbjct: 254 VVRQGDDEWFNIVKWTLFAMLNAEEYGITSDNVDEMKETSDNPNVKRLLGSE--GGVWEG 311

Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GL  +  Y II+++GNYGE F+RNLG+ S L I RG NALW+KGG+ Y  PIR
Sbjct: 312 FGLESNAGYNIIKYIGNYGESFERNLGSGSPLNISRGLNALWTKGGIQYGMPIR 365


>gi|110807125|ref|YP_690645.1| putative periplasmic binding transport protein [Shigella flexneri 5
           str. 8401]
 gi|110616673|gb|ABF05340.1| putative periplasmic binding transport protein [Shigella flexneri 5
           str. 8401]
          Length = 341

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL  F+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|107103377|ref|ZP_01367295.1| hypothetical protein PaerPA_01004447 [Pseudomonas aeruginosa PACS2]
          Length = 338

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 1   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 59  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 119 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 179 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 239 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 297 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 338


>gi|163760315|ref|ZP_02167398.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica
           DFL-43]
 gi|162282714|gb|EDQ33002.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica
           DFL-43]
          Length = 340

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 169/317 (53%), Positives = 238/317 (75%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L D+K +GF++CG++TGL GF+     G+W G DVD CR +++A+F D S +++ PL+A
Sbjct: 27  TLDDVKAKGFVQCGVSTGLAGFSAPNDAGEWSGIDVDLCRGVAAAVFGDASAVKFSPLSA 86

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           KERF ALQS +ID+LSRNT WT+ R+  LGL F  + Y+DGQGF++ K  G++S  QLSG
Sbjct: 87  KERFTALQSGEIDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKSLGVTSALQLSG 146

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           AS+CVQ GTTTEL L DYFKA++M Y+P+VFE++EE++AAY A+RCD YT D S LY+++
Sbjct: 147 ASVCVQTGTTTELNLTDYFKANDMTYNPVVFEKLEEVNAAYDANRCDVYTTDQSGLYSIR 206

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L    P EH++LP++ISK PL P + QGD +W+NIV W H AM+ AEE+GIT  N+++++
Sbjct: 207 LGLSAPDEHMVLPEVISKEPLGPVVRQGDDQWFNIVKWVHNAMLNAEEMGITSANVDEMA 266

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
             + +P+V R LG +     GE +G++ DW Y++++ +GNYGE+F+RN+G  + L I RG
Sbjct: 267 A-SADPNVMRLLGKE--GTFGEGIGVSNDWAYQVVKQVGNYGEVFERNVGASTPLAIDRG 323

Query: 326 YNALWSKGGLMYAPPIR 342
            NALWSKGGL YAPPIR
Sbjct: 324 VNALWSKGGLQYAPPIR 340


>gi|17988694|ref|NP_541327.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 1 str. 16M]
 gi|17984503|gb|AAL53591.1| general l-amino acid-binding periplasmic protein aapj precursor
           [Brucella melitensis bv. 1 str. 16M]
          Length = 331

 Score =  348 bits (892), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 164/334 (49%), Positives = 223/334 (66%), Gaps = 3/334 (0%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L             A  L  +K+RG + CG++ G+ GF+     G W GFD+DFCRA+S
Sbjct: 1   MLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVS 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F    Y+DGQG
Sbjct: 61  AAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQG 120

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           F++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  + I  A+  
Sbjct: 121 FMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSADGILKAFET 180

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NIV WT +A+
Sbjct: 181 GRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNIVRWTLFAL 240

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           + AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+  +GNYGE
Sbjct: 241 LEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIVASVGNYGE 297

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           MF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 MFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 331


>gi|254504317|ref|ZP_05116468.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11]
 gi|222440388|gb|EEE47067.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11]
          Length = 338

 Score =  348 bits (892), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 156/340 (45%), Positives = 228/340 (67%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K+ F S+         +F  +AS L  +K+ G+  CG++ G  GF+   ++G+W G DVD
Sbjct: 2   KNTFKSLAVAAAFSGAAFPASASTLERVKENGYFTCGVSQGNPGFSNPDSDGNWSGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           +CRA+++A+  DP+ +++ PL++ ERF ALQS +ID+LSR T WT+ R+ +LG  F  + 
Sbjct: 62  YCRAIAAAVLGDPAAVKFRPLSSPERFTALQSGEIDVLSRTTTWTMSRDTNLGANFAGVM 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQ  ++ K+ GI+S  +L+GAS+C   GTTTEL +AD+F+ +NM+Y  + FE+ +E+
Sbjct: 122 YYDGQAMMVRKELGITSAMELAGASVCTATGTTTELNVADFFRVNNMEYEVVAFEKNDEV 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             AY A RCD YT D S L+A +L    PSEH+ILP++ISK PL P + QGD +W NI  
Sbjct: 182 TQAYDAGRCDVYTTDKSGLHANRLKLTNPSEHMILPEVISKEPLGPVVRQGDDQWLNIAK 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT   ++ AEELG+TQ N+  + + + NP V+R +G++   N G ALGL +DW  RII  
Sbjct: 242 WTLNVLINAEELGVTQANVADM-ESSDNPAVKRLIGVE--GNFGGALGLDQDWAVRIISA 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F RN+G  + L I RG NA W  GG +YAPP+R
Sbjct: 299 VGNYGEIFVRNVGVDTPLGIERGLNASWIDGGTLYAPPVR 338


>gi|126461167|ref|YP_001042281.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126102831|gb|ABN75509.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 338

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    +   +A+ L D+K RG L CG++TGL GF+   ANG+W GFD
Sbjct: 1   MTKSVFLG--TLTVAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D +K++++P   + RF AL S ++D+L+RN+ WT  R+  L L F  
Sbjct: 59  VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+FK +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E +  Y A  CDAYT D S L A +     P  H+ILP+IISK PL PA+  GD EW +I
Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEE G+T  N+ +++ ++ NP++QR LG+    ++G+ + L  DW  R I
Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRVLGV--QGDLGKMIRLDNDWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F   +G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338


>gi|15599053|ref|NP_252547.1| amino acid-binding protein [Pseudomonas aeruginosa PAO1]
 gi|218889858|ref|YP_002438722.1| putative amino acid-binding protein [Pseudomonas aeruginosa LESB58]
 gi|254236763|ref|ZP_04930086.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719]
 gi|254242550|ref|ZP_04935872.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192]
 gi|9950036|gb|AAG07245.1|AE004803_1 probable amino acid-binding protein [Pseudomonas aeruginosa PAO1]
 gi|126168694|gb|EAZ54205.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719]
 gi|126195928|gb|EAZ59991.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192]
 gi|218770081|emb|CAW25843.1| probable amino acid-binding protein [Pseudomonas aeruginosa LESB58]
          Length = 341

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|27365994|ref|NP_761522.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio vulnificus CMCP6]
 gi|320156509|ref|YP_004188888.1| glutamate aspartate periplasmic binding protein GltI [Vibrio
           vulnificus MO6-24/O]
 gi|27362194|gb|AAO11049.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus CMCP6]
 gi|319931821|gb|ADV86685.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Vibrio vulnificus MO6-24/O]
          Length = 342

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++       +S +    S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+A+++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GI S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GIT KN  ++ K + +P+V+R LG+D     G+ LG+  DW Y+++
Sbjct: 244 AKWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVD--GPKGKGLGIRDDWGYQVV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|313109278|ref|ZP_07795246.1| Putative amino-acid ABC transporter binding protein [Pseudomonas
           aeruginosa 39016]
 gi|310881748|gb|EFQ40342.1| Putative amino-acid ABC transporter binding protein [Pseudomonas
           aeruginosa 39016]
          Length = 341

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|163859070|ref|YP_001633368.1| putative extracellular solute-binding protein [Bordetella petrii
           DSM 12804]
 gi|163262798|emb|CAP45101.1| putative extracellular solute-binding protein [Bordetella petrii]
          Length = 338

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 152/343 (44%), Positives = 226/343 (65%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S++   +L        A+ L  ++KRG L+CG  TG  GF+   A G W+G D
Sbjct: 1   MK--IARSLIGATLLLGAMAGAQAATLDVVQKRGELRCGTTTGFAGFSAPDAQGVWRGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D +KI+ +PLN+++RF ALQS +ID+L+RNT  T  R+ +LG+    
Sbjct: 59  VDLCRAVAAAVFGDANKIKIVPLNSQQRFTALQSGEIDVLTRNTTVTQQRDTALGIIHAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I ++DGQGF++ K  G+ S ++L+GA+IC+Q GT+ E TLAD+ +AHN+ Y P+V E   
Sbjct: 119 INFYDGQGFLVPKSLGVQSATELNGATICLQTGTSNENTLADWARAHNVSYKPVVIETFN 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCD ++ D S L +++      P ++++LP+IISK PL P + QGD  W N
Sbjct: 179 EVVNAFASGRCDVFSTDASGLASIRISKLQNPDDYLVLPEIISKEPLGPFVRQGDDAWLN 238

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W+  AM+ AEE GIT  N++Q  + + NP+++R LG+  +   G  +GL + W Y I
Sbjct: 239 VVHWSLSAMIEAEEYGITSANVDQQLQ-SANPNIRRMLGV--TPGAGANMGLDEKWAYNI 295

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE F+RN+G  S LKI RG NA W++GGLMYA PIR
Sbjct: 296 IKQVGNYGESFERNVGAGSPLKIKRGLNAQWTQGGLMYALPIR 338


>gi|116051889|ref|YP_789268.1| putative amino acid-binding protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115587110|gb|ABJ13125.1| Putative amino-acid ABC transporter binding protei [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 341

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLPATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|307300514|ref|ZP_07580294.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|307318379|ref|ZP_07597814.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306896061|gb|EFN26812.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306904680|gb|EFN35264.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 336

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 229/342 (66%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M            +   T+ +     L  +K+RG L+CG++ G++GF+     G+W GFD
Sbjct: 1   MKTGILALFATAFLAGTTAQAA---TLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+++A    P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+  LG++F  
Sbjct: 58  IDFCRAVAAATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQ F++    G+ SV +LSGAS+C + GTTTE  +ADYF A+ ++Y  I FE+ +
Sbjct: 118 VNYYDGQAFMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKAD 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A+ + RCD Y+ D SALY+ +LT + P   V+LP++ISK PL PA+ QGD +W+ +
Sbjct: 178 QTIQAFNSGRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKV 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEELGIT++N   + +  T    +RFLGID  +  G+ALGL   W Y+ +
Sbjct: 238 VRWTLFAMIEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTV 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+R+LG +S L+I RG N LW+ GGL+YAPP+R
Sbjct: 295 AAVGNYGEIFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 336


>gi|238752136|ref|ZP_04613618.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei
           ATCC 43380]
 gi|238709609|gb|EEQ01845.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei
           ATCC 43380]
          Length = 341

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 230/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDICRAVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE+G+T +N+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 LVRWTLFAMLNAEEMGVTSQNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE F+RN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFERNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|153835228|ref|ZP_01987895.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           harveyi HY01]
 gi|148868294|gb|EDL67426.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           harveyi HY01]
          Length = 342

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT +AMV AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S LKI RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 342


>gi|89901102|ref|YP_523573.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89345839|gb|ABD70042.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 344

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 219/342 (64%), Gaps = 3/342 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 +++  +  F ++ +     L  IK RG + CG+NTGL GF    + G W G DV
Sbjct: 5   KLQTLTAVVATVGAFMSAPAHAGKTLDGIKARGQVVCGVNTGLAGFGAADSAGKWTGLDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D CRA+++A   D  KI+Y+PLNA++RF ALQS ++D+LSRNT +TL R+ SLGL    +
Sbjct: 65  DVCRAIAAATLGDAEKIKYVPLNAQQRFTALQSGEVDVLSRNTTFTLTRDASLGLHDTAV 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           TY+DGQGF++  K  I S  QL G ++CVQ+GTTTE  L DY KA+ +   P+VFE++E 
Sbjct: 125 TYYDGQGFMVPVKSKIKSAKQLKGQTVCVQSGTTTEKNLTDYSKANGLNIKPVVFEKLEA 184

Query: 182 IDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            + AY   RC AYT D S L + +      P EH+ILP++ISK PL P + +GD EW+ I
Sbjct: 185 AENAYFTGRCIAYTTDASGLASTRNKVAKDPKEHIILPELISKEPLGPMVRRGDDEWFAI 244

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W  Y ++ AEE GITQ N+  +   + +P VQR LG   S + G+ LGL+KDW    I
Sbjct: 245 VKWVIYGLLEAEEYGITQANLEGLKATSKDPVVQRILGT--SEDSGKLLGLSKDWMANAI 302

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F+RN+G  S L +PRG N  W+KGGLMYA P+R
Sbjct: 303 KATGNYGEIFERNVGPNSPLGLPRGVNNQWNKGGLMYAYPVR 344


>gi|330862829|emb|CBX72970.1| putative amino-acid ABC transporter-binding protein yhdW [Yersinia
           enterocolitica W22703]
          Length = 341

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+ +++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|254451978|ref|ZP_05065415.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Octadecabacter
           antarcticus 238]
 gi|198266384|gb|EDY90654.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Octadecabacter
           antarcticus 238]
          Length = 338

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 213/342 (62%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I    + +  A  L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRAL++A+  DP  ++++P   + RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 59  VGLCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ +  G+SS   L GA++C+Q GTTTEL LADYF+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPRALGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  A++ AEELG+T  NI +++  T NP++ R LG +    +G  LGL  DW  + I
Sbjct: 239 ARWTLNALIAAEELGVTSANIAEMASGTDNPEINRLLGSE--GELGAMLGLESDWAMKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NALW+ GGL+Y PP R
Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNALWTDGGLVYTPPFR 338


>gi|262394189|ref|YP_003286043.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
 gi|262337783|gb|ACY51578.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
          Length = 342

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342


>gi|261252934|ref|ZP_05945507.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
 gi|260936325|gb|EEX92314.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
          Length = 342

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     L  TS S   S L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTALMSTSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+ L++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQGLAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLAAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|118589034|ref|ZP_01546441.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Stappia aggregata IAM 12614]
 gi|118438363|gb|EAV44997.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Stappia aggregata IAM 12614]
          Length = 326

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/316 (52%), Positives = 229/316 (72%), Gaps = 3/316 (0%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+K +GF++CG++ GL GF+   A G+W G DVD+CRA+++A+F D S ++Y PL+AK
Sbjct: 14  LEDVKAKGFIQCGVSQGLPGFSNPDAQGNWTGIDVDYCRAMAAAVFGDASAVKYTPLSAK 73

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           ERF ALQS ++D+LSRNT WT+ R+  LGL F  + Y+DGQGF++ K  G++S  +LSGA
Sbjct: 74  ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALELSGA 133

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           S+C   GTTTEL +ADYF+A+NM Y  + FE+ +E+ AAY A RCD YT D S LYA +L
Sbjct: 134 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 193

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               P +H++LP+IISK PL P + QGD EW+NI  WT  AM+ AEELG+T +N++++ K
Sbjct: 194 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMLNAEELGVTSENVDEM-K 252

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
            + NP ++R LG++     GEA+GL  DW Y II+++GNY E F+ N+G  + L I RG 
Sbjct: 253 SSDNPSIKRLLGVE--GAFGEAIGLPNDWAYAIIKNVGNYEESFNANVGPDTPLGISRGV 310

Query: 327 NALWSKGGLMYAPPIR 342
           NALW+ GG MYAPP+R
Sbjct: 311 NALWNDGGFMYAPPVR 326


>gi|156974643|ref|YP_001445550.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116]
 gi|156526237|gb|ABU71323.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116]
          Length = 350

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 12  KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 72  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 132 VNYYDGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 192 QTSKGFDAGRCDILTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNI 251

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT +AMV AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 252 AKWTLFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 308

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S LKI RG NALW+ GG MYAPPIR
Sbjct: 309 KQVGNYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 350


>gi|75906963|ref|YP_321259.1| extracellular solute-binding protein [Anabaena variabilis ATCC
           29413]
 gi|75700688|gb|ABA20364.1| L-glutamate-binding protein / L-aspartate-binding protein / neutral
           amino acid-binding protein [Anabaena variabilis ATCC
           29413]
          Length = 356

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 224/357 (62%), Gaps = 18/357 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG---------------DIKKRGFLKCGINTGLV 45
           M K   +    LI         +A                    IK RG L CG++  + 
Sbjct: 3   MNKLVIILGASLIFTTTACGGDSAPTTDASTNSGGTLVANRWNTIKNRGQLICGVSGEVP 62

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           GF+ V  NG++ G DVD CRA+++A+FD+P  +++  L+AKERF ALQ+ ++DILSRNT 
Sbjct: 63  GFSFVGTNGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTT 122

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           WTL R  S+GL F P+ ++DGQ  ++ K   I S++ L   +ICVQ GTTTE  LAD  +
Sbjct: 123 WTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMR 182

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             N+ Y P+VFE V    A Y   RCDA T D SAL + + T  +P ++V+L ++IS  P
Sbjct: 183 KRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPKPEDNVVLDEVISSEP 242

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           LAPA+ +GD +W + V+W  YA++  EELGI  +N+ Q    + +PDV+RFLG +   ++
Sbjct: 243 LAPAVAKGDAKWSDTVNWVVYALIKGEELGINSQNLGQF-TTSNDPDVKRFLGTE--GDL 299

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G+ LGLT D+  RII+H+GNYGE++DRNLG +++L + RG N LWSKGGL+Y+PP R
Sbjct: 300 GQGLGLTNDFAARIIKHVGNYGELYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 356


>gi|332163168|ref|YP_004299745.1| ABC transporter periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318603946|emb|CBY25444.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325667398|gb|ADZ44042.1| ABC transporter periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 341

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+ +++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|67922406|ref|ZP_00515917.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
 gi|67855750|gb|EAM50998.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
          Length = 350

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 142/355 (40%), Positives = 225/355 (63%), Gaps = 18/355 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVGFA 48
           M+ K +F+ I  L+ +  T+    +             L  IK+RG L CG+N  + GF+
Sbjct: 1   MFNKPYFILIALLLTMPLTACGGGSQTSDNPTPTSSSRLDTIKQRGTLICGVNGEVPGFS 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V  NG + G DVD CRA+++A+FDDP K++Y  L+A+ERF A+QS ++D+L+RNT WT+
Sbjct: 61  FVDENGQYSGLDVDVCRAIAAALFDDPEKVEYRKLSAQERFPAVQSGEVDVLNRNTTWTI 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+ + G+ F P  ++DGQG ++    G++ +  L+G SICV AGTTTE  LAD  +   
Sbjct: 121 SRDTTNGMEFAPTIFYDGQGIMVTTASGVTDIQGLAGKSICVLAGTTTEQNLADQMRKKG 180

Query: 169 M-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           +  Y+P+ F+ V+ + AAY+  RC+  T D S L A +      ++H IL  ++SK PL 
Sbjct: 181 ITDYNPVTFDDVDALYAAYQQGRCEGVTADRSQLVARRSILPNSNDHNILNVVLSKEPLG 240

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
           PA+   D++W++ V W  ++++ AEE GI  +N+    K + +P+++RFLG+D    +GE
Sbjct: 241 PAVKNNDSDWFDAVKWITFSLIQAEEFGINSENLATFEK-SEDPNIRRFLGLDD--KLGE 297

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GL  D+  R+++H+GNYGE++DRN+G    L + RG N LW++GGL+Y+PP R
Sbjct: 298 GIGLPNDFASRVVKHVGNYGEVYDRNIGK--PLGLERGPNQLWTEGGLLYSPPFR 350


>gi|269968795|ref|ZP_06182784.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
 gi|269826607|gb|EEZ80952.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
          Length = 350

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 12  KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 72  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 132 VNYYDGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 192 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 251

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K +T+P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 252 AKWTLSAMINAEEYGISSKNADEMLK-STDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 308

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 309 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 350


>gi|91227965|ref|ZP_01262075.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
 gi|91188286|gb|EAS74584.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
          Length = 342

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K +T+P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-STDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342


>gi|317401305|gb|EFV81945.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans
           C54]
          Length = 338

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 147/340 (43%), Positives = 226/340 (66%), Gaps = 4/340 (1%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           +    ++   +L   +    A+ L  +++RG + CG  TG  GF+   A G W+G DVD 
Sbjct: 2   NIAKGLVGAALLLAVAQGAQAATLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDL 61

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRA+++A+F D +KI+ +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+    I +
Sbjct: 62  CRAIAAAVFGDANKIKVVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINF 121

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K  G+ S  +++GA+IC+Q GT+ E TLAD+ +A+N+ Y P+V E   E+ 
Sbjct: 122 YDGQGFLVPKSLGVKSAKEINGATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVV 181

Query: 184 AAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A+ A RCD ++ D S L +++      P ++V+LP+IISK PL P + QGD  W NIV 
Sbjct: 182 NAFAAGRCDVFSTDASGLASIRISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W+  AM+ AEE G+T +N+++ +K ++NP+++R LG+      G  LGL + W Y I++ 
Sbjct: 242 WSLSAMIEAEEYGVTSRNVDEQAK-SSNPNIKRILGVTPGG--GANLGLDEKWAYNIVKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+RN+G  S LKI RG NA W++GGLMYA PIR
Sbjct: 299 VGNYGESFERNVGQGSPLKIKRGLNAQWTQGGLMYALPIR 338


>gi|144899134|emb|CAM75998.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 340

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 154/341 (45%), Positives = 235/341 (68%), Gaps = 3/341 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F    +   +   +  +     +  +K +GF++CG+N GL GF+     G+W G DVD
Sbjct: 2   KAFKACAIAATLAVTSMPAWAGPTVDAVKAKGFVQCGVNLGLYGFSAPDDKGNWSGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++A+F D SK++Y PL+A++R  ALQS +ID+L+RNT WTL R+ + GL F    
Sbjct: 62  ACRAVAAAVFGDASKVKYTPLSAQQRLPALQSGEIDLLARNTTWTLSRDTANGLNFTVTN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++  K G+ +  +L+GA++CV  GTTTE  LAD+F+A+ M Y P+V E+ EE+
Sbjct: 122 YYDGQGFMVPTKLGVKAAKELNGATVCVLPGTTTEQNLADWFRANKMTYKPVVIEKNEEL 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
            +A+ A RCD YT D S L A++      P++++ILP++ISK PLA A+  GD +W ++V
Sbjct: 182 ASAFIAGRCDVYTSDASQLAAIRANEMPNPADYLILPELISKEPLAVAVRHGDDQWMDVV 241

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            W+ YAM+ AEE G+T  N++Q++  + +P+++R LG+  ++  G+ALGL + W   II+
Sbjct: 242 RWSIYAMIAAEEKGVTMANVDQMAASSPDPEIKRLLGV--TAGNGKALGLDEAWAKTIIK 299

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE FDRN+G+ S+LKI RG NAL+++GGLMYAPP +
Sbjct: 300 QVGNYGESFDRNVGSGSKLKIARGQNALYTQGGLMYAPPFK 340


>gi|123444011|ref|YP_001007981.1| ABC transporter periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090972|emb|CAL13855.1| Putative ABC transporter periplasmic solute binding protein
           [Yersinia enterocolitica subsp. enterocolitica 8081]
          Length = 341

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+ +++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|89070522|ref|ZP_01157811.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           granulosus HTCC2516]
 gi|89043829|gb|EAR50027.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           granulosus HTCC2516]
          Length = 339

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 154/343 (44%), Positives = 219/343 (63%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + ++ A+ L D+K RG L CG++TGL GF+   ANG W+GFD
Sbjct: 1   MKKSVFLG--ALTVAGLAAGASAAATLDDVKARGTLNCGVSTGLTGFSAPDANGVWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V FCRAL++A+  DP+ ++++P   + RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAFCRALAAAVLGDPNAVEFVPTTGQTRFTALSSNEIDVLARNTTWTFSRDNDLKFEFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+ ++ G++S  +L GA++C+Q GTTTEL LAD+F+ ++M+Y P+  E   
Sbjct: 119 VNYYDGQGFIVPRELGVASAMELDGATVCIQTGTTTELNLADFFRVNDMEYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CDAYT D S L A + T + P +HVILP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDAYTTDASGLAATRATFENPEDHVILPEIISKEPLGPLVRHGDPEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A++ AEE G+T  NI Q++ +  +  +V R LG +    +G  +GL  DW  R 
Sbjct: 239 VRWTLQALIAAEEYGVTSANIEQMASEAGDNAEVNRLLGTE--GELGAMIGLDSDWAQRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F+ N+G  S + + RG NA +S GGL+YA P R
Sbjct: 297 IAAGGNYGEIFENNIGESSPVGLARGLNAQYSNGGLIYALPFR 339


>gi|254504024|ref|ZP_05116175.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia
           alexandrii DFL-11]
 gi|222440095|gb|EEE46774.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia
           alexandrii DFL-11]
          Length = 325

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 163/316 (51%), Positives = 227/316 (71%), Gaps = 3/316 (0%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+K +GF++CG++ GL GF+   A G+W G DVD CRA+++A+F D S +++ PL+AK
Sbjct: 13  LEDVKGKGFIQCGVSQGLPGFSNPDAQGNWTGLDVDLCRAMAAAVFGDASAVKFTPLSAK 72

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           ERF ALQS ++D+LSRNT WT+ R+  LGL F  + Y+DGQGF++ K  G++S  ++SGA
Sbjct: 73  ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALEMSGA 132

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           S+C   GTTTEL +ADYF+A+NM Y  + FE+ +E+ AAY A RCD YT D S LYA +L
Sbjct: 133 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 192

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               P +H++LP+IISK PL P + QGD EW+NI  WT  AM+ AEELG+T  N++++ K
Sbjct: 193 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMINAEELGVTSANVDEM-K 251

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
            + NP V+R LG +     GEA+GL+ DW Y I++++GNY E F+ N+G  + L I RG 
Sbjct: 252 ASDNPSVKRLLGAE--GAFGEAIGLSNDWAYNIVKNVGNYEESFNANVGPDTPLGISRGV 309

Query: 327 NALWSKGGLMYAPPIR 342
           NALWS GG +YAPP+R
Sbjct: 310 NALWSNGGFLYAPPVR 325


>gi|238789893|ref|ZP_04633673.1| Extracellular solute-binding protein, family 3 [Yersinia
           frederiksenii ATCC 33641]
 gi|238721966|gb|EEQ13626.1| Extracellular solute-binding protein, family 3 [Yersinia
           frederiksenii ATCC 33641]
          Length = 341

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+  ++   + PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPSTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+KGGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNKGGLQYAPPVR 341


>gi|224371700|ref|YP_002605864.1| amino acid-binding periplasmic amino acid binding protein
           [Desulfobacterium autotrophicum HRM2]
 gi|223694417|gb|ACN17700.1| amino acid-binding periplasmic amino acid binding protein
           [Desulfobacterium autotrophicum HRM2]
          Length = 332

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 146/334 (43%), Positives = 221/334 (66%), Gaps = 2/334 (0%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ +++  F      A  L D++ +  L CGI+ G+ GF+   + G W GFDVD  RA++
Sbjct: 1   MIFIMMGAFPCTGPWAGTLEDVRAKDVLTCGISEGIPGFSIPDSTGKWVGFDVDMARAVA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +A+  DP KI+++PL +K++ +A+ S Q+D+ SR T WTL R+   G+ F  I ++DGQG
Sbjct: 61  AAVLSDPQKIKFVPLASKQKIIAVSSGQVDLTSRTTTWTLKRDGKQGVDFTKIVFYDGQG 120

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           F++ K  G+ S +++ GA++CV AGTT+EL LAD+ +A+ +K   +VF+  +E   AY  
Sbjct: 121 FMVKKALGVDSATKIDGATVCVTAGTTSELNLADFARANGLKIEALVFDGKKEALNAYAT 180

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RCD +T D+S L +L+ T   P++H I+P++ISK PLAP +  GD +W +IV+W    +
Sbjct: 181 GRCDCFTTDVSQLASLRTTLPNPNDHEIMPEVISKEPLAPLVRHGDNQWKDIVTWVLNGL 240

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           V AEE GIT  N+ ++ + + NP VQR LG  KS + G  +GL KDW  R+I+ +GNYGE
Sbjct: 241 VAAEEYGITSANVLEMKEKSENPVVQRMLG--KSGDTGSYIGLDKDWMVRVIQAVGNYGE 298

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++DR+ G  + L IPRG N LW+KGGL YA PIR
Sbjct: 299 IYDRHFGPATALNIPRGVNRLWTKGGLQYALPIR 332


>gi|15966449|ref|NP_386802.1| putative amino acid-binding periplasmic signal peptide protein
           [Sinorhizobium meliloti 1021]
 gi|15075720|emb|CAC47275.1| Putative amino acid-binding periplasmic signal peptide protein
           [Sinorhizobium meliloti 1021]
          Length = 331

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 155/334 (46%), Positives = 229/334 (68%), Gaps = 3/334 (0%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +      F    +  A+ L  +K+RG L+CG++ G++GF+     G+W GFD+DFCRA++
Sbjct: 1   MALFATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +A    P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+  LG++F  + Y+DGQ 
Sbjct: 61  AATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQA 120

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           F++    G+ SV +LSGAS+C + GTTTE  +ADYF A+ ++Y  I FE+ ++   A+ +
Sbjct: 121 FMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFNS 180

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RCD Y+ D SALY+ +LT + P   V+LP++ISK PL PA+ QGD +W+ +V WT +AM
Sbjct: 181 GRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAM 240

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           + AEELGIT++N   + +  T    +RFLGID  +  G+ALGL   W Y+ +  +GNYGE
Sbjct: 241 IEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTVAAVGNYGE 297

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +F+R+LG +S L+I RG N LW+ GGL+YAPP+R
Sbjct: 298 IFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 331


>gi|312881587|ref|ZP_07741365.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370650|gb|EFP98124.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 342

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 228/342 (66%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +      L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASSALIATHAFAAGDTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL+SA+  D  K++Y+PL AKERF ALQS ++D+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALASAVLGDKKKVKYVPLTAKERFTALQSGEVDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GAS+CVQ+GTTTEL LADYF+   MKY P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMKYRPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GI+ KN +++ K + +P+++R LG++     G+ LG+  DW Y+I+
Sbjct: 244 AKWTLAAMVNAEEYGISSKNADEMLK-SKDPNIRRILGVE--GPKGKGLGIRDDWGYQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGQGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|307152419|ref|YP_003887803.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
 gi|306982647|gb|ADN14528.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
          Length = 356

 Score =  345 bits (884), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 142/357 (39%), Positives = 220/357 (61%), Gaps = 22/357 (6%)

Query: 3   KDFFVSILCLIILFFT--------------SFSTNASI--LGDIKKRGFLKCGINTGLVG 46
           +   V+++ L+                   +   N     L  IK RG L CG+N  + G
Sbjct: 5   RYLLVAVILLVTSLTACGEGTNNAGNSNTQASPANGETSRLDTIKARGTLICGVNGEVPG 64

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F+ V   G ++G DVD CRA+++A+FDDP+K+++  L A++RF A+QS ++DIL+RNT W
Sbjct: 65  FSFVDEKGQFEGLDVDMCRAVAAALFDDPNKVEFRKLTAEQRFTAVQSGEVDILNRNTTW 124

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           TL R+ S G+ F P T++DGQG ++ K  GI+ +  L G SICV +GTTTE  LAD  + 
Sbjct: 125 TLSRDTSTGMEFGPTTFYDGQGMMVTKASGITKLEDLKGKSICVLSGTTTEQNLADQMRK 184

Query: 167 HNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             +  Y P+  + V+++ AAY+  RC+  T D S L A +    +P +H++L  ++SK P
Sbjct: 185 RGVTAYTPVASDDVDQLYAAYQEGRCEGITSDRSQLVARRSVLPKPQDHIVLDVVMSKEP 244

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           L   +  GD++W++ V W  YA++  EELGI  KNI    K + +P+V+RFLG++    +
Sbjct: 245 LGTLVADGDSKWFDTVKWITYAVIEGEELGINSKNIANFDK-SQDPNVRRFLGLE--GTL 301

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G+ +GL  D+  R+I+H+GNYGE+++RN+G    L + RG N LW+ GGL+Y+PP R
Sbjct: 302 GQDMGLPNDFAARVIKHVGNYGEIYERNIGK--PLGLERGPNRLWTNGGLLYSPPFR 356


>gi|238794642|ref|ZP_04638248.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia
           ATCC 29909]
 gi|238726031|gb|EEQ17579.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia
           ATCC 29909]
          Length = 341

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGLGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|28898394|ref|NP_797999.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839329|ref|ZP_01991996.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ3810]
 gi|260366020|ref|ZP_05778498.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus K5030]
 gi|260876625|ref|ZP_05888980.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AN-5034]
 gi|260898001|ref|ZP_05906497.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus Peru-466]
 gi|260901584|ref|ZP_05909979.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ4037]
 gi|28806611|dbj|BAC59883.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|149747161|gb|EDM58149.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ3810]
 gi|308088041|gb|EFO37736.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus Peru-466]
 gi|308094322|gb|EFO44017.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AN-5034]
 gi|308108540|gb|EFO46080.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ4037]
 gi|308114193|gb|EFO51733.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus K5030]
 gi|328473628|gb|EGF44463.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 10329]
          Length = 342

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTILASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y+++
Sbjct: 244 AKWTLAAMVNAEEYGITSKNADEMLK-SQDPNIKRILGVD--GPKGKGLGIRDDWGYQVV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGKGSPLEIARGVNALWNAGGFMYAPPIR 342


>gi|24114551|ref|NP_709061.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|24053744|gb|AAN44768.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|281602643|gb|ADA75627.1| putative periplasmic binding transport protein [Shigella flexneri
           2002017]
          Length = 341

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 155/343 (45%), Positives = 230/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL  F+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ + NY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|319779135|ref|YP_004130048.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Taylorella equigenitalis MCE9]
 gi|317109159|gb|ADU91905.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Taylorella equigenitalis MCE9]
          Length = 336

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 226/343 (65%), Gaps = 8/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L +  L   S    A  L  +K RG + CG  TG  GF+     G+W+G D
Sbjct: 1   MKK----LSLLIAGLVLASTQVQADTLETVKSRGHVVCGTTTGFAGFSAPNDKGEWEGLD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD C+++++A+F D SK + +PLN+++RF ALQS +IDIL+RNT  T  R+ ++GL    
Sbjct: 57  VDLCKSIAAAVFGDASKFKTVPLNSQQRFTALQSGEIDILTRNTTVTQQRDTAIGLMSPG 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+ S  +L GA++C+Q GT+ E T+AD+ +A+ + Y P+VF++  
Sbjct: 117 VNFYDGQGFLIKKDLGVKSAKELDGATVCMQTGTSNENTMADWARANKITYKPVVFDQFN 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCD +T D S L +++      P ++V+LP+IISK PL P + Q D +W+N
Sbjct: 177 EVVNAFASGRCDVFTTDASGLASIRISKLSNPDDYVVLPEIISKEPLGPFVRQSDDKWFN 236

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W  +A   AEELGIT KN+++  K++TNP+VQR LG+  +   G+ LGL++DW Y++
Sbjct: 237 IVKWVMHAQWNAEELGITSKNVDE-QKNSTNPNVQRLLGV--TEGSGKNLGLSEDWAYQV 293

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE FDRN+G  S LK+PRG N L++ GGL Y  PIR
Sbjct: 294 IKQVGNYGESFDRNVGKDSVLKVPRGLNKLYTDGGLHYGLPIR 336


>gi|84685382|ref|ZP_01013280.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666539|gb|EAQ13011.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 338

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +  F + S +A+ L D++ RG LKCG N+GL GFA   ANG W+GFD
Sbjct: 1   MKKSVFLG--ALTVAGFVAGSASAATLDDVQARGSLKCGSNSGLTGFAAPDANGHWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++P   K RF AL S ++DIL RNT WTL R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDPEAVEFVPTTPKTRFTALASGEVDILVRNTTWTLTRDVDLKFTFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+ K  G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFIVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRTNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P++H ILP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDTYTTDASGLAATRASFENPADHAILPEIISKEPLGPLVRHGDDEWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+V AEE GIT  NI +++  T NP++ R LG +    +GE LGL  DW  + I
Sbjct: 239 VRWTLNALVAAEEFGITSTNIEELASGTDNPEINRILGTE--GTMGEMLGLEADWAMKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA W  GGL YAPP R
Sbjct: 297 AAGGNYGEIFEKNIGESTPIGLARGLNAQWKDGGLQYAPPFR 338


>gi|238798512|ref|ZP_04641991.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii
           ATCC 43969]
 gi|238717674|gb|EEQ09511.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii
           ATCC 43969]
          Length = 341

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K  F +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMFSTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE+G+T KN+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 VVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|330429782|gb|AEC21116.1| putative extracellular solute-binding protein [Pusillimonas sp.
           T7-7]
          Length = 338

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 149/343 (43%), Positives = 222/343 (64%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +    +L  +  + +A  L  +K+RG + CG+ TG  GF+   A G W+G D
Sbjct: 1   MRK--FKYVAGAAVLAASFSAAHADTLDVVKERGVVHCGVTTGFAGFSAPDAKGVWQGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A   D  K + +PL++++RF ALQS +ID+L+RNT  T  R+ +LG     
Sbjct: 59  VDLCRAVAAATLGDAEKFKAVPLSSQQRFTALQSGEIDLLARNTTVTQQRDTALGAISAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+SS  +L GAS+C+Q GT+ E T+AD+ +A+N+ Y P+V E+  
Sbjct: 119 VNFYDGQGFLVPKSLGVSSAKELDGASVCMQTGTSNENTMADWARANNITYKPVVIEQFN 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ A RCD +T D S L +++      P ++ +LP+IISK PL P + QGD  W N
Sbjct: 179 EVVNAFAAGRCDVFTTDASGLASIRISKLSNPDDYQVLPEIISKEPLGPFVRQGDDRWLN 238

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W+  AM+ AEELGIT  N+++  K + NP+V+R LG+  +   G+ LG+ + W Y I
Sbjct: 239 VVKWSLQAMIGAEELGITSANVDEQLK-SENPNVKRLLGV--TEGAGKNLGVDEKWAYNI 295

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE FDRN+G  S L+I RG NA W+ GGLMY  P+R
Sbjct: 296 IKQVGNYGESFDRNVGKGSPLQIERGLNAQWTDGGLMYGLPVR 338


>gi|239815922|ref|YP_002944832.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239802499|gb|ACS19566.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 344

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 154/320 (48%), Positives = 220/320 (68%), Gaps = 3/320 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  +K+RG +KCG+  G+ GF+     G+W G DVD CRA+++A+  DP K+ ++PL
Sbjct: 27  GKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTCRAIAAAVLGDPKKVDFVPL 86

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           N+++RF ALQ+ +IDIL+RNT WTL R+ SLG  F  ITY+DGQGF++ KK  ++S  QL
Sbjct: 87  NSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTITYYDGQGFLVPKKLKVTSAKQL 146

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
             A+IC Q+GTT E  ++DYF+A N+    +VFE  E    A+ + RC A+T D SAL  
Sbjct: 147 KNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFESFEASFKAFFSGRCQAFTTDASALAG 206

Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           L+      P ++VILP++ISK PLAP + +GD EW+ I  W   A++ AEE G+TQ N +
Sbjct: 207 LRNKEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKWVPNALIEAEEFGVTQANAD 266

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           ++   + +P  QR LG     ++G+ LGL KDW++R I+ +GNYGEMF+RN+G +S LK+
Sbjct: 267 ELKAGSKDPAQQRLLGA--GEDLGKLLGLDKDWSFRAIKAVGNYGEMFERNVGPKSVLKL 324

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LW+KGGL+YAPP+R
Sbjct: 325 PRGSNNLWNKGGLIYAPPVR 344


>gi|49087174|gb|AAT51425.1| PA3858 [synthetic construct]
          Length = 342

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L   K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAGKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|238782940|ref|ZP_04626968.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri
           ATCC 43970]
 gi|238716143|gb|EEQ08127.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri
           ATCC 43970]
          Length = 341

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKTIISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPPIR
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNSGGLQYAPPIR 341


>gi|300718662|ref|YP_003743465.1| L-amino acid ABC transporter, solute-binding protein [Erwinia
           billingiae Eb661]
 gi|299064498|emb|CAX61618.1| L-amino acid ABC transporter, solute-binding protein [Erwinia
           billingiae Eb661]
          Length = 341

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 164/343 (47%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVAAAALFAVANQAHAGTTLDAIKKKGFIQCGISDGLPGFSFADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A    RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDTGRCDTLASDQSQLYALRIKLGKPNEFIVLPEVISKEPLGPVVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GIT  N++Q++   TNPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGITSANVDQLAAKPTNPDMAHLLGSE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNY E+FDRN+G  S+LKI RG NALW+KGG+ YAPP+R
Sbjct: 299 VKQVGNYQEVFDRNVGKDSQLKIARGQNALWNKGGIQYAPPVR 341


>gi|209695504|ref|YP_002263433.1| general L-amino acid-binding periplasmic protein precursor
           [Aliivibrio salmonicida LFI1238]
 gi|208009456|emb|CAQ79742.1| general L-amino acid-binding periplasmic protein precursor
           [Aliivibrio salmonicida LFI1238]
          Length = 342

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 163/339 (48%), Positives = 230/339 (67%), Gaps = 3/339 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F +I     L  T  +     L  + K G+L+CG++TGL GF+   + G+W+G DV++
Sbjct: 7   TLFAAIATSAALLSTQATAADGTLEKVVKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEY 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C+A+++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  + Y
Sbjct: 67  CQAVAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNY 126

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K+ G++S  +L GAS+CVQ+GTTTEL LADYF+ ++M+Y P+VF+   +  
Sbjct: 127 YDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNSMEYKPVVFDTAAQTS 186

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             + A RCD  T D S LYAL+L    P    ILP+IISK PL P + QGD +W+NI  W
Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQILPEIISKEPLGPVVRQGDDKWFNINKW 246

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
              AM+ AEE GIT  N +Q+ K + +P+++R LG+D     G+ LG+  DW Y++I+ +
Sbjct: 247 VLSAMINAEEYGITSANADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQV 303

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE F+R +G  S L+I RG NALW+ GG MYA PIR
Sbjct: 304 GNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAAPIR 342


>gi|209524398|ref|ZP_03272947.1| extracellular solute-binding protein family 3 [Arthrospira maxima
           CS-328]
 gi|209495189|gb|EDZ95495.1| extracellular solute-binding protein family 3 [Arthrospira maxima
           CS-328]
          Length = 355

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 140/355 (39%), Positives = 222/355 (62%), Gaps = 16/355 (4%)

Query: 2   YKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVGF 47
            + F + + CL  L  T+                +  S L  +K RG L CG++ G+ GF
Sbjct: 3   KRGFLLLVSCLSALSLTACEPGGSPGSDGLAAGGSGQSRLNVVKNRGVLICGVDGGIPGF 62

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           + V  +G++ G DVD C+A+++A+FDDP+ +QY  L++ ERF A+++ ++D+LSRNT WT
Sbjct: 63  SFVDQSGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRAGEVDMLSRNTTWT 122

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           L R+ S+G+ F P T+ DGQG ++    GI+S+      ++CV+AGTTTEL L D  +  
Sbjct: 123 LSRDTSVGMEFAPTTFHDGQGMMVRADSGITSLEDFQDRAVCVEAGTTTELNLTDNMRER 182

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            + +  + F++ +   AAY   RC+  T D S L A + T   P++H+IL   +SK PL 
Sbjct: 183 GITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEPLG 242

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
           P  +  D+ W++ V W  +A+  AEELGITQ N+ ++++ + NP ++RFLG++   ++G 
Sbjct: 243 PVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEEIAQTSENPTIRRFLGVE--GDLGT 300

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GLT D+  R+IRH+GNY E++DRNLG  S+  +PR  N LW+ GGL+++PP R
Sbjct: 301 GMGLTNDFAARVIRHVGNYAEVYDRNLGAGSQFNLPRNENELWTNGGLLFSPPFR 355


>gi|163800832|ref|ZP_02194732.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
 gi|159175181|gb|EDP59978.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
          Length = 342

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 165/339 (48%), Positives = 225/339 (66%), Gaps = 3/339 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                I     +  T+       L  + K+GFL CG++TGL GF+   A G+W+G DV++
Sbjct: 7   ILASVIAASTTMLATTAHAADGTLEKVTKQGFLNCGVSTGLPGFSNPNAKGEWEGIDVEY 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C+AL++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y
Sbjct: 67  CQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNY 126

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K   +SS   L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +  
Sbjct: 127 YDGQGFMVKKDLEVSSAKDLDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTS 186

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             + A RCD  T D S LYAL+L  + PS   +LP+IISK PL P + QGD  W+NI  W
Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLEDPSSATVLPEIISKEPLGPVVRQGDDRWFNIAKW 246

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T   MV AEE GI+ KN++++ K + +P+++R LG+D     G+ LG+  DW Y++I+ +
Sbjct: 247 TLATMVNAEEYGISSKNVDEMKK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQV 303

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE F+R +G  S L I RG NALW+ GG MYAPPIR
Sbjct: 304 GNYGESFERTVGTASPLNISRGVNALWNAGGFMYAPPIR 342


>gi|284052552|ref|ZP_06382762.1| extracellular solute-binding protein [Arthrospira platensis str.
           Paraca]
          Length = 355

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 143/357 (40%), Positives = 223/357 (62%), Gaps = 17/357 (4%)

Query: 1   MYKDFFVSIL-CLIILFFTSF----------STNASI----LGDIKKRGFLKCGINTGLV 45
           M K  FV +  CL  L  T+                     L  +K RGFL CG++ G+ 
Sbjct: 1   MRKWSFVLLASCLSALSLTACEPGGSPGSDGPAAGGTGQSRLNVVKNRGFLICGVDGGIP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           GF+ V  +G++ G DVD C+A+++A+FDDP+ +QY  L++ ERF A++S ++D+LSRNT 
Sbjct: 61  GFSFVDESGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRSGEVDMLSRNTT 120

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           WTL R+ S+G+ F P T++DGQG ++    GI+++      ++CV+AGTTTEL L D  +
Sbjct: 121 WTLSRDTSVGMEFAPTTFYDGQGMMVRADSGITTLEDFQDLAVCVEAGTTTELNLTDNMR 180

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
              + +  + F++ +   AAY   RC+  T D S L A + T   P++H+IL   +SK P
Sbjct: 181 ERGITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEP 240

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           L P  +  D+ W++ V W  +A+  AEELGITQ N+ Q+++ + NP ++RFLG++   ++
Sbjct: 241 LGPVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEQIAQTSENPTIRRFLGVE--GDL 298

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +GLT D+  R+I+H+GNY E++DRNLG  S+  +PR  N LW+ GGL+++PP R
Sbjct: 299 GTGMGLTNDFAARVIKHVGNYAEVYDRNLGTGSQFNLPRNENELWTNGGLLFSPPFR 355


>gi|89053118|ref|YP_508569.1| lysine-arginine-ornithine-binding periplasmic protein [Jannaschia
           sp. CCS1]
 gi|88862667|gb|ABD53544.1| L-glutamine-binding protein / L-glutamate-binding protein /
           L-asparagine-binding protein / L-aspartate-binding
           protein [Jannaschia sp. CCS1]
          Length = 338

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 152/342 (44%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L     S     LG++++RG L CG++TGL GF+   ANG+W+GFD
Sbjct: 1   MKKSVFLGTLAVAGLSAGFVSAQ--TLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D   ++++P   + RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VSVCRAVAAAVLGDAGAVEFVPTTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ ++ G+SS  +L GA++C+Q GTTTEL LADYF ++NM Y P+  E   
Sbjct: 119 VNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLADYFSSNNMSYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + PS HV+LP+I+SK PL P +  GD E+ ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEELG+T  N+ ++   T NP+++R LG +   N+GE LGL   W    I
Sbjct: 239 VRWTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTE--GNLGEMLGLDAGWAAAAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+FDR++G  + + + RG NA W+ GGL+YAPP R
Sbjct: 297 GAGGNYGEIFDRHIGESTPIGLARGLNAQWTDGGLLYAPPFR 338


>gi|149908408|ref|ZP_01897071.1| general L-amino acid-binding protein [Moritella sp. PE36]
 gi|149808571|gb|EDM68506.1| general L-amino acid-binding protein [Moritella sp. PE36]
          Length = 337

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 228/342 (66%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L +        NA+ L  + K+G L CG++TG+ GF+   + G WKG D
Sbjct: 1   MK--VTKIALILGLASTLPNLVNAATLEQVMKKGVLNCGVSTGIPGFSATDSKGVWKGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCR++++A+  D SK++Y+PL AKERF ALQS +ID+LSR + WT  R+ SLGL F  
Sbjct: 59  VDFCRSVAAAVLGDASKVKYIPLTAKERFTALQSGEIDLLSRASTWTATRDTSLGLNFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G++S  +L GAS C+QAGTTTEL L DYFK++NM+Y  + F+   
Sbjct: 119 VNYYDGQGFLVKKEIGVTSAKELDGASFCIQAGTTTELNLTDYFKSNNMEYKAVTFDTSG 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A++  RCDA T D S LY L++  D P   ++LPDIISK PL P + QGD  W+N+
Sbjct: 179 QTIDAFKKGRCDAVTSDASQLYGLRIKLDDPKSAIVLPDIISKEPLGPVVRQGDDAWFNV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A + AEELG+T  N+++  K + NP V+R LG+  +   GE LGL  DW Y+I+
Sbjct: 239 VRWSLFATLEAEELGVTASNVDKQLK-SNNPSVKRLLGV--TGKAGENLGLKSDWAYQIV 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNY EMFD N+G  S L I RG N LW+KGGLMYA PIR
Sbjct: 296 KQVGNYEEMFDNNVGKNSPLNIDRGLNNLWNKGGLMYAMPIR 337


>gi|307546909|ref|YP_003899388.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307218933|emb|CBV44203.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 342

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 163/339 (48%), Positives = 223/339 (65%), Gaps = 2/339 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              V++    +   T+ S +A+ L ++K+RG L CG+N GL GF+    +G W+G DV+ 
Sbjct: 6   KALVALSLATLALGTAASASAATLDEVKERGELHCGVNVGLAGFSSSDEDGTWQGLDVET 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRA+SSAIF DP K+ + PL AKERF ALQS +ID+LSRNT WT  R+ SLGL F   T+
Sbjct: 66  CRAVSSAIFGDPEKVAFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTF 125

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K+ GI S+  L GASIC+Q+GTT EL LADYF + N+    + F+  ++  
Sbjct: 126 YDGQGFMVDKELGIESLEDLDGASICIQSGTTHELNLADYFPSRNIDIKTVTFDTPDQTA 185

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             + + RCD  T D S L AL+L    P    IL ++ISK PL P + QGD +W+NI+ W
Sbjct: 186 QGFASGRCDVLTSDTSQLSALRLQLPEPDSVEILTELISKEPLGPVVRQGDDQWFNIIKW 245

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T +AMV AEE+G+   N++++ +D  NP V R LG+D     GE LGL  DW Y II  +
Sbjct: 246 TIFAMVNAEEMGVNSDNVDEMKQDPPNPGVARLLGVD--GTYGEQLGLGNDWAYNIISQV 303

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F   +G  S L I RG NALW++GG++YAPP+R
Sbjct: 304 GNYGEVFADTVGENSPLGISRGMNALWNEGGILYAPPVR 342


>gi|259416581|ref|ZP_05740501.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
 gi|259348020|gb|EEW59797.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
          Length = 335

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 143/334 (42%), Positives = 211/334 (63%), Gaps = 3/334 (0%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L + ++  ++ +  A  L ++K+RG L CG+  GL GFA +  +G W G +V FCRAL++
Sbjct: 4   LTVALVALSAGTAMAGTLEEVKERGKLICGVYPGLPGFAFLSEDGTWMGSEVAFCRALAA 63

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+  DP+ ++++P  +K RF AL S ++D+L+RNT WT  R++ L   F  + Y+DGQGF
Sbjct: 64  AVLKDPTAVEFVPTPSKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFAGVNYYDGQGF 123

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K+ G++S  +L GA++C+Q GTTTEL LAD+F+A+ + Y P+  E   E    Y A 
Sbjct: 124 LVPKELGVTSAKELDGATVCIQTGTTTELNLADFFRANGISYEPVPVETNAESQQQYLAG 183

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            CD YT D + L A +     P  H+ILP+ ISK PL P +  GD +W ++V WT  A++
Sbjct: 184 ACDVYTTDKAGLAATRSAFADPQNHLILPETISKEPLGPLVRHGDNQWGDVVRWTLNALI 243

Query: 250 TAEELGITQKNINQVSKD-TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
            AEELGITQ N+  ++   T NP++ R LG +     GE LGL +DW    I   GNYGE
Sbjct: 244 IAEELGITQDNVTALAASATNNPEINRMLGTE--GTYGEMLGLDQDWAVAAISAGGNYGE 301

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +F R LG  + + + RG NAL+  GG++YAPP R
Sbjct: 302 IFARFLGEDTLIGLDRGLNALYRDGGILYAPPFR 335


>gi|218437710|ref|YP_002376039.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
 gi|218170438|gb|ACK69171.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
          Length = 362

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 142/356 (39%), Positives = 217/356 (60%), Gaps = 22/356 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLVGF 47
            F +    L++   T+     +                 L  +K RG + CGIN  + GF
Sbjct: 12  RFLLVAAMLLVTPLTACGGGNNTAGDTTAQTSTSGGTSRLDTVKARGTVICGINGEVPGF 71

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           + V   G + G DVD CRA+++A+FDDP+K+++  L A +RF A+QS ++DIL+RNT WT
Sbjct: 72  SFVDEQGQYSGLDVDMCRAVAAALFDDPTKVEFRKLTADQRFTAVQSGEVDILNRNTTWT 131

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           + R+ S+G+ F P T++DGQG ++ K  GI+ +  L G S+CV +GTTTE  LAD  +  
Sbjct: 132 ISRDTSVGMDFAPTTFYDGQGIMVTKASGITKLEDLKGKSVCVLSGTTTEQNLADQMRKR 191

Query: 168 NM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            +  Y PI  + V+++ AAY+  RC+  T D S L A +    +P +HV+L  ++SK PL
Sbjct: 192 GIEDYTPIASDDVDQLYAAYQEGRCEGVTSDRSQLVARRSVLPKPEDHVVLDVVLSKEPL 251

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
            P +  GD++W + + W  YA + AEELGI  +NI +  K + +P+V+RFLG +    +G
Sbjct: 252 GPVVADGDSQWSDTIKWITYATIEAEELGINSQNIGEFEK-SEDPNVKRFLGSE--GTLG 308

Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           E +GL  D+  R+I+H+GNY E++DRN+G    L + RG N LW+ GGL+Y+PP R
Sbjct: 309 EDMGLNNDFATRVIKHVGNYEEIYDRNIGK--PLGLERGPNQLWTNGGLLYSPPFR 362


>gi|298292513|ref|YP_003694452.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296929024|gb|ADH89833.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 337

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 228/342 (66%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L    +  T+   +A  L D+K RG LKCG++ GL GF+     G W GFD
Sbjct: 1   MNR--IAFALAAAGIVMTAGLGHADTLADVKARGTLKCGVSQGLAGFSAKDDKGQWSGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA++SAIFDD SK++Y+PL+A  RF ALQ  +ID+LSRN+ WT+ RE  L L F  
Sbjct: 59  VDLCRAVASAIFDDASKVEYVPLSADARFPALQKGEIDLLSRNSTWTMQREADLKLLFAA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQGF++   K + +  +L  + +C Q+GTT+     D+FK +NM    I    V+
Sbjct: 119 VSYYDGQGFLVPVAKKVDTALELDKSKVCTQSGTTSVGNAKDFFKQNNMALELIELPTVD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+  AY   +CD  T D+S LYAL+L   +P+++++LPD+ISK PL P + QGD  W N 
Sbjct: 179 EVVKAYDEGKCDVLTTDVSQLYALRLRLAKPADYIVLPDVISKEPLGPVVRQGDDAWLNA 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YA++ AEELGI+Q  ++Q  K +  PDVQRF+G D   + GE LGLTKDW  RI+
Sbjct: 239 VKWSFYALLNAEELGISQATLDQALK-SQKPDVQRFVGTD--GSYGEQLGLTKDWAVRIV 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G QS+L IPRG N LWS GG+ YAPPIR
Sbjct: 296 KNVGNYGEVFERNIGAQSKLGIPRGINQLWSAGGIQYAPPIR 337


>gi|262274329|ref|ZP_06052140.1| amino acid ABC transporter amino acid-binding protein [Grimontia
           hollisae CIP 101886]
 gi|262220892|gb|EEY72206.1| amino acid ABC transporter amino acid-binding protein [Grimontia
           hollisae CIP 101886]
          Length = 381

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 154/327 (47%), Positives = 221/327 (67%), Gaps = 3/327 (0%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                +   + L  +KK G + CG+ TGL GF+   +NG W+G DV+FC+A+++A+  D 
Sbjct: 58  APAPSAQGENTLEKVKKSGVISCGVGTGLPGFSNPNSNGAWEGIDVEFCQAMAAAVLGDK 117

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++Y+PL AKERF ALQS +IDILSRNT WTL R+ +LGL F  + Y+DGQGF++ K  
Sbjct: 118 DKVKYVPLTAKERFTALQSGEIDILSRNTTWTLQRDGTLGLNFVGVNYYDGQGFMVKKDL 177

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G+ S  +L GAS+CVQ+GTTTEL L+DYF+++ M + P+V++  +     + + RCD  T
Sbjct: 178 GVKSALELDGASVCVQSGTTTELNLSDYFRSNGMSFKPVVYDTYDATVKGFESGRCDTLT 237

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S LYA ++    P   V+LP+IISK PL P + QGD  W+NI  WT   M+  EE G
Sbjct: 238 TDQSGLYASRIKLADPDSAVVLPEIISKEPLGPVVRQGDDNWFNIAKWTLNTMINGEEFG 297

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           IT  N++++  ++ +P+++R LG D     G+ LGL  DW Y++I+ +GNYGE F R +G
Sbjct: 298 ITSANVDEMV-NSKDPNIRRILGQD--GPKGKGLGLNDDWGYQVIKQVGNYGESFQRTVG 354

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
           + S L+I RG NALWS+GG++YAPPIR
Sbjct: 355 SGSPLQISRGVNALWSEGGILYAPPIR 381


>gi|187476710|ref|YP_784733.1| amino acid-binding periplasmic protein [Bordetella avium 197N]
 gi|115421296|emb|CAJ47801.1| amino acid-binding periplasmic protein [Bordetella avium 197N]
          Length = 338

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 154/344 (44%), Positives = 224/344 (65%), Gaps = 8/344 (2%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      S++ L  L  T   S  A  L  +K R  + CG  TG  GF+   A G W+G 
Sbjct: 1   MK---IASLVALAALSLTGLQSAQAGTLDVVKNRDAVVCGTTTGFAGFSAPDAQGVWRGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+  D +KI+ +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+   
Sbjct: 58  DVDLCRAVAAAVLGDANKIKIVPLNSQQRFTALQSGEVDVLTRNTSVTQQRDTALGIIHA 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I ++DGQGF++ KK G+ S  +L+GA+IC+Q GT+ E TLAD+ +A+N++Y P+V E  
Sbjct: 118 GINFYDGQGFLVPKKLGVKSAKELNGATICLQQGTSNENTLADWARANNVQYTPVVIETF 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E+  A+ A RCD ++ D S L +++    ++P ++++LP++ISK PL P + QGD  W 
Sbjct: 178 NEVVNAFAAGRCDVFSTDASGLASIRISKLEKPDDYIVLPEVISKEPLGPFVRQGDDNWL 237

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           NIV WT  AM+ AEE G+T  N+++  K + NP+V+R LG+      G  +GL   W Y 
Sbjct: 238 NIVYWTLTAMIEAEEYGLTSANVDEQLK-SENPNVRRILGVVP--GAGPNMGLNDKWAYN 294

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++ +GNYGE FDRN+G  S LKI RG NA W+KGGLMYA PIR
Sbjct: 295 IVKQVGNYGESFDRNVGKGSPLKIDRGLNAQWTKGGLMYALPIR 338


>gi|328543624|ref|YP_004303733.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Polymorphum gilvum SL003B-26A1]
 gi|326413367|gb|ADZ70430.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 300

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 161/303 (53%), Positives = 219/303 (72%), Gaps = 3/303 (0%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           ++ GL GF+   A G+W G DVD CRA+++A+F D S +++ PL+AKERF ALQS +IDI
Sbjct: 1   MSQGLPGFSNPDAQGNWTGLDVDVCRAVAAAVFGDASAVKFTPLSAKERFTALQSGEIDI 60

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           LSRNT WT+ R+ SLGL F  +TY+DGQGF++ K  G++S  +LSGAS+C   GTTTEL 
Sbjct: 61  LSRNTTWTMSRDTSLGLNFAGVTYYDGQGFMVRKALGVTSALELSGASVCTNTGTTTELN 120

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           +ADYF+ +NM Y  + FE+ +E+  AY A RCD +T D S LYA +L    P +H++LP+
Sbjct: 121 VADYFRTNNMPYEIVAFEKSDEVVQAYDAGRCDVFTTDASGLYAERLKLSNPGDHMVLPE 180

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
           IISK PL P + QGD +W+NI  WT  AM+ AEELG+T  N++++ K + NP+++R LGI
Sbjct: 181 IISKEPLGPVVRQGDDQWFNIARWTLNAMINAEELGVTSANVDEM-KSSENPEIKRLLGI 239

Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAP 339
           +     GE + L+ DW Y II+ +GNYGE FDRN+G  + L I RG NALWSKGG++YAP
Sbjct: 240 E--GAFGEGVSLSNDWAYNIIKQVGNYGEAFDRNVGPDTPLGIARGLNALWSKGGILYAP 297

Query: 340 PIR 342
           PIR
Sbjct: 298 PIR 300


>gi|119383545|ref|YP_914601.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Paracoccus denitrificans PD1222]
 gi|119373312|gb|ABL68905.1| L-aspartate-binding protein / L-glutamate-binding protein /
           L-glutamine-binding protein / L-asparagine-binding
           protein [Paracoccus denitrificans PD1222]
          Length = 341

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 226/343 (65%), Gaps = 3/343 (0%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K  FF S+  + +    + +     L ++K RG L CG+NTGL+GFA   ANG+W GF
Sbjct: 1   MKKSVFFGSVTAVALAASGALAAEGDTLKEVKARGVLNCGVNTGLIGFAAPDANGNWSGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV FC+A+++A+  D +KI+Y+P   + RF AL S ++D+L+RN+ WT  R+  L L F 
Sbjct: 61  DVAFCKAMAAAVLGDATKIKYVPTTGQTRFTALSSGEVDLLARNSTWTFQRDTDLKLDFI 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DGQGF++ K  G+SS  +L+GA+IC+Q GTTTEL LADYFKA+NM Y P+  +  
Sbjct: 121 GVNYYDGQGFMVRKDLGVSSAKELNGATICIQTGTTTELNLADYFKANNMDYQPVNIDSN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E +  Y A  CDAYT D S L A + +   P  H+ILP+IISK PL PA+  GD  W +
Sbjct: 181 AEGEQQYMAGACDAYTTDASGLAATRASFADPENHIILPEIISKEPLGPAVRHGDNNWGD 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           I  WT YA++ AEE G+T  NI++++K + NP+VQR LG   + ++G+ +GL  +W  R 
Sbjct: 241 IARWTLYALIAAEEYGVTSANIDELAKSSQNPEVQRLLGT--TDDLGKMIGLDAEWAKRA 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE+F   +G Q+ + + RG NA W++GGLMYA P R
Sbjct: 299 IKAGGNYGEIFAATIGEQTPIGLARGLNAQWTQGGLMYAMPFR 341


>gi|282899899|ref|ZP_06307860.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195169|gb|EFA70105.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis
           raciborskii CS-505]
          Length = 378

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 232/354 (65%), Gaps = 15/354 (4%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F +  +  +I+                     +  G +K    L CG++  L GF+
Sbjct: 28  MAKSFLLLAVAPLIIALLGCNSSPTSSTSTSTVQPRNTTGKVKTNLRLVCGVSGELPGFS 87

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V+ +  + G DVD CRA+S+A+FD+P K+++  L+AKERF ALQ+ ++D+LSRNT WT 
Sbjct: 88  FVQTDSKYAGIDVDVCRAVSAALFDNPDKVEFRNLSAKERFTALQTGEVDLLSRNTTWTF 147

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+ S+GL F P+  +DGQG ++ K  GI+S++ L   +IC Q GTTTE  LAD  +   
Sbjct: 148 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRRRG 207

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           + Y P+VFE +    A Y   RCDA T D SAL + + T  +P ++++L +++S  PLAP
Sbjct: 208 ISYKPVVFEDINVTFATYSEGRCDAITADRSALISRRTTLPKPEDNIVLNELLSSEPLAP 267

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
           A+ QGD +W+NIV W+ YA++ AEELGI  +NI+Q   ++ +P+++RFLG +   N+G+ 
Sbjct: 268 AVAQGDPQWHNIVKWSVYALIKAEELGINSQNISQF-ANSKDPEIKRFLGTE--GNLGQG 324

Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GLT D+  RII+H+GNYGE++DR+LG++++L +PRG N L+SKGGL+Y+PP R
Sbjct: 325 IGLTNDFAARIIKHVGNYGEIYDRSLGSKTKLNLPRGQNELYSKGGLLYSPPFR 378


>gi|260772752|ref|ZP_05881668.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           metschnikovii CIP 69.14]
 gi|260611891|gb|EEX37094.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           metschnikovii CIP 69.14]
          Length = 340

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 170/339 (50%), Positives = 230/339 (67%), Gaps = 5/339 (1%)

Query: 6   FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             +++C + L  T+    AS   L  +  +G L CGI+TGL GF++  A G W+G DVD+
Sbjct: 5   LATLVCAVSLSLTTHLAFASPTTLDRVLTQGKLTCGISTGLAGFSDADAKGQWQGLDVDY 64

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRAL++A+  D +K++Y+PL A+ERF ALQS Q+D+LSRNT WT  R+ ++GL F  + +
Sbjct: 65  CRALAAAVLGDKNKVEYVPLTARERFNALQSGQVDVLSRNTTWTFERDTTMGLNFVGVNF 124

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ KK  I+ VSQL+   ICVQ+ TTT+L L DYF+ H M Y P+VF+   +I 
Sbjct: 125 YDGQGFMVTKKSAITQVSQLNNRPICVQSETTTKLNLDDYFRHHGMSYQPVVFDTAIQIA 184

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A+ A RC A T D S LYAL+L   +P   +ILP+IISK PL P I +GD  W NI  W
Sbjct: 185 RAFNAERCVAVTADKSGLYALRLNLAKPDSAIILPEIISKEPLGPVIREGDDRWLNITRW 244

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T  AM+ AEELGIT  N++Q  K +TNP+++R LG++    IG  LG+  DW Y+II+ +
Sbjct: 245 TLAAMINAEELGITSANVDQQRK-STNPEIRRLLGVE--GEIGRPLGINNDWAYQIIKQV 301

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNY E F RN+G  S L IPRG NALW+ GG+MYA PIR
Sbjct: 302 GNYSESFQRNVGEDSPLAIPRGLNALWNAGGIMYATPIR 340


>gi|254486168|ref|ZP_05099373.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter sp. GAI101]
 gi|214043037|gb|EEB83675.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter sp. GAI101]
          Length = 338

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 156/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   + +  L   + +     L D+K+RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MNKSVFFGAMTVAGLVAGASAAA--TLDDVKERGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+F DP+ ++++P   K RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVFGDPTAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L + + T + P +H+ILP+IISK PL P +  GD +W ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRATFETPGDHIILPEIISKEPLGPLVRHGDNDWGDL 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W  YA++ AEELG+T  N+ +++  TTNP+V R LG +    +GE LGL+ DW    I
Sbjct: 239 TRWVLYALIAAEELGVTSANVEEMATSTTNPEVARLLGAE--GTLGEMLGLSADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R
Sbjct: 297 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 338


>gi|17231656|ref|NP_488204.1| periplasmic amino acid-binding protein of amino acid ABC
           transporter [Nostoc sp. PCC 7120]
 gi|17133299|dbj|BAB75863.1| periplasmic amino acid-binding protein of amino acid ABC
           transporter [Nostoc sp. PCC 7120]
          Length = 369

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 156/357 (43%), Positives = 222/357 (62%), Gaps = 18/357 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---------------IKKRGFLKCGINTGLV 45
           M K   +    LI         +A                    IK RG L CG++  + 
Sbjct: 16  MNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTIKNRGQLICGVSGEVP 75

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           GF+ V  +G++ G DVD CRA+++A+FD+P  +++  L+AKERF ALQ+ ++DILSRNT 
Sbjct: 76  GFSFVGTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTT 135

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           WTL R  S+GL F P+ ++DGQ  ++ K   I S++ L   +ICVQ GTTTE  LAD  +
Sbjct: 136 WTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMR 195

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             N+ Y P+VFE V    A Y   RCDA T D SAL + + T   P ++V+L ++IS  P
Sbjct: 196 KRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPTPEDNVVLDEVISSEP 255

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           LAPA+ +GD +W N V+W  YA++  EELGI  +N+ Q    + +PDV+RFLG +   ++
Sbjct: 256 LAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQF-TTSNDPDVKRFLGTE--GDL 312

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G+ LGLT D+  RII+H+GNY E++DRNLG +++L + RG N LWSKGGL+Y+PP R
Sbjct: 313 GQGLGLTNDFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 369


>gi|242280380|ref|YP_002992509.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242123274|gb|ACS80970.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 336

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 150/338 (44%), Positives = 226/338 (66%), Gaps = 5/338 (1%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F  S +CL+I+   S    A  L ++KK GFLK G +    GF+ + +NG   GFDVDF 
Sbjct: 4   FRTSFICLMIVAMASI-AQAGTLDNVKKDGFLKAGTHIENPGFSALDSNGKRVGFDVDFI 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA+++A+  +  +I+Y PL +KER  ALQS +IDILSR T  T+ R++ LGL F   T +
Sbjct: 63  RAVAAAV--NVPEIKYTPLTSKERLPALQSGEIDILSRTTTHTMSRDVKLGLDFTVTTLY 120

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQG ++ K+ GI+    L GA++C+Q G+TTEL ++D+F+ + M + P+VF++  ++  
Sbjct: 121 DGQGMMVRKELGITDAKDLDGATVCLQTGSTTELNISDFFRKNGMSFTPVVFDKQPDVRK 180

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           AY   RCD +T D+S L A +   ++P+EH+IL ++ISK PL P +  GD +W +IV WT
Sbjct: 181 AYDTGRCDVHTTDVSGLAAQRSLMEKPAEHIILSEVISKEPLGPVVRHGDNQWSDIVRWT 240

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            +  + AEE G+TQ N+ ++  ++ +P+VQR LG  K+ ++   LGL KD   RII+ +G
Sbjct: 241 IWLTMAAEEKGVTQANVEKMFANSKDPEVQRMLG--KTGSLWTDLGLDKDAPVRIIKTVG 298

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NYGE+FDRNLG ++ L++ RG N  W++GGL+YAPP R
Sbjct: 299 NYGEIFDRNLGPKTPLRMERGLNKQWNEGGLIYAPPFR 336


>gi|220910023|ref|YP_002485334.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219866634|gb|ACL46973.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 364

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 145/326 (44%), Positives = 210/326 (64%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T+       L  I  RG L CG++  L GF+ V   G++ G DVD CRA+++A+FDDP 
Sbjct: 42  TTADLQGTGRLATILNRGQLICGVSGELPGFSFVDQQGNYAGLDVDVCRAIAAALFDDPE 101

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +++  LNAKERF ALQ+ +IDILSRNT  T+ R+ ++G+ F P+ ++DGQG ++  + G
Sbjct: 102 AVEFRNLNAKERFTALQTGEIDILSRNTTLTMSRDTAIGIQFAPVVFYDGQGIMVRNQDG 161

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+  L G SIC+Q GTT E  L D  +   + Y P++FE +  + A Y   RC A + 
Sbjct: 162 IRSLKDLQGKSICLQTGTTHEQNLTDQTRKLGIDYQPVIFEDINTMFATYAQGRCQAVSA 221

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L + + T   P+ + ILPD++SK PLAPA+ +GD  W  +V W  Y+++ AEELGI
Sbjct: 222 DRSGLISRRTTLPNPNGNEILPDVLSKEPLAPAVAKGDPTWSTVVEWIIYSLIEAEELGI 281

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T +NI    + + +P ++RFLG +   N+G  LGL+ D+  RII+ +GNYGE++DRNLG 
Sbjct: 282 TTQNIESKLQ-SADPTLRRFLGRE--GNLGHGLGLSNDFAVRIIKGVGNYGEIYDRNLGP 338

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            + L + RG N  WSKGGL+Y+PP R
Sbjct: 339 NTLLNLERGLNQQWSKGGLLYSPPFR 364


>gi|254462559|ref|ZP_05075975.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206679148|gb|EDZ43635.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 347

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 214/343 (62%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     + +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 9   MKKSVFFG--AMTVAALAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A   DPS ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 67  VGVCRAVAAAALGDPSAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LADYF+ +N+ Y P+  E   
Sbjct: 127 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADYFRTNNISYEPVPIETNA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y    CD YT D S L A +   + P +HV+LP+IISK PL P +  GD+EW ++
Sbjct: 187 EAQPLYLEGACDVYTTDASGLAATRAAFENPGDHVVLPEIISKEPLGPLVRHGDSEWGDV 246

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V W+  A++ AEELG+T  NI  ++    + P++ R LG +    +GE LGL  DW  + 
Sbjct: 247 VRWSLNALIAAEELGVTSANIADMAAAAGDNPEINRLLGTE--GTLGEMLGLDADWAKKA 304

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G  + + + RG NA W+ GGL+Y PP R
Sbjct: 305 IMAGGNYGEIFEKNIGENTPIGLGRGLNAQWTDGGLLYVPPFR 347


>gi|33591762|ref|NP_879406.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama
           I]
 gi|33599230|ref|NP_886790.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica
           RB50]
 gi|33571405|emb|CAE44886.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama
           I]
 gi|33575276|emb|CAE30739.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica
           RB50]
          Length = 338

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 217/324 (66%), Gaps = 4/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                + L  +KKRG + CG  TG  GF+     G W+G DVD CRA+++A+F D SKI+
Sbjct: 18  AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S
Sbjct: 78  VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E   E+  A+ + RCD ++ D S
Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197

Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
            L +++    ++P ++V+LP+IISK PL P + QGD  W NIV W+  AM+ AEE G+T 
Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N+++  K + NP+V+R LG+  +   G  LGL + W Y II+ +GNYGE F+RN+G  S
Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG NA W++GGLMYA PIR
Sbjct: 315 PLKIQRGLNAQWTQGGLMYALPIR 338


>gi|222526721|ref|YP_002571192.1| extracellular solute-binding protein family 3 protein [Chloroflexus
           sp. Y-400-fl]
 gi|222450600|gb|ACM54866.1| extracellular solute-binding protein family 3 [Chloroflexus sp.
           Y-400-fl]
          Length = 389

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/328 (45%), Positives = 219/328 (66%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+       +  I  RG L CG+N   L GFA V + G ++GFD+DFCRA+++A+FDD
Sbjct: 65  GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K 
Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            GI ++  + GA+ICVQ GTTTEL LAD F+A  + + P+VF   +   AAY A +CD +
Sbjct: 185 SGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D S L +       P++H IL   +SK PL PA+ QGD +W++ V W  +A   AEE 
Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           GIT +N++Q    +  P+++RFLGI+    +G  +GL  D+  R++RH+GNY E+++RNL
Sbjct: 305 GITSQNLDQFL-GSDVPEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +   +PRG NAL+++GGL+Y+PP R
Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389


>gi|88797541|ref|ZP_01113130.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
 gi|88779713|gb|EAR10899.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
          Length = 331

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 156/331 (47%), Positives = 220/331 (66%), Gaps = 3/331 (0%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
             + L        AS L D++K GFLKCG++TG+ GF+    NG+W G DVD CRA+++A
Sbjct: 3   VAVALSLAFSLAQASTLNDVRKTGFLKCGVSTGIPGFSNPDRNGNWTGLDVDVCRAVAAA 62

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +  K++Y+PL   +RF ALQS +ID+LSR T WT  R+ +L + F  ++++DGQGF+
Sbjct: 63  VLGNAEKVRYIPLTPGDRFNALQSGEIDVLSRITTWTHSRDTTLDIIFAGVSFYDGQGFM 122

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + +  GI S  +L GA+ICVQ GTTTE  LADYF+ H ++Y P+ F   +     ++A R
Sbjct: 123 VREDAGIRSPQELDGAAICVQKGTTTEQNLADYFREHGLRYQPVSFTSSDRAINGFKAGR 182

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           C A T D S LYA +   D PS   ILP +ISK PL PA+ Q D +WYNIV W  +A+V 
Sbjct: 183 CSAVTSDRSQLYAQRTKLDDPSSARILPTVISKEPLGPAVRQDDMQWYNIVKWCLFALVN 242

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           AEELG+T  N++++ K +  P VQR LG++   + G A+GL  DW Y II  +GNY E++
Sbjct: 243 AEELGVTSANVDEMRK-SNKPVVQRLLGVNS--DTGRAMGLASDWGYNIISQVGNYQEIY 299

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           D N+G  SEL+I RG N+LWSKGG+++APP+
Sbjct: 300 DGNVGKDSELEIDRGLNSLWSKGGILFAPPL 330


>gi|56751276|ref|YP_171977.1| polar amino acid transport system substrate-binding protein
           [Synechococcus elongatus PCC 6301]
 gi|81299057|ref|YP_399265.1| extracellular solute-binding protein [Synechococcus elongatus PCC
           7942]
 gi|56686235|dbj|BAD79457.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus elongatus PCC 6301]
 gi|81167938|gb|ABB56278.1| extracellular solute-binding protein, family 3 [Synechococcus
           elongatus PCC 7942]
          Length = 359

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 140/334 (41%), Positives = 209/334 (62%), Gaps = 5/334 (1%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
                   + + + S L  ++ RG L CG+   L GF+ + + G++ G DVD C+A+++A
Sbjct: 29  AACRSLGGNETESNSRLNQVQARGKLLCGVEGRLPGFSFLDSQGNYSGLDVDICKAIAAA 88

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA--FRPITYFDGQG 128
           +F+DP  I+Y  L++ ERF AL S ++D+LSRNT WTL R+   G    F P T++DGQG
Sbjct: 89  LFNDPKAIEYRSLDSVERFPALASGEVDLLSRNTTWTLSRDAKGGNNLEFAPTTFYDGQG 148

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++ +  GI S+    G SICV+ GTT+EL LAD  +   ++Y  I F   +   AAY  
Sbjct: 149 LMVRRNSGIQSLQDFQGKSICVETGTTSELNLADTMRELGVQYQEIKFPNSDANYAAYAQ 208

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RC+  T D S L A + T     +H +L  +ISK PL+PA +  D+ W+++V W   A 
Sbjct: 209 GRCEGVTSDRSQLAARRTTLSDADQHQLLDAVISKEPLSPATLNNDSPWFDVVKWVVNAT 268

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           + AEE GITQ NI+Q  K + NP+++RFLG++    +G+ LGL+ D+ YR I+ +GNYGE
Sbjct: 269 IQAEEFGITQANIDQF-KTSKNPEIRRFLGLE--GELGQQLGLSNDFAYRAIKAVGNYGE 325

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++RN+G QS LK+ RG N L+  GGL+Y+PP R
Sbjct: 326 IYERNVGQQSPLKLNRGLNQLYKNGGLLYSPPFR 359


>gi|163848771|ref|YP_001636815.1| extracellular solute-binding protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|163670060|gb|ABY36426.1| extracellular solute-binding protein family 3 [Chloroflexus
           aurantiacus J-10-fl]
          Length = 389

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+       +  I  RG L CG+N   L GFA V + G ++GFD+DFCRA+++A+FDD
Sbjct: 65  GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K 
Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            GI ++  + GA+ICVQ G+TTEL LAD F+A  + + P+VF   +   AAY A +CD +
Sbjct: 185 SGIETLEDMDGATICVQTGSTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D S L +       P++H IL   +SK PL PA+ QGD +W++ V W  +A   AEE 
Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           GIT +N++Q    +  P+++RFLGI+    +G  +GL  D+  R++RH+GNY E+++RNL
Sbjct: 305 GITSQNLDQFL-GSDVPEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +   +PRG NAL+++GGL+Y+PP R
Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389


>gi|197336291|ref|YP_002156345.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           fischeri MJ11]
 gi|197317781|gb|ACH67228.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           fischeri MJ11]
          Length = 342

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 163/345 (47%), Positives = 231/345 (66%), Gaps = 6/345 (1%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       F +I     L        +  L  ++K G+L+CG++TGL GF+   + G+W+
Sbjct: 1   MKFKTNTLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL 
Sbjct: 61  GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K+ G++S  +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+
Sbjct: 121 FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + A RCD  T D S LYAL+L    P    +LP+IISK PL P + QGD +W
Sbjct: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  W   AM+ AEE  I+ KN +Q+ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 241 FNINKWVLNAMINAEEYDISSKNADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++++ +GNYGE F+R +G  S L+I RG NALW+ GG MYA PIR
Sbjct: 298 QVVKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAAPIR 342


>gi|110678761|ref|YP_681768.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter denitrificans OCh 114]
 gi|109454877|gb|ABG31082.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter denitrificans OCh 114]
          Length = 338

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L I    + +  A  L D+K RG L CG+ TGLVGFA   A+G+W GFD
Sbjct: 1   MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + PS+HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPSDHVLLPEIISKEPLGPLVRHGDDEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  N+++++  + NP+V+R LG +    +GE LGL  DW  R I
Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGTE--GTLGEMLGLDADWAMRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W+ GGL+Y+PP R
Sbjct: 297 ASQGNYGEIFAKNIGEDTPIALSRGLNAQWTNGGLIYSPPFR 338


>gi|288959842|ref|YP_003450182.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288912150|dbj|BAI73638.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 356

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 143/335 (42%), Positives = 208/335 (62%), Gaps = 4/335 (1%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           ++   I L  T  +     L  IK RG +K G+     GF    +NG W+GF VDF RAL
Sbjct: 26  ALSLAIGLALTGAAKAGPTLDAIKARGSIKVGV-GTQPGFFSPDSNGRWQGFFVDFGRAL 84

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           S A+F+DP K+Q++  + ++R  ALQS + DIL      T  R   LG  F P+ ++DGQ
Sbjct: 85  SIAVFNDPDKVQFVSSSPQQRLPALQSGEFDILLSGVTQTFTRATKLGFHFGPVVFYDGQ 144

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           G ++ KK G++    L+GA++CVQ GTT EL + D+F+ + + + P+V E   E   A+ 
Sbjct: 145 GLLVPKKLGVAKGKDLNGATVCVQTGTTGELNITDFFRQNKIAFKPVVIEETAENQKAFS 204

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           + RCD  T D S L   +    +P ++V+LP+ ISK PLAPAI  GD +W  IV+W  YA
Sbjct: 205 SGRCDVLTQDASDLAITRTQLPKPDDYVLLPERISKEPLAPAIRYGDDQWLEIVNWAVYA 264

Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307
            + AEELGITQ NI+     + +P ++RFLG+D S  +GEA  L   + Y I++ +GNYG
Sbjct: 265 TIQAEELGITQANIDSFL-TSADPTIRRFLGVDPS--LGEAAKLDPKFAYTIVKTVGNYG 321

Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           E+FDRN+G  +++ + RG+N LW++GGL+YAPP R
Sbjct: 322 EIFDRNVGPATKVGLDRGFNKLWTQGGLLYAPPFR 356


>gi|319957434|ref|YP_004168697.1| amino acid ABC transporter substrate-binding protein, paat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319419838|gb|ADV46948.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 338

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 159/315 (50%), Positives = 225/315 (71%), Gaps = 2/315 (0%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            D+KK G LKCG+NTGL GF+E  + G W+G DVD+CRAL++ +  D SK++Y+PLNAKE
Sbjct: 26  DDVKKAGILKCGVNTGLPGFSEADSKGQWRGLDVDYCRALAAVVLGDASKVKYVPLNAKE 85

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           RF ALQS +ID+LSRNT  T  R+ SLG+ F  + Y+DGQGF++ K  G+ S  +L GA+
Sbjct: 86  RFTALQSGEIDVLSRNTTNTETRDTSLGINFTGVMYYDGQGFMVPKSLGVKSAKELDGAT 145

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C+QAGTTTEL LADYF+A++MK+  I F+  +++  A+ A RCD  T D S LYA +  
Sbjct: 146 VCIQAGTTTELNLADYFRANHMKFKAITFDTNDQVTKAFEAGRCDVLTTDASGLYATRTK 205

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
              P ++V+LP+IISK PLAPA+  GD +W++I  WT  A++TAEE GIT  N+++    
Sbjct: 206 LANPEKYVVLPEIISKEPLAPAVRHGDDQWFDIAKWTRNALLTAEEKGITMANVDEAKAK 265

Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327
           +T+P+V+R L ++    + + L L K   Y  I+ +GNYGE+F+RN+G ++ LKI RG N
Sbjct: 266 STDPEVKRLLSVE--GKMCDNLKLEKGCFYNAIKQVGNYGEIFERNVGVKTPLKIQRGLN 323

Query: 328 ALWSKGGLMYAPPIR 342
           ALW++GGL Y+PP R
Sbjct: 324 ALWTQGGLQYSPPFR 338


>gi|15641374|ref|NP_231006.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587999|ref|ZP_01677751.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121728530|ref|ZP_01681553.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|153212726|ref|ZP_01948383.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
 gi|153819348|ref|ZP_01972015.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|153821335|ref|ZP_01974002.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|153825294|ref|ZP_01977961.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
 gi|153828770|ref|ZP_01981437.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|183179360|ref|ZP_02957571.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|227081533|ref|YP_002810084.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|229505057|ref|ZP_04394567.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229511273|ref|ZP_04400752.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229515734|ref|ZP_04405193.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
 gi|229518391|ref|ZP_04407835.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229521468|ref|ZP_04410887.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
 gi|229529562|ref|ZP_04418952.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
 gi|229608061|ref|YP_002878709.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254225346|ref|ZP_04918958.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
 gi|254286186|ref|ZP_04961146.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|254848484|ref|ZP_05237834.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745749|ref|ZP_05419697.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262158973|ref|ZP_06030085.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|262192389|ref|ZP_06050542.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
 gi|297578947|ref|ZP_06940875.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|298498554|ref|ZP_07008361.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9655856|gb|AAF94520.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121547740|gb|EAX57831.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121629194|gb|EAX61634.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|124116376|gb|EAY35196.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
 gi|125622187|gb|EAZ50509.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
 gi|126510093|gb|EAZ72687.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|126521153|gb|EAZ78376.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|148875723|gb|EDL73858.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|149741122|gb|EDM55181.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
 gi|150423855|gb|EDN15796.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|183012771|gb|EDT88071.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|227009421|gb|ACP05633.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|229333336|gb|EEN98822.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
 gi|229341566|gb|EEO06569.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
 gi|229345106|gb|EEO10080.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229347503|gb|EEO12463.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
 gi|229351238|gb|EEO16179.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229357280|gb|EEO22197.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229370716|gb|ACQ61139.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254844189|gb|EET22603.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255736824|gb|EET92221.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262029158|gb|EEY47810.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|262031742|gb|EEY50327.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
 gi|297536541|gb|EFH75374.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297542887|gb|EFH78937.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327484032|gb|AEA78439.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Vibrio cholerae LMA3894-4]
          Length = 342

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 163/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A G+W+G DV++C+A+++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G+ S  +L+
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  DW+Y+I++ +GNYGE FDR +G+ S LKI R
Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|154253424|ref|YP_001414248.1| extracellular solute-binding protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154157374|gb|ABS64591.1| extracellular solute-binding protein family 3 [Parvibaculum
           lavamentivorans DS-1]
          Length = 367

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 156/321 (48%), Positives = 215/321 (66%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                L  +++RGF++CG++ GL GF+     G W G DVDFCRA+++AIF +P ++++ 
Sbjct: 50  AAGDTLRRVRQRGFIQCGVSQGLPGFSNPDERGRWSGIDVDFCRAIAAAIFGNPDQVRFR 109

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL+AK+RF ALQS +IDILSRNT WT+ R+  LG  F  +TY+DGQ F++ K  GI + +
Sbjct: 110 PLSAKDRFTALQSGEIDILSRNTTWTMSRDTQLGFNFVGVTYYDGQSFMVRKAAGIKTTA 169

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+GA+IC + GTTTEL LADYF++  + Y  + FE+ +E   AY   RCDAYT D S L
Sbjct: 170 DLAGATICTETGTTTELNLADYFRSRGLSYRVLSFEKNDEAIVAYDRGRCDAYTTDASGL 229

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           YA +L    P  + IL +IISK PL PA+ QGD +W +I  WT  A++ AEE GIT  NI
Sbjct: 230 YATRLKLADPDANTILSEIISKEPLGPAVRQGDPQWEDIARWTLNALLEAEEFGITSANI 289

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           N++ + + NP V+R LG +     G ++GL  +W    IR +GNYGEMF+RN+G  + L 
Sbjct: 290 NEMLE-SDNPRVKRLLGRE--GAYGGSVGLDANWAANAIRAVGNYGEMFERNVGKNTPLG 346

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG NA W+ GGL YAPP+R
Sbjct: 347 IERGLNAQWTDGGLQYAPPVR 367


>gi|258621541|ref|ZP_05716574.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
 gi|258627556|ref|ZP_05722333.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
 gi|262171608|ref|ZP_06039286.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
 gi|258580138|gb|EEW05110.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
 gi|258586159|gb|EEW10875.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
 gi|261892684|gb|EEY38670.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
          Length = 342

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 164/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A GDW+G DV++C+AL++A+  D +K++++PL 
Sbjct: 28  STLDKVLAQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  GI S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGIKSAKELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   MKY P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   ++LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSALVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  DW+Y+I++ +GNYGE F+R +G+ S L+I R
Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFERTVGSGSPLQIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|171058819|ref|YP_001791168.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6]
 gi|170776264|gb|ACB34403.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii
           SP-6]
          Length = 339

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 144/320 (45%), Positives = 219/320 (68%), Gaps = 3/320 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK+R  +  G++TG+ GF+   + G W G DVD  RA+++A+  D  K++++PL
Sbjct: 22  GKTLDTIKQRDQILVGVSTGVAGFSAADSQGKWTGLDVDVGRAIAAAVLGDADKVKWVPL 81

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            + +RF A+QS ++D+LSRNT +TL R+ SLGL    + ++DGQGF++  K  + S  QL
Sbjct: 82  ASPQRFTAIQSGEVDVLSRNTTFTLTRDASLGLHQTAVVFYDGQGFMVPAKTKVKSAKQL 141

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA++CVQ+GTTTE  L D+ +A+ +   P+VF++++  +AAY + RC AYT D S L +
Sbjct: 142 KGATVCVQSGTTTEKNLTDFSRANKLNLKPVVFDKLDAANAAYFSGRCQAYTTDASGLAS 201

Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           ++      P +HVILP++ISK PL P + +GD EW+ IV W  Y ++ AEE GITQ N++
Sbjct: 202 IRSKEAKDPKDHVILPELISKEPLGPLVRRGDDEWFAIVKWVVYGLIEAEESGITQANVD 261

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           Q+  D+T+P VQR LG  K+ + G+ LGL ++W  R I+ +GNYGE+++RN+G ++ + +
Sbjct: 262 QLKADSTDPVVQRLLG--KTEDTGKLLGLDREWLARAIKAVGNYGEIYERNVGEKTPVGL 319

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG NALW+ GGL YA PIR
Sbjct: 320 PRGKNALWTNGGLQYAMPIR 339


>gi|84515667|ref|ZP_01003028.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Loktanella
           vestfoldensis SKA53]
 gi|84510109|gb|EAQ06565.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Loktanella
           vestfoldensis SKA53]
          Length = 339

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 220/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L  T+   +A+ L D+K RG LKCG N GL GFA   ANG+W+GFD
Sbjct: 1   MTKTVFIGALAVAGL--TAGIASAATLDDVKARGSLKCGSNEGLAGFAAPDANGNWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D   ++++PL ++ RF AL + ++D+L RN+ WT  R+  L L F  
Sbjct: 59  VSLCRAIAAAVLGDGQAVEFVPLTSQTRFTALAAGEVDVLVRNSTWTFTRDTDLALDFPA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ +  G+SS ++L GA++C+Q GTTTEL LADYF+A+ + Y P+      
Sbjct: 119 INYYDGQGFMVPRALGVSSAAELDGATVCIQTGTTTELNLADYFRANGISYEPVPVATNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT DIS L A + T + P +HVILP+++SK PL PA+  GD  W +I
Sbjct: 179 EGQQQYLAGACDVYTTDISGLAATRATFEAPGDHVILPEVVSKEPLGPAVRHGDNAWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT +A+V AEE G+T+ N+ +++   T+ P+V R LG +    +G  +GL  DW  ++
Sbjct: 239 VRWTTHALVAAEEYGVTKANVAELAAAPTDNPEVNRLLGTE--GELGAMIGLDADWAVKV 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +   GNYGE+F+ N+G  + + + RG NA W+ GGLMY  P R
Sbjct: 297 LSVAGNYGEIFEANIGESTAVGLARGLNAQWTDGGLMYGGPFR 339


>gi|298491367|ref|YP_003721544.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
           0708]
 gi|298233285|gb|ADI64421.1| extracellular solute-binding protein family 3 ['Nostoc azollae'
           0708]
          Length = 355

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 153/358 (42%), Positives = 224/358 (62%), Gaps = 19/358 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL----------------GDIKKRGFLKCGINTGL 44
           M K  F+     +     + S  +                     +K RG L CG++  L
Sbjct: 1   MLKSAFILASAPLFFTLAACSGESGTQVNTASAPATQVSRNIGSTVKNRGKLICGVSGEL 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
            GF+ V  +  + G DVD CRA+++A+FD+P  +++  LN KERF ALQ+ +ID+LSRNT
Sbjct: 61  PGFSFVGTDAKYSGIDVDVCRAVTAALFDNPDAVEFRNLNTKERFTALQTGEIDLLSRNT 120

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
            WT+ RE S+GL F P+ ++DGQ  ++ K  GI S++ L   +IC Q GTTTE  LAD  
Sbjct: 121 TWTMSRETSVGLQFAPVIFYDGQAIMVSKNSGIKSLADLKNKAICTQTGTTTEQNLADQM 180

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           +  ++ Y P+VFE V    A Y   RCD  T D SAL + + T  +P +++IL +++S  
Sbjct: 181 RKRSITYKPVVFEDVNITFATYAEGRCDGVTTDRSALISRRTTLPKPEDNIILDELLSSE 240

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284
           PLAPA+ +GD +W +IV W  Y++V AEELGI  +NI Q+  ++ +PD++RFLG +   N
Sbjct: 241 PLAPAVAKGDPQWNDIVKWVVYSLVKAEELGINSQNIAQL-TNSNDPDIKRFLGTE--GN 297

Query: 285 IGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GE LGLT D+  RI++H+GNYGE++DRNLG +++L +PRG N L  KGGL+Y+PP R
Sbjct: 298 LGEGLGLTNDFAARIVKHVGNYGEVYDRNLGGKTKLNLPRGQNQLAIKGGLLYSPPFR 355


>gi|219847287|ref|YP_002461720.1| extracellular solute-binding protein family 3 protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541546|gb|ACL23284.1| extracellular solute-binding protein family 3 [Chloroflexus
           aggregans DSM 9485]
          Length = 389

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 149/328 (45%), Positives = 220/328 (67%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+   +  ++  I  RG L CG+N   L GFA V A+G + GFD+DFCRA+++A+FDD
Sbjct: 65  GTTNQPASGGLIQQILARGRLICGVNNNPLPGFASVDASGVYSGFDIDFCRAVAAALFDD 124

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+ + PL+A+ERF ALQ+ +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K 
Sbjct: 125 PTKVDFRPLSAQERFTALQTGEIDVLIRNSTWTLGRDGNLGLDWAPTTFYDGQGMMVRKD 184

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            GI+++  + GA+ICVQ GTTTEL LAD F+A  + + P+VF   +   AAY A +CD +
Sbjct: 185 SGINTLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDSTRAAYDAGQCDGF 244

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D S L +       P++H IL   +SK PL PA+ QGD +W++ V W  +A   AEE 
Sbjct: 245 TTDKSGLISSLTLLSNPADHKILEVTMSKEPLGPAVKQGDPQWFDAVRWIVFATFQAEEY 304

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           GIT +N+N    ++  P+++RFLGI+   ++   +GL  D+  RIIRH+GNY E+++RNL
Sbjct: 305 GITSQNVNDFL-NSDVPEIRRFLGIE--GDLAAGIGLPNDFAVRIIRHVGNYAEIYNRNL 361

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +   +PRG NAL++ GGL+Y+PP R
Sbjct: 362 GPDTPFNLPRGLNALYTDGGLLYSPPFR 389


>gi|309791172|ref|ZP_07685704.1| extracellular solute-binding protein family 3 [Oscillochloris
           trichoides DG6]
 gi|308226734|gb|EFO80430.1| extracellular solute-binding protein family 3 [Oscillochloris
           trichoides DG6]
          Length = 380

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 147/319 (46%), Positives = 220/319 (68%), Gaps = 3/319 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              +  I  RG L CG+N+ L GF  V + G++ GFDV+FCRA+++A+FDDP+K+++ PL
Sbjct: 65  GGRIQTIISRGNLICGVNSVLPGFGNVDSTGNFSGFDVEFCRAIAAALFDDPTKVEFRPL 124

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           NA+ERF ALQS ++D+LSRNT  TL R+ S+GL F P+T++DGQG ++ K  GI S+  +
Sbjct: 125 NAQERFTALQSGEVDVLSRNTTATLTRDGSVGLDFAPVTFYDGQGMMVRKDSGIESLEDM 184

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA ICVQ+GTTTEL LAD F++ N+ +  ++F+  +    AY + +CD +T D S L +
Sbjct: 185 EGARICVQSGTTTELNLADQFRSRNINFEAVIFQEADPTFQAYDSGQCDGFTTDKSGLVS 244

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P +H+IL   +SK PLAPA++QGD +W + V W  YA + AEELGIT  NI  
Sbjct: 245 YQTKATNPDDHMILDVTMSKEPLAPAVLQGDAQWADAVRWVVYATIEAEELGITSANIGD 304

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
            +  T +P+++RFLG++    +G  +GL  D+  R+I+H+GNY E+++RNLG  +   +P
Sbjct: 305 FAA-TEDPNIRRFLGVE--GELGAGIGLPNDFAARVIKHVGNYQEIYNRNLGPDTPFNLP 361

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG N L+++GGL+Y+PP R
Sbjct: 362 RGLNTLYTEGGLLYSPPFR 380


>gi|119946447|ref|YP_944127.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
 gi|119865051|gb|ABM04528.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 337

 Score =  337 bits (864), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 164/321 (51%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +AS L ++ K+G + CGI+TG+ GF+   + G W+G DVDFC+++++A+F D SK++Y+
Sbjct: 20  ASASTLEEVVKKGDINCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL AKERF ALQS +ID+LSR T WT  R+ SLGL F  + Y+DGQGF+++KK GISS  
Sbjct: 80  PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKLGISSAK 139

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +LSGA+ C+QAGTT+EL L DYF+++NM+Y  + ++   +    +++ RCD  T D S L
Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQSNNMEYRAVTYDTSGQTVNGFKSGRCDVITSDASQL 199

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           Y LKL  D P   ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++  N+
Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           + + K + NP + R LG  KS   GE LGL  DW Y+I++ +GNYGEMFD+N+G  S L 
Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG N LW++GGLMY+ PIR
Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337


>gi|261210913|ref|ZP_05925203.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
 gi|260839888|gb|EEX66488.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
          Length = 342

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 165/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A GDW+G DV++C+AL++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G+ S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   MKY P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  WT YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWTLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  DW+Y+I++ +GNYGE F+R +G  S L+I R
Sbjct: 268 MK-SENPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFERTVGKGSPLQIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|218246879|ref|YP_002372250.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           8801]
 gi|257059921|ref|YP_003137809.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
 gi|218167357|gb|ACK66094.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8801]
 gi|256590087|gb|ACV00974.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
          Length = 363

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 145/326 (44%), Positives = 216/326 (66%), Gaps = 6/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +S   + S L  IK+RG L CG+N  + GF+ V   G + G DVD CRA+++A+FDDPSK
Sbjct: 43  SSSKVSGSRLATIKERGTLICGVNGEVPGFSFVDEQGQYSGLDVDMCRAIAAALFDDPSK 102

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y  L+A+ER  A+QS ++D+L+RNT WT+ R+ ++G+ F P  ++DGQG +  K  G 
Sbjct: 103 VEYRKLSAQERLTAVQSGEVDVLNRNTTWTMSRDTAVGMEFAPTVFYDGQGIMATKASGA 162

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +++  L+G SICV AGTTTE  LAD  +      Y+P+V + V+ + AAY+  RC+A T 
Sbjct: 163 NTLKDLTGKSICVLAGTTTEQNLADQMRKEGVTDYNPVVSDDVDALYAAYQEGRCEAVTS 222

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A +    +  +HVIL  ++SK PL P +  GD+ WY+ V W  +A++ AEE GI
Sbjct: 223 DRSQLVARRSIFPKKDDHVILDVVMSKEPLGPVVADGDSTWYDAVKWITFAVIQAEEFGI 282

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T +N+    + T +P+++RFLGID    +GE +GL  D+  RII+H+GNYGE+++RN+G 
Sbjct: 283 TSQNLATF-ESTEDPNIKRFLGIDD--KLGEDMGLPNDFAARIIKHVGNYGEIYERNIGK 339

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
              L + RG N LW+ GGL+Y+PP R
Sbjct: 340 --PLGLERGQNQLWTNGGLLYSPPFR 363


>gi|33594953|ref|NP_882596.1| amino acid-binding periplasmic protein [Bordetella parapertussis
           12822]
 gi|33565029|emb|CAE39978.1| amino acid-binding periplasmic protein [Bordetella parapertussis]
          Length = 338

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 216/324 (66%), Gaps = 4/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                + L  +KKRG + CG  TG  GF+     G W+G DVD CRA+++A+F D SKI+
Sbjct: 18  AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S
Sbjct: 78  VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E   E+  A+ + RCD ++ D S
Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197

Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
            L +++    ++P ++V+LP+IISK PL P + QGD  W NIV W+  AM+ AEE G+T 
Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N+++  K + NP+V+R LG+  +   G  LGL + W Y II+ +GNYGE F+RN+G  S
Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG NA W +GGLMYA PIR
Sbjct: 315 PLKIQRGLNAQWIQGGLMYALPIR 338


>gi|148980390|ref|ZP_01816033.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
 gi|145961262|gb|EDK26574.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
          Length = 342

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 159/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GFL CG++TGL GF+   + G+W+G DV++C+AL++A+  D +K++Y+PL 
Sbjct: 28  STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G++S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKDLGLTSALELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L    P    +LP+IISK PL P + Q D +W+N+  WT  AMV AEE GI+ KN +++
Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMVNAEEYGISSKNADEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + +P+++R LG+D     G+ LG+  DW Y++I+ +GNYGE F+R +G  S L+I R
Sbjct: 268 LK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|153011796|ref|YP_001373009.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563684|gb|ABS17180.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 335

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 153/318 (48%), Positives = 224/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             +  IK+RG ++CG++ G++GF+    NG W GFDVDFCRA+++A   +P K+ Y+PL+
Sbjct: 21  GTVDVIKERGEVRCGVSQGVLGFSVPDKNGVWGGFDVDFCRAVAAATLGNPDKVAYVPLS 80

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
            K+RF ALQS ++D+LSR T WTL R+  LG++F  + Y+DGQ F+++K+ G+ SV ++S
Sbjct: 81  TKDRFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQAFMVNKEVGVKSVKEIS 140

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+C + GTTTE  +ADYF A+ ++Y  I FE+ ++   A+   RCD Y+ D SALYA 
Sbjct: 141 GASVCTETGTTTEQNMADYFSANKIEYQVIAFEKPDQTIQAFNTGRCDVYSTDASALYAQ 200

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +LT + P   V+LP++ISK PL PA+ QGD +W+ IV WT +A++ AEE+GIT++N   +
Sbjct: 201 RLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKIVRWTLFALIEAEEMGITKENAASL 260

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            + +     +RFLG++  +  G+A+GL   W Y+ I  +GNYGE+F+R+LG  S LKI R
Sbjct: 261 LE-SGTVAQKRFLGVESEA--GKAMGLDAKWAYQAISAVGNYGEIFERHLGKDSPLKIDR 317

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LWS GGLMYAPP R
Sbjct: 318 GLNRLWSDGGLMYAPPAR 335


>gi|260432480|ref|ZP_05786451.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416308|gb|EEX09567.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter lacuscaerulensis ITI-1157]
          Length = 356

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    I    + +  A  + D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 19  MKKSVI--LGAATIAGLAAGAAAAGTVDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 76

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S ++D+L+RNT WT  R++ L   F  
Sbjct: 77  VAVCRAVAAAVLGDANAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFDFVG 136

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 137 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 196

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 197 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWGDV 256

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELGIT  NI++++  T NP++ R LG +    +GE LGL   W  R I
Sbjct: 257 VRWTLNALITAEELGITSANIDEMASGTENPEINRLLGSE--GTLGEMLGLDAQWALRAI 314

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R
Sbjct: 315 KAGGNYGEVFAKNIGEETPIGLARGLNAQWTDGGLLYSPPFR 356


>gi|167041376|gb|ABZ06129.1| putative bacterial extracellular solute-binding protein, family 3
           [uncultured marine microorganism HF4000_005K23]
          Length = 348

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 217/350 (62%), Gaps = 12/350 (3%)

Query: 1   MYKDF--FVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M + F   +S++ ++ + F        +  +  L +  K+  LKCG++ GL GF+ + A 
Sbjct: 3   MKRTFKHLLSLIAVVAVLFALGTEAMAAKKSKTLKNTIKKDTLKCGVSQGLPGFSNMDAA 62

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D  K+ ++ L+AKERF AL + +IDILSRNT WTL R+  
Sbjct: 63  GNWTGVDVDVCRAVAAAVLGDSGKVTFIALSAKERFTALIAGEIDILSRNTTWTLSRDAD 122

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  GI+S +    G S CV  GTTTEL + D+F +  + Y 
Sbjct: 123 IGLTFVGVNFYDGQGFMVRKDSGITSTNDFKSGLSACVNIGTTTELNMRDFFTSKGITYE 182

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+VFE+ +E+  AY A RCD YT D S L A +     P +H++LP+ ISK PL P + Q
Sbjct: 183 PVVFEKADEVKDAYDAGRCDTYTTDKSGLAAQRTKLANPDDHIVLPETISKEPLGPVVRQ 242

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD  W +IV W+   M+ AEE GI   N + + K + NP ++R +G +    +G ALGL 
Sbjct: 243 GDAVWEDIVRWSLNVMIEAEEYGINSANADSM-KTSKNPQIKRLVGAE--GELGAALGLD 299

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N LW+KGGL+Y PP R
Sbjct: 300 NDWSLRIIKQVGNYGESYKRNI-ADTGILPTRGPNELWTKGGLLYVPPAR 348


>gi|84394265|ref|ZP_00992991.1| ABC-type amino acid transport, signal transduction system,
           periplasmic component/domain [Vibrio splendidus 12B01]
 gi|86148624|ref|ZP_01066906.1| ABC-type amino acid transport, signal transduction
           systems,periplasmic component/domain [Vibrio sp. MED222]
 gi|218709394|ref|YP_002417015.1| amino acid ABC transporter [Vibrio splendidus LGP32]
 gi|84375104|gb|EAP92025.1| ABC-type amino acid transport, signal transduction system,
           periplasmic component/domain [Vibrio splendidus 12B01]
 gi|85833580|gb|EAQ51756.1| ABC-type amino acid transport, signal transduction
           systems,periplasmic component/domain [Vibrio sp. MED222]
 gi|218322413|emb|CAV18566.1| Amino acid ABC transporter [Vibrio splendidus LGP32]
          Length = 342

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 158/318 (49%), Positives = 223/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GFL CG++TGL GF+   + G+W+G DV++C+AL++A+  D +K++Y+PL 
Sbjct: 28  STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K+ G++S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L    P    +LP+IISK PL P + Q D +W+N+  WT  AM+ AEE GI+ KN +++
Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMINAEEYGISSKNADEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + +P+++R LG+D     G+ LG+  DW Y++I+ +GNYGE F+R +G  S L+I R
Sbjct: 268 LK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQISR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|304391889|ref|ZP_07373831.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp.
           R2A130]
 gi|303296118|gb|EFL90476.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp.
           R2A130]
          Length = 342

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 217/343 (63%), Gaps = 2/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L    +  T    +A+ L D+K +GFL+CG++TG  GFA     G+W+GFD
Sbjct: 1   MKTKLLSLALGAAAIAMTGTVASAATLDDVKAKGFLQCGVSTGFPGFAFTDDAGNWQGFD 60

Query: 61  VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
              CRA+++AIF  D + +++ P   K RF AL S ++D+L+RNT  T  R++ L   F 
Sbjct: 61  PALCRAMAAAIFAGDSNAVKFTPTTGKTRFTALASGEVDVLARNTTETFSRDVDLKFTFG 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P+ Y+DGQGF++ K  G++S   LSGA+ICVQ GTTTEL LADYF+A+NM Y P+  E  
Sbjct: 121 PVNYYDGQGFMVRKSLGVTSALNLSGATICVQTGTTTELNLADYFRANNMTYEPVPIETN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E    Y A+ CDAYT D S L A +   + P++H+ILP+IISK PL P + QGD +W +
Sbjct: 181 AEAQEKYLANACDAYTTDASGLSATRSAFEAPNDHMILPEIISKEPLGPLVRQGDDQWAD 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           I+ WT  A++TAEE G+T  N +++   +T+PD+QR LG  +    G  LGL  DW    
Sbjct: 241 ILKWTLLALITAEEKGVTAANADEMKASSTDPDIQRLLGATEDG-FGAMLGLDNDWALNA 299

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE+F + LG  + + I RG NAL++ GGLMYA PIR
Sbjct: 300 IKAGGNYGEIFAKYLGTDTAVGIERGLNALYTDGGLMYAAPIR 342


>gi|313680184|ref|YP_004057923.1| amino acid ABC transporter substrate-binding protein, paat family
           [Oceanithermus profundus DSM 14977]
 gi|313152899|gb|ADR36750.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 339

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 147/324 (45%), Positives = 210/324 (64%), Gaps = 6/324 (1%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80
              S L  +K+RG L CG+N G  GF  +    GD+ GFDVDFCRA+++AIFDDP+K+ +
Sbjct: 19  AQQSRLDVVKQRGKLICGVNGGAPGFGFIDEKTGDYVGFDVDFCRAVAAAIFDDPTKVDF 78

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PLNAK RF A+Q+ ++D++ RNT  T  R+  LG+ F P+ ++DGQG ++ K  G+ SV
Sbjct: 79  VPLNAKVRFNAIQTGKVDVVFRNTTVTTSRDSQLGVDFLPVNFYDGQGVMVKKSLGVKSV 138

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L GA++C  AGTTTE    D  +AHN+    + F+   +  A   + RCDA T D S 
Sbjct: 139 YDLKGATVCTNAGTTTEKNWTDVDRAHNLGTKLLTFDDFSKSMAGLESGRCDAVTTDKSG 198

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   K  +  P   VILP+ +SK PLA    Q D++W + ++W  YA + AEE GITQ N
Sbjct: 199 LVGWKAKSKDPESLVILPETLSKEPLAGFTFQNDSKWRDALTWIVYATMQAEEFGITQAN 258

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           ++Q+ K ++NP ++RFLG++    +GE LGLT D+  R+IRH+GNYGE++ R+LG  S  
Sbjct: 259 LDQMLK-SSNPGIRRFLGVES--KLGEGLGLTNDFAARVIRHVGNYGEIYARHLGPDSPF 315

Query: 321 KIPR--GYNALWSKGGLMYAPPIR 342
            IPR    NAL++ GGL+Y+PP R
Sbjct: 316 FIPREGSLNALYTDGGLIYSPPFR 339


>gi|222102263|ref|YP_002546853.1| polar amino acid ABC transport substrate-binding protein, aapJ-2
           [Agrobacterium radiobacter K84]
 gi|221728380|gb|ACM31389.1| polar amino acid ABC transport substrate-binding protein, aapJ-2
           [Agrobacterium radiobacter K84]
          Length = 347

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 135/327 (41%), Positives = 203/327 (62%), Gaps = 4/327 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + +   S L  IK+RG +K G+     GF    ++G W+GF VDF RAL+  IF++P
Sbjct: 25  LLPNMANAGSTLDKIKERGVIKVGV-GTTPGFFTPDSSGRWQGFFVDFGRALAVTIFNNP 83

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+++   + ++R  ALQ+ + DIL      T+ R   LG  F P+ ++DGQG ++ K  
Sbjct: 84  DKVEFTNSSPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDL 143

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G++  + L GA+I +Q+GTT EL +AD+F+    K+ P+  E   E   A  + R DA T
Sbjct: 144 GVTKGADLDGATIGIQSGTTGELNIADFFRKTGKKFTPVTIEETAEFTKALDSGRVDALT 203

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D + L A +    +P ++V+LP+ +SK PLAPAI  GD +W  IV+WT YA + AEE G
Sbjct: 204 QDSTDLAAKRTQLKKPDDYVLLPERLSKEPLAPAIRAGDDQWLEIVNWTIYATIQAEEFG 263

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           IT+ N++   K + +P +QRFLG+D S  +G+A+GL   + Y II+ +GNYGE+F+RN+G
Sbjct: 264 ITKDNVDTFLK-SDDPAIQRFLGVDPS--LGQAIGLDPKFAYNIIKAVGNYGEIFERNVG 320

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
             + L   RG N LW+KGGL+Y+PP R
Sbjct: 321 KGTPLNFDRGLNQLWTKGGLIYSPPFR 347


>gi|323139262|ref|ZP_08074316.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
 gi|322395483|gb|EFX98030.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
          Length = 343

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 156/344 (45%), Positives = 239/344 (69%), Gaps = 5/344 (1%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M++    + L L+I  F   +  + AS L  +K+ G L CG++ G+VGF+     G+W G
Sbjct: 3   MFQKRVRASLSLLIASFCLLAAPSQASTLDSVKQSGALACGVSNGIVGFSIADDKGNWSG 62

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVDFCRA++SAIF D SK++++P+  +ERF AL+S + D+LSRN+ W    E+  GL F
Sbjct: 63  FDVDFCRAVASAIFGDASKLRFVPVGTEERFEALKSGKFDLLSRNSTWAFSNEVDQGLIF 122

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +T++DGQGF++ K + I+S  +L+G+ +CV++ TTTE  +AD+FK ++M + P+ FE 
Sbjct: 123 AGVTFYDGQGFLVPKSRKIASALELNGSKVCVKSATTTEANVADFFKQNHMSFEPVRFET 182

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI  AY A +C+A + DIS L+A+KL   +P++++IL D+ISK PL P + QGD +W 
Sbjct: 183 LAEIIKAYDAGQCNAISSDISQLHAIKLELKKPADNLILADVISKEPLGPVVRQGDDQWL 242

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N+V W  +AM+ AEELG++  NI Q +K +  P V+RF+G +   +IG+ LGL+ DW   
Sbjct: 243 NLVKWVIFAMLNAEELGVSSSNIEQ-AKKSQKPAVRRFIGAE--GDIGKQLGLSPDWALN 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++++GNYGE+ +RN+G +S+L I RG N LWS GG+ YAPP+R
Sbjct: 300 IVKNVGNYGEVLERNVGKKSKLGIARGLNQLWSMGGVQYAPPLR 343


>gi|59712139|ref|YP_204915.1| general L-amino acid-binding protein [Vibrio fischeri ES114]
 gi|59480240|gb|AAW86027.1| general L-amino acid-binding protein [Vibrio fischeri ES114]
          Length = 342

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 162/345 (46%), Positives = 231/345 (66%), Gaps = 6/345 (1%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       F +I     L        +  L  ++K G+L+CG++TGL GF+   + G+W+
Sbjct: 1   MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL 
Sbjct: 61  GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K+ G++S  +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+
Sbjct: 121 FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + A RCD  T D S LYAL+L    P    +LP+IISK PL P + QGD +W
Sbjct: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  W    M+ AEE GI+ KN +Q+ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 241 FNINKWVLNTMINAEEYGISSKNADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++++ +GNYGE F+R +G  S L+I RG NALW+ GG +YA PIR
Sbjct: 298 QVVKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFVYAAPIR 342


>gi|323698172|ref|ZP_08110084.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323458104|gb|EGB13969.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 337

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 144/342 (42%), Positives = 222/342 (64%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       I  +I L   + S  A  L  +++ G L  G++ G+ GF+   +NG W GFD
Sbjct: 1   MK--TLSKIFMVIALLAMAGSALAGTLEKVQQNGELVLGVSEGVAGFSAPDSNGKWAGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+++A+  +P  I+Y+PL +K++ +A+ S Q+D LSR T WT+ R+   G+ F  
Sbjct: 59  VDMGKAVAAAVLKNPDAIKYVPLASKQKIVAVSSGQVD-LSRGTTWTMKRDCKQGVDFTV 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQG ++ K  G++  ++L GAS+ V +GTT+EL +AD+ +A+N+K   +VFE  +
Sbjct: 118 VLFYDGQGLMVKKGLGVTKATELDGASVAVVSGTTSELNVADFARANNIKLETVVFESKK 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY A R DA+T D+S L +L+     P EH+ILP++ SK PL+P +  GD +W ++
Sbjct: 178 EAFNAYVAGRADAFTTDVSQLASLRAGTTNPDEHIILPEVFSKEPLSPFVRHGDQQWKDL 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  + ++ AEE GITQ N+ ++   +T+P VQR LG   + ++G  + L  DW  R I
Sbjct: 238 VTWVLFGLIEAEEKGITQANVLEMKAKSTDPVVQRMLGA--TGDVGALIDLDNDWLVRAI 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEM+DRN G +S LKIPRG+N LW+KGGL+YA PIR
Sbjct: 296 QAVGNYGEMYDRNFGPKSALKIPRGHNNLWTKGGLIYAMPIR 337


>gi|126728211|ref|ZP_01744027.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sagittula
           stellata E-37]
 gi|126711176|gb|EBA10226.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sagittula
           stellata E-37]
          Length = 336

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 144/343 (41%), Positives = 211/343 (61%), Gaps = 8/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MY+     I+   +    + +  A  L ++K RG L CG+NTGLVGFA   +NG+W+GFD
Sbjct: 1   MYR-----IIGAGLAMLLAGAATAGTLDEVKSRGTLNCGVNTGLVGFASKDSNGEWRGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  + ++   A  RF AL + +ID+L RNT W+   +I L + F  
Sbjct: 56  VGLCRAVAAAVLGDPMAVNFVETTAATRFTALNAGEIDLLVRNTTWSFSTDIDLKVDFAG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQ F++ K  G+SS  +L G SICVQAGTT+ L + +YF  + M Y  +  E   
Sbjct: 116 INYYDGQAFMVPKTLGLSSARELDGRSICVQAGTTSALNVDEYFDRYQMSYEAVPVEGTA 175

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y    C+ Y+ D S L A++ T   P +HV+L DIISK PL PA+  GD +W +I
Sbjct: 176 EAQTLYLEGACEVYSSDASQLAAIRATFGNPGDHVLLEDIISKEPLGPAVRHGDNDWADI 235

Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A++ AEELG+   N++++    T+ P+++R LG++    +GE LGL  DW  R 
Sbjct: 236 VRWTLNALIAAEELGVNSANVDELKAQGTSTPEIKRLLGLE--GRMGEMLGLDSDWAVRA 293

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE+F RN+G  + + + RG N  W++GGL+Y+PP R
Sbjct: 294 IKAGGNYGELFSRNIGVDTPIGLSRGLNLQWTEGGLLYSPPFR 336


>gi|209966385|ref|YP_002299300.1| general L-amino acid-binding periplasmic protein AapJ
           [Rhodospirillum centenum SW]
 gi|209959851|gb|ACJ00488.1| general L-amino acid-binding periplasmic protein AapJ
           [Rhodospirillum centenum SW]
          Length = 353

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 158/321 (49%), Positives = 222/321 (69%), Gaps = 5/321 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S L  IK+RG L+CG+NTGL GF+   + G W G DVD C+A+++A   D  K+ Y P
Sbjct: 37  QQSTLDQIKQRGVLRCGVNTGLAGFSTPDSQGRWTGLDVDVCKAIAAAALGDAGKVHYAP 96

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A++R  ALQS ++DILSRNT W+L R+   G+ F P+ Y+DGQGF++ K  G++S  Q
Sbjct: 97  LSAQQRLTALQSGEVDILSRNTTWSLSRDT-QGMNFGPVVYYDGQGFMVPKALGVTSAKQ 155

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-AL 201
           L GA++CVQ GTTTEL LADYF A+ M + P+V E  +E+ AA+ + RCD +T D S   
Sbjct: 156 LDGATVCVQTGTTTELNLADYFAANRMSFKPVVIESFDEVVAAFFSGRCDVFTTDGSQLA 215

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
               ++   P ++VILP+IISK PLAP +  GD +W++IV WT YA++ AEE GIT  N+
Sbjct: 216 SVRAVSAAAPDDYVILPEIISKEPLAPVVRHGDDQWFDIVKWTVYALLEAEEKGITAANV 275

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           ++  K + +P VQR LG+     +G++LGL   W YR I+ +GNYGE+F+RN+G  + L+
Sbjct: 276 DEKKK-SADPTVQRLLGVQP--GMGQSLGLDDAWAYRAIKAVGNYGEVFERNVGKATPLR 332

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG NALW+ GGLMYAPP+R
Sbjct: 333 LERGLNALWTNGGLMYAPPVR 353


>gi|126724899|ref|ZP_01740742.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2150]
 gi|126706063|gb|EBA05153.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2150]
          Length = 338

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S   L I   ++ +  A  L D+K RG L CG+ TGLVGFA   A+G W+GFD
Sbjct: 1   MKKSVIFS--ALTIAGLSASAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNADGRWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA++ A   D + ++++P   K RF AL S +ID+L+RNT WTL R+  L   F  
Sbjct: 59  VAVCRAVAVATLGDENAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K  G++S   L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMAPKDLGVASAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD +T D S L A + T + P++HV+LP+I+SK PL P +  GD+EW +I
Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPADHVLLPEIVSKEPLGPLVRHGDSEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  AM+TAEELGIT  N  ++S  T NP++ R LG +    +GE LGL+ DW   II
Sbjct: 239 VRWSLNAMITAEELGITSANAAEMSAGTNNPEINRLLGSE--GTLGEMLGLSADWAKNII 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F+ N+G  + + + RG N+ W+ GGL+Y+PP R
Sbjct: 297 MTQGNYGEVFENNIGENTAIGLSRGLNSQWTDGGLIYSPPFR 338


>gi|254456453|ref|ZP_05069882.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083455|gb|EDZ60881.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
          Length = 346

 Score =  335 bits (859), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 151/350 (43%), Positives = 223/350 (63%), Gaps = 12/350 (3%)

Query: 1   MYKDF--FVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M+K      S++ ++ + FT       +  +  L + +K+GF++CG++ GL GF+   A 
Sbjct: 1   MFKYLKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D +K+++ PL+AKERF AL S +IDILSRNT WTL R+  
Sbjct: 61  GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSNEIDILSRNTTWTLSRDAD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  G SSV+   +G S C   GTTTEL + D+F +  + Y 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKNSGYSSVNDFKNGISACTNLGTTTELNMRDFFNSKGISYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+ FE+ +E+ AAY A RCD YT D S L A ++    P +HV+LP+ ISK PL P + Q
Sbjct: 181 PVTFEKADEVVAAYDAGRCDTYTTDKSGLAAQRIKLSSPDDHVVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD+ W +IV W+   M+ AEE G+   N + + K + NP V+R +G +    +G ALGL 
Sbjct: 241 GDSVWEDIVRWSLNVMIEAEEYGVNSANADSM-KTSDNPAVKRLVGAE--GELGAALGLD 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N LW+KGG++Y PP R
Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNELWTKGGILYVPPAR 346


>gi|254477415|ref|ZP_05090801.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria sp. R11]
 gi|214031658|gb|EEB72493.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria sp. R11]
          Length = 338

 Score =  335 bits (859), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNKVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPKDLGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D P+ HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPAGHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A++ AEELG+T  NIN+++  T NP++ R LG +    +GE LGL+ DW    +
Sbjct: 239 VRWSLNALIAAEELGVTSANINEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|254463676|ref|ZP_05077087.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium Y4I]
 gi|206684584|gb|EDZ45066.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium Y4I]
          Length = 338

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 223/342 (65%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKKTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HVILP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGSCDVYTTDASGLAATRATFDDPSGHVILPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A++ AEELGIT  NIN+++  T NP++ R LG +   N+GE LGL  DW  + +
Sbjct: 239 VRWSLMALIAAEELGITSANINEMAAGTENPEINRLLGSE--GNLGEMLGLNADWAMKAV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AAGGNYGEIFAKNIGEDTPVGLARGLNAQWTEGGLLYAPPFR 338


>gi|126659578|ref|ZP_01730709.1| extracellular solute-binding protein, family 3 [Cyanothece sp.
           CCY0110]
 gi|126619121|gb|EAZ89859.1| extracellular solute-binding protein, family 3 [Cyanothece sp.
           CCY0110]
          Length = 334

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 215/324 (66%), Gaps = 6/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            + + S L  IK+RG L CG+N  + GF+ V  NG + G DVD CRA+++A+FDDP K++
Sbjct: 16  TTASTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 75

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P  ++DGQG ++    G+++
Sbjct: 76  YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAN 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +  L+G SICV AGTTTE  LAD  +   +  Y+P+ FE V+ + AAY+  RC+  T D 
Sbjct: 136 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 195

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L A +      ++H IL  ++SK PL PA+   D+ W++ V W  ++++ AEELGI  
Sbjct: 196 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 255

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           +NI    + + +P+V+RFLG+D    +GE +GL  D+  R ++H+GNYGE+++RN+G   
Sbjct: 256 ENIETF-ETSEDPNVRRFLGLDD--KLGEGMGLPNDFAARAVKHVGNYGEVYERNIGE-- 310

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            L + RG N LW++GGL+Y+PP R
Sbjct: 311 PLGLDRGQNNLWTEGGLLYSPPFR 334


>gi|291571845|dbj|BAI94117.1| putative ABC transporter substrate-binding protein [Arthrospira
           platensis NIES-39]
          Length = 343

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 216/325 (66%), Gaps = 2/325 (0%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +  T  S L  +K RGFL CG++ G+ GF+ V  +G++ G DVD C+A+++A+FDDP+ 
Sbjct: 21  AAGGTGQSRLNVVKNRGFLICGVDGGIPGFSFVDESGEYSGLDVDVCKAVAAALFDDPNA 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +QY  L++ ERF A++S ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++    GI
Sbjct: 81  VQYRNLDSTERFEAMRSGEVDMLSRNTTWTLSRDTSVGMEFAPTTFYDGQGMMVRADSGI 140

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +++      ++CV+AGTTTEL L D  +   + +  + F++ +   AAY   RC+  T D
Sbjct: 141 TTLEDFQDLAVCVEAGTTTELNLTDNMRERGITFETVTFQQADPAYAAYAEGRCEGMTSD 200

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            S L A + T   P++H+IL   +SK PL P  +  D+ W++ V W  +A+  AEELGIT
Sbjct: 201 KSQLLARRSTLPNPNDHIILDVTMSKEPLGPVTLNNDSAWFDTVKWVTFALFEAEELGIT 260

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
           Q N+ Q+++ + NP ++RFLG++   ++G  +GLT D+  R+I+H+GNY E++DRNLG  
Sbjct: 261 QANVEQIAQTSENPTIRRFLGVE--GDLGTGMGLTNDFAARVIKHVGNYAEVYDRNLGTG 318

Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342
           S+  +PR  N LW+ GGL+++PP R
Sbjct: 319 SQFNLPRNENELWTNGGLLFSPPFR 343


>gi|229523536|ref|ZP_04412941.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
 gi|229337117|gb|EEO02134.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
          Length = 342

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 162/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A G+W+G DV++C+A+++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LG  F  + Y+DGQGF++ K  G+ S  +L+
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGRNFVGVNYYDGQGFMVKKDLGVKSAKELN 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V R LG D     G  LG+  DW+Y+I++ +GNYGE FDR +G  S LKI R
Sbjct: 268 MK-SDNPEVMRILGRDGPKGTG--LGIRDDWSYQIVKQVGNYGESFDRTVGAGSPLKIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|172037183|ref|YP_001803684.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142]
 gi|171698637|gb|ACB51618.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC
           51142]
          Length = 349

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 214/324 (66%), Gaps = 6/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  IK+RG L CG+N  + GF+ V  NG + G DVD CRA+++A+FDDP K++
Sbjct: 31  TTATTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 90

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P  ++DGQG ++    G++ 
Sbjct: 91  YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAD 150

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +  L+G SICV AGTTTE  LAD  +   +  Y+P+ FE V+ + AAY+  RC+  T D 
Sbjct: 151 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 210

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L A +      ++H IL  ++SK PL PA+   D+ W++ V W  ++++ AEELGI  
Sbjct: 211 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 270

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           +NI    + + +P+V+RFLG+D    +GE +GL  D+  R+++H+GNYGE+++RN+G   
Sbjct: 271 QNIATF-ETSEDPNVRRFLGLDD--KLGEGMGLPNDFAARVVKHVGNYGEVYERNIGE-- 325

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            L + RG N LW++GGL+Y+PP R
Sbjct: 326 PLGLDRGPNNLWTEGGLLYSPPFR 349


>gi|119946443|ref|YP_944123.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
 gi|119865047|gb|ABM04524.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 337

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 163/321 (50%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +AS L ++ K+G + CGI+TG+ GF+   + G W+G DVDFC+++++A+F D SK++Y+
Sbjct: 20  ASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL AKERF ALQS +ID+LSR T WT  R+ SLGL F  + Y+DGQGF+++KK G++S  
Sbjct: 80  PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAK 139

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +LSGA+ C+QAGTT+EL L DYF+A+NM+Y  + ++   +    +++ RCD  T D S L
Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQL 199

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           Y LKL  D P   ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++  N+
Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           + + K + NP + R LG  KS   GE LGL  DW Y+I++ +GNYGEMFD+N+G  S L 
Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG N LW++GGLMY+ PIR
Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337


>gi|297624238|ref|YP_003705672.1| family 3 extracellular solute-binding protein [Truepera
           radiovictrix DSM 17093]
 gi|297165418|gb|ADI15129.1| extracellular solute-binding protein family 3 [Truepera
           radiovictrix DSM 17093]
          Length = 339

 Score =  335 bits (858), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 220/342 (64%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  S LC++I  FT        L +++ RG L CG+N  L GF  V   G+ +GFD
Sbjct: 1   MRKWFVGSALCVLIASFTVAQAQGK-LAEVRNRGSLVCGVNDVLPGFGTVNEEGEHEGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A+++A+  D   + Y PL+A+ERF A+Q+ ++D+L RNT WT  R+  +GL F P
Sbjct: 60  VDFCKAIAAAVLGDADAVTYRPLSAQERFTAVQTGEVDVLIRNTTWTSSRDTEVGLNFGP 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ +  GI S+  L G  I VQ+GTTTEL LAD   A +++Y P++FE  +
Sbjct: 120 VIFYDGQGFMVRRDSGIESLEDLEGRRIGVQSGTTTELNLADVMSALDIQYEPVIFETSD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++ AAY     DA+T D S L +L ++   P EH IL   ISK PLAPA++ GD EWY++
Sbjct: 180 QLVAAYDDGAVDAWTTDKSGLASLLISLSDPEEHRILDATISKEPLAPAVLHGDDEWYDV 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W  + ++ AEE GIT +N+ ++++ +TNP++QR LG + S+   E +GL  D     I
Sbjct: 240 VKWVIFGLMEAEEYGITSENVRELAETSTNPNIQRILGAEPSAV--EQIGLEADAIATAI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+++RNLG  +   IPRG NA + +GGL+Y  P R
Sbjct: 298 EAVGNYGEIYERNLGEGTPFNIPRGLNAQYYEGGLIYGMPFR 339


>gi|163740274|ref|ZP_02147668.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161386132|gb|EDQ10507.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 338

 Score =  334 bits (857), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNKVILG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A+V AEELG+T  NI +++  T NP++ R LG +    +GE LGL+ DW    I
Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|163739481|ref|ZP_02146891.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Phaeobacter
           gallaeciensis BS107]
 gi|161387234|gb|EDQ11593.1| glutamate/glutamine/aspartate/asparagine-binding protein BztA
           precursor [Phaeobacter gallaeciensis BS107]
          Length = 338

 Score =  334 bits (857), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 156/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNKVILG--ALTIAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A+V AEELG+T  NI +++  T NP++ R LG +    +GE LGL+ DW    I
Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|259415913|ref|ZP_05739833.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
 gi|259347352|gb|EEW59129.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
          Length = 378

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 158/342 (46%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F     L +    + +  A  L D+K R  L CG++TGLVGF+   ANG+W+GFD
Sbjct: 41  MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 98

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +  CRA+++A+  DPSK++Y+P   K RF AL S ++D+L+RNT WT  R++ L   F  
Sbjct: 99  IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFIG 158

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 159 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 218

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HVILP+IISK PL P +  GD EW ++
Sbjct: 219 EARQQYLAGACDVYTTDASGLAATRATFDDPSNHVILPEIISKEPLGPLVRHGDNEWGDV 278

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+V AEELGIT  N+++ +  T NP++ R LG +   N+GE LGL  DW  + +
Sbjct: 279 VRWTLNALVAAEELGITSANMSEKAAGTDNPEINRLLGSE--GNLGEMLGLDADWAQKAL 336

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F + +G  + + + RG NA W+ GGL+YAPP R
Sbjct: 337 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 378


>gi|83854941|ref|ZP_00948471.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83941464|ref|ZP_00953926.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           EE-36]
 gi|83842784|gb|EAP81951.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83847284|gb|EAP85159.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           EE-36]
          Length = 347

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     L +    + +  AS L D+K RG L CG+ TGL GFA   ANG+W+GFD
Sbjct: 10  MNKSVFFG--ALTVAGLAAGAAAASTLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+ ++++P   K RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 68  VAVCRAVAAAVLGDPAAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS   L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 128 VNYYDGQGFMVPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRNNNISYEPVPVETNA 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P EH+ILP+IISK PL P +  GD +W ++
Sbjct: 188 EGQQQYLAGACDTYTTDASGLAATRATFENPGEHIILPEIISKEPLGPLVRHGDNDWGDV 247

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W  YA++ AEELG+T  N+ +++ +TTNP+V R LG +    +GE LGL  DW  + I
Sbjct: 248 TRWVLYALIAAEELGVTSANVEEMTTNTTNPEVARLLGTE--GTLGEMLGLEADWAKKAI 305

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R
Sbjct: 306 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 347


>gi|126737042|ref|ZP_01752777.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           SK209-2-6]
 gi|126721627|gb|EBA18330.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           SK209-2-6]
          Length = 338

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A   D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAALGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D P++HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDAPADHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  NI ++S  T+NP++ R LG +    +GE LGL+ DW    +
Sbjct: 239 VRWTLNALITAEELGVTSANIAEMSAGTSNPEINRLLGTE--GTLGEMLGLSADWGKNAV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+Y+PP R
Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYSPPFR 338


>gi|89110028|ref|AP_003808.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|170082796|ref|YP_001732116.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|218702040|ref|YP_002409669.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli IAI39]
 gi|254163203|ref|YP_003046311.1| putative amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|606209|gb|AAA58072.1| ORF_o305; frameshift upstream would extend start [Escherichia coli
           str. K-12 substr. MG1655]
 gi|85676059|dbj|BAE77309.1| predicted amino-acid transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|169890631|gb|ACB04338.1| predicted amino-acid transporter subunit; periplasmic-binding
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|218372026|emb|CAR19884.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli IAI39]
 gi|242378802|emb|CAQ33594.1| yhdW, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253975104|gb|ACT40775.1| predicted amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|253979260|gb|ACT44930.1| predicted amino-acid transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|309703687|emb|CBJ03028.1| Putative ABC transporter, substrate-binding protein [Escherichia
           coli ETEC H10407]
 gi|315137851|dbj|BAJ45010.1| extracellular solute-binding protein [Escherichia coli DH1]
          Length = 305

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|281180310|dbj|BAI56640.1| amino acid ABC transporter substrate binding component [Escherichia
           coli SE15]
          Length = 305

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|152998090|ref|YP_001342925.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150839014|gb|ABR72990.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 339

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 142/342 (41%), Positives = 214/342 (62%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+   +L  ++    A  L ++K RG +KCGI+ G  GF+     G+W G D
Sbjct: 1   MKKLIATAIIGAGVLSASASVYAADKLEEVKARGVMKCGIHPGKAGFSTPDTKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+ C+A+++A+F D SK++++ +N++ R  AL + +ID+L+R+T +T  R+   G+    
Sbjct: 61  VELCKAVAAAVFGDASKVEFITMNSRNRLTALVTDEIDMLARSTTFTATRDGLNGVDVTT 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++DGQ  ++ K+ G++S+ +L GA+IC   GTT+E  + DYF++  + Y  ++ E   
Sbjct: 121 PWFYDGQALMVKKELGVNSIEELDGATICTYPGTTSEKNINDYFESRGLSYKALIVEGSA 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY A+RCDA T D SAL A +     PS +VILP+ ISK PL   + QG+ EW  +
Sbjct: 181 ESTAAYLANRCDAVTNDASALAADRQGMPDPSANVILPERISKEPLGAYVKQGNDEWRQV 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+WT  A++ AEE GITQ N+++  K T  PDV R LG +   ++G+  GL   W Y  I
Sbjct: 241 VTWTAMALIEAEEQGITQSNVDEKLKSTK-PDVMRLLGTE--GSLGKNFGLDDKWAYNAI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRNLG  S LK  RG N L++KGGL+YA P R
Sbjct: 298 KAVGNYGEIFDRNLGKDSALKFDRGLNNLYTKGGLLYAYPFR 339


>gi|71083646|ref|YP_266366.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062759|gb|AAZ21762.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
          Length = 346

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 150/350 (42%), Positives = 221/350 (63%), Gaps = 12/350 (3%)

Query: 1   MYK--DFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M+K      S++ ++ + FT       +  +  L + +K+GF++CG++ GL GF+   A 
Sbjct: 1   MFKYVKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D +K+++ PL+AKERF AL S +IDILSRNT WTL R+  
Sbjct: 61  GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  GI+S SQ  +G S C   GTTTEL + D+F +  + Y 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+ FE+ +E+ AAY + RCD YT D S L A +     P +HV+LP+ ISK PL P + Q
Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHVVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD  W +IV W+   M+ AEE GI   N + + K + NP ++R +G +    +G A GL 
Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSE--GELGAAFGLD 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N +W+KGGL+Y PP R
Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346


>gi|311109272|ref|YP_003982125.1| general L-amino acid-binding periplasmic protein AapJ 5
           [Achromobacter xylosoxidans A8]
 gi|310763961|gb|ADP19410.1| general L-amino acid-binding periplasmic protein AapJ 5
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 144/318 (45%), Positives = 216/318 (67%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  +++RG + CG  TG  GF+   A G W+G DVD CRA+++A+F D +KI+ +PLN+
Sbjct: 24  TLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 83

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S  +++G
Sbjct: 84  QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 143

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E   E+  A+ A RCD ++ D S L +++
Sbjct: 144 ATICLQTGTSNENTLADWARANNVSYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 203

Query: 206 -LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                 P ++V+LP+IISK PL P + QGD  W NIV W+  AM+ AEE G++  N+++ 
Sbjct: 204 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVSSANVDEQ 263

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +K + NP+++R LG+      G  LGL + W Y I++ +GNYGE F+RN+G  S LKI R
Sbjct: 264 AK-SANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFERNVGQGSPLKIKR 320

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NA W++GGLMYA PIR
Sbjct: 321 GLNAQWTQGGLMYALPIR 338


>gi|262277476|ref|ZP_06055269.1| general L-amino acid-binding periplasmic protein AapJ [alpha
           proteobacterium HIMB114]
 gi|262224579|gb|EEY75038.1| general L-amino acid-binding periplasmic protein AapJ [alpha
           proteobacterium HIMB114]
          Length = 347

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 157/350 (44%), Positives = 226/350 (64%), Gaps = 11/350 (3%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M      +  L ++    T+           S L   K +GF+KCG++ G+ GF+   A+
Sbjct: 1   MKNIMKAIGSLSVLAFVLTACGDGGGAKKTTSTLDTTKSQGFVKCGVSQGVPGFSNADAS 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D SK++Y  L+AKERF ALQ+ +IDILSRNT WTL R+ S
Sbjct: 61  GNWTGIDVDVCRAVAAAVLGDASKVKYTGLSAKERFTALQAGEIDILSRNTTWTLERDAS 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  G+ SV+   +G  +C   GTTTEL +AD+FK+  +KY 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKSTGLKSVNDFKNGVKVCTNLGTTTELNMADFFKSKGVKYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+VFE+ +E+  AY A RCD YT D SAL A       P+EHV+LP+ ISK PL P + Q
Sbjct: 181 PVVFEKADEVVQAYDAGRCDTYTTDKSALAAQSTKMKDPTEHVVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD++W ++V W+    + AEE G+   NI+ + K++ NP +QR +G + + N GEALGL 
Sbjct: 241 GDSKWEDVVRWSLNVFIEAEEYGVNSGNIDSM-KESKNPAIQRIVGAEGTKN-GEALGLD 298

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             W+YRII+ +GNYGE + RNL   + +   RG N LW+KGG++Y PP+R
Sbjct: 299 NQWSYRIIKQIGNYGESYKRNL-ADTNIMPERGPNQLWTKGGILYVPPVR 347


>gi|15803803|ref|NP_289837.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 EDL933]
 gi|209920741|ref|YP_002294825.1| amino acid ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218555833|ref|YP_002388746.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli IAI1]
 gi|218696968|ref|YP_002404635.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli 55989]
 gi|218706883|ref|YP_002414402.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli UMN026]
 gi|12517899|gb|AAG58397.1|AE005554_8 putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13363614|dbj|BAB37564.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|209757458|gb|ACI77041.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757460|gb|ACI77042.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757462|gb|ACI77043.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757464|gb|ACI77044.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757466|gb|ACI77045.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209914000|dbj|BAG79074.1| amino acid ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218353700|emb|CAU99962.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli 55989]
 gi|218362601|emb|CAR00226.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli IAI1]
 gi|218433980|emb|CAR14897.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli UMN026]
          Length = 305

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|152989661|ref|YP_001346638.1| putative amino acid-binding protein [Pseudomonas aeruginosa PA7]
 gi|150964819|gb|ABR86844.1| probable amino acid-binding protein [Pseudomonas aeruginosa PA7]
          Length = 341

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 153/323 (47%), Positives = 230/323 (71%), Gaps = 2/323 (0%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   + L  +K++G+L+CG++ GL GF+   A G ++G DVDFCRAL++A+F D  K++
Sbjct: 21  TAQAGATLDAVKRKGYLQCGVSDGLAGFSYADAKGRYQGLDVDFCRALAAALFGDAGKVR 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           + PL+  ERF ALQS  +D+LSRNT WT  R+ +LG+ F  +TYFDGQGF+++++ G+SS
Sbjct: 81  FTPLSTTERFSALQSGTVDLLSRNTSWTSARDTALGIHFTGVTYFDGQGFLVNRRLGVSS 140

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E+   A  A +CD  + D S
Sbjct: 141 ARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQS 200

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NIV WT Y ++ AEELG+T  
Sbjct: 201 QLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSS 260

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+ + ++D+ NPDV R LG +   ++G+ L L +DW  +++R +GNYGE+F RN+G+ S 
Sbjct: 261 NVERQARDSRNPDVARLLGSE--GDVGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSP 318

Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342
           LK+PRG NA W+ GGL YAPPIR
Sbjct: 319 LKMPRGLNAQWNLGGLHYAPPIR 341


>gi|328950982|ref|YP_004368317.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451306|gb|AEB12207.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus
           hydrothermalis DSM 14884]
          Length = 341

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 140/338 (41%), Positives = 215/338 (63%), Gaps = 7/338 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           +L  ++L         S +  + +RG L CG+N    GF  +    G ++GFD+DFCRA+
Sbjct: 7   LLVAVLLVGALGFAQQSRMDVVLERGKLVCGVNNVAPGFGFLNEQTGRFEGFDIDFCRAV 66

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++A+FDDP  ++Y+PL AK RF A+Q+ ++D++ RNT  T+ R+ S+G+ F P+ ++DGQ
Sbjct: 67  AAALFDDPDAVEYVPLTAKARFSAIQTGEVDVVFRNTTITVSRDSSVGVDFLPVNFYDGQ 126

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEIDAAY 186
           G ++ K+ G++SV +L GA++C   GTTTE    D+ +A   +    + FE   ++  A+
Sbjct: 127 GVMVKKELGVTSVFELEGATVCTNQGTTTEKNWTDFVRAQGWQGGQLLTFEDFSKVFNAF 186

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + RCDA T D S L   K     P E VILP+ ISK PLA    Q D++W + ++W  Y
Sbjct: 187 ISGRCDAATTDKSGLAGWKAQASNPDEIVILPETISKEPLAGFTFQNDSKWRDALTWIVY 246

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
           A++ AEE GIT +N+++  K + +P ++RFLG++     GE LGL  D+  RI+RH+GNY
Sbjct: 247 ALIQAEEFGITSENVDEFLK-SDSPAIRRFLGVE--GKFGEDLGLPNDFVVRILRHVGNY 303

Query: 307 GEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342
           GE++DR+LG +S   IPR    N LW++GGL+YAPP R
Sbjct: 304 GEIYDRHLGPESPFYIPREGSLNELWTRGGLLYAPPFR 341


>gi|218550552|ref|YP_002384343.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           fergusonii ATCC 35469]
 gi|218358093|emb|CAQ90739.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia fergusonii ATCC 35469]
          Length = 305

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+G+  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|91763314|ref|ZP_01265278.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717727|gb|EAS84378.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
          Length = 346

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 220/350 (62%), Gaps = 12/350 (3%)

Query: 1   MYK--DFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M+K      S++ ++ + F        +  +  L + +K+GF++CG++ GL GF+   A 
Sbjct: 1   MFKYVKQLTSLVAMVAVLFAFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D +K+++ PL+AKERF AL S +IDILSRNT WTL R+  
Sbjct: 61  GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  GI+S SQ  +G S C   GTTTEL + D+F +  + Y 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+ FE+ +E+ AAY + RCD YT D S L A +     P +H++LP+ ISK PL P + Q
Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHIVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD  W +IV W+   M+ AEE GI   N + + K + NP ++R +G +    +G A GL 
Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSE--GELGAAFGLD 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N +W+KGGL+Y PP R
Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346


>gi|74313796|ref|YP_312215.1| putative periplasmic binding transport protein [Shigella sonnei
           Ss046]
 gi|73857273|gb|AAZ89980.1| putative periplasmic binding transport protein [Shigella sonnei
           Ss046]
          Length = 305

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 213/305 (69%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +T +DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|293602358|ref|ZP_06684804.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292819120|gb|EFF78155.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 358

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 217/318 (68%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            +  +++RG + CG  TG  GF+   A G W+G DVD CRA+++A+F D +KI+ +PLN+
Sbjct: 44  TVDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 103

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S  +++G
Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 163

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E   E+  A+ A RCD ++ D S L +++
Sbjct: 164 ATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 223

Query: 206 -LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                 P ++V+LP+IISK PL P + QGD +W NIV W+  AM+ AEE G+T KN+++ 
Sbjct: 224 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDKWLNIVRWSLSAMIEAEEYGVTSKNVDEQ 283

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
             ++ NP+++R LG+      G  LGL + W Y I++ +GNYGE FDRN+G  S LKI R
Sbjct: 284 L-NSANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFDRNVGEGSPLKIKR 340

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NA W++GGLMYA PIR
Sbjct: 341 GLNAQWTQGGLMYALPIR 358


>gi|147674492|ref|YP_001216921.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|262169332|ref|ZP_06037024.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
 gi|146316375|gb|ABQ20914.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|227013279|gb|ACP09489.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|262022145|gb|EEY40854.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
          Length = 342

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 162/318 (50%), Positives = 226/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A G+W+G DV++C+A+++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G+ S  +L+
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  D +Y+I++ +GNYGE FDR +G+ S LKI R
Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDCSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|260577146|ref|ZP_05845123.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sp. SW2]
 gi|259020620|gb|EEW23939.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sp. SW2]
          Length = 339

 Score =  332 bits (850), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 217/342 (63%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L   +    A  L D+K RG L CG N GL GFA   ANG+++GFD
Sbjct: 1   MKKSVFLGTLAVSGLL--AGMAAAGTLDDVKARGILNCGSNNGLTGFAAPDANGNYQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
              C+A+++A+  D SK++++PL  + RF AL S ++D+L RN+ WT  R+  L   F  
Sbjct: 59  AALCKAIAAAVLGDASKVKFVPLTGETRFTALASGEVDVLIRNSTWTFSRDTDLKFDFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+FK++NM Y P+      
Sbjct: 119 VNYYDGQGFMVKKELGVSSAKELDGATVCIQTGTTTELNLADFFKSNNMSYTPVTIADDS 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CDAYT D S L A++ T      H+ILP+IISK PL P +  GD  W +I
Sbjct: 179 EGQRQYVAGACDAYTTDASGLAAVRATLPDAENHIILPEIISKEPLGPVVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT+YA+V+AEE GIT  N+ + +  TTNP+++R LG     N+G  +GL K+W  R I
Sbjct: 239 VRWTYYALVSAEENGITAANVEETASTTTNPEIKRLLGASDD-NLGAMMGLDKEWAKRAI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F  NLG  + + + RG NALW++GGL YAPP R
Sbjct: 298 AAQGNYGEIFAANLGESTSIGLARGLNALWTQGGLQYAPPFR 339


>gi|218691562|ref|YP_002399774.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli ED1a]
 gi|218429126|emb|CAR10069.2| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli ED1a]
          Length = 305

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|39937855|ref|NP_950131.1| ABC transporter amino acid binding protein [Rhodopseudomonas
           palustris CGA009]
 gi|39651715|emb|CAE30237.1| ABC transporter, amino acid binding protein [Rhodopseudomonas
           palustris CGA009]
          Length = 344

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 236/350 (67%), Gaps = 14/350 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M+K  F + L + ++     +         +   L    +R  + CG+N GL GF+    
Sbjct: 1   MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +  L F  + Y+DGQGF++   + I S  +L G+ +CVQ GTTT+L LADYF+A+NMKY 
Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRANNMKYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E+ +++  AY+  +CD +T D+S LYAL+ T ++  +H+ILPD+ISK PLAP + Q
Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELGIT +NI +  K +  PDV R +G +     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTE--GAFGEDLGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  RIIRH+GNYGE++DRN+G    L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARIIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344


>gi|86135803|ref|ZP_01054382.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           MED193]
 gi|85826677|gb|EAQ46873.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           MED193]
          Length = 346

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 152/342 (44%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I   ++ +  A  L D+K RG L CG+ TGLVGFA   A+G+W+GFD
Sbjct: 9   MKNTVILG--ALTIAGLSAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNASGEWEGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 67  VAVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 127 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P  H +LP+IISK PL P +  GD EW ++
Sbjct: 187 EAQQQYLAGACDVYTTDASGLAATRATFEAPDAHTLLPEIISKEPLGPLVRHGDHEWGDV 246

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+++AEELG+T  NI +++  T NP++ R LG +    +GE LGL+ DW    I
Sbjct: 247 VRWTLNALISAEELGVTSANIGEMAAGTNNPEINRLLGTE--GTLGEMLGLSADWGKNAI 304

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F  N+G  + + + RG NA W+KGGL+Y+PP R
Sbjct: 305 AAGGNYGEVFADNIGEATPIGLARGLNAQWTKGGLLYSPPFR 346


>gi|310816976|ref|YP_003964940.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755711|gb|ADO43640.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein
           [Ketogulonicigenium vulgare Y25]
          Length = 338

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 212/342 (61%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        +  L   +    A+ L D+K R  L CG NTGL GFA   A+G W+GFD
Sbjct: 1   MKKSLV--FCAMGALAMGTGLAQAATLDDVKARDVLNCGTNTGLAGFAAPNADGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+K+ ++P     RF AL S +ID+LSR T WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDPTKVNFVPTTGATRFTALASGEIDMLSRVTTWTFQRDVELAFDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+    G++S  +L GA++C+Q GTTTEL LAD+F+A+ + Y P+  E   
Sbjct: 119 VNYYDGQGFIVPTSLGVTSAHELDGATVCIQTGTTTELNLADFFRANGISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CDAYT D S L A + T + P +H+ILP+IISK PL P +  GD +W +I
Sbjct: 179 EGQQQYLAGACDAYTTDASGLAATRATFEAPGDHIILPEIISKEPLGPVVRHGDNQWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A+V AEE GIT  NI ++S  T NP++ R LG +   N+GE LGL  +W  R I
Sbjct: 239 VRWSFFALVAAEEYGITSANIEELSAGTDNPEINRILGTE--GNLGEQLGLDAEWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F + LG  + + + RG NALW++GGL YA P R
Sbjct: 297 AAEGNYGEIFAKYLGTDTPIGLDRGLNALWTQGGLQYAMPFR 338


>gi|296533466|ref|ZP_06896047.1| cationic amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296266210|gb|EFH12254.1| cationic amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 350

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 162/319 (50%), Positives = 221/319 (69%), Gaps = 5/319 (1%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           ++ L  IK RG L CG+NTGL GFA+  + G W GFDV++CRAL+ A+F+D SK++Y+P 
Sbjct: 37  SATLDAIKARGTLSCGVNTGLAGFAQPDSQGRWTGFDVEYCRALAVALFNDASKVRYVPT 96

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A+ RF ALQS +ID+L RNT  TL R+ SLGL F  I ++DGQGF++    G+ S  +L
Sbjct: 97  TAQNRFTALQSGEIDVLPRNTTATLSRDTSLGLDFPAINFYDGQGFMVKASLGVKSAKEL 156

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA++CVQ GTTTE  L D+F+A+N+++ P++ ER+EE+ +AY A RCDAYT D+S L A
Sbjct: 157 DGATVCVQPGTTTEQNLTDWFRANNIRFTPVIIERLEELVSAYVAGRCDAYTTDVSGLAA 216

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P EHVILP++ISK PL PA+  GD  W ++V WTHYA++ AEE GIT  N+++
Sbjct: 217 TRSAQPNPGEHVILPEVISKEPLGPAVRHGDQRWADLVRWTHYALLAAEEFGITAANVDK 276

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
              +   P+VQR LG  K+  +G+ LG+   W  RII+  GNYGEMF R+L   + L I 
Sbjct: 277 AVAEDQRPEVQRLLG--KTGGLGQMLGVDNAWAARIIKATGNYGEMFTRHL---TPLGIQ 331

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG NA W++GGL YA P R
Sbjct: 332 RGPNAQWTQGGLQYAQPFR 350


>gi|218560337|ref|YP_002393250.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli S88]
 gi|218367106|emb|CAR04880.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli S88]
          Length = 305

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|150397777|ref|YP_001328244.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150029292|gb|ABR61409.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 336

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 155/324 (47%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +T A+ L  +K+RG L+CG++ G++GF+     G+W GFD+DFCRA+++A   D  ++
Sbjct: 16  GTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQV 75

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y+PL+ KERF ALQS ++D+LSR T WTL R+  LG++F  +TY+DGQ F++    G+ 
Sbjct: 76  KYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVK 135

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           SV +LSGAS+C + GTTTE  +ADYF A+ ++Y  I FE+ ++   A+ A RCD Y+ D 
Sbjct: 136 SVKELSGASVCTETGTTTEQNMADYFSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDA 195

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           SALY+ ++T + P   V+LP++ISK PL PA+ QGD +W+ +V WT +AMV AEELGIT 
Sbjct: 196 SALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAMVEAEELGITL 255

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           ++   + + +     +RFLG+D  +  G ALGL  DW Y+++  +GNYGE+F+R+LG  S
Sbjct: 256 ESAASLLE-SGTVAQKRFLGVDNEA--GRALGLNPDWAYQVVSAVGNYGEIFERHLGQAS 312

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG N LW+ GGL+YAPP+R
Sbjct: 313 ALKIDRGLNKLWNAGGLIYAPPVR 336


>gi|82778575|ref|YP_404924.1| putative periplasmic binding transport protein [Shigella
           dysenteriae Sd197]
 gi|81242723|gb|ABB63433.1| putative periplasmic binding transport protein [Shigella
           dysenteriae Sd197]
          Length = 305

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 213/305 (69%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL  F+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|311109014|ref|YP_003981867.1| general L-amino acid-binding periplasmic protein AapJ 3
           [Achromobacter xylosoxidans A8]
 gi|310763703|gb|ADP19152.1| general L-amino acid-binding periplasmic protein AapJ 3
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 149/340 (43%), Positives = 226/340 (66%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++     +L  +  +   +    +K +GF++CG++TG+ GF+   + G W G DVD
Sbjct: 2   KALKLAAAGTALLISSLTAHAGATFEAVKSKGFVQCGVSTGVAGFSVNDSKGGWIGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRAL+  +F D SK + + ++A +RF ALQS ++D+L RNT  +L R+ +LGL    + 
Sbjct: 62  LCRALAITMFGDASKAKIMAVSALQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVAVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG +++K   + S  +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER++EI
Sbjct: 122 YYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERLDEI 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A+   RCDA+TGD S L A +   + P ++ ILP+  SK PL P + QGD +W+N+V 
Sbjct: 182 IRAFAVGRCDAFTGDKSQLAAARSNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +AM+ AEE GIT KN++++ K +TNP+VQR LG+  +  +G+ LG+   W Y II++
Sbjct: 242 WTLFAMLEAEEYGITSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNIIKN 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F++NLG  S LK+PRG NA +  GGLMY  P+R
Sbjct: 299 IGNYGESFEKNLGPSSPLKLPRGLNASYRDGGLMYGWPVR 338


>gi|163745575|ref|ZP_02152935.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanibulbus
           indolifex HEL-45]
 gi|161382393|gb|EDQ06802.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanibulbus
           indolifex HEL-45]
          Length = 338

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 151/342 (44%), Positives = 214/342 (62%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L +    + +  A+ L D+K RG L CG+ TGL GFA   ANG+W+GFD
Sbjct: 1   MKKTVIFG--ALTVAGLAAGAAGAATLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID L+RNT WT  R+  L   F  
Sbjct: 59  VAVCRAVAAAVLGDKNAVEFVPTTGKTRFTALASGEIDFLARNTTWTFSRDTDLKFDFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRKNNISYEPVPVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +H++LP+IISK PL P +  GD EW +I
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFETPGDHILLPEIISKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A++ AEELGIT  NI +++ +T NP++ R LG +    +GE +GL  +W  R I
Sbjct: 239 TRWVLNALIAAEELGITSANIEEMTGNTNNPEIARLLGTE--GTLGEMIGLDNEWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGL+YAPP+R
Sbjct: 297 MAEGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLLYAPPVR 338


>gi|330429592|gb|AEC20926.1| putative ABC transporter periplasmic amino acid-binding protein
           [Pusillimonas sp. T7-7]
          Length = 338

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 146/340 (42%), Positives = 218/340 (64%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    + L   + F  + S        +K +GF++CG +T L GF+   + G W G D+D
Sbjct: 2   KLIKAAALGASLFFAAATSQAGETYDAVKAKGFVQCGTHTALPGFSIADSKGVWSGIDID 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            C+A+++ +F D +K +  P+  ++RF ALQS +ID+L+RNT  T+ R+ +LGL    + 
Sbjct: 62  LCKAIATMMFGDATKFKTTPVTTQQRFTALQSGEIDVLTRNTTATMTRDTTLGLMSAGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG ++ K+ G+ S  +LSGA++CVQ GTTTEL LAD+F+A+N+ + P+V    +E 
Sbjct: 122 YYDSQGIMVSKELGVKSAKELSGAAVCVQPGTTTELNLADWFRANNLDFKPVVINSPDEA 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             +Y A RCDA+T D S L  ++ T   P +HVILP+  SK PL P + QGD +W+ +V 
Sbjct: 182 MRSYVAGRCDAFTTDKSGLATIRTTLANPDDHVILPEDFSKEPLGPMVRQGDDQWFMVVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W    M+ AEE GIT KN++++ K ++NP++QR LG+  +  +G+ LGL   W Y +I+ 
Sbjct: 242 WALNTMLEAEEYGITSKNVDEMLK-SSNPNIQRILGV--TGEMGKGLGLDNKWAYNLIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+RNLG  S +K+ RG NA W  GGLMY  PIR
Sbjct: 299 VGNYGESFERNLGAGSAMKLERGINAQWRDGGLMYGWPIR 338


>gi|86751771|ref|YP_488267.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           HaA2]
 gi|86574799|gb|ABD09356.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris HaA2]
          Length = 341

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 164/320 (51%), Positives = 226/320 (70%), Gaps = 6/320 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +R  + CG+N GL GF+     G+W GFDVDFCRA+++AIF+DP+K++++P
Sbjct: 28  DTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDPNKVKFVP 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A ERF  LQS+++DILSRN+ W++ RE    L F  + Y+DG+GF++   + I +  +
Sbjct: 88  LDANERFKELQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALE 147

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G+ +CVQAGTTT L LADYF+A+NMKY  + F +++E+ AAY + +CD ++ D S LY
Sbjct: 148 LDGSKVCVQAGTTTLLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLY 207

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           AL+ T  +P +HVILPD+ISK PLAP + Q D EW  IV W+ YAM+ AEELG+T  NI+
Sbjct: 208 ALRQTLAKPGDHVILPDLISKEPLAPVVRQRDDEWMMIVKWSLYAMINAEELGVTSANID 267

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K +  PDV R +G +     GE LGL+KDW  RIIRH+GNYGE++DRN+G    L I
Sbjct: 268 EALK-SKKPDVMRLVGTE--GAYGEELGLSKDWAARIIRHVGNYGEVYDRNVGK---LGI 321

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LWS GG+ YAPPIR
Sbjct: 322 PRGLNQLWSAGGIQYAPPIR 341


>gi|209883786|ref|YP_002287643.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
 gi|209871982|gb|ACI91778.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
          Length = 349

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 158/320 (49%), Positives = 224/320 (70%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +RG ++CG+N GL GF+   A+G+W GFDVD CRA+++AIFDDP+K+ ++P
Sbjct: 33  DTQTLKRTLRRGAVQCGVNAGLPGFSNKDASGNWSGFDVDICRAVAAAIFDDPTKVNFVP 92

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+  +RF  LQ++ +DILSRN+ W++ RE+   L F  ++Y+DG+GF++ + + + S  +
Sbjct: 93  LDTNQRFKELQNRTVDILSRNSTWSMSREVDYELTFAAVSYYDGEGFMLRRSRNVDSALE 152

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  ICVQ+ TTT+L LADYF+A+NM Y  + F  V ++  AY + +CD  T D S LY
Sbjct: 153 LGGTRICVQSDTTTQLNLADYFRANNMTYDEMKFGNVGDLLKAYESGQCDVLTTDTSQLY 212

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +LT  +P +HVIL DIISK PLAP + Q D +W  IV W  YAM+ AEELG++ KNI+
Sbjct: 213 AYRLTLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAMLNAEELGVSSKNID 272

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K +  PDV R +G +   + GEALGLT DW  R+IRH+GNY E+++RN+G  S+L I
Sbjct: 273 EALK-SKKPDVMRLVGTE--GSYGEALGLTNDWAARVIRHVGNYSEVYERNVGVSSKLGI 329

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LW+ GG+ YAPPIR
Sbjct: 330 PRGLNQLWNAGGIQYAPPIR 349


>gi|148252293|ref|YP_001236878.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. BTAi1]
 gi|146404466|gb|ABQ32972.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 345

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 163/317 (51%), Positives = 228/317 (71%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    +RG + CG+N GL GF+     G+W GFDVDFCRA+++AIFDDP K +++PL+A
Sbjct: 32  TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKAKFVPLDA 91

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ERF  LQS+++DILSRNT W++ RE +  L F  + Y+DGQGF++ + + + +   L+G
Sbjct: 92  NERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRSRKLETALDLNG 151

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           + +CVQ  TT  L LADYF+A+NMKY  I F +++++  AY + +CD +T D+S LYAL+
Sbjct: 152 SKVCVQDSTTNALNLADYFRANNMKYEEIKFLKLDDVLKAYDSGKCDTFTADVSQLYALR 211

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L   +P++H ILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELG+T KNI++  
Sbjct: 212 LVLTKPNDHDILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K +  PDV R +G +     G+ LGL KDW  RIIRH+GNYGE+++RN+G++S+LKIPRG
Sbjct: 272 K-SKKPDVMRLVGNE--GTYGQDLGLAKDWAARIIRHVGNYGEVYERNIGSESKLKIPRG 328

Query: 326 YNALWSKGGLMYAPPIR 342
            N LW+ GG+ YAPPIR
Sbjct: 329 MNQLWNAGGIQYAPPIR 345


>gi|192293640|ref|YP_001994245.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
 gi|192287389|gb|ACF03770.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
          Length = 344

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 235/350 (67%), Gaps = 14/350 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M+K  F + L + ++     +         +   L    +R  + CG+N GL GF+    
Sbjct: 1   MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +  L F  + Y+DGQGF++   + I S  +L G+ +CVQ GTTT+L LADYF+ +NMKY 
Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMKYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E+ +++  AY+  +CD +T D+S LYAL+ T ++  +H+ILPD+ISK PLAP + Q
Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELGIT +NI +  K +  PDV R +G +     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTE--GAFGEDLGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  R+IRH+GNYGE++DRN+G    L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARVIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344


>gi|146343600|ref|YP_001208648.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. ORS278]
 gi|146196406|emb|CAL80433.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. ORS278]
          Length = 345

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 160/317 (50%), Positives = 226/317 (71%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    +RG + CG+N GL GF+     G+W GFDVDFCRA+++AIFDDP K +++PL+A
Sbjct: 32  TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKARFVPLDA 91

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ERF  LQS+++DILSRNT W++ RE +  L F  + Y+DGQGF++ + + + +   L+G
Sbjct: 92  SERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNG 151

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           + +CVQ  TT  L L DYF+A+NMKY  +   +++++  AY + +CD +T D+S LYAL+
Sbjct: 152 SKVCVQDSTTNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALR 211

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L   +P +H ILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELG+T KNI++  
Sbjct: 212 LVLTKPGDHDILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K +  PDV R +G +     G+ LGL+KDW  RIIRH+GNYGE+++RN+G++S+LKIPRG
Sbjct: 272 K-SKKPDVMRLVGNE--GTYGQDLGLSKDWAARIIRHVGNYGEVYERNVGSESKLKIPRG 328

Query: 326 YNALWSKGGLMYAPPIR 342
            N LW+ GG+ YAPPIR
Sbjct: 329 MNQLWNAGGIQYAPPIR 345


>gi|293605353|ref|ZP_06687737.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816245|gb|EFF75342.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 338

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 150/343 (43%), Positives = 219/343 (63%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + +   +L   S +        +KK+GFL+CG   G+ GF+ + + G+W G D
Sbjct: 1   MRK-FLTTAVAATLLCVASGAQAGVTFDAVKKKGFLQCG-FAGIPGFSVLDSKGEWTGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D SK++   L A+ +F ALQS +ID+LSRNT  TL R+ +LGL    
Sbjct: 59  VDMCRAVAAAMFGDASKVKGNVLTAQAKFTALQSGEIDMLSRNTTQTLTRDTTLGLIGVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++D QG I+ K   + SV +L GA+ICVQ GTTTEL LADYF++  + + P++ E  +
Sbjct: 119 VNFYDAQGLIVKKSMNVKSVKELDGATICVQPGTTTELNLADYFRSRGLTFKPVLVENYD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E      + RCDAYT D S   A ++    +P +  IL + +SK PL P + QGD +W+N
Sbjct: 179 ENFRLLESGRCDAYTNDKSNTAANMRTRLAKPEDWEILSENLSKEPLGPMVRQGDEQWFN 238

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W+  AM+ AEE GIT KN++++ K +TNP+VQR LG+  +  +G+ LGL   W Y I
Sbjct: 239 VVRWSLNAMLEAEEYGITSKNVDEMLK-STNPNVQRILGV--TPGMGKNLGLDDKWAYNI 295

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE +DR +G  S LK+ RG N  W++GGLMY  P+R
Sbjct: 296 IKQVGNYGESYDRAMGKDSPLKLERGLNKQWTQGGLMYGWPVR 338


>gi|330814052|ref|YP_004358291.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487147|gb|AEA81552.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 343

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 150/346 (43%), Positives = 221/346 (63%), Gaps = 7/346 (2%)

Query: 1   MYK-DFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    F VSI  +++L       +   S L   K +GF+KCG++ GL GF+   A+G+W 
Sbjct: 1   MKIIKFAVSIFAVLLLAACGNESAKKTSTLDTTKSQGFVKCGVSQGLPGFSNADASGNWA 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD CRA+++A+  D +K++Y PL+AKERF ALQ+  ID+LSRNT WTL R+ ++GL 
Sbjct: 61  GMDVDVCRAVAAAVLGDATKVKYTPLSAKERFTALQAGDIDVLSRNTTWTLERDAAIGLE 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F  + ++DGQGF++ KK GI SV     G  +C   GTTTEL +AD+FKA  + Y P+VF
Sbjct: 121 FVGVNFYDGQGFMVRKKSGIKSVKDFQNGTKVCTNTGTTTELNMADFFKAAGVSYEPVVF 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E+ +E+  AY + RCD YT D S L + +     P +H++LP+ ISK PL P + +GD  
Sbjct: 181 EKADEVVQAYDSGRCDTYTTDKSGLASQRTKLTAPDDHIVLPETISKEPLGPVVREGDAT 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W ++V W+    + AEE G+  +NI+ +  D+ NP +QR +G + + N G AL L + W+
Sbjct: 241 WADVVRWSLNVWIEAEEYGVNSENIDSMM-DSKNPAIQRIVGAEGTKN-GAALNLDQKWS 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           Y +I+ +GNY E + RNL   + +   RG NALW+ GG++Y PP+R
Sbjct: 299 YNLIKQVGNYAESYKRNL-ADTGIMPDRGPNALWTNGGILYVPPVR 343


>gi|159042874|ref|YP_001531668.1| glutamate/glutamine/aspartate/asparagine ABC transporter
           [Dinoroseobacter shibae DFL 12]
 gi|157910634|gb|ABV92067.1| glutamate/glutamine/aspartate/asparagine ABC transporter
           [Dinoroseobacter shibae DFL 12]
          Length = 338

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L      +    A  L +++ RG + CGI+TGLVGFA   ANG+W+GFD
Sbjct: 1   MKKSVL--FGALAAAGLAATGAAADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+F DP+ + + P+  + RF  L S +ID+L+RNT WT  R++ L L F  
Sbjct: 59  VAVCRAVAAAVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G+SS ++L GA++C+Q GTTTEL LAD+F+A+N+ + P+      
Sbjct: 119 INYYDGQGFMVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTAS 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P EHV+LP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEELG+T  N+ +++  T NP++ R LG +   N+GE LGL+ DW   +I
Sbjct: 239 VRWTLNALIAAEELGVTSANVAELAAGTDNPEINRLLGTE--GNLGEQLGLSADWAVNVI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F+ ++G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 KAGGNYGEIFETHIGENTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|154245585|ref|YP_001416543.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154159670|gb|ABS66886.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 337

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 148/315 (46%), Positives = 209/315 (66%), Gaps = 3/315 (0%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             +K RG L CG++ GL GF+   A+G W GFDVD CR L++AIF+DP+K++++PL+A E
Sbjct: 26  KTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVPLSADE 85

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           RF AL    +D+LSRN+ WTL RE  LGL F  I Y+DGQGF++   + ++S  +L  + 
Sbjct: 86  RFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSK 145

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CVQAGTT E    DYF A+ M    +      ++  AY   +CD  T D+S LYAL+LT
Sbjct: 146 VCVQAGTTAEDNTKDYFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLT 205

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
             +P +H++LPD+ISK PL P + QGD +W+N+V WT + M+ AEELG++   I+     
Sbjct: 206 MAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVKWTIFGMINAEELGVSTTTIDAALA- 264

Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327
           +  P+V R +G D     GE LG++ D+  RI++ +GNYGE F+RN+G  S+L IPRG N
Sbjct: 265 SKKPEVIRLVGND--GKFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRGIN 322

Query: 328 ALWSKGGLMYAPPIR 342
            LWS GG+ YAPP+R
Sbjct: 323 QLWSMGGIQYAPPVR 337


>gi|91978841|ref|YP_571500.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           BisB5]
 gi|91685297|gb|ABE41599.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris BisB5]
          Length = 341

 Score =  328 bits (841), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 162/320 (50%), Positives = 223/320 (69%), Gaps = 6/320 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +R  + CG+N GL GF+     G+W GFDVDFCRA+++AIF+DP+K++++P
Sbjct: 28  DTKTLKRTIRRDAVLCGVNKGLPGFSTPDDKGNWSGFDVDFCRAVAAAIFNDPNKVKFVP 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A ERF  LQS+++DILSRN+ W++ RE    L F  + Y+DGQGF+    + + +  +
Sbjct: 88  LDANERFKELQSRKVDILSRNSTWSMSRETGYELYFPAVAYYDGQGFMAPAARKVETALE 147

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G+ +CVQ GTTT L LAD+F+ +NMKY  + F +++E+ +AY+  +CD +T D S LY
Sbjct: 148 LDGSKVCVQEGTTTLLNLADFFRTNNMKYQEVKFGKLDEVVSAYKNGQCDTFTADASQLY 207

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           AL+ T D+P +HVILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELGIT  NI+
Sbjct: 208 ALRQTLDKPGDHVILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSINID 267

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K +  PDV R +G +     GE LGL KDW  RIIRH+GNYGE++DRN+G    L I
Sbjct: 268 EALK-SKKPDVMRLVGTE--GTYGEELGLPKDWAARIIRHVGNYGEIYDRNVGK---LGI 321

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LW+ GG+ YAPPIR
Sbjct: 322 PRGLNQLWNAGGIQYAPPIR 341


>gi|27376134|ref|NP_767663.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27349273|dbj|BAC46288.1| bll1023 [Bradyrhizobium japonicum USDA 110]
          Length = 345

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 156/317 (49%), Positives = 228/317 (71%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    +RG + CG+N GL GF+     G+W GFDVDFCRA+++AIF+DP+K +++ L+A
Sbjct: 32  TLKRTVRRGEVLCGVNKGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFNDPAKAKFVALDA 91

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ERF  LQS+++DILSRN+ W++ RE+   L F  + Y+DG GF++ + +   +   L+G
Sbjct: 92  SERFKELQSRKVDILSRNSTWSMARELDYDLYFPAVAYYDGAGFMLPRSRNKETSLDLTG 151

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           + +CVQ GTTT L ++DYF+A+NMKY  + F++++++  AY   +CD  + D+S LYAL+
Sbjct: 152 SKVCVQTGTTTALNVSDYFRANNMKYEEVKFDKLDDVVKAYDTGKCDTLSADVSQLYALR 211

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L   +P +H+ILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELG++ +NI++  
Sbjct: 212 LNLSKPGDHMILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVSSENIDEAL 271

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K +  P+V R +G +   N GE LGLTKDW  RIIR++GNYGEM++RN+G +S+LKIPRG
Sbjct: 272 K-SKKPEVMRLVGTE--GNYGEQLGLTKDWVVRIIRNVGNYGEMYERNIGEKSKLKIPRG 328

Query: 326 YNALWSKGGLMYAPPIR 342
            N LW+ GG+ YAPP+R
Sbjct: 329 MNQLWNAGGVQYAPPMR 345


>gi|320184061|gb|EFW58881.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella flexneri CDC 796-83]
          Length = 349

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 157/351 (44%), Positives = 234/351 (66%), Gaps = 11/351 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL+GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60

Query: 60  DVDF--------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           DVD         CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+
Sbjct: 61  DVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRD 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY
Sbjct: 121 AGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            P+ F+R +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + 
Sbjct: 181 TPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVR 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L
Sbjct: 241 RGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 DNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 349


>gi|326794954|ref|YP_004312774.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326545718|gb|ADZ90938.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 343

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 136/345 (39%), Positives = 213/345 (61%), Gaps = 5/345 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   + IL   +    S++   AS L ++K RG++ C I     GF  +   G+W+G 
Sbjct: 1   MKKATSLLILASSMFSAASYAAETASTLDEVKSRGYMNCVIGNSFPGFYSLNKEGEWQGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D CR++S+A+F D SK+++LP+   + F +++S + D+LS+   WTL R+   GL F 
Sbjct: 61  DIDMCRSVSAAVFGDSSKVKFLPVQWAQSFTSIKSGKGDMLSKGMTWTLSRDTQQGLDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              ++DGQGF++ K  G+ SV  L GA++CV  GT++EL +AD+ +A+N+    +VF+  
Sbjct: 121 DTYFYDGQGFMVRKDLGVDSVYDLEGATVCVLTGTSSELNIADFSRANNLDLKTVVFDDS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
              + A+    CDA T D S L A +     P ++++LP+ ISK  L+ A+ Q D+EW N
Sbjct: 181 SVRNTAFFNDNCDALTNDKSGLAAQRSAAQNPDDYIVLPETISKEALSFAVKQNDSEWAN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT  AMV AEE GIT  N++Q+  ++ +P V+R LG++   N+   LGL +DW Y++
Sbjct: 241 VVKWTFAAMVAAEEYGITSDNVDQMRSESNSPVVRRLLGVE--GNLNTGLGLPQDWAYQV 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+++RN+G  S L + R    NALW  GG+MYA   R
Sbjct: 299 IKSVGNYGEVYERNVGPNSVLGLKREGTLNALWKDGGMMYAKSFR 343


>gi|187479528|ref|YP_787553.1| L-amino acid ABC transporter substrate-binding protein [Bordetella
           avium 197N]
 gi|115424115|emb|CAJ50668.1| L-amino acid ABC transporter, substrate-binding protein [Bordetella
           avium 197N]
          Length = 338

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 148/321 (46%), Positives = 225/321 (70%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              +   ++KK+GF++CG++TG+ GF+   + G+WKG DVD CRA+++A+F D SK +  
Sbjct: 21  QAGTTFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDLCRAVAAAMFGDASKFKVT 80

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PLN ++RF ALQS ++D+L+RNT  TL R+ +LGLA   + Y+D QG ++ K  G+ S  
Sbjct: 81  PLNTQQRFTALQSGEVDVLTRNTTLTLSRDTTLGLADVAVNYYDSQGVMVSKDLGVKSAK 140

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +L GA++CVQ GTTTEL LAD+F+++N+++ P+V ++ +EI  A+ A RCDA+T D S L
Sbjct: 141 ELGGATVCVQPGTTTELNLADWFRSNNIEFKPVVIDKYDEIVRAFSAGRCDAFTTDKSQL 200

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            + + T ++P  +VILP+  SK PL P + QGD +W+N++ WT  AM+ AEE GIT KN+
Sbjct: 201 ASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNMIRWTLTAMIEAEEYGITSKNV 260

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
            +++K + NP++QR LG+  +  +G+ LG+   W Y I++ +GNYGE F+ NLG  S +K
Sbjct: 261 EEMTK-SGNPNIQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESFEANLGKNSPMK 317

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG NA +  GGLMY  PIR
Sbjct: 318 LERGMNASYKHGGLMYGWPIR 338


>gi|260426367|ref|ZP_05780346.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Citreicella sp. SE45]
 gi|260420859|gb|EEX14110.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Citreicella sp. SE45]
          Length = 339

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 149/343 (43%), Positives = 215/343 (62%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L +    + +  A+ L D+K RG L CG++TGL GF+   ANG W+GFD
Sbjct: 1   MKKTVILG--ALTVAGLAAGAAGAATLDDVKARGSLNCGVSTGLTGFSAPDANGVWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++P   + RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDPMAVEFVPTTGQTRFTALASGEIDVLARNTTWTFSRDVDLKFEFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P +HVILP+IISK PL P +  GD+EW +I
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFEAPGDHVILPEIISKEPLGPLVRHGDSEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A+V AEE G+T  NI ++S     NP++ R LG +    +G   GL  DW  + 
Sbjct: 239 VRWTLNALVAAEEYGVTSANIGELSAAPGNNPEINRLLGTE--GELGAMFGLEADWAKKA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++ +G  + + + RG NA W++GGL+Y+PP R
Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLLYSPPFR 339


>gi|159028157|emb|CAO89764.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 351

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 6/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+ S +A  L  +K RG L CGIN  + GF+ V   G++ G DV  CRA+++A+FDDP+K
Sbjct: 31  TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPAK 90

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y  L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F    ++DGQG +  K   I
Sbjct: 91  VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNI 150

Query: 138 SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             +  LSG SICV +GTTTE  LAD   KA    Y PIV + VE +  AY+A RC A T 
Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A +    RP +H +L  +ISK PLAPA+  GD  W N V    ++++  EE GI
Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
             +NI     D+ +P ++RFLGID+   +GE +GL  D+  R+++ +GNYGE++DR +G 
Sbjct: 271 NSQNIATF-ADSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGQ 327

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
              L++ RG N LW+KGGL+Y+PP R
Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351


>gi|166368449|ref|YP_001660722.1| amino acid transport system substrate-binding protein [Microcystis
           aeruginosa NIES-843]
 gi|166090822|dbj|BAG05530.1| amino acid transport system substrate-binding protein [Microcystis
           aeruginosa NIES-843]
          Length = 351

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 6/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+ S +A  L  +K RG L CGIN  + GF+ V   G++ G DV  CRA+++A+FDDPSK
Sbjct: 31  TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPSK 90

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y  L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F    ++DGQG +  K   +
Sbjct: 91  VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNV 150

Query: 138 SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             +  LSG SICV +GTTTE  LAD   KA    Y PIV + VE +  AY+A RC A T 
Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A +    RP +H +L  +ISK PLAPA+  GD  W N V    ++++  EE GI
Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
             +NI     D+ +P ++RFLGID+   +GE +GL  D+  R+++ +GNYGE++DR +G 
Sbjct: 271 NSQNIATF-ADSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGK 327

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
              L++ RG N LW+KGGL+Y+PP R
Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351


>gi|30064596|ref|NP_838767.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 2457T]
 gi|56480353|ref|NP_709270.2| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|30042855|gb|AAP18578.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 2457T]
 gi|56383904|gb|AAN44977.2| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|313648492|gb|EFS12934.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           flexneri 2a str. 2457T]
          Length = 305

 Score =  327 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 147/305 (48%), Positives = 212/305 (69%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL  F+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ + NY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|85703851|ref|ZP_01034954.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           217]
 gi|85671171|gb|EAQ26029.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           217]
          Length = 339

 Score =  327 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 154/343 (44%), Positives = 222/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + ++ A+ L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAVCRAVAAAVLSDANAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDTDLKFDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L + +   + P++HVILP+IISK PL P +  GD +W +I
Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFESPTDHVILPEIISKEPLGPLVRHGDNDWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT YA+V AEE+GIT  NI ++ +    NP++ R LG +   ++G  +GL  +W  R 
Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGDNPEINRILGTE--GDLGAMIGLDNEWAKRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R
Sbjct: 297 IAASGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339


>gi|227325810|ref|ZP_03829834.1| Extracellular solute-binding protein, family 3 precursor
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 350

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 137/353 (38%), Positives = 208/353 (58%), Gaps = 14/353 (3%)

Query: 1   MYKDFFVSILCLIILF----------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M +         ++              + + N   L  IK RG L CG++    GF+ +
Sbjct: 1   MLRKLLSLTTATVLTLGSLLLPVAQATAADAGNGETLKKIKARGELVCGVHPARHGFSAI 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            + G W G DVD+CRAL++AIF D +K+++  L+  +RF A+QS ++D+LSRN    L R
Sbjct: 61  DSKGQWTGLDVDYCRALAAAIFGDANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSR 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           + SLGL F P T++ G GF++     +  V  L GA++C+  G++TE  +A  F + N+ 
Sbjct: 121 DTSLGLNFAPPTFYTGTGFMVRTSANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLH 180

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPA 229
           Y P+V E  +E  AAY + RCD    D  AL  ++    ++PS+HVILP I SK PLA A
Sbjct: 181 YTPVVIENNKEYVAAYLSGRCDVIARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMA 240

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
           + QGD +WY+IV W  YA   AEE+ I Q+N++   K +T+PD+Q  LG+  + + G+ L
Sbjct: 241 VRQGDDQWYDIVKWVVYATFNAEEMEIGQQNVDSKLK-STDPDIQALLGV--TGDYGQKL 297

Query: 290 GLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GL   W Y +I+ +GNYG++++R+ G  +   + R  N LW+KGGL+Y  PIR
Sbjct: 298 GLNNQWAYNLIKQVGNYGDIYNRHFGPDTPAPLERDLNNLWTKGGLLYGLPIR 350


>gi|293602040|ref|ZP_06684495.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
 gi|292819570|gb|EFF78596.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
          Length = 361

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 227/343 (66%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       +     LF +S++  A      +K +GF++CG++TG+ GF+   + G W G 
Sbjct: 24  MK--ALKHVAAGTALFLSSWAATAGVTFDSVKNKGFVQCGVSTGVAGFSVNDSKGGWIGL 81

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRAL+  +F DP+K + + ++A +RF ALQS ++D+L RNT  +L R+ +LGL   
Sbjct: 82  DVDLCRALAITMFGDPAKSKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGV 141

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+D QG +++K   + S  +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER+
Sbjct: 142 GVNYYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERL 201

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +EI  A+   RCDA+TGD S L A +   + P ++ ILP+  SK PL P + QGD +W+N
Sbjct: 202 DEIIRAFAVGRCDAFTGDKSQLAAARSNLENPGQYDILPENFSKEPLGPMVRQGDEQWFN 261

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE G+T KN++++ K +TNP+VQR LG+  +  +G+ LG+   W Y I
Sbjct: 262 VVRWTMFAMLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNI 318

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+H+GNYGE F++NLG  S LK+ RG NA +  GGLMY  P+R
Sbjct: 319 IKHIGNYGESFEKNLGPSSPLKLSRGLNASYRDGGLMYGWPVR 361


>gi|330938900|gb|EGH42413.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 324

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 212/324 (65%), Gaps = 2/324 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G++S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPR 324
           + +GNYGE+F+RNLG  + LKI R
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKR 324


>gi|296448618|ref|ZP_06890487.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
 gi|296253868|gb|EFH01026.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
          Length = 351

 Score =  325 bits (834), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 148/338 (43%), Positives = 210/338 (62%), Gaps = 3/338 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F  +L L     +  +  A+ LG + +RG L CG+  G  GFA     G+W G DVDFC
Sbjct: 17  MFALLLPLAPARASGLAVRAATLGQVTERGRLLCGVGAGQPGFARQDEKGEWSGLDVDFC 76

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA+++AIFDDPS+   + L  KER  ALQ+ ++D+L+    WTL R+   G+AF    +F
Sbjct: 77  RAVAAAIFDDPSRASIVALTPKERLKALQTGEVDLLAHGAAWTLARDAGQGVAFVATLFF 136

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQGF+  +K+   S   L+G SICVQ GT+ EL L D  +A +    P +F   EE   
Sbjct: 137 DGQGFLTARKRAAQSRRDLAGLSICVQQGTSFELDLVDGRRASDKPVEPRLFPSFEEAAE 196

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           AY   +CDA T D+S L A +   + P  H IL ++I K PL P + QGD +W+++V WT
Sbjct: 197 AYAQGQCDALTADLSTLAAERARLEAPDRHAILAELIDKEPLGPIVRQGDAQWFDVVRWT 256

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
           ++AM+ AEELG+   N+++  K + +P  +R LG++      E  GL  DW YRI++H+G
Sbjct: 257 YFAMLDAEELGVASTNVDEALK-SADPRTRRLLGVE--GGRVEGFGLEPDWAYRIVKHVG 313

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NYGE+F+RNLG+ S L + R  NALW++GGLMYAPP+R
Sbjct: 314 NYGEVFERNLGHGSPLGLDRRLNALWTEGGLMYAPPVR 351


>gi|99080135|ref|YP_612289.1| lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp.
           TM1040]
 gi|99036415|gb|ABF63027.1| Lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp.
           TM1040]
          Length = 338

 Score =  325 bits (833), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F     L +    + +  A  L D+K R  L CG++TGLVGF+   ANG+W+GFD
Sbjct: 1   MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +  CRA+++A+  DPSK++Y+P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D  + HVILP+IISK PL P +  GD EW ++
Sbjct: 179 EARQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  AM+ AEELGIT  N+ + +  T NP++ R LG +    +GE LGL  D+  + +
Sbjct: 239 VRWTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTE--GTLGEMLGLEADFAQKAL 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F + +G  + + + RG NA W+ GGL+YAPP R
Sbjct: 297 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 338


>gi|332098837|gb|EGJ03794.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           boydii 3594-74]
          Length = 357

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 157/359 (43%), Positives = 234/359 (65%), Gaps = 19/359 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL+GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60

Query: 60  DVDF----------------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           DVD                 CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRN
Sbjct: 61  DVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADY
Sbjct: 121 TTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADY 180

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           FKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++LP++ISK
Sbjct: 181 FKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISK 240

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
            PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   
Sbjct: 241 EPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--G 298

Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 357


>gi|115522563|ref|YP_779474.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           BisA53]
 gi|115516510|gb|ABJ04494.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris BisA53]
          Length = 347

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 232/350 (66%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K  F + L + ++  T+ +         +   L    +R  + CG+N GL GF+    
Sbjct: 1   MLKRTFQTGLGIGLVVATAIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSIPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G W GFDVDFCRA+++AIFDDP K++++ L+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGSWTGFDVDFCRAVAAAIFDDPKKVKFVALDANERFKELQSRKVDILSRNSTWSMARET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              L F  + Y+DG GF++   + I S  +L G+ +CVQ  TTT+L +AD+F+A+N+KY 
Sbjct: 121 GFELYFPAVAYYDGAGFMLPASRKIDSALELDGSQVCVQDATTTQLNVADFFRANNLKYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +   ++EE+  AY A +C+  + DIS LYAL++   +P +H ILPD+ISK PLAP + Q
Sbjct: 181 EVKAAKLEEVVKAYEAGQCNVLSADISQLYALRVNFAKPIDHTILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELG++  NI++  K +  PDV R +G +     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGVSSTNIDEALK-SKKPDVMRLVGTE--GAYGEELGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  RIIRH+GNYGE+++RN+G+ S+L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARIIRHVGNYGEVYERNVGSDSKLGIPRGLNQLWSAGGIQYAPPIR 347


>gi|316936277|ref|YP_004111259.1| family 3 extracellular solute-binding protein [Rhodopseudomonas
           palustris DX-1]
 gi|315603991|gb|ADU46526.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris DX-1]
          Length = 344

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 233/350 (66%), Gaps = 14/350 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M+K  F + L L ++     +         +   L    +R  + CG+N GL GFA    
Sbjct: 1   MFKRTFQTGLALGLVVAAGIAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFATPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+W GFDVDFCRA+++AIFDDP+K+++LPL+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGNWTGFDVDFCRAVAAAIFDDPTKVKFLPLDANERFKELQSRKVDILSRNSTWSMSRET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +  L F  + Y+DGQGF++   + I S  +L G+ +CVQ GTTT+L LADYF+ +NM Y 
Sbjct: 121 NYELYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMTYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E+ +++  AY+  +CD +T D+S LYAL+ T     +HVILPD+ISK PLAP + Q
Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFANAGDHVILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELGIT +NI++  K +  PDV R +G D     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIDEALK-SKKPDVMRLVGTD--GAFGEDLGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  RI+RH+GNYGE++DRN+G    L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARIVRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344


>gi|83592118|ref|YP_425870.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83575032|gb|ABC21583.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 350

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 140/326 (42%), Positives = 203/326 (62%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           F+S +     L  IK RG +K G+     GF+   + G W+GF +D  RAL+  +F+DP 
Sbjct: 28  FSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAVTVFNDPE 87

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K +++  + ++R  ALQS + DIL      T+ R   LG  F P+ ++DGQG ++ KK G
Sbjct: 88  KAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLG 147

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+  S+L GA++CVQ GTT EL +AD+F+ H + + P+V E   E   A+ + RCD  T 
Sbjct: 148 ITKGSELDGATVCVQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQ 207

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L   +      +++V+LP+ ISK PLAPAI  GD  W  IV+WT YA++ AEELGI
Sbjct: 208 DSSDLAIRRTLLPNAADYVLLPERISKEPLAPAIRYGDDRWLEIVNWTVYALIEAEELGI 267

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           TQ  I+     + NP ++RFLG+D S  + EA GL   + Y II+ +GNYGE+F+R++G 
Sbjct: 268 TQATIDSFL-GSDNPSIRRFLGVDPS--LAEATGLDAKFAYNIIKALGNYGEVFERSVGK 324

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            S+L   RGYN  W++GGL+Y+PP R
Sbjct: 325 ASKLGFERGYNQPWTQGGLLYSPPFR 350


>gi|126731935|ref|ZP_01747738.1| ABC transporter amino acid-binding protein [Sagittula stellata
           E-37]
 gi|126707467|gb|EBA06530.1| ABC transporter amino acid-binding protein [Sagittula stellata
           E-37]
          Length = 337

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 146/316 (46%), Positives = 208/316 (65%), Gaps = 2/316 (0%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+K  G LKCG++ GL GF+     G+W G DVD+CRAL++A+  D   ++Y+ L+AK
Sbjct: 24  LDDVKAAGSLKCGVSQGLPGFSATNDAGEWTGIDVDYCRALAAAVLGDADAVEYVSLSAK 83

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           +RF AL S +ID+LSRNT WT+ R+  LG+ F  + Y+DGQG ++    GI+S  +L GA
Sbjct: 84  DRFTALSSGEIDVLSRNTTWTITRDTDLGITFVGVNYYDGQGMMVPAGLGITSALELDGA 143

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +IC   GTTTEL + DYF  H+M +  +  E  +E+ AAY A RCD +T D S + A +L
Sbjct: 144 TICTNTGTTTELNITDYFTQHDMSFELVALENSDEVIAAYGAGRCDVFTTDRSGVAAERL 203

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               P  HV+LP+ ISK PL P++  GD +W  +  W    ++ AEE GIT +N++++ +
Sbjct: 204 KLADPDAHVVLPETISKEPLGPSVRAGDEQWMKVAKWVLNGVIEAEEYGITSENVDEMLE 263

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
            + NP VQR LG    ++ G  LGL  D+ Y+ ++ +GNYGEM+DRN+G  + LK+ RG 
Sbjct: 264 -SENPSVQRILGA-GDNDYGAPLGLGADFVYQAVKQVGNYGEMYDRNVGPDTPLKLERGV 321

Query: 327 NALWSKGGLMYAPPIR 342
           N LW+KGG MYAPPIR
Sbjct: 322 NNLWNKGGFMYAPPIR 337


>gi|288962140|ref|YP_003452435.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288914406|dbj|BAI75891.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 353

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 152/338 (44%), Positives = 232/338 (68%), Gaps = 4/338 (1%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
                  +    +  +   +    +K++G+++CG+N GL GF+     G W G DVD CR
Sbjct: 19  LSVSAFALSGALSGTAEAGATFDGVKQKGYVQCGVNLGLYGFSAPDDKGKWSGLDVDMCR 78

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+++A+F D  K++Y PL+A++R  ALQS +IDIL+RNT  TL R+ + GL F P  Y+D
Sbjct: 79  AVAAAVFGDAEKVKYTPLSAQQRLPALQSGEIDILARNTTRTLTRDTANGLNFAPTNYYD 138

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           GQGF++  K G+ S  QL+GA++CV  GTTTE  ++DYF+A+ M + P+V E+ EE++ A
Sbjct: 139 GQGFMVSAKLGLKSAKQLNGATVCVLPGTTTEQNVSDYFRANKMTFKPVVIEKNEELNKA 198

Query: 186 YRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           + A RCDA T D S L A++      P+++VILP++ISK PL+PAI QGD EW N+V+W 
Sbjct: 199 FFAGRCDALTSDASQLAAIRAAEVPNPADYVILPELISKEPLSPAIRQGDEEWTNLVTWA 258

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            YAMV AEE G+T + ++     + +PDV+R LG+  ++  G+ALG+ ++W + II+ +G
Sbjct: 259 FYAMVQAEEKGLTSETVDAAL-TSPDPDVKRLLGV--TAGNGKALGVEENWAFNIIKQVG 315

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NY + ++RN+G  S+LK+PRG NAL+++GGLMYAPP++
Sbjct: 316 NYAQSYERNVGAGSKLKMPRGQNALYTEGGLMYAPPMK 353


>gi|317405857|gb|EFV86140.1| extracellular solute-binding protein [Achromobacter xylosoxidans
           C54]
          Length = 340

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 145/343 (42%), Positives = 228/343 (66%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +   L +   +  +     L  +KK+G+++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRLISFAAGALALACASQAAVAGPTLDAVKKKGYVQCGLTDGVSGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP+K +   L+ ++RF ALQS ++D+L R    T  R+ SLGL+   
Sbjct: 61  VDICRAVAAAVFGDPTKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG +++KK G+ S  +L+GA++CVQ GTTTEL LAD+F+A+N+++ P+V ++V 
Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANNIEFKPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P ++ ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQKN++++ K + NP++ R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNISRILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G  S+L + RG NALWSKGG MY  PIR
Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWSKGGAMYPWPIR 340


>gi|33600508|ref|NP_888068.1| ABC transporter substrate-binding protein [Bordetella
           bronchiseptica RB50]
 gi|33568107|emb|CAE32020.1| Putative ABC transport system, substrate-binding protein
           [Bordetella bronchiseptica RB50]
          Length = 336

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 198/342 (57%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  I    T+   +A  L D+K RG L C   TG  GF+     G   G +
Sbjct: 1   MKKTLTSLLVAAIA--HTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP + + + LN  +RF ALQS ++DIL   T WTL RE +  L    
Sbjct: 59  VDVCRAIATAVFGDPERHKIVVLNPTQRFTALQSGEVDILFNTTTWTLSREGAGALYAGV 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +      I+S  +L G +IC   G+TTEL L D+F+A+ +    I F  V+
Sbjct: 119 TYYDGQGVLVRK--GTIASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA++ D   L AL+     P +HVIL D +SK PL  A+ +GD  W+++
Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A+  AEELG+T KNI + +K TTNP+V RF+G +   ++G+ LGL  DW Y+I+
Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKE--GSLGKVLGLNGDWAYQIV 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +G+Y E+FDRN+G  S L + RG NA W  GGL Y PP R
Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336


>gi|311108222|ref|YP_003981075.1| general L-amino acid-binding periplasmic protein AapJ 1
           [Achromobacter xylosoxidans A8]
 gi|310762911|gb|ADP18360.1| general L-amino acid-binding periplasmic protein AapJ 1
           [Achromobacter xylosoxidans A8]
          Length = 340

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 146/343 (42%), Positives = 228/343 (66%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +   L +   +  +     L  +KK+GF++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRSILFAASALALACASQAAVAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP+K +  PL+ ++RF ALQS ++D+L R    T  R+ SLGLA   
Sbjct: 61  VDICRAVAAAVFGDPTKFKGTPLSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG +++KK G+ S  +L+GA++CVQ GTTTEL LAD+F+ +N+++ P+V ++V 
Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRTNNIEFKPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P ++ ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQKN++++ K + NP++ R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALMEAEEYGITQKNVDEMLK-SNNPNIARILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G  S+L + RG NALW+KGG MY  PIR
Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWNKGGAMYPWPIR 340


>gi|114766874|ref|ZP_01445796.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114540920|gb|EAU43980.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           HTCC2601]
          Length = 339

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 146/343 (42%), Positives = 214/343 (62%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L +    + + +A+ L D+K RG L CG++TGL GF+   ANG W+GFD
Sbjct: 1   MKNTVILG--ALTVAGLAAGAASAATLDDVKARGNLNCGVSTGLTGFSAPDANGVWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++    + RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAVCRAVAAAVLGDPMAVEFVSTTGQTRFTALASGEIDMLARNTTWTFSRDNDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRVNNINYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P +HVILP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFETPGDHVILPEIISKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
             WT  A++ AEE G+T  NI ++S   T+ P++ R LG +    +G  +GL  DW  + 
Sbjct: 239 ARWTLNALIAAEEYGVTSANIEELSSAPTDNPEINRLLGTE--GELGAMIGLEADWAKKA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++ +G  + + + RG NA W++GGLMY+PP R
Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLMYSPPFR 339


>gi|315499877|ref|YP_004088680.1| extracellular solute-binding protein family 3 [Asticcacaulis
           excentricus CB 48]
 gi|315417889|gb|ADU14529.1| extracellular solute-binding protein family 3 [Asticcacaulis
           excentricus CB 48]
          Length = 370

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 146/330 (44%), Positives = 220/330 (66%), Gaps = 4/330 (1%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
              T   ++++ L  +  RG + CG++ GL+GF+    +G W+GFDVDFCRAL++AIF D
Sbjct: 43  ATLTPTQSDSATLKAVLARGRVSCGVHPGLIGFSYKDNSGRWRGFDVDFCRALAAAIFSD 102

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K+ Y+PL   ERF AL++ ++D+L R+T WTL R+ +  + +  I Y+DGQGF++ K 
Sbjct: 103 ADKVTYVPLTTTERFEALKTGKVDVLWRSTSWTLSRDAADQVDYAGINYYDGQGFLVRKS 162

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             ++S ++L+GA ICVQ G+T+EL LAD+F+A  +KY+P+V +  +E   AY A +CDA 
Sbjct: 163 LRLNSATELNGARICVQTGSTSELNLADFFRARGLKYNPVVVKNEDEGRDAYAAGQCDAL 222

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           + D+SAL A + T   P+ H ILP+IISK PL P + QGD +W +IV WT Y  + AEEL
Sbjct: 223 SSDVSALAAARATLSDPTAHTILPEIISKEPLGPVVRQGDDQWTDIVRWTLYVTIVAEEL 282

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           G++ + +     ++ NP+V+R LG + +   G  L    +W Y I+  +GNYGE+FDRN+
Sbjct: 283 GVSSETVKAQQLESQNPEVRRLLGSEGNLGGGLGL--GPEWAYNILSQVGNYGEIFDRNI 340

Query: 315 GNQSELKIPRGYNALWS--KGGLMYAPPIR 342
           G  S LK+ RG NA W+  + GL+Y+PP+R
Sbjct: 341 GADSPLKLSRGLNAQWNAPERGLLYSPPVR 370


>gi|158422580|ref|YP_001523872.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158329469|dbj|BAF86954.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 336

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 156/342 (45%), Positives = 226/342 (66%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++    + FT+ +  A  L  +K RG L CG++TG+ GF+  + +G W GFD
Sbjct: 1   MK--TLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFS-QQVDGKWSGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++A+ +DP+K+ ++PLNA++RF AL   ++D+LSRNT WTL RE      F  
Sbjct: 58  VDFCRAVAAAVLNDPAKVNFVPLNAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGA 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++   + I S  +L G+ +CVQ GTT      DYFK +NMK   +    V+
Sbjct: 118 VTYFDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDYFKTNNMKLELVTLPTVQ 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  AY    C+  + D+SALYAL+    +P+ H++LPD+I+K PL P + QGD EW+N+
Sbjct: 178 DLVKAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNV 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WTHY M+  EELG++  ++++  K +  PDV+R +G D   + G  LGLTKD+  RII
Sbjct: 238 VKWTHYVMINGEELGVSSLSLDEALK-SQKPDVKRLVGTD--GDFGTELGLTKDFAVRII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE F+RN+G  S+L IPRG N LWS GG+ YAPP+R
Sbjct: 295 RAVGNYGEAFERNIGTGSKLAIPRGVNQLWSAGGIQYAPPVR 336


>gi|317403931|gb|EFV84400.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 338

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 146/326 (44%), Positives = 218/326 (66%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T  +     L  +KKRG+++CG++TG+ GF+   + G+W+G DVD CRA+++ IF+D S
Sbjct: 16  VTGLAHAGPTLDTVKKRGYVQCGVSTGIQGFSSPDSKGNWQGLDVDMCRAIAATIFNDAS 75

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K +  PL  + RF ALQS ++D+L+RN   T+ R+ +LGL    + Y+D QG ++  + G
Sbjct: 76  KFRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLISTGVNYYDSQGVMVSARLG 135

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +  + +L GA+ICVQ GT TEL LAD+F+A+ +K+ P+V ++ +EI  A+ A RCDA+T 
Sbjct: 136 VRKLKELDGATICVQPGTVTELDLADWFRANGLKFKPVVIDKYDEIVRAFSAGRCDAFTS 195

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A + T + P  +VIL + I+KSPL P + QGD  W+N+V WT  AM+ AEE G+
Sbjct: 196 DKSQLAASRTTLEHPDNYVILDENIAKSPLGPMVRQGDDNWFNVVRWTLNAMLEAEEFGV 255

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T  N++   K +TNP+VQR LG+  +  +G+ LG+   W Y I++ +GNYGE ++RNLG 
Sbjct: 256 TSANVDSQLK-STNPNVQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESYERNLGM 312

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            S +K+PRG NA W  GG MY  P+R
Sbjct: 313 ASAMKLPRGLNAQWRDGGQMYGWPVR 338


>gi|33596740|ref|NP_884383.1| ABC transporter substrate-binding protein [Bordetella parapertussis
           12822]
 gi|33573441|emb|CAE37426.1| Putative ABC transport system, substrate-binding protein
           [Bordetella parapertussis]
          Length = 336

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 198/342 (57%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  I    T+   +A  L D+K RG L C   TG  GF+     G   G +
Sbjct: 1   MKKTLTSPLVAAIA--HTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP + + + LN  +RF ALQS ++DIL   T WTL RE +  L    
Sbjct: 59  VDVCRAIATAVFGDPERHKIVVLNPIQRFTALQSGEVDILFNTTTWTLSREGAGALYAGV 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +      I+S  +L G +IC   G+TTEL L D+F+A+ +    I F  V+
Sbjct: 119 TYYDGQGVLVRK--GTIASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA++ D   L AL+     P +HVIL D +SK PL  A+ +GD  W+++
Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A+  AEELG+T KNI + +K TTNP+V RF+G +   ++G+ LGL  DW Y+I+
Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKE--GSLGKVLGLNGDWAYQIV 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +G+Y E+FDRN+G  S L + RG NA W  GGL Y PP R
Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336


>gi|92119138|ref|YP_578867.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14]
 gi|91802032|gb|ABE64407.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 345

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 169/341 (49%), Positives = 233/341 (68%), Gaps = 6/341 (1%)

Query: 5   FFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             + +     +   + +    +   L    +R  + CG+NTGL GF+ V   G+W GFDV
Sbjct: 8   LLIGLAIATAIAVMAVTYERYDTKTLKRTLRRDAVLCGVNTGLPGFSNVDEKGNWSGFDV 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DFCRA+++AIFDDP+K++++PL A ERF  LQS+++DIL+RN+ W++ RE +  L F  +
Sbjct: 68  DFCRAVAAAIFDDPAKVKFVPLAADERFKELQSRKVDILARNSTWSMSRETNFDLYFPAV 127

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DG+GF++   +  +S   L G  ICVQ GTTT+L LADYFKA+N+ Y  I F ++E+
Sbjct: 128 AYYDGEGFMVRTSRKAASALDLGGTKICVQDGTTTKLNLADYFKANNLTYEEIKFGKLED 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  AY   +CD  T D++ LYA++L   +PSE  ILPD+ISK PLAP + Q D +W  IV
Sbjct: 188 MLKAYDEAKCDVVTSDVAQLYAMRLRLTKPSESFILPDVISKEPLAPVVRQRDDDWMMIV 247

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT YAMV AEELG+T KNI++  K +  PDV R +G +     GEALGLTKDW  RIIR
Sbjct: 248 KWTLYAMVNAEELGVTSKNIDEAMK-SKKPDVMRLVGTE--GAYGEALGLTKDWAARIIR 304

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           H+GNYGE++DRN+G  S+LKIPRG N LW+ GG+MYAPP+R
Sbjct: 305 HVGNYGEVYDRNVGADSKLKIPRGLNQLWNAGGIMYAPPLR 345


>gi|319940740|ref|ZP_08015081.1| extracellular solute-binding protein, family 3 [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805800|gb|EFW02574.1| extracellular solute-binding protein, family 3 [Sutterella
           wadsworthensis 3_1_45B]
          Length = 340

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 144/342 (42%), Positives = 217/342 (63%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +        S +   ++L  I+    L CG+NT   GF+   + G W+G D
Sbjct: 1   MKTTLLSAAVVAAAATAASPAFAGAVLDKIRANDQLVCGVNTSAPGFSSADSKGHWEGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+ CR++++A+  +  K++Y+PL++ +   AL S QID+L+RNT WT+ R+ S G  F  
Sbjct: 61  VNLCRSVAAAVLGNADKVKYVPLSSTQHMTALASGQIDMLARNTTWTMTRDASHGNVFVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQ F++ K  G+ S+ +L GA++CVQ GTTTE T ADYF++H M+Y  +VF+  E
Sbjct: 121 VSYYDGQAFMVPKSLGVKSLKELDGATVCVQTGTTTEKTTADYFRSHGMQYKTVVFDTTE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + RCDAYT D+S L  ++     PS+  ILP+ I+K PL PA+ +GD E++ I
Sbjct: 181 ATQGAFLSGRCDAYTSDMSDLAGVRTVAQDPSKFDILPETITKEPLGPAVRRGDWEFFEI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A + AEELG+TQ N++ + K + +P+V R +G     ++G  LGL KDW+YRII
Sbjct: 241 VRWSFMAFLNAEELGVTQANVDDMRKTSKDPNVMRLVGT--GEDMGRMLGLDKDWSYRII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE + +  G  S L +PRG N LW+ GGLMYA PIR
Sbjct: 299 KQVGNYGESWTKYFGPTSPLNLPRGMNKLWTDGGLMYAMPIR 340


>gi|311108521|ref|YP_003981374.1| general L-amino acid-binding periplasmic protein AapJ 2
           [Achromobacter xylosoxidans A8]
 gi|310763210|gb|ADP18659.1| general L-amino acid-binding periplasmic protein AapJ 2
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  322 bits (825), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++  + +I  L +   +S +     L  ++KRG+L+CG++TG+ GF+   + G W G D
Sbjct: 1   MHRRTY-AICALALAAVSSQAFAGPTLDTVRKRGYLQCGVSTGIQGFSAPDSKGTWHGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++ +F+D +K +  PL  + RF ALQS ++D+L+RN   T+ R+ +LGL    
Sbjct: 60  VDMCRAIAATVFNDATKYRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLLSVA 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+D QG ++  K G+  + +L GA++CVQ GT TEL LAD+F++ ++++ P+V E+ +
Sbjct: 120 VNYYDSQGVMVSDKLGVKKLRELDGATVCVQPGTVTELDLADWFRSQSLRFKPVVIEKYD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EI  A+ A RCDA+T D S L A ++T + P  +VIL + ISKSPL P + QGD  W NI
Sbjct: 180 EIVRAFSAGRCDAFTSDKSQLAASRMTLENPESYVILDENISKSPLGPMVRQGDDNWINI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  AM+ AEE GIT  N++   K  + P+VQR LG+  +  +G  +G+   W Y I+
Sbjct: 240 VRWSLNAMLEAEEFGITSSNVDAQLKANS-PNVQRILGV--TPGMGRNMGVDDKWAYNIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE ++RNLG  S +K+PR  NA W  GGLMY  P+R
Sbjct: 297 KQVGNYGESYERNLGMSSPMKLPRALNAQWRDGGLMYGWPVR 338


>gi|75677073|ref|YP_319494.1| extracellular solute-binding protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74421943|gb|ABA06142.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 345

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 168/320 (52%), Positives = 226/320 (70%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +R  + CG+NTGL GF+     G+W GFDVDFCRA+++AIFDDPSK++++P
Sbjct: 29  DTKTLKRTLRRDAVLCGVNTGLPGFSSSDEKGNWSGFDVDFCRAVAAAIFDDPSKVKFVP 88

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L A ERF  LQS+++DIL+RN+ W++ RE +  L F  + Y+DG+GF++   +   S   
Sbjct: 89  LAADERFKELQSRKVDILARNSTWSMSRETNFNLYFPAVAYYDGEGFMVRTSRKADSALD 148

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L    ICVQ+ TTT+L LADYF+A+N+KY  I FE++E++  AY   RCD  T D+S LY
Sbjct: 149 LGDTKICVQSATTTQLNLADYFRANNLKYEEIRFEKLEDVLRAYDEARCDVVTADVSQLY 208

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           AL+L   +P+E  ILPD+ISK PLAP + Q D +W  I+ WT YAM+ AEELG+T KNI+
Sbjct: 209 ALRLRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMIIKWTLYAMINAEELGVTSKNID 268

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K T  PDV R +G +     GEALGLTKDW  RIIRH+GNYGE++DRN+G +S LKI
Sbjct: 269 EAMKSTK-PDVMRLVGTE--GQYGEALGLTKDWAARIIRHVGNYGEVYDRNIGTESRLKI 325

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N  W+ GG+MYAPP+R
Sbjct: 326 PRGLNQPWNAGGIMYAPPLR 345


>gi|293607066|ref|ZP_06689409.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814556|gb|EFF73694.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 340

 Score =  322 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 146/343 (42%), Positives = 226/343 (65%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +   L +   +  +     L  +KK+GF++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRSTLFAAGALALACASQAAIAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DPSK +   L+ ++RF ALQS ++D+L R    T  R+ SLGL+   
Sbjct: 61  VDICRAVAAAVFGDPSKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG +++KK G+ S  +L+GA++CVQ GTTTEL LAD+F+A+ +++ P+V ++V 
Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANKIEFKPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P ++ ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQKN++++ K + NP+V R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G  S+L + RG NALWS GG MY  PIR
Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLARGTNALWSNGGAMYPWPIR 340


>gi|227327916|ref|ZP_03831940.1| general L-amino ABC transporter binding protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 305

 Score =  321 bits (823), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 152/305 (49%), Positives = 216/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR L++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADASGKYSGIDVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+ F  +TY+DG GF+ H K G++S  +L GA++C+QAGT TE
Sbjct: 63  DVLSRNTTWTSSRDGGMGMLFTGVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFK H M+Y P+ F+R +E   A  + RCD    D S LYAL++   +P+E ++L
Sbjct: 123 LNVADYFKTHKMQYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW+ IV WT +AM+ AEE+G+T KN++Q++   T PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDEEWFAIVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L  DW ++II+ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ Y
Sbjct: 243 GHE--GSYGKDLKLPNDWAFKIIKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQY 300

Query: 338 APPIR 342
           AP +R
Sbjct: 301 APAVR 305


>gi|297567745|ref|YP_003686716.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946]
 gi|296852194|gb|ADH65208.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946]
          Length = 345

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 140/349 (40%), Positives = 215/349 (61%), Gaps = 11/349 (3%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56
           M K +    + +  +  +         S L  +K RG L CG+N  L GF  +    G  
Sbjct: 1   MIKAWRKPLLLVAVVAYVLTGMGLAQQSRLDVVKGRGKLVCGVNARLPGFGFLDEKTGKA 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVDFCRA+++A+FDDP K++Y+PL+A+ RF A+Q+ ++D+  RNT  T  R+ ++G+
Sbjct: 61  TGFDVDFCRAVAAALFDDPEKVEYVPLDARVRFQAVQNGEVDVAFRNTTVTSSRDGAVGV 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIV 175
            F P+T++DGQG ++ K    SS+ +L GA+ C   GTT E  ++DY ++   +    + 
Sbjct: 121 DFLPVTFYDGQGVMVKKG-KASSLRELEGATFCTTQGTTNEKNISDYIRSRRWRNTRLLT 179

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE  +++ AA    RCDA+T D S L   + T   P + +IL + ISK PLA  + + D+
Sbjct: 180 FEDGQKVFAALLEGRCDAFTADKSQLVGYRGTASNPDDLLILRETISKEPLAGMVRENDS 239

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
            W + ++W  YA + AEE GIT KN++Q +K +  P+V+RFLG++    +G+ LGL  D+
Sbjct: 240 RWRDALTWIVYATIQAEEFGITVKNLDQQTK-SDVPEVRRFLGLE--GTLGKDLGLPPDF 296

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRG--YNALWSKGGLMYAPPIR 342
             RI+RH+GNYGE++DR  G +S   IPR    NAL++KGGL+Y+PP R
Sbjct: 297 AVRIVRHVGNYGEIYDRYFGPKSAFAIPRAGTLNALYNKGGLLYSPPFR 345


>gi|220914746|ref|YP_002490054.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
 gi|219952497|gb|ACL62887.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 341

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 137/347 (39%), Positives = 224/347 (64%), Gaps = 11/347 (3%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +    +IL   +  F     +  + +  + DI+ RG L CG+  G  GF+   + G  
Sbjct: 1   MNRVLAGAILFGALAAFADPSWAQGSGSKTIDDIRARGQLVCGVTAGAAGFSLPDSRGVM 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D D CRA+++A   +  K++Y+P     RF ALQS +IDIL R+T WTL RE +LGL
Sbjct: 61  RGIDADICRAVAAATLGEADKVRYVPTTVTNRFTALQSGEIDILVRSTTWTLSREANLGL 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  + +FDG GF+++K  G+ S  +L+GA+IC+Q GT+TEL +ADYF+ H MK+ PI+ 
Sbjct: 121 EFAGVYFFDGTGFMVNKSLGVKSSKELNGATICIQPGTSTELAVADYFREHGMKFKPILI 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDT 235
           +   E    + + RCDAY+ DISAL + +     +  ++V+LP++ISK P+   + +GD 
Sbjct: 181 QDPAETQNTFISGRCDAYSMDISALASFRFQQGPKKDDYVLLPEVISKEPVGVMVRKGDE 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           +++++V W+  A++  EE G+TQ N++Q+  D+ +P ++R LG++   ++G+A+G+   W
Sbjct: 241 KFFDLVRWSMIALLQGEESGVTQANVDQML-DSKDPTIRRMLGLE--GDLGKAMGVDNKW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            Y+I++ +GN+GE+++RN+   + L I RG NALW+KGGL Y PP+R
Sbjct: 298 AYKILKSVGNFGEIWERNI---APLGISRGINALWTKGGLHYPPPMR 341


>gi|317405707|gb|EFV86003.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 338

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 144/340 (42%), Positives = 222/340 (65%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K          +L  +  ++       +K +GF++CG++TG+ GF+   + G W G DVD
Sbjct: 2   KALTTVAAGAALLLSSWGASAGVTFESVKNKGFVQCGVSTGVAGFSVNDSKGGWMGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRAL+  +F D SK + + ++A +RF ALQS ++D+L RNT  +L R+ +LGL    + 
Sbjct: 62  LCRALAVTMFGDASKAKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG +++K   + S  +L GA++CVQ GTTTEL L+D+F++ N+ + P+V ER++EI
Sbjct: 122 YYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLSDWFRSQNIAFKPVVVERLDEI 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A+   RCDA+TGD S L A +   + P ++ ILP+  SK PL P + QGD +W+N+V 
Sbjct: 182 IRAFAVGRCDAFTGDKSQLAAARTNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +AM+ AEE G+T KN++++ K +TNP+VQR LG+  +  +G+ LG+   W Y +I+ 
Sbjct: 242 WTMFAMLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNVIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F++NLG  S +K+ RG NA +  GGLMY  P+R
Sbjct: 299 IGNYGESFEKNLGATSPMKLSRGLNASYRNGGLMYGWPVR 338


>gi|253690349|ref|YP_003019539.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756927|gb|ACT15003.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 350

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 134/326 (41%), Positives = 204/326 (62%), Gaps = 4/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + N   L  IK RG L CG++    GF+ + + G W G DVD+CRAL++A+F D +K
Sbjct: 28  AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAVFGDANK 87

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++  L+  +RF A+QS ++D+LSRN    L R+ SLGL F P T++ G GF++     +
Sbjct: 88  VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             V  L GA++C+  G++TE  +A  F + N+ Y P+V E  +E  AAY + RCD    D
Sbjct: 148 KKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207

Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
             AL  ++    ++PS+HVILP I SK PLA A+ QGD +WY+IV W  YA   AEE+ I
Sbjct: 208 KVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
            Q+N++   K +T+PD+Q  LG+  + + G+ LGL+  W Y +I+ +GNY ++++R+ G 
Sbjct: 268 GQQNVDSKLK-STDPDIQALLGV--TGDYGQKLGLSNQWAYNVIKQVGNYSDIYNRHFGP 324

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            +   + R  N LW+KGGL+Y  PIR
Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350


>gi|85714820|ref|ZP_01045806.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
 gi|85698306|gb|EAQ36177.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
          Length = 345

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 162/341 (47%), Positives = 228/341 (66%), Gaps = 6/341 (1%)

Query: 5   FFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             + +     +   + +    +   L    +R  + CG+N G+ GF+     G+W GFDV
Sbjct: 8   LLIGLAIATAIAVMAITYERYDTKTLKRTLRRDAVLCGVNAGVPGFSNSDEKGNWSGFDV 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DFCRA+++AIFDDP+K++++PL + ERF  LQS+++DIL+RN+ W++ RE +  L F  +
Sbjct: 68  DFCRAVAAAIFDDPAKVKFVPLESDERFKELQSRKVDILARNSTWSMSRETNYNLYFPAV 127

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DG+GF++   +   S   L    ICVQ  TTT+L LADYFKA+N+KY  I F ++E+
Sbjct: 128 AYYDGEGFMVRTSRKADSALDLGDTKICVQDSTTTKLNLADYFKANNLKYEEIKFGKLED 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  AY   +CD  T D+S LYAL+L   +P+E  ILPD+ISK PLAP + Q D +W  I+
Sbjct: 188 MLRAYDEAKCDVLTADVSHLYALRLRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMII 247

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT YAM+ AEELG+T KNI++  K +  PDV R +G D     GE LGLTKDW  RI+R
Sbjct: 248 KWTLYAMINAEELGVTSKNIDEAMK-SKKPDVMRLVGTD--GQYGEGLGLTKDWAARIVR 304

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           H+GNYGE++DRN+G+ S LKIPRG N LW+ GG+MYAPP+R
Sbjct: 305 HVGNYGEVYDRNIGSDSRLKIPRGLNQLWNAGGIMYAPPLR 345


>gi|296387623|ref|ZP_06877098.1| putative amino acid-binding protein [Pseudomonas aeruginosa PAb1]
          Length = 305

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 150/305 (49%), Positives = 217/305 (71%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CG++ GL GF+   A G +KG DVD CRAL++A+F D  K+++ PL+A ERF ALQS  +
Sbjct: 3   CGVSDGLPGFSYADAKGRFKGLDVDICRALAAALFGDAEKVRFTPLSATERFSALQSGTV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+ +LG+ F  +TYFDGQGF++++K G+SS  +L   ++C+Q+GTT E
Sbjct: 63  DLLSRNTSWTSSRDTALGIHFTGVTYFDGQGFLVNRKLGVSSARELKDTTVCIQSGTTNE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYF+AH ++Y  ++ +  E+   A  A +CD  + D S LYA +L   +P ++V+L
Sbjct: 123 LNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL PA+ QGD  W+NIV WT Y ++ AEELG+T  N+ + ++D+ NPDV R L
Sbjct: 183 PEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L +DW  +++R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL Y
Sbjct: 243 GSE--GDAGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHY 300

Query: 338 APPIR 342
           APPIR
Sbjct: 301 APPIR 305


>gi|317970283|ref|ZP_07971673.1| extracellular solute-binding protein [Synechococcus sp. CB0205]
          Length = 354

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 135/351 (38%), Positives = 206/351 (58%), Gaps = 13/351 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++  L  L  T  +   S      L  +K RG L CG++  L GF+ V  +G ++
Sbjct: 6   RKVLRALPLLAGLVLTGCAVEGSGPQSQKLAAVKARGQLVCGVDGKLPGFSFVAPDGRYQ 65

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL- 116
           GF+VD CRA+++ +  DP+K+++  L+A ERF A+ S ++D+LSR+T  TL R+ + G  
Sbjct: 66  GFEVDLCRAVAAGVLSDPAKVEFRDLSASERFAAVNSGEVDLLSRSTTMTLSRDAAGGNA 125

Query: 117 -AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +F PI ++ GQ  +++   GI+ + QL+G  ICV  GTTTEL LAD  +  N  Y P+ 
Sbjct: 126 LSFAPIHFYGGQAVMVNAGSGITYLKQLAGKPICVTTGTTTELNLADRMRELNAAYMPLK 185

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   AY   RC A T D + L A + +   P  HV+L   +SK PLA   + GD 
Sbjct: 186 FQNDGQTYGAYLQGRCVAVTSDRALLAAKRSSFPDPKAHVLLAGDLSKEPLAMGTVNGDP 245

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
            W + V W  YA++ AEE GITQ N+     +   D+   D++RFLG+D    +G+ LGL
Sbjct: 246 AWADAVRWIAYALMQAEESGITQANVEAKLAEAQADSNQADLRRFLGVD--GQLGQQLGL 303

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             D+  ++I+ +GNYGE+F+RNLG  + + + RG N  W+ GGL+Y+PP R
Sbjct: 304 PADFVVQVIKAVGNYGEIFERNLGVNTRINLERGTNRQWTDGGLIYSPPFR 354


>gi|39935694|ref|NP_947970.1| polar amino acid ABC transport substrate-binding protein AapJ-2
           [Rhodopseudomonas palustris CGA009]
 gi|39649547|emb|CAE28069.1| polar amino acid ABC transport substrate-binding protein, aapJ-2
           [Rhodopseudomonas palustris CGA009]
          Length = 340

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 141/319 (44%), Positives = 197/319 (61%), Gaps = 7/319 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK RG +K G+     G+    +NG W+GF VDF RAL+  +F DP K+Q+   
Sbjct: 29  GPTLDRIKSRGVIKVGV-GTTPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + ++R  ALQS + D+L      T+ R   LG  F P  ++DGQG ++ K  G++S SQL
Sbjct: 88  SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA+I +Q+GTT EL +ADYF+ H  K+ P+  E   E  AA  + R D  T D S L A
Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +    +PS++VILP+ +SK PLAPA+  GD  W  IV+WT  A + AEE GIT KN++ 
Sbjct: 208 KQTQLKKPSDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
             K + +P ++RFLG+D S  + E++GL   W Y II+ +GNYGE+FDR+L     L   
Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RGYN LW++GGL+Y+PP R
Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340


>gi|299134008|ref|ZP_07027201.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
 gi|298590755|gb|EFI50957.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
          Length = 350

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 161/333 (48%), Positives = 224/333 (67%), Gaps = 3/333 (0%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +  +  F      +   L    KRG + CG+N GL GFA   ANG+W GFDVD CRA+++
Sbjct: 21  IVAVGAFTALDRYDTQTLKRTVKRGAVNCGVNAGLPGFANKDANGNWSGFDVDICRAVAA 80

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+FDD +K+ ++PL+  +RF  LQ++++DILSRN+ W++ RE+   L F  ++Y+DG+GF
Sbjct: 81  AVFDDATKVNFIPLDTNQRFKELQNRKVDILSRNSTWSMSREVDYDLTFAAVSYYDGEGF 140

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ + + + S  +L G  +CVQ+ TTT+L LADYFK +N+ Y  + F  V ++  AY A 
Sbjct: 141 MVRRSRNVDSALELGGTRVCVQSDTTTQLNLADYFKVNNITYDEMKFGNVSDMLKAYEAG 200

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           +CD  T D S LYA +    +P +HVIL DIISK PLAP + Q D +W  IV W  YAM+
Sbjct: 201 KCDVLTTDTSQLYAYRQNLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAML 260

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEELG+T KNI++  K +  PDV R +G +   N GE LGLTKDW  RIIRH+GNYGE+
Sbjct: 261 NAEELGVTSKNIDEALK-SKKPDVMRLVGTE--GNYGEELGLTKDWAARIIRHVGNYGEV 317

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++RN+G  S+L IPRG N LW+ GG+ YAPPIR
Sbjct: 318 YERNVGLGSKLGIPRGLNQLWNAGGIQYAPPIR 350


>gi|192291277|ref|YP_001991882.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
 gi|192285026|gb|ACF01407.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
          Length = 340

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 140/319 (43%), Positives = 196/319 (61%), Gaps = 7/319 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK RG +K G+     G+    +NG W+GF VDF RAL+  +F DP K+Q+   
Sbjct: 29  GPTLDRIKSRGVIKVGV-GTTPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + ++R  ALQS + D+L      T+ R   LG  F P  ++DGQG ++ K  G++S SQL
Sbjct: 88  SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA+I +Q+GTT EL +ADYF+ H  K+ P+  E   E  AA  + R D  T D S L A
Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +    +P ++VILP+ +SK PLAPA+  GD  W  IV+WT  A + AEE GIT KN++ 
Sbjct: 208 KQTQLKKPGDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
             K + +P ++RFLG+D S  + E++GL   W Y II+ +GNYGE+FDR+L     L   
Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RGYN LW++GGL+Y+PP R
Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340


>gi|254424681|ref|ZP_05038399.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335]
 gi|196192170|gb|EDX87134.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335]
          Length = 350

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 209/324 (64%), Gaps = 3/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  ++ S L  +  RG L CG++ G+ GF+ V+A G + G DVD C+A+++A+FDDP ++
Sbjct: 30  AVGSSGSRLQTVLDRGELICGVDGGIPGFSFVEA-GAYSGLDVDVCKAVAAALFDDPEQV 88

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y  L++ ERF AL+  ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ +  GI+
Sbjct: 89  VYRNLDSTERFEALKGGEVDMLSRNTTWTLSRDTSVGMEFGPTTFYDGQGMLVREADGIA 148

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            +S   G S+CV+AGTTTEL LAD  +   + + P  F+  +   AAY A  C+  T D 
Sbjct: 149 ELSDFEGRSVCVEAGTTTELNLADQMRQLGVSFEPQTFQDADAAYAAYEAGSCEGMTSDK 208

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L A + T   P EHV+L   +SK PL P  I  D+ W++ V W  YA++  EELG+T 
Sbjct: 209 SQLIARRSTLTNPDEHVLLDVTMSKEPLGPLTINNDSAWFDTVKWVTYALIEGEELGLTS 268

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           +NI +    T +P ++RF G +    +G  +GL  D+  R I+H+GNYGE+++RNLG  S
Sbjct: 269 ENIEETVASTEDPTIRRFAGEE--GTLGSDMGLPNDFALRAIKHVGNYGEIYERNLGEGS 326

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
           +  + RG NALWS+GGL+Y+PP R
Sbjct: 327 QFALARGQNALWSEGGLLYSPPFR 350


>gi|296534477|ref|ZP_06896902.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296265196|gb|EFH11396.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 449

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 130/327 (39%), Positives = 206/327 (62%), Gaps = 2/327 (0%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                S+ +  L  ++ RG L CG++TG+ GFA   + G W+G DVD CR L++AIF+DP
Sbjct: 125 AAAQTSSASPTLEAVRARGQLVCGVHTGIAGFALPDSRGVWQGLDVDLCRGLAAAIFNDP 184

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K++ +P+++  RF AL S ++D+L R +  T+LR+ +LGL      +FDG GF++    
Sbjct: 185 AKLRLVPVSSSTRFTALGSGELDVLFRTSTQTMLRDTTLGLRHAVTYFFDGHGFMVRADS 244

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G+  V++L GA+IC+  GTT E   ADYF++ N  + P+VFER +++ AA +A RCDA+ 
Sbjct: 245 GVQRVAELRGATICLVQGTTNEQVTADYFRSINTPFQPVVFERTDQVAAALQAGRCDAFG 304

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S L A + +   P++  +LP+  SK P    + +GD  W++IV W   A++ AEE G
Sbjct: 305 TDASQLAATRASLPNPAQWSVLPERFSKEPYGAYVRRGDDNWFDIVRWYTTAIIEAEEQG 364

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           +T  N   +   + NP+ +R LG+  +  +G+AL L   W Y  IR +GNY E++DR++G
Sbjct: 365 VTAANAEAMRGSSANPNTRRLLGV--TPELGQALKLDPLWAYNAIRAVGNYAEIYDRHMG 422

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
             + + +PRG N  W++GGL+YA P+R
Sbjct: 423 PATPIGLPRGPNEQWTRGGLLYAWPMR 449


>gi|116749482|ref|YP_846169.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698546|gb|ABK17734.1| extracellular solute-binding protein, family 3 [Syntrophobacter
           fumaroxidans MPOB]
          Length = 347

 Score =  318 bits (815), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 125/339 (36%), Positives = 199/339 (58%), Gaps = 3/339 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               ++  ++LF  + ++    L  IK RG L+CG++ G+ GF+    +G W G DVDFC
Sbjct: 11  LVTLLIASVLLFPENVASAGDTLIRIKARGKLRCGVSDGIPGFSWKGPDGRWTGMDVDFC 70

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RAL++A+  DP K+ ++PL A  RF AL++ ++D+L+RNT WT+ RE  LG+ F  +  +
Sbjct: 71  RALAAAVLKDPEKVDFVPLTASRRFPALKAGELDVLARNTTWTMEREAVLGILFAGVLVY 130

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D QGF++    GI+ +SQL GA++CV  G++ E  +A  F A N  Y P+  E   +  A
Sbjct: 131 DTQGFLVPTSSGITELSQLDGATVCVVRGSSHEEHIAQTFGARNWTYQPLQVESSVQAMA 190

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A    +C A+T +   L   ++     P ++ +L + IS+ P+ P + +GD +W+ IV W
Sbjct: 191 ALNEGKCKAFTSESPQLKTARMNAPDGPDQYSLLKETISEEPMGPVVRRGDEDWFTIVRW 250

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
             + ++ AE+ G T  N+    + T +     +  +D    I ++LG+   W  R++  +
Sbjct: 251 VLFTLILAEDGGYTGANVRSRLEKTADFRAMSWKQLD--GLIAKSLGIDPGWRIRVVESV 308

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RNLG+QS L + RG N LW   GLMYAPP R
Sbjct: 309 GNYGEVFERNLGSQSTLNLERGPNKLWKDAGLMYAPPFR 347


>gi|261823404|ref|YP_003261510.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261607417|gb|ACX89903.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 350

 Score =  318 bits (815), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 137/326 (42%), Positives = 204/326 (62%), Gaps = 4/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + N   L  IK RG L CG++    GF+ + + G W G DVD+CRAL++AIF D SK
Sbjct: 28  AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFGDASK 87

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++  L+  +RF A+QS ++D+LSRN    L R+ SLGL F P T++ G GF++     +
Sbjct: 88  VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L GA++C+  G++TE  +A  F + N+ Y P+V E  +E  AAY + RCD    D
Sbjct: 148 KTVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207

Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
             AL  ++    ++P++HVILP I SK PLA A+ QGD +WY+IV W  YA   AEE+ I
Sbjct: 208 KVALPGVRTFDAEKPADHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
            Q+N++   K +T+PDVQ  LG   + + G+ LGL   W Y +I+ +GNYG++++R+ G 
Sbjct: 268 GQQNVDSKLK-STDPDVQALLGT--TGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHFGP 324

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            +   + R  N LW+KGGL+Y  PIR
Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350


>gi|126731767|ref|ZP_01747571.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula
           stellata E-37]
 gi|126707594|gb|EBA06656.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula
           stellata E-37]
          Length = 344

 Score =  318 bits (814), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 140/347 (40%), Positives = 210/347 (60%), Gaps = 8/347 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K F      ++I      +     +   L  IK RG L CG++    GFA   + G+W
Sbjct: 1   MTKIFKSLSTGMLIGAAALATAAQAESGDTLASIKSRGELLCGVHPARHGFAAPDSQGNW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G +VD+C AL++A+F D  K++++ L++++RF A+QS ++D+L RN   TL R+ +LGL
Sbjct: 61  AGLEVDYCHALAAAVFGDADKVRFVALSSQQRFPAIQSGEVDVLVRNVTATLGRDTALGL 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P  ++ G GF++H   G+ +V  L GA+ICV  G+TTE  +A  F +  M+Y P+V 
Sbjct: 121 NFAPPIFYTGTGFLVHAGSGVETVEDLDGATICVAPGSTTERNVAQIFASRGMEYTPVVI 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E  +++  AY   RCDA T D +AL  ++      P EHV+LP I SK PLAPA+ QGD 
Sbjct: 181 ENNKQLVDAYVTGRCDALTKDKAALPGVRAYDTTDPKEHVLLPGIFSKEPLAPAVRQGDD 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           +WY+IV W  YA   AEELG+T +N  ++  ++ + DV   LG   + + G  LGLT+DW
Sbjct: 241 QWYDIVKWVVYATFNAEELGVTSENAEEMR-NSDDVDVMSLLGT--TGDYGSKLGLTEDW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            Y +I  +GNYGE++DR+ G  S +++ R  N  W+ GGL+Y  PI+
Sbjct: 298 AYDVITQVGNYGEIYDRHFGPDSPVQLDRDLNKQWTDGGLLYGFPIK 344


>gi|160899043|ref|YP_001564625.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160364627|gb|ABX36240.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 345

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 153/319 (47%), Positives = 220/319 (68%), Gaps = 3/319 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK+RG + CG++TG  GFA    +G+W G DVD CRA+++A   D SK++++P 
Sbjct: 28  GKTLDGIKQRGAVACGVHTGRAGFALADGSGNWSGLDVDLCRAVAAATLGDASKVKFIPT 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + + R  ALQS +ID+L+RNT WT  R+  LGL +  I + DGQGF+  KK G++SV QL
Sbjct: 88  SGQTRITALQSGEIDLLARNTTWTFTRDNGLGLMWAGINFHDGQGFMARKKPGLNSVKQL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           SGA+ICV +G+TTE TL++YF+AH + Y  +VF+  E    A+ + RC AYTGD+ AL  
Sbjct: 148 SGATICVISGSTTEKTLSEYFRAHKLNYKAVVFDNPEAALQAFSSGRCQAYTGDLGALAV 207

Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           L+      P ++VILP++ISK P  PA+ +GD EW+ +V WT  AM+ AEELGITQ N +
Sbjct: 208 LRGKELANPDDYVILPEVISKEPAGPAVRRGDDEWFAVVRWTLNAMIEAEELGITQANAD 267

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           ++   + +  V+RFLG     ++G+ LGL K+W  RI++ +GNYGE ++RNLG +S L +
Sbjct: 268 ELKTRSDSIQVKRFLGQSD--DLGKQLGLDKEWALRIVKAVGNYGESYERNLGAKSGLNV 325

Query: 323 PRGYNALWSKGGLMYAPPI 341
           PRG NAL++KGGLM +PP+
Sbjct: 326 PRGKNALFTKGGLMMSPPM 344


>gi|254466846|ref|ZP_05080257.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
 gi|206687754|gb|EDZ48236.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
          Length = 337

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 139/336 (41%), Positives = 211/336 (62%), Gaps = 4/336 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
              +    +   + S +A  L D++  G L CG++ G+ GF+   + G W G D D CRA
Sbjct: 6   TLAILATAVATMAASAHAGKLEDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRA 65

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +++A   D + ++++PL +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F  + Y+DG
Sbjct: 66  VAAATLGDANAVRFVPLASKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDG 125

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           QGF++    G++S  +L  A++C+  GTTTEL +AD+ +A+ +   P+VFE   E   AY
Sbjct: 126 QGFMVRADAGVTSAKELDAATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAY 185

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + RCDA T D S L A +     PS+H ILP+IISK PLAP +  GD +W ++V+W  Y
Sbjct: 186 ASGRCDALTTDASQLAAFRAGFANPSDHKILPEIISKEPLAPFVAHGDNQWKDVVTWVVY 245

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            ++TAEELG+TQ N+  ++  + NPDVQR LG   S + G  LGL+  W    I  +GNY
Sbjct: 246 GLITAEELGVTQANVADMAASSANPDVQRLLGA--SGDTGGLLGLSNTWMADAISAIGNY 303

Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GE+++RNL   + L + RG NALWS GG++YA P+R
Sbjct: 304 GEIYERNL--TATLGLERGVNALWSDGGILYAMPVR 337


>gi|269102822|ref|ZP_06155519.1| amino acid ABC transporter amino acid-binding protein
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162720|gb|EEZ41216.1| amino acid ABC transporter amino acid-binding protein
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 342

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 146/333 (43%), Positives = 220/333 (66%), Gaps = 3/333 (0%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L L+ L F+  S  +S L  +KKRG++KCG++TGL+GF+E    G W GFDV+FCRA+++
Sbjct: 13  LVLVALLFSYASVASSTLETVKKRGYIKCGVSTGLLGFSEPNQKGIWHGFDVEFCRAVAA 72

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+  D  +++++PL AKERF ALQ+  +D+L+RNT WTL R+ SL + F  ++Y+DGQGF
Sbjct: 73  AVLKDKGQVKFIPLTAKERFFALQNNDVDLLARNTSWTLHRDTSLNVLFTGVSYYDGQGF 132

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++     I+ +++LS   IC Q GTTTEL L++YF      +  I F+   ++  A+   
Sbjct: 133 LVKTSANINKITELSNPRICFQTGTTTELNLSEYFAQIKQPFQSIPFDAKPQLVTAFEDD 192

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RCD  + D + LY++K +   P    IL  +ISK PL P +   D++W+NIV WT + ++
Sbjct: 193 RCDVISSDKAGLYSIKQSLKDPLSAHILVSVISKEPLGPVVRDNDSQWFNIVKWTLFTLL 252

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEE  I+ +NI+ + KD++ P + RFL      N+ E L L  DW Y+II+ +GNYG++
Sbjct: 253 NAEENRISSENIDDL-KDSSIPHIARFLSTKD--NLSEGLQLPLDWRYQIIKQVGNYGQI 309

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++R LG+ S+LK+ RG NALW  GG+ YAPPIR
Sbjct: 310 YERTLGHSSKLKMERGLNALWIDGGIQYAPPIR 342


>gi|296537351|ref|ZP_06899216.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
 gi|296262324|gb|EFH09084.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
          Length = 344

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 152/318 (47%), Positives = 219/318 (68%), Gaps = 6/318 (1%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             +G I+ RG L CG+     GF+   + G  +G D D CRA+++AIF D SK++++   
Sbjct: 33  DTVGAIRARGALICGVTGTTAGFSLPDSQGVMRGIDADTCRAVAAAIFGDASKVRFVNTT 92

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           ++ RF ALQS ++D+L+RNT WTL RE SLG  F  I ++DGQGF++     ++S   L 
Sbjct: 93  SQNRFTALQSGEVDMLARNTTWTLSREASLGFEFASINFYDGQGFMVKTSLNVTSAKALD 152

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GA+ICVQ GTTTEL LADYF+ + M++ P+V E VEEI  A+ + RCDAYT D S+L A 
Sbjct: 153 GATICVQPGTTTELNLADYFRTNRMRFTPVVIESVEEIRTAFNSGRCDAYTNDASSLAAF 212

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           + T   P+E+++LP+IISK PL   + +GD ++++IV W H+A VTAEELGIT +N+   
Sbjct: 213 RATQANPAEYLLLPEIISKEPLGAVVRKGDWKFFDIVRWAHFAQVTAEELGITSQNLASF 272

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
             D+ NPDVQRF+G  KS ++G  LG+  DW  +I+R +GN+GE+++RN+   + L + R
Sbjct: 273 -ADSPNPDVQRFMG--KSGDLGRMLGVQADWAVQIVRQVGNFGEVWERNI---TPLGVQR 326

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW++GGL YAPP+R
Sbjct: 327 GINRLWTQGGLQYAPPMR 344


>gi|296535903|ref|ZP_06898057.1| amino-acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Roseomonas cervicalis ATCC
           49957]
 gi|296263760|gb|EFH10231.1| amino-acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Roseomonas cervicalis ATCC
           49957]
          Length = 325

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 144/317 (45%), Positives = 212/317 (66%), Gaps = 4/317 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++ +  L C  N G  GF    + G+ +G D D CRA+++A+    ++I++  L +
Sbjct: 13  TLAAVRAKALLDCSANQGSPGFGVPDSRGEQQGLDPDICRAVAAAVLGPNARIRWTVLTS 72

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R  ALQS Q+DI++R   WT  RE++ GL F    ++DGQGFI+ K  G++  +QL G
Sbjct: 73  ATRVTALQSGQVDIVARTFTWTHAREVNAGLQFASPVFYDGQGFIVPKASGVTRAAQLDG 132

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           ASICV AG+T EL LAD+ +++ ++ +P+VFE  E+   AY + RCDAYT D S L    
Sbjct: 133 ASICVTAGSTNELNLADWARSNGLRVNPVVFEGNEDTRKAYTSGRCDAYTLDASQLAGFA 192

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T  R  EHVIL DIISK PL+PA+ +GD +WY+IV WT +A++ AEE GITQ N++ + 
Sbjct: 193 TTLPRG-EHVILSDIISKEPLSPAVRKGDAQWYDIVRWTIFALILAEEHGITQANVDSML 251

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           + + NP+V+R LG+  + + G A+GL + W Y  I+ +GNYGE+F+R+LG +S L + RG
Sbjct: 252 E-SQNPEVRRLLGV--AGDHGPAMGLDRRWAYNAIKAVGNYGEIFERHLGAESPLGLERG 308

Query: 326 YNALWSKGGLMYAPPIR 342
            NALW++GGL+YAPP+R
Sbjct: 309 LNALWNRGGLLYAPPMR 325


>gi|317405314|gb|EFV85638.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans
           C54]
          Length = 341

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 140/321 (43%), Positives = 202/321 (62%), Gaps = 4/321 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               +  IKKRG L CG++ G  G +     G W G D D CRAL++A+  DP K +++P
Sbjct: 24  AGVTVDAIKKRGELVCGVSQGSAGLSIADKQGRWTGLDADLCRALAAAVLGDPEKTRFVP 83

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L++++RF ALQ  +ID+L+RNT  T  R+  LG+    I ++DGQGF++ KK G+ S ++
Sbjct: 84  LSSQQRFPALQGGEIDVLNRNTTITSSRDAGLGIVSAGIVFYDGQGFLVPKKLGVKSATE 143

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-AL 201
           L GA +CVQ GT  E  L DYFK H + Y P+V E + E++ A+ A RCD Y  D S   
Sbjct: 144 LDGAQVCVQPGTVNEQNLVDYFKKHKLNYRPVVIENLVELEQAFYAGRCDVYLSDASTLA 203

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            +       P + VILP+ I+KSPL P + Q D  W  IV WT  A+V AEELGIT +N+
Sbjct: 204 ASRAARAANPDDFVILPERINKSPLGPFVRQDDPNWTAIVRWTVNALVAAEELGITSRNV 263

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           +  ++ +++  V+R LG+D    IG+  GL + W   +IR +GNYGE++DRNLG  + LK
Sbjct: 264 DSQAQ-SSDAQVRRLLGLDP--GIGKGFGLDEGWARNVIRAVGNYGEVWDRNLGAATPLK 320

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG N  W++GGL+Y+PP +
Sbjct: 321 LDRGLNRQWNQGGLLYSPPFQ 341


>gi|33592620|ref|NP_880264.1| putative extracellular solute-binding protein [Bordetella pertussis
           Tohama I]
 gi|33595874|ref|NP_883517.1| putative extracellular solute-binding protein [Bordetella
           parapertussis 12822]
 gi|33600404|ref|NP_887964.1| putative extracellular solute-binding protein [Bordetella
           bronchiseptica RB50]
 gi|33565953|emb|CAE36503.1| putative extracellular solute-binding protein [Bordetella
           parapertussis]
 gi|33568003|emb|CAE31916.1| putative extracellular solute-binding protein [Bordetella
           bronchiseptica RB50]
 gi|33572266|emb|CAE41818.1| putative extracellular solute-binding protein [Bordetella pertussis
           Tohama I]
          Length = 340

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 143/343 (41%), Positives = 219/343 (63%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++   L +      +     L  +KK+GF++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRHIAMAAGALALALGAQAAHAGPTLDAVKKKGFVQCGLTDGVAGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D  K +   L+ ++RF ALQS ++D+L R    T  R+ SLGLA   
Sbjct: 61  VDICRAVAAAVFGDAGKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG ++ K  G+ S  +L  A+ICVQ GTTTEL LAD+F+A+ +K+ P+V ++V 
Sbjct: 121 ASFYDGQGVLVRKALGVKSAKELDEATICVQPGTTTELNLADWFRANGIKFTPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P +  ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDFEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQ+N++++ K + NP+V R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALMEAEEYGITQQNVDEMLK-SKNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY ++F+RN+G  S L + RG NALWS+GG MY  PIR
Sbjct: 298 IKAVGNYSQIFERNVGKDSRLGLQRGVNALWSQGGAMYPWPIR 340


>gi|83595863|gb|ABC25225.1| glutamate/glutamine/aspartate/asparagine-binding protein bztA
           precursor [uncultured marine bacterium Ant4D3]
          Length = 340

 Score =  314 bits (805), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 144/316 (45%), Positives = 204/316 (64%), Gaps = 3/316 (0%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            D++  G LKC + TGL GFA   ANG W+GFD DFCRA+++A+  D  K++++P   K 
Sbjct: 27  EDVRAAGELKCVVTTGLAGFAAPDANGRWEGFDADFCRAVAAAVLGDGDKVKFVPSTGKT 86

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           RF  L S + DIL RNT  TL R++ L L+F P+ ++DGQGF++    G++S   L GAS
Sbjct: 87  RFTMLNSGEGDILFRNTTETLSRDVDLKLSFLPVNFYDGQGFMVPAALGVTSAMDLDGAS 146

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C+Q GTTTEL LADYF+A+ M Y P+  E  EE    Y A RCD YT D S L + +  
Sbjct: 147 VCIQTGTTTELNLADYFRANGMSYEPVPIETNEEGFTNYVAGRCDVYTTDASGLASTRAK 206

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
            D P++HV+LP+IISK PL  A+  GD +W++I  W   A++ AEE+G+TQ N   ++ +
Sbjct: 207 FDDPTQHVVLPEIISKEPLGGAVRHGDDQWHDIGKWVVNALINAEEMGVTQANAMNLAAN 266

Query: 268 -TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
              NP + R +G +   ++G  LGL   W  R +   GNYGE+++RN+G  + L+I RG 
Sbjct: 267 VGKNPGINRLVGSE--GSMGAMLGLDAKWAARAVAQGGNYGEIYERNVGPNTPLEIARGL 324

Query: 327 NALWSKGGLMYAPPIR 342
           N LW+ GG++YA PIR
Sbjct: 325 NNLWNNGGVLYAAPIR 340


>gi|148655565|ref|YP_001275770.1| extracellular solute-binding protein [Roseiflexus sp. RS-1]
 gi|148567675|gb|ABQ89820.1| extracellular solute-binding protein, family 3 [Roseiflexus sp.
           RS-1]
          Length = 415

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 200/323 (61%), Gaps = 10/323 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84
           L  +K+RG+L CG N  L GF    +    W GFDVDFCRA+++AIF D +K++++ L  
Sbjct: 96  LARVKERGYLICGTNADLPGFGFYDSVRQTWSGFDVDFCRAVAAAIFGDATKVEFVALGT 155

Query: 85  ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                 RF A++  ++D+L RNT WTL R    GLAF P T+ DGQ F++  K  I+ + 
Sbjct: 156 GPGPNNRFDAVREGRVDVLFRNTTWTLGRN-ISGLAFGPTTFHDGQTFMVRAKDRITKLE 214

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  ICV  GTT+E  L D F A  +++   V +  +E+  AY    CDA T D S L
Sbjct: 215 DLEGKVICVAKGTTSEQNLNDDFAARGIRFTARVLDGEDELYPAYDEGECDAVTSDSSQL 274

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            A +     P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+
Sbjct: 275 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 334

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           +++   TT+P ++R LG++   N GE LGL  D+ Y+II+ +GNYG++++RNLG  + + 
Sbjct: 335 DRLRTSTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 392

Query: 322 IPRGYNALWS--KGGLMYAPPIR 342
           + RG N +W+   GG++ +PP R
Sbjct: 393 LDRGPNKVWNLGAGGVLASPPFR 415


>gi|113953701|ref|YP_730400.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Synechococcus sp. CC9311]
 gi|113881052|gb|ABI46010.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic
           amino acid-binding protein [Synechococcus sp. CC9311]
          Length = 381

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 135/352 (38%), Positives = 211/352 (59%), Gaps = 12/352 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M        L   +      +T     AS L  IK+R  L+CG++  + GF+ ++ +G +
Sbjct: 32  MRVHLLALPLVSFLFILNGCATLGEGGASRLDLIKRRAELRCGVSGKIPGFSFLRRDGSF 91

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--L 114
            G DVD CRA ++A+   P ++QY  L A ERF AL++ +ID+LSRNT + L R+     
Sbjct: 92  AGLDVDICRAFAAALTGSPDQVQYRSLTAPERFTALRTGEIDLLSRNTTFNLSRDAVGGN 151

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G++F P+ + DGQG ++ ++ G+S ++ L G +ICV +GTTTE  L D F+A  + Y PI
Sbjct: 152 GVSFAPVVFHDGQGLLVKRQSGVSDLNDLQGKTICVGSGTTTEQNLNDAFQARGIDYKPI 211

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++ + ++ A Y   RC A T D S L A +   + P +HVILP+++SK PLAP    GD
Sbjct: 212 KYQDLNQVIAGYLQGRCSAMTSDRSQLAAARSGFNNPEQHVILPEVLSKEPLAPLAAGGD 271

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI----NQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
               + + W  YA++ AEELGITQ+NI     +  +      ++RFLG++    +GE LG
Sbjct: 272 QRLADAMRWVIYALIAAEELGITQQNIGDKLEEAQRRPELTQLRRFLGVE--GELGEKLG 329

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           L  D+  ++I+ +GNYGE+++R+LG  S + IPRG N L+  GG++ +PP +
Sbjct: 330 LNNDFIVKVIQAVGNYGEIYNRHLGPDSAVPIPRGLNNLYRNGGVLTSPPFQ 381


>gi|295689853|ref|YP_003593546.1| extracellular solute-binding protein family 3 [Caulobacter segnis
           ATCC 21756]
 gi|295431756|gb|ADG10928.1| extracellular solute-binding protein family 3 [Caulobacter segnis
           ATCC 21756]
          Length = 376

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 143/319 (44%), Positives = 207/319 (64%), Gaps = 6/319 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++ RG+L CG+  GL+GFA     G W+GFD DFCRA ++AIF      ++ P ++
Sbjct: 62  TLAAVRARGYLVCGVQQGLIGFAYADNTGRWRGFDTDFCRATAAAIFGRAEAARFTPTSS 121

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ER   LQ+ ++D+L RNT  T  R+      F  + Y+DGQ F++ K  G++  +QL+G
Sbjct: 122 TERLTVLQAGEVDVLWRNTSATFSRDA--KFDFSGVNYYDGQAFLVRKALGVAHAAQLNG 179

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A IC+Q G+T+E+ L DYF+AH + Y P+VF+  ++  AAY   +CD YT D+S L A +
Sbjct: 180 ARICIQTGSTSEMNLTDYFRAHKLTYEPVVFDTEDKARAAYGREQCDVYTADLSNLAAAR 239

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T  RP +H+ILP++ISK PL P + QGD  W N+V WT  AM+ AEELG+T  N+  + 
Sbjct: 240 ATLARPGDHLILPEVISKEPLGPVVRQGDDAWGNVVRWTLNAMILAEELGVTSANVEALR 299

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
             + NP+++R LG +     G  +GL+ D+ ++IIR +GNYGE+F RNLG  + LKI RG
Sbjct: 300 ARSDNPEIRRLLGAEP--GYGAMIGLSDDFAFQIIRQVGNYGEVFARNLGPATPLKIERG 357

Query: 326 YNALWSKG--GLMYAPPIR 342
            NALW+    GL+YAPP+R
Sbjct: 358 LNALWNASPPGLLYAPPMR 376


>gi|87302592|ref|ZP_01085409.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus sp. WH 5701]
 gi|87282936|gb|EAQ74893.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus sp. WH 5701]
          Length = 405

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 135/333 (40%), Positives = 206/333 (61%), Gaps = 8/333 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +     +  L  I+ R  L CG++  L GF+ +  +G + G D D CRA+++A+  DP
Sbjct: 75  SGSGGGVQSVKLSTIRGRDKLVCGVDGKLPGFSFLGPDGTYSGLDADTCRAVAAAVLGDP 134

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHK 133
           SK++Y  LN+ ERF AL S ++D+L+RNT  TL R+ +   G++F P T++DGQG ++  
Sbjct: 135 SKVEYRDLNSSERFAALASGEVDMLARNTTMTLSRDSAGGNGISFGPTTFYDGQGVMVPV 194

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             G  ++  L G  ICV++GTTTEL LAD  +   + Y P+ F+  ++  AAY   RC A
Sbjct: 195 ASGARTLKDLDGKPICVESGTTTELNLADRMREQGIAYTPLKFQTGDQTYAAYLGGRCVA 254

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            T D S L A + +  +P EH++LP+++SK PL PA + GD  W + + WT +A+  AEE
Sbjct: 255 VTSDRSQLAAKRSSFPKPDEHILLPEVMSKEPLTPASVNGDPAWADALRWTVFALFQAEE 314

Query: 254 LGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
           LGIT+ N+         +T   D++RFLG++   + G+ LGL  D+  + I  +GNYGE+
Sbjct: 315 LGITKANVAAKVAEAKANTNQADLRRFLGVE--GDFGKQLGLPADFVAKTIAAVGNYGEI 372

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           F+RN+G  S LK+ R  N LW++GGL+Y+PP R
Sbjct: 373 FERNVGTGSPLKLERAENRLWTQGGLIYSPPFR 405


>gi|326204744|ref|ZP_08194599.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
 gi|325985115|gb|EGD45956.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
          Length = 363

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 137/365 (37%), Positives = 208/365 (56%), Gaps = 27/365 (7%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFL 36
           M K F          +L   +L  T  S++                  SIL  +K RG +
Sbjct: 1   MRKIFNAKALGKVAMLLVASVLVVTGCSSSNEQSDTSGKSGTKGQGSESILQKVKARGKV 60

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             G +T L GF  ++ +G + GFD++  +A ++AI  DP+  +  P+  + RF ALQ+ +
Sbjct: 61  YIGCDTVLPGFGFLETDGKYSGFDIEIGKAFAAAILGDPNAAEMKPVTGQTRFTALQTGE 120

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           IDILSR T  ++ R+ +LG+ F P  ++DGQG ++ K K + +   L G  I V+ GTTT
Sbjct: 121 IDILSRATTMSITRDTTLGIRFLPTDFYDGQGIMVKKNKNVKTFKDLDGMRIGVEQGTTT 180

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E  +     A   K + +VFE  + I +AY A   DA+T D S L +      +  EH I
Sbjct: 181 EKNVTTKLAAVGAKANIVVFENQDSIVSAYEAGSIDAWTSDKSGLVSRLAGMSKQDEHAI 240

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
           L + +SK PL PAI  GD +W+N+  WT YA++ AEELGITQ N+ ++ K + +P ++  
Sbjct: 241 LEETLSKEPLTPAIKAGDDQWFNVTRWTLYALMQAEELGITQANVEEMVK-SDDPSIRSL 299

Query: 277 LGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLM 336
           LG +   ++G+ LGL+ DW  ++I+ +GNYGE+++R LG  S  K+ RG NALW+ GGLM
Sbjct: 300 LGAE--GDLGKNLGLSNDWVVKLIKGVGNYGEIYERTLGQGSAFKLDRGLNALWTDGGLM 357

Query: 337 YAPPI 341
           Y+PP 
Sbjct: 358 YSPPF 362


>gi|27378020|ref|NP_769549.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27351166|dbj|BAC48174.1| bll2909 [Bradyrhizobium japonicum USDA 110]
          Length = 337

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 208/318 (65%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  +K RG L CG++ G  GF+   + G++KG DVD+CRAL++ +  D SK++Y+ L A
Sbjct: 23  TLDTVKSRGTLVCGVSAGFAGFSAPDSQGNYKGLDVDYCRALAAGVLGDASKVRYVSLTA 82

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           + RF ALQS +ID+L RN+  T LR ++LGL   PI ++DGQGF++ K  G+  +  L G
Sbjct: 83  QNRFTALQSGEIDVLYRNSTQTYLRGVTLGLRQGPINFYDGQGFVVKKDLGVKDIKDLKG 142

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A++CV  GTT E+TL DY +A+ + + P+VF+RV+ +   +   RCDA T D SAL    
Sbjct: 143 ATVCVAQGTTHEVTLGDYGRANGIDWKPLVFDRVDTMYQTFFGGRCDAMTQDASALAGAV 202

Query: 206 LT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
            T    P+++V+LP  ISK PL P    GD  W +I++W HY ++ AEELG+TQ N++++
Sbjct: 203 TTAAPNPADYVVLPQTISKEPLGPFTRNGDEVWSDIITWLHYGLIEAEELGVTQANVDEM 262

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +K  T P +QR LG   S ++G  LGL   W    I+  GNYGE+++RN+G  S LK+ R
Sbjct: 263 AKSQT-PAIQRLLGA--SGDLGSRLGLDNKWLVTAIKATGNYGEIYERNVGKASPLKLDR 319

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LWSKGGLMYA P +
Sbjct: 320 GLNGLWSKGGLMYAVPFK 337


>gi|156741676|ref|YP_001431805.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM
           13941]
 gi|156233004|gb|ABU57787.1| extracellular solute-binding protein family 3 [Roseiflexus
           castenholzii DSM 13941]
          Length = 411

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 131/323 (40%), Positives = 199/323 (61%), Gaps = 10/323 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84
           L  +K+RG+L CG N  L GF         W GFDVDFCRA+++AIF D +K++++ L  
Sbjct: 92  LARVKERGYLICGTNADLPGFGFYDNVRQAWSGFDVDFCRAVAAAIFGDATKVEFVALGT 151

Query: 85  ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                 RF A++  ++D+L RNT WTL R    GLAF P T+ DGQ F++  +  I+ + 
Sbjct: 152 GPGPNNRFDAVREGRVDVLFRNTTWTLGRN-ISGLAFGPTTFHDGQTFMVRIRDRITKLE 210

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  ICV  GTT+E  L D F A  +++   V    +E+  AY    CDA T D S L
Sbjct: 211 DLAGKVICVAKGTTSEQNLNDDFAARGIQFTARVLNGEDELYPAYDEGECDAVTSDSSQL 270

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            A +     P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+
Sbjct: 271 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 330

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           +++   TT+P ++R LG++   N GE LGL  D+ Y+II+ +GNYG++++RNLG  + + 
Sbjct: 331 DRLRASTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 388

Query: 322 IPRGYNALWS--KGGLMYAPPIR 342
           + RG N +W+   GG++ +PP R
Sbjct: 389 LDRGPNKVWNLGAGGVLASPPFR 411


>gi|3182934|sp|Q52663|BZTA_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine-binding
           protein BztA; Flags: Precursor
 gi|1655712|gb|AAB17886.1| BztA [Rhodobacter capsulatus SB 1003]
          Length = 338

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     + +    + + +AS L D+K RG L CG N GL GFA   ANG ++GFD
Sbjct: 1   MKKSVFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  C+A+++A+  DP K++Y+PL  + RF AL S ++D+L RN+ WT  R+  L L F  
Sbjct: 59  VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+++K  G+SS  +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+      
Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    + A  CD+YT D S L + + T    ++ VILP+IISK PL P +  GD  W +I
Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YA+V AEE GIT+ N+ +V+  T NP+++R LG++   ++G+ +GL  D+  R I
Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F+ N+G  + + + RG NA W++GGLMYAPP R
Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338


>gi|331005342|ref|ZP_08328727.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
 gi|330420839|gb|EGG95120.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
          Length = 336

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 145/341 (42%), Positives = 216/341 (63%), Gaps = 6/341 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  + + +LF  +    A  L D+++RGF+ CG++ GL GF++    G W G D
Sbjct: 1   MK---LLKTIIVGVLFLAALGVKAGTLEDVRERGFVSCGVSDGLTGFSQKNDKGVWSGLD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D  K+ Y PL AKERF+ALQS ++D+LSRNT WTL R++++GL F  
Sbjct: 58  VDVCRAVAAAVFSDADKVAYKPLTAKERFVALQSNEVDLLSRNTTWTLTRDVAMGLKFAG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ ++ G+SS  +L GAS CVQAG+T+E+ +  +F  +NM Y   +F++  
Sbjct: 118 INYYDGQGFLVSQELGVSSAFELDGASFCVQAGSTSEVGIEIFFNNNNMTYKRRIFDKSS 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++        CD  + D S LY+ +     P   V+LP++ISK PL P + QGD  W+NI
Sbjct: 178 DVRDGLDKGMCDVISSDQSQLYSFRTGLMNPESFVVLPEVISKEPLGPVVRQGDDTWFNI 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  AM+ AE LGIT  N++ + K       +R LG +    +     L+ DW Y II
Sbjct: 238 VRWSLVAMIEAEFLGITSLNVDILRKSGELGQ-KRLLGSE--GELSTNSSLSADWAYNII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           + +GNY E F+RN+G++S LKI RG NA W+ GG++Y+PPI
Sbjct: 295 KQVGNYSESFERNVGSESTLKIARGLNAQWNAGGILYSPPI 335


>gi|254432874|ref|ZP_05046577.1| polar amino acid transport system substrate-binding proetin
           [Cyanobium sp. PCC 7001]
 gi|197627327|gb|EDY39886.1| polar amino acid transport system substrate-binding proetin
           [Cyanobium sp. PCC 7001]
          Length = 344

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 143/346 (41%), Positives = 213/346 (61%), Gaps = 12/346 (3%)

Query: 7   VSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +++L LI L   +        ++ L  I  R  L CG+   L GF+ V+ +G + G DVD
Sbjct: 1   MALLGLIPLAACAPPDGSGLQSAKLNGITARDKLVCGVEGTLPGFSFVEPDGRYSGLDVD 60

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLAFRP 120
            C+A+++A+  DP K++Y  LN+ ERF AL S ++D+L+RNT  TL R+     GL+F P
Sbjct: 61  TCKAVAAAVLGDPDKVEYRNLNSSERFAALASGEVDMLARNTTATLSRDAAGGNGLSFAP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            T++DGQG +   K GI+ +  LSG +ICV++GTTTEL LAD  +  ++ Y P+ F+  +
Sbjct: 121 TTFYDGQGVMAPVKSGITDLKGLSGKAICVESGTTTELNLADRMREIDVPYTPLKFQTSD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  AAY   RC A T D S L   + +   P +H +LPD++SK PL+PA    D  W + 
Sbjct: 181 QTYAAYLGGRCAAVTSDRSQLAGKRSSFPAPDDHQLLPDVLSKEPLSPATTNADPAWADA 240

Query: 241 VSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           + W  ++++ AEE GITQ N++    +   +T   D++RF G++   + G  LGL  D+T
Sbjct: 241 LRWIVFSLMQAEEWGITQANLDSKLAEAQANTNLADLRRFFGVE--GDFGRQLGLPADFT 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            R IR +GNYGE+F+RN+G  S LK+ RG N LWS+GGL+YA P R
Sbjct: 299 VRAIRAVGNYGEIFERNVGTTSRLKLERGLNRLWSEGGLIYAQPFR 344


>gi|78213330|ref|YP_382109.1| extracellular solute-binding protein [Synechococcus sp. CC9605]
 gi|78197789|gb|ABB35554.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           CC9605]
          Length = 353

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 207/354 (58%), Gaps = 15/354 (4%)

Query: 1   MYK---DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M++      +  L  +  F  S +       S L  +K RG L CG++  + GF+ +  +
Sbjct: 1   MFRTSSRVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLNPD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + G DVD CRA+++A   D  K+QY PL A ERF AL+S +ID+LSRNT  TL R+  
Sbjct: 61  GRYTGLDVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAM 120

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG +++   G+ S++ LSG SICV +GTTTE  L D F +  + Y
Sbjct: 121 GGNGLRFGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASQGLPY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++   Y   RC+A T D S L A +     P  H IL D ISK PLAPA++
Sbjct: 181 TPIKYQDLNQVVGGYLQGRCEAMTSDRSQLAAARSGFSDPQAHQILDDRISKEPLAPAVV 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGE 287
            GD    + ++W   A++ AEE GITQ N++    Q + D +   ++RFLG+D    +G 
Sbjct: 241 GGDQPMGDAMTWVVNALIEAEERGITQANVDAVVKQAAADPSQTSLRRFLGVDP--GLGR 298

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            LGL  D+  ++IR  GNYGE+++R+LG  S + IPRG N L  +GGLM +PP 
Sbjct: 299 KLGLADDFVVQVIRATGNYGEIYNRHLGLDSAVAIPRGANRLAGEGGLMISPPF 352


>gi|163742834|ref|ZP_02150218.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161383798|gb|EDQ08183.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 347

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 140/349 (40%), Positives = 209/349 (59%), Gaps = 9/349 (2%)

Query: 1   MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   F +   + +    L   + +   S L  +K RG L C +     GF ++  +GDW+
Sbjct: 1   MKNLFSMLSCAAMAAGGLSIAAPAAAQSTLETVKTRGHLNCQVGPPRAGFYQLLESGDWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV  CRA+++AIF DP+K+++  ++A  RF +L + + D+LSR   WT+ R+ +LG+ 
Sbjct: 61  GSDVAVCRAMAAAIFGDPNKVEFQSVSASVRFTSLANGESDVLSRTATWTVGRDAALGID 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    + DGQGF++ K  GI S   L+GA++CV  G T+E TL D+ +A+N+    + F+
Sbjct: 121 FTAPVFHDGQGFLVRKDSGIKSAFDLTGATVCVITGHTSEATLQDFSRANNLDIQAVAFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               ++  Y    CDA T D   L +       PSEHV+LP+I+SK PL PA+  GD +W
Sbjct: 181 DSAIVNETYLNGGCDAITTDKGVLASEARGFPDPSEHVVLPEILSKEPLTPAVRNGDNQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
            +IV WT +A++ AEELGITQ N+ +++ +  NP V RFLG +   N G  LGL KDW  
Sbjct: 241 GDIVQWTVFALINAEELGITQANVEEIAANPPNPLVARFLGAEGELNTG--LGLPKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSE--LKIPR--GYNALWSKGGLMYAPPIR 342
             I+ +GNYGE+++  LG+     L IPR    NALW++GGLM++PP R
Sbjct: 299 HAIKAVGNYGEIYEHYLGDGRPEALGIPRAGSANALWTEGGLMFSPPFR 347


>gi|294675892|ref|YP_003576507.1| glutamate/aspartate ABC transporter periplasmic
           glutamate/aspartate-binding protein BztA [Rhodobacter
           capsulatus SB 1003]
 gi|294474712|gb|ADE84100.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein BztA [Rhodobacter
           capsulatus SB 1003]
          Length = 338

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     + +    + + +AS L D+K RG L CG N GL GFA   ANG ++GFD
Sbjct: 1   MKKSAFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  C+A+++A+  DP K++Y+PL  + RF AL S ++D+L RN+ WT  R+  L L F  
Sbjct: 59  VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+++K  G+SS  +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+      
Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    + A  CD+YT D S L + + T    ++ VILP+IISK PL P +  GD  W +I
Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YA+V AEE GIT+ N+ +V+  T NP+++R LG++   ++G+ +GL  D+  R I
Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F+ N+G  + + + RG NA W++GGLMYAPP R
Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338


>gi|87120913|ref|ZP_01076805.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
 gi|86163751|gb|EAQ65024.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
          Length = 325

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 138/327 (42%), Positives = 205/327 (62%), Gaps = 2/327 (0%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L D+KKRGFL+CG      GFA    N  W+G ++D+C+ALSSA+F D 
Sbjct: 1   MGATAPVFADTLDDVKKRGFLRCGTGEAKAGFAMPGDNNQWQGMEIDYCKALSSAVFGDE 60

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K + +P+ +K RF +L S++ID+L + T WT  R+  LG+ F    +FDGQGF++ K+ 
Sbjct: 61  TKFEVVPVTSKVRFTSLTSREIDVLVKGTTWTYSRDAKLGVDFAAYWFFDGQGFLIKKEL 120

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G++S  QL+GA+IC+  GTT+E  +AD+F+ ++MKY P+V +   E   A +  RCD  T
Sbjct: 121 GVTSAKQLNGATICISPGTTSEKNVADFFRTYDMKYKPVVIKAGPETLDALQKGRCDVIT 180

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D+SAL + +     P + V+L D I+K PL+  + Q D+ W ++++WT  A+V AEELG
Sbjct: 181 NDLSALASDRQKFTNPDDFVVLQDNIAKEPLSLYVRQNDSRWKDVITWTRNALVEAEELG 240

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           ITQ+N+ Q +K   +P V R LG       GE LGL   W +  I  +GNYGE+F+RN+G
Sbjct: 241 ITQENVGQHAKHPIDPRVARLLGAK--GAYGEMLGLPNTWAHDAISAVGNYGEIFERNVG 298

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
            Q+ + + R  N  W  GGL++APP R
Sbjct: 299 EQTRMGLTRNLNQQWYDGGLVFAPPFR 325


>gi|197105093|ref|YP_002130470.1| lysine-arginine-ornithine-binding periplasmic protein
           [Phenylobacterium zucineum HLK1]
 gi|196478513|gb|ACG78041.1| lysine-arginine-ornithine-binding periplasmic protein
           [Phenylobacterium zucineum HLK1]
          Length = 337

 Score =  310 bits (793), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 146/324 (45%), Positives = 221/324 (68%), Gaps = 4/324 (1%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +T +  L  +++RG + CG++ GL GFA   A G W+GFDVD CRA+++A+F D  ++++
Sbjct: 16  ATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRF 75

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P++  +RF  L++++IDILSRNT  TL R+  LGL F   TY+DGQGF++ +  G++S 
Sbjct: 76  VPIDGSDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASA 135

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            +L GA +CVQAGT +E  LAD+F+A  + Y P++ +  E+    Y +  CD ++ DIS 
Sbjct: 136 EELGGARVCVQAGTASETNLADFFRARGLDYQPVLAKSEEDARRLYESDGCDVFSADISG 195

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L A +     P+ HVILP++ISK PL P + Q D  W +IV+WT +A+V AEELG++ + 
Sbjct: 196 LAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTVHAIVLAEELGLSSRT 255

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           + Q  +  T+P+ +R LG++   N+GE LG+ +DW Y++IR +G Y E+F R+LG  S L
Sbjct: 256 VEQARETATDPETRRLLGVE--GNLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSAL 313

Query: 321 KIPRGYNALWS--KGGLMYAPPIR 342
           K+ RG NALW+  K GLMYAPP+R
Sbjct: 314 KLERGLNALWTAPKPGLMYAPPVR 337


>gi|123966465|ref|YP_001011546.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200831|gb|ABM72439.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9515]
          Length = 349

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 141/350 (40%), Positives = 208/350 (59%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    F  I    +L     S      S L  I+KR  L CG++  + GF+ ++ +G +K
Sbjct: 1   MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYK 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL- 116
           G DVD C+A +SAI  D  KIQ+ PL A ERFLA+++  ID+LSRNT +TL R+   G  
Sbjct: 61  GLDVDICKAFASAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNG 120

Query: 117 -AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F P+ + DGQG ++ K  GI S+ +L+  SICV +GTTTE  + D F++ ++ Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC+A T D S L A +       +H+IL +++SK PLAPA    + 
Sbjct: 181 YQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +  + + WT +A++ AEE GITQ NI+        +     ++RFLGID    +GE +GL
Sbjct: 241 KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGID--GGLGEKIGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+   +I+  GNYGE++DRNLG  S++ IPRG N ++SKGGL  +PP 
Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGKDSDVPIPRGLNKIYSKGGLHISPPF 348


>gi|33594685|ref|NP_882329.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella pertussis Tohama I]
 gi|33598479|ref|NP_886122.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella parapertussis 12822]
 gi|33603422|ref|NP_890982.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella bronchiseptica RB50]
 gi|33564761|emb|CAE44086.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella pertussis Tohama I]
 gi|33574608|emb|CAE39258.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella parapertussis]
 gi|33577546|emb|CAE34811.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella bronchiseptica RB50]
          Length = 338

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 144/324 (44%), Positives = 227/324 (70%), Gaps = 3/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S +   +   ++KK+GF++CG++TG+ GF+   + G+WKG DVD CRA+++ +F D SK 
Sbjct: 18  SVAHAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDMCRAIAATMFGDASKF 77

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +  PLN ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K+ G+ 
Sbjct: 78  KVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKELGVK 137

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +L+GA++CVQ GTTTEL LAD+F+ + +++ P+V ++ +EI  A+ A RCDA+T D 
Sbjct: 138 SAKELNGATVCVQPGTTTELNLADWFRGNKIEFKPVVIDKYDEIVRAFSAGRCDAFTTDK 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L + + T ++P  +VILP+  SK PL P + QGD +W+N+V W+  AM+ AEE GIT 
Sbjct: 198 SQLASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITS 257

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           KN+++++K ++NP++QR LG+  +  +G+ LG+   W + II+ +GNYGE F+  LG  S
Sbjct: 258 KNVDEMAK-SSNPNIQRILGV--TPGMGKNLGVDDKWAFNIIKQVGNYGESFEATLGKSS 314

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            +K+ RG NA + +GGLMY  P+R
Sbjct: 315 AMKLERGLNASYKQGGLMYGWPVR 338


>gi|114771237|ref|ZP_01448657.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [alpha
           proteobacterium HTCC2255]
 gi|114548162|gb|EAU51049.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [alpha
           proteobacterium HTCC2255]
          Length = 339

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 148/343 (43%), Positives = 211/343 (61%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     +    F +    A  L D++  G LKCG+ TGL GFA   ANG W GFD
Sbjct: 1   MKKSAFFG--TIAAATFAAGFAAAGTLEDVQAAGELKCGVTTGLAGFALADANGVWDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDGNAVKFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K  G+SS   L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMAPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  A Y A  CD +T D S L + + T + P +H++LP+I+SK PL P +  GD  W +I
Sbjct: 179 EAQAQYLAGACDVFTTDASGLASTRATFENPDDHIVLPEIVSKEPLGPLVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
             WT  A++TAEELG+T  N+ + + +   NP+V R LG +   ++G  LGL K W  R 
Sbjct: 239 ARWTLNALITAEELGVTSANVAEHTANAGNNPEVNRLLGTE--GDLGGMLGLDKQWASRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G  + + I RG NA W+ GGL+Y+ P R
Sbjct: 297 IAVNGNYGEIFEKNIGVNTPIGIARGLNASWTNGGLIYSAPFR 339


>gi|152994191|ref|YP_001339026.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150835115|gb|ABR69091.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 343

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 132/325 (40%), Positives = 209/325 (64%), Gaps = 4/325 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  +K+RG++ C I     GF  +   G+W+G D+D CR ++SA+F D SK++
Sbjct: 21  AADTTSTLDAVKERGYVNCVIGNSFPGFYSLNKAGEWQGMDIDMCRGVASAVFGDASKVK 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +LP+   + F +++S + DILS+   WTL R+ + GL F    ++DGQGF++ K  G+ S
Sbjct: 81  FLPVQWAQSFTSIKSGKGDILSKGMTWTLSRDSAQGLDFLDTYFYDGQGFMVRKDLGVKS 140

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V +L+GA++CV  GT++EL +ADY +A+N+    +VF+     + A+  + CDA T D S
Sbjct: 141 VKELNGATVCVLTGTSSELNIADYSRANNLDIKTVVFDDSSVRNTAFFNNNCDALTNDKS 200

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L A +     P+++VILP+ ISK  L+ A+ Q D+EW N+V WT  AMV AEE G+  +
Sbjct: 201 GLAAQRSAAPNPNDYVILPETISKEALSFAVKQNDSEWANVVKWTFAAMVAAEEFGVNSQ 260

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+ ++  ++ +P V+R LG++   N G  LGL +DW +++I+++GNYGE+++RN+G  S 
Sbjct: 261 NVEKMRAESQSPVVRRLLGVEGDLNTG--LGLPQDWAFQVIKNVGNYGEVYERNVGTDSV 318

Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342
           L + R    N LW+KGGLMYA   R
Sbjct: 319 LGLDREGTLNELWTKGGLMYAKSFR 343


>gi|221370067|ref|YP_002521163.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
 gi|221163119|gb|ACM04090.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
          Length = 335

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           F+ +   L  +K+RG + CG++    GFA   + G W GF+VDFC A+++A+F D +K++
Sbjct: 15  FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 74

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++ L++++RF A+QS ++D+L+RN   TL R+ +LGL F P  ++ G GF++    GI  
Sbjct: 75  FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 134

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V  L GA+IC+  G+TTE  +A  F A  + Y P+V E  +++  AY   RCDA T D +
Sbjct: 135 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 194

Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           AL  ++  +   P +HV+LP I SK PLA A+ QGD +WY++V W  YA   AEELG+TQ
Sbjct: 195 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 254

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N++++ K + +PD+Q  LG+    + G  LG+  DW Y I++ +GNY +++ R+ G  +
Sbjct: 255 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 311

Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341
            + + R  N LW++GGL+Y  P+
Sbjct: 312 PVALDRDQNQLWTEGGLLYGFPM 334


>gi|293602099|ref|ZP_06684552.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Achromobacter piechaudii ATCC
           43553]
 gi|292819501|gb|EFF78529.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Achromobacter piechaudii ATCC
           43553]
          Length = 357

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 142/317 (44%), Positives = 223/317 (70%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              ++KK+GF++CG++TG+ GF+   + G++KG DVD CRA++S +F D +K+++ PLN 
Sbjct: 44  TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDMCRAIASTMFGDATKVKFTPLNT 103

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K   + S  +L+G
Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 163

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI  A+ A RCDA+T D S L + +
Sbjct: 164 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 223

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T + P + VILP+  SK PL P + QGD +W+N+V W+  AM+ AEE GIT+ N+++++
Sbjct: 224 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITKANVDEMT 283

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K ++NP++QR LG+  +  +G+ LG+   W Y II+++GNYGE F+  LG  S +K+ RG
Sbjct: 284 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFEATLGKGSAMKLERG 340

Query: 326 YNALWSKGGLMYAPPIR 342
            NA + +GGLMY  P+R
Sbjct: 341 LNASYKQGGLMYGWPVR 357


>gi|126464337|ref|YP_001045450.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126106148|gb|ABN78678.1| extracellular solute-binding protein, family 3 [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 345

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           F+ +   L  +K+RG + CG++    GFA   + G W GF+VDFC A+++A+F D +K++
Sbjct: 25  FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++ L++++RF A+QS ++D+L+RN   TL R+ +LGL F P  ++ G GF++    GI  
Sbjct: 85  FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V  L GA+IC+  G+TTE  +A  F A  + Y P+V E  +++  AY   RCDA T D +
Sbjct: 145 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 204

Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           AL  ++  +   P +HV+LP I SK PLA A+ QGD +WY++V W  YA   AEELG+TQ
Sbjct: 205 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 264

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N++++ K + +PD+Q  LG+    + G  LG+  DW Y I++ +GNY +++ R+ G  +
Sbjct: 265 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 321

Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341
            + + R  N LW++GGL+Y  P+
Sbjct: 322 PVALDRDQNQLWTEGGLLYGFPM 344


>gi|33865374|ref|NP_896933.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 8102]
 gi|33632543|emb|CAE07355.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 8102]
          Length = 353

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 140/349 (40%), Positives = 201/349 (57%), Gaps = 12/349 (3%)

Query: 3   KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +   +  + ++       +       S L  +K+R  L CG++  + GF+ +   G + G
Sbjct: 6   RRILIGAITVVAGLLGGCASLDEAGRSRLDLVKQRDELLCGVSGKIPGFSFLTPKGTYTG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGL 116
            DVD CRA+++A   D  K+QY PL A ERF AL+S +ID+LSRNT  TL R+     GL
Sbjct: 66  LDVDICRAMAAAFLGDADKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAEGGNGL 125

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P+ + DGQG I+    G++S++ LSG +ICV +GTTTE  L D F +  + Y PI +
Sbjct: 126 GFAPVVFHDGQGLIVPVNSGVTSLADLSGQAICVGSGTTTEQNLNDAFASKGIPYTPIKY 185

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           + + ++   Y   RC A T D S L A +     P  HVIL D +SK PLAPA++ GD  
Sbjct: 186 QDLNQVVGGYLQGRCQAMTSDRSQLAAARSGFIEPEGHVILEDRLSKEPLAPAVVGGDQR 245

Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
             + ++W  YA++ AEE GITQ N++        D +   ++RFLG+D    +G  LGL 
Sbjct: 246 LVDAMTWVVYALIEAEERGITQANLDRQLRAAEADPSQAAMRRFLGVD--GGLGRKLGLP 303

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            D+  + IR  GNYGE++DR+LG +S + IPRG N L   GGLM APP 
Sbjct: 304 DDFVVQAIRATGNYGEIYDRHLGPESPVAIPRGANRLAEDGGLMIAPPF 352


>gi|311109074|ref|YP_003981927.1| general L-amino acid-binding periplasmic protein AapJ 4
           [Achromobacter xylosoxidans A8]
 gi|310763763|gb|ADP19212.1| general L-amino acid-binding periplasmic protein AapJ 4
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  308 bits (790), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 143/317 (45%), Positives = 221/317 (69%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              ++KK+GF++CG++TG+ GF+   + G++KG DVD CRA++S +F D +K+++ PLN 
Sbjct: 25  TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDLCRAIASTMFGDATKVKFTPLNT 84

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K   + S  +L+G
Sbjct: 85  QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 144

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI  A+ A RCDA+T D S L + +
Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T + P + VILP+  SK PL P + QGD +W+NIV W+  AM+ AEE GIT+ N+++++
Sbjct: 205 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITKANVDEMA 264

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K + NP++QR LG+  +  +G+ LG+   W Y II+++GNYGE F+  LG  S +K+ RG
Sbjct: 265 K-SPNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFENTLGKSSAMKLERG 321

Query: 326 YNALWSKGGLMYAPPIR 342
            NA +  GGLMY  P+R
Sbjct: 322 LNASYKNGGLMYGWPVR 338


>gi|47114851|emb|CAE48356.1| unnamed protein product [Methylocystis sp. SC2]
          Length = 343

 Score =  308 bits (789), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 145/319 (45%), Positives = 213/319 (66%), Gaps = 4/319 (1%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  I KRG+L CG++    GFA+    G+W+GFDVDFCRA++SA+ DDP+K +++ L
Sbjct: 29  GPTLAQIMKRGYLTCGVS-DAPGFAQRDGAGEWRGFDVDFCRAVASAVLDDPNKARFVEL 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + KER  ALQ+  +D+L   + WT  R+ S  L +  I   DGQGF++ +++  +SV  L
Sbjct: 88  SQKERAGALQAGAVDLLVSASPWTQARDTSHRLIYAAIFLHDGQGFLVRRQRKTASVQDL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GASICV+ GT  EL +AD+F+A   KY P +F  +E+   AY   +CDA T D+S L+ 
Sbjct: 148 DGASICVEQGTPYELAVADFFRARKEKYDPKLFPSLEDAAKAYDEEKCDALTADVSTLHG 207

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           +++    P++H +LPDI+SKSP  P + QGD +W NIV WT +AM+ AEEL +++ N + 
Sbjct: 208 VRIGLTAPADHAVLPDILSKSPRGPLVRQGDDQWLNIVRWTLFAMIDAEELEVSKANADA 267

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
               + NP ++R LG+D     G+ LGL++DW YRI++H+GNY ++F+RNLG  +   + 
Sbjct: 268 AL-SSENPQIRRLLGVD--GAHGDDLGLSQDWAYRIVKHVGNYADVFERNLGRGAPYAME 324

Query: 324 RGYNALWSKGGLMYAPPIR 342
           R  NALW+KGGLMYAPP+R
Sbjct: 325 RRLNALWNKGGLMYAPPVR 343


>gi|78779551|ref|YP_397663.1| extracellular solute-binding protein [Prochlorococcus marinus str.
           MIT 9312]
 gi|78713050|gb|ABB50227.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Prochlorococcus marinus str. MIT 9312]
          Length = 349

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 140/350 (40%), Positives = 206/350 (58%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    F  I    +L     S      S L  I++R  L CG++  + GF+ ++ +G +K
Sbjct: 1   MMNRLFFGIAAFGLLLTGCASNQNDNISRLSLIQERDELICGVSGKIPGFSFIERDGSYK 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115
           G DVD C+A ++AI  D  KIQ+ PL A ERFLA+++  ID+LSRNT  TL R+     G
Sbjct: 61  GLDVDICKAFAAAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTLTLSRDSFGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L F P+ + DGQG ++ K  GI S+ +L+  SICV +GTTTE  + D F++ ++ Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIESIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +       +H+IL D++SK PLAPA    + 
Sbjct: 181 YQDLNQVVAGYLQGRCQAMTSDRSQLAAARSGFKNAKDHIILDDVLSKEPLAPASDGSEQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +  + + WT +A++ AEE GITQ NI         +     ++RFLG+D    +GE +GL
Sbjct: 241 KLADAMRWTVFALIAAEEQGITQSNIADRLQLAKNNPQLKSLRRFLGVD--GGLGEKIGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+   +I+  GNYGE++DRNLG  S++ IPRG N ++SKGGL  +PP 
Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGIDSDVPIPRGLNEIYSKGGLHISPPF 348


>gi|82545639|ref|YP_409586.1| periplasmic binding transport protein [Shigella boydii Sb227]
 gi|81247050|gb|ABB67758.1| putative periplasmic binding transport protein [Shigella boydii
           Sb227]
          Length = 321

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 149/321 (46%), Positives = 216/321 (67%), Gaps = 18/321 (5%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDF----------------CRALSSAIFDDPSKIQYL 81
           CGI+ GL+GF+   A+G + G DVD                 CR++++A+F D +K++Y 
Sbjct: 3   CGISDGLLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYT 62

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  
Sbjct: 63  PLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAK 122

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S L
Sbjct: 123 ELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQL 182

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           YAL++    P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+
Sbjct: 183 YALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNV 242

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           ++ + +   PD+   LG +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LK
Sbjct: 243 DEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLK 300

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG N LW+ GG+ YAPP+R
Sbjct: 301 IKRGQNNLWNNGGIQYAPPVR 321


>gi|72382453|ref|YP_291808.1| extracellular solute-binding protein [Prochlorococcus marinus str.
           NATL2A]
 gi|72002303|gb|AAZ58105.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Prochlorococcus marinus str. NATL2A]
          Length = 353

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 213/354 (60%), Gaps = 15/354 (4%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K          V +  L     T+   N+S L  IK R  L CG++  + GF+ +K++
Sbjct: 1   MIKKIMRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G ++G DVD C+A ++AI  D  KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S
Sbjct: 61  GTYQGLDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSS 120

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG ++ K+  IS +  L+  SICV +GTTTE  + D F++ ++ Y
Sbjct: 121 GGNGLTFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++ A Y   RC A T D S L A +     P EH+IL D++SK PLAPA  
Sbjct: 181 TPIKYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPQEHIILDDVLSKEPLAPASD 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGE 287
             D +  + + W  +++++AEE GIT+ NI++       +     ++RFLGID    +GE
Sbjct: 241 GQDQKLADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGID--GGLGE 298

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            +GL+ D+  ++I   GNYGE+++R+LG  SE+ IPRG N L+ KGG+  +PP 
Sbjct: 299 KIGLSNDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352


>gi|260434256|ref|ZP_05788226.1| general L-amino acid-binding periplasmic protein AapJ
           [Synechococcus sp. WH 8109]
 gi|260412130|gb|EEX05426.1| general L-amino acid-binding periplasmic protein AapJ
           [Synechococcus sp. WH 8109]
          Length = 368

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 207/354 (58%), Gaps = 15/354 (4%)

Query: 1   MYK---DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M++      +  L  +  F  S +       S L  +K RG L CG++  + GF+ + ++
Sbjct: 16  MFRSSSRVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLSSD 75

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + G DVD CRA+++A   D  K+QY PL A ERF AL+S +ID+LSRNT  TL R+  
Sbjct: 76  GRYTGLDVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAV 135

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG +++   G+ S++ LSG SICV +GTTTE  L D F +  + Y
Sbjct: 136 GGNGLRFGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASKGLPY 195

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++   Y   RC A T D S L A +     P  H IL D ISK PL+PA++
Sbjct: 196 IPIKYQDLNQVVGGYLQGRCAAMTSDRSQLAAARSGFSDPEAHQILDDRISKEPLSPAVV 255

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGE 287
            GD    + ++W    ++ AEE GITQ N++    Q + D++   ++RFLG+D    +G 
Sbjct: 256 GGDQPMGDAMTWVINGLIEAEERGITQANVDAVVKQAAADSSQTALRRFLGVDP--GLGR 313

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            LGL  D+  ++IR  GNYGE+++R+LG  S + IPRG N L  +GGLM +PP 
Sbjct: 314 KLGLADDFVVQVIRATGNYGEIYNRHLGPDSAVAIPRGANRLAGEGGLMISPPF 367


>gi|163854807|ref|YP_001629105.1| putative extracellular solute-binding protein [Bordetella petrii
           DSM 12804]
 gi|163258535|emb|CAP40834.1| putative extracellular solute-binding protein [Bordetella petrii]
          Length = 338

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 145/317 (45%), Positives = 220/317 (69%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
               +KK+GF++CG++TG+ GF+   + G+WKG DV  CRA+++ +F+D +K +  PLN 
Sbjct: 25  TFDSVKKKGFVQCGVSTGIPGFSMADSKGEWKGIDVAMCRAIAATMFNDSTKFKVTPLNT 84

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K  G+ S  +L+G
Sbjct: 85  QQRFTALQSGEVDVLTRNTTQTLTRDTTLGLIGAGVNYYDSQGVMVSKDLGVKSAKELNG 144

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI  A+ A RCDA+T D S L + +
Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T + P   VILP+  SK PL P + QGD +W+NIV W+  AM+ AEE GIT KN+++++
Sbjct: 205 TTLENPDNFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITSKNVDEMA 264

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K ++NP++QR LG+  +  +G+ LG+   W Y II+ +GNYGE+F+R LG  S +K+ RG
Sbjct: 265 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYTIIKQVGNYGEVFERTLGADSAMKLERG 321

Query: 326 YNALWSKGGLMYAPPIR 342
            NA +  GGLMY  P+R
Sbjct: 322 LNASYKDGGLMYGWPVR 338


>gi|124026134|ref|YP_001015250.1| extracellular solute-binding protein [Prochlorococcus marinus str.
           NATL1A]
 gi|123961202|gb|ABM75985.1| extracellular solute-binding protein, family 3 [Prochlorococcus
           marinus str. NATL1A]
          Length = 353

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 213/354 (60%), Gaps = 15/354 (4%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K          V +  L     T+   N+S L  IK R  L CG++  + GF+ +K++
Sbjct: 1   MIKKIMRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G ++G DVD C+A ++AI  D  KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S
Sbjct: 61  GTYQGLDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSS 120

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG ++ K+  IS +  L+  SICV +GTTTE  + D F++ ++ Y
Sbjct: 121 GGNGLTFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++ A Y   RC A T D S L A +     P EH+IL D++SK PLAPA  
Sbjct: 181 TPIKYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPKEHIILEDVLSKEPLAPASD 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGE 287
             D +  + + W  +++++AEE GIT+ NI++       +     ++RFLGID    +GE
Sbjct: 241 GQDQKLADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGID--GGLGE 298

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            +GL+ D+  ++I   GNYGE+++R+LG  SE+ IPRG N L+ KGG+  +PP 
Sbjct: 299 KIGLSNDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352


>gi|124022922|ref|YP_001017229.1| amino acid ABC transporter substrate-binding protein
           [Prochlorococcus marinus str. MIT 9303]
 gi|123963208|gb|ABM77964.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9303]
          Length = 349

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 137/350 (39%), Positives = 206/350 (58%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M + F   ++ L +L     S      S L  I KRG L CG++  + GF+ +  NG ++
Sbjct: 1   MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLG 115
           G DVD CRA+++A+  D +K+QY PL A ERF AL++ +ID+LSRNT   L R+     G
Sbjct: 61  GLDVDICRAMAAAVVGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L F P+ + DGQG ++ +  GI  +  L  ++ICV +GTTTE  L D F+   + Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +     P +H+IL  ++SK PLAPA + GD 
Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGL 291
              + + W  +A+  AEE GITQ+N++   +    +     ++RFLG+D    +G+ LGL
Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDA--GLGQKLGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+  ++IR  GNYGE+++R+LG  S + IPRG N  + +GGL+ APP 
Sbjct: 299 ADDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGLNRSYRQGGLLIAPPF 348


>gi|83858265|ref|ZP_00951787.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Oceanicaulis
           alexandrii HTCC2633]
 gi|83853088|gb|EAP90940.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Oceanicaulis
           alexandrii HTCC2633]
          Length = 353

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 132/343 (38%), Positives = 206/343 (60%), Gaps = 5/343 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           +          + F  S S   S+   + ++++RG L+CG++TGLVGFA+    G W GF
Sbjct: 13  RRLAKGAAAFALGFTVSHSDLDSVTSHMDEVQRRGVLRCGVDTGLVGFAQTDETGSWSGF 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+ CRA ++A  +DP + +++P    +RF A++  ++DIL RNT WTL R    G+ F 
Sbjct: 73  EVELCRAYAAAFLNDPDRAEFIPTTTLDRFRAVREGEVDILLRNTSWTLSRATLQGVRFA 132

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I Y+DGQGF+     G++S  +LSGA ICVQ  TT+ L L DY + + + +  +  E V
Sbjct: 133 GIYYYDGQGFLTPADLGLTSAQELSGARICVQPETTSALNLDDYAERYGLDFTIVSVETV 192

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   AY A +CDA+T D+S L   + +   P  H++LPD+ISK PL+P +   D  +  
Sbjct: 193 ADARTAYEAGQCDAFTSDVSRLAGFRRSLSEPDRHMVLPDVISKEPLSPVVRDDDDAFAM 252

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
            V W   +++ AEE G+TQ       + ++ P+V+R L +D+   +  +LGL  D+  + 
Sbjct: 253 AVEWVLTSLIAAEEYGVTQSQAASADQTSSRPEVRRLLEVDE--EVAASLGLENDFARQA 310

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   G+YGE+F+RNLG  S+L++ RG NA W +GGL+YAPP+R
Sbjct: 311 IAVGGHYGELFERNLGEASQLQLERGLNAQWKEGGLLYAPPVR 353


>gi|149925439|ref|ZP_01913703.1| probable amino acid-binding protein [Limnobacter sp. MED105]
 gi|149825556|gb|EDM84764.1| probable amino acid-binding protein [Limnobacter sp. MED105]
          Length = 343

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 153/336 (45%), Positives = 228/336 (67%), Gaps = 4/336 (1%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +  L  L   + +    +L  I KR  ++CG+++G+ GF+ + ++G W+G DV  CRA+
Sbjct: 11  LLGTLFCLLVANTAQAGPVLDAIYKRDAVRCGVSSGVAGFSALGSDGQWRGLDVAVCRAV 70

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++A+  D  K+Q+ PL++++RF ALQ+ QIDILSRNT WTL R+  L   F  ITY+DGQ
Sbjct: 71  AAAVLGDAQKVQFTPLSSQQRFAALQAGQIDILSRNTTWTLGRDAGLNAHFAAITYYDGQ 130

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           G +MHK+ G+ S  +L GA ICVQ+GTT E  L+ Y  +  +    IV++  E    A+ 
Sbjct: 131 GILMHKRFGVKSAKELKGAEICVQSGTTNEKNLSTYLGSQGITAKAIVYDNFEAAYKAFF 190

Query: 188 AHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           + RC A++ D+SAL  LK   + RP ++V+LP++ SK PL PA+++GD E++ IV W  +
Sbjct: 191 SGRCQAFSTDVSALIGLKSSQSGRPDDYVVLPEVFSKEPLGPAVLRGDDEFFAIVKWVVF 250

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
           AM+ AEELG+ + NI Q   +++NP VQR LG   + N+G+ LGL +DW  +I++ +GNY
Sbjct: 251 AMIEAEELGVGKGNIEQAL-NSSNPAVQRLLG--GAENLGKPLGLPRDWVVKILQQVGNY 307

Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GE+F+ NLG QS LK+ RG NALW++GGLMYAPP+R
Sbjct: 308 GEVFEENLGKQSPLKLERGLNALWTQGGLMYAPPLR 343


>gi|317404416|gb|EFV84833.1| extracellular solute-binding protein [Achromobacter xylosoxidans
           C54]
          Length = 338

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 143/340 (42%), Positives = 230/340 (67%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++ +   +   ++ +   +   ++KK+GF++CG++TG+ GF+   + G++KG DVD
Sbjct: 2   KVLKLAAIGTALFAASAAANAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++ +F D SK +  PLN ++RF ALQS ++D+L+RNT  TL R+ +LGL    + 
Sbjct: 62  LCRAVAATMFGDASKFKVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG ++ K   + S  +L+GA+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI
Sbjct: 122 YYDSQGVMVSKDLNVKSAKELNGATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEI 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A+ A RCDA+T D S L + + T + P +++ILP+  SK PL P + QGD +W+N++ 
Sbjct: 182 IRAFSAGRCDAFTTDKSQLASTRTTLENPDKYIILPEDFSKEPLGPMVRQGDEQWFNVIR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W+  AM+ AEE GIT KN+++++K +TNP++QR LG+  +  +G+ LG+   W Y II+ 
Sbjct: 242 WSLNAMLEAEEYGITSKNVDEMTK-STNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+  LG  S +K+ RG NA + +GGLMY  P+R
Sbjct: 299 VGNYGESFEATLGKSSAMKLERGLNASYKQGGLMYGWPVR 338


>gi|148239754|ref|YP_001225141.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 7803]
 gi|147848293|emb|CAK23844.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 7803]
          Length = 338

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 132/340 (38%), Positives = 205/340 (60%), Gaps = 8/340 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L  +    T     AS L  +++RG L+CG++  + GF+ +   G + G DVD C+A +
Sbjct: 1   MLVGLQACATLGEGGASRLDLVRQRGELRCGVSGKIPGFSFLDREGRYAGLDVDMCKAFA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126
           +A   D +K++Y PL A ERF AL++ +ID+LSRNT + L R+ S   G+AF P+ + DG
Sbjct: 61  AAFVGDANKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVAFAPVVFHDG 120

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           QG ++ +  GI  +  L   +ICV +GTTTE  L D F+A  + Y P+ ++ + ++ A Y
Sbjct: 121 QGLLVRRDSGIKRLEDLRNQTICVGSGTTTEQNLNDVFQAKGIPYKPVKYQDLNQLVAGY 180

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              RC A T D S L + +   ++P  H ILP+++SK PLAP    GD    + + W  Y
Sbjct: 181 LQKRCAAMTSDRSQLASARSGFEQPGNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240

Query: 247 AMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           A+VTAEE+GITQ N++    +   D +   ++RFLG++    +G  LGL  D+   +++ 
Sbjct: 241 ALVTAEEMGITQNNVDAKLQEAINDPSKTALRRFLGVE--GELGSKLGLPNDFVVSVLKA 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GNYGE+++R+LG QS + IPRG N L   GG++ APP +
Sbjct: 299 TGNYGEIYNRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338


>gi|300022607|ref|YP_003755218.1| extracellular solute-binding protein family 3 [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299524428|gb|ADJ22897.1| extracellular solute-binding protein family 3 [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 344

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 143/338 (42%), Positives = 213/338 (63%), Gaps = 3/338 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             ++I  ++  F     + AS++  I+KRG + CG++    GF+E+  +G WKGFDV+FC
Sbjct: 10  LILAIGSMVGGFCGPAWSEASLIDTIRKRGHVVCGVSERAPGFSEISGSGTWKGFDVEFC 69

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL++A+  +   +++L L   ++F AL+  +ID+L   T WTL R+  LG  F    Y+
Sbjct: 70  SALAAAVLGNKDSVKFLSLMPSDKFNALRDNEIDVLMGATSWTLTRDTELGARFVAALYY 129

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQGFI+ +   ISSV +LSGASICV  G+T    +ADYF A  M+Y  I  +R +E+  
Sbjct: 130 DGQGFIVPRNHSISSVLELSGASICVLPGSTDASAVADYFGARRMRYQLITSDRWDELVK 189

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            Y +  C   TGD+S L   +      ++ ++LP+ ISK PL PA+  G   W+ +V WT
Sbjct: 190 TYSSGGCTVLTGDLSLLAYERSRLANGADQMLLPEYISKEPLGPAVKVGRDSWFAVVRWT 249

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
           + A+V AEELGI   N+ ++ K + + DV+RFLG++   +IG  LGL +DW Y+++R +G
Sbjct: 250 YMALVAAEELGINSSNV-EMMKVSPSHDVRRFLGLEA--DIGAPLGLARDWAYQVVRQVG 306

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NY E+FDR LG  S LK+ RG N LW+KGGLMY+ P+R
Sbjct: 307 NYAEIFDRTLGQGSALKLDRGLNNLWTKGGLMYSVPMR 344


>gi|78184422|ref|YP_376857.1| extracellular solute-binding protein [Synechococcus sp. CC9902]
 gi|78168716|gb|ABB25813.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           CC9902]
          Length = 367

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 140/348 (40%), Positives = 206/348 (59%), Gaps = 11/348 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           +    ++  L+ L     + +      L  ++ RG L CG++  + GF+ +   G + GF
Sbjct: 21  RRLIGAVGGLVGLISGCATLSDGTSSRLDLVQSRGELLCGVSGKIPGFSFLSPEGRYAGF 80

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLA 117
           DVD C+A+++A   D +K+QY PL A ERF AL+S +ID+LSRNT  TL R+ +   GL+
Sbjct: 81  DVDICKAMAAAFVGDSAKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAAGGNGLS 140

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F P  + DGQG ++    G+ S++ LSG +ICV +GTTTE  L D F A  + Y PI ++
Sbjct: 141 FAPTVFHDGQGLMVSVGSGVRSIADLSGKAICVGSGTTTEQNLNDAFAAQGLPYTPIKYQ 200

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            + ++   Y   RC A T D S L + +     P +HVIL D +SK PLAPA++ GD   
Sbjct: 201 DLNQVVGGYLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVVGGDQRM 260

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS----KDTTNPDVQRFLGIDKSSNIGEALGLTK 293
            +  +W  YA++ AEE GITQ N++ V      D +   ++RFLG+D    +G  LGL  
Sbjct: 261 ADATNWVVYALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVD--GGLGAKLGLPD 318

Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           D+  ++IR  GNYGE+++R+LG  S + IPRG N L  +GGLM APP 
Sbjct: 319 DFVVQVIRATGNYGEIYNRHLGPGSAVTIPRGPNRLGVEGGLMIAPPF 366


>gi|302383029|ref|YP_003818852.1| extracellular solute-binding protein family 3 [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193657|gb|ADL01229.1| extracellular solute-binding protein family 3 [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 370

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 144/321 (44%), Positives = 212/321 (66%), Gaps = 4/321 (1%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +  L  IK+RG L CG+N GLVGFA     G+W+GFDVDFCR L++A+  DP  ++++PL
Sbjct: 52  SPTLVAIKRRGRLNCGVNQGLVGFAYTDNRGEWRGFDVDFCRGLAAAVVGDPDAVRFVPL 111

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +A+ RF AL+  ++D+L RNT WT+ R+    L+F  I Y+DGQGF++ +   ++S ++L
Sbjct: 112 SAENRFQALEDGRVDVLWRNTSWTMERDTGGRLSFAGINYYDGQGFLVRRALNLNSAAEL 171

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +GA IC+Q+G+T+ L + DYF++  ++Y  +V    E    AY    CDA++ D+SAL A
Sbjct: 172 NGARICLQSGSTSALNVEDYFRSRGIEYRAVVLPTEEAARQAYGREDCDAFSADVSALAA 231

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            + T    S+HVILPD+ISK PL P + +GD +W  IV WT  A+V AEELG+TQ N+  
Sbjct: 232 ARTTLGDSSQHVILPDVISKEPLGPVVRRGDEQWTAIVRWTQNALVLAEELGVTQANVED 291

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
            + +  +P V+R LG++     G  +GL+ DW    I  +GNYGE+F+RNLG+QS L + 
Sbjct: 292 QAAEARDPQVRRLLGVE--GEFGSRMGLSDDWARDAIAGVGNYGEIFERNLGSQSALDLA 349

Query: 324 RGYNALWS--KGGLMYAPPIR 342
           RG NA W+    GL+Y  P+R
Sbjct: 350 RGLNAQWNGRPAGLIYGLPVR 370


>gi|56697221|ref|YP_167586.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678958|gb|AAV95624.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
          Length = 337

 Score =  306 bits (783), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 138/318 (43%), Positives = 206/318 (64%), Gaps = 4/318 (1%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L D++  G L CG++ G+ GF+   + G W G D D CRA+++A   D + ++++PL 
Sbjct: 24  GKLDDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRAVAAATLGDANAVRFVPLA 83

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F  + Y+DGQGF++    G++S  +L 
Sbjct: 84  SKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDGQGFMVRADAGVTSARELD 143

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            A++C+  GTTTEL +AD+ +A+ +   P+VFE   E   AY + RCDA T D S L A 
Sbjct: 144 AATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAYASGRCDALTTDASQLAAF 203

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +     PSEH ILP+IISK PLAP +  GD +W +IV+W  Y ++TAEELG+TQ N+ ++
Sbjct: 204 RAGFADPSEHKILPEIISKEPLAPFVAHGDNQWKDIVTWVVYGLITAEELGVTQANVAEM 263

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +  +TNP++QR LG   S + G  LGL   W    I  +GNYGE++DRNL   + L + R
Sbjct: 264 TASSTNPNIQRLLGT--SGDTGGFLGLNSTWMVDTISAVGNYGEIYDRNL--TATLGLER 319

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG++YA P+R
Sbjct: 320 GVNALWTDGGILYAMPVR 337


>gi|88808790|ref|ZP_01124300.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. WH 7805]
 gi|88787778|gb|EAR18935.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. WH 7805]
          Length = 338

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 133/340 (39%), Positives = 207/340 (60%), Gaps = 8/340 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L  +    T     AS L  I++RG L+CG++  + GF+ ++ +G + G DVD C+A +
Sbjct: 1   MLFGLYACATLGEGGASRLDLIRQRGELRCGVSGKIPGFSFLERDGRYAGLDVDMCQAFA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126
           +A   D SK++Y PL A ERF AL++ +ID+LSRNT + L R+ S   G+ F P+ + DG
Sbjct: 61  AAFVGDSSKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVTFAPVVFHDG 120

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           QG ++ +  GI  +  L   +ICV +GTTTE  L D F+A  + Y P+ ++ + ++ A Y
Sbjct: 121 QGLLVRRNSGIKGLDDLRDKTICVGSGTTTEQNLNDVFQARGIAYKPVKYQDLNQLVAGY 180

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              RC A T D S L + +    +P+ H ILP+++SK PLAP    GD    + + W  Y
Sbjct: 181 LQGRCSAMTSDRSQLASARSGFAQPNNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240

Query: 247 AMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           A++TAEE+GIT+ N++    + + D +   ++RFLG+D    +G  LGL  D+   +++ 
Sbjct: 241 ALITAEEMGITKANVDVKLQEATSDPSKTALRRFLGVD--GELGSKLGLRNDFVVSVLKT 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GNYGE++DR+LG QS + IPRG N L   GG++ APP +
Sbjct: 299 TGNYGEIYDRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338


>gi|296536584|ref|ZP_06898665.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
 gi|296263094|gb|EFH09638.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
          Length = 323

 Score =  305 bits (781), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 220/326 (67%), Gaps = 7/326 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +    A  LG I+ RG + CG+    +GFA   + G ++G D D+CRAL+ A+F D  K
Sbjct: 4   ATAQPAADTLGAIRARGHVLCGVTPNTIGFAAPDSQGVFRGLDADYCRALAVAVFGDADK 63

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
            +++P  A +RF ALQS ++D+L R T WTL RE +LG  F  + ++DG GF++ +  G+
Sbjct: 64  ARFVPTTAPQRFPALQSGEVDVLIRTTTWTLSREAALGFVFAGVNFYDGNGFMVRRALGV 123

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S  QL GAS+C+Q G+TTEL + DYF+AH M+ +P+ +E VEEI  A+ A RCD Y+ D
Sbjct: 124 QSARQLDGASVCLQQGSTTELNVTDYFRAHGMRLNPVTYENVEEIRTAFAAGRCDVYSSD 183

Query: 198 ISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
            S L A +        + V+LP+IISK PL PA+ +GD  W++IV WTH+A++TAEELGI
Sbjct: 184 TSTLAAFRAGQGAAADQFVLLPEIISKEPLGPAVRKGDARWFDIVRWTHFALLTAEELGI 243

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           TQ N+ +   D+T+PDVQRFLG  +S ++G  LGL  DW  RI+  +GN+GEM++RN+  
Sbjct: 244 TQANLARF-ADSTSPDVQRFLG--RSGDLGRMLGLQPDWAARIVGQLGNFGEMWERNI-- 298

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            + + I RG NALW++GGL YAPP+R
Sbjct: 299 -TPMGIQRGINALWTQGGLQYAPPMR 323


>gi|119510485|ref|ZP_01629618.1| extracellular solute-binding protein, family 3 [Nodularia spumigena
           CCY9414]
 gi|119464907|gb|EAW45811.1| extracellular solute-binding protein, family 3 [Nodularia spumigena
           CCY9414]
          Length = 358

 Score =  305 bits (780), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 151/358 (42%), Positives = 226/358 (63%), Gaps = 19/358 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGL 44
           M +   +  +  +I   T+ +                        IK RG L CG++  +
Sbjct: 4   MRRSALILAIAPLIFAITACNNPGETTNTNNPNPGTQTTRNRWDAIKSRGQLICGVSGQI 63

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
            GF+ V+ +G + G DVD CRA+++A+FD+P  +++  L+A+ERF ALQ+ +ID+LSRNT
Sbjct: 64  PGFSFVETDGKYSGIDVDICRAIAAALFDNPDAVEFRNLSAQERFTALQTGEIDVLSRNT 123

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
            WTL R  ++GL F P+ ++DGQ  ++ K +GI+S++ +   +ICVQ+GTTTE  LAD  
Sbjct: 124 SWTLSRATAMGLEFAPVVFYDGQAIMVGKNRGINSLADMKDKAICVQSGTTTEQNLADQM 183

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           +  N+ Y PIVFE V    A Y   RCD  T D SAL + ++T   P  +VIL ++IS  
Sbjct: 184 RKRNITYKPIVFEDVNVTFATYAEGRCDGITADRSALVSRRITLPNPENNVILDEVISSE 243

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284
           PLAPA+ +GD+   + V+W  Y+++ AEELGI  +N+ Q    + +PD++RFLG +   N
Sbjct: 244 PLAPAVAKGDSVLGSAVTWVVYSLIKAEELGINSQNLGQF-ATSNDPDIKRFLGTE--GN 300

Query: 285 IGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GE LGLT D+  RI++H+GNYGE++DRNLG ++ L +PRG N L  +GGL+YAPP R
Sbjct: 301 LGEGLGLTNDFAARIVKHVGNYGEIYDRNLGPKTNLNLPRGQNQLGQQGGLLYAPPFR 358


>gi|33240126|ref|NP_875068.1| amino acid ABC transporter periplasmic protein [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
 gi|33237653|gb|AAP99720.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 350

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 140/351 (39%), Positives = 217/351 (61%), Gaps = 12/351 (3%)

Query: 1   MY-KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M  K FF  ++ L IL     ST   NAS L  IKKR  L CG++  + GF+ ++ +G +
Sbjct: 1   MKIKRFFSGMMTLSILLTGCASTGERNASRLQLIKKRNSLICGVSGKIPGFSFLETDGTY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--L 114
           +G D+D C+A ++A   D  ++QY PL A ERF A+++ +ID+LSRNT + L R+     
Sbjct: 61  QGLDIDICKAFAAAFIGDSKRVQYRPLTAAERFTAVRTGEIDLLSRNTTFNLSRDSIGGN 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           GL F P+ + DGQG ++ +   I+++  L+  SICV +GTTTE  + D F+A ++ Y PI
Sbjct: 121 GLTFAPVIFHDGQGLMVKRNSRINTIESLANKSICVGSGTTTEQNINDAFEAISLPYTPI 180

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++ + ++ A Y   RC A T D S L A +    +P +H+IL DI+SK PLAPA   GD
Sbjct: 181 KYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFPKPEDHIILNDILSKEPLAPASSGGD 240

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN----PDVQRFLGIDKSSNIGEALG 290
            +  + + W  +++++AEE GIT+ NI +  +   N      ++RFLG++   ++GE +G
Sbjct: 241 QKLSDAMRWVIFSLISAEEQGITKGNIKEKLQIAQNNPQMKSLRRFLGVE--GDLGEKIG 298

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           L  D+  ++I   GNYGE+++R+LG  SE+ IPRG N L++KGG+  APP 
Sbjct: 299 LANDFVVKVISSTGNYGEIYNRHLGINSEVPIPRGLNKLYNKGGVQIAPPF 349


>gi|33863169|ref|NP_894729.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635086|emb|CAE21072.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9313]
          Length = 349

 Score =  303 bits (776), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 136/350 (38%), Positives = 204/350 (58%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +     ++ L +L     S      S L  I KRG L CG++  + GF+ +  NG ++
Sbjct: 1   MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLG 115
           G DVD CRA+++A   D +K+QY PL A ERF AL++ +ID+LSRNT   L R+     G
Sbjct: 61  GLDVDICRAMAAAFIGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L F P+ + DGQG ++ +  GI  +  L  ++ICV +GTTTE  L D F+   + Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +     P +H+IL  ++SK PLAPA + GD 
Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGL 291
              + + W  +A+  AEE GITQ+N++   +    +     ++RFLG+D    +G+ LGL
Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDA--GLGQKLGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+  ++IR  GNYGE+++R+LG  S + IPRG N  + +GGL+ APP 
Sbjct: 299 VDDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGRNRSYRQGGLLIAPPF 348


>gi|254417720|ref|ZP_05031444.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3]
 gi|196183897|gb|EDX78873.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3]
          Length = 356

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 139/322 (43%), Positives = 203/322 (63%), Gaps = 4/322 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++  L  +K+RG L CG++ GLVGFA     G W+GFD DFCRA+++AIF D + ++++P
Sbjct: 37  DSPTLIAVKRRGRLNCGVHQGLVGFAYTDNRGQWRGFDADFCRAMAAAIFGDGNAVRFVP 96

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A +RF AL+  ++D+L RN+ WT+ R+   G  F  I Y+DGQGF++ +   ++S ++
Sbjct: 97  LSASDRFAALKEGRVDVLWRNSSWTMSRDAGEGFVFAGINYYDGQGFLVRRSLSLASATE 156

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+GA ICVQAG+T +    D+F++  + Y P+V    E    AY    CDA + DISAL 
Sbjct: 157 LNGARICVQAGSTAQANADDFFRSRGIAYRPVVLPSEEAARDAYGREDCDALSADISALA 216

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +        H IL D++SK PL P +  GD  W ++V WT  A+V AEE G+TQ+N  
Sbjct: 217 AARTVLADSQAHTILSDVVSKEPLGPVVRAGDERWADVVRWTLNAVVLAEEFGVTQENAE 276

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
            +SK + +P ++R LG +     G  LGL+ DW    I  +GNYG++FDRNLG+QS L +
Sbjct: 277 ALSKTSNDPRIKRLLGSE--GEYGALLGLSDDWAKDAILSVGNYGQIFDRNLGSQSPLDL 334

Query: 323 PRGYNALWSK--GGLMYAPPIR 342
            RG NA W+    GL+Y  PIR
Sbjct: 335 ARGLNAQWNARPAGLIYGLPIR 356


>gi|237807991|ref|YP_002892431.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
 gi|237500252|gb|ACQ92845.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
          Length = 342

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 159/345 (46%), Positives = 234/345 (67%), Gaps = 6/345 (1%)

Query: 1   MYK-DFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  +   +   + L     + + +   L ++KK+G+++CG+N GL GF+   A G W+
Sbjct: 1   MSKLKYLTGVASAVALLVAGNAQAASGDTLANVKKKGYVQCGVNDGLPGFSSPNAKGAWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD CRA+++A+F D SK++Y+PL  KERF ALQS ++DILSRNT WT+ R+ +LGL 
Sbjct: 61  GMDVDVCRAVAAAVFADASKVKYIPLGGKERFTALQSGEVDILSRNTTWTMTRDATLGLK 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               TY+DGQGF+++K  G+ S  +L GA+IC + GTTTE+ +ADYF A+ MKY P+VF+
Sbjct: 121 STATTYYDGQGFMVNKSLGVKSAKELDGATICTEGGTTTEMNMADYFNANKMKYTPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             ++    + + RCD  T D S L+A+++   +P +  +LP+IISK PL P + QGD  W
Sbjct: 181 NSDQTVKGFESGRCDVLTSDKSQLFAVRVKLAKPDDVAVLPEIISKEPLGPMVRQGDESW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             +V WT +AM+ AEELG++ KN+++++K + +PDV+R LG D     G  LG  KDW Y
Sbjct: 241 ELLVKWTVFAMINAEELGVSSKNVDEMAK-SGSPDVKRMLGYDAPD--GTTLGAVKDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNY E+FDRN+G  S LKI R  N LW+KGG +YAPP+R
Sbjct: 298 QIVKQVGNYAEVFDRNVGKDSPLKIVRTENNLWNKGGFLYAPPVR 342


>gi|116070918|ref|ZP_01468187.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           BL107]
 gi|116066323|gb|EAU72080.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           BL107]
          Length = 371

 Score =  302 bits (773), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 205/354 (57%), Gaps = 15/354 (4%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M++        ++  LI L     +        L  ++ RG L CG++  + GF+ +  +
Sbjct: 19  MFRPISSRLIGAVGGLIGLLCGCATLGDGTDSRLNLVQTRGELLCGVSGKIPGFSFLSPD 78

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + G DVD C+A+++A   D +K+QY PL A ERF AL+S +ID+LSRNT  TL R+ +
Sbjct: 79  GRYAGLDVDVCKAMAAAFVGDSTKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAA 138

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL+F P  + DGQG ++    G  S++ LSG +ICV +GTTTE  L D F A  + Y
Sbjct: 139 GGNGLSFAPTVFHDGQGLMVSVGSGARSMADLSGKAICVGSGTTTEQNLNDAFAAQGLPY 198

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++   Y   RC A T D S L + +     P +HVIL D +SK PLAPA++
Sbjct: 199 TPIKYQDLNQVVGGYLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVV 258

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS----KDTTNPDVQRFLGIDKSSNIGE 287
            GD    +  +W  YA++ AEE GITQ N++ V      D +   ++RFLG+D    +G 
Sbjct: 259 GGDQRMADATNWVVYALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVD--GGLGA 316

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            LGL  D+  ++IR  GNYGE+++R+LG  S + IPRG N L   GGLM APP 
Sbjct: 317 KLGLPDDFVVQVIRATGNYGEIYNRHLGPGSAVTIPRGPNRLGRDGGLMIAPPF 370


>gi|163793102|ref|ZP_02187078.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [alpha proteobacterium
           BAL199]
 gi|159181748|gb|EDP66260.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [alpha proteobacterium
           BAL199]
          Length = 346

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 200/325 (61%), Gaps = 4/325 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S   S L  +K RG L+C + T   G+  +   G W GFD + CRA+S+AIF DP KI+
Sbjct: 24  ASAQQSTLDIVKSRGHLRCQLGTPAPGWYMLSDTGKWSGFDYENCRAVSAAIFGDPDKIE 83

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              + +  RF A+ + + D+LSR T WTL RE  LGL F  ++++DGQGF++ K  GI S
Sbjct: 84  VQSVTSAVRFTAMANGESDMLSRTTTWTLFRETQLGLDFTTVSFYDGQGFMVLKDAGIKS 143

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L GA++CV  GTTTEL L DY + + +   P+VFE     D  +    CDA T D S
Sbjct: 144 ALELKGATVCVATGTTTELNLTDYSRTNGLDIKPVVFEDSNVRDNTFFTGGCDAITNDKS 203

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           +L + +      S   ILP+ ISK PL P + Q D++W +IV W+ Y M+ AEE G++  
Sbjct: 204 SLASTRAKAPDVSIFKILPETISKEPLGPVVRQNDSQWKDIVQWSVYTMIAAEEYGMSST 263

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+++V  +TTNP+++R LG +   ++ + LGL   W Y II+ +GNYGE ++  +G ++ 
Sbjct: 264 NVDKVLAETTNPEIKRMLGAE--GDLNKGLGLEPKWAYNIIKMVGNYGENYEEFMGEKTV 321

Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342
           + IPR    NALW+KGGL+Y+PP R
Sbjct: 322 MNIPRDGSPNALWTKGGLLYSPPFR 346


>gi|116072941|ref|ZP_01470203.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9916]
 gi|116068246|gb|EAU73998.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9916]
          Length = 349

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 138/351 (39%), Positives = 205/351 (58%), Gaps = 11/351 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+      +L  +++     +     AS LG I++R  L+CG++  + GF+ ++ NG + 
Sbjct: 1   MHFRTLSGLLAGVLMLQGCATLGEGGASRLGLIQQRKSLRCGVSGKIPGFSFLRPNGSYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115
           G DVD C+A ++A   D + ++Y PL A ERF AL++ +ID+LSRNT + L R+ +   G
Sbjct: 61  GLDVDLCKAFAAAFVGDATAVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDAAGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           ++F P+ + DGQG I+ K  GI  ++ L   SICV +GTTTE  L D  +A  + Y PI 
Sbjct: 121 VSFAPVVFHDGQGLIVKKTSGIRQLTDLRNQSICVGSGTTTEQNLNDALEAQGIAYTPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +     P EHVIL  ++SK PLAP  + GD 
Sbjct: 181 YQDLNQVVAGYLQDRCSAMTSDRSQLAAARSGFANPQEHVILNAVLSKEPLAPLSVGGDQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN----PDVQRFLGIDKSSNIGEALGL 291
              + + W  YA++TAEELG+TQ N+ +      N      ++RFLG+D    +G  LGL
Sbjct: 241 RLGDAMRWVVYALITAEELGLTQANVQERLAKAQNNPQMTQLRRFLGVD--GELGTKLGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             D+  R+I   GNYGE+++R+LG  S + IPRG N L   GG M APP +
Sbjct: 299 APDFVVRVIEATGNYGEIYNRHLGPDSAVPIPRGLNQLHRDGGAMTAPPFQ 349


>gi|309791547|ref|ZP_07686046.1| extracellular solute-binding protein [Oscillochloris trichoides
           DG6]
 gi|308226407|gb|EFO80136.1| extracellular solute-binding protein [Oscillochloris trichoides
           DG6]
          Length = 404

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 131/338 (38%), Positives = 204/338 (60%), Gaps = 9/338 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69
             ++   T    ++ +L  +K RG L CG N  L GF       G W GFDVDFCRAL++
Sbjct: 70  LTVVAEATPTPASSGLLERVKARGKLICGTNADLPGFGFYDNVRGRWSGFDVDFCRALAA 129

Query: 70  AIFDDPSKIQYLPLN---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           AIF D   ++++ LN     ERF +++S ++D+L RNT WTL R+    LAF P T+ DG
Sbjct: 130 AIFADADAVEFVALNTSGQNERFESVRSGKVDVLFRNTTWTLGRD-LSQLAFGPTTFHDG 188

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           Q F++     I+S++ L+G  ICV  GTT+   L+D F A  + +  ++++   ++  AY
Sbjct: 189 QTFMVRTASQITSLNDLAGKKICVSRGTTSAQNLSDDFAARGIVFEQVLYDDENQLYPAY 248

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               CDA T D S L + + T +RP +H IL + IS+ PL PA I+ D +W ++V+W  +
Sbjct: 249 DQGACDAVTSDSSQLASKRQTLERPEDHTILGERISREPLGPAFIEHDEQWRDVVTWVVF 308

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
           A + AEEL + Q N+ Q+  ++T+P V+R LG++   + G +LGL  D+ Y+IIR +GNY
Sbjct: 309 ATMYAEELRVDQTNVEQMKANSTDPRVRRLLGLE--GDFGTSLGLNNDFGYQIIRLVGNY 366

Query: 307 GEMFDRNLGNQSELKIPRGYNALWS--KGGLMYAPPIR 342
            ++++RNLG  +   + RG N  W+   GG++ +PP R
Sbjct: 367 ADIYNRNLGPTTPFAMDRGPNKAWNLGAGGVLASPPFR 404


>gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
 gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
          Length = 678

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 133/318 (41%), Positives = 196/318 (61%), Gaps = 2/318 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L       +  + +A  L D+++RG L+C ++TGL GF+    NG W+GFD
Sbjct: 1   MKKMILPVALGAAFAATSLSAASAGTLEDVQERGKLRCAVSTGLAGFSYTDENGKWQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA+++A+  D   +++ P   K RF AL S ++DILSRNT WT  R+  L   F  
Sbjct: 61  VDYCRAVAAAVLGDADAVEFSPTTGKTRFTALASGEVDILSRNTTWTFSRDADLKFTFLG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL L+DYF A  M Y P+  E   
Sbjct: 121 VSYYDGQGFMVKKSLGVASAKELDGATVCIQTGTTTELNLSDYFTAEGMSYEPLSIETNT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  A Y A  CD YT D S L A + T +   +H++LP+IISK PL P +  GD +W +I
Sbjct: 181 EGRANYLADACDVYTTDASGLAASRATFENADDHIVLPEIISKEPLGPLVRHGDDQWADI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A+  AEE GIT  N ++++ ++ +P+V R LG   S  +G ++GL  D+    I
Sbjct: 241 GRWVLNALKIAEEKGITAANADEMAANSKDPEVLRLLGA--SGEMGASVGLGNDFALVAI 298

Query: 301 RHMGNYGEMFDRNLGNQS 318
           + +GNYGE+F+R+LG Q+
Sbjct: 299 KAVGNYGEVFERHLGTQT 316


>gi|317407537|gb|EFV87488.1| extracellular solute-binding protein, family 3 [Achromobacter
           xylosoxidans C54]
          Length = 329

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 123/331 (37%), Positives = 192/331 (58%), Gaps = 5/331 (1%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
              +      TN+  +  I+ RG++ CG   G  GF+    +G+WKG DVD CRA++ A+
Sbjct: 2   ASPVAAAVTQTNSPTVDQIRARGYVICGSGHGTTGFSAPDKDGNWKGLDVDTCRAIAIAV 61

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             D SK +++PL  ++R  ALQ+ QID+L R T WTL R+ + G+ F    Y++   F++
Sbjct: 62  LGDASKTRFVPLTGQQRLTALQTGQIDVLPRTTSWTLRRDAN-GINFTYPNYYEYDAFMV 120

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  GI+    ++GA+ICVQ G+T E+T+AD  +   +    ++F+ V     A+ + RC
Sbjct: 121 RKDLGITQTKDMNGATICVQTGSTNEVTVADLSRKFKLGLKTVLFDNVAASRQAFFSGRC 180

Query: 192 DAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           D    D SAL A++      P ++VI P       L P++  GD  W++IV W     + 
Sbjct: 181 DGLITDASALAAVRATQAQNPDDYVIFPASGHSEALTPSVRHGDDRWFDIVKWVIQVPIA 240

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           AE++GITQ N++ + K + +P + RFLG +     G+ALGL + W Y I++ +GNYGE+F
Sbjct: 241 AEDMGITQANVDDMLK-SDDPRIARFLGKEP--GNGKALGLDERWAYNIVKQLGNYGEIF 297

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           +RN+G  S +K+ RG N L+  GGLMY    
Sbjct: 298 ERNVGKNSPMKLERGMNRLYRDGGLMYPYVF 328


>gi|150397299|ref|YP_001327766.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150028814|gb|ABR60931.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 343

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 194/343 (56%), Gaps = 7/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     ++      L  T+   +AS+L  +K+RG L CG +    GF  +    G  +G 
Sbjct: 1   MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFCRA+++A+  D SK++++ +  K RF A+ + Q+D++  +T     RE S+ + F 
Sbjct: 61  DVDFCRAVAAAVLGDASKVKFVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFER 178
           P+ ++DG G ++     +   + L GA+ C   G+ TE  L   FKA+  +    + +E 
Sbjct: 121 PVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETVLTSAFKANGWQGSKVLTYEN 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +E++ AA  + RC+A + D SAL A    + +PS+++ILP+ + KSP A  +   D++W 
Sbjct: 181 LEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N + W  Y +  AEE  ITQ N+ +  K + +P VQ+FLG+      G+  GL  D+  +
Sbjct: 241 NALRWITYGLFQAEESDITQANLEEKLK-SDDPFVQKFLGV--GGGYGKDFGLPDDFVAQ 297

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339
            I+ MGNYGE++ RNLG  + + + R    NALW++GG +Y+P
Sbjct: 298 AIKAMGNYGEIYARNLGPDTSMFLDRKGTPNALWTEGGAIYSP 340


>gi|190891654|ref|YP_001978196.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190696933|gb|ACE91018.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 343

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 198/343 (57%), Gaps = 7/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M    F++      + FT+ + +AS+L  +K+RG L CG +    GF  +    G  +G 
Sbjct: 1   MKLLKFLTAGVFAGVAFTAANASASVLDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFC+A+++ +  D SK++++ +  K RF A+ + Q+D++  +T     RE S+ + F 
Sbjct: 61  DVDFCKAVAAGVLGDASKVKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178
           PI ++DG G ++    GI   + L GA+IC   G+ TE  LA  FKA   K    + +E 
Sbjct: 121 PINFYDGTGLMVKTDAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYEN 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +E++ +A  + RC+A + D SAL A      +P++++ILPD + KSP    +   D++W 
Sbjct: 181 LEKLFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVAANDSKWR 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N + W  Y +  AEE  ITQ N+ +  K + +P +Q+FLG+      G+  GL+ D+  +
Sbjct: 241 NALRWIEYGLFQAEESEITQANLAEKLK-SEDPFIQKFLGV--GGGYGKDFGLSDDFIAQ 297

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339
            I+ +GNYGE +DRNLG  +++ + R    NALW++GG +Y+P
Sbjct: 298 AIKAVGNYGEAYDRNLGPTTKMYLDRKGTPNALWTQGGAIYSP 340


>gi|323136410|ref|ZP_08071492.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
 gi|322398484|gb|EFY01004.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
          Length = 345

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 153/346 (44%), Positives = 217/346 (62%), Gaps = 10/346 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           + FF+++   ++    +             L +I KRGF+ CG+     GFAE     +W
Sbjct: 4   RRFFLAVALAVMCALAAAQDAEAQIEIGPTLSEILKRGFVICGMTEAD-GFAEPLDGNEW 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDVD CRAL+SAIFDDP+K+ Y  L AKER  +LQ   +D+L+    WT  R+    +
Sbjct: 63  RGFDVDICRALASAIFDDPTKVMYSALPAKERAASLQGNWVDLLASGAPWTQSRDTGQRI 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            +  ++ +DGQ F++ +++  +S   LSG S+CVQ GT+ ELTLAD+F      Y P  F
Sbjct: 123 IYAGVSLYDGQTFLVRRQRSFASARDLSGVSVCVQRGTSYELTLADFFNVRKAPYEPRAF 182

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E  EE  A Y A +CDA T D S LYA +     P++H +LPD++SK+P  P + QGD +
Sbjct: 183 ETFEEAAAGYEAGKCDALTADASMLYAARAKFASPADHAVLPDMLSKAPRGPVVRQGDDQ 242

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W NIV WT YAM+ AEEL ++  N +   K + NPD++R +G+D   ++G  LGL K+W 
Sbjct: 243 WLNIVRWTLYAMINAEELQVSILNADLALK-SENPDIRRLVGVD--GDLGAGLGLAKNWA 299

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +RII+H+GNYG+MFDRNLG  + + + R  NALWS GGLMYAPP+R
Sbjct: 300 FRIIKHIGNYGDMFDRNLGPATPMAMDRRINALWSNGGLMYAPPVR 345


>gi|83591779|ref|YP_425531.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83574693|gb|ABC21244.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 364

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 190/351 (54%), Gaps = 17/351 (4%)

Query: 6   FVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
              +L +     +               +     L  +++RG+L CG+N  L G   V  
Sbjct: 15  LAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDP 74

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G W+GFD+D+CRA+++A   D  +++++PL+ + R LAL S ++D+LSRNT WTL R+ 
Sbjct: 75  DGVWRGFDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDA 134

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKY 171
             G++F  ++ FDG G +  K      ++ L     +CVQ+  T    L     A  + +
Sbjct: 135 GQGISFVGVSLFDGPGLLAWKDLPGDDLASLPPTARLCVQSAATAARVLPARMAAAGLSF 194

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAI 230
             + F  +EE   A     CD Y  D +AL +L      RP    +LPD+++  PL PA+
Sbjct: 195 TILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRLLPDLLAVEPLGPAV 254

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
             GD  W++I  WT +A++ AEE G++   +  V + T +P+++RFLG+D    +G  LG
Sbjct: 255 RDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDP--GVGAPLG 312

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           L   W  RI+  +G YGE+FDRNLG  S LK+ RG NAL   GGLM APP 
Sbjct: 313 LDDAWVRRIVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPPF 363


>gi|296536952|ref|ZP_06898974.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Roseomonas cervicalis ATCC 49957]
 gi|296262721|gb|EFH09324.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Roseomonas cervicalis ATCC 49957]
          Length = 338

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 137/344 (39%), Positives = 217/344 (63%), Gaps = 8/344 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +     +   ++    +   + S  L  ++ RG L CG++    GFA   + G+ +G 
Sbjct: 1   MLRTMLSCLAATLLASAAAAQGSGSPTLDAVRARGQLACGVSGTNPGFALADSRGEMRGS 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + DFCRA+++A   D  +++++ L +  RF ALQS +ID+L R   W+L RE SLGL F 
Sbjct: 61  EADFCRAVAAATLGDAGRVKFVVLTSTNRFTALQSGEIDLLVRTATWSLGREASLGLLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            IT+ DG  F++H   G+ S ++L GA+IC+  GTTTEL + DYF+   M++ P++ + V
Sbjct: 121 GITFHDGTAFMVHAASGVRSAAELDGATICILPGTTTELAVTDYFRRGGMRFTPVLIDNV 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E+ AA+R+ RCD+Y+ D SAL + +        ++ +LP++ISK PL P + +GD +W+
Sbjct: 181 TELRAAFRSGRCDSYSSDASALASFRFGEGAGAGQYALLPEVISKEPLGPLVRKGDDKWF 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           +IV WTH+AM+ AEELGI   +       + NPD++R LG+D   ++G A+GL   W + 
Sbjct: 241 DIVRWTHFAMLAAEELGIRGADAEAALA-SPNPDIRRLLGVD--GDLGRAMGLDNRWAFN 297

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+R +GNY E++DRN+   + L +PRG+N +W++GGL YAPPIR
Sbjct: 298 ILRQVGNYAEVWDRNI---APLGVPRGHNRIWTQGGLQYAPPIR 338


>gi|301166613|emb|CBW26189.1| General L-amino acid substrate binding protein [Bacteriovorax
           marinus SJ]
          Length = 347

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 142/342 (41%), Positives = 206/342 (60%), Gaps = 11/342 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + L L  L +      AS + +IKKRG L CG++ GL GF+     G+WKGFD
Sbjct: 17  MK--IIFTFLLLTSLSW------ASTISEIKKRGHLNCGVSEGLTGFSIPNEKGEWKGFD 68

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD C+A++ AIF+D  K++++P +  ERF +L  KQIDILSRNT  T  RE++  + F P
Sbjct: 69  VDICKAIAVAIFNDTQKVKFIPTSLGERFNSLAKKQIDILSRNTSRTFSREVTRDIEFAP 128

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + YFD QG ++ K+  I  +  L    ICV+  TTT+  L DYFK HN++   + F+  +
Sbjct: 129 VVYFDTQGILVSKRSKIKKIKDLDNKKICVKNNTTTQQNLIDYFKHHNLRLRQVRFDNND 188

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++   +   RC A T D++ L + K          +L + I K PLAP I+ GD  W N+
Sbjct: 189 QLVLGFLKKRCIALTSDVTTLISEKNHFQNSKSFTLLSERIEKEPLAPVILSGDRRWKNL 248

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y+++ AEELG++  NI  + K + +P V+RF G  +  N  + LG++  WT  II
Sbjct: 249 VDWTIYSLIWAEELGVSSSNIEAM-KTSADPRVKRFFG--EGFNFEKMLGVSNGWTGNII 305

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNY E+F RNLG  S LKIPRG N+LW  GG++Y+PP++
Sbjct: 306 SKIGNYSEVFHRNLGRDSNLKIPRGLNSLWKDGGILYSPPMK 347


>gi|87119292|ref|ZP_01075190.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
 gi|86165683|gb|EAQ66950.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
          Length = 344

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 11/346 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K      L ++     S +       S L  + +RG L CG+       + +   G W+
Sbjct: 5   KKTSLYLTLFILSFSTLSQAAQIIKPNSTLTQVIQRGDLNCGVFPDDPSRSAINLEGQWQ 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF VDFCRA ++A+  D   + Y+ + A  RF  L   + D++  ++ WT  RE    L 
Sbjct: 65  GFYVDFCRATAAAVLKDQEFVNYIEVGATTRFSTLVELKTDVVMYSSTWTHSREFQYQLD 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  +  FDGQGFI+     I +++ L   ++CV   T+T   L D  ++  +K   +   
Sbjct: 125 FPAVYLFDGQGFIVRAATNIQTINDLDNKTVCVTQNTSTHQNLVDLIESRELKTKILFSN 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                   +R   CDAYT D   L   +    D+P  + +LPD IS+ P+ P +   D +
Sbjct: 185 GDS----FFRGGPCDAYTADRMNLATNRANRTDKPENYRLLPDTISREPIGPMVRNDDAQ 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W  I+    +A++ AEE  I   N++Q    + N +VQ  LG  K   IG+ LGL   W 
Sbjct: 241 WSRIIRAVVHALILAEEKNINAANVDQALTQSKNAEVQNLLG--KKGEIGQQLGLDNQWA 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           YR I+ +GNYGE+++R+ G+ S++ + RG N  W++GG++YAP  +
Sbjct: 299 YRAIKAVGNYGEVYNRHFGSHSKIGVKRGINQPWNQGGILYAPIFK 344


>gi|261752067|ref|ZP_05995776.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261741820|gb|EEY29746.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 277

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 154/273 (56%), Positives = 204/273 (74%), Gaps = 3/273 (1%)

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
           F DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++
Sbjct: 6   FGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65

Query: 132 --HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + 
Sbjct: 66  NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V WTH A++
Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +GNYGE+
Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277


>gi|87124569|ref|ZP_01080418.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9917]
 gi|86168141|gb|EAQ69399.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9917]
          Length = 343

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 133/333 (39%), Positives = 196/333 (58%), Gaps = 8/333 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T     AS L  I++RG L+CG++  + GF+ ++ +G + G DVD C+A ++A   + 
Sbjct: 13  CATLGEGGASRLDLIRQRGSLRCGVSGKIPGFSYLQTDGRYFGLDVDLCKAFAAAFVPET 72

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHK 133
             + Y PL A ERF AL++ +ID+LSRNT   L R+ +   GL+F P+ + DGQG ++  
Sbjct: 73  GAVDYRPLTAPERFTALRTGEIDLLSRNTTMNLSRDAAGGNGLSFAPVVFHDGQGLMVSS 132

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI  +  L G SICV +GTTTE  L D F+A  + Y PI ++ + ++ A Y   RC A
Sbjct: 133 GSGIKRLEDLQGKSICVGSGTTTEQNLNDAFEARGIAYTPIKYQDLNQVVAGYLQGRCQA 192

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            T D S L A +        H IL +++SK PLAPA + GD    + + W  YA++TAEE
Sbjct: 193 MTSDRSQLAAARSGFADQRNHRILEEVLSKEPLAPASVGGDQRLADAMRWVVYALITAEE 252

Query: 254 LGITQKNINQVSKDTTNP----DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
           LGITQ N+ +   +         ++RF G++    +GE LGL  D+  ++I+  GNYGE+
Sbjct: 253 LGITQANVQERYAEAQRRPELTRLRRFFGLNA--GLGETLGLRDDFVVQVIQATGNYGEI 310

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + RNLG  S++ IPRG N L   GG+M APP +
Sbjct: 311 YARNLGPDSQVPIPRGLNRLGRDGGVMVAPPFQ 343


>gi|209549223|ref|YP_002281140.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534979|gb|ACI54914.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 344

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 198/343 (57%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     +       + FT+   +ASIL  +K+RG L CG +    GF  +    G  +G 
Sbjct: 1   MTLLKILIAGVFAGMAFTATHASASILDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFC+A+++++  D +KI+++ +  K RF A+ + Q+D++  +T     RE S+ + F 
Sbjct: 61  DVDFCKAVAASVLGDAAKIKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178
           PI ++DG G ++    GI   + L GA+IC   G+ TE  LA  FKA   K    + +E 
Sbjct: 121 PINFYDGTGLMVKADAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYEN 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +E+  +A  + RC+A + D SAL A      +P++++ILPD + KSP    ++  D++W 
Sbjct: 181 LEKFFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVVANDSKWR 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N + W  Y +  AEE GITQ N+ +  K + +P VQ+FLG +     G+  GL+ D+  +
Sbjct: 241 NALRWIEYGLFQAEESGITQANLAEKLK-SEDPFVQKFLGSNG-GGYGKDFGLSDDFIAQ 298

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339
            I+ +GNYGE +DRNLG ++++ + R    NALW++GG +Y+P
Sbjct: 299 AIKAVGNYGEAYDRNLGPKTKMYLDRKGTPNALWTQGGAIYSP 341


>gi|260757721|ref|ZP_05870069.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str.
           292]
 gi|260761546|ref|ZP_05873889.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260668039|gb|EEX54979.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str.
           292]
 gi|260671978|gb|EEX58799.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 277

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 153/273 (56%), Positives = 203/273 (74%), Gaps = 3/273 (1%)

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
           F DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++
Sbjct: 6   FGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65

Query: 132 --HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + 
Sbjct: 66  NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V WTH A++
Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +GNYGE+
Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277


>gi|144898062|emb|CAM74926.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 340

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 197/346 (56%), Gaps = 10/346 (2%)

Query: 1   MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++ L    LI    T     A  L ++  RG ++CG++        +  NG W 
Sbjct: 1   MLKRIAIAALTALPLIAGLTTPPQARAGTLEEVTARGVIRCGVSEYGPALTAMNENGQWA 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  DFCRA ++A   +   + ++ +++ +RF AL+ K +D+LS  + WT  R+   GLA
Sbjct: 61  GFYTDFCRAFAAATLGNARAVDFVSVSSLDRFEALRQKAVDVLSEASTWTSERD-LGGLA 119

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   +  DGQGF++ +  GIS + QL G  ICV +  T+   L    K  N+ +    + 
Sbjct: 120 FPATSMMDGQGFLVRRDGGISGLDQLKGRRICVISHATSVGGLNRVNKVRNLGFKIQEYS 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTE 236
            ++   AA+   +CDA + D   L +L+      P+++V+LP+ I++ PL+P +++ D  
Sbjct: 180 SIQGSFAAFFDRQCDAVSTDGIILASLRQQLAPNPADYVLLPERITREPLSPVVLKNDRR 239

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W +I+ WT  A + AEELGIT  N+ Q   ++T+P+++R LG+D   ++G  LGL K W 
Sbjct: 240 WEDIIRWTILATIAAEELGITSANVKQHL-NSTDPEIRRLLGLD--GDMGARLGLDKAWA 296

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            R+I  +GNYGE+++RNL     L + RG NAL S+GG++++PP R
Sbjct: 297 MRVIEQVGNYGEIYNRNL--TKVLGLERGQNALSSQGGILWSPPFR 340


>gi|110347225|ref|YP_666043.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110283336|gb|ABG61396.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 340

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 6/344 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +    ++L         SI   +++RG++ CG + G+ G +     G W GFD
Sbjct: 1   MKRVTQFAAAAAMVLIGAGSVNAQSITDKVRQRGYVSCGASQGVPGLSRPDDKGVWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A F D  K Q++PLNA +R  A+Q+ ++D+L+R T WT  R++   + F  
Sbjct: 61  VDSCRAVAAAFFGDSQKAQFVPLNAAQRIPAVQTGEVDVLARTTTWTYTRDV--AVRFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
           I   DG   ++ K   + + + L G +IC+Q G +      D  +  N  K   + F+  
Sbjct: 119 INLVDGDAIMLRKSLNVGAAADLEGLTICLQGGGSLVENALDLIEQQNQVKVERVYFDST 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                AY   RCD Y  D  A+   +      P EH I     +  PLA AI +GD  W+
Sbjct: 179 ILARDAYFGGRCDGYMSDGFAIAGQRAAVASNPDEHAIFQSGATTEPLALAIPRGDDRWF 238

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           +IV +   AMV AE+ GIT KN+++++   T+ + ++ LG++    IGE L L   W Y 
Sbjct: 239 DIVRYAFNAMVWAEDRGITSKNVDEIAASATDGETRKALGVEP--GIGEPLKLDDKWIYN 296

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I+ +GNYGE+F RNLG +S LK  R  NAL   GG+++  P +
Sbjct: 297 VIKQVGNYGEVFARNLGEESPLKAERRLNALPRDGGILFPIPFK 340


>gi|319782291|ref|YP_004141767.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168179|gb|ADV11717.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 344

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 196/339 (57%), Gaps = 3/339 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGF 59
           M        L L+     + +     L  +K RG L C G +   +GFAEV   G+WKG 
Sbjct: 4   MKWGAAAMALGLVHFAAPAEAAGGKTLEAVKARGVLNCTGHDGSYLGFAEVDDKGNWKGM 63

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D CRA+++A+  DP+K++ +P++  +R+ +LQS  +DI+ + +  TL R+  LGL F 
Sbjct: 64  DIDLCRAVATAVLGDPAKLKVVPISWAQRWPSLQSGDVDIIIKASGGTLSRDTELGLQFS 123

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y      + HK+  + S+   +G +IC+ AGT+ E  +A Y     +K  P++ E+ 
Sbjct: 124 MSYYLGTTKVMAHKELNLKSLKDAAGGTICIPAGTSQEQQVAAYTAKLGIKLEPVLIEKT 183

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE++ AY + RCD Y      L   ++   +  +HVILPD+++  P    + QGD  W +
Sbjct: 184 EELEQAYFSGRCDLYAQWGPTLAIARIAKSKVDDHVILPDVLAVEPEVMIMRQGDDNWVD 243

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           I +WT   ++ AE+ GIT KN+++V    T+P V +FLG+  +  +G+ LGL  DW Y++
Sbjct: 244 IANWTLSTLIFAEQEGITSKNVDEVKAKPTSPQVAKFLGV--TPGMGKGLGLDDDWAYKV 301

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYA 338
           I+++GNYGE+F+R+LG  S  K+ R    LW+ GG+++ 
Sbjct: 302 IKNVGNYGEIFERDLGKDSPYKMDRELTNLWNNGGVLFP 340


>gi|170690235|ref|ZP_02881402.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170144670|gb|EDT12831.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 345

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 136/339 (40%), Positives = 192/339 (56%), Gaps = 6/339 (1%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                L L  +   S + +   L  +K RG L+CG++ G+ GF+   A G W G DVDFC
Sbjct: 12  LLGLWLSLASVPSISNAADGEALASVKTRGVLRCGVSEGVAGFSSQDAAGQWSGIDVDFC 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RAL++A   D  K+ ++PL A ERF AL++++ID+LSRNT WTLLRE +L   F  + ++
Sbjct: 72  RALAAAALGDSRKVAFVPLKASERFPALETRRIDVLSRNTTWTLLREGALKAQFAGVLFY 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D Q F++           L GA++CVQ  T+T   L  Y  A      P+V    +E   
Sbjct: 132 DNQAFMVPAASASQLAGALKGATVCVQKDTSTLSHLIAYSDASGADIKPLVAGSADEARR 191

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A+ A RC AYT D S L AL L     S+   ILP+ ISK PL P +  GD  W  +V W
Sbjct: 192 AFFAGRCAAYTADASYLAALLLHAPGGSQAFAILPERISKEPLGPVVRGGDQAWLTLVRW 251

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
               ++ AEE+ +T++N+    ++ +   V R L  D +  +   +G+   WT R +  +
Sbjct: 252 VLLTLIAAEEMDVTRENLEIRLRNPS---VSRALVPDDT--VTRTIGVEPGWTVRALESV 306

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYG+MFDRN+G  S L + RG N LW++GGLMYAPPIR
Sbjct: 307 GNYGQMFDRNVGAHSPLGLARGTNDLWTRGGLMYAPPIR 345


>gi|103487895|ref|YP_617456.1| extracellular solute-binding protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977972|gb|ABF54123.1| extracellular solute-binding protein, family 3 [Sphingopyxis
           alaskensis RB2256]
          Length = 365

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 124/324 (38%), Positives = 195/324 (60%), Gaps = 6/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  I+ RG L C I+TG +G + +   G W+GF VD+CRAL++A+  D  K++
Sbjct: 47  AAAKGSTLARIRARGTLNCAIHTGQLGMSYLDKRGRWQGFFVDYCRALAAAVLGDARKVR 106

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++P+ + +RF  +Q+ + D+LSR T WTL R+  LG+ F    Y+DGQ F++ ++ G+  
Sbjct: 107 FMPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRRSGVRL 166

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI- 198
            + L GASIC+  GTT+EL  A+YF+   +++  +VFE  EE   A+ A RCDA T D  
Sbjct: 167 PTDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAF 226

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           +           P ++V+LP+ ++K P+ P +   D +WY I  W   A+  AEE+G+T+
Sbjct: 227 TLTVIRLADTAHPDDYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTR 286

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N  ++   + +P+V++ LG       G++LGL  DW YR I   GNYGE+FDR++   +
Sbjct: 287 ANAARMRMASRDPEVRKMLG--GLPGFGKSLGLDDDWAYRAIEATGNYGEIFDRHI---T 341

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            L + RG N L+  GGL+Y  P+R
Sbjct: 342 PLGVERGQNKLYRDGGLIYPLPMR 365


>gi|260545549|ref|ZP_05821290.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260096956|gb|EEW80831.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038]
          Length = 266

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 149/267 (55%), Positives = 198/267 (74%), Gaps = 3/267 (1%)

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKK 135
           +++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++   K  
Sbjct: 1   MKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLA 60

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT
Sbjct: 61  GINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYT 120

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V WTH A++ AEE G
Sbjct: 121 TDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYG 180

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           ITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +GNYGE+F+RN+G
Sbjct: 181 ITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIG 239

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
           + S LKI RG NA W+KGGL Y  P+R
Sbjct: 240 SGSPLKIARGLNAQWNKGGLQYGIPVR 266


>gi|186470673|ref|YP_001861991.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184196982|gb|ACC74945.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 345

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 138/328 (42%), Positives = 200/328 (60%), Gaps = 7/328 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + +  +  L  IK RG L+CGI+ G+ GF+     G + G D DFCRA+++A+  DP
Sbjct: 24  SAVATAAGSETLAHIKARGTLRCGISEGIAGFSAADGAGHFSGIDADFCRAVAAAVLGDP 83

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K+ ++PL A  RF AL++ +ID+L+RNT WTLLRE +LG+ F  I ++D Q F++ +K 
Sbjct: 84  NKVTFVPLKASARFPALRTDRIDLLARNTTWTLLREGTLGIQFAGILFYDAQAFMVSRKN 143

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G +S S L+GA++CVQ  TT+E  L  Y  A+++   P+V   V E+  A+ + RC A T
Sbjct: 144 GTASSS-LNGATVCVQQDTTSERNLMGYASANSLNVKPLVVGSVPELAQAFFSGRCSAAT 202

Query: 196 GDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D S L  LK       S   ILP+ +SK PL PA+   D  W  +V W  + ++TAEEL
Sbjct: 203 ADASLLSVLKSRAPGGASTVEILPERLSKQPLGPAVRGDDDAWLVVVRWVLFTLITAEEL 262

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           G+T++N    +    +P V R L  D +  +   LG+   WT R ++  GNYGEMF+RNL
Sbjct: 263 GVTRENY---AARVRDPLVARALVPDAT--VTATLGIEPGWTLRALQSAGNYGEMFERNL 317

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  S L + RG N LW+ GGLMYAPP++
Sbjct: 318 GAGSPLGLERGLNNLWTHGGLMYAPPMQ 345


>gi|269964209|ref|ZP_06178500.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
 gi|269831058|gb|EEZ85226.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
          Length = 285

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 143/271 (52%), Positives = 190/271 (70%), Gaps = 3/271 (1%)

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             + +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++
Sbjct: 18  LGNKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMV 77

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  G+SS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RC
Sbjct: 78  KKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRC 137

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           D  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI  WT +AMV A
Sbjct: 138 DVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWTLFAMVNA 197

Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311
           EE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I+ +GNYGE F+
Sbjct: 198 EEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFE 254

Query: 312 RNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +G  S LKI RG NALW+ GG MYAPPIR
Sbjct: 255 RTVGTGSPLKISRGVNALWNAGGFMYAPPIR 285


>gi|148240911|ref|YP_001220412.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. BTAi1]
 gi|146411287|gb|ABQ39740.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. BTAi1]
          Length = 339

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/323 (34%), Positives = 184/323 (56%), Gaps = 7/323 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S++  IK+RG++ CG + G+ G +    NG ++GFD D CR  ++AI  D  KI+
Sbjct: 20  SAGAQSVVNKIKQRGYVSCGASQGVPGLSRPDENGYYRGFDSDMCRTFAAAILGDKDKIR 79

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++PLNA +RF ALQ+ +ID+LSR +  TL R+  +   F  IT +D  G ++ K   I+ 
Sbjct: 80  FVPLNAGQRFPALQTGEIDVLSRTSTITLSRDTVVR--FVWITLYDTDGLLVRKADKITD 137

Query: 140 VSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             QL+G ++C+Q G + TE ++ +  + + +    + F+   +   A+   RCD Y  D 
Sbjct: 138 PKQLAGKTVCLQGGGSLTERSIEETEEEYGITMKKVYFDSTIQARDAFFGGRCDTYVTDG 197

Query: 199 SALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
           +A    + +    P ++ I+    +  P   A+ +GD + ++I  WT  A++ AE  GIT
Sbjct: 198 TAAAGQRASVAKNPDDYDIIKVGHAAEPNGVAVARGDDQLFDITRWTINALLWAELHGIT 257

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
            +NI++  K + + +++R LG +     G+ LGL   W Y +++ MGNY E++D NLG  
Sbjct: 258 ARNIDEKLK-SGSIEIKRVLGQEP--GFGKPLGLDDKWVYNVVKQMGNYAEIWDNNLGKS 314

Query: 318 SELKIPRGYNALWSKGGLMYAPP 340
           S LKI RG NALW  GGL Y  P
Sbjct: 315 SPLKIDRGLNALWKDGGLNYPYP 337


>gi|254707031|ref|ZP_05168859.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           pinnipedialis M163/99/10]
          Length = 251

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 140/252 (55%), Positives = 186/252 (73%), Gaps = 3/252 (1%)

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICV 150
           QS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++   K  GI+S  QLSGASICV
Sbjct: 1   QSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICV 60

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           QAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L    
Sbjct: 61  QAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALAN 120

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           P +HVILP+IISK P    + QGD  W ++V WTH A++ AEE GITQ N+ ++ K + N
Sbjct: 121 PDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDN 179

Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330
           PD++R LG +  + IG  LGL KDW  +II+ +GNYGE+F+RN+G+ S LKI RG NA W
Sbjct: 180 PDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQW 239

Query: 331 SKGGLMYAPPIR 342
           +KGGL Y  P+R
Sbjct: 240 NKGGLQYGIPVR 251


>gi|113478121|ref|YP_724182.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
 gi|110169169|gb|ABG53709.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
          Length = 3427

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 116/325 (35%), Positives = 174/325 (53%), Gaps = 13/325 (4%)

Query: 25   SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             +L  IK+RG LK G+     GFA   +NG+++GFDVD  +A+++AIF DP K++    +
Sbjct: 2867 DLLAKIKERGVLKLGLPDNEPGFAVKMSNGEYEGFDVDLGKAIAAAIFGDPEKLEVKTQS 2926

Query: 85   AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
             K+ F    +  +DI +      L+R+ SLG+ F PI  + GQG ++    GI+ +  L+
Sbjct: 2927 FKDSFANTANGVVDISAMGITHNLVRDASLGIDFGPIYLYTGQGVLVRNDSGITVLPALN 2986

Query: 145  GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            G  + V  G T+   + D          P  F   +E+ AAY     DA   D++ L   
Sbjct: 2987 GRRVGVLEGATSLQNIQDTITELGGDIIPAEFTTNDEMFAAYDDGDIDAVITDMTILNGR 3046

Query: 205  KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                  P EH IL DI+SK PL   I +  +EW ++V W   A+V AEE  IT KNI ++
Sbjct: 3047 VQNLSNPKEHKILDDILSKEPLGLIIDENQSEWSDVVRWVTNALVQAEEYDITSKNIKRL 3106

Query: 265  SKDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
              +  + D        V++FLGI+   NIG+ LGL  D+   +I+ +GNYGE+++R    
Sbjct: 3107 MANNLDDDPNNDSDPVVRQFLGIE--GNIGKVLGLPNDFVPNVIKAVGNYGEIYERYF-- 3162

Query: 317  QSELKIPRGYNALWSKGGLMYAPPI 341
             S L +PR  N L+S  GL YA P+
Sbjct: 3163 DSNL-LPREQNELFSNFGLQYALPL 3186



 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 27/323 (8%)

Query: 27   LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            L DI KRG +K  I+           +G+   FD++F   +++A+F D SK++ +     
Sbjct: 2548 LDDIIKRGQIKVAISG----------SGNE--FDLEFAEVIAAAVFGDASKVKSITSKFS 2595

Query: 87   ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            + F  +   + D+ ++    TL R+  L + F P   FD Q  I+     I++VS L+  
Sbjct: 2596 KSFELVADGKADLAAQRITATLGRDGELNVDFAPTYLFDYQTVIVPNDSDITNVSHLNEQ 2655

Query: 147  SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +I V  GTT  + L +  +   +K+ P +FE  EE+ AAY A   DAY+ D S +     
Sbjct: 2656 TIGVIEGTTALINLQNQLEVEGIKFTPKLFETAEEMIAAYDAGEVDAYSHDRSLILENLD 2715

Query: 207  TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               +P  H +L   +SK P++ A+ + D++W ++V W  Y  + AEE GI+ +NI +   
Sbjct: 2716 QLSQPENHRLLDVELSKEPISLALPENDSQWADVVRWAGYVPIQAEEFGISSQNIAEFIA 2775

Query: 267  DTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
              T+ +        ++RFLGI+   N+GE LGL  D+   II  +GNY E++DR+     
Sbjct: 2776 LNTDDNPTNDSSLGIRRFLGIE--GNLGETLGLPNDFAVNIINQVGNYSEIYDRHFS--- 2830

Query: 319  ELKIPRGYNALWSKGGLMYAPPI 341
               I    N+LWS GG +Y+PP 
Sbjct: 2831 --GIEGDRNSLWSDGGFLYSPPF 2851


>gi|117923521|ref|YP_864138.1| extracellular solute-binding protein [Magnetococcus sp. MC-1]
 gi|117607277|gb|ABK42732.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Magnetococcus sp. MC-1]
          Length = 342

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 111/328 (33%), Positives = 181/328 (55%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                +  +  L  ++ RG L CG+ TG   F++ + +G W GF  D+CRAL+ A+ DD 
Sbjct: 18  APAQAAPASDTLDKVRARGLLNCGVMTGTPAFSQQQPDGAWHGFFADWCRALAVAVLDDA 77

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             + ++ +    RF AL   Q+D++  NT WTL RE    + F  I  +DGQ     K  
Sbjct: 78  RAVHFIQVTPATRFKALTELQVDVVMSNTTWTLSREYQYQVRFPAIYLYDGQAIATRKDT 137

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              +++Q + A++CV+  +T+   L +Y + +N+ ++ +   +   I  A+  HRCD  T
Sbjct: 138 RWHTLAQANQATVCVEPNSTSHANLQEYAQRNNLNFNYLALNQQG-IITAFLEHRCDLIT 196

Query: 196 GDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D  +    LK T     ++V+  + +S+ PLAP +   D  W  IV     A++ A+E 
Sbjct: 197 DDRIALTANLKTTASNDQDYVVFAETLSREPLAPMVRADDERWQRIVRMVVQALLVADEK 256

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           G+++  + Q  +  ++P+VQR LG +     G+ +GL++ W  R+I  +GNYGE+F R+L
Sbjct: 257 GVSRDALKQNRERLSDPEVQRLLGSEDDP--GQFVGLSRGWARRMIEAVGNYGELFARHL 314

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G QS L++PR  N  WS+GGL YAPP R
Sbjct: 315 GAQSSLQMPRLLNRPWSRGGLFYAPPFR 342


>gi|148555539|ref|YP_001263121.1| extracellular solute-binding protein [Sphingomonas wittichii RW1]
 gi|148500729|gb|ABQ68983.1| extracellular solute-binding protein, family 3 [Sphingomonas
           wittichii RW1]
          Length = 347

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 125/312 (40%), Positives = 199/312 (63%), Gaps = 5/312 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++ RG+++CG +    GF+    +G W+G DVD CRA++ A   D  K++++PL  
Sbjct: 34  TLEAVRSRGYVRCGASKEAPGFSGPDESGRWRGLDVDTCRAIAVAALGDREKVRFVPLTG 93

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++R  ALQ+ +ID+L R T WTL R+   G+ F   TY+D   F++ +K G+  ++ L G
Sbjct: 94  QQRITALQTGEIDVLPRTTTWTLRRDA-AGINFTIPTYYDYTAFMVRRKVGVRDLAGLRG 152

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           AS CVQ+G+ TE+ LAD  + + +   P++F+ V+    A+ + RCDA   D SAL AL+
Sbjct: 153 ASACVQSGSMTEVILADVSRKYRLALRPVIFDNVQSTRQAFLSGRCDALITDASALAALR 212

Query: 206 LTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
            T   R  ++VILP   + +PL PA+  GD +W++IV ++  AM+  E+LGI +   +++
Sbjct: 213 ATLPGRADDYVILPADSNVAPLTPAVRHGDDQWFDIVKFSIEAMIDGEQLGIGRDTADRL 272

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
              + +P+V+RFLG++     G ALG++ D+ Y+I+R +GNYGE++D NLG++S L IPR
Sbjct: 273 RA-SADPNVRRFLGVEP--GNGRALGISDDFAYQIVRQIGNYGEVYDDNLGSRSRLNIPR 329

Query: 325 GYNALWSKGGLM 336
           G N L   GGLM
Sbjct: 330 GLNRLQRDGGLM 341


>gi|83593850|ref|YP_427602.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83576764|gb|ABC23315.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 373

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 3/321 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           N   L  I+ RG + CG N  + GF    ++G+W+GF +DFCRAL++A   DP+  + +P
Sbjct: 55  NGDTLTSIRDRGSVTCGTNP-IPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVP 113

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + +  R+ AL S   D+    + WTL R+ +LG  F  +  +DGQ F+        SV  
Sbjct: 114 VESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKA 173

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            +G  +C+  GTT E+ L D+ K ++++   I  E  E    ++   RC+ +  D   L 
Sbjct: 174 AAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLA 233

Query: 203 ALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
                    P  + ++ + ISK PL P +   D +W  I  W    ++ AEE GI+   +
Sbjct: 234 LRNALHMTPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTL 293

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
              S         R   +    +   ALGL   W  R+I  +GNYGE+FDRNLG  SE+ 
Sbjct: 294 VDPSPTADLSSEDRVF-VGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSEIG 352

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG NALWS+GGLM +PP++
Sbjct: 353 LDRGVNALWSEGGLMISPPLQ 373


>gi|261314499|ref|ZP_05953696.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261303525|gb|EEY07022.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
          Length = 247

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 138/248 (55%), Positives = 183/248 (73%), Gaps = 3/248 (1%)

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGT 154
           +D+L RNT WT+ R+ SLGL F  I Y+DGQGF++   K  GI+S  QLSGASICVQAGT
Sbjct: 1   MDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICVQAGT 60

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           TTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L    P +H
Sbjct: 61  TTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDH 120

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           VILP+IISK P    + QGD  W ++V WTH A++ AEE GITQ N+ ++ K + NPD++
Sbjct: 121 VILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIK 179

Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGG 334
           R LG +  + IG  LGL KDW  +II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGG
Sbjct: 180 RLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGG 239

Query: 335 LMYAPPIR 342
           L Y  P+R
Sbjct: 240 LQYGIPVR 247


>gi|209546999|ref|YP_002278917.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538243|gb|ACI58177.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 345

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 112/318 (35%), Positives = 187/318 (58%), Gaps = 7/318 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           S+L  +K+RG L CG +    GF  +       +G DVD CRA ++A+  DP K+ ++ +
Sbjct: 27  SVLDSVKQRGVLNCGTDNTTPGFGYLNPKTSKMEGVDVDLCRATAAAVLGDPDKVNFVVV 86

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
             K RF A+Q+ Q+DI+  +T     R  +L + F P  +FDG G ++    G+ S++ L
Sbjct: 87  TDKSRFNAVQTGQVDIVYAHTSVFASRAAALAVDFLPSYFFDGGGVMVTAASGVKSINDL 146

Query: 144 SGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           SGA+IC   G+ +E TLA   KA N      + F+  E++ +A  + RC+    D SAL 
Sbjct: 147 SGATICTTQGSGSEATLAQEVKARNLTNTKILTFDTSEKLFSALTSGRCNGMYTDKSALA 206

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +  + + +++VILP+ ++ +P A  I+Q D EW  +++WT YA+  AEE GIT  N++
Sbjct: 207 AWRGNSQKSADYVILPETLAVAPFAGIIVQNDPEWRKLMTWTLYALFQAEEWGITSANLS 266

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           ++ K + +P +Q+FLG++     G    ++  +   +I+ +GNYGE++DR+LG ++ L +
Sbjct: 267 EMQK-SADPAIQKFLGVN--GGFGADFHVSDSFIADMIKGVGNYGEIYDRSLGPKTPLYL 323

Query: 323 PRGY--NALWSKGGLMYA 338
            R    NAL   GGL+Y+
Sbjct: 324 ERDKTSNALSKNGGLLYS 341


>gi|144897558|emb|CAM74422.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 335

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 175/340 (51%), Gaps = 12/340 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F  ++L  +     + +    +L  +  RG + CG++    GF      G   G +VD 
Sbjct: 7   SFMTAMLFALSAPAPTPALAGQVLDRVLTRGKVVCGVDQT-PGFGGFDDRGVPVGLEVDL 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRA+++AI  +P  IQ   +  K +F AL   ++D+    T WT  R+ ++  +F  I +
Sbjct: 66  CRAIAAAILKNPQAIQVQRVTTKYKFHALAEGELDVAFGMTTWTFDRDTTMMASFPAIAF 125

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF+        +    + ++ICVQ+GTT+   LA+Y          +     EE  
Sbjct: 126 YDGQGFMKWAD---IADPWAATSTICVQSGTTSANNLAEYLSRRKSAAKVLALSSSEEKF 182

Query: 184 AAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           +A+   RC A TGD + L   K   +      V+L  IIS+ PL PAI   D EW++IV 
Sbjct: 183 SAFAERRCTAVTGDSTELAVQKNRRSATQPSWVLLETIISREPLGPAIFNNDPEWFSIVR 242

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W+    + AE  G+ + N+  V     + +++R LG +     G  L L + W  RII  
Sbjct: 243 WSMLIPIIAEARGLGRYNLESVPAT--DAELRRLLGEEP--GFGANLRLDQAWARRIIAS 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F RNL   + L I RG NALWS+GGL+YAPP+R
Sbjct: 299 VGNYGEIFARNL---APLGIVRGQNALWSEGGLLYAPPLR 335


>gi|67923106|ref|ZP_00516597.1| Hemolysin-type calcium-binding region:Bacterial extracellular
           solute-binding protein, family 3 [Crocosphaera watsonii
           WH 8501]
 gi|67855059|gb|EAM50327.1| Hemolysin-type calcium-binding region:Bacterial extracellular
           solute-binding protein, family 3 [Crocosphaera watsonii
           WH 8501]
          Length = 712

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 14/325 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL-PL 83
            +L +IK RG LK GIN    GF+    NG + GFDVD  +A++ A+F+D +KI+++   
Sbjct: 211 DLLQEIKDRGILKLGINGQKPGFSFPDENGSYIGFDVDLGKAIAVAVFNDSNKIEFVERE 270

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +       + +  +D+ +      L+R+   G+ F     + GQGF++ K  GI +++ L
Sbjct: 271 DRVTWLTNVANGVVDVTAAQVTQNLVRDGKAGVDFISPYLYTGQGFLVRKDSGILNLATL 330

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +G  + + +GTT E  L D  K +   + P+ ++ ++E+ A Y     DA   D+  L  
Sbjct: 331 NGHEVGLFSGTTAEQNLQDAMKEYGGTFIPVYYDNLDEMLAGYAQGDIDAIINDLPLLGG 390

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           L  T   P EH++L D+ISK PL+  + +  ++W + VSW  Y ++ AEE GITQ NI+Q
Sbjct: 391 LIDTFSNPDEHLLLDDVISKEPLSMVVDENQSDWKDAVSWVQYGLLQAEEYGITQDNIDQ 450

Query: 264 VSKDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           +  D T+ +         + FLGI+   N GE LGL  D+   +I+ +GNYGE+++R+  
Sbjct: 451 ILADNTDSNPDNDSDISTRIFLGIE--GNAGELLGLENDYMVNVIKAVGNYGEIYERHFD 508

Query: 316 NQSELKIPRGYNALWSKGGLMYAPP 340
           +     +PR +N L    GL    P
Sbjct: 509 SD---ILPRDFNQLSGDFGLQIPYP 530



 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 15/200 (7%)

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           +  G+T    L     ++ +++ P  +E    + A Y A   DA + D S +Y    T  
Sbjct: 1   MIEGSTALTNLEILLSSNGVEFEPRFYESTSAMFADYDAGNIDALSTDRSLIYGRLDTLS 60

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK--- 266
            P  H IL    S  P+A  + + D++W N+V W   A + AEELG+   NI Q+     
Sbjct: 61  EPDAHHILDVEFSSEPIAMVLPEDDSQWNNVVKWVINATIEAEELGLNSDNIEQILAVNK 120

Query: 267 -----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
                + ++P ++RFLGI+    +GEALGL  D+ Y I++ +GNY E++DR+  +     
Sbjct: 121 DENPNNDSDPAIRRFLGIESQ--LGEALGLPNDFAYNIVKLVGNYDEIYDRHFPD----- 173

Query: 322 IPRGYNALWSKGGLMYAPPI 341
           + R  N L+S GGL+Y+PP 
Sbjct: 174 LERDRNLLYSDGGLLYSPPF 193


>gi|218672485|ref|ZP_03522154.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli GR56]
          Length = 219

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 129/220 (58%), Positives = 176/220 (80%), Gaps = 1/220 (0%)

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E+
Sbjct: 1   YYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEV 60

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           +AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PL PA+ QGD +W++IVS
Sbjct: 61  NAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLGPAVRQGDDQWFDIVS 120

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W  YA++ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y II++
Sbjct: 121 WVGYALINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIIKN 179

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F+RN+G  S+LKI RG NALW+KGG+ YAPP+R
Sbjct: 180 VGNYGEVFERNVGQGSQLKIARGLNALWNKGGIQYAPPVR 219


>gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
            CS-505]
 gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
            CS-505]
          Length = 9381

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 171/329 (51%), Gaps = 17/329 (5%)

Query: 25   SILGDIKKRGFLKCG----INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            ++L +I+ RGF+K G      +G  GFAE+ + G +KGFDVD  +A+++A+F DPSK++Y
Sbjct: 8644 NLLAEIQNRGFIKYGLPQITGSGFPGFAEIDSQGQYKGFDVDLSKAIAAAVFGDPSKVEY 8703

Query: 81   LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                    F    +  +D+ +      L+R+  LG+ + P+    GQG +  K  GI+ +
Sbjct: 8704 TQQAFANSFANTANGLVDVSAAGYTGNLMRDAGLGVDYSPVYIHTGQGILTRKDSGITGI 8763

Query: 141  SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            + L+G++I      T    L+D  K          F+   ++ AAY     DA   D + 
Sbjct: 8764 ATLNGSTIGALTTVTAIENLSDLTKKFGSTIIITPFDDKNKMYAAYEKGEIDAVYNDKTL 8823

Query: 201  LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            L  +  T   P  H ILP+  SK PL   + +  ++W ++V W   ++V AEE GIT  N
Sbjct: 8824 LAGIIPTLSDPQAHEILPETFSKEPLTLILDENQSDWADVVRWVMNSLVQAEEYGITSTN 8883

Query: 261  INQVSKDTTN--------PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312
            I+ +     +         ++Q FLG+    N G +LGL+ D+  ++I+ +GNYGE++ R
Sbjct: 8884 IDDIIAKNRDNDPNNNSIKEIQAFLGL--QGNPGASLGLSSDFVVKMIKAVGNYGEIYAR 8941

Query: 313  NLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            N    + + +PR  N L+   GL YA P+
Sbjct: 8942 NF--DTNI-LPREKNDLYHFSGLQYALPL 8967



 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 29/339 (8%)

Query: 16   FFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKG-FDVDFCRALSSAIFD 73
              T+ +   ++L +I++RG+++  G  +               G FD  F RA+++AIF 
Sbjct: 8306 TVTTSANPDNLLAEIQQRGYIRFSGGRSDS-----------ISGVFDYQFVRAIAAAIFG 8354

Query: 74   DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            D +++  +P    E F  + +KQ+D+ +R+    L+R+  L + F P+ Y+D    ++  
Sbjct: 8355 DANRVDQVPGTFSESFSQVANKQVDLSTRHITQNLVRDGELNVDFGPVYYYDFLSVLVRN 8414

Query: 134  KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            K GI     L+G  I V   TT    L +   +  +++   VF+   ++ AAY     DA
Sbjct: 8415 KSGIQGAKDLNGKKIGVVKNTTALTNLDNLLDSIGVQFTAEVFDTQNDLYAAYNLGEVDA 8474

Query: 194  YTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
               D   +Y    +   +   EH  L    SK P+   I + ++EW ++V W  Y  + A
Sbjct: 8475 IASDKGIIYDALEREILENKQEHRFLDIQFSKEPIGLVIPENESEWGDVVRWVVYTTIQA 8534

Query: 252  EELGITQKNINQVS--------KDTTNPDVQRFLGIDK-SSNIGEALGLTKDWTYRIIRH 302
            EE GI  +NI+++         K+ ++P ++RFLG++    ++G AL L +D+  ++I+ 
Sbjct: 8535 EEYGINSQNIDRLLADNTDDNSKNDSDPAIRRFLGLEGLEGSLGSALELPQDFVVQVIKQ 8594

Query: 303  MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            +GNYGE++ R+  +     + R  N L   GGL+ + P 
Sbjct: 8595 VGNYGEIYQRSFPS-----LTRDLNLLSLTGGLLESLPF 8628


>gi|288962134|ref|YP_003452429.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510]
 gi|288914400|dbj|BAI75885.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510]
          Length = 352

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 8/332 (2%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            L   +++ +   L  I  RGFL CG+ +G+ G +     G   GF VD CR  ++A   
Sbjct: 26  ALTSPAWAGDGDTLERIHGRGFLICGLRSGVSGISFSDPQGHLDGFLVDVCRVFAAATLG 85

Query: 74  DPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +   I+ + L    + F A++  ++D+    T WT  R++S  + F      DGQGF +H
Sbjct: 86  NAQAIRVVRLPEKPQEFQAVEKHEVDVALTTTTWTFSRDLSNDIEFLMPLLHDGQGFAIH 145

Query: 133 KKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                       G  ++CV+  TTT   L D+ +  ++ +    F+ ++E   A+ AH C
Sbjct: 146 SDGTPPPPLDRLGPRTVCVKTATTTVRNLEDHIRKSDLPWTMRTFQTLDEALQAFLAHEC 205

Query: 192 DAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           D  T D + L        +    + + PD+IS+ PL P I +GD  WY++  W  +A+V 
Sbjct: 206 DLLTTDRTVLVTSLAGYRKAGMGIYIYPDVISREPLTPYIARGDRNWYDVTRWILHAIVL 265

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           A+  G+T  ++ Q  +   +P++ R LG   S N    LGL  DW  + +  +GNYGE+F
Sbjct: 266 ADARGVTSADV-QAGRVPDDPELHRMLG--HSGNAARMLGLPDDWALQALAQVGNYGEIF 322

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +RNLG      + RG N  W++GGL+Y+PP R
Sbjct: 323 ERNLGI--PYGMDRGPNKPWTQGGLLYSPPFR 352


>gi|117925598|ref|YP_866215.1| extracellular solute-binding protein [Magnetococcus sp. MC-1]
 gi|117609354|gb|ABK44809.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Magnetococcus sp. MC-1]
          Length = 360

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 185/348 (53%), Gaps = 10/348 (2%)

Query: 3   KDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           +   V +  L I  +          ++  S +  IK RG L+CG+    +  + +  +G+
Sbjct: 15  RKLGVVLALLWIACWLPQAGWCGEAASLGSTVQGIKDRGVLRCGVEQNTLTMSAMDRDGE 74

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           W+GF VD C AL  A+      ++ + +N   R+ AL+    D+L  N+ WTL RE +LG
Sbjct: 75  WRGFMVDLCHALGVALLGTTQDVEIIEVNKHLRYEALKGNAYDVLMSNSTWTLTRETALG 134

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F     FDGQGF+ H K+G + +S    A+ICV   TT+   L      H   +    
Sbjct: 135 VRFVTPYLFDGQGFLAHLKQGRTRLSAYDKANICVLDSTTSLTNLKALLAQHYPHFTLTS 194

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGD 234
           F  +E +  ++ +  CD  + D   L + +L        + IL DIIS+ PL P + QGD
Sbjct: 195 FVTLERMRESFFSGNCDMLSSDRLVLASEQLVRGGEQGAYHILEDIISREPLGPYVRQGD 254

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
            +W++++ W    ++ AE  G+T+ N+++++  T + ++Q  LG+    N  +ALG+   
Sbjct: 255 EQWFSLLRWLVQGLLLAEHKGVTRDNVDKLAGTTEDREIQHLLGV--VGNAHQALGVDAQ 312

Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           W  R+IR +GN+ E++ RNLG  ++L + RGYN LW KGGL Y PP +
Sbjct: 313 WMRRVIRVVGNFEEIYQRNLGALAQLGVRRGYNGLWYKGGLHYVPPFQ 360


>gi|256376161|ref|YP_003099821.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255920464|gb|ACU35975.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 319

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 99/325 (30%), Positives = 169/325 (52%), Gaps = 7/325 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T+ ++ +  +  I++RG L+ G++TG+ G +     G  +G DVD  RA+++A+F +P 
Sbjct: 1   MTTSASLSPTVSAIRRRGHLRLGVSTGIRGLSWTDDAGVRRGLDVDTGRAVAAALFGEPG 60

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           +I+Y  ++ ++R  A+ S  +D+L+ N  WT  RE    +AF   T +D    ++ +  G
Sbjct: 61  RIEYTEIDPEDRIRAVTSDAVDLLACNATWTFSRECDANVAFVLTTCYDEGAILVRRDSG 120

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+S   L G ++ +  GT++E  L  +F       H   +       AAY +     Y  
Sbjct: 121 IASADDLDGHTLGMCEGTSSEEALRAWFGPRGRAVHCKHYASPAAALAAYASGEVTGYVA 180

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D   +   +     PS+HV+LP+ +S  P+ P +   D +W     W  +A++ AE  G+
Sbjct: 181 DGVVVAGERTRLATPSDHVVLPERVSVEPMGPVVKDDDPQWVKTARWVFFALIAAEAAGV 240

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T   +   + +           +   S +    GL   W   ++  +GNYGE+++RNLG+
Sbjct: 241 TSHQVRAGTAEDPPL-------LKDQSRLAAKAGLHPRWISAVVGEVGNYGEIYERNLGD 293

Query: 317 QSELKIPRGYNALWSKGGLMYAPPI 341
            S L+IPRGYN LW +GGLMYAPP+
Sbjct: 294 ASGLRIPRGYNELWLRGGLMYAPPL 318


>gi|197104926|ref|YP_002130303.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Phenylobacterium zucineum
           HLK1]
 gi|196478346|gb|ACG77874.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Phenylobacterium zucineum
           HLK1]
          Length = 310

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 105/311 (33%), Positives = 175/311 (56%), Gaps = 6/311 (1%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K R ++ CG + G+ G +     G W+GFDVD CRA ++A+  D  KI+++PLNA +R  
Sbjct: 2   KGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRLP 61

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ALQ+ +ID+LSR T  T  R+  + + F  +T FD    I  K+ G +S + L+G ++C+
Sbjct: 62  ALQTGEIDVLSRTTTMTFTRD--MAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCL 119

Query: 151 QAGTTTELT-LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           Q+G ++    L        +++  + F+       AY + RCD Y  D     +   T  
Sbjct: 120 QSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSARCDVYVTDGFLGASQVATVA 179

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           R  +   L  +    P   AI +GD  W+++V WT   ++ AE+ G+TQ N++++ + + 
Sbjct: 180 RDPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRR-SG 238

Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329
             DV+R LG D +   G A+GL  DW Y++++ +GNYGE+++RNLG ++ +K  R  N  
Sbjct: 239 PADVRRVLGADPA--FGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRP 296

Query: 330 WSKGGLMYAPP 340
           +  GGL++  P
Sbjct: 297 YKDGGLLFPYP 307


>gi|288962967|ref|YP_003453261.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288915233|dbj|BAI76717.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 353

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 6/327 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           ++ +T+  +L +I++RG ++CG++    GFA     G   GF VD CRAL++A+      
Sbjct: 31  SARATDRPVLAEIERRGVVRCGVSFN-PGFAANDDGGRPVGFMVDLCRALAAAVLGKADA 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I+   L+  + F A+ + ++D+    T WTL R+++  + F P  ++D QG    +    
Sbjct: 90  IEIRRLSKPQEFDAVAAGEVDVSFAQTSWTLTRDVTHAVDFGPPVFYDVQGIAAWRLPDG 149

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S       ++C+ AGTTT+  +          +    F    +   A+ +  C A   D
Sbjct: 150 GSALDGGELTVCMPAGTTTQAEMESLIAGGKRPWKLRSFPGWPDALEAFLSRDCAALGAD 209

Query: 198 ISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L         P + + + D  + S+ PLAP     D  W   V WT +A+  A++ G
Sbjct: 210 RAQLTTALHMLGLPPDSLEITDAPLASREPLAPMTPNSDRNWMAAVRWTMFALFLADDAG 269

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           ++  N N   + T   +++R L       +    GL  DW Y+ +  +GNYGE+FDRNLG
Sbjct: 270 VSGANAN-FQRITGGSEMRRLL--SGIPEVAAKAGLRPDWAYQAVVQVGNYGEIFDRNLG 326

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
            +S  K+ RG N  W++GGL+YAP  +
Sbjct: 327 ARSPFKLERGLNRPWTQGGLLYAPVFQ 353


>gi|330899538|gb|EGH30957.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 218

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 2/220 (0%)

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DG GF+++ K G++S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +E 
Sbjct: 1   YYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDES 60

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++IV 
Sbjct: 61  AKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSIVR 120

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I++ 
Sbjct: 121 WTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIVKQ 178

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 179 VGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 218


>gi|254464335|ref|ZP_05077746.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
 gi|206685243|gb|EDZ45725.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
          Length = 333

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 177/345 (51%), Gaps = 19/345 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +  F+S L L +    +    A        I+ RG+L CG+ +  +GFA ++ +G+W 
Sbjct: 1   MMR--FLSALTLGLWLAGALGAEAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRYDGEWT 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVDFCRA+++A+  D + ++++PL++  R   L   ++D+L R T +T  R+++  L 
Sbjct: 59  GFDVDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALE 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  IT++D Q  +++   G  +++ L+G ++C  +GTT+   +     +         + 
Sbjct: 119 FPAITFYDSQKVLVYADTGARTLADLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYA 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236
                  A+    C+A T D S L A+  +      + V+L D I+  PL P + + D +
Sbjct: 179 SQAGRWRAFFGRECEAVTADGSDLAAMLASRPGYRDDFVLLEDEIANEPLGPVVREDDRQ 238

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W  IV W     + AE  GI Q         +   ++ R          G  LG+   W 
Sbjct: 239 WEQIVRWVINLTLVAEAAGIGQ--------TSGPAEIARL-----PLPAGADLGVAGTWG 285

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY  P+
Sbjct: 286 ADVIRQVGNYDDIFSRNLGDGSELRMARGRNALWTDGGLMYPLPM 330


>gi|56697219|ref|YP_167584.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678956|gb|AAV95622.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
          Length = 333

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 177/345 (51%), Gaps = 19/345 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +  F   L L +    + S  A        I+ RG+L CG+ +  +GFA ++ +G+W 
Sbjct: 1   MMR--FRGALTLGLWLAGALSAQAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRFDGEWT 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVDFCRA+++A+  D + ++++PL++  R   L   ++D+L R T +T  R+++  L 
Sbjct: 59  GFDVDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALE 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ITY+D Q  +++   G  ++S L+G ++C  +GTT+   +     +         + 
Sbjct: 119 FPAITYYDSQKVLVYADTGARTLSDLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYA 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236
                  A+    C+A T D S L A+  +      + V+L D I+  PL P + + D +
Sbjct: 179 SQAGRWRAFFGRECEAVTADGSDLAAMMASRPGYRDDFVLLEDEIANEPLGPVVREDDRQ 238

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W  IV W     + AE  GI Q         +   ++ R      +   G  LG+   W 
Sbjct: 239 WEQIVRWVINLTLVAETAGIGQV--------SDPEEIARL-----ALPAGADLGVVDTWG 285

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY  P+
Sbjct: 286 AEVIRQVGNYDDIFRRNLGDGSELRMERGRNALWTDGGLMYPLPM 330


>gi|224367657|ref|YP_002601820.1| AapJ2 [Desulfobacterium autotrophicum HRM2]
 gi|223690373|gb|ACN13656.1| AapJ2 [Desulfobacterium autotrophicum HRM2]
          Length = 219

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 108/222 (48%), Positives = 153/222 (68%), Gaps = 3/222 (1%)

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ KK G+    +L GA++CV  GTTTE  +ADYF+A+ MK +P+V E   
Sbjct: 1   MNYYDGQGFLISKKLGVKDAKELDGATVCVLPGTTTEQNVADYFRANGMKMNPVVIENTA 60

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+  A+ A RCD  T D S L   +     P +++ILP IISK PLAPA+  GD +W ++
Sbjct: 61  ELAKAFFAGRCDCLTSDASQLAGTRAVAPNPDDYIILPTIISKEPLAPAVRHGDNKWKDV 120

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+++  AM+ AEELGIT KN+++  K +T+P VQRFLG+      G+ALGL + + Y I+
Sbjct: 121 VNYSVLAMINAEELGITSKNVDEKLK-STDPKVQRFLGVSP--GNGKALGLDEKFAYNIV 177

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMF+RN+G  + LKI RG NALW+ GGLMY+ P +
Sbjct: 178 KQVGNYGEMFERNVGMDTPLKIERGLNALWTNGGLMYSAPFK 219


>gi|119488696|ref|ZP_01621705.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC
           8106]
 gi|119455119|gb|EAW36260.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC
           8106]
          Length = 607

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 175/320 (54%), Gaps = 11/320 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL-PL 83
           ++L ++  RGF++ G+     G    + NG+  GFDVD  RAL++++F DP+ ++++   
Sbjct: 295 NVLQEVLDRGFVRVGVRNDAQGLGFAEENGNLTGFDVDLGRALAASLFGDPNAVEFVIQT 354

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
              +RF  + +  +D+ SRN    L R+  LG+ F PI  +D Q  +     GI+++ QL
Sbjct: 355 TGSQRFSDVANGVVDVTSRNATHNLRRDALLGVDFAPINTYDAQFVVTPTASGITTLEQL 414

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +G  I V AGTT+E  L +   A  +    +  +  + I  +Y     DA TGD   + +
Sbjct: 415 AGGRIGVSAGTTSETRLQEKLSAAGINAEVVALDNFQTIFDSYINGELDAITGDGGLIIS 474

Query: 204 LKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
             LT    + S+H   P+++ + PLA  + +  ++W ++VS   YA+  A ELG+T +N+
Sbjct: 475 SLLTLPVEQRSQHQPFPEVLGEEPLAMVVDENQSQWKDVVSGVTYAVTEALELGLTSENV 534

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
               + ++NP ++RFLG++   N+GE+LGL  D+    I  +GNY EM +RN      ++
Sbjct: 535 TAELE-SSNPVIRRFLGVE--GNVGESLGLPNDFALNAISAVGNYREMTERNF---PGIE 588

Query: 322 IPRGYNALWSKGGLMYAPPI 341
           +       +++GG +++ P 
Sbjct: 589 LEGIL--PYTEGGTLFSVPF 606



 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 91/283 (32%), Positives = 158/283 (55%), Gaps = 9/283 (3%)

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+ RAL++A+FD+P+ ++++ + A E F ++ S  +DI +     ++LR+ +LG+ F P
Sbjct: 3   IDYSRALATALFDNPNSVEFVVVEAGEDFNSVASGTVDIAATLPTHSVLRDATLGVDFSP 62

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +FD QG ++    GI+SV QL   ++ V AGT ++  L D  +   +  +   F   +
Sbjct: 63  TVFFDTQGVLVRGDSGINSVEQLQETTVGVLAGTRSQQNLEDAAQRAGITLNIQTFPSQD 122

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++ AAY A    + + +   L     T   P   VIL + I K PLA  + + ++E+ ++
Sbjct: 123 DLFAAYDAGEIGSVSINRGVLSNRIPTLSNPGNQVILEENIGKEPLAFIVPENESEFADV 182

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W   A + AE  GI  +N+N+     ++  ++RFLG+  S N+GE+LG+  D+   II
Sbjct: 183 VRWVVNAPIQAEFFGINSQNVNEFLDGNSD--IKRFLGV--SGNLGESLGIDNDFALNII 238

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNAL--WSKGGLMYAPPI 341
           + +GNY E+++RN    +   +PR  N L     GGL+Y PP 
Sbjct: 239 QQVGNYEEIYNRNFDETA---LPRNLNELMFVEPGGLVYYPPF 278


>gi|254230451|ref|ZP_04923829.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25]
 gi|151937022|gb|EDN55902.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25]
          Length = 222

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 114/225 (50%), Positives = 153/225 (68%), Gaps = 3/225 (1%)

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+
Sbjct: 1   FVGVNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFD 60

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W
Sbjct: 61  TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQW 120

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  WT  AM+ AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 121 FNIAKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 177

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++I+ +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 178 QVIKQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 222


>gi|327395693|dbj|BAK13115.1| general L-amino acid-binding periplasmic protein AapJ precursor
           [Pantoea ananatis AJ13355]
          Length = 323

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 108/319 (33%), Positives = 164/319 (51%), Gaps = 7/319 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +++  I++   L  G++ G  G ++    N  W GFD+D  RA++ ++  D  KI ++PL
Sbjct: 5   AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142
            + +RF AL+   ID+ + N   T  RE   G+ F     FDG+  +  +        Q 
Sbjct: 65  QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124

Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  I    G+TTE  L  YF   N+    ++F+  ++   AY +  CD Y  D   
Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L          S+H+IL D IS   +APA+   D++WY    W   A++ AE LGITQKN
Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKN 244

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           I + S +     ++ FL  D   N+   LGL  D+   IIR +GNYGE+F+RNLG  SEL
Sbjct: 245 ILEKSDNPEGY-LKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNSEL 301

Query: 321 KIPRGYNALWSKGGLMYAP 339
           K  R  N  W++GG++++P
Sbjct: 302 KQQRRDNKPWAEGGMLWSP 320


>gi|300721866|ref|YP_003711144.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC
           19061]
 gi|297628361|emb|CBJ88926.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC
           19061]
          Length = 323

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 7/320 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++++  IK    L  G++ G  G +     N  W+GFD+D  +A++ A+  +  KI ++P
Sbjct: 4   SAVIQRIKTHNILNAGVSLGFRGLSFRDNYNSQWEGFDIDLAKAVAIAVLGNSKKINFIP 63

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L +  RF AL+   ID+   N+  T   E    ++F     FDG+  + H+   I++VS+
Sbjct: 64  LQSGNRFQALKDNIIDLGCFNSSITFQSESEYNVSFAHPMLFDGEVLMTHENNLINNVSE 123

Query: 143 LSGAS---ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                   I    G+TT+  L  YF    +  + ++FE  ++   AY+   C+ Y  D  
Sbjct: 124 ARSTKKREIAAMRGSTTQENLERYFAELGLNCNIMLFESPQDAREAYQKGICNIYCLDSY 183

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L   ++  + P +H+ L D IS   ++PA+   D +W+  VSW   A++ AE LGIT+ 
Sbjct: 184 LLAGERIQLEAPEKHLFLKDRISLEAMSPAVSLHDPQWHASVSWIMKALIEAENLGITRN 243

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+N     +T   + +FL    S  +   LGL  ++TY+IIR +GNYGE+F+RNLG  S 
Sbjct: 244 NVNDKYNISTGY-INKFL--KPSEELCNNLGLQTEFTYKIIRELGNYGEIFERNLGKSSI 300

Query: 320 LKIPRGYNALWSKGGLMYAP 339
           L   R  N  WSKGG++Y+P
Sbjct: 301 LNQERKDNKPWSKGGMLYSP 320


>gi|291619370|ref|YP_003522112.1| AapJ [Pantoea ananatis LMG 20103]
 gi|291154400|gb|ADD78984.1| AapJ [Pantoea ananatis LMG 20103]
          Length = 323

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 106/319 (33%), Positives = 162/319 (50%), Gaps = 7/319 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +++  I++   L  G++ G  G ++    N  W GFD+D  RA++ ++  D  KI ++PL
Sbjct: 5   AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142
            + +RF AL+   ID+ + N   T  RE   G+ F     FDG+  +  +        Q 
Sbjct: 65  QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124

Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  I    G+TTE  L  YF   N+    ++F+  ++   AY +  CD Y  D   
Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L          S+H+IL D IS   +APA+   D++WY    W   A++ AE LGITQK 
Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKT 244

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
             + S +     ++ FL  D   N+   LGL  D+   IIR +GNYGE+F+RNLG  SEL
Sbjct: 245 FLEKSDNPEGY-LKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNSEL 301

Query: 321 KIPRGYNALWSKGGLMYAP 339
           K  R  N  W++GG++++P
Sbjct: 302 KQQRRDNKPWAEGGMLWSP 320


>gi|71735465|ref|YP_276122.1| amino-acid binding protein [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71556018|gb|AAZ35229.1| amino-acid binding protein, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 317

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           DIKKRG+L+ G++ GL+G +   + G+W GFDVD  RA+S AIF D   I+Y PL + +R
Sbjct: 7   DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F ALQ   ID+   N+  T  RE    + F     FDG+  +     G+S         +
Sbjct: 67  FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               G+TT   L  YF+  N+K    +++  ++   AY    C+ Y  D   L   +   
Sbjct: 127 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
               +HVIL  +IS+  ++PA +   T+  + V+W   +++ +E +GI   N+N    + 
Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 245

Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328
            N  ++++L  D    I   LG++  +T  +++++GNY E+F+R+LG++S L+  R  N 
Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303

Query: 329 LWSKGGLMYAP 339
           L S GGL+Y+P
Sbjct: 304 LRSVGGLLYSP 314


>gi|320327184|gb|EFW83198.1| amino-acid binding protein, putative [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 317

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           DIKKRG+L+ G++ GL+G +   + G+W GFDVD  RA+S AIF D   I+Y PL + +R
Sbjct: 7   DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F ALQ   ID+   N+  T  RE    + F     FDG+  +     G+S         +
Sbjct: 67  FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               G+TT   L  YF+  ++K    +++  ++   AY    C+ Y  D   L   +   
Sbjct: 127 AALEGSTTGDNLNRYFREQHLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
               +HVIL  +IS+  ++PA +   T+  + V+W   +++ +E +GI   N+N    + 
Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 245

Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328
            N  ++++L  D    I   LG++  +T  +++++GNY E+F+R+LG++S L+  R  N 
Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303

Query: 329 LWSKGGLMYAP 339
           L S GGL+Y+P
Sbjct: 304 LRSVGGLLYSP 314


>gi|320325529|gb|EFW81591.1| amino-acid binding protein, putative [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 346

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 166/311 (53%), Gaps = 3/311 (0%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           DIKKRG+L+ G++ GL+G +   + G+W GFDVD  RA+S AIF D   I+Y PL + +R
Sbjct: 36  DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 95

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F ALQ   ID+   N+  T  RE    + F     FDG+  +     G+S         +
Sbjct: 96  FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 155

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               G+TT   L  YF+  N+K    +++  ++   AY    C+ Y  D   L   +   
Sbjct: 156 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 215

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
               +HVIL  +IS+  ++PA +    +  + V+W   +++ +E +GI   N+N    + 
Sbjct: 216 RDSRDHVILEQMISREAMSPATLSSKIQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 274

Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328
            N  ++++L  D    I   LG++  +T  +++++GNY E+F+R+LG++S L+  R  N 
Sbjct: 275 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 332

Query: 329 LWSKGGLMYAP 339
           L S GGL+Y+P
Sbjct: 333 LRSVGGLLYSP 343


>gi|297192982|ref|ZP_06910380.1| ABC transporter amino acid-binding protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197723387|gb|EDY67295.1| ABC transporter amino acid-binding protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 352

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 19/321 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
               + L   K RG ++  ++ G+ G +     G W G D D  RA+++A  +D   I +
Sbjct: 50  PATTATLRSAKVRGAVRVAVSQGVRGLSLRTPAGRWTGLDTDIARAVAAAALEDAEAIDW 109

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ A +R   L+S + D+   N  WT+ RE +  + F  IT +DG+GF++    G++  
Sbjct: 110 VPVRATDRLRTLESGRADLTVCNLTWTMGREATGAVLFAGITCYDGEGFLVRAADGLADP 169

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G  + V  G TT + L  ++    ++  P+ F+   +  AAY    C AY  D +A
Sbjct: 170 ADLAGRRLAVHNGCTTVVNLESWYGPLGLEVEPVGFDDPADALAAYACGDCAAYVLDRTA 229

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   +    RP +H ILP  IS+ P+A A+ + D  W+ +V W    +V AE  G     
Sbjct: 230 LAGARACLPRPQDHRILPVSISREPMAAAVHEADPHWFRLVRWVLQLLVAAEHEGPEAA- 288

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
                         R      +   G + GL + W  R++  +G YG++++RNLG  S L
Sbjct: 289 -------------ARL-----AGPHGPSAGLDEKWADRVLSAVGTYGDVYERNLGAASGL 330

Query: 321 KIPRGYNALWSKGGLMYAPPI 341
            +PRG N LW+ GGL YA P+
Sbjct: 331 DVPRGVNELWTAGGLHYAVPL 351


>gi|193083904|gb|ACF09583.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote KM3-72-G3]
          Length = 470

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/365 (31%), Positives = 172/365 (47%), Gaps = 38/365 (10%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CRA+++A+  
Sbjct: 107 AAGIAEATPVSTLDTIVDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 166

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 167 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 226

Query: 133 KKKGIS---SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
                    S  QL+ A ICV  GTTTE  + D+F + N+++  +      E  A +   
Sbjct: 227 SDAYEYGTGSADQLNNAEICVGIGTTTEGNMVDWFSSRNIQFTSVPVADAAEATAKFIDG 286

Query: 190 RCDAYTGDISALYALKLTND----------RPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            CDA+TGD+SA+ A K   D           P    I  +++SK PL  A    D+++ +
Sbjct: 287 SCDAFTGDMSAMVAKKWQLDGDASMVDDNGDPVSIWIAQELMSKEPLGAATRDMDSDFKD 346

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK---------DTTNPDVQRFLGIDKSSNIGEALG 290
           +V+W  Y MVTAEE+G+T  N    +           T++P + R L  +          
Sbjct: 347 VVAWVWYGMVTAEEMGVTAANAADSAATACALNEGGATSDPGMCRLL-TENLGLGTATNP 405

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMY 337
           L  DW   ++   GNYGE +D    +            S   I R    NAL S+GG+ Y
Sbjct: 406 LAGDWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSDAMSGCLISRSGTLNALVSEGGIQY 465

Query: 338 APPIR 342
           AP +R
Sbjct: 466 APAMR 470


>gi|193083731|gb|ACF09418.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote
           SAT1000-15-B12]
          Length = 374

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 15/339 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
              T+ +   S L  I  RG +KCG+     G   +  +G + G D+++C+AL++AI  D
Sbjct: 40  AAGTADAQLVSTLDTIIARGSMKCGVKDSQFGMGFLNDDGTYSGLDIEYCKALAAAIGVD 99

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
              I+Y+      RF  L S +ID+L R T WT  R+  L   F  + ++DGQG +++  
Sbjct: 100 --SIEYILATGSNRFELLASHEIDVLIRTTTWTTSRDAGLNADFAGMNFYDGQGMLVNTG 157

Query: 134 ---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                G +S   L GA+ICV  GTTTE  L DY++ + M+   I  E        +    
Sbjct: 158 PDHFPGATSALDLDGANICVGIGTTTEGNLLDYYELNQMQMTTINTENAAAAQENFLDGS 217

Query: 191 CDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           C  +TGD+SA+ A             I+P+++SK PL  A    D +W ++V+W  Y M+
Sbjct: 218 CGVWTGDMSAMVARMYGLRDEGMSLAIMPELLSKEPLGAATRDNDDDWNDVVAWVWYGMI 277

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
           TAEE GI   N      ++ NP + R L         +   L+  W   ++  +GNY + 
Sbjct: 278 TAEEFGIDGSNYMDFV-NSENPGINRLL-NSNLGLGTDDNPLSDTWMQSVLGAVGNYHDA 335

Query: 310 FDRNLGNQ----SELKIPRG--YNALWSKGGLMYAPPIR 342
           +DR+  +     +   I R    NAL S+GG+ YAPP+R
Sbjct: 336 YDRSFCDGDGGMNNCLISRAGTLNALVSEGGIQYAPPMR 374


>gi|193084366|gb|ACF10022.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote AD1000-18-D2]
          Length = 394

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 29/356 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CRA+++A+  
Sbjct: 40  AAGIAEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 99

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 100 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 159

Query: 133 KKKGISSVSQ-----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           +    ++ +      L GA+ICV  GTTTE  + D+F + N+ +  +      E  A + 
Sbjct: 160 EDAYSAAGAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFI 219

Query: 188 AHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              CDA+TGD+SA+ A K   D        +  I  +++SK PL  A    D+++ ++V+
Sbjct: 220 DGSCDAFTGDMSAMVAKKWQLDGDGSMNGVDIWIAQELMSKEPLGAATRDMDSDFKDVVA 279

Query: 243 WTHYAMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           W  Y MVTAEE+G+T  N    +    D ++P + R L  +       A  L  DW   +
Sbjct: 280 WVWYGMVTAEEMGVTAANAADSAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAV 338

Query: 300 IRHMGNYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMYAPPIR 342
           +   GNYGE +D    +            +   I R    NAL S+GG+ YAP +R
Sbjct: 339 LATAGNYGEAYDDAFCDGTYDGVSGSDAMTGCLISRSGTLNALVSEGGIQYAPAMR 394


>gi|256395455|ref|YP_003117019.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256361681|gb|ACU75178.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 321

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L   +  G ++  ++ G+ G +   A G W+G D D  RA+++A   D   + +L     
Sbjct: 25  LAAARATGTVRAVVSRGIRGLSSPDAAGVWRGLDTDMARAVAAAAIGDGEAVSWLSTEPA 84

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   L + + D++  N  WTL RE + G+ F  +T +DG+GF++    GI+  +QL+G 
Sbjct: 85  ARLDRLVAGEADLVVSNLTWTLGRETA-GVLFAGVTCYDGEGFLVRASDGITDPAQLAGR 143

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +  QAGTT+   LA +F +  +   PI +    +  A Y +  C AY  D  AL   + 
Sbjct: 144 QVATQAGTTSAANLAAWFGSRGLAVTPIAYPTPADALAGYASGDCAAYVLDCVALAGERA 203

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
             D P EH IL   IS+ P+A A+   D EW+ +  W    ++ AE              
Sbjct: 204 ALDDPGEHRILDTTISREPMAMAVRDDDAEWFRLCRWVLQFLIAAEHAE----------- 252

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
                +  R      +   G ALGL ++W  R++  +G YG+++ RNLG  S L +PRG 
Sbjct: 253 --DPAEAAR-----DAGRHGPALGLDENWAARVLDAVGTYGDVYARNLGPASGLDVPRGL 305

Query: 327 NALWSKGGLMYAPPI 341
           NALW++GGL Y  P+
Sbjct: 306 NALWTEGGLHYPMPL 320


>gi|193084292|gb|ACF09951.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote KM3-130-D10]
          Length = 394

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/356 (31%), Positives = 174/356 (48%), Gaps = 29/356 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CRA+++A+  
Sbjct: 40  AAGIAEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 99

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 100 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 159

Query: 133 KK-----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           +         +S   L GA+ICV  GTTTE  + D+F + N+ +  +      E  A + 
Sbjct: 160 EDVFPAAAAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFI 219

Query: 188 AHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              CDA+TGD+SA+ A K   D        +  I  +++SK PL  A    D+++ ++V+
Sbjct: 220 DGSCDAFTGDMSAMVAKKWQLDGDDSMGGVDIWIASELMSKEPLGAATRDMDSDFKDVVA 279

Query: 243 WTHYAMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           W  Y MVTAEE+G+T  N    +    D ++P + R L  +       A  L  DW   +
Sbjct: 280 WVWYGMVTAEEMGVTAANAAASAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAV 338

Query: 300 IRHMGNYGEMFDRNLGNQ-----------SELKIPR--GYNALWSKGGLMYAPPIR 342
           +   GNYGE +D    +            +   I R    NAL S+GG+ YAP +R
Sbjct: 339 LATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAPAMR 394


>gi|161170240|gb|ABX59211.1| substrate-binding protein [uncultured marine group II euryarchaeote
           EF100_57A08]
          Length = 439

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 174/351 (49%), Gaps = 34/351 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS-KIQYLP 82
           S +  I +RG LKCG+     G   +  A G   G D+ +CRAL++AI  DP   I+++P
Sbjct: 90  STMDVILERGMLKCGVKESQYGMGYLDSATGVRSGLDISYCRALAAAIGLDPMTDIEFVP 149

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----IS 138
            ++++RF  L S +ID+L R T WT  R+  L   F  + +FDGQG ++ +         
Sbjct: 150 ASSQDRFEKLASGEIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILIREDTYPQGLTQ 209

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + + L+ A +CV  GTTTE  LAD+  ++++    I      E  A  ++  CDA+TGD+
Sbjct: 210 TATMLTSAKVCVGTGTTTEGNLADFDTSNSVGMDIIGVVDAAEGTAKLQSGECDAFTGDM 269

Query: 199 SALYALKLTNDR----------PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           SA+ A K   D           P    I P+I+SK PL  A    D +W ++V+W  Y M
Sbjct: 270 SAMVAKKWALDNDGTVVDDNGDPVGLWIAPEILSKEPLGAATRDNDDDWNDVVAWVWYGM 329

Query: 249 VTAEELGITQKNINQVSKDTT----NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
           VTAEE GIT  N   ++ D      NP   R +         +A  L   W   ++  +G
Sbjct: 330 VTAEEYGITSANYMTMASDAAAEGGNPGHNRLMNT-NLGLGTDANPLADTWMQAVMGAVG 388

Query: 305 NYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMYAPPIR 342
           NYGE +D    +            +   + R    NAL S+GGL +APP+R
Sbjct: 389 NYGEAYDDAFCDGTYDGSSGSDTMTGCLLDRAGTANALVSEGGLQFAPPMR 439


>gi|320106917|ref|YP_004182507.1| family 3 extracellular solute-binding protein [Terriglobus
           saanensis SP1PR4]
 gi|319925438|gb|ADV82513.1| extracellular solute-binding protein family 3 [Terriglobus
           saanensis SP1PR4]
          Length = 336

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 7/338 (2%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           VS+L L +    +       L  ++  G L CG+      +     +G   GFD+D C+A
Sbjct: 4   VSLLLLAVCSSLTLGAQ-QTLQKVRAAGVLTCGVIAEDAEYNTEDDHGSRGGFDLDLCKA 62

Query: 67  LS-SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           ++ +A+ +         L+ K    AL + +ID L            +  L       +D
Sbjct: 63  VAVAALGEKAQTKVITFLDDKSGVDALIAGKID-LIATLSADFSHTTNASLGESAPVLYD 121

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G GF++ +K GI+  + L+   +C  A T  E  L  +F   ++   P  F+   E++AA
Sbjct: 122 GVGFLVLRKSGIAHAADLTHRKVCFLAETNVETALQAWFTRQHLDLLPFPFQEEGEMEAA 181

Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           Y    C A  GD++ L   + + + +  +H+ILP++I+  PLA A    D +W  IV WT
Sbjct: 182 YITKNCAAIAGDLTRLAQTRASFETQAPDHMILPEVIAADPLAFAYRSSDPQWGRIVDWT 241

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
              +   E LG+T  NI+ +S  + +P V+  LG   +  +G  LGL++DW   ++R +G
Sbjct: 242 AQVLFHGEALGVTSANID-ISAKSADPAVRHLLGATHA--VGTPLGLSEDWAASVLRSVG 298

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NY E+FDR  G  S L + RG N L S+GGL+   P++
Sbjct: 299 NYREVFDRTFGEASTLSLTRGRNRLTSEGGLILPLPLK 336


>gi|323165231|gb|EFZ51021.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           sonnei 53G]
          Length = 254

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 117/253 (46%), Positives = 171/253 (67%), Gaps = 1/253 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +T +DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAE 252
           IV WT +AM+ AE
Sbjct: 241 IVRWTLFAMLNAE 253


>gi|170516837|gb|ACB15239.1| hypothetical protein [uncultured marine group II euryarchaeote
           DeepAnt-15E7]
          Length = 393

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 111/363 (30%), Positives = 172/363 (47%), Gaps = 36/363 (9%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CR +++A+  
Sbjct: 32  AAGIAEATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGL 91

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 92  NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 151

Query: 133 -----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                 +   +S S L+GA+ICV  GTTTE  + D+F +  + +  +      E  A + 
Sbjct: 152 EDAFGAEASGNSASALNGANICVGIGTTTEGNMVDWFSSRGIAFTSVPVADAAEATAKFI 211

Query: 188 AHRCDAYTGDISALYALKLTND-----------RPSEHVILPDIISKSPLAPAIIQGDTE 236
              CDA+TGD+SA+ A K   D                 I  +++SK PL  A    D++
Sbjct: 212 DGSCDAFTGDMSAMVAKKWQLDGDASMGVDENGDAIGIWIASELMSKEPLGAATRDMDSD 271

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLT 292
           + ++V+W  Y MVTAEE+G+T  N    +     D ++P + R L  +          L 
Sbjct: 272 FKDVVAWVWYGMVTAEEMGVTAANAAASATAACADGSDPGMCRLL-TENLGLGTATNPLA 330

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQ-----------SELKIPR--GYNALWSKGGLMYAP 339
            DW   ++   GNYGE +D    +            +   I R    NAL S+GG+ YAP
Sbjct: 331 GDWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAP 390

Query: 340 PIR 342
            +R
Sbjct: 391 AMR 393


>gi|329295742|ref|ZP_08253078.1| amino-acid ABC transporter-binding protein yhdW precursor [Plautia
           stali symbiont]
          Length = 216

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 2/218 (0%)

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F  + Y+DG GF+ HKK  + S  +L GA++C+Q GT TEL +ADYFKA+ M+Y P
Sbjct: 1   MGFLFAGVNYYDGIGFLTHKKASLKSAKELDGATVCIQVGTDTELNVADYFKANKMQYTP 60

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F+R +E   A  + RCD  + D S LYA ++   +P + ++L ++ISK PL P + +G
Sbjct: 61  VTFDRSDESAKALDSGRCDTLSSDQSQLYAQRIKLGKPDDFIVLAEVISKEPLGPVVRRG 120

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293
           D +W+ IV W+ +AM+ AEE+GI+ K++++++   T PD+   LG +   + G+ L L  
Sbjct: 121 DDDWFTIVKWSLFAMLNAEEMGISSKSVDEMAAKPTTPDMAHLLGAE--GDFGKDLKLDN 178

Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331
              Y II+ +GNY E+FDRN+G  S LKI RG NALW+
Sbjct: 179 KCAYNIIKQVGNYQEVFDRNVGKDSALKIARGQNALWN 216


>gi|7381255|gb|AAF61456.1|AF139661_1 putative amino acid ABC transporter binding protein [Azospirillum
           brasilense]
          Length = 236

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 137/235 (58%), Gaps = 4/235 (1%)

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAH 167
            R+ + G+ F  +  FDGQGFI H+ +GI+ +S L  GAS+CV   TTT   L D+    
Sbjct: 2   QRDATFGIDFPAVYLFDGQGFIAHRAQGIARLSDLPPGASVCVIEQTTTLRNLEDWMART 61

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPL 226
            +++        E   +A+  H CD YT D   L+A +L       ++VILP+ ISK PL
Sbjct: 62  GLRFRLKPVRSTEGALSAFFNHHCDLYTSDRIGLHAQRLLKAPEREDYVILPEAISKEPL 121

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
            P +   +  W+++V W   A V AEE GIT  N  ++ ++  +P+V+RFLG   ++ +G
Sbjct: 122 GPMVRPDERRWFDVVRWVFLATVLAEEKGITTANAARLKEEAQDPEVRRFLGA--TAGVG 179

Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             LGL   W +R++  +GNYGE+FDR+LG  S L I RG N LW  GGL YAPP+
Sbjct: 180 WGLGLDDGWAFRVVTQVGNYGEIFDRHLGAASPLGIDRGMNGLWMNGGLHYAPPL 234


>gi|159904020|ref|YP_001551364.1| hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT
           9211]
 gi|159889196|gb|ABX09410.1| Hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT
           9211]
          Length = 215

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 86/216 (39%), Positives = 130/216 (60%), Gaps = 6/216 (2%)

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K   ISS+  L    ICV +GTTTE  + D F+A ++ Y PI ++ + ++ A Y   
Sbjct: 1   MVKKNSSISSIDDLVNQPICVGSGTTTEQNINDAFEARSIPYTPIKYQDLNQVVAGYLQG 60

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RC A T D S L A +     P EH+IL DI+SK PLAPA +  D +  + + W  Y+++
Sbjct: 61  RCAAMTSDRSQLAAARSGFSNPKEHIILKDILSKEPLAPASLGADQKLGDAMRWVIYSLI 120

Query: 250 TAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305
           +AEE GIT+ NIN+  K    +     ++RFLG++   ++GE +GL   +   +IR  GN
Sbjct: 121 SAEEKGITKVNINEKLKTAKANPQLKPLRRFLGVE--GDLGEKIGLDNSFVVNVIRATGN 178

Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           YGE+++R+LG  S + IPRG N L+ KGG+  +PP 
Sbjct: 179 YGEIYNRHLGPNSNVPIPRGLNELYIKGGVQISPPF 214


>gi|260223278|emb|CBA33680.1| General L-amino acid-binding periplasmic protein aapJ [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 173

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 3/175 (1%)

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLA 227
           M   PIVFE++E  + AY + RC AYT D S L + +      P++HVILP++ISK PL 
Sbjct: 1   MNIKPIVFEKLEAAEGAYFSGRCVAYTTDASGLASTRNKVAKNPADHVILPELISKEPLG 60

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
           P + +GD EW  IV WT Y ++ AEE G+TQ N++ +  +T +P V R LG   + + G+
Sbjct: 61  PMVRRGDDEWTAIVKWTVYGLLEAEENGVTQANVDDLKANTKDPVVGRLLGT--TEDTGK 118

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            LGL K+W  R I+  GNYGE+F+RN+G +S L++PRG N LWSKGG+ YAPP+R
Sbjct: 119 LLGLDKEWLARAIKTTGNYGEIFERNVGPKSPLQLPRGLNNLWSKGGVQYAPPVR 173


>gi|262165601|ref|ZP_06033338.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
 gi|262025317|gb|EEY43985.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
          Length = 166

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 3/169 (1%)

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +VF+   +    + A RCD  T D S LYAL+L  ++P   ++LP+IISK PL P + Q 
Sbjct: 1   MVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSALVLPEIISKEPLGPVVRQD 60

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293
           D +W+N+  W  YAMV AEE GIT KN++++ K + NP+V+R LG+D     G  LG+  
Sbjct: 61  DDKWFNVAKWVLYAMVNAEEYGITSKNVDEMMK-SDNPEVKRILGLDGPKGTG--LGIRD 117

Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           DW+Y+I++ +GNYGE F+R +G+ S L+I RG NALW+ GG MYAPPIR
Sbjct: 118 DWSYQIVKQVGNYGESFERTVGSGSPLQIDRGVNALWNAGGFMYAPPIR 166


>gi|218516840|ref|ZP_03513680.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
          Length = 211

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 118/211 (55%), Positives = 167/211 (79%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFDVDFC+A++SA+F D
Sbjct: 1   MALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFDVDFCKAVASAVFGD 60

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR + Y+DGQGF++ K 
Sbjct: 61  PTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRFVNYYDGQGFMVRKS 120

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E++AAY A RCD Y
Sbjct: 121 LNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEVNAAYDAGRCDVY 180

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSP 225
           T D S LY+L+LT   P EH ILP+IISK P
Sbjct: 181 TTDQSGLYSLRLTLKNPDEHAILPEIISKEP 211


>gi|47079429|gb|AAT10172.1| periplasmic substrate binding protein [uncultured marine group II
           euryarchaeote DeepAnt-JyKC7]
          Length = 373

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 100/320 (31%), Positives = 156/320 (48%), Gaps = 16/320 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS-KI 78
           +T  S L  I  RG +KCG+     G   + A  G   G D+ +CR +++A+  +P   I
Sbjct: 46  ATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGLNPDTDI 105

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-----IMHK 133
           +Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG      +   
Sbjct: 106 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDVFPA 165

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
               +S + L+GA+ICV  GTTTE  + D+F + N+ +  +      E  A +    CDA
Sbjct: 166 ADAGNSAAGLNGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSCDA 225

Query: 194 YTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +TGD+SA+ A K   D           I  +++SK PL  A    D+++ ++V+W  Y M
Sbjct: 226 FTGDMSAMVAKKWQLDGDDSMGGVGIWIAQELMSKEPLGAATRDMDSDFKDVVAWVWYGM 285

Query: 249 VTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305
           VTAEE G+T  N   ++    D ++P V R L  +          L   W   +++  GN
Sbjct: 286 VTAEENGVTAANAADMAAAACDGSDPGVCRLL-TENLGLGTTDNPLAGTWMQAVLQAAGN 344

Query: 306 YGEMFDRNLGNQSELKIPRG 325
           YGE +D    + +   +   
Sbjct: 345 YGEAYDDAFCDGTYDGVSGS 364


>gi|117618623|ref|YP_855303.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560030|gb|ABK36978.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 278

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 10/247 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V    L+ L   S + +A    L  IK R  L  G+ T    F  V   G++ G
Sbjct: 1   MKKITSVLFSALLGLGLASGAAHAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGNYVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD D  R  +  +  D +K++++ +    R   LQS ++D++  N   T  R     + F
Sbjct: 61  FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPER--RQVVDF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      ++ +      +  L+  ++ V  GTT ++ L      ++  +  + FE+
Sbjct: 119 TNPNLRVAVQVLVPQGSPAKQLDDLASKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A    R DAY  D   L++     + P   V+   + S+ P+APA+ +G+ E  
Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWA--KENPGYRVLPEKLGSEDPIAPAVKKGNIELR 232

Query: 239 NIVSWTH 245
           + V+   
Sbjct: 233 DWVNDRL 239


>gi|218888235|ref|YP_002437556.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218759189|gb|ACL10088.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 271

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +   V +   + +  T    +A  + DIK RG L CG+    V F  +        GF
Sbjct: 1   MKR--LVLLAVALCVVLTGTMAHAGKIEDIKARGALVCGVKDSTVPFGYIDEQSKQIVGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D C+A++  +      ++   + +  R   L    +D+++        R+    + F 
Sbjct: 59  DIDICKAVADKLGVK---LELKTVTSATRIPMLTQGSVDMVAATMTHKFERD--DVIDFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + DGQ  ++ K  G+ S + L G  +    G+T+E  +    KA   +   + F+  
Sbjct: 114 ITYFMDGQKLLVKKGGGVKSAADLKGKKVATAKGSTSEKNI----KAAQPEATVVSFDEY 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  + +A T D + L  L+ ++  P +  I+ D IS  P    + + D+++ +
Sbjct: 170 PQAFLALKQGKAEAVTTDSTILLGLRNSDPEPDKWEIVGDYISPEPYGLGLAENDSKFRD 229

Query: 240 IVSWTHYAMVTAEEL 254
           +V+ T   +  + E 
Sbjct: 230 LVNRTLVDLWNSGEY 244


>gi|239826929|ref|YP_002949553.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
 gi|239807222|gb|ACS24287.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
          Length = 286

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 36/282 (12%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNASI------------------LGDIKKRGF 35
           M +            I  L I      S+ +S                   L  IKKRG 
Sbjct: 1   MKRKIVWKMWITLALIALLSITALAGCSSESSTSNKGDGAKSTETSGGTNTLEKIKKRGK 60

Query: 36  LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G+   L  F       G  +GFD+D  + L+  I  D +KI+   + +K R   L +
Sbjct: 61  LVVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNN 120

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAG 153
            +ID +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G
Sbjct: 121 GEIDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKG 178

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   +           + + FE   E   A +A + DA T D + L  +   +     
Sbjct: 179 STSAQNIRKVAPE----VNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN--- 231

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +L +  ++ P   A+ +GD E+  +++     +    E  
Sbjct: 232 YRVLDETFTEEPYGIAVRKGDKEFLQVINEYLKEIKENGEYD 273


>gi|78356474|ref|YP_387923.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218879|gb|ABB38228.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 271

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 12/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +   +++   + + F++ + +A  + +IK RG L  G+   +V F  V  N     GF
Sbjct: 1   MKRLLLIAV--ALGMIFSAATASAGKIEEIKDRGVLVAGVKDSVVPFGFVDENSKQLVGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR ++  +  +   ++   + +  R   +    +DI +        R+    + F 
Sbjct: 59  DVDICRYIAGQLGVE---LELKTVTSATRIPMVTQGSVDIAAATMTHKHERD--NVIDFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + DGQ  ++ K  GI+SV+ L G  +    G+T+E  +    KA       + F+  
Sbjct: 114 ITYFMDGQKILVAKDSGINSVADLKGKKVATVKGSTSEKNI----KAAQPDCRVLSFDEY 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  +  A T D + L  LK ++  P + VI  D IS  P    + + D+++ +
Sbjct: 170 PQAMLALKQGKASAVTTDSTILLGLKNSDPEPEKWVIAGDYISAEPYGLGLPENDSDFRD 229

Query: 240 IVSWTHYAMVTAEELG 255
            V+     M  + E  
Sbjct: 230 FVNKALNDMWRSGEYE 245


>gi|332041717|gb|EGI78069.1| extracellular solute-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 297

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 5/257 (1%)

Query: 1   MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   VS   + +    +   +     L  IK  G +  G+       +    +G + G
Sbjct: 1   MKKHLLVSAFAVALATLAAGVQAQANDTLAKIKSSGKVVMGVRESSPPLSYTLGDGKYTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           + V+ C+ +  +I    + ++Y P+ +  R   +Q+  +DI   +T     R+    ++F
Sbjct: 61  YHVELCQNILKSI-APGAAVEYTPVTSANRIPLVQNGTVDIECGSTTNNATRQK--DVSF 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              TY       +     I S++ L G ++    GTT+   L  + +  ++K+  +  + 
Sbjct: 118 ALTTYVTEVRTAVKSTSKIKSIADLEGKTVATTTGTTSVALLRKHKRGADIKFTEVYGKD 177

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +      + R DA+  D + L  L   +  P + VI+ + ++  P+A  + + D  + 
Sbjct: 178 HADSFLLLESGRADAFVMDDNLLAGLIAGSKNPKDFVIVGETLNVEPIAIMVRKDDPAFK 237

Query: 239 NIVSWTHYAMVTAEELG 255
             V     A + + EL 
Sbjct: 238 KAVDDYIRAAIKSGELN 254


>gi|239909117|ref|YP_002955859.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
 gi|239798984|dbj|BAH77973.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
          Length = 272

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 10/256 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K   +++L  +     +    A  L DIK RG L  G+      F  V        GF
Sbjct: 1   MRKAARLTVLACLFTLVAAMPALAGKLDDIKSRGTLVAGVKDSQRPFGFVDEKTNQIVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  +AL++ +    +K++  P+ +  R   L    +DI++        RE    + F 
Sbjct: 61  EIDLMQALATRL---NAKLELKPVTSSTRIPMLTQGAVDIVAATMTHKKERE--DQVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ  ++ K  GI SV+ L+G  +    G+T+E  +    K        I FE  
Sbjct: 116 ITYFMTGQKLLVKKDGGIKSVADLAGKKVGSVKGSTSEQNV----KKAQPDCTVISFETY 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +  +  A T D S L  +K ++D+P    I+ + IS  P    + + D+++ +
Sbjct: 172 PEAFLALKQGKVQAVTTDESILVGIKNSDDKPEAWDIVGEYISPEPYGLGVAENDSDFRD 231

Query: 240 IVSWTHYAMVTAEELG 255
            V+     M    E  
Sbjct: 232 FVNAALMDMWEKGEYQ 247


>gi|258406273|ref|YP_003199015.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257798500|gb|ACV69437.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 273

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K   + +   +       +  A  L +IK+RG++  G+   +V F  V  +  +  GF
Sbjct: 1   MRKMVLLLVAMTVTCTLALGTAWADKLEEIKERGYMVAGVKDAVVPFGYVDKDTNNIVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+ L+  +  D   ++  P+ +  R   L    +DIL+        RE    + F 
Sbjct: 61  DVDICKELADKLGVD---LRLKPVTSSTRIPMLAQGSVDILAATMTHKFSRE--DSIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ  ++ K   ISS + L+G  +    G+T+E  +    K    +   + FE  
Sbjct: 116 TTYFMTGQKLLVKKDSDISSTADLAGKKVGTAKGSTSEKNI----KEAQPESRVLSFEGY 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A R  +  A T D + L  LK +   P ++ I+ + IS  P    + + ++ + +
Sbjct: 172 PQAFLALRQGKVKAVTTDATILLGLKNSAPDPDKYAIVGEYISDEPYGLGVPENESNFRD 231

Query: 240 IVSWTH-YAMVTAEELGITQK 259
            V+ +     V  E   I  K
Sbjct: 232 FVNRSLAKMWVNGEYQEIYSK 252


>gi|295400877|ref|ZP_06810853.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977140|gb|EFG52742.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 284

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 34/280 (12%)

Query: 1   MYKDF---------FVSILCLIILFFTS--------------FSTNASILGDIKKRGFLK 37
           M +             ++L + +L                   S+  + L  IKKRG L 
Sbjct: 1   MKRKTIWKMCMALALTALLSITVLAGCGSESSTTDKGDGSTKTSSETNTLEKIKKRGKLV 60

Query: 38  CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G+   L  F       G+ +GFD+D  + L+  I  D +KI+   + +K R   L + +
Sbjct: 61  VGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGE 120

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTT 155
           ID +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G+T
Sbjct: 121 IDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKGST 178

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   +    +    + + + FE   E   A +A + DA T D + L  +   +     + 
Sbjct: 179 SAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN---YR 231

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +L +  ++ P   A+ +GDTE+  +++     +    E  
Sbjct: 232 VLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGEYD 271


>gi|315928341|gb|EFV07656.1| Putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 279

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     +V+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDEVK 268


>gi|153953344|ref|YP_001394109.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM
           555]
 gi|219853973|ref|YP_002471095.1| hypothetical protein CKR_0630 [Clostridium kluyveri NBRC 12016]
 gi|146346225|gb|EDK32761.1| Predicted extracellular amino acid-binding protein [Clostridium
           kluyveri DSM 555]
 gi|219567697|dbj|BAH05681.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 268

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 89/251 (35%), Gaps = 13/251 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K F     ++ L+ +  T        N +   DIK +G    G++            G
Sbjct: 1   MKKKFGILTIVIFLMGILLTGCGQTQKSNDTSWDDIKAKGKFVVGLDDSFPPMGFRDEKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D  +A +  +      +++ P+      L+L +K ID++      T  R+   
Sbjct: 61  QIVGFDIDMAKAAAEKLGVK---VEFKPVEWDGVILSLNNKDIDVIWNGLTITEERKK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F  +   + Q  ++ K   I+S   LSG ++ +Q G+++E  L              
Sbjct: 116 QIVFSKVYLQNKQIIVVQKNSTINSKKDLSGKTVGLQMGSSSEKALNADADTSKSLKEVR 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E        R DA   D   +        +P  + IL D          I + D
Sbjct: 176 KYSNNTEALLDLSQGRTDAVIVDE--VVGRYYIEKKPDLYKILDDNFGVEDYGVGIRKTD 233

Query: 235 TEWYNIVSWTH 245
           T +   +    
Sbjct: 234 TSFKEKLDEAL 244


>gi|56420512|ref|YP_147830.1| glutamine ABC transporter glutamine-binding protein [Geobacillus
           kaustophilus HTA426]
 gi|261420185|ref|YP_003253867.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC61]
 gi|297529846|ref|YP_003671121.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           C56-T3]
 gi|319766997|ref|YP_004132498.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC52]
 gi|56380354|dbj|BAD76262.1| glutamine ABC transporter (glutamine-binding protein) [Geobacillus
           kaustophilus HTA426]
 gi|261376642|gb|ACX79385.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC61]
 gi|297253098|gb|ADI26544.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           C56-T3]
 gi|317111863|gb|ADU94355.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC52]
          Length = 281

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 111/277 (40%), Gaps = 31/277 (11%)

Query: 1   MYKD---FFVSILCLIILFFTS-----------------FSTNASILGDIKKRGFLKCGI 40
           M K    +++++    +L   +                  +   + L  IK+RG L  G+
Sbjct: 1   MRKKAWKWWIAVALTALLSAVALTGCSTTDKGEGGTSSETAKATNTLEKIKQRGKLIVGV 60

Query: 41  NTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
              L  F       G  +GFD+D  + L+  I  D +KI+   + +K R   L + +ID 
Sbjct: 61  KYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGEIDA 120

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTEL 158
           +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G+T+  
Sbjct: 121 IIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSPINSVKDLKKGMTVLTAKGSTSAE 178

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +         + + + FE   E   A +A + DA T D + L+ +   +     + +L 
Sbjct: 179 NIRKVAP----QVNVLEFENYAEAFTALKAGQGDALTTDNALLWGMAKQDPN---YRVLD 231

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +  ++ P   A+ +GD E   +++     +    E  
Sbjct: 232 ETFTEEPYGIAVRKGDKELLQVINEYLKEIKENGEYD 268


>gi|312111273|ref|YP_003989589.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
 gi|311216374|gb|ADP74978.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
          Length = 284

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 34/280 (12%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNAS-------------------ILGDIKKRGFLK 37
           M +      ++++    +L  T  +   S                    L  IKKRG L 
Sbjct: 1   MKRKTIWKMWMALALTALLSITVLAGCGSESSTTDKGDGSTKTSSETNTLEKIKKRGKLV 60

Query: 38  CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G+   L  F       G+ +GFD+D  + L+  I  D +KI+   + +K R   L + +
Sbjct: 61  VGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGE 120

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTT 155
           ID +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G+T
Sbjct: 121 IDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKGST 178

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   +    +    + + + FE   E   A +A + DA T D + L  +   +     + 
Sbjct: 179 SAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN---YR 231

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +L +  ++ P   A+ +GDTE+  +++     +    E  
Sbjct: 232 VLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGEYD 271


>gi|157415241|ref|YP_001482497.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116]
 gi|283956380|ref|ZP_06373860.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336]
 gi|157386205|gb|ABV52520.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116]
 gi|283792100|gb|EFC30889.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336]
 gi|307747883|gb|ADN91153.1| Surface antigen, CjaA [Campylobacter jejuni subsp. jejuni M1]
 gi|315932110|gb|EFV11053.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 327]
          Length = 279

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 115/279 (41%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   +++   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVVVVLAACGGNSDSKTLNSLDKIKQNGVIRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPDIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMAIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|226938961|ref|YP_002794032.1| GltI [Laribacter hongkongensis HLHK9]
 gi|226713885|gb|ACO73023.1| GltI [Laribacter hongkongensis HLHK9]
          Length = 298

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 100/257 (38%), Gaps = 7/257 (2%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
              VS L   ++   + +      L  ++++G    G     + F+ + AN    G+ +D
Sbjct: 6   RLLVSALAASVVATPALAAELTGTLKKVQEKGEFVIGHRESSIPFSYLDANQKPVGYMMD 65

Query: 63  FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  +++ +  +        + +P+ ++ R   + +  +DI   +T  +L R+  +   F
Sbjct: 66  ICNRIAAEVKKEAGAKGAVTRLVPVTSQTRIPLMTNGTVDIECGSTTNSLERQKQVA--F 123

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y      ++    GI S+S L G  +    GTT++  +  + K  N+    +  + 
Sbjct: 124 SVTPYITSIRMLVKADSGIKSLSDLDGKPVVTTTGTTSDRYIKQHEKGQNLNVKNVYGKD 183

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        R  A+  D   L  L   +  P E  I+ + +S  P    + + D +  
Sbjct: 184 HADSFLMVSTGRASAFVMDDVLLAGLIANSKNPKEFSIVGETLSVEPYGVMMRKDDPQLK 243

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      M+ + EL 
Sbjct: 244 AVVDRVIVGMMKSGELD 260


>gi|121611643|ref|YP_999450.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121556283|gb|ABM60432.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 296

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ +   +LF  + +  A  L  I + G +        V F+ +       GF 
Sbjct: 1   MKRSVLMASMAAAVLFSATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGANKPIGFS 60

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           V+   A+  A+         ++  +P+ ++ R   L +  +D+   +T     R   +  
Sbjct: 61  VELSNAVVEAVKKKLNKPNLQVALMPVTSQNRIPLLTNGTVDLECGSTTNNSARGKDVA- 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   +  K   I   + L+  ++    GTT    +  Y    N+    ++ 
Sbjct: 120 -FAVNHFYTGTRLLAKKSSKIKDYADLAKKTVASTTGTTNAQVMRKYNADKNLGMDIVLG 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D   L+ L   +  P+++ ++ + +   P A  + + D  
Sbjct: 179 KDHADAFLLVESDRVVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   M+ + E  
Sbjct: 239 FKKLVDDTFIDMMKSGEFE 257


>gi|145297676|ref|YP_001140517.1| ABC-type glutamine/glutamate transporter, periplasmic binding
           protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850448|gb|ABO88769.1| ABC-type glutamine/glutamate transporter, periplasmic binding
           protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 278

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 12/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V    LI L   S +  A    L  IK R  L  G+ T    F  V   G + G
Sbjct: 1   MKKITSVLFSALIGLGLASGAAQAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGSYVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD D  R  +  +  D +K++++ +    R   LQS ++D++  N   T  R     + F
Sbjct: 61  FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPER--REVVDF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      ++ +      +  L+  ++ V  GTT ++ L      ++  +  + FE+
Sbjct: 119 TNPNLRVAVQVLVPEGSPAKGLGDLADKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEW 237
             E   A    R DAY  D   L++     + P  + +LP+ +    P+APA+ +G+ E 
Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWA--KENPG-YRVLPEKLGAEDPIAPAVKKGNIEL 231

Query: 238 YNIVSWTH 245
            + V+   
Sbjct: 232 RDWVNERL 239


>gi|269120152|ref|YP_003308329.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
 gi|268614030|gb|ACZ08398.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
          Length = 283

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K  F+S++ L++             +  +  +  I+KRG L  G+ T    F  +   
Sbjct: 1   MKKLLFLSLMVLVLFVSCGNKNTDDNNAKTSGEIEKIQKRGKLIVGVFTDKPPFGFINEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+   +  +  +  D +KI+++P+ A  R   LQS ++DI+  N   T  RE  
Sbjct: 61  NENDGFDIALAKQFAKDLLGDENKIEFVPVEAASRVPFLQSDKVDIIMANMTVTPDREKV 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F           + + K  I S++ L G  + V  GTT ++    +F  +      
Sbjct: 121 --VDFANPYMKVAIQILGNDKDNIKSLNDLKGKKLIVNKGTTADI----FFTKNYPDIEL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F+   E   A +  R  A   D   LYA   T   P   ++   +   SP+APA+ +G
Sbjct: 175 LRFDHNTEAFQALKDGRGVALAHDSLLLYAWAQT--NPGFTIVNEKLEEPSPIAPAVKKG 232

Query: 234 DTEWYNIVSWTHY 246
           + E    ++    
Sbjct: 233 NNELREWINNELT 245


>gi|86150666|ref|ZP_01068887.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596418|ref|ZP_01099655.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562598|ref|YP_002344377.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|85838847|gb|EAQ56115.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191259|gb|EAQ95231.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360304|emb|CAL35100.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|315930170|gb|EFV09291.1| Putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 279

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|228989782|ref|ZP_04149762.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM
           12442]
 gi|228769929|gb|EEM18512.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM
           12442]
          Length = 276

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL  L                 +   ++  IKKRG L  G+      F 
Sbjct: 4   MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G  +GFDVD  +AL+  I  D SK+++  + +K R   L++  ID +      T
Sbjct: 64  LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G ++    G+T+   + +    
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNIREKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 AK----VLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G T+   +++     M    E  
Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYD 263


>gi|86151024|ref|ZP_01069240.1| bacterial extracellular solute-binding proteins, family 3
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|148926105|ref|ZP_01809791.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|85842194|gb|EAQ59440.1| bacterial extracellular solute-binding proteins, family 3
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|145845584|gb|EDK22676.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|284926212|gb|ADC28564.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 279

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|86152552|ref|ZP_01070757.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843437|gb|EAQ60647.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 279

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|228995972|ref|ZP_04155628.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17]
 gi|229003589|ref|ZP_04161405.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4]
 gi|228757631|gb|EEM06860.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4]
 gi|228763745|gb|EEM12636.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17]
          Length = 276

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL  L                 +   ++  IKKRG L  G+      F 
Sbjct: 4   MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G  +GFDVD  +AL+  I  D SK+++  + +K R   L++  ID +      T
Sbjct: 64  LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G ++    G+T+   +    + 
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNI----RK 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 178 KSPEAKVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G T+   +++     M    E  
Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYD 263


>gi|224824035|ref|ZP_03697143.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224603454|gb|EEG09629.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 301

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 6/255 (2%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              + L +I+      +  +  L  IK+ G +  G     + F+ + ++    G+  +  
Sbjct: 8   MSAAALAVIVAHPAFAAGESGTLKKIKESGTIVLGYRDSSIPFSYLGSDQKPIGYSWEIA 67

Query: 65  RALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            A+   +  +      +++   + ++ R   +Q+  +D+   +T     R     + F  
Sbjct: 68  NAVVERVKKELNMPNLEVKTNLVTSQTRIPLVQNGTVDLECGSTTNNPER--QQQIDFSV 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  K  GI     L G ++ V AG+T+E  L        M  + I  + + 
Sbjct: 126 GYFSASTRLLTRKTSGIKEFPDLKGKNVVVTAGSTSERLLRAMNAEKQMSMNVISAKDIG 185

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E      + R  AY  D   L      +  P E V+     S       + +GD E+  +
Sbjct: 186 ESFLMLESGRSAAYMVDDVLLAGEIAKSKNPDEWVVTGKPQSFENYGCMMRKGDPEFKKV 245

Query: 241 VSWTHYAMVTAEELG 255
           V  T   +  + E+ 
Sbjct: 246 VDETIKGLFKSGEIN 260


>gi|261404399|ref|YP_003240640.1| family 3 extracellular solute-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|329929709|ref|ZP_08283395.1| putative major cell-binding factor [Paenibacillus sp. HGF5]
 gi|261280862|gb|ACX62833.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           Y412MC10]
 gi|328935926|gb|EGG32385.1| putative major cell-binding factor [Paenibacillus sp. HGF5]
          Length = 269

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 110/266 (41%), Gaps = 20/266 (7%)

Query: 1   MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M + F          ++++ ++I      S +   L  IKKRG L  G+      F    
Sbjct: 1   MKRRFTGTFRWSAALLALVIMLIASGCGGSGSTDTLEAIKKRGKLVAGVKYDTKLFGLQD 60

Query: 52  A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+ +GFD+D  +AL+  I  D +K++   + +K R   L++  IDI+      T  R
Sbjct: 61  PATGNVEGFDIDIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNM 169
           +    + F  + +  GQ  ++ K   I+ +  L+  + +    G+T+   + +       
Sbjct: 121 KE--QVDFSDVYFEAGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + FE  ++   A +A + DA T D S L  ++  +       ++    +  P   A
Sbjct: 175 DAVILEFENYQDAFTALKAGQGDALTTDNSILLGMQQQDP---SFELVGGNFTDEPYGMA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           I +G+ E+   V+     +  + E  
Sbjct: 232 IKKGNPEFVKTVNELLKELKDSGEYD 257


>gi|332179316|gb|AEE15005.1| ABC-type transporter, periplasmic subunit family 3
           [Thermodesulfobium narugense DSM 14796]
          Length = 270

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 20/258 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFA 48
           M   K  F+  + L+       S  A            +  IK RG L  G+   +  F 
Sbjct: 1   MKNLKFLFLGFIVLLGFVIAGCSQQAQKPQESSAVPPDIKAIKDRGVLNVGVKYDVPKFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G  +GF++D    ++  I  +P K+  + +  K R   L + ++D++      T
Sbjct: 61  YKDPKTGKVEGFEIDIAHEMAKKILGNPDKVNLIAVTPKTRGPLLDNGEVDMVIATFTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             RE      F    + DG   ++ K  GI S + L+G ++ V    TT+  +    KA 
Sbjct: 121 PEREK--SFNFSIPYFTDGVALLVKKDSGIKSFTDLNGKTVGVAQSATTKGAIEAEAKAK 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            +K + + F    EI AA  + R  A++ D + LY             ILPD  +     
Sbjct: 179 GIKVNVLEFASYPEIKAALESGRVQAFSTDGAILYGYL-----DDSTTILPDRFAPQNYG 233

Query: 228 PAIIQGDTEWYNIVSWTH 245
            A+ +G+     +V+ T 
Sbjct: 234 IAMKKGNDGLLKLVNSTL 251


>gi|57237809|ref|YP_179057.1| surface antigen, CjaA [Campylobacter jejuni RM1221]
 gi|205356696|ref|ZP_03223457.1| putative amino-acid transporter periplasmic solute binding protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|57166613|gb|AAW35392.1| surface antigen, CjaA [Campylobacter jejuni RM1221]
 gi|205345434|gb|EDZ32076.1| putative amino-acid transporter periplasmic solute binding protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|315058426|gb|ADT72755.1| Putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 279

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|153951094|ref|YP_001397935.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938540|gb|ABS43281.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 279

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTETPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPDIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|52144760|ref|YP_082068.1| amino acid ABC transporter, periplasmic solute-binding protein
           [Bacillus cereus E33L]
 gi|51978229|gb|AAU19779.1| amino acid ABC transporter, periplasmic solute-binding protein
           [Bacillus cereus E33L]
          Length = 286

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 19/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     I+ L+ +   +  +N           +  +  IK+RG L   + T    F  
Sbjct: 1   MKKLLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   GF++D  +  +  +  D SK++++P+ A  R   LQS ++D +  N   T  
Sbjct: 61  VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F           ++     I SV  L G  + V  GTT ++ L    K    
Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I F++  E   A +  R DAY  D   L +    N  P  H++   +     +A A
Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+ E ++ V+   
Sbjct: 233 VKKGNKEIHDWVNKEL 248


>gi|121612178|ref|YP_001000662.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005588|ref|ZP_02271346.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|71532927|emb|CAJ20048.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249126|gb|EAQ72087.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 279

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      +         + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYFTQDYP----NIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|56478019|ref|YP_159608.1| putative ABC transporter, glutamate receptor [Aromatoleum
           aromaticum EbN1]
 gi|56314062|emb|CAI08707.1| putative ABC transporter, glutamate receptor [Aromatoleum
           aromaticum EbN1]
          Length = 298

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 8/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M+K   V  LCL      + +   ++  L  IK  G +  G     V F+ + AN    G
Sbjct: 1   MHKSLTVIALCLSAAGMVAPAHAQSSGTLQKIKDTGTITVGHRESSVPFSYLDANQKPVG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +D C  +  A+  +      +++Y P+ ++ R   +Q+  ID+   +T  ++ R+  +
Sbjct: 61  YAMDLCAKVVDAVKTELKMPNLQVKYQPVTSQNRIPLMQNGTIDLECGSTTNSVARQQQV 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G  F    +       + K  GI  +  L G  +    GTT++  +    K   +    I
Sbjct: 121 G--FSVAYFITSVRMGVRKDSGIDDIGDLDGKPVVTTTGTTSDELIKQNEKGRTINVKNI 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D   L  L   +  PS   I+   +   P    + + D
Sbjct: 179 YGKDHADSFLMVDSGRAAAFVMDDILLAGLIANSKNPSAFEIVGPSLRDEPYGVMVRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  IV  T   ++ + E  
Sbjct: 239 APFKAIVDKTLVGLMKSGEAE 259


>gi|1930092|gb|AAB51532.1| outer membrane protein [Campylobacter jejuni]
          Length = 279

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      +         + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLIDKTLLLNKGTTADAYFTQDYP----NIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|324324589|gb|ADY19849.1| amino acid ABC transporter, periplasmic solute-binding protein
           [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 286

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 19/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     ++ L+ +   +  +N           +  +  IK+RG L   + T    F  
Sbjct: 1   MKKLLTFIMIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   GF++D  +  +  +  D SK++++P+ A  R   LQS ++D +  N   T  
Sbjct: 61  VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F           ++     I SV  L G  + V  GTT ++ L    K    
Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I F++  E   A +  R DAY  D   L +    N  P  H++   +     +A A
Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+ E ++ V+   
Sbjct: 233 VKKGNKEVHDWVNKEL 248


>gi|322421250|ref|YP_004200473.1| family 3 extracellular solute-binding protein [Geobacter sp. M18]
 gi|320127637|gb|ADW15197.1| extracellular solute-binding protein family 3 [Geobacter sp. M18]
          Length = 271

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 93/256 (36%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M K   +     ++      +     L D+KK+G L  G+   L  F  V     +  G+
Sbjct: 1   MKKLMTLFAAMALVGIMAHAALAGDTLADVKKKGVLVAGVKDSLPPFGYVDEKSREIVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+DF + ++  +      ++  P+ +  R   L    IDI++        R     + F 
Sbjct: 61  DIDFVKYIAKKLGVK---VELKPVTSASRMPQLMEGNIDIIAATMTKNPERAK--QIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + S+  L G  I    G+T+E  +A            + F+  
Sbjct: 116 HTYFLTGQKFITKKG-AVKSLKDLEGKKIGTAKGSTSEQNVAKAIPTA----TVLSFDDY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  +  A T D S L  +       ++  I    IS+ P    + + D  +  
Sbjct: 171 PQAFLALQQGKVAAVTTDESILAGILGKAPNKNKFEIPNLQISEEPYGLGMRKDDKNFVA 230

Query: 240 IVSWTHYAMVTAEELG 255
            V+ T   M    E  
Sbjct: 231 FVNKTLLEMEKNGEAK 246


>gi|319792374|ref|YP_004154014.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315594837|gb|ADU35903.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 296

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 97/259 (37%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++ +   +LF  + +  A  L  I + G +        V F+ +       GF 
Sbjct: 1   MKLSVLMASMAAAVLFTATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFS 60

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           V+   A+  A+         ++  + + ++ R   + +  +D+   +T     R   +  
Sbjct: 61  VELSNAVVEAVKKKLNKPNLQVSLMAVTSQNRIPLITNGTVDLECGSTTNNTARGKDVA- 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   +  K   I   + L+  ++    GTT  L +  Y    N+    ++ 
Sbjct: 120 -FAVNHFYTGTRLLTKKSSKIKDYADLAKKTVASTTGTTNALVMRKYNTEKNLGMDIVLG 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D   L+ L   +  P+++ ++ + +   P A  + + D  
Sbjct: 179 KDHADAFLLVESDRAVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   M+ + E  
Sbjct: 239 FKKLVDDTFIGMMKSGEFE 257


>gi|229541938|ref|ZP_04430998.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
 gi|229326358|gb|EEN92033.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
          Length = 271

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 22/267 (8%)

Query: 2   YKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
            K     ++ ++     +            S +   +  I+ RG L  G+      F   
Sbjct: 5   KKWLAAGLVFILAAALVAGCGKSKSTGGSGSASDDPIKKIEDRGKLVVGVKYDTYLFGYK 64

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G+ +GFDVD  +A+S  IF D  K++   + +K R   LQ+  +D++         
Sbjct: 65  DPKTGNVEGFDVDIAKAISKKIFGDKVKVELKEVTSKTRIPMLQNGDVDMVVATMTI--S 122

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHN 168
            +    + F  + +  GQ  ++ K   I SV  L  G  +    G T+   +    +   
Sbjct: 123 PDRKKVVDFSDVYFDAGQSLLVKKGSKIKSVKDLTKGTKVLTVKGATSGDNV----RKAA 178

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + +E  +E   A ++ + DA T D S LY +   +     + ++    +K P   
Sbjct: 179 PDTTVLEYENYQEAFTALKSGKGDALTTDNSILYGMAAQDSN---YQVVGGTFTKEPYGI 235

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
           A+ +G+T+    V+     +  + E  
Sbjct: 236 AMKKGNTKLVKAVNKALKELKDSGEYD 262


>gi|222823699|ref|YP_002575273.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein
           [Campylobacter lari RM2100]
 gi|222538921|gb|ACM64022.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein
           [Campylobacter lari RM2100]
          Length = 275

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 9/246 (3%)

Query: 1   MYKDFFVSIL-CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F +S L  L     ++  +N + +  IK++G ++ G+      F  + A G  +G+
Sbjct: 1   MKKIFLLSFLMALFFGACSNSGSNENSIEKIKQQGVIRIGVFGDKPPFGYLDAQGKNQGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV F + ++  +  D SKIQ++ + A  R   LQS ++D++  N   T  RE+   + F 
Sbjct: 61  DVYFAKRIAKELLGDESKIQFVLVEAANRVEFLQSNKVDLILANFTKTPEREVV--VDFA 118

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++  L   ++ +  GTT +      F  +  +   I F++ 
Sbjct: 119 LPYMKVALGVVAPKNSDIKTIDDLKSKTLILNKGTTADAY----FTKNMPEIKTIKFDQN 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E  AA    R DA + D + L+A     + P+  V++ ++ +   +APA+ +GD     
Sbjct: 175 TETFAALIGKRGDALSHDNALLFAWA--KENPNFEVVIKELGNHDVIAPAVKKGDEAMLK 232

Query: 240 IVSWTH 245
            ++   
Sbjct: 233 FINNLI 238


>gi|283954532|ref|ZP_06372051.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793936|gb|EFC32686.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 279

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L +IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACEGNSDSKTLNSLDEIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+DV   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDVVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L    + +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKILLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWI--KDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  N+  KD    DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYNETLKDHFGDDVK 268


>gi|330429988|gb|AEC21322.1| amino-acid ABC transporter binding protein precursor [Pusillimonas
           sp. T7-7]
          Length = 299

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 7/253 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L ++       +   L  IK  G +  G     + F+ +       G+ 
Sbjct: 1   MKKTTITLFTALAVVATAPVYADG-RLEKIKSSGEIALGHRDSSIPFSYLDDKQQPIGYS 59

Query: 61  VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +D C+    A+   +  D   ++ +P+ +  R   L +  +D+   ++  T  R+    +
Sbjct: 60  MDICKNIVEAVKEKLGMDKLNVKMVPVTSSTRIPLLANGTVDLNCGSSTNTKERQA--QV 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P T+     F+  K   I+S+  L G ++   AGT+             +  + I  
Sbjct: 118 TFAPTTFVTATRFVAKKSSNINSLEDLKGKTVISTAGTSNIRWATGANDQQKLGMNIIPA 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E        R  A+  D   L  L  T+  PSE +I  D  +  P A    + D E
Sbjct: 178 KDHAEALLTVNNGRAAAFFMDDILLAGLVATSRDPSEWMISKDAYTVEPYAIMEPKDDPE 237

Query: 237 WYNIVSWTHYAMV 249
           +  +V  T   M+
Sbjct: 238 FKKVVDDTIKGMM 250


>gi|42779689|ref|NP_976936.1| glutamine ABC transporter, glutamine-binding protein [Bacillus
           cereus ATCC 10987]
 gi|42735606|gb|AAS39544.1| glutamine ABC transporter, glutamine-binding protein [Bacillus
           cereus ATCC 10987]
          Length = 286

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 19/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     I+ L+ +   +  +N           +  + +IK+RG L   + T    F  
Sbjct: 1   MKKFLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEEIKERGELVVAVFTDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   GF++D  +  +  +  D SK++++P+ A  R   LQS ++D +  N   T  
Sbjct: 61  VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F           ++     I SV  L G  + V  GTT ++ L    K    
Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I F++  E   A +  R D+Y  D   L +    N  P  H++   +     +A A
Sbjct: 175 NVELIKFDKNTEALQALKDGRADSYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+ E ++ V+   
Sbjct: 233 VKKGNKEVHDWVNKEL 248


>gi|300856477|ref|YP_003781461.1| putative amino acid ABC transporter periplasmic solute-binding
           protein [Clostridium ljungdahlii DSM 13528]
 gi|300436592|gb|ADK16359.1| predicted ABC-type aminoacid transporter, periplasmic
           solute-binding component [Clostridium ljungdahlii DSM
           13528]
          Length = 268

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 13/254 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K       ++ L+ +  T        +     DIK +G    G++            G
Sbjct: 1   MKKKLGILTLVIFLLGIILTGCGQGQKSSDKSWDDIKSKGQFVVGLDDSFPPMGFRDEKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D  +A +  +      + + P+      L+L +K ID++      T  R+  +
Sbjct: 61  QIVGFDIDMAKAAAQKMGVK---VVFKPVEWDGIILSLNNKDIDVIWNGLTITDKRKKQI 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F  +   + Q  ++     I +   LSG ++ +Q G+++E  L           +  
Sbjct: 118 A--FSKVYLQNKQIIVVRNDSNIKNKKDLSGKTVGLQMGSSSETALNSDAATAKSLKNIR 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E        R DA   D   +        +P  + IL D   K      I + D
Sbjct: 176 KYSNNTEALLDLNQGRIDAVVVDE--VVGRYYLQKKPGLYKILEDNFGKEDYGVGIRKSD 233

Query: 235 TEWYNIVSWTHYAM 248
             +   +     +M
Sbjct: 234 ESFKEKLDEALDSM 247


>gi|294637494|ref|ZP_06715780.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Edwardsiella tarda
           ATCC 23685]
 gi|291089326|gb|EFE21887.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Edwardsiella tarda
           ATCC 23685]
          Length = 300

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 10/253 (3%)

Query: 1   MYKDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M+K      L  + L   +     + +++ L  IK+ G +  G     V F+        
Sbjct: 1   MHKSVLTMALLALSLPLYAVADNGAADSATLAKIKQNGVIVVGHRESSVPFSYYDNKQQV 60

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+  D+  A+ +A+         +++ LP+ ++ R   LQ+   D    +T     R  
Sbjct: 61  VGYSQDYSNAIVAAVKKQLGLPNLQVKLLPITSQNRIPLLQNGTYDFECGSTTHNAER-- 118

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              +AF    +  G   +  K  G+     L+G  + V +GTT+E+ L    +   MK  
Sbjct: 119 QQQVAFSNTLFIVGTRLLTAKDSGVHDFRDLAGKPVVVTSGTTSEILLNRMNEKEGMKMR 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   +      + R  A+  D + L   +    +P   VI+    S       + +
Sbjct: 179 IISAKDHGDAFRTLESGRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRK 238

Query: 233 GDTEWYNIVSWTH 245
            D  +  +V  T 
Sbjct: 239 DDPAFKKLVDDTI 251


>gi|152974368|ref|YP_001373885.1| extracellular solute-binding protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023120|gb|ABS20890.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus
           NVH 391-98]
          Length = 275

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 22/268 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K F  +  +CL  L               ST+  ++  IKKRG L  G+      F  
Sbjct: 4   MKKWFTLIVFVCLFTLIVAGCGNKQEEAKETSTSGGVVEQIKKRGKLVVGVKNDTNLFGL 63

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T 
Sbjct: 64  KNPSTGQVEGFDVDMAKALAKRILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTITE 123

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAH 167
            R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +       
Sbjct: 124 ERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTQNVRQKAPEA 181

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + FE   E   A +A + D  T D + LY +   +     + ++  I +  P  
Sbjct: 182 ----TVLEFENYSEAFTALKAGQGDVLTTDNAILYGMAKQDAN---YEVVGKIFTNEPYG 234

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A+ +G T+    ++     +    E  
Sbjct: 235 IAVQKGATDLTKEINDLLKEIKENGEYD 262


>gi|317153800|ref|YP_004121848.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944051|gb|ADU63102.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 268

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +   V  L L  +F  + + NA  + D+K RG L CG+   +  F  V  +     G 
Sbjct: 1   MKRLIVVLALVLSFVFGVA-AANAGKIEDVKARGVLVCGVKDSVNLFGFVDPDTKELVGL 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D C+ ++  +        +  + +  R   L    +DIL+        R+    + F 
Sbjct: 60  DIDVCKYIADKLGVKTE---FKVVTSSNRIPMLVQGSVDILAATMTHKFSRDE--QIDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + DGQ  ++ K  GI S + L+   +    G+T+E  + +   A       I ++  
Sbjct: 115 ITYFMDGQKLLVEKGAGIKSTADLANKKVGTVKGSTSEKNIKNAQPA----SQVISYDEY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  +  A T D   L  LK  +D P +  I+ +  +  P    + + D+++ +
Sbjct: 171 PQAFMALKQGKVVAVTTDSGILAGLKAGDDNPDKWEIVGEFFASEPYGLGVPENDSKFRD 230

Query: 240 IVSWTHYAM 248
            V+     M
Sbjct: 231 FVNLCLNEM 239


>gi|224826757|ref|ZP_03699857.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224600977|gb|EEG07160.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 301

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    + +  ++      +     L  IK  G +  G     + F+ +  N    G+ +D
Sbjct: 6   RLICTATVGALLAAPAMSAELTGTLKKIKDSGTIVIGHRDASIPFSYLDNNQQPIGYSMD 65

Query: 63  FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
               +  A+  D      K+QY  + ++ R   +Q+  +DI   +T   L R+    + F
Sbjct: 66  IAHKVVEAVKKDLKMPGLKVQYNLVTSQTRIPLVQNGTVDIECGSTTNNLERQK--QVDF 123

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +  G   +  K  GI     L G ++   AGTT+E  +        M  + I  + 
Sbjct: 124 SVGIFEIGTRLLTKKTSGIKDFPDLKGKNVVTTAGTTSERLIKAMNAEKQMGMNIISAKD 183

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  A+  D   LY   +    P+E V+     S       + +GD  + 
Sbjct: 184 HGESFLMAESGRAVAFMMDDVLLYGEMVKARNPAEWVVTGKPQSFEIYGCMMRKGDPAFK 243

Query: 239 NIVSWTHYAMVTAEELG 255
            +V     A   + E+ 
Sbjct: 244 KVVDDAIKATYKSGEIN 260


>gi|154249737|ref|YP_001410562.1| extracellular solute-binding protein [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153673|gb|ABS60905.1| extracellular solute-binding protein family 3 [Fervidobacterium
           nodosum Rt17-B1]
          Length = 250

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 17/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F +++  ++L   + ++ A  L  IK+RG L  G       F  V       GFD
Sbjct: 1   MKK--FFTMVIAVLLVVLTVTSFAQTLTQIKQRGKLIVGTEPTFPPFEFVDEKNQVVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +      ++ + L       ALQ  +ID+       T  R     + F  
Sbjct: 59  IDIAMELAKRLGVK---LEIVSLPFDSLIPALQQGKIDLAIAGMTITKERAKV--VDFSK 113

Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +   Q  ++ K        +  L G  + VQ GTT +L ++D         + + F++
Sbjct: 114 PYFEANQAIVVRKDSKFEPKKLEDLVGQKVAVQLGTTGDLVVSDI-----TGINVVRFQK 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D +   A      +     I   + +      A+ +G+ E  
Sbjct: 169 FTDAFLELQNGRVDAVVLDEAPAKAYVKKFSK---FSISSIVDTGETYGIAVKKGNKELL 225

Query: 239 NIVSWTHYAMVTAEELG 255
           N V+ T   M  + +  
Sbjct: 226 NFVNQTLDIMKGSGQYN 242


>gi|229101400|ref|ZP_04232144.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28]
 gi|228682105|gb|EEL36238.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28]
          Length = 276

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDDVKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             AI +G  +    ++     M T+ E  
Sbjct: 235 GIAIQKGADDLTKEINNLLKDMKTSGEYD 263


>gi|321312269|ref|YP_004204556.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus
           subtilis BSn5]
 gi|320018543|gb|ADV93529.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus
           subtilis BSn5]
          Length = 273

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 101/260 (38%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48
           M K F ++++ L  +    +  +  S            L  IK    +  G+ T    F 
Sbjct: 1   MKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G+ +GFD+D  + ++  I  D  K ++  + +K R   LQ+  ID +      T
Sbjct: 61  LKNPSSGEIEGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  L  G+ +    G+T+   + +    
Sbjct: 121 DERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A ++ + DA T D + LY +   N     + +     +  P 
Sbjct: 179 A----SVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHY 246
             A+ +G +     ++ +  
Sbjct: 232 GIAVKKGQSALAKEINASLK 251


>gi|315644844|ref|ZP_07897973.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
 gi|315279786|gb|EFU43087.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
          Length = 269

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 109/266 (40%), Gaps = 20/266 (7%)

Query: 1   MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M   F          +S++ ++I      S N   L  IKKRG L  G+      F    
Sbjct: 1   MKNRFTRKFRWSAAILSLIMMLIASGCGGSGNTDTLDAIKKRGKLVAGVKYDTKLFGLQD 60

Query: 52  A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+ +GFD+D  +AL+  I  D +K++   + +K R   L++  IDI+      T  R
Sbjct: 61  PATGNVEGFDIDIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNM 169
           +    + F  + +  GQ  ++ K   I+ +  L+  + +    G+T+   + +       
Sbjct: 121 KE--QVDFSDVYFEAGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + FE  ++   A +A + DA T D S L  ++  +       ++    +  P   A
Sbjct: 175 DAVILEFENYQDAFTALKAGQGDALTTDNSILLGMQQQDP---SFELVGGNFTDEPYGMA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           I +G+ E+   V+     M  + +  
Sbjct: 232 IKKGNPEFVKTVNELLKEMKDSGDYD 257


>gi|229188845|ref|ZP_04315879.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876]
 gi|228594658|gb|EEK52443.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876]
          Length = 276

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEKIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|152985853|ref|YP_001351140.1| putative ABC transporter binding protein subunit [Pseudomonas
           aeruginosa PA7]
 gi|150961011|gb|ABR83036.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PA7]
          Length = 299

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 9/260 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57
           M      ++   + L   +      +  L  +   G +  G     V F+ +   +G   
Sbjct: 1   MKTLVSSTLAFSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGRPM 60

Query: 58  GFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD        L + +     +++Y  + ++ R   +Q+  +D+   +T  T  R+  
Sbjct: 61  GYSVDLAGKVVERLKATLGKPELRVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQ 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +   F     +     +  K  GI+    L G ++   AGTT E  L +Y   H +  + 
Sbjct: 121 VA--FSYGFIYVKGQLLTRKDSGIAHFDDLKGRNVVTTAGTTNERYLKNYNAEHKLGMNV 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +   E     ++ R  A+  D + LY  +    +P + V++ +  S+   +  + + 
Sbjct: 179 VSAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKD 238

Query: 234 DTEWYNIVSWTHYAMVTAEE 253
           D ++  +V+ T   +  + E
Sbjct: 239 DPQFLALVNETLAGLYRSGE 258


>gi|218895694|ref|YP_002444105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|228899325|ref|ZP_04063588.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL
           4222]
 gi|228963737|ref|ZP_04124879.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|218544001|gb|ACK96395.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|228795973|gb|EEM43439.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228860356|gb|EEN04753.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL
           4222]
          Length = 276

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINNLLKDMKASGEYD 263


>gi|163868657|ref|YP_001609866.1| amino-acid ABC transporter binding protein [Bartonella tribocorum
           CIP 105476]
 gi|161018313|emb|CAK01871.1| amino-acid ABC transporter binding protein [Bartonella tribocorum
           CIP 105476]
          Length = 301

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 6/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + I    I   +        L  IK+ G +  G+     G A    N  + GF 
Sbjct: 1   MKKSLLMFIAAAAIGLTSGAHAENDTLEKIKQTGEITLGVRESS-GLAYALGNNKYVGFH 59

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    +   I        KI YLP+ ++ R   L++K  D    +T   + R       
Sbjct: 60  TEMAEHIIDDISKKIGKSIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIARSKEAA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +     + K   I S+  L+G  +    GTT+   +    +A N+ +  +  +
Sbjct: 118 FAYTTYVEEVRIAVKKNSNIKSLDDLNGKIVATTTGTTSVQLIRKNKRAKNIHFKVVKGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R DA+  D S L      +  PS++VIL  ++S  P+A  +   D  +
Sbjct: 178 DHGDSFLLLESGRADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLHDKNF 237

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++ +    +  E L 
Sbjct: 238 EQAINDSILHQIKDESLE 255


>gi|116750584|ref|YP_847271.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699648|gb|ABK18836.1| extracellular solute-binding protein, family 3 [Syntrophobacter
           fumaroxidans MPOB]
          Length = 295

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +  F +    ++L +T+ +       S++  I++ G +  G   G V F  +   G W
Sbjct: 1   MMRKLFGASAAALLLMWTANTACPAHAESVMDKIERTGKVNMGHREGAVPFGYMDEKGQW 60

Query: 57  KGFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            GFD+D    L+ A+   F    +    P+N K R   + +  +D+   +T  TL RE  
Sbjct: 61  VGFDMDLGAELAKALETKFGKKIEYIKTPMNPKNRIPLVANGTVDVGIGSTTITLEREE- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-ELTLADYFKAH--NMK 170
             + F    +  G   ++ K   I    QL+G  + V +G+T     L     A   +  
Sbjct: 120 -AVDFSLPYFLTGTKLLVPKGSPIRDYRQLAGKKVGVGSGSTANIKGLQKAIDAKTIDPP 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              ++FE   +     +  + DAY  D + L  ++    +P +  ++   ++  P    +
Sbjct: 179 CEMVLFEDHAKGFLGLQQGKIDAYFTDEAMLAGMRAKAQKPDDWEVVAPFLTYEPYGFIL 238

Query: 231 IQGDTEWYNIVSWTH 245
            + D++W + V+ T 
Sbjct: 239 PRDDSKWRDFVNATL 253


>gi|57506052|ref|ZP_00371975.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Campylobacter upsaliensis RM3195]
 gi|57015660|gb|EAL52451.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Campylobacter upsaliensis RM3195]
          Length = 277

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 14/277 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K         + +F T+  ++ S    +  IK  G +K G+      F  V   G  +
Sbjct: 1   MKKILLSIFTAFVAVFLTACGSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGTNQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+ F + ++  +  D +K++++ + A  R   L+S ++DI+  N   T  R     + 
Sbjct: 61  GYDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--QVD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F         G  + K   I SV  L   ++ +  GTT +      F  ++     + F+
Sbjct: 119 FALPYMKVALGVAVPKDSEIKSVEDLKDKTLILNKGTTADAY----FTKNHADIKTLKFD 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E  AA    R DA   D + L+A     +RP   V++ ++ ++  +APA+ +GD E 
Sbjct: 175 QNTETFAALMDKRGDALAHDNTLLFAW--VKERPDYKVVIKELGNQDVIAPAVKKGDKEL 232

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              +       + AE+     K  ++  K     D++
Sbjct: 233 KEFIDNLII-SLAAEQF--FHKAYDESLKAHFGADIK 266


>gi|145589173|ref|YP_001155770.1| extracellular solute-binding protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047579|gb|ABP34206.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 304

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 9/253 (3%)

Query: 1   MY-KDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M  K+   + +        +   +  +  L  IK  G +  G+    +  +    +  + 
Sbjct: 1   MKYKNLISASVFAASFLVGAIDANAASQTLDKIKSSGAVTMGVRESSIPMSYTTGDSRFD 60

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ V+ CR +       +     +I Y P+ ++ R   +Q+  +DI    T   + R   
Sbjct: 61  GYHVEICRMILGDIKDKLGMSTLRINYQPVTSQNRVPLVQNGTVDIECGTTTNNVNRAKD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y +     +    GI+S+SQL+G  +    GTT+   L  + KA+ + +  
Sbjct: 121 VG--FAYTLYVEEVRIAVKANSGITSISQLAGKKVATTTGTTSVQLLRKHEKANGVNFEE 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +   +      + R DA+  D S L      +  P ++ I+ +++S  P+A  + + 
Sbjct: 179 VYGKDHADSFLLLESGRADAFVMDGSILAGNIANSKNPKDYKIVGEVLSTEPIAIMVRKD 238

Query: 234 DTEWYNIVSWTHY 246
           D E+   V     
Sbjct: 239 DPEFKAAVDAAIT 251


>gi|228957061|ref|ZP_04118835.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228802621|gb|EEM49464.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 276

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|229068325|ref|ZP_04201628.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185]
 gi|228714786|gb|EEL66658.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185]
          Length = 273

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 1   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 61  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 232 GIAVQKGADDLTKEINTLIKDMKASGEYD 260


>gi|229177165|ref|ZP_04304554.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W]
 gi|228606346|gb|EEK63778.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W]
          Length = 276

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEVKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|206967952|ref|ZP_03228908.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
 gi|228906387|ref|ZP_04070271.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL
           200]
 gi|228951131|ref|ZP_04113247.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229077953|ref|ZP_04210562.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2]
 gi|229108249|ref|ZP_04237871.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15]
 gi|229143367|ref|ZP_04271798.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24]
 gi|206736872|gb|EDZ54019.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
 gi|228640174|gb|EEK96573.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24]
 gi|228675265|gb|EEL30487.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15]
 gi|228705291|gb|EEL57668.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2]
 gi|228808541|gb|EEM55044.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228853299|gb|EEM98072.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL
           200]
          Length = 276

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|291485150|dbj|BAI86225.1| glutamine ABC transporter, glutamine-binding protein [Bacillus
           subtilis subsp. natto BEST195]
          Length = 273

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 102/260 (39%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48
           M K F ++++ L  +    + S+  S            L  IK    +  G+ T    F 
Sbjct: 1   MKKIFSLALISLFAVILLAACSSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G+ +GFD+D  + ++  I  D  K ++  + +K R   LQ+  ID +      T
Sbjct: 61  LKNPSSGEIEGFDIDIAKQIAKDILVDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  L  G+ +    G+T+   + +    
Sbjct: 121 DERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A ++ + DA T D + LY +   N     + +     +  P 
Sbjct: 179 A----SVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHY 246
             A+ +G +     ++ +  
Sbjct: 232 GIAVKKGQSALAKEINASLK 251


>gi|219670584|ref|YP_002461019.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
 gi|219540844|gb|ACL22583.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
          Length = 297

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 8/224 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++A  L +IK+RG L+ G+ +    F  V ANG  +GFDV+  R  +  +  D SK++++
Sbjct: 45  SSAGSLEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFV 104

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + A  R   L+S ++DI+  N   T  R     + F         G +      I+S+ 
Sbjct: 105 LVEAANRVPYLESNKVDIIMANFTVTEER--KQKVDFANPYMKVALGIVSPNGALITSID 162

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL G  + V  GTT      DY   ++     + +++  E   A +  R  A   D + +
Sbjct: 163 QLQGQKVIVNKGTTA----QDYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEV 218

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A       P   V +P + S   +APA+ +GDTE  N ++   
Sbjct: 219 LAWA--KSNPGFTVGVPTLGSTDTIAPAVKKGDTELLNWINQEL 260


>gi|115352263|ref|YP_774102.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115282251|gb|ABI87768.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 330

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +    +  L  I++ G +  G     V F+ V A+G   GF  D
Sbjct: 37  RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 96

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 97  LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 154

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 155 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 214

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  I+    S       + + D ++ 
Sbjct: 215 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 274

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 275 ALVDGVLVQLMKSGEIN 291


>gi|15600275|ref|NP_253769.1| binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|116053228|ref|YP_793551.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|9951376|gb|AAG08467.1|AE004921_4 probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|115588449|gb|ABJ14464.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 299

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 100/259 (38%), Gaps = 10/259 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKG 58
           K    S   L +      +     +  L  +   G +  G     V F+ +   +G   G
Sbjct: 2   KTLVSSTFALSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMG 61

Query: 59  FDVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + V+    +   +         K++Y  + ++ R   +Q+  +D+   +T  T  R+  +
Sbjct: 62  YSVELAGKVVERLKSTLGKPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQV 121

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F     +     +  K  GI+    L G ++   AGTT E  L +Y   H +  + +
Sbjct: 122 A--FSYGFIYVKGQLLTRKDSGIAHFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVV 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E     ++ R  A+  D + LY  +    +P + V++ +  S+   +  + + D
Sbjct: 180 SAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEE 253
            ++  +V+ T   +  + E
Sbjct: 240 PQFLALVNETLAGLYRSGE 258


>gi|171319564|ref|ZP_02908662.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171095209|gb|EDT40203.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 306

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +    +  L  I++ G +  G     V F+ V A+G   GF  D
Sbjct: 13  RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 73  LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 131 STTFFVATTRLLTRTSSGIRDFHDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  I+    S       + + D ++ 
Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 251 ALVDGVLVQLMKSGEIN 267


>gi|326318026|ref|YP_004235698.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374862|gb|ADX47131.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 295

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    S   L        +  A  L  I   G +        V F+ +   G   GF VD
Sbjct: 2   KTTLCSAALLACGLMAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSVD 61

Query: 63  FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
              A+  A+    +K    ++   + ++ R   + +  +D+   +T     R   +   F
Sbjct: 62  ISNAVVDAVKKKLNKPDIKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQ--F 119

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               ++ G   ++ K  GI + + L+  ++    GTT    +  Y + +N+    ++ + 
Sbjct: 120 AVNYFYTGTRLLVKKSWGIRNYADLAKKTVASTTGTTNAQVIRKYNRDNNLDMDIVLGKD 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        R  A+  D   L+ LK     P+E  ++ D +   P A  + + D ++ 
Sbjct: 180 HNDSMLLVDTGRALAFAMDDILLFGLKANATNPAEWDVVGDALQVEPYACMLRKDDPQFQ 239

Query: 239 NIVSWTHYAMVTAEELG 255
            +V+     M+ + E  
Sbjct: 240 ALVNGVIGGMMKSGEFE 256


>gi|229074424|ref|ZP_04207456.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18]
 gi|228708708|gb|EEL60849.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18]
          Length = 276

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +            +  +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDDVKETNTKQSRAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M T+ E  
Sbjct: 235 GIAVQKGADDLTKEINNLLKDMKTSGEYD 263


>gi|323697540|ref|ZP_08109452.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323457472|gb|EGB13337.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 268

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +   +  L L  +F  + +     L D+K +G L CG+   +  F  V  N     GF
Sbjct: 1   MKRLVLILALVLSFVFAANAAFAGK-LEDVKAKGVLVCGVKDSVNLFGFVDPNTKELVGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+ ++  I        +  + +K R   L    +D+L+        R+    + F 
Sbjct: 60  DVDICKYIADKIGVKTE---FKVVTSKNRIPMLAQGSVDMLAATMTHKFSRDE--QIDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + DGQ  ++ K  GI+S + L+   +    G+T+E  +    KA       I ++  
Sbjct: 115 ITYFMDGQKLLVEKGSGITSTADLANKKVGTVKGSTSEKNI----KAAQPAAQVISYDEY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  +  A T D   L  LK  +D P +  I+    S  P    + Q D+E+ +
Sbjct: 171 PQAFMALKQGKVKAVTTDSGILAGLKAGDDNPEKWEIVGAFFSSEPYGLGVPQNDSEFRD 230

Query: 240 IVSWTHYAM 248
            V+     M
Sbjct: 231 FVNKCLNEM 239


>gi|168240514|ref|ZP_02665446.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194450029|ref|YP_002044700.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194408333|gb|ACF68552.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|205339899|gb|EDZ26663.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 302

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLAMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263


>gi|121393|sp|P27676|GLNH_BACST RecName: Full=Glutamine-binding protein; Short=GlnBP; Flags:
           Precursor
 gi|142989|gb|AAA22484.1| glutamine-binding protein [Geobacillus stearothermophilus]
          Length = 262

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/271 (20%), Positives = 105/271 (38%), Gaps = 36/271 (13%)

Query: 1   MYKD----FFVSILCLIILFFTSFS---------------------TNASILGDIKKRGF 35
           M +      ++++  + +L  T+ +                        + L  IKKRG 
Sbjct: 1   MKRKTVWKIWITLALIALLSITALAGCSSESSTTNKEDGAKSTETSAGTNTLEKIKKRGK 60

Query: 36  LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G+   L  F       G  +GFD+D  + L+  I  D +KI+   + +K R   L +
Sbjct: 61  LIVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNN 120

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAG 153
            +ID +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G
Sbjct: 121 GEIDAIIGTMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKG 178

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   +           + + FE   E   A +A + DA T D + L+ +   +     
Sbjct: 179 STSAQNIRKVAPE----VNVLEFENYAEAFTALKAGQGDALTTDNALLWGMAKQDPN--- 231

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           + +L +  SK P      +    +   ++ T
Sbjct: 232 YRVLDETFSKEPYGIGSAKETKNYCKSLTNT 262


>gi|1813949|emb|CAA71822.1| cjaA [Campylobacter jejuni]
          Length = 279

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K         + +F  +   N+       L  IK+ G ++ G+      F  V   G 
Sbjct: 1   MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +  D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + +   ISS+  L   ++ +  GTT +      F         + 
Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADAY----FTKEYPDIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     + P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAW--VKEHPEFKMAIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +      +    E     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLITKL---GEEQFFHKAYDETLKSHFGDDVK 268


>gi|310639894|ref|YP_003944652.1| abc transporter, periplasmic glutamine-binding protein
           [Paenibacillus polymyxa SC2]
 gi|309244844|gb|ADO54411.1| ABC transporter, periplasmic glutamine-binding protein
           [Paenibacillus polymyxa SC2]
          Length = 276

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 110/273 (40%), Gaps = 27/273 (9%)

Query: 1   MYKDF------FVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGL 44
           M K F       V++ CL++L        A+           L  IK+RG L  G+    
Sbjct: 1   MRKRFQWSTLVLVALTCLLVLAGCGGKQEAATSGNEAAASNGLEAIKQRGKLVVGVKYDT 60

Query: 45  VGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F      +G  +GFD+D  +A++  IF D +K++   + +K R   LQ+  ID +   
Sbjct: 61  KLFGLKDPASGKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLAD 162
              +  R+    + F  + +  GQ  ++ K   I+ +  L     +    G+T+   + +
Sbjct: 121 MTISDERKK--QVDFSDVYFNAGQSLLVKKGSPITGLESLTPDTKVLAVKGSTSAKNIRE 178

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                      + FE  ++   A +A +  A T D S L  ++  +     + ++    +
Sbjct: 179 KAPKA----TILEFENYQDAFNALKAGKGQALTTDNSILLGMQQQDPN---YTLVGGNFT 231

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + P   A+ +G TE    ++ T   + +  E  
Sbjct: 232 EEPYGIAVKKGQTELLQAINDTIKELKSNGEYD 264


>gi|222094394|ref|YP_002528453.1| ABC transporter , substrate-binding protein; glutamine-binding
           protein [Bacillus cereus Q1]
 gi|229194958|ref|ZP_04321739.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293]
 gi|221238451|gb|ACM11161.1| ABC transporter, substrate-binding protein; probable
           glutamine-binding protein [Bacillus cereus Q1]
 gi|228588526|gb|EEK46563.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293]
          Length = 276

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINNLIKDMKASGEYD 263


>gi|32266237|ref|NP_860269.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter hepaticus ATCC 51449]
 gi|32262287|gb|AAP77335.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter hepaticus ATCC 51449]
          Length = 275

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 15/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K        + ++  ++   N S       L +IK++G ++ G+ +    F  +   G
Sbjct: 1   MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFDV   + ++  +  D +K++++   A  R   L+S ++DI+  N   T  RE   
Sbjct: 61  QNDGFDVYIAKRIAKDLLGDENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F         G I      I S+  L G  + V  GTT +     +F  +      +
Sbjct: 120 -VDFAKPYMKVALGVISPNG-EIKSIDDLKGKKLIVNKGTTADA----FFSKNYPDIELL 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E+  E   A +  R DA   D + L A  +  +    +V +P +  +  +APAI +G+
Sbjct: 174 KYEQNTEAFLALKDKRGDALAHDNTLLLAWAM--ENEGFNVGIPTLGEEENIAPAIKKGN 231

Query: 235 TEWYNIVSWTHYAMVT 250
            E  N +     ++  
Sbjct: 232 IELKNWLDNEITSLTH 247


>gi|228919494|ref|ZP_04082858.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840137|gb|EEM85414.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 276

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F + I  CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFMLIIFSCLFVLVVAGCGSKKDEAKETNTKQGRAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|224372632|ref|YP_002607004.1| extracellular solute-binding protein, family 3 [Nautilia
           profundicola AmH]
 gi|223588682|gb|ACM92418.1| extracellular solute-binding protein, family 3 [Nautilia
           profundicola AmH]
          Length = 260

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 102/249 (40%), Gaps = 15/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  +   ++ +F T+   +A +L D++ RG LK G+      F  V + G   GFD
Sbjct: 1   MKKLF--AFFVILGMFLTT--ASADLLKDVQSRGVLKAGVKYDFPPFGYVNSKGQVVGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +   P    +  + +K R   +QS  IDI + +    + R++   + F  
Sbjct: 57  IDLIKYIAKKLGVKP---VFTQVTSKTRIPMVQSGTIDIAAASMTHKVKRDLP--IDFTI 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             YFDGQ  +  K     S    +G  + V  G T+     D FK        + F+   
Sbjct: 112 SYYFDGQSILARKDCKAKSYKDFAGKRVGVIQGATS----GDNFKRVCPGVKLVYFQEYP 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A +  + DA + D +        +    +  ++    +  P    + + ++ + + 
Sbjct: 168 QAVMALKRGKIDAVSTDYTWCATQAKNSH--GQFKVVGKPFTFEPYGMGVRENESNFRDA 225

Query: 241 VSWTHYAMV 249
           V++     V
Sbjct: 226 VNFAIQDAV 234


>gi|206978156|ref|ZP_03239038.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus H3081.97]
 gi|206743628|gb|EDZ55053.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus H3081.97]
          Length = 276

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263


>gi|228970759|ref|ZP_04131399.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228788884|gb|EEM36823.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 273

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 1   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 61  LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260


>gi|228937878|ref|ZP_04100506.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228977334|ref|ZP_04137729.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407]
 gi|228782311|gb|EEM30494.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407]
 gi|228821784|gb|EEM67784.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326938356|gb|AEA14252.1| glutamine-binding protein [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 276

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|16079797|ref|NP_390621.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221310680|ref|ZP_03592527.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221315003|ref|ZP_03596808.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319924|ref|ZP_03601218.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221324205|ref|ZP_03605499.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|81555988|sp|O34563|GLNH_BACSU RecName: Full=ABC transporter glutamine-binding protein glnH;
           Flags: Precursor
 gi|2635189|emb|CAB14685.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|28375453|emb|CAA93318.1| glutamine-binding subunit [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 273

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 101/260 (38%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48
           M K F ++++ L  +    +  +  S            L  IK    +  G+ T    F 
Sbjct: 1   MKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G+ +GFD+D  + ++  I  D  K Q+  + +K R   LQ+  ID +      T
Sbjct: 61  LKNPSSGEIEGFDIDIAKQIAKDILGDEKKAQFKEVTSKTRIPMLQNGDIDAIVATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  L  G+ +    G+T+   + +    
Sbjct: 121 EERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVENLGKGSKVLAVKGSTSSQNIREKAPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A ++ + DA T D + LY +   N     + +     +  P 
Sbjct: 179 A----SVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHY 246
             A+ +G +     ++ +  
Sbjct: 232 GIAVKKGQSALAKEINASLK 251


>gi|42779786|ref|NP_977033.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|52144672|ref|YP_082157.1| glytamine ABC transporter substrate-binding protein [Bacillus
           cereus E33L]
 gi|42735703|gb|AAS39641.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|51978141|gb|AAU19691.1| ABC transporter, substrate-binding protein; probable
           glutamine-binding protein [Bacillus cereus E33L]
          Length = 276

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263


>gi|302339794|ref|YP_003805000.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301636979|gb|ADK82406.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 266

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 103/283 (36%), Gaps = 28/283 (9%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M + F+ S++ L     +LF      ++S +  I+ +G L  G++           + + 
Sbjct: 1   MKRIFWFSLILLISSGALLFAGGDKESSSDIDAIRDKGVLVVGLDDSFPPMGFRDESNEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +  +  +      +++ P++     L+L    ID++      T  R     +
Sbjct: 61  VGFDIDLAKEAAKRLGVK---VEFKPVDWDGVILSLNKGDIDVVWNGMSITESR--MEKI 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F      + Q  ++ K   I   S L G  + +Q G+++E+ L +Y +          +
Sbjct: 116 NFSKPYLDNRQIIVVPKGSAIKEKSDLVGKVVGLQMGSSSEVALNNYAEVAASLGDVKKY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E      A R DA   D   +      + RP  + ++ D          I + D +
Sbjct: 176 SNNVEALLDLAAGRTDAVIVDE--IVGRYYISKRPGIYQVIGDDFGSETYGVGIRKSDVK 233

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLG 278
               +                    +++  D +  ++ Q++ G
Sbjct: 234 LKQELDKVL----------------DEMKADGSADEISQKWFG 260


>gi|156934833|ref|YP_001438749.1| glutamate and aspartate transporter subunit [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156533087|gb|ABU77913.1| hypothetical protein ESA_02680 [Cronobacter sakazakii ATCC BAA-894]
          Length = 316

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 92/251 (36%), Gaps = 10/251 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    ++L + +    + + +AS     L  IK  G +  G     V F+         G
Sbjct: 19  RKLTAAMLVMGLSAGLAHAEDASSGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVG 78

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+   
Sbjct: 79  YSQDYSNAIVEAVKKQLNKPDLQVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   ++ K   I     L G ++ V +GTT+E+ L        M    I
Sbjct: 139 A--FSDTIFVVGTRLLVKKGGPIKDFPDLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + L   +    +P    I+    SK      + +GD
Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRKGD 256

Query: 235 TEWYNIVSWTH 245
             +  +V  T 
Sbjct: 257 ESFKKLVDETI 267


>gi|324324679|gb|ADY19939.1| glytamine ABC transporter substrate-binding protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 276

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLIVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263


>gi|293397296|ref|ZP_06641568.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, binding protein [Serratia odorifera DSM
           4582]
 gi|291420214|gb|EFE93471.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, binding protein [Serratia odorifera DSM
           4582]
          Length = 298

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 6/257 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L  +             L  IK  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLLLIGMASSVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQRKVVGYS 62

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+   +  AI         +++ +P+ ++ R   LQ+   D    +T   + R+     
Sbjct: 63  QDYSNQIVEAIKKQLNAPDLQVKMMPITSQNRIPLLQNGTFDFECGSTTNNIERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K   +     L+G ++ V +GTT+E+ L        M    I  
Sbjct: 122 -FSDTIFVVGTRLLVKKGSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNDKDKMNMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +    +P +  I+    SK      + + D +
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWQIIGTAQSKEAYGCMLRKDDPQ 240

Query: 237 WYNIVSWTHYAMVTAEE 253
           +  +V  T     T+ E
Sbjct: 241 FKKLVDDTIAQAQTSGE 257


>gi|62179263|ref|YP_215680.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|224582500|ref|YP_002636298.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|62126896|gb|AAX64599.1| ABC superfamily (bind_prot), glutamate/aspartate transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224467027|gb|ACN44857.1| ABC transporter periplasmic binding protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|322713729|gb|EFZ05300.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 308

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 10  RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 70  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLRGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269


>gi|16764042|ref|NP_459657.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|56414206|ref|YP_151281.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363130|ref|YP_002142767.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|16419178|gb|AAL19616.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56128463|gb|AAV77969.1| ABC transporter periplasmic binding protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094607|emb|CAR60128.1| ABC transporter periplasmic binding protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|326622408|gb|EGE28753.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
          Length = 308

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 10  RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 70  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269


>gi|229159720|ref|ZP_04287729.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803]
 gi|228623745|gb|EEK80562.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803]
          Length = 276

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGAEDLTKEINSLLKDMKANGEYD 263


>gi|30018825|ref|NP_830456.1| glutamine-binding protein [Bacillus cereus ATCC 14579]
 gi|229126071|ref|ZP_04255093.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4]
 gi|29894367|gb|AAP07657.1| Glutamine-binding protein [Bacillus cereus ATCC 14579]
 gi|228657393|gb|EEL13209.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4]
          Length = 276

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSEIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKENGEYD 263


>gi|161615117|ref|YP_001589082.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167550797|ref|ZP_02344553.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|168231680|ref|ZP_02656738.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168264402|ref|ZP_02686375.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465842|ref|ZP_02699724.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168820210|ref|ZP_02832210.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194443341|ref|YP_002039908.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194469057|ref|ZP_03075041.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|197248012|ref|YP_002145641.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197262383|ref|ZP_03162457.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|198241916|ref|YP_002214653.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389609|ref|ZP_03216220.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|238911616|ref|ZP_04655453.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|20141451|sp|Q9ZF60|GLTI_SALTY RecName: Full=Glutamate/aspartate periplasmic-binding protein;
           Flags: Precursor
 gi|161364481|gb|ABX68249.1| hypothetical protein SPAB_02884 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402004|gb|ACF62226.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194455421|gb|EDX44260.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|195631794|gb|EDX50314.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197211715|gb|ACH49112.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197240638|gb|EDY23258.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197936432|gb|ACH73765.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199602054|gb|EDZ00600.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|205324274|gb|EDZ12113.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205334029|gb|EDZ20793.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205343265|gb|EDZ30029.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205347107|gb|EDZ33738.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|312911697|dbj|BAJ35671.1| glutamate/aspartate ABC transporter substrate binding protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320084938|emb|CBY94727.1| Membrane-bound lytic murein transglycosylase F Murein lyase F;
           Flags: Precursor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226244|gb|EFX51295.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322613209|gb|EFY10152.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322621277|gb|EFY18134.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623697|gb|EFY20535.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628969|gb|EFY25748.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631691|gb|EFY28445.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637573|gb|EFY34275.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641913|gb|EFY38543.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646757|gb|EFY43263.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651458|gb|EFY47838.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653091|gb|EFY49425.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658811|gb|EFY55066.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664919|gb|EFY61112.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322668921|gb|EFY65073.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670573|gb|EFY66706.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322675314|gb|EFY71390.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682215|gb|EFY78240.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684956|gb|EFY80953.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323193986|gb|EFZ79188.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197922|gb|EFZ83044.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202031|gb|EFZ87091.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323207164|gb|EFZ92117.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210929|gb|EFZ95792.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214309|gb|EFZ99060.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323219286|gb|EGA03777.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323225503|gb|EGA09733.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323231062|gb|EGA15178.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323234106|gb|EGA18195.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238199|gb|EGA22257.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242567|gb|EGA26591.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248456|gb|EGA32390.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251329|gb|EGA35201.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323259257|gb|EGA42900.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323262142|gb|EGA45704.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264846|gb|EGA48347.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272317|gb|EGA55724.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 302

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263


>gi|170702494|ref|ZP_02893375.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170132604|gb|EDT01051.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 306

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 95/261 (36%), Gaps = 6/261 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +    +  L  I++ G +  G     V F+ V A+G   GF  D
Sbjct: 13  RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 73  LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   +    I  + 
Sbjct: 131 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKLNMQIISAKD 190

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  I+    S       + + D ++ 
Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250

Query: 239 NIVSWTHYAMVTAEELGITQK 259
            +V      ++ + E+     
Sbjct: 251 ALVDGVLVQLMKSGEINAQYD 271


>gi|308067189|ref|YP_003868794.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa
           E681]
 gi|305856468|gb|ADM68256.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa
           E681]
          Length = 276

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 111/273 (40%), Gaps = 27/273 (9%)

Query: 1   MYKDF------FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGL 44
           M K F       V++ CL++L                  A  L  IK+RG L  G+    
Sbjct: 1   MRKRFQWSTLVLVALSCLLVLAGCGGKEGAATSGNEPAAAKGLEAIKQRGKLVVGVKYDT 60

Query: 45  VGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F      +G  +GFD+D  +A++  IF D +K++   + +K R   LQ+  ID +   
Sbjct: 61  KLFGLKDPASGKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLAD 162
              +  R+    + F  + +  GQ  ++ K   I+ +  L+    +    G+T+   + +
Sbjct: 121 MTISDERKK--QVDFSDVYFNAGQSLLVKKGSPITGLESLTANTKVLAVKGSTSAKNIRE 178

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                      + FE  ++   A +A + +A T D S L  ++  +     ++++    +
Sbjct: 179 KAPEA----TILEFENYQDAFNALKAGKGEALTTDNSILLGMQKQDPN---YILVGGNFT 231

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + P   A+ +G  E    ++ T   + +  E  
Sbjct: 232 EEPYGIAVKKGQPELLQAINDTLKELKSNGEYD 264


>gi|146342965|ref|YP_001208013.1| glutamate/aspartate ABC transporter substrate binding protein
           [Bradyrhizobium sp. ORS278]
 gi|146195771|emb|CAL79798.1| glutamate/aspartate ABC transporter (substrate binding protein)
           [Bradyrhizobium sp. ORS278]
          Length = 304

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 96/260 (36%), Gaps = 9/260 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +     +     L             L  IK+ G +  G+    + F+ +  N    G
Sbjct: 1   MKQLRLFGLAFAAALCAGQVQAEDLTGTLKTIKETGAITLGVRDSSIPFSYLDDNQKPVG 60

Query: 59  FDVDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           F +D C     A+   +  D  +++  P+ +  R   L +  ID+   +T     R+   
Sbjct: 61  FAIDICMGIVDAVKKELKLDKLEVKLNPVTSSTRIPLLANGTIDLECGSTTNNAERQK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +     ++  K   I+ +  L G  +   AGTT    L +   A  +  + I
Sbjct: 119 QISFTNTHFLTASRYVSKKASNITKIDDLKGKPVVSTAGTTNIKQLTEANAARGLGINII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQG 233
             +   E        R  A+  D   L +L  ++  P+ +VI  D  SK  P    + + 
Sbjct: 179 PAKDHAEAFLMVETDRAVAFVMDDILLASLVASSKDPAAYVISSDAFSKPEPYGIMLRKD 238

Query: 234 DTEWYNIVSWTHYAMVTAEE 253
           D ++  +V      + T+ E
Sbjct: 239 DPQFKKVVDAATAKIYTSGE 258


>gi|229015970|ref|ZP_04172931.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273]
 gi|228745330|gb|EEL95371.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273]
          Length = 276

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDETKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +    + 
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 178 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|229022187|ref|ZP_04178737.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272]
 gi|228739118|gb|EEL89564.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272]
          Length = 273

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 1   MKKLFTLIVFSCLFVLVVAGCGSKKDETKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 61  LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +    + 
Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 175 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260


>gi|57168852|ref|ZP_00367982.1| ABC transporter, periplasmic substrate-binding protein
           [Campylobacter coli RM2228]
 gi|57019688|gb|EAL56374.1| ABC transporter, periplasmic substrate-binding protein
           [Campylobacter coli RM2228]
          Length = 279

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K         + +F  +   N+       L  IK+ G ++ G+      F  V   G 
Sbjct: 1   MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +  D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + +   ISS+  L   ++ +  GTT +      F         + 
Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADAY----FTKEYPDIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     + P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAW--VKEHPEFKMAIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +      +    E     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLITKL---GEEQFFHKVYDETLKSHFGDDVK 268


>gi|283853865|ref|ZP_06371081.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
 gi|283570740|gb|EFC18784.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
          Length = 272

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 10/256 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K  ++S L  +++   + +  A  L DIK RG L  G+      F  V        GF
Sbjct: 1   MRKTAWISALAGLLILGLAATALAGKLDDIKSRGALVAGVKDSQPPFGYVDEKTNQVVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   AL+  +      ++  P+ +  R   L    IDI++        RE    + F 
Sbjct: 61  EIDLMEALAKRLGVK---LELKPVTSSTRIPMLGQGAIDIVAATMTHKKERE--DQVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ  ++ K  G++SV+ L G  +    G+T+E  +    K        I FE  
Sbjct: 116 ITYFMTGQKLLVKKGGGVNSVADLGGKKVGSVKGSTSEQNV----KKAQPDCTVISFETY 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +  +  A T D S L  +K ++D P    I+ + IS  P    + + D+++ +
Sbjct: 172 PEAFLALKQGKVQAMTTDESILVGIKNSDDNPDAWDIVGEYISPEPYGLGLPENDSDFRD 231

Query: 240 IVSWTHYAMVTAEELG 255
            V+     M    E  
Sbjct: 232 FVNLALMNMWETGEYQ 247


>gi|228983841|ref|ZP_04144036.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775890|gb|EEM24261.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 276

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L  T   +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|229154342|ref|ZP_04282462.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342]
 gi|228629166|gb|EEK85873.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342]
          Length = 273

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L  T   +               +  IKKRG L  G+      F 
Sbjct: 1   MKKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 61  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260


>gi|204930506|ref|ZP_03221436.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204320440|gb|EDZ05643.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
          Length = 302

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 14/262 (5%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241

Query: 234 DTEWYNIVSWTH---YAMVTAE 252
           D E+  ++  T     A   AE
Sbjct: 242 DPEFKKLMDDTIAQAQASGEAE 263


>gi|118476326|ref|YP_893477.1| ABC transporter periplasmic glutamine-binding protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|118415551|gb|ABK83970.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 276

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263


>gi|15643359|ref|NP_228403.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermotoga maritima MSB8]
 gi|4981112|gb|AAD35678.1|AE001734_5 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermotoga maritima MSB8]
          Length = 246

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   VSIL + I+ F+        + +IK RG+L  G++     F  V  NG+  GFD
Sbjct: 1   MKKLLAVSILLVSIVIFSGA------IDEIKSRGYLLVGLSADFPPFEFVDENGNIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  +   ++ + +       +L +K+ID++      T  R+  +   F  
Sbjct: 55  VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  GQ  ++ K       +   L G ++ VQ GTT ++ ++ Y          + F++
Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----DGIKVVRFDK 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D       +    +  + VI   ++S      A+ + DT+  
Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221

Query: 239 NIVSWTH 245
             ++   
Sbjct: 222 EFINSVL 228


>gi|225862618|ref|YP_002747996.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB102]
 gi|225788614|gb|ACO28831.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB102]
          Length = 276

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I ++  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKNIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I ++ P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTEEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263


>gi|47568091|ref|ZP_00238796.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9241]
 gi|218232444|ref|YP_002365436.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus B4264]
 gi|229148978|ref|ZP_04277223.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550]
 gi|47555245|gb|EAL13591.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9241]
 gi|218160401|gb|ACK60393.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus B4264]
 gi|228634518|gb|EEK91102.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550]
          Length = 276

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|229114241|ref|ZP_04243662.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3]
 gi|228669261|gb|EEL24682.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3]
          Length = 275

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 99/269 (36%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I  +  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKGIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E     +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTGLKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKASGEYD 263


>gi|168236652|ref|ZP_02661710.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194737342|ref|YP_002113776.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194712844|gb|ACF92065.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197290231|gb|EDY29587.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 302

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTTMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263


>gi|229028439|ref|ZP_04184561.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271]
 gi|228732888|gb|EEL83748.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271]
          Length = 275

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|229137440|ref|ZP_04266051.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26]
 gi|228645998|gb|EEL02221.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26]
          Length = 273

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 1   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 61  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260


>gi|229171423|ref|ZP_04299008.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3]
 gi|228612127|gb|EEK69364.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3]
          Length = 276

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEVKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|217958226|ref|YP_002336772.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH187]
 gi|217064327|gb|ACJ78577.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH187]
          Length = 276

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|229042502|ref|ZP_04190247.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676]
 gi|296501400|ref|YP_003663100.1| glutamine-binding protein [Bacillus thuringiensis BMB171]
 gi|228726855|gb|EEL78067.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676]
 gi|296322452|gb|ADH05380.1| glutamine-binding protein [Bacillus thuringiensis BMB171]
          Length = 276

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSEIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|207856130|ref|YP_002242781.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|206707933|emb|CAR32222.1| ABC transporter periplasmic binding protein (glutamate/aspartate?)
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
          Length = 308

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 10  RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDRIAKNGVIVVGHRESSVPFSYYDNQQKVV 69

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 70  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269


>gi|120610617|ref|YP_970295.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120589081|gb|ABM32521.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 295

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 98/259 (37%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + L    +   + +  A  L  I   G +        V F+ +   G   GF 
Sbjct: 1   MKTTLCSAALLACGMLAGA-AAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFS 59

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           VD   A+  A+         K++   + ++ R   + +  +D+   +T     R   +  
Sbjct: 60  VDISNAVVDAVKKKLNKPDLKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQ- 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   ++ K  G+ + + L+  ++    GTT    +  Y + +N++   I+ 
Sbjct: 119 -FAVNYFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQVIRKYNRDNNLEMDIILG 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R  A+  D   L+ LK     P+E  ++ D +   P A  + + D +
Sbjct: 178 KDHNDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQ 237

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V+     M+ + E  
Sbjct: 238 FQALVNGVIGGMMKSGEFE 256


>gi|242278992|ref|YP_002991121.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242121886|gb|ACS79582.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 271

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 101/244 (41%), Gaps = 10/244 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
           +   + +  ++ +   +    A  L ++K RG L CG+   +V F  +  +     G D+
Sbjct: 2   RRLSIIVAMVLAMALCASVAMADKLQEVKARGVLMCGVKDAVVPFGYIDEDTKKLVGLDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D C  ++  +        + P+ +  R   +    ID+ +      + R+    + F   
Sbjct: 62  DICNYIAKELGVKAE---FKPVTSATRIPMVVQGSIDLAAATMTHKIARD--DTIDFSIT 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            + DGQ  ++ K  GI+SV+ L G  +    G+T+E  +     A       + FE   +
Sbjct: 117 YFMDGQKLLVKKGAGINSVADLKGKKVGTAKGSTSEQNI----MAAQPDCKVLSFEGYPQ 172

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +  +  A T D + L  LK ++  P +  I+ + IS  P    + + ++ + + V
Sbjct: 173 AMLALKQGKVKAVTTDSTILLGLKNSDPNPEKWEIVGEFISPEPYGIGLPENESNFRDAV 232

Query: 242 SWTH 245
           +   
Sbjct: 233 NQAL 236


>gi|228913329|ref|ZP_04076962.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228925828|ref|ZP_04088912.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228833843|gb|EEM79396.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846238|gb|EEM91257.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 276

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263


>gi|229120290|ref|ZP_04249540.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201]
 gi|228663100|gb|EEL18690.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201]
          Length = 276

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKEMNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263


>gi|150018984|ref|YP_001311238.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905449|gb|ABR36282.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 270

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 20/268 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVGFA 48
           M  +  F+++   + +     S++              +  IK RG LK G+   +  + 
Sbjct: 1   MKLRKLFLAVGLGVCMMMAGCSSSTPTNTGGNTAEAKEIQAIKDRGVLKVGVKVDVPKYG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G+ +G ++D  +A++  I  D SK+++  + AK R   L + +ID+++     T
Sbjct: 61  YKNPQTGEMEGLEIDLSKAIAKKILGDESKVEFQGVTAKTRGPLLDNGEIDMVAATFTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+      F      DG G ++ K  G SS+  L G +I V    TT+  L    +  
Sbjct: 121 DERKK--SYNFSDPYIKDGVGLLVKKSLGASSLKDLDGKTIGVAQSATTKTALQKEAEKE 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            +           E+ AA  + R D +  D S L             VIL D        
Sbjct: 179 GITLKFSELGGYPELKAALDSGRIDCFAVDASILNGYV-----DDSTVILNDRYDPQEYG 233

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A  + +TE    V+     M ++ EL 
Sbjct: 234 IATKKDNTELAKEVNEVINDMKSSGELD 261


>gi|172061134|ref|YP_001808786.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171993651|gb|ACB64570.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 306

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +    +  L  I++ G +  G     V F+ V A+G   GF  D
Sbjct: 13  RSLLVAACALACGTALAAQPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + + +         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 73  LCDRVIATVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 131 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  I+    S       + + D ++ 
Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 251 ALVDGVLVQLMKSGEIN 267


>gi|161504171|ref|YP_001571283.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865518|gb|ABX22141.1| hypothetical protein SARI_02277 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 308

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 10  RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ LP+ ++ R   LQ+   D    +T   L R+  
Sbjct: 70  GYSQDYSNAIVEAVKKKLNKPDLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269


>gi|229083877|ref|ZP_04216186.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44]
 gi|228699455|gb|EEL52131.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44]
          Length = 276

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F F+   CL  L                     ++  IKKRG L  G+      F 
Sbjct: 4   MKKLFTFIVFACLFTLVVAGCGNKKEEAKETNTKQGGVVEQIKKRGKLVVGVKHDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D SK++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGKVEGFDVDIAKALAKKILGDESKLELKEVTSKTRIPMLKNGDIDTIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +     +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKDVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G T+    ++     M    E  
Sbjct: 235 GIAVQKGATDLTKEINDLLKEMKANGEYD 263


>gi|228932067|ref|ZP_04094959.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|301052294|ref|YP_003790505.1| ABC transporter substrate-binding protein [Bacillus anthracis CI]
 gi|228827650|gb|EEM73392.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|300374463|gb|ADK03367.1| ABC transporter, substrate-binding protein; probable
           glutamine-binding protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 276

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKEEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263


>gi|229089702|ref|ZP_04220963.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42]
 gi|228693601|gb|EEL47303.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42]
          Length = 273

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 1   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 61  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 232 GIAVQKGADDLTKEINSLIKDMKANGEYD 260


>gi|30260794|ref|NP_843171.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Ames]
 gi|47525919|ref|YP_017268.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49183632|ref|YP_026884.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis str. Sterne]
 gi|49476850|ref|YP_034898.1| glutamine ABC transporter substrate-binding protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65318066|ref|ZP_00391025.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bacillus anthracis str.
           A2012]
 gi|165872945|ref|ZP_02217568.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0488]
 gi|167635159|ref|ZP_02393475.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0442]
 gi|167640878|ref|ZP_02399136.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0193]
 gi|170689027|ref|ZP_02880227.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0465]
 gi|170708475|ref|ZP_02898917.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0389]
 gi|177652832|ref|ZP_02935205.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0174]
 gi|190568524|ref|ZP_03021430.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035755|ref|ZP_03103158.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus W]
 gi|196041840|ref|ZP_03109129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus NVH0597-99]
 gi|196047174|ref|ZP_03114391.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB108]
 gi|218901836|ref|YP_002449670.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|227816490|ref|YP_002816499.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CDC 684]
 gi|228944392|ref|ZP_04106765.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229182974|ref|ZP_04310206.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1]
 gi|229602354|ref|YP_002865238.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0248]
 gi|254684283|ref|ZP_05148143.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722087|ref|ZP_05183876.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A1055]
 gi|254738747|ref|ZP_05196450.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254742041|ref|ZP_05199728.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Kruger B]
 gi|254754973|ref|ZP_05207007.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Vollum]
 gi|254762296|ref|ZP_05214140.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Australia 94]
 gi|30254243|gb|AAP24657.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Ames]
 gi|47501067|gb|AAT29743.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49177559|gb|AAT52935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Sterne]
 gi|49328406|gb|AAT59052.1| ABC transporter, substrate-binding protein; probable
           glutamine-binding protein [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|164711299|gb|EDR16853.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0488]
 gi|167511098|gb|EDR86486.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0193]
 gi|167529418|gb|EDR92169.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0442]
 gi|170126596|gb|EDS95481.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0389]
 gi|170667012|gb|EDT17775.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0465]
 gi|172081866|gb|EDT66935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0174]
 gi|190560318|gb|EDV14297.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|195991722|gb|EDX55687.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus W]
 gi|196022044|gb|EDX60734.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB108]
 gi|196027334|gb|EDX65952.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus NVH0597-99]
 gi|218539731|gb|ACK92129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|227003893|gb|ACP13636.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CDC 684]
 gi|228600431|gb|EEK58019.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1]
 gi|228815294|gb|EEM61542.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229266762|gb|ACQ48399.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0248]
          Length = 276

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263


>gi|305431997|ref|ZP_07401164.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Campylobacter coli JV20]
 gi|304445081|gb|EFM37727.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Campylobacter coli JV20]
          Length = 279

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K         + +F  +   N+       L  IK+ G ++ G+      F  V   G 
Sbjct: 1   MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +  D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + +   ISS+  L   ++ +  GTT +      F         + 
Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADAY----FTKEYPDIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     + P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAW--VKEHPEFKMAIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +      +    E     K   +  K     DV+
Sbjct: 233 ELKEFIDNLITKL---GEEQFFHKAYGETLKSHFGDDVK 268


>gi|256750908|ref|ZP_05491792.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256750243|gb|EEU63263.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 260

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 99/262 (37%), Gaps = 17/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55
           M K   + +L + I+     S      A+ L  IK++G +  G +     F   K  G+ 
Sbjct: 1   MNKKPLLLLLTMTIVLSLFLSACGNEPANTLDKIKQKGVIVMGTSADFPPFEFHKVEGNK 60

Query: 56  --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GFD+D   A++  +      ++   ++ K    ALQ+ +ID++      T   + +
Sbjct: 61  DTIVGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMIVAGMTPTP--DRA 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  I Y   Q  ++     I     L G ++ VQ GTT+E              + 
Sbjct: 116 ENVDFSDIYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               RV +     +  RCDA   + +   A            +      +  +A A+ +G
Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + E  NI++     + T+ E  
Sbjct: 231 NKELVNIINEVIKELKTSGEYD 252


>gi|85058784|ref|YP_454486.1| glutamate and aspartate transporter subunit [Sodalis glossinidius
           str. 'morsitans']
 gi|84779304|dbj|BAE74081.1| glutamate-aspartate ABC transporter periplasmic component GltI
           [Sodalis glossinidius str. 'morsitans']
          Length = 298

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 98/263 (37%), Gaps = 14/263 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K      L L+++   +   +A      L  IK  G +  G     + F+        
Sbjct: 3   MRK----LALSLVMIGIAASQAHAEELTGTLKKIKDNGVIVVGHRESSIPFSYYDNQQKV 58

Query: 57  KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+  D+  A+  A+         +++YLP+ +  R   LQ+   D    +T   L R+ 
Sbjct: 59  VGYSQDYSNAIVDAVKKKIDAPNLQVKYLPITSSNRIPLLQNGTYDFECGSTTNNLERQK 118

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F    +  G    + K   I   S L+G ++ V AGTT+E+ L        MK  
Sbjct: 119 --QVDFSDTLFIIGTRLAVKKGALIKDFSDLAGKTVVVTAGTTSEVLLNKLNDEKQMKMR 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   +        R  A+  D + L      + +P +  I+    SK      + +
Sbjct: 177 IISTKDHGDSFRTLENGRAVAFMMDDALLAGEHAKSRKPDQWDIVGTPQSKEAYGCMLRK 236

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D ++  ++  T   + T+ E  
Sbjct: 237 DDAQFKTLMDDTIAHIQTSGEAE 259


>gi|16759617|ref|NP_455234.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29142610|ref|NP_805952.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|25296373|pir||AF0583 ABC transporter periplasmic binding protein (glutamate/ aspartate)
           STY0710 [imported] - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16501909|emb|CAD05136.1| ABC transporter periplasmic binding protein (glutamate/aspartate?)
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138241|gb|AAO69812.1| ABC transporter periplasmic binding protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 308

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 10  RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+       +     +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 70  GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269


>gi|213052442|ref|ZP_03345320.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213425078|ref|ZP_03357828.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
          Length = 302

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+       +     +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263


>gi|157369457|ref|YP_001477446.1| glutamate and aspartate transporter subunit [Serratia
           proteamaculans 568]
 gi|157321221|gb|ABV40318.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 298

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 89/257 (34%), Gaps = 6/257 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L                L  IK  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLLLIGTAANVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+   +  A+         +++ LP+ ++ R   LQ+   D    +T   L R+     
Sbjct: 63  QDYSNQIVEAVKKKLNAPDLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K   +     L+G  + V +GTT+E+ L     +  M    I  
Sbjct: 122 -FSDTIFVVGTRLLVKKGSDVKDFKDLAGKPVVVTSGTTSEVLLNKLNDSGKMNMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +    +P +  I+    SK      + + D E
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEIIATPQSKEAYGCMLRKDDPE 240

Query: 237 WYNIVSWTHYAMVTAEE 253
           +  +V  T     T+ E
Sbjct: 241 FKKLVDDTIAQAQTSGE 257


>gi|83718416|ref|YP_441772.1| glutamate/aspartate ABC transporter periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
 gi|83652241|gb|ABC36304.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
          Length = 298

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 93/259 (35%), Gaps = 8/259 (3%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     + +  L      + +     L  IK  G +  G     + F+    N    G
Sbjct: 1   MMKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+   
Sbjct: 61  YSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M    I
Sbjct: 121 A--FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D + L   +    +P E VI+    S+      + + D
Sbjct: 179 SAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEE 253
             +  +V      +  + E
Sbjct: 239 PAFKKVVDDAIAQVEKSGE 257


>gi|296103387|ref|YP_003613533.1| glutamate/aspartate transport system substrate-binding protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057846|gb|ADF62584.1| glutamate/aspartate transport system substrate-binding protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 316

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 10/261 (3%)

Query: 3   KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    ++L + +      +       S L  I K G +  G     V F+         G
Sbjct: 19  RKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+   
Sbjct: 79  YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   +  K   I   + L G ++ V +GTT+E+ L        M    I
Sbjct: 139 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + L   +    +P    I+    SK      + + D
Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGTAQSKEAYGCMLRKDD 256

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            ++  ++  T   + T+ E  
Sbjct: 257 PQFKKLIDDTIAQVQTSGEAE 277


>gi|261245937|emb|CBG23739.1| ABC transporter periplasmic binding protein (glutamate/aspartate?)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992399|gb|ACY87284.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157265|emb|CBW16753.1| ABC transporter periplasmic binding protein (glutamate/aspartate?)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|323128982|gb|ADX16412.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
          Length = 308

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 10  RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 70  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             E+  ++  T     T+ E  
Sbjct: 248 APEFKKLMDDTIAQAQTSGEAE 269


>gi|167990674|ref|ZP_02571774.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331024|gb|EDZ17788.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
          Length = 302

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             E+  ++  T     T+ E  
Sbjct: 242 APEFKKLMDDTIAQAQTSGEAE 263


>gi|46580747|ref|YP_011555.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120601965|ref|YP_966365.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|46450167|gb|AAS96815.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562194|gb|ABM27938.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311234461|gb|ADP87315.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 270

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 10/229 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
           T+   +A  L +IK+RG L CG+   +V F  +   +    GFDVD C+ ++        
Sbjct: 16  TAAVAHAGKLDEIKQRGTLVCGVKDSVVPFGFIDETSKQLVGFDVDICQFIADRAGVK-- 73

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++   + +  R   L    +D+++        R+    + F    +  GQ  ++ K  G
Sbjct: 74  -LEVKTVTSATRIPMLTQGSVDLVAATMTHKFERD--DVIDFSITYFDAGQRLLVKKGGG 130

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S + L G  +    G+T+E       KA       + F+   +   A +  + +A T 
Sbjct: 131 IKSAADLKGKKVATVKGSTSEKN----MKAAQPDCVVVSFDEYPQAFLALKQGKAEAVTT 186

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D   L  LK ++  P +  I+ D I+  P    +++ D+++ + V+ + 
Sbjct: 187 DEPILVGLKNSDPEPDKWDIVGDFIASEPYGLGLVENDSKFRDFVNKSL 235


>gi|167039129|ref|YP_001662114.1| extracellular solute-binding protein [Thermoanaerobacter sp. X514]
 gi|300913281|ref|ZP_07130598.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           sp. X561]
 gi|307723705|ref|YP_003903456.1| family 3 extracellular solute-binding protein [Thermoanaerobacter
           sp. X513]
 gi|166853369|gb|ABY91778.1| extracellular solute-binding protein, family 3 [Thermoanaerobacter
           sp. X514]
 gi|300889966|gb|EFK85111.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           sp. X561]
 gi|307580766|gb|ADN54165.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           sp. X513]
          Length = 260

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 17/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55
           M K   + +L + I+     S      A+ L  IK++G +  G +     F   K  G+ 
Sbjct: 1   MNKKPLLLLLTMTIVLSLFLSACGNEPANTLDKIKQKGVIVMGTSADFPPFEFHKVEGNK 60

Query: 56  --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GFD+D   A++  +      ++   ++ K    ALQ+ +ID++      T   + +
Sbjct: 61  DTIVGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMIVAGMTPTP--DRA 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  + Y   Q  ++     I     L G ++ VQ GTT+E              + 
Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               RV +     +  RCDA   + +   A            +      +  +A A+ +G
Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + E  NI++     + T+ E  
Sbjct: 231 NKELVNIINEVIKELKTSGEYD 252


>gi|226942880|ref|YP_002797953.1| amino acid ABC transporter perplasmic binding protein [Azotobacter
           vinelandii DJ]
 gi|226717807|gb|ACO76978.1| amino acid ABC transporter, perplasmic binding protein [Azotobacter
           vinelandii DJ]
          Length = 302

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 92/258 (35%), Gaps = 9/258 (3%)

Query: 5   FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
              S L + +   T+F+       L  IK  G +  G     + F+ +  A+    G+  
Sbjct: 7   LLGSALAVALSSGTAFAAEELTGTLKKIKDTGTITLGHRDASIPFSYLGGASRQPIGYSH 66

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       AL   +     K++Y  + ++ R   +Q+  +D+   +T     R     +A
Sbjct: 67  DLQLKVVEALKQQLGLPELKVRYTLVTSQTRIPLVQNGTVDLECGSTTNNQER--QQQVA 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K  GI+    L G ++   AGTT+E  L        M  + I  +
Sbjct: 125 FSVGIFEVGTRLLTRKTSGIADFPDLKGKNVVTTAGTTSERLLKAMNVERQMGMNIIAAK 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + LY       +P +  ++    S       + + D  +
Sbjct: 185 DHGEAFLMLESGRAVAFMMDDALLYGEMAKARKPDDWTVVGTPQSYEIYGCMLRKDDPAF 244

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + E+ 
Sbjct: 245 KKAVDGALTATFESGEIN 262


>gi|71064880|ref|YP_263607.1| ABC glutamate/aspartate transporter, periplasmic binding protein
           GltI [Psychrobacter arcticus 273-4]
 gi|71037865|gb|AAZ18173.1| ABC glutamate/aspartate transporter, periplasmic binding protein
           GltI [Psychrobacter arcticus 273-4]
          Length = 319

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 94/264 (35%), Gaps = 17/264 (6%)

Query: 7   VSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGINTGLVGFAEV-KANGD 55
           ++++  + L     + N+            L  IK+ G +  G     + F+ +      
Sbjct: 13  LTLVAFMALALAGCNNNSQTSTETTNTNGTLDKIKESGTIVVGHRDSSIPFSYIADDPNQ 72

Query: 56  WKGFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+  D       A+   +     KI+Y  + ++ R   +Q+  +D    +T     R+
Sbjct: 73  PIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQ 132

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +   F    +  G   +  K  GI     L G ++   AGTT+E  + +Y     M  
Sbjct: 133 KQVA--FSNGFFEIGTRLLTKKDSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNI 190

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + I  +   E        R +A+  D   L   K     P E VI+ +  S       + 
Sbjct: 191 NIISAKDHGEGFLMLENGRAEAFMMDDVLLAGEKAKAKNPDEWVIVGEPQSFEIYGCMMR 250

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D E+  +V      +  + E+ 
Sbjct: 251 KDDPEFKAVVDDALATVFKSGEIN 274


>gi|322833889|ref|YP_004213916.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321169090|gb|ADW74789.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 298

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 8/257 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K     +L  + +   + +      L  IK  G +  G     V F+         G+ 
Sbjct: 4   RKLALSVLLASVTVSSFAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYNNEQKVVGYS 63

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R      
Sbjct: 64  QDYSDAIVDAVKKKLNLPDLQVKMMPITSQNRIPLLQNGTYDFECGSTTNNLER--QQQA 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF    +  G   ++ K   I   + L G ++ V +GTT+E+ L    +   +    I  
Sbjct: 122 AFSDTIFVIGTRLLVKKGSEIKDFTDLKGKTVVVTSGTTSEVLLNKLNEEKKLDLRIISA 181

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R  A+  D + L   +    +P    I+    SK      + + D E
Sbjct: 182 KDHGDSFRTLETGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMMRKDDAE 241

Query: 237 WYNIVSWTH-YAMVTAE 252
           +  +V  T   A  + E
Sbjct: 242 FKKLVDDTIVQAQTSGE 258


>gi|238755070|ref|ZP_04616418.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri
           ATCC 29473]
 gi|238706774|gb|EEP99143.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri
           ATCC 29473]
          Length = 298

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 88/249 (35%), Gaps = 6/249 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L  +             L  IK  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLLLVGMASSVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+   +  A+         +++ +P+ ++ R   LQ+   D    +T   L R+     
Sbjct: 63  QDYSNLIVDAVKKKLNLPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K  GI     L+G ++ V +GTT+E+ L    + + M    I  
Sbjct: 122 -FSNTIFVVGTRLLTKKDSGIKDFKDLAGKAVVVTSGTTSEVLLNKLNEENKMDMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +    +  E  I+    S+      + + D +
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKAGEWEIVGTPQSQEAYGCMLRKDDPQ 240

Query: 237 WYNIVSWTH 245
           +  ++  T 
Sbjct: 241 FKALMDQTI 249


>gi|33598570|ref|NP_886213.1| amino-acid ABC transporter binding protein precursor [Bordetella
           parapertussis 12822]
 gi|33603520|ref|NP_891080.1| amino-acid ABC transporter binding protein precursor [Bordetella
           bronchiseptica RB50]
 gi|33574699|emb|CAE39356.1| amino-acid ABC transporter binding protein precursor [Bordetella
           parapertussis]
 gi|33577644|emb|CAE34909.1| amino-acid ABC transporter binding protein precursor [Bordetella
           bronchiseptica RB50]
          Length = 299

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 92/251 (36%), Gaps = 6/251 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V    L+ +  ++ +     L  IK  G +  G     + F+ +       G+ ++
Sbjct: 2   KISTVFFAALVGVAASAPAHAEGRLDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSME 61

Query: 63  FCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C     A+ + +     K+  +P+ +  R   + +  +D++  +   T+ R     +AF
Sbjct: 62  ICEKAVEAIKAKLGMAQIKVNLVPVTSSTRIPLVANGTVDLVCGSATNTVER--QQQVAF 119

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            P T+     F   K   +  +  + G ++   AGT+    L    +   +    I  + 
Sbjct: 120 APTTFVTATRFAAKKSSNLKKLDDMKGKTVVSTAGTSNIRWLTQANEKDGLDMRIIPTKD 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      R  A+  D   L  L  T  +P E +I  D  +  P A  + + D  + 
Sbjct: 180 HPAAMLTVANGRAAAFFMDDVLLAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAFK 239

Query: 239 NIVSWTHYAMV 249
            +V  T   M+
Sbjct: 240 KVVDDTVTGMM 250


>gi|163938563|ref|YP_001643447.1| extracellular solute-binding protein [Bacillus weihenstephanensis
           KBAB4]
 gi|229131583|ref|ZP_04260466.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196]
 gi|163860760|gb|ABY41819.1| extracellular solute-binding protein family 3 [Bacillus
           weihenstephanensis KBAB4]
 gi|228651874|gb|EEL07828.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196]
          Length = 276

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQDGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +    + 
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 178 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M    E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263


>gi|110347169|ref|YP_665987.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110283280|gb|ABG61340.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 303

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 8/260 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      + +  +   + + +    L  IK  G +  G     V F+ +       G+
Sbjct: 1   MLKKLCAFAVVMTAMCGGASADDLTGTLKKIKDTGVITVGNRDSSVPFSYLDDKQQPVGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            VD C     A+   +  D  ++++ P+ +  R   + +  +D+   +T  T  R+  + 
Sbjct: 61  AVDICLKVVDAVKERLKLDKLEVRFNPVTSATRIPLIANGTVDLECGSTFNTAERQKQVA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +     F+  K   ++S++ L G S+   +GT     L +   A  +  + I 
Sbjct: 121 --FSNTYFLTANRFVAKKSSNLNSIADLKGQSVVSTSGTVNIQELNEVNTAQQLGMNIIA 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGD 234
                E        R  A+  D   L +L   +  PS + I  D   +  P A  + + D
Sbjct: 179 ANDHAEAFLMVETGRAAAFVMDDILLASLVAGSRDPSGYAISQDAFSNPQPYAIMLRRDD 238

Query: 235 TEWYNIVSWTHYAMVTAEEL 254
            E+  +V     A+  + E+
Sbjct: 239 AEFKELVDDATAALYKSPEM 258


>gi|328956549|ref|YP_004373935.1| major cell-binding factor [Carnobacterium sp. 17-4]
 gi|328672873|gb|AEB28919.1| major cell-binding factor [Carnobacterium sp. 17-4]
          Length = 274

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 23/264 (8%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLV 45
           M K     +++   +LF  + S++ S               +  IK+ G LK G+   + 
Sbjct: 1   MKKRNLLATVILSSVLFLGACSSDDSSTTEADTPKGSDQLTIESIKEAGVLKVGVKEDVP 60

Query: 46  GFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
            F     + G+ +GF++D  + ++  I  DP  I+  P+ AK R   L + ++D++    
Sbjct: 61  NFGLKNTDTGEIEGFEIDIAKKIAEDILGDPDAIELTPVTAKTRGPLLDNGEVDMVIATF 120

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+ +    F    Y D  G ++ K K    +  + GA++ V   +TT   +A   
Sbjct: 121 TVTEERKET--YNFSDAYYEDAVGLLVKKDKNYEGLKDMDGANVGVAQSSTTSEAIASEA 178

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + +++      +    EI AA  + R DA++ D S L              ILPD  +  
Sbjct: 179 EQYDIAVEFSEYATYPEIKAALDSGRVDAFSVDRSILAGYL-----DDSTEILPDRFATQ 233

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAM 248
               A  + +TE    V+      
Sbjct: 234 DYGIATKKTNTELAEHVNGLITTW 257


>gi|297544040|ref|YP_003676342.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841815|gb|ADH60331.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 260

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 17/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55
           M K  F ++L + ++     +   S     L  IK++G +  G +     F   K  G+ 
Sbjct: 1   MNKKSFTALLIITLVLSLFLAGCGSKPTNTLEKIKQKGVIVMGTSADFPPFEFHKVEGNK 60

Query: 56  --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GFD+D   A++  +      ++   ++ K    ALQS +ID++      T   + +
Sbjct: 61  DTIVGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQSGRIDMIVAGMTPTP--DRA 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  + Y   Q  ++     I     L G ++ VQ GTT+E              + 
Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               RV +     +  RCDA   + +   A            +      +  +A A+ +G
Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + E  NI++     +  + E  
Sbjct: 231 NKELVNIINEVIKDLKASGEYD 252


>gi|226310804|ref|YP_002770698.1| glutamine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226093752|dbj|BAH42194.1| glutamine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 283

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 102/267 (38%), Gaps = 21/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTS----------FSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M     +S   L      S           +     L  IK+R     G+   L  F   
Sbjct: 13  MGLVLMLSATALAGCGGGSTTEGGAKGTPAAAGTGTLAKIKERDKFVVGVKYDLNLFGLK 72

Query: 51  KA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G+ +GFD+D  +A++  +  D +KI+   + +K R   L++ +ID +      T  
Sbjct: 73  DPATGNVEGFDIDIAKAIAKKVLGDENKIELKEVTSKTRIPMLKNGEIDAIIATMTITED 132

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHN 168
           R+    + F  + +  GQ F++ K   I+ +  +  G  I    G+T+   +        
Sbjct: 133 RKK--EVDFSDVYFLAGQSFLVKKDSPINGLKDMQKGMKIVTAKGSTSAKNIRASAP--- 187

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + FE   E   A +A + DA T D + LY +   +     + +  +  ++ P   
Sbjct: 188 -DVEVLEFENYAEAFTALKAGQGDALTTDNALLYGMAKQDPN---YRVTEETFTEEPYGI 243

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
           AI +GD E+   V+     M    E  
Sbjct: 244 AISKGDAEFVKTVNDLLKEMKENGEYD 270


>gi|134093508|ref|YP_001098583.1| glutamate/aspartate periplasmic binding protein ABC transporter
           [Herminiimonas arsenicoxydans]
 gi|133737411|emb|CAL60454.1| Glutamate/aspartate periplasmic binding protein precursor
           [Herminiimonas arsenicoxydans]
          Length = 300

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 106/264 (40%), Gaps = 11/264 (4%)

Query: 1   MY-----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M      K    + +   ++        +  L  IK+ G +  G     + F+ +     
Sbjct: 1   MKSTTLLKTLIGAAMMSTLMTAAQAQELSGTLKKIKETGEITIGYRESSIPFSFLDDKQQ 60

Query: 56  WKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+ +D C  +   +  D      K++  P+ +  R   L +  ID+   +T  ++ R 
Sbjct: 61  PIGYAMDLCMKIVGTVKADLKLPALKVKLQPVTSSNRIPLLNNGTIDLECGSTTNSIAR- 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               +AF P  +       + K   I++++QL G ++   +GTT+   L  Y KA N + 
Sbjct: 120 -QEQVAFGPTYFVINVTAAVKKSSNINTIAQLDGKTVSTTSGTTSVPLLKAYKKAGNAQV 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  +   E        R  A+  D   L        RP ++ ILP+ + + P +  + 
Sbjct: 179 KEIYGKDHAEAFLLMADDRAAAFVMDDILLAGQIANAKRPGDYKILPESLRQEPYSMMLR 238

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           +GD ++  +V  +  A++ + E+ 
Sbjct: 239 KGDPQFKALVDKSITAVMQSGEID 262


>gi|170742663|ref|YP_001771318.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168196937|gb|ACA18884.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 301

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 96/256 (37%), Gaps = 7/256 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + ++        S    +  L  IK+ G +  G     V F+ +  N    G+ +D
Sbjct: 4   KRLLILLVAGFAALPASAEELSGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMD 63

Query: 63  FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C     A+ + +     +++  P+ +  R   + +  +D+   +T   +  +    ++F
Sbjct: 64  ICYKVVDAVKAKLGLPNLEVKLNPVTSATRIPLIANGTVDLECGSTTNNV--DRQKQVSF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +     F+  K   +S    L G ++   +GTT    + +Y  A+ +    +  + 
Sbjct: 122 TNTHFLTASRFVAKKSSNVSKFDDLKGKTVVSTSGTTNIRQINEYNAANKLGITILPAKD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237
             E        R  A+  D   L +L  ++  P  ++I  D ISK  P    + + D  +
Sbjct: 182 HAEAFLMVETGRAVAFVMDDVLLASLAASSKEPDAYLISTDAISKPEPYGIMLRKDDAPF 241

Query: 238 YNIVSWTHYAMVTAEE 253
             +V     A   + E
Sbjct: 242 KKVVDDATAAFYQSPE 257


>gi|289577746|ref|YP_003476373.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           italicus Ab9]
 gi|289527459|gb|ADD01811.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           italicus Ab9]
          Length = 260

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 17/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55
           M K  F ++L + ++     +   S     L  IK++G +  G +     F   K  G+ 
Sbjct: 1   MNKKSFTALLIITLVLSLFLAGCGSKPTNTLEKIKQKGVIVMGTSADFPPFEFHKVEGNK 60

Query: 56  --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GFD+D   A++  +      ++   ++ K    ALQS +ID++      T   + +
Sbjct: 61  DTIVGFDIDIANAIAKRLGVK---LEIKDMDFKGLIPALQSGRIDMIVAGMTPTP--DRA 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  + Y   Q  ++     I     L G ++ VQ GTT+E              + 
Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               RV +     +  RCDA   + +   A            +      +  +A A+ +G
Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + E  NI++     +  + E  
Sbjct: 231 NKELVNIINEVIKDLKASGEYD 252


>gi|193885219|pdb|2VHA|A Chain A, Debp
 gi|193885220|pdb|2VHA|B Chain B, Debp
          Length = 287

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 2   AAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 61

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 62  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 119

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 120 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 179

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   + T+ E 
Sbjct: 180 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 239

Query: 255 G 255
            
Sbjct: 240 E 240


>gi|260597072|ref|YP_003209643.1| glutamate and aspartate transporter subunit [Cronobacter turicensis
           z3032]
 gi|260216249|emb|CBA29167.1| Glutamate/aspartate periplasmic-binding protein [Cronobacter
           turicensis z3032]
          Length = 314

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 10/259 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    ++L + +    + + +AS     L  IK  G +  G     V F+         G
Sbjct: 17  RKLTAAMLVMGLSAGLAHAEDASGGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVG 76

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+   
Sbjct: 77  YSQDYSNAIVEAVKKQLNKPDLQVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 136

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   ++ K   I     L G ++ V +GTT+E+ L        M    I
Sbjct: 137 A--FSDTIFVVGTRLLVKKGGPIKDFPDLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 194

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + L   +    +     I+    SK      + +GD
Sbjct: 195 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKQDNWEIVGTPQSKEAYGCMLRKGD 254

Query: 235 TEWYNIVSWTHYAMVTAEE 253
             +  +V  T     T+ E
Sbjct: 255 ESFKKLVDDTIAQAQTSGE 273


>gi|229095292|ref|ZP_04226284.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29]
 gi|228688151|gb|EEL42037.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29]
          Length = 275

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 99/269 (36%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIRLLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I  +  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKGIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E     +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTGLKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKASGEYD 263


>gi|167837860|ref|ZP_02464743.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis MSMB43]
          Length = 297

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 9/259 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   V +  L      + +     L  IK  G +  G     + F+    +    G
Sbjct: 1   MKFPKAMLV-VAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVG 59

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+   
Sbjct: 60  YSRDFQMKVVDAVKKKLNLSNLQVRNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M  + I
Sbjct: 120 A--FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNII 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D + L   +    +P E VI+    S+      + + D
Sbjct: 178 SAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDD 237

Query: 235 TEWYNIVSWTHYAMVTAEE 253
             +  +V      +  + E
Sbjct: 238 PAFKKVVDDAIAQVEKSGE 256


>gi|94309287|ref|YP_582497.1| extracellular solute-binding protein [Cupriavidus metallidurans
           CH34]
 gi|93353139|gb|ABF07228.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Cupriavidus metallidurans
           CH34]
          Length = 302

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 96/265 (36%), Gaps = 12/265 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M + F      L+ +   + S        +  L  IK  G +  G  T  + F+   AN 
Sbjct: 1   MNQFFMTRAAVLMAVSLGAGSALAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDANQ 60

Query: 55  DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              GF  D C  +  A+  +      +++ +P+ ++ R   +Q+  +D+    T     R
Sbjct: 61  KVIGFSQDICDRVIDAVKKETGTPNLQVRMVPVTSQNRQSLVQNGTVDLECGVTTNLKSR 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                +AF    +  G   ++ K   +     LSG ++   AGTT+E  L          
Sbjct: 121 --QQQVAFSTTFFVAGTRLLVKKGSPVHDFGDLSGKAVVTNAGTTSERILRKLNDEKGAN 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 +   E     ++ R  A+  D   L   +     P++ V++    S       +
Sbjct: 179 ITIQSAKDYGESFLILQSGRVAAFMMDDVLLSGSRTLAPNPNDWVVVGTPQSFEAYGFMM 238

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255
            + D  +  +V  T   ++ + E+ 
Sbjct: 239 RKDDPGFKQVVDATTTGLMRSGEIN 263


>gi|167586129|ref|ZP_02378517.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 297

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +    L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYHKAILMAAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D       A+   +     +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SRDFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  GI   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|303249936|ref|ZP_07336138.1| putative ABC transporter, periplasmic binding protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|302650999|gb|EFL81153.1| putative ABC transporter, periplasmic binding protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
          Length = 278

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 1   MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 61  VDANGKNQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   IS + QL G ++ V  GTT +      F  ++ 
Sbjct: 121 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 233 VQKGNQALLDVINK 246


>gi|50120253|ref|YP_049420.1| glutamate and aspartate transporter subunit [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610779|emb|CAG74224.1| glutamate/aspartate periplasmic binding protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 298

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 90/259 (34%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     IL             A  L  +K  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62

Query: 61  VD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
                    A+   +     +++ LP+ ++ R   LQ+   D+   +T   L R+     
Sbjct: 63  QAYSDKIVEAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K  G+     L+G ++ V +GTT+E+ L    +   MK   I  
Sbjct: 122 -FSNTIFVVGTRLLAKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +       +  I+    S+      + + D +
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   + T+ E  
Sbjct: 241 FKKLVDDTIAEVQTSGEAD 259


>gi|313144530|ref|ZP_07806723.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter cinaedi CCUG 18818]
 gi|313129561|gb|EFR47178.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter cinaedi CCUG 18818]
          Length = 286

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 15/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASI---LGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K     +  + +++ ++       A     +  IK+ G L+ G+      F  +  NG
Sbjct: 12  MKKWIVAFLATICVIWLSACGDDKAQAQTSRGVEQIKQNGVLRVGVFGDKPPFGFIDENG 71

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+   + L+  +  D SKI+++   A  R   L+S ++DI+  N   T  RE   
Sbjct: 72  KNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRVEFLRSNKVDIIMANFTQTKEREE-- 129

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F         G +      I SV  L G  + V  GTT ++     F  ++     +
Sbjct: 130 AVDFAKPYMKVSLGVVSPNG-EIKSVEDLKGKKLIVNKGTTADVY----FSKNHPDIELL 184

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E+  +   A +  R DA   D + + A  +  + P   V +P +  +  +APA+ +G+
Sbjct: 185 KYEQNTQAFLALKDKRGDALAHDNTLVLAWAM--ENPGFGVGIPTLGEEDVIAPAVKKGN 242

Query: 235 TEWYNIVSWTHY 246
            E    +     
Sbjct: 243 VELKTWLDEEIT 254


>gi|303246863|ref|ZP_07333140.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
 gi|302491880|gb|EFL51760.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
          Length = 272

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 10/256 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K  ++S L  ++    + +  A  L DIK RG L  G+      F  V        GF
Sbjct: 1   MRKIAWISTLACLLTLLAAAAATAGKLDDIKARGALVAGVKDSQPPFGYVDEKTNQIVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  +AL+  +      ++  P+ +  R   L    +DI++        RE    + F 
Sbjct: 61  EIDLMQALAKRLGVK---LELKPVTSSTRIPMLGQGAVDIVAATMTHKKERE--DQIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ  ++ K  G+ SV+ L+G  +    G+T+E  +    K        I FE  
Sbjct: 116 ITYFMTGQKLLVKKGGGVQSVADLNGKKVASVKGSTSEQNV----KKAQPGCTVISFETY 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +  +  A T D S L  ++ ++D P +  I+ D IS  P    + + D+++ +
Sbjct: 172 PEAFLALKQGKVQAMTTDESILVGIRNSDDHPEKWEIVGDYISPEPYGFGLPENDSDFRD 231

Query: 240 IVSWTHYAMVTAEELG 255
            V+     M    E  
Sbjct: 232 YVNLALMNMWETGEYQ 247


>gi|76808998|ref|YP_334805.1| glutamate/aspartate periplasmic binding protein [Burkholderia
           pseudomallei 1710b]
 gi|167721209|ref|ZP_02404445.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei DM98]
 gi|167740181|ref|ZP_02412955.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 14]
 gi|167817396|ref|ZP_02449076.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 91]
 gi|167825802|ref|ZP_02457273.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 9]
 gi|167895874|ref|ZP_02483276.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 7894]
 gi|167912523|ref|ZP_02499614.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 112]
 gi|167920474|ref|ZP_02507565.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei BCC215]
 gi|254190906|ref|ZP_04897412.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|76578451|gb|ABA47926.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei 1710b]
 gi|157938580|gb|EDO94250.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 297

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 61  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M    I 
Sbjct: 121 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 179 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 239 AFKKVVDDAIVQVEKSGE 256


>gi|167904262|ref|ZP_02491467.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 300

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 4   MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 64  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 123

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M    I 
Sbjct: 124 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 182 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIIGKPQSQEAYGCMMRKDDP 241

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 242 AFKKVVDDAIVQVEKSGE 259


>gi|167580590|ref|ZP_02373464.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis TXDOH]
 gi|167618697|ref|ZP_02387328.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis Bt4]
 gi|257137940|ref|ZP_05586202.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
          Length = 297

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 61  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M    I 
Sbjct: 121 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 179 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 239 AFKKVVDDAIAQVEKSGE 256


>gi|119896733|ref|YP_931946.1| putative glutamine-binding protein [Azoarcus sp. BH72]
 gi|119669146|emb|CAL93059.1| putative glutamine-binding protein [Azoarcus sp. BH72]
          Length = 299

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 93/235 (39%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80
             L  IK  G +  G     V F+ + A+    G+ +D C     A+   +     +++Y
Sbjct: 28  GTLKKIKDSGTITVGHRESSVPFSYLDADQKPVGYAMDLCAKVVDAVKDELKLPKLEVKY 87

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             + ++ R   +Q+  IDI   +T  ++ R+  +G  F    +       + K  GI  +
Sbjct: 88  QAVTSQNRIPLMQNGTIDIECGSTTNSVQRQQQVG--FSVNYFVTSVRMAVRKDSGIKDI 145

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  +    GTT++  +    K  ++    I  +   +      + R  A+  D   
Sbjct: 146 GDLNGKPVATTTGTTSDALIKQNEKGKSIDVRNIYGKDHADSFLMVESGRAAAFVMDDIL 205

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L  L  ++  P+ + I+   +   P    + + DTE+  +V      ++ + E  
Sbjct: 206 LAGLIASSKNPAAYEIVGPSLRDEPYGVMLRKDDTEFKAVVDKALTGLMKSGEAE 260


>gi|315638784|ref|ZP_07893956.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Campylobacter upsaliensis JV21]
 gi|315481002|gb|EFU71634.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Campylobacter upsaliensis JV21]
          Length = 282

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 14/277 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K         + +F  +  ++ S    +  IK  G +K G+      F  V   G  +
Sbjct: 6   MKKILLSIFTAFVAVFLAACDSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGANQ 65

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+ F + ++  +  D +K++++ + A  R   L+S ++DI+  N   T  R     + 
Sbjct: 66  GYDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--QVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F         G ++ +   I SV  L   ++ +  GTT +      F  +      + F+
Sbjct: 124 FALPYMKVALGVVVPEDSEIKSVEDLKDKTLILNKGTTADAY----FTKNYADIKTLKFD 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E  AA    R DA   D + L+A     +RP   V++ ++ ++  +APA+ +GD E 
Sbjct: 180 QNTETFAALMDKRGDALAHDNTLLFAW--VKERPDYKVVIKELGNQDVIAPAVKKGDKEL 237

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              +       + AE+     K  ++  K     D++
Sbjct: 238 KEFIDNLII-SLAAEQF--FHKAYDESLKAHFGADIK 271


>gi|224438086|ref|ZP_03659025.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter cinaedi CCUG 18818]
          Length = 275

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 15/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASI---LGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K     +  + +++ ++       A     +  IK+ G L+ G+      F  +  NG
Sbjct: 1   MKKWIVAFLATICVIWLSACGDDKAQAQTSRGVEQIKQNGVLRVGVFGDKPPFGFIDENG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+   + L+  +  D SKI+++   A  R   L+S ++DI+  N   T  RE   
Sbjct: 61  KNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRVEFLRSNKVDIIMANFTQTKEREE-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F         G +      I SV  L G  + V  GTT ++     F  ++     +
Sbjct: 119 AVDFAKPYMKVSLGVVSPNG-EIKSVEDLKGKKLIVNKGTTADVY----FSKNHPDIELL 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E+  +   A +  R DA   D + + A  +  + P   V +P +  +  +APA+ +G+
Sbjct: 174 KYEQNTQAFLALKDKRGDALAHDNTLVLAWAM--ENPGFGVGIPTLGEEDVIAPAVKKGN 231

Query: 235 TEWYNIVSWTHY 246
            E    +     
Sbjct: 232 VELKTWLDEEIT 243


>gi|53720532|ref|YP_109518.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei K96243]
 gi|52210946|emb|CAH36934.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei K96243]
          Length = 300

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 4   MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 64  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 123

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M    I 
Sbjct: 124 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 182 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 241

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 242 AFKKVVDDAIVQVEKSGE 259


>gi|165977129|ref|YP_001652722.1| putative ABC transporter, periplasmic binding protein
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165877230|gb|ABY70278.1| putative ABC transporter, periplasmic binding protein
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 278

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 1   MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 61  VDANGKSQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   IS + QL G ++ V  GTT +      F  ++ 
Sbjct: 121 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 233 VQKGNQALLDVINK 246


>gi|126439062|ref|YP_001060407.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 668]
 gi|126452231|ref|YP_001067668.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1106a]
 gi|134280250|ref|ZP_01766961.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 305]
 gi|217420638|ref|ZP_03452143.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 576]
 gi|226196796|ref|ZP_03792375.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813798|ref|YP_002898249.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           pseudomallei MSHR346]
 gi|242316081|ref|ZP_04815097.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1106b]
 gi|254180661|ref|ZP_04887259.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1655]
 gi|254299254|ref|ZP_04966704.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 406e]
 gi|126218555|gb|ABN82061.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 668]
 gi|126225873|gb|ABN89413.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1106a]
 gi|134248257|gb|EBA48340.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 305]
 gi|157809157|gb|EDO86327.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 406e]
 gi|184211200|gb|EDU08243.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1655]
 gi|217396050|gb|EEC36067.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 576]
 gi|225931056|gb|EEH27064.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504398|gb|ACQ96716.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           pseudomallei MSHR346]
 gi|242139320|gb|EES25722.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1106b]
          Length = 328

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 32  MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 91

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 92  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 151

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M    I 
Sbjct: 152 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 209

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 210 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 269

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 270 AFKKVVDDAIVQVEKSGE 287


>gi|146310840|ref|YP_001175914.1| glutamate and aspartate transporter subunit [Enterobacter sp. 638]
 gi|145317716|gb|ABP59863.1| L-glutamate-binding protein / L-aspartate-binding protein
           [Enterobacter sp. 638]
          Length = 301

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 10/261 (3%)

Query: 3   KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    ++L + +      +       S L  I K G +  G     V F+         G
Sbjct: 4   RKLATAMLVMGMSASVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 63

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+   
Sbjct: 64  YSQDYSNAIVEAVKKKLNKPDLEVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 123

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   +  K   I   + L G ++ V +GTT+E+ L    +   M    I
Sbjct: 124 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNEEKKMDMRII 181

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + L   +    +P    I+    SK      + + D
Sbjct: 182 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDD 241

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            ++  ++  T     T+ E  
Sbjct: 242 ADFKKLIDDTIAKTQTSGEAE 262


>gi|254253239|ref|ZP_04946557.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124895848|gb|EAY69728.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 300

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 94/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +    L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 4   MKYHKAVLMAAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 64  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 121

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  GI   + L G ++   AGTT+E  L        M  + I 
Sbjct: 122 AAFSNTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIIS 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GDT
Sbjct: 182 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 241

Query: 236 EWYNIVSWTHYAMVTAEE 253
           E+  +V      +  + E
Sbjct: 242 EFKKVVDDAIAQVEKSGE 259


>gi|150017371|ref|YP_001309625.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903836|gb|ABR34669.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 290

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 27/298 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGL 44
           M   K    ++L   ++  +                  ++S L DIKKRG +K G+ +  
Sbjct: 1   MKSIKKIVAALLLSTVVVGSFVGCGNSAQTNNGDSNKASSSSLEDIKKRGTIKIGVFSDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V + G  +GFDV   +  +  +  D SK++++ ++A  R   L+SK++DI+  N 
Sbjct: 61  APFGYVDSEGKNQGFDVYVAKRFAKDLLGDESKVEFVLVDAASRVSYLESKKVDIIMANF 120

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +      I+S  QL G  + V  GTT E  +    
Sbjct: 121 TVTDERKE--KVDFANPYMKVSLGVVSPDGAKITSEDQLKGKKVIVAKGTTAETYMT--- 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
             ++     + +E+  EI  A +  R DA   D + + A     D P   V +P + S  
Sbjct: 176 -KNHPDVELVKYEQYSEIFQALKDKRGDAILSDNTEVIAWA--KDNPGFSVGIPSLGSTD 232

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282
            +APA+ +G+TE  + ++    ++    +     K  ++  K     + +  L ++  
Sbjct: 233 TIAPAVTKGNTELRDWINTELESL---GKENFVHKAYDETLKSVYGAEFEDSLVVEGG 287


>gi|171321021|ref|ZP_02910008.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171093718|gb|EDT38862.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 297

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 95/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  +   + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYQKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F   +  A+         +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SREFQMKIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFTDLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GDT
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|322513416|ref|ZP_08066532.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinobacillus ureae ATCC 25976]
 gi|322120804|gb|EFX92674.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinobacillus ureae ATCC 25976]
          Length = 277

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 18/253 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M      K    + +    L        + S+    +  IK  G ++ G+      F  V
Sbjct: 1   MKLNTTLKTLLATAIAAFALTACDNGNNAPSSAQDSVAQIKANGVIRIGVFGDKPPFGYV 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  R
Sbjct: 61  DANGKSQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVKYLKSNKVDLILANFTKTPER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                + F         G +  K   I+ + QL G ++ V  GTT +      F  ++ +
Sbjct: 121 AEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTGDAY----FTKNHPE 174

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
            + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA+
Sbjct: 175 INLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGLAEQIAPAV 232

Query: 231 IQGDTEWYNIVSW 243
            +G+     +++ 
Sbjct: 233 QKGNQALLEVINK 245


>gi|117619722|ref|YP_857305.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561129|gb|ABK38077.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 283

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 18/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L  L   + +   S L  + +RG L+ G + G   F      G + GFD
Sbjct: 22  MIKKLILSTLLLCGL---ANAAPTSTLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGFD 78

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +      ++++         AL + + D++      T  R  +L + F  
Sbjct: 79  VDLAKMVAKEMGVK---VEFVNTAWDGIIPALLTDKFDVIMGGMTVTPQR--NLRVNFAD 133

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K     I S + L+       V+ GTT E  +             + F
Sbjct: 134 PYIVVGQTIVLRKDKAGEIKSFTDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQF 189

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E  ++        + DA+  D+         N     H  L    +  PLA AI +GD +
Sbjct: 190 ETQDDAKLEVINGKVDAFVYDLPYNAIFATQNKGAVVH--LDKPFTFEPLAWAIRKGDQD 247

Query: 237 WYNIVSWTH 245
             N  +   
Sbjct: 248 TLNWFNNYL 256


>gi|307253362|ref|ZP_07535233.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859041|gb|EFM91083.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 298

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 21  MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 81  VDANGKNQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   IS + QL G ++ V  GTT +      F  ++ 
Sbjct: 141 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 194

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 253 VQKGNQALLDVINK 266


>gi|294338803|emb|CAZ87137.1| Glutamate/aspartate periplasmic binding protein ABC transporter
           [Thiomonas sp. 3As]
          Length = 297

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 7/260 (2%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K  F ++IL    +     +     L  +K+   +  G     + F+ +  NG   G+
Sbjct: 1   MIKKLFGLTILAAAAISCAQAAELTGTLKKVKETNSITVGYRESSIPFSYLDNNGKPIGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            ++ C  +  A+  D      K+ Y P+ +  R   L++  ID+   +T  ++ R+  + 
Sbjct: 61  AMELCGKVVDAVKADLKMPGLKVNYTPVTSSNRIPLLENGTIDLECGSTTNSVARQKQVA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F P  +       + K  GI+  +QL+G +I   +GTT    L  Y K  +M++  I 
Sbjct: 121 --FGPTYFVINVTAAVKKDSGINDFAQLAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIY 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D   L      +  P+ + ILP  + + P +  + + D 
Sbjct: 179 GKDHAESFLLMADGRASAFVMDDILLAGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           ++  +V  T   ++ + E+ 
Sbjct: 239 QFKALVDKTIDGVMKSGEIN 258


>gi|212712951|ref|ZP_03321079.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM
           30120]
 gi|212684429|gb|EEB43957.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM
           30120]
          Length = 297

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 10/245 (4%)

Query: 9   ILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           ++  ++L   + +  A      L  IK  G +  G     V F+    N    G+  D+ 
Sbjct: 6   LVLTMMLLGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNNQKVVGYSQDYS 65

Query: 65  RALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
             +  A+         +++ +P+ ++ R   LQ+   D    +T   L R+      F  
Sbjct: 66  NLIVDAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSN 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   +  K  GI   + L+G ++ V +GTT+E+ L       NMK   I  +   
Sbjct: 124 TIFVVGTRLLAKKDSGIKDFADLAGKNVVVTSGTTSEVILNKLNDEKNMKMRIISAKDHG 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +      + R  A+  D + L   +    +P    I+    ++      + + D ++  +
Sbjct: 184 DSFRTLESGRAVAFMMDDALLAGERAKAKQPDIWEIVAKPQTEEAYGCMLRKDDPQFKAL 243

Query: 241 VSWTH 245
           V  T 
Sbjct: 244 VDDTI 248


>gi|89897433|ref|YP_520920.1| hypothetical protein DSY4687 [Desulfitobacterium hafniense Y51]
 gi|89336881|dbj|BAE86476.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 276

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 8/221 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L +IK+RG L+ G+ +    F  V ANG  +GFDV+  R  +  +  D SK++++ + 
Sbjct: 27  GSLEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFVLVE 86

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A  R   L+S ++DI+  N   T  R     + F         G +      I+S+ QL 
Sbjct: 87  AANRVPYLESNKVDIIMANFTVTEER--KQKVDFANPYMKVALGIVSPDGALITSIDQLQ 144

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  + V  GTT      DY   ++     + +++  E   A +  R  A   D + + A 
Sbjct: 145 GKKVIVNKGTTA----QDYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEVLAW 200

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 P   V +P + S   +APA+ +GDTE  N ++   
Sbjct: 201 A--KSNPGFTVGVPALGSTDTIAPAVKKGDTELLNWINQEL 239


>gi|322418597|ref|YP_004197820.1| family 3 extracellular solute-binding protein [Geobacter sp. M18]
 gi|320124984|gb|ADW12544.1| extracellular solute-binding protein family 3 [Geobacter sp. M18]
          Length = 273

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 94/258 (36%), Gaps = 13/258 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57
           M +     + +  L        +  A  L ++KK+G L  G+   L  F  V     +  
Sbjct: 1   MKRLAAVVMGLALLGSFGKAMAAAPADTLAEVKKKGVLVAGVKDSLPPFGYVDEKSREIV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVDF +A++  +      ++  P+ +  R   L    IDI++        R   +G  
Sbjct: 61  GYDVDFVKAIAKKLGVK---VELKPVTSASRMPQLTEGNIDIIAATMTKNPERAKQIG-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  GQ FI  K   +  +  L G  I    G+T+E  +             + F+
Sbjct: 116 FSHTYFATGQKFITVKG-KVKGLKDLQGKKIGTAKGSTSEQNVKTALPTA----TVLAFD 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +   A +  +  A T D + L  +       ++  I    IS  P    + + D ++
Sbjct: 171 DYPQAFLALQQGKVAAVTTDEAILAGILAKAPNKAKFEIPNLQISNEPYGLGMRKDDAKF 230

Query: 238 YNIVSWTHYAMVTAEELG 255
              V  T   M  + E  
Sbjct: 231 IAFVDKTILEMEKSGEAR 248


>gi|33591321|ref|NP_878965.1| amino-acid ABC transporter binding protein precursor [Bordetella
           pertussis Tohama I]
 gi|33570963|emb|CAE40435.1| amino-acid ABC transporter binding protein precursor [Bordetella
           pertussis Tohama I]
          Length = 299

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 93/251 (37%), Gaps = 6/251 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V    L+ +  ++ +     L  IK  G +  G     + F+ +       G+ ++
Sbjct: 2   KISTVFFAALVGVAASAPAHAEGRLDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSME 61

Query: 63  FCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C     A+ + +     K+  +P+ +  R   + +  +D++  +   T+ R     +AF
Sbjct: 62  ICEKAVEAIKAKLGMAQIKVNLVPVTSSTRIPLVANGTVDLVCGSATNTVER--QQQVAF 119

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            P T+     F   K   +  +  + G ++   AGT+    L    +  ++    I  + 
Sbjct: 120 APTTFVTATRFAAKKSSNLKKLDDMKGKTVVSTAGTSNIRWLTQANEKDSLDMRIIPTKD 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      R  A+  D   L  L  T  +P E +I  D  +  P A  + + D  + 
Sbjct: 180 HPAAMLTVANGRAAAFFMDDVLLAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAFK 239

Query: 239 NIVSWTHYAMV 249
            +V  T   M+
Sbjct: 240 KVVDDTVTGMM 250


>gi|260891043|ref|ZP_05902306.1| CjaA protein [Leptotrichia hofstadii F0254]
 gi|260859070|gb|EEX73570.1| CjaA protein [Leptotrichia hofstadii F0254]
          Length = 279

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 15/256 (5%)

Query: 1   MYKDF-----FVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K+F      ++IL L +   +    S     +  IKK G ++ G+      F  V  N
Sbjct: 1   MKKNFERLVKIIAILVLGVFAISCGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFVDEN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  +G+D+   + L+  +  D +KI+++ L A  R   L S ++DI+  N   T  R   
Sbjct: 61  GKNQGYDIYLAKRLAKDLLGDENKIEFITLEAANRVEYLLSNKVDIILANFTVTDER--K 118

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +  +   I  V +L G  + V  GTT E+     F  ++     
Sbjct: 119 QKVDFAKPYMKVSLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEIY----FTKNHPDIEL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + +++  E   A    R  A   D + ++A     + P   V +  +  +  +APA+ +G
Sbjct: 175 LKYDQNTETFNALLDKRGAALAHDNTLVFAWAT--ENPGFVVDIKQLGEQDYIAPAVRKG 232

Query: 234 DTEWYNIVSWTHYAMV 249
           + E  + ++    A+ 
Sbjct: 233 NKELLDWLNTEIDALT 248


>gi|323527327|ref|YP_004229480.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323384329|gb|ADX56420.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 297

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 7/260 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + +A  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F      A+   +     K++ +P+ ++ R   +Q+  +D+   +T     R     
Sbjct: 61  SQEFALKVVDAVKQKLNAPNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF    +  G   +  K  GI   + L G ++   AGTT+E  L    +  NM  + I 
Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  ++ P + VI+    S       + + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E+  +V      + T+ E  
Sbjct: 239 EFKKVVDEAIAKVETSGEAD 258


>gi|221069701|ref|ZP_03545806.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|220714724|gb|EED70092.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
          Length = 293

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 96/256 (37%), Gaps = 7/256 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               ++LC  +      + +A  L  ++  G +        V F+ +  NG   G  V+ 
Sbjct: 2   QLHSTVLCAALGLGFLGAAHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEL 60

Query: 64  CRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            +A++ A+         ++++  + ++ R   L +  ID+   +T    +R   +G  F 
Sbjct: 61  SQAVAEAVKKVLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVG--FA 118

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              ++ G   ++ K  GI + + L G +  +  GTT    L           + ++ +  
Sbjct: 119 INHFYTGTRLLVKKSSGIQNYADLKGKTASITTGTTNLQVLRKANAEQGWGMNIVMAKDH 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R  A+  D   LY L      P +  ++ D +   P A  + + D ++  
Sbjct: 179 ADGFLLVENDRAAAFGMDDILLYGLIANAKNPKDFHVVADALQVEPYACMLRKDDPQFKQ 238

Query: 240 IVSWTHYAMVTAEELG 255
           +V      M+ +    
Sbjct: 239 LVDGVIGDMMKSGAFA 254


>gi|307246618|ref|ZP_07528689.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306852490|gb|EFM84724.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 298

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 21  MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 81  VDANGKNQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   I+ + QL G ++ V  GTT +      F  ++ 
Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 253 VQKGNQALLDVINK 266


>gi|170703105|ref|ZP_02893924.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170131984|gb|EDT00493.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 297

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 94/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F   +  A+         +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SREFQMKIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GDT
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|307730962|ref|YP_003908186.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307585497|gb|ADN58895.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 297

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 7/260 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + +A  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F      A+   +     K++ +P+ ++ R   +Q+  +D+   +T     R     
Sbjct: 61  SQEFALKVVEAVKQKLNAPNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF    +  G   +  K  GI   + L G ++   AGTT+E  L    +  NM  + I 
Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  ++ P + VI+    S       + + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E+  +V      + T+ E  
Sbjct: 239 EFKKVVDDAIAKLETSGEAD 258


>gi|330501772|ref|YP_004378641.1| extracellular solute-binding protein family 3 [Pseudomonas
           mendocina NK-01]
 gi|328916058|gb|AEB56889.1| extracellular solute-binding protein family 3 [Pseudomonas
           mendocina NK-01]
          Length = 299

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 98/259 (37%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +   +++      S     L  I + G +  G   G V F+         G+ 
Sbjct: 1   MKK-ILAASSMMLMFAAAGVSAQEGTLAKIAELGEISVGHRDGAVPFSYYDDQQRPVGYA 59

Query: 61  VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +D C  +  AI     +    + YLP+    R   L +  ID+    T     R+    +
Sbjct: 60  MDLCAKVVEAIKLKLDEPDLKVSYLPVTGATRMPLLANGTIDMECGTTTNNAERQR--QV 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +F    +  G   +  K   + +++   G ++   AGTT+   +++   A N+  + +  
Sbjct: 118 SFSNTYFVAGVRILSKKNAPVETMADAKGKTVVTLAGTTSVKVISEINAAQNLGLNVLSV 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           + + E     +  R  A   D  ++     T+  P + ++  + +S  P    + +GD  
Sbjct: 178 KDLAEGMLTLQTERAVALIFDDVSIAGAAATSKNPDDFIMSAEPLSVEPYGIMLRRGDDA 237

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V+ T   +    E+ 
Sbjct: 238 FKELVNATLDELYATGEIN 256


>gi|254199128|ref|ZP_04905543.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei S13]
 gi|254261815|ref|ZP_04952869.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1710a]
 gi|169656958|gb|EDS88355.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei S13]
 gi|254220504|gb|EET09888.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1710a]
          Length = 363

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 67  MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 126

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 127 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 186

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  GI   + L G ++   AGTT+E  L +    + M    I 
Sbjct: 187 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 244

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 245 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 304

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 305 AFKKVVDDAIVQVEKSGE 322


>gi|325525013|gb|EGD02925.1| extracellular solute-binding protein [Burkholderia sp. TJI49]
          Length = 297

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F   +  A+         +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  GI     L G ++   AGTT+E  L        M  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGIKDFGDLKGKTVVTTAGTTSERLLRKMNNEKQMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAIAQVEKSGE 256


>gi|296134850|ref|YP_003642092.1| extracellular solute-binding protein family 3 [Thiomonas intermedia
           K12]
 gi|295794972|gb|ADG29762.1| extracellular solute-binding protein family 3 [Thiomonas intermedia
           K12]
          Length = 297

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 7/260 (2%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K  F ++IL    +     +     L  +K+   +  G     + F+ +  NG   G+
Sbjct: 1   MIKKLFGLTILAAAAMSCAQAAELTGTLKKVKETNSITVGYRESSIPFSYLDNNGKPIGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            ++ C  +  A+  D      K+ Y P+ +  R   L++  ID+   +T  ++ R+  + 
Sbjct: 61  AMELCGKVVDAVKADLKMPGLKVNYTPVTSSNRIPLLENGTIDLECGSTTNSVARQKQVA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F P  +       + K  GIS  +QL+G +I   +GTT    L  Y K  +M++  I 
Sbjct: 121 --FGPTYFVINVTAAVKKDSGISDFAQLAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIY 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D   L      +  P+ + ILP  + + P +  + + D 
Sbjct: 179 GKDHAESFLLMADGRAAAFVMDDILLAGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           ++  +V  T   ++ + E+ 
Sbjct: 239 QFKALVDKTIDGVMKSGEIN 258


>gi|307265619|ref|ZP_07547173.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306919417|gb|EFN49637.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 261

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 96/262 (36%), Gaps = 17/262 (6%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55
           M K     F    + L ++     +  A+ L  IK++G +  G +     +   K  G+ 
Sbjct: 1   MNKKTLFVFLTMTIILGLILSACGTKPANTLDKIKEKGVIVMGTSADFPPYEFHKVEGNK 60

Query: 56  --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GFDVD   A++  +      ++   ++ K    ALQ+ +ID++      T  R   
Sbjct: 61  DTIVGFDVDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMIVAGMTPTPERAK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  + Y   Q  ++     IS    L G ++ VQ GTT+E              + 
Sbjct: 117 -SVDFSDLYYNSQQVVVVKNDSPISKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               RV +     +  RCDA   + +   A            +       +  A A+ +G
Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLENTVANAYLKEYKDMKMVFMKEINTVDNGSAVAVAKG 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + E  NI++     +  + E  
Sbjct: 231 NKELVNIINEVIKELKASGEYD 252


>gi|93005165|ref|YP_579602.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
           K5]
 gi|92392843|gb|ABE74118.1| extracellular solute-binding protein, family 3 [Psychrobacter
           cryohalolentis K5]
          Length = 330

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 87/242 (35%), Gaps = 7/242 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFD 73
           + +     L  IK+ G +  G     + F+ +        G+  D       A+   +  
Sbjct: 46  ATANTNGTLDKIKESGTIVVGHRDSSIPFSYIADDPNQPIGYAHDLEMKVVEAVKQKLNM 105

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              KI+Y  + ++ R   +Q+  +D    +T     R+  +   F    +  G   +  K
Sbjct: 106 PDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQKQVA--FSNGFFEIGTRLLTKK 163

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI     L G ++   AGTT+E  + +Y     M  + I  +   E        R DA
Sbjct: 164 DSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADA 223

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L   K     P E VI+ +  S       + + D E+  +V      +  + E
Sbjct: 224 FMMDDVLLAGEKAKAKNPDEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGE 283

Query: 254 LG 255
           + 
Sbjct: 284 IN 285


>gi|260866803|ref|YP_003233205.1| periplasmic-binding component GltI [Escherichia coli O111:H- str.
           11128]
 gi|257763159|dbj|BAI34654.1| periplasmic-binding component GltI [Escherichia coli O111:H- str.
           11128]
 gi|323179868|gb|EFZ65425.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           1180]
          Length = 302

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 25  AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 85  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKS 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   + T+ E 
Sbjct: 203 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262

Query: 255 G 255
            
Sbjct: 263 E 263


>gi|237752493|ref|ZP_04582973.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter winghamensis ATCC BAA-430]
 gi|229375982|gb|EEO26073.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter winghamensis ATCC BAA-430]
          Length = 284

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 15/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M    F   L + +    +       ST+   L  IK++G +  G+ +    F  V   G
Sbjct: 10  MKNLIFKIFLAIFVAGIFAGCENNTQSTSEDRLAKIKQKGVITIGVFSDKPPFGFVNDKG 69

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFDV   R L+ ++  D SK+++  + A  R   L+S ++D++  N   T  R    
Sbjct: 70  ENDGFDVYVARELAKSLLGDASKVKFELVEAASRVEFLKSGKVDLIMANFTKTPERAEV- 128

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F         G +  K+  I  V+ L G  + V  GTT +      F  ++ +   +
Sbjct: 129 -VDFATPYMKVALGIVS-KEGAIKDVADLKGKKLIVNKGTTADFY----FTKNHPEIELV 182

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F++  E   A +  R DA   D   L+A     + P+  V +  + ++  +APA+ +GD
Sbjct: 183 KFDQNTEAFLALKDGRGDALAHDNLLLFAWA--KENPNFAVAISKLGNEDVIAPAVKKGD 240

Query: 235 TEWYNIVS 242
                 V+
Sbjct: 241 KALLEWVN 248


>gi|83312881|ref|YP_423145.1| amino acid ABC transporter periplasmic protein [Magnetospirillum
           magneticum AMB-1]
 gi|82947722|dbj|BAE52586.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magneticum AMB-1]
          Length = 302

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L ++     +     L  +K+ G +  G+       + +  +    G+ 
Sbjct: 1   MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYH 60

Query: 61  VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           VD CR    A+ + +     +++   + +K R   L    ID+   +T     R+  +  
Sbjct: 61  VDICRRVTEAVKAQLGLAALEVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVA- 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P TY       + K   I  +SQL G ++   AG+T+   L    +  ++K   +  
Sbjct: 120 -FAPTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQLLKARVQGRDIKVTELFG 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E      + +  A+  D + L  L  ++  P ++ ILP  ++  P+A  + +GD E
Sbjct: 179 NDHAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPE 238

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T  AM+ + E+G
Sbjct: 239 FKALVDRTVKAMMESGEVG 257


>gi|300692064|ref|YP_003753059.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           high affinity periplasmic solute-binding protein
           [Ralstonia solanacearum PSI07]
 gi|299079124|emb|CBJ51791.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           high affinity periplasmic solute-binding protein
           [Ralstonia solanacearum PSI07]
          Length = 303

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 97/250 (38%), Gaps = 9/250 (3%)

Query: 7   VSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            ++LC  +  F   T+ ++   +L  I+  G ++         F+   A+    G+ VD 
Sbjct: 11  AALLCSSLSIFAPGTALASATPVLDRIRDTGTVRIAHRESAAPFSYYDADKKPIGYAVDL 70

Query: 64  CRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C  +     + +     K+QY+ +    R   +   + D+    T     RE    +AF 
Sbjct: 71  CLRVVDKLRAELKRPDLKVQYVLVTPSTRIPTIMEGKADLECSTTTNN--RERREQVAFT 128

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G   ++    GI     L   ++ +  GTT+   +     +  +       +  
Sbjct: 129 IPHYIAGIRMLVKTSSGIHKWDDLRNKTVVLTKGTTSVTEMRKLNDSRVLHMKIEEVKEH 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E  A   + + DA+  D   LY+ +     P ++ ++ D+++  P A  + + D E+  
Sbjct: 189 AEAFAMVESGKADAFAMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKR 248

Query: 240 IVSWTHYAMV 249
           +V     A++
Sbjct: 249 VVDRAMTAII 258


>gi|222529920|ref|YP_002573802.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456767|gb|ACM61029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 266

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 95/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           MYK     V ++ L I F +  ++N      L  IKK      G++           N +
Sbjct: 1   MYKKVIALVLLIALFIPFLSGCTSNDQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD    ++  +    +K++ + ++      AL+SK+ D +      T  R+ +  
Sbjct: 61  TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           L       +  Q   + K    I S   L G  I VQA TT +  +    K  N +    
Sbjct: 118 L--AGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDNAVQKM-KFINYEKDVT 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +ER+ +        R  A   D   + A       P +  I P  + + P+  A+ + D
Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKED 232

Query: 235 TEWYNIVSWTH 245
            + YN +    
Sbjct: 233 KDLYNEIQKIL 243


>gi|251796879|ref|YP_003011610.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
 gi|247544505|gb|ACT01524.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
          Length = 282

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 31/277 (11%)

Query: 1   MYKDFFVSILCLIILFFTS--------------------FSTNASILGDIKKRGFLKCGI 40
           M K  ++++   +    T+                     S +AS L  IK RG L  G+
Sbjct: 1   MKKKSWMTLGIALTFLATALLAGCSSKEGGDGNGANGESASGSASALESIKNRGKLVVGV 60

Query: 41  NTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
                 F      +G  +GFDVD  +AL+  I  D +KI+   + +K R   L +  ID+
Sbjct: 61  KYDTKLFGLKDPASGSVEGFDVDIAKALAKEILGDETKIELKEVTSKTRIPMLNNNDIDM 120

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTEL 158
           +      T  R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+  
Sbjct: 121 IVATMTITEERKK--EVDFSDVYFKAGQSLLVKKGSPIKSIDDIKKGTKVLAVKGSTSVD 178

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +    KA       + F+  ++  +A +A + D  T D + LY + + +     + ++ 
Sbjct: 179 NI----KAKAPDATILEFDNYQDAFSALKAGQGDTLTTDNAILYGMAVQDPN---YEVVG 231

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +  +  P   AI +G T+  N V+     +    E  
Sbjct: 232 EPFTDEPYGIAIKKGATDLLNSVNAGLKKLHDNGEYD 268


>gi|188534469|ref|YP_001908266.1| glutamate and aspartate transporter subunit [Erwinia tasmaniensis
           Et1/99]
 gi|188029511|emb|CAO97388.1| Glutamate/aspartate periplasmic-binding protein [Erwinia
           tasmaniensis Et1/99]
          Length = 309

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 93/270 (34%), Gaps = 20/270 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST-------------NASILGDIKKRGFLKCGINTGLVGF 47
           M        L L                         S L  I K G +  G     V F
Sbjct: 1   MKFRKLGLCLALASAASGIAHADDTKVQAVADAQQQNSTLEKIAKTGVIVVGHRESSVPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103
           +         G+  D+  A+ +AI         +++ LP+ ++ R   LQ+   D    +
Sbjct: 61  SYYDNQQKVVGYSQDYSNAIVAAIKTKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T   L R+     +F    +  G   ++ K   I   + L G ++ V +GTT+E+ L   
Sbjct: 121 TTNNLERQK--QASFSNSIFVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKL 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                M    I  +   +      + R  A+  D + L   +    +PS+  IL    S 
Sbjct: 179 NDEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSDWEILGTPQSH 238

Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252
                 + +GD E+  ++  T   A  + E
Sbjct: 239 EAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268


>gi|149926670|ref|ZP_01914930.1| putative ABC transporter, glutamate receptor [Limnobacter sp.
           MED105]
 gi|149824599|gb|EDM83815.1| putative ABC transporter, glutamate receptor [Limnobacter sp.
           MED105]
          Length = 299

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQY 80
             L  I +   +  G     V F+ +  N    G+ +D C     A+ + +      +Q 
Sbjct: 28  GTLKKITETKTIVVGYRESSVPFSYLDNNQKPIGYHMDMCNKVVDAVKAKLKMPSLNVQL 87

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+ +  R   LQ+  ID+   +T  ++ R     ++F   T+      ++ K  GI S+
Sbjct: 88  QPVTSANRIPLLQNGTIDMECGSTTNSVAR--QEQVSFANSTFITSVKIVVKKNSGIKSL 145

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L G  I   +GTT+   +    K  N+ +  I  +   E        R  A+  D   
Sbjct: 146 ADLDGQPIATTSGTTSVQLIKQNEKGANINFKEIYGKDHAESFLLVANDRAKAFVMDDIL 205

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +  L   +  P E + LP+I+   P    + + D ++  ++  T   M+ + E  
Sbjct: 206 IAGLVAQSKNPDEFMFLPEILRTEPYGIMLRKDDPQFKALLDETVNGMIKSGEAE 260


>gi|261379487|ref|ZP_05984060.1| CjaA protein [Neisseria subflava NJ9703]
 gi|284797947|gb|EFC53294.1| CjaA protein [Neisseria subflava NJ9703]
          Length = 284

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           +K    S    + L              S+ A+ +  IK++G ++ G+      F  V A
Sbjct: 7   FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R  
Sbjct: 67  NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPER-- 124

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +  + F         G +  K K I+ V+QL   ++ V  GTT +     +F  ++ +  
Sbjct: 125 TEAVDFADPYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----FFTKNHPEVK 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F++  E   A +  R  A   D + L+A     + P+  V + ++     +APA+ +
Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQK 238

Query: 233 GDTEWYNIVSWTHYAM 248
           G+T+  N V+    AM
Sbjct: 239 GNTDLLNWVNGEIAAM 254


>gi|292487616|ref|YP_003530488.1| putative glutamate/aspartate ABC transporter periplasmic protein
           [Erwinia amylovora CFBP1430]
 gi|292898854|ref|YP_003538223.1| glutamate/aspartate ABC transporter substrate-binding protein
           [Erwinia amylovora ATCC 49946]
 gi|291198702|emb|CBJ45811.1| glutamate/aspartate ABC transporter, substrate-binding protein
           [Erwinia amylovora ATCC 49946]
 gi|291553035|emb|CBA20080.1| putative glutamate/aspartate ABC transport system, periplasmic
           component [Erwinia amylovora CFBP1430]
          Length = 309

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 20/270 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGLVGF 47
           M  +   + +    I    + + +A              L  I K G +  G     V F
Sbjct: 1   MKFRKLGLCLALAGIASGIAHAEDAKAPATADAQQQTHTLEKIAKNGVIVVGHRESSVPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103
           +         G+  D+  A+ +AI         +++ LP+ ++ R   LQ+   D    +
Sbjct: 61  SYYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T   + R+     +F    +  G   ++ K   I   + L G ++ V +GTT+E+ L   
Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGSAIKDFADLKGKTVVVTSGTTSEILLNKL 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                M    +  +   +      + R  A+  D + L   +    +PSE  IL    S+
Sbjct: 179 NDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSR 238

Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252
                 + +GD+E+  ++  T   A  + E
Sbjct: 239 EAYGCMLRKGDSEFKKLMDDTIVQAQTSGE 268


>gi|300823028|ref|ZP_07103162.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 119-7]
 gi|300920529|ref|ZP_07136955.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 115-1]
 gi|331676315|ref|ZP_08377027.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           H591]
 gi|300412468|gb|EFJ95778.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 115-1]
 gi|300524377|gb|EFK45446.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 119-7]
 gi|331076373|gb|EGI47655.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           H591]
          Length = 327

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 50  AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 109

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 110 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 167

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 168 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 227

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   + T+ E 
Sbjct: 228 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 287

Query: 255 G 255
            
Sbjct: 288 E 288


>gi|301155146|emb|CBW14610.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 285

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGF 47
           M K F    ++     L F   + N            S L  I+K G ++ G+ +    F
Sbjct: 1   MKKTFKTLTALFATATLAFGLTACNDKEPAKDGAKTVSSLEQIQKDGKVRIGVFSDKPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             V A G  +GFDV+  +A+   +  D +K++++ ++A  R   L SK++DI+  N   T
Sbjct: 61  GYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVDAANRAEYLLSKKVDIILANFTVT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+    + F         G +      I+ + QL G ++ V  GTT ++    +F  +
Sbjct: 121 PARKEV--VDFANPYMKVALGVVSKDGSVITDLEQLKGKTLIVDKGTTADI----FFTKN 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + FE+  E   A R  R DA + D + L+A       P   V + +   +  +A
Sbjct: 175 YPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAWAKQ--NPGYTVGVKNFGDQDVIA 232

Query: 228 PAIIQGDTEWYNIVSWTHY 246
           PA+ +   E  N ++    
Sbjct: 233 PAVRKDAPELLNWLNNEIQ 251


>gi|171315678|ref|ZP_02904912.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171099210|gb|EDT43983.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 298

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 87/251 (34%), Gaps = 8/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F    + L     ++    A    L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRFRWLAVALTCALASTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D       AL + +      ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+   + L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238

Query: 235 TEWYNIVSWTH 245
             + ++V    
Sbjct: 239 PAFKHVVDGVI 249


>gi|145298525|ref|YP_001141366.1| ABC-type amino acid transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851297|gb|ABO89618.1| ABC-type amino acid transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 260

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 92/249 (36%), Gaps = 17/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L  L   + +  AS L  +  RG L+ G + G   F      G + GFD
Sbjct: 1   MIKKLILSTLLLCGL--ANAAAPASTLDAVLDRGVLRVGFDAGYQPFEMTNKQGQYIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +      ++++         AL + + D++      T  R  +L + F  
Sbjct: 59  VDLAKMVAKEMGVK---VEFVNTAWDGIIPALLTDKFDVIMGGMTVTPQR--NLRVNFAD 113

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K     I S S L+       V+ GTT E  +             + F
Sbjct: 114 PYIVVGQTIVLRKDKAGEIKSFSDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQF 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E  ++        + DA+  D+         N     H  L    +  PLA AI +GD +
Sbjct: 170 ETQDDAKLEVINGKVDAFVYDLPYNAIFASQNTGAVVH--LDKPFTFEPLAWAIRKGDQD 227

Query: 237 WYNIVSWTH 245
             N  +   
Sbjct: 228 TLNWFNNYL 236


>gi|309780275|ref|ZP_07675026.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp.
           5_7_47FAA]
 gi|308920978|gb|EFP66624.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp.
           5_7_47FAA]
          Length = 301

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 6/256 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F   L  ++            L  I+    +  G+    + F+   +  +  GF  D 
Sbjct: 9   RTFPLALASLLAIGAHAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADL 68

Query: 64  C----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C     A+          I+++P+ ++ R   +Q+  +D+    T     RE     AF 
Sbjct: 69  CSRVIDAVKKKTGKPNLDIKHIPVTSQNRTSLVQNGSVDLECGVTTHLKSRE--QQTAFS 126

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  G   + + K G+     L+G S+   AGTT+E  L        M  + I  +  
Sbjct: 127 TTFFIAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDY 186

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E     ++ R  A+  D   L   +    +P + V+     S       + + D ++  
Sbjct: 187 GESFLTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKK 246

Query: 240 IVSWTHYAMVTAEELG 255
           +V  T   ++ + E+ 
Sbjct: 247 LVDDTMTGVMKSGEIK 262


>gi|66047135|ref|YP_236976.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257842|gb|AAY38938.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 333

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
               + +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 35  HLLGAAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSH 94

Query: 62  DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 95  DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 152

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 153 FSIGIFEVGTRLLSKKNSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 212

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + L        +P +  +     S       + +GD  +
Sbjct: 213 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 272

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + E+ 
Sbjct: 273 KKAVDDAIVATYKSGEIN 290


>gi|157160143|ref|YP_001457461.1| glutamate and aspartate transporter subunit [Escherichia coli HS]
 gi|260853906|ref|YP_003227797.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str.
           11368]
 gi|312970730|ref|ZP_07784911.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           1827-70]
 gi|331667009|ref|ZP_08367883.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA271]
 gi|157065823|gb|ABV05078.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           HS]
 gi|257752555|dbj|BAI24057.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str.
           11368]
 gi|310337379|gb|EFQ02517.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           1827-70]
 gi|320198220|gb|EFW72824.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli EC4100B]
 gi|323153620|gb|EFZ39868.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           EPECa14]
 gi|331066233|gb|EGI38117.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA271]
          Length = 302

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 25  AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 85  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   + T+ E 
Sbjct: 203 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262

Query: 255 G 255
            
Sbjct: 263 E 263


>gi|193069104|ref|ZP_03050062.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           E110019]
 gi|218694095|ref|YP_002401762.1| glutamate and aspartate transporter subunit [Escherichia coli
           55989]
 gi|192957648|gb|EDV88093.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           E110019]
 gi|218350827|emb|CAU96521.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli 55989]
 gi|324116729|gb|EGC10644.1| extracellular solute-binding protein 3 [Escherichia coli E1167]
          Length = 302

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 25  AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 85  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   + T+ E 
Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262

Query: 255 G 255
            
Sbjct: 263 E 263


>gi|311280448|ref|YP_003942679.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308749643|gb|ADO49395.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 303

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 15/265 (5%)

Query: 4   DFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
                   ++++  ++          +   S L  I K G +  G     V F+      
Sbjct: 2   QLRKLAAAMLVMGMSAGLAHADDAAPAAGQSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ 61

Query: 55  DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+  D+  A+  A+         +I+ LP+ ++ R   LQ+   D    +T   L R
Sbjct: 62  KVVGYSQDYSNAIVEAVKKKLNKPDLQIKLLPVTSQNRIPLLQNGTFDFECGSTTNNLER 121

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                 +F    +  G   ++ K   I     L   ++ V +GTT+E+ L        M 
Sbjct: 122 --QQQASFSDTIFVIGTRLLVKKGSPIKDFPDLKDKTVVVTSGTTSEVLLHKLNDEKQMN 179

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   +      + R  A+  D + L   +    +P + VI+    SK      +
Sbjct: 180 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDDWVIVGTPQSKEAYGCML 239

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255
            + D E+  ++  T     T+ E  
Sbjct: 240 RKNDPEFKKLMDDTISQAQTSGEAE 264


>gi|115350618|ref|YP_772457.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115280606|gb|ABI86123.1| L-aspartate-binding protein / L-glutamate-binding protein
           [Burkholderia ambifaria AMMD]
          Length = 297

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 94/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F   +  A+         +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GDT
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|242309235|ref|ZP_04808390.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter pullorum MIT 98-5489]
 gi|239524276|gb|EEQ64142.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter pullorum MIT 98-5489]
          Length = 273

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 107/254 (42%), Gaps = 13/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K  F+  L ++ L+F         + + L  IK++G +  G+ +    F  +  +G  
Sbjct: 1   MRKILFIMFLGILSLWFVGCGQTQTNSNNTLEAIKQKGVVTIGVFSDKPPFGFINKDGKN 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDV   + ++  +  D +K+++  + A  R   L+S ++DI+  N   T  RE    +
Sbjct: 61  DGFDVYLSKQIAKDLLGDENKVKFELVEAASRVEFLKSGKVDIIMANFTKTPEREAV--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F         G +  K   I ++  L G  + V  GTT +      F  ++ +   + +
Sbjct: 119 DFAAPYMKVALGVVS-KNGEIKTIEDLKGKKLIVNKGTTADFY----FSKNHPEIELLKY 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  E   A +  R  A   D   ++A     + P   V +  + ++  +APA+ +GD E
Sbjct: 174 DQNTESFLALKDGRGVALAHDNLLVFAWA--KENPGFEVGITKMGNEDVIAPAVKKGDKE 231

Query: 237 WYNIVSWTHYAMVT 250
               ++     +  
Sbjct: 232 LLEWLNQEIQTLTE 245


>gi|302876277|ref|YP_003844910.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|307687009|ref|ZP_07629455.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|302579134|gb|ADL53146.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
          Length = 282

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 15/253 (5%)

Query: 1   MYKDF-----FVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K F       +++  I +     S  +  S +  IKK G +K G+ +    F  V   
Sbjct: 1   MKKRFKVASILTTLVIAIGVLAGCSSKTSKESSIETIKKNGVIKIGVFSDKPPFGYVDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ +GFDV   R  +  +  D SK+Q++ + A  R   L++ ++D++  N   T  R+  
Sbjct: 61  GNNQGFDVYIARRFAKDLLGDESKVQFVLVEAASRVEYLETGKVDVILANFTVTDERKE- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +  +   I++V QL G  + V  GTT E      F  +      
Sbjct: 120 -KVDFANPYMKVALGVVSPEGDKITNVDQLKGKKLIVNKGTTAETY----FTKNYPNIEL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + +++  E   A +  R  A   D + L+A     +       +  + S   +APA+ +G
Sbjct: 175 LKYDQNTEAFQALKDGRGSALAHDNTLLFAWA--RENKGFTTGVESLGSLDTIAPAVQKG 232

Query: 234 DTEWYNIVSWTHY 246
           + E  N ++    
Sbjct: 233 NVELLNWINDELT 245


>gi|17544803|ref|NP_518205.1| amino-acid-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427092|emb|CAD13612.1| probable amino-acid-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 301

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 89/253 (35%), Gaps = 8/253 (3%)

Query: 7   VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           +++   I          A    L  I+    +  G+    + F+   +     GF  D C
Sbjct: 10  LALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLC 69

Query: 65  ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                A+   +     ++Q +P+ ++ R   +Q+  +D+    T     RE     AF  
Sbjct: 70  SRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFST 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +     G+     L+G S+   AGTT+E  L        M  + I  +   
Sbjct: 128 TFFIAATRLLTSTHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYG 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E     ++ R  A+  D   L   +    +P++ V+     S       + + D ++  +
Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKDDPQFKKL 247

Query: 241 VSWTHYAMVTAEE 253
           V  T   ++   E
Sbjct: 248 VDDTLTGVMKRGE 260


>gi|134294747|ref|YP_001118482.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134137904|gb|ABO53647.1| L-aspartate-binding protein / L-glutamate-binding protein
           [Burkholderia vietnamiensis G4]
          Length = 297

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  +   + I  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYQKAVLMIAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 61  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +    I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMSIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDEAISQVEKSGE 256


>gi|257092714|ref|YP_003166355.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045238|gb|ACV34426.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 301

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 11/264 (4%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M+K    F ++      L     +       L  IK  G +  G     + F+       
Sbjct: 1   MFKVSRRFAIAATLSAALLSAPVAAQELTGTLKKIKDTGVITLGHRESSIPFSYYDDKQQ 60

Query: 56  WKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+  +       A+ + +      ++ +P+ +  R   +Q+  +D+   +T     R+
Sbjct: 61  VIGYSHEMMLKAVEAIKADLKLAKLDVKLMPVTSANRITLVQNGSVDLECGSTTNNTERQ 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               ++F    +  G   +     GI+    L+G ++   AGTT+E  L    +   MK 
Sbjct: 121 K--QVSFSNSIFIIGTRLMTKTNSGINDFPDLAGKNVVTTAGTTSERLLRKMNEDKQMKM 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + I  +   E        R  A+  D + LY       + S+ V++    S       + 
Sbjct: 179 NVISAKDHGESFLTLETGRAVAFMMDDALLYGEMAKAKKASDWVVVGTPQSYEAYGCMLR 238

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D  +  +V       +T+ E  
Sbjct: 239 KDDPAFKKVVDGALAKAMTSGEAE 262


>gi|171060694|ref|YP_001793043.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6]
 gi|170778139|gb|ACB36278.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii
           SP-6]
          Length = 298

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 109/259 (42%), Gaps = 9/259 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V      ++   +    +  L  IK    +  G+       +    +G + G+ 
Sbjct: 1   MKKTLLVF---AALMAMGAAQAQSDTLKKIKDSASVTMGVRESSGALSLTLGDGKYVGYH 57

Query: 61  VDFC-RALS---SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           V+ C RAL+     +      I+Y  + ++ R   +Q+  +DI   +T     R+    +
Sbjct: 58  VELCQRALADVQKLLGLPKLDIKYQAVTSQNRIPLVQNGTVDIECGSTTNNAARQK--DV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +F   TY +     +    GI+S++QL G S+    GTT+   L  + +A+ + ++ +  
Sbjct: 116 SFAVTTYVEEVRIAVKGSSGITSIAQLGGKSVATTTGTTSVQLLRKHERANGVNFNEVFG 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R DA+  D   L      +  P++  I+ +++S  P+A  + + D  
Sbjct: 176 KDHADSFLLLESGRADAFVMDGQILAGNIAKSKAPADFKIVGEVLSVEPIAIMMRKDDPA 235

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +   +  +  AM+ + E+ 
Sbjct: 236 FKKAIDASLTAMMKSGEIA 254


>gi|320178445|gb|EFW53413.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella boydii ATCC 9905]
          Length = 302

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 25  AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 85  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQTQAA--FSDTIFVVGTRLLTKKG 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   M T+ E 
Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGEA 262

Query: 255 G 255
            
Sbjct: 263 E 263


>gi|303253108|ref|ZP_07339257.1| putative ABC transporter, periplasmic binding protein
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302647790|gb|EFL77997.1| putative ABC transporter, periplasmic binding protein
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 278

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 19/256 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 1   MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 61  VDANGKSQGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   I+ + QL G ++ V  GTT +      F  ++ 
Sbjct: 121 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+    ++++   
Sbjct: 233 VQKGNQALLDVINKKI 248


>gi|157146734|ref|YP_001454053.1| glutamate and aspartate transporter subunit [Citrobacter koseri
           ATCC BAA-895]
 gi|157083939|gb|ABV13617.1| hypothetical protein CKO_02507 [Citrobacter koseri ATCC BAA-895]
          Length = 317

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + + +      S L  I K G +  G     V F+         
Sbjct: 19  RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGIIVVGHRESSVPFSYYDNQQKVV 78

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   + R+  
Sbjct: 79  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 138

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 139 AA--FSDTIFIVGTRLLAKKDSDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMNMRI 196

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 197 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 256

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  +V  T   + T+ E  
Sbjct: 257 DPEFKTLVDDTIAQVQTSGEAE 278


>gi|258405418|ref|YP_003198160.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257797645|gb|ACV68582.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 263

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 81/251 (32%), Gaps = 11/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L +    +          ++K+G L  G++         K +G   GFD
Sbjct: 1   MKKAILFVSALLCLCVAATGFAGDGSWERVQKKGELVIGLDDTFAPMGFRKDDGTLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +  D   I + P        +L +K+ D +      T  R     + F  
Sbjct: 61  VDAAEALGERLGID---IAWQPTAWDGVIHSLNAKKFDCIWNGMTITEERAA--KVDFTE 115

Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               D     +  +   ++  + L G ++ VQ G++    + D  KA         +   
Sbjct: 116 PYIMDGQIVVVQFENDAVTDFADLGGTTVGVQKGSSAVEAVEDLPKA---PETVKEYPSN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                   A R  A   D   +        RP    +LP  ++K P   A  + D     
Sbjct: 173 NNALLDLEAGRLAAVIVDN--VAGRYAIATRPGTFKVLPGFVTKEPFGIAFRKADDSLRM 230

Query: 240 IVSWTHYAMVT 250
            V     AMV 
Sbjct: 231 KVQQALDAMVE 241


>gi|161525883|ref|YP_001580895.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189349395|ref|YP_001945023.1| polar amino acid transporter substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221202318|ref|ZP_03575352.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2M]
 gi|221209132|ref|ZP_03582126.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2]
 gi|160343312|gb|ABX16398.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189333417|dbj|BAG42487.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221171036|gb|EEE03489.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2]
 gi|221177892|gb|EEE10305.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2M]
          Length = 297

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +       A+   +     +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        M  + I 
Sbjct: 119 AAFSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDP 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           E+  +V      +  + E
Sbjct: 239 EFKKVVDDAIAQVEKSGE 256


>gi|290476187|ref|YP_003469087.1| glutamate/aspartate ABC transporter periplasmic binding protein
           [Xenorhabdus bovienii SS-2004]
 gi|289175520|emb|CBJ82323.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus bovienii SS-2004]
          Length = 295

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +           L  IK  G +  G     V F+      +  G+ 
Sbjct: 1   MRKLMLTMML-LSAVGAAHAEELTGTLKKIKDNGIIVVGHRESSVPFSYYDNQQNVVGYA 59

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+   +  A+         +++ +P+ ++ R   LQ+   D    +T   L R+     
Sbjct: 60  QDYSNLIVDAVKKKLDMPNLQVKLIPITSQNRIPLLQNGTYDFECGSTTNNLERQKQAA- 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   + +K  GI     L+G  + V +GTT+E+ L        M+   I  
Sbjct: 119 -FSNTIFVVGTRLLTNKDSGIKGFDDLAGKHVVVTSGTTSEILLNKLNDEKQMQMRIISA 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +    +P + VI+    S+      + + D +
Sbjct: 178 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWVIVGKPQSEEAYGCMLRKDDPQ 237

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  ++  T   + T+ E  
Sbjct: 238 FKKLIDGTIVKVQTSGEAE 256


>gi|222099043|ref|YP_002533611.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermotoga neapolitana DSM 4359]
 gi|221571433|gb|ACM22245.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermotoga neapolitana DSM 4359]
          Length = 246

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 103/247 (41%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V +L + ++ F+        + +IK RG+L  G++     F  V  NG+  GFD
Sbjct: 1   MRRLIAVLVLAISMVAFSGA------IEEIKSRGYLLVGLSADFPPFEFVDENGNIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  +   ++ + +       +L +K+ID++      T  R+  +   F  
Sbjct: 55  VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  GQ  ++ K       +   L G ++ VQ GTT ++ ++ Y        + + F++
Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGINVVRFDK 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D       +    +  + VI  D++S      A+ + DT+  
Sbjct: 165 FTDAFLELKRKRADAVVLD---SATARAFVSKNPDIVISSDVLSSEQYGIAVRKEDTDLL 221

Query: 239 NIVSWTH 245
             ++   
Sbjct: 222 EFINGVL 228


>gi|311107045|ref|YP_003979898.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter
           xylosoxidans A8]
 gi|310761734|gb|ADP17183.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter
           xylosoxidans A8]
          Length = 302

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 8/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      S+  L I    + S       L  +   G +  G     + F+    N    G
Sbjct: 1   MALRIKASVAALAIFMAGAASAQQLDGTLKKVADTGTITIGHRETSIPFSYYDGNQKPVG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +D C    RA+ + +     +++YLP+ +  R   + +  ID+   +T  TL  +   
Sbjct: 61  YSIDICERIVRAVQTRLKRSDIQVKYLPVTSATRIPLMGNGTIDLECASTSNTL--DRQQ 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF   T+  G  F+  K   + +V  L G  +   +GT     + +  +   +    +
Sbjct: 119 QVAFSVTTFVTGNRFLSQKSSKLRTVDDLKGKVVASTSGTANIRQINELNETRGLGMRIV 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY L     +P  + +    +S  P A  + + D
Sbjct: 179 PVKEHAEGFLMVETGRAAAFVMDDILLYGLIANAKQPDRYEVSDASLSIEPYAIMLRRDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            ++  +V     A+  + E  
Sbjct: 239 PQFKALVDDAIKALYASGEFQ 259


>gi|319761413|ref|YP_004125350.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|317115974|gb|ADU98462.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
          Length = 299

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 7/253 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + + ++    ++ +     L  IK  G +  G+       A    +G + GF 
Sbjct: 1   MKKHLLAAAITVLA-AGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFH 59

Query: 61  VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    ++      +     +I+Y P+ ++ R   + +  +D+   +T   L R+  +  
Sbjct: 60  TEMAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVA- 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +     +    GIS +  L+G +I    GTT+  TL    +A  M +  ++ 
Sbjct: 119 -FANTTYVEEVRIAVKANSGISDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMG 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D S L      +  P++  I+ + +S  P+A  + + D  
Sbjct: 178 KDHADSFLMLETGRADAFIMDGSILAGNISKSKNPNDFKIVGEALSVEPIACMLRKDDPA 237

Query: 237 WYNIVSWTHYAMV 249
           +   V  +  A +
Sbjct: 238 FKKAVDESIVAQI 250


>gi|182419546|ref|ZP_02950794.1| glutamine-binding protein [Clostridium butyricum 5521]
 gi|237668292|ref|ZP_04528276.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182376581|gb|EDT74156.1| glutamine-binding protein [Clostridium butyricum 5521]
 gi|237656640|gb|EEP54196.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 279

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 103/277 (37%), Gaps = 29/277 (10%)

Query: 1   MY-KDFFVSILCLIILFFTSF--------------------STNASILGDIKKRGFLKCG 39
           M  K   ++      +  T                      S   + +  IK  G LK G
Sbjct: 1   MKLKRLIIAFGLGACILMTGCGSSSSTSQSQGTDTSSKASSSAEGADIQKIKDNGVLKVG 60

Query: 40  INTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           +   +  F     + G+ +GF+VD  + ++  I  D +KI+   + AK R   L + +ID
Sbjct: 61  VKVDVPKFGYKNPDTGEIEGFEVDLSKQIAKKILGDENKIELQGVTAKTRGPLLDNGEID 120

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
           +++     T  R+      F      DG G ++ K  G +S+  L+G +I V   +TT+ 
Sbjct: 121 MVAATFTITDERKK--SYNFSDPYLTDGVGLLVKKDAGYTSLKDLNGKTIGVAQSSTTKK 178

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            L +      +      F    EI AA  + R D +  D S L             VIL 
Sbjct: 179 ALEEEAANQGISLKFSEFGSYPEIKAALDSKRVDCFAVDASILNGYV-----DDNSVILD 233

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D  +      A    + E   +++     M T+ E+ 
Sbjct: 234 DRYNPQEYGIASKLDNKELAKVINEVVNDMKTSGEMD 270


>gi|330837353|ref|YP_004411994.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329749256|gb|AEC02612.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 269

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 18/265 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K     ++ L+ +   S S            ++ +  IK RG L  G+   + GF   
Sbjct: 1   MKKKCISGLVMLLCVMLVSTSVLFAAGSKESGASNEVDKIKSRGVLNVGVKVDVPGFGYK 60

Query: 51  K-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
             + G   GF+ D  R ++  I  D SK+ + P+ AK R   L + ++DI+      T  
Sbjct: 61  DISTGANVGFETDLARQIAKVILGDASKVSFTPVTAKTRGPLLDTGELDIVIATFTVTEE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+  L   F  I Y D    ++ K  G  S+  L G +I V    TT+  L    K   +
Sbjct: 121 RK--LSYEFSTIYYTDAVSLLVKKSGGYKSLKDLDGKTIGVAQSATTKAVLETEAKNQGI 178

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 +    E+  A  + R D+++ D + L      +       ILPD  S      A
Sbjct: 179 TLKFSEYASYPELKVALDSGRIDSFSVDRAILMGYVEDSS-----EILPDKYSPQEYGAA 233

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254
           + +G+    ++V+ T   +  + EL
Sbjct: 234 MKKGNLALLSVVNSTIADLDASGEL 258


>gi|170700094|ref|ZP_02891116.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170135008|gb|EDT03314.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 298

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 86/251 (34%), Gaps = 8/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F    + L      +    A    L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRFRWLAVALTCALAGTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D       AL + +      ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+   + L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238

Query: 235 TEWYNIVSWTH 245
             + ++V    
Sbjct: 239 PAFKHVVDGVI 249


>gi|257125151|ref|YP_003163265.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
 gi|257049090|gb|ACV38274.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
          Length = 282

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 18/259 (6%)

Query: 1   MYKDF-----FVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K+F      ++IL L +   +       S     +  IKK G ++ G+      F  V
Sbjct: 1   MKKNFERLVKIIAILVLGVFAISCGKGGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFV 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             NG  +G+D+   + L+  +  D +KI+++ L A  R   L S ++DI+  N   T  R
Sbjct: 61  DENGKNQGYDIYLAKRLAKDLLGDENKIEFVTLEAANRVEYLLSNKVDIILANFTVTDER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                + F         G +  +   I  V +L G  + V  GTT E+     F  +   
Sbjct: 121 --KQKVDFAKPYMKVSLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEIY----FTKNYPD 174

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              + +++  E   A    R  A   D + ++A     + P   V +  +  +  +APA+
Sbjct: 175 IELLKYDQNTETFNALLDKRGAALAHDNTLVFAWAT--ENPGFVVDIKQLGEQDYIAPAV 232

Query: 231 IQGDTEWYNIVSWTHYAMV 249
            +G+ E  + ++    A+ 
Sbjct: 233 RKGNKELLDWLNTEIDALT 251


>gi|312127064|ref|YP_003991938.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777083|gb|ADQ06569.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 266

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 14/251 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           MYK     V ++ L I F +  S+N    + L  IKK      G++           N +
Sbjct: 1   MYKKAIALVLLIALFIPFLSGCSSNEKNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD    ++  +    +K++ + ++      AL+SK+ D +      T  R+ +  
Sbjct: 61  TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117

Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           L       +  Q   + K    I S   L G  I VQA TT +  +    K  N +    
Sbjct: 118 L--AGPYLYIRQVIAVKKGDNSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVT 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +ER+ +        R  A   D   + A       P +  I P  + + P+  A+ + D
Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKED 232

Query: 235 TEWYNIVSWTH 245
            + YN +    
Sbjct: 233 KDLYNEIQKIL 243


>gi|4588485|gb|AAD26123.1| antigenic protein [Actinobacillus pleuropneumoniae]
          Length = 278

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 1   MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +     K++++   A  R   L+S ++D++  N   T  
Sbjct: 61  VDANGKSQGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K + IS + QL G ++ V  GTT +      F  ++ 
Sbjct: 121 RAEV--VDFAAPYMNVALGVVSPKVRLISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 233 VQKGNQALLDVINK 246


>gi|17545692|ref|NP_519094.1| amino-acid-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427986|emb|CAD14675.1| probable amino-acid-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 303

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 97/250 (38%), Gaps = 9/250 (3%)

Query: 7   VSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            ++LC  +  F+  +  AS    L  I+  G ++         F+   A+    G+ VD 
Sbjct: 11  AALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDL 70

Query: 64  CRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C  +   +  +      K+QY+ +    R   +Q  + D+    T     RE    +AF 
Sbjct: 71  CLRVVDKLRTELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNN--RERREQVAFT 128

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G   ++    GI     L   ++    GTT+   L     +  ++      +  
Sbjct: 129 IPHYIAGIRMLVKTASGIHRWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEH 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E  A   + + DA+  D   LY+ +     P ++ ++ D+++  P A  + + D ++  
Sbjct: 189 AEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKR 248

Query: 240 IVSWTHYAMV 249
           +V     A++
Sbjct: 249 MVDRAMTAII 258


>gi|78066952|ref|YP_369721.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77967697|gb|ABB09077.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 306

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 27/305 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    +   L      +    +  L  I++   +  G     V F+   ANG   GF  D
Sbjct: 13  RPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYADANGKVIGFSQD 72

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 73  LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 131 STTFFVATTRLLTRTNSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMRIISAKD 190

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  I+    S       + + D ++ 
Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFK 250

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY- 297
            +V                   +  + +   +    ++             GL+ D+   
Sbjct: 251 ALVDGVL---------------VQLMKRGEIDTLYDKWFTKPVPPK-----GLSFDFAMS 290

Query: 298 RIIRH 302
            +I+ 
Sbjct: 291 DVIKA 295


>gi|307248744|ref|ZP_07530757.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306854671|gb|EFM86861.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 298

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 19/256 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 21  MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 81  VDANGKSQGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   I+ + QL G ++ V  GTT +      F  ++ 
Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+    ++++   
Sbjct: 253 VQKGNQALLDVINKKI 268


>gi|299531139|ref|ZP_07044551.1| extracellular solute-binding protein [Comamonas testosteroni S44]
 gi|298720842|gb|EFI61787.1| extracellular solute-binding protein [Comamonas testosteroni S44]
          Length = 293

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 95/256 (37%), Gaps = 7/256 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               ++LC  +      + +A  L  ++  G +        V F+ +  NG   G  V+ 
Sbjct: 2   QLHSTVLCAALGLGFLGAVHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEL 60

Query: 64  CRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            + ++ A+         ++++  + ++ R   L +  ID+   +T    +R   +G  F 
Sbjct: 61  SQTVAEAVKKQLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVG--FA 118

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              ++ G   ++ K  GI S + L G +  +  GTT    L           + ++ +  
Sbjct: 119 INHFYTGTRLLVKKSSGIQSYADLKGKTAAITTGTTNLQVLRKANAEQGWGMNIVMAKDH 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R  A+  D   LY L      P +  ++ D +   P A  + + D ++  
Sbjct: 179 ADGFLLVENDRAAAFGMDDILLYGLIANAKNPRDFHVVADALQVEPYACMLRKDDPQFKQ 238

Query: 240 IVSWTHYAMVTAEELG 255
           +V      M+ +    
Sbjct: 239 LVDGVIGDMMKSGAFA 254


>gi|307703202|ref|ZP_07640148.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|307623277|gb|EFO02268.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 264

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 116 FTSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAMV 249
            + +        
Sbjct: 231 NDYLDSLVTKWT 242


>gi|293364951|ref|ZP_06611668.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|291316401|gb|EFE56837.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
          Length = 273

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 10  MKKKFFLSALLISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 70  GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 125 FTSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLDDSFKPSDYGIVTKKSNTEL 239

Query: 238 YNIVSWTHYAMV 249
            + +        
Sbjct: 240 NDYLDSLVTKWT 251


>gi|163734793|ref|ZP_02142231.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseobacter litoralis Och 149]
 gi|161391898|gb|EDQ16229.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseobacter litoralis Och 149]
          Length = 288

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 6/256 (2%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 + + L +    + +  +   L  I   G +  G     V F+ +  N +  G+ 
Sbjct: 4   KNTLLTAAVALGLSAPVAMADGHGGTLDKIAASGEIVIGHRESSVPFSYLDENQNPVGYS 63

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           +D C  +  A+    D    I+Y+P+N K R   + +  ID+   +T   L R     + 
Sbjct: 64  IDLCMKIVDAVAAELDQELTIKYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QQQVE 121

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           + P+T+  G   +  K  GI+SV+ L G ++ +  GTT E  +    +A  +    +   
Sbjct: 122 YLPVTFVTGTKILTRKDSGINSVADLDGMAVALAQGTTNERAVMAAVEAAGLDVKILPVR 181

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   +    R DAY  D   L+ L   +  P +  ++ D +S  P A  + + D+ +
Sbjct: 182 DHAEGMLSLETDRVDAYATDHILLHGLISKSKNPDDFAVVGDFLSFDPYALMVRRDDSAF 241

Query: 238 YNIVSWTHYAMVTAEE 253
             +       +    E
Sbjct: 242 ELVGKKALAEVFRTGE 257


>gi|295096601|emb|CBK85691.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 316

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 93/259 (35%), Gaps = 10/259 (3%)

Query: 3   KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    ++L + +      +       S L  I K G +  G     V F+         G
Sbjct: 19  RKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+   
Sbjct: 79  YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   +  K   I   + L G ++ V +GTT+E+ L        M    I
Sbjct: 139 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + L   +    +P    I+    SK      + +GD
Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKGD 256

Query: 235 TEWYNIVSWTHYAMVTAEE 253
            ++  ++  T     T+ E
Sbjct: 257 EDFKKLIDDTIAQAQTSGE 275


>gi|167564084|ref|ZP_02357000.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           oklahomensis EO147]
          Length = 297

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    +    G+
Sbjct: 1   MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 61  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  G+   + L G ++   AGTT+E  L +    + M  + I 
Sbjct: 121 --FSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 179 AKDHGDSFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 239 AFKKVVDDAIAQVEKSGE 256


>gi|241664919|ref|YP_002983279.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240866946|gb|ACS64607.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 301

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 91/252 (36%), Gaps = 8/252 (3%)

Query: 10  LCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC--- 64
           L L  L        A    L  I+    +  G+    + F+   +  +  GF  D C   
Sbjct: 13  LALTSLLAIGAQAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRV 72

Query: 65  -RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A+          I+ +P+ ++ R   +Q+  +D+    T     RE     AF    +
Sbjct: 73  IDAVKKKTGKPNLDIKQIPVTSQNRTSLVQNGSVDLECGVTTHLKSRE--QQTAFSTTFF 130

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G   + + K G+     L+G S+   AGTT+E  L        M  + I  +   E  
Sbjct: 131 IAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYGESF 190

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              ++ R  A+  D   L   +    +P + V+     S       + + D ++  +V  
Sbjct: 191 LTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKKLVDD 250

Query: 244 THYAMVTAEELG 255
           T   ++ + E+ 
Sbjct: 251 TMTGVMKSGEIK 262


>gi|167571226|ref|ZP_02364100.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           oklahomensis C6786]
          Length = 297

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    +    G+
Sbjct: 1   MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             DF   +  A+         +++ +P+ ++ R   +Q+  +DI   +T   L R+    
Sbjct: 61  SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  G+   + L G ++   AGTT+E  L +    + M  + I 
Sbjct: 121 --FSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +        R  A+  D + L   +    +P E VI+    S+      + + D 
Sbjct: 179 AKDHGDSFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      +  + E
Sbjct: 239 AFKKVVDDAIAQVEKSGE 256


>gi|187925335|ref|YP_001896977.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187716529|gb|ACD17753.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 297

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 97/260 (37%), Gaps = 7/260 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + +A  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F      A+   +     K++  P+ ++ R   +Q+  +D+   +T     R     
Sbjct: 61  SQEFALKVVEAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  GI   + L G ++   AGTT+E  L    +  +M  + I 
Sbjct: 119 AAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  ++ P + VI+    S       I + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E+  +V      + T+ E  
Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258


>gi|302872379|ref|YP_003841015.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575238|gb|ADL43029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 266

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 92/250 (36%), Gaps = 12/250 (4%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           MYK F   V ++   I   +  S+N      L  IKK      G++           N +
Sbjct: 1   MYKKFVVLVLLVAFFIPLLSGCSSNNQNMTTLEKIKKTKEFAVGMDNTFPPMEFADDNNN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD    ++  +    +K++ + ++      AL+SK+ D +      T  R+ +  
Sbjct: 61  TVGFDVDLANEIAKKLG---AKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           LA   +               I S   L G  I VQA TT +  +    K  N +     
Sbjct: 118 LAGPYLYIRQVIAV-KRGDSSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVTR 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +ER+ +        R  A   D   + A       P +  I P  + K P+  A+ + D 
Sbjct: 176 YERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAELEKEPVGIALRKEDK 233

Query: 236 EWYNIVSWTH 245
           E YN +    
Sbjct: 234 ELYNEIQKIL 243


>gi|206561695|ref|YP_002232460.1| periplasmic glutamate/aspartate-binding protein [Burkholderia
           cenocepacia J2315]
 gi|198037737|emb|CAR53681.1| periplasmic glutamate/aspartate-binding protein [Burkholderia
           cenocepacia J2315]
          Length = 297

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 94/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +++  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKFHKAVLTVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +       A+   +     +++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 61  SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|209520965|ref|ZP_03269702.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209498602|gb|EDZ98720.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 300

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 95/258 (36%), Gaps = 7/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       ++        +F+ +A S L  I++ G +  G     V F+ V +N    GF
Sbjct: 4   MNWSTVAVLVAATSASPGAFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDSNNQVIGF 63

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D C  +  A+         K++++P+ ++ R   +Q+  +D+    T     R+    
Sbjct: 64  SQDLCNKVIDAVKVKTKRPDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQS--Q 121

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +      +  K  GI     L+G ++    GTT+E  L    +   M    I 
Sbjct: 122 VTFGDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQIIS 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E      + R  AY  D   L   +    +PS+ +I     S       + + D 
Sbjct: 182 AKDYGEGRLTLESGRAVAYMMDDVLLAGTRTLTAKPSDWIITGTPQSSEAYGFMMRREDP 241

Query: 236 EWYNIVSWTHYAMVTAEE 253
           E+  +V  T    +   E
Sbjct: 242 EFRKLVDDTLEQTMKGPE 259


>gi|312792974|ref|YP_004025897.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180114|gb|ADQ40284.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 266

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           MYK     V ++ L I F +  S    N + L  IKK      G++           N +
Sbjct: 1   MYKKAIALVLLIALFIPFLSGCSLNNQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD    ++  +    +K++ + ++      AL+SK+ D +      T  R+ +  
Sbjct: 61  TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           L       +  Q   + K    I S   L G  I VQA TT +  +    K  N +    
Sbjct: 118 L--AGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVT 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +ER+ +        R  A   D   + A       P +  I P  + + P+  A+ + D
Sbjct: 175 RYERITDAFNDLNIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKED 232

Query: 235 TEWYNIVSWTH 245
            + YN +    
Sbjct: 233 KDLYNEIQKIL 243


>gi|186477321|ref|YP_001858791.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184193780|gb|ACC71745.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 297

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 98/258 (37%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + +A  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F      A+   +     K++  P+ ++ R   +Q+  +D+   +T     R     
Sbjct: 61  SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           ++F    +  G   +  K  G+   + L G ++   AGTT+E  L    +  NM  + I 
Sbjct: 119 VSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  ++ P + VI+    S       + + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           E+  +V      + T+ E
Sbjct: 239 EFKKVVDDAIAKVETSGE 256


>gi|296162982|ref|ZP_06845759.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295886776|gb|EFG66617.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 297

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 7/260 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + +A  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F      A+   +     K++  P+ ++ R   +Q+  +D+   +T     R     
Sbjct: 61  SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF    +  G   +  K  GI   + L G ++   AGTT+E  L    +  +M  + I 
Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  ++ P++ VI+    S       I + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPADFVIVGAPQSHEAYGCMIRKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E+  +V      + T+ E  
Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258


>gi|91785182|ref|YP_560388.1| ABC glutamate/aspartate transporter, periplasmic ligand binding
           protein [Burkholderia xenovorans LB400]
 gi|91689136|gb|ABE32336.1| L-glutamate-binding protein / L-aspartate-binding protein
           [Burkholderia xenovorans LB400]
          Length = 297

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 7/260 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + +A  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F      A+   +     K++  P+ ++ R   +Q+  +D+   +T     R     
Sbjct: 61  SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF    +  G   +  K  GI   + L G ++   AGTT+E  L    +  +M  + I 
Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  ++ P + VI+    S       I + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E+  +V      + T+ E  
Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258


>gi|167036205|ref|YP_001671436.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166862693|gb|ABZ01101.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 290

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 24/260 (9%)

Query: 1   MYKDFFVSILC-LIILFFTSFSTNASI-------------LGDIKKRGFLKCGINTGLVG 46
           M    F  +L  L  L   +    A               L  IK R  L  G+ T    
Sbjct: 1   MKTANFTKLLAPLFGLALLAGCNKADEPPKPAAASPATSYLETIKARDKLIVGVFTDKPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V   G + GFD D  R L+  +  D +K++++ +    R   LQS ++D++  N   
Sbjct: 61  FGFVDEKGRYVGFDTDIGRRLAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F           I+     +  +  L+  +I V  GTT ++ L      
Sbjct: 121 TPERKE--AVDFTNPNLRVAVQAIVADGSPVQKLDDLADKTIIVTTGTTADIWLT----K 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-P 225
           ++  +  + FE+  E   A    R DAY  D   L++    N     + +LP+++    P
Sbjct: 175 NHPDWKLLKFEKNSESLQALATGRGDAYAQDNLILFSWAKQNPG---YRVLPELLGDEAP 231

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           +APA+ +G+TE  + V+   
Sbjct: 232 IAPAVKKGNTELRDWVNAEL 251


>gi|53728918|ref|ZP_00134502.2| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209158|ref|YP_001054383.1| antigenic protein, ABC transporter-like protein [Actinobacillus
           pleuropneumoniae L20]
 gi|190151024|ref|YP_001969549.1| antigenic protein, ABC transporter-like protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307264383|ref|ZP_07545970.1| hypothetical protein appser13_17750 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097950|gb|ABN74778.1| antigenic protein, ABC transporter-like protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|189916155|gb|ACE62407.1| antigenic protein, ABC transporter-like protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306870270|gb|EFN02027.1| hypothetical protein appser13_17750 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 278

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 108/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 1   MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +     K++++   A  R   L+S ++D++  N   T  
Sbjct: 61  VDANGKSQGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   IS + QL G ++ V  GTT +      F  ++ 
Sbjct: 121 RAEV--VDFAAPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 233 VQKGNQALLDVINK 246


>gi|115358741|ref|YP_775879.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115284029|gb|ABI89545.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 298

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 86/251 (34%), Gaps = 8/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F    + L      +    A    L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRFRWLAVALTCALAGTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D       AL + +      ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+   + L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238

Query: 235 TEWYNIVSWTH 245
             + ++V    
Sbjct: 239 PAFKHVVDGVI 249


>gi|299068342|emb|CBJ39566.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum CMR15]
          Length = 301

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 90/255 (35%), Gaps = 8/255 (3%)

Query: 7   VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           +++   I          A    L  I+    +  G+    + F+   +     GF  D C
Sbjct: 10  LALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLC 69

Query: 65  R----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                A+   +     ++Q +P+ ++ R   +Q+  +D+    T     RE     AF  
Sbjct: 70  TRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFST 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +     G+     L+G S+   AGTT+E  L        M  + I  +   
Sbjct: 128 TFFIAATRLLTSVHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMSMNVISGKDYG 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E     ++ R  A+  D   L   +    +P++ V+     S       + + D ++  +
Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKL 247

Query: 241 VSWTHYAMVTAEELG 255
           V  T   ++   E+ 
Sbjct: 248 VDDTLTGVMKRGEIN 262


>gi|170731989|ref|YP_001763936.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169815231|gb|ACA89814.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 297

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +    L      +++     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +       A+   +     +++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 61  SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P + VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGDWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|187928559|ref|YP_001899046.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|187725449|gb|ACD26614.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
          Length = 297

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 6/256 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    S L +  L   +   +A  L  +   G +  G     V F+ + A     GF VD
Sbjct: 4   RHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGFSVD 63

Query: 63  FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
             +A+     + +     ++  +P+    R   L +   D+   +T  T  R   +   F
Sbjct: 64  LTQAIVDDVRARLKKPSLQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVA--F 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               ++ G   +  +  GI +   L+G ++   AG+T E  L  +   HN+    I  + 
Sbjct: 122 SINFFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNEKVLKKFAVEHNIDVQIISGKD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        R  A   D   LY L+  +  P+   ++ + +   P A  + + D  + 
Sbjct: 182 YADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAFK 241

Query: 239 NIVSWTHYAMVTAEEL 254
            +V  T   ++ + E 
Sbjct: 242 RLVDATITRLMKSGEF 257


>gi|330827244|ref|YP_004390547.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|329312616|gb|AEB87031.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 295

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 6/237 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78
            A  L  I   G +        V F+ +  +G   GF V+   A+  A+         K+
Sbjct: 22  QADTLKKIADTGKITVAYRESSVPFSYLAGSGGPVGFSVEITNAIVDAVKKQLNKPGLKV 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
               + ++ R   LQ+  IDI   +T    +R   +   F    ++ G   ++ K  GI 
Sbjct: 82  DMQAVTSQNRIPLLQNGTIDIECGSTTNNAVRGKDVQ--FAINYFYTGTRLLVKKNSGIK 139

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + + L+   +    GTT    +  Y K +N+ +  ++ +  ++      A R +A+  D 
Sbjct: 140 NWADLARKKVSSTTGTTNAQVIRKYSKDNNLDFDIVLGKDHDDSMLLVDAGRAEAFAMDD 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             L+ LK     P++  ++ D +   P A  + + D ++  +V+     M+ + E  
Sbjct: 200 ILLFGLKNNARNPADWDVVGDALQVEPYACMMRKDDPQFQKLVNGVIGGMMKSGEFE 256


>gi|300312815|ref|YP_003776907.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Herbaspirillum seropedicae SmR1]
 gi|300075600|gb|ADJ64999.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 305

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 97/256 (37%), Gaps = 7/256 (2%)

Query: 5   FFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               +L ++      + S     L  IK    +  G  T  + F+    N    G+  D 
Sbjct: 13  MLSMMLAVLPQQACAADSALGPTLQKIKDANLIAIGHRTSSIPFSYYDENQQVIGYSQDL 72

Query: 64  CR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C     A+ + I     +++ +P+ ++ R   LQ+  ID+    T     R     ++F 
Sbjct: 73  CNKVIDAVKTKIGAAKLEVRMVPVTSQNRTPLLQNGTIDLECGVTSNLKSR--WQQVSFA 130

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +      +  +  GI     L+G ++   AGTT+E  L +  +   M       +  
Sbjct: 131 TNFFVASSRILTKRDSGIKDFPDLAGKAVVTNAGTTSEQLLRNLNEHRKMGMQIQSAKDY 190

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E     ++ R  AY  D   L   + T  +P++ V+  +     P A  + + D ++  
Sbjct: 191 GEAFLILQSGRVAAYVMDDVLLAGARTTAQKPNDWVLTGNPFGAEPYAFMVRRDDPQFKQ 250

Query: 240 IVSWTHYAMVTAEELG 255
           +V  T   ++ + E+ 
Sbjct: 251 LVDDTLSGLMKSGEIK 266


>gi|160880801|ref|YP_001559769.1| extracellular solute-binding protein [Clostridium phytofermentans
           ISDg]
 gi|160429467|gb|ABX43030.1| extracellular solute-binding protein family 3 [Clostridium
           phytofermentans ISDg]
          Length = 287

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 22/265 (8%)

Query: 1   MYKDFFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48
           M K     IL L ++              T  +  A  L DIKK G +K G+ +    F 
Sbjct: 1   MKKKILGVILSLTMVAGILTGCGQTKETNTGATAKARTLEDIKKDGKIKIGVFSDKNPFG 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V +NGD +G+DV F + ++  +     KI+++ + A  R   L+S ++D+   N   T 
Sbjct: 61  YVDSNGDIQGYDVYFAKRIAKDLLGSEDKIEFVYMEAANRVEYLKSAKVDVTLANFTVTK 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
             + S  + F         G +      I+ V QL   ++ V  GTT E      F  ++
Sbjct: 121 --DRSEQVDFALPYMKVALGVVSPDNALITDVDQLKDKTLIVVKGTTAETY----FMENH 174

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + F+  +E   A    R DA++ D + + A           V +  I S   +AP
Sbjct: 175 SDIKLLKFDEYQEAYDALLDGRGDAFSTDNTEVLAWA--LQNKGFSVGIESIGSIDAIAP 232

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEE 253
           A+ +G+ E  + ++    A+  AEE
Sbjct: 233 AVQKGNKELLDWINNEIKAL--AEE 255


>gi|307262182|ref|ZP_07543833.1| hypothetical protein appser12_17280 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868159|gb|EFM99984.1| hypothetical protein appser12_17280 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 298

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 21  MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 81  VDANGKSQGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   I+ + QL G ++ V  GTT +      F  ++ 
Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 253 VQKGNQALLDVINK 266


>gi|254246322|ref|ZP_04939643.1| Extracellular solute-binding protein, family 12 [Burkholderia
           cenocepacia PC184]
 gi|124871098|gb|EAY62814.1| Extracellular solute-binding protein, family 12 [Burkholderia
           cenocepacia PC184]
          Length = 300

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +    L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 4   MKYHKAVLMAAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +       A+   +     +++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 64  SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 121

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 122 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 182 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 241

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 242 DFKKVVDDAISQVEKSGE 259


>gi|187930729|ref|YP_001901216.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|187727619|gb|ACD28784.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
          Length = 301

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 6/256 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F   L  ++            L  I+    +  G+    + F+   +  +  GF  D 
Sbjct: 9   RTFPLALASLLAIGAHAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADL 68

Query: 64  C----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C     A+          I+++P+ ++ R   +Q+  +D+    T     RE     AF 
Sbjct: 69  CSRVIDAVRKKTGKPNLDIKHIPVTSQNRTSLVQNGSVDLECGVTTHLKSRE--QQTAFS 126

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  G   + + K G+     L+G S+   AGTT+E  L        M  + I  +  
Sbjct: 127 TTFFIAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDY 186

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E     ++ R  A+  D   L   +    +P + V+     S       + + D ++  
Sbjct: 187 GESFLTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKK 246

Query: 240 IVSWTHYAMVTAEELG 255
           +V  T   ++ + E+ 
Sbjct: 247 LVDDTMAGVMKSGEVK 262


>gi|300722327|ref|YP_003711612.1| glutamate/aspartate ABC transporter periplasmic-binding protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297628829|emb|CBJ89407.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 295

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 95/249 (38%), Gaps = 7/249 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +           L  IK  G +  G     V FA   +N +  G+ 
Sbjct: 1   MRKLMLTMML-LGAVGAAHAEELTGTLKKIKDTGMIAVGHRESSVPFAYYDSNQNVIGYA 59

Query: 61  VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+      A+ + +     +++ +P+ ++ R   LQ+   +    +T  T  R+     
Sbjct: 60  QDYSNMIVDAIKAKLNMPNLQVKLIPVTSQNRIPLLQNGTYNFECGSTTNTPERQKQAA- 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +      + +K  GI     L+G ++ V AGTT+E+ L       NMK   I  
Sbjct: 119 -FSNTIFIVSTRLLTNKDSGIKGFDDLAGKNVVVSAGTTSEIILNKLNDEKNMKMRIISA 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +    +P + +I+ +  S+      + + D +
Sbjct: 178 KDHGDSFRTLESGRAAAFMVDDALLAGERAKAKKPDQWLIVGEPQSREGYGCLMRKDDAQ 237

Query: 237 WYNIVSWTH 245
           +  +V    
Sbjct: 238 FKALVDEVI 246


>gi|330973079|gb|EGH73145.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 304

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
               + +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 6   HLLGAAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSH 65

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 66  DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSIGIFEVGTRLLAKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNTDKQMGMNVISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + L        +P +  +     S       + +GD  +
Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + E+ 
Sbjct: 244 KKAVDDAIVATYKSGEIN 261


>gi|221214523|ref|ZP_03587494.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD1]
 gi|221165780|gb|EED98255.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD1]
          Length = 378

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 82  MKYHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 141

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +       A+   +     +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 142 SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 199

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        M  + I 
Sbjct: 200 AAFSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIIS 259

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 260 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDP 319

Query: 236 EWYNIVSWTHYAMVTAEE 253
           E+  +V      +  + E
Sbjct: 320 EFKKVVDDAIAQVEKSGE 337


>gi|172063476|ref|YP_001811127.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171995993|gb|ACB66911.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 298

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 8/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F    + L      +         L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRFRWLAVALTCALAGTAHAQGLTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +  A+  +       ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDALKVELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+   + L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238

Query: 235 TEWYNIVSWTH 245
             + ++V    
Sbjct: 239 PAFKHVVDGVI 249


>gi|239503576|ref|ZP_04662886.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB900]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S L +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQTDHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVLATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|260550584|ref|ZP_05824793.1| ArtI protein [Acinetobacter sp. RUH2624]
 gi|260406295|gb|EEW99778.1| ArtI protein [Acinetobacter sp. RUH2624]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S L +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNSQEDHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|193077069|gb|ABO11827.2| ArtI protein [Acinetobacter baumannii ATCC 17978]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S L +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|169796305|ref|YP_001714098.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Acinetobacter baumannii AYE]
 gi|213156959|ref|YP_002319004.1| ABC transporter, periplasmic binding protein [Acinetobacter
           baumannii AB0057]
 gi|215483764|ref|YP_002325989.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB307-0294]
 gi|294837743|ref|ZP_06782426.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp.
           6013113]
 gi|294859370|ref|ZP_06797139.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp.
           6013150]
 gi|301344840|ref|ZP_07225581.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB056]
 gi|301510867|ref|ZP_07236104.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB058]
 gi|301596929|ref|ZP_07241937.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB059]
 gi|169149232|emb|CAM87114.1| putative amino acid transport protein (ABC superfamily, peri_bind)
           [Acinetobacter baumannii AYE]
 gi|213056119|gb|ACJ41021.1| ABC transporter, periplasmic binding protein [Acinetobacter
           baumannii AB0057]
 gi|213987452|gb|ACJ57751.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB307-0294]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S L +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K + I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKARPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|319791997|ref|YP_004153637.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315594460|gb|ADU35526.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 300

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 104/255 (40%), Gaps = 7/255 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFC 64
               L L      + + +   L  IK+ G ++ G     + F+    A+    G+  D C
Sbjct: 10  LALGLTLAFTCGAASAQDGGTLQKIKESGTIQIGARDSQIPFSYKLSADSAPIGYTNDIC 69

Query: 65  ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                A+ + +     +++Y  LN+  R   LQ+  +D+    T  T  R+    + F P
Sbjct: 70  LKIVDAVKAKLGLSKIEVRYTMLNSTNRIPLLQNGTVDLDCATTTNTTQRQA--QVDFAP 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +       + K  GI+++S L+G ++   +G+T+   L    K+  ++ + I  +   
Sbjct: 128 SHFVTNITAAVRKNSGINALSDLNGKNVATVSGSTSIQLLRGARKSGTIEVNEIAGKDTS 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        R DAY  D   L  +  +   P E+ +L + + + P    + + D ++  +
Sbjct: 188 DGFLLLSTGRADAYVLDDVQLAGMIASATNPGEYKLLKESLRQEPYGIMLRKDDPQFKAL 247

Query: 241 VSWTHYAMVTAEELG 255
           V  T   ++ +  + 
Sbjct: 248 VDETVTGLMKSGAIE 262


>gi|299770571|ref|YP_003732597.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1]
 gi|298700659|gb|ADI91224.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S + +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSVKILSSIAVAGVLLTACSKTPSTEQASNAQTDHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFSEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|193063399|ref|ZP_03044489.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           E22]
 gi|194429723|ref|ZP_03062239.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           B171]
 gi|260842881|ref|YP_003220659.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str.
           12009]
 gi|192930983|gb|EDV83587.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           E22]
 gi|194412204|gb|EDX28510.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           B171]
 gi|257758028|dbj|BAI29525.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str.
           12009]
 gi|323158891|gb|EFZ44902.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           E128010]
          Length = 302

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 87/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 25  AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 85  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 143 GDIKDFADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   + T+ E 
Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262

Query: 255 G 255
            
Sbjct: 263 E 263


>gi|213609637|ref|ZP_03369463.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 285

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDD 74
                 S L  I K G +  G     V F+         G+  D+  A+       +   
Sbjct: 8   GAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKP 67

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   L R+      F    +  G   +  K 
Sbjct: 68  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSDTIFVVGTRLLTKKG 125

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I     L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 126 GDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAF 185

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D E+  ++  T     T+ E 
Sbjct: 186 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGEA 245

Query: 255 G 255
            
Sbjct: 246 E 246


>gi|167038160|ref|YP_001665738.1| extracellular solute-binding protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116569|ref|YP_004186728.1| family 3 extracellular solute-binding protein [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|326389621|ref|ZP_08211187.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166856994|gb|ABY95402.1| extracellular solute-binding protein, family 3 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929660|gb|ADV80345.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|325994336|gb|EGD52762.1| extracellular solute-binding protein family 3 [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 261

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 95/262 (36%), Gaps = 17/262 (6%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55
           M K     F    + L ++     +  A+ L  IK++G +  G +     +   K  G+ 
Sbjct: 1   MNKKTLFVFLTMTIILGLILSACGNKPANTLDKIKEKGVIVMGTSADFPPYEFHKVEGNK 60

Query: 56  --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GFDVD   A++  +      ++   ++ K    ALQ+ +ID+       T  R   
Sbjct: 61  DTIVGFDVDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMAIAGMTPTPERAK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  + Y   Q  ++     IS    L G ++ VQ GTT+E                
Sbjct: 117 -SVDFSDLYYDSKQVVVVRNDSPISKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVKL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               RV +     +  RCDA   + +   A            +      ++  A A+ +G
Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLENTVANAYLKEYKDMKILNMKEINTVENGSAVAVAKG 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + E  NI++     +  + E  
Sbjct: 231 NKELVNIINDVIKELKASGEYD 252


>gi|312171723|emb|CBX79981.1| putative glutamate/aspartate ABC transport system, periplasmic
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 309

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 20/270 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGLVGF 47
           M  +   + +    I    + + +A              L  I K G +  G     V F
Sbjct: 1   MKFRKLGLCLALAGIASGIAHAEDAKAPATADAQQQTHTLEKIAKNGVIVVGHRESSVPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103
           +         G+  D+  A+ +AI         +++ LP+ ++ R   LQ+   D    +
Sbjct: 61  SYYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T   + R+     +F    +  G   ++ K   I   + L G ++ V +GTT+E+ L   
Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKL 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                M    +  +   +      + R  A+  D + L   +    +PSE  IL    S+
Sbjct: 179 NDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSR 238

Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252
                 + +GD+E+  ++  T   A  + E
Sbjct: 239 EAYGCMLRKGDSEFKKLMDDTIVQAQTSGE 268


>gi|293608419|ref|ZP_06690722.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828992|gb|EFF87354.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S L +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSLAVAGVLLTACSKTPSTEQAGNAQADHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|184157761|ref|YP_001846100.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii ACICU]
 gi|294842167|ref|ZP_06786850.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp.
           6014059]
 gi|183209355|gb|ACC56753.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Acinetobacter baumannii
           ACICU]
 gi|322508071|gb|ADX03525.1| ArtI protein [Acinetobacter baumannii 1656-2]
 gi|323517653|gb|ADX92034.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S L +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQADHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|134291750|ref|YP_001115519.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134134939|gb|ABO59264.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 296

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 92/259 (35%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F  +  L+     S +  A  L  I + G +        V F+ +       GF 
Sbjct: 1   MRHRSFAVLATLLAACVASTAACAQTLDKISRSGRIVVSYREAAVPFSYLLTPHKAVGFS 60

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           VD   A+   +         ++ Y+P+  + R   L     D+   +T  T  R   +  
Sbjct: 61  VDVTEAIVDDVRKTLRRPDLRVAYVPVTGQNRIPLLVDGSYDLECGSTTNTSARGKDVA- 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   +  +   I   + L+  ++   AG+T E TL     A ++    ++ 
Sbjct: 120 -FSINYFYAGTRLMAKRASHIGDYADLAHQAVATVAGSTNEKTLRRELAARHIDADVVLA 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        +  A   D   LY L+   D P   V+  D +   P A  + + D  
Sbjct: 179 KDYADALQMVATDKVAALALDDVLLYGLRANADDPGSWVVAGDALQVEPYACMVRKDDPA 238

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   ++ + E  
Sbjct: 239 FKRLVDGTLTRLIRSGEFA 257


>gi|319408772|emb|CBI82429.1| amino-acid ABC transporter binding protein [Bartonella
           schoenbuchensis R1]
          Length = 302

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 97/258 (37%), Gaps = 5/258 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        ++I   +        L  IK  G +  G+    +G A    NG + GF 
Sbjct: 1   MKKSLLAFSAAIVIGLTSMVQAQNDTLEKIKTTGEITLGVRESSIGLAYAIGNGKYTGFH 60

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    +   I        KI YLP+ ++ R   LQ+   D    +T     R       
Sbjct: 61  TEMAEYIIDDISKKIGQSIKIHYLPITSQNRIPLLQNGTYDFECGSTTNDSSRNKEAA-- 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +     + K  GI S+  L+G ++    GTT+   +    +A N+ +  +  +
Sbjct: 119 FAYTTYVEEVRIAVKKNSGIKSIEDLNGKTVATTTGTTSVQLIRKNKRAKNINFKVVTGK 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R DA+  D S L      +  PS+++IL  ++S  P+A  +   D   
Sbjct: 179 DHGDSFLLLESGRADAFVMDASILSGHISKSKNPSDYIILDTVLSIEPIACMLRLNDKNL 238

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++ +    +    L 
Sbjct: 239 EQEINNSIMRQIKDGSLE 256


>gi|307250985|ref|ZP_07532911.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255603|ref|ZP_07537408.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260054|ref|ZP_07541766.1| hypothetical protein appser11_18400 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306857013|gb|EFM89143.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861452|gb|EFM93441.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865890|gb|EFM97766.1| hypothetical protein appser11_18400 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 298

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 21  MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +     K++++   A  R   L+S ++D++  N   T  
Sbjct: 81  VDANGKSQGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   I+ + QL G ++ V  GTT +      F  ++ 
Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 253 VQKGNQALLDVINK 266


>gi|319765052|ref|YP_004128989.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|317119613|gb|ADV02102.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
          Length = 295

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 6/237 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78
            A  L  I   G +        V F+ +  +G   GF V+   A+  A+         K+
Sbjct: 22  QADTLKKIADTGKITVAYRESSVPFSYLAGSGGPVGFSVEITNAIVDAVKKQLNKPGLKV 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
               + ++ R   LQ+  IDI   +T    +R   +   F    ++ G   ++ K  GI 
Sbjct: 82  DMQAVTSQNRIPLLQNGTIDIECGSTTNNAVRGKDVQ--FAINYFYTGTRLLVKKNSGIK 139

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + + L+   +    GTT    +  Y K +N+ +  ++ +  ++      A R +A+  D 
Sbjct: 140 NWADLARKKVSSTTGTTNAQVIRKYSKDNNLDFDIVLGKDHDDSMLLVDAGRAEAFAMDD 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             L+ LK     P++  ++ D +   P A  + + D ++  +V+    +M+ + E  
Sbjct: 200 ILLFGLKNNARNPADWDVVGDALQVEPYACMMRKDDPQFQKLVNGVIGSMMKSGEFE 256


>gi|307257780|ref|ZP_07539537.1| hypothetical protein appser10_17650 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306863686|gb|EFM95612.1| hypothetical protein appser10_17650 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 298

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    + +    L     + +  +S     +  IK++G ++ G+      F  
Sbjct: 21  MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGH 80

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V ANG  +GFDV+  + +++ +   P K++++   A  R   L+S ++D++  N   T  
Sbjct: 81  VDANGKSQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   IS + QL G ++ V  GTT +      F  ++ 
Sbjct: 141 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 194

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           + + + F++  E   A +  R  A   D + ++A     + P+  V +  +     +APA
Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252

Query: 230 IIQGDTEWYNIVSW 243
           + +G+    ++++ 
Sbjct: 253 VKKGNQALLDVINK 266


>gi|325121846|gb|ADY81369.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 286

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S L +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSGLAVAGVLLTACSKTPSTEQASNTQEDHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIN 261


>gi|300715838|ref|YP_003740641.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae
           Eb661]
 gi|299061674|emb|CAX58790.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae
           Eb661]
          Length = 300

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 88/237 (37%), Gaps = 6/237 (2%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PS 76
           ++ +  L  I K G +  G     V F+         G+  D+  A+ +AI         
Sbjct: 25  ASQSPTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVAAIKAKLNKPDL 84

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           +++ LP+ ++ R   LQ+   D    +T   L R+      F    +  G   ++ K   
Sbjct: 85  QVKMLPVTSQNRIPLLQNGTYDFECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKGSP 142

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I     L G ++ V +GTT+E+ L        M    I  +   +      + R  A+  
Sbjct: 143 IKDFPDLKGKTVVVTSGTTSEILLNKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMM 202

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           D + L   +    +P   VI+    SK      + + D  +  ++  T     T+ E
Sbjct: 203 DDALLAGERAKAKKPDNWVIVGTPQSKEAYGCMLRKDDAGFKQLMDDTIAKAQTSGE 259


>gi|261822382|ref|YP_003260488.1| glutamate and aspartate transporter subunit [Pectobacterium
           wasabiae WPP163]
 gi|261606395|gb|ACX88881.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 298

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     IL             A  L  +K  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62

Query: 61  VD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
                    A+   +     +++ LP+ ++ R   LQ+   D+   +T   L R+     
Sbjct: 63  QAYSDKIVDAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K  G+     L+G ++ V +GTT+E+ L    +   +K   I  
Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +       +  I+    S+      + + D +
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKSADQWDIVGKAQSEEAYGCMLRKDDPQ 240

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   + T+ E  
Sbjct: 241 FKKLVDDTIAEVQTSGEAE 259


>gi|262278742|ref|ZP_06056527.1| ArtI protein [Acinetobacter calcoaceticus RUH2202]
 gi|262259093|gb|EEY77826.1| ArtI protein [Acinetobacter calcoaceticus RUH2202]
          Length = 286

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S + +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSIAVAGVLLTACSKTPSTEQASNTQEDQSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|224824053|ref|ZP_03697161.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224603472|gb|EEG09647.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 301

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 89/253 (35%), Gaps = 9/253 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K F +    ++     S S+ A     L  IK+ G +        + F+ +  +    
Sbjct: 1   MSKSFKLLPAAVLAFSMISVSSAAELTGTLKKIKETGAIVLAHRDAAIPFSYLDNDQKPI 60

Query: 58  GFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  +   A++  +  + +     ++   + A+ R   +Q+  +D+   +T   + R+  
Sbjct: 61  GYSWEIANAVAERVSKELNMPSLVVRTNLVTAQTRIPLIQNGTVDLECGSTTNNVERQR- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    +  G   +  K  G+   + L   ++   AGTT E  L        M  + 
Sbjct: 120 -QVDFSVGIFVTGTRLLTKKTSGVKDFADLKSKNVVTTAGTTAERLLKAMNADKQMDMNI 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   E     ++ R  A+  D      L   +  PSE  I     S       + + 
Sbjct: 179 ISAKDHGESFQMLQSGRASAFIVDDVIEAGLMTISKNPSEWAITGKPQSVENYGCMLRKD 238

Query: 234 DTEWYNIVSWTHY 246
           D  +  +V     
Sbjct: 239 DPAFKKVVDDAIK 251


>gi|78065231|ref|YP_368000.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77965976|gb|ABB07356.1| L-glutamate-binding protein / L-aspartate-binding protein
           [Burkholderia sp. 383]
          Length = 297

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  +   +    L      + +     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYQKAVLMFAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +       A+   +     +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|237665766|ref|ZP_04525754.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|237658713|gb|EEP56265.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 286

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 28/285 (9%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFA 48
           M K     +IL +  L  TS +              S +  IK+RG +K G+ +    F 
Sbjct: 1   MKKLRKLAAILVVGSLALTSLTGCGTVADKSGQENKSSIEAIKQRGTIKIGVFSDKAPFG 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V +NG+ +GFDV   +  +  +  D SK +++ ++A  R   L+S ++D++  N   T 
Sbjct: 61  YVDSNGENQGFDVYIAKRFAKDLLGDESKAEFVLVDAASRVAYLESNKVDMIMANFTVTD 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
             +    + F         G +  +   I S  +L G  I V  GTT E     +   + 
Sbjct: 121 --DRKEKVDFANPYMKVSLGIVSPESAPIKSADELKGKKIIVAKGTTAET----FMTENY 174

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + +E+  EI  A +  R D    D + + A     D P   V +  + S+  +AP
Sbjct: 175 PDVELVKYEQYSEIFQALKDGRGDGILSDNTEVIAWA--KDNPGFTVGVSTLGSQDTIAP 232

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           A+ +G+TE            +  E   + ++N    + + T   V
Sbjct: 233 AVAKGNTE--------LQEWINTELETLGKENFVHKAYEETLKSV 269


>gi|223040121|ref|ZP_03610401.1| acriflavine resistance protein [Campylobacter rectus RM3267]
 gi|222878598|gb|EEF13699.1| acriflavine resistance protein [Campylobacter rectus RM3267]
          Length = 278

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 15/267 (5%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K  F  +     +F        +     L  IKKRG+++ G+ +    F  V   G  
Sbjct: 1   MKKLLFSFLAIFAAVFLMDQANVCAAETDALAKIKKRGYVRVGVFSDKPPFGYVDKEGKN 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G+D+ F + ++  +  D SK+++  + A  R   L S ++DI   N   T  R     +
Sbjct: 61  QGYDIYFAKRIAKDLLGDESKVKFELVEAASRVEVLVSDKVDITLANFTKTPERTRV--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F         G +      I SV +L G  + V  GTT +      F  ++     + +
Sbjct: 119 DFALPYMKVSLGVVSPNGAVIKSVDELKGKKLIVNKGTTADAY----FTKNHPDIELVKY 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  E  AA    R  A   D + L+A     + P   V +  +     +APA+ + +  
Sbjct: 175 DQNTETFAALVDKRGTALAHDNALLFAWA--KENPGFTVGIEALGEIDVIAPAVKKRNKA 232

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQ 263
               ++     ++   +     KN + 
Sbjct: 233 LLEWLN---NEIIELGKENFFHKNYDA 256


>gi|51891628|ref|YP_074319.1| amino acid ABC transporter substrate-binding protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855317|dbj|BAD39475.1| amino acid ABC transporter substrate-binding protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 275

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 8/230 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           +  I+  G L+ G+   +  F          +G ++D  R ++  IF D SK+Q+  +NA
Sbjct: 44  VQKIRDAGVLRVGVKEDVPKFGYFDPAKNAHEGLEIDLARRIAKEIFGDESKVQFTGVNA 103

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           K R  AL + +ID++      T  R+      F    + D  GF++    GI S   L G
Sbjct: 104 KTRGPALDNGEIDLVIATFTITEERKK--SWNFSDPYFTDYVGFLVLADSGIQSWKDLDG 161

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             I V    +T   L +  +   +K   + F    EI AA  + R DA++ D S L+   
Sbjct: 162 KVIGVAQSASTRAALTEQAEKDGIKVEFMEFATYPEIKAALDSRRIDAFSVDQSILWGY- 220

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +  ++V+LPD  +      A    +TE    V+     M  + EL 
Sbjct: 221 ----KDDKNVMLPDKFAPQEYGIATKLSNTELAEFVNNILKGMKESGELD 266


>gi|107021746|ref|YP_620073.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116688692|ref|YP_834315.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105891935|gb|ABF75100.1| L-aspartate-binding protein / L-glutamate-binding protein
           [Burkholderia cenocepacia AU 1054]
 gi|116646781|gb|ABK07422.1| L-aspartate-binding protein / L-glutamate-binding protein
           [Burkholderia cenocepacia HI2424]
          Length = 297

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +    L      +++     L  IK  G +  G     + F+    N    G+
Sbjct: 1   MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +       A+   +     +++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 61  SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|56697500|ref|YP_167868.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Ruegeria pomeroyi DSS-3]
 gi|56679237|gb|AAV95903.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Ruegeria pomeroyi DSS-3]
          Length = 287

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 5/256 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      + L +    +       L  I   G +  G     V FA +  N    G+ +D
Sbjct: 5   KPILAGAVALGLALPVAAQDRTGTLAKIDASGEIVIGHRESSVPFAYLDENQKPVGYSID 64

Query: 63  FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            C  +  A+         I+Y+P+N K R   + +  ID+   +T   L R     + + 
Sbjct: 65  LCMKIVEAVSAELGKELSIKYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QEQVEYL 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P T+  G   ++ K  GISSV+ L G ++ +  GTT E  +    +   +    +     
Sbjct: 123 PTTFITGTKLMVRKGSGISSVADLDGKAVALAQGTTNERAVKAAIETMGLDVKVLPVRDH 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   +    R D Y  D   L+ L   +  P    ++ D +S  P A  + + D+ +  
Sbjct: 183 AEGMLSLETDRVDVYATDHILLFGLIAKSKTPDAFEVVGDFLSFDPYALMVRRDDSAFEL 242

Query: 240 IVSWTHYAMVTAEELG 255
           +      A+  + E+ 
Sbjct: 243 VGKKALAAVFRSGEID 258


>gi|20807013|ref|NP_622184.1| ABC-type amino acid transport system, periplasmic component
           [Thermoanaerobacter tengcongensis MB4]
 gi|20515498|gb|AAM23788.1| ABC-type amino acid transport system, periplasmic component
           [Thermoanaerobacter tengcongensis MB4]
          Length = 260

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 98/260 (37%), Gaps = 17/260 (6%)

Query: 2   YKDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG---DW 56
            K  F++   +  L F  +   +  + +  IK++G +  G +     F   K  G   + 
Sbjct: 3   KKSLFLAFAVVFALAFMLSGCGSKFNTVDQIKQKGVIVMGTSADFPPFEFHKVEGGKDEI 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D   A++  +      ++   ++ K    ALQ+ ++D++      T  R+    +
Sbjct: 63  VGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRVDMVIAGMTPTAERKK--SV 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  + Y   Q  ++     IS    L   +I VQ GTT+E                   
Sbjct: 118 DFSDLYYDSRQVVVVKNDSPISKFDDLKVKTIAVQIGTTSEEAAKKI-----PNVKLKQL 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235
            RV +     +  RCDA   + +   A         + + + +I +     A A+ +G+ 
Sbjct: 173 NRVSDEFMDLQNGRCDAIVVEDTVAKAYLKEYKD-MKILYMDEINNVENGSAVAVAKGNK 231

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              ++V+     +  + E  
Sbjct: 232 SLLDVVNEVIKELKQSGEYD 251


>gi|254518100|ref|ZP_05130156.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Clostridium sp. 7_2_43FAA]
 gi|226911849|gb|EEH97050.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Clostridium sp. 7_2_43FAA]
          Length = 288

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 13/254 (5%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K        ++ L +L         S   +  IKK G ++ G+ +    F  V   G 
Sbjct: 14  MKKFLSLILTLVIALGVLVGCGSKAEESKASIDVIKKAGKIRIGVFSDKPPFGFVDEKGA 73

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+DV   + L+  +  D +K++++ + A  R   LQS ++DI+  N   T  R+    
Sbjct: 74  NQGYDVYLAKRLAKDLLGDENKVEFVLVEAANRVEYLQSNKVDIILANFTVTPERKE--K 131

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G +      I SV  L G  + V  GTT E      F  +      + 
Sbjct: 132 VDFATPYMKVSLGVVSPDGAPIKSVDDLKGKKLLVNKGTTAESY----FTKNYPDIELVK 187

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE+  E  AA +  R  A   D + L+A     +       +  +  +  +APA+ +GD 
Sbjct: 188 FEQNTETFAALKDGRGAALAHDNTLLFAWA--RENEGYDTYISSLGEEDAIAPAVKKGDA 245

Query: 236 EWYNIVSWTHYAMV 249
           E    ++     ++
Sbjct: 246 ELLEWLNKEVDTLI 259


>gi|332094327|gb|EGI99378.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii
           5216-82]
          Length = 302

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 25  AAPVAGSTLDKIAKNGMIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 85  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+
Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  ++  T   M T+ E 
Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGEA 262

Query: 255 G 255
            
Sbjct: 263 E 263


>gi|261377618|ref|ZP_05982191.1| CjaA protein [Neisseria cinerea ATCC 14685]
 gi|269146371|gb|EEZ72789.1| CjaA protein [Neisseria cinerea ATCC 14685]
          Length = 284

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           +K    S    + L              S  A+ +  IK++G ++ G+      F  V A
Sbjct: 7   FKALLASAAIAVGLTACGGDSGDTQSSQSGGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R  
Sbjct: 67  NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I+ ++QL   ++ V  GTT +     +F   + +  
Sbjct: 127 --AVDFADPYMKVALGVVSPKDKPITDIAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F++  E   A +  R  A   D + L+A     + P+  V + ++     +APA+ +
Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQK 238

Query: 233 GDTEWYNIVSWTHYAM 248
           G+T+  N V+    AM
Sbjct: 239 GNTDLLNWVNGEIAAM 254


>gi|225025468|ref|ZP_03714660.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC
           23834]
 gi|224941752|gb|EEG22961.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC
           23834]
          Length = 297

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 8/224 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IK+RG ++ G+      F  V ANG  +GFDV+  + L++ +   P K++++   A 
Sbjct: 56  LAKIKERGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKYLANDLLGSPDKVEFVLTEAA 115

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   ++S ++D++  N   T  R     + F         G +  K   I+ +SQL G 
Sbjct: 116 NRVEYVRSGKVDLILANFTQTPERAEV--VDFASPYMNVALGVVSPKGAPITDLSQLEGK 173

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           ++ V  GTT +      F  ++   + + F++  E   A +  R  A   D + L+A   
Sbjct: 174 TLLVNKGTTADAY----FTKNHPNINLLKFDQNTETFDALKDGRGVALAHDNALLWAWA- 228

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             + P+  V++ +I     +APA+ +GD    N V+    A+  
Sbjct: 229 -KENPNFEVVIGNIGPAEHIAPAVRKGDQSLLNWVNQEIAAIKQ 271


>gi|260555372|ref|ZP_05827593.1| ArtI protein [Acinetobacter baumannii ATCC 19606]
 gi|260411914|gb|EEX05211.1| ArtI protein [Acinetobacter baumannii ATCC 19606]
          Length = 286

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M+K      +S   +  +  T+ S   S            L  +KK G L+  +      
Sbjct: 1   MFKRNSIKILSSFAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V + G+ +GFDV   + ++  +  D  K++++   A  R   L+S + D++      
Sbjct: 61  FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  K K I+ ++QL G ++ V  GT+++      F  
Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           H  K + + FER  +   A    R DA + D +  YAL      PS    +  I  +  +
Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           APA+ +G+T+  N ++     + T+ E+ 
Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261


>gi|253990626|ref|YP_003041982.1| glutamate and aspartate transporter subunit [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782076|emb|CAQ85240.1| glutamate/aspartate transport system permease protein glti
           [Photorhabdus asymbiotica]
          Length = 313

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 92/250 (36%), Gaps = 7/250 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M     V  + L+ +   + +      L  IK  G +  G     V FA    +    G+
Sbjct: 17  MRMRNLVLTMMLLGVAGAAQAEELTGTLKKIKDDGVIIVGHRESSVPFAYYDNHQKVVGY 76

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D+   +  A+         +++ +P+ ++ R   LQ+   D    +T   L R+    
Sbjct: 77  SQDYSNLIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQK--Q 134

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +      +  K  GI     L+G ++ V AGTT+E+ L       NMK   I 
Sbjct: 135 VTFSNTIFIVNTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKNMKMRIIS 194

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P +  I+    S+        + D 
Sbjct: 195 AKDHGDSFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGKPQSREAYGCISRKDDL 254

Query: 236 EWYNIVSWTH 245
           ++  ++  T 
Sbjct: 255 QFKKLIDETI 264


>gi|78062134|ref|YP_372042.1| extracellular solute-binding protein [Burkholderia sp. 383]
 gi|77970019|gb|ABB11398.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 298

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 84/251 (33%), Gaps = 8/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +      + L      +    A    L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRLRWLAVALSCALAGTAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +   +  D       ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDQLKTDLNAPNLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+   + L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKAMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDD 238

Query: 235 TEWYNIVSWTH 245
             + ++V    
Sbjct: 239 PAFKHVVDGVI 249


>gi|168764668|ref|ZP_02789675.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|217324409|ref|ZP_03440493.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|189365371|gb|EDU83787.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|217320630|gb|EEC29054.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. TW14588]
          Length = 302

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGDDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|167628301|ref|YP_001678800.1| glutamine abc transporter, glutamine-binding protein
           [Heliobacterium modesticaldum Ice1]
 gi|167591041|gb|ABZ82789.1| glutamine abc transporter, glutamine-binding protein
           [Heliobacterium modesticaldum Ice1]
          Length = 282

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 32/269 (11%)

Query: 1   MYKDFFVSIL-----CLIILFFTSFSTNASI-----------------LGDIKKRGFLKC 38
           M+K +   I       L+         +A                   +  IK RG+L  
Sbjct: 1   MFKKWTKGIALCCTAALLGTLAVGCGGSAPTGGEKKAAENQTQTSGDYIQTIKNRGYLIA 60

Query: 39  GINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           G+   +  F ++K+     +GF+VD  + L+  +F D SK++   + ++ R   LQ+ QI
Sbjct: 61  GVKNDVPLFGQLKSGADKPEGFEVDIMKELAKKLFGDESKVKLEKVESQTRIPMLQNGQI 120

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           DI++  T  T  R+    + F  + +  GQ  ++ K   I SV+ L G ++    G+T+ 
Sbjct: 121 DIVAGTTTITEERKK--QIDFSDVYFKAGQSLLVKKGSPIKSVTDLKGKTVSTVRGSTSA 178

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             + +      +      +    E   A +  R DA T D S L      +       ++
Sbjct: 179 KNIREKAPDAKVD----EYATYTEAFQALKLGRSDAMTTDNSILMGFANEDPN---FELV 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + ++ P      +G  EW N V+    
Sbjct: 232 GGLFTEEPYGFGFQKGHPEWVNYVNDFLK 260


>gi|121606347|ref|YP_983676.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120595316|gb|ABM38755.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 299

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 109/258 (42%), Gaps = 6/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+      F+  +  +  +K  G +  G+       +    +G + G+ 
Sbjct: 1   MKFKIATLTLALLA-SGAVFAQASDTVAKVKASGVVTMGVRDSSGALSYTLGDGKYVGYH 59

Query: 61  VDFCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           V+ C+ + + +        +++Y P+ ++ R   +Q+  +DI   +T     R   +   
Sbjct: 60  VEICQRILANLEKAAGRKLEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNATRAKDVA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   T+ +     +    GI+SV+QL+G ++    GTT+  TL    +A N+ ++ I  +
Sbjct: 118 FLHTTFVEEVRIAVKTSSGITSVAQLNGKNVATTTGTTSVQTLRRNERATNVNFNEIFGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R DA+  D S L     +   P++  I+ +++S  P+A  I + D   
Sbjct: 178 DHSDSFLLLESGRADAFVMDGSILAGNIASAKNPADFKIVGEVLSVEPIAIMIRKDDAGL 237

Query: 238 YNIVSWTHYAMVTAEELG 255
             I   T   ++ + EL 
Sbjct: 238 KKIGDDTINGLIKSGELA 255


>gi|330823278|ref|YP_004386581.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|329308650|gb|AEB83065.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 299

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 7/253 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + + ++    ++ +     L  IK  G +  G+       A    +G + GF 
Sbjct: 1   MKKHLLAAAITVLA-AGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFH 59

Query: 61  VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    ++      +     +I+Y P+ ++ R   + +  +D+   +T   L R+  +  
Sbjct: 60  TEMAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVA- 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +     +    GI+ +  L+G +I    GTT+  TL    +A  M +  ++ 
Sbjct: 119 -FANTTYVEEVRIAVKANSGINDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMG 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D S L      +  P++  I+ + +S  P+A  + + D  
Sbjct: 178 KDHADSFLMLETGRADAFIMDGSILAGNISKSKSPNDFKIVGEALSVEPIACMLRKDDPA 237

Query: 237 WYNIVSWTHYAMV 249
           +   V  +  A +
Sbjct: 238 FKKAVDESIVAQI 250


>gi|329906185|ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding protein precursor gltI
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327547318|gb|EGF32154.1| Glutamate Aspartate periplasmic binding protein precursor gltI
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 313

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 93/250 (37%), Gaps = 7/250 (2%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + ++   ++   + +     L  IK  G +  G+    + F+ +     ++G+
Sbjct: 1   MKLAKMMLVLIGSGLIASAAQAQETGTLKKIKDSGQITLGVRDSSIPFSYLDDKQSYQGY 60

Query: 60  DVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D C  +       +      ++  P+ +  R   + +  +D++  +    + R+    
Sbjct: 61  SIDICMKIVTSIQKELGMTSLNVKLNPVTSATRIPLMANGTVDLVCGSATNNIERQK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           ++F P T+      +  K   I ++  + G S+   +GT+    L       N+  + + 
Sbjct: 119 VSFAPTTFVTANRLLAKKSSNIKTLDDMKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVMT 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D   L +L  ++  P+++ I  + +S  P    + + D 
Sbjct: 179 AKDHAEAFLMVETGRAVAFGMDDILLASLAASSKSPADYSITTEALSTEPYGIMLRREDP 238

Query: 236 EWYNIVSWTH 245
            +   V    
Sbjct: 239 AFKKSVDTAV 248


>gi|291085702|ref|ZP_06353786.2| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Citrobacter youngae
           ATCC 29220]
 gi|291070188|gb|EFE08297.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Citrobacter youngae
           ATCC 29220]
          Length = 317

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 95/260 (36%), Gaps = 12/260 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + + +      S L  I K G +  G     V F+         
Sbjct: 19  RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 78

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   + R+  
Sbjct: 79  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 138

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I   + L G ++ V +GTT+E+ L    +   M    
Sbjct: 139 AA--FSDTIFVVGTRLLAKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRI 196

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 197 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKD 256

Query: 234 DTEWYNIVSWTH-YAMVTAE 252
           D E+  ++  T   A  + E
Sbjct: 257 DPEFKKLMDDTIANAQTSGE 276


>gi|253575034|ref|ZP_04852373.1| extracellular solute-binding protein, family 3 [Paenibacillus sp.
           oral taxon 786 str. D14]
 gi|251845490|gb|EES73499.1| extracellular solute-binding protein, family 3 [Paenibacillus sp.
           oral taxon 786 str. D14]
          Length = 284

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 109/280 (38%), Gaps = 34/280 (12%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTN----------------------ASILGDIKKRGFLK 37
           M K +  +SI  +  L   +   +                         L  IK RG L 
Sbjct: 1   MKKRWRLISIAVVCALTVLAGCASNGAGGNTAGNGGNAAPATGESGTGALAKIKDRGKLV 60

Query: 38  CGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G+      F     + G+ +GFD+D  + ++  I  D + ++   + +K R   L + +
Sbjct: 61  VGVKYDTKLFGLKDPSTGNVEGFDIDISKTIAKHILGDENALELKEVTSKTRIPMLNNGE 120

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ-AGTT 155
           ID++      T  R+    + F  + +  GQ  ++ K   I+ +  L+  S  +   G+T
Sbjct: 121 IDMIVATMTITEERKK--EVDFSDVYFQAGQSLLVKKGSPITGIESLTADSTVLGSKGST 178

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   + +  +        + F+  ++   A +A + DA T D + LY +   +     + 
Sbjct: 179 SVKNIREKVE----GIKVLEFDNYQDAFNALKAGQGDALTTDDAILYGMAAQDPN---YE 231

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++    +  P   A+ +G+++    ++ T   +  + E  
Sbjct: 232 VVGKPFTDEPYGIAVQKGNSDIVQAINDTLKELHDSGEYD 271


>gi|315612724|ref|ZP_07887635.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
 gi|315314834|gb|EFU62875.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
          Length = 273

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 10  MKKKFFLSALLISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 70  GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 125 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLDDSFKPSDYGIVTKKSNTEL 239

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 240 NDYLDTLVTKW 250


>gi|295700116|ref|YP_003608009.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295439329|gb|ADG18498.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 300

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 96/253 (37%), Gaps = 7/253 (2%)

Query: 6   FVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              ++    +   +F+ +A S L  I++ G +  G     V F+ V AN D  GF  D C
Sbjct: 9   VAVLVAATSVSPGAFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDANNDVIGFSQDLC 68

Query: 65  RALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
             +  A+          ++++P+ ++ R   +Q+  +D+    T     R+    + F  
Sbjct: 69  NKIIDAVKAKTKHPDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQS--QVTFGD 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  K  GI     L+G ++    GTT+E  L    +   M    I  +   
Sbjct: 127 TFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQIISAKDYG 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E      + R  AY  D   L   +    +PS+ +I     S       + + D E+  +
Sbjct: 187 EGRLTLESGRAVAYMMDDVLLAGTRTLTAKPSDWIITGTPQSSEAYGFMLRRDDPEFRKL 246

Query: 241 VSWTHYAMVTAEE 253
           V  T   ++   E
Sbjct: 247 VDDTLEQVMKGPE 259


>gi|331672187|ref|ZP_08372979.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA280]
 gi|331070654|gb|EGI42017.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA280]
          Length = 327

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFHTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|313667604|ref|YP_004047888.1| ABC transporter [Neisseria lactamica ST-640]
 gi|313005066|emb|CBN86498.1| putative ABC transporter [Neisseria lactamica 020-06]
          Length = 284

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46
           M      K    S    + L              S+ A+ +  IK++G ++ G+      
Sbjct: 1   MKLNTKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V ANG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   
Sbjct: 61  FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTK 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R     + F         G +  K K I+ V+QL   ++ V  GTT +     +F  
Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----FFTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + F++  E   A +  R  A   D + L+A     + P+  V + ++     +
Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           APA+ +G+ +  N V+    AM
Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254


>gi|241759167|ref|ZP_04757275.1| antigenic protein [Neisseria flavescens SK114]
 gi|241320586|gb|EER56863.1| antigenic protein [Neisseria flavescens SK114]
          Length = 284

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTN---------ASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           +K    S    + L     S+          A+ +  IK++G ++ G+      F  V A
Sbjct: 7   FKALLASAAIAVGLTACGGSSGDAQSSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R  
Sbjct: 67  NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I+ V+QL   ++ V  GTT +     +F   + +  
Sbjct: 127 --AVDFADPYMKVALGVVSPKGKPITDVAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F++  E   A +  R  A   D + L+A     + P   V + ++     +APA+ +
Sbjct: 181 LLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPDFEVAIGNLGPAEFIAPAVQK 238

Query: 233 GDTEWYNIVSWTHYAM 248
           G+ +  N V+    AM
Sbjct: 239 GNADLLNWVNSEIAAM 254


>gi|319638911|ref|ZP_07993669.1| ABC transporter [Neisseria mucosa C102]
 gi|317399815|gb|EFV80478.1| ABC transporter [Neisseria mucosa C102]
          Length = 284

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           +K    S    + L              S+ A+ +  IK++G ++ G+      F  V A
Sbjct: 7   FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDA 66

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R  
Sbjct: 67  NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I+ V+QL   ++ V  GTT +     +F   + +  
Sbjct: 127 --AVDFADPYMKVALGVVSSKDKPITDVAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F++  E   A +  R  A   D + L+A     + P+  V + ++     +APA+ +
Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQK 238

Query: 233 GDTEWYNIVSWTHYAM 248
           G+T+  N V+    AM
Sbjct: 239 GNTDLLNWVNGEIAAM 254


>gi|282599606|ref|ZP_05971190.2| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Providencia
           rustigianii DSM 4541]
 gi|282568694|gb|EFB74229.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Providencia
           rustigianii DSM 4541]
          Length = 310

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 96/253 (37%), Gaps = 15/253 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K     ++  ++L   + +  A      L  IK  G +  G     V F+    +   
Sbjct: 16  MSK-----LVLTMMLLGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNSQKV 70

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+  D+   +  A+         +++ +P+ ++ R   LQ+   D    +T   L R+ 
Sbjct: 71  VGYSQDYSNQIVDAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQK 130

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F    +  G   +  K  GI   + L+G ++ V +GTT+E+ L       NMK  
Sbjct: 131 QAA--FSNTIFVVGTRLLAKKDAGIKDFADLAGKNVVVTSGTTSEIILNQLNDQKNMKMR 188

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   +      + R  A+  D + L   +    +P+   I+    ++      + +
Sbjct: 189 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKQPAIWEIVGKPQTQEAYGCMLRK 248

Query: 233 GDTEWYNIVSWTH 245
            D ++  ++  T 
Sbjct: 249 DDPQFKALIDETI 261


>gi|225076166|ref|ZP_03719365.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens
           NRL30031/H210]
 gi|224952509|gb|EEG33718.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens
           NRL30031/H210]
          Length = 287

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTG 43
           M    K   +     I +  T+               S+ A+ +  IK++G ++ G+   
Sbjct: 1   MKLNAKFKALLAFAAIAVGLTACGGGSSGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGD 60

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  V ANG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N
Sbjct: 61  KPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILAN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +  K K I+ V+QL   ++ V  GTT +     +
Sbjct: 121 FTKTPERAE--AVDFADPYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----F 174

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F   + +   + F++  E   A +  R  A   D + L+A     + P+  V + ++   
Sbjct: 175 FTKSHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPA 232

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAM 248
             +APA+ +G+T+  N V+    AM
Sbjct: 233 EFIAPAVQKGNTDLLNWVNGEIAAM 257


>gi|331266846|ref|YP_004326476.1| ABC transporter, substrate-binding protein,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
 gi|326683518|emb|CBZ01136.1| ABC transporter, substrate-binding protein,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
          Length = 264

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 116 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLEDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDTLVTKW 241


>gi|255528434|ref|ZP_05395230.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296188321|ref|ZP_06856713.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
 gi|255507868|gb|EET84312.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296047447|gb|EFG86889.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
          Length = 275

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 20/256 (7%)

Query: 2   YKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
            K   + +  + +    +           +   + L  IKK G LK G+           
Sbjct: 5   KKAVVLMLSVIFVAALFAGCGKSSSSQSQAQGGNSLEKIKKAGVLKVGLEDSFPPMEFRD 64

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              + KGFD+D    +   +        ++  +     LAL+S + D +      T  R+
Sbjct: 65  KQNELKGFDIDMANEIGKKLGVKTE---FVCTDFNGIILALKSGKFDTIISGLSITDERK 121

Query: 112 ISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
               ++F      + Q  ++      +   + L G ++ V  GTT+E             
Sbjct: 122 K--EISFSDPYVMNSQIIVVKNGNTAVKGANDLKGKTVGVGLGTTSESVATKMQGLK--- 176

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                +++  E        R DA   D           D+  ++ +L + ++K P+    
Sbjct: 177 -EVKKYDKTTEELQDLLIGRIDAVIVDEPVGRYYISEADKKGKYEVLSEKLTKEPMGIGF 235

Query: 231 IQGDTEWYNIVSWTHY 246
              D E  + V     
Sbjct: 236 KNEDKELKDAVQKAIN 251


>gi|322374749|ref|ZP_08049263.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C300]
 gi|321280249|gb|EFX57288.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C300]
          Length = 293

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 30  MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 89

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 90  GIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 144

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 145 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 204

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 205 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLNDSFKPSDYGIVTKKSNTEL 259

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 260 NDYLDNLVTKW 270


>gi|312135672|ref|YP_004003010.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           owensensis OL]
 gi|311775723|gb|ADQ05210.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           owensensis OL]
          Length = 266

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIIL--FFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           MYK     +L + +     +  S+N      L  IKK      G++           N +
Sbjct: 1   MYKKVIALVLLISLFIPLLSGCSSNNQDMTTLEKIKKTKEFAVGMDNTFPPMEFADDNNN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD    ++  +    +K++ + ++      AL+SK+ D +      T  R+ +  
Sbjct: 61  AVGFDVDLANEIAKKLG---AKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           LA   +               I S   L G  I VQA TT +  +    K  N +     
Sbjct: 118 LAGPYLYIRQVIAV-KRGDNSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVTR 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +ER+ +        R  A   D   + A       P +  I P  + K P+  A+ + D 
Sbjct: 176 YERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAELEKEPVGIALRKEDK 233

Query: 236 EWYNIVSWTH 245
           E YN +    
Sbjct: 234 ELYNEIQKIL 243


>gi|312960169|ref|ZP_07774681.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
 gi|311285663|gb|EFQ64232.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
          Length = 305

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 87/254 (34%), Gaps = 7/254 (2%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF-- 63
           V++   ++      +     L  IK  G +  G     + F+ +   +G   G+  D   
Sbjct: 10  VTLTAALMSIPLMAAEPTGTLEKIKTSGTITLGHRDSSIPFSYIADGSGQPVGYSHDIQL 69

Query: 64  --CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               A+   +      ++Y  + ++ R   +Q+  +D+   +T  T  R     + F   
Sbjct: 70  KIVEAIKQELDIPNLNVRYNLVTSQTRIPLVQNGTVDLECGSTTNTAERAR--QVDFSVG 127

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +      ++ K         L G ++   AG+T E  L        M  + I  + + E
Sbjct: 128 IFEASTRLLVRKNSAYKDFQDLDGKNVVTTAGSTAERMLKVMNAEKKMNMNVISAKDIGE 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                 + R  A+  D + L         P + V+     S       + +GD     IV
Sbjct: 188 SYQMLESGRAIAFMQDDALLAGEMAKAKNPEDWVVTGTPQSNEIYGCTMRRGDPALKKIV 247

Query: 242 SWTHYAMVTAEELG 255
             +  ++  + E+ 
Sbjct: 248 DDSIKSLFVSGEIN 261


>gi|323706490|ref|ZP_08118050.1| extracellular solute-binding protein family 3
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534152|gb|EGB23943.1| extracellular solute-binding protein family 3
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 258

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 16/260 (6%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K   +S++ + I+    S  +  S L  +KK G +  G +     F     V      
Sbjct: 1   MKKRLIISLILVTIMSIALSGCSKQSTLSRVKKSGVIVMGTSADFPPFEFHKVVNGKDTI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD   A++  +      ++   ++      ALQS QID+     + T  R+    +
Sbjct: 61  MGFDVDLANAIAKKLGVK---LEIKDMDFTGLIPALQSGQIDMAIAGMNATPERKK--NV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y   Q  ++     I++++ L G ++ VQ GTT+     D              
Sbjct: 116 DFSDEYYNSEQVLVVKNSSNINNLNDLKGKTVAVQLGTTS-----DDAAKKIKGIDIKEL 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235
            R+ +   +    R DA   + +   A         + + + +I    P  + A+ +G+ 
Sbjct: 171 NRLGDAFLSLENGRVDAILMESTIADAYLKEYKD-MKMLHIKEINEAVPGYSVAVAKGNQ 229

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +  N ++     +  + E  
Sbjct: 230 DLVNQINSVIKDLKDSGEYE 249


>gi|270263718|ref|ZP_06191987.1| glutamate/aspartate periplasmic-binding protein, precursor
           [Serratia odorifera 4Rx13]
 gi|270042602|gb|EFA15697.1| glutamate/aspartate periplasmic-binding protein, precursor
           [Serratia odorifera 4Rx13]
          Length = 276

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 85/244 (34%), Gaps = 6/244 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L  +             L  IK  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLLLIGMAGNVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+   +  A+         +++ LP+ ++ R   LQ+   D    +T   + R+     
Sbjct: 63  QDYSNQIVDAVKKKLNMPDLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K   +     L+G  + V +GTT+E+ L     +  M    I  
Sbjct: 122 -FSDTIFVVGTRLLVKKGSDVKDFKDLAGKPVVVTSGTTSEVLLNKLNDSGKMNMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +    +P +  IL    SK      + + D E
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEILGTPQSKEAYGCMLRKDDAE 240

Query: 237 WYNI 240
           + N 
Sbjct: 241 FKNW 244


>gi|300996649|ref|ZP_07181507.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 200-1]
 gi|300304478|gb|EFJ58998.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 200-1]
          Length = 325

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 53  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T     R+      F    +  G   +  K   I  
Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 171 FADLKGKAVVVTSGTTSEVFLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286


>gi|159794822|pdb|2IA4|B Chain B, Crystal Structure Of Novel Amino Acid Binding Protein From
           Shigella Flexneri
          Length = 280

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 86/241 (35%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 1   AAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 60

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K 
Sbjct: 61  DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 118

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L G ++ V +GTT+E+ L    +        I  +   +      + R  A+
Sbjct: 119 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKXNXRIISAKDHGDSFRTLESGRAVAF 178

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   +    +P    I+    S+      + + D ++  +   T   + T+ E 
Sbjct: 179 XXDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCXLRKDDPQFKKLXDDTIAQVQTSGEA 238

Query: 255 G 255
            
Sbjct: 239 E 239


>gi|107104181|ref|ZP_01368099.1| hypothetical protein PaerPA_01005254 [Pseudomonas aeruginosa PACS2]
 gi|254244037|ref|ZP_04937359.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192]
 gi|126197415|gb|EAZ61478.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192]
          Length = 299

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 95/235 (40%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDPSKI 78
           +  L  +   G +  G     V F+ +   +G   G+ V+    +   +         K+
Sbjct: 26  SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKSTLGKPELKV 85

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y  + ++ R   +Q+  +D+   +T  T  R+  +   F     +     +  K  GI+
Sbjct: 86  KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTRKDSGIA 143

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L G ++   AGTT E  L +Y   H +  + +  +   E     ++ R  A+  D 
Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           + LY  +    +P + V++ +  S+   +  + + D ++  +V+ T   +  + E
Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGE 258


>gi|300817825|ref|ZP_07098039.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 107-1]
 gi|331651668|ref|ZP_08352687.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           M718]
 gi|300529522|gb|EFK50584.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 107-1]
 gi|324016061|gb|EGB85280.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 117-3]
 gi|331049946|gb|EGI22004.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           M718]
          Length = 327

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|291281605|ref|YP_003498423.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|290761478|gb|ADD55439.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli
           O55:H7 str. CB9615]
          Length = 327

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|281600010|gb|ADA72994.1| putative periplasmic binding transport protein [Shigella flexneri
           2002017]
          Length = 327

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|15800369|ref|NP_286381.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H7 EDL933]
 gi|15829948|ref|NP_308721.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H7 str. Sakai]
 gi|30062157|ref|NP_836328.1| glutamate and aspartate transporter subunit [Shigella flexneri 2a
           str. 2457T]
 gi|56479704|ref|NP_706556.2| glutamate and aspartate transporter subunit [Shigella flexneri 2a
           str. 301]
 gi|82775933|ref|YP_402280.1| glutamate and aspartate transporter subunit [Shigella dysenteriae
           Sd197]
 gi|110804696|ref|YP_688216.1| glutamate and aspartate transporter subunit [Shigella flexneri 5
           str. 8401]
 gi|168752225|ref|ZP_02777247.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168758298|ref|ZP_02783305.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168767102|ref|ZP_02792109.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168777604|ref|ZP_02802611.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779146|ref|ZP_02804153.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786505|ref|ZP_02811512.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168802435|ref|ZP_02827442.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC508]
 gi|195939393|ref|ZP_03084775.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H7 str. EC4024]
 gi|208805792|ref|ZP_03248129.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816032|ref|ZP_03257211.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208823216|ref|ZP_03263534.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209399444|ref|YP_002269290.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209917916|ref|YP_002292000.1| glutamate and aspartate transporter subunit [Escherichia coli SE11]
 gi|254791819|ref|YP_003076656.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H7 str. TW14359]
 gi|261224124|ref|ZP_05938405.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257818|ref|ZP_05950351.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|307312629|ref|ZP_07592261.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|309786318|ref|ZP_07680944.1| glutamate/aspartate periplasmic-binding protein [Shigella
           dysenteriae 1617]
 gi|12513562|gb|AAG54989.1|AE005244_7 putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13360152|dbj|BAB34117.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|30040402|gb|AAP16134.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 2457T]
 gi|56383255|gb|AAN42263.2| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|81240081|gb|ABB60791.1| putative periplasmic binding transport protein [Shigella
           dysenteriae Sd197]
 gi|110614244|gb|ABF02911.1| putative periplasmic binding transport protein [Shigella flexneri 5
           str. 8401]
 gi|187767185|gb|EDU31029.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188013872|gb|EDU51994.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|189002825|gb|EDU71811.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189354868|gb|EDU73287.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363489|gb|EDU81908.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189373621|gb|EDU92037.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189375561|gb|EDU93977.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC508]
 gi|208725593|gb|EDZ75194.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732680|gb|EDZ81368.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208737409|gb|EDZ85093.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160844|gb|ACI38277.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209776908|gb|ACI86766.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209776910|gb|ACI86767.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209776912|gb|ACI86768.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209776914|gb|ACI86769.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209776916|gb|ACI86770.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209911175|dbj|BAG76249.1| glutamate/aspartate ABC transporter substrate binding component
           [Escherichia coli SE11]
 gi|254591219|gb|ACT70580.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Escherichia coli O157:H7
           str. TW14359]
 gi|306907331|gb|EFN37836.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|308925712|gb|EFP71193.1| glutamate/aspartate periplasmic-binding protein [Shigella
           dysenteriae 1617]
 gi|313649699|gb|EFS14123.1| glutamate/aspartate periplasmic-binding protein [Shigella flexneri
           2a str. 2457T]
 gi|315059910|gb|ADT74237.1| glutamate and aspartate transporter subunit [Escherichia coli W]
 gi|320193061|gb|EFW67701.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. EC1212]
 gi|320638106|gb|EFX07870.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H7 str. G5101]
 gi|320643510|gb|EFX12680.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H- str. 493-89]
 gi|320648845|gb|EFX17472.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H- str. H 2687]
 gi|320654429|gb|EFX22476.1| glutamate and aspartate transporter subunit [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320660111|gb|EFX27641.1| glutamate and aspartate transporter subunit [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664909|gb|EFX32044.1| glutamate and aspartate transporter subunit [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323184990|gb|EFZ70357.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           1357]
 gi|323379526|gb|ADX51794.1| extracellular solute-binding protein family 3 [Escherichia coli
           KO11]
 gi|326341405|gb|EGD65197.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. 1044]
 gi|326345815|gb|EGD69554.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. 1125]
          Length = 302

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|170020988|ref|YP_001725942.1| glutamate and aspartate transporter subunit [Escherichia coli ATCC
           8739]
 gi|188495638|ref|ZP_03002908.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           53638]
 gi|169755916|gb|ACA78615.1| extracellular solute-binding protein family 3 [Escherichia coli
           ATCC 8739]
 gi|188490837|gb|EDU65940.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           53638]
          Length = 302

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|172059651|ref|YP_001807303.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171992168|gb|ACB63087.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 297

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 92/258 (35%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + +  L        +     L  IK  G +  G     + F+    +    G+
Sbjct: 1   MKYHKAVLMVAALCAFASGVHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F   +  A+         +++ +P+ ++ R   +Q+  +DI   +T     R     
Sbjct: 61  SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  G+   + L G ++   AGTT+E  L        +  + I 
Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P E VI+    S+      + +GD 
Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +V      +  + E
Sbjct: 239 DFKKVVDDAISQVEKSGE 256


>gi|315299197|gb|EFU58451.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 16-3]
 gi|332104148|gb|EGJ07494.1| glutamate/aspartate periplasmic binding protein [Shigella sp. D9]
          Length = 325

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 53  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286


>gi|300931590|ref|ZP_07146902.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 187-1]
 gi|300460614|gb|EFK24107.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 187-1]
          Length = 327

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|300927239|ref|ZP_07142971.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 182-1]
 gi|301329186|ref|ZP_07222177.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 78-1]
 gi|300416805|gb|EFK00116.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 182-1]
 gi|300844474|gb|EFK72234.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 78-1]
          Length = 327

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|218699020|ref|YP_002406649.1| glutamate and aspartate transporter subunit [Escherichia coli
           IAI39]
 gi|256020607|ref|ZP_05434472.1| glutamate and aspartate transporter subunit [Shigella sp. D9]
 gi|293408781|ref|ZP_06652620.1| glutamate and aspartate transporter subunit [Escherichia coli B354]
 gi|218369006|emb|CAR16760.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli IAI39]
 gi|284920455|emb|CBG33516.1| glutamate/aspartate ABC transporter, substrate-binding protein
           [Escherichia coli 042]
 gi|291471959|gb|EFF14442.1| glutamate and aspartate transporter subunit [Escherichia coli B354]
 gi|323191287|gb|EFZ76551.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           RN587/1]
 gi|323976362|gb|EGB71452.1| extracellular solute-binding protein 3 [Escherichia coli TW10509]
          Length = 302

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|218894181|ref|YP_002443050.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254238211|ref|ZP_04931534.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719]
 gi|126170142|gb|EAZ55653.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719]
 gi|218774409|emb|CAW30226.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
          Length = 299

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 95/235 (40%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDPSKI 78
           +  L  +   G +  G     V F+ +   +G   G+ V+    +   +         K+
Sbjct: 26  SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKSTLGKPELKV 85

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y  + ++ R   +Q+  +D+   +T  T  R+  +   F     +     +  K  GI+
Sbjct: 86  KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTRKDSGIA 143

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L G ++   AGTT E  L +Y   H +  + +  +   E     ++ R  A+  D 
Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           + LY  +    +P + V++ +  S+   +  + + D ++  +V+ T   +  + E
Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGE 258


>gi|194439879|ref|ZP_03071942.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           101-1]
 gi|253774361|ref|YP_003037192.1| glutamate and aspartate transporter subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160734|ref|YP_003043842.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|194421173|gb|EDX37197.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           101-1]
 gi|242376428|emb|CAQ31130.1| gltI, subunit of GltIJKL glutamate ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253325405|gb|ACT30007.1| extracellular solute-binding protein family 3 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972635|gb|ACT38306.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|253976829|gb|ACT42499.1| glutamate and aspartate transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|323963223|gb|EGB58791.1| extracellular solute-binding protein 3 [Escherichia coli H489]
          Length = 302

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|207725321|ref|YP_002255717.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
 gi|206590556|emb|CAQ37518.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
          Length = 303

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 93/248 (37%), Gaps = 6/248 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            +     I+   T+ ++   +L  I+  G ++         F+   A+    G+ VD C 
Sbjct: 13  LLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCL 72

Query: 66  ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +   +  +      K+QY+ +    R   +   + D+    T     RE    +AF   
Sbjct: 73  RVVDKLRTELKRPDLKVQYVLVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFTIP 130

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y  G   ++    GI     L   ++    GTT+   +     +  +       +   +
Sbjct: 131 HYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHAD 190

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             A   + + DA+  D   LY+ +     P ++ ++ D+++  P A  + + D E+ + V
Sbjct: 191 AFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKHSV 250

Query: 242 SWTHYAMV 249
                A++
Sbjct: 251 DRAMTAII 258


>gi|83745767|ref|ZP_00942824.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|207743682|ref|YP_002260074.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
 gi|83727457|gb|EAP74578.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|206595081|emb|CAQ62008.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
          Length = 303

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 93/248 (37%), Gaps = 6/248 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            +     I+   T+ ++   +L  I+  G ++         F+   A+    G+ VD C 
Sbjct: 13  LLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCL 72

Query: 66  ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +   +  +      K+QY+ +    R   +   + D+    T     RE    +AF   
Sbjct: 73  RVVDKLRTELKRSDLKVQYVLVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFTIP 130

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y  G   ++    GI     L   ++    GTT+   +     +  +       +   +
Sbjct: 131 HYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHAD 190

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             A   + + DA+  D   LY+ +     P ++ ++ D+++  P A  + + D E+ + V
Sbjct: 191 AFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKHSV 250

Query: 242 SWTHYAMV 249
                A++
Sbjct: 251 DRAMTAII 258


>gi|296313420|ref|ZP_06863361.1| CjaA protein [Neisseria polysaccharea ATCC 43768]
 gi|296840052|gb|EFH23990.1| CjaA protein [Neisseria polysaccharea ATCC 43768]
          Length = 287

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 113/265 (42%), Gaps = 25/265 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTG 43
           M    K   +     I +  T+               S+ A+ +  IK++G ++ G+   
Sbjct: 1   MKLNAKLKALLASAAIAVGLTACGGGSSGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGD 60

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  V ANG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N
Sbjct: 61  KPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILAN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +  K K I+ ++QL   ++ V  GTT +     +
Sbjct: 121 FTKTPERAE--AVDFADPYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----F 174

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F  ++ +   + F++  E   A +  R  A   D + L+A     + P   V + ++   
Sbjct: 175 FTKNHPEVKLLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPDFEVAIGNLGPA 232

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAM 248
             +APA+ +G+ +  N V+    AM
Sbjct: 233 EFIAPAVQKGNADLLNWVNGEIAAM 257


>gi|331007193|ref|ZP_08330404.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
 gi|330418988|gb|EGG93443.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
          Length = 120

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282
           K PL P + QGD  W+N+V W+  AM+ AE L +   + +  +K + +P+ +R LG +  
Sbjct: 4   KEPLGPVVRQGDDAWFNVVRWSLMAMIEAEFLNVDSASADT-AKASGSPEQKRLLGAE-- 60

Query: 283 SNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GE LGL++DW + I++ +GNY E F+RN+G+ S LKI RG NA W+KGG++Y+ PIR
Sbjct: 61  GGAGEKLGLSEDWAFNIVKQVGNYSESFERNVGSGSALKIARGLNAQWNKGGILYSSPIR 120


>gi|254247735|ref|ZP_04941056.1| Extracellular solute-binding protein, family 10 [Burkholderia
           cenocepacia PC184]
 gi|124872511|gb|EAY64227.1| Extracellular solute-binding protein, family 10 [Burkholderia
           cenocepacia PC184]
          Length = 342

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +    A  L  I++   +  G     V F+ V A G   GF  D
Sbjct: 49  RPLLVAACALACGASVAAEPLAGTLEKIRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 108

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 109 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 166

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 167 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 226

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  ++    S       + + D ++ 
Sbjct: 227 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 286

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 287 ALVDGVLVQLMKSGEIN 303


>gi|288550055|ref|ZP_05969127.2| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316573|gb|EFC55511.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 316

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 92/259 (35%), Gaps = 10/259 (3%)

Query: 3   KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    ++L + +      +       S L  I K G +  G     V F+         G
Sbjct: 19  RKLATAMLVMGMSAGVVHAEDAPAAGSTLAKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   L R+   
Sbjct: 79  YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G   +  K   I   + L G ++ V +GTT+E+ L        M    I
Sbjct: 139 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDDKKMDMRII 196

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + L   +    +P    I+    SK      + + D
Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDD 256

Query: 235 TEWYNIVSWTHYAMVTAEE 253
            ++  ++  T     T+ E
Sbjct: 257 ADFKKLIDDTIAQAQTSGE 275


>gi|229593102|ref|YP_002875221.1| putative ABC transporter substrate-binding exported protein
           [Pseudomonas fluorescens SBW25]
 gi|229364968|emb|CAY53090.1| putative ABC transport system, substrate-binding exported protein
           [Pseudomonas fluorescens SBW25]
          Length = 300

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 10/263 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56
           M K         ++L   + +  A     LG I     +  G     V F+ V   +G  
Sbjct: 1   MKKILLAGCTLGLLLGAQAHANPAPLDGTLGKIANAQSITLGYRDASVPFSYVGDNSGKP 60

Query: 57  KGFDVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+ V+    +   I          ++Y  + ++ R   +Q+  +D+   +T  T  R+ 
Sbjct: 61  MGYSVELADKIVERIRQKTGVATLNVKYTLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +   F     +     +  K  GI   + L+G ++   AGTT E  L  Y   H     
Sbjct: 121 QVA--FSYGFIYVKGQLLTAKDSGIQGFADLAGKNVVTTAGTTNERFLKSYNAEHKANMF 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   E        R  A+  D + LY  +     P   V++ +  S+   +  + +
Sbjct: 179 VISAKDHGEAFKMLETGRAAAFYMDDALLYGERAKAKDPHNWVVVGEEQSREIYSCMVRK 238

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D+++  +V+ T   +  + E+ 
Sbjct: 239 DDSQFLAVVNETLGDLYRSGEIN 261


>gi|26246629|ref|NP_752669.1| glutamate and aspartate transporter subunit [Escherichia coli
           CFT073]
 gi|91209696|ref|YP_539682.1| glutamate and aspartate transporter subunit [Escherichia coli
           UTI89]
 gi|117622864|ref|YP_851777.1| glutamate and aspartate transporter subunit [Escherichia coli APEC
           O1]
 gi|227884372|ref|ZP_04002177.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, periplasmic glutamate/aspartate-binding
           protein [Escherichia coli 83972]
 gi|237707378|ref|ZP_04537859.1| glutamate/aspartate periplasmic binding protein [Escherichia sp.
           3_2_53FAA]
 gi|300989986|ref|ZP_07179062.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 45-1]
 gi|301049845|ref|ZP_07196784.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 185-1]
 gi|26107028|gb|AAN79212.1|AE016757_116 Glutamate/aspartate Periplasmic binding protein precursor
           [Escherichia coli CFT073]
 gi|91071270|gb|ABE06151.1| glutamate/aspartate periplasmic binding protein precursor
           [Escherichia coli UTI89]
 gi|115511988|gb|ABJ00063.1| Glutamate/aspartate Periplasmic binding protein precursor
           [Escherichia coli APEC O1]
 gi|226898588|gb|EEH84847.1| glutamate/aspartate periplasmic binding protein [Escherichia sp.
           3_2_53FAA]
 gi|227838458|gb|EEJ48924.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, periplasmic glutamate/aspartate-binding
           protein [Escherichia coli 83972]
 gi|300298397|gb|EFJ54782.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 185-1]
 gi|300407261|gb|EFJ90799.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 45-1]
 gi|315287098|gb|EFU46512.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 110-3]
 gi|315292077|gb|EFU51429.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 153-1]
 gi|324006272|gb|EGB75491.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 57-2]
 gi|324010380|gb|EGB79599.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 60-1]
          Length = 325

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 53  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T     R+      F    +  G   +  K   I  
Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286


>gi|110640877|ref|YP_668605.1| glutamate and aspartate transporter subunit [Escherichia coli 536]
 gi|191173985|ref|ZP_03035503.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           F11]
 gi|215485688|ref|YP_002328119.1| glutamate and aspartate transporter subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218557586|ref|YP_002390499.1| glutamate and aspartate transporter subunit [Escherichia coli S88]
 gi|306812920|ref|ZP_07447113.1| glutamate and aspartate transporter subunit [Escherichia coli
           NC101]
 gi|312965095|ref|ZP_07779332.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           2362-75]
 gi|331682072|ref|ZP_08382696.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           H299]
 gi|110342469|gb|ABG68706.1| glutamate/aspartate periplasmic binding protein precursor
           [Escherichia coli 536]
 gi|190905761|gb|EDV65382.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           F11]
 gi|215263760|emb|CAS08096.1| glutamate and aspartate transporter subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218364355|emb|CAR02030.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli S88]
 gi|222032408|emb|CAP75147.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           LF82]
 gi|294492965|gb|ADE91721.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           IHE3034]
 gi|305853683|gb|EFM54122.1| glutamate and aspartate transporter subunit [Escherichia coli
           NC101]
 gi|307552518|gb|ADN45293.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           ABU 83972]
 gi|307627914|gb|ADN72218.1| glutamate and aspartate transporter subunit [Escherichia coli
           UM146]
 gi|312290186|gb|EFR18069.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           2362-75]
 gi|312945195|gb|ADR26022.1| glutamate and aspartate transporter subunit [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|320194170|gb|EFW68802.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli WV_060327]
 gi|323952774|gb|EGB48642.1| extracellular solute-binding protein 3 [Escherichia coli H252]
 gi|323958407|gb|EGB54113.1| extracellular solute-binding protein 3 [Escherichia coli H263]
 gi|331080751|gb|EGI51925.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           H299]
          Length = 302

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T     R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|295677664|ref|YP_003606188.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295437507|gb|ADG16677.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 297

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 97/258 (37%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + ++  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAHAQDSGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D+      A+   +     K++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 61  SQDYAVKIVEAVKQKLNMPNLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  GI     L G ++   AGTT+E  L    +  NM  + I 
Sbjct: 119 AAFTNTIFVIGTRLMTKKDSGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  +  P++ VI+    S+      + + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSSNPNDFVIVGTPQSREAYGCMLRKNDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +       +  + E
Sbjct: 239 DFKKVADDAIAKVQLSSE 256


>gi|146296044|ref|YP_001179815.1| extracellular solute-binding protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409620|gb|ABP66624.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 267

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 92/250 (36%), Gaps = 13/250 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K   + +L L I  F S  +N     S L  IK+      G++           N +  
Sbjct: 4   KKLITICLLVLFIATFLSGCSNKNQNISTLQKIKQNKEFVVGMDNTFPPMEFTDDNNNTV 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD    ++  +    +K++ + ++      AL+SK+ D +      T  R+ +  L 
Sbjct: 64  GFDVDLANEIAKRLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFNL- 119

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                 +  Q   + K    I S   L G  I VQA TT +  +    K  N +     +
Sbjct: 120 -AGPYLYIRQVIAVKKGDTSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVTRY 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ER+ +        R  A   D   + A       P +  I P  + K P+  A+ + D +
Sbjct: 178 ERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAELEKEPVGIALRKEDKD 235

Query: 237 WYNIVSWTHY 246
            Y  +     
Sbjct: 236 LYEEIQKILN 245


>gi|206560608|ref|YP_002231373.1| periplasmic glutamate/aspartate-binding protein [Burkholderia
           cenocepacia J2315]
 gi|198036650|emb|CAR52548.1| periplasmic glutamate/aspartate-binding protein [Burkholderia
           cenocepacia J2315]
          Length = 306

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 94/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +    +  L  I++   +  G     V F+ V A+G   GF  D
Sbjct: 13  RSLLVAACVLACGASVAAEPLSGTLEKIRQANLISIGHRETSVPFSYVDASGKVIGFSQD 72

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 73  LCERVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  ++    S       + + D ++ 
Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWRLVGTPQSSEAYGFMLRKDDPQFK 250

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 251 ALVDGVLVQLMKSGEID 267


>gi|331656675|ref|ZP_08357637.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA206]
 gi|331054923|gb|EGI26932.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA206]
          Length = 302

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIIEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|15596539|ref|NP_250033.1| binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|218892553|ref|YP_002441422.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254234461|ref|ZP_04927784.1| hypothetical protein PACG_00313 [Pseudomonas aeruginosa C3719]
 gi|254239713|ref|ZP_04933035.1| hypothetical protein PA2G_00337 [Pseudomonas aeruginosa 2192]
 gi|9947282|gb|AAG04731.1|AE004563_8 probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|126166392|gb|EAZ51903.1| hypothetical protein PACG_00313 [Pseudomonas aeruginosa C3719]
 gi|126193091|gb|EAZ57154.1| hypothetical protein PA2G_00337 [Pseudomonas aeruginosa 2192]
 gi|218772781|emb|CAW28566.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
          Length = 302

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
               + +   +L     +      L  IK+ G +  G     + F+ +    G   G+  
Sbjct: 6   SLLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHRDASIPFSYLGTEPGKPIGYSH 65

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     K++Y  + ++ R   +Q+  +DI   +T     R+    + 
Sbjct: 66  DLQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K   I     L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + LY       +P + V+     S       + +GD  +
Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
             +V         + E+ 
Sbjct: 244 KKVVDKAITDTYASGEVN 261


>gi|313106334|ref|ZP_07792576.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
 gi|310879078|gb|EFQ37672.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
          Length = 349

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
               + +   +L     +      L  IK  G +  G     + F+ +    G   G+  
Sbjct: 53  SLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGTEPGKPIGYSH 112

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     K++Y  + ++ R   +Q+  +DI   +T     R+    + 
Sbjct: 113 DLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 170

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K   I     L G ++   AGTT+E  L        M  + I  +
Sbjct: 171 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 230

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + LY       +P + V+     S       + +GD  +
Sbjct: 231 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 290

Query: 238 YNIVSWTHYAMVTAEELG 255
             +V         + E+ 
Sbjct: 291 KKVVDKAITDTYASGEVN 308


>gi|49084568|gb|AAT51210.1| PA1342 [synthetic construct]
          Length = 303

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
               + +   +L     +      L  IK+ G +  G     + F+ +    G   G+  
Sbjct: 6   SLLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHRDASIPFSYLGTEPGKPIGYSH 65

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     K++Y  + ++ R   +Q+  +DI   +T     R+    + 
Sbjct: 66  DLQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K   I     L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + LY       +P + V+     S       + +GD  +
Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
             +V         + E+ 
Sbjct: 244 KKVVDKAITDTYASGEVN 261


>gi|261400798|ref|ZP_05986923.1| CjaA protein [Neisseria lactamica ATCC 23970]
 gi|269209400|gb|EEZ75855.1| CjaA protein [Neisseria lactamica ATCC 23970]
          Length = 284

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           +K    S    + L              S+ A+ +  IK++G ++ G+      F  V A
Sbjct: 7   FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDA 66

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R  
Sbjct: 67  NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I+ ++QL   ++ V  GTT +     +F   + +  
Sbjct: 127 --AVDFADPYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F++  E   A +  R  A   D + L+A     + P   V + ++     +APA+ +
Sbjct: 181 LLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPDFEVAIGNLGPAEFIAPAVQK 238

Query: 233 GDTEWYNIVSWTHYAM 248
           G+ +  N V+    AM
Sbjct: 239 GNADLLNWVNGEIAAM 254


>gi|59802322|ref|YP_209034.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae FA 1090]
 gi|239999903|ref|ZP_04719827.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae 35/02]
 gi|240015593|ref|ZP_04722133.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae FA6140]
 gi|240081799|ref|ZP_04726342.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae FA19]
 gi|240114683|ref|ZP_04728745.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae PID18]
 gi|240122519|ref|ZP_04735475.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae PID332]
 gi|240126633|ref|ZP_04739519.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae SK-92-679]
 gi|240127229|ref|ZP_04739890.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae SK-93-1035]
 gi|260441510|ref|ZP_05795326.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae DGI2]
 gi|291044873|ref|ZP_06570582.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293397951|ref|ZP_06642157.1| glutamine transport system substrate-binding protein [Neisseria
           gonorrhoeae F62]
 gi|59719217|gb|AAW90622.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae FA 1090]
 gi|291011767|gb|EFE03763.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611897|gb|EFF40966.1| glutamine transport system substrate-binding protein [Neisseria
           gonorrhoeae F62]
 gi|317165198|gb|ADV08739.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 284

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46
           M      K    S    + L              S+ A+ +  IK++G ++ G+      
Sbjct: 1   MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V ANG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   
Sbjct: 61  FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQ 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R     + F         G +  K K I+ ++QL   ++ V  GTT +     +F  
Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + F++  E   A +  R  A   D + L+A     + P+  V + ++     +
Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           APA+ +G+ +  N V+    AM
Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254


>gi|240013150|ref|ZP_04720063.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae DGI18]
 gi|240116885|ref|ZP_04730947.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae PID1]
 gi|240120221|ref|ZP_04733183.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae PID24-1]
          Length = 284

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46
           M      K    S    + L              S+ A+ +  IK++G ++ G+      
Sbjct: 1   MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V ANG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   
Sbjct: 61  FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQ 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R     + F         G +  K K I+ ++QL   ++ V  GTT +     +F  
Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + F++  E   A +  R  A   D + L+A     + P+  V + ++     +
Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           APA+ +G+ +  N V+    AM
Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254


>gi|194017138|ref|ZP_03055750.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061]
 gi|194011006|gb|EDW20576.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061]
          Length = 269

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 99/266 (37%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---------ASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +   +  +   I    +  +           S L  I+K   +  G+      F    
Sbjct: 4   MKRFGLLLFMTCCIAALAACGSAEKGSTDAKKGSSLEAIQKDKKIIFGVKNDTRLFGLKN 63

Query: 52  A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             NGD +GFD+D  +A++  +  D  K ++  + +K R   LQ   I  +      T  R
Sbjct: 64  PSNGDIEGFDIDIAKAIAKEMLGDEGKAEFKEVTSKTRIPLLQKGDIHAIVATMTITEER 123

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNM 169
           +    + F  + +  GQ  ++ K   I S+  L  G  +    G+T+   + +       
Sbjct: 124 KK--EVNFSDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPEA-- 179

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + FE  +E   A ++++    T D + L+ +    D  S + ++    +  P   A
Sbjct: 180 --SVLEFENYQEAFTALKSNQGQVLTTDNAILFGM---ADEDSNYEVVGGTFTDEPYGIA 234

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +GD +    ++     +    E  
Sbjct: 235 VKKGDQKLTAAINKALKTLKGNGEYD 260


>gi|188025731|ref|ZP_02959612.2| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827]
 gi|188020278|gb|EDU58318.1| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827]
          Length = 295

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 90/249 (36%), Gaps = 7/249 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S++ L              L  I   G +  G     V F+    N    G+ 
Sbjct: 1   MSK-IVLSMMVLGATCAVQAEELTGTLKKINDNGVIVVGHRESSVPFSYYDNNQKVVGYS 59

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D+   +  A+         +++ +P+ ++ R   LQ+   D    +T   L R+     
Sbjct: 60  QDYSNEIVDAVKKKLNKPNLEVKLIPITSQNRIPLLQNGTYDFECGSTTNNLERQKQAA- 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +     G+   + L+G ++ V +GTT+E+ L       NMK   I  
Sbjct: 119 -FSNTIFVVGTRLLTKNDSGVKDFADLAGKNVVVTSGTTSEILLNKLNDEKNMKMRIISA 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +    +P    I+    ++      + + D +
Sbjct: 178 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQ 237

Query: 237 WYNIVSWTH 245
           +  +V  T 
Sbjct: 238 FKALVDETI 246


>gi|73540102|ref|YP_294622.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72117515|gb|AAZ59778.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 302

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 93/261 (35%), Gaps = 9/261 (3%)

Query: 2   YKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
              F    L   +    + +     +  L  IK  G +  G  T  + F+   +N    G
Sbjct: 5   KATFLCLALAASLPAGLAHAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDSNQKVIG 64

Query: 59  FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           F  D C  + + +    ++    ++ +P+ ++ R   +Q+  +D+    T     R    
Sbjct: 65  FSQDLCDRVVNEVKKQTNQPNLQVRMVPVTSQNRISLVQNGTVDLECGVTTNLKSR--QQ 122

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF    +  G   ++ K   +   S LSG ++   AGTT+E  L              
Sbjct: 123 QVAFSTTFFVAGTRLLVKKGSPVHDFSDLSGKAVVTNAGTTSERILRRLNDEKKANITIQ 182

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E     ++ R  A+  D   L   +     P+E V++    S       + + D
Sbjct: 183 SAKDYGESFLILQSGRVAAFMMDDVLLSGARTLAPNPAEWVVVGTPQSFEAYGFMLRKDD 242

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +V      ++ + E+ 
Sbjct: 243 PGFKQLVDGVLTGLMKSGEIN 263


>gi|312876440|ref|ZP_07736424.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796798|gb|EFR13143.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 266

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           MYK     V ++ L I F +  S    N + L  IKK      G++           N +
Sbjct: 1   MYKKAIALVLLIALFIPFLSGCSLNNQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD    ++  +    +K++ + ++      AL+SK+ D +      T  R+ +  
Sbjct: 61  TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           L       +  Q   + K    I S   L G  I VQA TT +  +    K  N +    
Sbjct: 118 L--AGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVT 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +ER+ +        R  A   D   + A       P +  I P  + + P+  A+ + D
Sbjct: 175 RYERITDAFNDLNIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVVIALRKED 232

Query: 235 TEWYNIVSWTH 245
            + YN +    
Sbjct: 233 KDLYNEIQKIL 243


>gi|255528450|ref|ZP_05395244.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|255507856|gb|EET84302.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
          Length = 270

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 22/256 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAE 49
           M K     ++ +  + LF     +N+           L  +K  G LK G++        
Sbjct: 3   MKKISALVLTAVMAMSLFAGCGKSNSGTSTNQKTDNSLQKVKDAGVLKIGLDDSYPPMEF 62

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                +  GFD+D  + L+  +      +     +     LAL+S + D +      T  
Sbjct: 63  RDEKNELAGFDIDMGKELAKKLGVKYEPVT---TDFNGIVLALKSGKFDAIIAAMSITDE 119

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F       GQ  I+     I   + L G ++  Q G+T E        A   
Sbjct: 120 RKK--EIDFVGPYIDGGQIIIVKNSSAIQGKADLKGKTLAAQLGSTGEQAANKIEGAK-- 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 +++V E        R DA   D         T      + IL + ++K P    
Sbjct: 176 --EVKKYDKVTEAFHDLSIGRVDALIVD--GQVGGYYTKKEAGTYKILTEKLTKEPEGIG 231

Query: 230 IIQGDTEWYNIVSWTH 245
           + + + E  + +    
Sbjct: 232 VKKENKELKDALQKAL 247


>gi|66045410|ref|YP_235251.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256117|gb|AAY37213.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 304

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 9/257 (3%)

Query: 6   FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62
            + +   + L  T+         L  IK  G +  G     + F+ +   +G   G+  D
Sbjct: 7   ILGVTLTVALSSTALMAAEPTGTLKKIKTSGTITLGHRDSSIPFSYMADGSGQPMGYSHD 66

Query: 63  F----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
                  A+   +      ++Y  + ++ R   +Q+  +D+   +T  T  R     + F
Sbjct: 67  IQLKIVEAIKQELGMPKLNVRYNLVTSQTRIPLVQNGTVDLECGSTTNTAERAR--QVDF 124

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      ++ K         L+G ++   AG+T E  L        M  + I  + 
Sbjct: 125 SVGIFEASTRLLVRKDSVYKDFQDLNGKNVVTTAGSTAERMLKVMNAEKKMNMNVISAKD 184

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + E      + R  A+  D + L        +P + V+     S       + +GD +  
Sbjct: 185 IGESYQMLESGRAIAFMQDDALLAGEMAKAKKPEDWVVTGTPQSNEIYGCTMRRGDPDLK 244

Query: 239 NIVSWTHYAMVTAEELG 255
            +V  +  ++  + E+ 
Sbjct: 245 KVVDDSIKSLFVSGEIN 261


>gi|218688471|ref|YP_002396683.1| glutamate and aspartate transporter subunit [Escherichia coli ED1a]
 gi|218426035|emb|CAR06852.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli ED1a]
          Length = 302

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T     R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSNTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|170695393|ref|ZP_02886539.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170139793|gb|EDT07975.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 297

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 100/260 (38%), Gaps = 7/260 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + +A  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVIALGHRESSIPFSYYDDKQEVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +F      A+   +     K++ +P+ ++ R   +Q+  +D+   +T     R     
Sbjct: 61  SQEFALKVVEAVKQKLNAPNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF    +  G   +  K  GI   + L G ++   AGTT+E  L    +  ++  + I 
Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSLGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +  ++ P++ VI+    S       + + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNTPNDFVIVGAPQSHEAYGCMLRKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E+  +V      + T+ E  
Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258


>gi|107028647|ref|YP_625742.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116690194|ref|YP_835817.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105897811|gb|ABF80769.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116648283|gb|ABK08924.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 306

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 93/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +    A  L  +++   +  G     V F+ V A G   GF  D
Sbjct: 13  RPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 72

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 73  LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  ++    S       + + D ++ 
Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 250

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 251 ALVDGVLVQLMKSGEIN 267


>gi|300692905|ref|YP_003753900.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum PSI07]
 gi|299079965|emb|CBJ52642.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum PSI07]
          Length = 301

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 8/255 (3%)

Query: 7   VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           +++   I          A    L  I+    +  G+    + F+   +     GF  D C
Sbjct: 10  IALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIIGFSADLC 69

Query: 65  RALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
             +       +     ++Q +P+ ++ R   +Q+  +D+    T     RE     AF  
Sbjct: 70  ARVIDVVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFST 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      + +   G+     L+G S+   AGTT+E  L        M  + I  +   
Sbjct: 128 TFFIAATRLLTNVNSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYG 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E     ++ R  A+  D   L   +    +P++ V+     S       + + D ++  +
Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVAGTPQSFEAYGFMLRRDDPQFKKL 247

Query: 241 VSWTHYAMVTAEELG 255
           V  T   ++   E+ 
Sbjct: 248 VDDTLTGIMKRGEIN 262


>gi|296391932|ref|ZP_06881407.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAb1]
 gi|313110121|ref|ZP_07796023.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
 gi|310882525|gb|EFQ41119.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
          Length = 299

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 95/235 (40%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDPSKI 78
           +  L  +   G +  G     V F+ +   +G   G+ V+    +   +         K+
Sbjct: 26  SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELAGKVVERLKSTLGKPELKV 85

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y  + ++ R   +Q+  +D+   +T  T  R+  +   F     +     +  K  GI+
Sbjct: 86  KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTRKDSGIA 143

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L G ++   AGTT E  L +Y   H +  + +  +   E     ++ R  A+  D 
Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           + LY  +    +P + V++ +  S+   +  + + D ++  +V+ T   +  + E
Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGE 258


>gi|206579054|ref|YP_002239696.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Klebsiella
           pneumoniae 342]
 gi|288936538|ref|YP_003440597.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|206568112|gb|ACI09888.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Klebsiella
           pneumoniae 342]
 gi|288891247|gb|ADC59565.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 303

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 90/263 (34%), Gaps = 15/263 (5%)

Query: 4   DFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
                   ++++  T+          +   S L  I K G +  G     V F+      
Sbjct: 2   QLRKLAAAMLVMGVTAGLAHAEDAAPAAGQSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ 61

Query: 55  DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+  D+  A+  AI         +++ +P+ ++ R   LQ+   D    +T   L R
Sbjct: 62  KVVGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLER 121

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F    +  G   ++ K   I     L   ++ V +GTT+E+ L        M 
Sbjct: 122 QKQAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMN 179

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   +      + R  A+  D + L   +    +P    I+    SK      +
Sbjct: 180 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCML 239

Query: 231 IQGDTEWYNIVSWTHYAMVTAEE 253
            + D  +  +V  T     T+ E
Sbjct: 240 RKDDPSFKALVDETVAQAQTSGE 262


>gi|268595712|ref|ZP_06129879.1| antigenic protein [Neisseria gonorrhoeae 35/02]
 gi|268597898|ref|ZP_06132065.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268549101|gb|EEZ44519.1| antigenic protein [Neisseria gonorrhoeae 35/02]
 gi|268551686|gb|EEZ46705.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
          Length = 282

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 17/255 (6%)

Query: 3   KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           K    S    + L              S+ A+ +  IK++G ++ G+      F  V AN
Sbjct: 6   KALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDAN 65

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R   
Sbjct: 66  GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAE- 124

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +  K K I+ ++QL   ++ V  GTT +     +F   + +   
Sbjct: 125 -AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKL 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F++  E   A +  R  A   D + L+A     + P+  V + ++     +APA+ +G
Sbjct: 180 LKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQKG 237

Query: 234 DTEWYNIVSWTHYAM 248
           + +  N V+    AM
Sbjct: 238 NADLLNWVNGEIAAM 252


>gi|306825704|ref|ZP_07459043.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432065|gb|EFM35042.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 273

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 10  MKKKFFLSALLISLFSLVAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 70  GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K  ++ +  +   
Sbjct: 125 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLTFKFVELG 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 239

Query: 238 YNIVSWTHYAMV 249
            + +       +
Sbjct: 240 NDYLDTLVTKWI 251


>gi|242238549|ref|YP_002986730.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242130606|gb|ACS84908.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 298

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 7/236 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80
             L  +K  G +  G     V F+         G+  D       A+  A+     +++ 
Sbjct: 28  PTLQKVKDSGVIVIGHRESSVPFSYYDNQQKVVGYSQDYSDKIVEAVKKAVNAPNLQVKL 87

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+   D+   +T   L R      AF    +  G   +  K   I   
Sbjct: 88  IPITSQNRIPLLQNGTFDLECGSTTNNLER--QQQAAFSNTIFVIGTRLLTKKGSDIKDF 145

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           S L+G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D + 
Sbjct: 146 SDLNGKAVVVTSGTTSEILLNKMNEEKKMNLRIISAKDHGDSFRTLESGRAVAFMMDDAL 205

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH-YAMVTAEELG 255
           L   +     P E VI+    S       + + D E+  +V  T   A  + E + 
Sbjct: 206 LAGERAKAKNPDEWVIVGTPQSHEAYGCMLRKNDPEFKKLVDDTIAQAQTSGEAVK 261


>gi|237730633|ref|ZP_04561114.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2]
 gi|226906172|gb|EEH92090.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2]
          Length = 317

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + + +      S L  I K G +  G     V F+         
Sbjct: 19  RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 78

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   + R+  
Sbjct: 79  GYSQDYSNAIVDAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 138

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   +   + L G ++ V +GTT+E+ L    +   M    
Sbjct: 139 AA--FSDTIFVVGTRLLAKKGGDVKDFADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRI 196

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 197 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKD 256

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+  ++  T     T+ E  
Sbjct: 257 DPEFKKLMDDTIAKAQTSGEAE 278


>gi|322377820|ref|ZP_08052309.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
 gi|321281243|gb|EFX58254.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
          Length = 296

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 33  MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 92

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 93  GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 147

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 148 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 207

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 208 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEL 262

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 263 NDYLDNLVTKW 273


>gi|283784426|ref|YP_003364291.1| glutamate/aspartate ABC transporter, substrate-binding protein
           [Citrobacter rodentium ICC168]
 gi|282947880|emb|CBG87442.1| glutamate/aspartate ABC transporter, substrate-binding protein
           [Citrobacter rodentium ICC168]
          Length = 302

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 94/260 (36%), Gaps = 11/260 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + + +      S L  I K G +  G     V F+         
Sbjct: 4   RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   + R+  
Sbjct: 64  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I   + L G ++ V +GTT+E+ L        M    
Sbjct: 124 AA--FSNTIFVVGTRLLAKKGGDIKDFADLKGKAVVVTSGTTSEILLHKLNDEQKMDMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSEEAYGCMLRKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEE 253
           D E+  ++  T     T+ E
Sbjct: 242 DPEFKKLMDETIAQAQTSGE 261


>gi|154483455|ref|ZP_02025903.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC
           27560]
 gi|149735707|gb|EDM51593.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC
           27560]
          Length = 295

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 28/263 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------------TSFSTNASILGDIKKRGFLKCGI 40
           M K     +L + I+                       S +  A  + +IKK G +K G+
Sbjct: 1   MKKKILGVLLVVGIIAGVIAGCGNSNTTQNGAENASQASATAKARTIDEIKKSGKIKIGV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
            +    F  V  NG  +G+DV F + ++  +      + ++ + A  R   L+S ++DI 
Sbjct: 61  FSDKNPFGYVDENGKVQGYDVYFAKRIAKDLLGSEDAVDFVYVEAASRVEYLKSAKVDIT 120

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G +  +K  I+ V+QL G  + V  GTT E   
Sbjct: 121 LANFTVTDERKE--QVDFALPYMKVALGIVSPQKAEITDVNQLKGKKLIVVKGTTAETY- 177

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
              F  +      + F+  +E   A    R DA++ D + + A           V +  +
Sbjct: 178 ---FSKNYPDVTLVKFDEYQEAYDALLDGRGDAFSTDNTEVLAWAKQ--NKGFVVGVESL 232

Query: 221 ISKSPLAPAIIQGDTEWYNIVSW 243
                +APA+ +G+TE  N ++ 
Sbjct: 233 GDIDTIAPAVQKGNTELLNWLND 255


>gi|303253934|ref|ZP_07340055.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS455]
 gi|302599110|gb|EFL66135.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS455]
          Length = 264

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L             V+L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDTLVTKW 241


>gi|73542047|ref|YP_296567.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72119460|gb|AAZ61723.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 311

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 19/259 (7%)

Query: 11  CLIILFFTSFST------------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            +++L   S +              A +L  I++ G ++       V F+ V A+G   G
Sbjct: 15  AVLVLSSLSCAAMLATGAASAGAATAPVLNHIQQTGVIRIAHRESSVPFSFV-ADGKPVG 73

Query: 59  FDVDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + VD C  ++ A    +     +++++P+    R  A+   + D+   +T     RE   
Sbjct: 74  YAVDLCLKIADAVRTSLHLPGLRVEWVPVTPANRIPAIVEGKADLECGSTTNN--RERRE 131

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF    Y  G   I+    GIS  + L G ++   +GTT    L    +   M++  +
Sbjct: 132 QVAFTIPHYIAGSRMIVKTDSGISKWADLRGKTVVSTSGTTPLAMLRKMDEGKVMQWRLV 191

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +  A   A + DA+  D   LY L+    RP +  +  ++++  P A  + + D
Sbjct: 192 EAKDHAQAFAMVEAGKADAFVMDDVLLYGLRANASRPGDFKVTGEMLTIEPYAIMLSKSD 251

Query: 235 TEWYNIVSWTHYAMVTAEE 253
            E+  +V  T  A V  +E
Sbjct: 252 PEFKKLVDKTLIAAVYDQE 270


>gi|307704349|ref|ZP_07641266.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK597]
 gi|307622109|gb|EFO01129.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK597]
          Length = 264

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITEERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K  ++K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L             V+L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|163791025|ref|ZP_02185446.1| amino acid ABC transporter, amino acid-binding protein
           [Carnobacterium sp. AT7]
 gi|159873670|gb|EDP67753.1| amino acid ABC transporter, amino acid-binding protein
           [Carnobacterium sp. AT7]
          Length = 273

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 22/263 (8%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVG 46
           M K     +++   +LF  + S++                +  IK+ G LK G+   +  
Sbjct: 1   MKKRNLLATVVLSSVLFLGACSSDDDATKAGTTNNSDQVTVESIKEAGVLKVGVKEDVPN 60

Query: 47  FAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           F     + G+ +GF++D  + L+  I  DP  I+  P+ AK R   L + ++D++     
Sbjct: 61  FGLKNTDTGEIEGFEIDIAKKLAEEILGDPDAIELTPVTAKTRGPLLDNGEVDMIIATFT 120

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T  R+ +    F    Y D  G ++ K K    +  + GA+I V   +TT   +    +
Sbjct: 121 VTEERKET--YNFTDAYYEDAVGLLVKKDKNYEGLKDMDGATIGVSQSSTTAEAIEAEAE 178

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
            +++      +    EI AA  + R DA++ D S L              IL D  +   
Sbjct: 179 KYDIAIDFSEYATYPEIKAALDSGRVDAFSVDRSILAGYL-----DDSTEILSDRFATQD 233

Query: 226 LAPAIIQGDTEWYNIVSWTHYAM 248
              A  + +TE  +  +      
Sbjct: 234 YGIATKKTNTELADYTNDLITTW 256


>gi|209517530|ref|ZP_03266370.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209502063|gb|EEA02079.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 297

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 7/258 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L +    + + ++  L  IK  G +  G     + F+      +  G+
Sbjct: 1   MKIKKAALLLATLGLFTVGAHAQDSGTLKKIKDTGVISLGHRESSIPFSFYDDKQNVIGY 60

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D+      A+   +     K++ +P+ ++ R   +Q+  +DI   +T   L R     
Sbjct: 61  SQDYALKIVEAVKQKLNMPNLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF    +  G   +  K  GI     L G ++   AGTT+E  L    +  +M  + I 
Sbjct: 119 AAFTNTIFVIGTRLMTKKDSGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E        R  A+  D + L   +     P + VI+    S+      + + D 
Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKASNPGDFVIVGTPQSREAYGCMLRKNDA 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           ++  +       +  + E
Sbjct: 239 DFKKVADDAIAKVQLSSE 256


>gi|306829074|ref|ZP_07462264.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus mitis ATCC 6249]
 gi|304428160|gb|EFM31250.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus mitis ATCC 6249]
          Length = 264

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFSLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLSKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S   L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 116 FTSPYYTDASGFLVNKSANIKSFEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAMV 249
            + +        
Sbjct: 231 NDYLDTLVTKWT 242


>gi|307130055|ref|YP_003882071.1| glutamate/aspartate ABC transporter periplasmic-binding protein
           [Dickeya dadantii 3937]
 gi|306527584|gb|ADM97514.1| periplasmic-binding component of an ABC superfamily
           glutamate/aspartate transporter [Dickeya dadantii 3937]
          Length = 307

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 17/266 (6%)

Query: 3   KDFFVSILCLIILFFTS----FSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVK 51
           +   +S++ +      +     + +A         L  +K  G +  G     V F+   
Sbjct: 4   RKLALSVMLISTTATMAYAEEQAASAPKEDKSVPTLKKVKDSGVIVIGHRESSVPFSYYD 63

Query: 52  ANGDWKGFDVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G+          A+  A+     +++ LP+ ++ R   LQ+   D+   +T   
Sbjct: 64  NQQKVVGYSQAYSDKIVEAVKKAVGAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNN 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           L R      AF    +  G   +  K  GI   + L+G ++ V +GTT+E+ L    +  
Sbjct: 124 LER--QQQAAFSNTIFVIGTRLLTKKDSGIKDFTDLNGKAVVVTSGTTSEVLLNKMNEEK 181

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            M    I  +   +      + R  A+  D + L   +     P E VI+    S     
Sbjct: 182 KMNLRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNPDEWVIVGTPQSHEAYG 241

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEE 253
             + + D E+  +V  T   + T+ E
Sbjct: 242 CMLRKNDPEFKKLVDDTIAQVQTSGE 267


>gi|107100793|ref|ZP_01364711.1| hypothetical protein PaerPA_01001821 [Pseudomonas aeruginosa PACS2]
 gi|116049294|ref|YP_791903.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|296390281|ref|ZP_06879756.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAb1]
 gi|115584515|gb|ABJ10530.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 302

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
               + +   +L     +      L  IK  G +  G     + F+ +    G   G+  
Sbjct: 6   SLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGTEPGKPIGYSH 65

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     K++Y  + ++ R   +Q+  +DI   +T     R+    + 
Sbjct: 66  DLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K   I     L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + LY       +P + V+     S       + +GD  +
Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
             +V         + E+ 
Sbjct: 244 KKVVDKAITDTYASGEVN 261


>gi|167461572|ref|ZP_02326661.1| glutamine ABC transporter (glutamine-binding protein)
           [Paenibacillus larvae subsp. larvae BRL-230010]
 gi|322381527|ref|ZP_08055506.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154534|gb|EFX46831.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 284

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 11/237 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +        IK+RG L  G+      F      +G+  G+DVDF +AL+     D +K++
Sbjct: 44  TAAGGTFQKIKERGKLIVGVKYDTNLFGLKDPASGEVTGYDVDFAKALAKKFLGDENKLE 103

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              +N+K R   L + +ID +      +  R+    + F  + +  GQ  ++ K   I  
Sbjct: 104 LEEVNSKTRIPMLDNGEIDAIIATMTISEERKK--QVDFSDVYFKAGQSLLVKKGSPIKG 161

Query: 140 VSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +  +  G  +    G T+   + +  +        + +E  +E   A +A + DA T D 
Sbjct: 162 IGDIRKGTKVLTAKGATSGKNIKEKAE----GVQVLEYENYQEAFNALKAGKGDALTTDN 217

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S LY +   +       ++ +  +  P   A+ +G+ E+   V+     M +  E  
Sbjct: 218 SILYGMVKQDPN---FEVVGEPFTDEPYGIAVKKGEAEFLKEVNGLLKEMQSNGEAD 271


>gi|326789993|ref|YP_004307814.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
           5427]
 gi|326540757|gb|ADZ82616.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium
           lentocellum DSM 5427]
          Length = 288

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 21/261 (8%)

Query: 1   MYKDFFVSILCLIIL----FFTSFSTN---------ASILGDIKKRGFLKCGINTGLVGF 47
           M +   V  + + +L      T+ S N         AS +  IK+RG ++ G+ +    F
Sbjct: 1   MKQRLRVLSILVGLLVILGSLTACSNNKQASSNGESASGIEAIKERGKIRIGVFSDKPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             V  NG  +G+DV F + ++  +  D + ++++ + A  R   LQS ++DI+  N   T
Sbjct: 61  GYVDENGVNQGYDVYFAKRIAKDLLGDENAVEFVLVEAASRVEYLQSGKVDIILANFTVT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
              + +  + F         G +      I+ VSQL G  + V  GTT E      F  +
Sbjct: 121 K--DRAEVVDFALPYMKVALGVVSPDGAIITDVSQLEGKQLIVNKGTTAETY----FTEN 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + ++   E   A +  R  A   D + ++A  +    P     +  +     +A
Sbjct: 175 YPNIELLKYDENTEAFNALKDGRGAALAHDNTLVFAWAIQ--NPGFTTGIESLGGLDTIA 232

Query: 228 PAIIQGDTEWYNIVSWTHYAM 248
           PA+ +G+TE  N ++    A+
Sbjct: 233 PAVQKGNTELLNWINDEIKAL 253


>gi|161520627|ref|YP_001584054.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189353187|ref|YP_001948814.1| ABC-type polar amino acid transport system substrate-binding
           protein [Burkholderia multivorans ATCC 17616]
 gi|160344677|gb|ABX17762.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189337209|dbj|BAG46278.1| ABC-type polar amino acid transport system substrate-binding
           protein [Burkholderia multivorans ATCC 17616]
          Length = 298

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F  + + L      +         L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRFRWAAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +   +  D       ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDQLKTDLNLPGLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+     L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +V      M T+ E  
Sbjct: 239 PAFKRVVDGVIAKMQTSGEAE 259


>gi|158321705|ref|YP_001514212.1| extracellular solute-binding protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158141904|gb|ABW20216.1| extracellular solute-binding protein family 3 [Alkaliphilus
           oremlandii OhILAs]
          Length = 285

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 20/257 (7%)

Query: 1   MY--KDFFVSILC--LIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFA 48
           M   K    ++L   ++I    + S  A          L  IK+RG ++ G+ +    F 
Sbjct: 1   MKIIKKVLATLLVGIVVIGGLVACSPKAGSEAGGTVDSLDAIKERGTIRIGVFSDKAPFG 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V ANG+ +GFDV   +  +  +  D SK++++ + A  R   L+S ++DI+  N   T 
Sbjct: 61  YVDANGENQGFDVHIAKRFAKDLLGDESKVEFVLVEAANRVAFLESNKVDIIMANFTVTE 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F         G +      I+S+  L    + V  GTT      DYF  ++
Sbjct: 121 ERKE--KVDFANPYMKVSLGIVSPDGALITSIEDLKDQKLIVNKGTTA----QDYFTKNH 174

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
            +   + +++  E   A +  R  A   D + + A       P   V +P + ++  +AP
Sbjct: 175 PEIELLKYDQNTEAFEALKDLRGAALAHDNTEVLAWA--KGNPGFTVGIPVLGNQDVIAP 232

Query: 229 AIIQGDTEWYNIVSWTH 245
           A+ +G+TE    ++   
Sbjct: 233 AVKKGNTELLAWINEEL 249


>gi|290510406|ref|ZP_06549776.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55]
 gi|289777122|gb|EFD85120.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55]
          Length = 318

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 90/263 (34%), Gaps = 15/263 (5%)

Query: 4   DFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
                   ++++  T+          +   S L  I K G +  G     V F+      
Sbjct: 17  QLRKLAAAMLVMGVTAGLAHAEDAAPAAGQSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ 76

Query: 55  DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+  D+  A+  AI         +++ +P+ ++ R   LQ+   D    +T   L R
Sbjct: 77  KVVGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLER 136

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F    +  G   ++ K   I     L   ++ V +GTT+E+ L        M 
Sbjct: 137 QKQAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMN 194

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   +      + R  A+  D + L   +    +P    I+    SK      +
Sbjct: 195 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCML 254

Query: 231 IQGDTEWYNIVSWTHYAMVTAEE 253
            + D  +  +V  T     T+ E
Sbjct: 255 RKDDPSFKALVDETVAQAQTSGE 277


>gi|74311191|ref|YP_309610.1| glutamate and aspartate transporter subunit [Shigella sonnei Ss046]
 gi|73854668|gb|AAZ87375.1| putative periplasmic binding transport protein [Shigella sonnei
           Ss046]
 gi|323163917|gb|EFZ49726.1| glutamate/aspartate periplasmic-binding protein [Shigella sonnei
           53G]
          Length = 302

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHSDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTTAQVQTSGEAE 263


>gi|299066929|emb|CBJ38124.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           high affinity periplasmic solute-binding protein
           [Ralstonia solanacearum CMR15]
          Length = 304

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 99/251 (39%), Gaps = 10/251 (3%)

Query: 7   VSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVD 62
            ++LC  +  F   T+ ++   +L  I+  G ++         F+   A+     G+ VD
Sbjct: 11  AALLCTSLSIFSPGTALASATPVLDRIRDTGTVRIAYRESASPFSYYDADSKKPIGYTVD 70

Query: 63  FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  +   +  +      K+QY+ +    R  A+Q  + D+    T     RE    +AF
Sbjct: 71  LCLRVVDKLRTELKRPDLKVQYVLITPSTRIPAIQEGKADLECSTTTNN--RERREQVAF 128

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y  G   ++    GI     L   ++    GTT+   L     +  ++      + 
Sbjct: 129 TIPHYIAGIRMLVKTASGIHKWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKE 188

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E  A   + + DA+  D   LY+ +     P ++ ++ D+++  P A  + + D ++ 
Sbjct: 189 HAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFK 248

Query: 239 NIVSWTHYAMV 249
           + V     A++
Sbjct: 249 HTVDRAMTAII 259


>gi|238893716|ref|YP_002918450.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238546032|dbj|BAH62383.1| glutamate/aspartate periplasmic binding protein [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 328

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 12/263 (4%)

Query: 3   KDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           +    ++L + +    + +         + L  I K G +  G     V F+        
Sbjct: 29  RKLATAMLVMGMTAGLAQAEDAAPAAGQNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKV 88

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+  D+  A+  AI         +++ +P+ ++ R   LQ+   D    +T   L R+ 
Sbjct: 89  VGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQK 148

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F    +  G   ++ K   I     L   ++ V +GTT+E+ L        M   
Sbjct: 149 QAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMNMR 206

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   +      + R  A+  D + L   +    +P    I+    SK      + +
Sbjct: 207 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRK 266

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D  +  +V  T     T+ E  
Sbjct: 267 DDPTFKALVDETVAQAQTSGEAE 289


>gi|300704696|ref|YP_003746299.1| glutamate/aspartate ABC transport protein high affinity periplasmic
           solute-binding protein [Ralstonia solanacearum CFBP2957]
 gi|299072360|emb|CBJ43698.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           high affinity periplasmic solute-binding protein
           [Ralstonia solanacearum CFBP2957]
          Length = 303

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 92/248 (37%), Gaps = 6/248 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            +     I+   T+ ++   +L  I+  G ++         F+   A+    G+ VD C 
Sbjct: 13  LLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCL 72

Query: 66  ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +   +  +      K+QY+ +    R   +   + D+    T     RE    +AF   
Sbjct: 73  RVVDKLRTELKRPDLKVQYVQVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFTIP 130

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y  G   ++    GI     L   ++    GTT+   +     +  +       +   +
Sbjct: 131 HYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHAD 190

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             A   + + DA+  D   LY+ +     P ++ ++ D+++  P A  + + D E+   V
Sbjct: 191 AFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKRTV 250

Query: 242 SWTHYAMV 249
                +++
Sbjct: 251 DRAMTSII 258


>gi|152985923|ref|YP_001349397.1| putative ABC transporter binding protein subunit [Pseudomonas
           aeruginosa PA7]
 gi|150961081|gb|ABR83106.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PA7]
          Length = 302

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
               + +   +L     +      L  IK  G +  G     + F+ +    G   G+  
Sbjct: 6   SLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGVEPGKPIGYSH 65

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     K++Y  + ++ R   +Q+  +DI   +T     R+    + 
Sbjct: 66  DLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K   I     L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + LY       +P + V+     S       + +GD  +
Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
             +V         + E+ 
Sbjct: 244 KKVVDKAITDTYASGEVN 261


>gi|221209879|ref|ZP_03582860.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD1]
 gi|221170567|gb|EEE03033.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD1]
          Length = 317

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F  + + L      +         L  IK  G +  GI    V F+         G
Sbjct: 20  MDRRFRWAAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 79

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +   +  D       ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 80  YSRDIAARIIDQLKTDLNLPGLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 139

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+     L+G ++   AGT+ E  L    +   M    I
Sbjct: 140 A--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 197

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 198 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDD 257

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +V      M T+ E  
Sbjct: 258 PAFKRVVDGVIAKMQTSGEAE 278


>gi|168177792|ref|ZP_02612456.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
 gi|226947682|ref|YP_002802773.1| polar amino acid uptake ABC transporter amino acid-binding protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|182670634|gb|EDT82608.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
 gi|226841993|gb|ACO84659.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 267

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     S   + L DIK +G    G++            G+
Sbjct: 1   MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +      + + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEVI 247


>gi|255321552|ref|ZP_05362710.1| acriflavine resistance protein [Campylobacter showae RM3277]
 gi|255301408|gb|EET80667.1| acriflavine resistance protein [Campylobacter showae RM3277]
          Length = 278

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 15/270 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K  F  +     +F T  +      A  L  IK+RG+++ G+ +    F  V   G  
Sbjct: 1   MRKLLFSFLATFAAVFLTGQANLQAAEADALAKIKERGYVRVGVFSDKPPFGYVDKEGKN 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G+D+ F + ++  +  D SK+++  + A  R   L + ++DI   N   T  R     +
Sbjct: 61  QGYDIYFAKRIAKDLLGDESKVKFELVEAAGRVEVLVADKVDITLANFTKTPERARV--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F         G +      I SV +L G  + V  GTT +      F  ++     I +
Sbjct: 119 DFALPYMKVSLGVVSPDGAVIKSVDELKGKKLIVNKGTTADAY----FTKNHPDIELIKY 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  E  AA    R  A   D + L+A     + P   V +  +     +APA+ +G+  
Sbjct: 175 DQNTETFAALVDKRGVALAHDNALLFAWA--KENPGFTVGIEALGEVDVIAPAVKKGNKA 232

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               ++     +    +     KN +   K
Sbjct: 233 LLEWLN---NEITELGKENFFHKNYDATLK 259


>gi|331645812|ref|ZP_08346915.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           M605]
 gi|331044564|gb|EGI16691.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           M605]
          Length = 325

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            + L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 53  GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T     R+      F    +  G   +  K   I  
Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSNTIFVVGTRLLTKKGGDIKD 170

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286


>gi|317491137|ref|ZP_07949573.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920684|gb|EFV42007.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 304

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 91/263 (34%), Gaps = 12/263 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K     +L  +       +        +  L  IK  G +  G     V F+      
Sbjct: 3   MRKLALSMLLIGMSSTMVHAADDQKSEATSDTLQKIKNNGVIVVGHRESSVPFSYYDNAQ 62

Query: 55  DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+  D+   +  A+         +++ LP+ ++ R   LQ+   D    +T     R
Sbjct: 63  KVVGYSQDYSNQIVDAVKKQLNMPNLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNAER 122

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                 AF    +  G   ++ K   I     L+G  + V +GTT+E+ L    +  NMK
Sbjct: 123 --QQQAAFSNTIFVVGTRLLVKKGGDIKDFKDLAGKPVVVTSGTTSEILLNKLNEKDNMK 180

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   +      + R  A+  D + L   +    +P +  I+    S       +
Sbjct: 181 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEIVGTPQSHEAYGCML 240

Query: 231 IQGDTEWYNIVSWTHYAMVTAEE 253
            + D  +  ++  T     T+ E
Sbjct: 241 RKNDPAFKKLMDETIAKAQTSGE 263


>gi|159794821|pdb|2IA4|A Chain A, Crystal Structure Of Novel Amino Acid Binding Protein From
           Shigella Flexneri
          Length = 279

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 85/240 (35%), Gaps = 6/240 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75
                S L  I K G +  G     V F+         G+  D+  A+  A+        
Sbjct: 1   APAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPD 60

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            +++ +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K  
Sbjct: 61  LQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGG 118

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I   + L G ++ V +GTT+E+ L    +        I  +   +      + R  A+ 
Sbjct: 119 DIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKXNXRIISAKDHGDSFRTLESGRAVAFX 178

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D + L   +    +P    I+    S+      + + D ++  +   T   + T+ E  
Sbjct: 179 XDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCXLRKDDPQFKKLXDDTIAQVQTSGEAE 238


>gi|34495575|ref|NP_899790.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Chromobacterium violaceum ATCC 12472]
 gi|34101430|gb|AAQ57799.1| probable amino acid ABC transporter, periplasmic amino acid-binding
           protein [Chromobacterium violaceum ATCC 12472]
          Length = 302

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 82/241 (34%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
             +     L  IK  G +  G     + F+    N    G+ VD    +   +  +    
Sbjct: 25  GAAELTGTLKKIKDSGVIVLGNRDSSIPFSYYDNNQKPIGYSVDLANKVVDEVKKELKMP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++Y  + ++ R   +Q+  +D+   +T     R   +   F    +  G   +  K 
Sbjct: 85  NLQVRYNLVTSQTRIPLVQNGTVDLECGSTTNNAERGKQVA--FSVGIFEIGTRLLTAKT 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            G+     L G ++   AGTT+E  +     + NM  + I  +   E      + R  A+
Sbjct: 143 SGVKDFPDLKGKNVVTTAGTTSERLIKAMNASKNMGMNVISAKDHGESFLMLESGRAAAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + LY        P   V+     S       + + D  +  +V         + E+
Sbjct: 203 MMDDALLYGEMAKAKNPGNWVVTGKSQSYEIYGCMMRKDDPAFKKVVDTALEKTFKSGEV 262

Query: 255 G 255
            
Sbjct: 263 N 263


>gi|71735103|ref|YP_276039.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71555656|gb|AAZ34867.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 358

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
                 +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 60  HLLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 119

Query: 62  DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 120 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 177

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 178 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 237

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + L        +P +  +     S       + +GD  +
Sbjct: 238 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 297

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + ++ 
Sbjct: 298 KKAVDDAIVATYKSGDIN 315


>gi|187777536|ref|ZP_02994009.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC
           15579]
 gi|187774464|gb|EDU38266.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC
           15579]
          Length = 267

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     +   + L DIK +G    G++            G+
Sbjct: 1   MKKKNILFSILIMGLIFMLTGCGNKSKEDTSLKDIKDKGEFVVGLDDSFPPMGFKNDKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +      + + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVYNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEVI 247


>gi|152969252|ref|YP_001334361.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150954101|gb|ABR76131.1| glutamate/aspartate periplasmic binding protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 318

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 12/263 (4%)

Query: 3   KDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           +    ++L + +    + +         + L  I K G +  G     V F+        
Sbjct: 19  RKLATAMLVMGMTAGLAQAEDAAPAAGQNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKV 78

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+  D+  A+  AI         +++ +P+ ++ R   LQ+   D    +T   L R+ 
Sbjct: 79  VGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQK 138

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F    +  G   ++ K   I     L   ++ V +GTT+E+ L        M   
Sbjct: 139 QAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMNMR 196

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   +      + R  A+  D + L   +    +P    I+    SK      + +
Sbjct: 197 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRK 256

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D  +  +V  T     T+ E  
Sbjct: 257 DDPTFKALVDETVAQAQTSGEAE 279


>gi|257094459|ref|YP_003168100.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046983|gb|ACV36171.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 284

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 6/242 (2%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +     L F   +  A  L  IK    +  G     + F+    +    G+ VD C  +
Sbjct: 7   LLCVATALSFPLSALAAGTLDKIKASRTISLGYREASIPFSYTGDDNQPWGYSVDLCTRV 66

Query: 68  SSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           ++A    +  +  ++Q++P+  + R   L+S  ID+   +T  +L R     + F  +T+
Sbjct: 67  AAAIVKQLGLEELQLQWVPVTPETRVAKLKSGAIDLECGSTTSSLAR--MQEVDFSLLTF 124

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            DG  ++  K  GI  +  L+G  I V AGTT+E T+A+    H +    +     ++  
Sbjct: 125 VDGGSYLTRKASGIKRLDDLAGKRIAVAAGTTSERTIAEALTQHQVGAQLVKVSDHQQGL 184

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AA    + DAY  D S L  L L +   S+ V+ P+  S  P A  + + D ++   V+ 
Sbjct: 185 AAMVQGKVDAYASDRSLLIGLALDSGNQSDWVLGPETFSYEPYALMMRRNDADFRLAVNR 244

Query: 244 TH 245
             
Sbjct: 245 EL 246


>gi|270293187|ref|ZP_06199398.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M143]
 gi|270279166|gb|EFA25012.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M143]
          Length = 264

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + +++ +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMIANEL---KVKVRYVPVTAQTRGPLLDNEQVDLDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 116 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLEDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDTLVTKW 241


>gi|37525274|ref|NP_928618.1| glutamate and aspartate transporter subunit [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784701|emb|CAE13601.1| Glutamate/aspartate transport system permease protein GltI
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 297

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 92/250 (36%), Gaps = 7/250 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M     V  + L+ +   + +      L  +K  G +  G     V FA    +    G+
Sbjct: 1   MRMRNLVLTMMLLGMAGAAQAEELTGTLKKVKDDGVIIVGHRESSVPFAYYDNHQKVVGY 60

Query: 60  DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D+   +  A+         +++ +P+ ++ R   LQ+   D    +T   L R+    
Sbjct: 61  SQDYSNLIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +      +  K  GI     L+G ++ V AGTT+E+ L       +MK   I 
Sbjct: 119 VTFSNSIFIITTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKSMKMRIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P +  I+    S+        + D 
Sbjct: 179 AKDHGDSFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGTPQSREAYGCISRKDDL 238

Query: 236 EWYNIVSWTH 245
           ++  ++  T 
Sbjct: 239 QFKKLIDETI 248


>gi|309379285|emb|CBX22058.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 284

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M      K    S    + L            S S+ A  +  IK++G ++ G+      
Sbjct: 1   MKLNAKLKALLASAAIAVGLTACGGGSGDTQASQSSGAVTVAAIKEKGVIRIGVFGDKPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V ANG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   
Sbjct: 61  FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTK 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R     + F         G +  K K I+ ++QL   ++ V  GTT +     +F  
Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----FFTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + F++  E   A +  R  A   D + L+A     + P+  V + ++     +
Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           APA+ +G+ +  N V+    AM
Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254


>gi|121608200|ref|YP_996007.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121552840|gb|ABM56989.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 373

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 8/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    + +  + L   S        L  IK  G +  G+     G +    NG + GF
Sbjct: 73  MKKHLLAATVTSLCLSAGSVGAQTGDTLAKIKASGSVTLGVRESS-GLSYTLGNGKYVGF 131

Query: 60  DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             +    + +     +       +Y P+ ++ R   + +  +D+   +T  T  R+  + 
Sbjct: 132 HTEMAERILADIQKQLGLATLTTKYQPVTSQNRIPLVTNGTVDLECGSTTNTTARQKDVA 191

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F   TY +          GI+S+  L+G ++    GTT+  TL  + +A  + +  + 
Sbjct: 192 --FAMTTYVEEIRTATKANSGITSIRDLNGKTVATTTGTTSVQTLRRHQRADGVDFKEVF 249

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +        R DAY  D+S L A    +  PS++ I+ +++S  P+A  + + D 
Sbjct: 250 GKDHADSFLLLETGRADAYVMDVSILAANISKSKAPSDYKIVGEVLSVEPIACMLRKDDP 309

Query: 236 EWYNIVSWTHY 246
            +   V  +  
Sbjct: 310 AFKKAVDDSIK 320


>gi|300907833|ref|ZP_07125449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 84-1]
 gi|301302137|ref|ZP_07208270.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 124-1]
 gi|309795477|ref|ZP_07689894.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 145-7]
 gi|300400465|gb|EFJ84003.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 84-1]
 gi|300842689|gb|EFK70449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 124-1]
 gi|308120852|gb|EFO58114.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 145-7]
 gi|315255039|gb|EFU35007.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 85-1]
          Length = 327

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|82543098|ref|YP_407045.1| glutamate and aspartate transporter subunit [Shigella boydii Sb227]
 gi|157157607|ref|YP_001461825.1| glutamate and aspartate transporter subunit [Escherichia coli
           E24377A]
 gi|191168682|ref|ZP_03030462.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           B7A]
 gi|81244509|gb|ABB65217.1| putative periplasmic binding transport protein [Shigella boydii
           Sb227]
 gi|157079637|gb|ABV19345.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           E24377A]
 gi|190901274|gb|EDV61043.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           B7A]
 gi|320174704|gb|EFW49836.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella dysenteriae CDC 74-1112]
 gi|320185366|gb|EFW60136.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella flexneri CDC 796-83]
 gi|332097776|gb|EGJ02750.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii
           3594-74]
          Length = 302

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|168181319|ref|ZP_02615983.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Bf]
 gi|182675354|gb|EDT87315.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Bf]
          Length = 267

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     S   + L DIK +G    G++            G 
Sbjct: 1   MKKKNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +      + + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEVI 247


>gi|300937877|ref|ZP_07152670.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 21-1]
 gi|300457120|gb|EFK20613.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 21-1]
 gi|325498166|gb|EGC96025.1| glutamate and aspartate transporter subunit [Escherichia fergusonii
           ECD227]
          Length = 325

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 53  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 171 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286


>gi|300901167|ref|ZP_07119271.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 198-1]
 gi|301025212|ref|ZP_07188783.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 69-1]
 gi|300355381|gb|EFJ71251.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 198-1]
 gi|300396164|gb|EFJ79702.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 69-1]
          Length = 327

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|293418767|ref|ZP_06661202.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit
           [Escherichia coli B088]
 gi|291325295|gb|EFE64710.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit
           [Escherichia coli B088]
          Length = 301

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|170680102|ref|YP_001742772.1| glutamate and aspartate transporter subunit [Escherichia coli
           SMS-3-5]
 gi|218549769|ref|YP_002383560.1| glutamate and aspartate transporter subunit [Escherichia fergusonii
           ATCC 35469]
 gi|218553197|ref|YP_002386110.1| glutamate and aspartate transporter subunit [Escherichia coli IAI1]
 gi|218703989|ref|YP_002411508.1| glutamate and aspartate transporter subunit [Escherichia coli
           UMN026]
 gi|293403917|ref|ZP_06647911.1| glutamate and aspartate transporter subunit [Escherichia coli
           FVEC1412]
 gi|298379692|ref|ZP_06989297.1| glutamate and aspartate transporter subunit [Escherichia coli
           FVEC1302]
 gi|331662021|ref|ZP_08362944.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA143]
 gi|170517820|gb|ACB15998.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia coli
           SMS-3-5]
 gi|218357310|emb|CAQ89945.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia fergusonii
           ATCC 35469]
 gi|218359965|emb|CAQ97509.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli IAI1]
 gi|218431086|emb|CAR11962.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli UMN026]
 gi|291428503|gb|EFF01528.1| glutamate and aspartate transporter subunit [Escherichia coli
           FVEC1412]
 gi|298279390|gb|EFI20898.1| glutamate and aspartate transporter subunit [Escherichia coli
           FVEC1302]
 gi|323170779|gb|EFZ56429.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           LT-68]
 gi|323945130|gb|EGB41192.1| bacterial extracellular solute-binding protein 3 [Escherichia coli
           H120]
 gi|323967602|gb|EGB63018.1| extracellular solute-binding protein 3 [Escherichia coli M863]
 gi|324114776|gb|EGC08744.1| extracellular solute-binding protein 3 [Escherichia fergusonii
           B253]
 gi|327254340|gb|EGE65962.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           STEC_7v]
 gi|331060443|gb|EGI32407.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           TA143]
          Length = 302

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|148378449|ref|YP_001252990.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|153933297|ref|YP_001382838.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|153937497|ref|YP_001386405.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. Hall]
 gi|148287933|emb|CAL81999.1| binding-protein-dependent transport system,permease component
           [Clostridium botulinum A str. ATCC 3502]
 gi|152929341|gb|ABS34841.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152933411|gb|ABS38910.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A str. Hall]
 gi|322804728|emb|CBZ02280.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum H04402 065]
          Length = 267

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     S   + L DIK +G    G++            G+
Sbjct: 1   MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +     K+ + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAKKMG---IKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEVI 247


>gi|330430558|gb|AEC21892.1| family 3 extracellular solute-binding protein [Pusillimonas sp.
           T7-7]
          Length = 308

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 91/261 (34%), Gaps = 18/261 (6%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFA 48
           M K+F         ++L   IL F S S  +       L  IK  G +  G     + F+
Sbjct: 1   MLKNFSKKGATLRSALLAAGILAFASTSLASTPELTGTLKKIKDEGVVVLGYREASIPFS 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                    G+ +D+   +   I  D      KI+ LP+ ++ R   LQ+   D     T
Sbjct: 61  YYDDAKQPIGYSIDYTNLILERIKQDLDLPQLKIRKLPITSQNRISLLQNGTFDFECTTT 120

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                RE    + F    +  G   ++ K  GI+    L   ++ V AGTT+E+ L    
Sbjct: 121 THNASREK--QVDFSNSLFVIGTRLLVKKDSGINDFDDLKDTNVVVGAGTTSEILLRKLN 178

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
               +    I  +   E        R  A   D + L   +     P ++VI     S  
Sbjct: 179 VDKKLGMRIISAKDHSESFLTLSTGRAKAMMMDDALLAGERAKTKDPKDYVITGTPQSFE 238

Query: 225 PLAPAIIQGDTEWYNIVSWTH 245
                I + DT+   ++    
Sbjct: 239 VYGCMIRKDDTQMKALIDDVI 259


>gi|281177803|dbj|BAI54133.1| glutamate/aspartate ABC transporter substrate binding component
           [Escherichia coli SE15]
 gi|330910411|gb|EGH38921.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli AA86]
          Length = 302

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            + L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T     R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSNTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|330505353|ref|YP_004382222.1| putative ABC transporter binding protein subunit [Pseudomonas
           mendocina NK-01]
 gi|328919639|gb|AEB60470.1| putative ABC transporter binding protein subunit [Pseudomonas
           mendocina NK-01]
          Length = 302

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 89/258 (34%), Gaps = 7/258 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
           +   V+I    +            L  IK  G +  G     + F+     +    G+  
Sbjct: 6   RVLSVAIAAAFLSTPVIAEELTGTLKKIKDSGTITLGHRDSSIPFSYFGDNSRQPIGYSH 65

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 66  DLQLKVVEAIKQELSMPDLKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNIER--QQQVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K  GI+    L G ++   AGTT+E  +        M  + I  +
Sbjct: 124 FSVGIFEVGTRLLAKKSSGINDFDDLKGKNVVTTAGTTSERLIKAMNAEKKMGMNVISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      ++R  A+  D + L        +P +  ++    S       + +GD  +
Sbjct: 184 DHGESFLMLESNRAVAFMMDDALLAGEMAKAKKPDDWAVVGTPQSFEIYGCMVRKGDAGF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
             +V     A   + E+ 
Sbjct: 244 KQVVDKAISATFASGEIN 261


>gi|330005974|ref|ZP_08305449.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS
           92-3]
 gi|328536028|gb|EGF62435.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS
           92-3]
          Length = 318

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 92/263 (34%), Gaps = 12/263 (4%)

Query: 3   KDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           +    ++L + +    + +         + L  I K G +  G     V F+        
Sbjct: 19  RKLATAMLVMGMTAGLAQAEDAAPAAGQNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKV 78

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+  D+  A+  AI         +++ +P+ ++ R   LQ+   D    +T   L R+ 
Sbjct: 79  VGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQK 138

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F    +  G   ++ K   I   S L   ++ V +GTT+E+ L        M   
Sbjct: 139 QAA--FSDTIFVVGTRLLVKKGGPIKDFSDLKDKAVVVTSGTTSEILLHKLNDEKKMNMR 196

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   +      + R  A+  D + L   +    +P    I+    SK      + +
Sbjct: 197 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRK 256

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D  +  +V  T     T+ E  
Sbjct: 257 DDPTFKALVDETVAQAQTSGEAE 279


>gi|237793772|ref|YP_002861324.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Ba4 str.
           657]
 gi|229262805|gb|ACQ53838.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Ba4 str.
           657]
          Length = 267

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     S   + L DIK +G    G++            G+
Sbjct: 1   MKKKNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +      + + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEVI 247


>gi|269139977|ref|YP_003296678.1| glutamate and aspartate transporter subunit [Edwardsiella tarda
           EIB202]
 gi|267985638|gb|ACY85467.1| glutamate and aspartate transporter subunit [Edwardsiella tarda
           EIB202]
 gi|304559810|gb|ADM42474.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Edwardsiella tarda FL6-60]
          Length = 300

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 6/245 (2%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           + +     +  +  L  IK  G +  G     V F+         G+  D+  A+  A+ 
Sbjct: 17  LFVAAQDATDGSPTLQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVK 76

Query: 73  DD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                   +++ LP+ ++ R   LQ+   D+   +T     R     +AF    +  G  
Sbjct: 77  KQLNLPALQVKLLPITSQNRIPLLQNGTYDVECGSTTHNAER--QQQVAFSNTLFIVGTR 134

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  K+ G+     L+G  + V +GTT+E+ L    +  +MK   I  +   +      +
Sbjct: 135 LLTAKESGVHDFRDLAGKPVVVTSGTTSEIMLNRMNEKDDMKMRIISAKDHGDAFRTLES 194

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            R  A+  D + L   +    +P   VI+    S       + + D  +  +V  T   +
Sbjct: 195 GRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRRDDPAFKKLVDDTIAHV 254

Query: 249 VTAEE 253
            T+ +
Sbjct: 255 QTSGQ 259


>gi|309389821|gb|ADO77701.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 264

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M  + F S L L+++ F   ST   A  L +IK++G +  G++           +G+  G
Sbjct: 1   MKNNLFKSFLVLVLVLFLCSSTVMAADSLVEIKEKGKMVVGLDDSFPPMGFRNDDGEIVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  +  +  +  +     +  ++     L+L++  ID++      T  RE    + F
Sbjct: 61  FDIDLAKEAAKRLGVEAE---FKAVDWDGVILSLKNGMIDVIWNGLTITPAREK--SIDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 + Q  ++ K   I + S L+   I +Q G++    +    +          F  
Sbjct: 116 SQPYLENSQSIVVQKNSEIKNKSHLAAKVIGIQLGSSAVSAVESEPEVMASFKELRKFSN 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E     R  R +A   D   +      + RP +  +L D          +  G   + 
Sbjct: 176 NTEALMDLRTGRVEAVVLDK--IVGRYYMSKRPGQFRVLKDNFGAEKYGVGVRAGADSFR 233

Query: 239 NIVSWTHYAMVT 250
             ++     M+ 
Sbjct: 234 KALNKVLTEMIE 245


>gi|319405905|emb|CBI79537.1| amino-acid ABC transporter binding protein [Bartonella sp. AR 15-3]
          Length = 301

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 20/297 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + I  + +   +        L  IK+ G +  G+     G A    NG + GF 
Sbjct: 1   MRKLFLIFIAAIFMGLTSIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    + + I      P K+ YLP+ ++ R   L++   D    +T     R   +   
Sbjct: 60  TEMAEHIINDISKKIGQPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSARNKEVA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +     + K  GI S+  L+G  +    GTT    +    +  N+ +  +  +
Sbjct: 118 FAYTTYVETVKIAVKKNSGIKSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFQVVNGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R DA+  DIS L A    +  PS++VIL   +S  P+A  +   D  +
Sbjct: 178 DHGESFLLLESGRADAFVMDISILSANIAKSKNPSDYVILDTTLSVEPIACMLRLNDKNF 237

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
              ++ +           + Q N   ++K         F+     +N    L L+K+
Sbjct: 238 EQAINDSI----------VRQINDASLAKLYNKW----FMEPIPPTNTIINLPLSKE 280


>gi|182683540|ref|YP_001835287.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CGSP14]
 gi|182628874|gb|ACB89822.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CGSP14]
          Length = 293

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 30  MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 89

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 90  GIETDLAKIVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 144

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 145 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 204

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 205 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 259

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 260 NDYLDTLVTKW 270


>gi|319404432|emb|CBI78035.1| amino-acid ABC transporter binding protein [Bartonella rochalimae
           ATCC BAA-1498]
          Length = 301

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 6/248 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + I  + +            L  IK+ G +  G+     G A    NG + GF 
Sbjct: 1   MRKSFVIFIAAIFMGLTNIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    + + I      P K+ Y P+ ++ R   L++   D    +T     R       
Sbjct: 60  TEMAERIINDISKKIGQPIKVNYQPITSQNRIPLLKNGTYDFECGSTTNDSARNKEAA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +    ++ K  GI S+  L+G  +    GTT    +    +  N+ +  +  +
Sbjct: 118 FAYTTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +   +  + R DA+  D S L A    +  PS+++IL   +S  P+A  +   D  +
Sbjct: 178 DHGDSFLSLESGRADAFVMDTSILSAHIAKSKNPSDYIILDTTLSVEPIACMLRLNDKNF 237

Query: 238 YNIVSWTH 245
              ++ + 
Sbjct: 238 EQTINDSI 245


>gi|157693147|ref|YP_001487609.1| glutamine ABC transporter binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681905|gb|ABV63049.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Bacillus pumilus SAFR-032]
          Length = 269

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +   +  +   I   T+          +   S L  I+K   +  G+      F    
Sbjct: 4   MKRFGLLLFMTCCIAALTACGFAEKGSTDAKQGSSLETIQKDKKMIFGVKNDTRLFGLKN 63

Query: 52  AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            + GD +GFD+D  +A++  I  D  K ++  + +K R   LQ   I  +      T  R
Sbjct: 64  PSSGDIEGFDIDIAKAIAKEILGDEGKAEFKEVTSKTRIPLLQKGDIHAIVATMTITEER 123

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNM 169
           +    + F  + +  GQ  ++ K   I S+  L  G  +    G+T+   + +       
Sbjct: 124 KK--EVNFSDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPEA-- 179

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + FE  +E   A ++++    T D + L+ +    D  S + ++    +  P   A
Sbjct: 180 --SVLEFENYQEAFTALKSNQGQVLTTDNAILFGM---ADEDSNYEVVGGTFTDEPYGIA 234

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +GD E    ++     +    E  
Sbjct: 235 VKKGDKELTTAINKALKTLKDNGEYD 260


>gi|310766983|gb|ADP11933.1| glutamate/aspartate ABC transporter, substrate-binding protein
           [Erwinia sp. Ejp617]
          Length = 309

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 94/270 (34%), Gaps = 20/270 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVGF 47
           M        L L  +         +              L  I K G +  G     V F
Sbjct: 1   MKFRKLGLCLALAGIASGIAHAEDAKAPAAADAQQQTHTLEKIAKSGVIVVGHRESSVPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103
           +         G+  D+  A+ +AI         +++ LP+ ++ R   LQ+   D    +
Sbjct: 61  SYYDNQQKAVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T   + R+     +F    +  G   ++ K   I   + L G ++ V +GTT+E+ L   
Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKL 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                M    +  +   +      + R  A+  D + L   +    +PSE  IL    S 
Sbjct: 179 NDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSH 238

Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252
                 + +GD E+  ++  T   A  + E
Sbjct: 239 EAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268


>gi|239814553|ref|YP_002943463.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239801130|gb|ACS18197.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 295

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 91/238 (38%), Gaps = 6/238 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----K 77
             A  L  I + G +        V F+ +       GF V+   A+  A+    +    +
Sbjct: 21  QAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFSVELSNAVVEAVKKKLNKPSLQ 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +Q +P+ ++ R   + +  +D+   +T     R   +   F    ++ G   ++ K   I
Sbjct: 81  VQLMPVTSQNRIPLITNGTVDLECGSTTNNSARGKDVA--FAVNHFYTGTRLLVKKSSKI 138

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              + L+  ++    GTT  L +  Y    N+    ++ +   +      + R  A+  D
Sbjct: 139 KDYADLAKKTVASTTGTTNALVMRKYNTEKNLDMDIVLGKDHADAFLLVESDRAVAFAMD 198

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              L+ L      P+++ ++ + +   P A  + + D  +  +V  T   M+ + E  
Sbjct: 199 DILLFGLIANAKNPADYEVVGEPLQVEPYACMLPKDDPAFKKLVDDTFIGMMKSGEFE 256


>gi|257866174|ref|ZP_05645827.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC30]
 gi|257872505|ref|ZP_05652158.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC10]
 gi|257875809|ref|ZP_05655462.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC20]
 gi|257800108|gb|EEV29160.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC30]
 gi|257806669|gb|EEV35491.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC10]
 gi|257809975|gb|EEV38795.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC20]
          Length = 269

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 99/252 (39%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54
           M K  F  ++    L   S      +    IL + K+   +  G+      F  +  A  
Sbjct: 1   MRKKIFSFLVLAFALVTFSGCKGQSAAEIDILENSKETNQIVWGVKNDTRLFGLMDIATR 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +GFD+D  RA++  I        ++ + +K R   L++  ID +      T  R+   
Sbjct: 61  EVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAIIATMTITEERKK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F  + +  GQ  ++ K   I  +  L+   ++ V  G+T+ + + +           
Sbjct: 119 QVDFSDVYFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAVNIREAAPEA----QI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  E   E   A ++ + DA T D + L  +   N     + ++ +  ++ P   AI +G
Sbjct: 175 LELENYAEAFTALQSGQGDAMTTDNAILLGMASENPN---YHLVGETFTEEPYGIAINKG 231

Query: 234 DTEWYNIVSWTH 245
              + + V+   
Sbjct: 232 QKPFLDAVNQAL 243


>gi|307706136|ref|ZP_07642955.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307618536|gb|EFN97684.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 264

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S + + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSAILISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   + +  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L             V+L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|148269469|ref|YP_001243929.1| extracellular solute-binding protein [Thermotoga petrophila RKU-1]
 gi|147735013|gb|ABQ46353.1| extracellular solute-binding protein, family 3 [Thermotoga
           petrophila RKU-1]
          Length = 246

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L + I+ F+        + +IK RG+L  G++     F  V  NG+  GFD
Sbjct: 1   MKKLLVVLVLLVSIVIFS------GTIDEIKSRGYLLVGLSADFPPFEFVDENGNIAGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  +   ++ + +       +L +K+ID++      T  R+  +   F  
Sbjct: 55  VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  GQ  ++ K       +   L G ++ VQ GTT ++ ++ Y          + F++
Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D       +    +  + VI   ++S      A+ + DT+  
Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221

Query: 239 NIVSWTH 245
             ++   
Sbjct: 222 EFINSVL 228


>gi|309700894|emb|CBJ00191.1| glutamate/aspartate ABC transporter, substrate-binding protein
           [Escherichia coli ETEC H10407]
          Length = 302

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    +IL L +    + + +      S L  I K G +  G     V F+         
Sbjct: 4   RKPATAILTLALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T   + R+  
Sbjct: 64  GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I   + L   ++ V +GTT+E+ L    +   M    
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRI 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + L   +    +P    I+    S+      + + 
Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKD 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D ++  ++  T   + T+ E  
Sbjct: 242 DPQFKKLMDDTIAQVQTSGEAE 263


>gi|170759814|ref|YP_001785787.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169406803|gb|ACA55214.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 267

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     S   + L DIK +G    G++            G+
Sbjct: 1   MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +      + + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAEKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKNFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEII 247


>gi|311103230|ref|YP_003976083.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter
           xylosoxidans A8]
 gi|310757919|gb|ADP13368.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 295

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 9/259 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 L  ++L  +  +   S    L  IK +G +  G     + F+ +       G+ 
Sbjct: 10  RVLRGALGAVLLAGSVAAMAQSTDPILERIKAKGTITLGYRESSIPFSYLDDARKPVGYA 69

Query: 61  VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +D C     A+   +     K+ Y+ +N + R   + +  +D+   +T  +L R+    +
Sbjct: 70  MDLCMKVVDAVRQRLQMPALKVDYIAVNPQNRIALVANGTVDLECGSTVNSLGRQA--QV 127

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +      ++ K   I  V  L+G ++ +   TT E  +    +A N++   +  
Sbjct: 128 DFSAPHFISTTRLLVRKGADIKEVEDLNGKAVALPINTTPERLIKALIEAKNLQVRIVPV 187

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E   A    R DA++ D   LY L+ +   P +  ++   +S  P    + +  T 
Sbjct: 188 RDNSEGFLALSTGRADAFSTDDILLYGLRKSAPTPVDFEVVGRPLSFDPYGLMLQKNSTV 247

Query: 237 WYNIVSWTHYAMVTAEELG 255
           + ++V+ T    V + EL 
Sbjct: 248 FLSLVNATIARSVRSGELN 266


>gi|253581218|ref|ZP_04858475.1| extracellular solute-binding protein family 3 [Ruminococcus sp.
           5_1_39B_FAA]
 gi|251847495|gb|EES75468.1| extracellular solute-binding protein family 3 [Ruminococcus sp.
           5_1_39BFAA]
          Length = 330

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 22/257 (8%)

Query: 1   MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K     +L   +   T                +  A  L +IKK G +K G+ +    
Sbjct: 1   MKKKILAVLLATGVAATTLLGGSILVSAADDGGNTAQARTLDEIKKDGKIKIGVFSDKNP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V  NGD +G+D+ F + L+  +       ++  + A  R   LQS ++D++  N   
Sbjct: 61  FGYVDENGDVQGYDIYFGKRLAKDLLGSEDDAEFTYVEAASRVEYLQSAKVDVILANFTV 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   + +  + F         G +      I  V  L G  + V  GTT E    D    
Sbjct: 121 TD--DRAEKVDFALPYMKVALGVVSPDDALIKDVKDLEGKKLIVVKGTTAETYFTD---- 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +      + F+  +E   A    R DA++ D + + A           V +  +     +
Sbjct: 175 NYPDIELVKFDEYQEAYDALLDGRGDAFSTDNTEVLAWAQQ--NEGFSVGIESLGDIDTI 232

Query: 227 APAIIQGDTEWYNIVSW 243
           APA+ +G+T+  N ++ 
Sbjct: 233 APAVQKGNTDLLNAIND 249


>gi|238026228|ref|YP_002910459.1| glutamate/aspartate ABC transporter periplasmic
           glutamate/aspartate-binding protein [Burkholderia glumae
           BGR1]
 gi|237875422|gb|ACR27755.1| Glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia glumae
           BGR1]
          Length = 297

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 83/243 (34%), Gaps = 6/243 (2%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
               + +  A  L  IK  G +  G     + F+    N    G+  DF   +  A+   
Sbjct: 16  FAGGAIAQEAGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVIGYARDFQMRIVDAVKKK 75

Query: 75  PSKIQYL----PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
            +         P+ ++ R   +Q+  +DI   +T   L R+      F    +  G   +
Sbjct: 76  LNLPNLQTKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA--FSTTYFVIGTRLM 133

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             K  GI   + L G ++   AGTT+E  L        M  + I  +   E        R
Sbjct: 134 TSKDSGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMNIISAKDHGESFQTLETGR 193

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             A+  D + L   +    +P   VI+    S+      + + D  +  +V         
Sbjct: 194 AVAFMMDDALLAGERAKAKKPDNWVIVGTPQSEEAYGCMMRKDDPAFKKVVDDAITETEK 253

Query: 251 AEE 253
           + E
Sbjct: 254 SGE 256


>gi|291616688|ref|YP_003519430.1| GltI [Pantoea ananatis LMG 20103]
 gi|291151718|gb|ADD76302.1| GltI [Pantoea ananatis LMG 20103]
          Length = 298

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 6/226 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
           +  L  I   G +  G     V F+         G+   +  A++ AI         +I+
Sbjct: 26  SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   L R+      F    +  G   ++ K   I  
Sbjct: 86  MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKGSPIKD 143

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++ V +GTT+E+ L        M    I  +   +        R  A+  D +
Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L   +    +P + VI+    SK      + + D ++  +V  T 
Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDTI 249


>gi|330966686|gb|EGH66946.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 304

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 89/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
               + +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 6   HLLGAAIAATLISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSH 65

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 66  DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + L        +P +  +     S       + +GD  +
Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + ++ 
Sbjct: 244 KKAVDDAIVATYKSGDIN 261


>gi|319940827|ref|ZP_08015166.1| extracellular solute-binding protein family 3 [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805709|gb|EFW02490.1| extracellular solute-binding protein family 3 [Sutterella
           wadsworthensis 3_1_45B]
          Length = 300

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 7/259 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            +    +  CL  L     +      L  +++ G +  G     V F+ + A+G   G+ 
Sbjct: 6   RRTAVAAATCLFALSGVVSAAELTGTLKKVQETGSITLGYRESSVPFSYLNADGKPVGYA 65

Query: 61  VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
              C+ ++ A    +      ++Y  + +  R   +Q+  +DI   +T  +L R+     
Sbjct: 66  FTVCQRVADAVKSELGLKTLDVKYQAVTSANRIPLIQNGTVDIECGSTTNSLKRQREAA- 124

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +       + K  GI S+  L+G ++ V +GTT+   + ++ KAHN+K   ++ 
Sbjct: 125 -FSVSYFGIQVSAAVWKSSGIKSLEDLNGKTVTVTSGTTSVALIKEFEKAHNLKIRYLMT 183

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E        R DA+  D   L          SE  IL   +   P      + D  
Sbjct: 184 KDFAESMQLVANKRADAFILDDVLLAGQISNLPNASEFTILDASLGVEPYGAMFRKDDAP 243

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   M+ + EL 
Sbjct: 244 FKAVVDKTVKGMIASGELA 262


>gi|17545200|ref|NP_518602.1| amino-acid-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427491|emb|CAD14009.1| probable amino-acid-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 313

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 107/309 (34%), Gaps = 25/309 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      ++L  I +  ++         L  IK  G +  G+    + F+         G
Sbjct: 16  MNLAKLATVLAAIGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 75

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D       A+   +     +++ +P+ ++ R   LQ+  ID+   +T   L R+   
Sbjct: 76  YSYDVATKVVEAVKEQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 133

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +F    +  G   ++ K  GI     L G ++   AGTT+E  L        +  + I
Sbjct: 134 QASFTNTIFIIGTRMMVKKDSGIKDWVDLKGKNVVTTAGTTSERLLRKMNDEKQLGMNII 193

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + LY  +     P++ V++    S+      + + D
Sbjct: 194 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKTPADWVVVGKPQSREAYGCMVRKDD 253

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTK 293
             +  +   T   M               +   + N + +++         +     L+ 
Sbjct: 254 APFKTLADKTIAGM---------------MKDGSINAEYKKWFEQPVPPKGLNLDFPLSD 298

Query: 294 DWTYRIIRH 302
           D    +I+ 
Sbjct: 299 D-MKALIKS 306


>gi|304395669|ref|ZP_07377552.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304356963|gb|EFM21327.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 298

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 81/226 (35%), Gaps = 6/226 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
           +  L  I   G +  G     V F+         G+  D+  A+  AI         +++
Sbjct: 26  SGTLKKINDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAIKAKLNKPDLQVK 85

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   L R+      F    +  G   ++ K   I  
Sbjct: 86  MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKDGPIKD 143

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L        +    I  +   +        R  A+  D +
Sbjct: 144 FADLKGKTVVVTSGTTSEVLLHKLNDEQKLDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L   +    +P    IL    SK      + + D ++  +V  T 
Sbjct: 204 LLAGERAKAKKPDNWEILGTPQSKEAYGCMLRKDDPQFKALVDETI 249


>gi|170767654|ref|ZP_02902107.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia
           albertii TW07627]
 gi|170123142|gb|EDS92073.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Escherichia
           albertii TW07627]
          Length = 302

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   L R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPGNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIVQVQTSGEAE 263


>gi|325570409|ref|ZP_08146186.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156619|gb|EGC68796.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus casseliflavus ATCC 12755]
          Length = 269

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 99/252 (39%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54
           M K  F  ++    L   S      + +  IL + K+   +  G+      F  +  A  
Sbjct: 1   MRKKIFSFLVLAFALVTFSGCKGQSAADIDILENSKETNQIVWGVKNDTRLFGLMDIATR 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +GFD+D  RA++  I        ++ + +K R   L++  ID +      T  R+   
Sbjct: 61  EVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAIIATMTITEERKK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F  + +  GQ  ++ K   I  +  L+   ++ V  G+T+ + + +           
Sbjct: 119 QVDFSDVYFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAVNIREAAPEA----QI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  E   E   A ++ + DA   D + L  +   N     + ++ +  ++ P   AI +G
Sbjct: 175 LELENYAEAFTALQSGQGDAMITDNAILLGMASENPN---YHLVGETFTEEPYGIAINKG 231

Query: 234 DTEWYNIVSWTH 245
              + + V+   
Sbjct: 232 QKPFLDAVNQAL 243


>gi|170733526|ref|YP_001765473.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169816768|gb|ACA91351.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 306

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 92/257 (35%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V+   L      +       L  +++   +  G     V F+ V A G   GF  D
Sbjct: 13  RPLLVAACALACGASVAAEPLTGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 72

Query: 63  FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  + +A+         +++++P+ ++ R   +Q+  +D+    T     R   +   F
Sbjct: 73  LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      +     GI     L+G ++    GTT+E  L    +   M    I  + 
Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  AY  D   L  ++    +P++  ++    S       + + D ++ 
Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 250

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 251 ALVDGVLVQLMKSGEIN 267


>gi|91780195|ref|YP_555402.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91692855|gb|ABE36052.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 272

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 110/323 (34%), Gaps = 63/323 (19%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
           K +  S   + +L   S   +A  L DIKK G L+         F  V        G DV
Sbjct: 2   KIWTRSAAVVGLLLTLSGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNQIVGLDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D+ RA+++ +      ++  P N   R   L+S ++D++  N   T  R+    + F   
Sbjct: 62  DYARAVAAKLGVK---LEIQPTNPANRIAFLKSNKVDLVFANFTITDERKK--EIDFSTP 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G  FI  K   + S  QL    I    GTT E  +   F A       + ++    
Sbjct: 117 YFASGTQFIAKKG-VLKSPQQLDSLRIGADKGTTNEQQVRAQFPAA----TIVAYDDTPF 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA RA    A T D   L AL        ++ I P  IS       + + +    N+V
Sbjct: 172 AFAALRAGNVQAITQDGPKLVALLANVPDKEKYEIPPFTISNDYEGVGVPKNEARLLNVV 231

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
           + T                                            +GL  +       
Sbjct: 232 NETL-------------------------------------------VGLEAN------- 241

Query: 302 HMGNYGEMFDRNLGNQSELKIPR 324
             GN  +++D+  G  S+  +PR
Sbjct: 242 --GNAAKIYDQWFGPGSKAPLPR 262


>gi|330815541|ref|YP_004359246.1| Glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           gladioli BSR3]
 gi|327367934|gb|AEA59290.1| Glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           gladioli BSR3]
          Length = 297

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 85/244 (34%), Gaps = 6/244 (2%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +     L  IK  G +  G     + F+    N    G+  DF   +  A+  
Sbjct: 15  TFAGGAMAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQKVIGYARDFQMKVVDAVKK 74

Query: 74  D----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
                  +++ +P+ ++ R   +Q+  +DI   +T   L R+      F    +  G   
Sbjct: 75  KLNLPNLQVKDIPVTSQNRIPLVQNGTVDIECGSTTNNLERQKQAA--FSTTYFVIGTRL 132

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +  K  GI   + L G ++   AGTT+E  L        M    I  +   E        
Sbjct: 133 MTSKDSGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMSIISAKDHGESFQTLETG 192

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R  A+  D + L   +    +P   VI+    S+      + + D  +  +V      + 
Sbjct: 193 RAVAFMMDDALLAGERAKAKKPDNWVIVGTPQSEEAYGCMMRKDDPAFKAVVDGAITELE 252

Query: 250 TAEE 253
            + E
Sbjct: 253 KSGE 256


>gi|257486609|ref|ZP_05640650.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|320325614|gb|EFW81676.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327102|gb|EFW83116.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330989515|gb|EGH87618.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331010092|gb|EGH90148.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 304

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
                 +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 6   HLLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 65

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 66  DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + L        +P +  +     S       + +GD  +
Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + ++ 
Sbjct: 244 KKAVDDAIVATYKSGDIN 261


>gi|197117373|ref|YP_002137800.1| amino acid ABC transporter amino acid-binding protein [Geobacter
           bemidjiensis Bem]
 gi|197086733|gb|ACH38004.1| amino acid ABC transporter, amino acid-binding protein [Geobacter
           bemidjiensis Bem]
          Length = 264

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 82/246 (33%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L++    S          +KK G L  G++            G+  GFD
Sbjct: 1   MKKILAILSSLLVLTLAVSAFAADGSFKRVKKEGTLTIGLDDAFPPMGYRNDKGELVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     KI++ P        AL SK+ D +      T  R+  +   F  
Sbjct: 61  IDAAEEVGKRLG---IKIKWQPTAWDGVMHALNSKKFDCIWNGMTITDERKKEVA--FTK 115

Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               D     +   +K    ++ L GA + VQ G++    +     A         +E  
Sbjct: 116 PYKMDGQVAVVRFGEKKFKKLADLKGAKVGVQKGSSAVEAVKKLPAA---PAEVREYEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R D    D +          RP +  I+P  I+K P   A  + D E   
Sbjct: 173 PKALLDLESKRLDTVVIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKDDVELRE 230

Query: 240 IVSWTH 245
            V  T 
Sbjct: 231 AVQKTL 236


>gi|194099714|ref|YP_002002849.1| Putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae NCCP11945]
 gi|193935004|gb|ACF30828.1| Putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae NCCP11945]
          Length = 284

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 22/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46
           M      K    S    + L              S+ A+ +  IK++G ++ G+      
Sbjct: 1   MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V ANG  +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   
Sbjct: 61  FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQ 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R     + F         G +  K K I+ ++QL   ++ V  GT  +     +F  
Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTAADA----FFTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + F++  E   A +  R  A   D + L+A     + P+  V + ++     +
Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           APA+ +G+ +  N V+    AM
Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254


>gi|325266789|ref|ZP_08133461.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Kingella denitrificans ATCC 33394]
 gi|324981721|gb|EGC17361.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Kingella denitrificans ATCC 33394]
          Length = 293

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 8/227 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK  G ++ G+      F  + ANG  +GFDV+  R ++  +   P K++++  
Sbjct: 47  GDSLARIKAAGVIRIGVFGDKPPFGYLDANGKSQGFDVEIARNMAQDLLGSPDKVEFVLT 106

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A  R   ++S ++D+L  N   T  R     + F         G +  K   I+S+ QL
Sbjct: 107 EAANRVEYIKSGKVDVLLANFTQTPERAEV--VDFAAPYMQVALGVVSPKNAPITSIDQL 164

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V  GTT +      F  ++       +++  E   A +  R  A   D + L+A
Sbjct: 165 KGKTLLVNKGTTADAY----FTKNHSDITLQKYDQNTETFDALKDGRGVALAHDNALLWA 220

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                + P+  V +  +     +APA+ +GD      V+    AM  
Sbjct: 221 WA--KENPNFDVAIGKLGEPENIAPAVQKGDQALLAWVNSEITAMKQ 265


>gi|319407433|emb|CBI81084.1| amino-acid ABC transporter binding protein [Bartonella sp. 1-1C]
          Length = 301

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 6/248 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + I  + +            L  IK+ G +  G+     G A    NG + GF 
Sbjct: 1   MRKSFLIFIAAIFMGSTNIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    + + I      P K+ Y P+ ++ R   L++   D    +T     R       
Sbjct: 60  TEMAERIINDISKKIGQPIKVHYQPITSQNRIPLLKNGTYDFECGSTTNDSARSKEAA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +    ++ K  GI S+  L+G  +    GTT    +    +  N+ +  +  +
Sbjct: 118 FAYTTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +   +  + R DA+  D S L A    +  PS+++IL   +S  P+A  +   D  +
Sbjct: 178 DHGDSFLSLESGRADAFVMDTSILSAHIAKSRNPSDYIILDTTLSVEPIACMLRLNDKNF 237

Query: 238 YNIVSWTH 245
              ++ + 
Sbjct: 238 EQTINDSI 245


>gi|224367959|ref|YP_002602122.1| GltB1 [Desulfobacterium autotrophicum HRM2]
 gi|223690675|gb|ACN13958.1| GltB1 [Desulfobacterium autotrophicum HRM2]
          Length = 290

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 7/250 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + ++ + FTS +     L  I        G   G + F    A  +  GF 
Sbjct: 1   MRKPLLFGTILMLFMVFTSGAFAGDTLKKISDSNKFIVGARDGAIPFGFHNAENEHVGFS 60

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           +D  + L  A+      P + +   +N K R   + +  ++++      T+ RE    + 
Sbjct: 61  IDLAKELHKALEERLGKPLEFEIKVVNPKTRIPLVANGNLNMVCGAATHTVPRE--DTVD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKYHPIV 175
           F    +  G   +  K  G      LSG  I    G+T E T+ +  ++   N     +V
Sbjct: 119 FSLTFFLTGSQLLAKKSGGYMVAKDLSGKKIGAAQGSTNEKTIRNLNESGYFNPPVKLVV 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++   +   A R    +AY GD S L  +K     P  +VIL +++S  P    + + D+
Sbjct: 179 YQEHTQGMLALRNGAINAYCGDGSHLAGMKAKAMDPDNYVILGELLSYDPYGFILPENDS 238

Query: 236 EWYNIVSWTH 245
            + + V+   
Sbjct: 239 NFKDFVNEQL 248


>gi|327393114|dbj|BAK10536.1| glutamate/aspartate periplasmic- binding protein precursor GltI
           [Pantoea ananatis AJ13355]
          Length = 298

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 6/226 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
           +  L  I   G +  G     V F+         G+   +  A++ AI         +I+
Sbjct: 26  SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   L R+      F    +  G   ++ K   I  
Sbjct: 86  MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKGSPIKD 143

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++ V +GTT+E+ L        M    I  +   +        R  A+  D +
Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L   +    +P + VI+    SK      + + D ++  +V  T 
Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDTI 249


>gi|304405840|ref|ZP_07387498.1| extracellular solute-binding protein family 3 [Paenibacillus
           curdlanolyticus YK9]
 gi|304345083|gb|EFM10919.1| extracellular solute-binding protein family 3 [Paenibacillus
           curdlanolyticus YK9]
          Length = 283

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K     +  L++      S         +  +  IKK   ++ GI      F    A+
Sbjct: 1   MKKAIAGILSILLLAGLVGCSSSNDGKSAESGSIAAIKKADTIRIGIFADDAPFCYQDAD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G +KG+DVD  + ++  +  D +KI ++ +N  +R   LQ+ + D++  +   T  R   
Sbjct: 61  GTFKGYDVDLGKRIAKELLGDENKISWVVVNPADRIPYLQTDKADLMLADFTVTEERAK- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +   K  I+SV  L G ++ V  GTT +      F  +      
Sbjct: 120 -SVDFTLPYEKVSLGVVSKDKAPINSVDDLKGKTLAVNTGTTADSY----FTKNYPDVKL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  + + +   A    R DA+  D + L +           V + ++ +K  +A A+ QG
Sbjct: 175 IKIDAITDGYQALITGRADAFAQDNTLLLSWA--KKNEGYTVGVKELGNKDYIAGAVKQG 232

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           + E  + V+      +  E  
Sbjct: 233 NKELLDYVNDLIKGKLKDENF 253


>gi|257057662|ref|YP_003135494.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Saccharomonospora viridis DSM
           43017]
 gi|256587534|gb|ACU98667.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Saccharomonospora viridis DSM
           43017]
          Length = 324

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 89/223 (39%), Gaps = 9/223 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            S +  IK+RG L  G++     F       G   GFD+D  R ++ A+  +   + +  
Sbjct: 79  GSTMAKIKERGHLIVGVDQNTYLFGFPDPETGKLSGFDIDIARKIAEALLGNADAVHFKA 138

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +++ ER  AL++  +DI+ R    T   +    + F  + Y  GQ  ++        +S 
Sbjct: 139 ISSAERIDALRNGDVDIVVRTFSITC--DRLEDINFSTVYYVAGQRVLVPVGSTARGLSD 196

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L    +C    +T+   +A    A   +  P+  +   +     +  + DA + D + L 
Sbjct: 197 LGDKRVCAAKDSTSLRNIA----ASRPRPIPVAVDDWSDCLVLLQQGQVDAISTDDTILA 252

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L+  +   +   I+ +  +K      I + + +    V+   
Sbjct: 253 GLRAQDRTGT--KIVGEPFTKEYYGIGIPKENEDMVRFVNAVL 293


>gi|78357806|ref|YP_389255.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220211|gb|ABB39560.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 275

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 11/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V++   + +F  S +    +   I +   ++ GI T  +  A     G+W GFD
Sbjct: 1   MRMAKIVALAVAMTMFVASAAFAGPVYDKIMQTKKVRVGIMTDSIPGAFYNEKGEWVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +  +  ++    +N + R   LQ  +IDI   N   T  R+    + F  
Sbjct: 61  YDIATEVAKRMGVEIDRVA---VNNQTRISFLQQGRIDISVANMTHTRERDK--SIDFSI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---MKYHPIVFE 177
             +FDGQ  +  K +  +S++ + G  I    GTT+EL L    KA        + I ++
Sbjct: 116 TYFFDGQKVLAKKGQF-TSLNDMVGKKIATMQGTTSELNLKAALKAAGDPDYDKNVISYQ 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  +   A ++ R   ++ D + L         P  + ++ D +S  P    + Q D+  
Sbjct: 175 KESQCFQALQSGRVAGWSTDATILLGYAS--KTPGAYELVGDFLSDEPYGMGLPQDDSAL 232

Query: 238 YNIVSWTHYAM 248
            + V+     M
Sbjct: 233 RDAVNMAIQDM 243


>gi|238762870|ref|ZP_04623838.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           kristensenii ATCC 33638]
 gi|238698881|gb|EEP91630.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           kristensenii ATCC 33638]
          Length = 304

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 83/228 (36%), Gaps = 6/228 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77
            +A  L  IK  G +  G     V F+         G+  D+   +  AI         +
Sbjct: 30  ASADTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ ++ R   LQ+   D    +T   L R      AF    +  G   +  K   I
Sbjct: 90  VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEI 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                L+G  + V +GTT+E+ L    +  NM    I  +   +      + R  A+  D
Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMD 207

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + L   +    +P +  I+    S+      + + D  +  ++  T 
Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKALLDETI 255


>gi|187920635|ref|YP_001889667.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187719073|gb|ACD20296.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 291

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 93/254 (36%), Gaps = 7/254 (2%)

Query: 7   VSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +++    ++  ++ +    S L  I+    +  G     V F+ V  N    GF  D C 
Sbjct: 1   MALATFAVVSTSASAQETQSTLAKIRSGNSISIGHRETSVPFSYVDTNNQVIGFSQDICN 60

Query: 66  ----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               A+ +        ++++P+ ++ R   +Q+  +D+    T     R     +AF   
Sbjct: 61  RIIDAVKAKTGHPDLHVRFIPVTSQNRIPLVQNGTVDLECGVTTNLTSR--QNQVAFSDT 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +      +  K  GI   + L+G ++    GTT+E  L    +   M    I  +   E
Sbjct: 119 FFVATTRLLTRKDSGIKDFTDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R  AY  D   L   +    +P++ VI+    S       + + D E+  +V
Sbjct: 179 GRVTLETGRAVAYMMDDVLLAGARSLTAKPADWVIVGAPQSSEAYGFMLRKDDPEFKRLV 238

Query: 242 SWTHYAMVTAEELG 255
                 ++   E+ 
Sbjct: 239 DDAMVRVMKGSEIK 252


>gi|148652493|ref|YP_001279586.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
 gi|148571577|gb|ABQ93636.1| extracellular solute-binding protein, family 3 [Psychrobacter sp.
           PRwf-1]
          Length = 334

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 87/243 (35%), Gaps = 7/243 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD-- 74
            + +  ++ L  IK  G +  G     + F+ +        G+  D    +  A+ D   
Sbjct: 49  AANADASATLNKIKDSGTIVVGFRDSSIPFSYIADDPNQPLGYAHDLEMKVVDAVKDKLN 108

Query: 75  --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               KI+Y  + ++ R   +Q+  ID    +T     R+  +   F    +  G   +  
Sbjct: 109 MPDLKIRYNLITSQTRIPLVQNGTIDFECGSTTNNEERQKQVA--FSNGFFEIGTRLLTK 166

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K  GI+    L G ++   AGTT+E  +  Y     +    I  +   E        R D
Sbjct: 167 KDSGINDFEDLKGRTLVTTAGTTSERYIRQYNDEKKLGAKIISAKDHGEAFLMLEKGRAD 226

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D   L   K  +  P E  I+    S       + + D ++  IV      +  + 
Sbjct: 227 AFMMDDVLLAGEKAKSAHPEEWQIVGTPQSFEIYGCMMRKDDPQFKAIVDEALKNVYASG 286

Query: 253 ELG 255
           E+ 
Sbjct: 287 EIN 289


>gi|291326463|ref|ZP_06124623.2| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Providencia
           rettgeri DSM 1131]
 gi|291314316|gb|EFE54769.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Providencia
           rettgeri DSM 1131]
          Length = 288

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 91/241 (37%), Gaps = 10/241 (4%)

Query: 13  IILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +++   + +  A      L  IK  G +  G     V F+    +    G+  D+  A+ 
Sbjct: 1   MMILGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNSQKVVGYSQDYSNAIV 60

Query: 69  SAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A+         +++ +P+ ++ R   LQ+   D    +T   + R+      F    + 
Sbjct: 61  DAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSNTIFV 118

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
            G   +     G+   + L+G ++ V +GTT+E+ L       NMK   I  +   +   
Sbjct: 119 VGTRLLTKGDSGVKDFADLAGKNVVVTSGTTSEILLNQLNDEKNMKMRIISAKDHGDSFR 178

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              + R  A+  D + L   +    +P    I+    ++      + + D ++  ++  T
Sbjct: 179 TLESGRAVAFMMDDALLAGERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQFKALIDET 238

Query: 245 H 245
            
Sbjct: 239 I 239


>gi|298488720|ref|ZP_07006749.1| glutamate/aspartate periplasmic binding protein precursor
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156793|gb|EFH97884.1| glutamate/aspartate periplasmic binding protein precursor
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 304

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
                 +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 6   HLLGVTITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 65

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 66  DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + L        +P +  +     S       + +GD  +
Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + ++ 
Sbjct: 244 KKAVDDAIIATYKSGDIN 261


>gi|146339752|ref|YP_001204800.1| glutamate/aspartate periplasmic-binding protein [Bradyrhizobium sp.
           ORS278]
 gi|146192558|emb|CAL76563.1| Putative extracellular solute-binding protein, family 3 ; putative
           glutamate/aspartate periplasmic-binding protein
           [Bradyrhizobium sp. ORS278]
          Length = 302

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 90/252 (35%), Gaps = 9/252 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M     ++      +             L  +K+ G +  G     + F+ +  N    G
Sbjct: 1   MKTSRLLAYALFATMLAAPALAEDLTGTLQKVKETGTITIGYRETSLPFSYIDDNQKPLG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           F +D C      + + +  D  +++  P+++  R   + +  ID+   +T   L R+   
Sbjct: 61  FALDICGKIVDEIKATLKLDKLEVKLTPVSSATRIPLMANGTIDLECASTTNNLERQRL- 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +     ++     G+ ++  L G ++   +GT+    L +   A  +  + +
Sbjct: 120 -VSFSHTYFLTASRYVAKAASGLKTIDDLKGKTVASTSGTSNIKQLYEANTARQLGLNIV 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQG 233
             +   E        R DAY  D   L  L  +   PS++ I  D      P    + + 
Sbjct: 179 AAKDNAEGFLMVENGRADAYVMDDILLAGLVASAKAPSDYAISTDQFSMPEPYGIMLRKD 238

Query: 234 DTEWYNIVSWTH 245
           D  +  +V    
Sbjct: 239 DPAFKTVVDRAT 250


>gi|170293734|gb|ACB12919.1| glutamate-sensitive fluorescent reporter [synthetic construct]
          Length = 841

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 6/248 (2%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           +++L F + +   S L  I K G +  G     V F+         G+  D+  A+  A+
Sbjct: 256 MVLLEFVTAARMLSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAV 315

Query: 72  FDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
                    +++ +P+  + R   LQ+   D    +T   + R+      F    +  G 
Sbjct: 316 KKKLNKPDLQVKLIPITTQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGT 373

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             +  K   I   + L   ++ V +GTT+E+ L    +   M    I  +   +      
Sbjct: 374 RLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLE 433

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           + R  A+  D + L   +    +P    I+    S+      + + D ++  ++  T   
Sbjct: 434 SGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQ 493

Query: 248 MVTAEELG 255
           + T+ E  
Sbjct: 494 VQTSGEAE 501


>gi|329666779|gb|AEB92727.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           DPC 6026]
          Length = 262

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 91/259 (35%), Gaps = 9/259 (3%)

Query: 1   MYKDFF---VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K      + I+ L  +         +    IK RG L  G++   V     + +G   
Sbjct: 1   MKKIIRFLGLLIIVLTSVGLAGCQRQENSWQAIKSRGTLVIGVDDSFVPMDFRQKDGKLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+   I   P    +  ++   +   L++  ID++      T  RE    +A
Sbjct: 61  GFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKAREK--KVA 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVF 176
           F      + Q  +  K +GI++  Q+ G  + VQ G++    L +Y K    +    +++
Sbjct: 116 FSKPYLENDQILVTRKNEGINNYRQMRGKILGVQTGSSGTDDLDNYPKVLKKRVKSTVLY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +         +A R D    D          +    E             +  I + D  
Sbjct: 176 DTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDKT 235

Query: 237 WYNIVSWTHYAMVTAEELG 255
             N ++     +    EL 
Sbjct: 236 LKNKINQALDHLEKTGELK 254


>gi|294497132|ref|YP_003560832.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus
           megaterium QM B1551]
 gi|294347069|gb|ADE67398.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus
           megaterium QM B1551]
          Length = 271

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 11/241 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75
            +  S     L +IK RG +  G+      F       G+ +GFDVD  + L+  I  D 
Sbjct: 31  TSGSSAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPKTGEVEGFDVDISKQLAKEILGDE 90

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K+++  + +K R   LQ   ID +      T  R+    + F  + +  GQ  ++ K  
Sbjct: 91  NKVEFKEVTSKTRVPLLQKGDIDAVVATMTITDERKK--EVDFTDVYFQAGQSLLVKKGS 148

Query: 136 GISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            I SV  L  G  +    G+T+ + + +           + FE   E   A ++ + DA 
Sbjct: 149 KIKSVDDLKKGTKVLAVKGSTSAINIREKAPE----TTVLEFENYAEAFTALKSKQGDAL 204

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D + LY +    D    + ++    ++ P   A+ +G+ E  + ++     +  + + 
Sbjct: 205 TTDDAILYGM---ADEDPSYELVGKPFTEEPYGIAVKKGNKELVDALNDALKKIKDSGKY 261

Query: 255 G 255
            
Sbjct: 262 D 262


>gi|308174443|ref|YP_003921148.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607307|emb|CBI43678.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 275

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 19/251 (7%)

Query: 6   FVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56
            +S+L + +L              T    L  IK R  +  G+ T    F     + GD 
Sbjct: 12  LISLLAVFMLAACGGKETSGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFD+D  + ++  I  D  K ++  + +K R   LQ+  ID ++     T  R+    +
Sbjct: 72  EGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKK--EV 129

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F  + +  GQ  ++ K   I S   L  G+ +    G+T+   + +           + 
Sbjct: 130 DFSDVYFEAGQSLLVKKGSSIKSTEDLKKGSKVLAVKGSTSSQNIREKAP----DASVLE 185

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE   E   A +A + DA T D + LY +   N    ++ +     +  P   A+ +G +
Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGGTFTDEPYGIAVKKGQS 242

Query: 236 EWYNIVSWTHY 246
                ++ +  
Sbjct: 243 GLVKEINASLK 253


>gi|300705512|ref|YP_003747115.1| glutamate/aspartate ABC transporter periplasmic-binding protein
           [Ralstonia solanacearum CFBP2957]
 gi|299073176|emb|CBJ44534.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum CFBP2957]
          Length = 301

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 85/242 (35%), Gaps = 6/242 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFD 73
                    L  I+    +  G+    + F+   +     GF  D C     A+   +  
Sbjct: 23  AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              ++Q +P+ ++ R   +Q+  +D+    T     RE     AF    +      +   
Sbjct: 83  PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFSTTFFIAATRLLTSV 140

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             G+     L+G S+   AGTT+E  L        M  + +  +   E     ++ R  A
Sbjct: 141 NSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L   +    +P++ V+     S       + + D ++  +V  T   ++   E
Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260

Query: 254 LG 255
           + 
Sbjct: 261 IN 262


>gi|22125092|ref|NP_668515.1| glutamate and aspartate transporter subunit [Yersinia pestis KIM
           10]
 gi|45440928|ref|NP_992467.1| glutamate and aspartate transporter subunit [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595455|ref|YP_069646.1| glutamate and aspartate transporter subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808475|ref|YP_652391.1| glutamate and aspartate transporter subunit [Yersinia pestis
           Antiqua]
 gi|108811264|ref|YP_647031.1| glutamate and aspartate transporter subunit [Yersinia pestis
           Nepal516]
 gi|145599901|ref|YP_001163977.1| glutamate and aspartate transporter subunit [Yersinia pestis
           Pestoides F]
 gi|149365484|ref|ZP_01887519.1| putative amino acid-binding protein precursor [Yersinia pestis
           CA88-4125]
 gi|153950913|ref|YP_001401882.1| glutamate and aspartate transporter subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162419470|ref|YP_001606323.1| glutamate and aspartate transporter subunit [Yersinia pestis
           Angola]
 gi|165925198|ref|ZP_02221030.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937719|ref|ZP_02226281.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008368|ref|ZP_02229266.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212590|ref|ZP_02238625.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399290|ref|ZP_02304814.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167422521|ref|ZP_02314274.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423472|ref|ZP_02315225.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167467950|ref|ZP_02332654.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           FV-1]
 gi|170025231|ref|YP_001721736.1| glutamate and aspartate transporter subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894486|ref|YP_001871598.1| glutamate and aspartate transporter subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929696|ref|YP_002347571.1| glutamate and aspartate transporter subunit [Yersinia pestis CO92]
 gi|229838162|ref|ZP_04458321.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895954|ref|ZP_04511124.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|229898727|ref|ZP_04513872.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901502|ref|ZP_04516624.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|294504419|ref|YP_003568481.1| putative amino acid-binding protein precursor [Yersinia pestis
           Z176003]
 gi|21957947|gb|AAM84766.1|AE013722_5 solute-binding periplasmic protein of glutamate/aspartate ABC
           transporter [Yersinia pestis KIM 10]
 gi|45435787|gb|AAS61344.1| putative amino acid-binding protein precursor [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51588737|emb|CAH20348.1| ABC transporter, periplasmic glutamate/aspatate binding protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108774912|gb|ABG17431.1| amino acid-binding protein precursor [Yersinia pestis Nepal516]
 gi|108780388|gb|ABG14446.1| putative amino acid-binding protein precursor [Yersinia pestis
           Antiqua]
 gi|115348307|emb|CAL21238.1| putative amino acid-binding protein precursor [Yersinia pestis
           CO92]
 gi|145211597|gb|ABP41004.1| amino acid-binding protein precursor [Yersinia pestis Pestoides F]
 gi|149291897|gb|EDM41971.1| putative amino acid-binding protein precursor [Yersinia pestis
           CA88-4125]
 gi|152962408|gb|ABS49869.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162352285|gb|ABX86233.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           Angola]
 gi|165914469|gb|EDR33084.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922805|gb|EDR39956.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992750|gb|EDR45051.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206521|gb|EDR51001.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166958535|gb|EDR55556.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051794|gb|EDR63202.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057642|gb|EDR67388.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751765|gb|ACA69283.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis YPIII]
 gi|186697512|gb|ACC88141.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681431|gb|EEO77525.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|229688275|gb|EEO80346.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694528|gb|EEO84575.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229700877|gb|EEO88906.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|262362591|gb|ACY59312.1| putative amino acid-binding protein precursor [Yersinia pestis
           D106004]
 gi|262366405|gb|ACY62962.1| putative amino acid-binding protein precursor [Yersinia pestis
           D182038]
 gi|294354878|gb|ADE65219.1| putative amino acid-binding protein precursor [Yersinia pestis
           Z176003]
 gi|320016181|gb|ADV99752.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 305

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 93/257 (36%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + +L   +    + + +A          L  +K  G +  G     V F+    
Sbjct: 3   MRK-LALVLLLAGMTSSVAQAEDATAKADTAIDTLQKVKNNGVIVVGHRESSVPFSYYDN 61

Query: 53  NGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                G+  D+   +  AI  +      +++ +P+ ++ R   LQ+   D    +T   L
Sbjct: 62  QQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPLLQNGTFDFECGSTTNNL 121

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R      AF    +  G   +  K   +     L+G ++ V +GTT+E+ L    +  N
Sbjct: 122 ER--QQQAAFSNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNEKDN 179

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           M    I  +   +      + R  A+  D + L   +    +P E  I+    S+     
Sbjct: 180 MNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDEWSIVGTPQSEEAYGC 239

Query: 229 AIIQGDTEWYNIVSWTH 245
            + + D  +  ++  T 
Sbjct: 240 MMRKNDPAFKALLDKTI 256


>gi|229010071|ref|ZP_04167285.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048]
 gi|229165583|ref|ZP_04293358.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621]
 gi|228617890|gb|EEK74940.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621]
 gi|228751204|gb|EEM01016.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048]
          Length = 259

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 11/239 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           + +     +  IKKRG L  G+      F     + G  +GFD+D  +AL+  I  D  K
Sbjct: 17  TNTKQGGAVEQIKKRGKLVVGVKNDTNLFGLKNPSTGQVEGFDIDIAKALAKKILGDEKK 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++   + +K R   L++  ID +      T  R+    + F  + +  GQ  ++ K   I
Sbjct: 77  LELKEVTSKTRIPMLKNGDIDAIIATMTITEERKK--EVDFSDVYFKAGQSLLVKKGSNI 134

Query: 138 SSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
            S+  +  G  +    G+T+   +             + FE   E   A +A + D  T 
Sbjct: 135 KSIDDIKQGVKVLAVKGSTSTNNIRQKSPEA----TVLEFENYSEAFTALKAGKGDVLTT 190

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D + LY +   +     + ++  I +  P   A+ +G  +    ++     M    E  
Sbjct: 191 DNAILYGMAKQDSN---YEVVGKIFTDEPYGIAVQKGADDLTKEINSLLKDMKANGEYD 246


>gi|307708313|ref|ZP_07644780.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis NCTC 12261]
 gi|307615759|gb|EFN94965.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis NCTC 12261]
          Length = 264

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +L   +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLLGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I S+  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L             V+L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 542

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 6/253 (2%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++ L +           A  L  +   G L  GI       + +       G+ +D C  
Sbjct: 1   MAALVVFASLPALAEDLAGTLKKVGDSGTLTLGIRESSYPLSYLDDGQKPIGYHIDICTR 60

Query: 67  LSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           L+ A+         K++ LP+ ++ R   +Q+  +D+   +T     R   +   F P T
Sbjct: 61  LAEAVKTRLALPALKVETLPVTSQNRIPLVQNGTVDLECGSTTNNEARARQVA--FAPTT 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +       + K  GI+S++QL+G  + +  GTT+   +  + K  N+ +  I  +   + 
Sbjct: 119 FVTKVRMAVKKSSGITSIAQLAGKPVAITTGTTSVQLVRAHKKGQNVAFKEIYGKDHADS 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  R  A+  D + L  L  T+  P ++ I+ +++S  P+A  + + D ++  +V 
Sbjct: 179 FLLLETDRAVAFVMDDNLLAGLIATSKAPGDYAIVGEVLSVEPIAIMLRRDDPQFKALVD 238

Query: 243 WTHYAMVTAEELG 255
            T  AM+ + E+ 
Sbjct: 239 DTVKAMMASGEVE 251


>gi|73537816|ref|YP_298183.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72121153|gb|AAZ63339.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 311

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 8/254 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++     +L +  L        + +L  I+  G +  G     + F+     G   G+ V
Sbjct: 19  FRPLTALLLAVATLSPLGARAQSPVLDKIRDSGTIVLGYRESALPFSFADDKGQPAGYAV 78

Query: 62  DFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D C  ++ A    +     K+++LPL  + RF A+ +  +D+       +L R+  +   
Sbjct: 79  DLCLRVAEAARQKLGLKDIKVRWLPLTPQNRFPAVVNGLVDLDCAPNTNSLERQKQVA-- 136

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y      ++    GI S   L G ++   AG+T +  +          Y  +  +
Sbjct: 137 FSVSHYVSTVRMLVRADSGIQSFEDLRGKTVVTSAGSTGDRHVRRL--KQQYGYRDVYAK 194

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D   L  L+     PS+ VI+   +S    A  + + D EW
Sbjct: 195 DHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQFVIVGPALSTEQNALMMSKADPEW 254

Query: 238 YNIVSWTHYAMVTA 251
              V  T       
Sbjct: 255 KRFVDQTLAGTFAG 268


>gi|83746634|ref|ZP_00943684.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|207727924|ref|YP_002256318.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
 gi|207742329|ref|YP_002258721.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
 gi|83726768|gb|EAP73896.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|206591166|emb|CAQ56778.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
 gi|206593719|emb|CAQ60646.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
          Length = 298

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 96/255 (37%), Gaps = 8/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      ++L  + +  ++         L  IK  G +  G+    + F+         G
Sbjct: 1   MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60

Query: 59  FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +  A+ D       +++ +P+ ++ R   LQ+  ID+   +T   L R+   
Sbjct: 61  YSYDVATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + I
Sbjct: 119 QASFTDTIFIIGTRIMVKKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + LY  +     P++ V++    S+      + + D
Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMLRKDD 238

Query: 235 TEWYNIVSWTHYAMV 249
             +  +   T   M+
Sbjct: 239 APFKTLADKTIAGMM 253


>gi|302386907|ref|YP_003822729.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
 gi|302197535|gb|ADL05106.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
          Length = 289

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 23/258 (8%)

Query: 1   MYKDFFVSILCLIILF---------------FTSFSTNASILGDIKKRGFLKCGINTGLV 45
           M K     +L + +                     S  A  L +IK+ G +K G+ +   
Sbjct: 1   MKKKILGVLLGVTLAAGLLAGCSQAKDNPGTTGGASAKARTLSEIKEDGTIKIGVFSDKN 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F  V +NG  +G+DV F + L+  +     K +++ + A  R   L+S ++D++  N  
Sbjct: 61  PFGYVDSNGKIQGYDVYFAKRLAKDLLGSEDKAEFVYVEAASRVEYLKSAKVDVILANFT 120

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T  R+    + F         G +      IS V+QL   ++ V  GTT E      F 
Sbjct: 121 VTDERKE--QVDFALPYMKVALGVVSPDAALISDVTQLKDKTLIVVKGTTAETY----FS 174

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
            ++ +   + F+  +E   A    R DA++ D + + A           V +  I +   
Sbjct: 175 ENHQEVKLLKFDEYQEAYDALLDGRGDAFSTDNTEVLAWA--LQNKGFTVGIESIGNLDT 232

Query: 226 LAPAIIQGDTEWYNIVSW 243
           +APA+ +G+ E  + ++ 
Sbjct: 233 IAPAVQKGNKELLDWINS 250


>gi|295702498|ref|YP_003595573.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus
           megaterium DSM 319]
 gi|294800157|gb|ADF37223.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus
           megaterium DSM 319]
          Length = 271

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 11/241 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75
            +  S     L +IK RG +  G+      F       G+ +GFDVD  + L+  I  D 
Sbjct: 31  TSGSSAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPKTGEVEGFDVDISKQLAKEILGDE 90

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K+++  + +K R   LQ   ID +      T  R+    + F  + +  GQ  ++ K  
Sbjct: 91  NKVEFKEVTSKTRVPLLQKGDIDAVVATMTITDERKK--EVDFTDVYFQAGQSLLVKKGS 148

Query: 136 GISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            I SV  L  G  +    G+T+ + + +           + FE   E   A ++ + DA 
Sbjct: 149 KIKSVDDLKKGTKVLAVKGSTSAINIREKAPE----TTVLEFENYAEAFTALKSKQGDAL 204

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D + LY +    D    + ++    ++ P   A+ +G+ E  + ++     +  + + 
Sbjct: 205 TTDDAILYGM---ADEDPSYELVGKPFTEEPYGIAVKKGNKELVDALNDALKKIKDSGKY 261

Query: 255 G 255
           G
Sbjct: 262 G 262


>gi|163791792|ref|ZP_02186170.1| hypothetical protein CAT7_03744 [Carnobacterium sp. AT7]
 gi|159872938|gb|EDP67064.1| hypothetical protein CAT7_03744 [Carnobacterium sp. AT7]
          Length = 260

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 86/253 (33%), Gaps = 9/253 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +  I+    +  T       IK+ G L  G++          +NGD  GFD
Sbjct: 5   MTKVVLGLGMVGILAGCGAEETAKDSFDQIKEEGTLVVGLDDTFAPMGFRDSNGDIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +     ++++  ++   +   L+S  ID++      T  R+    + F  
Sbjct: 65  VDLANVVAEKL---DVEVEFQAIDWALKETELKSDNIDVIWNGYTITDERKK--QVDFSS 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKYHPIVFE 177
               + Q  I+ +   I +   LSG  +  Q  ++    +                +++ 
Sbjct: 120 PYLENSQIIIVLEDSDIQTKEDLSGKVVAAQQSSSAVDAINADESKIIEKFANQEVVLYP 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              ++     + R DA   D +      +  +    + +L     +   A    + D + 
Sbjct: 180 SNNDVFNDLASGRSDAIVVDETLGR-YYMKQNEEISYRVLEGNFGEEEYAVGTRKEDDKL 238

Query: 238 YNIVSWTHYAMVT 250
              ++     M T
Sbjct: 239 TEAINDALDEMKT 251


>gi|27382711|ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355883|dbj|BAC52865.1| ABC transporter amino-acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 303

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 9/260 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +   +++    ++           L +IK  G +  G     + F+ +  N    G
Sbjct: 1   MKHFRHIGLALAATFVVSQAGAQELTGTLKNIKDTGAITLGFRDSSIPFSYLDDNQKPIG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           F +D C     A+   +  D  +++  P+ +  R   + +  ID+   +T     R+  +
Sbjct: 61  FAMDICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTIDLECGSTTNNADRQKQV 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +     ++  K  G+ S+  L G ++   AGTT    L +   A  +  + I
Sbjct: 121 A--FTNTHFLTASRYVFKKSSGLKSIDDLKGKTVVSTAGTTNIKQLTEANVAKGLGANII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQG 233
             +   E        R  A+  D   L +L   +  P ++VI  D  SK  P    + + 
Sbjct: 179 PAKDHAESFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKD 238

Query: 234 DTEWYNIVSWTHYAMVTAEE 253
           D  +  +V     A+ T+ E
Sbjct: 239 DAPFKKVVDAATAALYTSGE 258


>gi|317047307|ref|YP_004114955.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316948924|gb|ADU68399.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 308

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 85/236 (36%), Gaps = 6/236 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77
              S L  I K G +  G     V F+         G+  D+  A+  AI         +
Sbjct: 34  QQVSTLEKISKNGVIVVGHRESSVPFSYYDNEQKVVGYSQDYSNAIVEAIKKKLNKPDLQ 93

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ LP+ ++ R   LQ+   D    +T   L R      AF    +  G   ++ K   I
Sbjct: 94  VKMLPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSDTIFVVGTRLLVKKGGPI 151

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              + L G ++ V +GTT+E+ L     +  M    I  +   +        R  A+  D
Sbjct: 152 KDFADLKGKTVVVTSGTTSEILLNKLNDSQKMGMRIISAKDHGDSFRTLETGRAVAFMMD 211

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            + L   +    +P    IL    S       + + D E+  ++  T     T+ E
Sbjct: 212 DALLAGERAKAKKPDNWEILGTPQSHEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 267


>gi|218887872|ref|YP_002437193.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758826|gb|ACL09725.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 275

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 11/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   + +   S +    +   I+K   ++ GI T  +  A     G+W GFD
Sbjct: 1   MRLVKLLAMASALTVLMASVAMAGPVFDRIQKEKKIRIGIMTDSIPGAFYNEKGEWGGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +  +  ++Q   +N K R   +QS QID+   N   T  R+    + F  
Sbjct: 61  YDMATEVAKRMGVEIERVQ---VNNKTRIALVQSGQIDLSVSNMTHTRERDK--SVDFSL 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---HPIVFE 177
             +FDGQ  +  K +   SV  + G  I    GTT+E+ +    K         + I F+
Sbjct: 116 TYFFDGQKILAKKGQF-KSVKDMVGKKIATMQGTTSEVNVRRALKEAGDPNAETNVISFQ 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E   A +  R   ++ D S L         P +  ++ D +S  P   A+ Q D+  
Sbjct: 175 KESECFQALQNGRVAGWSTDASILVGYAA--KTPGQFELVGDFLSDEPYGMAMPQDDSAL 232

Query: 238 YNIVSWTHYAM 248
            + V+     M
Sbjct: 233 RDAVNAAIQDM 243


>gi|70732196|ref|YP_261952.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68346495|gb|AAY94101.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 304

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS-- 76
            +     L  IK+ G +  G     + F+ +  A+G   G+  D    +  AI  D    
Sbjct: 23  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSHDIQLKIVEAIKKDLDMP 82

Query: 77  --KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 83  DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSVGIFEIGTRLLSKKD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                 + L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 141 SSYKDFADLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P++  +     S       + +GD  +   V     A   + E+
Sbjct: 201 MMDDALLAGEMAKAKKPTDWAVTGTPQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGEI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|319762438|ref|YP_004126375.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|330825711|ref|YP_004389014.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|317116999|gb|ADU99487.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|329311083|gb|AEB85498.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 300

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 9/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +   L+   F      A  L  IK  G +  G+    +  +   A+G   GF 
Sbjct: 1   MKKYL--AACALVAQGFLHVPVQAQTLEKIKASGAVTMGVRDSSIPLSYAGADGAPIGFH 58

Query: 61  VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           VD CR +     + +     + +Y  + ++ R   + +  IDI   +T  T  R+  +  
Sbjct: 59  VDICRKVLEDVQAQLGLARLETRYQLVTSQNRIPLVANGTIDIECGSTTNTQARQKEVA- 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +     +    GI SV  L+G  +    GTT+   L    +   ++   +  
Sbjct: 118 -FALTTYVEEVRLAVRADSGIRSVRDLAGKVVVATTGTTSVQHLRRKVRELGLELKDVSL 176

Query: 177 -ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R DA+  D   L A      + S   ++ ++++  P+A  + + D 
Sbjct: 177 GKDHADSFLLLESGRADAWVLDQGVLRASIANARQSSAFSVVGEVLNAEPIAIMVRKDDP 236

Query: 236 EWYNIVSWTHYAMVTAEELGI 256
            +   V  T   ++ + E+ +
Sbjct: 237 GFKRAVDVTIRKLLASGEMQV 257


>gi|328554362|gb|AEB24854.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus
           amyloliquefaciens TA208]
 gi|328912766|gb|AEB64362.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus
           amyloliquefaciens LL3]
          Length = 275

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 19/251 (7%)

Query: 6   FVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56
            +S+L + +L              T    L  IK R  +  G+ T    F     + GD 
Sbjct: 12  LISLLAVFMLAACGGKETAGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFD+D  + ++  I  D  K ++  + +K R   LQ+  ID ++     T  R+    +
Sbjct: 72  EGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKK--EV 129

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F  + +  GQ  ++ K   I S   L  G+ +    G+T+   + +           + 
Sbjct: 130 DFSDVYFEAGQSLLVKKGSSIKSTEDLKKGSKVLAVKGSTSSQNIREKAP----DASVLE 185

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE   E   A +A + DA T D + LY +   N    ++ +     +  P   A+ +G +
Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGGTFTDEPYGIAVKKGQS 242

Query: 236 EWYNIVSWTHY 246
                ++ +  
Sbjct: 243 GLVKEINASLK 253


>gi|121610312|ref|YP_998119.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121554952|gb|ABM59101.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 278

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 7/246 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            V++L L+ + FTS   +A  L D+ KRG+L  G       F      G+ +GFDVD  R
Sbjct: 10  LVAVLTLLGMCFTSL-AHADKLADVLKRGYLIVGTTGSSPPFGFKDEKGELQGFDVDMSR 68

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++ A+F DP K++++ L  + R+ ALQ+ Q+D++++    T  R + +G  F P  +  
Sbjct: 69  LIAKALFGDPQKVKFVLLGNEARWTALQTDQVDMVAQFATITPERLVRVG--FTPRYFDT 126

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   ++ K   I S + L  A + +   T  E    D  K          F  V++   A
Sbjct: 127 GMTVVVRKDSKIKSFADLDSADVTIATLTVPEQI--DLVKRMAPNARVASFATVDQQFLA 184

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R+ R  A+  D+        T+        + D         A   G+  W   +    
Sbjct: 185 LRSGRVQAFLVDLPIGMWYGATSPDARVIPGVYDGFQN--YGIAYKLGELSWKQFLDGFV 242

Query: 246 YAMVTA 251
             + T 
Sbjct: 243 TDLTTG 248


>gi|229056415|ref|ZP_04195828.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603]
 gi|228720889|gb|EEL72438.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603]
          Length = 259

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 11/239 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           + +     +  IKKRG L  G+      F     + G  +GFD+D  +AL+  I  D  K
Sbjct: 17  TNTKQGGAVEQIKKRGKLVVGVKNDTNLFGLKNPSTGQVEGFDIDIAKALAKKILGDEKK 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++   + +K R   L++  ID +      T  R+    + F  + +  GQ  ++ K   I
Sbjct: 77  LELKEVTSKTRIPMLKNGDIDAIIATMTITEERKK--EVDFSDVYFKAGQSLLVKKGSNI 134

Query: 138 SSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
            S+  +  G  +    G+T+   +             + FE   E   A +A + D  T 
Sbjct: 135 KSIDDVKQGVKVLAVKGSTSTNNIRQKSPEA----TVLEFENYSEAFTALKAGKGDVLTT 190

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D + LY +   +     + ++  I +  P   A+ +G  +    ++     M    E  
Sbjct: 191 DNAILYGMAKQDSN---YEVVGKIFTDEPYGIAVQKGADDLTKEINSLLKDMKANGEYD 246


>gi|281411813|ref|YP_003345892.1| extracellular solute-binding protein family 3 [Thermotoga
           naphthophila RKU-10]
 gi|281372916|gb|ADA66478.1| extracellular solute-binding protein family 3 [Thermotoga
           naphthophila RKU-10]
          Length = 246

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L + I+ F+       ++ +IK RG+L  G++     F  V  +G+  GFD
Sbjct: 1   MKKLLVVLVLLVSIVIFS------GVIDEIKSRGYLLVGLSADFPPFEFVDESGNIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  +   ++ + +       +L +K+ID++      T  R+  +   F  
Sbjct: 55  VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  GQ  ++ K       +   L G ++ VQ GTT ++ ++ Y          + F++
Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D       +    +  + VI   ++S      A+ + DT+  
Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221

Query: 239 NIVSWTH 245
             ++   
Sbjct: 222 EFINSVL 228


>gi|328957171|ref|YP_004374557.1| putative amino acid ABC transporter, substrate-binding lipoprotein
           precursor [Carnobacterium sp. 17-4]
 gi|328673495|gb|AEB29541.1| putative amino acid ABC transporter, substrate-binding lipoprotein
           precursor [Carnobacterium sp. 17-4]
          Length = 265

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K     IL L    ++   ++          I + G L  G++          +NG+ 
Sbjct: 1   MKKTLATMILGLGFTVLVAGCSTNEARTDSYDQIIEEGKLIVGLDDTFAPMGFRDSNGEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D    +   +  D   +++ P++   +   L +  ID++      T  R+    +
Sbjct: 61  VGFDIDLANEVGERLDLD---VEFQPIDWALKETELTNGNIDLIWNGYTITDERKK--QV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHP 173
            F      + Q  I+ +   I +   LSG  +  Q  ++    +                
Sbjct: 116 DFSSPYLENSQIIIVLEDSEIQTKEDLSGKVVAAQQSSSAVDAINADESNIIEEFANEEV 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +++    ++     + R DA   D +        N+    + +L D   +   A  + + 
Sbjct: 176 VLYPSNNDVFNDLASERSDAIVVDETLGRYYMNQNED-ISYRVLEDNFGEEEYAVGMRKE 234

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D +    ++         EE+     
Sbjct: 235 DDKLTEAINQAL------EEMKADGT 254


>gi|257455526|ref|ZP_05620758.1| extracellular solute-binding protein, family 3 [Enhydrobacter
           aerosaccus SK60]
 gi|257447095|gb|EEV22106.1| extracellular solute-binding protein, family 3 [Enhydrobacter
           aerosaccus SK60]
          Length = 359

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 96/278 (34%), Gaps = 26/278 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-------------------ILGDIKKRGFLKCGINT 42
            K   ++ + ++ L     +  +                     L  IKK G +  G   
Sbjct: 6   KKPIALATVAIMALGLAGCNKASDNKAVGTEGSQPAAAATGEKTLDKIKKSGEIVLGYRD 65

Query: 43  GLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
             + F+ +        G+  D       A+   +     K++Y  + ++ R   +Q+  +
Sbjct: 66  SSIPFSYIAGTPNQPVGYAHDLQLKIVDAVKKQLNMPDLKVRYNLVTSQTRIPLVQNGTV 125

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+   +T     R+  +   F    +  G   +  K  GI   + L G ++   AGTT+E
Sbjct: 126 DLECGSTTNNEERQKQVA--FSNGFFEIGTRLLTAKDSGIKDFADLKGKTLVTTAGTTSE 183

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +        M  + +  +   E      + R  A+  D   L   K     P++ VI+
Sbjct: 184 RFIKKLNDDKKMGINIVSAKDHGESFLMLESGRAAAFMMDDVLLAGEKAKAKDPNKWVIV 243

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               S       + + D+E+  +V     A  ++ E+ 
Sbjct: 244 GTPQSYEIYGCMMRKDDSEFKKVVDDALVATYSSGEIN 281


>gi|319899106|ref|YP_004159199.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae
           73]
 gi|319403070|emb|CBI76625.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae
           73]
          Length = 301

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 6/248 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + I+ + +   +        L  IKK G +  G+     G A    NG + GF 
Sbjct: 1   MRKSLLIFIVVISMGLTSIAHATNDTLEKIKKTGEITLGVRESS-GLAYALGNGKYTGFH 59

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    +   I      P K+ YLP+ ++ R   L++   D    +T     R       
Sbjct: 60  TEMAERIIDDISKKIGKPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSARSKEAA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +    ++ K  GI S+  L+G ++    GTT    +    +  N+ +  +  +
Sbjct: 118 FAYTTYVESVKIVVKKNSGIKSIDDLNGKTVATTTGTTAVQLIRKNKRQKNIHFKVVNGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R DA+  D S L A    +  PS+++IL   +S  P+A  +   D  +
Sbjct: 178 DHGDSFLLLESGRADAFVMDTSILSANIAKSKNPSDYIILDTTLSVEPIACMLRLNDKNF 237

Query: 238 YNIVSWTH 245
             +++ + 
Sbjct: 238 EQVINDSI 245


>gi|218249147|ref|YP_002374518.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           8801]
 gi|218169625|gb|ACK68362.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8801]
          Length = 299

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   + IL L++     + S    +L  IK+ G +  G     + F  +   G W G+
Sbjct: 1   MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +   +      P K+  + +  ++RF  ++   IDI   +T +T  R  +  +
Sbjct: 61  SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSIDIECASTTFTWERNKT--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K +GI SV  L+G  + V   TT E  +     A       ++ 
Sbjct: 119 DFTVSYFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAIKIQHPAA----QLVMV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +  +E      A   DA+  D   L  LK  +  P+   ++P+   +    A  I Q  +
Sbjct: 175 KDRKEGLQKLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQS 234

Query: 236 EWYNIVSWTHYAMVTA 251
           +W N+V+++    +  
Sbjct: 235 QWRNMVNYSLVKFMEG 250


>gi|300705161|ref|YP_003746764.1| glutamate/aspartate ABC transporter periplasmic-binding protein
           [Ralstonia solanacearum CFBP2957]
 gi|299072825|emb|CBJ44181.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum CFBP2957]
          Length = 298

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 96/255 (37%), Gaps = 8/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      ++L  + +  ++         L  IK  G +  G+    + F+         G
Sbjct: 1   MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60

Query: 59  FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +  A+ D       +++ +P+ ++ R   LQ+  ID+   +T   L R+   
Sbjct: 61  YSYDVATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + I
Sbjct: 119 QASFTDTIFIIGTRIMVKKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + LY  +     P++ V++    S+      + + D
Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMVRKDD 238

Query: 235 TEWYNIVSWTHYAMV 249
             +  +   T   M+
Sbjct: 239 APFKALADKTIAGMM 253


>gi|171059369|ref|YP_001791718.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6]
 gi|170776814|gb|ACB34953.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii
           SP-6]
          Length = 300

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 100/259 (38%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L L   F T  +     L  I+  G    G+       A    +G + GF 
Sbjct: 1   MKKTLMMAAL-LACAFVTGQARAEDTLKKIRDTGSATLGVRESSGALAYTLGDGKYVGFH 59

Query: 61  VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    +       +      I+Y  + ++ R   +Q+  +D+   +T     R+  +  
Sbjct: 60  TEMAERILGDIRKQLGLPKLDIKYQVVTSQNRIPLVQNGTVDLECGSTTNNAARQKDVA- 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +          GI+ + QLSG ++    GTT+  TL  + +A+ + +  +  
Sbjct: 119 -FAVTTYVEEVRIATKVNSGITGIGQLSGRAVATTTGTTSVQTLRRHERANGVDFKEVYG 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D   L         P ++ ++ +++S  P+A  + + D  
Sbjct: 178 KDHADSFLLLETGRADAFVMDGQILAGNISRAKNPPDYRLVGEVLSVEPIACVLRRDDPV 237

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +   V  +   M+ + EL 
Sbjct: 238 FKKAVDDSIVGMIRSGELA 256


>gi|302390116|ref|YP_003825937.1| extracellular solute-binding protein family 3 [Thermosediminibacter
           oceani DSM 16646]
 gi|302200744|gb|ADL08314.1| extracellular solute-binding protein family 3 [Thermosediminibacter
           oceani DSM 16646]
          Length = 278

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 99/273 (36%), Gaps = 32/273 (11%)

Query: 3   KDFFVSI-----LCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGLV 45
           K FF+++     +   +L  T     AS             +  IKK G L  G +    
Sbjct: 4   KKFFLTLFILVFITAAVLGVTGCGQKASQDAGSSQVEQQDTVDKIKKAGKLVIGTSADYP 63

Query: 46  GFAEVKANG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
            F   +  G   +  GFD+D  +A++  +  D   ++   +  +    A+ SK +D+   
Sbjct: 64  PFEFHQVTGGKDEIVGFDIDIAKAIAKELGVD---LEIKDMAFESIIPAVLSKTVDLGIA 120

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R     + F       GQ  I +K  G+ S   L+G +I VQ GTT E     
Sbjct: 121 GFTITEER--LKSVNFSDPYIDGGQQIITYKGSGVKSKEDLNGKTIGVQLGTTGEEIAKK 178

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A         F++V          R +A   D+    A     + P +  +  + + 
Sbjct: 179 IEGAK-----LKQFDKVGAAVLDLMNKRVEAVIVDLP--VAQAFVTNNPDKLELAGEPLD 231

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +  A  I + D +  ++V+     +  + E  
Sbjct: 232 DAAKAVVIRKEDQKLLDVVNKVIKDLKDSGEYD 264


>gi|300951156|ref|ZP_07165019.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 116-1]
 gi|300959230|ref|ZP_07171305.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 175-1]
 gi|301643929|ref|ZP_07243956.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 146-1]
 gi|331641159|ref|ZP_08342294.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           H736]
 gi|300314159|gb|EFJ63943.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 175-1]
 gi|300449559|gb|EFK13179.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 116-1]
 gi|301077699|gb|EFK92505.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 146-1]
 gi|331037957|gb|EGI10177.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           H736]
          Length = 327

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 55  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 173 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288


>gi|239816902|ref|YP_002945812.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239803479|gb|ACS20546.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 297

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 7/259 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFD 60
           +K        + +L   + +  +  L  IK+ G ++ G     + F+    A     GF 
Sbjct: 3   FKLSLAFGASIALLCGAAAAQESPTLRKIKETGTVQIGSRDTQIPFSYKTGAESAPIGFT 62

Query: 61  VDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            + C     A+ + +     +++Y  LN+  R   +Q+  +D+    T  T+ R     +
Sbjct: 63  NEICLKVVDAIKAKLGLSKIEVRYTLLNSTNRIPLVQNGTVDLDCATTTNTVQR--QQQV 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P  +       + K  GI+S++ L G ++   AG+T+   L  + K  N++   I  
Sbjct: 121 DFAPSHFVTNITAAVKKNSGINSIADLQGKTVATVAGSTSMQLLRGFRKTENIEVQEIAG 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  AY  D   L  L       +++ +L D++ + P    + + D E
Sbjct: 181 KDTADAFLLLASDRAAAYVLDDVQLAGLIANQPNAADYKLLKDVLRQEPYGIMMRKDDPE 240

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  IV      M+ +  + 
Sbjct: 241 FKAIVDQAVTEMMKSGSID 259


>gi|154686884|ref|YP_001422045.1| GlnH [Bacillus amyloliquefaciens FZB42]
 gi|154352735|gb|ABS74814.1| GlnH [Bacillus amyloliquefaciens FZB42]
          Length = 275

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 19/251 (7%)

Query: 6   FVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56
            +S+L + +L              T    L  IK R  +  G+ T    F     + GD 
Sbjct: 12  LISLLAVFMLAACGGKETSGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFD+D  + L+  I  D  K ++  + +K R   LQ+  ID ++     T  R+    +
Sbjct: 72  EGFDIDISKQLAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKK--EV 129

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F  + +  GQ  ++ K   I S   L  G+ +    G+T+   + +           + 
Sbjct: 130 DFSDVYFEAGQSLLVKKGSSIKSTEDLGKGSKVLAVKGSTSSQNIREKAP----DASVLE 185

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE   E   A +A + DA T D + LY +   N    ++ +  +  +  P   A+ +G +
Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGETFTDEPYGIAVKKGQS 242

Query: 236 EWYNIVSWTHY 246
                ++ +  
Sbjct: 243 GLIKEINASLK 253


>gi|16128638|ref|NP_415188.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89107524|ref|AP_001304.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|170080234|ref|YP_001729554.1| glutamate/aspartate ABC transporter periplasmic-binding protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170080335|ref|YP_001729655.1| glutamate/aspartate ABC transporter periplasmic-binding protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238899932|ref|YP_002925728.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|256023733|ref|ZP_05437598.1| glutamate and aspartate transporter subunit [Escherichia sp.
           4_1_40B]
 gi|301028861|ref|ZP_07192037.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 196-1]
 gi|307137272|ref|ZP_07496628.1| glutamate and aspartate transporter subunit [Escherichia coli H736]
 gi|2507365|sp|P37902|GLTI_ECOLI RecName: Full=Glutamate/aspartate periplasmic-binding protein;
           Flags: Precursor
 gi|1778573|gb|AAB40856.1| hypothetical protein [Escherichia coli]
 gi|1786876|gb|AAC73756.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|85674732|dbj|BAA35307.2| glutamate and aspartate transporter subunit [Escherichia coli str.
           K12 substr. W3110]
 gi|169888069|gb|ACB01776.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|169888170|gb|ACB01877.1| glutamate and aspartate transporter subunit, periplasmic-binding
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|238861328|gb|ACR63326.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|260450178|gb|ACX40600.1| extracellular solute-binding protein family 3 [Escherichia coli
           DH1]
 gi|299878166|gb|EFI86377.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli
           MS 196-1]
 gi|315135321|dbj|BAJ42480.1| glutamate and aspartate transporter subunit [Escherichia coli DH1]
 gi|315616423|gb|EFU97040.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli
           3431]
 gi|323938417|gb|EGB34671.1| bacterial extracellular solute-binding protein 3 [Escherichia coli
           E1520]
 gi|323943070|gb|EGB39229.1| extracellular solute-binding protein 3 [Escherichia coli E482]
 gi|323972110|gb|EGB67324.1| extracellular solute-binding protein 3 [Escherichia coli TA007]
          Length = 302

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 148 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263


>gi|289624942|ref|ZP_06457896.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289650481|ref|ZP_06481824.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867232|gb|EGH01941.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 304

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
                 +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 6   HLLGVTITAALISTPIFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 65

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 66  DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R  A+  D + L        +P +  +     S       + +GD  +
Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243

Query: 238 YNIVSWTHYAMVTAEELG 255
              V     A   + ++ 
Sbjct: 244 KKAVDDAIVATYKSGDIN 261


>gi|319943773|ref|ZP_08018054.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
 gi|319743006|gb|EFV95412.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
          Length = 274

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 8/239 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              ++L   ++  +        L  IK    ++ G+      F  + + G  +GFDV+  
Sbjct: 9   LMAALLAAGVVSGSHAMAADDGLARIKASDRIRIGVFGDKPPFGYIDSEGKSQGFDVEIA 68

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +  +  +   P K++Y+   A  R   L+S ++DI+  N   T  R     + F      
Sbjct: 69  KDFAKDLLGSPDKVEYVITEAANRVEYLKSGKVDIILANFTQTKERARV--VDFAAPYMK 126

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              G +   K  I SV++L G ++ V  GTT +      F         + +++  E   
Sbjct: 127 VSLGVVSPTKAPIKSVNELEGKTLLVNKGTTADAY----FSKKYPDISLLKYDQNTETFD 182

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A +  R  A   D + L+A     + P   V +  +     +APA+ +GD      +  
Sbjct: 183 ALKDGRGAALAHDNALLWAWA--KENPGYEVAIGQLGEPEFIAPAVKKGDDALRAWIDQ 239


>gi|94311476|ref|YP_584686.1| extracellular solute-binding protein [Cupriavidus metallidurans
           CH34]
 gi|93355328|gb|ABF09417.1| ABC-type transporter, periplasmic component, probable glutamate and
           aspartate transporter [Cupriavidus metallidurans CH34]
          Length = 310

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 105/256 (41%), Gaps = 9/256 (3%)

Query: 4   DFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             F+S+  L+       +   ++ ++  I++ G ++       V F+ + A+G   G+ V
Sbjct: 17  SVFLSLAALLTPAAIPAAQAASSPVIQRIQQTGTIRIAHRESSVPFSFI-ADGKPVGYAV 75

Query: 62  DFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D C     A+ + +     +++++P+    R  A+   + D+   +T     RE    +A
Sbjct: 76  DLCLKAADAVRAQLKMPQLRVEWVPVTPATRIPAIVDGKADLECGSTTNN--RERREQVA 133

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G   ++    GI   S L G ++    GTT    +    ++  M +  +  +
Sbjct: 134 FTIPHYIAGSRMLVKSDSGIRRWSDLRGKTVVSTTGTTPLAMIRKMDESGAMGWKVLEAK 193

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E  A   + R DA+  D   L+ L+     P+   +  D+++  P A  + + D E+
Sbjct: 194 DHAEAFAMVESGRADAFVMDDVLLFGLRANAKNPASLAVTGDLLTIEPYAIMLSKQDAEF 253

Query: 238 YNIVSWTHYAMVTAEE 253
             IV       +  +E
Sbjct: 254 KKIVDKALVNAIYDQE 269


>gi|218439818|ref|YP_002378147.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
 gi|218172546|gb|ACK71279.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
          Length = 298

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           MYK F ++ + L++   + + S    +L  I++ G +  G  T  + F      G+W G+
Sbjct: 1   MYKQFAITAITLLLTVTSQAPSWAGRVLDRIRQTGVITAGARTDAIPFGYKNEKGEWVGY 60

Query: 60  DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +   +      P K+Q + +  + RF  ++ + IDI   +T  T  RE    +
Sbjct: 61  SLDILELIRQETEKQLGKPIKLQLVEVTPENRFTKIKDQSIDIECGSTTVTWAREK--EV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K   + +V  L+G  I V   TT E  +     A       +  
Sbjct: 119 DFSVSYFASGTKLLVKKGSQLETVESLAGMRIGVIPNTTNEKAIKFQQPAA----QLVTV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E          D +  D   L  LK T    +   I+P+        A  I Q ++
Sbjct: 175 KDRLEGLQKLEKGEIDGFASDGIILEGLKQTASNSNALEIVPEYPYMYESYACVIPQDES 234

Query: 236 EWYNIVSWTH 245
           +W ++V+++ 
Sbjct: 235 QWRDLVNYSL 244


>gi|330889551|gb|EGH22212.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 304

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 7/254 (2%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCR 65
           V+I   +I      +     L  IK+ G +  G     + F+ +  A+G   G+  D   
Sbjct: 10  VAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQL 69

Query: 66  ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + F   
Sbjct: 70  KIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIG 127

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G   +  K         L G ++   AGTT+E  L        M  + I  +   E
Sbjct: 128 IFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGE 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                 + R  A+  D + L        +P +  +     S       + +GD  +   V
Sbjct: 188 SFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAV 247

Query: 242 SWTHYAMVTAEELG 255
                A   + ++ 
Sbjct: 248 DDAIVATYKSGDIN 261


>gi|73540163|ref|YP_294683.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72117576|gb|AAZ59839.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 299

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 9/256 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M      S++    LF  S          L  IK  G +  G+    + F          
Sbjct: 1   MKFAKLASLMMAAGLFCGSAQAAEQLTGTLKKIKDTGVITLGVRDSSIPFNYNLGGVRQV 60

Query: 58  GFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D       A+   +     +++ +P+ ++ R   LQ+  IDI   +T   L R+  
Sbjct: 61  GYSYDINMKIVEAIKDQLKMPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQK- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             ++F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + 
Sbjct: 120 -QVSFTDSIFIIGTRIMVKKDGGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNI 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +      + R  A+  D + LY  +     P++ +++    S+      I + 
Sbjct: 179 ISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSREAYGCMIRKD 238

Query: 234 DTEWYNIVSWTHYAMV 249
           D ++  +       M+
Sbjct: 239 DPQFKKVSDTVIAGMM 254


>gi|207727575|ref|YP_002255969.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
 gi|206590813|emb|CAQ56425.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
          Length = 301

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 6/242 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFD 73
                    L  I+    +  G+    + F+   +     GF  D C     A+   +  
Sbjct: 23  AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              ++Q +P+ ++ R   +Q+  +D+    T     RE     AF    +      +   
Sbjct: 83  PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFSTTFFIAATRLLTGV 140

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             G+     L+G S+   AGTT+E  L        M  + +  +   E     ++ R  A
Sbjct: 141 NSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L   +    +P++ V+     S       + + D ++  +V  T   ++   E
Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260

Query: 254 LG 255
           +G
Sbjct: 261 IG 262


>gi|330812332|ref|YP_004356794.1| putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380440|gb|AEA71790.1| putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 300

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 101/263 (38%), Gaps = 10/263 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56
           M K   +     ++L   + +  A     LG I     +  G     V F+ V  ++G  
Sbjct: 1   MQKITLIGCTLSLLLSVQAHANEAPPAGTLGKIASTRSITLGYRDASVPFSYVGDSSGQP 60

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+ V+    +   I          ++Y  + ++ R   +Q+  +D+   +T  T  R+ 
Sbjct: 61  MGYSVELAGKIVERIKTQLALSQLDVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +   F     +     +  K  GI S + L G ++   AGTT E  L  Y + +N +  
Sbjct: 121 QVA--FSYGFIYVKGQLLTAKDSGIHSFADLRGKNVVTTAGTTNERFLKSYNQDNNAEMF 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   E        R  A+  D + LY  +     P + V++    S+   +  + +
Sbjct: 179 IISAKDHGESFQMLETGRAAAFYMDDALLYGERAKARDPHKWVVVGQEQSREIYSCMVRK 238

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D ++  +V+ T   +  + E+ 
Sbjct: 239 DDPQFLALVNATLADLYKSGEIN 261


>gi|254492739|ref|ZP_05105910.1| antigenic protein [Neisseria gonorrhoeae 1291]
 gi|268600327|ref|ZP_06134494.1| antigenic protein [Neisseria gonorrhoeae PID18]
 gi|268681108|ref|ZP_06147970.1| antigenic protein [Neisseria gonorrhoeae PID332]
 gi|268685214|ref|ZP_06152076.1| antigenic protein [Neisseria gonorrhoeae SK-92-679]
 gi|268685588|ref|ZP_06152450.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035]
 gi|226511779|gb|EEH61124.1| antigenic protein [Neisseria gonorrhoeae 1291]
 gi|268584458|gb|EEZ49134.1| antigenic protein [Neisseria gonorrhoeae PID18]
 gi|268621392|gb|EEZ53792.1| antigenic protein [Neisseria gonorrhoeae PID332]
 gi|268625498|gb|EEZ57898.1| antigenic protein [Neisseria gonorrhoeae SK-92-679]
 gi|268625872|gb|EEZ58272.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 274

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 19/252 (7%)

Query: 8   SILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
                I +  T+            S+ A+ +  IK++G ++ G+      F  V ANG  
Sbjct: 1   MASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKN 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R     +
Sbjct: 61  QGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAE--AV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F         G +  K K I+ ++QL   ++ V  GTT +     +F   + +   + F
Sbjct: 119 DFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKLLKF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  E   A +  R  A   D + L+A     + P+  V + ++     +APA+ +G+ +
Sbjct: 175 DQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQKGNAD 232

Query: 237 WYNIVSWTHYAM 248
             N V+    AM
Sbjct: 233 LLNWVNGEIAAM 244


>gi|104784168|ref|YP_610666.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas entomophila L48]
 gi|95113155|emb|CAK17883.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Pseudomonas entomophila L48]
          Length = 290

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 10/220 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IK R  L  G+ T    F  V  +G + GFD D  R  +  +  D +K++++ +   
Sbjct: 41  LETIKARDKLIVGVFTDKPPFGFVDESGRYVGFDTDIGRRFAKELLGDENKVEFVAVEPA 100

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   LQS ++D++  N   T  R+    + F           I+     +  +  L+  
Sbjct: 101 SRIPFLQSDKVDLILANMTVTPERKE--AVDFTNPNLRVAVQAIVADGSPVQKLDDLADK 158

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +I V  GTT ++ L      ++  +  + FE+  E  AA  + R +AY  D   L++   
Sbjct: 159 TIIVTTGTTADIWLT----KNHPDWKLLKFEKNTESLAALASGRGEAYAQDNLILFSWAK 214

Query: 207 TNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTH 245
            N     + +LP ++ +  P+APA+ +G+TE  + V+   
Sbjct: 215 QNPG---YRVLPQLLGEEAPIAPAVKKGNTELRDWVNAEL 251


>gi|323467048|gb|ADX70735.1| Glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus helveticus H10]
          Length = 272

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 98/251 (39%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVS--ILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K FF+S  ++ + +   ++ S N   ++   +K    +  G+      F  +    G 
Sbjct: 1   MKKRFFLSTLLIGITLFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D  +AL+  +    +K  ++   A  +   L+++ +D +      T  RE    
Sbjct: 61  INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K   I +V  L+   + V  GTT    +  +          + 
Sbjct: 119 VDFSKPYFPAGQSIMVAKNSKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +  AA +A + DA+  D   L          S + ++    +  P   A+ +G T
Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231

Query: 236 EWYNIVSWTHY 246
           E    ++    
Sbjct: 232 EMDKQINLALT 242


>gi|83746015|ref|ZP_00943071.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|207741963|ref|YP_002258355.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
 gi|83727409|gb|EAP74531.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|206593349|emb|CAQ60276.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
          Length = 301

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 6/242 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFD 73
                    L  I+    +  G+    + F+   +     GF  D C     A+   +  
Sbjct: 23  AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              ++Q +P+ ++ R   +Q+  +D+    T     RE     AF    +      +   
Sbjct: 83  PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFSTTFFIAATRLLTGV 140

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             G+     L+G S+   AGTT+E  L        M  + +  +   E     ++ R  A
Sbjct: 141 SSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L   +    +P++ V+     S       + + D ++  +V  T   ++   E
Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260

Query: 254 LG 255
           +G
Sbjct: 261 IG 262


>gi|268602559|ref|ZP_06136726.1| antigenic protein [Neisseria gonorrhoeae PID1]
 gi|268586690|gb|EEZ51366.1| antigenic protein [Neisseria gonorrhoeae PID1]
          Length = 274

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 19/252 (7%)

Query: 8   SILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
                I +  T+            S+ A+ +  IK++G ++ G+      F  V ANG  
Sbjct: 1   MASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKN 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDV+  + L+  +   P K++++   A  R   ++S ++D++  N   T  R     +
Sbjct: 61  QGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAE--AV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F         G +  K K I+ ++QL   ++ V  GTT +     +F   + +   + F
Sbjct: 119 DFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKLLKF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  E   A +  R  A   D + L+A     + P+  V + ++     +APA+ +G+ +
Sbjct: 175 DQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQKGNAD 232

Query: 237 WYNIVSWTHYAM 248
             N V+    AM
Sbjct: 233 LLNWVNGEIAAM 244


>gi|238790776|ref|ZP_04634535.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           frederiksenii ATCC 33641]
 gi|238721134|gb|EEQ12815.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           frederiksenii ATCC 33641]
          Length = 312

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 6/228 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77
            +   L  IK  G +  G     V F+         G+  D+   +  AI         +
Sbjct: 38  ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 97

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ ++ R   LQ+   D    +T   L R      AF    +  G   +  K   +
Sbjct: 98  VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 155

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                L+G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D
Sbjct: 156 KDFKDLAGKAVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 215

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + L   +    +P +  I+    S+      + + D  + N+V  T 
Sbjct: 216 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKNLVDETI 263


>gi|220924346|ref|YP_002499648.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219948953|gb|ACL59345.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 301

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 7/256 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     ++  +     S       L  IK+ G +  G     V F+ +  N    G+ +D
Sbjct: 4   KRLLPLLVAGLAAMPASAEELTGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMD 63

Query: 63  FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C     A+ + +     +++  P+ +  R   + +  ID+   +T     R+  +   F
Sbjct: 64  ICYKIVEAVKAKLAMPNLEVKLNPVTSATRIPLMANGTIDLECGSTTNNAERQKQVA--F 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +     F+  K   ++    L G ++   +GTT    + +Y  AH      +  + 
Sbjct: 122 TNTHFLTANRFVAKKASNVNKFEDLKGKTVVSTSGTTNIKQINEYNAAHKFGMTILPAKD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237
             E        R  A+  D   L +L   +  P  ++I  D ISK  P    + + D  +
Sbjct: 182 HAEAFLMVETGRAVAFVMDDVLLASLAAGSKEPDAYMISKDAISKPEPYGIMLRKDDAPF 241

Query: 238 YNIVSWTHYAMVTAEE 253
             +      A   + E
Sbjct: 242 KKVADEATAAFYRSPE 257


>gi|309777346|ref|ZP_07672307.1| amino acid ABC transporter, amino acid-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914887|gb|EFP60666.1| amino acid ABC transporter, amino acid-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 256

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 89/248 (35%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +  L  L  T+  ++A    D   +  L  GI+           +G   GFD
Sbjct: 1   MKRIVMTMLALLCTLSLTACGSDAGKGDD---KEVLTIGIDDTFAPMGFK-KDGKLVGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+S  I      +++  ++   +   L+S  ID++      T  R+    + F  
Sbjct: 57  VELAEAVSKKIGK---SVEFQNIDWDLKETELESGNIDLIWNGYSITDERKK--QVLFSD 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178
               + Q  I   K GI + + + G ++ VQ  ++    +     F A      P  F+ 
Sbjct: 112 PYMENRQLIITTDKTGIKAKTDIKGKTLSVQKNSSAYDAVMKDKDFVADLKGGKPTQFDT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +      + R DA   D +         D   ++V+L +       A  + + DTE  
Sbjct: 172 NNDCFMDLESGRSDAIVVDETLARYYMKQQDNGVKYVVLDENFGTEEYAIGMRKDDTELC 231

Query: 239 NIVSWTHY 246
             ++    
Sbjct: 232 KEINKAMQ 239


>gi|227327385|ref|ZP_03831409.1| glutamate and aspartate transporter subunit [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 298

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L             A  L  +K  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
             +   +  A+         +++ LP+ ++ R   LQ+   D    +T   L R+     
Sbjct: 63  QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K  G+     L+G ++ V +GTT+E+ L    +   +K   I  
Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +       +  I+    S+      + + D +
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   + T+ E  
Sbjct: 241 FKKLVDDTIAEVQTSGEAE 259


>gi|197284337|ref|YP_002150209.1| glutamate and aspartate transporter subunit [Proteus mirabilis
           HI4320]
 gi|227358519|ref|ZP_03842844.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, substrate-binding protein [Proteus
           mirabilis ATCC 29906]
 gi|194681824|emb|CAR41086.1| glutamate/aspartate ABC transporter, substrate-binding protein
           [Proteus mirabilis HI4320]
 gi|227161230|gb|EEI46304.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, substrate-binding protein [Proteus
           mirabilis ATCC 29906]
          Length = 297

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 89/250 (35%), Gaps = 7/250 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  +   +S++ L              L  I     +  G     V F+         G+
Sbjct: 1   MRMRKLALSLMILGAAGAVQAEELTGTLKKINDNDIIIVGHRESSVPFSYYDNQQKVVGY 60

Query: 60  DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D       A+   +     +++ +P+ ++ R   LQ+   D    +T   L R     
Sbjct: 61  SQDYSNLIVEAVKEKLGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNLAR--QQQ 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    +  G   +  K  GI   + L+G ++ V +GTT+E+ L        M    I 
Sbjct: 119 ADFSNTIFIVGTRLLAKKDSGIKDFADLAGKNVVVTSGTTSEMLLNKLNDEKKMNMRIIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R  A+  D + L   +    +P+   I+    S+      + +GDT
Sbjct: 179 AKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPALWEIVGTPQSEEAYGCMLRKGDT 238

Query: 236 EWYNIVSWTH 245
           ++ +++  T 
Sbjct: 239 QFKSLIDETI 248


>gi|153939947|ref|YP_001389817.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|152935843|gb|ABS41341.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           Langeland]
 gi|295317904|gb|ADF98281.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           230613]
          Length = 267

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 88/254 (34%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     S   + L DI  +G    G++            G+
Sbjct: 1   MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDINAKGEFVVGLDDSFPPMGFKNDKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +      + + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEVI 247


>gi|170755905|ref|YP_001780101.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum B1 str. Okra]
 gi|169121117|gb|ACA44953.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum B1 str.
           Okra]
          Length = 267

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 88/254 (34%), Gaps = 12/254 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    F  ++  +I   T     S   + L DI  +G    G++            G+
Sbjct: 1   MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDINAKGEFVVGLDDSFPPMGFKNDKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +      + + P+      L+L +K ID++      T  R+    
Sbjct: 61  IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  +++    I S   L+  ++ +Q G+++E+ L               
Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E     +A R D     +  +      + +P+   +L +            + D 
Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233

Query: 236 EWYNIVSWTHYAMV 249
            +   V      ++
Sbjct: 234 SFREAVDKALDEVI 247


>gi|124265636|ref|YP_001019640.1| amino-acid ABC transporter binding protein [Methylibium
           petroleiphilum PM1]
 gi|124258411|gb|ABM93405.1| amino-acid ABC transporter binding protein [Methylibium
           petroleiphilum PM1]
          Length = 297

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 10/259 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L     T  +     L  +K  G +  G+       +       + G+ 
Sbjct: 1   MKKSLLILVTALAA---TGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYH 57

Query: 61  VDFCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           V  C      +  A+     K+ Y P+ ++ R   +Q+  +D+   +T     R+  +  
Sbjct: 58  VAICEKAVEDIEKAV-GRKLKVNYQPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVA- 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   T+ +     +    GI S++ L G ++    GTT+  TL    +A NM++  +  
Sbjct: 116 -FANTTFVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRKNKRAENMEFKEVFG 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R D +  D S L  L   +  P++  I+ +++S  P+A  + + D  
Sbjct: 175 KDHSDSFLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEA 234

Query: 237 WYNIVSWTHYAMVTAEELG 255
              +V+ T   MV + E+ 
Sbjct: 235 LLKLVNATIAGMVKSGEIN 253


>gi|291276583|ref|YP_003516355.1| putative amino acid transporter periplasmic solute-binding protein
           [Helicobacter mustelae 12198]
 gi|290963777|emb|CBG39612.1| putative amino-acid transporter periplasmic solute-binding protein
           [Helicobacter mustelae 12198]
          Length = 272

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K  F+ I+ + ++F+   S     S    IK++G L+ G+ +    F  V A G++ G
Sbjct: 1   MKKFAFLFIIFMTMMFWGCSSDKEKQSNFDLIKQKGVLRVGVFSDKPPFGYVDAKGEFDG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV   + ++  +  +  ++++ P+ A  R   L+S ++D++  N   T  R     + F
Sbjct: 61  FDVYIAKRIAKDLLGEKGRVEFYPVEAAARIEFLKSGKVDLIMANFTKTKERAEV--VDF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    G +  K   I+++SQL   ++ V  GTT +      F  ++ +   + +++
Sbjct: 119 AKPYMKVSLGVVS-KNGEITTISQLKDQTLIVDRGTTADFY----FSKNHPEVKLLKYDQ 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A ++ R  A   D + L+A       P   V + ++ ++  +APAI++GD ++ 
Sbjct: 174 NTEAFLALKSDRGVALAHDNTLLFAWAKQ--NPPFAVGIAELGNQDVIAPAIVKGDAKFL 231

Query: 239 NIVSWTHY 246
           + ++    
Sbjct: 232 DWLNQEIT 239


>gi|120608912|ref|YP_968590.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120587376|gb|ABM30816.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 305

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 8/255 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFC- 64
           V   CL+     + +     L  IK+ G +  G     + F+   K  GD  GF  D C 
Sbjct: 15  VLGACLLAHGAAASAQEIDTLARIKQTGVIHIGNRDSSIPFSYSPKGGGDPVGFSNDICL 74

Query: 65  ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               A+ + +     ++QY  LN+  R   +Q+  +D+    T  +++R+  +   F P 
Sbjct: 75  KIVEAVKAKLGLPALRVQYTLLNSLNRIPLMQNGTVDLDCATTTNSVVRQQMVA--FAPS 132

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G    + K  GI+S+S L+G ++   AG+T+   L  Y +A  +    +  +   +
Sbjct: 133 HFVAGITVAVKKNSGINSLSDLAGKTVATVAGSTSVQLLRTYKRAEALDVRELSGKDTAD 192

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNI 240
                   R DAY  D   L  L  ++  P E+ +L D++  + P      + D ++  +
Sbjct: 193 AFLLLANGRADAYVLDDVQLAGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEAL 252

Query: 241 VSWTHYAMVTAEELG 255
           V  T   ++ + E+ 
Sbjct: 253 VDETVTQLMKSGEME 267


>gi|225019520|ref|ZP_03708712.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum
           DSM 5476]
 gi|224947741|gb|EEG28950.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum
           DSM 5476]
          Length = 282

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 12/247 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IK+RG ++ G+ +    F  + +NG+ +G+DV   + L+  +  D SK++++ + A 
Sbjct: 35  LESIKERGTIRIGVFSDKPPFGYIDSNGENQGYDVYLAKRLAKDLLGDESKVEFVLVEAA 94

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   LQS ++D+L  N   T  R     + F         G ++ K  GI+SV QL G 
Sbjct: 95  SRVEYLQSNKVDLLLANFTVTKERAE--QVDFANPYMKVALGIVL-KDGGITSVDQLKGK 151

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           ++ V  GTT E      F  +    + + F++  E   A +  R DA   D + L+A   
Sbjct: 152 TLAVNKGTTAETY----FTENYPDINLLKFDQNTETFQALKDGRADALAHDNTLLFAWA- 206

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
            N+     V +  + S   +APA+ +G+ E  + V+          E     KN  +   
Sbjct: 207 -NENDGFEVGVSSLGSHDTIAPAVKKGNDELRSWVNDEL---AKLGEEKFMHKNYQETLL 262

Query: 267 DTTNPDV 273
                D+
Sbjct: 263 PYYGDDI 269


>gi|75765505|pdb|1XT8|A Chain A, Crystal Structure Of Cysteine-Binding Protein From
           Campylobacter Jejuni At 2.0 A Resolution
 gi|75765506|pdb|1XT8|B Chain B, Crystal Structure Of Cysteine-Binding Protein From
           Campylobacter Jejuni At 2.0 A Resolution
          Length = 292

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 11/250 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           + L  IK+ G ++ G+      F  V   G+ +G+D+   + ++  +F D +K+Q++ + 
Sbjct: 35  NSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVE 94

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A  R   L+S ++DI+  N   T  R     + F         G  + K   I+SV  L 
Sbjct: 95  AANRVEFLKSNKVDIILANFTQTPQRAE--QVDFCSPYMKVALGVAVPKDSNITSVEDLK 152

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             ++ +  GTT +      F  +      + +++  E  AA    R DA + D + L+A 
Sbjct: 153 DKTLLLNKGTTADAY----FTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAW 208

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
               D P   + + ++ +K  +APA+ +GD E    +       +   +     K  ++ 
Sbjct: 209 --VKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLI---IKLGQEQFFHKAYDET 263

Query: 265 SKDTTNPDVQ 274
            K     DV+
Sbjct: 264 LKAHFGDDVK 273


>gi|167576714|ref|ZP_02369588.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis TXDOH]
          Length = 299

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +         +  L  I+  G +  G+    V F+         G
Sbjct: 2   MKPFRPLLSIAVGCALAAAAHAEDASPTLKKIRDTGVVTLGVRESSVPFSYYDQRQQTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I  +       ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I  K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI             + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|172060589|ref|YP_001808241.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171993106|gb|ACB64025.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 292

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 93/249 (37%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M      + L    L       +A  L DIKK G L+         F  V A  +   G 
Sbjct: 22  MKIHTLATWLVGAALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKNNHIVGL 81

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 82  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 136

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  +    GTT E+TL + F         + ++  
Sbjct: 137 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 191

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 192 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 251

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 252 FVNDTLKGL 260


>gi|121593036|ref|YP_984932.1| extracellular solute-binding protein [Acidovorax sp. JS42]
 gi|120605116|gb|ABM40856.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 299

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 105/254 (41%), Gaps = 8/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + + ++    ++F+     L  IK  G +  G+     G      NG + GF 
Sbjct: 1   MKKHLLAAAITVLA-AGSAFAQANDTLAKIKSTGAVTLGVRESS-GLGYTLGNGKYVGFH 58

Query: 61  VDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    + +     +     +I+Y P+ ++ R   + +  +DI   +T     R+  +  
Sbjct: 59  TEMGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKEVA- 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +     ++ K GI+ +  L+G +I    GTT+  TL  + +A  + +  ++ 
Sbjct: 118 -FAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKHKRADGLNFKEVMG 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D S L A    +  PS+  I+ +++S  P+A  I + D  
Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKNPSDFKIVGEVLSVEPIACMIRKDDPA 236

Query: 237 WYNIVSWTHYAMVT 250
           +   V  +    + 
Sbjct: 237 FKKAVDDSIKRQIA 250


>gi|304317592|ref|YP_003852737.1| extracellular solute-binding protein family 3
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302779094|gb|ADL69653.1| extracellular solute-binding protein family 3
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 258

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 16/260 (6%)

Query: 1   MYKDFFVSILCLIILFF-TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K   +S+  +++L    S  +  S L  +KK G +  G +     F     V      
Sbjct: 1   MKKVLIISLSLIVMLSIILSGCSKQSTLSRVKKSGVIVMGTSADFPPFEFHKVVNGKDTI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD   A++  +      ++   ++      ALQS QID+     + T  R+    +
Sbjct: 61  MGFDVDLANAIAKKLGVK---LEIKDMDFTGLIPALQSGQIDMAIAGMNATPDRKK--NV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y   Q  ++     I+++  L+G ++ VQ GTT+     D         +    
Sbjct: 116 DFSDEYYNSEQVLVVKSSSSINNLKDLNGKTVAVQLGTTS-----DDAAKKIKGINLNEL 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235
            R+ +   +    R DA   + +   A         + + + +I    P  + A+ +G+ 
Sbjct: 171 NRLGDAFLSLENGRVDAILMESTIANAYLKEYKD-MKMLHVKEINEAVPGYSVAVAKGNQ 229

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +  N ++     +  + E G
Sbjct: 230 DLVNQINSVIKELKDSGEYG 249


>gi|206560032|ref|YP_002230796.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198036073|emb|CAR51967.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 271

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M  +   + L  + L     + +A  L DIKK G L+         F  V A      G 
Sbjct: 1   MKINTLATWLIGVALVTAGTAAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  +    GTT E+TL + F         + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 231 FVNDTLKGL 239


>gi|238920803|ref|YP_002934318.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella
           ictaluri 93-146]
 gi|238870372|gb|ACR70083.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella
           ictaluri 93-146]
          Length = 300

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 7/245 (2%)

Query: 14  ILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +   T  + + S  L  IK  G +  G     V F+         G+  D+  A+  A+ 
Sbjct: 17  LFATTQGAADGSPTLQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVK 76

Query: 73  DD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                   +++ LP+ ++ R   LQ+   D+   +T     R     +AF    +  G  
Sbjct: 77  KQLNLPTLQVKLLPITSQNRIPLLQNGTYDVECGSTTHNAER--QQQVAFSNTLFIVGTR 134

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  ++ G+     L+G  + V +GTT+E+ L    +   M+   I  +   +      +
Sbjct: 135 LLTARESGVHDFRDLAGKPVVVTSGTTSEIMLNRMNEKDGMQMRIISAKDHGDAFRTLES 194

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            R  A+  D + L   +    +P   VI+    S       + + D  +  +   T   +
Sbjct: 195 GRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRRDDPAFKKLADDTIAHV 254

Query: 249 VTAEE 253
            T+ +
Sbjct: 255 QTSGQ 259


>gi|227114975|ref|ZP_03828631.1| glutamate and aspartate transporter subunit [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 298

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L             A  L  +K  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
             +   +  A+         +++ LP+ ++ R   LQ+   D    +T   L R+     
Sbjct: 63  QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K  G+     L+G ++ V +GTT+E+ L    +   +K   I  
Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +       +  I+    S+      + + D +
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   +  + E  
Sbjct: 241 FKKLVDDTIAEVQASGEAE 259


>gi|167838586|ref|ZP_02465445.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis MSMB43]
          Length = 299

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +         +  L  ++  G +  G+    V F+         G
Sbjct: 2   MKPLRPLLSIAIGCALAAAAHADDASPTLKKVRDTGVVTLGVRESSVPFSYYDQQQQTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I  +       ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKELNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     +  R  A+  D   LY  K     P ++ I  +          + + D
Sbjct: 180 SAKDHADAFLNVKNGRAVAFFMDEPLLYGAKAKEANPGDYAITGNSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|325518275|gb|EGC98022.1| extracellular solute-binding protein [Burkholderia sp. TJI49]
          Length = 271

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L  + L     + +A  L DI+K G L+         F  V A      G 
Sbjct: 1   MKIHTLAAWLVGVALVTAGTAAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +A++  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKAIADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  +    GTT E+TL + + +       + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKYPSA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAMVTAE 252
            V+ T   +  + 
Sbjct: 231 FVNDTLKGLEASG 243


>gi|260102758|ref|ZP_05752995.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus helveticus DSM 20075]
 gi|260083428|gb|EEW67548.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus helveticus DSM 20075]
          Length = 272

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K FF+S L     L  L   S +   ++   +K    +  G+      F  +    G 
Sbjct: 1   MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D  +AL+  +    +K  ++   A  +   L+++ +D +      T  RE    
Sbjct: 61  INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K   I +V  L+   + V  GTT    +  +          + 
Sbjct: 119 VDFSKPYFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A + DA+  D   L          S + ++    +  P   A+ +G T
Sbjct: 175 FDDYGQAFTALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231

Query: 236 EWYNIVSWTHY 246
           E    ++    
Sbjct: 232 EMDKQINLALT 242


>gi|307710649|ref|ZP_07647082.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis SK564]
 gi|307618592|gb|EFN97735.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis SK564]
          Length = 264

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTNPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L             V+L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 SDYLDTLVTKW 241


>gi|300718266|ref|YP_003743069.1| polar amino acid ABC transporter, periplasmic ligand binding
           protein [Erwinia billingiae Eb661]
 gi|299064102|emb|CAX61222.1| polar amino acid ABC transporter, periplasmic ligand binding
           protein [Erwinia billingiae Eb661]
          Length = 271

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M ++   +++ L +L      T+A  L DIK RG L  GI      +  + A G   GF+
Sbjct: 1   MKRN--RALMALSLLIMAPVITHADTLSDIKSRGVLTVGIKNDYPPYGFMNAEGKTVGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R++++ +   P KI+ +P+NA  R   LQS QID++      T  R     + F  
Sbjct: 59  VDLARSIAANLLGSPDKIKLVPVNASNRIQFLQSGQIDLIMATLGVTPERAK--EIDFTV 116

Query: 121 ITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 G   +  K+   +   QL G  IC   G+    TL             + F  +
Sbjct: 117 EYVSAAGPSVMARKEAKFNQWEQLKGQKICGIQGSYYNKTLTQ-----KYGIQLVNFTAL 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A + +RC A   D   L   KL     S++ I        P+A  + +GD  + N
Sbjct: 172 PEAYRALQDNRCVAMVFDDMTLQ-NKLGEPGWSDYKIAIKPYEFLPMAGGLRKGDEAFKN 230

Query: 240 IVSWTH 245
            V+   
Sbjct: 231 AVNAAI 236


>gi|259909117|ref|YP_002649473.1| glutamate and aspartate transporter subunit [Erwinia pyrifoliae
           Ep1/96]
 gi|224964739|emb|CAX56256.1| Glutamate/aspartate periplasmic-binding protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283479144|emb|CAY75060.1| putative glutamate/aspartate ABC transport system, periplasmic
           component [Erwinia pyrifoliae DSM 12163]
          Length = 309

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 94/270 (34%), Gaps = 20/270 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVGF 47
           M        L L  +         +              L  I K G +  G     V F
Sbjct: 1   MKFRKLGLCLALAGIASGIAHAEDAKAPAAADAQQQTHTLEKIAKSGVIVVGHRESSVPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103
           +         G+  D+  A+ +AI         +++ LP+ ++ R   LQ+   D    +
Sbjct: 61  SYYHNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T   + R+     +F    +  G   ++ K   I   + L G ++ V +GTT+E+ L   
Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGGVIKEFADLKGKTVVVTSGTTSEILLNKL 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                M    +  +   +      + R  A+  D + L   +    +PSE  IL    S 
Sbjct: 179 NDEQKMGIRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSH 238

Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252
                 + +GD E+  ++  T   A  + E
Sbjct: 239 EAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268


>gi|319791947|ref|YP_004153587.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315594410|gb|ADU35476.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 304

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 5/234 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L   ++ G +  G     V F+ + A  +  G+ ++ CRAL +AI    +    I+++
Sbjct: 36  GTLAKARETGAITIGYRESSVPFSYLNARKEPIGYSIELCRALVTAIEDTVNKSLTIKWV 95

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+ +  R  A+ S Q+D+   +T   L R+    ++F P  +  G   ++ K   I S  
Sbjct: 96  PVTSDSRIDAVASGQVDLECGSTTNNLERQKR--VSFSPTMFVSGTKVLVKKGAPIKSFR 153

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  + V AGTT E TL D  +   +  +  V     E     ++ + DA+  D   L
Sbjct: 154 DLAGKKVAVTAGTTNEKTLRDLSEKFKLGINLQVARDHAESFGLVKSGQADAFATDDVLL 213

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           Y L   +   +++ ++ D +S  P      +GD +   +V+ T   +    E+ 
Sbjct: 214 YGLIAQDAAKADYEVVGDFLSYDPYGIMYRKGDAQLAKVVNDTFQVLAEDGEIE 267


>gi|241114113|ref|YP_002973588.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
 gi|240868686|gb|ACS66344.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 295

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 8/259 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++   L  +  ++ +     L  IK+ G +  G     + F  +  +    G+ 
Sbjct: 1   MIR--LLAFAALATVLGSATAQETGTLAKIKQTGVMTLGAREASIPFNYLDDHQRQAGYA 58

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    ++ A+         +I+ + L  + R   + ++ +D+   +T   L R+  +  
Sbjct: 59  WELSTRIADAVKRQLKLPKLEIKEINLTPQTRVALVANQTVDLECSSTTNNLERQKQVA- 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K  GI   + L G ++ V AGTT E  L      +    + I+ 
Sbjct: 118 -FSNTFFIVGARLLVRKNSGIQHWADLIGKNVVVSAGTTGERLLRKLNVENRWGINIILA 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           + + E        R  A   D   LY+       PS   ++     +      + + D  
Sbjct: 177 KDINENFLTVETGRAVASMQDDIILYSNIARAKDPSMWEVVGMPQQREAYGCMLRKDDPA 236

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T  AM+ + E+ 
Sbjct: 237 FKKLVDDTIAAMMKSGEME 255


>gi|240850842|ref|YP_002972242.1| glutamate-aspartate ABC transporter periplasmic component GltI
           [Bartonella grahamii as4aup]
 gi|240267965|gb|ACS51553.1| glutamate-aspartate ABC transporter periplasmic component GltI
           [Bartonella grahamii as4aup]
          Length = 301

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + I    I F +        L  IK+ G +  G+     G A    N  + GF 
Sbjct: 1   MKKSLLMFIAATAIGFTSVAHAEHDTLEKIKRTGEITLGVRESS-GLAYALGNNKYVGFH 59

Query: 61  VDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    +   I      P KI YLP+ ++ R   L++K  D    +T   + R       
Sbjct: 60  TEMAERIIDDISKKIAKPIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIARSKEAA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +     + K   I S+  L+G ++    GTT+   +    +A N+++  +  +
Sbjct: 118 FAYTTYIEEVRIAVKKNSNIKSLDDLNGKTVATTTGTTSVQLIRKNKRAKNIQFKVLKGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + + DA+  D S L      +  PS++VIL  ++S  P+A  +   D ++
Sbjct: 178 DHGDSFLLLESGKADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLNDKKF 237

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++ +    +  E L 
Sbjct: 238 EQTINDSIVRQIKDESLE 255


>gi|221065073|ref|ZP_03541178.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|264680314|ref|YP_003280224.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni CNB-2]
 gi|299532720|ref|ZP_07046108.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni S44]
 gi|220710096|gb|EED65464.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|262210830|gb|ACY34928.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni CNB-2]
 gi|298719355|gb|EFI60324.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni S44]
          Length = 299

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 8/249 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I    +   T F+     L  IK  G +  G+     G      NG + GF 
Sbjct: 1   MKKHLL-AIAVTALATGTVFAQANDTLAKIKSTGSVTLGVRESS-GLGYTLGNGKYVGFH 58

Query: 61  VDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +      + +   +     +++Y P+ ++ R   +Q+  +DI   +T     R+     
Sbjct: 59  TEMGERILKDIQKQLGLTALEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNTARQKDAAF 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF   TY +          GI+ +  L+G +I    GTT+  TL    +A  + +  ++ 
Sbjct: 119 AFT--TYVEEVRIATRANSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D S L A    +  P+++ I+ +++S  P+A  + + D  
Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKAPNDYKIVGEVLSVEPIACMMRKDDPA 236

Query: 237 WYNIVSWTH 245
           +   V  + 
Sbjct: 237 FKKAVDESI 245


>gi|83745670|ref|ZP_00942728.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|83727747|gb|EAP74867.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
          Length = 319

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  L++    +   ++S L  IK  G ++       V F+ + A G   G+ 
Sbjct: 24  MLPRVRKLLPALLVFPLMNAVASSSTLDRIKATGAIRLAHRESSVPFSYLDAGGKPIGYS 83

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +D C  L  AI ++      K+QY+ +    R  A+ + + D+   +T     RE    +
Sbjct: 84  MDLCMRLVDAIRENLKRPDLKVQYVQVTPATRMDAIMNGKADLECAST--NNARERREKV 141

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF    Y      ++    GI  +  L G ++    G+     +    +A  +    +  
Sbjct: 142 AFTIPHYIANGRMLVKTASGIQKLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEA 201

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               +  A     +  A+  D   L  +K T   P+++ I+       P A  + + D E
Sbjct: 202 SDHAQSFAMLADGKAQAFAMDDVLLAGMKATAKNPADYAIVGKTQQVVPYAIMLNKNDPE 261

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  ++      ++   E  
Sbjct: 262 FKKLIDAAMSRLMEDGEAE 280


>gi|225163910|ref|ZP_03726202.1| extracellular solute-binding protein family 3 [Opitutaceae
           bacterium TAV2]
 gi|224801487|gb|EEG19791.1| extracellular solute-binding protein family 3 [Opitutaceae
           bacterium TAV2]
          Length = 269

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 15/258 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASIL-----GDIKKRG--FLKCGINTGLVGFAEVKA 52
           M K   + ++ L   L F +     S           K G   +  G++           
Sbjct: 1   MKKRIALGLMALTASLLFAACGQKESTSPSGADQTAPKPGARKIIVGLDDNFPPMGFRNE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                GFD+D  R     +  +   +++ P++   +   L  K++D L      T  R+ 
Sbjct: 61  QNQIVGFDIDMAREAGKRMGIE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +G  F      + Q  ++  K GI + + L+G ++ VQ G++    +            
Sbjct: 118 KIG--FTTPYMENHQIIVVTTKSGIKNKAGLAGKTVGVQEGSSAVQAVEKDADVRKTFRD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              F           A R DA   D   +     T  +P+E+V+L +            +
Sbjct: 176 LKAFGDNVTALMDLSAGRLDAVVVDE--VVGRYYTAKKPAEYVVLTEHFGTEDYGVGTRK 233

Query: 233 GDTEWYNIVSWTHYAMVT 250
            DTE    +     AM  
Sbjct: 234 DDTELLGKLQNALDAMKQ 251


>gi|328462032|gb|EGF34212.1| glutamine ABC transporter [Lactobacillus helveticus MTCC 5463]
          Length = 272

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K FF+S L     L  L   S +   ++   +K    +  G+      F  +    G 
Sbjct: 1   MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D  +AL+  +    +K  ++   A  +   L+++ +D +      T  RE    
Sbjct: 61  INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K   I +V  L+   + V  GTT    +  +          + 
Sbjct: 119 VNFSKPYFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A + DA+  D   L          S + ++    +  P   A+ +G T
Sbjct: 175 FDDYGQAFTALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231

Query: 236 EWYNIVSWTHY 246
           E    ++    
Sbjct: 232 EMDKQINLALT 242


>gi|257062232|ref|YP_003140120.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
 gi|256592398|gb|ACV03285.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
          Length = 299

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   + IL L++     + S    +L  IK+ G +  G     + F  +   G W G+
Sbjct: 1   MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +   +      P K+  + +  ++RF  ++   +DI   +T +T  R  +  +
Sbjct: 61  SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSLDIECASTTFTWERNKT--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K +GI SV  L+G  + V   TT E  +     A       ++ 
Sbjct: 119 DFTVSYFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAIKIQQPAA----QLVMV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +  +E      A   DA+  D   L  LK  +  P+   ++P+   +    A  I Q  +
Sbjct: 175 KDRKEGLQKLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQS 234

Query: 236 EWYNIVSWTHYAMVTA 251
           +W N+V+++    +  
Sbjct: 235 QWRNMVNYSLVKFMEG 250


>gi|325576799|ref|ZP_08147414.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161005|gb|EGC73123.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 285

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  I+K G ++ G+ +    F  V A G  +GFDV+  +A+   +  D +K++
Sbjct: 33  GAKTVSSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVE 92

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++ ++A  R   L SK++DI+  N   T  R+    + F         G +      I+ 
Sbjct: 93  FVLVDAANRAEYLLSKKVDIILANFTVTPARKEV--VDFANPYMKVALGVVSKDGSVITD 150

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           + QL G ++ V  GTT ++    +F  +      + FE+  E   A R  R DA + D +
Sbjct: 151 LEQLKGKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNT 206

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            L+A       P   V + +   +  +APA+ +   E  N ++    
Sbjct: 207 FLFAWAKQ--NPGYTVGVKNFGDQDVIAPAVRKDAPELLNWLNNEIQ 251


>gi|186473553|ref|YP_001860895.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184195885|gb|ACC73849.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 302

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 95/265 (35%), Gaps = 12/265 (4%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     +++        T+    A      L  I+    +  G     V F+ V +N 
Sbjct: 1   MNRLTSLALALCVAAPCLTTTTGAAAQETQPTLAKIEAANLIAIGHRETSVPFSYVDSNN 60

Query: 55  DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              GF  D C  +  A+         +++++P+ ++ R   +Q+  +D+    T     R
Sbjct: 61  QVIGFSQDLCNRIIDAVKVKTHKPNLQVRFIPVTSQNRISLVQNGTVDLECGVTTNLTSR 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                +AF    +      +  K  GI     L+G ++    GTT+E  L    +   M 
Sbjct: 121 --QNQVAFGDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEEKKMN 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   E        R  AY  D   L   +    +P++ VI+    S       +
Sbjct: 179 MQIISAKDYGEGRMTLETGRAAAYMMDDVLLAGTRTLTAKPADWVIVGTPQSSEAYGFML 238

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255
            +GD  +  IV  T   ++ + E+ 
Sbjct: 239 RKGDPAFLKIVDDTLAQVMKSGEID 263


>gi|330432864|gb|AEC17923.1| cystine transporter subunit [Gallibacterium anatis UMN179]
          Length = 280

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 14/248 (5%)

Query: 2   YKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
            K         + L  T+           S L  I++ G ++ G+ +    F  V   G 
Sbjct: 5   KKLTAALFATTLALGLTACDDNDKADGAKSQLAQIQEAGKVRIGVFSDKPPFGYVDGQGK 64

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GFDV+  + ++  +  D +K +++ + A  R   L S ++DI+  N   T  R+    
Sbjct: 65  SQGFDVEIGKEIAKDLVGDENKAEFVLVEAANRAEYLLSNKVDIILANFTVTPARKEV-- 122

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G +  +   I+ + QL+  ++ V  GTT +     +F  +      + 
Sbjct: 123 VDFANPYMKVALGVVSKEGSVITDIQQLTDKTLLVNKGTTADA----FFTKNYPNIKLLK 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE+  E   A +  R DA   D + L+A     + P   V +  +  +  +APA+ +   
Sbjct: 179 FEQNTETFDALKDGRGDALAHDNTLLFAWA--KNNPGYTVGVRSLGEQEFIAPAVQKNQP 236

Query: 236 EWYNIVSW 243
           E    ++ 
Sbjct: 237 ELLKWLND 244


>gi|307133280|ref|YP_003885296.1| cystine-binding protein [Dickeya dadantii 3937]
 gi|306530809|gb|ADN00740.1| Cystine-binding protein [Dickeya dadantii 3937]
          Length = 278

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/328 (19%), Positives = 108/328 (32%), Gaps = 66/328 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K   V  L   ++   + +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKSLLVFSLLAGLVSL-AGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L SK++D+++ N   T  R     + F 
Sbjct: 60  DVDVAEAIGKALGVK---VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI HK   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 115 VPYFATGQKFIAHKG-VLKTPDDIKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
                A R     A T D + L  L          +  I P  I+K      I +G+   
Sbjct: 170 PLAFTALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGIGIPKGEDRL 229

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              V+                                  L ++K  +             
Sbjct: 230 TQKVNDI-------------------------------LLNLEKQGD------------- 245

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
            +++       ++ R  G ++    PRG
Sbjct: 246 -VVK-------IYHRWFGPETPSAQPRG 265


>gi|225860607|ref|YP_002742116.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|225727230|gb|ACO23081.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae Taiwan19F-14]
          Length = 264

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE+
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEF 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|24379909|ref|NP_721864.1| putative ABC transporter, glutamine binding protein [Streptococcus
           mutans UA159]
 gi|24377888|gb|AAN59170.1|AE014984_5 putative ABC transporter, glutamine binding protein [Streptococcus
           mutans UA159]
          Length = 270

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 21/278 (7%)

Query: 2   YKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKA- 52
            K F +S+  LI++  +             +  +  IK+ G LK G+   +  F    A 
Sbjct: 3   IKKFLISLAALIMIATSLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAE 62

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G ++D  R ++ +I      ++ +P+  + R   + + Q+D++      T  R+ 
Sbjct: 63  TGKYEGMEIDIARKIAKSIGVK---LELVPVTTQTREPLMDNGQVDLVIATYTITPERQA 119

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           S  +      Y+D  GF++ +   IS +S L G +I V  G TT++ L  Y K H++K++
Sbjct: 120 SYSI--SKPYYYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFN 177

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +      E+  +  + R DA++ D S L        +     +L    +      A  +
Sbjct: 178 YVQLGSFPELAISLYSKRIDAFSVDKSILTGYVSKQSK-----LLKSGFNTQEYGIATKK 232

Query: 233 GDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDT 268
            +T     V++         + E    + N+     D 
Sbjct: 233 SNTGLTKYVNYLLKKWTADKSLESIYNKHNLESAKPDK 270


>gi|46579165|ref|YP_009973.1| amino acid ABC transporter amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603261|ref|YP_967661.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|46448578|gb|AAS95232.1| amino acid ABC transporter, amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563490|gb|ABM29234.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311233003|gb|ADP85857.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 275

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 11/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++    ++F  S +       ++ K   ++ G+ T  +        G+W GFD
Sbjct: 1   MRLGKIIALAAAFLVFTGSAALAGPAYDNVMKDKKIRVGLMTDSIPGGFYNEKGEWGGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +  D  ++Q   +N K R   +Q  ++DI   N   T  R+    + F  
Sbjct: 61  YDIATEIAKRMGVDIERVQ---VNNKTRIAYVQQGRVDISVSNMTHTRERDK--SVDFSI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---MKYHPIVFE 177
             +FDGQ  +  K +   SV  + G  I    GTT+E+ +    K           I F+
Sbjct: 116 TYFFDGQKVLAKKGQF-KSVKDMVGKKIATMQGTTSEVNVKRALKEAGDPNPDQSVISFQ 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E   A +  R   ++ D S L     +   P +  ++ + +++ P   A+ Q D+  
Sbjct: 175 KESECFQALQMGRVAGWSTDASILVGY--SAKEPGKFELVGNFLAEEPYGIAMPQDDSAL 232

Query: 238 YNIVSWTHYAM 248
            + V+     M
Sbjct: 233 RDAVNAALQDM 243


>gi|294670245|ref|ZP_06735138.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315]
 gi|291307982|gb|EFE49225.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315]
          Length = 288

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 23/262 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD---------------IKKRGFLKCGINTGLVG 46
            K   +    +I L   + +  A                    IK++G ++ G+      
Sbjct: 5   KKFSTLLAGAVIALGLAACNGGADNQAASGGQPAAAGADTVAAIKEKGVIRIGVFGDKPP 64

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V ANG  +GFDV+  + ++  +   P KI+++   A  R   ++S ++D+L  N   
Sbjct: 65  FGYVDANGKNQGFDVEIAKEMAKDLLGSPDKIEFVLTEAANRVEYVRSGKVDVLLANFTQ 124

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R     + F         G +  K K I+ V+QL   ++ V  GTT +     +F  
Sbjct: 125 TPERAE--AVDFASPYMKVALGVVSPKGKPITDVAQLKDQTLLVNKGTTADA----FFTK 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           ++ +   + F++  E   A +  R  A   D + L+A     + P   V + +I     +
Sbjct: 179 NHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPDYEVAIGNIGPAESI 236

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           APA+ +GD    + V+    AM
Sbjct: 237 APAVKKGDKALLDWVNGEIAAM 258


>gi|289676732|ref|ZP_06497622.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae FF5]
          Length = 341

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D    +  AI  D    
Sbjct: 51  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMP 110

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 111 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNIER--QQQVDFSIGIFEVGTRLLSKKD 168

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 169 SSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 228

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P +  +     S       + +GD  +   V     A   + E+
Sbjct: 229 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATFKSGEI 288

Query: 255 G 255
            
Sbjct: 289 N 289


>gi|226198726|ref|ZP_03794290.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pakistan 9]
 gi|225929166|gb|EEH25189.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pakistan 9]
          Length = 359

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +            L  I+  G +  G+    V F+         G
Sbjct: 62  MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 121

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 122 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 179

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 180 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 239

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 240 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 299

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 300 PGFKQLADRVIARMQRSGEAE 320


>gi|126446655|ref|YP_001079383.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           NCTC 10247]
 gi|238561893|ref|ZP_04609795.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei GB8 horse 4]
 gi|251766795|ref|ZP_02264976.2| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei PRL-20]
 gi|254175972|ref|ZP_04882630.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           ATCC 10399]
 gi|254189571|ref|ZP_04896081.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254203467|ref|ZP_04909828.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei FMH]
 gi|254205346|ref|ZP_04911699.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei JHU]
 gi|254265422|ref|ZP_04956287.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1710a]
 gi|254356151|ref|ZP_04972428.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei 2002721280]
 gi|126239509|gb|ABO02621.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei NCTC 10247]
 gi|147745706|gb|EDK52785.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei FMH]
 gi|147754932|gb|EDK61996.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei JHU]
 gi|148025134|gb|EDK83303.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei 2002721280]
 gi|157937249|gb|EDO92919.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160697014|gb|EDP86984.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           ATCC 10399]
 gi|238523731|gb|EEP87168.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei GB8 horse 4]
 gi|243064693|gb|EES46879.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei PRL-20]
 gi|254216424|gb|EET05809.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1710a]
 gi|261826291|gb|ABM99036.2| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei NCTC 10229]
          Length = 359

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +      +     L  I+  G +  G+    V F+         G
Sbjct: 62  MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 121

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 122 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 179

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 180 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 239

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 240 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 299

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 300 PGFKQLADRVIARMQRSGEAE 320


>gi|330830266|ref|YP_004393218.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Aeromonas veronii B565]
 gi|328805402|gb|AEB50601.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Aeromonas veronii B565]
          Length = 266

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 16/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   +S L    +   + +    S L  + +RG L+ G + G   F      G + GF
Sbjct: 1   MIKKLILSTLLFCGIATAAPTPAPTSTLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++  +      ++++         AL + + D++      T  R  +L + F 
Sbjct: 61  DVDLAKMVAKEMGVK---VEFVNTAWDGIIPALLTNKFDVIMGGMTVTPQR--NLRVNFA 115

Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIV 175
                 GQ  ++ K+    I S + L+       V+ GTT E  +             + 
Sbjct: 116 DPYIVVGQTIVLRKEKAGEIKSFTDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQ 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE  ++        + DA+  D+         N     H  L    +  PLA AI +GD 
Sbjct: 172 FETQDDAKLEVINGKVDAFVYDLPYNAIFASQNQGAVVH--LDKPFTFEPLAWAIRKGDQ 229

Query: 236 EWYNIVSWTH 245
           +  N  +   
Sbjct: 230 DTLNWFNNYL 239


>gi|150020368|ref|YP_001305722.1| extracellular solute-binding protein [Thermosipho melanesiensis
           BI429]
 gi|149792889|gb|ABR30337.1| extracellular solute-binding protein, family 3 [Thermosipho
           melanesiensis BI429]
          Length = 247

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 20/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V +  +I+            L +IK+RG L  G       F  V  + +  GFD
Sbjct: 3   MRRWVAVFVFLIIVGVIF-----GGTLSEIKERGKLIIGTEPTFPPFEYVDKDNNIVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   ++ + L       A+ S +ID++      T  R     + F  
Sbjct: 58  IDIAKKIAEELGVE---LEIVNLPFDSLIPAIMSDKIDLIIAGMTITKERAKV--IDFSI 112

Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +   Q  ++ K +     S+++L G  + VQ GTT +L ++D  +          F++
Sbjct: 113 PYFNANQSIVVRKGESFSPKSLNELVGKRVAVQLGTTGDLVVSDIKR-----IKITRFQK 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D +   A      +     +   I +       + + +TE  
Sbjct: 168 FTDAFLELQNKRVDAVVLDEAVARAYVKKFPK---FEVSTVIDTGEKYGIGVKKENTELL 224

Query: 239 NIVSWTH 245
             V+   
Sbjct: 225 EFVNKVI 231


>gi|256377588|ref|YP_003101248.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255921891|gb|ACU37402.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 319

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 97/232 (41%), Gaps = 10/232 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
           L       + S +  I +RG L  G++             G+ +GFDVD  R ++ ++  
Sbjct: 67  LPAPGAMPSGSTMRRIAERGQLVVGVDQNTYLMGFRDPFTGELQGFDVDLAREVARSLLG 126

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DP+K+++  LN+ +R  AL++ ++D++ R    T  R     + F    Y  GQ  ++ K
Sbjct: 127 DPTKVRFRVLNSDQRLPALETGEVDVVVRTMTITCER--WRRVNFSTSYYEAGQRVLVPK 184

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             G++ ++ LSG  +C   G+++   +    +AH     P+      +     +  + DA
Sbjct: 185 DSGVTGLTALSGRKVCATTGSSSLAHV----RAHPSGPVPVAVPNWTDCLVMLQQGQVDA 240

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + D + L      +       ++   ++       + +G  +    V+   
Sbjct: 241 ISTDDTILAGFAAQDP---YTEVVGPRLTTESYGIGVAKGADDLTRFVNGVL 289


>gi|300313151|ref|YP_003777243.1| glutamate/aspartate ABC transporter periplasmic protein
           [Herbaspirillum seropedicae SmR1]
 gi|300075936|gb|ADJ65335.1| ABC-type glutamate/aspartate transport system, periplasmic
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 315

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 93/261 (35%), Gaps = 8/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M       +L    +  +S         L  IK  G L  G+    + F+ +     ++G
Sbjct: 1   MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +D C     A+   +      I+ +P+ +  R   + +   DI   +      R    
Sbjct: 61  YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQER--WN 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF    +     F+  K   + ++  L G ++   +GT+    +       N+  + +
Sbjct: 119 QVAFSVTEFVTANKFLSKKAANLKTLEDLKGKTVVSTSGTSNLKQITALNAERNLGMNIL 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   L +L   +  P ++ +  + +S  P    + +GD
Sbjct: 179 AAKDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPGDYQVSSEALSVEPYGLILPKGD 238

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E+  +V      +   +++ 
Sbjct: 239 KEFKTVVDDALTVVYKGDDIK 259


>gi|170288143|ref|YP_001738381.1| extracellular solute-binding protein [Thermotoga sp. RQ2]
 gi|170175646|gb|ACB08698.1| extracellular solute-binding protein family 3 [Thermotoga sp. RQ2]
          Length = 246

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L + I+ F+       ++ +IK RG+L  G++     F  V  +G+  GFD
Sbjct: 1   MKKLLVVLVLLVSIVIFS------GVINEIKSRGYLLVGLSADFPPFEFVDESGNIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  +   ++ + +       +L +K+ID++      T  R+  +   F  
Sbjct: 55  VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  GQ  ++ K       +   L G ++ VQ GTT ++ ++ Y          + F++
Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D       +    +  + VI   ++S      A+ + DT+  
Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221

Query: 239 NIVSWTH 245
             ++   
Sbjct: 222 EFINSVL 228


>gi|253687586|ref|YP_003016776.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251754164|gb|ACT12240.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 298

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L             A  L  +K  G +  G     V F+         G+ 
Sbjct: 3   MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
             +   +  A+         +++ LP+ ++ R   LQ+   D    +T   L R+     
Sbjct: 63  QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K  G+     L+G ++ V +GTT+E+ L    +   MK   I  
Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRIISA 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D + L   +       +  I+    S+      + + D +
Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKSADQWDIVGKAQSEEAYGCMLRKDDPQ 240

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   + T+ E  
Sbjct: 241 FKKLVDDTIAEVQTSGEAE 259


>gi|224371421|ref|YP_002605585.1| GltI [Desulfobacterium autotrophicum HRM2]
 gi|223694138|gb|ACN17421.1| GltI [Desulfobacterium autotrophicum HRM2]
          Length = 300

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K   V++     L            + + + ++L  I+K G +  G   G V F  + 
Sbjct: 1   MEKMMGVAVAAFYSLAILLGITGNMDHAVAGDENLLEKIEKSGEVHMGFREGSVPFGFID 60

Query: 52  ANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            NG W GF +D    +   +   F+ P K+   P+N K R   + +  + +   +T  TL
Sbjct: 61  KNGSWDGFGIDLGTEVVKDLEKKFNKPIKLVKHPMNPKTRITMVTNGMVAMGIGSTTITL 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            RE    + F    +  G   ++ K   ISS + + G  + + +G+T  +   D      
Sbjct: 121 AREEV--VDFSLPYFLTGTRLLVPKDSPISSFADIGGKRVGMGSGSTANIKGMDRAIEQG 178

Query: 169 ---MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                   ++FE   +   A +  + DAY  D S L  ++     P +  I+   ++  P
Sbjct: 179 LVKPACKKVLFEEHNKGFLALQQGKIDAYFTDASQLAGMRAKARNPQDWKIVGKYLTYEP 238

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMV 249
               + +G  EW + V+ +   M+
Sbjct: 239 YGFILPEGQGEWRDFVNASLIHMI 262


>gi|291280399|ref|YP_003497234.1| amino acid ABC transporter substrate-binding protein [Deferribacter
           desulfuricans SSM1]
 gi|290755101|dbj|BAI81478.1| amino acid ABC transporter, substrate-binding protein
           [Deferribacter desulfuricans SSM1]
          Length = 269

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 94/251 (37%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K F   ++ L    F   + N+    S L  I KRG L+ G+ +G   F     NG+ 
Sbjct: 1   MRKFFVSLLVFLFAATFLYAADNSLWEKSTLNQILKRGELRVGLESGYKPFEMTAKNGEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  + ++ A+      ++ +         AL + + DI+      T  R  +L +
Sbjct: 61  IGFDVDLAKVMAKAMGVK---LKIVNTAWDGIIPALITDKFDIIMSGMTITQKR--NLQV 115

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F       GQ  ++HKK    I S   L+     + +   T    A   K +  K    
Sbjct: 116 NFADPYIIVGQTLLIHKKDAGKIKSYKDLNNPKYVIASKLGTTGYFA--AKKYIPKAKVN 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            FE   +    +   + DA+  D+                  L    +  PL  AI +GD
Sbjct: 174 AFETEADAFQDFINGKADAFVYDLPLCAYYYSLYKDRVVF--LDKPFTFEPLGWAIKKGD 231

Query: 235 TEWYNIVSWTH 245
            ++ N ++   
Sbjct: 232 PDFLNWLNNFL 242


>gi|15891687|ref|NP_357359.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15160141|gb|AAK90144.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 297

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 8/257 (3%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M    F + + C   +     +     L  I K   ++ G       F+    NG+  GF
Sbjct: 1   MRLSVFCLFLTCFAPVTPLQAADEGDTLQQIAKTAKIRIGYREAEPPFSYQLPNGEITGF 60

Query: 60  DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D CRA+S      +  D  +++Y+      RF+ ++S QIDI    T     R     
Sbjct: 61  STDLCRAISEDIRSKLKLDKIELEYVKATPATRFILVRSGQIDIECAATTNNSERRKI-- 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +     F+  K+  + S++ L+G S+   +GT     L    +A N+    + 
Sbjct: 119 VDFSYPNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNRAKNLNISVMP 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGD 234
            +  EE      A +  A+  D   L AL  T++ P  + +  + +S   P      + D
Sbjct: 179 TKTNEEAFDLVVAGKASAFVMDGILLAALAATSENPDLYALSEETLSAPEPYGLVFRRND 238

Query: 235 TEWYNIVSWTHYAMVTA 251
             +   V+ +   M T+
Sbjct: 239 PAFKAAVNDSLRHMYTS 255


>gi|167748158|ref|ZP_02420285.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662]
 gi|167652150|gb|EDR96279.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662]
          Length = 289

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 19/257 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K       +++L + I   T         S N S +  IKK G +K G+ +    F  
Sbjct: 1   MKKFSRILVVLAVLSMAIGLMTGCGNKKSEKSDNQSSVEQIKKNGKIKVGVFSDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  NG  +G+DV     L+  +  D +K++++ + A  R   LQS ++D++  N   T  
Sbjct: 61  VDKNGKNQGYDVVLAHRLAKDLLGDENKVEFVLVEAASRVEFLQSNKVDVILANFTVTDE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + +         G +    K I+ V QL G  + V  GTT E      F     
Sbjct: 121 RKEV--VDYALPYMKVSLGVVSPNGKVITDVKQLKGKKLIVNKGTTAETY----FTQKYP 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + +++  E   A +  R  A   D + +YA     +       +  +     +APA
Sbjct: 175 DIELLKYDQNTEAFNALKDGRGAALAHDNTLVYAWA--RENKGFTTGIKSLGEHDFIAPA 232

Query: 230 IIQGDTEWYNIVSWTHY 246
           + +G+ +    +     
Sbjct: 233 VKKGNDDLKGWIDDEIT 249


>gi|42518509|ref|NP_964439.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           NCC 533]
 gi|41582794|gb|AAS08405.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           NCC 533]
          Length = 262

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 9/259 (3%)

Query: 1   MYKDFF---VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K      + I+ L  +         +    IK RG L  G++   V     + NG   
Sbjct: 1   MKKIIRFLGLLIIVLASVGVVGCQRQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+   I   P    +  ++   +   L++  ID++      T  R     +A
Sbjct: 61  GFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVA 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVF 176
           F      + Q  +  K +GI++  Q+ G  + VQ G++    L +Y K    +    +++
Sbjct: 116 FSKPYLENDQILVTRKNEGINNYRQMKGKILGVQTGSSGADDLDNYPKVLKKRVKSTVLY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +         +A R D    D          +    E             +  I + D  
Sbjct: 176 DTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDKT 235

Query: 237 WYNIVSWTHYAMVTAEELG 255
             N ++     +    EL 
Sbjct: 236 LKNKINQALDHLEKTGELK 254


>gi|264676197|ref|YP_003276103.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni CNB-2]
 gi|262206709|gb|ACY30807.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni CNB-2]
          Length = 238

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 88/239 (36%), Gaps = 7/239 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               ++LC  +      + +A  L  ++  G +        V F+ +  NG   G  V+ 
Sbjct: 2   QLHSTVLCAALGLGFLGAAHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEL 60

Query: 64  CRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            + ++ A+         ++++  + ++ R   L +  ID+   +T    +R   +G  F 
Sbjct: 61  SQTVAEAVKKQLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVG--FA 118

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              ++ G   ++ K  GI S + L G +  +  GTT    L           + ++ +  
Sbjct: 119 INHFYTGTRLLVKKSSGIQSYADLKGKTAAITTGTTNLQVLRKANAEQGWGMNIVMAKDH 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +        R  A+  D   LY L      P +  ++ D +   P A  +    + W 
Sbjct: 179 ADGFLLVENDRAAAFGMDDILLYGLIANAKNPRDFHVVADALQVEPYACMLRSSSSWWM 237


>gi|49475801|ref|YP_033842.1| amino-acid ABC transporter binding protein [Bartonella henselae
           str. Houston-1]
 gi|49238608|emb|CAF27849.1| Amino-acid ABC transporter binding protein [Bartonella henselae
           str. Houston-1]
          Length = 303

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 8/254 (3%)

Query: 1   MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   + I     +             L  IKK G +  G+     G      NG + G
Sbjct: 1   MRKSLLIFIAATTTIIGLIGIAKAENDTLEKIKKTGEVTLGVRESS-GLGYALGNGKYVG 59

Query: 59  FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           F  +    +   I      P KI YLP+ ++ R   LQ+   D    +T   + R     
Sbjct: 60  FHTEMAEHIIDDISKKIGKPIKIHYLPITSQNRIPLLQNNTYDFECGSTTNDIFRSKEAA 119

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F   TY +     + K   I S+  L+G +I    GTT    +    +A N+ +  + 
Sbjct: 120 --FAYTTYVEEVRIAVKKNSNIKSLEDLNGKTIATTTGTTAVQLIRKNKRAKNINFKVVK 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R DA+  D S L      +  PS++VIL  ++S  P+A  +   D 
Sbjct: 178 GKDHGDSFLLLESGRADAFIMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLNDQ 237

Query: 236 EWYNIVSWTHYAMV 249
              + ++ +    +
Sbjct: 238 NLEHAINESIVHQI 251


>gi|308186031|ref|YP_003930162.1| glutamate/aspartate transport system, periplasmic-binding protein
           precursor [Pantoea vagans C9-1]
 gi|308056541|gb|ADO08713.1| Glutamate/aspartate transport system, periplasmic-binding protein
           precursor [Pantoea vagans C9-1]
          Length = 298

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 83/248 (33%), Gaps = 6/248 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K     +L             +  L  I   G +  G     V F+         G+  
Sbjct: 4   RKVALSLLLISAAAGAAQAEDLSGTLKKINDNGVIVVGHRESSVPFSYYDNQQKVVGYSQ 63

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +  A+  AI         +++ +P+ ++ R   LQ+   D    +T   L R+      
Sbjct: 64  AYSNAIVEAIKAKLNKPDLQVKMIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA-- 121

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   ++ K   I   + L G ++ V +GTT+E+ L        +    I  +
Sbjct: 122 FSDTIFVIGTRLLVKKDGPIKDFADLKGKTVVVTSGTTSEVLLHKLNDEQKLDMRIISAK 181

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +        R  A+  D + L   +    +P    IL    SK      + + D ++
Sbjct: 182 DHGDSFRTLETGRAVAFMMDDALLAGERAKAKKPDNWEILGTPQSKEAYGCMLRKDDPQF 241

Query: 238 YNIVSWTH 245
             +V  T 
Sbjct: 242 KALVDETI 249


>gi|51245088|ref|YP_064972.1| glutamine ABC transporter, periplasmic substrate binding protein
           [Desulfotalea psychrophila LSv54]
 gi|50876125|emb|CAG35965.1| probable glutamine ABC transporter, periplasmic substrate binding
           protein [Desulfotalea psychrophila LSv54]
          Length = 271

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 9/248 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   + ++     +    +   I+K   L+ GI    +  A      +W GFD
Sbjct: 1   MRLKSIIAGAVISVMVSGVVAFAGPVWDKIQKSKTLRAGIMNNSIPGAYYNDKKEWVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +     ++    +  K R   LQ  +ID+   N   T  RE    + F  
Sbjct: 61  VDMAKEIAKRLGLKLEQVL---VTDKTRIGFLQQGRIDMSIANM--THKRERDKSIDFSI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +FDGQ  +  K    +  + L G +I    GTT+E+ +    K        + ++   
Sbjct: 116 TYFFDGQKMLTRKG-KYADWNALVGKTIATVQGTTSEINVKTLMKKMG-GAEIVSYQDYP 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A +  R  A++ D + L         P ++ ++ D  S+ P    + Q +++  + 
Sbjct: 174 SAFNALQMGRVQAFSTDSTILLGYAAQ--EPGKYELVGDFFSREPYGIGLPQDESQLRDA 231

Query: 241 VSWTHYAM 248
           V++    M
Sbjct: 232 VNFALQDM 239


>gi|27375213|ref|NP_766742.1| glutamate/aspartate periplasmic binding protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27348349|dbj|BAC45367.1| glutamate/aspartate periplasmic binding protein precursor
           [Bradyrhizobium japonicum USDA 110]
          Length = 308

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               S+L    L  T     +  L  IKK   ++ G       F+ +  +G   G+ ++ 
Sbjct: 15  WLAASLLATTALAQTGSEGLSPTLSAIKKAHVVRLGYRESSPPFSFLDQSGRPIGYSLEL 74

Query: 64  CRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C A+   I  +       I Y+ + + +R  A+   +ID+   +T     R   +   F 
Sbjct: 75  CEAIVEEIGVEVDDPNLKIDYVKVTSDDRIDAVLQNKIDLECGSTTANAERAKRVA--FS 132

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P+ +  G   ++ K   + S++ L G +I V  GTT E  +    K  ++     V    
Sbjct: 133 PLMFVAGTKLMVPKASSVQSLTDLKGKTIVVTKGTTNEQAIQAADKKSSLGLTIAVGADH 192

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+        + DA+  D   L  L   +    ++ +  D +S  P      +G+ +   
Sbjct: 193 EQSFQMLADGKADAFATDDILLSGLIARHKAQDKYRVTGDYLSYDPYGIMFRKGEPQLSA 252

Query: 240 IVSWT 244
           +V  T
Sbjct: 253 VVERT 257


>gi|49474411|ref|YP_032453.1| amino-acid ABC transporter binding protein [Bartonella quintana
           str. Toulouse]
 gi|49239915|emb|CAF26313.1| Amino-acid ABC transporter binding protein [Bartonella quintana
           str. Toulouse]
          Length = 303

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 8/260 (3%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    F ++   ++            L  IKK G +  G+     G A    NG + G
Sbjct: 1   MKKSLSIFTAVTVTVMGLIGIAKAENDTLEKIKKTGEITLGVRESS-GLAYALGNGKYVG 59

Query: 59  FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           F  +    +   I      P KI YLP+ ++ R   L++   D    +T   +    S  
Sbjct: 60  FHTEMAERIIDDISKKIGKPVKIHYLPITSQNRIPLLKNSTYDFECGSTTNDVS--SSKE 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            AF   TY +     + K   I S   L+G ++    GTT+   +    ++ N+ ++ + 
Sbjct: 118 AAFAYTTYVEDVRIAVKKNSNIKSFDDLNGKTVATTTGTTSVQIIRKNQRSKNINFNVVK 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +      + R DA+  D S L      +  PS+++IL  ++S  P+A  +   D 
Sbjct: 178 GKDHGDSFLLLESGRADAFIMDASILAGHIAKSKNPSDYIILDTVLSVEPIACMLRLNDK 237

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++ +    +  E L 
Sbjct: 238 NLKQAINDSIVRQIKDESLK 257


>gi|194397781|ref|YP_002037268.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae
           G54]
 gi|194357448|gb|ACF55896.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae G54]
          Length = 264

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|157145937|ref|YP_001453256.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895]
 gi|157083142|gb|ABV12820.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895]
          Length = 277

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 11/244 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61
           K   +++  L      +    A  L DIK  G +K         F  V        G+DV
Sbjct: 10  KKTLLALSALFASGIAALPAQADQLADIKAAGVVKVATFDANPPFGSVDPQTHKIVGYDV 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF  AL+ ++      ++ +  N   R   LQS + D++  +   T  R  +  + F   
Sbjct: 70  DFAEALAKSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSVP 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  GQ F++        + + S A I    GTT E  L   F     +   + ++ +  
Sbjct: 125 YFITGQQFLVPATSP-DKLDEYSRARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R     A T D + L  L       +   ILPD++SK  +   + +G+      V
Sbjct: 180 ALTALRNGNVQAITQDSTILAGLLSGAPDKANFKILPDLLSKEEIGVGVKKGEPALLKAV 239

Query: 242 SWTH 245
           +   
Sbjct: 240 NDEL 243


>gi|319793095|ref|YP_004154735.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315595558|gb|ADU36624.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 299

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 12/259 (4%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M     +  ++   +++F  S +  A  L  +K  G +  G+  G    +     G + G
Sbjct: 1   MKTQSLLNAAVASALVVFCASAAAEADTLKKLKDTGVITMGVRDGSGAISFTTGPGKYTG 60

Query: 59  FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           F V+ C  + + I      D  +++Y  +  + R   +Q+  +DI    T     R+  +
Sbjct: 61  FHVEICERVIADIKKSAQLDKLEVRYQLVTPQNRIPLVQNGTVDIECGTTTNNAARQKEV 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F P  Y +G    +     I S +QL+G +    +G+T+   L    +        +
Sbjct: 121 A--FAPTLYVEGVRIAVKANSPIKSTTQLAGKTAAATSGSTSVQLL----RKLKSDATEL 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           + +   E        R DA+  D   L  L   +  P+++ +L  I+S  P+A  + +GD
Sbjct: 175 MAKDNSEGFLLLETGRADAFVADGQILATLISKSKEPAQYRLLDQILSTEPIAIMLPKGD 234

Query: 235 TEWYNIVSWTHYAMVTAEE 253
           + +   V  +  AM  + E
Sbjct: 235 SAFKKAVDQSIEAMARSGE 253


>gi|221214829|ref|ZP_03587798.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           multivorans CGD1]
 gi|221165368|gb|EED97845.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           multivorans CGD1]
          Length = 301

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79
           +  L  I++   +  G     V F+ V A+G   GF  D C  + +A+         +++
Sbjct: 29  SGTLEKIRQTNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++P+ ++ R   +Q+  +D+    T     R   +   F    +      +   + GI  
Sbjct: 89  FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTQSGIRD 146

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G ++    GTT+E  L    +   M    I  +   E      + R  AY  D  
Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 206

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L  ++    +P++  I+    S       + + D ++  +V      ++   E+ 
Sbjct: 207 LLAGVRQLAAKPADWRIVGTPQSSEAYGFMLRKDDPQFKALVDSVLVQLMKRGEID 262


>gi|254195402|ref|ZP_04901830.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei S13]
 gi|254299631|ref|ZP_04967080.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 406e]
 gi|157809634|gb|EDO86804.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 406e]
 gi|169652149|gb|EDS84842.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei S13]
          Length = 298

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +            L  I+  G +  G+    V F+         G
Sbjct: 1   MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 61  YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 119 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 179 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 239 PGFKQLADRVIARMQRSGEAE 259


>gi|53715943|ref|YP_106460.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           ATCC 23344]
 gi|121597649|ref|YP_990548.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           SAVP1]
 gi|52421913|gb|AAU45483.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           ATCC 23344]
 gi|121225447|gb|ABM48978.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           SAVP1]
          Length = 298

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +      +     L  I+  G +  G+    V F+         G
Sbjct: 1   MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 61  YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 119 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 179 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 239 PGFKQLADRVIARMQRSGEAE 259


>gi|222109804|ref|YP_002552068.1| family 3 extracellular solute-binding protein [Acidovorax ebreus
           TPSY]
 gi|221729248|gb|ACM32068.1| extracellular solute-binding protein family 3 [Acidovorax ebreus
           TPSY]
          Length = 299

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 104/254 (40%), Gaps = 8/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + + ++    ++F+     L  IK  G +  G+     G      NG + GF 
Sbjct: 1   MKKHLLAAAITVLA-AGSAFAQANDTLAKIKSTGAVTLGVRESS-GLGYTLGNGKYVGFH 58

Query: 61  VDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    + +     +     +I+Y P+ ++ R   + +  +DI   +T     R+  +  
Sbjct: 59  TEMGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVA- 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +     ++ K GI+ +  L+G +I    GTT+  TL    +A  + +  ++ 
Sbjct: 118 -FAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D S L A    +  P++  I+ +++S  P+A  + + D  
Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPA 236

Query: 237 WYNIVSWTHYAMVT 250
           +   V  +    + 
Sbjct: 237 FKKAVDDSIKRQIA 250


>gi|299067960|emb|CBJ39174.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum CMR15]
          Length = 298

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 108/309 (34%), Gaps = 25/309 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      ++L  I +  ++         L  IK  G +  G+    + F+         G
Sbjct: 1   MNLAKLATVLAAIGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D       A+   +     +++ +P+ ++ R   LQ+  IDI   +T   L R+   
Sbjct: 61  YSYDVATKVVEAVKEQLKLKDLQVKEIPVTSQNRITLLQNGTIDIECGSTTNNLERQK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + I
Sbjct: 119 QASFTNTIFIIGTRMMVKKDAGIKDWTDLKGKNVVTTAGTTSERLLRKMNDEKQLGMNII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + LY  +     P++ +++    S+      + + D
Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKARTPADWIVVGKPQSREAYGCMVRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTK 293
             +  +   T                +  +   + N + +++         +     L+ 
Sbjct: 239 APFKTLADKTI---------------VGMMKDGSINAEYKKWFEQPVPPKGLNLEFPLSD 283

Query: 294 DWTYRIIRH 302
           D    +I+ 
Sbjct: 284 D-MKALIKS 291


>gi|226362770|ref|YP_002780548.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226241255|dbj|BAH51603.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 325

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 10/226 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +   S L  I+ RG L  G +     F+      G   GFD+D  R ++  +F DPSK++
Sbjct: 76  APPGSALAAIRARGRLIVGTDQNTNLFSFRDPKTGTLSGFDIDLAREIARDLFGDPSKVE 135

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +  L +  RF AL+   +D++   T  T  R   +G  F  + +   Q  ++ +  GISS
Sbjct: 136 FRLLTSAGRFDALERNDVDLVVHATSITCERAARVG--FSSVYFEAFQRLLVPEGSGISS 193

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L+G  +C    TT+  T+             +     ++     +  + DA T D S
Sbjct: 194 PTDLAGKRVCTFIDTTSLATIQRVSPEA----TIVAVPDWDDCLTTLQLGQADAATTDNS 249

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L  L   +       I+   +   P      + +      V+ T 
Sbjct: 250 ILAGLAAQDPN---LEIVGPNLELEPYGVVANKNNDALVRFVNGTL 292


>gi|107022690|ref|YP_621017.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116689639|ref|YP_835262.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|170732941|ref|YP_001764888.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|254245482|ref|ZP_04938803.1| Extracellular solute-binding protein, family 13 [Burkholderia
           cenocepacia PC184]
 gi|105892879|gb|ABF76044.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647728|gb|ABK08369.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124870258|gb|EAY61974.1| Extracellular solute-binding protein, family 13 [Burkholderia
           cenocepacia PC184]
 gi|169816183|gb|ACA90766.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 271

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M  +   + L  + L       +A  L DIKK G L+         F  V A      G 
Sbjct: 1   MKINTLATWLVGVALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  +    GTT E+TL + F         + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 231 FVNDTLKGL 239


>gi|290580111|ref|YP_003484503.1| putative ABC transporter glutamine binding protein [Streptococcus
           mutans NN2025]
 gi|254997010|dbj|BAH87611.1| putative ABC transporter glutamine binding protein [Streptococcus
           mutans NN2025]
          Length = 270

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 21/278 (7%)

Query: 2   YKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKA- 52
            K F +S+  LI++                +  +  IK+ G LK G+   +  F    A 
Sbjct: 3   IKKFLISLAALIMIATGLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAE 62

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G ++D  R ++ +I      ++ +P+  + R   + + Q+D++      T  R+ 
Sbjct: 63  TGKYEGMEIDIARKIAKSIGVK---LELVPVTTQTREPLMDNGQVDLVIATYTITPERQA 119

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           S  +      Y+D  GF++ +   IS +S L G +I V  G TT++ L  Y K H++K++
Sbjct: 120 SYSI--SKPYYYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFN 177

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +      E+  +  + R DA++ D S L        +     +L    +      A  +
Sbjct: 178 YVQLGSFPELAISLYSKRIDAFSVDKSILTGYVSKQSK-----LLKYGFNTQEYGIATKK 232

Query: 233 GDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDT 268
            +T     V++         + E    + N+     D 
Sbjct: 233 SNTGLTKYVNYLLKKWTADKSLESIYNKHNLESAKPDK 270


>gi|315635238|ref|ZP_07890515.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Aggregatibacter segnis ATCC 33393]
 gi|315475984|gb|EFU66739.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Aggregatibacter segnis ATCC 33393]
          Length = 285

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 8/222 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I+K G ++ G+ +    F  V A G  +GFDV+  +A+   +  D +K++++ ++
Sbjct: 38  SSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVD 97

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A  R   L SK++DI+  N   T  R+    + F         G +      I+ + QL 
Sbjct: 98  AANRAEYLLSKKVDIILANFTVTPARKEV--VDFANPYMKVALGVVSKDGSVITDLEQLK 155

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++ V  GTT ++    +F  +      + FE+  E   A R  R DA + D + L+A 
Sbjct: 156 GKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAW 211

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 P   V + +   +  +APA+ +   E  N ++    
Sbjct: 212 AKQ--NPGYTVGVKNFGDQDVIAPAVRKDAPELLNWLNNEIQ 251


>gi|69246349|ref|ZP_00603905.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium DO]
 gi|257878163|ref|ZP_05657816.1| extracellular solute-binding protein [Enterococcus faecium
           1,230,933]
 gi|257881053|ref|ZP_05660706.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,502]
 gi|257884714|ref|ZP_05664367.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,501]
 gi|257889638|ref|ZP_05669291.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,410]
 gi|258616331|ref|ZP_05714101.1| glutamine ABC transporter, substrate binding protein [Enterococcus
           faecium DO]
 gi|260559210|ref|ZP_05831396.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           C68]
 gi|261207743|ref|ZP_05922428.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           TC 6]
 gi|289565818|ref|ZP_06446260.1| ABC transporter glutamine-binding protein glnH [Enterococcus
           faecium D344SRF]
 gi|293554036|ref|ZP_06674636.1| glutamine-binding protein [Enterococcus faecium E1039]
 gi|293563130|ref|ZP_06677595.1| glutamine-binding protein [Enterococcus faecium E1162]
 gi|293569785|ref|ZP_06680872.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071]
 gi|294619641|ref|ZP_06699063.1| glutamine-binding protein [Enterococcus faecium E1679]
 gi|294623308|ref|ZP_06702170.1| glutamine-binding protein [Enterococcus faecium U0317]
 gi|314939889|ref|ZP_07847095.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133a04]
 gi|314943736|ref|ZP_07850475.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133C]
 gi|314949692|ref|ZP_07853010.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0082]
 gi|314953238|ref|ZP_07856177.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133A]
 gi|314993682|ref|ZP_07859030.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133B]
 gi|314997401|ref|ZP_07862352.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133a01]
 gi|68195302|gb|EAN09753.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium DO]
 gi|257812391|gb|EEV41149.1| extracellular solute-binding protein [Enterococcus faecium
           1,230,933]
 gi|257816711|gb|EEV44039.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,502]
 gi|257820552|gb|EEV47700.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,501]
 gi|257825998|gb|EEV52624.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,410]
 gi|260074967|gb|EEW63283.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           C68]
 gi|260078126|gb|EEW65832.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           TC 6]
 gi|289162361|gb|EFD10219.1| ABC transporter glutamine-binding protein glnH [Enterococcus
           faecium D344SRF]
 gi|291587533|gb|EFF19410.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071]
 gi|291594115|gb|EFF25567.1| glutamine-binding protein [Enterococcus faecium E1679]
 gi|291597276|gb|EFF28465.1| glutamine-binding protein [Enterococcus faecium U0317]
 gi|291601818|gb|EFF32070.1| glutamine-binding protein [Enterococcus faecium E1039]
 gi|291604908|gb|EFF34377.1| glutamine-binding protein [Enterococcus faecium E1162]
 gi|313588536|gb|EFR67381.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133a01]
 gi|313591856|gb|EFR70701.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133B]
 gi|313594704|gb|EFR73549.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133A]
 gi|313597599|gb|EFR76444.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133C]
 gi|313640852|gb|EFS05432.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0133a04]
 gi|313643950|gb|EFS08530.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecium TX0082]
          Length = 271

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 97/250 (38%), Gaps = 15/250 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56
            K   + +L +  L           N  IL   K    +  G+      F  +   +   
Sbjct: 5   KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDVD  +A++  I  D  K +++ + +K R   L++  ID +      T  R+    +
Sbjct: 65  QGFDVDIAKAITKKILGDNGKTEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175
            F  + +  GQ  ++ K   I SV  L+ ++      G+T+   +  +          + 
Sbjct: 123 DFSDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAP----DAKILE 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E   E   A ++ + DA T D + L  +   ++ P E+ ++    +  P   AI +G  
Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235

Query: 236 EWYNIVSWTH 245
            +   V+   
Sbjct: 236 NFLKAVNQAL 245


>gi|48428787|gb|AAT42435.1| ABC-type amino acid transport, periplasmic component [Collimonas
           fungivorans Ter331]
          Length = 277

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 98/254 (38%), Gaps = 7/254 (2%)

Query: 7   VSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           + ++  I L   + + +A  +L  I+    +  G       F+ V  +    G+ +D C 
Sbjct: 22  LGMVLAITLGVAATAVHAEDVLTKIRDSKTITIGYREASFPFSFVDQDKKPVGYAIDLCL 81

Query: 66  ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            ++ A+          I Y+P+ +  R   + S +ID+   +T     R     ++F   
Sbjct: 82  KIADAVKQQLKLPQLNIVYVPVTSSNRIDMIASGKIDLECGSTTNNAERRK--QVSFTIA 139

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +      ++  +  I +   L    +    GTT+  +L D  +  ++    +      E
Sbjct: 140 HFMASSRMLVRVEDKIKNWPDLRDKKVATTKGTTSVKSLVDRGQVRSLNMTIVEGRDHNE 199

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                     DA+  D   LY LK T   P+ + I+ + ++  P A  + +GDT +  +V
Sbjct: 200 SFKMVEDKAADAFVMDDVLLYGLKATAKDPAAYAIVGEPLTTEPYAIMLPKGDTSYKAVV 259

Query: 242 SWTHYAMVTAEELG 255
                 ++   E+ 
Sbjct: 260 DREMGRIIHDGEIN 273


>gi|34496730|ref|NP_900945.1| ABC transporter periplasmic-binding protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34102585|gb|AAQ58950.1| probable ABC transporter, periplasmic-binding protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 283

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 110/325 (33%), Gaps = 67/325 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M K    +I   + +  TS +  A  L DIKK G L+         F  + A      G 
Sbjct: 17  MKK----TIALALAVALTSTAALADRLDDIKKAGVLRVAAFDSNPPFGFLDAKTRQISGL 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++  +      I     N   R   L S + DI++ N   T  R+    + F 
Sbjct: 73  DVDVAQHIAKKLGVKLQLIP---TNPANRVPLLVSGKADIVAANFTVTDERKK--QVDFS 127

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   +    QL+G  + V  GTT E+ L + +         + ++  
Sbjct: 128 LPYFASGQQFIVRKG-ALQKPEQLAGLRVGVDKGTTQEVYLREKYPK----TTVVAYDDT 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R     A T D S L AL       +++ + P  +++   A  + +G+     
Sbjct: 183 PLAFTALRNGNVQAITQDGSKLAALLANAPDKAKYELAPFTLTREFQAIGLPKGEARLTK 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V+ T        EL  +                                          
Sbjct: 243 VVNETLR------ELEKSGDAAR------------------------------------- 259

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324
                    ++DR  G +++  +PR
Sbjct: 260 ---------IYDRWFGPKTKAPLPR 275


>gi|126444823|ref|YP_001061310.1| solute-binding family 1 protein [Burkholderia pseudomallei 668]
 gi|126456775|ref|YP_001074257.1| solute-binding family 1 protein [Burkholderia pseudomallei 1106a]
 gi|167722081|ref|ZP_02405317.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei DM98]
 gi|167826650|ref|ZP_02458121.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 9]
 gi|167908550|ref|ZP_02495755.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|237509822|ref|ZP_04522537.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei MSHR346]
 gi|242313678|ref|ZP_04812695.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1106b]
 gi|254182839|ref|ZP_04889432.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1655]
 gi|126224314|gb|ABN87819.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 668]
 gi|126230543|gb|ABN93956.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1106a]
 gi|184213373|gb|EDU10416.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1655]
 gi|235002027|gb|EEP51451.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei MSHR346]
 gi|242136917|gb|EES23320.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1106b]
          Length = 299

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +            L  I+  G +  G+    V F+         G
Sbjct: 2   MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|53721189|ref|YP_110174.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei K96243]
 gi|76819782|ref|YP_336826.1| glutamate/aspartate periplasmic binding protein [Burkholderia
           pseudomallei 1710b]
 gi|124381383|ref|YP_001025039.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           NCTC 10229]
 gi|167818262|ref|ZP_02449942.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 91]
 gi|167848169|ref|ZP_02473677.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei B7210]
 gi|167896727|ref|ZP_02484129.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 7894]
 gi|167913410|ref|ZP_02500501.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 112]
 gi|52211603|emb|CAH37598.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei K96243]
 gi|76584255|gb|ABA53729.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei 1710b]
          Length = 299

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +      +     L  I+  G +  G+    V F+         G
Sbjct: 2   MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|325062714|gb|ADY66404.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 297

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 95/251 (37%), Gaps = 8/251 (3%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M    F + + C I       +     L  I K   ++ G       F+    +G+  GF
Sbjct: 1   MRISVFCLFLTCFIPTAPVQAAGEGDTLRQIAKTAKIRIGYREAEPPFSYQLPDGEVTGF 60

Query: 60  DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D CRA+S      +  D   I+Y+      RF+ ++S +IDI    T     R     
Sbjct: 61  STDLCRAISEDIRTQLKLDKLDIEYVKATPATRFILVRSGKIDIECAATTNNSERRKM-- 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +     F+  K+  + S++ L+G S+   +GT     L    +  N+    + 
Sbjct: 119 VDFSYPNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNREKNLNISVMP 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGD 234
            +  EE      A +  A+  D   L AL  T++ P  + +  + +S   P      + D
Sbjct: 179 TKTNEEAFELVVAGKASAFVMDGILLAALAATSENPDLYALSDETLSAPEPYGLVFRRND 238

Query: 235 TEWYNIVSWTH 245
             +   V+ + 
Sbjct: 239 PAFKAAVNESL 249


>gi|123443206|ref|YP_001007180.1| glutamate and aspartate transporter subunit [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090167|emb|CAL13030.1| putative amino acid-binding protein precursor [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 304

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 9/251 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77
            +   L  IK  G +  G     V F+         G+  D+   +  AI         +
Sbjct: 30  ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ ++ R   LQ+   D    +T   L R      AF    +  G   +  K   +
Sbjct: 90  VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                L+G  + V +GTT+E+ L    +   M    I  +   +      + R  A+  D
Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            + L   +    +P +  I+    S+      + + D  +  ++  T     TA+  G+ 
Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKTLLDETI---ATAQTSGVA 264

Query: 258 QKNINQVSKDT 268
           +K+ ++  K+ 
Sbjct: 265 EKSFDRWFKNP 275


>gi|146337810|ref|YP_001202858.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
           ORS278]
 gi|146190616|emb|CAL74618.1| Putative ABC transporter (substrate binding protein)
           [Bradyrhizobium sp. ORS278]
          Length = 308

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 94/259 (36%), Gaps = 17/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAE 49
           M     V+ L +  L   + +                L  IK R  +  G       F+ 
Sbjct: 1   MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSF 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTD 105
           +   G   G+ ++ C A+   I  +       I Y+ + + +R  A+ + +ID+   +T 
Sbjct: 61  LDQAGRPIGYSLELCEAIVEEIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTT 120

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
               R     ++F P+ +  G   ++ K   ++S + L G S+ V  GTT E  + +  +
Sbjct: 121 ANAERSR--QVSFSPLIFVAGTKLMVSKGSPVASATDLRGKSVVVTKGTTNEAAMREVDR 178

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
              +    +     E+        + DA+  D   L  L   +    +  I+ D +S  P
Sbjct: 179 KSALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDP 238

Query: 226 LAPAIIQGDTEWYNIVSWT 244
                 + + +   +V   
Sbjct: 239 YGIMFRKDEPQLAAVVERA 257


>gi|253701872|ref|YP_003023061.1| extracellular solute-binding protein family 3 [Geobacter sp. M21]
 gi|251776722|gb|ACT19303.1| extracellular solute-binding protein family 3 [Geobacter sp. M21]
          Length = 264

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 82/246 (33%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L++    S          +KK G L  G++            G+  GFD
Sbjct: 1   MKKILAILSSLLVLTLAVSAFAADGSFKRVKKEGTLTIGLDDAFPPMGYRNDKGELIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     KI++ P        AL SK+ D +      T  R+  +   F  
Sbjct: 61  IDAAEEVGKRLG---IKIKWQPTAWDGVMHALNSKKFDCIWNGMTITDERKKEVA--FTK 115

Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               D     +   +K    ++ L GA + VQ G++    +        +      +E  
Sbjct: 116 PYKMDGQVAVVRFGEKKFKKLADLKGARVGVQKGSSAVEAVKKLPA---VPAGVREYEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R D    D +          RP +  I+P  I+K P   A  + D E   
Sbjct: 173 PKALLDLESKRLDTVVIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKEDVELRE 230

Query: 240 IVSWTH 245
            V  T 
Sbjct: 231 AVQKTL 236


>gi|167564787|ref|ZP_02357703.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           oklahomensis EO147]
 gi|167571954|ref|ZP_02364828.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           oklahomensis C6786]
          Length = 299

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 89/261 (34%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +         +  L  I+  G +  G+    V F+         G
Sbjct: 2   MKPLRPLLSIAIGCALAAAAHADDASPTLKKIRDTGIVTLGVRESSVPFSYYDQQQRTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +   I  +       ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQDIALKIVDEIKKELKRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSFFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSETYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 AGFKQLADRVIAQMQRSGEAE 260


>gi|332160868|ref|YP_004297445.1| glutamate and aspartate transporter subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665098|gb|ADZ41742.1| glutamate and aspartate transporter subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863400|emb|CBX73522.1| glutamate/aspartate periplasmic-binding protein [Yersinia
           enterocolitica W22703]
          Length = 304

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 9/251 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77
            +   L  IK  G +  G     V F+         G+  D+   +  AI         +
Sbjct: 30  ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ ++ R   LQ+   D    +T   L R      AF    +  G   +  K   +
Sbjct: 90  VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                L+G  + V +GTT+E+ L    +   M    I  +   +      + R  A+  D
Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            + L   +    +P +  I+    S+      + + D  +  ++  T     TA+  G+ 
Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDETI---ATAQTSGVA 264

Query: 258 QKNINQVSKDT 268
           +K+ ++  K+ 
Sbjct: 265 EKSFDRWFKNP 275


>gi|167921349|ref|ZP_02508440.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei BCC215]
          Length = 299

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +            L  I+  G +  G+    V F+         G
Sbjct: 2   MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|149204302|ref|ZP_01881269.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseovarius sp. TM1035]
 gi|149142187|gb|EDM30234.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseovarius sp. TM1035]
          Length = 291

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 7/258 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +           L   +         L  I   G +  G     V F+ +      +G+ 
Sbjct: 7   RRVLAVAALTTGLAPAALWAQDLTGTLAKINDSGEIVIGHRESSVPFSYLNDQQQPEGYS 66

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           +D C  +   +        +++Y+P+N K R   + +  ID+   +T   L R     + 
Sbjct: 67  IDLCMKVVEEVEKTLGKDIEVRYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QQQVE 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           + P+T+  G   +  K  GISSV+ L G SI +  GTT E  +    +A  ++   +   
Sbjct: 125 YLPVTFVTGTKILTRKDSGISSVADLDGKSIALAQGTTNERAVKAAVEAQGLEVKILPVR 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   +    R DAY+ D   L+ L   +  P E  ++ D +S  P A  + + D+ +
Sbjct: 185 DHAEGMLSLETDRVDAYSTDHILLFGLIAKSKTPDEFAVVGDFLSFDPYALMVRRDDSAF 244

Query: 238 YNIVSWTHYAMVTAEELG 255
             +       +  + E+ 
Sbjct: 245 ELVGKTALANVFRSGEIN 262


>gi|300692512|ref|YP_003753507.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum PSI07]
 gi|299079572|emb|CBJ52250.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Ralstonia solanacearum PSI07]
          Length = 298

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 108/309 (34%), Gaps = 25/309 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      ++L  + +  ++         L  IK  G +  G+    + F+         G
Sbjct: 1   MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60

Query: 59  FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +  A+ D       +++ +P+ ++ R   LQ+  ID+   +T   L R+   
Sbjct: 61  YSYDIATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + I
Sbjct: 119 QASFTNTIFIIGTRMMVRKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D + LY  +      ++ +++    S+      + + D
Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKTTADWIVVGKPQSREAYGCMVRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTK 293
             +  +   T   M               +   + N + +++         +     L+ 
Sbjct: 239 APFKTLADKTITGM---------------MKDGSINAEYKKWFEQPVPPKGLNLDFPLSD 283

Query: 294 DWTYRIIRH 302
           D    +I+ 
Sbjct: 284 D-MKALIKS 291


>gi|302391066|ref|YP_003826886.1| extracellular solute-binding protein family 3 [Acetohalobium
           arabaticum DSM 5501]
 gi|302203143|gb|ADL11821.1| extracellular solute-binding protein family 3 [Acetohalobium
           arabaticum DSM 5501]
          Length = 258

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 93/252 (36%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K   + ++ L+ L         + +   +   +IK+ G L  G +     F      G
Sbjct: 1   MSKRIKLFLVTLLGLALVVGVVGCTGTEEKTTFNEIKEEGKLVVGCSADYKPFEYPNEEG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFDV+   A+   +     ++++          +L+SK+ D++      T  R    
Sbjct: 61  EIVGFDVELMEAVGEELG---LEVEFKDTAFDGLIPSLKSKKFDVIVSAMTITDKRAE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F    +  GQ   + +    I     L+G  + VQ GTT +L  ++           
Sbjct: 116 AVDFSEPYFNAGQVIAVKEGSTDIQGPEDLAGKVVGVQLGTTGDLEASEMEDIK----QV 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E++ +     R  R DA   D+    A  +  D P +  I+    ++     A+   
Sbjct: 172 KRYEKITQAFIELRNGRIDAVVNDLPVTAAYIM--DNP-DVEIIGKPFTEENYGIAMRPK 228

Query: 234 DTEWYNIVSWTH 245
           D E    ++ T 
Sbjct: 229 DDELEQKINETI 240


>gi|167614881|ref|ZP_02383516.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis Bt4]
          Length = 299

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +         +  L  I+    +  G+    V F+         G
Sbjct: 2   MKPFRPLLSIAVGCTLAAAAHAEDASPTLKKIRDTSVVTLGVRESSVPFSYYDQRQQTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I  +       ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I  K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI             + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|83950533|ref|ZP_00959266.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseovarius nubinhibens ISM]
 gi|83838432|gb|EAP77728.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseovarius nubinhibens ISM]
          Length = 287

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 5/257 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K F  + +   +            L  I   G +  G     V FA +  N    G+ +
Sbjct: 4   IKSFMAAAIAASLAVPAIAQNAGGTLEKIAASGEIVLGHRESSVPFAYLDENQKPIGYSI 63

Query: 62  DFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           D C  +  A+         I+Y+P+N K R   + +  ID+   +T   L R     + +
Sbjct: 64  DLCHKIVEAVSAELGKEISIKYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QEQVEY 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            P T+  G   ++ K  GI+++  L G ++ +  GTT E  +    +   +    +    
Sbjct: 122 LPTTFITGTKLLVRKDGGIATIDDLDGKAVALAQGTTNERAVKAAIEEKGLDVKILPVRD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   +    R DAY+ D   L+ L   +  P +  ++ D +S  P A  + + D+ + 
Sbjct: 182 HAEGMLSLETDRVDAYSTDHILLFGLISKSKSPDDFAVVGDFLSFDPYALMVRRDDSAFE 241

Query: 239 NIVSWTHYAMVTAEELG 255
            +      A+  + E+ 
Sbjct: 242 LVGKKALAAVFRSGEIN 258


>gi|319791541|ref|YP_004153181.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315594004|gb|ADU35070.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 299

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 6/243 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF--- 72
              +F+     L  IK  G +  G+     G +    NG + GF  D C  +   +    
Sbjct: 15  TSGAFAQANDTLAKIKASGVITEGVRESS-GLSYTLGNGQYTGFHYDVCANIIKDLEKAA 73

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               ++++ P+ ++ R   +Q+  +DI   +T     R+  +   F   TY +    ++ 
Sbjct: 74  GKKLEVKFQPVTSQNRIPLVQNGTVDIECGSTTNNATRQKDVA--FGVTTYVEETKIVVK 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GI+S++ L   ++    GTT   T+    +A N+ +  +  +   +        R D
Sbjct: 132 ANSGINSLADLKDKTVATTTGTTPLQTVRKQKRAENLSFKEVYGKDHSDSFLLLETGRAD 191

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D S L AL   +  P ++ ILPD+++  P+   I + D  +   V  +  A   + 
Sbjct: 192 AFVMDGSILAALAAKSKSPKDYKILPDVLAVEPIGIMIRKDDPAFKKAVDDSIKAQAKSG 251

Query: 253 ELG 255
           EL 
Sbjct: 252 ELA 254


>gi|66046172|ref|YP_236013.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256879|gb|AAY37975.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 290

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 20/256 (7%)

Query: 2   YKDFFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
                +S++   +L               + S ++S L  IK R  L  G+ +    F  
Sbjct: 4   KTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGF 63

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V   G + GFD D  +  +  +  D  K++++ +    R   LQS ++D++  N   T  
Sbjct: 64  VNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPE 123

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F           ++ +   + ++  L+  +  V  GTT ++ L      ++ 
Sbjct: 124 R--REAVDFTHPNLRVAVQALVPQASPVKTLDDLASKTTIVTTGTTADIWLT----KNHP 177

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            +  + FE+  E   A    R DAY  D   L++       P   V+   +  ++P+APA
Sbjct: 178 DWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPA 235

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+ E  + V+   
Sbjct: 236 VKKGNIELRDWVNTEL 251


>gi|148998282|ref|ZP_01825751.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|168576492|ref|ZP_02722366.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae MLV-016]
 gi|307067225|ref|YP_003876191.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|147755925|gb|EDK62969.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|183577688|gb|EDT98216.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae MLV-016]
 gi|306408762|gb|ADM84189.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
          Length = 264

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTNKRT-----ALLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|237737433|ref|ZP_04567914.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC
           9817]
 gi|229421295|gb|EEO36342.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC
           9817]
          Length = 253

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F +S++ ++ +F +SF  + S L  +K++G+   G++           +G+  GFD
Sbjct: 1   MKK-FLMSLVLMVCVFVSSFGADKS-LETVKEKGYFIVGLDATFAPMGYRDESGEIVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +    ++ P         L+SK ID++      T  R   +   F  
Sbjct: 59  IDLAKEVAKRMGVEA---RFKPCEWDAIIFDLRSKNIDMVWNGMTITPARAKQVA--FTK 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               D Q     K    + V  L+G  + VQ G++   ++ D    +        +    
Sbjct: 114 PYLSDNQIIFTRKGTAPAKVQDLAGKVVGVQLGSSGAQSVEDN-PINKEIKELKKYATNV 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E      A R DA   D  +                  + ++      A+ + D    + 
Sbjct: 173 EALMDLEAGRLDAVVMDEISGKYYNAKKS---TLTYSVETLADEDFGVALRKQDKALVDE 229

Query: 241 VSWTHYAM 248
           ++     M
Sbjct: 230 INRLLDEM 237


>gi|83746652|ref|ZP_00943701.1| Hypothetical Protein RRSL_03562 [Ralstonia solanacearum UW551]
 gi|207739613|ref|YP_002258006.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
 gi|83726605|gb|EAP73734.1| Hypothetical Protein RRSL_03562 [Ralstonia solanacearum UW551]
 gi|206592993|emb|CAQ59899.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
          Length = 288

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 65/318 (20%), Positives = 108/318 (33%), Gaps = 65/318 (20%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALS 68
             L +    + +  A  L DIKK G L+ G+      F    A  G   G DVD+ + ++
Sbjct: 25  AVLAVAVLHAPAARADRLDDIKKAGVLRVGVFDANPPFGFADAKSGQPVGLDVDYAQEIA 84

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++    N   R   L + ++D+++ N   T  R     + F    +  G  
Sbjct: 85  RKLGVK---LELRATNPANRVPLLTAGKVDLIAANFTITDERRK--QIDFSTPYFASGLQ 139

Query: 129 FIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           FI  K   +     L   G  + V  GTT E TL + +         I ++       A 
Sbjct: 140 FIARKG-VLKQPDDLKKDGIRLGVDKGTTQEATLREGYP----NARVIAYDDSPLALTAL 194

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           R+    A+  D + L AL  T    SE  I P ++++  +   + +G+T+  + V     
Sbjct: 195 RSGAIQAFAQDGAKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETQLADTVDRILQ 254

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
                                                      GL KD         G  
Sbjct: 255 -------------------------------------------GLEKD---------GTA 262

Query: 307 GEMFDRNLGNQSELKIPR 324
             ++DR  G +S   +PR
Sbjct: 263 ARIYDRWFGPKSAAPLPR 280


>gi|296132709|ref|YP_003639956.1| extracellular solute-binding protein family 3 [Thermincola sp. JR]
 gi|296031287|gb|ADG82055.1| extracellular solute-binding protein family 3 [Thermincola potens
           JR]
          Length = 260

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 12/259 (4%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K    F +SIL L +LF     T A+      +     K G +     F  V  +G+ 
Sbjct: 1   MKKYLKIFVLSILALSLLFAVGCGTKATTEESKGEDVKTYKVGTDAAYAPFESVAPSGEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDVD  RA++ A   +  +++++    +  F +L+  Q DI+      T  R+  +  
Sbjct: 61  EGFDVDIMRAIAKA---EGFEVEFVNTAWEGIFASLK-GQNDIVISAVTITDDRKKEM-- 114

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +       + K   I+S++ L G  + VQ GTT +  L  +        +   F
Sbjct: 115 DFSEPYFESTNYIAVPKDSNIASLNDLKGKVVAVQEGTTGDEALTKFLGKDY--RNIKRF 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E     R  + DA   D   +      N   +  ++  +   K     A+ +G+TE
Sbjct: 173 KGTPEAFLELRNGKADAAVADSGVVANYVKNNPDANLKIVKDETFPKEYYGIAVAKGNTE 232

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++     +    E  
Sbjct: 233 LLAKINSGLKKIKENGEYD 251


>gi|77461510|ref|YP_351017.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77385513|gb|ABA77026.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 300

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 10/263 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56
           M K   +     ++    + ++       LG +     +  G     V F+ V    G  
Sbjct: 1   MQKITLLGCTLALVFGAQAQASEVPLTGTLGKVASANSITLGYRDASVPFSYVGDHTGQP 60

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+ V+    +   I         K++Y  + ++ R   +Q+  +D+   +T  T  R+ 
Sbjct: 61  MGYSVELADKIVERIKQQLALPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +   F     +     +  +  GI S   L G ++   AGTT E  L  Y   H +   
Sbjct: 121 QVA--FSYGFIYVKGQLLTARDSGIQSFDDLRGKNVVTTAGTTNERYLKSYNLDHKLNMF 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   E     ++ R  A+  D + LY  +     P   V++ +  S+   +  + +
Sbjct: 179 VISAKDHGEAFQMLQSGRAAAFYMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRK 238

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D ++  +V+     + ++ E+ 
Sbjct: 239 DDPQFLALVNGVLADLYSSGEIN 261


>gi|296156268|ref|ZP_06839107.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295893774|gb|EFG73553.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 272

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 111/325 (34%), Gaps = 64/325 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      +++   +L  ++ + +A  L DIKK G L+         F  V        G 
Sbjct: 1   MNLRVLGAVIAGSLLVMSA-AAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGL 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D+ RA+++ +      ++  P N   R   L+S ++D++  N   T  R+    + F 
Sbjct: 60  DIDYARAVANRLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKK--EVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  G  FI  K   ++S  QL+G  I    GTT E  +   F         I ++  
Sbjct: 115 IPYFASGTQFIAKKG-TLTSPQQLNGLRIGADKGTTNEQQVRAQFP----GATIIAYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA R     A T D   L AL       + + I P  IS       + +G+T   N
Sbjct: 170 PFAFAALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLN 229

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V+ T                                                       
Sbjct: 230 VVNDTLKD---------------------------------------------------- 237

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324
           +   G  G+++D   G +S   +PR
Sbjct: 238 LEAKGTAGQIYDTWFGPKSAAPLPR 262


>gi|221198481|ref|ZP_03571527.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2M]
 gi|221208569|ref|ZP_03581570.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2]
 gi|221171560|gb|EEE04006.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2]
 gi|221182413|gb|EEE14814.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2M]
          Length = 301

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79
           +  L  I++   +  G     V F+ V ANG   GF  D C  + +A+         +++
Sbjct: 29  SGTLEKIRQNNLISIGHRETSVPFSYVDANGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++P+ ++ R   +Q+  +D+    T     R   +   F    +      +   + GI  
Sbjct: 89  FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTQSGIRD 146

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G ++    GTT+E  L    +   M    I  +   E      + R  AY  D  
Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDV 206

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L  ++    +P++  I+    S       + + D ++  +V      ++   E+ 
Sbjct: 207 LLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKRGEID 262


>gi|167587241|ref|ZP_02379629.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 271

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 95/253 (37%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L  + L     + +A  L DI+K G L+         F  V A      G 
Sbjct: 1   MKIHTLATWLVGVALVTAGSAAHADRLDDIRKAGVLRVATFDSNPPFGFVDAKTNHIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  +    GTT E+TL + +         + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSAEQLNGLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFAISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAMVTAE 252
            V+ T   +  + 
Sbjct: 231 FVNDTLKGLEASG 243


>gi|310778238|ref|YP_003966571.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747561|gb|ADO82223.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 262

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 80/251 (31%), Gaps = 11/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  + +L       +      IK++G    G++           +G+  GFD
Sbjct: 1   MKKIVLIFLATIALL--GCGKKSTDSYDKIKEQGKFIVGLDDTFAPMGFRDESGEIVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++S +  +     + P         L+S  ID++      T  R     +AF  
Sbjct: 59  IDLAKEVASRMGVEAE---FSPREWSSIVFELKSGNIDMVWNGMTITPER--QEQIAFSE 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             + + Q  +      I +   L G  I VQ G+++   +     + +       +    
Sbjct: 114 PYFANDQIIMTLADSPIQTAEDLKGKIIGVQLGSSSYTLVMKNPISESAS-EIKKYATNA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237
           E      A R DA   D+          +          L   + K      + + D + 
Sbjct: 173 EALMDLEAKRIDAVVMDVIVGEYYAAKKEAREGKDIFKSLDKALGKEDFGVGLRKEDKKL 232

Query: 238 YNIVSWTHYAM 248
              +      M
Sbjct: 233 KKEIDKILDEM 243


>gi|304385261|ref|ZP_07367606.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pediococcus acidilactici DSM 20284]
 gi|304328468|gb|EFL95689.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pediococcus acidilactici DSM 20284]
          Length = 272

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 94/268 (35%), Gaps = 18/268 (6%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEV 50
           M K       V    L+I         A      S    I+ +  +  G++   V     
Sbjct: 1   MKKLVKFSLLVMACALLIPGLAGCGKTAQNNPQPSSWKSIQAKHHVVIGLDDSFVPMGFR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + NG   G+D+D  RA+         K+ +  ++       L+++ +D++      T  R
Sbjct: 61  QKNGKLAGYDIDLARAVFKQYG---IKVDFQTIDWSMNVTELRNQTVDLIWNGLTITDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAH 167
           +    + F      + Q  ++ K + I S   ++G ++ VQ+G++    +  Y    K  
Sbjct: 118 QR--AMTFSEPYLVNQQVLVVKKSQHIHSPQDMTGKTLGVQSGSSGAQDIDRYPKLLKQR 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             K+ P++++         +A R      D             P ++ ++   +     A
Sbjct: 176 IKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYLQHLPNPGDYRVIKSGMPNEYFA 235

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             I +G+ E    +      +    EL 
Sbjct: 236 VGIKKGNQEVKQKIDQGIEHLRKTGELQ 263


>gi|254557099|ref|YP_003063516.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum JDM1]
 gi|254046026|gb|ACT62819.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum JDM1]
          Length = 279

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 89/261 (34%), Gaps = 20/261 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48
           M K  F   L +++L   +             +        IKKRG++  G++   V   
Sbjct: 1   MKKRLFALSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVPMG 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             + +G   G+D+D  RA+         KI +  ++       L++  ID++        
Sbjct: 61  FREKSGKLVGYDIDLARAVFKLYG---IKISFQTIDWSMNATELRNGTIDLIWNGYTKNP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            RE  +   F      + Q  +  KK  I+S   ++G ++ VQ+G++   +L +  K   
Sbjct: 118 QREKVVA--FSNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSSGYESLENNPKLLK 175

Query: 169 M---KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
               K  P+ ++          A R      D              +++           
Sbjct: 176 DKIAKKTPVQYDTFTNAFLDLNAGRIKGLFIDSVYASYYIKHEANSADYQETQGTFKSED 235

Query: 226 LAPAIIQGDTEWYNIVSWTHY 246
            A  + +GD      ++    
Sbjct: 236 FAVGMRKGDKTMKRKINAGLK 256


>gi|251791764|ref|YP_003006485.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247540385|gb|ACT09006.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 278

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/328 (18%), Positives = 108/328 (32%), Gaps = 66/328 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L   ++   + +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKSLLAFSLLAGLVSL-AGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  +A+  A+  +   ++    N   R   L SK++D+++ N   T  R     + F 
Sbjct: 60  DVDVAQAIGKALGVN---VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 115 VPYFATGQKFIARKG-VLKTPDDIKSLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
                A R     A T D + L  L          +  I P  I+K      I +G+   
Sbjct: 170 PLAFTALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGIGIPKGEDRL 229

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              V+                                  L ++K  +             
Sbjct: 230 TQKVNDI-------------------------------LLNLEKQGD------------- 245

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
             ++       +++R  G Q+    PRG
Sbjct: 246 -AVK-------IYNRWFGPQTPSAQPRG 265


>gi|152981667|ref|YP_001351969.1| solute-binding periplasmic protein of glutamate/aspartate ABC
           transporter [Janthinobacterium sp. Marseille]
 gi|151281744|gb|ABR90154.1| solute-binding periplasmic protein of glutamate/aspartate ABC
           transporter [Janthinobacterium sp. Marseille]
          Length = 300

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 6/245 (2%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L           L  IK    +  G     + F+ +       G+ VD C  +   +  D
Sbjct: 20  LVTVQAQDLGGTLKKIKDTNSITIGYRESSIPFSFLDDKQQPIGYAVDLCMKIVDTVKAD 79

Query: 75  ----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 K+   P+ +  R   L++  ID+   +T  + +R     ++F P  +       
Sbjct: 80  LKLPNLKVVMQPVTSSNRIPLLRNGTIDLECGSTTNSKVR--QEQVSFGPNYFVINVTAA 137

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + K   I+S+  L+G +I   +GTT+   L  Y K  N++   I  +   E        R
Sbjct: 138 VKKTSNINSLDDLNGKTISTTSGTTSVPLLKGYKKTENIQVKEIYGKDHAEAFLLMADDR 197

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             A+  D   L      + RP ++ ILP+ +S+ P +  + + D ++  +V  +  A++ 
Sbjct: 198 AVAFVMDNILLAGQIANSKRPGDYKILPESLSQEPYSMMLRKDDPQFKALVDKSIGAVMK 257

Query: 251 AEELG 255
           + E+ 
Sbjct: 258 SGEIN 262


>gi|89897023|ref|YP_520510.1| hypothetical protein DSY4277 [Desulfitobacterium hafniense Y51]
 gi|219667104|ref|YP_002457539.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
 gi|89336471|dbj|BAE86066.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537364|gb|ACL19103.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
          Length = 278

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 67/277 (24%), Positives = 101/277 (36%), Gaps = 29/277 (10%)

Query: 1   MYK--DFFVSILCLIILFFTSFST-------------------NASILGDIKKRGFLKCG 39
           M K      S+  +  L     S+                     + +  IK RG L  G
Sbjct: 1   MKKLGILLASVFLVGSLLAGCGSSTAQQPAQPPAQSGGGSESGAPADVQAIKDRGALSVG 60

Query: 40  INTGLVGFAEVKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           +   + GF       +   GF++D  +AL+  IF DPSKI+   + AK R   L S  +D
Sbjct: 61  VKVDVPGFGYKDPKTNVIDGFEIDLVKALAEEIFGDPSKIKLQAVTAKTRGPLLDSGDVD 120

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
           ++      T  R+      F    Y DG G ++ K  G  S+  L G +I V    T++ 
Sbjct: 121 MVVATFTITEDRKK--SYNFSDPYYIDGVGLLVKKAPGYKSLKDLDGKNIGVAQSATSKT 178

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +        +K     F    EI AA  + R DA++ D S L             ++L 
Sbjct: 179 AVQAEADKLGVKVKFQEFATYPEIKAALDSGRVDAFSVDRSILLGYI-----DDSTMLLD 233

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D  S      A   G+     +V+     M    EL 
Sbjct: 234 DKFSPQEYGVASKLGNDGLAKLVNDKIAEMKGNGELD 270


>gi|313891662|ref|ZP_07825269.1| ABC transporter, substrate-binding protein, family 3 [Dialister
           microaerophilus UPII 345-E]
 gi|313119940|gb|EFR43125.1| ABC transporter, substrate-binding protein, family 3 [Dialister
           microaerophilus UPII 345-E]
          Length = 265

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 7/238 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                 ++++     +K   +  G++           NG+  GFDVD  +A+S  I  + 
Sbjct: 20  LVAGCGSDSAKNDSTQKPKKIIAGLDDTFAPMGFRDENGNIVGFDVDIAKAVSKEIGVE- 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I++ P++   +   L S +ID +      T  RE    + F      + Q +++    
Sbjct: 79  --IEFKPIDWASKESELNSGRIDCIWNGLSITPEREE--KMDFTNPYMNNDQIYVVMDNS 134

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S S L G  IC Q G+T +L L       +       +           A+R DA  
Sbjct: 135 DIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGEIKTYPDFTSCFLDLDANRADAVL 194

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            D     A       P ++  LP+ +S  P A  + +G+ E   +++     +  + E
Sbjct: 195 VDGIL--ADYYMTKSPDKYRRLPEKLSTEPFAIGVKKGNEEIVKMLNEGIEEVKASGE 250


>gi|220928328|ref|YP_002505237.1| extracellular solute-binding protein family 3 [Clostridium
           cellulolyticum H10]
 gi|219998656|gb|ACL75257.1| extracellular solute-binding protein family 3 [Clostridium
           cellulolyticum H10]
          Length = 284

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 27/268 (10%)

Query: 1   MYK-DFFVSILCLIILFF--TSFSTNASI-----------------LGDIKKRGFLKCGI 40
           M K     ++   + L F       +                       +K++G L  G+
Sbjct: 1   MGKGRIIKALAAAMALTFLVAGCGASGDSSKSSGTAASSNIAVDESWDKVKEKGELVMGL 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +           + +  G+D+D  + ++S +      ++  P+N   +   L +  ID +
Sbjct: 61  DENFPPMGFRDEDNNIVGYDLDLAKEVASRLGVK---LKVQPINWDSKDQELNTGNIDCI 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                    R+    + F      + Q  ++      ++   L G S+ +QA ++    L
Sbjct: 118 WNGFSINEERKE--NILFSDPYMKNNQVVVVMADSEYNTFGDLKGKSVSLQAQSSASDAL 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
           A   +  N     I  +         +    DA   D   + A         ++ +L + 
Sbjct: 176 AKNAEFKNSLKDVIELKDNTLCLMDLKTGNTDAVVMDE--VVARYQIQMNSEKYRMLGES 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           ++         +GD +    V+ T   M
Sbjct: 234 LAAEEYGVGFRKGDVKLMTKVNDTLKEM 261


>gi|28378894|ref|NP_785786.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum WCFS1]
 gi|300769713|ref|ZP_07079596.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308181095|ref|YP_003925223.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28271731|emb|CAD64637.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum WCFS1]
 gi|300492756|gb|EFK27941.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308046586|gb|ADN99129.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 279

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 89/261 (34%), Gaps = 20/261 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48
           M K  F   L +++L   +             +        IKKRG++  G++   V   
Sbjct: 1   MKKRLFALSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVPMG 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             + +G   G+D+D  RA+         KI +  ++       L++  ID++        
Sbjct: 61  FREKSGKLVGYDIDLARAVFKLYG---IKISFQTIDWSMNATELRNGTIDLIWNGYTKNP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            RE  +   F      + Q  +  KK  I+S   ++G ++ VQ+G++   +L +  K   
Sbjct: 118 QREKVVA--FSNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSSGYESLENNPKLLK 175

Query: 169 M---KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
               K  P+ ++          A R      D              +++           
Sbjct: 176 DKIAKKTPVQYDTFTNAFLDLNAGRIKGLLIDSVYASYYIKHEANSADYQETQGTFKSED 235

Query: 226 LAPAIIQGDTEWYNIVSWTHY 246
            A  + +GD      ++    
Sbjct: 236 FAVGMRKGDKTMKRKINAGLK 256


>gi|77460756|ref|YP_350263.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77384759|gb|ABA76272.1| L-glutamate-binding protein / L-aspartate-binding protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 304

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D   A+  AI  D    
Sbjct: 23  AAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQLAIVEAIKKDLDLP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +    
Sbjct: 83  NLQVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSVGIFEIGTRLLSKAD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 141 SKYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        + S+  +     S       + +GD  +   V     A   + E+
Sbjct: 201 MMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGDEPFKKAVDDAIKATYASGEI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|315640804|ref|ZP_07895904.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
 gi|315483416|gb|EFU73912.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
          Length = 268

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K + + +L   ++   +     + +  IL   K+   +  G+      F  +  ++ +
Sbjct: 1   MKKIYTMLLLLATVITLGACKSSSAASQDILTTAKETNQIVWGVKNDTKLFGLMDISSRE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            KGFD+D  +A++  I        ++ + +K R   L++  ID +      T  R+    
Sbjct: 61  VKGFDIDIAKAITEEILGRDGNAVFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F  + +  GQ  ++ K   I++V  L+   ++ V  G+T+    AD  +        +
Sbjct: 119 VDFSDVYFDAGQSLLVAKGSPITNVKDLTANDTVLVVKGSTS----ADNIRKAAPDVKVL 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   E   A +A + DA + D + L  +   ND    + ++    +  P   AI +G 
Sbjct: 175 EMENYSEAFTALQAGQGDAVSTDNAILLGMASENDN---YTLVGGTFTNEPYGIAINKGQ 231

Query: 235 TEWYNIVSWTH 245
             + N V+   
Sbjct: 232 ESFLNAVNDAL 242


>gi|262368883|ref|ZP_06062212.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
 gi|262316561|gb|EEY97599.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
          Length = 316

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 88/247 (35%), Gaps = 8/247 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALS 68
                + ++ +  L  IKK G +  G     + F+ +        G+  D       A+ 
Sbjct: 35  AASTGADASQSGTLDKIKKSGTIVLGYRDSSIPFSYIADNPNQPVGYAHDLQLKVVEAVK 94

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +     K++Y  + ++ R   + +  +D+   +T     R     + F    +  G  
Sbjct: 95  QKLNMPDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFEVGSR 152

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +     G+   + L G  +   AGTT+E  +  + K   +    I  +   E     ++
Sbjct: 153 LLTATDSGVKDFADLKGKKLVTTAGTTSERYIRQHEKELGIG-EVISAKDHAESFLMLQS 211

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            R  A+  D   L   K     P++  I+     +      + +GDT +  +V     A 
Sbjct: 212 GRAAAFMMDDILLAGEKSKAKDPNKWHIVGTAPIQEVYGCMLRKGDTGFKQVVDDAIKAT 271

Query: 249 VTAEELG 255
            ++ E+ 
Sbjct: 272 YSSGEIN 278


>gi|257470564|ref|ZP_05634654.1| hypothetical protein FulcA4_14556 [Fusobacterium ulcerans ATCC
           49185]
          Length = 256

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   ++ +I+   + F+ + S L  +KK G+   G++           N +  GFD
Sbjct: 1   MKKLFMAVLVIMILASVSLFAADGS-LEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +    ++ P         L+SK ID++      T  R       F  
Sbjct: 60  IDLAKEVAKRMGVEA---KFKPCEWDGIIFDLRSKNIDMVWNGMTITEQRSKQAA--FTT 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               DGQ     K   I+ VS+L G  + VQ G++    +     A  +K     +    
Sbjct: 115 PYLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGSQAVERNAIAPKLK-EIKKYATNV 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E      A R DA   D  +           +      + +S    A A+ + D    + 
Sbjct: 174 EALLDLEAGRTDAVVMDAISGKYYNAKK---NTLSFSEESLSDEYFAVALRKDDKALLDE 230

Query: 241 VSWTHYAM 248
           ++     M
Sbjct: 231 INRLLDEM 238


>gi|295698917|ref|YP_003606810.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295438130|gb|ADG17299.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 272

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 11/247 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
           K  FV    + +L   S + +A  L DIKK G L+         F           G DV
Sbjct: 2   KIKFVGAAVMGLLLAISGAAHADRLDDIKKAGVLRVATFDSNAPFGFADPKTNQIVGLDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D+ RA+++ +      ++  P N   R   L+S ++D++  N   T  R+    + F   
Sbjct: 62  DYARAVANKLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDERKK--EVDFSTP 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G  FI  K   ++S  Q++G  +    GTT E  +   F         + ++    
Sbjct: 117 YFASGTQFIAKKG-VLTSPQQVNGLRVGADKGTTNEQQVRAQFP----NATIVAYDDTPF 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA RA    A T D   L AL       + + I P  IS       + +G+T   ++V
Sbjct: 172 AFAALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLSVV 231

Query: 242 SWTHYAM 248
             T   +
Sbjct: 232 DDTLKGL 238


>gi|238786077|ref|ZP_04630035.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           bercovieri ATCC 43970]
 gi|238713016|gb|EEQ05070.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           bercovieri ATCC 43970]
          Length = 309

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 93/248 (37%), Gaps = 9/248 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80
             L  IK  G +  G     V F+         G+  D       A+   +     +++ 
Sbjct: 38  DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKL 97

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+   D    +T   L R      +F    +  G   +  K   +   
Sbjct: 98  IPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQASFSNTIFVVGTRLLTKKGSEVKDF 155

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++ V +GTT+E+ L    +  NM    I  +   +      + R  A+  D + 
Sbjct: 156 KDLAGKTVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   +    +P +  I+    S+      + + D  +  ++  T     TA+  G+ +K+
Sbjct: 216 LAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDETI---ATAQTSGVAEKS 272

Query: 261 INQVSKDT 268
            ++  K+ 
Sbjct: 273 FDRWFKNP 280


>gi|187921593|ref|YP_001890625.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187720031|gb|ACD21254.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 312

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 92/246 (37%), Gaps = 9/246 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFD 73
            + +     L  I+ +  +  G     + F+   A     G+ +D        + + +  
Sbjct: 34  AADAAPTGTLKKIQDQHVVTIGYRDASIPFSYYDAQQKPIGYSIDIANLIIDRIKAQLKQ 93

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++ +P+ ++ R   LQ+  ID    +T     R  +  + F    +  G   ++ +
Sbjct: 94  GDLQVRLIPITSQNRISLLQNGTIDFECTSTTNNAAR--AQQVDFSNSFFDIGTRLLVRQ 151

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI   + L G ++ V AGTT+E ++ +     +M  + I  +   E        R  A
Sbjct: 152 NSGIHDFADLKGKTVVVGAGTTSEKSIRNMNVEKSMGMNIISAKDHSESFLMLSTGRAKA 211

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              D + L   +    RP ++ I+    S       + + D +   ++     A+  AE 
Sbjct: 212 MMMDDALLAGERAKTSRPEDYAIVGTPQSFEAYGCMLRKNDAQLKALMDA---AIADAER 268

Query: 254 LGITQK 259
            G+   
Sbjct: 269 SGVATA 274


>gi|313673774|ref|YP_004051885.1| amino acid abc transporter substrate-binding protein, paat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940530|gb|ADR19722.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 268

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 85/250 (34%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  FV    L +    +        S L  I KR  L+ G+  G + F      G+  
Sbjct: 1   MKKLLFVIFSLLFVASLFAADMTVWEKSTLNSIIKRKELRVGLEAGYMPFELKDKKGNII 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  + ++  +      +  +         AL + + DI+      T  R  ++ + 
Sbjct: 61  GFDVDIAKEMAKELGVK---LTLVNTAWDGIIPALLTNKFDIIMSGMTITPQR--NMQVN 115

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F       GQ  ++ K     I S   L+     V          A   K    K    +
Sbjct: 116 FADPYIIVGQTILIRKDLAGKIKSYKDLNDPKYTVVTKLGVTADFA--TKKLMPKAKLRL 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE  +E        + DA+  D+         N        L    +  PLA AI +GD 
Sbjct: 174 FETEQEAAMEVINGKADAFVYDLPYNAIFYAQNKNKLVF--LDKPFTYEPLAWAINKGDP 231

Query: 236 EWYNIVSWTH 245
           ++ N ++   
Sbjct: 232 DFLNWLNNFL 241


>gi|289168422|ref|YP_003446691.1| ABC-type amino acid transporter, substrate-binding protein
           [Streptococcus mitis B6]
 gi|288907989|emb|CBJ22829.1| ABC-type amino acid transporter, substrate-binding protein
           [Streptococcus mitis B6]
          Length = 264

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +   T+     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLTATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     K++Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|310827749|ref|YP_003960106.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612]
 gi|308739483|gb|ADO37143.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612]
          Length = 273

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      + L+++   + +        D    G LK G N   V F     N +  GF
Sbjct: 3   MKKKLVGVSVALMLVASLTLAGCGGKTAEDPLADGVLKIGTNATYVPFEYRDENNEMVGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A++  +        ++       F  L S Q +++   T  T  R+ +  +   
Sbjct: 63  DIDMGNAIAEELGVKAE---WVDTGFDGIFNGLTSNQYEMIIAGTSITEERQKTFNM--S 117

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                +G   +         +   L G  + VQ  TT++   A+    +    +   F+ 
Sbjct: 118 SPYTANGIVIVSRNDGTPAKTADDLKGKKVGVQIETTSD-YAAEKMIENGTDMNLSKFDA 176

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +   A      D    D         T+ +P  + I  + +S  P+   + + DTE+ 
Sbjct: 177 MLDAFTALEGKTIDYILTDKP--VGQFYTSKKPDVYSITSETLSNEPIGITMRKNDTEFS 234

Query: 239 NIVSWTHY 246
             +  T  
Sbjct: 235 QKIEETLQ 242


>gi|299770480|ref|YP_003732506.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter sp. DR1]
 gi|298700568|gb|ADI91133.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter sp. DR1]
          Length = 297

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +S   L  +  TS    A  L  IK  G +  G        + V A G   
Sbjct: 1   MKRSATSLIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L +  ID+    T  +  R+  
Sbjct: 60  GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K  ++    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P    I+  ++S  P    + + 
Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237

Query: 234 DTEWYNIVSWTHY 246
           D ++  I   T  
Sbjct: 238 DPKFKAIADRTVN 250


>gi|271499712|ref|YP_003332737.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270343267|gb|ACZ76032.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 297

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80
             L  IK  G +  G     V F+         G+          A+   +     +++ 
Sbjct: 27  GTLKKIKDNGVITIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRKKLDAPNLQVKL 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+   D+   +T   L R     +AF    +  G   +  K   +   
Sbjct: 87  IPITSQNRIPLLQNGTYDLECGSTTNNLER--QQQVAFSDTIFIIGTRLLTKKDSDVKDF 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           S L+G ++ V +GTT+E+ L    +   +    I  +   +      + R  A+  D + 
Sbjct: 145 SDLAGKAVVVTSGTTSEVLLNKMNEEKKLNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 204

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L   +     P E VI     S+      + + D ++  +V  T   + T+ E  
Sbjct: 205 LAGERAKAKAPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQVQTSGEAE 259


>gi|160896811|ref|YP_001562393.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160362395|gb|ABX34008.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 299

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 8/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I    +   ++F+     L  IK  G +  G+     G      NG + GF 
Sbjct: 1   MKKHLL-AIAVTALAAGSAFAQAGDTLAKIKSSGAVTLGVRESS-GLGYTLGNGKYVGFH 58

Query: 61  VDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    + +     +      I+Y P+ ++ R   + +  +D+   +T  +  R+  +  
Sbjct: 59  TEMGERVLADIQKELGLAKLDIKYQPVTSQNRIPLVTNGTVDLECGSTTNSQARQKDVA- 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +     +    GI+ +  L+G +I    GTT+  TL    +A  + +  ++ 
Sbjct: 118 -FAVTTYVEEVRIAVKGNSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D S L A    +  P+++ I+ + +S  P+A  + + D  
Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKAPADYKIVGETLSVEPIACMLRKDDPA 236

Query: 237 WYNIVSWTHYAMVT 250
           +   V  +    + 
Sbjct: 237 FKKAVDDSIKRQIA 250


>gi|15893671|ref|NP_347020.1| periplasmic amino acid-binding protein [Clostridium acetobutylicum
           ATCC 824]
 gi|15023229|gb|AAK78360.1|AE007552_10 Periplasmic amino acid-binding protein [Clostridium acetobutylicum
           ATCC 824]
 gi|325507793|gb|ADZ19429.1| Periplasmic amino acid-binding protein [Clostridium acetobutylicum
           EA 2018]
          Length = 272

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 22/257 (8%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEV 50
           M K           +++ + +L   S + ++S    L  +KK G LK G++         
Sbjct: 1   MKKSVKKIMAVILTAVIGVGLLAGCSSTGSSSNDESLSKVKKAGVLKVGLSDDYPPMEFR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            +N    GFD+D   A+   +      +Q +  +    F+AL++K+ D++      T  R
Sbjct: 61  DSNNKVSGFDIDMINAIGKKMGVK---VQIVTNSFDGIFVALKAKKFDMVQSCVSITDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           + +  L F     + G    + K    I     L G  +  QAGTT E  L  +      
Sbjct: 118 KST--LLFSDPYIYGGVAVFVKKSNTTIKKPEDLKGKVVGCQAGTTAEDALKKFNGLK-- 173

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 +++  +       +R +A   D   +     T   P ++  +   + K P+  A
Sbjct: 174 --ETKKYQQTTDAFLDLENNRIEAVVADP--MVGDYYTTKNPGKYEKISKYLGKEPVGAA 229

Query: 230 IIQGDTEWYNIVSWTHY 246
             + D    +     + 
Sbjct: 230 FRKQDKTLKDAYQKAYN 246


>gi|322508165|gb|ADX03619.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii 1656-2]
          Length = 297

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 93/253 (36%), Gaps = 10/253 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      VS + L  +  TS    A  L  IK  G +  G        + V A G   
Sbjct: 1   MKRSATSLIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L +  ID+    T  +  R+  
Sbjct: 60  GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K   +    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P    I+  ++S  P    I + 
Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237

Query: 234 DTEWYNIVSWTHY 246
           D ++  I   T  
Sbjct: 238 DPKFKAIADRTVN 250


>gi|257093422|ref|YP_003167063.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045946|gb|ACV35134.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 301

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 89/246 (36%), Gaps = 7/246 (2%)

Query: 15  LFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSS 69
           +  T+ + +    L  IK  G +  G     + F+         G+  +       A+ +
Sbjct: 19  MSITALAQDLTGTLKKIKDTGAITLGHRESSIPFSYYDDKQQVIGYSQEMMLKAVDAIKA 78

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +      I+ +P+ ++ R   +Q+  +D+   +T  T  R+    ++F    +  G   
Sbjct: 79  ELKLAKLDIKLMPVTSENRITLVQNGSVDLECGSTTNTTERQK--QVSFSNSIFVVGTRM 136

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +     GI     L+G ++   AGTT+E  L    + +NMK   I  +   E        
Sbjct: 137 LTRSNSGIKDFPDLAGKTVVTTAGTTSERLLRKMNEDNNMKVKIISAKDHGESFLTLETG 196

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R  A+  D   LY         +E  ++    S       + + D     +V      ++
Sbjct: 197 RATAFVMDEVLLYGETAKAKNINEWAVVGTPQSYEAYGCMMRKDDPALKKVVDAALAKVM 256

Query: 250 TAEELG 255
           T+ E  
Sbjct: 257 TSGEAE 262


>gi|270290989|ref|ZP_06197212.1| polar amino acid transport system substrate-binding protein
           [Pediococcus acidilactici 7_4]
 gi|270280385|gb|EFA26220.1| polar amino acid transport system substrate-binding protein
           [Pediococcus acidilactici 7_4]
          Length = 272

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 95/268 (35%), Gaps = 18/268 (6%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEV 50
           M K       V    L+I         A      S    I+ +  +  G++   V     
Sbjct: 1   MKKLVKFSLLVMACALLIPGLAGCGKTAQNNPQPSSWKSIQAKHHVVIGLDDSFVPMGFR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + NG   G+D+D  RA+         K+ +  ++       L+++ +D++      T  R
Sbjct: 61  QKNGKLAGYDIDLARAVFKQYG---IKVDFQTIDWSMNVTELRNQTVDLIWNGLTITDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAH 167
           + ++   F      + Q  ++ K + I S   ++G ++ VQ+G++    +  +    K  
Sbjct: 118 QRAMA--FSEPYLVNQQVLVVKKSQHIHSPQDMTGKTLGVQSGSSGAQDIDRFPKLLKQR 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             K+ P++++         +A R      D             P ++ ++   +     A
Sbjct: 176 IKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYLQHLPNPGDYRVIKSGMPNEYFA 235

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             I +G+ E    +      +    EL 
Sbjct: 236 VGIKKGNQEVKQKIDQGIEHLRKTGELQ 263


>gi|169834023|ref|YP_001694088.1| glutamine ABC transporter substrate-binding protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|168996525|gb|ACA37137.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae Hungary19A-6]
          Length = 264

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++        KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEF---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSKRT-----ALLNDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDTLVTKW 241


>gi|325524104|gb|EGD02268.1| extracellular solute-binding protein [Burkholderia sp. TJI49]
          Length = 298

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 8/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +      + L      +         L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRIRWLAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +   +  +       ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIEQLKTELNLPGLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+   + L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDD 238

Query: 235 TEWYNIVSWTH 245
             + ++V    
Sbjct: 239 PAFKHVVDGVI 249


>gi|170751122|ref|YP_001757382.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657644|gb|ACB26699.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 299

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 92/260 (35%), Gaps = 10/260 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    + +   +         A      L  +K  G +  G     V F+ +  N    G
Sbjct: 2   RILKHAAIAATMTLALMTGAKADDLTGTLKKVKDTGTITLGYRESSVPFSYLDGNQKPVG 61

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           F +D C     A+ + +     K+ Y P+N+  R   + +  +D+   +T   L+R+  +
Sbjct: 62  FSIDVCGKVVEAVKTKLGMPDLKVAYTPVNSATRLPLVANGTVDLECGSTANQLVRQKQV 121

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F   T+     ++     GI++   L    + V AGT T   L    +   +K    
Sbjct: 122 A--FSVSTFVAQFKWLTRSDSGITTPDDLKSKMVAVTAGTNTSQFLNKLNQEDGLKLTIA 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   L  LK     PS   IL    S  P A    + D
Sbjct: 180 QGKDHAESFLLVETGRAAAFMEDDILLAGLKANAKDPSRFKILDKAYSADPYALMFRRED 239

Query: 235 TEWYNIVSWTHYAMVTAEEL 254
            E+  +V  T   ++ + E 
Sbjct: 240 PEFKALVDETLIGLMRSGEF 259


>gi|312797284|ref|YP_004030206.1| glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI
           454]
 gi|312169059|emb|CBW76062.1| Glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI
           454]
          Length = 297

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 6/237 (2%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PS 76
           +     L  IK  G +  G     + F+      +  G+  +    +  A+  +      
Sbjct: 22  AQEMETLKKIKDSGVIALGHRESSIPFSYYDEKQNVVGYSQELALKIVEAVKHELKTPDL 81

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K++ +P+ ++ R   +Q+  IDI   +T   L R+      F    +  G   +  K  G
Sbjct: 82  KVKLIPITSQNRIPLVQNGTIDIECGSTTNNLDRQKQAA--FSNTIFVVGTRLMTKKDSG 139

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I   + L G ++   AGTT+E  L    + HNM  + I  +   E        R  A+  
Sbjct: 140 IKDFADLKGKTVVTTAGTTSERLLRKLNQDHNMGMNIISAKDHGESFLTLSTGRAAAFMM 199

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           D + L   +  +  P + VI+    S       + +GD  +  +V      + T+ E
Sbjct: 200 DDALLAGERAKSSHPGDFVIVGTPQSHEAYGCMMRKGDPAFKKVVDAAIAKVETSGE 256


>gi|167588750|ref|ZP_02381138.1| extracellular solute-binding protein family 3 [Burkholderia
           ubonensis Bu]
          Length = 302

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 83/255 (32%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M + +    + L      + +           L  IK  G +  GI    V F+      
Sbjct: 1   MDRRYRWLAVTLSFALPCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQ 60

Query: 55  DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+  D    +   +  +       ++ +P+ ++ R   LQ+  ID    +T  TL R
Sbjct: 61  KNIGYSRDIASRIVEQLKTELNLPGLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F    +  G  F   K  G+     L+G ++   AGT+ E  L    +   M 
Sbjct: 121 QKQAA--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMN 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   E        R  A+  D   LY     +  P  + +    +     A  +
Sbjct: 179 MTIISAKDHAEAFMNVTTGRAVAFVMDEPLLYGELAKDRNPGAYTVTGTPLVHENYACMM 238

Query: 231 IQGDTEWYNIVSWTH 245
            + D  +  +V    
Sbjct: 239 RRDDPAFKRVVDGVI 253


>gi|149005718|ref|ZP_01829457.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|225856308|ref|YP_002737819.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae P1031]
 gi|303260101|ref|ZP_07346074.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|303261285|ref|ZP_07347233.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|303263950|ref|ZP_07349871.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS397]
 gi|303265941|ref|ZP_07351837.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS457]
 gi|303268323|ref|ZP_07354120.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS458]
 gi|147762658|gb|EDK69618.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|225724646|gb|ACO20498.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae P1031]
 gi|302637419|gb|EFL67906.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638796|gb|EFL69258.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|302642161|gb|EFL72511.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS458]
 gi|302644525|gb|EFL74776.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS457]
 gi|302646355|gb|EFL76581.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS397]
          Length = 264

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S  +    + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|260550662|ref|ZP_05824871.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
 gi|260406373|gb|EEW99856.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
          Length = 297

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      VS + L  +  TS    A  L  IK  G +  G        + V   G   
Sbjct: 1   MKRSATSLIVSTIMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVG-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L +  ID+    T  +  R+  
Sbjct: 60  GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K  ++    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSLNVQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P    I+  ++S  P    I + 
Sbjct: 178 IYGKDHSDSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237

Query: 234 DTEWYNIVSWTHY 246
           D ++  I   T  
Sbjct: 238 DPKFKAIADRTVN 250


>gi|169796221|ref|YP_001714014.1| glutamate/aspartate ABC transporter substrate-binding protein
           [Acinetobacter baumannii AYE]
 gi|184157850|ref|YP_001846189.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii ACICU]
 gi|213157045|ref|YP_002319090.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Acinetobacter
           baumannii AB0057]
 gi|215483676|ref|YP_002325897.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter baumannii AB307-0294]
 gi|239502273|ref|ZP_04661583.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter baumannii AB900]
 gi|260555283|ref|ZP_05827504.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC
           19606]
 gi|294838744|ref|ZP_06783427.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter sp. 6013113]
 gi|294841311|ref|ZP_06785994.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter sp. 6014059]
 gi|294859044|ref|ZP_06796813.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter sp. 6013150]
 gi|301347722|ref|ZP_07228463.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter baumannii AB056]
 gi|301512792|ref|ZP_07238029.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter baumannii AB058]
 gi|301596773|ref|ZP_07241781.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter baumannii AB059]
 gi|169149148|emb|CAM87027.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           [Acinetobacter baumannii AYE]
 gi|183209444|gb|ACC56842.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Acinetobacter baumannii
           ACICU]
 gi|193077140|gb|ABO11918.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
 gi|213056205|gb|ACJ41107.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Acinetobacter
           baumannii AB0057]
 gi|213988773|gb|ACJ59072.1| Glutamate/aspartate periplasmic-binding protein precursor
           [Acinetobacter baumannii AB307-0294]
 gi|260411825|gb|EEX05122.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC
           19606]
 gi|323517739|gb|ADX92120.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 297

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 93/253 (36%), Gaps = 10/253 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      VS + L  +  TS    A  L  IK  G +  G        + V A G   
Sbjct: 1   MKRSATSLIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L +  ID+    T  +  R+  
Sbjct: 60  GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K   +    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P    I+  ++S  P    I + 
Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237

Query: 234 DTEWYNIVSWTHY 246
           D ++  I   T  
Sbjct: 238 DPKFKAIADRTVN 250


>gi|254173137|ref|ZP_04879810.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermococcus sp. AM4]
 gi|214032546|gb|EEB73375.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermococcus sp. AM4]
          Length = 253

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 21/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M       +L L++    + S          +     L  G +     F       G+  
Sbjct: 1   MNGKIIGGLLVLMLAAAVASSGCIGGGSKEKV-----LIVGTSADFPPFEYKDPQTGNIT 55

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  + ++     D   ++   ++      ALQ+ ++D++      T  R+    + 
Sbjct: 56  GFDIDLIKMVAKKAGYDK--VEIKDMDFDSLIPALQTGKVDVVIAGMTITEKRK--QVVD 111

Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    +   Q  ++ K     I+S+  L G  I V+ GTT  + + D+      +     
Sbjct: 112 FSIPYWKADQAVVVRKDSDIAINSLDDLKGKVIGVEKGTTGAIYIKDHL---GDQVTLKE 168

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +        A    + D    D               +  ++  I +      A+ +G+ 
Sbjct: 169 YNSYVAALQALLNGQVDVLVIDSPV----ANMFTNKYDVKVVYTINTNEHYGIAVKKGNK 224

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E  + ++     ++ + E  
Sbjct: 225 ELLDKINKALQDIMNSPEWN 244


>gi|307126808|ref|YP_003878839.1| glutamine ABC transporter substrate-binding protein/Major cell
           binding factor [Streptococcus pneumoniae 670-6B]
 gi|306483870|gb|ADM90739.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae 670-6B]
          Length = 269

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR DA++ D S L              +L D    S  +    + +TE 
Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|170696121|ref|ZP_02887256.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170138936|gb|EDT07129.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 272

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 12/247 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      +++   +L  ++ + +A  L DIKK G L+         F  V        G 
Sbjct: 1   MNLRVLGAVIAGSLLVMSA-AAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGL 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ RAL++ +      ++  P N   R   L+S ++D++  N   T  R+    + F 
Sbjct: 60  DVDYARALATRLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKK--EVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  G  FI  K   ++S  QL+G  I    GTT E  +   F +       I ++  
Sbjct: 115 IPYFASGTQFIAKKG-TLTSPQQLNGLRIGADKGTTNEQQVRAQFPSA----TIIAYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA R     A T D   L AL       + + I P  IS       + +G+T   N
Sbjct: 170 PFAFAALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLN 229

Query: 240 IVSWTHY 246
           +V+ T  
Sbjct: 230 VVNDTLK 236


>gi|253582766|ref|ZP_04859986.1| extracellular solute-binding protein [Fusobacterium varium ATCC
           27725]
 gi|251835342|gb|EES63883.1| extracellular solute-binding protein [Fusobacterium varium ATCC
           27725]
          Length = 256

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   ++ ++    + F+ + S L  +KK G+   G++           N +  GFD
Sbjct: 1   MKKLFMAVLVIMVSASISLFAADNS-LEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   +++ P         L+SK ID++      T  R       F  
Sbjct: 60  IDLAKEVAKRMGVE---VKFKPCEWDGIIFDLRSKNIDMVWNGMTITEERSKQAA--FST 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               DGQ     K   I+ VS+L G  + VQ G++    +     A  +K     +    
Sbjct: 115 PYLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGAQAVERNAIAPKLKG-IKKYATNV 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E      A R DA   D  +           +      + +S    A A+ + D    + 
Sbjct: 174 EALLDLEAGRTDAVVMDAISGKYYNAKK---NTLSFSEESLSDEYFAIALRKDDKALLDE 230

Query: 241 VSWTHYAM 248
           ++     M
Sbjct: 231 INRLLDEM 238


>gi|237798757|ref|ZP_04587218.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021610|gb|EGI01667.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 308

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 84/236 (35%), Gaps = 7/236 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
             L  IK+ G +  G     + F+ +  A+G   G+  D    +  AI  D      K++
Sbjct: 32  GTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMPALKVK 91

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  + ++ R   +Q+  +D+   +T   + R+    + F    +  G   +  K      
Sbjct: 92  YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQK--QVDFSTGIFEVGTRLLSKKDSSYKD 149

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++   AGTT+E  +        M  + I  +   E      + R  A+  D +
Sbjct: 150 FDDLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 209

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L        +P +  +     S       + +GD  +   V     A   + ++ 
Sbjct: 210 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATFKSGDIN 265


>gi|91789746|ref|YP_550698.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91698971|gb|ABE45800.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 298

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 6/243 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72
              + +     +  +K  G +  G+     G +    +G + G+ VD C+ + + +    
Sbjct: 15  TGGAIAQANDTIAKVKASGVVTMGVRDSS-GLSFTLGDGKYAGYHVDVCQRILARLEKTV 73

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +++YLP+ ++ R   +Q+  +DI   +T     R+  +   F   T+ +     + 
Sbjct: 74  GKKLEVKYLPVTSQNRIPLVQNGTVDIECGSTTNNATRQKDVA--FAVTTFVEEVRIAVK 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GI+S++QL+G S+    GTT+  TL    +A  + +  +  +   +      + R D
Sbjct: 132 ADSGITSIAQLNGKSVATTTGTTSVQTLRKNERATGIDFKEVFGKDHSDSFLLLESGRAD 191

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D S L +    +  P+   I+ +++S  P+A  + + D  +  +   T   ++ + 
Sbjct: 192 AFVMDGSILASNIANSKNPAGFKIVGEVLSVEPIAIMMRKDDPAFKKLSDDTIKDLIKSG 251

Query: 253 ELG 255
           EL 
Sbjct: 252 ELA 254


>gi|326315074|ref|YP_004232746.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323371910|gb|ADX44179.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 305

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 105/246 (42%), Gaps = 8/246 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFC----RALSSA 70
              + +     L  IK+ G +  G     + F+     G +  GF  D C     A+ + 
Sbjct: 24  GAAASAQEIDTLARIKQTGVITIGSRDSSIPFSYSPKGGSEPVGFSNDICLKIVDAVKAK 83

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     ++QY  LN+  R   +Q+  +D+    T  +++R+  +   F P  +  G    
Sbjct: 84  LGLPALRVQYTLLNSLNRIPLMQNGTVDLDCATTTNSVVRQQMVA--FAPSHFVAGITVA 141

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + K  GI+S+S L+G ++   AG+T+   L  Y +A  ++   +  +   +        R
Sbjct: 142 VKKNSGINSLSDLAGKTVATVAGSTSVQLLRTYKRAEALEVRELSGKDTADAFLLLANGR 201

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            DAY  D   L  L  ++  P E+ +L D++  + P      + D ++  +V  T   ++
Sbjct: 202 ADAYVLDDVQLAGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEALVDETVTQLM 261

Query: 250 TAEELG 255
            + ++ 
Sbjct: 262 KSGDME 267


>gi|161507099|ref|YP_001577053.1| glutamine ABC transporter [Lactobacillus helveticus DPC 4571]
 gi|160348088|gb|ABX26762.1| Glutamine ABC transporter [Lactobacillus helveticus DPC 4571]
          Length = 272

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 96/251 (38%), Gaps = 14/251 (5%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASIL--GDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K FF+   ++ + +   ++ S N   +    +K    +  G+      F  +    G 
Sbjct: 1   MKKRFFLPTLLIGIALFTLSACSQNKKQIVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D  +AL+  +  + +K  ++   A  +   L+++ +D +      T  RE    
Sbjct: 61  INGFEIDLAKALTKEMLSNNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ   + K   I +V  L+   + V  GTT    +  +          + 
Sbjct: 119 VDFSKPYFPAGQSITVAKNSKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +  AA +A + DA+  D   L          S + ++    +  P   A+ +G T
Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231

Query: 236 EWYNIVSWTHY 246
           E    ++    
Sbjct: 232 EMDKQINLALT 242


>gi|50085186|ref|YP_046696.1| glutamate/aspartate ABC transporter substrate-binding protein
           [Acinetobacter sp. ADP1]
 gi|49531162|emb|CAG68874.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           [Acinetobacter sp. ADP1]
          Length = 297

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 95/262 (36%), Gaps = 10/262 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M        VS   +  +   +    A  L  IK  G +  G        + V A G   
Sbjct: 1   MKHSATSLLVSAFMICTVGGATQVQAADTLAKIKSSGKIIIGHRESSDPISYVVA-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L S  ID+    T  +  R+  
Sbjct: 60  GYAVDICNNFANDIKKELKMPNLKVEYKAVTSSTRIPELLSGNIDMECGTTTNSKQRQQQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K  ++    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P E  I+  ++S  P    I + 
Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSNPKEFAIVGPVLSSEPYGIMIAKD 237

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D ++  +   T   M    ++ 
Sbjct: 238 DPKFKALADRTVTGMWKTGQMD 259


>gi|55823483|ref|YP_141924.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus thermophilus CNRZ1066]
 gi|116628268|ref|YP_820887.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|55739468|gb|AAV63109.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus thermophilus CNRZ1066]
 gi|116101545|gb|ABJ66691.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
 gi|312278892|gb|ADQ63549.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           ND03]
          Length = 284

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
            K F +  L   ++  T+          +  A  + +IKK G L+  +      F  V  
Sbjct: 5   KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G+D++    L+  +   P   +Y+ ++A  R   L S ++DI   N   T  R+ 
Sbjct: 65  KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I  V +L G ++ V  GTT E      F+ +     
Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +++  +   A    R DA++ D + + A     +     V +  +     +APA+ +
Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAPAVQK 233

Query: 233 GDTEWYNIVSW 243
           G+ E  + ++ 
Sbjct: 234 GNKELLDFINK 244


>gi|58198299|gb|AAW65857.1| putative lipoprotein P30Hm13 [Helicobacter muridarum]
          Length = 268

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 14/256 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           K F  +++ +I +   + S + +       +  IKKRG L  G+      FA +      
Sbjct: 9   KLFIGALIAIIGMLAIACSESGNNKKANNQIEAIKKRGVLIVGVKKDAPNFALMNHKTQQ 68

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF++D  + L+  +  D +KI+  P+ AK R   L +  +DI+      T  R+ +  
Sbjct: 69  IEGFEIDMAKMLAKQMLGDENKIKLEPVTAKTRGPLLDNGTLDIVIATFTITDERKKT-- 126

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y D  GF++ K+    S   L    I V    TT   + +      +      
Sbjct: 127 YNFTESYYSDPIGFLVLKENNFKSFKDLDDKVIGVAQAATTNKVVTEAAADLGITVKIKE 186

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F     + +A  + R DA++ D S L          + + IL D +       A  + D 
Sbjct: 187 FPDYPSLKSALDSKRIDAFSVDKSILRGYL-----DANNEILDDNLKAQEYGMATRKEDI 241

Query: 236 EWYNIVSWTHYAMVTA 251
           +W N V+         
Sbjct: 242 DWSNYVNNFVKDNKQT 257


>gi|317064770|ref|ZP_07929255.1| extracellular amino acid-binding protein [Fusobacterium ulcerans
           ATCC 49185]
 gi|313690446|gb|EFS27281.1| extracellular amino acid-binding protein [Fusobacterium ulcerans
           ATCC 49185]
          Length = 287

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   ++ +I+   + F+ + S L  +KK G+   G++           N +  GFD
Sbjct: 32  MKKLFMAVLVIMILASVSLFAADGS-LEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFD 90

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +    ++ P         L+SK ID++      T  R       F  
Sbjct: 91  IDLAKEVAKRMGVEA---KFKPCEWDGIIFDLRSKNIDMVWNGMTITEQRSKQAA--FTT 145

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               DGQ     K   I+ VS+L G  + VQ G++    +     A  +K     +    
Sbjct: 146 PYLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGSQAVERNAIAPKLK-EIKKYATNV 204

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E      A R DA   D  +           +      + +S    A A+ + D    + 
Sbjct: 205 EALLDLEAGRTDAVVMDAISGKYYNAKK---NTLSFSEESLSDEYFAVALRKDDKALLDE 261

Query: 241 VSWTHYAM 248
           ++     M
Sbjct: 262 INRLLDEM 269


>gi|326204706|ref|ZP_08194561.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
 gi|325985077|gb|EGD45918.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
          Length = 294

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 81/278 (29%), Gaps = 37/278 (13%)

Query: 1   MYK----DFFVSILCLIILFFTS--------------------------FSTNASILGDI 30
           M K        S + L  L                               ST       +
Sbjct: 1   MKKGKLIKVLASAMALTFLIAGCGTPGDSSSSSSTASESKVAENTAVSNTSTGEKSWDKV 60

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K +G L  G++           N +  G+D+D  + +++ +      ++  P+N   +  
Sbjct: 61  KDKGELVLGLDENFPPMGFRDGNNNIVGYDIDLAKEVAARLGVK---LKIQPINWDSKDQ 117

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            L +  ID +         R+    + F      + Q  ++       +++ L G S+ +
Sbjct: 118 ELNTGNIDCIWNGFSINEERKA--NILFSDPYMKNNQVVVVAADSKFKTLADLKGKSVSL 175

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           QA ++    +             +  +         +    D    D   + A       
Sbjct: 176 QAQSSAADAIDKNTDFKKSLKDVVELKDNTLCLMDLKTGNTDGVVMDE--IVARYQIKMN 233

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             ++ IL + ++         + D +    V+ T   M
Sbjct: 234 SEKYRILDESLAAEEYGVGFRKADVQLMTKVNDTLKTM 271


>gi|323698009|ref|ZP_08109921.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323457941|gb|EGB13806.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 253

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 86/252 (34%), Gaps = 18/252 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     +   +    + +  F +F+   + L  IK +G +  G +     F  +   G+ 
Sbjct: 1   MKFNKMRMLLMLAAIISLCAFATFAQAGTTLDKIKAKGVITVGNSPDYPPFESIGDGGER 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD   A+++ +      +Q++ ++      A QS Q+D+       T  R     +
Sbjct: 61  VGFDVDLLNAIAAKMGVK---VQWVTMDFAAIVTATQSGQVDMGMSGFSVTPERAG--QV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +F    +  GQ  ++     I S + L G  I VQ GTT E        A       +  
Sbjct: 116 SFSAPYFASGQALVVRNDSDIKSAADLKGKKIAVQLGTTGEQEADKIEGA-----EVVKP 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E              DA   DIS                   + ++    A    +G+  
Sbjct: 171 ESYNIAFMMLGNKVADAVVADISVADEFVKQGK----FKRAGEPLTFEEFAMITRKGNDA 226

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 227 LLQALNQGLEAV 238


>gi|113866501|ref|YP_724990.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113525277|emb|CAJ91622.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 299

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 8/252 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                ++   ++  T+ +       L  IK  G +  G+    + F          G+  
Sbjct: 5   KLAALMIAGGVMCGTAQAAEQLTGTLKKIKDTGVITLGVRESSIPFNYNLGGVRQVGYSY 64

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     +++ +P+ ++ R   LQ+  IDI   +T   L R+  +G  
Sbjct: 65  DINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQVG-- 122

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + I  +
Sbjct: 123 FTNSIFIIGTRIMVKKDAGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGVNIISTK 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R  A+  D + LY  +     P++ +++    S+      I + D ++
Sbjct: 183 DHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSRESYGCMIRKDDPQF 242

Query: 238 YNIVSWTHYAMV 249
             +       M+
Sbjct: 243 KKLSDTVISGMM 254


>gi|312863687|ref|ZP_07723925.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus vestibularis F0396]
 gi|322516243|ref|ZP_08069175.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
 gi|311101223|gb|EFQ59428.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus vestibularis F0396]
 gi|322125307|gb|EFX96672.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
          Length = 284

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
            K F +  L   ++  T+          +  A  + +IKK G L+  +      F  V  
Sbjct: 5   KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G+D++    L+  +   P   +Y+ ++A  R   L S ++DI   N   T  R+ 
Sbjct: 65  KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I  V +L G ++ V  GTT E      F+ +     
Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +++  +   A    R DA++ D + + A     +     V +  +     +APA+ +
Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAPAVQK 233

Query: 233 GDTEWYNIVSW 243
           G+ E  + ++ 
Sbjct: 234 GNKELLDFINK 244


>gi|257887550|ref|ZP_05667203.1| extracellular solute-binding protein [Enterococcus faecium
           1,141,733]
 gi|257898672|ref|ZP_05678325.1| extracellular solute-binding protein [Enterococcus faecium Com15]
 gi|257823604|gb|EEV50536.1| extracellular solute-binding protein [Enterococcus faecium
           1,141,733]
 gi|257836584|gb|EEV61658.1| extracellular solute-binding protein [Enterococcus faecium Com15]
          Length = 271

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56
            K   + +L +  L           N  IL   K    +  G+      F  +   +   
Sbjct: 5   KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDVD  +A++  I  +  K +++ + +K R   L++  ID +      T  R+    +
Sbjct: 65  QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175
            F  + +  GQ  ++ K   I SV  L+ ++      G+T+   +  +    N     + 
Sbjct: 123 DFSDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E   E   A ++ + DA T D + L  +   ++ P E+ ++    +  P   AI +G  
Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235

Query: 236 EWYNIVSWTH 245
            +   V+   
Sbjct: 236 NFLKAVNQAL 245


>gi|222152719|ref|YP_002561895.1| glutamine-binding protein [Streptococcus uberis 0140J]
 gi|222113531|emb|CAR41318.1| putative glutamine-binding protein precursor [Streptococcus uberis
           0140J]
          Length = 271

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 18/276 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN- 53
            K  F  ++ L+ L F   ++           +  IKK G L+ G+   +  F    A+ 
Sbjct: 5   KKWTFFCLMTLLTLIFMPKASADDNQLLKTKSIQTIKKAGVLRVGVKQDVPNFGYYSADT 64

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G ++G +VD  R ++  +   P    +  + A+ R   L + Q+DI+      T   E  
Sbjct: 65  GKYEGMEVDLARKIAKKLKVKP---VFTAVTAQTREALLDNGQLDIIIATYTITP--ERQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              +F    Y D  GF++++ + I S+  L+  +I V  G+TT+  + +Y KAH++ +  
Sbjct: 120 ANYSFSIPYYRDEVGFLVNQSEKIDSIKDLNHRTIGVAQGSTTKAAIEEYGKAHHLDFKF 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +      E+  +  + R  A++ D S L              ILPD  ++     A  + 
Sbjct: 180 VQLGSYPELAISLYSKRIQAFSVDKSILSGYVSKQT-----AILPDGFNQQSYGIASSKA 234

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +++    ++           L    KN       + 
Sbjct: 235 NSQLTKYINQLIEEWTNDGSLQAIYKNYGLKPAKSE 270


>gi|15902578|ref|NP_358128.1| amino acid ABC transporter amino acid-binding protein
           [Streptococcus pneumoniae R6]
 gi|116516520|ref|YP_816032.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae D39]
 gi|15458109|gb|AAK99338.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor precursor
           [Streptococcus pneumoniae R6]
 gi|116077096|gb|ABJ54816.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae D39]
          Length = 264

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K FF+S L + +    +     A   + DI+KRG L  G+   +  F       G + 
Sbjct: 1   MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G + D  + ++  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      
Sbjct: 61  GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y D  GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +   
Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+  +  AHR D ++ D S L              +L D    S       + +TE 
Sbjct: 176 SYPELITSLHAHRIDTFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEL 230

Query: 238 YNIVSWTHYAM 248
            + +       
Sbjct: 231 NDYLDNLVTKW 241


>gi|85704883|ref|ZP_01035984.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseovarius sp. 217]
 gi|85670701|gb|EAQ25561.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding
           protein [Roseovarius sp. 217]
          Length = 291

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 7/258 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +           L   +         L  I   G +  G     V F+ +      +G+ 
Sbjct: 7   RRMLAIAALTTGLAPAALWGQDLTGTLAKINDSGEIVLGHRESSVPFSYLNDQQQPEGYS 66

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           +D C  +   +        +++Y+P+N K R   + +  ID+   +T   L R     + 
Sbjct: 67  IDLCMKVVEEVEKTLGKDIEVRYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QQQVE 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           + P+T+  G   +  K+ GI+SV+ L G SI +  GTT E  +    +A  +    +   
Sbjct: 125 YLPVTFVTGTKILTRKESGITSVADLDGKSIALAQGTTNERAIKAVVEAQGLDVKILPVR 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   +    R DAY+ D   L+ L   +  P E  ++ D +S  P A  + + D+ +
Sbjct: 185 DHAEGMLSLETDRVDAYSTDHILLHGLIAKSKTPDEFAVVGDFLSFDPYALMVRRDDSAF 244

Query: 238 YNIVSWTHYAMVTAEELG 255
             +       +  + E+ 
Sbjct: 245 ELVGKTALANVFRSGEIN 262


>gi|228477047|ref|ZP_04061685.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
 gi|228251066|gb|EEK10237.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
          Length = 284

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 20/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
            K F +  L   ++  T+          +  A  + +IKK G L+  +      F  V  
Sbjct: 5   KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G+D++    L+  +   P   +Y+ ++A  R   L S ++DI   N   T  R+ 
Sbjct: 65  KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I  V +L G ++ V  GTT E      F+ +     
Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +++  +   A    R DA++ D + + A     +     V +  + +   +APA+ +
Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGNPDTIAPAVQK 233

Query: 233 GDTEWYNIVSW 243
           G+ E  + ++ 
Sbjct: 234 GNKELLDFINK 244


>gi|332111811|gb|EGJ11791.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 295

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 7/240 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDP 75
            +  A  L  IK+ G +  G+     G +    +G + G+ +D C+ +       +    
Sbjct: 15  GAVQADTLSKIKETGTVTMGVRESS-GLSYTLGDGKFVGYHIDVCQKVLSDIRKKLGLSS 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+Y P+ ++ R   +Q+  +DI   +T   + R+  +   F   T+ +     +    
Sbjct: 74  LTIKYQPVTSQNRIPLVQNGTVDIECGSTTNNVARQKDVA--FAVTTFVEEVRIAVKADS 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI+S++QL G ++    GTT+  TL  + +A+ + +  +  +   +      + R DA+ 
Sbjct: 132 GINSIAQLVGKTVATTTGTTSVQTLRKHERANGVDFKEVYGKDHADSFLLLESGRADAFV 191

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S L     T+  P+   I+ +++S  P+A  + + D  +   V  +  A + + +L 
Sbjct: 192 MDGSILAKNIATSKNPAGFKIVGEVLSVEPIAIMLRKDDAAFKAAVDESIKAQIKSGDLA 251


>gi|238791651|ref|ZP_04635289.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           intermedia ATCC 29909]
 gi|238729267|gb|EEQ20783.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           intermedia ATCC 29909]
          Length = 309

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 80/225 (35%), Gaps = 6/225 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80
             L  IK  G +  G     V F+         G+  D       A+   +     +++ 
Sbjct: 38  DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSNLIIDAVKKKLNAPDLQVKL 97

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+   D    +T   L R      AF    +  G   +  K   +   
Sbjct: 98  IPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSDVKDF 155

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D + 
Sbjct: 156 KDLAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L   +    +P +  I+    S+      + + D  +  ++  T 
Sbjct: 216 LAGERAKAKKPDQWDIVGKPQSQEAYGCMLRKNDPAFKALLDETI 260


>gi|330957762|gb|EGH58022.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 304

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 84/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D       A+   +   
Sbjct: 23  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLGMP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 83  ELKVKYNLVTSQTRIPLVQNGTVDLECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKX 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKSMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L   K    +P +  +     S       + +GD  +   V     A   + ++
Sbjct: 201 MMDDALLAGEKAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|322373492|ref|ZP_08048028.1| CjaA protein [Streptococcus sp. C150]
 gi|321278534|gb|EFX55603.1| CjaA protein [Streptococcus sp. C150]
          Length = 284

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 20/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
            K F +  L   ++  T+          +  A  + +IKK G L+  +      F  V +
Sbjct: 5   KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIAEIKKSGELRIAVFADKKPFGYVDS 64

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G+D++    L+  +   P   +Y+ ++A  R   L S ++DI   N   T  R+ 
Sbjct: 65  KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I  V +L G ++ V  GTT E      F+ +     
Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +++  +   A    R DA++ D + + A     +     V +  + +   +APA+ +
Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGAPDTIAPAVQK 233

Query: 233 GDTEWYNIVSW 243
           G+ E  + ++ 
Sbjct: 234 GNKELLDFINK 244


>gi|315452691|ref|YP_004072961.1| amino-acid(glutamine) ABC transporter, periplasmic
           glutamine-binding protein [Helicobacter felis ATCC
           49179]
 gi|315131743|emb|CBY82371.1| amino-acid(Glutamine) ABC transporter, periplasmic
           glutamine-binding protein [Helicobacter felis ATCC
           49179]
          Length = 276

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 14/245 (5%)

Query: 4   DFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
                 L ++ L           +  S L  IK+RG LK G+ +    F  + + G+++G
Sbjct: 6   RVLGIFLVVLGLGLAGCGDHKNQSKESGLASIKQRGVLKVGVFSDKPPFGYMDSKGEYQG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV   + ++  +  D  KI+++P+ A  R   L+S ++DI+  N   T  RE    + F
Sbjct: 66  FDVYIAKRMAKDLLGDEKKIEFIPVEAAARVEFLKSNKVDIIMANFTKTKEREAV--VDF 123

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    G    K   + S+  L    + V  GTT +      F  +      + +++
Sbjct: 124 AKPYMKVALGVAS-KNGEVKSIEDLKDKPLIVNKGTTADFY----FSKNYPNISLLKYDQ 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A + +R  A   D + L+A       P   V +P +  +  +APA+ +G+    
Sbjct: 179 NTETFLALKDNRGPALAHDNTLLFAW--VKKNPEFKVGIPSLGDQDVIAPAVKKGNKALL 236

Query: 239 NIVSW 243
             ++ 
Sbjct: 237 EWLNK 241


>gi|330811359|ref|YP_004355821.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379467|gb|AEA70817.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 304

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D    +  A+  D    
Sbjct: 23  AAELTGTLKKIKESGVVTLGHRDASIPFSYIADASGKPVGYSHDIQMKVVEALKKDLDLP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 83  NLQVKYNLVTSQTRIPLVQNGTVDLECGSTTNNVER--QQQVDFSVGIFEIGTKLLSKKD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 141 SKYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +  +  +     S       + +GD  +   V     A   + E+
Sbjct: 201 MMDDALLAGEAAKAKKADDWAVTGTPQSYEIYGCMMRKGDEPFKKAVDDAIKATYASGEI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|227551336|ref|ZP_03981385.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium TX1330]
 gi|257896044|ref|ZP_05675697.1| extracellular solute-binding protein [Enterococcus faecium Com12]
 gi|293378784|ref|ZP_06624941.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium PC4.1]
 gi|227179547|gb|EEI60519.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium TX1330]
 gi|257832609|gb|EEV59030.1| extracellular solute-binding protein [Enterococcus faecium Com12]
 gi|292642577|gb|EFF60730.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium PC4.1]
          Length = 271

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56
            K   + +L +  L           N  IL   K    +  G+      F  +   +   
Sbjct: 5   KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDVD  +A++  I  +  K +++ + +K R   L++  ID +      T  R+    +
Sbjct: 65  QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175
            F  + +  GQ  ++ K   I SV  L+ ++      G+T+   +  +    N     + 
Sbjct: 123 DFSDVYFDAGQALLVKKGSRIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E   E   A ++ + DA T D + L  +   ++ P E+ ++    +  P   AI +G  
Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235

Query: 236 EWYNIVSWTH 245
            +   V+   
Sbjct: 236 NFLKAVNQAL 245


>gi|16329306|ref|NP_440034.1| hypothetical protein sll0224 [Synechocystis sp. PCC 6803]
 gi|1651787|dbj|BAA16714.1| sll0224 [Synechocystis sp. PCC 6803]
          Length = 298

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 10/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++  L+    +  S    +L  I++ G +  G     V FA V   G+W GF 
Sbjct: 1   MKKFACLALSVLLSGAASLPSWAGEVLDRIEQTGVINAGTRKDAVPFAYVDDQGEWVGFS 60

Query: 61  VDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           +D    +   + A    P K+  +   A  RF  + ++ ID+   ++ +T  R     + 
Sbjct: 61  IDLLELIRQEAEARLGKPIKLNMVEATADNRFDLITNQTIDLECASSTFTWNRTAV--VD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    + DG   I      + S   L+G +I V   TT    + D+          +  +
Sbjct: 119 FSVSYFADGTKIITGVDSDLESADSLAGRAIGVIPDTTNAKAILDF----QPGATIVEVK 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236
              +  A   A   +A+ GD   L  LK T+D P +  ++P+        A  + + D++
Sbjct: 175 DQADGMAKLEAGEIEAFAGDGIVLAGLKKTSDNPQQWKVVPNFPYQYEAYACLLPKDDSD 234

Query: 237 WYNIVSWTH 245
           W N+V+++ 
Sbjct: 235 WRNLVNYSL 243


>gi|271502694|ref|YP_003335720.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270346249|gb|ACZ79014.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 278

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/328 (19%), Positives = 111/328 (33%), Gaps = 66/328 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L   ++   + +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKPLLAFSLLAGLVSL-AGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  +A+ +A+      ++    N   R   L SK++D+++ N   T  R     + F 
Sbjct: 60  DVDVAQAIGNALGVK---VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   L    I    GT  E+TL +++         I ++  
Sbjct: 115 VPYFATGQKFIARKG-VLKTPDDLKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN--DRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L       + ++  I P  I+K      + +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLAPAQKADFEISPFSITKEYQGIGLPKGEDRL 229

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              V+                                  L ++K  +             
Sbjct: 230 TQKVNDI-------------------------------LLNLEKQGD------------- 245

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
             ++       +++R  G Q+    PRG
Sbjct: 246 -AVK-------IYNRWFGPQTPSAQPRG 265


>gi|257869447|ref|ZP_05649100.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
 gi|257803611|gb|EEV32433.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
          Length = 269

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 95/255 (37%), Gaps = 16/255 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54
           M K     +L +  L   S      +    +L   K+   +  G+      F  +  A  
Sbjct: 1   MSKKISTVLLLVFALMTFSACKGQSAAERDVLASSKESNQIIWGVKNDTRLFGLMDIATA 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +GFD+D  +A++  I        ++ + +K R   L++  ID +      T  R+   
Sbjct: 61  EVRGFDIDIAKAITEHILGRDGSAIFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F  + +  GQ  ++ K   I  +  L+   ++ V  G+T+ + +             
Sbjct: 119 QVDFSDVYFDAGQSLLVAKDSPIQGIEDLNANTTVLVVKGSTSAINIRKAAPEAK----I 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  E   E   A ++ + DA T D + L  +   N     + ++    +  P   AI +G
Sbjct: 175 LELENYAEAFTALQSGQGDAMTTDNAILLGMASENPN---YHLVGGTFTNEPYGIAIDKG 231

Query: 234 DTEWYNIVSWTHYAM 248
              +   V+     M
Sbjct: 232 QEPFLKAVNQALKEM 246


>gi|325526439|gb|EGD04023.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. TJI49]
          Length = 301

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79
           +  L  I++   +  G     V F+ V A+G   GF  D C  + +A+         +++
Sbjct: 29  SGTLEKIRQNNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++P+ ++ R   +Q+  +D+    T     R   +   F    +      +   + GI  
Sbjct: 89  FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTQSGIRD 146

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G ++    GTT+E  L    +   M    I  +   E      + R  AY  D  
Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEDKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 206

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L  ++    +P++  I+    S       + + D ++  +V      ++   E+ 
Sbjct: 207 LLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKRGEID 262


>gi|224825939|ref|ZP_03699043.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224602163|gb|EEG08342.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 297

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 7/259 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K    + L    L  T  +  AS L  +     +        V F+ +  +    GF
Sbjct: 1   MKTKKLMTTALIATGLACTLPAVAASTLEKVAASNKITVSYREAAVPFSYLPGSDKAVGF 60

Query: 60  DVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            VD   A+       +     ++  +P+ ++ R   L     D+   +T     R   + 
Sbjct: 61  SVDLTNAIVDDVRKKLKKPNLEVAAIPVTSQNRIPLLVDGTYDLECGSTTNNAARGKDVA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    ++ G   +  K   I+S + L+  ++   AG+T E  +  Y   +++    ++
Sbjct: 121 --FAISHFYAGTRLLAKKTAHITSYADLAKKTVASTAGSTNEKVIRQYSADNHLDMQFVL 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +        +  A   D   L+ LK     P    ++ D +   P    + + D 
Sbjct: 179 GKDYGDALQLVENDQAVALALDDILLFGLKANAKNPDSLEVVGDALQVEPYGCMLRKDDP 238

Query: 236 EWYNIVSWTHYAMVTAEEL 254
           E+  +V  T   ++ + E 
Sbjct: 239 EFKALVDGTLARLMKSGEF 257


>gi|325121936|gb|ADY81459.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 297

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +S + L  +  TS    A  L  IK  G +  G        + V A G   
Sbjct: 1   MKRSATSLIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L +  ID+    T  +  R+  
Sbjct: 60  GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K   +    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P    I+  ++S  P    + + 
Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237

Query: 234 DTEWYNIVSWTHY 246
           D ++  I   T  
Sbjct: 238 DPKFKAIADRTVN 250


>gi|329122022|ref|ZP_08250631.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Dialister micraerophilus DSM 19965]
 gi|327467074|gb|EGF12586.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Dialister micraerophilus DSM 19965]
          Length = 265

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 7/238 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                 ++++     +K   +  G++           NG+  GFDVD  +A+S  I  + 
Sbjct: 20  LVAGCGSDSAKNDSTQKPKKIIAGLDDTFAPMGFRDENGNIVGFDVDIAKAVSKEIGVE- 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I++ P++   +   L S +ID +      T  RE    + F      + Q +++    
Sbjct: 79  --IEFKPIDWASKESELNSGRIDCIWNGLSITPEREE--KMDFTNPYMNNDQIYVVMDNS 134

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S S L G  IC Q G+T +L L       +       +           A+R DA  
Sbjct: 135 DIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGEIKTYPDFTSCFLDLDANRADAVL 194

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            D     A       P ++  LP+ +S  P A  + +G+ E   +++     +  + E
Sbjct: 195 VDGIL--ADYYMTKSPGKYRRLPEKLSTEPFAIGVKKGNEEIVKMLNEGIEKVKASGE 250


>gi|318604771|emb|CBY26269.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 304

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 9/251 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77
            +   L  IK  G +  G     V F+         G+  D+   +  AI         +
Sbjct: 30  ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ ++ R   LQ+   D    +T   L R      AF    +  G   +  K   +
Sbjct: 90  VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
               +L+G  + V +GTT+E+ L    +   M    I  +   +      + R  A+  D
Sbjct: 148 KDFKELAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            + L   +    +P +  I+    S+      + + D  +  ++  T     TA+  G+ 
Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDETI---ATAQTSGVA 264

Query: 258 QKNINQVSKDT 268
           +K+ ++  K+ 
Sbjct: 265 EKSFDRWFKNP 275


>gi|312621847|ref|YP_004023460.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202314|gb|ADQ45641.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 266

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 86/234 (36%), Gaps = 9/234 (3%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
            +    S   N + L  IKK      G++           N +  GFDVD    ++  + 
Sbjct: 18  FLSGCASNDQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNNTVGFDVDLANEIAKKLG 77

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +K++ + ++      AL+SK+ D +      T  R+ +  L       +  Q   + 
Sbjct: 78  ---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFNL--AGPYLYIRQVIAVK 132

Query: 133 K-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I +   L G  I VQA TT +  +    K  N +     +ER+ +        R 
Sbjct: 133 KGDSSIKNFEDLKGIKIGVQANTTGDNAVQKM-KFINYEKDVTRYERITDAFNDLDIGRI 191

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A   D   + A       P +  I P  + + P+  A+ + D + YN +    
Sbjct: 192 KAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKEDKDLYNEIQKIL 243


>gi|307152951|ref|YP_003888335.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
 gi|306983179|gb|ADN15060.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
          Length = 298

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           MYK   ++ + L++   +   + A  +L  I++ G +  G     + F  V   G W G+
Sbjct: 1   MYKQLAITAITLLLTITSQTPSLAGRVLDKIRQTGVITAGARKDAIPFGYVNEKGQWVGY 60

Query: 60  DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D     R  +      P K+Q + +  + RF  ++ + IDI   +T  T  R+    +
Sbjct: 61  SLDILELIRQQTEKQLGKPIKLQLVEVTPENRFAKIKDQSIDIECGSTTVTWARDK--EV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ K   + ++  L+G  I V   TT E  +     A       +  
Sbjct: 119 DFSVSYFASGTQLLVKKGSNLGTIESLAGMKIGVIPNTTNERAIKLQQPAA----QLVTV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E          D +  D   L  LK T    +   I+P+        A  I Q ++
Sbjct: 175 KDRFEGLQKLEKGEIDGFASDGIVLQGLKRTVKNGNSLEIVPEYPYMYESYACVIPQDES 234

Query: 236 EWYNIVSWTH 245
           +W ++V+++ 
Sbjct: 235 QWRDLVNYSL 244


>gi|220904827|ref|YP_002480139.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219869126|gb|ACL49461.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 302

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 85/235 (36%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80
             L  IK+ G +  G     V F+      +  G+  D+   +  A+         K+++
Sbjct: 31  GTLKKIKETGVITVGHRESSVPFSYYDLQQNVIGYSQDYSNKIVDAVKKQLNMPNLKVRF 90

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+   D    +T      +    + F    +  G   + HK  GI   
Sbjct: 91  VPITSQNRIPLLQNGTYDFECGSTTNNA--DRQQQVDFSNTLFIVGTRLLTHKDSGIKDF 148

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++ V AGTT+E+ L        +    I  +   +      + R  A+  D + 
Sbjct: 149 DDLKGKNVAVTAGTTSEMLLNKMNDEKKLGISIISTKDHGDSFRTVESGRAVAFFIDDAL 208

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L   +    +P+E VI+    S       + +GD  +  +       +    E  
Sbjct: 209 LAGERAKAKKPAEWVIVGTPQSFEAYGCMLRKGDAAFKKLADDAIAELQLNGEAE 263


>gi|209516854|ref|ZP_03265704.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209502670|gb|EEA02676.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 272

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 94/247 (38%), Gaps = 11/247 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
           K  FV    + +L   S   +A  L DIKK G L+         F  V        G DV
Sbjct: 2   KIKFVGAAVMGLLLAFSGVAHADRLDDIKKAGVLRVATFDSNAPFGFVDPKTNQIVGLDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D+ RA+++ +      ++  P N   R   L+S ++D++  N   T  R     + F   
Sbjct: 62  DYARAVANKLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDERRK--EVDFSTP 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G  FI  K   + S  QL+   +    GTT E  +   F         + ++    
Sbjct: 117 YFASGTQFIAKKG-VLKSAQQLNNLRVGADKGTTNEQQVRAQFP----NATIVAYDDTPF 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA RA    A T D   L AL       + + I P  IS       + +G+T   N+V
Sbjct: 172 AFAALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVV 231

Query: 242 SWTHYAM 248
             T   +
Sbjct: 232 DDTLKGL 238


>gi|238795397|ref|ZP_04638912.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           mollaretii ATCC 43969]
 gi|238720516|gb|EEQ12317.1| Glutamate/aspartate periplasmic-binding protein [Yersinia
           mollaretii ATCC 43969]
          Length = 309

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 93/248 (37%), Gaps = 9/248 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80
             L  IK  G +  G     V F+         G+  D       A+   +     +++ 
Sbjct: 38  DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKL 97

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+   D    +T   L R      +F    +  G   +  K   +   
Sbjct: 98  IPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQASFSNTIFVVGTRLLTKKGSEVKDF 155

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++ V +GTT+E+ L    +  N+    I  +   +      + R  A+  D + 
Sbjct: 156 KDLAGKTVVVTSGTTSEVLLNKLNEKDNLNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   +    +P +  I+    S+      + + D  +  ++  T     TA+  G+ +K+
Sbjct: 216 LAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDETI---ATAQTSGVAEKS 272

Query: 261 INQVSKDT 268
            ++  K+ 
Sbjct: 273 FDRWFKNP 280


>gi|82880397|gb|ABB92744.1| glutamate sensor protein FLIPE-600n [synthetic construct]
          Length = 764

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 6/233 (2%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLP 82
           L  I K G +  G     V F+         G+  D+  A+  A+         +++ +P
Sbjct: 250 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 309

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I   + 
Sbjct: 310 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFAN 367

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D + L 
Sbjct: 368 LKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 427

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 428 GERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 480


>gi|82880399|gb|ABB92745.1| surface displayed FLIPE 600n sensor protein [synthetic construct]
          Length = 865

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 6/233 (2%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLP 82
           L  I K G +  G     V F+         G+  D+  A+  A+         +++ +P
Sbjct: 289 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 348

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I   + 
Sbjct: 349 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFAN 406

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L   ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D + L 
Sbjct: 407 LKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 466

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 467 GERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 519


>gi|330969980|gb|EGH70046.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 262

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 8/231 (3%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   + S ++S L  IK R  L  G+ +    F  V   G + GFD D  +  +  +  D
Sbjct: 1   MAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 60

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++++ +    R   LQS ++D++  N   T  R     + F           ++ + 
Sbjct: 61  EKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTHPNLRVAVQALVPQA 118

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + ++  L+  +  V  GTT ++ L      ++  +  + FE+  E   A    R DAY
Sbjct: 119 SPVKTLDDLASKTTIVTTGTTADIWLT----KNHPDWKVLKFEKNSESLQALANGRGDAY 174

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D   L++       P   V+   +  ++P+APA+ +G+ E  + V+   
Sbjct: 175 AQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPAVKKGNIELRDWVNTEL 223


>gi|329121399|ref|ZP_08250024.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Dialister micraerophilus DSM 19965]
 gi|327469689|gb|EGF15156.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Dialister micraerophilus DSM 19965]
          Length = 281

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 21/253 (8%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50
           M K   F ++I+ ++ L F S   + S         + +IKK G L  G+ +    F  +
Sbjct: 1   MKKFTTFLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYI 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             NG+++G+D+ F   L+  +   P   +Y+ L    R    ++ ++DI+  N   T  R
Sbjct: 61  DKNGNYRGYDIYFAERLAKDLGVKP---KYISLEPANRTEYAKTGKVDIILANFTVTKER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                + F         G +  K + I+SV QL G  + V  GTT E      F  ++ +
Sbjct: 118 AE--QVDFALPYMKVAIGVVSPKNQNITSVEQLKGKKLIVAKGTTAETY----FTENHPE 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              + F++  E  +A    R DA++ D + + A  +    P   V +  +     +APA+
Sbjct: 172 IELLKFDQYAETYSALLDKRGDAFSTDNTEVLAWAM--KNPEYKVGITHLGKDEVIAPAV 229

Query: 231 IQGDTEWYNIVSW 243
            +G+ E  + ++ 
Sbjct: 230 QKGNKELLDYINN 242


>gi|227888779|ref|ZP_04006584.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus johnsonii ATCC 33200]
 gi|227850616|gb|EEJ60702.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus johnsonii ATCC 33200]
          Length = 263

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 10/260 (3%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       + I+ L  +         +    IK RG L  G++   V     + NG  
Sbjct: 1   MMKKIIRFLSLLIIVLASVGVAGCQGQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  +A+   I   P    +  ++   +   L++  I+++      T  R     +
Sbjct: 61  VGFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTINVIWNGYTKTKARAK--KV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIV 175
           AF      + Q  +  K +GI++  Q+    + VQ G++    L +Y K    +    ++
Sbjct: 116 AFSKPYLENDQILVTRKNEGINNYRQMRWKILGVQTGSSGADDLDNYPKVLKKRVKSTVL 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++         +A R D    D          +    E             +  I + D 
Sbjct: 176 YDTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDK 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              N ++     +    EL 
Sbjct: 236 TLKNKINQALDHLEKTGELK 255


>gi|261823780|ref|YP_003261886.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261607793|gb|ACX90279.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 278

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L L  L   S +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKQILTVAL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L S+++D+++ N   T  R     + F 
Sbjct: 60  DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 115 LPYFATGQKFIARKG-VLKTPDDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          E  I P  I+K      I +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229

Query: 238 YNIVSWTH 245
              ++ T 
Sbjct: 230 TAKINDTL 237


>gi|226304964|ref|YP_002764922.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis
           PR4]
 gi|226184079|dbj|BAH32183.1| putative ABC transporter substrate-binding protein [Rhodococcus
           erythropolis PR4]
          Length = 334

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 88/229 (38%), Gaps = 10/229 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
            S       L  I+ RG L  G++TG    +      G  +GFDVD  R ++  +  DP 
Sbjct: 82  ASPQPPTPSLDAIRARGRLIVGLDTGSNLMSFRDPATGRLEGFDVDIAREIARDLLGDPE 141

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           KI+Y  L + +R  ALQ   +D++ +    T  R     + F    +   Q   + +   
Sbjct: 142 KIEYRILTSDDRIAALQESMVDVVVKTMTITCER--REKVDFSTQYFSAEQRIQVLQGSP 199

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +  ++ L+G  +C   GTT+   + +           +      +     +  + DA + 
Sbjct: 200 VRGIADLAGKRVCAARGTTSATRIQELQPEA----TVVTVPMWSDCLVVLQQGQVDAIST 255

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D + L  L   +      +++   +   P    + + + +    V+ T 
Sbjct: 256 DDTILAGLASQDP---YLMMVGGSLGVEPYGIGVNKDNPDLVRFVNGTL 301


>gi|330429005|gb|AEC20339.1| family 3 extracellular solute-binding protein [Pusillimonas sp.
           T7-7]
          Length = 299

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 95/236 (40%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79
           A+ L  +++ G    G     + F  +  N    GF  +  + ++  + +    D  +++
Sbjct: 27  ATTLKKVEQTGTFTVGTRAASIPFNYLDDNNQQSGFAWEITQRVADKVKETVARDDIQVR 86

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            + +  + R   + ++ +D+   +T     RE    ++F    +  G   +      I +
Sbjct: 87  PMEVTPQTRIPLVANQTVDLECSSTTHN--RERENQVSFSTSFFIVGTRMLTLANSPIKN 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G ++ V AGTT E  L        ++ + I+ + ++         R DA   D  
Sbjct: 145 WEDLAGKNVVVSAGTTAERLLRKVNDEKKLRVNIILSKDIDNTFMTVDTGRADAAMMDDM 204

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            LY+L   +  P +  ++ +++        + + DTE+  +V      M+ + E+ 
Sbjct: 205 VLYSLIARSPDPKKWKVVGEVLQPEAYGCMLRKDDTEFKELVDNVITGMMNSGEMA 260


>gi|115351568|ref|YP_773407.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115281556|gb|ABI87073.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 271

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 92/249 (36%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L    L       +A  L DI+K G L+         F  V A      G 
Sbjct: 1   MKIHTLATWLVGAALVTAGTVAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  +    GTT E+TL + +         + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 231 FVNDTLKGL 239


>gi|116492193|ref|YP_803928.1| amino acid ABC transporter periplasmic protein [Pediococcus
           pentosaceus ATCC 25745]
 gi|116102343|gb|ABJ67486.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 278

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 94/267 (35%), Gaps = 21/267 (7%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K       +  L   ++  +S                +K   +  G+      F  + 
Sbjct: 1   MRKILKSVALIFTLMASLVLLSSCGAKGEVKNIDAWDQAQKTDSITWGVKADTKLFGLMD 60

Query: 52  -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +   KGFD+D  +AL+  +    +K  ++ + ++ R   L++  +D +      T  R
Sbjct: 61  VKDSQIKGFDIDIAKALTKQMLGKKAKANFIQVTSQTRIPLLKNGNLDAIIATMTITKER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHN 168
           E    + F    +  GQ  ++ K   I SV  L   G  +    G+ +   +  +     
Sbjct: 121 EKV--VDFSNSYFDAGQSLLVKKGSSIKSVKDLNKPGTKVIGVVGSNSVENIKKFAPKA- 177

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                I  +   +   A ++ +  A T D   L+ + + N     + ++    +K P   
Sbjct: 178 ---QVIQLQDYAQALTALKSGQGAALTTDNGILFGMAVDNPN---YQVVGKAFTKEPYGI 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
           AI +G  +    ++     +  + E  
Sbjct: 232 AINKGQGQLKKHLNQALKELEESGEYN 258


>gi|313891392|ref|ZP_07825008.1| ABC transporter, substrate-binding protein, family 3 [Dialister
           microaerophilus UPII 345-E]
 gi|313120167|gb|EFR43343.1| ABC transporter, substrate-binding protein, family 3 [Dialister
           microaerophilus UPII 345-E]
          Length = 281

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 21/253 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50
           M K   F ++I+ ++ L F S   + S         + +IKK G L  G+ +    F  +
Sbjct: 1   MKKITMFLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYI 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             NG+++G+D+ F   L+  +   P   +Y+ L    R    ++ ++DI+  N   T  R
Sbjct: 61  DKNGNYRGYDIYFAERLAKDLGVKP---KYISLEPANRTEYAKTGKVDIILANFTMTKER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                + F         G +  K + I+SV QL G  + V  GTT E      F  ++ +
Sbjct: 118 AE--QVDFALPYMKVAIGVVSPKNQNITSVEQLKGKKLIVAKGTTAETY----FTENHPE 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              + F++  E   A    R DA++ D + + A  +    P   V +  +     +APA+
Sbjct: 172 IELLKFDQYSETYNALLDKRGDAFSTDNTEVLAWAM--KNPEYKVGITHLGKDEVIAPAV 229

Query: 231 IQGDTEWYNIVSW 243
            +G+ E  + ++ 
Sbjct: 230 QKGNKELLDYINN 242


>gi|242241397|ref|YP_002989578.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242133454|gb|ACS87756.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 278

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 111/328 (33%), Gaps = 66/328 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F ++  L  L F S +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKQVF-ALTLLAGLVFLSGAAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L SK++D++S N   T  R     + F 
Sbjct: 60  DVDVAEAIGKALGVK---VELRATNPANRIPLLTSKKVDLISANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL ++F +       I ++  
Sbjct: 115 IPYFATGQKFIARKG-ALKTPDDIKTLRIGADKGTVQEITLREHFPSAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L        +    I P  I+K      + +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLPADQKAGFEISPFSITKEYQGIGVPKGEDRL 229

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              ++                                  L ++K  +             
Sbjct: 230 TQKINEV-------------------------------LLNLEKQGD------------- 245

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
             ++       +++R  G  ++   PRG
Sbjct: 246 -AVK-------IYNRWFGPDTKSAQPRG 265


>gi|91787876|ref|YP_548828.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91697101|gb|ABE43930.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 294

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 97/258 (37%), Gaps = 8/258 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F   +  +++    + + +A  L  +     +        V F+ +  +    GF 
Sbjct: 1   MK--FSTLMTAVLLTAGLAATASAQTLKKVADSNKITVSYREASVPFSYLIGSTKAVGFS 58

Query: 61  VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           V+   A+       +     ++ Y+P+ ++ R   L +   D+   +T     R   +  
Sbjct: 59  VELTEAIIDDVRKKVKKPNLEVAYMPVTSQNRIPLLVNGTYDLECGSTTNNSARGKDVA- 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   +  K  G+ + + L+  ++    GTT    +  Y    N+    I+ 
Sbjct: 118 -FSINMFYTGTRLLTKKTSGVKNYADLTKKTVASTTGTTNAQVIRKYNTEKNLDMQLILG 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  ++      + R  A+  D   L+ L   +  P+   ++ D +   P A  + + D E
Sbjct: 177 KDHDDSLLLVESDRAMAFAMDDILLFGLMANSKNPAALQVVGDSLQVEPYACMLRKDDPE 236

Query: 237 WYNIVSWTHYAMVTAEEL 254
           +  +V  T   ++ + E 
Sbjct: 237 FKKLVDGTITRLMKSGEF 254


>gi|83717385|ref|YP_438424.1| glutamate/aspartate ABC transporter periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
 gi|257141466|ref|ZP_05589728.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
 gi|83651210|gb|ABC35274.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
          Length = 299

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +         +  L  I+    +  G+    V F+         G
Sbjct: 2   MKPFRPLLSIAVGCALAAAAHAEDASPTLKKIRDTSVVTLGVRESSVPFSYYDQRQQTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I  +       ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I  K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI             + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|160901104|ref|YP_001566686.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160366688|gb|ABX38301.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 299

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 8/255 (3%)

Query: 4   DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKG 58
            F ++ + +  +   + +      A  L  I+  G +  G+       A        + G
Sbjct: 2   RFVLAHVAMACVVAATGAAHAQEAAGTLDKIQSTGKVVMGVRESSAPMAYAFGTTQKYVG 61

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           + V+ C  + + I     KI+Y+ L ++     +Q+  +DI    T   L R+  +   F
Sbjct: 62  YHVELCEKVLAQIVPKA-KIEYMALTSQNTMPLVQNGTVDIGCGPTTNNLARQKQVA--F 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              TY       +    GI+S  QL G  +   AGTT    L  Y + + +     + + 
Sbjct: 119 AVTTYVSQVRMAVRADSGITSFKQLDGKPVAASAGTTAVQLLRKYGRDNGVNLPTSLGKD 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R DA+  D + L  +   +  P+   I+ +++   P+A    + D  + 
Sbjct: 179 HFESFLMLESGRADAFVLDDNLLAGVIANSKNPAGFKIVGEVLGSEPIAILFRRDDPAFK 238

Query: 239 NIVSWTHYAMVTAEE 253
             V      M+ + E
Sbjct: 239 KAVDDVLVGMMASGE 253


>gi|77456456|ref|YP_345961.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77380459|gb|ABA71972.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 292

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 26/262 (9%)

Query: 1   MY--KDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGL 44
           M   K  F   L  + L                   +  A  L  IK R  L  G+ T  
Sbjct: 1   MKTAKALFALPLISLALLAGCNKTEEPAKPKVASESTAPAGYLDKIKARDKLIVGVFTDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V   G + GFD D  R  +  +  D +K++++ +    R   LQS ++D++  N 
Sbjct: 61  PPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANM 120

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F           ++ +   +  +  L+  +  V  GTT ++ L    
Sbjct: 121 TVTPERKE--AVEFTNPNLKVAVQALVPQGSEVKKLDDLATRTTIVTTGTTADIWLT--- 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
             ++  +  + FE+  E   A    R DAY  D   L++    N     + +L + +   
Sbjct: 176 -KNHPDWKLLKFEKNSESLQALANGRGDAYAQDNLVLFSWAKQNPG---YRVLDEKLGAE 231

Query: 225 -PLAPAIIQGDTEWYNIVSWTH 245
            P+APA+ +G+ E  + V+   
Sbjct: 232 APIAPAVKKGNIELRDWVNAEL 253


>gi|229493071|ref|ZP_04386866.1| bacterial extracellular solute-binding protein, family 3
           [Rhodococcus erythropolis SK121]
 gi|229320101|gb|EEN85927.1| bacterial extracellular solute-binding protein, family 3
           [Rhodococcus erythropolis SK121]
          Length = 328

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 86/229 (37%), Gaps = 10/229 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
            S       L  I+ RG L  G++TG    +      G  +GFDVD  R ++  +  DP 
Sbjct: 76  ASPQPPTPSLDAIRARGRLIVGLDTGSNLMSFRDPATGRLEGFDVDIAREIARDLLGDPE 135

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           KI+Y  L + +R  ALQ   +D++ +    T  R     + F    +   Q   + +   
Sbjct: 136 KIEYRILTSDDRIAALQESMVDVVVKTMTITCER--REKVDFSTQYFSAEQRIQVLQGSS 193

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +  +  L+G  +C   GTT+   +             +      +     +  + DA + 
Sbjct: 194 VRGIDDLAGKRVCAARGTTSATRIQQLQPEA----TVVTVPMWSDCLVVLQQGQVDAIST 249

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D + L  L   +      +++   +   P    + + + +    V+ T 
Sbjct: 250 DDTILAGLASQDP---YLMMVGGSLGVEPYGIGVNKDNPDLVRFVNGTL 295


>gi|188591216|ref|YP_001795816.1| glutamate/aspartate transporter; ABC superfamily, periplasmic
           binding component [Cupriavidus taiwanensis LMG 19424]
 gi|170938110|emb|CAP63096.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic
           binding component [Cupriavidus taiwanensis LMG 19424]
          Length = 299

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 93/252 (36%), Gaps = 8/252 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                ++   ++  T+ +       L  IK  G +  G+    + F          G+  
Sbjct: 5   KLAALMIAGGVMCGTAQAAEQLTGTLKKIKDTGVITLGVRESSIPFNYNLGGVRQVGYSY 64

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     +++ +P+ ++ R   LQ+  IDI   +T   L R+  +   
Sbjct: 65  DINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQVA-- 122

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + I  +
Sbjct: 123 FTNSIFIIGTRIMVKKDAGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTK 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R  A+  D + LY  +     P++ +++    S+      I + D ++
Sbjct: 183 DHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSRESYGCMIRKDDPQF 242

Query: 238 YNIVSWTHYAMV 249
             +       M+
Sbjct: 243 KKLSDTVISGMM 254


>gi|76574838|gb|ABA47312.1| probable binding protein component of ABC transporter [Pseudomonas
           cichorii]
          Length = 268

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 102/278 (36%), Gaps = 17/278 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K   ++ +  + L   S   +A  L DIKK G L+         F  V A     +G 
Sbjct: 1   MKK---LTAITALSLAVLSGLAHADRLEDIKKSGVLRVAAFDSNPPFGFVDAKSKQIEGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +A++  +      +Q  P N   R   L + ++D++  N   T  R     + F 
Sbjct: 58  DVDYAKAIADKLGVK---LQLQPTNPANRVPLLMANKVDLVLANFTITPERAE--QVNFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   + +   L+   + V  GT  E  L + F         I ++  
Sbjct: 113 IPYFSSGQQFIVKKG-TLKNQDDLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R     A T D   L  L        ++ + P  IS   +   I +G+T    
Sbjct: 168 PFAFTALRNGNVQAITQDGPKLIGLLANVPDKDKYEVPPFTISNDLIGVGIPKGETALTE 227

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
            V+ T    V  E  G  QK  +      T   + R  
Sbjct: 228 FVNQTL---VELESKGQAQKIYDTWFGPNTPTPLARLF 262


>gi|330950012|gb|EGH50272.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae Cit 7]
          Length = 304

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS-- 76
            +     L  IK+ G +  G     + F+ +  A+G   G+  D    +  AI  D    
Sbjct: 23  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMP 82

Query: 77  --KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 83  DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P +  +     S       + +GD  +   V     A   + ++
Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|238758025|ref|ZP_04619206.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae
           ATCC 35236]
 gi|238703779|gb|EEP96315.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae
           ATCC 35236]
          Length = 309

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 83/227 (36%), Gaps = 6/227 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78
           ++  L  IK  G +  G     V F+         G+  D+   +  A+         ++
Sbjct: 36  SSDTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNVIVEAVKKKLNAPDLQV 95

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + +P+ ++ R   LQ+   D    +T   L R      AF    +  G   +  K   + 
Sbjct: 96  KLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGTEVK 153

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D 
Sbjct: 154 DFKDLAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAVAFMMDD 213

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + L   +    +P +  I+    S+      + + D  +  ++  T 
Sbjct: 214 ALLAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKTLMDETI 260


>gi|327474725|gb|EGF20130.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK408]
 gi|327490282|gb|EGF22070.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1058]
          Length = 270

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 100/259 (38%), Gaps = 14/259 (5%)

Query: 17  FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
                 ++S    + DI+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AAPAQADSSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I  V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKIKDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +    D+T+ 
Sbjct: 252 SLQKLYDKYDLKPSDSTDD 270


>gi|326792530|ref|YP_004310351.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
           5427]
 gi|326543294|gb|ADZ85153.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium
           lentocellum DSM 5427]
          Length = 260

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   +  L L  +F      ++  +    +K++  L   +      F  +  +G+  G
Sbjct: 1   MLKKILLLGLSLCTMFSFVGCTNSTQTTYEKVKEKKELTFAMTGQYPPFNYIDESGELVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A++  +           +  +     L  K+ D++  +   T  R     ++F
Sbjct: 61  FDIDIANAIADKMGVTAKP---ETIAWEGIITGLTGKRFDMIIGSMAITEER--LEKVSF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y+DG    + +   I+ ++ L+ A + V  GTT    L++    +      + FE 
Sbjct: 116 SNPYYYDGAQLFVMQDSDIADINDLTNAKVGVVTGTTFHSYLSE----NYPNLEILQFES 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +   A +  R DA          L   +       +   ++    +  AI + D E  
Sbjct: 172 DVDNLRALKQGRMDALVTGK--FVGLSAPSKYGINIKVAGTLLYFEEIGVAIRKEDAELL 229

Query: 239 NIVSWTHYAMV 249
           + V+     M+
Sbjct: 230 DAVNTALQDMI 240


>gi|187780001|ref|ZP_02996474.1| hypothetical protein CLOSPO_03597 [Clostridium sporogenes ATCC
           15579]
 gi|187773626|gb|EDU37428.1| hypothetical protein CLOSPO_03597 [Clostridium sporogenes ATCC
           15579]
          Length = 278

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 79/260 (30%), Gaps = 21/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   +    ++ +               L  IK+ G +  G++               
Sbjct: 11  MKKTLLLVSSVILSIALLGGCGKTDKKLNSLEKIKEAGKITVGLDDSYPPMEFRDKENKL 70

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D    +   +        Y   +     LAL S + D++      T  R+    +
Sbjct: 71  VGFDIDLGNEIGKKLGVKTE---YTTTDFNGILLALNSGKFDVIISGLSITDKRKE--AI 125

Query: 117 AFRPITYFDGQGFI------MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
            F       GQ               I+ +S L   +I  Q G+T +    +        
Sbjct: 126 DFSEPYVMGGQVIAINKNNNTINNNTINKLSDLKDKTIGCQLGSTGDKAATEIKGLK--- 182

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                ++++ E      A R DA   D  A       +    ++ +L + +SK P+    
Sbjct: 183 -ETKRYDKITEAFHELIAGRIDAVIMD--AQVGGYYISKEKDKYKVLEETVSKEPMGIGF 239

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            + D E    V      +  
Sbjct: 240 KKEDKELKEAVQKALNELKE 259


>gi|262378934|ref|ZP_06072091.1| ABC-type amino acid transport/signal transduction system protein
           [Acinetobacter radioresistens SH164]
 gi|262300219|gb|EEY88131.1| ABC-type amino acid transport/signal transduction system protein
           [Acinetobacter radioresistens SH164]
          Length = 304

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 8/242 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIF----D 73
           + S  +  L  I++ G +  G     + F+ +        G+  D    +  A+      
Sbjct: 28  TGSAGSGTLEKIRQSGTVVLGHRDSSIPFSYIADNPNQPVGYAHDLQMKVVEALKQKLNK 87

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              K++Y  + ++ R   + +  +D+   +T     R     + F    +  G   +  K
Sbjct: 88  PDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFQVGSRLLTAK 145

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI   S L G  +   AGTT+E  +  + +   +    I  +   +     +  R  A
Sbjct: 146 DSGIKDFSDLKGKKVVTTAGTTSERYIRQHAQELGIG-EVISAKDHADSFLMLQNGRAAA 204

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L   K     P + VI+     +      + +GD E+  +V     A   + E
Sbjct: 205 FMMDDILLAGEKSKAKEPDKWVIVGTPPIQEVYGCMLRKGDKEFKQVVDDAIKATYASGE 264

Query: 254 LG 255
           + 
Sbjct: 265 IN 266


>gi|255318803|ref|ZP_05360029.1| glutamate/aspartate periplasmic-binding protein [Acinetobacter
           radioresistens SK82]
 gi|255304059|gb|EET83250.1| glutamate/aspartate periplasmic-binding protein [Acinetobacter
           radioresistens SK82]
          Length = 320

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 8/242 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIF----D 73
           + S  +  L  I++ G +  G     + F+ +        G+  D    +  A+      
Sbjct: 44  TGSAGSGTLEKIRQSGTVVLGHRDSSIPFSYIADNPNQPVGYAHDLQMKVVEALKQKLNK 103

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              K++Y  + ++ R   + +  +D+   +T     R     + F    +  G   +  K
Sbjct: 104 PDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFQVGSRLLTAK 161

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI   S L G  +   AGTT+E  +  + +   +    I  +   +     +  R  A
Sbjct: 162 DSGIKDFSDLKGKKVVTTAGTTSERYIRQHAQELGIG-EVISAKDHADSFLMLQNGRAAA 220

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L   K     P + VI+     +      + +GD E+  +V     A   + E
Sbjct: 221 FMMDDILLAGEKSKAKEPDKWVIVGTPPIQEVYGCMLRKGDKEFKQVVDDAIKATYASGE 280

Query: 254 LG 255
           + 
Sbjct: 281 IN 282


>gi|226362801|ref|YP_002780579.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226241286|dbj|BAH51634.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 336

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 10/239 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRA 66
           ++  L  +         S L +I  RG L  GI+     F+      G   GFDVD    
Sbjct: 74  ALASLRPVTAPDVRAPGSALAEITARGRLVVGIDQNTNLFSFRDPTTGMLMGFDVDVAGE 133

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +F DP+++++  L + +RF AL+ K +D++ ++T  T  R  S  +AF  + +   
Sbjct: 134 MARDLFGDPARVEFRLLTSGDRFDALEKKAVDLVVKSTTITCER--SERVAFSTVYFQAY 191

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           Q  ++ K  GIS    L+G  +C  A TT+  T+     A       +     ++     
Sbjct: 192 QRLLVPKVSGISGPEDLAGKRVCTVADTTSLDTVRRVQPAA----TIVTVPDWDDCLVTL 247

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +  R DA + D S L  L   +       I+   +   P    + +G+ +    V+ T 
Sbjct: 248 QQRRADAASTDDSILAGLAAQDPN---LEIVGPPLHSEPYGIGVNKGNEDLVRFVNGTL 303


>gi|17231622|ref|NP_488170.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120]
 gi|17133265|dbj|BAB75829.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120]
          Length = 301

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           MYK+  +++  L +      +  A   +  + + G L  G +   + FA   A G   G+
Sbjct: 1   MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGY 60

Query: 60  DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            VD    +            +++ +PL   +R   + ++Q+DI+   + +T  R+    +
Sbjct: 61  SVDMLSEIKRHLEKELGKKIQLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDK--KV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G   ++     + S   L G  I V A TT E  +         +   +  
Sbjct: 119 DFSVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRV----QPQAKLVYL 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E   A +  + DA++ D   L       + P +  I+PD   S+  +A  + + ++
Sbjct: 175 KSRSEGYTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNS 234

Query: 236 EWYNIVSWTH 245
           ++ + V+++ 
Sbjct: 235 KFLDAVNYSL 244


>gi|189310258|emb|CAP64356.1| probable extracellular solute-binding protein [Bordetella
           bronchiseptica 253]
          Length = 304

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80
             L  I   G +  G     + F+   AN    G+ +D C     A+ + I  D  +++Y
Sbjct: 29  GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICARIVDAVKARIKRDDIQVKY 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           LP+ +  R   + +  ID+   +T  TL R+  +   F   T+  G  FI  K   + ++
Sbjct: 89  LPVTSATRIPLMGNGTIDLECASTSNTLDRQKQVA--FSVTTFVTGNRFISLKSANLKTI 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++   +GT       +  +A  +    +  +   E        R  A+  D   
Sbjct: 147 DDLKGKTVVSTSGTANIRQANEINEARGLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           LY L      P  + +  D +S  P A  + + D ++  +V  T  ++  + +  
Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYASGDFE 261


>gi|56962545|ref|YP_174271.1| glutamine ABC transporter substrate-binding protein [Bacillus
           clausii KSM-K16]
 gi|56908783|dbj|BAD63310.1| glutamine ABC transporter substrate-binding protein [Bacillus
           clausii KSM-K16]
          Length = 273

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 11/237 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           S   S L  I++      G+      F       G+ +GFD+D  + ++  +  D +KI+
Sbjct: 34  SNEESTLAKIEEADKFVVGVKFDTRLFGLKDPGTGEVEGFDIDIAKEIAKELLGDENKIE 93

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              + +K R   L + QID +      T  R+    + F  + +  GQ  ++ K   I  
Sbjct: 94  LKEVTSKTRIPLLDNGQIDAIIATMTITEERKK--EVNFSDVYFEAGQSLLVEKGSDIQG 151

Query: 140 VSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +  + +G  +    G T+   L +           I  E  +E   A ++ + DA T D 
Sbjct: 152 IDDIGAGTKVLAVKGATSGQNLLEQAP----DAEVIELENYQEAFLALQSGQGDALTTDN 207

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S LY +    +  S++ ++    +  P   A+ +GD E+   ++     +  +    
Sbjct: 208 SILYGM---AEENSDYEVVGGTFTDEPYGIAVRKGDDEFTEKINEILADLKASGRYD 261


>gi|94310068|ref|YP_583278.1| extracellular solute-binding protein [Cupriavidus metallidurans
           CH34]
 gi|93353920|gb|ABF08009.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Cupriavidus metallidurans
           CH34]
          Length = 303

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 8/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    ++ ++                +  L   K  G L  G     + F+ +       
Sbjct: 8   MLAALWLGLVATFGATLAVAQDATVLSGTLKKAKDTGTLVIGYRESSLPFSYLNQASRPI 67

Query: 58  GFDVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           G+ +D C  +   +S        ++++P+ ++ RF A+ S +ID+   +T     R    
Sbjct: 68  GYSIDICTEIVQAASEEVGRELAVKWVPVTSENRFEAITSGKIDLECGSTTRNAER--MQ 125

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF P+ +  G   ++ +   I S   L G ++ V AGTT E  +A   K  ++  + I
Sbjct: 126 TVAFSPVIFIAGTKLMVPRASPIKSFRDLKGKTVVVTAGTTNEQAVAQLSKRFDLNINLI 185

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 +  A       DAY GD   LY          + +I  D IS  P    + + D
Sbjct: 186 RVRDHADAFAVLSRGGADAYAGDDVLLYGFLAHYGAGKKFIITRDFISYDPYGIMLRKND 245

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            ++  +V      ++T+ ++ 
Sbjct: 246 PQFATLVGKAVRDVITSGDME 266


>gi|54027317|ref|YP_121559.1| putative transporter substrate-binding protein [Nocardia farcinica
           IFM 10152]
 gi|54018825|dbj|BAD60195.1| putative transporter substrate-binding protein [Nocardia farcinica
           IFM 10152]
          Length = 323

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 10/228 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77
           + +T    L  I++RG L  G++TG   F+      G   GFD D  R ++  +   P  
Sbjct: 72  TGATTGPTLDAIRRRGRLLVGLDTGSNLFSFRDPITGAVVGFDADIAREIARDLLGSPDL 131

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I++  + + +R  ALQ + +D++++    T  R     +AF  +     Q  +  K  GI
Sbjct: 132 IEFRSMGSADREQALQDRTVDLVAKTMTITCERRR--KVAFSTVYLRADQRVLAMKDSGI 189

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             ++ L+G  +CV  GTT+   +     A       +      +     +  + DA + D
Sbjct: 190 RGLADLAGKRVCVVRGTTSLEHVRREQPAA----TVLTVPSWADCLVVLQQRQVDAVSTD 245

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + L  L   +       ++ + IS  P    I +   +    V+ T 
Sbjct: 246 DAILAGLAAQDP---YTEVVGESISVEPYGIGIPREADDLVRFVNRTL 290


>gi|307637843|gb|ADN80293.1| Aminoacid ABC transporter binding protein [Helicobacter pylori 908]
          Length = 277

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G+++G+
Sbjct: 8   KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 NPYMKVALGVIS-KDGIIKNIEELKNKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|254254170|ref|ZP_04947487.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124898815|gb|EAY70658.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 298

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 83/251 (33%), Gaps = 8/251 (3%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F     +L   +            L  IK  G +  GI    V F+         G
Sbjct: 1   MNRRFRCLTVVLACALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +   +  + +     ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDQLKTELNVPSLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    +  G  F   K  G+     L+G ++   AGT+ E  L    +   M    I
Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E        R  A+  D   LY     +  P  + +    +     A  + + D
Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRKDD 238

Query: 235 TEWYNIVSWTH 245
             +  +V    
Sbjct: 239 PAFKRVVDGVI 249


>gi|227113891|ref|ZP_03827547.1| extracellular solute-binding protein [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 278

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L L  L   S +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKQILTVTL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L S+++D+++ N   T  R     + F 
Sbjct: 60  DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 115 IPYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          E  I P  I+K      I +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229

Query: 238 YNIVSWTH 245
              ++ T 
Sbjct: 230 TAKINDTL 237


>gi|289672924|ref|ZP_06493814.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae FF5]
 gi|330982422|gb|EGH80525.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 290

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 8/231 (3%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   + S ++S L  IK R  L  G+ +    F  V   G + GFD D  +  +  +  D
Sbjct: 29  VAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 88

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             KI+++ +    R   LQS ++D++  N   T  R     + F           ++ + 
Sbjct: 89  EKKIEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTNPNLRVAVQALVPQA 146

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + ++  L+  +  V  GTT +L L      ++  +  + FE+  E   A    R DAY
Sbjct: 147 SPVKTLDDLASKTTIVTTGTTADLWLT----KNHPDWKVLKFEKNSESLQALANGRGDAY 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D   L++       P   V+   +  ++P+APA+ +G+ E  + V+   
Sbjct: 203 AQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPAVKKGNIELRDWVNTEL 251


>gi|293608330|ref|ZP_06690633.1| predicted protein [Acinetobacter sp. SH024]
 gi|292828903|gb|EFF87265.1| predicted protein [Acinetobacter sp. SH024]
          Length = 297

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +S + L  +  TS    A  L  IK  G +  G        + V A G   
Sbjct: 1   MKRSATSLIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L +  ID+    T  +  R+  
Sbjct: 60  GYAVDICNQFANDIKKELKMPSLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K   +    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P    I+  ++S  P    + + 
Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237

Query: 234 DTEWYNIVSWTHY 246
           D ++  +   T  
Sbjct: 238 DPKFKAVADRTVN 250


>gi|217423103|ref|ZP_03454605.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 576]
 gi|217394011|gb|EEC34031.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 576]
          Length = 292

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
              L  I+  G +  G+    V F+         G+  +    +   I          ++
Sbjct: 20  GPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIGYSQEIALKIVDEIKKTLNRPNLTVR 79

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   +Q+  +D+   +T  T  R  +  ++F    +  G   I+ K  G+  
Sbjct: 80  EIPITSQNRIPLVQNGTVDLECGSTTHTKER--ANQVSFSNSIFQYGMRLIVKKSSGVKD 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G ++   AGTT E  L  +     M    I  +   +     ++ R  A+  D  
Sbjct: 138 FPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDEP 197

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            LY  K     P ++VI  +          + + D  +  +       M  + E  
Sbjct: 198 LLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDDPGFKQLADRVIARMQRSGEAE 253


>gi|322421000|ref|YP_004200223.1| family 3 extracellular solute-binding protein [Geobacter sp. M18]
 gi|320127387|gb|ADW14947.1| extracellular solute-binding protein family 3 [Geobacter sp. M18]
          Length = 264

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 80/246 (32%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K + V    L++    S          +K +G L  G++            G   GFD
Sbjct: 1   MKKIWVVLSSLLVLACAVSAFAGDGSFKRVKSQGALTIGLDDAFPPMGYRNDKGQLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D        +     KI + P        AL SK+ D +      T  R+  +   F  
Sbjct: 61  IDAAEEAGKRLG---IKINWQPTAWDGVIHALNSKKFDCIWNGMTITEERKKEVA--FTK 115

Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               D     +   +K    ++ L GA + VQ G++    +     A         +E  
Sbjct: 116 PYKMDGQVAVVRFGEKKFKKLADLKGAKVGVQKGSSAVEAVKKLPAA---PAEVREYEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R D    D +          RP +  I+P  I+K P   A  + D E   
Sbjct: 173 PKALLDLESKRLDTVIIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKEDVELRE 230

Query: 240 IVSWTH 245
            V  T 
Sbjct: 231 AVQKTL 236


>gi|327463114|gb|EGF09435.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK1]
          Length = 270

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%)

Query: 17  FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
                 ++S    + DI+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AAPAQADSSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I  V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKIKDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKIYDKYDLKPSTSTDD 270


>gi|168186417|ref|ZP_02621052.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium botulinum C str. Eklund]
 gi|169295555|gb|EDS77688.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium botulinum C str. Eklund]
          Length = 272

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 93/257 (36%), Gaps = 21/257 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEV 50
           M K    + I+ + ++  T   +  +             +KK G L  G++ G       
Sbjct: 1   MKKIISILLIVMMGVVALTGCGSKGASAKSSGSDSSLESVKKSGKLLVGLDDGYPPMEFR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  GFDVD  R +   I      ++++P       L LQSK+ D +      T  R
Sbjct: 61  DEKNNLVGFDVDLAREIGKKIGVK---VEFIPTEFSGILLGLQSKKFDTIIAGFTMTDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +    L F       GQ   + K    I  +S L G  I  Q G+  ++T     +    
Sbjct: 118 KK--SLNFTEPYVLGGQIVAVKKGNTSIKKLSDLKGKIIGCQMGSAGQITAE---RKLKD 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 + ++ E  +     R DA   D  A       + +P +  +L ++++K P+  A
Sbjct: 173 IKELRKYGKITETFSDMSIGRIDAVIMD--AQVGGYYISKKPGQFEVLDEMVAKEPMGIA 230

Query: 230 IIQGDTEWYNIVSWTHY 246
             +GD    N V     
Sbjct: 231 FRKGDNALKNEVQKIIN 247


>gi|293572581|ref|ZP_06683555.1| glutamine-binding protein [Enterococcus faecium E980]
 gi|291607364|gb|EFF36712.1| glutamine-binding protein [Enterococcus faecium E980]
          Length = 271

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56
            K   + +L +  L           N  IL   K    +  G+      F  +   +   
Sbjct: 5   KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEISWGVKYDTRLFGMMDIESRTV 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDVD  +A++  I  +  K +++ + +K R   L++  ID +      T  R+    +
Sbjct: 65  QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175
            F  + +  GQ  ++ K   I SV  L+ ++      G+T+   +  +    N     + 
Sbjct: 123 DFSDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E   E   A ++ + DA T D + L  +   ++ P E+ ++    +  P   AI +G  
Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235

Query: 236 EWYNIVSWTH 245
            +   V+   
Sbjct: 236 NFLKAVNQAL 245


>gi|308183276|ref|YP_003927403.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori PeCan4]
 gi|308065461|gb|ADO07353.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori PeCan4]
          Length = 277

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|170691878|ref|ZP_02883042.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170143162|gb|EDT11326.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 306

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M +++F   +  + +  +S                 L  + +   +  G     V F+  
Sbjct: 1   MKREYFARAIVTVAIATSSALQLHGVKAAEPALTGTLLKVSEDKVITIGYRDASVPFSYY 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            AN    G+ +D    +   I  D      K++ +P+ ++ R   LQ+  ID    +T  
Sbjct: 61  DANQKPIGYSIDVANLVIERIRKDLKLPDLKVRTIPITSQNRLSLLQNGTIDFECTSTTN 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R     ++F    +  G   +++ K GI     L   ++ V AGTT+E +L      
Sbjct: 121 NAERAR--QVSFSNSFFIIGTRLLVNTKSGIKDFDDLKDKTVVVGAGTTSEKSLRKMNVE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            +M    I  +   E        R  A   D + L   +     P+++ I+    S    
Sbjct: 179 KSMNMDIISAKDHAESFLMLTTGRAKAMMMDDALLAGERAKTRNPNDYEIVGTPQSYEAY 238

Query: 227 APAIIQGDTEWY 238
              + + D    
Sbjct: 239 GCMLRKNDAPMK 250


>gi|262278835|ref|ZP_06056620.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259186|gb|EEY77919.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus
           RUH2202]
          Length = 297

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 10/253 (3%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +S   L  +  TS    A  L  IK  G +  G        + V A G   
Sbjct: 1   MKRSATSLIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPV 59

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD C   +      +     K++Y  + +  R   L +  ID+    T  +  R+  
Sbjct: 60  GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQ 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y       +    GI S++ L+G ++    GTT++  +    K   +    
Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQALTIQN 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I  +   +  A   + R  A+  D + L  L   +  P    I+  ++S  P    + +G
Sbjct: 178 IYGKDHSDSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKG 237

Query: 234 DTEWYNIVSWTHY 246
           DT++  I   T  
Sbjct: 238 DTKFKAIADRTVN 250


>gi|330901546|gb|EGH32965.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 290

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 8/228 (3%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   + S ++S L  IK R  L  G+ +    F  V   G + GFD D  +  +  +  D
Sbjct: 29  VAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 88

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             KI+++ +    R   LQS ++D++  N   T  R     + F           ++ + 
Sbjct: 89  EKKIEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTNPNLRVAVQALVPQA 146

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + ++  L+  +  V  GTT +L L      ++  +  + FE+  E   A    R DAY
Sbjct: 147 SPVKTLDDLASKTTIVTTGTTADLWLT----KNHPDWKVLKFEKNSESLQALANGRGDAY 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             D   L++       P   V+   +  ++P+APA+ +G+ E  + V+
Sbjct: 203 AQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPAVKKGNIELRDWVN 248


>gi|78066232|ref|YP_369001.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77966977|gb|ABB08357.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 271

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 91/249 (36%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M  +   + L    L       +A  L DIKK G L+         F  V        G 
Sbjct: 1   MKINTLATWLVGAALITAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDGKSNHIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QLS   +    GTT E+TL + F         + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLSALRVGADKGTTNEITLREKFPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 231 FVNDTLKGL 239


>gi|325996441|gb|ADZ51846.1| Aminoacid ABC transporter, binding protein precursor [Helicobacter
           pylori 2018]
 gi|325998030|gb|ADZ50238.1| Amino acid ABC transporter binding protein [Helicobacter pylori
           2017]
          Length = 277

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G+++G+
Sbjct: 8   KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 NPYMKVALGVIS-KDGIIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|171778294|ref|ZP_02919500.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282994|gb|EDT48418.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 290

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 29/261 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42
           M   K F   +  L+I+F    S                  A  L  IKK G +K G+ +
Sbjct: 1   MKIVKRFLAIVSLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFS 60

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               F  V   G ++G+D+ F   L+  +      ++Y+ ++   R   L S ++DI+  
Sbjct: 61  DKKPFGYVDDKGKYQGYDIYFANRLAKDLGVK---VKYVSVDPASRVEYLTSAKVDIILA 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
           N   T  R     + F         G +    + IS V  L G ++ V  GTT E     
Sbjct: 118 NFTVTDERAK--QVDFALPYMKVALGVVSPSNQLISDVDALEGKTLIVGKGTTAETY--- 172

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
            F+ H  K + + F++  E   A    R DA + D + + A     +     V +  +  
Sbjct: 173 -FEKHYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWA--LENKGYKVGITSLGD 229

Query: 223 KSPLAPAIIQGDTEWYNIVSW 243
              +APA+ +G+TE  + ++ 
Sbjct: 230 TDTIAPAVQKGNTELLDWIND 250


>gi|227329657|ref|ZP_03833681.1| extracellular solute-binding protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 280

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L L  L   S +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKQILTVTL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L S+++D+++ N   T  R     + F 
Sbjct: 60  DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 115 IPYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          E  I P  I+K      I +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229

Query: 238 YNIVSWTH 245
              ++ T 
Sbjct: 230 TAKINDTL 237


>gi|315634945|ref|ZP_07890227.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Aggregatibacter segnis ATCC 33393]
 gi|315476497|gb|EFU67247.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Aggregatibacter segnis ATCC 33393]
          Length = 284

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 16/249 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
            K   +    L+ +  T+ +          +S +  +K+ G ++ G+ +    F  V + 
Sbjct: 6   KKVTALFATALLAIGLTACNDKEGKTELATSSTIEQLKQAGKVRVGVFSDKPPFGYVDSQ 65

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  +GFDV+  +A++  +  D +K +Y+ + A  R   L S ++DI+  N   T  R   
Sbjct: 66  GKSQGFDVEIAKAITKDLLGDENKAEYVLVEAANRVEYLTSNKVDIILANFTVTPARAEV 125

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +      I+ V+QL G ++ +  GTT +      F  +      
Sbjct: 126 --VDFAKPYMKVALGVVSKDGAVITDVNQLKGKTLLINKGTTADAY----FTKNYPDIKL 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + FE+  E   A R  R DA   D + L+A     +     V + ++  +  +APA+ +G
Sbjct: 180 LKFEQNTETFEALRDGRGDALAHDNTLLFAWA--KENSGFTVGVKNLGDQDFIAPAVKKG 237

Query: 234 DTEWYNIVS 242
           D E  N ++
Sbjct: 238 DVELLNWLN 246


>gi|226331009|ref|ZP_03806527.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198]
 gi|225201804|gb|EEG84158.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198]
          Length = 287

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 88/248 (35%), Gaps = 11/248 (4%)

Query: 14  ILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCR 65
           ++   + +  A      L  I     +  G     V F+         G+  D      +
Sbjct: 1   MILGAAGAVQAEELTGTLKKINDNDIIIVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVQ 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+   I     +++ +P+ ++ R   LQ+   D    +T     R      +F    +  
Sbjct: 61  AVKDKIGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNEAR--QQQASFSNTIFIV 118

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   +  K  GI   + LSG ++ V +GTT+E+ L        M    I  +   +    
Sbjct: 119 GTRLLAKKDSGIKDFADLSGKNVVVTSGTTSEMLLNKLNDEKKMNMRIISAKDHGDSFRT 178

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + R  A+  D + L   +    +P E  I+    S+      + + D ++  ++  T 
Sbjct: 179 LESGRAVAFMMDDALLAGERAKAKKPGEWEIVGTPQSEEAYGCMLRKDDAQFKALIDETI 238

Query: 246 -YAMVTAE 252
             A  + E
Sbjct: 239 ANAQKSGE 246


>gi|253690631|ref|YP_003019821.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251757209|gb|ACT15285.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 278

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L L  L   S +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKQILTVTL-LAGLASISGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L S+++D+++ N   T  R     + F 
Sbjct: 60  DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 115 IPYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          E  I P  I+K      I +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229

Query: 238 YNIVSWTH 245
              ++ T 
Sbjct: 230 TAKINDTL 237


>gi|212711638|ref|ZP_03319766.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM
           30120]
 gi|212685740|gb|EEB45268.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM
           30120]
          Length = 279

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 112/328 (34%), Gaps = 65/328 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M   F  S L +  L  T+   +A  L DIK+ G ++  +      F  +        G+
Sbjct: 1   MKARFLTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A++  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DIDIAQAIADDLGVK---LELRPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   ++   I    GT  E+TL + F +       I ++  
Sbjct: 116 IPDFATGQKFIARKG-VLKTPEDIAPLRIGADKGTVQEVTLRERFPS----TKVISYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237
            +  AA R     A T D + L  L         ++  I P  ++K   A    +G+T  
Sbjct: 171 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALGASKGETRL 230

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              V+ T                                L ++K                
Sbjct: 231 IENVNAT-------------------------------LLKLEKEGKA------------ 247

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
                  N  E+++R  G  ++   PRG
Sbjct: 248 -------N--EIYNRWFGPDTKAAQPRG 266


>gi|17546976|ref|NP_520378.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17429277|emb|CAD15964.1| probable amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 284

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 12/251 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63
                 +  +   +    A  L D+KK+G L CG+      F+ +K   + +  G+DVD 
Sbjct: 13  LACAAIVAAVTLAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 72

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C A++ ++   P       L    R   LQ  ++D+L+ +      RE    + F   T+
Sbjct: 73  CNAVAKSLGVKP---VLKQLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSVSTF 127

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             GQ  ++ K  GI+S++QL G  +    G+T E  +    K        + F+   +  
Sbjct: 128 VTGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIGKTIK----NADIVSFDNSPQAL 183

Query: 184 AAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A +  +  AY  D + L            ++ +LP  +S    A  + + +  +   V+
Sbjct: 184 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYALLPQNLSTEHFALGLRKNEPAFREQVN 243

Query: 243 WTHYAMVTAEE 253
                +  + E
Sbjct: 244 KVLRGLEASGE 254


>gi|91778558|ref|YP_553766.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91691218|gb|ABE34416.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 272

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 110/325 (33%), Gaps = 64/325 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      +++   +L  ++ + +A  L DIKK G L+         F  V        G 
Sbjct: 1   MNLRVLGAVIAGSLLVMSA-AAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGL 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D+ RA+++ +      ++  P N   R   L+S ++D++  N   T  R+    + F 
Sbjct: 60  DIDYARAVANRLGVK---LEVQPTNPANRIAFLKSGKVDLVFANFTITDDRKK--EVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  G  FI  K   ++S  QL+   I    GTT E  +   F         I ++  
Sbjct: 115 IPYFASGTQFIAKKG-TLTSPQQLNSLRIGADKGTTNEQQVRAQFP----GATIIAYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA R     A T D   L AL       + + I P  IS       + +G+T   N
Sbjct: 170 PFAFAALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLN 229

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V+ T                                                       
Sbjct: 230 VVNDTLKD---------------------------------------------------- 237

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324
           +   G  G+++D   G +S   +PR
Sbjct: 238 LEAKGTAGQIYDTWFGPKSAAPLPR 262


>gi|312963583|ref|ZP_07778064.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311282092|gb|EFQ60692.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 300

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 87/240 (36%), Gaps = 7/240 (2%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDP 75
           +     L  I     +  G     V F+ V  ++G   G+ VD    +   I        
Sbjct: 24  AALDGTLSKIANAKSITLGYRDASVPFSYVGDSSGKPMGYSVDLASRIVERIQQKTGVAN 83

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +QY  + ++ R   +Q+  +D+   +T  T  R+  +   F     +     +  +  
Sbjct: 84  LNVQYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTARDS 141

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI   + L G ++   AGTT E  L  Y   H      I  +   E        R  A+ 
Sbjct: 142 GIKGFADLEGKNVVTTAGTTNERFLKSYNAEHKANMFVISAKDHGEAFKMLETGRAVAFY 201

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D + LY  +     P   V++ +  S+   +  + + D ++  +V+     +  + E+ 
Sbjct: 202 MDDALLYGERAKAKDPHHWVVVGEEQSREIYSCMVRKDDPQFLAVVNEALADLYRSGEIN 261


>gi|302185657|ref|ZP_07262330.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae 642]
 gi|330898559|gb|EGH29978.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 304

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D    +  AI  D    
Sbjct: 23  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T     R     + F    +  G   +  K 
Sbjct: 83  DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNAER--QQQVDFSIGIFEVGTRLLSKKD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P +  +     S       + +GD  +   V     A   + ++
Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|210615937|ref|ZP_03290860.1| hypothetical protein CLONEX_03079 [Clostridium nexile DSM 1787]
 gi|210150030|gb|EEA81039.1| hypothetical protein CLONEX_03079 [Clostridium nexile DSM 1787]
          Length = 268

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 88/255 (34%), Gaps = 13/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55
           M K   + +   + +        A      ++ G         G +        V  +G+
Sbjct: 1   MKKKIALIMALALSVTTVFAGCGAKDDQKQRESGSGTQKTFTVGFDQDFPPMGFVGDDGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D  + ++  +  D   +   P++   + + L S  ID +      T   +    
Sbjct: 61  YTGFDLDLAKEVADRL--DMKFVP-KPISWDAKDMELSSGGIDCIWNGFTMTGREDK--- 114

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             +      + Q F++ K  GI + + L+G  + VQ  ++ +  L    K         +
Sbjct: 115 YTWSEPYLNNEQVFVVKKDSGIKTQADLAGKVVDVQTDSSAQKALEQQEKLQKSFKELKI 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                       +   DA   D   + A      R ++ V+L D ++    A   ++G+ 
Sbjct: 175 VADYNTAFMDLESGAVDAIAMD--IVVAKYQIEQRKADFVLLDDALASEEYAVGFLKGND 232

Query: 236 EWYNIVSWTHYAMVT 250
           E  + V  T   M  
Sbjct: 233 ELRDKVQKTLEEMAE 247


>gi|298735821|ref|YP_003728346.1| putative glutamine transport system substrate-binding protein
           [Helicobacter pylori B8]
 gi|298355010|emb|CBI65882.1| putative glutamine transport system substrate-binding protein
           [Helicobacter pylori B8]
          Length = 277

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|315640020|ref|ZP_07895146.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
 gi|315484229|gb|EFU74699.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
          Length = 267

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 88/258 (34%), Gaps = 8/258 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L   ++   +  ++         +  +  G++   V       +G   GFD
Sbjct: 1   MKKWVSLVMLVASVVGLAACGSSEKTTESAADKKTVVVGLDDTFVPMGFKDDDGTIVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ +    D +K+++ P++   +   L +  ID++         R+    + F  
Sbjct: 61  VDLANAVFA--LTD-TKVKFQPIDWSMKETELANGTIDMIWNGYTMNDERKK--KVTFSD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL---ADYFKAHNMKYHPIVFE 177
               + Q  +  K  GI++V  + G  +  Q G++        AD  K         ++ 
Sbjct: 116 SYMKNTQVLVTKKSSGITTVDGMKGKILGAQEGSSGYNVFTKQADVLKDIVQDEDATLYA 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E        R D    D              S++ I+    ++   A  + +GD + 
Sbjct: 176 SFNEAFIDLEHGRIDGLLVDNVYAGYYLKQAGTLSDYNIIETPYTQESFAVGVRKGDDKL 235

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++     +    +  
Sbjct: 236 AEKINEGLKTLKENGKYD 253


>gi|134098327|ref|YP_001103988.1| putative glutamate binding protein [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291004253|ref|ZP_06562226.1| putative glutamate binding protein [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133910950|emb|CAM01063.1| putative glutamate binding protein [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 299

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 95/257 (36%), Gaps = 10/257 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK-IQYL 81
           +     IK+RG +  G+     G        G + GFD++  R +++ +  DP+  I Y 
Sbjct: 49  SPTFDRIKQRGRVTVGVKEDQPGLGFRDPVTGQYSGFDIEIARLVAAQLGLDPNTAIDYK 108

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSV 140
           P+ +  R  AL + ++D           R+  +G  F    +  GQ  ++ K    I+  
Sbjct: 109 PIPSTAREQALATGEVDYYVGTYTINDKRKEQVG--FAGPYFMAGQDVLVRKDNTDITGP 166

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G  +C   G+T    + +         + + F+R  E        + DA T D + 
Sbjct: 167 ETLKGKKVCSATGSTPIQRVKEQ--QLTEPQNIVEFQRYSECVQQLLDGQIDAVTTDDAI 224

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH-YAMVTAEELGITQK 259
           L         P +  ++    S+ P    + + D    N ++     A  + E   +   
Sbjct: 225 LKGYAAQ--DPDKLKVVGKTFSEEPYGIGVAKDDIALRNKINDVLEQAAKSGEWKRVYDA 282

Query: 260 NINQVSKDTTNPDVQRF 276
            + +       P V R+
Sbjct: 283 TLGKSGTGAEPPPVDRY 299


>gi|329666939|gb|AEB92887.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Lactobacillus johnsonii DPC 6026]
          Length = 273

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 96/250 (38%), Gaps = 14/250 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +   FF   + L  +F  S       ++  ++KK   +  G+      F  +    G 
Sbjct: 1   MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF+VD   AL+  I    +K  ++   AK +   L++  ID +      T  R+    
Sbjct: 61  IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    ++ GQ  ++     I S+  ++G +     GTT    +  +          + 
Sbjct: 119 IDFSDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKAK----VLE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A +  A T D   L  +   N     + ++    +K P   A+ +G T
Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTKEPYGIAVNKGQT 231

Query: 236 EWYNIVSWTH 245
           +  N ++   
Sbjct: 232 QMKNAINRAL 241


>gi|50123386|ref|YP_052553.1| extracellular solute-binding protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613912|emb|CAG77365.1| extracellular solute-binding protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 278

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L L  L   S +  A  L DI+K G +K  +      F  V   +    G+
Sbjct: 1   MKKQILTVTL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L S+++D+++ N   T  R     + F 
Sbjct: 60  DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 115 LPYFATGQKFIARKG-VLKTPDDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
                A R     A T D + L  L          E  I P  I+K      I +G+   
Sbjct: 170 PLAFVALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229

Query: 238 YNIVSWTH 245
              ++ T 
Sbjct: 230 TAKINDTL 237


>gi|320546920|ref|ZP_08041222.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
 gi|320448438|gb|EFW89179.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
          Length = 290

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 29/261 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42
           M   K F   I  L+I+F    S                  A  L  IKK G +K G+ +
Sbjct: 1   MKIVKRFLAIISLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFS 60

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               F  V   G ++G+DV F   L+  +      ++Y+ ++   R   L S ++DI+  
Sbjct: 61  DKKPFGYVDDKGKYQGYDVYFANRLAKDLGVK---VKYVSVDPASRVEYLTSAKVDIILA 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
           N   T  R     + F         G +    + IS V  L G ++ V  GTT E     
Sbjct: 118 NFTVTDERAK--QVDFALPYMKVALGVVSPSNQLISDVDALEGKTLIVGKGTTAETY--- 172

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
            F+ H  K + + F++  E   A    R DA + D + + A     +     V +  +  
Sbjct: 173 -FEKHYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWA--LENKGYEVGIISLGD 229

Query: 223 KSPLAPAIIQGDTEWYNIVSW 243
              +APA+ +G+TE  + ++ 
Sbjct: 230 TDTIAPAVQKGNTELLDWIND 250


>gi|325567190|ref|ZP_08143857.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158623|gb|EGC70769.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus casseliflavus ATCC 12755]
          Length = 267

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 8/249 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I    +    +  ++         +  +  G++   V        G+  GFD
Sbjct: 1   MKKLLLTGIAAASVFLLGACGSSNDTTTSAADKEEVIVGLDDTFVPMGFKDDQGNIVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+        +K+++ P++   +   L +  ID++      T  RE    + F  
Sbjct: 61  VDLATAILDLTG---TKVKFQPIDWSMKETELSNGTIDMIWNGYTKTAAREE--KVLFTD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177
               + Q  +  K  GI+S   + G  +  Q G++   T     +  K         ++ 
Sbjct: 116 TYMENKQVLVTAKSSGITSFDDMEGKVLGAQEGSSGYETFNNQPEVLKDLVDGNDATLYA 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E        R D    D            +  +   +         A  + + D   
Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTGKTDDFNEIESPFEAEDFAVGVRKDDQAM 235

Query: 238 YNIVSWTHY 246
            + ++    
Sbjct: 236 ADKINDGLK 244


>gi|213970375|ref|ZP_03398504.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301381158|ref|ZP_07229576.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302063124|ref|ZP_07254665.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132571|ref|ZP_07258561.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213924846|gb|EEB58412.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 290

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 21/258 (8%)

Query: 2   YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48
           +K   V  L    L                + S + S L  IK R  L  G+ +    F 
Sbjct: 3   FKTALVLPLIAFTLLAGCDKPAEQKPVAKAAPSPSTSYLETIKARDKLIVGVFSDKPPFG 62

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V   G + GFD D  +  +  +  D  K++++ +    R   LQS ++D++  N   T 
Sbjct: 63  FVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTP 122

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R  S  + F           ++ +   + ++  L+  +  V  GTT ++ L      ++
Sbjct: 123 ER--SEAVDFTHPNLRVAVQALVPEASPVKTLDDLASKTTIVTTGTTADIWLT----KNH 176

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
             +  + FE+  E   A    R DAY  D   L++       P   V+   +  ++P+AP
Sbjct: 177 PDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A+ +G+ E  + V+    
Sbjct: 235 AVKKGNIELRDWVNTELT 252


>gi|312602223|ref|YP_004022068.1| hypothetical protein RBRH_00467 [Burkholderia rhizoxinica HKI 454]
 gi|312169537|emb|CBW76549.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 283

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 95/253 (37%), Gaps = 12/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M      ++L   +L   +   +A  L DIKK G L+         F  V A      G 
Sbjct: 14  MKSTVLSTLLA-GLLIVAAGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDAKTHHIVGL 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      ++  P N   R   L S+++D++  N   T  R     + F 
Sbjct: 73  DVDYAKALADKLGVK---LELQPTNPANRIPFLTSRKVDLVLANFTITEERAK--QVDFS 127

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  I    GT  E+TL + F         + ++  
Sbjct: 128 IPYFASGQQFLAKKG-VLKSAEQLNGLRIGADKGTINEITLREKFPQA----TIVAYDDT 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   I +G+T    
Sbjct: 183 PFAFAALRAGNVQAITQDGPKLVGLLANVPDKQNYEIPAFTISNDYMGVGIPKGETRLVA 242

Query: 240 IVSWTHYAMVTAE 252
            V+ T   +    
Sbjct: 243 FVNDTLRGLEKGG 255


>gi|167586688|ref|ZP_02379076.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 302

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79
           A  L  I++   +  G     V F+ V A+G   GF  D C  + +A+         +++
Sbjct: 30  AGTLAKIQQSNVIAIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVRARTGKPDLQVR 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++P+ ++ R   +Q+  +D+    T     R   +   F    +      +     GI  
Sbjct: 90  FIPVTSQNRMPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTTSGIRD 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G ++    GTT+E  L    +   M    I  +   E      + R  AY  D  
Sbjct: 148 FPDLAGKTVVTNQGTTSERLLRRMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDV 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L  ++    +P++  I+    S       + + D ++  +V      ++ + E+ 
Sbjct: 208 LLAGVRQLAAKPADWTIVGTPQSSEAYGFMLRKDDPQFKALVDGVLAQVMKSGEIN 263


>gi|104780401|ref|YP_606899.1| glutamate/aspartate ABC transporter periplasmic binding protein
           [Pseudomonas entomophila L48]
 gi|95109388|emb|CAK14088.1| glutamate/aspartate ABC transporter, periplasmic binding protein
           [Pseudomonas entomophila L48]
          Length = 305

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 85/237 (35%), Gaps = 8/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  IK  G +  G     + F+ +    +  G+  D   A+  A+        K++Y 
Sbjct: 28  GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVEALKKQLGTDIKVKYN 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138
            + ++ R   +Q+  +D+   +T   + R+  +G  F    +  G   +   K       
Sbjct: 88  LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPSFK 145

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G ++   AGTT+E  L        MK + I  +   E      + R  A+  D 
Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + L        +P++ VI     S       + + D  +   V     A   + E+ 
Sbjct: 206 ALLAGEMAKAKKPTDWVITGTPQSYEIYGCMVRKDDPAFKKAVDEAIVAYFKSGEVN 262


>gi|28870257|ref|NP_792876.1| glutamine/glutamate ABC transporter periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28853504|gb|AAO56571.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|331016472|gb|EGH96528.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 290

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 21/258 (8%)

Query: 2   YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48
           +K   V  L    L                + S + S L  IK R  L  G+ +    F 
Sbjct: 3   FKTALVLPLIAFTLLAGCDKPAEQKPVAKAAPSPSTSYLETIKARDKLIVGVFSDKPPFG 62

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V   G + GFD D  +  +  +  D  K++++ +    R   LQS ++D++  N   T 
Sbjct: 63  FVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTP 122

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R     + F           ++ +   + ++  L+  +  V  GTT ++ L      ++
Sbjct: 123 ERAE--AVDFTHPNLRVAVQALVPEASPVKTLDDLASKTTIVTTGTTADIWLT----KNH 176

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
             +  + FE+  E   A    R DAY  D   L++       P   V+   +  ++P+AP
Sbjct: 177 PDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A+ +G+ E  + V+    
Sbjct: 235 AVKKGNIELRDWVNTELT 252


>gi|261344518|ref|ZP_05972162.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Providencia rustigianii DSM 4541]
 gi|282567430|gb|EFB72965.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Providencia rustigianii DSM 4541]
          Length = 280

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 112/328 (34%), Gaps = 65/328 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      S L +  L  T+   +A  L DIK+ G ++  +      F  +        G+
Sbjct: 1   MKARILTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPKTKKLAGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A++  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DIDIAQAIADDLGVK---LELRPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   ++   I    GT  E+TL + F         I ++  
Sbjct: 116 IPDFATGQKFIARKG-VLKTPEDIAPLRIGADKGTVQEVTLRERFP----NTKVISYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237
            +  AA R     A T D + L  L         ++  I P  ++K   A A  +G+T  
Sbjct: 171 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGETRL 230

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              V+ T                                L ++K                
Sbjct: 231 VESVNET-------------------------------LLKLEKQGKA------------ 247

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
                  N  E+++R  G +++   PRG
Sbjct: 248 -------N--EIYNRWFGPETKAAQPRG 266


>gi|326384625|ref|ZP_08206303.1| extracellular solute-binding protein family 3 protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196592|gb|EGD53788.1| extracellular solute-binding protein family 3 protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 328

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 10/225 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            S +  I KRG L  G + G    +     +GD KGFD+D    +S+AIF DP+ I+Y  
Sbjct: 83  GSTMDRIAKRGRLVVGTDLGSNPLSFRDPISGDVKGFDIDVAHWISAAIFGDPNLIEYRM 142

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +    R  AL++  +DI+ +    T   +    ++F    Y   Q  + ++  GIS  S 
Sbjct: 143 ITNDNRSEALENGTVDIVVKTMSITC--DRLKTVSFSVPYYAASQQILAYRNSGISQASD 200

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+G ++C    +T+   + +   +       I      +     +  + DA T D   L 
Sbjct: 201 LAGKNVCATRSSTSIARVQEAVPSAKF----ITTASWADCLVMMQQGQVDAITSDDPILA 256

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
            +   +       ++ D +        I +G  +    V+    A
Sbjct: 257 GIAAQDP---WVQVVGDSLGTEYYGVGIPKGQDDLVRFVNGVLAA 298


>gi|317053431|ref|YP_004119198.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316953170|gb|ADU72642.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 302

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 90/255 (35%), Gaps = 6/255 (2%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F      ++    +       L  I   G +  G   G V F+         G+ +D C
Sbjct: 7   LFTVFTLGMLALPVAGEELNGTLKKIADSGEIAVGHRDGAVPFSYYDDKQQPIGYAMDIC 66

Query: 65  ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                A+ + +     K+  + +    R   L +  ID+    T     R+    + F  
Sbjct: 67  GAVVDAVKAKLNKPDLKVDTMAVTGATRIPLLANGTIDMECGTTTNNAERQK--QVTFST 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  K   +S +++L G ++   AGTT+   + D   A ++    ++ + + 
Sbjct: 125 TYFVAAVRIMSKKSAPVSDMAELKGKAVVTLAGTTSVKIINDANNAQHLGMRILLAKDLA 184

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        R  A+  D  +L   + T   P ++ I    +S  P    + + D ++  +
Sbjct: 185 EGMLTLETGRAAAFIFDDVSLAGARATAKSPDDYQISEQPLSVEPYGIMLRRDDPQFKAL 244

Query: 241 VSWTHYAMVTAEELG 255
           V+     +  +  + 
Sbjct: 245 VNAAIEGLYKSGAIN 259


>gi|169796304|ref|YP_001714097.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Acinetobacter baumannii AYE]
 gi|215483763|ref|YP_002325988.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB307-0294]
 gi|294837744|ref|ZP_06782427.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp.
           6013113]
 gi|294859369|ref|ZP_06797138.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp.
           6013150]
 gi|301510868|ref|ZP_07236105.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB058]
 gi|169149231|emb|CAM87113.1| putative amino acid transport protein (ABC superfamily, peri_bind)
           [Acinetobacter baumannii AYE]
 gi|213987513|gb|ACJ57812.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter
           baumannii AB307-0294]
          Length = 288

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 8/224 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S +  IKK G ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++
Sbjct: 38  TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVE 97

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++   A  R   L++ ++DI+  N   T  R+    + F         G +  K   I+ 
Sbjct: 98  FVLTEAANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITD 155

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V+QL   ++ V  GTT +     +F   + +     +E+  E   A +  R  A   D  
Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGTALAHDNL 211

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            + A     + P+  V + ++  +  +APA+ +GD E  + ++ 
Sbjct: 212 LVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253


>gi|167741079|ref|ZP_02413853.1| putative glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 14]
          Length = 242

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 82/244 (33%), Gaps = 6/244 (2%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                +   +            L  I+  G +  G+    V F+         G+  +  
Sbjct: 1   MLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIGYSQEIA 60

Query: 65  RALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
             +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  +  ++F  
Sbjct: 61  LKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--ANQVSFSN 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I  +   
Sbjct: 119 SIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +     ++ R  A+  D   LY  K     P ++VI  +          + + D  +  +
Sbjct: 179 DAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDDPGFKQL 238

Query: 241 VSWT 244
               
Sbjct: 239 ADRV 242


>gi|253827634|ref|ZP_04870519.1| glutamine ABC transporter, periplasmic glutamine- binding protein
           glnH [Helicobacter canadensis MIT 98-5491]
 gi|253511040|gb|EES89699.1| glutamine ABC transporter, periplasmic glutamine- binding protein
           glnH [Helicobacter canadensis MIT 98-5491]
          Length = 273

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K F + +L  + L       +    ++ L  IK++G +  G+ +    F  +   G  
Sbjct: 1   MKKIFLIVMLGFLGLGLVGCGEAQQNASNSLEAIKQKGVITIGVFSDKPPFGFINKEGGN 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDV   R ++  +  D SK+++  + A  R   L+S ++D++  N   T  RE    +
Sbjct: 61  DGFDVQVSRQIAKDLLGDSSKVKFELVEAASRVEFLKSGKVDVIMANFTKTPEREAV--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F         G +  K   I S+  L G  + V  GTT +      F  ++ +   + +
Sbjct: 119 DFALPYMKVALGVVS-KDGAIKSIEDLKGKKLIVNKGTTADFY----FSKNHPEIELLKY 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  E   A +  R DA   D   ++A     + P   V +  + ++  +APA+ +GD E
Sbjct: 174 DQNTETFLALKDGRGDALAHDNLLVFAWA--KENPGFEVGITKLGNEDVIAPAVKKGDKE 231

Query: 237 WYNIVSW 243
               ++ 
Sbjct: 232 LLEWLNK 238


>gi|221197899|ref|ZP_03570945.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
 gi|221204543|ref|ZP_03577560.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221175400|gb|EEE07830.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221181831|gb|EEE14232.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
          Length = 338

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 93/249 (37%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M        L  + L     +  A  L DIKK G L+         F  V A      G 
Sbjct: 68  MKIHTLAKALVAVALIAAGTAAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGL 127

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 128 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITEERAK--QVDFS 182

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  I    GTT E+TL + F         + ++  
Sbjct: 183 IPYFSSGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 237

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I P  IS   +   + +G+T    
Sbjct: 238 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 297

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 298 FVNDTLKGL 306


>gi|33595038|ref|NP_882681.1| extracellular solute-binding protein [Bordetella parapertussis
           12822]
 gi|33599318|ref|NP_886878.1| extracellular solute-binding protein [Bordetella bronchiseptica
           RB50]
 gi|33565114|emb|CAE40067.1| probable extracellular solute-binding protein [Bordetella
           parapertussis]
 gi|33575364|emb|CAE30827.1| probable extracellular solute-binding protein [Bordetella
           bronchiseptica RB50]
          Length = 304

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80
             L  I   G +  G     + F+   AN    G+ +D C  +  A+      D  +++Y
Sbjct: 29  GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKY 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           LP+ +  R   + +  ID+   +T  TL R+  +   F   T+  G  FI  K   + ++
Sbjct: 89  LPVTSATRIPLMGNGTIDLECASTSNTLDRQKQVA--FSVTTFVTGNRFISLKSANLKTI 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++   +GT       +  +A ++    +  +   E        R  A+  D   
Sbjct: 147 DDLKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           LY L      P  + +  D +S  P A  + + D ++  +V  T  ++  + +  
Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYASGDFE 261


>gi|110801642|ref|YP_698644.1| amino acid ABC transporter (binding protein) [Clostridium
           perfringens SM101]
 gi|110682143|gb|ABG85513.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens SM101]
          Length = 262

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 93/237 (39%), Gaps = 9/237 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ ++ ++IL    F  ++  +   K    +  G++   V       NGD  GFD
Sbjct: 1   MKKLLFL-LIGIVILSILIFGCSSKKIETKKDSNKVIIGMDETFVPMGFKNENGDIVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +     +     K+ + P++   +   L +  ID++      T  RE    +AF  
Sbjct: 60  VDLAKEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTPEREK--KVAFTN 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178
               + Q  +      I+++  L G ++  Q G+++  TL +            P++F+ 
Sbjct: 115 SYLKNRQVIVTLSNSNINTLKDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDS 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +      A R DA   D   L    +  + PS+  +L + + +   +  + +   
Sbjct: 175 FNDCFMDLEAGRSDAVVCDE-ILAQYYIFKNDPSKFHVLTEDLGEESYSIGLRKNSN 230


>gi|154175491|ref|YP_001408468.1| acriflavine resistance protein [Campylobacter curvus 525.92]
 gi|112802700|gb|EAU00044.1| acriflavine resistance protein [Campylobacter curvus 525.92]
          Length = 288

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 109/280 (38%), Gaps = 25/280 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46
           M K     +  +  +F T                   A  +  IK+RG+++ G+ +    
Sbjct: 1   MRKFSIFFLAVIATVFLTGCGEEKGADKSASAPSEQKADAIAKIKERGYVRIGVFSDKPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V  +G  +G+D+ F + ++  +  D SK+++  + A  R   L + ++DI   N   
Sbjct: 61  FGYVDKDGKNQGYDIYFAKRIAKDMLGDESKVKFELVEAAGRVEVLTADKVDITLANFTK 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R  +  + F         G +  +   I SV +L G  + V  GTT +      F  
Sbjct: 121 TPER--AQVVDFALPYMKVSLGVVSPEGDVIKSVDELKGKKLIVNKGTTADAY----FTK 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +      + +++  E  AA    R  A   D + L+A     + P   V +  +     +
Sbjct: 175 NYPDIELVKYDQNTETFAALVDKRGAALAHDNALLFAWA--KENPGFVVGIEALGDVDVI 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
           APA+ +G+T     ++     ++   +     K+ +   K
Sbjct: 233 APAVKKGNTALLEWLN---NEIIELGKENFFHKDYDATLK 269


>gi|167628828|ref|YP_001679327.1| glutamine abc transporter, glutamine-binding protein
           [Heliobacterium modesticaldum Ice1]
 gi|167591568|gb|ABZ83316.1| glutamine abc transporter, glutamine-binding protein
           [Heliobacterium modesticaldum Ice1]
          Length = 267

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 16/254 (6%)

Query: 1   MYKDF---FVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K      + +L L +L   +       +  A        +  +K   +     F    
Sbjct: 1   MKKWVKTGLMGMLALGMLITAAGCGGGEKAAQAPTGDKSSAKKTIKVATDAAYAPFEWKD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+  GFD+D  +A+   +  D   I+ +         AL +K +D+L      T  R+
Sbjct: 61  EKGEIVGFDIDLIKAVGKELNAD---IELIDTPFDGIIAALTNKNVDMLISAMTITEKRK 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               + F    +   Q   + +   +     + G  + VQ  TT +  +           
Sbjct: 118 E--SIDFSKPYFVAVQAIAVKEGSPVKKFDDIKGLKVGVQNSTTGQYVVEKLLGEK--SD 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++              D    D   +      N      +I      K     A+ 
Sbjct: 174 KIFRYDTTPMAMNMLSNGDVDVVVADKPVVQHFLKNNPNAKMTLIDDASFEKEEYGIAVR 233

Query: 232 QGDTEWYNIVSWTH 245
           +G+TE    V+   
Sbjct: 234 KGETELLKQVNDAL 247


>gi|257866713|ref|ZP_05646366.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC30]
 gi|257872770|ref|ZP_05652423.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC10]
 gi|257876304|ref|ZP_05655957.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC20]
 gi|257800671|gb|EEV29699.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC30]
 gi|257806934|gb|EEV35756.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC10]
 gi|257810470|gb|EEV39290.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC20]
          Length = 267

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 8/249 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I    +    +  ++         +  +  G++   V        G+  GFD
Sbjct: 1   MKKLLLTGIAAASVFLLGACGSSNDTTTSAADKEEVIVGLDDTFVPMGFKDDQGNIVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+        +K+++ P++   +   L +  ID++      T  RE    + F  
Sbjct: 61  VDLATAILDLTG---TKVKFQPIDWSMKETELSNGTIDMIWNGYTKTAAREE--KVLFTD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177
               + Q  +  K  GI+S   + G  +  Q G++   T     +  K         ++ 
Sbjct: 116 TYMENKQVLVTAKASGITSFDDMEGKVLGAQEGSSGYETFNNQPEVLKDLVDGNDATLYA 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E        R D    D            +  +   +         A  + + D   
Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTGKTDDFNEIESPFEAEDFAVGVRKDDQAM 235

Query: 238 YNIVSWTHY 246
            + ++    
Sbjct: 236 ADKINDGLK 244


>gi|17546980|ref|NP_520382.1| putative amino-acid-binding periplasmic (PBP) ABC transporter
           protein [Ralstonia solanacearum GMI1000]
 gi|17429281|emb|CAD15968.1| putative amino-acid-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 308

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 89/241 (36%), Gaps = 8/241 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73
            + + +   L  IK+ G +  G     + F+   ++G+  G+  +    +       +  
Sbjct: 28  GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIVDGVKKKLGL 87

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++  P+ ++ R   LQ+  ID    +T   L R+  +   F    +  G   ++ K
Sbjct: 88  SGLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKK 145

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRC 191
             GI     L G ++   AGTT +  L           K + I+ +   +      + R 
Sbjct: 146 DAGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            A+  D   LY  +      ++ V++   +     A  + + D  +  +       ++T+
Sbjct: 206 VAFVMDEPLLYGERTKAKNQNDWVVVGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265

Query: 252 E 252
            
Sbjct: 266 G 266


>gi|213156960|ref|YP_002319005.1| ABC transporter, periplasmic binding protein [Acinetobacter
           baumannii AB0057]
 gi|301344841|ref|ZP_07225582.1| ABC transporter, periplasmic binding protein [Acinetobacter
           baumannii AB056]
 gi|301596930|ref|ZP_07241938.1| ABC transporter, periplasmic binding protein [Acinetobacter
           baumannii AB059]
 gi|213056120|gb|ACJ41022.1| ABC transporter, periplasmic binding protein [Acinetobacter
           baumannii AB0057]
          Length = 288

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 8/224 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S +  IKK G ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++
Sbjct: 38  TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVE 97

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++   A      L++ ++DI+  N   T  R+    + F         G +  K   I+ 
Sbjct: 98  FVLTEAANLVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITD 155

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V+QL   ++ V  GTT +     +F   + +     +E+  E   A +  R  A   D  
Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGTALAHDNL 211

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            + A     + P+  V + ++  +  +APA+ +GD E  + ++ 
Sbjct: 212 LVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253


>gi|187926114|ref|YP_001892459.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
 gi|241665602|ref|YP_002983961.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
 gi|187727868|gb|ACD29032.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
 gi|240867629|gb|ACS65289.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 295

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 106/307 (34%), Gaps = 65/307 (21%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79
             +A  L DIKK G L+ G+      F    A  G   G DVD+ + +++ +      ++
Sbjct: 43  QAHADKLDDIKKAGVLRVGVFDANPPFGYADAKTGQPVGLDVDYAQEIANKLGVK---LE 99

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
               N   R   L S ++DI++ N   T  R+    + F    +  G  FI  K   +  
Sbjct: 100 LRATNPANRVPLLTSGKVDIVAANFTITDERKK--QIEFSTPYFASGLQFIARKG-VLKQ 156

Query: 140 VSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              L   G  + V  GTT E TL D +         I ++       A R     A+  D
Sbjct: 157 PDDLKRDGIRLGVDKGTTQETTLRDGYPKA----RVIAYDDSPLALTALRTGAIQAFAQD 212

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            + L AL  T    SE  I P ++++  +   + +G+T+    +                
Sbjct: 213 GAKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETKLTATIDQILQ----------- 261

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
                                           GL KD         G  G ++DR  G +
Sbjct: 262 --------------------------------GLEKD---------GTAGRIYDRWFGPK 280

Query: 318 SELKIPR 324
           S   +PR
Sbjct: 281 SAAPLPR 287


>gi|295096060|emb|CBK85150.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 276

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 13/248 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57
           M   K     +  +      S    A  L DIK  G +K         F  + A   +  
Sbjct: 5   MKGFKKRAQVLGLVAAWGLVSAQAQADRLADIKAAGVVKVATFDANPPFGSIDAKTHEIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVDF +AL+ ++      ++ +  N   R   LQS + D++  +   T  R  +  + 
Sbjct: 65  GYDVDFAKALAKSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVID 119

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  GQ F++  K     +   S A I    GTT E  L   F     +   + ++
Sbjct: 120 FSTPYFVTGQQFLVPAKSP-DKLDDYSRARIGAVKGTTGEQALHQRFP----QSRVLSYD 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            +     A R     A T D + L  L       ++  ILPD++SK  +   + +G+T  
Sbjct: 175 DIPLALTALRNGNVQAITQDSTILAGLLAQAPDKADFKILPDLLSKEEIGVGVKKGETAL 234

Query: 238 YNIVSWTH 245
              V+   
Sbjct: 235 LRAVNDEL 242


>gi|239503575|ref|ZP_04662885.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii AB900]
 gi|260555371|ref|ZP_05827592.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii ATCC 19606]
 gi|260411913|gb|EEX05210.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii ATCC 19606]
          Length = 288

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 8/224 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S +  IKK G ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++
Sbjct: 38  TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVE 97

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++   A  R   L++ ++DI+  N   T  R+    + F         G +  K   I+ 
Sbjct: 98  FVLTEAANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITD 155

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V+QL   ++ V  GTT +     +F   + +     +E+  E   A +  R  A   D  
Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNL 211

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            + A     + P+  V + ++  +  +APA+ +GD E  + ++ 
Sbjct: 212 LVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253


>gi|111020580|ref|YP_703552.1| glutamate binding protein solute binding protein family
           [Rhodococcus jostii RHA1]
 gi|110820110|gb|ABG95394.1| probable glutamate binding protein, bacterial solute binding
           protein family protein [Rhodococcus jostii RHA1]
          Length = 336

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 13/239 (5%)

Query: 11  CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRA 66
            L  L   +        S L +I  RG L  GI+     F+      G   GFDVD    
Sbjct: 74  ALASLRPAATPDVRAPGSSLAEITARGRLIVGIDQNTNLFSFRDPTTGMLMGFDVDVAGE 133

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +F DPS++++  L + +RF ALQ++ +D++ ++T  T  R  S  +AF  + +   
Sbjct: 134 MARDLFGDPSRVEFRLLTSGDRFDALQNEDVDLVVKSTSITCER--SERVAFSTVYFQAY 191

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           Q  ++ K  GIS  + L+G  +C    TT+  T+             +     ++     
Sbjct: 192 QRLLVPKGSGISGPADLAGKRVCTAGDTTSLDTVRRVQPEA----TIVAVPDWDDCLVVL 247

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +  + DA + D S L  L   +       I+   +   P    + +   +    V+ T 
Sbjct: 248 QQRQADAASTDDSILAGLAAQDPN---LEIVGPPLESEPYGIGVNKNHDDLVRFVNGTL 303


>gi|319763771|ref|YP_004127708.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|330823965|ref|YP_004387268.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|317118332|gb|ADV00821.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|329309337|gb|AEB83752.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 296

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 98/248 (39%), Gaps = 4/248 (1%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             +   +L   + +     L  +K  G +  G+       + +  +  + G+ V+ C  +
Sbjct: 9   GAVLATLLHLPAIAQPQGTLEKVKASGAIVLGVREASAPLSYLLGSSQYVGYHVELCERI 68

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +F     ++Y  + ++ R   +Q+  +D+   +T  T  R+    + F   TY    
Sbjct: 69  AKNLFPQAQ-VRYQAVTSQNRMPLVQNGTVDLECGSTSNTASRKE--QVDFANTTYITEA 125

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            + + K  GI S  QL+G +I    GTT    L    +   +K++ ++ +   E      
Sbjct: 126 RYAVKKSSGIESTGQLAGKTIVTTTGTTLVPRLRKLERE-GLKFNLVMAKDHAESMLMVA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
             R DA+  D + L         P +  I+   + + P+A  + + D  +   V      
Sbjct: 185 QGRADAFAMDDNTLAGNIAMLQNPQDFRIVGTPLGREPIALMLRRNDAAFKQAVDAEISK 244

Query: 248 MVTAEELG 255
           ++ + EL 
Sbjct: 245 LIRSGELR 252


>gi|210135331|ref|YP_002301770.1| glutamine ABC transporter periplasmic glutamine-binding protein
           [Helicobacter pylori P12]
 gi|210133299|gb|ACJ08290.1| glutamine ABC transporter periplasmic glutamine-binding protein
           [Helicobacter pylori P12]
          Length = 277

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKNKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEMDSLISSDFLK 254


>gi|308063955|gb|ADO05842.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori Sat464]
          Length = 277

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALAFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELENKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            +     ++++++ L 
Sbjct: 239 WLDNEMDSLISSDFLK 254


>gi|160898239|ref|YP_001563821.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160363823|gb|ABX35436.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 305

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 93/238 (39%), Gaps = 6/238 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSK 77
            ++  L  I++ G +  G      GF+ +  +    G+ +D CR +     + +     +
Sbjct: 32  QDSGTLAKIQQAGAITLGYRESSFGFSYLDGDLKPVGYSMDICRRIVDEIKAQLKLPALQ 91

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y  + +  R   + +  +D+   +T   + R+  +   F P  +      ++    G+
Sbjct: 92  VRYQAVTSANRIPLVANGTVDLECGSTTNLVERQKQVA--FSPDIFRYNVRMLVRADSGL 149

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            SV+ L G ++   AGTT+   L +  +  N+    +  +   +      + R  A+  D
Sbjct: 150 RSVADLQGKTVATTAGTTSFRLLREADRGRNLDITNLSGKDHSDSFMLVESGRAQAFVLD 209

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              L         P +++I  + +     A  + + D  +  IV      M+ + E+ 
Sbjct: 210 DILLAGQIANAKNPQDYLITGESLRTENQALMLRKDDAGFKAIVDRVVTGMMQSGEME 267


>gi|134280643|ref|ZP_01767353.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 305]
 gi|134247665|gb|EBA47749.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 305]
          Length = 299

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 8/261 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +      +   +            L  I+    +  G+    V F+         G
Sbjct: 2   MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTRVVTLGVRESSVPFSYYDQQQRTIG 61

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  +    +   I          ++ +P+ ++ R   +Q+  +D+   +T  T  R  + 
Sbjct: 62  YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            ++F    +  G   I+ K  G+     L+G ++   AGTT E  L  +     M    I
Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     ++ R  A+  D   LY  K     P ++VI  +          + + D
Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  +       M  + E  
Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260


>gi|116629031|ref|YP_814203.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           gasseri ATCC 33323]
 gi|311111174|ref|ZP_07712571.1| amino acid ABC transporter, amino acid-binding protein
           [Lactobacillus gasseri MV-22]
 gi|116094613|gb|ABJ59765.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|311066328|gb|EFQ46668.1| amino acid ABC transporter, amino acid-binding protein
           [Lactobacillus gasseri MV-22]
          Length = 263

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 6/246 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            +  +        AS    IK+RG L  G++   V     + NG   GFDVD   A+   
Sbjct: 15  VITSVGLAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKE 74

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           I   P    +  ++   +   L++  ID++      T  R     +AF      + Q  +
Sbjct: 75  IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSRPYLENDQILV 129

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAH 189
             KK+ I++  Q+ G  + VQ G++    L +Y      +    ++++         +A 
Sbjct: 130 TRKKEQINNYCQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSTVLYDTYNNAFIDLKAG 189

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R D    D          +    E             +  I + D    + ++     + 
Sbjct: 190 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDQILKDKINQALDHLE 249

Query: 250 TAEELG 255
              EL 
Sbjct: 250 KTGELE 255


>gi|317009782|gb|ADU80362.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori India7]
          Length = 277

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|317014559|gb|ADU81995.1| amino acid ABC transporter [Helicobacter pylori Gambia94/24]
          Length = 277

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G+++G+
Sbjct: 8   KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREAV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|225374847|ref|ZP_03752068.1| hypothetical protein ROSEINA2194_00470 [Roseburia inulinivorans DSM
           16841]
 gi|225213308|gb|EEG95662.1| hypothetical protein ROSEINA2194_00470 [Roseburia inulinivorans DSM
           16841]
          Length = 267

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 88/254 (34%), Gaps = 12/254 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58
           M K   + ++  + L  T+   +       +  G      G +     F  V  +G++ G
Sbjct: 1   MKKFMALLLVAGMTLSLTACGGSTDTAKTDQADGKDTFTVGFDQDFPPFGYVGDDGEFTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++     ++ +      I   P++   + + L++  ID +          +      +
Sbjct: 61  FDIEMATECAARMGKK---IVLQPIDWDAKDMELEAGTIDCIWNGFTMNGRED---QYTW 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVF 176
                 + Q  ++ K  GI++++ L+G  + VQ  +  E  L D   A  M      +  
Sbjct: 115 TDPYMDNSQVVVVKKDSGINTLADLAGKVVEVQKESAAETALNDEEHADLMASFAQLLSV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                      +   DA   D     A      +  ++ IL + IS    A     G+T 
Sbjct: 175 GEYNTAFMDLESGAVDAVAID--IGVAQFQIEGKEDQYQILDETISSEQYAVGFFLGNTA 232

Query: 237 WYNIVSWTHYAMVT 250
             + V  T   MV 
Sbjct: 233 LRDEVQSTLLEMVE 246


>gi|295677112|ref|YP_003605636.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295436955|gb|ADG16125.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 329

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 86/251 (34%), Gaps = 9/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M++       C ++ F      +     L  I   G +  G+    + F+         G
Sbjct: 33  MHRVLLALTACGVVAFAGPARADELTGTLKKIHDDGVVVLGVREASIPFSYFDGK-RTVG 91

Query: 59  FDVDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +       +       +     ++  + + +  R   L + QID+   +T  T+ RE   
Sbjct: 92  YSQAIAMQIVDEIRKTLGMTQLRVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERE--N 149

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             AF    +      I  K  GI+    L+G  +   AGT+ E  L        +    +
Sbjct: 150 VAAFSDSFFQYAVRMITRKNSGITDFRDLAGKPVVTTAGTSDERLLRSLNTEKQLNMRIM 209

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                +E  +A +  R  A+  D   +Y  K T+  P + ++    +     A    +GD
Sbjct: 210 SARDHQEAFSAMKDGRAVAFVMDEPIVYGFKATDPHPDDFIVTGTPLGYEVYACMFRKGD 269

Query: 235 TEWYNIVSWTH 245
             +  +V+   
Sbjct: 270 ESFRALVNRVI 280


>gi|299066140|emb|CBJ37323.1| putative amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 284

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 12/251 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63
                 +  +   +    A  L D+KK+G L CG+      F+ +K   + +  G+DVD 
Sbjct: 13  LACAAIVAAVTLAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 72

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C A++ ++   P       L    R   LQ  ++D+L+ +      RE    + F   T+
Sbjct: 73  CHAVAKSLGVKP---VLKQLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSLSTF 127

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             GQ  ++ K  GI+S++QL G  +    G+T E  +    K        + F+   +  
Sbjct: 128 VTGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIGKAIK----NADIVSFDNSPQAL 183

Query: 184 AAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A +  +  AY  D + L            ++ +LP  +S    A  + + +  +   V+
Sbjct: 184 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYALLPQNLSTEHFALGLRKNEPAFREQVN 243

Query: 243 WTHYAMVTAEE 253
                +  + E
Sbjct: 244 KVLRGLEASGE 254


>gi|311069226|ref|YP_003974149.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus
           atrophaeus 1942]
 gi|310869743|gb|ADP33218.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus
           atrophaeus 1942]
          Length = 275

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 11/233 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDD 74
              +   + + L  IK    +  G+ T    F     + GD +GFD+D  + L+  I  D
Sbjct: 30  SSGTSKDSKNTLEAIKDNDKIVFGVKTDTRLFGLKNPSSGDIEGFDIDIAKQLAKDIAGD 89

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +K ++  + +K R   LQ+  ID +      T  R+    + F  + +  GQ  ++ K 
Sbjct: 90  ENKAEFKEVTSKTRIPMLQNGDIDAIVATMTITDERKK--EVDFSNVYFEAGQSLLVKKG 147

Query: 135 KGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             I SV  L  G  +    G+T+   + +           + FE   E   A ++ + +A
Sbjct: 148 SAIKSVKDLKKGTKVLAVKGSTSSQNIREKAP----NATVLEFENYAEAFTALKSGQGEA 203

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            T D + LY +   N    ++ +     +  P   A+ +G +E    ++ +  
Sbjct: 204 LTTDNAILYGMADENK---DYQLTGKTFTDEPYGIAVKKGQSELVKEINASLK 253


>gi|238752607|ref|ZP_04614080.1| Glutamate/aspartate periplasmic-binding protein [Yersinia rohdei
           ATCC 43380]
 gi|238709198|gb|EEQ01443.1| Glutamate/aspartate periplasmic-binding protein [Yersinia rohdei
           ATCC 43380]
          Length = 311

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 6/224 (2%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYL 81
            L  IK  G +  G     V F+         G+  D+   +  AI         +++ +
Sbjct: 41  TLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVKLI 100

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+ ++ R   LQ+   D    +T   L R+      F    +  G   +  K   I    
Sbjct: 101 PITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSNTIFVVGTRLLTKKDSNIKDFK 158

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+  ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D + L
Sbjct: 159 DLADKAVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALL 218

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +    +P +  I+    S+      + + D  +  ++  T 
Sbjct: 219 AGERAKAKKPDQWEIVGIPQSQEAYGCMLRKDDPAFKALLDETI 262


>gi|116326670|ref|YP_796444.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|116106488|gb|ABJ71629.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei ATCC
           334]
          Length = 284

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 26/261 (9%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLV 45
           M K  F      VS+   ++L  T    +            +  IKK G ++  +   L 
Sbjct: 1   MKKRLFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            +  V  +G   G+DV     ++  +      ++++ +NA  R  AL S ++D++  N  
Sbjct: 61  PYGWVNKDGKRVGYDVTLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFT 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T  R     + F         G +  K K I+  SQL G ++ V  GTT E    +YF 
Sbjct: 118 VTPER--KQVIDFAKPYMKVSVGVVSPKNKAITKASQLKGKNVIVTKGTTAE----NYFT 171

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           +       + F+   +   A +  R  A   D S LYA   + D PS  V +  I  KS 
Sbjct: 172 SKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKDNPSYTVGIKSIGPKSY 229

Query: 226 LAPAIIQGDTEWYNIVSWTHY 246
           +APA+ +G+    N  +    
Sbjct: 230 IAPAVKKGNKSLLNWTNKEIN 250


>gi|134295676|ref|YP_001119411.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134138833|gb|ABO54576.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 276

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 91/249 (36%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M      + L    L       +A  L DIKK G L+         F  V A      G 
Sbjct: 6   MKFHTLATWLVGAALVTAGTLAHADRLDDIKKAGVLRVATFDSNPPFGFVDAKSHHIVGL 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 66  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  +    GTT E+TL D F         + ++  
Sbjct: 121 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLRDKFP----GATIVAYDDT 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+     
Sbjct: 176 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGEARLLG 235

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 236 FVNDTLKGL 244


>gi|327399612|ref|YP_004340481.1| ABC transporter periplasmic subunit family 3 [Hippea maritima DSM
           10411]
 gi|327182241|gb|AEA34422.1| ABC-type transporter, periplasmic subunit family 3 [Hippea maritima
           DSM 10411]
          Length = 275

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 18/255 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M + F F+  +  + +  +  S  A       S L  I+KRG L+ G+N G + F     
Sbjct: 1   MKRLFGFLVFVVSLFMLVSFTSRAADINLWHNSTLYKIQKRGVLRVGLNAGYMPFEMRSK 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G   GFDVD  + ++ A+      ++ +  +      AL + + DI+      T  R  
Sbjct: 61  TGKIIGFDVDMAKLMAKAMGVK---LKIVNTDWDGIIPALMTNKFDIIMSGMTITQKR-- 115

Query: 113 SLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +L + F       GQ  +++KK    I S   L+     V     T    A   K +  K
Sbjct: 116 NLKVNFADPYIVVGQTVLVNKKWAGKIKSYKDLNDPKFTVTVMLGTTGDFA--AKKYISK 173

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                F+  EE        R DA+  D     ++  +N    + + L    +  PL  AI
Sbjct: 174 AKIQEFQTEEEAVMQVMQGRADAFVYDKP-YESIFYSNKGKGKLIFLDKPFTYEPLGWAI 232

Query: 231 IQGDTEWYNIVSWTH 245
            +GD ++ N ++   
Sbjct: 233 NKGDPDFLNWLNNFL 247


>gi|42518674|ref|NP_964604.1| glutamine ABC transporter solute-binding component [Lactobacillus
           johnsonii NCC 533]
 gi|41582960|gb|AAS08570.1| glutamine ABC transporter solute-binding component [Lactobacillus
           johnsonii NCC 533]
          Length = 273

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 14/250 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +   FF   + L  +F  S       ++  ++KK   +  G+      F  +    G 
Sbjct: 1   MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF+VD   AL+  I    +K  ++   AK +   L++  ID +      T  R+    
Sbjct: 61  IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    ++ GQ  ++     I S+  ++G +     GTT    +  +          + 
Sbjct: 119 IDFSDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKAK----VLE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A +  A T D   L  +   N     + ++    +K P   A+ +G  
Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTKEPYGIAVNKGQI 231

Query: 236 EWYNIVSWTH 245
           +  N ++   
Sbjct: 232 QMKNAINRAL 241


>gi|170702190|ref|ZP_02893096.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170132899|gb|EDT01321.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 278

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 90/249 (36%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L    L       +A  L DIKK G L+         F  V        G 
Sbjct: 8   MKFHTLATWLVGAALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDGKSNHIVGL 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 68  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+   +    GTT E+TL + +         + ++  
Sbjct: 123 IPYFSSGQQFLAKKG-VLKSADQLNSLRVGADKGTTNEITLREKYPKA----TIVAYDDT 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 178 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 237

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 238 FVNDTLKGL 246


>gi|208435066|ref|YP_002266732.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori G27]
 gi|208432995|gb|ACI27866.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori G27]
          Length = 277

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|324993850|gb|EGC25769.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK405]
 gi|324994829|gb|EGC26742.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK678]
 gi|325687270|gb|EGD29292.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK72]
          Length = 270

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 11/259 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
            +   + S+ +  +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F P  Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTPPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKIYDKYDLKPSASTDD 270


>gi|241661990|ref|YP_002980350.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240864017|gb|ACS61678.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 302

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 90/248 (36%), Gaps = 13/248 (5%)

Query: 16  FFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----S 69
           F ++         L  IK  G +  G+    + F+         G+  D    ++     
Sbjct: 20  FGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKK 79

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +     K+  +P+ ++ R   LQ+  ID+   +T   L R+     +F    +  G   
Sbjct: 80  QLGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK--QASFTNTIFIIGTRI 137

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K  G+   + L G ++   AGTT+E  L        M  + I  +   +      + 
Sbjct: 138 MVKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESG 197

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---- 245
           R  A+  D + LY  +     P++ V++    S+      + + D  +  +   T     
Sbjct: 198 RAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM 257

Query: 246 -YAMVTAE 252
               + AE
Sbjct: 258 KDGTINAE 265


>gi|94309344|ref|YP_582554.1| extracellular solute-binding protein [Cupriavidus metallidurans
           CH34]
 gi|93353196|gb|ABF07285.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Cupriavidus metallidurans
           CH34]
 gi|222871736|gb|EEF08867.1| predicted protein [Populus trichocarpa]
          Length = 299

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 92/252 (36%), Gaps = 8/252 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                ++   +L   + +       L  IK  G +  G+    + F          G+  
Sbjct: 5   KLAGLMIAAGVLCGNAQAAEQLTGTLQKIKDTGVITLGVRDSSIPFNYNLGGVRQVGYSY 64

Query: 62  DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D       A+   +     +++ +P+ ++ R   LQ+  IDI   +T   L R+    ++
Sbjct: 65  DINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQK--QVS 122

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   ++ K  GI   + L G ++   AGTT+E  L        +  + I  +
Sbjct: 123 FTDTIFIIGTRIMVKKDGGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTK 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R  A+  D + LY  +     P++ +++    S+      I + D  +
Sbjct: 183 DHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPNDWIVVGKPQSREAYGCMIRKDDAPF 242

Query: 238 YNIVSWTHYAMV 249
             +       ++
Sbjct: 243 KKVSDQVIAGLM 254


>gi|317053314|ref|YP_004119081.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316953053|gb|ADU72525.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 275

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 94/248 (37%), Gaps = 13/248 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60
            K+     + ++     S + +A  L DIK  G +K         F  + A   +  G+D
Sbjct: 9   KKNILT--IAVLATLLVSAAASADQLADIKAAGVIKVATFDANPPFGSIDAKSHELVGYD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF +AL++++      ++ +  N   R   LQS + D++  +   T  R  +  + F  
Sbjct: 67  VDFAKALANSLGVK---LKLVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFST 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  GQ F++        + + S A I    GTT E  L   +         + ++ + 
Sbjct: 122 PYFVTGQQFLVPATSPDQ-LDKYSHARIGAVKGTTGEQALHQRYPQA----RVLAYDDIP 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A R     A T D + L  L           ILP ++SK  +   + +        
Sbjct: 177 LALTALRNGNVQAITQDSTILAGLLAAAPDKENFKILPALLSKEEIGVGVKKDQPALLQA 236

Query: 241 VSWTHYAM 248
           V+    A+
Sbjct: 237 VNDELLAL 244


>gi|308513289|ref|NP_951857.2| amino acid ABC transporter periplasmic amino acid-binding protein
           [Geobacter sulfurreducens PCA]
 gi|41152668|gb|AAR34130.2| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Geobacter sulfurreducens PCA]
 gi|298504920|gb|ADI83643.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Geobacter sulfurreducens KN400]
          Length = 263

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 79/246 (32%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L++ F  +          +K  G L  G++          A+G   GFD
Sbjct: 1   MKKLVLLMVSALLVAFAATAFAADGSWNRVKSAGKLVIGLDDAFPPMGYRDASGKLIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     KI++ P        +L SK+ D +      T  R   +   F  
Sbjct: 61  IDAAEEVGKRLG---IKIEWQPTAWDGVIHSLNSKKFDAIWNGMTITDERAKQVA--FTK 115

Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               D     +   +K    ++ L    I  Q G++    +     A         +E  
Sbjct: 116 PYIMDGQIAVVKFSEKRFKKIADLKNVKIGAQKGSSALNAVKKLPTA---PAELKEYEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      A R D    D            RP +  ++P  ISK P   A  + D E   
Sbjct: 173 PKALLDLEAGRIDVVVIDNVT--GRDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELRE 230

Query: 240 IVSWTH 245
            V  T 
Sbjct: 231 KVQKTL 236


>gi|300782280|ref|YP_003762571.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299791794|gb|ADJ42169.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 314

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 99/239 (41%), Gaps = 11/239 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67
           +  L+    ++   ++S + DI+KRG L  G++     F      +G+ +GFD+D   A+
Sbjct: 53  LASLVPASSSTTVPDSSTMSDIRKRGKLIAGVDQTTYLFGFRNPTSGNLEGFDIDMVNAV 112

Query: 68  SSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           + AIF      +Q+  + + +R   L+  Q+DI+ R    T  R+    + F  + Y  G
Sbjct: 113 AKAIFGSADGHVQFRAIPSSQREEVLKKHQVDIVVRTYSITCARKK--DVEFSSVYYVAG 170

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           Q  ++ K+     +S LSG  +C    +T+   +A           P+  +   +     
Sbjct: 171 QKILVPKESKAQKLSDLSGKRVCATKKSTSLAKIATDAAK----PVPVSVDNWSDCLVML 226

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +  + DA + D + L  +   +       +  + +++      + +   +    V+   
Sbjct: 227 QQGQVDAVSTDDTILAGMAAQDS---TLEVRGEPLTQENYGIGVPKDRPDLVRYVNAVL 282


>gi|238853598|ref|ZP_04643967.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus gasseri
           202-4]
 gi|238833742|gb|EEQ26010.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus gasseri
           202-4]
          Length = 263

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 85/246 (34%), Gaps = 6/246 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            +  +        AS    IK+RG L  G++   V     + NG   GFDVD   A+   
Sbjct: 15  VITSVGLAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKE 74

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           I   P    +  ++   +   L++  ID++      T  R     +AF      + Q  +
Sbjct: 75  IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSRPYLENDQILV 129

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRAH 189
             KK+ I+S  Q+ G  + VQ G++    L +Y      +    ++++         +A 
Sbjct: 130 TRKKEQINSYRQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSAVLYDTYNNAFIDLKAG 189

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R D    D          +    E             +  I + D    + ++     + 
Sbjct: 190 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDQILKDKINQALDHLE 249

Query: 250 TAEELG 255
              EL 
Sbjct: 250 KTGELE 255


>gi|300690821|ref|YP_003751816.1| glutamate/aspartate ABC transporter,periplasmic binding subunit
           [Ralstonia solanacearum PSI07]
 gi|299077881|emb|CBJ50520.1| glutamate/aspartate ABC transporter,periplasmic binding subunit
           [Ralstonia solanacearum PSI07]
          Length = 308

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 88/243 (36%), Gaps = 8/243 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAI 71
              + + +   L  I++ G +  G     + F+   ++G+  G+  +    +       +
Sbjct: 26  STGAQAQSNDTLAKIRQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIIDGVKKKL 85

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                +++  P+ ++ R   LQ+  ID    +T   L R+  +   F    +  G   ++
Sbjct: 86  GLPSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLV 143

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAH 189
            K  GI     L G ++   AGTT +  L           K + I+ +   +      + 
Sbjct: 144 KKDGGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESG 203

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R  A+  D   LY  +       + +++   +     A  + + D  +  +       ++
Sbjct: 204 RAVAFVMDEPLLYGERTKAKNQDDWIVVGKPLQTETYACMMRKDDPAFKKVADDVIADLM 263

Query: 250 TAE 252
           T+ 
Sbjct: 264 TSG 266


>gi|206896514|ref|YP_002246907.1| glutamine-binding protein [Coprothermobacter proteolyticus DSM
           5265]
 gi|206739131|gb|ACI18209.1| glutamine-binding protein [Coprothermobacter proteolyticus DSM
           5265]
          Length = 254

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F + ++   IL   S   +A+          L  G          +  NG++ GFD
Sbjct: 1   MKRTFVLLLVVGAILLGCSSQQSANT---------LVVGTAADFPPLEFIDENGNFAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A++  I  +   +++   +      +LQ+ + D +      T  R     + F  
Sbjct: 52  IELMNAIAEKIGYE---VKWENADFAGLVASLQTGKYDAVISAMTITASR--QEEVDFSR 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  ++ +    I S   L+  +I VQ GTT EL   +             +E  
Sbjct: 107 PYFRSDQAVVVQESNVGILSREDLADKTIGVQLGTTGELLARELVSDKGG---VYTYESP 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D+       L N       +   I ++     A+ +G+TE   
Sbjct: 164 DQAFLDLNTGRLDAVVNDLPVSSYFLLRNPNLP-LKVAFTIETEEYYGIAVKKGNTELVE 222

Query: 240 IVSWTH 245
            ++   
Sbjct: 223 KINNAL 228


>gi|290963272|ref|YP_003494454.1| amino acid ABC transporter substrate-binding protein [Streptomyces
           scabiei 87.22]
 gi|260652798|emb|CBG75931.1| putative amino acid ABC transporter solute-binding protein
           [Streptomyces scabiei 87.22]
          Length = 274

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGD 55
           M K    + L   +++L  ++ +++      +    KR  L  G+     G       G 
Sbjct: 1   MSKRLISAALTSAIVVLSASACTSSDDTGSSVLDAAKRDKLVIGVKADQPGLGLRTPEGT 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D    ++  +  D   I +    +  R   LQ  Q+D++         R+    
Sbjct: 61  FTGFDIDVATYVAKELGVDKKDITFKEAVSANREAFLQQGQVDMVVATYSINDARKE--K 118

Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           ++F       GQ  ++ K    I+    L+G  +C  AG+T+   + + +          
Sbjct: 119 VSFAGPYLVAGQDLLVRKDNKDITGPESLNGKKLCSVAGSTSAQLIKEKYAE---DAQLQ 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                        + + DA T D S LY        P +  +L    S+      + + D
Sbjct: 176 EERTYSACVDRVLSGQLDAVTTDNSILYGYAAQ--HPGKLKVLDSPFSQENYGIGLKKDD 233

Query: 235 TEWYNIVSWTH 245
            +    V+   
Sbjct: 234 KKGREAVNDAL 244


>gi|166367483|ref|YP_001659756.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
 gi|166089856|dbj|BAG04564.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
          Length = 299

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 99/256 (38%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   V  + + +   ++ S+ A  +   I+K G +  G     + F  V + G W G+
Sbjct: 1   MKRTLAVMTMTVALTLTSNHSSLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +          P K++ + +  + RF  L++  IDI   +T +T  RE    +
Sbjct: 61  SLDMLELIRKETERKLGKPIKLKIVEITPQNRFEKLKTGVIDIECGSTTFTWKRE--NEV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K   +  +  L+G  I V A TT E  +     A       +  
Sbjct: 119 DFSVSYFAGGTQLLTRKGSNLDDIGSLAGRRIGVIANTTNEAVIKTQQPAA----ILVKV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E      A   D +  D   L  L+ +   P+   I+P    +    A  + + D+
Sbjct: 175 KNRGEGLQKLEAGEIDGFASDGITLEGLRKSAKNPNNLAIVPSYPYAYESYACTLPENDS 234

Query: 236 EWYNIVSWTHYAMVTA 251
           +W + V++T    +  
Sbjct: 235 KWRDTVNYTLLKFMEG 250


>gi|227890386|ref|ZP_04008191.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849200|gb|EEJ59286.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus johnsonii ATCC 33200]
          Length = 273

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 14/250 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +   FF   + L  +F  S       ++  ++KK   +  G+      F  +    G 
Sbjct: 1   MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF+VD   AL+  I    +K  ++   AK +   L++  ID +      T  R+    
Sbjct: 61  IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    ++ GQ  ++     I S+  ++G +     GTT    +  +          + 
Sbjct: 119 IDFSDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKAK----VLE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A +  A T D   L  +   N     + ++    +  P   A+ +G T
Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQT 231

Query: 236 EWYNIVSWTH 245
           +  N ++   
Sbjct: 232 QMRNAINRAL 241


>gi|300690825|ref|YP_003751820.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299077885|emb|CBJ50524.1| putative amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 285

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 99/251 (39%), Gaps = 12/251 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63
                 +  +   +    A  L DIKK+G L CG+      F+ +K   + +  G+DVD 
Sbjct: 14  LACAAIVAAVTLAAVPAKADQLADIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 73

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C A++  +   P       L    R   LQ  ++D+L+ +      RE    + F   T+
Sbjct: 74  CNAVAKRLGVKP---VLKQLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSVSTF 128

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             GQ  ++ K  GI+S++QL G  +    G+T E  +A   K        + F+   +  
Sbjct: 129 ITGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIAKTVK----NADIVSFDNSPQAL 184

Query: 184 AAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A +  +  AY  D + L            ++ I+   +S   LA  + + +      V+
Sbjct: 185 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYAIVAQNLSTEHLALGLRKNEPALREQVN 244

Query: 243 WTHYAMVTAEE 253
                +  + E
Sbjct: 245 KVLLDLEASGE 255


>gi|22536881|ref|NP_687732.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 2603V/R]
 gi|76788013|ref|YP_329465.1| polar amino acid ABC transporter amino acid-binding protein
           [Streptococcus agalactiae A909]
 gi|76798186|ref|ZP_00780437.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 18RS21]
 gi|22533731|gb|AAM99604.1|AE014224_7 amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 2603V/R]
 gi|76563070|gb|ABA45654.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus agalactiae A909]
 gi|76586449|gb|EAO62956.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 18RS21]
          Length = 266

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 2   YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
            +  F  + C+ I L F   ST+A+ L +IKK G LK G+   +  F    A    ++G 
Sbjct: 5   KRLTFYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEGM 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  + ++ ++   P    ++P  A+ R   + + QIDIL      T  R+ +  +   
Sbjct: 65  EIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYNI--S 119

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y D  GF++ K   I ++ +L G  I V  G TT++ L  Y K H +K+        
Sbjct: 120 KAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQLGSF 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E+  +  A+R DA++ D S L              IL +  +      A  + D     
Sbjct: 180 PELAISLYANRIDAFSVDKSILSGYLS-----PHTTILKEGFNTQEYGIATSKQDKVLIP 234

Query: 240 IVSWTHYAM 248
            V+    + 
Sbjct: 235 YVNKLLVSW 243


>gi|55821555|ref|YP_139997.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737540|gb|AAV61182.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
          Length = 284

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 20/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
            K F +  L   ++  T+          +  A  + +IKK G L+  +      F  V  
Sbjct: 5   KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G+D+     L+  +   P   +Y+ ++A  R   L S ++DI   N   T  R+ 
Sbjct: 65  KGAYQGYDIGLGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G +  K K I  V +L G ++ V  GTT E      F+ +     
Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +++  +   A    R DA++ D + + A     +     V +  +     +APA+ +
Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAPAVQK 233

Query: 233 GDTEWYNIVSW 243
           G+ E  + ++ 
Sbjct: 234 GNKELLDFINK 244


>gi|257899739|ref|ZP_05679392.1| extracellular solute-binding protein [Enterococcus faecium Com15]
 gi|257837651|gb|EEV62725.1| extracellular solute-binding protein [Enterococcus faecium Com15]
          Length = 271

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F+  L + +L F   S    +A     I +   +  G++   V       +G   
Sbjct: 1   MKKISFLFALFVGLLLFAGCSNKKASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+          + + P++   +   L +  ID++      T  RE    + 
Sbjct: 61  GFDIDLAKAVFEQY---RITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  I  K+ GI+S  Q+    +  Q G++         +  K        +
Sbjct: 116 FTKPYMENDQVLITPKESGITSFEQMKNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++   E     ++ R D    D           +   +  +          A  + + D
Sbjct: 176 LYDSFNEALIDLKSGRIDGLLMDKVYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSD 235

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
                 ++     +    E  
Sbjct: 236 DTLVKKINEAFDRLEKTGEFQ 256


>gi|317012953|gb|ADU83561.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori Lithuania75]
          Length = 277

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|15896854|ref|NP_350203.1| amino acid ABC transporter periplasmic-binding protein [Clostridium
           acetobutylicum ATCC 824]
 gi|15026720|gb|AAK81543.1|AE007858_4 Amino acid (probably glutamine) ABC transporter, periplasmic
           binding protein component [Clostridium acetobutylicum
           ATCC 824]
 gi|325511028|gb|ADZ22664.1| Amino acid (probably glutamine) ABC transporter, periplasmic
           binding protein component [Clostridium acetobutylicum EA
           2018]
          Length = 264

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 19/254 (7%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M K  F      V  L +     ++  +    L  +KK   +  GI+           A 
Sbjct: 1   MLKKIFSLSVVLVLTLAIFTGCTSATVSKDDSLERVKKAKEIVIGIDDTYPPMEFKDKAT 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GFD+D   A++  +       +++P +    FLAL+SK+ D++  +   T  R+  
Sbjct: 61  GKVSGFDIDMANAIAKKLGVKT---KFVPNSFDGIFLALKSKKFDVVHSSISITDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
             + F     + G    +      I +    +   +  + GTT +  LA           
Sbjct: 117 -AMIFSDPYIYGGNAIFVKSDNTTIKNEKDFNNQVVGCEVGTTAQDVLAKISGIK----E 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +  + +     +  R  A   D   +         P +   L   +++ P+  A  +
Sbjct: 172 VKKYNAMTDAFLDLQNGRIAAVVSDP--MVGDYYNVTDPGKFKKLESSLTQEPIGVAFRK 229

Query: 233 GDTEWYNIVSWTHY 246
            D    +  +    
Sbjct: 230 EDKSLRDAYNKAIK 243


>gi|254779722|ref|YP_003057828.1| ABC-type transport system, periplasmic component; putative
           amino-acid transporter GlnH; putative signal peptide
           [Helicobacter pylori B38]
 gi|254001634|emb|CAX29767.1| ABC-type transport system, periplasmic component; putative
           amino-acid transporter GlnH; putative signal peptide
           [Helicobacter pylori B38]
          Length = 287

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 18  KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGILKVGVFSDKPPFGSVDSKGKYQGY 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 78  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKV--VDFA 135

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 136 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 191 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 249 WLNNEMDSLISSDFLK 264


>gi|242280218|ref|YP_002992347.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242123112|gb|ACS80808.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 262

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 86/249 (34%), Gaps = 11/249 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V ++ +++ F T+       L  ++K G L  G++         + +G   GFDVD
Sbjct: 2   KRVLVLMVAMMLAFATTAMAGDGSLEKVQKAGKLVIGLDDTFAPMGFRQDDGTLVGFDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   +     KI++ P        +L +K+ D +      T  RE    ++F    
Sbjct: 62  AAEEVGKRLG---IKIEWQPTAWSGVIHSLNAKKFDCIWNGMTITPEREK--AVSFSKPY 116

Query: 123 YFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             D     I    K I +   L G  + VQ G+           A         ++   +
Sbjct: 117 IMDGQIAVIAMGNKSIKAHKDLGGKVVGVQKGSPALEAAKSLKPA---PKEIREYDTNVK 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                 + R +    D   +        RP +++ LP  I+      A  QG+      V
Sbjct: 174 ALLDLESGRLNGVVVDN--IAGRYSMAQRPGKYLALPGYITSEAFGIAFRQGEDSLRAAV 231

Query: 242 SWTHYAMVT 250
             T  AM+ 
Sbjct: 232 QKTIDAMIA 240


>gi|199597486|ref|ZP_03210915.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|199591509|gb|EDY99586.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
          Length = 270

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   ++++  + +     S  A     +    I++   +  G++   V     + NG 
Sbjct: 1   MKRRMIMAVMAFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+            +  ++   +   L+++ ID++      T  R+    
Sbjct: 61  LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +   K  I+++  + G ++ VQ G++    L    K          
Sbjct: 116 VAFSNDYLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   +      A R      D             P+ + I+ D       A  + +
Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235

Query: 233 GDTEWYNIVSWTHYAM 248
            D      ++    A+
Sbjct: 236 SDHVLREKINAGLKAL 251


>gi|118475479|ref|YP_892322.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Campylobacter fetus subsp. fetus 82-40]
 gi|118414705|gb|ABK83125.1| glutamine-binding protein [Campylobacter fetus subsp. fetus 82-40]
          Length = 264

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 16/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K     ++    L F + S+N S         L +IK +G    G+   + GF  +  
Sbjct: 1   MNKFVKGLLILGTGLVFAACSSNTSSDSKEANSNLENIKSKGIFTAGVKDDVPGFGLLNK 60

Query: 53  N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G  +GF++D  + LS  I  D +K++ + + AK R   L +  +D +      T  R+
Sbjct: 61  QTGKIEGFEIDIAKLLSKHILGDENKVKLVSVTAKTRGPMLDNSTLDAVIATFTITDERK 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            +    +    Y D  G ++ K  G++++  L G +I V   +T++ ++ +  K   ++ 
Sbjct: 121 KT--YDYTTPYYKDAVGLLVRKDGGVNTLKDLEGGTIGVSMSSTSKKSILEAAKNLGIEL 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +     I AA  A R DA++ D S L             VIL +  +      A  
Sbjct: 179 KFNEYPDYPSIKAALDAKRIDAFSVDKSILLGYI-----DDNSVILDESFAPQEYGIATR 233

Query: 232 QGDTEWYNIVSWTHYAM 248
           + D E+   V     A 
Sbjct: 234 KNDPEFSKYVDEFVIAN 250


>gi|171318958|ref|ZP_02908088.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171095843|gb|EDT40787.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 271

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 90/249 (36%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L    L       +A  L DI+K G L+         F  V        G 
Sbjct: 1   MKFHTLATWLVGAALVTAGTVAHADRLDDIRKAGVLRVATFDSNPPFGYVDGKSNHIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+   +    GTT E+TL + +         + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNNLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 231 FVNDTLKGL 239


>gi|159027519|emb|CAO89483.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 299

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 97/256 (37%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   V  + + +   ++ S+ A  +   I+K G +  G     + F  V + G W G+
Sbjct: 1   MKRTLAVMTMTVALTVTSNHSSLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +          P K++ + +  + RF  L++  IDI   +T +T  RE    +
Sbjct: 61  SLDMLELIRKETERKLGKPIKLKIVEVTPQNRFEKLKTGVIDIECGSTTFTWKRE--NEV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K   +  +  L+G  I V A TT E  +     A       +  
Sbjct: 119 DFSVSYFAGGTQLLTRKGSNLDDIGSLAGRRIGVIANTTNEAVIKTQQPAA----ILVKV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E          D +  D   L  L+     P+   I+P    +    A  + + D+
Sbjct: 175 KSRGEGLQKLETGEIDGFASDGITLEGLRKNAKNPNNLAIVPSYPYAYESYACTLPENDS 234

Query: 236 EWYNIVSWTHYAMVTA 251
           +W + V++T    +  
Sbjct: 235 KWRDTVNYTLLKFMEG 250


>gi|33591939|ref|NP_879583.1| extracellular solute-binding protein [Bordetella pertussis Tohama
           I]
 gi|33571583|emb|CAE41071.1| probable extracellular solute-binding protein [Bordetella pertussis
           Tohama I]
          Length = 304

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80
             L  I   G +  G     + F+   AN    G+ +D C  +  A+      D  +++Y
Sbjct: 29  GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKY 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           LP+ +  R   + +  ID+   +T  TL  +    +AF   T+  G  FI  K   + ++
Sbjct: 89  LPVTSATRIPLMGNGTIDLECASTSNTL--DCQKQVAFSVTTFVTGNRFISLKSANLKTI 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++   +GT       +  +A ++    +  +   E        R  A+  D   
Sbjct: 147 DDLKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           LY L      P  + +  D +S  P A  + + D ++  +V  T  ++  + +  
Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYASGDFE 261


>gi|183393066|gb|ACC61695.1| extracellular solute-binding protein family 3 protein
           [Lactobacillus rhamnosus HN001]
          Length = 269

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   ++++  + +     S  A     +    I++   +  G++   V     + NG 
Sbjct: 1   MKRRMIMAVMAFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+            +  ++   +   L+++ ID++      T  R+    
Sbjct: 61  LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +   K  I+++  + G ++ VQ G++    L    K          
Sbjct: 116 VAFSNDYLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   +      A R      D             P+ + I+ D       A  + +
Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235

Query: 233 GDTEWYNIVSWTHYAM 248
            D      ++    A+
Sbjct: 236 SDHVLREKINAGLKAL 251


>gi|75906997|ref|YP_321293.1| extracellular solute-binding protein [Anabaena variabilis ATCC
           29413]
 gi|75700722|gb|ABA20398.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Anabaena variabilis ATCC 29413]
          Length = 303

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 99/250 (39%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           MYK+  +++  L +      +      +  + + G L  G +   + FA   A G   G+
Sbjct: 3   MYKNLAIALFSLTLTTVIPDAAFGETVMQKVARTGVLTAGTSRDAMPFAYTNAQGQLTGY 62

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            VD    +   +        +++ + L   +R   + ++Q+DI+   + +T  R+    +
Sbjct: 63  SVDMLSVIKQQLEKELGKKIQLKLVALTPAQRIPKIVNQQVDIVCDASSFTWERDK--KV 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G   ++     + S   L G  I V A TT E  +         +   +  
Sbjct: 121 DFSVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRV----QPQAKLVYL 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E   A +  + DA++ D   L +       P +  I+PD   S+  +A  + + ++
Sbjct: 177 KSRSEGYTALQEGKIDAFSSDSILLESWLQKAKNPDDFAIVPDRPYSREGIACMVPENNS 236

Query: 236 EWYNIVSWTH 245
           ++ + V+++ 
Sbjct: 237 KFLDAVNYSL 246


>gi|27378207|ref|NP_769736.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27351354|dbj|BAC48361.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 302

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 6/254 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC- 64
            + +  +  L   S + ++  L  IK  G +  G     + F+ +  +    GF +D C 
Sbjct: 13  LIGLAAVGTLAGPSIAADSPTLAKIKSSGAITIGHREASIPFSYLGPDQKPIGFSLDLCA 72

Query: 65  ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
                + + +      + Y P+N+  R   +QS  +DI    T     R+    ++F   
Sbjct: 73  GIVERIKAELSLPNLAVNYTPVNSSNRIPLIQSGTVDIECGGTA--NDRKRQEQVSFSVA 130

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           T+     +++    G+ +   L G +I V  G+              + ++ +  +   E
Sbjct: 131 TFVSQPRWLVKADSGLKTAGDLKGKTIVVTQGSNAVGFAQGVNAKEQLGFNIVQAKDHAE 190

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R  A+  D   L  LK    +P   + LP+  +K        +GD  +  +V
Sbjct: 191 SFLMLNTGRAAAFMEDDILLAGLKAAAPKPDALIFLPEGYAKIYYGLMFTKGDAGFKALV 250

Query: 242 SWTHYAMVTAEELG 255
                  + + +  
Sbjct: 251 DDVLSKQMASGQFE 264


>gi|77408339|ref|ZP_00785080.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae COH1]
 gi|77173020|gb|EAO76148.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae COH1]
          Length = 266

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGD 55
           M +   +++  L    I L F   ST+A+ L +IKK G LK G+   +  F    A    
Sbjct: 1   MLRRKRLTLYLLSXIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++G ++D  + ++ ++   P    ++P  A+ R   + + QIDIL      T  R+ +  
Sbjct: 61  YEGMEIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYN 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +      Y D  GF++ K   I ++ +L G  I V  G TT++ L  Y K H +K+    
Sbjct: 118 I--SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQ 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                E+  +  A+R DA++ D S L              IL +  +      A  + D 
Sbjct: 176 LGSFPELAISLYANRIDAFSVDKSILSGYLS-----PHTTILKEGFNTQEYGIATSKQDK 230

Query: 236 EWYNIVSWTHYAM 248
                V+    + 
Sbjct: 231 VLIPYVNKLLVSW 243


>gi|125718374|ref|YP_001035507.1| polar amino acid ABC transporter amino acid-binding protein
           [Streptococcus sanguinis SK36]
 gi|125498291|gb|ABN44957.1| Polar amino acid ABC transporter, amino acid-binding protein,
           putative [Streptococcus sanguinis SK36]
          Length = 270

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 98/259 (37%), Gaps = 14/259 (5%)

Query: 17  FTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
                 ++S    +K   KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AAPAQADSSTSQQVKSIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKIYDKYDLKPSTSTDD 270


>gi|322386066|ref|ZP_08059705.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus cristatus ATCC 51100]
 gi|321269910|gb|EFX52831.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus cristatus ATCC 51100]
          Length = 288

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K           L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLLKSLLTVFALAFALIFVTACGSGGNATSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +       +Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAKDLGVKA---KYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  KK  I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKKGVITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGISSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +APA+ +G+ E  + ++ 
Sbjct: 230 TIAPAVQKGNKELLDFINK 248


>gi|262278743|ref|ZP_06056528.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259094|gb|EEY77827.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 288

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +  IKK G ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++++   
Sbjct: 43  SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A  R   L++ ++DI+  N   T  R+    + F         G +  K   I+ ++QL 
Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDIAQLK 160

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             ++ V  GTT +     +F   + +     +E+  E   A +  R  A   D   + A 
Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 216

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               + P+  V + ++  +  +APA+ +GD E  + ++ 
Sbjct: 217 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253


>gi|300172943|ref|YP_003772109.1| polar amino acid ABC transporter substrate-binding protein
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299887322|emb|CBL91290.1| Polar amino acid ABC transporter, substrate binding protein
           [Leuconostoc gasicomitatum LMG 18811]
          Length = 284

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 87/267 (32%), Gaps = 27/267 (10%)

Query: 1   MYKD---------FFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGIN 41
           M K           F  I+  + +  ++ + + S              IK+   +  G++
Sbjct: 4   MKKKIVVNAIIGLLFFGIVVWLAVGLSAGAKHNSQANQETSKTDEWQRIKQDKQITIGLD 63

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
              V       +G   GFDVD   A+   +      +++ P++   +   L +  ID + 
Sbjct: 64  DTFVPMGFRDKDGKIIGFDVDLANAVFKTMG---ITVKWQPIDWSMKETELNTGNIDAIW 120

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  RE  +   F    +   Q  +  KK  I+S S + G  +  Q  ++ + +  
Sbjct: 121 NGYTKTAAREKQVA--FSNTYHNATQVLVTLKKNNINSFSDMKGKVLGDQTASSGDESFN 178

Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +    K +      + ++  ++      A R D    D             P  + +  
Sbjct: 179 QHPKVLKQYVKDQKVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQANPRNYTVTV 238

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245
              S    A    + D +    V+ T 
Sbjct: 239 GGFSVDETAVGFRKSDNQLRQAVNQTL 265


>gi|70733091|ref|YP_262864.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68347390|gb|AAY94996.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 300

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 93/249 (37%), Gaps = 7/249 (2%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFC----RA 66
              +   + +     L  I     +  G     V F+ V   +G   G+ V+        
Sbjct: 15  FSAMSQANEAPLQGTLAKIANSASITLGYRDASVPFSYVGDNSGKPMGYSVELASKVVER 74

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +     K++Y  + ++ R   +Q+  +D+   +T  T  R+  +   F     +  
Sbjct: 75  IQQQLHLPNLKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVK 132

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              +  K  GI S + L G ++   AGTT E  L  Y   H +    I  +   E     
Sbjct: 133 GQLLTAKDSGIKSFADLRGKNVVTTAGTTNERFLKSYNVEHKIDMFVISAKDHGEAFQML 192

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           ++ R  A+  D + LY  +     P   V++ +  S+   +  + + D ++  +V+    
Sbjct: 193 QSGRAAAFYMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRKDDPQFLALVNGALA 252

Query: 247 AMVTAEELG 255
            +  + E+ 
Sbjct: 253 DLYRSGEIN 261


>gi|323517654|gb|ADX92035.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 280

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +  IKK G ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++++   
Sbjct: 35  SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 94

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A  R   L++ ++DI+  N   T  R+    + F         G +  K   I+ V+QL 
Sbjct: 95  AANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLK 152

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             ++ V  GTT +     +F   + +     +E+  E   A +  R  A   D   + A 
Sbjct: 153 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 208

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               + P+  V + ++  +  +APA+ +GD E  + ++ 
Sbjct: 209 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 245


>gi|184157762|ref|YP_001846101.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii ACICU]
 gi|260550585|ref|ZP_05824794.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp.
           RUH2624]
 gi|294842168|ref|ZP_06786851.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp.
           6014059]
 gi|299770570|ref|YP_003732596.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp.
           DR1]
 gi|183209356|gb|ACC56754.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Acinetobacter baumannii
           ACICU]
 gi|260406296|gb|EEW99779.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp.
           RUH2624]
 gi|298700658|gb|ADI91223.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp.
           DR1]
 gi|322508072|gb|ADX03526.1| Putative amino acid transport protein [Acinetobacter baumannii
           1656-2]
          Length = 288

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +  IKK G ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++++   
Sbjct: 43  SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A  R   L++ ++DI+  N   T  R+    + F         G +  K   I+ V+QL 
Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLK 160

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             ++ V  GTT +     +F   + +     +E+  E   A +  R  A   D   + A 
Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 216

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               + P+  V + ++  +  +APA+ +GD E  + ++ 
Sbjct: 217 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253


>gi|25010745|ref|NP_735140.1| hypothetical protein gbs0690 [Streptococcus agalactiae NEM316]
 gi|77410777|ref|ZP_00787135.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae CJB111]
 gi|23095099|emb|CAD46334.1| unknown [Streptococcus agalactiae NEM316]
 gi|77163156|gb|EAO74109.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae CJB111]
 gi|319744751|gb|EFV97093.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus agalactiae ATCC 13813]
          Length = 266

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGD 55
           M +   +++  L    I L F   ST+A+ L +IKK G LK G+   +  F    A    
Sbjct: 1   MLRRKRLTLYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++G ++D  + ++ ++   P    ++P  A+ R   + + QIDIL      T  R+ +  
Sbjct: 61  YEGMEIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYN 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +      Y D  GF++ K   I ++ +L G  I V  G TT+  L  Y K H +K+    
Sbjct: 118 I--SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKGNLEKYAKEHKLKFSYAQ 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                E+  +  A+R DA++ D S L              IL +  +      A  + D 
Sbjct: 176 LGSFPELAISLYANRIDAFSVDKSILSGYLS-----PHTTILKEGFNTQEYGIATSKQDK 230

Query: 236 EWYNIVSWTHYAM 248
                V+    + 
Sbjct: 231 VLIPYVNKLLVSW 243


>gi|323165232|gb|EFZ51022.1| general L-amino acid-binding periplasmic aapJ domain protein
           [Shigella sonnei 53G]
          Length = 93

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 2/95 (2%)

Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307
           M+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y II+ +GNY 
Sbjct: 1   MLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNIIKQVGNYS 58

Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 59  EIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 93


>gi|120612710|ref|YP_972388.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120591174|gb|ABM34614.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 300

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 7/243 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL----SSAIF 72
            ++F+     L  IK  G +  G+     G +    +G + GF  D C  +       + 
Sbjct: 16  GSAFAQANDTLAKIKASGTITEGVRESS-GLSYTLGDGKYTGFHYDVCARVISDVQKQLG 74

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               + +Y P+ ++ R   +Q+  +DI   +T     R+  +   F   TY +     + 
Sbjct: 75  LSKLETRYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVA--FAVTTYVEEVRIAVK 132

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GIS +  L+G +I    GTT+  TL    +A  + +  +  +   +      + R D
Sbjct: 133 ANSGISGIKDLNGKTIATTTGTTSVQTLRKNKRAEGLTFKEVFGKDHSDSFLLLESGRAD 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D S L +    +  P++  I+ + +S  P+A  I + D  +   V  +   M+ + 
Sbjct: 193 AFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSG 252

Query: 253 ELG 255
           E+ 
Sbjct: 253 EMA 255


>gi|328946749|gb|EGG40887.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1087]
          Length = 270

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 11/259 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
            +   + S+ +  +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I  V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKIKDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +    D+T+ 
Sbjct: 252 SLQKLYDKYDLKPSDSTDD 270


>gi|153953603|ref|YP_001394368.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM
           555]
 gi|219854225|ref|YP_002471347.1| hypothetical protein CKR_0882 [Clostridium kluyveri NBRC 12016]
 gi|146346484|gb|EDK33020.1| Extracellular amino acid-binding protein [Clostridium kluyveri DSM
           555]
 gi|219567949|dbj|BAH05933.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 269

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 17/257 (6%)

Query: 2   YKDFFVSILCLI--ILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           +K   VS++ +I  +  FT    N+       L  +KK G LK G+           +  
Sbjct: 4   FKKAIVSLVMIIFTVALFTGCGNNSGNETQNSLEKVKKAGVLKIGLEDSFPPMEFRDSKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             +GFDVD   A+   +        ++        LAL+S + D++          +   
Sbjct: 64  VLQGFDVDMANAIGEKLGVKTE---FVGTEFNGIVLALKSGKFDVIISGLSI--DEDRKK 118

Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F      + Q  I   +   I +   L G  + V  GTT+E    +           
Sbjct: 119 EIDFSEPYIENSQIIITKVENDTIKTSKDLEGKIVGVGLGTTSEKVAKELTGLK----EV 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +++  E        R DA   D          +D+  ++ +L + ++  P+     +G
Sbjct: 175 KKYDKTTEELQDLLIGRIDAVIVDEPVGKYYISADDKKGKYTVLNEKLTSEPMGIGFRKG 234

Query: 234 DTEWYNIVSWTHYAMVT 250
           D E    V      +  
Sbjct: 235 DKELEEAVQRAVNELKE 251


>gi|300853855|ref|YP_003778839.1| putative extracellular amino acid-binding protein [Clostridium
           ljungdahlii DSM 13528]
 gi|300433970|gb|ADK13737.1| predicted extracellular amino acid-binding protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 274

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 87/260 (33%), Gaps = 24/260 (9%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVG 46
           M K        ++I+    LF    S+N++          L  +KK G LK G+      
Sbjct: 1   MKKLKKTIIVMLTIVFAAALFAGCGSSNSNSGDEQKGQNALERVKKAGVLKVGLEDSFPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                     KGFD+D   A+   +       Q++        LAL S + D++      
Sbjct: 61  MEFRDNQNVLKGFDIDMANAIGKKLGVKT---QFVGTEFNGIILALNSGKFDVIISGLSI 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFK 165
              R+    + F      + Q  +       I +   L+G  + V  GTT+E  +     
Sbjct: 118 DEKRKK--QIDFSQPYIQNAQIIVTKSGNEAIKTSKDLAGKKVGVGLGTTSEKVVQ---- 171

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                     +++  E        R DA   D         + D+  ++ +L + ++  P
Sbjct: 172 TLQGIKEVKKYDKTTEELQDLLIGRIDAVIVDEPVGKYYISSPDKKGKYTVLNEKLTNEP 231

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           +     +GD E    V    
Sbjct: 232 MGVGFKKGDKELETAVQKAL 251


>gi|83593422|ref|YP_427174.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83576336|gb|ABC22887.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 305

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 7/242 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIF 72
             S       L  IK+ G +  G     + F+ +  N    G+ +D C     A+ + + 
Sbjct: 19  SASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELK 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            D   ++  P+ +  R   + +  +D+   +T   L  +     +F    +     F+  
Sbjct: 79  LDTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNL--DRQQQASFTNSHFLTASRFVSK 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   + S+  L G ++   AGTT    + +   A  +    I  +   E        R  
Sbjct: 137 KTSNLKSIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPAKDHAEGFLMVETDRAV 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           A+  D   L  L   +  PS +VI  D  S   P    + + D  +  +V     A+ T+
Sbjct: 197 AFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDPAFKAVVDRATAALYTS 256

Query: 252 EE 253
            E
Sbjct: 257 PE 258


>gi|221212966|ref|ZP_03585942.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
 gi|221167179|gb|EED99649.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
          Length = 312

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 93/249 (37%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M        L  + L     +  A  L DIKK G L+         F  V A      G 
Sbjct: 42  MKIHTLAKALVAVALIAAGTAAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGL 101

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 102 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITEERAK--QVDFS 156

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  I    GTT E+TL + F         + ++  
Sbjct: 157 IPYFSSGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 211

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I P  IS   +   + +G+T    
Sbjct: 212 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 271

Query: 240 IVSWTHYAM 248
            V+ T   +
Sbjct: 272 FVNDTLKGL 280


>gi|15645786|ref|NP_207963.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Helicobacter pylori 26695]
 gi|2314331|gb|AAD08218.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Helicobacter pylori 26695]
          Length = 277

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F + S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|261838498|gb|ACX98264.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori 51]
          Length = 287

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 18  KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 78  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 136 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    +  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 191 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 249 WLNNEMDSLISSDFLK 264


>gi|237731337|ref|ZP_04561818.1| cysteine transporter [Citrobacter sp. 30_2]
 gi|226906876|gb|EEH92794.1| cysteine transporter [Citrobacter sp. 30_2]
          Length = 276

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 11/244 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61
           K   +++  L+    T     A  L DIK  G +K         F  V A      G+DV
Sbjct: 9   KKTLLALGVLLASGLTVSQVQADQLADIKAAGVVKVATFDANPPFGSVDAKTHKIVGYDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF  AL+ ++      ++ +  N   R   LQS + D++  +   T  R  +  + F   
Sbjct: 69  DFAEALAKSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSVP 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  GQ F++  K     + + S A I    GTT E  L   F     +   + ++ +  
Sbjct: 124 YFVTGQQFLVPAKSP-DKLDEYSKARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R     A T D + L  L       ++  ILPD++SK  +   + +G+      V
Sbjct: 179 ALTALRNGNVQAITQDSTILAGLLGAAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAV 238

Query: 242 SWTH 245
           +   
Sbjct: 239 NDEL 242


>gi|217034252|ref|ZP_03439670.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10]
 gi|216943312|gb|EEC22774.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10]
          Length = 277

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    +  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|6119888|gb|AAF04271.1|AF181878_1 amino acid binding protein [Helicobacter pylori]
          Length = 287

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F + S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 18  KMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 78  DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 136 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPDIKLLKFEQN 190

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 191 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 249 WLNNEMDSLISSDFLK 264


>gi|300855677|ref|YP_003780661.1| putative extracellular amino acid-binding protein [Clostridium
           ljungdahlii DSM 13528]
 gi|300435792|gb|ADK15559.1| predicted extracellular amino acid-binding protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 263

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 88/251 (35%), Gaps = 17/251 (6%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    +    ++   FT   TNA      L  +K  G L  G++              
Sbjct: 1   MKKIGMIMLSAIMVFTLFTGCGTNAGEQDNSLNRVKDAGKLTIGLDDSYPPMEFRDNKNK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D   AL+  +      +  +  +     LALQS + D++  +   T  R+    
Sbjct: 61  LSGFDIDLGNALAQKLGVK---LNIVVTDFNGIVLALQSGKFDVILASMSITDERKK--K 115

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F       GQ  I       I + + L G  + VQ G T E   A             
Sbjct: 116 IDFVGPYIDGGQIIITKAGNSSIKTKNDLKGKIVGVQLGATGEQAAAKVSGIK----EIK 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++++ E        R DA   D  A       +   S +VIL D ++K P+   I + D
Sbjct: 172 KYDKITEAFHEVNIGRIDAVVCD--AQVGQYYISKDKSNYVILKDRLTKEPIGIGIKKKD 229

Query: 235 TEWYNIVSWTH 245
            +    ++   
Sbjct: 230 KKLEEALNKAL 240


>gi|293365028|ref|ZP_06611745.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Streptococcus oralis ATCC 35037]
 gi|307702261|ref|ZP_07639221.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|291316478|gb|EFE56914.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Streptococcus oralis ATCC 35037]
 gi|307624274|gb|EFO03251.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 288

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K           L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLLKPILTVFALAFALIFVTACSSGGSSDASSGKKTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  +  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYIDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K K I  V +L G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGISSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +APA+ +G+ E  + ++ 
Sbjct: 230 TIAPAVQKGNQELLDYINQ 248


>gi|332108217|gb|EGJ09441.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 295

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 6/234 (2%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQYL 81
            L  +K  G +        + F+ +       GF  + C  +   +         K+   
Sbjct: 25  TLDKVKASGAIGVAYRESSIPFSYLDDKAQPVGFGFEICGRIVDEVKKVTGRPDLKVNLQ 84

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + +  R   L +  IDI   +T     R   +   F    ++ G  F++    GI S++
Sbjct: 85  SVTSANRIPLLVNGTIDIECGSTTNNSDRAKQVA--FAINYFYTGTRFLVRSDSGIKSLA 142

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  +    GTT    L +    + +    I  +   E     ++ R  A+  D   L
Sbjct: 143 DLNGKVLVSTTGTTNFRILRNLISENKLPIELIGAKDHAEAALLVQSGRAAAFGMDDILL 202

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           Y L+ ++  P+E  ++ + I   P A  + + D  +  +V      ++ + E  
Sbjct: 203 YGLRASSANPAELAVVGESIQVEPYAIMVRKDDPAFKQLVDGVLAGLMKSGEFE 256


>gi|283954480|ref|ZP_06372000.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 414]
 gi|283794097|gb|EFC32846.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 414]
          Length = 259

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   KKSLLKLAVFALGACVAFSNANAAEGKLESIKAKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  ID +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSIDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAVGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGVDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYIDDKS-----EILPDSFDPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|15612164|ref|NP_223816.1| amino acid ABC transporter [Helicobacter pylori J99]
 gi|4155688|gb|AAD06672.1| AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSOR [Helicobacter
           pylori J99]
          Length = 277

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F + S +       L  IK+RG LK G+ +    F  V + G+++G+
Sbjct: 8   KMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 NPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|300811758|ref|ZP_07092231.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497257|gb|EFK32306.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 276

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 16/261 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M   K   +  L L     T+       +        IKKRG L  G++   V     + 
Sbjct: 1   MKWFKKILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQK 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G+DVD  +A+   +        +  ++   +   L++  ID+L      T  R+ 
Sbjct: 61  DGQLVGYDVDLAKAVCKKLGLKAD---FQTIDWSMKETELRNGTIDVLWNGYSVTSQRKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              +AF      + Q  ++ K  GI S +Q+ G +I  Q+G+T ++ L D  +       
Sbjct: 118 --KVAFSRSYLRNRQVLVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWL-DGSQKVIKPKS 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
            ++++ +        A R      D +              + ++ +      L A  + 
Sbjct: 175 KVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMR 234

Query: 232 QGDTEWYNIVSWTHYAMVTAE 252
           +GD      ++    A + A+
Sbjct: 235 KGDKNLKKKINQAL-AELQAD 254


>gi|255973158|ref|ZP_05423744.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|255964176|gb|EET96652.1| amino acid ABC transporter [Enterococcus faecalis T1]
          Length = 275

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 28/272 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S   + +  +KK G +K G+   +
Sbjct: 1   MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTATVEQLKKAGKIKVGVKEDI 60

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R ++  I      ++++ + AK R   L + ++D++   
Sbjct: 61  PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            +   +K+         E+  A  + R DA++ D S L              IL D  S 
Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   + +TE     +     ++   E  
Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261


>gi|258508267|ref|YP_003171018.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus
           GG]
 gi|257148194|emb|CAR87167.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus GG]
 gi|259649585|dbj|BAI41747.1| amino acid ABC transporter substrate binding component
           [Lactobacillus rhamnosus GG]
          Length = 270

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   ++++  + +     S  A     +    I++   +  G++   V     + NG 
Sbjct: 1   MKRRMIMAVMVFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+            +  ++   +   L+++ ID++      T  R+    
Sbjct: 61  LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +   K  I+++  + G ++ VQ G++    L    K          
Sbjct: 116 VAFSNDYLINHQIVVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   +      A R      D             P+ + I+ D       A  + +
Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEQFAVGMRK 235

Query: 233 GDTEWYNIVSWTHYAM 248
            D      ++    A+
Sbjct: 236 SDHVLREKINAGLKAL 251


>gi|317177920|dbj|BAJ55709.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori F16]
          Length = 277

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMAFDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    +  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEMDSLISSDFLK 254


>gi|257461201|ref|ZP_05626299.1| acriflavine resistance protein [Campylobacter gracilis RM3268]
 gi|257441575|gb|EEV16720.1| acriflavine resistance protein [Campylobacter gracilis RM3268]
          Length = 286

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 112/288 (38%), Gaps = 27/288 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46
           M K    ++  L  LFF                 +   S +  IKKRG ++  +      
Sbjct: 1   MKKT-LSTLFILGALFFAGCNDEGKGSSNSAQGSAAPQSYIDGIKKRGVVRIAVFGDKPP 59

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  +   G   G+DV F + ++  +  D SK+Q++ + A  R   L S ++DI   N   
Sbjct: 60  FGYIDETGKNAGYDVYFAKRIAKELLGDESKVQFVLVEAANRAEFLASDKVDITLANFTV 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G    K   I+ VSQL   ++ +  GTT +L     F  
Sbjct: 120 TPERKEV--VDFALPYMKVALGVAS-KDGDITDVSQLKDKTLLINKGTTADLY----FTK 172

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           ++ +   + F++  E   A    R DA   D + L+A   T   P   V +  +  +  +
Sbjct: 173 NHPEIKLLKFDQNTETFGAMLDGRGDAIAHDNTLLFAW--TKSNPGFKVGIRSLGDQDVI 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           APA+ +G+ E    +      +  A+E      + +         D++
Sbjct: 231 APAVKKGNDELRKWLDDLI--VKLADE-KFFHADYDATLAPVYGDDIK 275


>gi|229587795|ref|YP_002869914.1| putative amino acid ABC transporter substrate-binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229359661|emb|CAY46509.1| putative amino acid ABC transport system, substrate-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 284

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 8/226 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S +  IK R  L  G+ T    F  V   G + GFD D  R  +  +  D +K++
Sbjct: 28  TAAAVSYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRRFAKDLLGDENKVE 87

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++ +    R   LQS ++D++  N   T  R+    + F           ++ +   + S
Sbjct: 88  FVAVEPASRIPFLQSDKVDLILANMTVTPERKE--AVDFTNPNLKVAVQALVPQDSSVKS 145

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  L+  +  V  GTT ++ L      H+  +  + FE+  E   A  A R DAY  D  
Sbjct: 146 LDDLATRTTIVTTGTTADIWLT----KHHPDWKLLKFEKNSESLQALSAGRGDAYAQDNL 201

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L++       P   V+   +  ++P+APA+ +G+ E  + V+   
Sbjct: 202 VLFSWAKQ--NPGYRVLEEKLGDEAPIAPAVKKGNVELRDWVNAEL 245


>gi|300362122|ref|ZP_07058299.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus gasseri JV-V03]
 gi|300354741|gb|EFJ70612.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus gasseri JV-V03]
          Length = 277

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 95/253 (37%), Gaps = 16/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M K   + IL L++    + +  A      ++   +K    +  G+      F  +    
Sbjct: 4   MKKSIKIFILPLVLGLLITLTGCAKKQKSSNVYEQVKASKTITWGVKADTRLFGLMSIKT 63

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  +GF+VD  +AL+  +    +K +++    K R   L++  ID +      T  R+  
Sbjct: 64  GKIEGFEVDLAKALTKQMLGKNAKAEFVQTTPKTRIPLLKNGNIDAILATMTITPDRKK- 122

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    +  GQ  ++     I +V  L+G +     GTT    +  +          
Sbjct: 123 -QVTFSEPYFTAGQSLLVKDNSTIKNVKDLNGKTALAVKGTTAVDNVKKFAPKAK----V 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + ++   +   A +A +  A T D   L  +   N     + ++    +  P   A+ +G
Sbjct: 178 LEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASENKG---YKLVGGTYTSEPYGIAVEKG 234

Query: 234 DTEWYNIVSWTHY 246
            T + + ++    
Sbjct: 235 QTGFADRINKALN 247


>gi|300362124|ref|ZP_07058301.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus gasseri JV-V03]
 gi|300354743|gb|EFJ70614.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus gasseri JV-V03]
          Length = 273

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 93/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +   +  L  ++L     S       ++  ++KK   +  G+      F  +    G 
Sbjct: 1   MKRKLRIFSLFTVLLSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF+VD   AL+  +    +K  ++   AK +   L++  ID +      T  R+    
Sbjct: 61  IEGFEVDLANALTKEMLGKNAKASFVQTTAKTKIPLLKNGNIDAVLAAMTITTERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    ++ GQ  ++ +   I +V  L+G       GTT    +  +          + 
Sbjct: 119 IDFSNPYFYAGQSLLVKEDSSIRNVQDLNGKIALAVKGTTAVANVKKFAPKAK----VLE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A +  A T D   L  +   N     + ++    +  P   A+ +G  
Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231

Query: 236 EWYNIVSWTHY 246
           +  N ++    
Sbjct: 232 QMKNAINRALN 242


>gi|187927460|ref|YP_001897947.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|309779838|ref|ZP_07674593.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
 gi|187724350|gb|ACD25515.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
 gi|308921415|gb|EFP67057.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 302

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 90/248 (36%), Gaps = 13/248 (5%)

Query: 16  FFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----S 69
           F ++         L  IK  G +  G+    + F+         G+  D    ++     
Sbjct: 20  FGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKK 79

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +     K+  +P+ ++ R   LQ+  ID+   +T   L R+     +F    +  G   
Sbjct: 80  QLGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK--QASFTNTIFIIGTRI 137

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K  G+   + L G ++   AGTT+E  L        M  + I  +   +      + 
Sbjct: 138 MVKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESG 197

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---- 245
           R  A+  D + LY  +     P+E V++    S+      + + D  +  +   T     
Sbjct: 198 RAVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM 257

Query: 246 -YAMVTAE 252
               + AE
Sbjct: 258 KDGTINAE 265


>gi|317180903|dbj|BAJ58689.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori F32]
          Length = 277

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    +  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEMDSLISSDFLK 254


>gi|325121847|gb|ADY81370.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 288

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 8/218 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +  IKK G ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++++   
Sbjct: 43  SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A  R   L++ ++DI+  N   T  R+    + F         G +  K   I+ V+QL 
Sbjct: 103 AANRVEYLKANKVDIIFANFTVTSERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLK 160

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             ++ V  GTT +     +F   + +     +E+  E   A +  R  A   D   + A 
Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 216

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               + P+  V + ++  +  +APA+ +GD E  + ++
Sbjct: 217 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLN 252


>gi|307704540|ref|ZP_07641447.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK597]
 gi|307621905|gb|EFO00935.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK597]
          Length = 288

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLLKPLLTVLALAFALIFVTACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|315587062|gb|ADU41443.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Helicobacter pylori 35A]
          Length = 287

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 18  KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 78  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 136 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    +  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 191 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 249 WLNNEMDSLISSDFLK 264


>gi|312115423|ref|YP_004013019.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220552|gb|ADP71920.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 302

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 8/258 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M    +V  L L  +   + + +    L  IK  G +  G     + F+ + A     GF
Sbjct: 1   MALSRWVLGLALFAMPGLAQAQDLTGTLKKIKDTGTITIGYRETSIPFSYLGAENKPVGF 60

Query: 60  DVDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D C     A+   + DD  K  Y+ + +  R   + +  +D++  +      R+    
Sbjct: 61  AMDICEKIVDAVKKELKDDSIKTNYVAVTSSTRIPLIANGTVDLVCGSATNNAERQK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +++    Y     ++  K   I+S++ L G ++   AGTT    L +  +A N+    + 
Sbjct: 119 VSYTNSHYLSESKYVTKKASNINSIADLKGKTVVSTAGTTNIKQLNERNQADNLGLTILT 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGD 234
            +   E        R  A+  D   L  L   +  PS +VI  D  SK  P    + +GD
Sbjct: 179 AKDHAEGFLMVETDRAAAFVMDDILLAGLAANSKDPSLYVISTDAFSKAEPYGIMLQKGD 238

Query: 235 TEWYNIVSWTHYAMVTAE 252
             +   V      +   E
Sbjct: 239 EPFKKAVDDATAEIYKTE 256


>gi|187927921|ref|YP_001898408.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|187724811|gb|ACD25976.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
          Length = 302

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 92/234 (39%), Gaps = 6/234 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75
            +++  +L  I+  G ++       V F+   A+    G+ VD C  +   +  D     
Sbjct: 26  LASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADKKPVGYAVDLCLRVVDKLRTDLKRPD 85

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+QY+ +    R  A+   + D+   +T     RE    +AF    Y  G   I+    
Sbjct: 86  LKVQYVLVTPSTRMPAIADGKADLECGSTTNN--RERREKVAFTIPHYIAGIRMIVKTSS 143

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI     L G ++    GTT+   L        +  + +  +   E  A     + DA+ 
Sbjct: 144 GIRRWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVETGKADAFA 203

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            D   LY  +     P ++ ++ D+++  P A  + + DTE+  +V      ++
Sbjct: 204 MDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLVDRAMTNII 257


>gi|221069161|ref|ZP_03545266.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|220714184|gb|EED69552.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
          Length = 303

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 102/258 (39%), Gaps = 8/258 (3%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGD 55
           M  +  ++   L+    T    + +   S L  ++K G +  G+       A  + AN  
Sbjct: 4   MTANLTLACTALVAAMTTFGAQAQTAPGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHR 63

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G+ V+ C  + + I     KI+Y+ + A+     +Q+  +D+    T   L R+  + 
Sbjct: 64  FTGYHVELCEKVLAQIVPSA-KIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQVA 122

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F   TY       +     ++S  QL G ++   AGTT    L  Y   +N+K    +
Sbjct: 123 --FAVTTYVSQVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHENNVKLPTQL 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   E      + R DA+  D + L  +      P  + I+ + +   P+A  + + D 
Sbjct: 181 GKDHFESFLMLESGRADAFVLDDNLLAGVIANAKDPKGYKIVGEALGSEPIALLMRKDDP 240

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +   V      M+ + E
Sbjct: 241 GFKKAVDDALVRMMKSGE 258


>gi|224368338|ref|YP_002602501.1| ABC-type histidine transport system, periplasmic histidine-binding
           protein (HBP) precursor [Desulfobacterium autotrophicum
           HRM2]
 gi|223691054|gb|ACN14337.1| ABC-type histidine transport system, periplasmic histidine-binding
           protein (HBP) precursor [Desulfobacterium autotrophicum
           HRM2]
          Length = 259

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 87/261 (33%), Gaps = 22/261 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  FVSI+ L+ +   S                ++ G       F  +  +G  +GFD
Sbjct: 1   MKKTLFVSIVLLVAMVAGSAFAGNIT--------KVRMGTEGAYPPFNFIDKDGKLQGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A   +    +++  +       L +K+ D +  +   T  R     + F  
Sbjct: 53  VDIAKALCVAAGVE---CEFVMQDWDGMIPGLLAKKFDTIIASMSITQER--LQKVNFTK 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     FI  K      +   L G ++ VQ GT  E  + D F       +   +   
Sbjct: 108 KYYLTPAKFIAKKGSNFEITPEGLKGKTVGVQRGTIHENFVRDKF---GKTMNIKSYATQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E +    + R D    D   L    L      +   +    +        +  AI + D
Sbjct: 165 DEANMDLASGRVDLVIADTVVLSDGFLNKKEGKDFEFVGPGFTDKKWFGEGIGIAIRKED 224

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E  ++++     +    E  
Sbjct: 225 KELLDLMNKAIDTIRANGEYQ 245


>gi|240102149|ref|YP_002958457.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermococcus gammatolerans EJ3]
 gi|239909702|gb|ACS32593.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermococcus gammatolerans EJ3]
          Length = 257

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 17/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M       +L L++    + S   S     K    L  G +     F       G+  GF
Sbjct: 5   MDGKIIGGLLVLMLAAAVASSGCISGGSKEK---VLVVGTSADFPPFEYKDPQTGNITGF 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  + ++     D   ++   ++      ALQ+ ++D++      T  R+    + F 
Sbjct: 62  DIELIKMVAKKAGYDK--VEIKDMDFDSLIPALQTGKVDVVIAGMTITEKRK--QVVDFS 117

Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              +   Q  ++ K   I+  S+  L G  I V+ GTT  + + D       +     + 
Sbjct: 118 IPYWKADQAVVVRKDSSITVSSLDDLKGKVIGVEKGTTGAIYIKDNL---GDQVTLKEYN 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  A    + D    D               +  ++  I +      A+ +G+ E 
Sbjct: 175 SYVAALQALLNGQVDVLVIDSPV----ANMFTNKYDVKVVYTINTNEHYGIAVKKGNKEL 230

Query: 238 YNIVSWTHYAMVTA 251
            + ++     ++ +
Sbjct: 231 LDKINKALQDIMNS 244


>gi|324991490|gb|EGC23423.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK353]
          Length = 270

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 11/259 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
            +   + S+ +  +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKIYDKYDLKPSASTDD 270


>gi|289168272|ref|YP_003446541.1| ABC transporter substrate binding lipoprotein-amino acid transport
           [Streptococcus mitis B6]
 gi|288907839|emb|CBJ22679.1| ABC transporter substrate binding lipoprotein-amino acid transport
           [Streptococcus mitis B6]
          Length = 288

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + DIKK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFVTACSSGGNAASSSGKTTAKARTIDDIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  + +  
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGNPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|327461008|gb|EGF07341.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK1057]
          Length = 270

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 11/259 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
            +   + S+ +  +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKLYDKYDLKPSTSTDD 270


>gi|315926090|ref|ZP_07922290.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315620534|gb|EFV00515.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 273

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 87/250 (34%), Gaps = 10/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  L   ++    F+T   S        G L+ G N     F     N    GF
Sbjct: 1   MKKKLTVIALAACLVAVIGFATGCGSKQKSALDDGVLQIGTNAEYTPFEYKDKNNKLVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  RAL+  +       ++   +    F  L S Q + +      T  R+ S  +   
Sbjct: 61  DVDLGRALAKKMGVKA---KWTNTSFDGIFNGLNSGQYECIIAGVSNTDKRQKSFAM--S 115

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                +G   +        + + QL G  + VQ  TT +   A  FK    K     F+ 
Sbjct: 116 DSYLGNGVVIVSPAGGAQATDIKQLDGKKVGVQLETTAD-YAAKAFKKDGNKMTLKEFDS 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +   A R  + D    D     A      +P+ + +    +S  P+A    + DT   
Sbjct: 175 MIDAFTALRGGQIDYIMTDEP--VANFYVAQQPNTYKVSSSTLSNEPVAVVCRKQDTALR 232

Query: 239 NIVSWTHYAM 248
           + ++    A+
Sbjct: 233 DKINDALKAL 242


>gi|311280748|ref|YP_003942979.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308749943|gb|ADO49695.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 276

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 109/324 (33%), Gaps = 63/324 (19%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61
           K   V++  L      + +  A  L +IK  G +K         F  V     +  G+D+
Sbjct: 9   KRTAVALSVLATAGLAAQTARADQLANIKAAGVIKVATFDANPPFGSVDGKTHELVGYDI 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF  AL+ ++      ++ +  N   R   LQS + D++  +   T  R  +  + F   
Sbjct: 69  DFANALAKSLGVK---LELVATNPANRIPLLQSGKADVIVADITITPER--AQVIDFSTP 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  GQ F++  K G   +     A I    GTT E  L   F     +   + ++ +  
Sbjct: 124 YFVTGQQFLVAAKAGDQ-LEDYQHARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R     A T D + L  L       +   ILPD++SK  +   + +G+    N V
Sbjct: 179 ALTALRNGNVQAITQDSTILAGLLAGAPDKASFKILPDLLSKEEIGVGVKKGEPALLNAV 238

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
           +                             ++ R    +KS    +              
Sbjct: 239 NA----------------------------ELGRL---EKSGEAAK-------------- 253

Query: 302 HMGNYGEMFDRNLGNQSELKIPRG 325
                  ++DR  G  +    PR 
Sbjct: 254 -------IYDRWFGPHTPTPQPRS 270


>gi|229552065|ref|ZP_04440790.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus rhamnosus LMS2-1]
 gi|258539479|ref|YP_003173978.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|229314582|gb|EEN80555.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus rhamnosus LMS2-1]
 gi|257151155|emb|CAR90127.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus Lc 705]
          Length = 270

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   ++++  + +     S  A     +    I++   +  G++   V     + NG 
Sbjct: 1   MKRRMIMAVMVFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+            +  ++   +   L+++ ID++      T  R+    
Sbjct: 61  LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +   K  I+++  + G ++ VQ G++    L    K          
Sbjct: 116 VAFSNDYLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   +      A R      D             P+ + I+ D       A  + +
Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235

Query: 233 GDTEWYNIVSWTHYAM 248
            D      ++    A+
Sbjct: 236 SDHVLREKINAGLKAL 251


>gi|308062450|gb|ADO04338.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori Cuz20]
          Length = 277

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGAIKNIEELENKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            +     ++++++ L 
Sbjct: 239 WLDNEMDSLISSDFLK 254


>gi|297380350|gb|ADI35237.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori v225d]
          Length = 277

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            +     ++++++ L 
Sbjct: 239 WLDNEIDSLISSDFLK 254


>gi|257095474|ref|YP_003169115.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257047998|gb|ACV37186.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 285

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 7/248 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   +  L   ++       + S+L  IK+ G LK G     + F+ V  +   +G+ V
Sbjct: 3   KRTLLLGGLVASLVIAMPVMASESVLARIKQSGTLKLGYRENSMPFSFVGDDKQPRGYSV 62

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D CR ++  +          ++++P+ A+ RF AL+S  ID+   NT  TL R       
Sbjct: 63  DLCRIVAEDLGKQLDLPKLDVRWVPVTAQSRFEALKSGAIDLECGNTTQTLARRA--DFD 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  +T+ DG G +    +  SS+    G  + V AGTTTE TL D   A  +  + I   
Sbjct: 121 FSLMTFIDGAGLLFLDGEVPSSLEATKGQRVAVVAGTTTEKTLEDLIAAGKLGVYLIKVP 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +    A +     AY  D + L    L   +     +     S  P   A+ + D ++
Sbjct: 181 DHDAALRALKDKTATAYAADRTVLITTALVRGQGQAFALATLQFSYEPYGLAMRR-DADF 239

Query: 238 YNIVSWTH 245
              V  T 
Sbjct: 240 RLAVDRTL 247


>gi|313124501|ref|YP_004034760.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312281064|gb|ADQ61783.1| Amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 276

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 16/261 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M   K   +  L L     T+       +        IKKRG L  G++   V     + 
Sbjct: 1   MKWFKRILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQK 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G+DVD  +A+   +        +  ++   +   L++  ID+L      T  R+ 
Sbjct: 61  DGQLVGYDVDLAKAVCKKLGLKAD---FQTIDWSMKETELRNGTIDVLWNGYSVTSQRKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              +AF      + Q  ++ K  GI S +Q+ G +I  Q+G+T ++ L D  +       
Sbjct: 118 --KVAFSRSYLRNRQVLVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWL-DGSQKVIKPKS 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
            ++++ +        A R      D +              + ++ +      L A  + 
Sbjct: 175 KVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMR 234

Query: 232 QGDTEWYNIVSWTHYAMVTAE 252
           +GD      ++    A + A+
Sbjct: 235 KGDKNLKKKINQAL-AELQAD 254


>gi|83716800|ref|YP_439849.1| glutamate/aspartate ABC transporter periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
 gi|83650625|gb|ABC34689.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
          Length = 326

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++  L +      + +A  L  I +   +        V F+ +       GF 
Sbjct: 31  MIHRPLAALAALFVGHAALTAAHAQTLDKIARTNQIVVSYRESAVPFSYLLTPHKAVGFS 90

Query: 61  VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           VD   A+      A+     +  Y+P+  + R   L    +D+   +T  T  R     +
Sbjct: 91  VDVTEAIVDDVRKALRKPDLRTVYMPVTGQNRIPLLVDGTLDLECGSTTNTSAR--GKQV 148

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   +  +   I   + L+  ++    G+T E  L     A ++    ++ 
Sbjct: 149 TFSTNYFYAGTRLMAKRGSHIGDYADLAHKAVATVGGSTNERALRHQLDAQHIDASVVLT 208

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E        R  A   D   LY L+     P    ++ + +   P A  + + D  
Sbjct: 209 KDYAEALKEVADDRAAALALDDVLLYGLRANTSDPDTWEVVGEALQIEPYACMVRKDDPA 268

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   ++ + E  
Sbjct: 269 FKRLVDGTLTRLMKSGEFA 287


>gi|254563286|ref|YP_003070381.1| glutamate and aspartate ABC transporter periplasmic-binding protein
           [Methylobacterium extorquens DM4]
 gi|254270564|emb|CAX26567.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Methylobacterium
           extorquens DM4]
          Length = 303

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79
           +  L  +K  G +  G     V F+ +  N    G+  + C  ++ A    +  D  +++
Sbjct: 27  SGTLKKVKDTGTITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P+ +  R   + +  ID+   +T     R+      F    +     F+  + KG+  
Sbjct: 87  LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++   +GTT    + +   A  +    +  +   E        R DA+  D  
Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204

Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            L AL   +  P  + I  +  S+  P    + + D  +  +V     A+  + E
Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259


>gi|153954995|ref|YP_001395760.1| lysine-arginine-ornithine-binding extracellular protein precursor
           [Clostridium kluyveri DSM 555]
 gi|146347853|gb|EDK34389.1| Predicted lysine-arginine-ornithine-binding extracellular protein
           precursor [Clostridium kluyveri DSM 555]
          Length = 266

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 87/253 (34%), Gaps = 19/253 (7%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K        I   I+      ST        L +IKK G +  G   G        +N
Sbjct: 1   MKKITAIIITVIFGAILFTGCGSSTKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GFDVDF   ++  +        +L ++     LAL SK+ D    +   T  R  +
Sbjct: 61  GQLVGFDVDFSNEVAKRLGVKAE---FLVMDFNGIILALNSKKFDAAIASISITDERRKT 117

Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F       GQ   +   ++ I  V  L G  I  + GTT E  +A+  K       
Sbjct: 118 --TDFSTPYVVGGQVITVKNGREDIKGVDDLKGKVIACELGTTGE-NVANGIKGVK---E 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +++V E        R DA   D            +  E  +L  I+SK P+  A  +
Sbjct: 172 LKKYDKVTEAFQDMSIGRVDATIID--QQVGGYYIQKKKDEFKMLEGILSKEPMGVAYRK 229

Query: 233 GDTEWYNIVSWTH 245
            D    N V    
Sbjct: 230 EDDSLKNEVDKII 242


>gi|323698191|ref|ZP_08110103.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323458123|gb|EGB13988.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 274

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 93/253 (36%), Gaps = 21/253 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           K     +  L +L   + S  A        S L  I + G L+ G+  G + F      G
Sbjct: 2   KRIITLVAVLSLLMCAAMSAQAADIELAKKSTLEQIVQSGTLRVGLEAGYMPFEMTDKKG 61

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFDVD  + ++ A+      ++ +          L S + DI++        R  +L
Sbjct: 62  NVVGFDVDMVKEMAKAMGVK---LELVNTAWDGIIPGLLSGKYDIIASGMTINQER--NL 116

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170
            + F       GQ  ++ KK    I S   L+  G  I  + GTT E      F      
Sbjct: 117 KVNFANPYIIVGQTALIAKKSADKIKSWKDLNQAGVVITSKLGTTGEQAAKRLFPKA--- 173

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                FE  ++        + DA   D+         + + +  V L +  +  PL  AI
Sbjct: 174 -TYKSFEMEDQAMLETMNGKADATVYDLPMTSIFYTQHGKDAGMVFLDEPFTYEPLGWAI 232

Query: 231 IQGDTEWYNIVSW 243
            +GD ++ N ++ 
Sbjct: 233 NKGDPDFLNWLNN 245


>gi|315612794|ref|ZP_07887705.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Streptococcus sanguinis ATCC 49296]
 gi|315314904|gb|EFU62945.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Streptococcus sanguinis ATCC 49296]
          Length = 288

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K           L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKIIKPILTVFALAFTLIFVTACSSSGSSDASSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K K I  V +L G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGISSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +APA+ +G+ E  + ++ 
Sbjct: 230 TIAPAVQKGNQELLDYINQ 248


>gi|323351209|ref|ZP_08086865.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis VMC66]
 gi|322122433|gb|EFX94144.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis VMC66]
          Length = 270

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 11/259 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
            +   + S+ +  +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDS 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKIYDKYDLKPSTSTDD 270


>gi|270292247|ref|ZP_06198461.1| CjaA protein [Streptococcus sp. M143]
 gi|270279293|gb|EFA25136.1| CjaA protein [Streptococcus sp. M143]
          Length = 288

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K           L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKIIKPILTVFALAFALIFVTACSSGGSSDASSGKATAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K K I  V +L G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +APA+ +G+ E  + ++ 
Sbjct: 230 TIAPAVQKGNQELLDFINK 248


>gi|319946728|ref|ZP_08020962.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus australis ATCC 700641]
 gi|319746776|gb|EFV99035.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus australis ATCC 700641]
          Length = 285

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 24/259 (9%)

Query: 1   MY--KDFFVSI-LCLIILFFTSFSTN----------ASILGDIKKRGFLKCGINTGLVGF 47
           M   K   V     L +LF T+  ++          A  + +IKK G L+  +      F
Sbjct: 1   MKFIKPILVLFTFALALLFITACGSSKSSSSSTGSKARTIEEIKKSGELRIAVFGDKKPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             V  +G ++G+D++    L+  +   P   +Y+ ++A  R   L S ++DI   N   T
Sbjct: 61  GYVDNDGSYQGYDIELGNQLAKDLGVKP---KYVSVDAANRAEYLISNKVDITLANFTVT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+    + F         G +  K K I+ V QL G ++ V  GTT E      F+ +
Sbjct: 118 DERKK--QVDFALPYMKVSLGVVSPKDKVITDVKQLEGKTLIVTKGTTAETY----FEKN 171

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           + +     +++  +   A    R DA++ D + + A     +     V +  +     +A
Sbjct: 172 HPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIA 229

Query: 228 PAIIQGDTEWYNIVSWTHY 246
           PA+ +G+ E  + ++    
Sbjct: 230 PAVQKGNKELLDFINDDIQ 248


>gi|317182426|dbj|BAJ60210.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori F57]
          Length = 277

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLITLVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    +  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEMDSLISSDFLK 254


>gi|251790533|ref|YP_003005254.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247539154|gb|ACT07775.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 297

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80
             L  +K  G +  G     V F+         G+          A+   +     +++ 
Sbjct: 27  GTLKKVKDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRKKLDAPNLQVKL 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+   D+   +T   L R     +AF    +  G   +  K  G+   
Sbjct: 87  IPITSQNRIPLLQNGTYDLECGSTTNNLER--QQQVAFSDTIFIIGTRLLTKKDSGLKDF 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           S+L+G ++ V +GTT+E+ L    +   +    I  +   +      + R  A+  D + 
Sbjct: 145 SELTGKAVVVTSGTTSEVLLNKMNEEKKLNLRIISAKDHGDSFRTLESGRAVAFMMDDAL 204

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L   +     P E VI     S+      + + D ++  +V  T   + T+ E  
Sbjct: 205 LAGERAKAKTPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQLQTSGEAE 259


>gi|83750017|ref|ZP_00946953.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|207723706|ref|YP_002254104.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
 gi|207743865|ref|YP_002260257.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
 gi|83723317|gb|EAP70559.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551]
 gi|206588910|emb|CAQ35872.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
 gi|206595265|emb|CAQ62192.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
          Length = 308

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 8/241 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73
            + + +   L  IK+ G +  G     + F+   ++G+  G+  +    +       +  
Sbjct: 28  GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNVTGYSQEISNLIVDGVKKTLGL 87

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++  P+ ++ R   LQ+  ID    +T   L R+  +   F    +  G   ++ K
Sbjct: 88  SSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKK 145

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRC 191
             GI     L G ++   AGTT +  L           K + I+ +   +      + R 
Sbjct: 146 DSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            A+  D   LY  +      ++ V+    +     A  + + D  +  +       ++T+
Sbjct: 206 VAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265

Query: 252 E 252
            
Sbjct: 266 G 266


>gi|227432436|ref|ZP_03914424.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351802|gb|EEJ42040.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 284

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 92/268 (34%), Gaps = 27/268 (10%)

Query: 1   MYKD---------FFVSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGIN 41
           M K           F++++ +  L  ++ S  +               IK+   +  G++
Sbjct: 4   MKKKIVVNSIVGILFIALVVMAALSLSNNSQKSKGTEQTVVKTDQWSRIKREKQITIGLD 63

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
              V       +G   GFDVD   A+  ++     K+++ P++   +   L +  ID + 
Sbjct: 64  DTFVPMGFRDKSGKLVGFDVDLATAVFKSLG---IKVKWQPIDWSMKETELNTGNIDAIW 120

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  RE    +AF    +   Q  +  KK  I+  S +    +  Q  ++ + T A
Sbjct: 121 NGYTITDDREK--KVAFSTPYHKATQVLVTLKKSNINKFSDMQDKVLGDQTASSGDQTFA 178

Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            Y    K +      I ++  ++      A+R D    D             P+++ I  
Sbjct: 179 QYPKVLKQYVKDQKVIGYDTFDKAFNDLNANRIDGLLIDEDYARYYVAHQSNPNDYTITT 238

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                +  A    + D +    V+    
Sbjct: 239 GGFPVNDNAVGFRKADKKLRQAVNKELK 266


>gi|157150751|ref|YP_001450271.1| amino acid transport protein [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262282452|ref|ZP_06060220.1| amino acid transporter [Streptococcus sp. 2_1_36FAA]
 gi|157075545|gb|ABV10228.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|262261743|gb|EEY80441.1| amino acid transporter [Streptococcus sp. 2_1_36FAA]
          Length = 284

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 23/255 (9%)

Query: 1   MY--KDFFVSI-LCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFA 48
           M   K     + L L ++F T+   + +          + +IKK G L+  +      F 
Sbjct: 1   MKLIKSILTVMTLALALVFITACGASKNSNASSSKARTIDEIKKSGELRIAVFGDKKPFG 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N   T 
Sbjct: 61  YVDNDGSYQGYDIELGNQLAKDLGVK---VKYVSVDAANRAEYLISNKVDITLANFTVTD 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F         G +  K   I  V +L G ++ V  GTT E      F+ ++
Sbjct: 118 ERKK--QVDFALPYMKVSLGVVSPKDALIKDVKELKGKTLIVTKGTTAETY----FEKNH 171

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
            +     +++  +   A    R DA++ D + + A     +     V +  +     +AP
Sbjct: 172 PEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAP 229

Query: 229 AIIQGDTEWYNIVSW 243
           A+ +G+ E  + ++ 
Sbjct: 230 AVQKGNKELLDFINK 244


>gi|307708866|ref|ZP_07645326.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK564]
 gi|307620202|gb|EFN99318.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK564]
          Length = 288

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLLKPLLTVLALAFALIFVTACSSGGNGGASSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +  +   ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVN---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  + +  
Sbjct: 172 EKNHPEVKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGNPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|46200782|ref|ZP_00056492.2| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 294

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 98/235 (41%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80
             L  +K+ G +  G+       + +   G   G+ VD CR ++ A    +     +++ 
Sbjct: 17  PTLDKVKRTGSIVLGVRETSYPLSYLDQTGQPIGYHVDICRRIAEAVKTQLGLSSLEVRT 76

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             + +K R   +    ID+   +T     R+  +   F P TY       + K   I+ +
Sbjct: 77  EVVTSKTRIPKMVDGAIDLECGSTTNNAARQTQVA--FAPTTYVASVRIAVKKASRITKL 134

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           +QL G ++   AG+T+   L    +  ++    +      E      + +  A+  D + 
Sbjct: 135 AQLDGKAVVTTAGSTSVQLLKARVQGRDINVIEVFGNDHAESFKMLESDQAAAFVMDDNL 194

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L  L  ++  P ++ IL   ++  P+A  + + D  +  +V  T  AM+T+ E+G
Sbjct: 195 LAGLIASSSAPKDYEILAQTLNTEPIAIMLRKNDPAFKALVDQTVKAMMTSGEVG 249


>gi|298290398|ref|YP_003692337.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296926909|gb|ADH87718.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 274

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 90/245 (36%), Gaps = 9/245 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   ++I   + +     + +A  L D+K +G L  G+      +  +   G+  GF+VD
Sbjct: 2   RTSILTIAASLAMTLGIGAASADTLADVKAKGTLTIGVKNDYPPYGFLNDKGEIVGFEVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +     K + +P+ A  R   L S +IDI+      T  R     + F    
Sbjct: 62  LGKYIAKELLGPEGKFELVPVVAANRIEFLNSGRIDIILATLGVTEERGKV--IDFSEYY 119

Query: 123 YF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               G   I  K    S   +L G ++C   G+     L     + ++      F+   E
Sbjct: 120 VSAPGPSVIAPKAATFSKWEELKGLTLCGIQGSYYNKHL-----SGDLGIQLTAFKTQPE 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A + +RC  +  D   L   K      + + I  D     P A  I + D  + + V
Sbjct: 175 AYRALKDNRCVGFVFDDMTLR-QKTEEADWAGYKIAVDPYEYIPQAAGIRKNDVAFRDAV 233

Query: 242 SWTHY 246
           +    
Sbjct: 234 NKAIT 238


>gi|206563592|ref|YP_002234355.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198039632|emb|CAR55600.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 298

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 77/234 (32%), Gaps = 6/234 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD- 74
                      L  IK  G +  GI    V F+         G+  D    +   +  + 
Sbjct: 18  GTAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRIIDQLKTEL 77

Query: 75  ---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 ++ +P+ ++ R   LQ+  ID    +T  TL R+      F    +  G  F  
Sbjct: 78  NLPNLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQAA--FSNSIFLYGIRFST 135

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  G+   + L+G ++   AGT+ E  L    +   M    I  +   E        R 
Sbjct: 136 RKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRA 195

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A+  D   LY     +  P  + +    +     A  + + D  +  +V    
Sbjct: 196 VAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDDPPFKRVVDGVI 249


>gi|149189496|ref|ZP_01867780.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
 gi|148836653|gb|EDL53606.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
          Length = 264

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V+ +    L  +S S  A  L DI++RG++K G++ G           +  G+D
Sbjct: 1   MKFKALVATILASALAISSTSAFAGKLEDIRERGYIKIGVSLGGEPIGFRDQKNNPAGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + L+  +  +    ++  ++   R   L S Q+D +  N   TL R     + F  
Sbjct: 61  VDLAKRLAEKLGVEA---RFTDVHGDARVSMLFSDQLDAVIGNMSATLERAK--SVNFSI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                G   +  K + I+S+  L+G  + V  G+T E  L                    
Sbjct: 116 PYARAGLRIVHQKDQDINSLQDLAGKRVVVGRGSTGEAFLKREVPEA---ELVYTDNFAP 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +     R  R DA   D S +  L   N      V LP + S  P+A  + +GD E+   
Sbjct: 173 DGVLLLRQGRVDAGIEDSSLIDYLATNNPN---LVTLPGLHSNDPIAIGVRKGDAEYLRW 229

Query: 241 VSWTHYAMVTAEELG 255
           +       + +    
Sbjct: 230 MDMFVSDYINSGAYE 244


>gi|325690800|gb|EGD32801.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK115]
 gi|325696131|gb|EGD38022.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK160]
          Length = 270

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%)

Query: 17  FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
                 ++S    +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AAPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDSLISKWKEDG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       N     +T+ 
Sbjct: 252 SLQKLYDKYNLKPSASTDD 270


>gi|302060676|ref|ZP_07252217.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
          Length = 310

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D       A+   +   
Sbjct: 25  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 85  DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 143 SSYKDFDDLKGKNVVTTAGTTSERILKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 202

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P +  +     S       + +GD  +   V     A   + ++
Sbjct: 203 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 262

Query: 255 G 255
            
Sbjct: 263 N 263


>gi|330808725|ref|YP_004353187.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376833|gb|AEA68183.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 282

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 4/248 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V +               S L  + +RG L  G  +    +    A+G  +GFD+D  R 
Sbjct: 12  VFLFAATTAAMGVAQAADSKLDSVLQRGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARM 71

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +F+DP K++++  ++  R   L + ++D+  +    T  R  +  +AF    Y +G
Sbjct: 72  VAKGLFNDPEKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++        +  L  A   V       +   +       K     ++ V+ +  A 
Sbjct: 130 VGLLLPANSKYKEIEDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+     L    P  +       S    A A+ +GD +W N V+ T +
Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTTLH 247

Query: 247 AMVTAEEL 254
             +T  E 
Sbjct: 248 EAMTGVEF 255


>gi|307706279|ref|ZP_07643092.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307618312|gb|EFN97466.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 288

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|217967439|ref|YP_002352945.1| extracellular solute-binding protein family 3 [Dictyoglomus
           turgidum DSM 6724]
 gi|217336538|gb|ACK42331.1| extracellular solute-binding protein family 3 [Dictyoglomus
           turgidum DSM 6724]
          Length = 257

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L  +++ +      A  +  IKK G LK G +     F  ++ +    GFD
Sbjct: 1   MRKGIIISFLFFLLVLYPVLGAGA--VERIKKVGVLKVGSDVAYAPFEFMEGD-KPVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++ A+      I     +      AL++K+ DI+      T  R+    + F  
Sbjct: 58  IDIAQEIAKALGVKLQVIN---TSFDGIIAALKAKKFDIIISAMTITEERKK--EIDFSI 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  GQ  ++  +   I S   L    + VQ GTT ELT         +K     +E +
Sbjct: 113 PYYDSGQIIVVRSENKDIKSEKDLKDKVVGVQLGTTGELTAKKLKDQIGIK-EIRSYETI 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DA   D+    +L  + + P     +    +      A+ + D +   
Sbjct: 172 PEAFMDLELGRLDAVINDLP--VSLYYSKNNPK-LKCVGKPFTIEQYGIAVRKEDKDLLK 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 KINEIL 234


>gi|264676713|ref|YP_003276619.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni CNB-2]
 gi|262207225|gb|ACY31323.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni CNB-2]
          Length = 303

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 4/248 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCR 65
             +  +      + + + S L  ++K G +  G+       A  + AN  + G+ V+ C 
Sbjct: 14  ALVAAMAASGVQAQTASGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHRFTGYHVELCE 73

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            + + I    +KI+Y+ + A+     +Q+  +D+    T   L R+    ++F   TY  
Sbjct: 74  KVLAQI-APSAKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQK--QVSFAVTTYVS 130

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                +     ++S  QL G ++   AGTT    L  Y   +N+K    + +   E    
Sbjct: 131 QVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQLGKDHFESFLM 190

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + R DA+  D + L  +   +  P  + I+ + +   P+A  + + D  +   V    
Sbjct: 191 LESGRADAFVLDDNLLAGVIANSKDPRGYKIVGEALGSEPIALLMRKDDPGFKKAVDDAL 250

Query: 246 YAMVTAEE 253
             M+ + E
Sbjct: 251 VRMMKSGE 258


>gi|239814179|ref|YP_002943089.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239800756|gb|ACS17823.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 306

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 5/234 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  +++ G +  G     V F+ + A  +  G+ ++ CR L +AI    +    I+++
Sbjct: 38  GTLAKVRESGTIAIGYRESSVPFSFLNARQEPVGYSIELCRELVTAIEEAVNKSLAIKWV 97

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+ +  R  A++   +D+   +T   L R+    ++F P  +  G   ++ K   I S  
Sbjct: 98  PVTSDSRIDAVERGTVDLECGSTTSNLERQKR--VSFSPTIFVSGTKVLVKKGSPIKSFR 155

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  + V AGTT E TL +  +   +     V     +     ++ + DA+  D   L
Sbjct: 156 DLAGKRVAVTAGTTNEKTLRELSQKFRLGIDLRVARDHADSFGLVKSGQADAFATDDVLL 215

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           Y L   +   +++ ++ D +S  P      +GD +   +++ T   +    E+ 
Sbjct: 216 YGLIARDAAKAQYEVVGDYLSYDPYGIMYRKGDAQLAKVINDTFQVLAQDGEIE 269


>gi|300703458|ref|YP_003745060.1| glutamate/aspartate ABC transporter periplasmic binding subunit
           [Ralstonia solanacearum CFBP2957]
 gi|299071121|emb|CBJ42433.1| glutamate/aspartate ABC transporter,periplasmic binding subunit
           [Ralstonia solanacearum CFBP2957]
          Length = 308

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 8/241 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73
            + + +   L  IK+ G +  G     + F+   ++G+  G+  +    +       +  
Sbjct: 28  GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNVTGYSQEISNLIVDGVKKTLGL 87

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++  P+ ++ R   LQ+  ID    +T   L R+  +   F    +  G   ++ K
Sbjct: 88  SSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKK 145

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRC 191
             GI     L G ++   AGTT +  L           K + I+ +   +      + R 
Sbjct: 146 DSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            A+  D   LY  +      ++ V+    +     A  + + D  +  +       ++T+
Sbjct: 206 VAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265

Query: 252 E 252
            
Sbjct: 266 G 266


>gi|326318773|ref|YP_004236445.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375609|gb|ADX47878.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 300

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 7/243 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS---SAIF 72
             +F+ +   L  IK  G +  G+     G +    +G + GF  D C R ++     + 
Sbjct: 16  GGAFAQSNDTLAKIKASGTITEGVRESS-GLSYTLGDGKYTGFHYDVCARVIADVQKQLG 74

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               + +Y P+ ++ R   +Q+  +DI   +T     R+  +   F   TY +     + 
Sbjct: 75  LAKLETKYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVA--FAVTTYVEEVRIAVK 132

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GIS +  L+G +I    GTT+  TL    +A  + +  +  +   +      + R D
Sbjct: 133 ANSGISGIKDLNGKTIATTTGTTSVQTLRKNKRADGLTFKEVFGKDHSDSFLLLESGRAD 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D S L +    +  P++  I+ + +S  P+A  I + D  +   V  +   M+ + 
Sbjct: 193 AFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSG 252

Query: 253 ELG 255
           E+ 
Sbjct: 253 EMA 255


>gi|188527957|ref|YP_001910644.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori Shi470]
 gi|188144197|gb|ACD48614.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori Shi470]
          Length = 277

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLDNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            +     ++++++ L 
Sbjct: 239 WLDNEMDSLISSDFLK 254


>gi|317178527|dbj|BAJ56315.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori F30]
          Length = 277

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPIEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEMDSLISSDFLK 254


>gi|317011370|gb|ADU85117.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Helicobacter pylori SouthAfrica7]
          Length = 277

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 17/263 (6%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M        +   L LI L F + S +       L  IK+RG LK G+ +    F  V +
Sbjct: 1   MKNNKLFKVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G+DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE 
Sbjct: 61  KGQYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREA 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G I  K   I ++ +L    + V  GTT +      F  +     
Sbjct: 121 V--VDFAKPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIK 173

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + FE+  E   A   ++  A + D + L A       P   + +  +  K  +APAI +
Sbjct: 174 LLKFEQNTETFLALLNNKAIALSHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKK 231

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
           G+ +    ++    ++++++ L 
Sbjct: 232 GNPKLLEWLNNEIDSLISSDFLK 254


>gi|282851032|ref|ZP_06260406.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus gasseri 224-1]
 gi|282557984|gb|EFB63572.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus gasseri 224-1]
          Length = 252

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +        +IL  + L         ++  ++K+   +  G+      F  +    G 
Sbjct: 1   MKRKLRIFSLFTILLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF+VD   AL+  +    +K  ++   AK +   L++  ID +      T  R+    
Sbjct: 61  IEGFEVDLANALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    ++ GQ  ++ +   I +V  L+G +     GTT    +  +          + 
Sbjct: 119 IDFSEPYFYAGQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANVKKFAPKAK----VLE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A +  A T D   L  +   N     + ++    +  P   A+ +G  
Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231

Query: 236 EWYNIVSWTHY 246
           +  N ++    
Sbjct: 232 QMKNAINRALN 242


>gi|325694844|gb|EGD36749.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus sanguinis SK150]
          Length = 270

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 11/259 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
            +   + ST +  +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AVPAQADSTTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I Y+P+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKLYDKYDLKPSASTDD 270


>gi|187932687|ref|YP_001885295.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720840|gb|ACD22061.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum B str. Eklund 17B]
          Length = 268

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 88/251 (35%), Gaps = 10/251 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   VS +  I +   +  +N         +  +  G++   V       +G+  GFDV
Sbjct: 7   KKLLIVSCVATIGVNLVACKSNKQ--ESASSKNEIIIGMDDTFVPMGFKDGSGETVGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+   +  +   +++  ++   +   L +  ID++      T  R+    + F  +
Sbjct: 65  DLAKAVGEKLNKE---VKFQSIDWSMKESELNNGNIDLIWNGYSITDERKE--NVEFSKV 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFERV 179
              + Q  I      I+S + L  A +  Q  ++    +       +     + + FE  
Sbjct: 120 YLNNRQVIITLADSKINSKNDLINAKVGAQNQSSAVDAIKADSDMMSKFHGGNVVTFETN 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D   L           ++ IL D       A  I +GDT +  
Sbjct: 180 NDALIDLESGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGTEDYAVGIKKGDTSFVQ 238

Query: 240 IVSWTHYAMVT 250
             +    +++ 
Sbjct: 239 EFNNALNSVIE 249


>gi|325684596|gb|EGD26755.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 281

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 11/247 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63
           F   +L  ++L   S S ++S    +K+   +  G+      F+ +   +G   GF+VD 
Sbjct: 11  FMAVLLLSLVLTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDL 70

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA++  I     K++   ++ K R + L+   +D +      T  R     + F    +
Sbjct: 71  ARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYF 128

Query: 124 FDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             G+  I+ KK  ++S+   + +        G+T +  +  Y          I ++    
Sbjct: 129 MAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPK----SRVIFYDDYGS 184

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A ++ + +A   D + L  L   +       +LPD  +  P    I +G+ ++   V
Sbjct: 185 CYNALKSGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEV 242

Query: 242 SWTHYAM 248
           +     +
Sbjct: 243 NQALKVL 249


>gi|283956264|ref|ZP_06373744.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791984|gb|EFC30773.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 1336]
          Length = 259

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|219855438|ref|YP_002472560.1| hypothetical protein CKR_2095 [Clostridium kluyveri NBRC 12016]
 gi|219569162|dbj|BAH07146.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 276

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 87/253 (34%), Gaps = 19/253 (7%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K        I   I+      ST        L +IKK G +  G   G        +N
Sbjct: 11  MKKITAIIITVIFGAILFTGCGSSTKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSN 70

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GFDVDF   ++  +        +L ++     LAL SK+ D    +   T  R  +
Sbjct: 71  GQLVGFDVDFSNEVAKRLGVKAE---FLVMDFNGIILALNSKKFDAAIASISITDERRKT 127

Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F       GQ   +   ++ I  V  L G  I  + GTT E  +A+  K       
Sbjct: 128 --TDFSTPYVVGGQVITVKNGREDIKGVDDLKGKVIACELGTTGE-NVANGIKGVK---E 181

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +++V E        R DA   D            +  E  +L  I+SK P+  A  +
Sbjct: 182 LKKYDKVTEAFQDMSIGRVDATIID--QQVGGYYIQKKKDEFKMLEGILSKEPMGVAYRK 239

Query: 233 GDTEWYNIVSWTH 245
            D    N V    
Sbjct: 240 EDDSLKNEVDKII 252


>gi|108563536|ref|YP_627852.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori HPAG1]
 gi|107837309|gb|ABF85178.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter pylori HPAG1]
          Length = 277

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F + S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A   T   P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            ++    ++++++ L 
Sbjct: 239 WLNNEIDSLISSDFLK 254


>gi|332041344|gb|EGI77706.1| extracellular solute-binding protein family 3 [Hylemonella gracilis
           ATCC 19624]
          Length = 280

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DW 56
           M K  F +++      IL   + + +A  L DIKK+G L  GI       + V      +
Sbjct: 1   MRKRTFNTLIASAFAAILSLGAVTAHADQLADIKKKGVLVFGILGIDEPNSFVDPKTRQY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+++D   A++  I        +  +    R   LQ   +D+L+ +      RE    +
Sbjct: 61  IGYEIDLANAIAQKIGVKAE---FKQVAVAARIPELQQGHVDLLAASLTHNKEREAL--I 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   ++ KK GI+SV QL G  +    G T E  L             + F
Sbjct: 116 DFGLTHFVTGSKVLVTKKSGITSVQQLGGKKVVTVKGGTQEPNLKRAVPTA----EVVTF 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDT 235
           E  ++   A +  +  AY  D S+LY+  L    +  ++V+LP+ ++  PLA  I +G+T
Sbjct: 172 ESTQQAFLALQQGKGVAYVNDESSLYSDVLKLGPKAKDYVVLPENLNVEPLAIGIKKGET 231

Query: 236 EWYNIVSWTH 245
               +V  T 
Sbjct: 232 ALKAVVDQTL 241


>gi|146311435|ref|YP_001176509.1| extracellular solute-binding protein [Enterobacter sp. 638]
 gi|145318311|gb|ABP60458.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Enterobacter sp. 638]
          Length = 276

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 11/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60
           Y+   +++  L      S    A  L DIK  G +K         F  +     D  G+D
Sbjct: 8   YQQLVLALGLLTAGGILSTPAQADQLADIKAAGVVKVATFDANPPFGSIDPKTHDIVGYD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF +AL+  +      ++ +  N   R   LQS + D++  +   T  R  +  + F  
Sbjct: 68  VDFAKALAKTLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFST 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  GQ F++  K     +   S A I    GTT E  L   F     +   + ++ + 
Sbjct: 123 PYFVTGQQFLVPVKS-ADKLDDYSKARIGAVKGTTGEQALHQRFP----QSRVLSYDDIP 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A R     A T D + L  L       +   ILPD++SK  +   + +G+T   N+
Sbjct: 178 LALTALRNGNVQAITQDSTILAGLLSQAPDKANFKILPDLLSKEEIGVGVKKGETALLNV 237

Query: 241 VSWTH 245
           V+   
Sbjct: 238 VNTEL 242


>gi|73540829|ref|YP_295349.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72118242|gb|AAZ60505.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 297

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 96/259 (37%), Gaps = 7/259 (2%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       ++L    L   +    A  L  I     +        V F+ + A     GF
Sbjct: 1   MKSIPVVAAVLIAAGLPLGASDVYAQTLEKIASSDKITVSYREAAVPFSYLLAPHKAVGF 60

Query: 60  DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            VD   A+       +     K+ Y+P+  + R   L S   D+   +T  T  R   + 
Sbjct: 61  SVDLTEAIIDDVRSRLKKPNLKVDYVPVTGQNRIPMLVSGTYDLECGSTTNTSARGKEVA 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    ++ G   +  K  GI + S L+  ++   AG+T E  L+ Y   HN+    I 
Sbjct: 121 --FSINVFYAGTRLLTKKNSGIKNYSDLTKKTVASTAGSTNEKLLSQYSADHNLDIQLIS 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +        R  A   D   L+ L+  +  PS   I+ D +   P A  + + DT
Sbjct: 179 GKDYADAMQLVLNDRAVALALDDVLLFGLRANSRSPSALEIVGDTLQVEPYACMVRKDDT 238

Query: 236 EWYNIVSWTHYAMVTAEEL 254
           E+  +V  T   ++ + E 
Sbjct: 239 EFKKLVDGTITRLMKSGEF 257


>gi|322376967|ref|ZP_08051460.1| CjaA protein [Streptococcus sp. M334]
 gi|321282774|gb|EFX59781.1| CjaA protein [Streptococcus sp. M334]
          Length = 288

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLLKPLLTVLALAFALIFVTACSSGGNASSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           +  + +     +++  +   A    R DA++ D + + A     +     V +  + +  
Sbjct: 172 EKKHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGNPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|299529534|ref|ZP_07042971.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni S44]
 gi|298722397|gb|EFI63317.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni S44]
          Length = 303

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 4/248 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCR 65
             +  +      + +T+ S L  ++K G +  G+       A  + AN  + G+ V+ C 
Sbjct: 14  ALVAAMAASGVQAQTTSGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHRFTGYHVELCE 73

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            + + I    +KI+Y+ + A+     +Q+  +D+    T   L R+    ++F   TY  
Sbjct: 74  KVLAQI-APSAKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQK--QVSFAVTTYVS 130

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                +     ++S  QL G ++   AGTT    L  Y   +N+K    + +   E    
Sbjct: 131 QVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQLGKDHFESFLM 190

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + R DA+  D + L  +   +  P  + I+ + +   P+A  + + D  +   V    
Sbjct: 191 LESGRADAFVLDDNLLAGVIANSKDPRGYKIVGEALGSEPIALLMRKDDPSFKKAVDDAL 250

Query: 246 YAMVTAEE 253
             M+ + E
Sbjct: 251 VRMMKSGE 258


>gi|308184914|ref|YP_003929047.1| glutamine ABC transporter periplasmic glutamine-binding protein
           [Helicobacter pylori SJM180]
 gi|308060834|gb|ADO02730.1| glutamine ABC transporter periplasmic glutamine-binding protein
           [Helicobacter pylori SJM180]
          Length = 277

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  H      + FE+ 
Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELENKELIVNKGTTADFY----FTKHYPNIKLLKFEQN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A   ++  A   D + L A       P   + +  +  K  +APAI +G+ +   
Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238

Query: 240 IVSWTHYAMVTAEELG 255
            +     ++++++ L 
Sbjct: 239 WLDNEMDSLISSDFLK 254


>gi|268319108|ref|YP_003292764.1| amino acid ABC transporter solute-binding component [Lactobacillus
           johnsonii FI9785]
 gi|262397483|emb|CAX66497.1| amino acid ABC transporter solute-binding component [Lactobacillus
           johnsonii FI9785]
          Length = 273

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 96/250 (38%), Gaps = 14/250 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +   FF   + L  +F  S       ++  ++KK   +  G+      F  +    G 
Sbjct: 1   MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF+VD   AL+  I    +K  ++   AK +   L+++ ID +      T  R+    
Sbjct: 61  IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNENIDAVLAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    ++ GQ  ++     I +V  L+G +     GTT    +  +          + 
Sbjct: 119 IDFSDPYFYAGQSLLVKDDSSIKNVRDLNGKTALAVKGTTAVDNVKKFAPKAK----VLE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++   +   A +A +  A T D   L  +   N     + ++    +  P   A+ +G T
Sbjct: 175 YDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQT 231

Query: 236 EWYNIVSWTH 245
           +  N ++   
Sbjct: 232 QMRNAINRAL 241


>gi|213970850|ref|ZP_03398973.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301384514|ref|ZP_07232932.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302130493|ref|ZP_07256483.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213924373|gb|EEB57945.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 308

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D       A+   +   
Sbjct: 23  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 83  DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  L        M  + I  +   E      + R  A+
Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P +  +     S       + +GD  +   V     A   + ++
Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|172065224|ref|YP_001815936.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171997466|gb|ACB68383.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 313

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 12/245 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75
           + +     L  ++  G +  G     + F+ + A     G+ ++ C+AL S+I    +  
Sbjct: 38  APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++P+ +  R  A+ S  +D+   +T   L R     +AF PI +  G   ++ +  
Sbjct: 98  LTIRWVPVTSDNRIDAVVSGNVDLECGSTTSNLER--QQRVAFSPIIFVAGTKVMVKRGS 155

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L+G  + V AGTT E  L D      +     V     +  A     R DA+ 
Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVANGRADAFA 215

Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   LY L      +  ++ ++ D +S  P      + D +   +V  T       EEL
Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTF------EEL 269

Query: 255 GITQK 259
            +  +
Sbjct: 270 AVDGE 274


>gi|296158165|ref|ZP_06840997.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295891501|gb|EFG71287.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 337

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 88/257 (34%), Gaps = 11/257 (4%)

Query: 7   VSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  L        + S +A      L  I   G +  G+    + F+     G   G+   
Sbjct: 45  LMALAAFGALSLACSAHADELTGTLKKIHDDGVVVLGVREASIPFSYFDGQGT-VGYSQT 103

Query: 63  FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
                   +   +     K+  + + +  R   L + QID+   +T  T+ RE      F
Sbjct: 104 IALQIVDEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAA--F 161

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      I  K  GI+    L+G ++   AGT+ E  L       ++         
Sbjct: 162 SNSFFQYAVRMIARKSSGITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARD 221

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A +  R  A+  D   +Y  K T+ RP + V+    +     A    +GD  + 
Sbjct: 222 HLEAFGAVKDDRAVAFVMDEPIVYGFKSTDSRPDDFVVTGTPLGYEVYACMFRKGDEPFR 281

Query: 239 NIVSWTHYAMVTAEELG 255
           N+V+       T+ E  
Sbjct: 282 NLVNGVIARGQTSGEAE 298


>gi|86150617|ref|ZP_01068839.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596800|ref|ZP_01100037.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562540|ref|YP_002344319.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|123336799|sp|Q0P9X8|PEB1A_CAMJE RecName: Full=Major cell-binding factor; AltName: Full=CBF1;
           AltName: Full=PEB1; Flags: Precursor
 gi|388565|gb|AAA02919.1| major cell-binding factor [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|85838878|gb|EAQ56145.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191641|gb|EAQ95613.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360246|emb|CAL35041.1| aspartate/glutamate-binding ABC transporter protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284926154|gb|ADC28506.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 259

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|37524239|ref|NP_927583.1| hypothetical protein plu0219 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783662|emb|CAE12514.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 278

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 109/328 (33%), Gaps = 66/328 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     ++ L L  L   + +  A  L DIKK G ++  +      F  +        G+
Sbjct: 1   MKSRVVITAL-LAGLTLVTGAAKADKLDDIKKTGAVRIAVFDSNPPFGFIDPQTKKLAGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+++ +      ++  P N   R   L SK++D+++ N   T  R     + F 
Sbjct: 60  DVDIANAIANDLGVK---LELRPTNPANRLPLLASKKVDLIAANFTVTHERAK--QVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + S   +    I    GT  E+TL +++         I ++  
Sbjct: 115 IPYFATGQKFIARKG-ILKSPEDIKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          E  I P  I++   A A  +G    
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPEAQKAEFEISPFSITREYQAVAAAKGQERL 229

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              V+ T                                L ++K                
Sbjct: 230 VEAVNQT-------------------------------LLKLEKEGEAA----------- 247

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
                     E+++R  G +++   PRG
Sbjct: 248 ----------EIYNRWFGPETKSAQPRG 265


>gi|315144632|gb|EFT88648.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX2141]
 gi|315160937|gb|EFU04954.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0645]
          Length = 275

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S     +  +KK G +K G+   +
Sbjct: 1   MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R ++  I      ++++ + AK R   L + ++D++   
Sbjct: 61  PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            +   +K+         E+  A  + R DA++ D S L              IL D  S 
Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   + +TE     +     ++   E  
Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261


>gi|239833796|ref|ZP_04682124.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821859|gb|EEQ93428.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 258

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 90/249 (36%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +   I          A+ L  +K+ G L+ G++     F+ V       GFD
Sbjct: 1   MKTLLSSLVAAGIGALMMLAPAQANDLEKVKQSGELRIGMSGVFPPFSFVDGQNQVVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +   P  +             L++ + D++  +   T  RE    + F  
Sbjct: 61  VDIGTEIAKRLGVKPVVVT---TAFDGIIAGLRAGKFDVVVGSMSITPEREK--AVDFAG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G+G  + +   I S+ +L  G +I V  G T++    +        +    ++ +
Sbjct: 116 PYYRGGRGIFVTEASPIKSMDELKQGKTIAVTLGETSDKWARE-----QGGWTVRTYKGI 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E+    R+ R DA   D   +      +      +  P++     +  A+ +G+ E  +
Sbjct: 171 PELLLELRSGRVDAIASDDIPILIAIKESGEKVRQLDTPELQGTDNVGIALRKGNPELKD 230

Query: 240 IVSWTHYAM 248
            ++     M
Sbjct: 231 AINKALDDM 239


>gi|315124414|ref|YP_004066418.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315018136|gb|ADT66229.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 259

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|116629190|ref|YP_814362.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           gasseri ATCC 33323]
 gi|238853883|ref|ZP_04644246.1| glutamine-binding protein [Lactobacillus gasseri 202-4]
 gi|311111032|ref|ZP_07712429.1| glutamine-binding protein [Lactobacillus gasseri MV-22]
 gi|116094772|gb|ABJ59924.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|238833469|gb|EEQ25743.1| glutamine-binding protein [Lactobacillus gasseri 202-4]
 gi|311066186|gb|EFQ46526.1| glutamine-binding protein [Lactobacillus gasseri MV-22]
          Length = 273

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 93/251 (37%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +        ++L  + L         ++  ++K+   +  G+      F  +    G 
Sbjct: 1   MKRKLRIFSLFTVLLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF+VD   AL+  +    +K  ++   AK +   L++  ID +      T  R+    
Sbjct: 61  IEGFEVDLANALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    ++ GQ  ++ +   I +V  L+G +     GTT    +  +          + 
Sbjct: 119 IDFSEPYFYAGQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANVKKFAPKAK----VLE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   A +A +  A T D   L  +   N     + ++    +  P   A+ +G  
Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231

Query: 236 EWYNIVSWTHY 246
           +  N ++    
Sbjct: 232 QMKNAINRALN 242


>gi|182441006|dbj|BAG24131.1| probable binding protein component of ABC [Pseudomonas cichorii]
          Length = 268

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 102/278 (36%), Gaps = 17/278 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K   ++ +  + L   S   +A  L DIKK G L+         F  V A     +G 
Sbjct: 1   MKK---LTAITALSLAVLSGLAHADRLEDIKKSGVLRVAAFDSNPPFGFVGAKSKQIEGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +A++  +      +Q  P N   R   L + ++D++  N   T  R     + F 
Sbjct: 58  DVDYAKAIADKLGVK---LQLQPTNPANRVPLLVANKVDLVLANFTITPERAE--QVNFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   + +   L+   + V  GT  E  L + F         I ++  
Sbjct: 113 IPYFSSGQQFIVKKG-TLKNQDDLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R     A T D   L  L        ++ + P  IS   +   I +G+T    
Sbjct: 168 PFAFTALRNGNVQAITQDGPKLIGLLANVPDKDKYEVPPFTISNDLIGVGIPKGETALTE 227

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
            V+ T    V  E  G  QK  +      T   + R  
Sbjct: 228 FVNQTL---VELESKGQAQKIYDTWFGPDTPTLLARLF 262


>gi|170704112|ref|ZP_02894730.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170130978|gb|EDS99687.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 313

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 22/290 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75
           + +     L  ++  G +  G     + F+ + A     G+ ++ C+AL S+I    +  
Sbjct: 38  APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++P+ +  R  A+ S  +D+   +T   L R     +AF PI +  G   ++ +  
Sbjct: 98  LTIRWVPVTSDNRIDAVASGNVDLECGSTTSNLER--QQRVAFSPIIFVAGTKVMVKRGS 155

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L+G  + V AGTT E  L D      +     V     +  A   + R DA+ 
Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLDARFKLGIQLQVAPDHAQGFALVASGRADAFA 215

Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   LY L      +  ++ ++ D +S  P      + D +   +V  T       EEL
Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTF------EEL 269

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            +  +          +   +R+      S +   L +++     II  +G
Sbjct: 270 AVDGE---------ISRQYKRWFLRPLPSGVSLNLPMSQQ-LKTIIEAIG 309


>gi|16803778|ref|NP_465263.1| hypothetical protein lmo1738 [Listeria monocytogenes EGD-e]
 gi|224503337|ref|ZP_03671644.1| hypothetical protein LmonFR_12625 [Listeria monocytogenes FSL
           R2-561]
 gi|284802182|ref|YP_003414047.1| hypothetical protein LM5578_1938 [Listeria monocytogenes 08-5578]
 gi|284995324|ref|YP_003417092.1| hypothetical protein LM5923_1889 [Listeria monocytogenes 08-5923]
 gi|16411192|emb|CAC99816.1| lmo1738 [Listeria monocytogenes EGD-e]
 gi|284057744|gb|ADB68685.1| hypothetical protein LM5578_1938 [Listeria monocytogenes 08-5578]
 gi|284060791|gb|ADB71730.1| hypothetical protein LM5923_1889 [Listeria monocytogenes 08-5923]
          Length = 271

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S++ S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQKKINEA 245


>gi|258406149|ref|YP_003198891.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257798376|gb|ACV69313.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 275

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 11/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  +  LF             + K   ++ G+ T  +  A    + +W GFD
Sbjct: 1   MRFGKILFLAVIFALFSAQAVLAGPTYDQVMKDKVIRAGLMTDSIPGAFYNKDNEWVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  +  ++    +  K R   +Q  +ID+   N   T  RE    + F  
Sbjct: 61  VDIAKEIAKRLDCELKRVP---VTNKTRIAFVQQGRIDMSVANM--THKRERDKSIDFSI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFE 177
             +FDGQ  ++ K     +  ++ G  I    GTT+E+ L +  +         + I F+
Sbjct: 116 TYFFDGQKLLVKKGSFA-NWDEIVGQKIATMQGTTSEVNLKNKLEELGDTNADDNVISFQ 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E   A    R   ++ D + L        RP E+ ++ D IS  P    + + D++W
Sbjct: 175 KESECFQALEMGRVAGWSTDSTILLGYAA--KRPGEYELIGDFISDEPYGIGLPEDDSKW 232

Query: 238 YNIVSWTHYAM 248
            + +++T   M
Sbjct: 233 RDTINFTIQDM 243


>gi|121613532|ref|YP_001000595.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157415178|ref|YP_001482434.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Campylobacter jejuni subsp. jejuni 81116]
 gi|167005526|ref|ZP_02271284.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 81-176]
 gi|146325049|sp|A1VZQ4|PEB1A_CAMJJ RecName: Full=Major cell-binding factor; AltName: Full=CBF1;
           AltName: Full=PEB1; Flags: Precursor
 gi|87248925|gb|EAQ71888.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157386142|gb|ABV52457.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747819|gb|ADN91089.1| Major cell-binding factor [Campylobacter jejuni subsp. jejuni M1]
 gi|315932598|gb|EFV11529.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 327]
          Length = 259

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|326315798|ref|YP_004233470.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323372634|gb|ADX44903.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 267

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 77/251 (30%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANG 54
           M K   ++++ L  L        S    AS           +  G++             
Sbjct: 1   MKKIAAIALVSLGALLAACGKNDSAQPAASTPATPPAAVTKIVIGLDDNFPPMGFRDDKN 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D  R  +  +  +   +++ P++   +   L  K++D L      T  R+   
Sbjct: 61  QLVGFDIDMAREAAKRMGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERK--Q 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF      + Q  ++     I + + L+G  +  Q G++    +              
Sbjct: 116 NIAFTAPYMENHQIVVVAANSPIKTKADLAGKIVGAQEGSSAVDAVKKDEAVFKSFKEFK 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F             R +A   D   +        +P ++ +L +          + + D
Sbjct: 176 TFGDNVTALMDLSTGRLEAVVVDE--VVGRYYVAKKPQDYAVLDEHFGTEEYGVGVRKDD 233

Query: 235 TEWYNIVSWTH 245
           T     +    
Sbjct: 234 TALQGRLDKAL 244


>gi|111019187|ref|YP_702159.1| amino acid ABC transporter ATP-binding protein [Rhodococcus jostii
           RHA1]
 gi|110818717|gb|ABG94001.1| probable ABC amino acid transporter, binding component [Rhodococcus
           jostii RHA1]
          Length = 326

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 10/222 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             +  I+ RG L  G++TG    +      G  +GFDVD  R ++  +F DP +++Y  L
Sbjct: 81  PTVDAIRARGRLVVGLDTGSNLMSFRDPATGAVQGFDVDIAREIARDLFGDPDRLEYRIL 140

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            +  R  ALQ   +DI+++    T   +    +AF    +   Q  ++ K   I S + L
Sbjct: 141 TSANREKALQESMVDIVAKTMTITC--DRKERVAFSSEYFEAQQRVLVVKGSPIRSAADL 198

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  +CV  GTT+   L             +      +     +  + DA + D + L  
Sbjct: 199 DGKRVCVVRGTTSLTRLQQVAPTA----DILTVPMWSDCLVVLQQRQVDAVSTDDTILAG 254

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L   +       I+ D +   P    I + + +    V+ T 
Sbjct: 255 LASQDP---YLEIVGDSMGAEPYGVGITKANEDLVRFVNGTL 293


>gi|295394798|ref|ZP_06805013.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972394|gb|EFG48254.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 295

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 94/282 (33%), Gaps = 35/282 (12%)

Query: 1   MYK-DFFVSILCLIILFFTSFS-------------------------TNASILGDIKKRG 34
           M K    V+ L + IL  T                             ++      K  G
Sbjct: 1   MKKVTTLVAGLAVGILALTGCGKEGAPGEQGSGGEAPEYKVAEGVDLADSPTWKKAKDAG 60

Query: 35  FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +K G+     G   + A     +GFD++  + +S+++     +I+++   +  R   LQ
Sbjct: 61  KIKVGVKYDQPGLGNISAGADKPEGFDIEIAKMVSASLGFKADEIEFVETVSANREPFLQ 120

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
              +D++         R+    + F    Y  GQ  ++     I     L+G  +C   G
Sbjct: 121 QGNVDMIVATYTINDKRKEV--VDFAGPYYVAGQDLLVKADSDIDGPDSLAGKKVCSVDG 178

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T    + + +K        + ++   +     ++   DA T D + L           E
Sbjct: 179 STPAQNIQEKYK----DAELVTYDAYSKCVTDLQSGNVDAVTTDDAILRGYAAQYKD--E 232

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             ++    ++ P    + + D    + V+    A   + +  
Sbjct: 233 FKVVGKPFTEEPYGIGLPKDDKALRDAVNDALEASKDSGDWK 274


>gi|302523732|ref|ZP_07276074.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp.
           AA4]
 gi|302432627|gb|EFL04443.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp.
           AA4]
          Length = 321

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 10/235 (4%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSA 70
           L  L      T+   L  IK+RG L  G++     F       G  +GFD+D    ++  
Sbjct: 64  LASLAPNGLDTSGPSLQKIKQRGKLIAGVDQTTYLFGFRNPKTGKLEGFDIDLVNEIARQ 123

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           IF     +QY  + + +R   L+  Q+D++ R    T  R   +   F  + Y  GQ  +
Sbjct: 124 IFGSDGHVQYRAITSSQRETVLKEHQVDVVVRTYSITCARRKQVQ--FSSVYYVAGQKIL 181

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + K     S++ L+G  +C  A +T+   +A            +      +     +  +
Sbjct: 182 VPKSSNAQSLTDLAGKRVCAAAKSTSLAKIATDPAK----PVAVSVPNWSDCLVMLQQGQ 237

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA + D + L  +   +       +  D +++      I + + +    V+   
Sbjct: 238 VDAVSTDDTILAGMAAQDP---TVKVAGDPMTQENYGVGIPKDEEDLVRFVNAVL 289


>gi|150015935|ref|YP_001308189.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902400|gb|ABR33233.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 277

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 91/257 (35%), Gaps = 14/257 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIK------KRGFLKCGINTGLVGFAEVKANGD 55
            K   V+I+  + +   +   NA+   + K       +  L  G++   V       NG+
Sbjct: 8   KKLTVVAIIATLGVSLVACGGNANKSSESKAAKSALDKDELVIGLDDTFVPMGFKNENGE 67

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD   A+   +      +++  ++   +   L +  ID++      T  R+    
Sbjct: 68  IVGFDVDLANAVGKKLNKK---VKFQSIDWSMKETELNNGNIDLIWNGYSITDERKE--K 122

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHNMKYHP 173
           + F      + Q  +      I S + L+G  +  Q G+T    +  A+  +        
Sbjct: 123 VEFSKPYLSNTQVIVTLADSNIESKNDLAGKKVGAQNGSTAVDAVEAANGIEKTFDGGKL 182

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + FE          A R DA   D   L    +      ++ IL D          I +G
Sbjct: 183 VTFEDNNAALMDLEAKRLDAIVVDE-ILARYYMKARGEEKYKILTDNFGSEKYGVGIKKG 241

Query: 234 DTEWYNIVSWTHYAMVT 250
           DT++    +     +++
Sbjct: 242 DTKFVEAFNKALDEVIS 258


>gi|47095664|ref|ZP_00233271.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224499542|ref|ZP_03667891.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes Finland 1988]
 gi|254900757|ref|ZP_05260681.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes J0161]
 gi|254913757|ref|ZP_05263769.1| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|254938144|ref|ZP_05269841.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|47015949|gb|EAL06875.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258610758|gb|EEW23366.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|293591774|gb|EFG00109.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 271

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S++ S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQTKINEA 245


>gi|315927529|gb|EFV06862.1| Putative peptide ABC-transport system periplasmic peptide-binding
           protein [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 264

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 9   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 68

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 69  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 126

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 127 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 186

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 187 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 241

Query: 239 NIVSW 243
             V  
Sbjct: 242 KYVDD 246


>gi|257784253|ref|YP_003179470.1| extracellular solute-binding protein family 3 [Atopobium parvulum
           DSM 20469]
 gi|257472760|gb|ACV50879.1| extracellular solute-binding protein family 3 [Atopobium parvulum
           DSM 20469]
          Length = 298

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 12/228 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L DIKK G +  G+ +    F  V ANG++ G+D+ F   L+  +      I Y+  + 
Sbjct: 52  TLDDIKKAGTVNIGVFSDKAPFGYVDANGNYAGYDIVFAERLAKDMGVK---INYIATDG 108

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           + R   LQS + DI+  N   T   +    + F         G +      I+ VSQL G
Sbjct: 109 QNRVPFLQSNKADIMLANFTVTD--DRKEKVDFSLPYMKIKLGVVSPASAPITDVSQLDG 166

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + V  GTT E+    +F  +  K   + F+   +   A    R DA++ D + + A  
Sbjct: 167 KKLIVSKGTTAEV----WFAKNAPKVELVKFDSYADAYNALLDGRGDAFSTDNTEVLAW- 221

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                P   V + D+     +A A+ +G++     ++      + AEE
Sbjct: 222 -VKSNPGFIVGIDDLGDSDTIAAAVHKGNSSLLEFINNEITGPL-AEE 267


>gi|327400781|ref|YP_004341620.1| ABC transporter periplasmic subunit family 3 [Archaeoglobus
           veneficus SNP6]
 gi|327316289|gb|AEA46905.1| ABC-type transporter, periplasmic subunit family 3 [Archaeoglobus
           veneficus SNP6]
          Length = 274

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 10/221 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L  G++     F  +     +++GFDVD  + +   +     +++++ +  +    
Sbjct: 48  KPGVLTVGMDATYPPFEYINETTDEFEGFDVDLMKEIGKRLG---LEVEFVNVAWEGIIP 104

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASIC 149
            L + + D +      T  R+    + F    +   Q  ++      I+    L+G  + 
Sbjct: 105 GLVAHKYDCICSAMTITEERKK--QIDFSDPYFEAWQVIVVRADCTDITKPEDLAGKVVG 162

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           VQ GTT    +A+      + +    ++   +     +    DA   D     A K   +
Sbjct: 163 VQIGTTG-QFVAEDLVKSGINFEIKTYDTTPDALLDLKNGNIDAVIIDN--GVAEKAIKN 219

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            P  +  +   +S      A+ + + E    ++     +  
Sbjct: 220 NPDVYKTVGGKLSYEEYGIAVAKDNPELLKAINQALKEVKE 260


>gi|294651269|ref|ZP_06728595.1| glutamate-aspartate ABC superfamily ATP binding cassette
           transporter, binding protein [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292822835|gb|EFF81712.1| glutamate-aspartate ABC superfamily ATP binding cassette
           transporter, binding protein [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 314

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 94/276 (34%), Gaps = 26/276 (9%)

Query: 3   KDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTGL 44
           K    S+LC   L F   +                  + +  L  IK  G +  G     
Sbjct: 4   KRTMTSLLCASALMFGLSACSDNKAPAAGDKATEGDVSTSGTLNKIKSSGTIVLGYRDSS 63

Query: 45  VGFAEVKAN-GDWKGFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           + F+ +  N    +G+  D       A+   +     KI+Y  + ++ R   + +  +D+
Sbjct: 64  IPFSYIAGNPNQPEGYAHDLQLKVVEAVKQKLNMPDLKIRYNLVTSQNRIPLVSNGTVDL 123

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
              +T     R     + F    +  G   +  K  GI   + L G  +   AGTT+E  
Sbjct: 124 ECGSTTNNKER--QQQVDFSVGFFEVGSRLLTAKDSGIKDFADLKGKKLVTTAGTTSERY 181

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           +  + +   +    I  +   E     +  R  A+  D   L   K     P++  I+  
Sbjct: 182 IRQHQQELGIG-EIISAKDHAESFLMLQNGRAVAFMMDDILLAGEKSKAKDPNKWNIVGT 240

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +      + +GDT +  +V     A   + E+ 
Sbjct: 241 APIQEIYGCMLRKGDTGFKQVVDDAIKATYASGEIN 276


>gi|51892198|ref|YP_074889.1| glutamine ABC transporter substrate-binding protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855887|dbj|BAD40045.1| glutamine ABC transporter substrate-binding protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 305

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 75/239 (31%), Gaps = 10/239 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDD 74
                +  AS L  IK  G L+ GI+        V  +G    GFD+D   A++  +   
Sbjct: 58  SAGESAQPASSLERIKAEGVLRVGIDASYPPMEFVDEDGKTPIGFDIDLANAVAEKLGVK 117

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
                +  ++       L     D++  +   T  R+  +   F       G  +     
Sbjct: 118 AD---FTIIDWAGIQAGLLGGHYDVIMSSMTITEERQKEM--DFV-QYLTMGIAYASRPG 171

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDA 193
             + S + L G  + VQ  TT +  + D      ++      F    +        R D 
Sbjct: 172 VEVRSDADLDGKIVVVQEETTAQYYVEDLMADKGIQPKELRSFPYATDAFRELANGRADV 231

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              D           D     V     +   P+  A+ +G+TE    +       + AE
Sbjct: 232 VAIDAPV-AGYYAQLDPDQYRVTGFAEMDPDPIGIALRKGETELREALQKAVEE-LEAE 288


>gi|86150788|ref|ZP_01069004.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841958|gb|EAQ59204.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 259

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|70733740|ref|YP_257380.1| glutamine/glutamate ABC transporter periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           fluorescens Pf-5]
 gi|68348039|gb|AAY95645.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Pseudomonas
           fluorescens Pf-5]
          Length = 294

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 8/219 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IK R  L  G+ T    F  V   G + GFD D  R  +  +  D +K++++ +   
Sbjct: 45  LDKIKARDKLIVGVFTDKPPFGFVDETGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPA 104

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   LQS ++D++  N   T  R+    + F           ++ +   + S+  L+  
Sbjct: 105 SRIPFLQSDKVDLILANMTVTPERKE--AVEFTNPNLKVAVQALVPEGSAVKSLDDLASR 162

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +  V  GTT ++ L      ++  +  + FE+  E   A    R DAY  D   L++   
Sbjct: 163 TTIVTTGTTADIWLTQ----NHPDWKLLKFEKNTESLQALANGRGDAYAQDNLILFSW-- 216

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +   P   V+   +  ++P+APA+ +G+ E  + V+   
Sbjct: 217 SKQNPGYRVLPQTLGEQAPIAPAVKKGNIELRDWVNAEL 255


>gi|28871313|ref|NP_793932.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28854564|gb|AAO57627.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 308

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D       A+   +   
Sbjct: 23  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 83  DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  +        M  + I  +   E      + R  A+
Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERIIKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P +  +     S       + +GD  +   V     A   + ++
Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|331015653|gb|EGH95709.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 308

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D       A+   +   
Sbjct: 23  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T   + R     + F    +  G   +  K 
Sbjct: 83  DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                   L G ++   AGTT+E  +        M  + I  +   E      + R  A+
Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERIIKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D + L        +P +  +     S       + +GD  +   V     A   + ++
Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260

Query: 255 G 255
            
Sbjct: 261 N 261


>gi|293608418|ref|ZP_06690721.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828991|gb|EFF87353.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 288

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 101/226 (44%), Gaps = 8/226 (3%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             + +   S +  IKK G ++ G+ +    F  +   G  +GFDV+  + ++  +  D +
Sbjct: 35  TANTTQTVSSIEQIKKNGVVRIGVFSDKPPFGYLDVQGKNQGFDVEIAKHVAKDLLGDEN 94

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K++++   A  R   L++ ++DI+  N   T  R+    + F         G +  K   
Sbjct: 95  KVEFVLTEAANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHP 152

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I++V+QL   ++ V  GTT +     +F   + +     +E+  E   A +  R  A   
Sbjct: 153 ITNVAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAH 208

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           D   + A     + P+  V + ++  +  +APA+ +GD E  + ++
Sbjct: 209 DNLLVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLN 252


>gi|311106718|ref|YP_003979571.1| extracellular solute-binding protein, family 3 family protein 6
           [Achromobacter xylosoxidans A8]
 gi|310761407|gb|ADP16856.1| bacterial extracellular solute-binding protein, family 3 family
           protein 6 [Achromobacter xylosoxidans A8]
          Length = 273

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 102/326 (31%), Gaps = 62/326 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M +    +    +          A  + DIK RG L CG       F+          G+
Sbjct: 1   MKRHTLFAACLGLATLALGAVAQADQVDDIKARGELICGTLGTSQPFSFQDGTTRQLVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+ ++  +      I Y  L+   R   L   ++DIL+ N       + +  + F 
Sbjct: 61  DVDVCKLVADKLGVK---ISYKLLSVAARVPELNEGRVDILAANLG--YSPDRAQQIGFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   Q  ++ K  G+ +V  L+G  I    G+++E  +             I +   
Sbjct: 116 HAYYVSPQKLLVRKDSGLETVEALNGRRIGATKGSSSEREIKRILDK----SQVIGYGDS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +  + DA       L  L L +   +   ++   +   P    + + +  +  
Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPRFLE 231

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
            V+    A+  AE  G+  K                                        
Sbjct: 232 TVN---QALDEAEASGVAAK---------------------------------------- 248

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRG 325
                    +FD+  G ++  K+ RG
Sbjct: 249 ---------LFDKWFGPETPYKLERG 265


>gi|29375695|ref|NP_814849.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis V583]
 gi|227518374|ref|ZP_03948423.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis TX0104]
 gi|227552903|ref|ZP_03982952.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis HH22]
 gi|229546202|ref|ZP_04434927.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis TX1322]
 gi|229550387|ref|ZP_04439112.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis ATCC 29200]
 gi|255976201|ref|ZP_05426787.1| extracellular solute-binding protein [Enterococcus faecalis T2]
 gi|256762127|ref|ZP_05502707.1| extracellular solute-binding protein [Enterococcus faecalis T3]
 gi|256852769|ref|ZP_05558139.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256958616|ref|ZP_05562787.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
 gi|256962285|ref|ZP_05566456.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
 gi|256965480|ref|ZP_05569651.1| extracellular solute-binding protein [Enterococcus faecalis
           HIP11704]
 gi|257078030|ref|ZP_05572391.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
 gi|257082918|ref|ZP_05577279.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
 gi|257085620|ref|ZP_05579981.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
 gi|257086474|ref|ZP_05580835.1| extracellular solute-binding protein [Enterococcus faecalis D6]
 gi|257415733|ref|ZP_05592727.1| extracellular solute-binding protein [Enterococcus faecalis
           AR01/DG]
 gi|257418948|ref|ZP_05595942.1| extracellular solute-binding protein [Enterococcus faecalis T11]
 gi|257422964|ref|ZP_05599954.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293383314|ref|ZP_06629229.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Enterococcus faecalis R712]
 gi|293387529|ref|ZP_06632078.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Enterococcus faecalis S613]
 gi|294780990|ref|ZP_06746342.1| putative bifunctional adhesin/ABC transporter
           aspartate/glutamate-binding protein [Enterococcus
           faecalis PC1.1]
 gi|300859786|ref|ZP_07105874.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD
           Ef11]
 gi|307268767|ref|ZP_07550135.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX4248]
 gi|307273810|ref|ZP_07555032.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0855]
 gi|307274579|ref|ZP_07555759.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX2134]
 gi|307278845|ref|ZP_07559908.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0860]
 gi|307288576|ref|ZP_07568560.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0109]
 gi|307291102|ref|ZP_07570987.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0411]
 gi|312899594|ref|ZP_07758920.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0470]
 gi|312905821|ref|ZP_07764841.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis DAPTO 512]
 gi|312909124|ref|ZP_07767983.1| putative bifunctional adhesin/ABC transporter
           aspartate/glutamate-binding protein [Enterococcus
           faecalis DAPTO 516]
 gi|312951371|ref|ZP_07770269.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0102]
 gi|29343156|gb|AAO80919.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis V583]
 gi|227074052|gb|EEI12015.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis TX0104]
 gi|227177975|gb|EEI58947.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis HH22]
 gi|229304509|gb|EEN70505.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis ATCC 29200]
 gi|229308726|gb|EEN74713.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis TX1322]
 gi|255969073|gb|EET99695.1| extracellular solute-binding protein [Enterococcus faecalis T2]
 gi|256683378|gb|EEU23073.1| extracellular solute-binding protein [Enterococcus faecalis T3]
 gi|256711228|gb|EEU26266.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256949112|gb|EEU65744.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
 gi|256952781|gb|EEU69413.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
 gi|256955976|gb|EEU72608.1| extracellular solute-binding protein [Enterococcus faecalis
           HIP11704]
 gi|256986060|gb|EEU73362.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
 gi|256990948|gb|EEU78250.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
 gi|256993650|gb|EEU80952.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
 gi|256994504|gb|EEU81806.1| extracellular solute-binding protein [Enterococcus faecalis D6]
 gi|257157561|gb|EEU87521.1| extracellular solute-binding protein [Enterococcus faecalis
           ARO1/DG]
 gi|257160776|gb|EEU90736.1| extracellular solute-binding protein [Enterococcus faecalis T11]
 gi|257164788|gb|EEU94748.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291079337|gb|EFE16701.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Enterococcus faecalis R712]
 gi|291083039|gb|EFE20002.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Enterococcus faecalis S613]
 gi|294451936|gb|EFG20386.1| putative bifunctional adhesin/ABC transporter
           aspartate/glutamate-binding protein [Enterococcus
           faecalis PC1.1]
 gi|300850604|gb|EFK78353.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD
           Ef11]
 gi|306497756|gb|EFM67288.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0411]
 gi|306500483|gb|EFM69816.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0109]
 gi|306504516|gb|EFM73723.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0860]
 gi|306508731|gb|EFM77821.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX2134]
 gi|306509495|gb|EFM78543.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0855]
 gi|306514895|gb|EFM83442.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX4248]
 gi|310628160|gb|EFQ11443.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis DAPTO 512]
 gi|310630631|gb|EFQ13914.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0102]
 gi|311290548|gb|EFQ69104.1| putative bifunctional adhesin/ABC transporter
           aspartate/glutamate-binding protein [Enterococcus
           faecalis DAPTO 516]
 gi|311293273|gb|EFQ71829.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0470]
 gi|315028076|gb|EFT40008.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX2137]
 gi|315031597|gb|EFT43529.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0017]
 gi|315034961|gb|EFT46893.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0027]
 gi|315148456|gb|EFT92472.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX4244]
 gi|315150401|gb|EFT94417.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0012]
 gi|315153642|gb|EFT97658.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0031]
 gi|315156540|gb|EFU00557.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0043]
 gi|315158366|gb|EFU02383.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0312]
 gi|315165530|gb|EFU09547.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX1302]
 gi|315168387|gb|EFU12404.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX1341]
 gi|315170970|gb|EFU14987.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX1342]
 gi|315174638|gb|EFU18655.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX1346]
 gi|315573711|gb|EFU85902.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0309B]
 gi|315582674|gb|EFU94865.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0309A]
 gi|323480358|gb|ADX79797.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis 62]
 gi|327534750|gb|AEA93584.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus faecalis OG1RF]
 gi|329576390|gb|EGG57903.1| major cell-binding factor [Enterococcus faecalis TX1467]
          Length = 275

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S     +  +KK G +K G+   +
Sbjct: 1   MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R ++  I      ++++ + AK R   L + ++D++   
Sbjct: 61  PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            +   +K+         E+  A  + R DA++ D S L              IL D  S 
Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   + +TE     +     ++   E  
Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261


>gi|257089531|ref|ZP_05583892.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|256998343|gb|EEU84863.1| ABC amino acid transporter [Enterococcus faecalis CH188]
          Length = 275

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S     +  +KK G +K G+   +
Sbjct: 1   MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R ++  I      ++++ + AK R   L + ++D++   
Sbjct: 61  PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVKFVGVTAKTRGPLLDNGELDMVIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            +   +K+         E+  A  + R DA++ D S L              IL D  S 
Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   + +TE     +     ++   E  
Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261


>gi|194292188|ref|YP_002008095.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           high affinity periplasmic solute-binding protein
           [Cupriavidus taiwanensis LMG 19424]
 gi|193226092|emb|CAQ72039.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           high affinity periplasmic solute-binding protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 281

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 91/244 (37%), Gaps = 8/244 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA--- 70
           +L        + +L  I+  G +  G     + F+     G   G+ VD C   + A   
Sbjct: 1   MLAPAQARAQSPVLDKIRDAGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQ 60

Query: 71  -IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +     K++++PL  + R  A+ +  +D+       +L R+  +   F    Y      
Sbjct: 61  KLGLKDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVA--FSVSHYVSTVRM 118

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++    GI S   L G ++   AG+T +  +  +   +      +  +   E      + 
Sbjct: 119 LVRADSGIRSFGDLRGKTVVTSAGSTGDRHVRRFKGQYGYHD--VYAKDHGESFLLLESG 176

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R  A+  D   L  L+     PS++VI+   +S    A  + + D EW  +V  T     
Sbjct: 177 RAQAFVMDDVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTLATTF 236

Query: 250 TAEE 253
              E
Sbjct: 237 AGPE 240


>gi|325685426|gb|EGD27527.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 276

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 16/261 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M   K   +  L L     T+       +        IKKRG L  G++   V     + 
Sbjct: 1   MKWFKRILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQK 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G+DVD  +A+   +        +  ++   +   L++  ID+L      T  R+ 
Sbjct: 61  DGQLVGYDVDLAKAVCKKLGLKAD---FQTIDWSMKETELRNGTIDVLWNGYSVTSQRKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              +AF      + Q  ++ K  GI S +Q+ G +I  Q+G+T ++ L D  +       
Sbjct: 118 --KVAFSRSYLRNRQILVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWL-DGSQKVIKPKS 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
            ++++ +        A R      D +              + ++ +      L A  + 
Sbjct: 175 KVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMR 234

Query: 232 QGDTEWYNIVSWTHYAMVTAE 252
           +GD      ++    A + A+
Sbjct: 235 KGDKNLKKKINQAL-AELQAD 254


>gi|164688274|ref|ZP_02212302.1| hypothetical protein CLOBAR_01919 [Clostridium bartlettii DSM
           16795]
 gi|164602687|gb|EDQ96152.1| hypothetical protein CLOBAR_01919 [Clostridium bartlettii DSM
           16795]
          Length = 284

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 88/259 (33%), Gaps = 18/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K   ++++ ++ L                 N   L  +  +G L  G++         
Sbjct: 8   MKKLSVIALVLMLGLSTFLGGCSSSSSSSSSANDDSLKYVMDKGELIVGLDDAFPPMGFR 67

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             + +  GFD+D  + ++  +     K+++ P+N + +   L SK ID +      T  R
Sbjct: 68  DDDNNIVGFDIDLAKEVAKRM---DIKVKFQPVNWQAKEQELSSKNIDCIWNGFGITPER 124

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           E    L        + Q F++    GI +   L G  I  Q G+T   T+    +  +  
Sbjct: 125 EKV--LTISEPYMANPQIFVVLADSGIKTQDDLKGKVIAAQNGSTAYATIDKDTELKDSF 182

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPA 229
              +  E   +          DA   D   + A       P ++ I+ D       +   
Sbjct: 183 KEFVGVEDNVKALMDLGVGGSDAVAMDT--VVARYYMAKDPGKYSIIKDTTILDEKMGVG 240

Query: 230 IIQGDTEWYNIVSWTHYAM 248
             +GD      V  T   M
Sbjct: 241 FRKGDNALCKKVEDTLKEM 259


>gi|312958337|ref|ZP_07772858.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6]
 gi|311287401|gb|EFQ65961.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6]
          Length = 282

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
               S +  IK R  L  G+ T    F  V   G + GFD D  R  +  +  D +K+++
Sbjct: 27  PAAVSYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEF 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + +    R   LQS ++D++  N   T  R+    + F           ++     + S+
Sbjct: 87  VAVEPASRIPFLQSDKVDLILANMTVTPERKE--AVDFTNPNLKVAVQALVPNNSAVKSL 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+  +  V  GTT ++ L      ++  +  + FE+  E   A  A R DAY  D   
Sbjct: 145 NDLATRTTIVTTGTTADIWLT----KNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLV 200

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L++       P   V+   +  ++P+APA+ +G+ E  + V+   
Sbjct: 201 LFSWAKQ--NPGYRVLEEKLGDEAPIAPAVKKGNIELRDWVNAEL 243


>gi|313618405|gb|EFR90428.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           innocua FSL S4-378]
          Length = 271

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+           ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFEEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYTIITGGFDPTDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E  + ++  
Sbjct: 236 KELQSKINEV 245


>gi|258406608|ref|YP_003199350.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257798835|gb|ACV69772.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 273

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 95/256 (37%), Gaps = 21/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K +  +++ + +      +  A       S L  I K G L+ G + G + F      
Sbjct: 1   MAKQWLAALVVVFVCLGGLSAQAADIELAQKSTLERILKSGELRVGFDPGYMPFEMTDTK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + GFD+   + ++ ++      +     +      AL +K+ DI+      T  R  +
Sbjct: 61  GRYVGFDIALAKEMAKSMGVKFVPVN---TDFDGIIPALLTKKFDIIISGITVTQER--N 115

Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNM 169
           L + F       GQ  ++ K  ++ + S   L+     V +   TT E+    Y    + 
Sbjct: 116 LQINFSDPYIVVGQTILLRKGLEEEVESYRDLNDGQYTVASRLGTTGEMAAKRYMPKADY 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K     +E+  +        + DA+  D+           +      L +  +  PLA  
Sbjct: 176 K----SYEKEADGALEVLNGQVDAFVYDLPFNAIFNAQQGKGKV-AFLDEPFTYEPLAFG 230

Query: 230 IIQGDTEWYNIVSWTH 245
           I +GD ++ N ++   
Sbjct: 231 IRKGDPDFLNWLNNFL 246


>gi|322833092|ref|YP_004213119.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321168293|gb|ADW73992.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 280

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M      + L L I   ++F+ +A  L DIKK G +K         F  + A   D  G+
Sbjct: 11  MTTSKIAAGLVLAISTLSTFTAHADQLADIKKAGVVKVATFDSNPPFGSLDAKTHDIVGY 70

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDF +AL+  +      +Q +P N   R   LQS + D++  +   T  R     + F 
Sbjct: 71  DVDFAKALAKTLGVK---LQLVPTNPANRIPLLQSGKADLIVADITITPERAKV--IDFS 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F++        +   + A I    GTT E  L + F     +   + ++ +
Sbjct: 126 VPYFVTGQQFLVPAGSP-DKLDAYATARIGAVKGTTGEQELHNRFP----QSRVLSYDDI 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               +A R     A T D + L  L       +++ +LP+++SK  +   + +G+T    
Sbjct: 181 PLALSALRNGNVQAITQDSTILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGETSLLK 240

Query: 240 IVSWTH 245
           +V+   
Sbjct: 241 VVNDEL 246


>gi|315303605|ref|ZP_07874149.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           ivanovii FSL F6-596]
 gi|313628025|gb|EFR96614.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           ivanovii FSL F6-596]
          Length = 271

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 88/252 (34%), Gaps = 11/252 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +I     +  ++ S       IKK   +  G++   V         +  
Sbjct: 1   MKKGLLIAVIAIISFTLVACGSSESKEDQWNRIKKDKEVVIGLDDSFVPMGFRDKEDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +       K+++ P++   +   L++  ID++      T  R+    +A
Sbjct: 61  GFDIDLAKAVFAEYG---IKVKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKK--KVA 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSNPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIITNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDVAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIVTGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWTHY 246
            +    V+    
Sbjct: 236 KKLQTKVNDAFQ 247


>gi|293553345|ref|ZP_06673981.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1039]
 gi|291602569|gb|EFF32785.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1039]
          Length = 271

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 11/265 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K+ F+  L   +L F   S   T+A     I +   +  G++   V       +G   
Sbjct: 1   MKKNSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+          + + P++   +   L +  ID++      T  RE    + 
Sbjct: 61  GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  I  K+ GI++  Q++   +  Q G++         +  K        +
Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++   E     ++ R D    D           +   +  I          A    + D
Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
           +     ++     +    E      
Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260


>gi|57237749|ref|YP_178997.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Campylobacter jejuni RM1221]
 gi|57166553|gb|AAW35332.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni RM1221]
 gi|315058360|gb|ADT72689.1| Major cell-binding factor precursor PebA [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 259

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEIDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|78356430|ref|YP_387879.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218835|gb|ABB38184.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 271

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M   K   + ++ ++ +   +        S+L DI KRG L+ G + G   F     +G+
Sbjct: 1   MKFVKALVLLLVTVMAVPAFAGDIDLAKKSVLNDILKRGELRVGFDAGYPPFEMTDKSGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D  + L+ ++      +     +      +L S + D++      T  R + +G
Sbjct: 61  FVGFDIDLGKELAKSMGVKFVPVN---TDFDGMIPSLLSGKFDVIISGMTLTQERNMKIG 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHP 173
            +   +            K  + S   L+     V +   TT E     Y          
Sbjct: 118 FSEPYLVMGQTVLVAAKHKGTVKSYKDLNDPKFIVVSRMGTTGEEATKKYLPKA----TY 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F++  +        R DA+  D+      +    +   + +L +  +  P+A    QG
Sbjct: 174 KSFDKEVDCAMEVVNGRADAFVYDLPVNEVFQAQQGKDKTY-LLNEPFTFEPMAVGYKQG 232

Query: 234 DTEWYNIVS 242
           D ++ N ++
Sbjct: 233 DPDFANFIN 241


>gi|69248237|ref|ZP_00604687.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium DO]
 gi|257880071|ref|ZP_05659724.1| extracellular solute-binding protein [Enterococcus faecium
           1,230,933]
 gi|257882306|ref|ZP_05661959.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,502]
 gi|257891162|ref|ZP_05670815.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,410]
 gi|257893976|ref|ZP_05673629.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,408]
 gi|258614595|ref|ZP_05712365.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium DO]
 gi|260560316|ref|ZP_05832492.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           C68]
 gi|261208253|ref|ZP_05922926.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           TC 6]
 gi|289565945|ref|ZP_06446384.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium D344SRF]
 gi|293563076|ref|ZP_06677542.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1162]
 gi|294616568|ref|ZP_06696345.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1636]
 gi|294618838|ref|ZP_06698359.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1679]
 gi|294623620|ref|ZP_06702458.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium U0317]
 gi|314940256|ref|ZP_07847429.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a04]
 gi|314941686|ref|ZP_07848565.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133C]
 gi|314947670|ref|ZP_07851079.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0082]
 gi|314950657|ref|ZP_07853737.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133A]
 gi|314992476|ref|ZP_07857897.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133B]
 gi|314996870|ref|ZP_07861875.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a01]
 gi|68194488|gb|EAN08986.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium DO]
 gi|257814299|gb|EEV43057.1| extracellular solute-binding protein [Enterococcus faecium
           1,230,933]
 gi|257817964|gb|EEV45292.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,502]
 gi|257827522|gb|EEV54148.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,410]
 gi|257830355|gb|EEV56962.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,408]
 gi|260073661|gb|EEW61987.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           C68]
 gi|260077510|gb|EEW65228.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           TC 6]
 gi|289162229|gb|EFD10090.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium D344SRF]
 gi|291590578|gb|EFF22310.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1636]
 gi|291594913|gb|EFF26269.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1679]
 gi|291596946|gb|EFF28159.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium U0317]
 gi|291604990|gb|EFF34458.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1162]
 gi|313589013|gb|EFR67858.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a01]
 gi|313592936|gb|EFR71781.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133B]
 gi|313597204|gb|EFR76049.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133A]
 gi|313599458|gb|EFR78301.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133C]
 gi|313640576|gb|EFS05156.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a04]
 gi|313645911|gb|EFS10491.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0082]
          Length = 271

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 86/265 (32%), Gaps = 11/265 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F+  L   +L F   S   T+A     I +   +  G++   V       +G   
Sbjct: 1   MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+          + + P++   +   L +  ID++      T  RE    + 
Sbjct: 61  GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  I  K+ GI++  Q++   +  Q G++         +  K        +
Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++   E     ++ R D    D           +   +  I          A    + D
Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
           +     ++     +    E      
Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260


>gi|282852735|ref|ZP_06262077.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus gasseri 224-1]
 gi|282556477|gb|EFB62097.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus gasseri 224-1]
          Length = 243

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 83/240 (34%), Gaps = 6/240 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
                  AS    IK+RG L  G++   V     + NG   GFDVD   A+   I   P 
Sbjct: 1   MAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKEIGLKPD 60

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
              +  ++   +   L++  ID++      T  R     +AF      + Q  +  KK+ 
Sbjct: 61  ---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSRPYLENDQILVTRKKEQ 115

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAHRCDAYT 195
           I++  Q+ G  + VQ G++    L +Y      +    ++++         +A R D   
Sbjct: 116 INNYCQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSTVLYDTYNNAFIDLKAGRIDGLL 175

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D          +    E             +  I + D    + ++     +    EL 
Sbjct: 176 IDGVYANYYLAHSKYQKEFKKEELPYPSEKFSVGINKKDQILKDKINQALDHLEKTGELE 235


>gi|241765003|ref|ZP_04762999.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241365400|gb|EER60193.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 298

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 96/253 (37%), Gaps = 8/253 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   +  +             L  IK  G +  G+     G A    NG + GF 
Sbjct: 1   MKKHIFAIAVAALAAGSAFAQA-GDTLAKIKSSGSVTLGVRESS-GLAYTLGNGKYVGFH 58

Query: 61  VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +    +       +      ++Y P+ ++ R   + +  +D+   +T     R+  +  
Sbjct: 59  TEMGERILDDIQKQLGLAKLDVKYQPVTSQNRVPLVTNGTVDLECGSTTNNAARQKDVA- 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F   TY +     +    GI S+  L+G ++    GTT+  TL  + +A  + +  ++ 
Sbjct: 118 -FAVTTYVEEVRIAVKASSGIHSIKDLNGKTVATTTGTTSVQTLRKHERAGGIDFKEVLG 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R DA+  D S L         P+++ I+ +++S  P+A  + + D  
Sbjct: 177 KDHADSFLLLETGRADAFVMDGSILAGNISKAKNPADYKIVGEVLSVEPIACMMRKDDPA 236

Query: 237 WYNIVSWTHYAMV 249
           +   V  +    +
Sbjct: 237 FKKAVDDSIKRQI 249


>gi|254832441|ref|ZP_05237096.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes 10403S]
 gi|255017462|ref|ZP_05289588.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes FSL F2-515]
          Length = 271

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S++ S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKGDYNIITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQTKINEA 245


>gi|329118220|ref|ZP_08246930.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465641|gb|EGF11916.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 321

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 8/219 (3%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IK++G ++ G+      F  V + G  +GFDV+  + ++  +   P K++++   A  R 
Sbjct: 81  IKEKGVIRIGVFGDKPPFGYVDSQGKNQGFDVEIAKEMAKDLLGSPDKVEFVLTEAANRV 140

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
              +S ++D++  N   T  R     + F         G +   KK ++ ++QL   ++ 
Sbjct: 141 EYARSGKVDLVLANFTQTPERAE--AVDFAAPYMKVALGVVSPDKKPVTDIAQLKDQTLL 198

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  GTT +     +F  ++ +   + F++  E   A +  R  A   D + L+A     +
Sbjct: 199 VNKGTTADA----FFSKNHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KE 252

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            P   V + +I     +APA+ +GD    + V+    AM
Sbjct: 253 NPGYEVAIGNIGPAEVIAPAVKKGDKALLDWVNAEIAAM 291


>gi|227509837|ref|ZP_03939886.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190761|gb|EEI70828.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 277

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 102/266 (38%), Gaps = 20/266 (7%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVK- 51
           M K       V  L ++++   + S+ +     +L D K+   +  G+      F  +  
Sbjct: 1   MRKILSKVGLVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDV 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +   KGF+VD  +A++  I     K +++ + ++ R   L +  ID +      T  R 
Sbjct: 61  KDNQIKGFEVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRA 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNM 169
               + F    +  GQ  ++     I +V  L+  GA +    G+ +   +  +      
Sbjct: 121 E--QVDFSRSYFDAGQAILVKDGSPIKNVRDLNRKGAVVLGVVGSNSVQNIKKFAPKA-- 176

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +      +   A ++ + DA T D   LY   ++ + P  + ++    +K P   A
Sbjct: 177 --RVLQLSDYSQALTALKSGQGDALTTDNGILYG--MSIENPG-YSVVGGTFTKEPYGIA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
             +G   ++N ++     +  + E  
Sbjct: 232 TAKGQRPFHNAINHALTKVENSGEYN 257


>gi|327470645|gb|EGF16101.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK330]
          Length = 270

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%)

Query: 17  FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
                 ++S    +  I+KRG L  G+   +  F  +  +   + G ++D  + ++  + 
Sbjct: 22  AAPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I YLP+ A+ R   L + Q+D++      T  R+      F    Y D  GF+++
Sbjct: 82  VK---INYLPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ V  L+  +I V  G+ T+  L +  +   + +  +      E+  + RAHR D
Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D S L     +        IL     K+       + +T+  + V           
Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251

Query: 253 ELGITQKNINQVSKDTTNP 271
            L       +     +T+ 
Sbjct: 252 SLQKLYDKYDLKPSASTDD 270


>gi|134293771|ref|YP_001117507.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134136928|gb|ABO58042.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 298

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 83/237 (35%), Gaps = 9/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80
             L  IK  G +  GI    V F+      +  G+  D       AL + +      ++ 
Sbjct: 27  GTLKKIKDTGVVSLGIRESSVPFSYSDNQQNNIGYSRDIAARIIDALKAELKAPNLTVKE 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+  ID    +T  TL R+      F    +  G  F   K  G+   
Sbjct: 87  IPITSQNRIPLLQNGTIDFECGSTTNTLERQKQAA--FSNSIFLYGIRFSTRKDSGVKDF 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G ++   AGT+ E  L    +   M    I  +   E        R  A+  D   
Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT---HYAMVTAEEL 254
           LY     +  P  + +    +     A  + + D  +  +V            AE+L
Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMLRKDDPAFKQLVDRVIAQLQTSGAAEQL 261


>gi|331700617|ref|YP_004397576.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL
           B-30929]
 gi|329127960|gb|AEB72513.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus
           buchneri NRRL B-30929]
          Length = 284

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 26/261 (9%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLV 45
           M K  F      VS+   ++L  T    +            +  IKK G ++  +   L 
Sbjct: 1   MKKRSFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            +  V  +G   G+DV     ++  +      ++++ +NA  R  AL S ++D++  N  
Sbjct: 61  PYGWVNKDGKRVGYDVTLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFT 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T  R     + F         G +  K K I+  SQL G ++ V  GTT E    +YF 
Sbjct: 118 VTPER--KQVIDFAKPYMKVSVGVVSPKNKAITKASQLKGKNVIVTKGTTAE----NYFT 171

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           +       + F+   +   A +  R  A   D S LYA   + D P+  V +  I  KS 
Sbjct: 172 SKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKDNPNYTVGIKSIGPKSY 229

Query: 226 LAPAIIQGDTEWYNIVSWTHY 246
           +APA+ +G+    +  +    
Sbjct: 230 IAPAVKKGNKSLLDWNNKEIN 250


>gi|315925538|ref|ZP_07921748.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621079|gb|EFV01050.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 272

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 13/254 (5%)

Query: 1   MYKDFFVSILCLIILF----FTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGD 55
           M K +  +++   I          S       ++K        G++              
Sbjct: 1   MKKKWLAALMTAAIAVAALAGCGASNKQDSKAEVKNDSKTFVIGVDDTFPPMGFRNKKNQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  R  +  +     K +   +N   + + L++ +ID +      T  R+    
Sbjct: 61  IVGFDIDMAREAAKRM---NLKFKVQAINWDTKEMELKNDKIDAIWNGLSITDERKK--A 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPI 174
           + F      + Q  ++ K  GI + + L+G ++  Q G++ E  L D      +K     
Sbjct: 116 MDFTKPYLENDQVIVVKKDSGIKTKADLAGKTVGCQKGSSAEDALMDDAVGKKIKGGQAT 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+          A R DA   D   + A        S+  +L + +S      A+ +G+
Sbjct: 176 EFDENVSAFEDLNAGRIDAMVVDS--VVARYYIAKHKSDFKVLGESLSPEQYGVAVKKGN 233

Query: 235 TEWYNIVSWTHYAM 248
           T+  + +      M
Sbjct: 234 TQMCDAIQRALDDM 247


>gi|293567503|ref|ZP_06678848.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1071]
 gi|291589746|gb|EFF21549.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E1071]
          Length = 271

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 11/265 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F+  L   +L F   S   T+A     I +   +  G++   V       NG   
Sbjct: 1   MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKNGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+          + + P++   +   L +  ID++      T  RE    + 
Sbjct: 61  GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  I  K+ GI++  Q++   +  Q G++         +  K        +
Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++   E     ++ R D    D           +   +  I          A    + D
Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
           +     ++     +    E      
Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260


>gi|305663952|ref|YP_003860240.1| extracellular solute-binding protein family 3 [Ignisphaera
           aggregans DSM 17230]
 gi|304378521|gb|ADM28360.1| extracellular solute-binding protein family 3 [Ignisphaera
           aggregans DSM 17230]
          Length = 260

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 11/223 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F  +   G+  G D+D  + LS+ I  D   +     +      AL +
Sbjct: 39  KIRVGTSPDFPPFEYIDDKGNIVGIDIDMMKILSNKIGCDMEIVSI---DFNGLIPALIN 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
            QID+++     T  R   +   F    +   Q  ++ K   I   S++ L    + VQ+
Sbjct: 96  NQIDVIASGMTITEERAKVVA--FTKPYWSADQAIVIRKDANINPQSLNDLVNLRVGVQS 153

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT E  ++++  +     + + ++          A R DA   D               
Sbjct: 154 GTTAEQMISEFVSSTGKNINMVSYQSYVLAIQDLLAGRLDAVVVDSPVANMFVKQY---- 209

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              I   I +      A+ + +TE  N ++      + ++E  
Sbjct: 210 NVKISNIITTNESYGLAVRKDNTELLNKLNKALDEFLNSDEWQ 252


>gi|313497437|gb|ADR58803.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1]
          Length = 305

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  IK+ G +  G     + F+ +    +  G+  D   A+  A+        K++Y 
Sbjct: 28  GTLKKIKESGTITLGHRDSSIPFSYLAGKSEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138
            + ++ R   +Q+  +D+   +T   + R+  +G  F    +  G   +   K       
Sbjct: 88  LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G ++   AGTT+E  L        MK + I  +   E      + R  A+  D 
Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + L        +P++ VI     S       + + D  +   V     A   + E+ 
Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKKAVDDAIVAYFKSGEVN 262


>gi|254829260|ref|ZP_05233947.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258601672|gb|EEW14997.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
          Length = 271

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S++ S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            +    ++  
Sbjct: 236 KKLQTKINEA 245


>gi|148989071|ref|ZP_01820471.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP6-BS73]
 gi|149010672|ref|ZP_01832043.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP19-BS75]
 gi|147765153|gb|EDK72082.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP19-BS75]
 gi|147925568|gb|EDK76645.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP6-BS73]
          Length = 286

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|257885500|ref|ZP_05665153.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,501]
 gi|257821356|gb|EEV48486.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,501]
          Length = 271

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 86/265 (32%), Gaps = 11/265 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F+  L   +L F   S   T+A     I +   +  G++   V       +G   
Sbjct: 1   MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+          + + P++   +   L +  ID++      T  RE    + 
Sbjct: 61  GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  I  K+ GI++  Q++   +  Q G++         +  K        +
Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++   E     ++ R D    D           +   +  I          A    + D
Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQGNELEDFNITKGSYESEDFAVGARKSD 235

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
           +     ++     +    E      
Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260


>gi|205356404|ref|ZP_03223169.1| probable ABC type amino-acid transporter periplasmic solute binding
           protein [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345789|gb|EDZ32427.1| probable ABC type amino-acid transporter periplasmic solute binding
           protein [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 259

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +    G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQVTGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|313623355|gb|EFR93580.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           innocua FSL J1-023]
          Length = 271

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+           ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFEEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDPTDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E  + ++  
Sbjct: 236 KELQSKINEA 245


>gi|330836288|ref|YP_004410929.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748191|gb|AEC01547.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 268

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 86/252 (34%), Gaps = 11/252 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   + ++ L  +   +  +      S L  I+ RG    G++           N + 
Sbjct: 1   MKKTLALCVMILAAVSLFAAGSKESGEDSSLKKIQDRGTFILGLDDTFPPMGFRNENNEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  R ++  +      +   P++   +   L + +ID +      T  R+    +
Sbjct: 61  VGFDIDLAREVTKRMG---VTLLLQPIDWNAKEQELNTGKIDCIWNGFTVTEERKKV--V 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F      + Q  ++     +++++ L+G SI +QAG++    +             + F
Sbjct: 116 NFSEPYLENAQVAVVKTSSAVTTLADLAGKSIGLQAGSSASNAVDAAPVFKASLKGIVEF 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +              DA   D   L A         +  IL + ++    A    + D  
Sbjct: 176 KENLTALMDLEIGGVDAVIVD--LLVANDNIKRSGKDFRILDESLAPENYAIGFRKNDNA 233

Query: 237 WYNIVSWTHYAM 248
             N V      M
Sbjct: 234 LRNAVQKHLDDM 245


>gi|16800916|ref|NP_471184.1| hypothetical protein lin1849 [Listeria innocua Clip11262]
 gi|16414351|emb|CAC97080.1| lin1849 [Listeria innocua Clip11262]
          Length = 271

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+           ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFEEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYTIITGGFDPTDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E  + ++  
Sbjct: 236 KELQSKINEA 245


>gi|288905435|ref|YP_003430657.1| amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus UCN34]
 gi|306831516|ref|ZP_07464674.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|288732161|emb|CBI13726.1| Putative amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus UCN34]
 gi|304426301|gb|EFM29415.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 292

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 11/225 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +  A  L +IK+ G +K G+ +    F  V   GD++G+DV F   L+  +  D   +
Sbjct: 39  GNTAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---V 95

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y+ ++   R   L S ++DI+  N   T  R     + F         G +    K IS
Sbjct: 96  EYVAVDPASRVEYLTSAKVDIILANFTVTDERAE--QVDFALPYMKVALGVVSPSSKLIS 153

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           SV  L G ++ V  GTT E      F+ +  K + + +++  E   A    R DA + D 
Sbjct: 154 SVDDLEGKTLIVGKGTTAETY----FEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           + + A     +     V +  +     +APA+ +G+TE  + ++ 
Sbjct: 210 TEVLAWA--LENKGYEVGITSLGDTDTIAPAVQKGNTELLDWIND 252


>gi|225856389|ref|YP_002737900.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Streptococcus
           pneumoniae P1031]
 gi|225726288|gb|ACO22140.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Streptococcus
           pneumoniae P1031]
          Length = 288

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|169832728|ref|YP_001694168.1| amino acid ABC transporter periplasmic protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|168995230|gb|ACA35842.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 288

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|254252393|ref|ZP_04945711.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124895002|gb|EAY68882.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 271

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 95/253 (37%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L    L     + +A  L DI+K G L+         F  V A      G 
Sbjct: 1   MKIHTLATWLIGAALVTAGAAAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNRIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      +Q  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  I    GTT E+TL + F         + ++  
Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I P  IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 230

Query: 240 IVSWTHYAMVTAE 252
            V+ T   +  + 
Sbjct: 231 FVNDTLKGLEASG 243


>gi|315030715|gb|EFT42647.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX4000]
          Length = 275

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S     +  +KK G +K G+   +
Sbjct: 1   MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKIGVKEDI 60

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R ++  I      ++++ + AK R   L + ++D++   
Sbjct: 61  PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            +   +K+         E+  A  + R DA++ D S L              IL D  S 
Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   + +TE     +     ++   E  
Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261


>gi|313123232|ref|YP_004033491.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279795|gb|ADQ60514.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 281

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 100/257 (38%), Gaps = 17/257 (6%)

Query: 1   MYKDF--FVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M +      +++ +++L       S S ++S    +K+   +  G+      F+ +   +
Sbjct: 1   MARKLRELTALMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VD  RA++  I     K++   ++ K R + L+   +D +      T  R   
Sbjct: 61  GKATGFEVDLARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKY 171
             + F    +  G+  I+ KK  ++S+   + +        G+T +  +  Y        
Sbjct: 121 --INFSDTYFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA---- 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I ++       A ++ + +A   D + L  L   +       +LPD  +  P    I 
Sbjct: 175 RVIFYDDYGSCYNALKSGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIK 232

Query: 232 QGDTEWYNIVSWTHYAM 248
           +G+ ++   V+     +
Sbjct: 233 KGEDKFTAEVNQALKVL 249


>gi|310644452|ref|YP_003949211.1| amino-acid abc transporter periplasmic solute-binding protein
           [Paenibacillus polymyxa SC2]
 gi|309249403|gb|ADO58970.1| Amino-acid ABC transporter periplasmic solute-binding protein
           [Paenibacillus polymyxa SC2]
          Length = 292

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 10/232 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +S S   + + DIKK G ++ G+      F  V + G  +GFDV   +  +  +  D 
Sbjct: 32  GSSSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDE 91

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           SK++++ ++A  R   L+S ++DI+  N   T  R+    + F         G +     
Sbjct: 92  SKVEFVLVDAASRVAYLESNKVDIIMANFTVTDERKE--KVDFANPYMKLSFGIVSPDSA 149

Query: 136 GISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            I+++ QL G    + V  GTT E      F  +      + F++  EI +A +  R  A
Sbjct: 150 PITTIDQLKGSDQKLIVAKGTTAETY----FTKNYPDIKLLKFDQYTEIFSALKDKRGAA 205

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D + L A       P   V +P    +  +APA+ +G+ E  + ++   
Sbjct: 206 IANDNTELIAWA--KANPGFTVSIPAFGGQDTIAPAVAKGNKELLDWINNEL 255


>gi|312903652|ref|ZP_07762828.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0635]
 gi|310633005|gb|EFQ16288.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0635]
 gi|315577480|gb|EFU89671.1| putative adhesin/ABC transporter aspartate/glutamate-binding
           protein [Enterococcus faecalis TX0630]
          Length = 287

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S     +  +KK G +K G+   +
Sbjct: 13  MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 72

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R ++  I      ++++ + AK R   L + ++D++   
Sbjct: 73  PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 132

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 133 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 190

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            +   +K+         E+  A  + R DA++ D S L              IL D  S 
Sbjct: 191 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 245

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   + +TE     +     ++   E  
Sbjct: 246 QEYGITTKKANTEL----NDYLNGLIEKWEKD 273


>gi|89896133|ref|YP_519620.1| hypothetical protein DSY3387 [Desulfitobacterium hafniense Y51]
 gi|89335581|dbj|BAE85176.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 263

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 93/249 (37%), Gaps = 10/249 (4%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V++ + +  L      +++S    +++   +  G++            G+  GF
Sbjct: 4   MKKWVAVAMTVLMSGLLLAGCGSSSSAGDAVQQ--KIVIGLDDTFAPMGFRDDGGNLVGF 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++S +     ++++ P++   + + L SK+ID++      T  R     +AF 
Sbjct: 62  DVDMAKEVASRL---DMEVEFKPIDWNSKEVELNSKKIDMIWNGLTITKER--LEKIAFS 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                + Q  ++     I + + L+G  +  Q G+++   L    +          +   
Sbjct: 117 KPYMANRQIVVVLSGSDIKTKADLAGKVVGTQEGSSSVDALNAEPEVTGTFKELRTYADF 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +       R +A  GD   L      N +P     + D   +      + + DTE   
Sbjct: 177 VAVLNELSIGRVEAVVGDEVVL--KYYMNKKPGTFAAIEDNFGEEEYGVGLRKDDTELLG 234

Query: 240 IVSWTHYAM 248
            +     AM
Sbjct: 235 KLQGALDAM 243


>gi|324992111|gb|EGC24033.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK405]
 gi|324994205|gb|EGC26119.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK678]
 gi|327459422|gb|EGF05768.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1]
 gi|327472830|gb|EGF18257.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK408]
          Length = 291

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 30/262 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFLKCGIN 41
           M   K  F      +  F  +  ++                 A  L +IKK G L+  + 
Sbjct: 1   MKLSKTIFALTTLTLAFFLVACGSSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           +    F  V  NG ++G+D+     L+  +   P    Y+P++A  R   L S ++DI  
Sbjct: 61  SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+    + F         G +  K   I+   QL G ++ +  GTT E    
Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             F+ +        +++  +   A    R DA++ D + + A     +     V +  + 
Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229

Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243
               +APA+ +G+TE  N ++ 
Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251


>gi|153011819|ref|YP_001373032.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563707|gb|ABS17203.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 260

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 95/255 (37%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F++ +  ++  F +   +A +L DI  R  ++  + T    F  V ++   +G D
Sbjct: 1   MKTKLFIAAMAALVTSFVAAPASADMLDDIIARKTIRVAVPTDYPPFGSVGSDMQPQGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R ++ ++  +   ++ +P+ A  R   LQ+ + D+   +   T  R     + F  
Sbjct: 61  IDMARLIAKSLGVE---VELIPVTAPNRVAYLQTGKSDLTISSLGKTEERAKV--IDFSI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                       K   I     L+G +I V  G+  +  L +             FE   
Sbjct: 116 AYSPFFDAVFGAKNPPIEKHEDLTGHTIAVTRGSMQDQELEELAP----GAVVKRFEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              AA+ + +   +        A+K  +      + L  +++ SP    + +G+T     
Sbjct: 172 STIAAFISGQVAMFASGTPVAAAIKKRSPDLD--LELKIVLANSPCYVGVAKGETRLLEK 229

Query: 241 VSWTHYAMVTAEELG 255
           V+        + E+ 
Sbjct: 230 VNSIIREAKASGEVD 244


>gi|46907968|ref|YP_014357.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 4b F2365]
 gi|217964115|ref|YP_002349793.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes HCC23]
 gi|226224341|ref|YP_002758448.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes Clip81459]
 gi|254826018|ref|ZP_05231019.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254993941|ref|ZP_05276131.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes FSL J2-064]
 gi|255520512|ref|ZP_05387749.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes FSL J1-175]
 gi|290893395|ref|ZP_06556380.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|46881238|gb|AAT04534.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|217333385|gb|ACK39179.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes HCC23]
 gi|225876803|emb|CAS05512.1| Putative amino acid ABC transporter (binding protein) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|290557046|gb|EFD90575.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|293595257|gb|EFG03018.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|307571318|emb|CAR84497.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes L99]
 gi|313608294|gb|EFR84286.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes FSL F2-208]
          Length = 271

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQTKINEA 245


>gi|107026160|ref|YP_623671.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116692656|ref|YP_838189.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|170738094|ref|YP_001779354.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|105895534|gb|ABF78698.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650656|gb|ABK11296.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169820282|gb|ACA94864.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 298

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 77/225 (34%), Gaps = 6/225 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80
             L  IK  G +  GI    V F+         G+  D    +   +  +       ++ 
Sbjct: 27  GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRVIDQLKTELNLPNLAVKE 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+  ID    +T  TL R+      F    +  G  F   K  G+   
Sbjct: 87  IPITSQNRIPLLQNGTIDFECGSTTNTLERQRQAA--FSNSIFLYGIRFSTRKDSGVKDF 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G ++   AGT+ E  L    +   M    I  +   E        R  A+  D   
Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           LY     +  P  + +    +     A  + + D  +  +V    
Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMMRRDDPAFKRVVDGVI 249


>gi|309779093|ref|ZP_07673860.1| extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA]
 gi|308922158|gb|EFP67788.1| extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA]
          Length = 295

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 106/307 (34%), Gaps = 65/307 (21%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79
              A  L DIKK G L+ G+      F    A  G+  G DVD+ + +++ +      ++
Sbjct: 43  QARADKLDDIKKAGVLRVGVFDANPPFGYADAKTGEPVGLDVDYAQEIANKLGVK---LE 99

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
               N   R   L S ++DI++ N   T  R+    + F    +  G  FI  K   +  
Sbjct: 100 LRATNPANRVPLLTSGKVDIVAANFTITDERKK--QIEFSTPYFASGLQFIAKKG-VLKQ 156

Query: 140 VSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              L   G  + V  GTT E TL + +         I ++       A R     A+  D
Sbjct: 157 PDDLKKDGIRLGVDKGTTQETTLREGYP----NARVIAYDDSPLALTALRTGAIQAFAQD 212

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            + L AL  T    SE  I P ++++  +   + +G+T+    +                
Sbjct: 213 GAKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETKLTATIDQILQ----------- 261

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
                                           GL KD         G  G ++DR  G +
Sbjct: 262 --------------------------------GLEKD---------GTAGRIYDRWFGPK 280

Query: 318 SELKIPR 324
           S   +PR
Sbjct: 281 SAAPLPR 287


>gi|254248250|ref|ZP_04941570.1| Extracellular solute-binding protein, family 3 [Burkholderia
           cenocepacia PC184]
 gi|124874751|gb|EAY64741.1| Extracellular solute-binding protein, family 3 [Burkholderia
           cenocepacia PC184]
          Length = 298

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 77/225 (34%), Gaps = 6/225 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80
             L  IK  G +  GI    V F+         G+  D    +   +  +       ++ 
Sbjct: 27  GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRVIDQLKTELNLPNLAVKE 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ ++ R   LQ+  ID    +T  TL R+      F    +  G  F   K  G+   
Sbjct: 87  IPITSQNRIPLLQNGTIDFECGSTTNTLERQRQAA--FSNSIFLYGIRFSTRKDSGVKDF 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G ++   AGT+ E  L    +   M    I  +   E        R  A+  D   
Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           LY     +  P  + +    +     A  + + D  +  +V    
Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMMRRDDPAFKRVVDGVI 249


>gi|227903457|ref|ZP_04021262.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus acidophilus ATCC 4796]
 gi|227868777|gb|EEJ76198.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus acidophilus ATCC 4796]
          Length = 284

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVS--ILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K +F+S  ++ L+ +  ++   N   SI   +K+   +  G+      F  +   +G 
Sbjct: 13  MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIKDGK 72

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF++D   AL+  I    +K  ++   A  +   L+++ +D +      T  R+    
Sbjct: 73  VRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKK--Q 130

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K   I++V  L+   + +  GTT+   +  +          + 
Sbjct: 131 VEFSKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTSADAVRKFAPKA----EILQ 186

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +  AA +A + DA+  D   L          S + I     +  P   A+ +G  
Sbjct: 187 FDDYGQAFAALKADQGDAFVTDNGILAG---ILRDNSGYKIAGGTFTNQPYGIAVNKGQN 243

Query: 236 EWYNIVSWTHY 246
           E    ++    
Sbjct: 244 EMMEHINLALT 254


>gi|190403010|gb|ACE78173.1| periplasmic amino acid-binding protein [Campylobacter jejuni]
          Length = 259

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA    R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDVKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|58336899|ref|YP_193484.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM]
 gi|58254216|gb|AAV42453.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM]
          Length = 272

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVS--ILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K +F+S  ++ L+ +  ++   N   SI   +K+   +  G+      F  +   +G 
Sbjct: 1   MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIKDGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF++D   AL+  I    +K  ++   A  +   L+++ +D +      T  R+    
Sbjct: 61  VRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K   I++V  L+   + +  GTT+   +  +          + 
Sbjct: 119 VEFSKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTSADAVRKFAPKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +  AA +A + DA+  D   L          S + I     +  P   A+ +G  
Sbjct: 175 FDDYGQAFAALKADQGDAFVTDNGILAG---ILRDNSGYKIAGGTFTNQPYGIAVNKGQN 231

Query: 236 EWYNIVSWTHY 246
           E    ++    
Sbjct: 232 EMMEHINLALT 242


>gi|254932817|ref|ZP_05266176.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293584370|gb|EFF96402.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|328473972|gb|EGF44788.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes 220]
          Length = 271

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 87/250 (34%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++  +      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNTITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQTKINEA 245


>gi|229590085|ref|YP_002872204.1| putative ABC-type amino-acid transporter periplasmic solute-binding
           protein [Pseudomonas fluorescens SBW25]
 gi|229361951|emb|CAY48851.1| putative ABC-type amino-acid transporter periplasmic solute-binding
           protein [Pseudomonas fluorescens SBW25]
          Length = 282

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 4/257 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V +        +      S L D+ KRG L  G  +    +    A+G  +GFD+D  R 
Sbjct: 12  VFLFAASASLASVVQAADSKLDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFDIDIGRI 71

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +F+DPSK++++  ++  R   L + ++D+  +    T  R  +  +AF    Y +G
Sbjct: 72  VAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++        +  L  A   V       +   +       K     ++ V+ +  A 
Sbjct: 130 VGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+     L    P  +       S    A A+ +GD +W N V+   +
Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTALH 247

Query: 247 AMVTAEELGITQKNINQ 263
             +T  E    + +  Q
Sbjct: 248 EAMTGVEFPTYKASFKQ 264


>gi|153010817|ref|YP_001372031.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562705|gb|ABS16202.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 258

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       I   +         +A  L  +K+ G L+ G++     F+ V       GFD
Sbjct: 1   MKTLLSSLIAAGVGALMMLAPAHADDLEKVKQSGELRIGMSGVFPPFSFVDGQNQVVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +   P  +             L++ + D++  +   T  RE    + F  
Sbjct: 61  VDIGTEIAKRLDVKPVVVTI---AFDGIIAGLRAGKFDVVVGSMSITPEREK--AVDFAG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G+G  + +   + S+ +L  G +I V  G T++    +        +    ++ +
Sbjct: 116 PYYRGGRGIFVTETSPVKSMDELKQGKTIAVTLGETSDKWARE-----QGGWTVRTYKGI 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E+    R+ R DA   D   +      +      +  P++     +  A+ +G+ E  +
Sbjct: 171 PELLLELRSGRVDAIASDDIPILIAIKESGEKVRQLDTPELQGTDNVGIALRKGNPELKD 230

Query: 240 IVSWTHYAM 248
            ++     M
Sbjct: 231 AINKALDDM 239


>gi|241663664|ref|YP_002982024.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240865691|gb|ACS63352.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 307

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 7/245 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72
              + + +   L  IK+ G +  G     + F+         G+  +    + + +    
Sbjct: 26  STGAQAQSNDTLAKIKQSGVISVGYRESSIPFSYQADANTITGYSQEISNMIVAGVEKAV 85

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +++  P+ ++ R   LQ+  ID    +T   L R+  +   F    +  G   ++ 
Sbjct: 86  GKKLQVKLTPITSQNRISLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVK 143

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHR 190
           K  GI     L G ++   AGTT +  L           K + I+ +   +      + R
Sbjct: 144 KDSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGR 203

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             A+  D   LY  +      ++ V+    +     A  + + D  +  +       ++ 
Sbjct: 204 AVAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMK 263

Query: 251 AEELG 255
           + +  
Sbjct: 264 SGKAN 268


>gi|325978425|ref|YP_004288141.1| amino acid ABC transporter substrate binding protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178353|emb|CBZ48397.1| amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 292

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 11/225 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +  A  L +IK+ G +K G+ +    F  V   GD++G+DV F   L+  +  D   +
Sbjct: 39  GNTAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---V 95

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y+ ++   R   L S ++DI+  N   T  R     + F         G +    + IS
Sbjct: 96  EYVAVDPASRVEYLTSAKVDIILANFTVTDERAE--QVDFALPYMKVALGVVSPSSQLIS 153

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           SV  L G ++ V  GTT E      F+ +  K + + +++  E   A    R DA + D 
Sbjct: 154 SVDDLEGKTLIVGKGTTAETY----FEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           + + A     +     V +  +     +APA+ +G+T   + ++ 
Sbjct: 210 TEVLAWA--LENKGYEVGITSLGDTDTIAPAVQKGNTALLDWIND 252


>gi|299066136|emb|CBJ37319.1| glutamate/aspartate ABC transporter,periplasmic binding subunit
           [Ralstonia solanacearum CMR15]
          Length = 308

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 8/237 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSK 77
            +   L  IK+ G +  G     + F+   ++G+  G+  +    +       +     +
Sbjct: 32  QSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIVDGVKKKLGLSGLQ 91

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++  P+ ++ R   LQ+  ID    +T   L R+  +   F    +  G   ++ K  GI
Sbjct: 92  VKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKKGAGI 149

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRCDAYT 195
                L G ++   AGTT +  L           K + I+ +   +      + R  A+ 
Sbjct: 150 KDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRAVAFV 209

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            D   LY  +      S+ V++   +     A  + + D  +  +       ++T+ 
Sbjct: 210 MDEPLLYGERTKAKNQSDWVVVGTPLQTETYACMMRKDDPAFKKVADDVIADLMTSG 266


>gi|315282708|ref|ZP_07871055.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           marthii FSL S4-120]
 gi|313613644|gb|EFR87441.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           marthii FSL S4-120]
          Length = 271

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S++ S       I K   +  G++   V       + +  
Sbjct: 1   MKKGILIAVMAVVMLTLGACSSSESKEDQWERINKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSNPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMASKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQTKINEA 245


>gi|52425739|ref|YP_088876.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307791|gb|AAU38291.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 286

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 8/227 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             ++ +   S +  IKK   ++ G+ +    F  V  +G  +GFDV+  +A++  +  D 
Sbjct: 30  AASADNNAVSAIERIKKADKVRIGVFSDKPPFGYVDKDGKVQGFDVEIAKAVTKDLLGDE 89

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K +++ + A  R   L S ++DI   N   T  R+    + F         G +  +  
Sbjct: 90  NKAEFVLVEAANRAEYLLSNKVDITMANFTVTPERKEV--VNFAKPYMKVALGVVSKQDA 147

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ V+QL+  ++ +  GTT +      F  +      + FE+  E   A    R DA +
Sbjct: 148 PITDVAQLADKTLLLNKGTTADAYFTKNFPKNKS----LKFEQNTETFQALLDGRGDALS 203

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            D + L+A     + P   V + ++     +APA+ + DT+    + 
Sbjct: 204 HDNTLLFAWA--KENPGYVVAIKNLGDLDYIAPAVKKEDTDLLQWLD 248


>gi|182683628|ref|YP_001835375.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae CGSP14]
 gi|182628962|gb|ACB89910.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae CGSP14]
          Length = 286

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     D     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LDNKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|325275178|ref|ZP_08141145.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
 gi|324099665|gb|EGB97544.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
          Length = 305

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 86/237 (36%), Gaps = 8/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  IK  G +  G     + F+ +    +  G+  D   A+  A+        K++Y 
Sbjct: 28  GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138
            + ++ R   +Q+  +D+   +T   + R+  +G  F    +  G   +   K       
Sbjct: 88  LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G ++   AGTT+E  L        MK + I  +   E      + R  A+  D 
Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + L        +P++ VI     S       + +GD  +   V     A   + E+ 
Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKGDEAFKKAVDDAIVAYFKSGEVN 262


>gi|47092892|ref|ZP_00230674.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 4b H7858]
 gi|47018718|gb|EAL09469.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 4b H7858]
 gi|328466491|gb|EGF37634.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes 1816]
          Length = 271

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKTEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQTKINEA 245


>gi|312961374|ref|ZP_07775879.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311285032|gb|EFQ63608.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 282

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 4/257 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V +         +     S L  + KRG L  G  +    +    A+G  +GFD+D  R 
Sbjct: 12  VFLFAASASLAGTAQAADSKLDSVLKRGHLVVGTGSTNAPWHFQGADGKLQGFDIDIGRI 71

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +F+DPSK++++  ++  R   L + ++D+  +    T  R  +  +AF    Y +G
Sbjct: 72  VAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++        +  L  A   V       +   +       K     ++ V+ +  A 
Sbjct: 130 VGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+     L    P  +       S    A A+ +GD +W N V+   +
Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTALH 247

Query: 247 AMVTAEELGITQKNINQ 263
             +T  E    + +  Q
Sbjct: 248 EAMTGVEFPTYKASFKQ 264


>gi|57504979|ref|ZP_00370931.1| amino acid ABC transporter, amino acid-binding protein
           [Campylobacter coli RM2228]
 gi|57019251|gb|EAL55957.1| amino acid ABC transporter, amino acid-binding protein
           [Campylobacter coli RM2228]
          Length = 241

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 8/230 (3%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD 73
           + FTS +     L  IK +G L  G+   +  +A +  A G+ KGF+VD  + L+ +I  
Sbjct: 1   MAFTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILG 60

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           D +K++ + +NAK R   L +  +D +      T  R+      F    Y D  G ++ K
Sbjct: 61  DENKVKLIAVNAKTRGPLLDNGSVDAVIATFTITPERKRV--YNFSEPYYQDAVGLLVLK 118

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           +K   S++ ++GA+I V    TT+  +    K   +K     F     I AA  A R DA
Sbjct: 119 EKNYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDA 178

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           ++ D S L        +   + ILPD            + D  + N V+ 
Sbjct: 179 FSVDKSILLGY-----KDENNEILPDSFDPQSYGIVTKKDDANFSNYVND 223


>gi|327459027|gb|EGF05375.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1057]
          Length = 291

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 30/262 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSF------------STNASI-----LGDIKKRGFLKCGIN 41
           M   K  F      +  F  +             + ++       L +IKK G L+  + 
Sbjct: 1   MKLSKTIFALTTLTLAFFLVACGTSSKKDAGNKDAASSKTVKVRSLEEIKKSGKLRIAVF 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           +    F  V  NG ++G+D+     L+  +   P    Y+P++A  R   L S ++DI  
Sbjct: 61  SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+    + F         G +  K   I+   QL G ++ +  GTT E    
Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             F+ +        +++  +   A    R DA++ D + + A     +     V +  + 
Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229

Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243
               +APA+ +G+TE  N ++ 
Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251


>gi|163839930|ref|YP_001624335.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209]
 gi|162953406|gb|ABY22921.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209]
          Length = 277

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 85/227 (37%), Gaps = 10/227 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + +     IK  G +  G+     G        G++ GFD++  R +++++     KIQ+
Sbjct: 30  SGSPTFDKIKSNGKITIGVKEDQPGLGFKDPATGEYSGFDIEIARWMAASLGLSADKIQF 89

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISS 139
             + +  R  AL + Q+D+       T  R+    + F    +  GQG ++ K    I+S
Sbjct: 90  QAIASSNREQALANGQVDLYVGTYSITDKRKAL--VDFAGPYFVTGQGLLVKKDNTSINS 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G ++C   G+T    +   F           F+   +     +    DA T D +
Sbjct: 148 EKDLAGKTVCSATGSTPIQNIKAKFP----DTKTTEFDLYSKCVEQVKNGSADALTTDQA 203

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            L         P    ++    +       + +GDT     ++ T  
Sbjct: 204 ILLGYAAQ--DPDNLKVVGPPFTTEKYGIGVKKGDTALRTFLNDTLT 248


>gi|153853350|ref|ZP_01994759.1| hypothetical protein DORLON_00748 [Dorea longicatena DSM 13814]
 gi|149754136|gb|EDM64067.1| hypothetical protein DORLON_00748 [Dorea longicatena DSM 13814]
          Length = 285

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 27/297 (9%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKR----------GFLKCGINTGLVGF 47
           M K      V+ +    +     S ++    + KK             L  G +     +
Sbjct: 1   MKKRLVLLLVTAMAATTVLAGCGSKDSGSSDNGKKSSKEAKIENDDDTLIVGFDASFPPY 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                +G++ GFD+D  + +      +  K+   P++   +   L S  ID +       
Sbjct: 61  GYKDDSGEYVGFDLDLAQEVCDR---NNWKLVKQPIDWDSKDAELNSGTIDCIWNGFTMN 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKA 166
              +      +      + Q  ++    GI   + L G  + VQ  ++    L  D    
Sbjct: 118 GRED---DYTWSDPYIDNKQVVVVRSDSGIDDFAGLKGKHVEVQTDSSALAALEGDQKDL 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                                +  CDA   DI        +   P ++ IL   IS    
Sbjct: 175 AATFADLNQVAEYNTAFMDLESGACDAIAMDIGVANYQVNSRKNPDDYKILDKEISSEQY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
           A    +G+TE  + V  T   M  AE+       ++++++   +  V   L I K+ 
Sbjct: 235 AVGFKKGNTELKDKVQKTLDEM--AED-----GTVDKIAEKYADYGVPGALCIGKNG 284


>gi|220929057|ref|YP_002505966.1| extracellular solute-binding protein family 3 [Clostridium
           cellulolyticum H10]
 gi|219999385|gb|ACL75986.1| extracellular solute-binding protein family 3 [Clostridium
           cellulolyticum H10]
          Length = 290

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 11/253 (4%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K    F   ++  ++L         SIL  + +RG +  G    +     +  NG+W 
Sbjct: 1   MKKSIVCFIFLVIISVLLTACGTEKQESILDKVLERGVVNIGSGNNVPPMNYIDENGNWT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD++   A++  +     ++    +N K R   L +  +D++  N   T  R+    + 
Sbjct: 61  GFDIELSDAIAERLGVKLERVV---VNNKTRISFLANGTVDMVVSNLSHTRSRDE--QID 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVF 176
           +    Y         KK    +++ L+G  I V  G+   + +    +  +  K     F
Sbjct: 116 YVEPPYLWTGKIAYAKKGKFKNLTDLAGKKIAVDQGSNAYIAIQQEIEKVNGAKPDIQTF 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E   A +  + DA+T D   +  +        E+  +  I S       +   D++
Sbjct: 176 QSNAECFLALKQGKVDAFTQDSVIIAGVA--GKEGVEYEPIGGIYSPGLYGIGVPPNDSK 233

Query: 237 WYNIVSWTHYAMV 249
           W + +S+    ++
Sbjct: 234 WKDKISFILQDLM 246


>gi|163853360|ref|YP_001641403.1| extracellular solute-binding protein [Methylobacterium extorquens
           PA1]
 gi|163664965|gb|ABY32332.1| extracellular solute-binding protein family 3 [Methylobacterium
           extorquens PA1]
          Length = 303

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79
           +  L  +K  G +  G     V F+ +  N    G+  + C  ++ A    +  D  +++
Sbjct: 27  SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P+ +  R   + +  ID+   +T     R+      F    +     F+  + KG+  
Sbjct: 87  LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++   +GTT    + +   A  +    +  +   E        R DA+  D  
Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204

Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            L AL   +  P  + I  +  S+  P    + + D  +  +V     A+  + E
Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259


>gi|299069550|emb|CBJ40822.1| putative substrate-binding periplasmic (PBP) ABC transporter
           protein [Ralstonia solanacearum CMR15]
          Length = 298

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 89/238 (37%), Gaps = 6/238 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77
            ++  L  IK  G ++       V F+ + ANG   G+ +D C  L  AI D+      K
Sbjct: 24  ASSPTLDRIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRPDLK 83

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +QYL +    R  A+ S + D+   +T     RE    +AF    Y      ++    GI
Sbjct: 84  VQYLQVTPATRMDAIASGKADLECAST--NNARERREKVAFTIPHYIANGRMLVKTASGI 141

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             +  L G ++    G+     +    +A  +    +      E  A     +  A+  D
Sbjct: 142 HQMEDLRGKTVVSTRGSANGNLVRQLSEAGGLGITVVETADHSESFAMLADGKAQAFAMD 201

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              L  +K     P+++ I+       P A  + + D E+  ++      ++   E  
Sbjct: 202 DVLLAGMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMSRIMEDGEAE 259


>gi|325697573|gb|EGD39458.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK160]
          Length = 291

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 30/262 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFLKCGIN 41
           M   K  F      +  F  +  T+                 A  L +IKK G L+  + 
Sbjct: 1   MKLSKTIFALTTLTLAFFLVACGTSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           +    F  V  NG ++G+D+     L+  +   P    Y+P++A  R   L S ++DI  
Sbjct: 61  SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+    + F         G +  K   I+   QL G ++ +  GTT E    
Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             F+ +        +++  +   A    R DA++ D + + A     +     V +  + 
Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229

Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243
               +APA+ +G+TE  N ++ 
Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251


>gi|83719983|ref|YP_443031.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|167582027|ref|ZP_02374901.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis TXDOH]
 gi|167620192|ref|ZP_02388823.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis Bt4]
 gi|257139260|ref|ZP_05587522.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|83653808|gb|ABC37871.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
          Length = 264

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 86/252 (34%), Gaps = 19/252 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K   V+ L +   F  + +  A +L ++K+RG L+ G+      F      G+ 
Sbjct: 1   MKIASLKKLLVAGL-IGASFVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L
Sbjct: 60  VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDQRK--QTL 114

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F P   +     I  K       S+  L G  + V  GT                    
Sbjct: 115 DFSPAYTYSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E      A R DA   D   L  L   +  P       ++ S +P      +G+
Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGN 227

Query: 235 TEWYNIVSWTHY 246
            ++   ++    
Sbjct: 228 PKFAKAIADAMT 239


>gi|188583627|ref|YP_001927072.1| extracellular solute-binding protein family 3 [Methylobacterium
           populi BJ001]
 gi|179347125|gb|ACB82537.1| extracellular solute-binding protein family 3 [Methylobacterium
           populi BJ001]
          Length = 303

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 88/235 (37%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79
           +  L  +K  G +  G     V F+ +  N    G+  + C  ++ A+      D  +++
Sbjct: 27  SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLQVADAVKAHLKRDTLEVR 86

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P+ +  R   + +  ID+   +T     R+      F    +     F+  ++KG+  
Sbjct: 87  LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKREKGLDK 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++   +GTT    + +   A  +    +  +   E        R DA+  D  
Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVMDDV 204

Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            L AL  ++  P  + I  +  S+  P    + + D  +  +V     A+  + E
Sbjct: 205 LLAALVASSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYRSPE 259


>gi|312959230|ref|ZP_07773748.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
 gi|311286490|gb|EFQ65053.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
          Length = 331

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 87/245 (35%), Gaps = 11/245 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  I   G +        + F+ +   +G   G+  D   A+   +  D    
Sbjct: 46  AAELTGTLKKINDSGTITLAHRDSSIPFSYIADGSGKPVGYSHDIQVAVVDQLKKDLNKP 105

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+   D+   +T     R  +  + F    +  G   ++ K 
Sbjct: 106 DLKVKYNLVTSQTRIPLIQNGTADLECGSTTNNAER--AQQVDFTTNIFEIGTRLLVKKD 163

Query: 135 ----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                  +  + L G ++   AGTT+E  +        M  + I  +   E      + R
Sbjct: 164 KDGKPSYADFADLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGR 223

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             A+  D + L   +    +P + VI     S    A  + +GD ++   V     A+  
Sbjct: 224 AVAFMMDDALLAGEEAKAKKPDDWVITGTPQSFEAYACMVRKGDPDFKKAVDDAIVALYK 283

Query: 251 AEELG 255
           + E+ 
Sbjct: 284 SGEIN 288


>gi|168492230|ref|ZP_02716373.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           CDC0288-04]
 gi|183573551|gb|EDT94079.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           CDC0288-04]
          Length = 288

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQNLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|150403151|ref|YP_001330445.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150034181|gb|ABR66294.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 260

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 11/246 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + ++  ++ F       AS       K G L  G +     F E  A+G+  GFD
Sbjct: 5   KKLILLGLVVSLVAFSGCTEDQASAESSMTMKEGILVVGTDPTFPPFEEKNADGELVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +     +IQ++         AL++++ D +      T  R   +   F  
Sbjct: 65  IDLMKALGEKMG---LEIQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVA--FTN 119

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q   ++   + + SV  L+G  +  Q GTT E     Y +          +E +
Sbjct: 120 SYFDAAQVIAVLVDDESVQSVDDLAGKVVAAQLGTTGEYEAQHYAEELGF--EIKSYEVM 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R DA   D     A +  + +P  + ++ + ++      A    + E  +
Sbjct: 178 ADAFIDMENGRVDAVVTDD--GVAQRFLDTKPGFYKVVGEPMTAESYGLAANLDNQELID 235

Query: 240 IVSWTH 245
            ++   
Sbjct: 236 ALNAAL 241


>gi|148546355|ref|YP_001266457.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148510413|gb|ABQ77273.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 305

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  IK+ G +  G     + F+ +    +  G+  D   A+  A+        K++Y 
Sbjct: 28  GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138
            + ++ R   +Q+  +D+   +T   + R+  +G  F    +  G   +   K       
Sbjct: 88  LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G ++   AGTT+E  L        MK + I  +   E      + R  A+  D 
Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + L        +P++ VI     S       + + D  +   V     A   + E+ 
Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKEDAAFKKAVDDAIVAYFKSGEVN 262


>gi|325693724|gb|EGD35643.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK150]
          Length = 312

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 30/262 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFLKCGIN 41
           M   K  F      +  F  +  T+                 A  L +IKK G L+  + 
Sbjct: 22  MKLSKTIFALTTLTLAFFLVACGTSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 81

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           +    F  V  NG ++G+D+     L+  +   P    Y+P++A  R   L S ++DI  
Sbjct: 82  SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 138

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+    + F         G +  K   I+   QL G ++ +  GTT E    
Sbjct: 139 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 194

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             F+ +        +++  +   A    R DA++ D + + A     +     V +  + 
Sbjct: 195 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 250

Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243
               +APA+ +G+TE  N ++ 
Sbjct: 251 DPDTIAPAVQKGNTELLNYIND 272


>gi|330820727|ref|YP_004349589.1| extracellular solute-binding protein [Burkholderia gladioli BSR3]
 gi|327372722|gb|AEA64077.1| extracellular solute-binding protein [Burkholderia gladioli BSR3]
          Length = 273

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 91/251 (36%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M K    + L              +A  L DIK+ G L+         F  V   +    
Sbjct: 1   MKKTLLAATLAALTGFAALAPSLAHADRLDDIKQAGVLRVATFDSNPPFGYVDPASNHIV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD+ RAL+  +      ++    N   R   L S+++D++  N   T  R     + 
Sbjct: 61  GLDVDYARALADKLGVK---LELQSTNPANRIPFLTSRKVDLVLANFTITDERAK--QVD 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  GQ F+  K   + S  QL G  I    GTT E+ + + F         + ++
Sbjct: 116 FSIPYFSSGQQFLAKKG-VLKSKDQLDGLRIGADKGTTNEIAVREQFPKA----TVVAYD 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                 AA RA    A T D   L  L        ++ I P  I+   +   I +G+   
Sbjct: 171 DTPFAFAALRAGNVQAITQDGPKLVGLLANVPDKQKYEIPPFTITNDYMGVGIPKGEPRL 230

Query: 238 YNIVSWTHYAM 248
              V+ T   +
Sbjct: 231 VAFVNDTLKGL 241


>gi|116873171|ref|YP_849952.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|116742049|emb|CAK21173.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 271

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S + S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMVVVMLALGACSGSESKEDQWNRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSKPYMKNEQVLVTLKSSKINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIISNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+      +  A  + + D
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDPTDFAVGMRKSD 235

Query: 235 TEWYNIVSWT 244
            E    ++  
Sbjct: 236 KELQTKINKA 245


>gi|77459314|ref|YP_348821.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77383317|gb|ABA74830.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 282

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 4/248 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V +L              S L  +  RG L  G  +    +    A+G  +GFD+D  R 
Sbjct: 12  VFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARM 71

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +F+DPSK++++  ++  R   L + ++D+  +    T  R  +  +AF    Y +G
Sbjct: 72  VAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++        +  L      V       +   +       K     ++ V+ +  A 
Sbjct: 130 VGLLLPNNSKYKEIEDLQAGGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+     L    P  +       S    A A+ +GD +W N V+   +
Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLNFVNTALH 247

Query: 247 AMVTAEEL 254
             +T  E 
Sbjct: 248 EAMTGVEF 255


>gi|326317500|ref|YP_004235172.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374336|gb|ADX46605.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 298

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 6/242 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFD 73
                 AS L  IK  G +  G      GF+     G   G+ +D C     A+ + +  
Sbjct: 21  APAQEAASTLHKIKDSGAITLGHRESSFGFSYNAGTGTPVGYSIDICMRIVDAIKAELQL 80

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
               I+Y  + ++ R   +    +DI   +T   + R+  +   F P  +      ++  
Sbjct: 81  PKLDIRYQLVTSQNRIPLVAGGTVDIECGSTTNLVERQKLVA--FSPDIFRYNVRMLVRA 138

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI S++ L G ++   +GTT+   L +  K  N+    +  +   +      + R  A
Sbjct: 139 DSGIRSIADLQGKTVVATSGTTSLRLLREADKGRNLDIQQMAGKDHADSFLLVESGRAQA 198

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L  L  T   P + +I  + +     +    + D  +  +V      M+ + E
Sbjct: 199 FVLDDILLAGLVATARNPKDFLITGEPLRTENQSLMFRKDDPAFKALVDRVVTGMMQSGE 258

Query: 254 LG 255
           + 
Sbjct: 259 ME 260


>gi|152979602|ref|YP_001345231.1| extracellular solute-binding protein [Actinobacillus succinogenes
           130Z]
 gi|150841325|gb|ABR75296.1| extracellular solute-binding protein family 3 [Actinobacillus
           succinogenes 130Z]
          Length = 288

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 8/222 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +   S +  IK+   ++ G+ +    F  V  +G  +GFDV+  +AL+  +  D +K+++
Sbjct: 37  AAKTSAVERIKQADKIRIGVFSDKPPFGYVDKDGKNQGFDVEIAKALTKDLLGDENKVEF 96

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + A  R   L S +IDI   N   T  R+  +   F         G +      I+ V
Sbjct: 97  VLVEAANRAEYLLSNKIDITLANFTVTPARQEVVA--FAEPYMKVALGVVSKDGAVITDV 154

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            QL G ++ V  GTT +   +  F     +   + FE+  E   A R  R DA   D + 
Sbjct: 155 KQLEGKTLLVNKGTTADAYFSKNFP----QIKLLKFEQNTETFEALRDGRGDALAHDNAL 210

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           L+A     + P   V + ++     +A A+ + D +    ++
Sbjct: 211 LFAWA--KENPGFTVGVKELGDLDFIAGAVRKEDKDLLEWLN 250


>gi|116617694|ref|YP_818065.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096541|gb|ABJ61692.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 284

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 91/268 (33%), Gaps = 27/268 (10%)

Query: 1   MYKD---------FFVSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGIN 41
           M K           F++++ +  L  ++ S  +               IK+   +  G++
Sbjct: 4   MKKKIVVNSIVGILFIALVVMAALSLSNNSQKSKSTEQTVVKTDQWSRIKREKQITIGLD 63

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
              V       +G   GFDVD   A+  ++     K+++ P++   +   L +  ID + 
Sbjct: 64  DTFVPMGFRDKSGKLVGFDVDLATAVFKSLG---IKVKWQPIDWSMKETELNTGNIDAIW 120

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  R+    +AF    +   Q  +  KK  I+  S +    +  Q  ++ + T A
Sbjct: 121 NGYTITDDRKK--KVAFSTPYHKATQVLVTLKKSNINKFSDMQDKVLGDQTASSGDQTFA 178

Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            Y    K +      I ++  ++      A R D    D             P+++ I  
Sbjct: 179 QYPKVLKQYVKDQKVIGYDTFDKAFNDLNASRIDGLLIDEDYARYYVAHQSNPNDYTITT 238

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                +  A    + D +    V+    
Sbjct: 239 GGFPVNDNAVGFRKADKKLRQAVNKELK 266


>gi|325689405|gb|EGD31410.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK115]
          Length = 291

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 30/262 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSF------------STNASI-----LGDIKKRGFLKCGIN 41
           M   K  F      +  F  +             + ++       L +IKK G L+  + 
Sbjct: 1   MKLSKTIFALTTLTLAFFLVACGNSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           +    F  V   G ++G+D+     L+  +   P    Y+P++A  R   L S ++DI  
Sbjct: 61  SDKKPFGYVDNKGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+    + F         G +  K   I+   QL G ++ +  GTT E    
Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             F+ +        +++  +   A    R DA++ D + + A     +     V +  + 
Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229

Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243
               +APA+ +G+TE  N ++ 
Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251


>gi|323479996|gb|ADX79435.1| bacterial extracellular solute-binding protein [Enterococcus
           faecalis 62]
          Length = 276

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 1   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 61  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 116 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 236 SDNQLVQKINTA 247


>gi|229546659|ref|ZP_04435384.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis TX1322]
 gi|256854335|ref|ZP_05559699.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|307276214|ref|ZP_07557344.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX2134]
 gi|307296172|ref|ZP_07576002.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0411]
 gi|229308226|gb|EEN74213.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis TX1322]
 gi|256709895|gb|EEU24939.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|306496146|gb|EFM65726.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0411]
 gi|306507126|gb|EFM76266.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX2134]
 gi|315030505|gb|EFT42437.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX4000]
          Length = 277

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|170720286|ref|YP_001747974.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169758289|gb|ACA71605.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 305

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 85/237 (35%), Gaps = 8/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  IK+ G +  G     + F+ +    +  G+  D   A+  A+        K++Y 
Sbjct: 28  GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVEALKKQLGTDIKVRYN 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138
            + ++ R   +Q+  +D+   +T   + R     +AF    +  G   +   K       
Sbjct: 88  LVTSQTRIPLVQNGTVDLECGSTTNNVER--QQQVAFSVGIFEVGTRLLTKVKDGQPSYK 145

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L G ++   AGTT+E  L        MK + I  +   E      + R  A+  D 
Sbjct: 146 DFTDLGGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + L        +P++ VI     S       + +GD  +   V         + E+ 
Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMMRKGDDTFKKAVDDAIVGYFKSGEVN 262


>gi|218532217|ref|YP_002423033.1| extracellular solute-binding protein family 3 [Methylobacterium
           chloromethanicum CM4]
 gi|218524520|gb|ACK85105.1| extracellular solute-binding protein family 3 [Methylobacterium
           chloromethanicum CM4]
          Length = 303

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 85/235 (36%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79
           +  L  +K    +  G     V F+ +  N    G+  + C  ++ A    +  D  +++
Sbjct: 27  SGTLKKVKDTDTITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P+ +  R   + +  ID+   +T     R+      F    +     F+  + KG+  
Sbjct: 87  LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++   +GTT    + +   A  +    +  +   E        R DA+  D  
Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204

Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            L AL   +  P  + I  +  S+  P    + + D  +  +V     A+  + E
Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259


>gi|290968269|ref|ZP_06559812.1| putative histidine ABC transporter, periplasmic histidine-binding
           protein HisJ [Megasphaera genomosp. type_1 str. 28L]
 gi|290781751|gb|EFD94336.1| putative histidine ABC transporter, periplasmic histidine-binding
           protein HisJ [Megasphaera genomosp. type_1 str. 28L]
          Length = 266

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 75/249 (30%), Gaps = 13/249 (5%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K     +   ++ + +          S    I     +  G++            G  
Sbjct: 1   MKKRSINIWMTLVIVMCVAVLAGCGHKPSETTGIPD--KIIIGMDDNFPPMGFRDDQGQL 58

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +  S  +      +++  ++   +  AL+S Q+D+L      T  R+  +  
Sbjct: 59  VGFDIDVAKEASKRLG---IPVEFQSIDWDSKEAALKSGQVDVLWNGLTITPERQKVIA- 114

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F      + Q  ++     I      SG  I  Q G+++   L  +            +
Sbjct: 115 -FSKPYMKNDQLLVVRSDSPIHDKQDFSGKCIGTQEGSSSIDALNRHKDFQRSLKDVKKY 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                        R D    D   +        +P +  ++   + +      + + D  
Sbjct: 174 GDYVNAFMDLEVGRIDGVLVDS--VVGRYYMEKKPGKFKVVDKSLGEETFGIGMRKEDKP 231

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 232 LQDKMNKVM 240


>gi|315151627|gb|EFT95643.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0012]
          Length = 277

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|256959933|ref|ZP_05564104.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
 gi|293383503|ref|ZP_06629414.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis R712]
 gi|293386671|ref|ZP_06631245.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis S613]
 gi|312907121|ref|ZP_07766114.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis DAPTO 512]
 gi|312979300|ref|ZP_07790998.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis DAPTO 516]
 gi|256950429|gb|EEU67061.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
 gi|291079137|gb|EFE16501.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis R712]
 gi|291083888|gb|EFE20851.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis S613]
 gi|310626898|gb|EFQ10181.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis DAPTO 512]
 gi|311287894|gb|EFQ66450.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis DAPTO 516]
 gi|315164604|gb|EFU08621.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX1302]
 gi|315172707|gb|EFU16724.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX1346]
          Length = 273

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|227554920|ref|ZP_03984967.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis HH22]
 gi|229548745|ref|ZP_04437470.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis ATCC 29200]
 gi|255971261|ref|ZP_05421847.1| extracellular solute-binding protein [Enterococcus faecalis T1]
 gi|255973881|ref|ZP_05424467.1| extracellular solute-binding protein [Enterococcus faecalis T2]
 gi|256617689|ref|ZP_05474535.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
           4200]
 gi|256761566|ref|ZP_05502146.1| extracellular solute-binding protein [Enterococcus faecalis T3]
 gi|256957331|ref|ZP_05561502.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
 gi|256964363|ref|ZP_05568534.1| extracellular solute-binding protein [Enterococcus faecalis
           HIP11704]
 gi|257077673|ref|ZP_05572034.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
 gi|257081061|ref|ZP_05575422.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
 gi|257086158|ref|ZP_05580519.1| extracellular solute-binding protein [Enterococcus faecalis D6]
 gi|257089231|ref|ZP_05583592.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
 gi|257415372|ref|ZP_05592366.1| extracellular solute-binding protein [Enterococcus faecalis
           AR01/DG]
 gi|257418406|ref|ZP_05595400.1| extracellular solute-binding protein [Enterococcus faecalis T11]
 gi|307270137|ref|ZP_07551454.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX4248]
 gi|307271413|ref|ZP_07552687.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0855]
 gi|307284363|ref|ZP_07564528.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0860]
 gi|312901658|ref|ZP_07760928.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0470]
 gi|312905047|ref|ZP_07764172.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0635]
 gi|312951825|ref|ZP_07770716.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0102]
 gi|227175946|gb|EEI56918.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis HH22]
 gi|229306138|gb|EEN72134.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis ATCC 29200]
 gi|255962279|gb|EET94755.1| extracellular solute-binding protein [Enterococcus faecalis T1]
 gi|255966753|gb|EET97375.1| extracellular solute-binding protein [Enterococcus faecalis T2]
 gi|256597216|gb|EEU16392.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
           4200]
 gi|256682817|gb|EEU22512.1| extracellular solute-binding protein [Enterococcus faecalis T3]
 gi|256947827|gb|EEU64459.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
 gi|256954859|gb|EEU71491.1| extracellular solute-binding protein [Enterococcus faecalis
           HIP11704]
 gi|256985703|gb|EEU73005.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
 gi|256989091|gb|EEU76393.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
 gi|256994188|gb|EEU81490.1| extracellular solute-binding protein [Enterococcus faecalis D6]
 gi|256998043|gb|EEU84563.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
 gi|257157200|gb|EEU87160.1| extracellular solute-binding protein [Enterococcus faecalis
           ARO1/DG]
 gi|257160234|gb|EEU90194.1| extracellular solute-binding protein [Enterococcus faecalis T11]
 gi|306503303|gb|EFM72555.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0860]
 gi|306511908|gb|EFM80904.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0855]
 gi|306513506|gb|EFM82121.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX4248]
 gi|310630228|gb|EFQ13511.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0102]
 gi|310631626|gb|EFQ14909.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0635]
 gi|311291269|gb|EFQ69825.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0470]
 gi|315027600|gb|EFT39532.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX2137]
 gi|315031303|gb|EFT43235.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0017]
 gi|315035307|gb|EFT47239.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0027]
 gi|315148310|gb|EFT92326.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX4244]
 gi|315154252|gb|EFT98268.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0031]
 gi|315154875|gb|EFT98891.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0043]
 gi|315166989|gb|EFU11006.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX1341]
 gi|315170862|gb|EFU14879.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX1342]
 gi|315573425|gb|EFU85616.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0309B]
 gi|315576573|gb|EFU88764.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0630]
 gi|315581343|gb|EFU93534.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0309A]
 gi|329577683|gb|EGG59111.1| ABC transporter, substrate-binding protein, family 3 [Enterococcus
           faecalis TX1467]
          Length = 277

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|29375393|ref|NP_814547.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis V583]
 gi|257421055|ref|ZP_05598045.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294779830|ref|ZP_06745216.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis PC1.1]
 gi|29342853|gb|AAO80617.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecalis V583]
 gi|257162879|gb|EEU92839.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294453104|gb|EFG21520.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis PC1.1]
 gi|295113981|emb|CBL32618.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Enterococcus sp. 7L76]
          Length = 276

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 1   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 61  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 116 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 236 SDNQLVQKINTA 247


>gi|323525258|ref|YP_004227411.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323382260|gb|ADX54351.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 314

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 86/255 (33%), Gaps = 14/255 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           +   +S   +  L       +A          L  + K   +  G     V F+   AN 
Sbjct: 13  RRGAISAFAVFGLVALHAPNDARAAEAELTGTLLKVSKERVITIGYRDASVPFSYYDANQ 72

Query: 55  DWKGFDVDFCRALSSAIFDDP----SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+ +D    +   I  +      K++ +P+ ++ R   LQ+  ID    +T     R
Sbjct: 73  HPVGYSIDIANLIVERIKTEIKLPDLKVRTIPITSQNRISLLQNGTIDFECTSTTNNAER 132

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
             +  ++F    +  G   ++  K GI   + L   ++ V AGTT+E  L       +M 
Sbjct: 133 --AQQVSFSNTFFVIGTRLLVRTKSGIKDFADLKDKTVVVGAGTTSEKILRKMNVEKSMN 190

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   E        R  A   D + L   +     P ++ I+    +       +
Sbjct: 191 MDVISAKDHTESFLMLSTGRAKAMMMDDALLAGERAKARNPEDYEIVGTPQTYESYGCML 250

Query: 231 IQGDTEWYNIVSWTH 245
            + D     ++    
Sbjct: 251 RKNDAAMKAVMDAAI 265


>gi|149003314|ref|ZP_01828203.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP14-BS69]
 gi|147758497|gb|EDK65495.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP14-BS69]
          Length = 290

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     ++    L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI+  N 
Sbjct: 61  KLFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDIILANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|227514519|ref|ZP_03944568.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus fermentum ATCC 14931]
 gi|227087076|gb|EEI22388.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus fermentum ATCC 14931]
          Length = 285

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 90/259 (34%), Gaps = 18/259 (6%)

Query: 1   MYKD---FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +    F + +L +  +  +        +        I+KRG +  G++   V     +
Sbjct: 1   MKRLKYLFVLVLLVIPAVLLSGCESVTQRAGTQDTWSRIEKRGKVIVGLDDSFVPMGFRE 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   G+D+D  +A+         K+ +  ++   +   L++  ID++      T  R 
Sbjct: 61  RDGKLVGYDIDLAKAVFKQYG---IKVDFQTIDWSMKETELKNGTIDLIWNGYSMTPERA 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +   F      + Q  +  K+  I++ + + G  + VQ G+T    L +Y K    K 
Sbjct: 118 KQVA--FSRPYLLNRQVLVTKKRDHINNFNDMKGKVLGVQNGSTGMTDLDEYPKLLKDKI 175

Query: 172 H---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLA 227
               PI+++          A+R      D                +   + + +     A
Sbjct: 176 KGKSPILYDTFPNAFIDLNANRIQGILMDEVYANYYIQHQANAKSYSTYISNKMGADYFA 235

Query: 228 PAIIQGDTEWYNIVSWTHY 246
             + +GD      V+    
Sbjct: 236 VGMRKGDKTLKKKVNEGLK 254


>gi|184154981|ref|YP_001843321.1| glutamine ABC transporter substrate binding component
           [Lactobacillus fermentum IFO 3956]
 gi|260663376|ref|ZP_05864267.1| glutamine ABC transporter substrate binding component
           [Lactobacillus fermentum 28-3-CHN]
 gi|183226325|dbj|BAG26841.1| glutamine ABC transporter substrate binding component
           [Lactobacillus fermentum IFO 3956]
 gi|260552228|gb|EEX25280.1| glutamine ABC transporter substrate binding component
           [Lactobacillus fermentum 28-3-CHN]
 gi|299782993|gb|ADJ40991.1| Glutamine ABC transporter substrate binding component
           [Lactobacillus fermentum CECT 5716]
          Length = 285

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 18/259 (6%)

Query: 1   MYKD---FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +    F + +L +  +  +        +        I+KRG +  G++   V     +
Sbjct: 1   MKRLKYLFVLVLLVIPAVLLSGCESVTQRAGTQDTWSRIEKRGKVIVGLDDSFVPMGFRE 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   G+D+D  +A+         K+ +  ++   +   L++  ID++      T  R 
Sbjct: 61  RDGKLVGYDIDLAKAVFKQYG---IKVDFQTIDWSMKETELKNGTIDLIWNGYSMTPERA 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +   F      + Q  +  KK  I++ + + G  + VQ G+T    L +Y K    K 
Sbjct: 118 KQVA--FSRPYLLNRQVLVTKKKDHINNFNDMKGKVLGVQNGSTGMTDLDEYPKLLKDKI 175

Query: 172 H---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLA 227
               PI+++          A+R      D                +   + + +     A
Sbjct: 176 KGKSPILYDTFPNAFIDLNANRIQGILMDEVYANYYIQHQANAKSYSTYISNKMGADYFA 235

Query: 228 PAIIQGDTEWYNIVSWTHY 246
             + +GD      V+    
Sbjct: 236 VGMRKGDKTLKKKVNEGLK 254


>gi|116695573|ref|YP_841149.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113530072|emb|CAJ96419.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 312

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 8/240 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFD 73
              ST + +L  I++ G +  G     + F+     G   G+ VD C   + A    +  
Sbjct: 36  ALASTQSPVLDKIRESGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQQLGL 95

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              K++++PL  + R  A+ +  +D+       +L R+  +   F    Y      ++  
Sbjct: 96  KDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVA--FSVSHYVSTVRMLVRA 153

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI S   L G ++   AG+T +  +      +      +  +   E      + R  A
Sbjct: 154 DSGIRSFGDLRGKTVVTSAGSTGDRHVRRMKAQYGYHD--VYAKDHGESFLLLESGRAQA 211

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   L  L+     PS++VI+   +S    A  + + D EW  +V           E
Sbjct: 212 FVMDDVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQALANTFAGPE 271


>gi|322378591|ref|ZP_08053031.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter suis HS1]
 gi|322380679|ref|ZP_08054824.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter suis HS5]
 gi|321146889|gb|EFX41644.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter suis HS5]
 gi|321148999|gb|EFX43459.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Helicobacter suis HS1]
          Length = 278

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 17/247 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            FF     L+ L     S + S     L  IK+RG L+ G+ +    F  V + G ++GF
Sbjct: 6   KFFGVFSALVALSLVGCSDHKSKAQEGLSAIKERGILRVGVFSDKPPFGFVDSKGQYQGF 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D  KIQ++P+ A  R   L++ ++D++  N   T  RE    + F 
Sbjct: 66  DVYIAKRMAKDLLGDAKKIQFIPVEAAARVEFLKANKVDVIMANFTKTREREAV--VDFA 123

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY-HPIVF 176
                   G +  K   I SV+ L      + V  GTT     AD++ + N  Y H + +
Sbjct: 124 KPYMKVALGVVS-KGGVIKSVADLKSKNQPLIVNKGTT-----ADFYFSRNYPYIHLLKY 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  E   A + +R  A   D + L+A       P   V +P++  +  +APA+ +GD  
Sbjct: 178 DQNTETFLALKNNRGIALAHDNTLLFAW--VKQNPEFKVGIPNLGEQDVIAPAVKKGDKA 235

Query: 237 WYNIVSW 243
             + +  
Sbjct: 236 LLDWLDQ 242


>gi|188589766|ref|YP_001920425.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188500047|gb|ACD53183.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 268

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 10/251 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   VS +  I +   +  +N         +  +  G++   V       +G+  GFDV
Sbjct: 7   KKLLIVSCVATIGVNLVACKSNKQ--ESASSKNEIIIGMDDTFVPMGFKDGSGETVGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+   +      +++  ++   +   L +  ID++      T  R+    + F  +
Sbjct: 65  DLAKAVGEKLNKK---VKFQSIDWSMKESELNNGNIDLIWNGYSITDERKE--NVEFSKV 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFERV 179
              + Q  I      I+S + L  A +  Q  ++    +       +     + + FE  
Sbjct: 120 YLNNRQVIITLADSKINSKNDLINAKVGAQNQSSAVDAIKADGDMMSKFDGGNVVTFETN 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      A R DA   D   L           ++ IL D       A  I +GDT +  
Sbjct: 180 NDALMDLEAGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGAEDYAVGIKKGDTSFVQ 238

Query: 240 IVSWTHYAMVT 250
             +    +++ 
Sbjct: 239 EFNNALNSVIE 249


>gi|268678766|ref|YP_003303197.1| extracellular solute-binding protein family 3 [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268616797|gb|ACZ11162.1| extracellular solute-binding protein family 3 [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 266

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 84/251 (33%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K    ++L ++ L   +        S L  I ++G L  G+  G + F      G+  
Sbjct: 1   MKK-LLAALLVMLGLNAMADDINLWQKSTLNSILQKGELTVGLEPGYMPFEMKDKQGNVI 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD    ++ A+      ++ +P         L + + DI+      T  R  +L + 
Sbjct: 60  GFDVDIANEMAKAMGVK---LKLVPTAWDGIIAGLLTGKYDIIISGMTITQER--NLKIN 114

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIV 175
           F       GQ  +  KK      S L      +      T E+     FK          
Sbjct: 115 FADPYISVGQTILAPKKHAGKKWSDLDKPEYTIVTKIGVTGEIATRKMFKKAK----IRT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE   +          D    D               + V L D ++  PL  A+ +GD 
Sbjct: 171 FETEADAAQEVLNGNADGLVYDKPYNAIFFA-EKGGDKLVHLSDELTYEPLGFAVRKGDP 229

Query: 236 EWYNIVSWTHY 246
           ++ N ++    
Sbjct: 230 DFLNWLNNFLN 240


>gi|315145195|gb|EFT89211.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX2141]
 gi|315161882|gb|EFU05899.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0645]
          Length = 277

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKVKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|300859857|ref|ZP_07105945.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TUSoD Ef11]
 gi|300850675|gb|EFK78424.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TUSoD Ef11]
          Length = 276

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 1   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 61  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K K I++ S + G  + VQ G++         D  K       
Sbjct: 116 VQFTQPYMTNDQVLVSLKVKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 236 SDNQLVQKINTA 247


>gi|224008546|ref|XP_002293232.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971358|gb|EED89693.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 41/303 (13%)

Query: 27  LGDIKKRGFLKCGI-NTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           L  +++R  L+CGI      GF +        +GF+VD C+A+++A        + +P  
Sbjct: 1   LEALQERKVLRCGIHKYDSRGFISFNNETNTREGFEVDLCKAVAAASLGSNFSYELVPTT 60

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREIS-----LGLAFRPITYFDGQGF-----IMHKK 134
              RF  L S + D+L  +T  T  R++      +G +F     + G  +      +   
Sbjct: 61  GLTRFADLASGEFDVLVASTTHTFDRDVHESSTGMGFSFSTPYLYGGMTYNGVPEFVKCA 120

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +S+V   +G  IC   GTT   T  + F A N     ++ +   E        +C+  
Sbjct: 121 DELSAVGDCAGILICSILGTTWYETTKELFPASN----IVLTKEQGESFQNLINGKCNVI 176

Query: 195 TG---DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            G   +   +       + P  +       +K PLA     GD E+  +V W    ++ A
Sbjct: 177 QGEQYEAPEVVVRGFGYEGP--YGQGKTSFTKDPLAMVTRDGDPEFAALVEWVLQTLILA 234

Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311
           E     ++NI  ++ DT           +     G+ +          +  +GNYGE++ 
Sbjct: 235 E-----KQNITMMAADTF---------AESVEFFGKDM------FQNALAAVGNYGEIYT 274

Query: 312 RNL 314
           R+L
Sbjct: 275 RHL 277


>gi|240140776|ref|YP_002965256.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Methylobacterium
           extorquens AM1]
 gi|240010753|gb|ACS41979.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Methylobacterium
           extorquens AM1]
          Length = 303

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 7/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79
           +  L  +K  G +  G     V F+ +  N    G+  + C  ++ A    +  D  +++
Sbjct: 27  SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P+ +  R   + +  ID+   +T     R+      F    +     F+  + KG+  
Sbjct: 87  LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++   +GTT    + +   A  +    +  +   E        R DA+  D  
Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVMDDV 204

Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            L AL   +  P  + I  +  S+  P    + + D  +  +V     A+  + E
Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259


>gi|187929545|ref|YP_001900032.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|309781680|ref|ZP_07676413.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp.
           5_7_47FAA]
 gi|187726435|gb|ACD27600.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
 gi|308919321|gb|EFP64985.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp.
           5_7_47FAA]
          Length = 307

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 7/245 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72
              + + +   L  IK+ G +  G     + F+         G+  +    + + +    
Sbjct: 26  STGAQAESNDTLAKIKQSGVISVGYRESSIPFSYQADANTITGYSQEISNMIVAGVEKAV 85

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +++  P+ ++ R   LQ+  ID    +T   L R+  +   F    +  G   ++ 
Sbjct: 86  GKKLQVKLTPITSQNRISLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVK 143

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHR 190
           K  GI     L G ++   AGTT +  L           K + I+ +   +      + R
Sbjct: 144 KDSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGR 203

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             A+  D   LY  +      ++ V+    +     A  + + D  +  +       ++ 
Sbjct: 204 AVAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMK 263

Query: 251 AEELG 255
           + +  
Sbjct: 264 SGKAN 268


>gi|157164816|ref|YP_001466613.1| surface antigen, CjaA [Campylobacter concisus 13826]
 gi|112800727|gb|EAT98071.1| surface antigen, CjaA [Campylobacter concisus 13826]
          Length = 285

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 110/277 (39%), Gaps = 22/277 (7%)

Query: 1   MYK-DFFVSILCLIILFF----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K  FF+  L   +              + S     +  IK+RG+++ G+ +    F  
Sbjct: 1   MRKFKFFLLALVATVFLTGCGDDKSADKAAASNQTDAIAKIKERGYVRIGVFSDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G  +G+D+ F + ++  +  D SK+++  + A  R   L + ++DI   N   T  
Sbjct: 61  VDKDGKNQGYDIYFAKRIAKDLLGDESKVKFELVEAAGRVEVLTADKVDITLANFTKTPE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R  +  + F         G +  +   I SV +L   ++ V  GTT +     +F  +  
Sbjct: 121 R--AQVVDFALPYMKVSLGIVSPEGAVIKSVDELKDKTLIVNKGTTADA----FFTKNYP 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + +++  E  AA    R  A   D + L+A     + P   V +  +     +APA
Sbjct: 175 DIKLLKYDQNTETFAALVDKRGAALAHDNALLFAWA--KETPGFVVGVEALGDVDVIAPA 232

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
           + +G+      ++     ++   +     K+ +   K
Sbjct: 233 VKKGNKALLEWIN---NEIIELGKENFFHKDYDATLK 266


>gi|304415625|ref|ZP_07396229.1| polar amino acid ABC transporter periplasmic amino acid-binding
           subunit [Candidatus Regiella insecticola LSR1]
 gi|304282523|gb|EFL91082.1| polar amino acid ABC transporter periplasmic amino acid-binding
           subunit [Candidatus Regiella insecticola LSR1]
          Length = 275

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/328 (18%), Positives = 109/328 (33%), Gaps = 65/328 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M        L    L   S + N   L  IKK G ++  +      F  V +      G+
Sbjct: 1   MKHFVIAITLFFTSLLIASCTPNTDKLDAIKKEGVIRIAVFDSNPPFGYVDSQTNKLVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   AL++A+      ++    N   R   LQSK++D+++ N   T  R     + F 
Sbjct: 61  DVDIANALANALGVK---LELRATNPANRIALLQSKKVDLIAANFTITDERAK--EVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   ++   I    GT  E+TL +++         I ++  
Sbjct: 116 VPYFATGQKFIARKG-VLKTAEDINNLRIGADKGTVQEITLREHYPTAK----VISYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237
                A R     A T D S L  L         ++  I P  I+K     A+ +G+   
Sbjct: 171 PLAFVALRNGNVQAITQDDSKLIGLLGNISNEQKADFEISPFSITKEYQGVAVAKGEKRL 230

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
            + ++                                  + +++  +  +          
Sbjct: 231 IDAINVA-------------------------------LIKLEQEGDAAK---------- 249

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
                      ++ R  G +S   +PRG
Sbjct: 250 -----------IYHRWFGPESTAPLPRG 266


>gi|104773644|ref|YP_618624.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422725|emb|CAI97352.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 281

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 98/257 (38%), Gaps = 17/257 (6%)

Query: 1   MYKDF--FVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M +      +I+ +++L       S S ++S    +K+   +  G+      F+ +   +
Sbjct: 1   MARKLRELTAIMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VD  RA++  I     K++   ++ K R + L+   +D +      T  R   
Sbjct: 61  GKATGFEVDLARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKY 171
             + F    +  G+  I+ KK  ++S+   + +        G+T +  +  Y        
Sbjct: 121 --INFSDTYFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA---- 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I ++       A +  +  A   D + L  L   +       +LPD  +  P    I 
Sbjct: 175 RVIFYDDYGSCYNALKTGKASAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIK 232

Query: 232 QGDTEWYNIVSWTHYAM 248
           +G+ ++   V+     +
Sbjct: 233 RGEDKFTAEVNQALKVL 249


>gi|291287601|ref|YP_003504417.1| extracellular solute-binding protein family 3 [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290884761|gb|ADD68461.1| extracellular solute-binding protein family 3 [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 269

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +   V  L L +        N     S L  I K G  K G++ G + F      G+ 
Sbjct: 1   MKRVLLVLCLMLTMAVSAVAKDNDDQPVSALDSIVKSGVFKVGLDPGYMPFEMRDKKGEL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  + ++ ++      ++ +         AL + + D++      T LR  +L +
Sbjct: 61  IGFDIDLAKDMAKSMGVK---LEIVTTAWDGIIPALLTGKFDLIMGGMTVTQLR--NLRV 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYH 172
            F       GQ  I++KK    + S   L+     V A   TT ++ ++ Y         
Sbjct: 116 NFADPYIVVGQTIIINKKVADKVKSYKDLNDPKYTVCAKLGTTGDIAISKYMPNAKH--- 172

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +E   E        R DA+  D+         +     H  L +  +  PLA A+ +
Sbjct: 173 -RQYETEAEGMMEVVNGRVDAFVYDLPPNAIFASKHKERVVH--LEEPFTFEPLAFAVRR 229

Query: 233 GDTEWYNIVSWTHY 246
           GD ++ N ++    
Sbjct: 230 GDYDFVNWINNYLQ 243


>gi|257870690|ref|ZP_05650343.1| amino acid-binding protein Abp [Enterococcus gallinarum EG2]
 gi|257804854|gb|EEV33676.1| amino acid-binding protein Abp [Enterococcus gallinarum EG2]
          Length = 267

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 8/249 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    +L F +   ++        +  +  G++   V        GD  GFD
Sbjct: 1   MKKIGLTLLAGASLLLFAACGNSSEKAESAADKEEVIVGLDDTFVPMGFQDDQGDIVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+        +K+++  ++   +   L +  ID++      T  RE    + F  
Sbjct: 61  VDLAKAVFDLTG---TKVKFQAIDWSMKETELDNGTIDMIWNGYTKTEAREK--KVLFSD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177
               + Q  +  K   I+S   +    +  Q G++   T     +  K         ++ 
Sbjct: 116 TYMENKQVLVTAKDSNITSFDAMKDKVLGAQEGSSGYDTFNNQPEVLKDIVADNEATLYA 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E        R D    D            +  ++ ++         A  + + D   
Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTKKADDYNVIESPFKAENFAVGVRKDDQAL 235

Query: 238 YNIVSWTHY 246
            + ++    
Sbjct: 236 ADKINEGLK 244


>gi|241664891|ref|YP_002983251.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240866918|gb|ACS64579.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 298

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 7/243 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIF 72
             +  T + +L  I+  G ++       V F+ V   G   G+ +D C     AL  A+ 
Sbjct: 20  ALALPTTSPVLDRIRDTGAVRLAYRENSVPFSYVDG-GKPVGYSIDLCSRLVEALKVAVK 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                IQY+P+    R  A+   + D+   +T     RE    +AF    Y      ++ 
Sbjct: 79  RADLNIQYVPVTPATRIAAITEGKADLECGST--NNTRERREKVAFTIPHYIASSRMLVK 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GI     L+  ++    G+T    +     A  +K + +      E      A + D
Sbjct: 137 TSSGIHRWEDLNNKTVVSTRGSTNGGQIRAMADARVLKVNVVEARDHTEAFGLVVAGKAD 196

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D   LY  + T+  P+++ ++   ++ +P A  + + D E+  ++      M+   
Sbjct: 197 AFAMDDVLLYGFRATSPNPADYTVVGSNLAVAPYAIMLSKDDPEFKKVIDLAMSRMILDG 256

Query: 253 ELG 255
           E  
Sbjct: 257 EAE 259


>gi|26987807|ref|NP_743232.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
 gi|24982504|gb|AAN66696.1|AE016297_10 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
          Length = 306

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  IK+ G +  G     + F+ +    +  G+  D   A+  A+        K++Y 
Sbjct: 29  GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 88

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138
            + ++ R   +Q+  +D+   +T   + R+  +G  F    +  G   +   K       
Sbjct: 89  LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 146

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G ++   AGTT+E  L        MK + I  +   E      + R  A+  D 
Sbjct: 147 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 206

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + L        +P++ VI     S       + + D  +   V     A   + E+ 
Sbjct: 207 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKKAVDDAIVAYFKSGEVN 263


>gi|222109926|ref|YP_002552190.1| family 3 extracellular solute-binding protein [Acidovorax ebreus
           TPSY]
 gi|221729370|gb|ACM32190.1| extracellular solute-binding protein family 3 [Acidovorax ebreus
           TPSY]
          Length = 266

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 77/250 (30%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55
           M K   V++L L  +         +               +  G++             +
Sbjct: 1   MKKFAAVALLTLGAVLVGCSKQEPAAPAAAPAPAPAAVTKIVVGLDDNFPPMGFRDEKNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  +  +  +  +   +++ P++   +   L  K++D L      T  R+    
Sbjct: 61  LVGFDIDMAKEAAKRLGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERK--QN 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  ++     I + + L+G  +  Q G++    +               
Sbjct: 116 ILFTAPYMENHQIIVVPAGSVIKAKADLAGKVVGAQEGSSAVDAIKKEEAVFKSFKELKT 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F             R +A   D   +        +P ++ +L D          + + DT
Sbjct: 176 FGDNVTALMDLTTGRLEAVVVDE--VVGRYYVAKKPDQYAVLDDNFGTEEYGVGVRKDDT 233

Query: 236 EWYNIVSWTH 245
           E +  +    
Sbjct: 234 ELHGKLDKAL 243


>gi|153952077|ref|YP_001398009.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939523|gb|ABS44264.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. doylei 269.97]
          Length = 259

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R +A++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVNAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|32266980|ref|NP_861012.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Helicobacter hepaticus ATCC 51449]
 gi|32263032|gb|AAP78078.1| probable ABC-type amino-acid transporter periplasmic solute-binding
           protein [Helicobacter hepaticus ATCC 51449]
          Length = 260

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 8/242 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61
           K         + L   +   NA +L DIKK+  L  G+   +  FA +       KGF++
Sbjct: 8   KRLLKVAGLFLFLSMFALQANAGMLEDIKKKDELVVGVKNDIPHFALLDQKTKEIKGFEI 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  I  + +K++ + +NAK R   L +  ID++      T  R+ +    F   
Sbjct: 68  DVAKLLAKHILGNENKLKLVAVNAKTRGPLLDNGSIDVVIATFTITPERKRT--YNFSEP 125

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y D  G ++ K+KG  S++ +  A+I V    T++  +A   K   +      F     
Sbjct: 126 YYKDSVGLLVLKEKGYKSLADMKDATIGVAQAATSKRAIASAAKKLGINVKFNEFPDYPS 185

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           I AA  A R DA++ D S L              IL D            + D E+   +
Sbjct: 186 IKAALDAKRIDAFSVDKSILLGYVDKKS-----EILSDSFEPQEYGIVSPKKDKEFAAFI 240

Query: 242 SW 243
             
Sbjct: 241 DT 242


>gi|115360990|ref|YP_778127.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115286318|gb|ABI91793.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 313

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 12/245 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75
           + +     L  ++  G +  G     + F+ + A     G+ ++ C+AL S+I    +  
Sbjct: 38  APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++P+ +  R  A+ S  +D+   +T   L R     +AF PI +  G   ++ +  
Sbjct: 98  LTIRWVPVTSDNRIDAVVSGNVDLECGSTTSNLER--QQRVAFSPIIFVAGTKVMVKRGS 155

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L+   + V AGTT E  L D      +     V     +  A   + R DA+ 
Sbjct: 156 PIRSFRDLAAKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVASGRADAFA 215

Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   LY L      +  ++ ++ D +S  P      + D +   +V  T       EEL
Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTF------EEL 269

Query: 255 GITQK 259
            +  +
Sbjct: 270 AVDGE 274


>gi|12831456|gb|AAK08611.1| GtpB [Agrobacterium tumefaciens]
          Length = 289

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 10/247 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      ++  +  L   S   +A  L   IK  G ++ G+      F     +G   G 
Sbjct: 29  MISRTATALGTIAALMLASAPASAQTLPKAIKDAGIIRIGVKCDSPPFGASGTDGKPAGI 88

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  + +  A F   +K +   +    R  +L   +ID++      T  RE    + + 
Sbjct: 89  EIDIAKQIGIAAFGSANKAELSCVATDARIPSLTGGKIDLIIATLGKTPSRE--QVIDYS 146

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I Y+     I+ K+  +  ++ L G S+ +  G +    L +           I     
Sbjct: 147 NIYYWGSSRVIVPKESKVQKLADLDGKSMLIIKGGSQLKWLKERIP----TLEFIQLNTN 202

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  R D Y GD   +  L  +     +   L + +        I +G+ E   
Sbjct: 203 ADNLQALQQGRADGYVGDAITIATLASSYP---QFRALEEPVDLGFNGVGIRKGEDELKA 259

Query: 240 IVSWTHY 246
            V+    
Sbjct: 260 FVNGVLK 266


>gi|315159959|gb|EFU03976.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0312]
          Length = 277

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD   A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLANAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|89091825|ref|ZP_01164780.1| putative ABC transporter periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
 gi|89083560|gb|EAR62777.1| putative ABC transporter periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
          Length = 275

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 87/251 (34%), Gaps = 7/251 (2%)

Query: 1   MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       I    I +  +S +  A  L ++ KRG L CG+            +    GF
Sbjct: 1   MKLLKLAGIAASAIAVMASSVTAQADQLDEVIKRGTLNCGVVLDFPPMGYFDKDNKPAGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+C  L++A+    + +    L   +R  +L S + D++  +T  TL R  S+G  F 
Sbjct: 61  DVDYCNDLAAALGVKSNVLN---LTWGDRIPSLVSGKTDVVIGSTSDTLERAKSVG--FT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFER 178
              +      I  K   I+S + L    +    GTT E     Y +     K +   F+ 
Sbjct: 116 YPYFVFKFQTISKKGTPINSFADLKNVKVGAALGTTYETEYLAYAEKMGWGKDNYTAFKS 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        + DA     + +     T +                +     + +  W 
Sbjct: 176 ENDAYLGLYQGKVDAIISTNTNIATKLQTKEFADYVAGPYVPNYDDVVGLIAKRSEVAWI 235

Query: 239 NIVSWTHYAMV 249
           N ++      +
Sbjct: 236 NYLNLFLIHQI 246


>gi|121534019|ref|ZP_01665845.1| extracellular solute-binding protein, family 3 [Thermosinus
           carboxydivorans Nor1]
 gi|121307530|gb|EAX48446.1| extracellular solute-binding protein, family 3 [Thermosinus
           carboxydivorans Nor1]
          Length = 254

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 7/216 (3%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  +  G++             +  GFDVD  +  +  +     ++++ P++   +   L
Sbjct: 26  KKKIVVGLDDNFPPMGFRDDKNNIVGFDVDMAKEAAKRLG---MEVEFKPIDWNSKEAEL 82

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
             K++D+L      T  R+ ++   F      + Q  +++    I S + L+G  + VQ 
Sbjct: 83  NGKRVDVLWNGLTITEKRKENIA--FTKPYMENRQIIVVNANSPIKSKADLAGKVVGVQD 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+++   +     A         +          +A R DA   D   +        +P 
Sbjct: 141 GSSSVEAVEKDAAALKSFKELKKYPDNVAALMDLKAGRLDAVVVDE--IVGRYYIAKKPG 198

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           E+ IL D          + + D E  + +      M
Sbjct: 199 EYAILADNFGSEEYGVGLRKDDKELLDKLQKVLDEM 234


>gi|91784493|ref|YP_559699.1| ABC glutamate/aspartate transporter, periplasmic ligand binding
           protein [Burkholderia xenovorans LB400]
 gi|91688447|gb|ABE31647.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 292

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 87/256 (33%), Gaps = 11/256 (4%)

Query: 8   SILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             L        + S +A      L  I   G +  G+    + F+     G   G+    
Sbjct: 1   MALAAFGAVSLAGSVHADELTGTLKKIHDDGVVVLGVREASIPFSYFDGKGT-VGYSQTI 59

Query: 64  C----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
                  +   +     K+  + + +  R   L + QID+   +T  T+ RE      F 
Sbjct: 60  ALQIVDEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAA--FS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +      I  K  GI+    L+G ++   AGT+ E  L       ++          
Sbjct: 118 DSFFQYAVRMIARKSSGITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARDH 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +  R  A+  D   +Y  K T+ RP + V+    +     A    +GD  + N
Sbjct: 178 LEAFGAVKDDRAVAFVMDEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPFRN 237

Query: 240 IVSWTHYAMVTAEELG 255
           +V+       T+ E  
Sbjct: 238 LVNGVIARGQTSGEAE 253


>gi|121593167|ref|YP_985063.1| extracellular solute-binding protein [Acidovorax sp. JS42]
 gi|120605247|gb|ABM40987.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 295

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 77/250 (30%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55
           M K   V++L L  +         +               +  G++             +
Sbjct: 30  MKKFAAVALLTLGAVLVGCSKQEPAAPAAAPAPAPAAVTKIVVGLDDNFPPMGFRDEKNE 89

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  +  +  +  +   +++ P++   +   L  K++D L      T  R+    
Sbjct: 90  LVGFDIDMAKEAAKRLGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERK--QN 144

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F      + Q  ++     I + + L+G  +  Q G++    +               
Sbjct: 145 ILFTAPYMENHQIIVVPAGSAIKAKADLAGKVVGAQEGSSAVDAIKKEEAVFKSFKELKT 204

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F             R +A   D   +        +P ++ +L D          + + DT
Sbjct: 205 FGDNVTALMDLTTGRLEAVVVDE--VVGRYYVAKKPDQYAVLDDNFGTEEYGVGVRKDDT 262

Query: 236 EWYNIVSWTH 245
           E +  +    
Sbjct: 263 ELHGKLDKAL 272


>gi|289168136|ref|YP_003446405.1| ABC transporter substrate binding lipoprotein-amino acid transport
           [Streptococcus mitis B6]
 gi|288907703|emb|CBJ22540.1| ABC transporter substrate binding lipoprotein-amino acid transport
           [Streptococcus mitis B6]
          Length = 279

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 13/254 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           K   + ++ L+ LF T+ +  AS          +++G +  G +   V     + NG + 
Sbjct: 4   KKIALVLVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +     K+Q+ P++   +   LQ+  ID +      T  R     +A
Sbjct: 64  GFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K + I SV  +   ++  QAG++  L      D  K H       
Sbjct: 119 FSIPYMENQQVLVTKKSQWIHSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNHVKDQKAN 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++   E     +  R DA   D         +    +++ +          A  +   D
Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPAD 238

Query: 235 TEWYNIVSWTHYAM 248
                 ++    A+
Sbjct: 239 KRLLQALNQAFIAL 252


>gi|325125286|gb|ADY84616.1| Glutamine ABC transporter solute-binding component [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 270

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 95/246 (38%), Gaps = 11/246 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64
              +L  ++    S S ++S    +K+   +  G+      F+ +   +G   GF+VD  
Sbjct: 1   MAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDLA 60

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA++  I     K++   ++ K R + L+   +D +      T  R     + F    + 
Sbjct: 61  RAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYFM 118

Query: 125 DGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G+  I+ KK  ++S+   + +        G+T +  +  Y          I ++     
Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPK----DRVIFYDDYGSC 174

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A +A + +A   D + L  L   +       +LPD  +  P    I +G+ ++   V+
Sbjct: 175 YNALKAGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEVN 232

Query: 243 WTHYAM 248
                +
Sbjct: 233 QALKVL 238


>gi|121602735|ref|YP_988960.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Bartonella
           bacilliformis KC583]
 gi|121602769|ref|YP_988990.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Bartonella
           bacilliformis KC583]
 gi|120614912|gb|ABM45513.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Bartonella
           bacilliformis KC583]
 gi|120614946|gb|ABM45547.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Bartonella
           bacilliformis KC583]
          Length = 302

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   V I   II    S +      L  IK+ G +  G+     G A    NG + GF
Sbjct: 1   MRRSLSVLITTAIIGLIVSVAHAQNDTLERIKQTGRITLGVRESS-GLAYALGNGRYTGF 59

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
             +    + + I      P +I+YLP+ ++ R   LQ+   D    +T     R     +
Sbjct: 60  HTEMAENIINDISKKIGKPIRIRYLPITSQNRIPLLQNNTYDFECGSTTNDTARGR--SV 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF   TY +     + K  GI S+  L+G +I    GTT    +    +A N+ +  I  
Sbjct: 118 AFAYTTYVEEVRIAVKKDSGIKSIQDLNGKTIATTTGTTAVQLIRQNGRAKNINFRVING 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               +      + R DA+  D S L      +  PS+++IL  ++S  P+A  +   D  
Sbjct: 178 RDHADSFLLLESGRADAFIMDSSILAGSISRSRNPSDYMILDAVLSVEPIACMLRLEDKN 237

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +   ++ +  + +    L 
Sbjct: 238 FEQAINDSIVSQIKDGSLE 256


>gi|238753989|ref|ZP_04615348.1| Extracellular solute-binding protein, family 3 [Yersinia ruckeri
           ATCC 29473]
 gi|238707741|gb|EEQ00100.1| Extracellular solute-binding protein, family 3 [Yersinia ruckeri
           ATCC 29473]
          Length = 278

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 90/246 (36%), Gaps = 13/246 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
           K   +++  L  L   S    A  L DIK+ G ++  +      F  +   +    G+DV
Sbjct: 2   KHHAIALTLLASLVTLSGQAQADKLDDIKQAGVVRIAVFDSNPPFGYIDEQSKKLVGYDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++  +      ++    N   R   L SK++D+++ N   T  R     + F   
Sbjct: 62  DVANAIAKDLGVK---LELKATNPANRIPLLASKKVDLIAANFTITDERAK--QVNFSLP 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  GQ FI  K   +++   +    I    GT  E+TL D +         I ++    
Sbjct: 117 YFATGQKFIARKG-VLTTPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPL 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYN 239
              A R     A T D + L  L          +  I P  I+K      I +G+     
Sbjct: 172 AFTALRNGNVQAITQDDAKLVGLLGNVPAAQKADFEISPFSITKEYQGIGIPKGEDRLTA 231

Query: 240 IVSWTH 245
            V+ T 
Sbjct: 232 AVNQTL 237


>gi|227517775|ref|ZP_03947824.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis TX0104]
 gi|227074772|gb|EEI12735.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis TX0104]
          Length = 277

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G+
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGN 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVKKINTA 248


>gi|167570067|ref|ZP_02362941.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia oklahomensis C6786]
          Length = 264

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 16/247 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K     ++    +  T+ +    +L ++K+RG L+ G+      F      G+  GFDV
Sbjct: 7   KKLLVTGLIGASFVAATAHAA--DLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+++ +   P    ++          LQ+ + D++      T  R     L F P 
Sbjct: 65  DIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKR--RETLDFSPA 119

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             F     I  K       S+  L G  + V  GT                     +   
Sbjct: 120 YTFSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKTYPGA 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   L  L   +  P       ++ S +P      +G+ ++  
Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGSNVGSANPSGIPFKKGNPKFAK 232

Query: 240 IVSWTHY 246
            ++    
Sbjct: 233 AIAEAMT 239


>gi|317405100|gb|EFV85446.1| solute-binding protein [Achromobacter xylosoxidans C54]
          Length = 273

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 99/276 (35%), Gaps = 13/276 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M +   +     +          A  + DIK RG L CG       F+    A     G+
Sbjct: 1   MKRHSLIVACLGLAALSLGAGARADQVADIKARGELICGTLGTSQPFSFQDAATRQLVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+ ++  +      + Y  L+   R   L   ++DIL+ N       + +  +AF 
Sbjct: 61  DVDVCKLVADKLGVK---VSYKLLSVAARVPELNEGRVDILAANLG--YSPDRAEQIAFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   Q  ++ K  G+ ++  L+G  +    G+++E  +             I +   
Sbjct: 116 HAYYVSPQKLLVRKDSGLDTIESLNGRRVGATKGSSSEREIKRILDK----SQVIGYGDS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +  + DA       L  L L +   +   ++   +   P    + + +     
Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPGMLA 231

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
           +V+    A+  AE  G+  +  ++     T   ++R
Sbjct: 232 VVN---QALDEAESSGVAAQLFDKWFGAQTPYKLER 264


>gi|241662510|ref|YP_002980870.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|309781092|ref|ZP_07675830.1| ABC transporter [Ralstonia sp. 5_7_47FAA]
 gi|240864537|gb|ACS62198.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
 gi|308920158|gb|EFP65817.1| ABC transporter [Ralstonia sp. 5_7_47FAA]
          Length = 303

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 93/237 (39%), Gaps = 6/237 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74
            T  +++  +L  I+  G ++       V F+   A+    G+ +D C  +   +  D  
Sbjct: 24  GTVQASSTPVLDRIRDTGAVRVAYRESSVPFSFYDADKKPIGYAMDLCLRVVDKLRTDLK 83

Query: 75  --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K+QY+ +    R  A+   + D+   +T     RE    +AF    Y  G   ++ 
Sbjct: 84  RPDLKVQYVMVTPSTRMPAIIEGKADLECGSTTNN--RERREKVAFTIPHYIAGIRMLVK 141

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GI     L G ++    GTT+   L        +  + +  +   E  A     + D
Sbjct: 142 TSSGIRKWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVETGKAD 201

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           A+  D   LY  +     P ++ ++ D+++  P A  + + DTE+  +V      ++
Sbjct: 202 AFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLVDRAMTNII 258


>gi|167562880|ref|ZP_02355796.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia oklahomensis EO147]
          Length = 264

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 16/247 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K     ++    +  T+ +    +L ++K+RG L+ G+      F      G+  GFDV
Sbjct: 7   KKLLVTGLIGASFVAATAHAA--DLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+++ +   P    ++          LQ+ + D++      T  R     L F P 
Sbjct: 65  DIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKR--RETLDFSPA 119

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             F     I  K       S+  L G  + V  GT                     +   
Sbjct: 120 YTFSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKTYPGA 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   L  L   +  P       ++ S +P      +G+ ++  
Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGSNVGSANPSGIPFKKGNPKFAK 232

Query: 240 IVSWTHY 246
            ++    
Sbjct: 233 AIADAMT 239


>gi|312198103|ref|YP_004018164.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c]
 gi|311229439|gb|ADP82294.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c]
          Length = 311

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 11/231 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75
            T+F  +A  L  I++RG L  G       F       G  +GFD +  R LS  IF  P
Sbjct: 55  ATAFPASA-TLDRIRQRGELIVGTKFDQPLFGLQNPTTGKIEGFDTEIARLLSIRIFGSP 113

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++++   +K R   +Q  ++D++         R+    + F    Y  GQ  ++    
Sbjct: 114 DKVKFVETVSKNREPFIQQGKVDVVVATYTINDARKKL--VDFAGPYYTAGQDIMVKAGD 171

Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +  V+ L+G  +C   G+T+E  L    +A       ++ +            R DA 
Sbjct: 172 TTVHGVTDLNGKKVCTVEGSTSETNL----RAKAPGASVVLVDTYSSCAEQLLDGRVDAV 227

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           T D   L  L   +       ++    +  P    +I+GD  +   ++ T 
Sbjct: 228 TTDNVVLLGLVSQHKD--ALKLVGTAFTSEPYGIGLIKGDDGFRAFLNDTL 276


>gi|224966982|dbj|BAH28861.1| ABC transporter protein [Lactobacillus mucosae]
          Length = 285

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 108/276 (39%), Gaps = 22/276 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F ++   L        + N S +  IKKRG++K  +   L  +  V  +G   G+D+   
Sbjct: 20  FLLAFAPLAGTVTAHAADNQSSVSAIKKRGYIKIAVFGDLPPYGWVNKDGKRVGYDLYLA 79

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R ++  +       +++ +NA  R   L S + D++  N   T  R+    + F      
Sbjct: 80  RRIAKDLGVKA---KFVQVNANNRVDTLNSNKADLVLANFTVTSERK--QTVDFAKPYMK 134

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              G +  K   I+ VSQL G  + V  GTT E      F  H      + F+   +   
Sbjct: 135 VSVGVVSKKSDPITKVSQLKGQKLIVNKGTTAEQY----FTQHQTGASLLKFDSKTQQFN 190

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A +  R  A   D S LYA     + P   V +  +   S +APA+ +G+    N  +  
Sbjct: 191 ALKNGRAKALADDNSYLYAW--VKNNPKYTVGIKQLGKSSYIAPAVKKGNKSLLNWTNK- 247

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
                      IT+ N     +   N +++ + G +
Sbjct: 248 ----------EITKLNGENFFEKDYNQELKPYFGSE 273


>gi|161524794|ref|YP_001579806.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189350452|ref|YP_001946080.1| polar amino acid transporter substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160342223|gb|ABX15309.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189334474|dbj|BAG43544.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 271

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 89/231 (38%), Gaps = 11/231 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A  L DIKK G L+         F  V A      G DVD+ +AL+  +      +Q  
Sbjct: 23  QADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGLDVDYAKALADKLGVK---LQLQ 79

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P N   R   L S ++D++  N   T  R     + F    +  GQ F+  K   + S  
Sbjct: 80  PTNPANRIPFLTSGKVDLVLANFTITEERAK--QVDFSIPYFSSGQQFLAKKG-VLKSAD 136

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL+G  I    GTT E+TL + F         + ++      AA RA    A T D   L
Sbjct: 137 QLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDTPFAFAALRAGNVQAITQDGPKL 192

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             L         + I P  IS   +   + +G+T     V+ T   +  + 
Sbjct: 193 IGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLAFVNDTLKGLEASG 243


>gi|167035334|ref|YP_001670565.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166861822|gb|ABZ00230.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 305

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 8/237 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81
             L  IK  G +  G     + F+ +    +  G+  D   A+  A+        K++Y 
Sbjct: 28  GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVKYN 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138
            + ++ R   +Q+  +D+   +T   + R+  +G  F    +  G   +   K       
Sbjct: 88  LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G ++   AGTT+E  L        MK + I  +   E      + R  A+  D 
Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + L        +PS+ VI     S       + + D  +   V         + E+ 
Sbjct: 206 ALLAGEMAKARKPSDWVITGTPQSYEIYGCMVRKEDAAFKKAVDDAIVGYFKSGEVN 262


>gi|254555899|ref|YP_003062316.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum JDM1]
 gi|300767693|ref|ZP_07077603.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308179876|ref|YP_003924004.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|254044826|gb|ACT61619.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum JDM1]
 gi|300494678|gb|EFK29836.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308045367|gb|ADN97910.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 278

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 17/256 (6%)

Query: 1   MYK--DFFVSI--LCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K      ++  L ++++  T+           +L + K    +  G+      F  + 
Sbjct: 1   MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD 60

Query: 52  -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +   KGFD D   AL+  +    +  +++ + ++ R   L++  ID +      T  R
Sbjct: 61  VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAIIATMTITPER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           E    + F    +  GQ  ++ K   I SV  L       +    T     +  K    K
Sbjct: 121 EK--QVDFTNSYFDAGQSLLVKKGSAIKSVKDL--NKSGTKVLGVTGANSVENIKKAAPK 176

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +      +   A ++ +  A T D   LY +   N     + ++    +K P   A+
Sbjct: 177 AKVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPG---YEVVGGTFTKEPYGIAV 233

Query: 231 IQGDTEWYNIVSWTHY 246
            +G       ++    
Sbjct: 234 NKGQEPLKKALNKALK 249


>gi|160899853|ref|YP_001565435.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160365437|gb|ABX37050.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 297

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 91/258 (35%), Gaps = 7/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M    +   L  + L   S  + A +L  ++  G L        V F+ +   +G   G+
Sbjct: 1   MIFRQWGIALGALGLSALSCVSAAGVLDKVQAGGALVIAHRESSVPFSYIDTRSGKPVGY 60

Query: 60  DVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D C  L+ A+         K+++L +    R   ++  + D+   +T     R     
Sbjct: 61  ALDLCLRLAEAVRKQTGRKDMKVEFLMVTPANRMAVIEQGKADMECGSTTNNAQR--RQT 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF    +  G   ++     I+++  L G  +    GT+    +    +   M    + 
Sbjct: 119 VAFTVPHFITGARMLVKADSTINAMEDLKGKKLVSTKGTSPMALVTQANRQRLMGITIVE 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                           DA+  D   L  L      P    ++   +S  PLA  + + DT
Sbjct: 179 APDHARALEMVEKGEADAFVMDDVLLNGLAAARPDPRALKVVGKFLSTEPLAIMLPKADT 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
            +  +V      ++T+ E
Sbjct: 239 AFKKLVDEEMKRIITSRE 256


>gi|251778453|ref|ZP_04821373.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243082768|gb|EES48658.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 267

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 10/251 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   VS +  I +   +  +N         +  +  G++   V       +G+  GFDV
Sbjct: 6   KKLLIVSCVATIGVNLVACKSNKQ--ESASSKNEIIIGMDDTFVPMGFKDGSGETVGFDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+   +      +++  ++   +   L +  ID++      T  R+    + F  +
Sbjct: 64  DLAKAVGEKLNKK---VEFQSIDWSMKESELNNGNIDLIWNGYSITDERKE--NVEFSKV 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFERV 179
              + Q  I      I+S + L  A +  Q  ++    +       +     + + FE  
Sbjct: 119 YLNNRQVIITLVDSKINSKNDLINAKVGAQNQSSAVDAIKADGDMMSKFDGGNVVTFETN 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      A R DA   D   L           ++ IL D       A  I +GDT +  
Sbjct: 179 NDALMDLEAGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGAEDYAVGIKKGDTSFVQ 237

Query: 240 IVSWTHYAMVT 250
             +    +++ 
Sbjct: 238 EFNNALNSVIE 248


>gi|118443622|ref|YP_878647.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium novyi NT]
 gi|118134078|gb|ABK61122.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium novyi NT]
          Length = 270

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 90/261 (34%), Gaps = 29/261 (11%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEV 50
           M K    + ++ + I+  T   +  +   +         +K  G L  G++ G       
Sbjct: 1   MKKIMSILLVIIMGIVSLTGCGSKGASTTNSSSDSSLASVKNSGKLLVGLDDGYPPMEFR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  GFD+D  + +   +      ++++        L LQSK+ D +      T  R
Sbjct: 61  DEKNNLVGFDIDLAKEIGKKLGVK---VEFITTEFSGILLGLQSKKFDTIIAGFTMTDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT----TTELTLADYFK 165
           +    L F       GQ   + K    I  +S L    I  Q G+    T E  L D   
Sbjct: 118 KK--SLNFTEPYVLGGQIIAVKKGNNSIKKLSDLKEKVIGCQMGSAGQITAESKLKDI-- 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                     + ++ E  +     R DA   D  A       + +P +  +L +++SK P
Sbjct: 174 -----KELRKYGKITEAFSDMSIGRIDAVIMD--AQVGGYYISKKPGQFEVLDEMVSKEP 226

Query: 226 LAPAIIQGDTEWYNIVSWTHY 246
           +  A   GD    + V     
Sbjct: 227 MGIAFRMGDNALKDEVQKIIN 247


>gi|319784005|ref|YP_004143481.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169893|gb|ADV13431.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 260

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 91/253 (35%), Gaps = 13/253 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F        L+   FT+ S  A  L  IK  G LK  ++     F  V    +  G
Sbjct: 1   MNRVFSGIAVAALLLASTFTAVSARADDLEKIKAAGELKISMSGQYPPFNFVNDQNEVVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD D  +A++  I    + I             L + + D +  +   T  RE    + F
Sbjct: 61  FDADIGKAIAERIGVKGTIIT---TAWDGIIAGLLTNKYDTVVGSMTITPEREKV--VDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y  G+   + ++  + S+  L G +I V  G T E    +        +    ++ 
Sbjct: 116 VGPYYHAGRAVFVSEQSKVQSLDDLKGKTIGVTLGETHEKWARE-----KGGWDIRTYKG 170

Query: 179 VEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           + E+    RA R DA    +I  + A+K T ++  +            +  AI + + E 
Sbjct: 171 LPELLLELRAGRVDAIVVDNIPVMVAVKETGEKVRKLNTPDIEGGAVAIGIAIRKDNPEL 230

Query: 238 YNIVSWTHYAMVT 250
              +      M+ 
Sbjct: 231 KAAMQKALDDMLA 243


>gi|307289499|ref|ZP_07569445.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0109]
 gi|306499517|gb|EFM68888.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecalis TX0109]
          Length = 273

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K +++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNVATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|186473393|ref|YP_001860735.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184195725|gb|ACC73689.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 296

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 85/243 (34%), Gaps = 6/243 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIF 72
            T  ++ A  L  I +   +        + F+ +       GF VD   A+      A+ 
Sbjct: 17  GTMTASQAQTLDKIARTNQIVVSYRESAIPFSYLLTPHKAVGFSVDVTEAIVDDVRKALG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                  Y+P+  + R   L    ID+   +T  T  R   +   F    ++ G   +  
Sbjct: 77  RPDLHTVYVPVTGQNRIPLLIDGSIDLECGSTTNTSARGKEVA--FSTNYFYAGTRLMAK 134

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           ++  I   + L+  ++    G+T E  L     A ++    ++ +   +        +  
Sbjct: 135 RESHIGDYADLAHKAVATVGGSTNEKVLRRQLDAEHVDADVVLTKDYADALREVANGKAA 194

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A   D   LY L+     P+   ++   +   P A  + + D  +  +V  T   ++ + 
Sbjct: 195 ALALDDVLLYGLRANASDPTTWEVVGKTLQVEPYACMVRKDDPTFKRLVDGTFARLMKSS 254

Query: 253 ELG 255
           E  
Sbjct: 255 EFA 257


>gi|270290757|ref|ZP_06196981.1| glutamine transport system substrate-binding protein [Pediococcus
           acidilactici 7_4]
 gi|270280817|gb|EFA26651.1| glutamine transport system substrate-binding protein [Pediococcus
           acidilactici 7_4]
          Length = 277

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 93/266 (34%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK- 51
           M + F +  L L  + F           +         ++   L  G+      F  +  
Sbjct: 1   MRRRFKMLFLGLTAVLFLGILGGCTKQEAKQRDAWQTAQQTKTLTWGVKADTKLFGLMDV 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +   KGFD+D  +AL+  +    ++ +++ + ++ R   L++  +D +      T  R+
Sbjct: 61  KDSQIKGFDIDIAKALTKQMLGKDAQAEFVQVTSQTRIPLLKNGNLDAVIATMTITKDRQ 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169
               + F    +  GQ  ++ K   I SV  L   G  +    G  +   +  +      
Sbjct: 121 KV--VDFSDSYFDAGQSLLVPKDSKIHSVRDLNHPGTKVIGVVGANSVSNVKKFAPKA-- 176

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I  +   +   A ++ +  A T D   L+   +  D P +  ++    +K P   A
Sbjct: 177 --QVIQLQDYAQALTALKSGQGAALTTDNGILFG--MAVDNP-QFKVVGKAFTKEPYGIA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           I Q        ++     ++   E  
Sbjct: 232 INQNQPALKKHLNQALEEIIANGEYN 257


>gi|28210295|ref|NP_781239.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani
           E88]
 gi|28202731|gb|AAO35176.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani
           E88]
          Length = 272

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 93/260 (35%), Gaps = 26/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--------------SILGDIKKRGFLKCGINTGLVG 46
           M K   + ++ L+ +       N               S L  IKK G LK G+N     
Sbjct: 1   MKKTLSILVVFLVSMLLIIGCGNKNTSNKGNDKNNKSLSTLEKIKKDGVLKMGLNDTYPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                 + +  GFDVD  + ++  +      ++ +  +     L+L+SK+ D++      
Sbjct: 61  MEFRDESHNLVGFDVDLGKEIAKKLGVK---LEIITNDWSGIVLSLKSKKYDMILSTMSI 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFK 165
           T  R+  +   F       GQ  ++ K +  I  V  L G  I  Q GTT E++      
Sbjct: 118 TEERKKEM--NFSEPYIVGGQKLVVKKDEKDIKKVEDLKGKVIGCQMGTTGEVSANKIEG 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                     ++ V +        R +A   D     A      R  + V+L   ++  P
Sbjct: 176 IK----ELKKYDGVTQAFNDLSVGRINAVIAD--GQVAGYYLKKRSGDLVLLDTKLTSEP 229

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           +     + DT+  + V  T 
Sbjct: 230 VGIGFRKEDTDIRDEVQKTL 249


>gi|220926542|ref|YP_002501844.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219951149|gb|ACL61541.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 305

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 12/252 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
             F  IL + +    + +          L  IK    +  G+  G   F+ +  +  + G
Sbjct: 2   RIFGMILAMALAMPVAAAPTGAGELTGTLKKIKDSNRIVLGVRDGGPPFSYIDNDQKYVG 61

Query: 59  FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +D C  +  AI  + +    +++  P+ +  R   + +  ID+   +T     R+   
Sbjct: 62  YTIDICDKIIDAIKKEINAPTLQVEMNPVTSSTRIPLMTNGTIDLECGSTTNNPERQK-- 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F    +     F   K + I+ +  L G ++   AG+T  + +        +     
Sbjct: 120 QVTFTNAHFVTTSRFASKKAQNINKIDDLKGKTVVSVAGSTNLVQINKVNSERKLGLTIQ 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQG 233
             +   E        R  A+  D   L  L   +  P+ + I  D  +   P    + + 
Sbjct: 180 AAKDTVEAFLLLETDRAAAFVMDDVQLSILIALSKDPAAYTISEDAFALPEPYGIMLRRN 239

Query: 234 DTEWYNIVSWTH 245
           D  +  +V    
Sbjct: 240 DEPFKAVVDRAT 251


>gi|226310676|ref|YP_002770570.1| amino acid ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226093624|dbj|BAH42066.1| amino acid ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 258

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 87/248 (35%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  ++S+L   ++      ++A    D      L  GI+             +  GFD
Sbjct: 1   MKKIAWMSLLLGAVVSLVVGCSSAKTGAD---ANKLIIGIDDKFAPMGFRDEKNELVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+ RA    +     ++++  ++   +   L S +ID++      T  R+    + F  
Sbjct: 58  IDYARAAGEKMGK---QVEFQTIDWSAKESELNSGRIDLIWNGYTITDERKG--KVLFTK 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               + Q  +      ++ +S L+G +I +Q  ++    +      + ++     F    
Sbjct: 113 PYLKNAQVVVTKANSNLTKLSDLAGKAIGLQKLSSAADAINASEIKNQVQ-SITEFPDNV 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +  +  R +A   D   + A       P     L + +S       + +G+      
Sbjct: 172 LALSDLKIGRVEAVVID--QIVADYYMAKEPGAFKQLEESLSPEEYGIGVKKGNEALQKE 229

Query: 241 VSWTHYAM 248
           +     AM
Sbjct: 230 LQKALDAM 237


>gi|305432021|ref|ZP_07401188.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter coli JV20]
 gi|304445105|gb|EFM37751.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter coli JV20]
          Length = 259

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 8/228 (3%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75
           FTS +     L  IK +G L  G+   +  +A +  A G+ KGF+VD  + L+ +I  D 
Sbjct: 21  FTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILGDE 80

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K++ + +NAK R   L +  +D +      T  R+      F    Y D  G ++ K+K
Sbjct: 81  NKVKLIAVNAKTRGPLLDNGSVDAVIATFTITPERKRV--YNFSEPYYQDAVGLLVLKEK 138

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              S++ ++GA+I V    TT+  +    K   +K     F     I AA  A R DA++
Sbjct: 139 NYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDAFS 198

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D S L        +   + ILPD            + D  + N V+ 
Sbjct: 199 VDKSILLGY-----KDENNEILPDSFDPQSYGIVTKKDDANFSNYVND 241


>gi|268318929|ref|YP_003292585.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           FI9785]
 gi|262397304|emb|CAX66318.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           FI9785]
          Length = 249

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 84/246 (34%), Gaps = 6/246 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L  +         +    IK RG L  G++   V     + NG   GFDVD  +A    
Sbjct: 1   MLTSVGVAGCQGQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLAKAACKE 60

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           I   P    +  ++   +   L++  ID++      T  R     +AF      + Q  +
Sbjct: 61  IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSKPYLENDQILV 115

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAH 189
             K +GI++  Q+ G  + VQ G++    L +Y K    +    ++++         +A 
Sbjct: 116 TRKNEGINNYRQMRGKILGVQTGSSGADDLDNYPKVLKKRVKSTVLYDTYNNAFIDLKAG 175

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R D    D          +    E             +  I + D    N ++     + 
Sbjct: 176 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDETLKNKINQALDHLE 235

Query: 250 TAEELG 255
              EL 
Sbjct: 236 KTGELK 241


>gi|237650055|ref|ZP_04524307.1| amino acid ABC transporter periplasmic protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|237822716|ref|ZP_04598561.1| amino acid ABC transporter periplasmic protein [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|332075991|gb|EGI86457.1| putative amino-acid transporter periplasmic solute-binding protein
           [Streptococcus pneumoniae GA41301]
          Length = 288

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     ++    L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI+  N 
Sbjct: 61  KLFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDIILANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|94313505|ref|YP_586714.1| glutamate/aspartate ABC transporter periplasmic solute-binding
           protein [Cupriavidus metallidurans CH34]
 gi|93357357|gb|ABF11445.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind)
           high affinity periplasmic solute-binding protein
           [Cupriavidus metallidurans CH34]
          Length = 304

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 8/227 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKI 78
            + +L  I+  G +  G     + F+     G   G+ VD C  ++ A    +     K+
Sbjct: 33  QSPVLDRIRDSGTITLGYRESALPFSFGDDKGQPAGYAVDLCLRVAEAAKEKLGLKTIKV 92

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           ++LPL  + R  A+ +  +D+       TL R+  +   F    Y      ++    GI 
Sbjct: 93  RWLPLTPQNRVPAVVNGLVDLDCAPNTNTLERQKQVA--FSVSHYVSTVRMLVRADSGIK 150

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S   L G ++   AG+T +  +      +  +   +  +   E        R  A+  D 
Sbjct: 151 SFDDLRGKTVVTSAGSTGDRHVRRLKAEYGYRD--VYAKDHGESFLLLETGRAQAFVMDD 208

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L  L+  +  PS++VI+   +S    A  + + D EW  +V  T 
Sbjct: 209 VLLAGLRAKSKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTL 255


>gi|28210296|ref|NP_781240.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani
           E88]
 gi|28202732|gb|AAO35177.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani
           E88]
          Length = 271

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 24/261 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFAE 49
           M K   + +  L++       +              +L  IK    +K G+         
Sbjct: 1   MKKILALLLSTLVVGSIFVGCSKNDNKEKDDKKNVNVLQKIKDNKVIKVGLEDTYPPMEF 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                +  GFD+D C  +   +      ++Y+        ++L S +ID+ +     T  
Sbjct: 61  RNEKNELIGFDIDLCDEIGKRLGGK---VEYVMTEFGGLMMSLNSNKIDMSASAISITEE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R+      F       GQ  ++ K    I     L G  +  Q GTT E+          
Sbjct: 118 RKK--EAEFTKPYVDSGQALVVKKGNTSIKDEKDLKGKIVGAQLGTTGEIAAKKIEGVK- 174

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  +++V ++       R DA   D              SE   +   + + P+  
Sbjct: 175 ---EVKAYDKVPQVFQDLEIGRIDAVIVDEFVGRYYLSKQKDKSE---VIKSLEQEPIGI 228

Query: 229 AIIQGDTEWYNIVSWTHYAMV 249
           A  +G+ E    V      M+
Sbjct: 229 AFKKGEKELQEEVQKIIDEMI 249


>gi|227512774|ref|ZP_03942823.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus buchneri ATCC
           11577]
 gi|227522898|ref|ZP_03952947.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus hilgardii ATCC
           8290]
 gi|227083974|gb|EEI19286.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus buchneri ATCC
           11577]
 gi|227089927|gb|EEI25239.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus hilgardii ATCC
           8290]
          Length = 277

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 102/266 (38%), Gaps = 20/266 (7%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVK- 51
           M K       V  L ++++   + S+ +     +L D K+   +  G+      F  +  
Sbjct: 1   MRKILSRVGLVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDV 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +   KGF+VD  +A++  I     K +++ + ++ R   L +  ID +      T  R 
Sbjct: 61  KDNQIKGFEVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRA 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNM 169
               + F    +  GQ  ++     I +V  L+  GA +    G+ +   +  +      
Sbjct: 121 E--QVDFSRSYFDAGQAILVKDGSPIKNVRSLNRKGAVVLGVVGSNSVQNIKKFAPKA-- 176

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +      +   A ++ + DA T D   LY   ++ + P  + ++    +K P   A
Sbjct: 177 --RVLQLSDYSQALTALKSGQGDALTTDNGILYG--MSIENPG-YSVVGGTFTKEPYGIA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
             +G   ++N ++     +  + E  
Sbjct: 232 TAKGQRPFHNAINHALTKVENSGEYN 257


>gi|226361323|ref|YP_002779101.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226239808|dbj|BAH50156.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 324

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 10/222 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             +  I+ RG L  G++TG    +      G  +GFDVD  R +S  +F DP ++ Y  L
Sbjct: 79  PTVDAIRARGRLVVGLDTGSNLMSFRDPATGAIEGFDVDVAREISRDLFGDPDRLDYRIL 138

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            +  R  ALQ   +DI+++    T   +    +AF    +   Q  ++ K   I S + L
Sbjct: 139 TSANREKALQESMVDIVAKTMTITC--DRKERVAFSSEYFEAQQRVLVVKGSPIRSAADL 196

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  +CV  GTT+   L             +      +     +  + DA + D + L  
Sbjct: 197 DGKRVCVVRGTTSLTRLQQVAPTA----EILTVPMWSDCLVVLQQRQVDAVSTDDTILAG 252

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L   +       I+ D +   P    I + + +    V+ T 
Sbjct: 253 LASQDP---YLEIVGDSMGAEPYGVGITKANEDLVRFVNGTL 291


>gi|167836761|ref|ZP_02463644.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis MSMB43]
          Length = 264

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 87/252 (34%), Gaps = 19/252 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K   V+ L +   F  + +  A +L ++K+RG L+ G+      F      G+ 
Sbjct: 1   MKIASLKKLLVAGL-IGASFVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L
Sbjct: 60  VGFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDQRK--QTL 114

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F P   F     I  K      +S+  L G  + V  GT                    
Sbjct: 115 DFSPAYTFSSAQLIQRKDDTRQFTSLEDLKGKKLGVALGTNYMD-----MAKSVPGVDVK 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E      A R DA   D   L  L   +  P       ++ S +P      +G+
Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGN 227

Query: 235 TEWYNIVSWTHY 246
            ++   ++    
Sbjct: 228 PKFAKAIADAMT 239


>gi|239813837|ref|YP_002942747.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239800414|gb|ACS17481.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 300

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 7/238 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSK 77
                L  IK  G +  G+     G +    NG + GF  D C    + +   +     +
Sbjct: 21  QANDTLAKIKASGSITEGVRESS-GLSYTLGNGQYTGFHYDICANIIKDIQKHLGLAKLE 79

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
            +Y P+ ++ R   +Q+  +D+   +T     R+    ++F   TY +     +    GI
Sbjct: 80  TKYQPVTSQNRVPLVQNGTVDLECGSTTNNATRQK--DVSFAVTTYVEEVRIAVKANSGI 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S+  L+G ++    GTT+  TL    +A  + +  +  +   +      + R DA+  D
Sbjct: 138 NSIKDLNGKTVATTTGTTSVQTLRKNERAGGIDFKELYGKDHSDSFLLLESGRADAFVMD 197

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            S L +    +  P++  I+ +++S  P+A  I + D  +  +V  +  A +   +L 
Sbjct: 198 GSILASNIAKSKSPADFKIVGEVLSVEPIAIMIRKDDPAFKKVVDDSIKAQIKNGDLA 255


>gi|73542698|ref|YP_297218.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72120111|gb|AAZ62374.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 265

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 11/254 (4%)

Query: 1   MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   + ++  + L         +  A           +  G++          +N + 
Sbjct: 1   MKKFAALLLISTVALLGACGKKESAPAAGTEPAPVAATKIIVGLDDNFPPMGFRDSNNEL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +  S  +      +++ P++   +   L  K++D+L      T  R+    +
Sbjct: 61  VGFDIDMAKEASRRLG---LTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERK--QNI 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +F      + Q  I+     + + + LSG  +  Q G++    +    +          F
Sbjct: 116 SFTAPYMTNHQIVIVGTNSPVKTKADLSGRIVGAQDGSSAVDAIKKEAQVAGSLKELKTF 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                      A R DA   D   +    L + R  E+ +L +          + + D E
Sbjct: 176 GDNVTALMDLSAGRLDAIVVDE--VVGRYLISKRAGEYRVLDENFGTEDYGVGVRKDDAE 233

Query: 237 WYNIVSWTHYAMVT 250
               +  T ++M  
Sbjct: 234 LLGKLDKTLHSMKE 247


>gi|308071222|ref|YP_003872827.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Paenibacillus
           polymyxa E681]
 gi|305860501|gb|ADM72289.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Paenibacillus
           polymyxa E681]
          Length = 291

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 10/231 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            +S S   + + DIKK G ++ G+      F  V + G  +GFDV   +  +  +  D S
Sbjct: 32  GSSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDES 91

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K++++ ++A  R   L+S ++DI+  N   T  R+    + F         G +      
Sbjct: 92  KVEFVLVDAASRVAYLESNKVDIIMANFTVTDERKE--KVDFANPYMKLSFGIVSPDSAP 149

Query: 137 ISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           I+++ QL      + V  GTT E      F  +      + F++  EI +A +  R  A 
Sbjct: 150 ITTIDQLKNSDQKLIVAKGTTAETY----FTKNYPDIKLLKFDQYTEIFSALKDKRGAAI 205

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D + L A       P   V +P    +  +APA+ +G+ E  + ++   
Sbjct: 206 ANDNTELIAWA--KANPGFTVTIPAFGGQDTIAPAVAKGNKELLDWINNEL 254


>gi|304386276|ref|ZP_07368609.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pediococcus acidilactici DSM 20284]
 gi|304327633|gb|EFL94860.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pediococcus acidilactici DSM 20284]
          Length = 277

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 93/266 (34%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK- 51
           M + F +  L L  + F           +         ++   L  G+      F  +  
Sbjct: 1   MRRRFKMLFLGLTAVLFLGILGGCTKQEAKQRDAWQTAQQTKTLTWGVKADTKLFGLMDV 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +   KGFD+D  +AL+  +    ++ +++ + ++ R   L++  +D +      T  R+
Sbjct: 61  KDSQIKGFDIDIAKALTKQMLGKDARAEFVQVTSQTRIPLLKNGNLDAVIATMTITKDRQ 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169
               + F    +  GQ  ++ K   I SV  L   G  +    G  +   +  +      
Sbjct: 121 KV--VDFSDSYFDAGQSLLVPKDSKIHSVKDLNHPGTKVIGVVGANSVSNVKKFAPKA-- 176

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I  +   +   A ++ +  A T D   L+   +  D P +  ++    +K P   A
Sbjct: 177 --QVIQLQDYAQALTALKSGQGAALTTDNGILFG--MAVDNP-QFKVVGKAFTKEPYGIA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           I Q        ++     ++   E  
Sbjct: 232 INQNQPALKKHLNQALEEIIANGEYN 257


>gi|107028354|ref|YP_625449.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116686350|ref|YP_839597.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105897518|gb|ABF80476.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652065|gb|ABK12704.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 313

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75
           + +     L  ++  G +  G     + F+ + A     G+ ++ C+AL ++I    +  
Sbjct: 38  APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQS 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++P+ +  R  A+ S ++D+   +T   L R+  +   F PI +  G   ++ +  
Sbjct: 98  LTIRWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVA--FSPIFFVAGTKVMVKRGA 155

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L+G  + V AGTT E  L D      +     V     +  A       DA+ 
Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGSADAFA 215

Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   LY L      +  ++ ++ D +S  P      + D +   IV  T   +    E+
Sbjct: 216 TDDVLLYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQIVKSTFQELAADGEI 275

Query: 255 G 255
            
Sbjct: 276 A 276


>gi|253987650|ref|YP_003039006.1| periplasmic binding transport protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779100|emb|CAQ82260.1| putative periplasmic binding transport protein [Photorhabdus
           asymbiotica]
          Length = 287

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 94/248 (37%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     V+ L L  L   +    A  L DIKK G ++  +      F  +        G+
Sbjct: 10  MKSRVLVTAL-LAGLALVTGVAKADKLDDIKKAGTVRIAVFDSNPPFGFIDPQTKKLAGY 68

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+++ +      ++  P N   R   L SK+ID+++ N   T  R     + F 
Sbjct: 69  DVDIANAIANDLGVK---LELRPTNPANRLPLLASKKIDLIAANFTVTDERAK--QVDFS 123

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + S   +    I    GT  E+TL +++         I ++  
Sbjct: 124 IPYFATGQKFIARKG-VLKSPEDIKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          E  I P  I++   A A  +G+   
Sbjct: 179 PLAFAALRNGNVQAITQDDAKLVGLLANVPAAQKAEFEISPFSITREYQAVAAAKGEGRL 238

Query: 238 YNIVSWTH 245
             +V+ T 
Sbjct: 239 VEVVNQTL 246


>gi|319761717|ref|YP_004125654.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|317116278|gb|ADU98766.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
          Length = 286

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 17/279 (6%)

Query: 2   YKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57
               F ++    +   +   S S +A  L +IK +  L CG    +  F        +  
Sbjct: 4   KIRLFSTLAATAMGLGVAALSASAHADQLANIKAKKTLVCGTFAAIPPFGYPDPKTRETI 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D++ CRA++  +  +     +           L+   IDI+  N  +T  R     + 
Sbjct: 64  GSDIELCRAVAKEMGVNAEIRGF---PVGVHIPELKLGHIDIIIANMGYTKTRAE--QVE 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F        +  ++ K  GI ++S L G  I    G+T+E  +    K       P+ ++
Sbjct: 119 FSDAYNVGAEVAVVPKDSGIKTLSNLDGKKISATKGSTSETAIKLRLKEA----QPLTYQ 174

Query: 178 RVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                  A +  + DA+  +  SA      +   P   V+L + +   P+   + +G+T 
Sbjct: 175 DASSAFLALQQGKVDAFVINNVSAAAFANQSQKGPKPSVVLDEPLYVQPVVIGMTKGETA 234

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
               ++     +   E+ G   ++ N+   D ++  ++R
Sbjct: 235 LIREINTILRKL---EDSGYMDQHWNKWFGDGSDYKLKR 270


>gi|120609704|ref|YP_969382.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120588168|gb|ABM31608.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 267

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 77/251 (30%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K   ++++ L  L       +++                +  G++             
Sbjct: 1   MKKIAAIALVSLGALLAACGKNDSAQPAASTPATPAAAVTKIVIGLDDNFPPMGFRDDKN 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D  R  +  +  +   +++ P++   +   L  +++D L      T  R+   
Sbjct: 61  QLVGFDIDMAREAAKRMGVE---VEFKPIDWSAKEAELSGRRVDALWNGLTITEERK--Q 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF      + Q  ++     + + + L+G  +  Q G++    +              
Sbjct: 116 NIAFTAPYMENHQIIVVAANSPVKTKADLAGKIVGAQEGSSAVDAVKKEEAVFKSFKEFK 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F             R +A   D   +        +P ++ +L +          + + D
Sbjct: 176 TFGDNVTALMDLSTGRLEAVVVDE--VVGRYYVAKKPQDYAVLDEHFGTEEYGVGVRKDD 233

Query: 235 TEWYNIVSWTH 245
           T     +    
Sbjct: 234 TALQGRLDKAL 244


>gi|167562821|ref|ZP_02355737.1| extracellular solute-binding protein, family 3 [Burkholderia
           oklahomensis EO147]
 gi|167570001|ref|ZP_02362875.1| extracellular solute-binding protein, family 3 [Burkholderia
           oklahomensis C6786]
          Length = 271

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 103/325 (31%), Gaps = 63/325 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L    L     + +A  L DIKK G L+         F  V        G 
Sbjct: 1   MKLKPLATWLIGFSLVAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAQALADKLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QLSG  I    GTT E+TL D +         + ++  
Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLSGLRIGADKGTTNEVTLRDKYPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + I    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLVA 230

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
            V  T                                             GL  D     
Sbjct: 231 FVDDTLK-------------------------------------------GLEAD----- 242

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324
               G  G ++D   G  ++  + R
Sbjct: 243 ----GRAGRIYDAWFGPSTKTPLTR 263


>gi|319761572|ref|YP_004125509.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|330823440|ref|YP_004386743.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|317116133|gb|ADU98621.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|329308812|gb|AEB83227.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 265

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 79/249 (31%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDW 56
           M K   V++L L  +         +              +  G++             + 
Sbjct: 1   MKKIAAVALLSLGAVLAGCSKQENAPAPAAAPAPAAVTQIVVGLDDNFPPMGFRDEKNEL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +  +  +     ++++ P++   +   L  K++D+L      T  R+    +
Sbjct: 61  VGFDIDMAKEAAKRLG---LQVEFKPIDWSAKEAELSGKRVDVLWNGLTITEERK--QNI 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF      + Q  ++     I + + L+G  +  Q G++    +               F
Sbjct: 116 AFTAPYMENHQIIVVPAGSAIKAKADLAGKVVGAQEGSSAVDAIKKEDAVFKSFKEFKTF 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                        R +A   D   +        +P ++ +L D          + + DTE
Sbjct: 176 GDNVTALMDLSTGRLEAVVVDE--VVGRYYVAKKPDQYEVLDDNFGTEEYGVGLRKDDTE 233

Query: 237 WYNIVSWTH 245
            +  +    
Sbjct: 234 LHGKLDKAL 242


>gi|320334508|ref|YP_004171219.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM
           21211]
 gi|319755797|gb|ADV67554.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           maricopensis DSM 21211]
          Length = 278

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 9/222 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPLN 84
             I + G    G+      F  V  +GD  GFDVD  + ++  +        K++   + 
Sbjct: 22  DQICQDGKFTAGVKYDSPPFGFVNEDGDVGGFDVDLVKEIAKDLSAACKKTVKLELKQVT 81

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           +K R   +Q+  +D+ +     T  R     + F    + DGQ  ++     I SV  L+
Sbjct: 82  SKNRIEFVQNGTVDLAAATATATYGR--MDVVDFSNTYFIDGQRLLVPANSAIKSVKDLA 139

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +    G+T+E  L    KA   K   + F++  +   A +  R DA + D + L  L
Sbjct: 140 GKRVGTAQGSTSEANL----KAAAPKASVVSFQQYTDAFTALQQGRVDAVSTDSTILLGL 195

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           K +   PS+  I+    S  P    + Q D++W N V+ +  
Sbjct: 196 KASAPDPSKFKIVGAYFSNEPYGIILKQNDSKWRNFVNESLT 237


>gi|148997221|ref|ZP_01824875.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP11-BS70]
 gi|168575367|ref|ZP_02721303.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           MLV-016]
 gi|307067313|ref|YP_003876279.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|147756921|gb|EDK63961.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP11-BS70]
 gi|183578414|gb|EDT98942.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           MLV-016]
 gi|306408850|gb|ADM84277.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
          Length = 288

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K     ++    L F +               +  A  + +IKK G L+  +    
Sbjct: 1   MKLFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI+  N 
Sbjct: 61  KLFGYVDNDGSYQGYDIELGNQLAQNLGVK---VKYISVDAANRAEYLISNKVDIILANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|257083724|ref|ZP_05578085.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
 gi|256991754|gb|EEU79056.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
          Length = 273

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFK---LYSISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|291302012|ref|YP_003513290.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
 gi|290571232|gb|ADD44197.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
          Length = 323

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 12/228 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77
           S S ++  +  I   G LK G++            +G+ KGFDV   R ++  +  D  K
Sbjct: 72  SGSKSSDDIKRIVDAGVLKVGVDQTTNLMGYRDPASGNMKGFDVAIAREIAKELLGDEDK 131

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           IQ++ +N+K R  AL+ +++D++ R       R   +G  F    Y   Q  ++      
Sbjct: 132 IQFVTMNSKGRIPALKERKVDLVVRTMTMNCDRWKDIG--FSAEYYTAHQRVLVPS-SAS 188

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             +  L G  +C    +T+   + D  KA      P+      +     +     A + D
Sbjct: 189 DDIDDLKGEKVCAAEDSTSLNRIRDDLKAK-----PVSAREWTDCMILLQQGDVAAMSTD 243

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + L  +   +       ++   +S  P      + D      V+ T 
Sbjct: 244 DTILAGMAAQDPN---TKVIGKDLSDEPYGIGANKEDVGLIKFVNKTL 288


>gi|257125932|ref|YP_003164046.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
 gi|257049871|gb|ACV39055.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
          Length = 262

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 20/265 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   + IL L +   +              I K   +  G++   V        G+  
Sbjct: 1   MKKMLLLMILALSVFMCSVQKEEKKEEKNADGIPK--KIVVGLDDSFVPMGFKNEKGEIV 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  RA++  +  +   +++ P+N   + L L    ID++      T  R+    + 
Sbjct: 59  GFDIDLARAVAQKLGAE---VEFKPINWDSKILDLNGGNIDLIWNGLTITEERKKETEM- 114

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +   Q  ++     I++ + L+G +I  Q  ++ E  +         K     + 
Sbjct: 115 -TKPYFTSHQLIVVKAGSSINAKADLAGKNIGSQTESSGEEAVKKSGDDKKFK-EFKTYA 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGD 234
           + ++      A R DA   D       K T +   +   + IL D   +     A  +G+
Sbjct: 173 QYDQAFMDLDAGRVDAIIADEVLAKYTKKTKETQAKKELYKILNDNYGEEEYGIAAKKGN 232

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
            +    ++         EEL     
Sbjct: 233 IKLVEAINKAI------EELKADGT 251


>gi|221195872|ref|ZP_03568925.1| amino acid transport protein [Atopobium rimae ATCC 49626]
 gi|221184346|gb|EEE16740.1| amino acid transport protein [Atopobium rimae ATCC 49626]
          Length = 296

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/288 (20%), Positives = 104/288 (36%), Gaps = 29/288 (10%)

Query: 2   YKDFFVSILCLIILFFTSF-------------STNASI---LGDIKKRGFLKCGINTGLV 45
            + F         +  ++              +  +     + DIKK G +  G  +   
Sbjct: 10  RRAFLAGAASFSTMLLSACDHGGGQTATGGGSAGASDTFRSVDDIKKAGTVNIGYFSDKA 69

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F  V  +G   G+DV F   L+  +  +     Y+  +   R   LQS + DI+  N  
Sbjct: 70  PFGYVDKDGKPAGYDVVFGNRLAKDLGVEA---NYISTDGLNRVPFLQSNKADIMLANFT 126

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T  R     + F         G +  +   I SV +L G  + V  GTT E      F+
Sbjct: 127 VTDERAE--KVDFSLPYMKIKLGIVSPESAVIKSVDELKGKKLIVSKGTTAETY----FE 180

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
            +  +   + F+   +   A    R DA++ D + + A       P   V + D+ +   
Sbjct: 181 KNYPEVTMVKFDSYADAYNALLDGRGDAFSTDNTEVLAW--VKSNPGFVVGVDDLGNADT 238

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           +A A+ +G+T     ++      + AEE     K+  +  K     DV
Sbjct: 239 IAAAVHKGNTSLLEFINNEITGPL-AEE-NFFHKDYEETLKPVFGDDV 284


>gi|154148477|ref|YP_001406034.1| antigenic protein [Campylobacter hominis ATCC BAA-381]
 gi|153804486|gb|ABS51493.1| antigenic protein [Campylobacter hominis ATCC BAA-381]
          Length = 266

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 6/232 (2%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S     S L +IK+   +K G+   L  F+    +G+++GF++   +A+ ++I   
Sbjct: 1   MLICSCFAFGSTLEEIKQSKVIKIGVRLNLPPFSNQNEHGEFEGFEISLAKAIGASILGK 60

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +IQ + LNAK+R   LQ+  +D++  N   T  R     + F      + QG +  K 
Sbjct: 61  NGEIQLVGLNAKDRIPYLQNGTVDLILANFSKTEERAK--SVDFATPYLSNTQGILTKKS 118

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           + I S+SQL+G  I    GTTT+  L        +   P+  + V +   + +    D Y
Sbjct: 119 ENIRSISQLAGKKILFIKGTTTDDYLKANAAKLGI--TPVECQSVNKCFQSLQKGEADGY 176

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +  L+L +D     + + +I S   + P + +G+      V+ + Y
Sbjct: 177 MHTSILIAFLQLLDDN--IEMGIQNIGSIEFICPGVKKGNEALLEAVNASIY 226


>gi|34556716|ref|NP_906531.1| binding component of ABC transporter [Wolinella succinogenes DSM
           1740]
 gi|34482430|emb|CAE09431.1| BINDING COMPONENT OF ABC TRANSPORTER [Wolinella succinogenes]
          Length = 267

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 92/247 (37%), Gaps = 15/247 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   ++ +  L     S    S L +I KRG L+ G+  G + F      G+  GF
Sbjct: 1   MKKIWLGILISVCTLLGADMSLWQKSTLNEIIKRGELRVGLEPGYLPFEMKDKKGNVIGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  R ++ A+      ++ +P +       L +++ DI+      +  R  +L + F 
Sbjct: 61  DVDLAREMAKAMGVK---LKLVPTSWDGLIPGLVTEKFDIIISGMTISQER--NLRVNFV 115

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIV 175
                 GQ  ++ K     + S   L    + +      + E      FK          
Sbjct: 116 EPYIVVGQSLLVKKGLEKGVKSYKDLDKPELTLVTKFGVSAEYAAKRLFK----NAKLKT 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++   E        + D +  D+    A      +    V L   ++  PL  AI +GD 
Sbjct: 172 YDTEAEAVQEVLNGKADMFIFDLPFNVAFMAQKGQGY-LVHLDTSLTYEPLGWAIKKGDP 230

Query: 236 EWYNIVS 242
           ++ N ++
Sbjct: 231 DFLNWLN 237


>gi|109947011|ref|YP_664239.1| polar amino acid transport system substrate-binding protein
           [Helicobacter acinonychis str. Sheeba]
 gi|109714232|emb|CAJ99240.1| polar amino acid transport system substrate-binding protein
           [Helicobacter acinonychis str. Sheeba]
          Length = 277

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 17/263 (6%)

Query: 1   MY-KDFFVS---ILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M     F +    L LI L F + S +       L  IK+RG LK G+ +    F  V +
Sbjct: 1   MKTNKLFKAWGLFLILIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G ++G+DV   + +   +  D +KI+++P+ A  R   L++ ++D++  N   T  RE 
Sbjct: 61  KGKYQGYDVVIAKRIVLDLLGDENKIEFIPVEASARVEFLKANKVDVIMANFTCTKEREA 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F         G I  K   I ++ +L    + V  GTT +      F  +     
Sbjct: 121 V--VDFAKPYMKVALGVIS-KDGAIKNIEELKDKELIVNKGTTADFY----FTKNYPHIK 173

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + FE+  E   A    +  A   D + L A       P   + + ++  K  +APAI +
Sbjct: 174 LLKFEQNTETFLALLKDKAIALAHDNTLLLAWAKQ--HPEFKLGITNLGDKDVIAPAIKK 231

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
           G+ +    ++    +++++  L 
Sbjct: 232 GNPKLLEWLNNEIDSLISSGFLK 254


>gi|326693635|ref|ZP_08230640.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 284

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 83/257 (32%), Gaps = 18/257 (7%)

Query: 5   FFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            FV ++    +  +S +          T       IKK   +  G++   V        G
Sbjct: 17  LFVGVVIWAAMSLSSGAKRTAQNEQQTTQTEDWARIKKAKQITIGLDDTFVPMGFRDKEG 76

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFDVD   A+   +     K+++ P++   +   L +  ID +      T  RE  +
Sbjct: 77  NIVGFDVDLATAVFKTMG---IKVKWQPIDWSMKETELNTGNIDAIWNGYTVTKAREKQV 133

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY 171
              F    +   Q  +  KK  I+  S +    +  Q  ++ +     Y    K +    
Sbjct: 134 A--FSKPYHKATQVLVTLKKNNINRFSDMKDKVLGDQTASSGDEGFNKYPKVLKQYVKDQ 191

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + ++  ++      A R D    D             P ++ +         +A    
Sbjct: 192 QVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQPNPKDYTVTVGDFPIDQMAVGFR 251

Query: 232 QGDTEWYNIVSWTHYAM 248
           + D +    V  T  A 
Sbjct: 252 KSDNQLREAVDQTLAAF 268


>gi|146307037|ref|YP_001187502.1| cystine transporter subunit [Pseudomonas mendocina ymp]
 gi|145575238|gb|ABP84770.1| L-cystine-binding protein / Diaminopimelate-binding protein
           [Pseudomonas mendocina ymp]
          Length = 265

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 86/246 (34%), Gaps = 13/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +    S+  ++   F+  S  A +L DIK RG +K G+      F    A+G   GF+V
Sbjct: 8   RRVLLGSLTLVLSSAFSLPSLAADLLDDIKARGAIKIGLEGTYPPFNYQDASGKLTGFEV 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   AL+  +        + P        AL+SK++D++      +  R       F   
Sbjct: 68  ELAEALAKELGVKAE---FQPTKWDGILAALESKRLDVVINQVTISDERRK--KYDFSTP 122

Query: 122 TYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               G   +  K     I S   L+G  + V  GT  E  L D    +  +     ++  
Sbjct: 123 YTVSGIQALTRKADGDSIKSAQDLAGKKVGVGLGTNYEQWLKD----NVPQADIRTYDDD 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R D    D   L A ++ +       +  D  S+     A+ +G+ +   
Sbjct: 179 PTKFQDLNVGRIDVILVDR--LAAFEMVDKTGGRLAVAGDAFSRQEAGIALRKGNPQLLA 236

Query: 240 IVSWTH 245
            +    
Sbjct: 237 AIDEAL 242


>gi|116513636|ref|YP_812542.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092951|gb|ABJ58104.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 270

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 95/246 (38%), Gaps = 11/246 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64
              +L  ++    S S ++S    +K+   +  G+      F+ +   +G   GF+VD  
Sbjct: 1   MAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDLA 60

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA++  I     K++   ++ K R + L+   +D +      T  R     + F    + 
Sbjct: 61  RAITKQILGPKGKMKIGYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYFM 118

Query: 125 DGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G+  I+ KK  ++S+   + +        G+T +  +  Y          I ++     
Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA----RVIFYDDYGSC 174

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A +A + +A   D + L  L   +       +LPD  +  P    I +G+ ++   V+
Sbjct: 175 YNALKAGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEVN 232

Query: 243 WTHYAM 248
                +
Sbjct: 233 QALKVL 238


>gi|291279627|ref|YP_003496462.1| polar amino acid ABC transporter substrate-binding protein
           [Deferribacter desulfuricans SSM1]
 gi|290754329|dbj|BAI80706.1| polar amino acid ABC transporter, substrate-binding protein
           [Deferribacter desulfuricans SSM1]
          Length = 266

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 14/247 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     ++    +  TSF+T  S L  + K+G LK G++T  V +A    NG+  G
Sbjct: 1   MKFLKKLLFLMIIFAFVAQTSFATE-STLDKVLKKGVLKVGMST-FVPWAMYDKNGNLIG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  + L+  +      I+++P        AL + + DI+      T  R + +  + 
Sbjct: 59  FEIDVAKRLAKDMGVK---IEFVPTKWSGIIPALLTGKFDIIIGGMSITPQRALKVNFSI 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                         K KG + +S  +  +  I V+ GTT E+    +F          +F
Sbjct: 116 PYDYSGMSIVANKFKAKGWNKLSDFNKKNVIIAVRIGTTAEVASKRFFP----NAKIKLF 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R  A            + +     ++ + D  +K P+  A+ +GD +
Sbjct: 172 DDESQAIQELLLGRAHAVVASAPMPAFQAIEHPD-RLYLPIKDTFTKEPIGFAVRKGDYD 230

Query: 237 WYNIVSW 243
           + N ++ 
Sbjct: 231 FLNFLNS 237


>gi|120401719|ref|YP_951548.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119954537|gb|ABM11542.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 332

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
               + +IK RG L  G++ G   F+      G+  GFDVD    ++  IF  PS+++Y 
Sbjct: 85  ADKAVANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTPSQVEYR 144

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            L++ +R  ALQ  Q+D++ +    T  R+    + F        Q  +  +   I   S
Sbjct: 145 ILSSADRVEALQKNQVDVVVKTMTITCERKKL--VNFSTAYLSANQRILAPRDSNIRQSS 202

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            LSG  +CV  GTT+   +             +      +   A +  + DA + D S L
Sbjct: 203 DLSGKRVCVAKGTTSLERIQQITP----PPIIVGVVTWADCLVALQQRQVDAVSTDDSIL 258

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             L      P  H++ P  +++ P    +   +T     V+ T  
Sbjct: 259 AGLVSQ--DPYLHIVGPS-MNEEPYGIGVNLENTGLVRFVNGTLQ 300


>gi|260904718|ref|ZP_05913040.1| extracellular solute-binding protein family 3 [Brevibacterium
           linens BL2]
          Length = 299

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 101/303 (33%), Gaps = 45/303 (14%)

Query: 1   MYK-DFFVSILCLIILFFTSFST-----------------------------NASILGDI 30
           M K    ++ + + +L  +                                 ++      
Sbjct: 1   MKKLRLSIASVAIGLLALSGCGQGGTPDAPAEGDGAQAEAPEYTVNDSADFKDSKTWKAA 60

Query: 31  KKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           K  G LK G+     G   VKA +   +GFD++  + +++ +   P +I+Y    +  R 
Sbjct: 61  KDAGELKVGVKYDQPGLGNVKAGSEQPEGFDIEIAKMVAAQLGFSPDQIKYTETVSANRE 120

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             LQ   ID++         R+    + F    Y  GQ  ++ +   I+    L G  +C
Sbjct: 121 PFLQQGNIDMVVATYTINDERKKV--VDFAGPYYVAGQDLLVAEDSDIAGPDDLDGKKVC 178

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
              G+T    + + +         + ++   +     ++   DA T D + L       +
Sbjct: 179 SVDGSTPAQNIEEKYDKA----ELVAYDTYSKCVTDLQSGSVDAVTTDDAILRGYAKQYE 234

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNINQ 263
              E  ++    ++ P    + +GD    + V+              A E  +   +  +
Sbjct: 235 --GEFKVVGKPFTEEPYGVGLPKGDDAMRDAVNDALQKGMDDGDWKKAFEYTLGSADDVE 292

Query: 264 VSK 266
           + +
Sbjct: 293 MPE 295


>gi|111020803|ref|YP_703775.1| glutamine ABC transporter substrate-binding protein [Rhodococcus
           jostii RHA1]
 gi|110820333|gb|ABG95617.1| probable ABC glutamine transporter, substrate binding component
           [Rhodococcus jostii RHA1]
          Length = 341

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 10/221 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  I  RG L  G++     F+      G  +GFDVD  + ++  IF DP+++++  L 
Sbjct: 96  SLAAIAARGRLIVGVDQNTNLFSFRDPTTGTLQGFDVDLAKEVARDIFGDPTRVEFRLLT 155

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           +  RF AL++ ++D++   T  T  R   +G  F    +   Q  ++ +   I+  + L+
Sbjct: 156 SAGRFSALENNEVDVVVHATSITCERARRVG--FSTEYFRAFQRILVPQGSDITGPADLA 213

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +C    TT+  T+             +     ++     +  + DA +   S L  L
Sbjct: 214 GKRVCTFVDTTSLATVQRVAP----DATILAVPDWDDCLVTMQKKQADAVSTSDSLLAGL 269

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       I+   +        + +G  +    V+ T 
Sbjct: 270 ASQDRN---FRIVGPQLEAEHWGIGVNKGRDDLVRFVNGTL 307


>gi|187924805|ref|YP_001896447.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187715999|gb|ACD17223.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 324

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 84/257 (32%), Gaps = 11/257 (4%)

Query: 7   VSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  L        + S         L  I   G +  G+    + F+     G   G+   
Sbjct: 32  LVALTTFGAASLACSAQTDELTGTLRKIHDDGVVVLGVREASIPFSYFDGKGT-VGYSQT 90

Query: 63  FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
                   +   +     K+  + + +  R   L + QID+   +T  T+ RE     AF
Sbjct: 91  IALQIVEEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERE--NLAAF 148

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +      I  K  GI+    L+G ++   AGT+ E  L        +         
Sbjct: 149 SNSFFQYAVRMIARKNAGITDFQDLAGKAVVTTAGTSDERLLRRLNTDKLLNMRITSARD 208

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E     +  R  A+  D   +Y  K T+ RP + V+    +     A    +GD  + 
Sbjct: 209 HSEAFNTLKDGRAVAFVMDEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPFR 268

Query: 239 NIVSWTHYAMVTAEELG 255
            +V+       T+ E  
Sbjct: 269 TLVNGVIARGQTSGEAE 285


>gi|269796952|ref|YP_003316407.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542]
 gi|269099137|gb|ACZ23573.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542]
          Length = 290

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 91/256 (35%), Gaps = 10/256 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S +  + + G +  G       F  V  +G   GFDV+  + ++  +   P  I++  
Sbjct: 43  EGSTMARLAEAGTMTVGTKFDQPLFGLVGPDGTPVGFDVEIAKIIAGELGIAPDDIEWTE 102

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141
             +  R   +Q  ++DI+          +    + F    Y  GQ  +++     I S  
Sbjct: 103 TVSANRETFIQEDRVDIVVATYTIND--DRKQVIDFAGPYYLAGQSLMVNADDDSIQSED 160

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  +C   G+T    + + F           F +  +     R  + D  T D   L
Sbjct: 161 DLAGKIVCSAEGSTPAKNIEENFP----DADLRTFSQYTDCLDPLRNGQVDVLTTDNVIL 216

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKN 260
                  + P +  +  +  ++ P    + + DT++ N ++ T  A           +  
Sbjct: 217 AGYVA--ESPDDFKLAGEQFTEEPYGIGLKKDDTDFRNFINDTLEAAYEDGRWDAAWEAT 274

Query: 261 INQVSKDTTNPDVQRF 276
             +V    T P V R+
Sbjct: 275 AGEVLDTPTPPAVDRY 290


>gi|229588679|ref|YP_002870798.1| glutamate/aspartate ABC transporter periplasmic binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229360545|emb|CAY47402.1| glutamate/aspartate ABC transport system, periplasmic binding
           protein precursor [Pseudomonas fluorescens SBW25]
          Length = 308

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 11/245 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  I   G +        + F+ +   +G   G+  D   A+   +  D    
Sbjct: 23  AAELTGTLKKINDSGTITLAHRDSSIPFSYIADGSGKPVGYSHDIQLAVVEQLKKDLNKP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K +Y  + ++ R   +Q+   D+   +T     R  +  + F    +  G   ++ K 
Sbjct: 83  DLKAKYNLVTSQTRIPLIQNGTADLECGSTTNNAER--AQQVDFTVNIFEIGTRLLVKKD 140

Query: 135 ----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                  +  + L G ++   AGTT+E  +        M  + I  +   E      + R
Sbjct: 141 KDGKPSYADFADLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGR 200

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             A+  D + L   +    +P + VI     S    A  + + D  +   V     A+  
Sbjct: 201 AVAFMMDDALLAGEEAKAKKPDDWVITGTPQSFEAYACMVRKDDPAFKKAVDDAIVALYK 260

Query: 251 AEELG 255
           + E+ 
Sbjct: 261 SGEIN 265


>gi|296111778|ref|YP_003622160.1| amino acid ABC transporter, amino acid-binding protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295833310|gb|ADG41191.1| amino acid ABC transporter, amino acid-binding protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 284

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 89/267 (33%), Gaps = 27/267 (10%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTNASI---------------LGDIKKRGFLKCGIN 41
           M K       + ++ + I+ + + S N+                    IK+   +  G++
Sbjct: 4   MKKKIIVNSIIGLIVVGIVSWLAISLNSGTKNTAQNTQKATKTDDWQRIKRDKQITIGLD 63

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
              V       NG   GFDVD   A+  ++      +++ P++   +   L +  ID + 
Sbjct: 64  DTFVPMGFRDKNGKIIGFDVDLANAVFKSMG---ITVKWQPIDWSMKETELNTGNIDAIW 120

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  R     ++F    +   Q  +  KK  I+  S + G  +  Q  ++ + T  
Sbjct: 121 NGYTKTAARAK--QVSFSKTYHRATQVLVTLKKNNINQFSDMQGKVLGDQTASSGDETFN 178

Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           ++    K +      I ++  ++      A R D    D             P  + +  
Sbjct: 179 EHPKVLKQYVKDQKVIGYDTFDKAFTDLNAGRIDGLLIDEDYARYYVAHQANPKNYTVTV 238

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +    A    + D +    V+ T 
Sbjct: 239 GDFAVDQTAVGFRKSDVKLRQAVNKTL 265


>gi|126667081|ref|ZP_01738056.1| putative ABC transporter periplasmic amino acid-binding protein
           [Marinobacter sp. ELB17]
 gi|126628487|gb|EAZ99109.1| putative ABC transporter periplasmic amino acid-binding protein
           [Marinobacter sp. ELB17]
          Length = 273

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 7/250 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    S++ L  + FTS +  A  L  + +RG L CG+            N    GFD
Sbjct: 1   MMRKLATSLV-LSCIAFTSVNATADQLDTVIQRGTLNCGVVLDFPPMGYFDGNNQPAGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V +C  L++A+  + + +    L   +R  +L S + D++  +T  TL R  S+G  F  
Sbjct: 60  VGYCNDLAAALGVESNILN---LTWGDRIPSLISGKTDVVIGSTSDTLERAKSVG--FTY 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             +      I  K K I S   L    +    GTT E     Y +       +   F+  
Sbjct: 115 PYFVFKFQVIAPKNKNIQSFDDLKNLKVGAALGTTYETEYLAYAEKKGWGTDNYTAFKSE 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        + DA     + +     + +                +     + +  W +
Sbjct: 175 NDAYLGLYQGKVDAVISTNTNIATKLQSAEFKDFAAGPFVPNYDDVVGLIAKRSEGAWIS 234

Query: 240 IVSWTHYAMV 249
            ++      +
Sbjct: 235 YLNLFLVHQI 244


>gi|289435074|ref|YP_003464946.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289171318|emb|CBH27860.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 271

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 87/252 (34%), Gaps = 11/252 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   V+I+ +I L   +  ++         I+K   +  G++   V       + +  
Sbjct: 1   MKKVLVVAIMAIISLTLVACGSDETKEDQWKRIEKNKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+    +A
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKK--KVA 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174
           F      + Q  +  K   I   S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSNPYMKNEQVLVTLKSSNIKEFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIANNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +         R D    D               ++ I+    + +  A  + + D
Sbjct: 176 LYDTFDVAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFNPTDFAVGMRKSD 235

Query: 235 TEWYNIVSWTHY 246
            +    V+    
Sbjct: 236 KKLQTKVNDAFK 247


>gi|254421935|ref|ZP_05035653.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
 gi|196189424|gb|EDX84388.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
          Length = 288

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 17/259 (6%)

Query: 1   MYKDFFVSILCLIIL-----FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +     +  ++ +      F S +  A+ L +I++RG+L   +         + +   
Sbjct: 1   MRRKLLAGVGSILGVQFLLPLFVSLNAFAAELSEIRERGYLVVAVKDNRPPMGFLNSADQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D  R L+  +  D   ++ +P    +R  A+   ++D+       T  R     
Sbjct: 61  LSGFEIDIARKLAEDLLGDADAVELVPTRNVDRLDAVIENRVDVAIAALTITEPRRRI-- 118

Query: 116 LAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
           ++F    Y DG  FI          I ++  L   +I V   ++T   L+    A     
Sbjct: 119 VSFSYPYYLDGTAFITRLPTDSAPDILTLHDLQLGTIAVLERSSTVAQLSYLLPAAQQ-- 176

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +      E      +   DA+ GD S L    +       H +LPDIIS  PLA  + 
Sbjct: 177 --VGVGSYLEAQTLVESGAVDAFAGDASVLAGWTMEGGALMNHSMLPDIISAEPLAVVLP 234

Query: 232 QGD--TEWYNIVSWTHYAM 248
           +G   +     V+      
Sbjct: 235 KGQQYSPLQTAVNKAIQRW 253


>gi|300718324|ref|YP_003743127.1| extracellular solute-binding protein [Erwinia billingiae Eb661]
 gi|299064160|emb|CAX61280.1| extracellular solute-binding protein [Erwinia billingiae Eb661]
          Length = 279

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 90/250 (36%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M        +  + L     S  A  L DI+ RG L C + + +  F+          G 
Sbjct: 1   MKLKLLSCSVLALPLMMAFSSAKADALSDIQARGQLNCAVYSDVPPFSSPDPKTRQLVGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C AL+  +     K+  +P + + R   + + + D+L  N  +T  R   +   F 
Sbjct: 61  DVDLCTALAQQMG---LKLNLMPTSIEARIAVIATGRADVLIANLAYTKTRGKQIQ--FS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  ++ K     + +   G  I    GTT+E ++      H      + F+  
Sbjct: 116 DPYYVAKEMLVVKKPDVDKTKADFKGKRISATKGTTSEQSI------HLAGAKAVTFQDA 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A   ++   +  +      +         E  ++ + ++  P+   + QG+    
Sbjct: 170 ASAFLALEQNKAVGFVTNTMTGIKMITQAGKDGIELGMIKEPMALEPIGIGMKQGEPALL 229

Query: 239 NIVSWTHYAM 248
             V+ +  AM
Sbjct: 230 TKVNTSLKAM 239


>gi|170748630|ref|YP_001754890.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655152|gb|ACB24207.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 267

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 107/323 (33%), Gaps = 66/323 (20%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDV 61
           +  F   L +++   ++    A  L  I++ G L+         F  V        G DV
Sbjct: 2   RRLFAFALAIVL---SAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLDV 58

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           ++ +A++ A+      ++  P N   R   L S ++D++  N   T  R     L F   
Sbjct: 59  EYAQAIADALGVK---LEVRPTNPANRIPLLTSGKVDLVLANFTITDERAK--QLDFSIP 113

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  GQ F+  K   +SS  QL+G  I    GTT E+ L   F         + F+    
Sbjct: 114 YFASGQQFLAKKG-TLSSPEQLNGLRIGADKGTTNEIVLRRDFPRA----IVVAFDDTPF 168

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R     A T D   L  L         + I    IS   +   I +G+T   ++V
Sbjct: 169 AFTALRNGNVQAITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLV 228

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
           + T                                 G++ S                   
Sbjct: 229 NETLR-------------------------------GLEASGRAAA-------------- 243

Query: 302 HMGNYGEMFDRNLGNQSELKIPR 324
                  ++DR  G ++E  +PR
Sbjct: 244 -------IYDRWFGPETEQPLPR 259


>gi|84489759|ref|YP_447991.1| polar amino acid ABC transporter periplasmic substrate-binding
           protein [Methanosphaera stadtmanae DSM 3091]
 gi|84373078|gb|ABC57348.1| predicted ABC-type polar amino acid transport system, periplasmic
           substrate-binding protein [Methanosphaera stadtmanae DSM
           3091]
          Length = 282

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 88/257 (34%), Gaps = 18/257 (7%)

Query: 1   MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K           ++I+  +++F    +TN +   +      L  G ++    +     
Sbjct: 1   MNKKIGIIAGVIVLIAIIAAVLVFTGVINTNGNTGPN---DNVLVVGFDSEFPPYGYKDD 57

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG++ GFD+D  + + +    +   +   P++   +   L S  ID +          + 
Sbjct: 58  NGEYVGFDLDLAQEVCNR---NNWTLVKQPIDWDAKDSELSSGTIDCIWNGFTINGREDK 114

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKY 171
                +      + Q  +     GI+S+S L G  +  Q  ++    L  D     +   
Sbjct: 115 ---YLWSKPYIDNKQVIVTKSNSGINSLSDLKGKQVETQKDSSALSALEGDQKPLADTFK 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +             A  CDA   DI        +   PS++ IL + IS         
Sbjct: 172 QLVQIADYNTAFLDLDAGTCDAVAMDIGVAQYQVNSKSNPSDYKILDEEISSEQYGIGFK 231

Query: 232 QGDTEWYNIVSWTHYAM 248
           +G+ +  + +  T   M
Sbjct: 232 KGNEQLRDKIQQTLDEM 248


>gi|154244135|ref|YP_001415093.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154158220|gb|ABS65436.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 267

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 84/254 (33%), Gaps = 11/254 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F V    L +    +    A  L +IKKR  +   ++ G   F     N    G DV
Sbjct: 8   RRAFLVGATGLAVAGSLALPAFADTLEEIKKRNKILIAVDLGSPPFGMTDGNMQPTGSDV 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +  ++ +      ++ + + +  R   L + + D++  +   T  R+    + F   
Sbjct: 68  ESAKLFAAELG---VPLEIVQVTSPNRIPFLLTGKADMVMASFSVTDERKKV--IDFSDP 122

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                      K   I  +  L G  +    G++ +                + F+    
Sbjct: 123 YGVIQIVVAGPKNVAIRDIKDLVGKRLGTTRGSSNDKEATTQA----QGAEMVRFDDDAT 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  A  + + +        + A+          V L  ++  +P A  + +GD    + V
Sbjct: 179 LITALVSGQVNLMASSPQVMQAVNARRPNDPLEVKL--VLKTNPYAVGLRKGDDALRDAV 236

Query: 242 SWTHYAMVTAEELG 255
           +    A +   +L 
Sbjct: 237 NKVIAANLKNGKLN 250


>gi|158321614|ref|YP_001514121.1| extracellular solute-binding protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158141813|gb|ABW20125.1| extracellular solute-binding protein family 3 [Alkaliphilus
           oremlandii OhILAs]
          Length = 284

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 91/253 (35%), Gaps = 12/253 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K  F+ +L  I+L+ ++  +++      L +I++RG++  G++            G+  
Sbjct: 21  KKYVFLILLMGIMLWTSACGSSSKAVSVDLKEIEERGYVVMGLDDTFAPMGFRNNAGELV 80

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  + + S +     ++++  +    +   L S  ID++      +  R+    + 
Sbjct: 81  GFDIDLAKEVFSRV---DIEVRFQQIEWSMKETELNSGNIDLIWNGYSISDERKE--KVD 135

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIV 175
           F      + Q  +      I +   L G  + VQ G+T    +  Y            ++
Sbjct: 136 FTKPYLENKQIIVTLADTKIEARDDLKGKKVAVQNGSTAYDAVMAYPDLVEEFSGGELVL 195

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   E      A R +A   D   L    L      +  +  +          + +   
Sbjct: 196 FDTNNEAFMDLEAGRTEAVVADE-VLARYYLKGRGEEKFKVAEEDFGDEEYGIGVRKTSK 254

Query: 236 EWYNIVSWTHYAM 248
           E   +V  T   M
Sbjct: 255 ELLELVENTLDEM 267


>gi|257892422|ref|ZP_05672075.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,408]
 gi|294614008|ref|ZP_06693938.1| glutamine-binding protein [Enterococcus faecium E1636]
 gi|257828801|gb|EEV55408.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,408]
 gi|291593115|gb|EFF24694.1| glutamine-binding protein [Enterococcus faecium E1636]
          Length = 244

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 11/226 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            N  IL   K    +  G+      F  +   +   +GFDVD  +A++  I  D  K ++
Sbjct: 2   ANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTVQGFDVDIAKAITKKILGDNGKTEF 61

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +K R   L++  ID +      T  R+    + F  + +  GQ  ++ K   I SV
Sbjct: 62  VEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QVDFSDVYFDAGQALLVKKGSQIKSV 119

Query: 141 SQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             L+ ++      G+T+   +  +          +  E   E   A ++ + DA T D +
Sbjct: 120 DDLNASTTVLAVKGSTSAANIRQHAP----DAKILELENYAEAFTALQSGQGDAMTTDNA 175

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L  +   ++ P E+ ++    +  P   AI +G   +   V+   
Sbjct: 176 ILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQENFLKAVNQAL 218


>gi|170734967|ref|YP_001774081.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169821005|gb|ACA95586.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 313

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75
           + +     L  ++  G +  G     + F+ + A     G+ ++ C+AL ++I    +  
Sbjct: 38  APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQS 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++P+ +  R  A+ S ++D+   +T   L R+  +   F PI +  G   ++ +  
Sbjct: 98  LTIRWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVA--FSPIFFVAGTKVMVKRGA 155

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L+G  + V AGTT E  L D      +     V     +  A       DA+ 
Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGGADAFA 215

Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   LY L      +  ++ ++ D +S  P      + D +   +V  T   +    E+
Sbjct: 216 TDDVLLYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEI 275

Query: 255 G 255
            
Sbjct: 276 A 276


>gi|310827295|ref|YP_003959652.1| hypothetical protein ELI_1703 [Eubacterium limosum KIST612]
 gi|308739029|gb|ADO36689.1| hypothetical protein ELI_1703 [Eubacterium limosum KIST612]
          Length = 279

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 90/254 (35%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K F V  L  +++F  + +  +           D    G L   ++   +        
Sbjct: 1   MKKKFLVLSLAFMLVFSVTLAGCSGNGKGDSASNDDPIADGTLSVAVDDTYLPMEFRDDQ 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFDVD  +A+   +      + +  +     F  L +KQ D +  +T  T  R   
Sbjct: 61  NNLVGFDVDLAKAIGEDLGVK---VDFTTVAWDGIFNGLNAKQYDAIISSTSITPER--Q 115

Query: 114 LGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            G         +G   +  K    + +  +L+G ++ VQ  TT +       +       
Sbjct: 116 EGFNQTNPYVSNGIVIVSRKDATPVKTFEELAGKTVGVQLDTTADNGAQKLKEQTGTNVE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++ + +  AA    + +    D     A+     +P    +  ++++  P+A  + +
Sbjct: 176 IKQYDGMLDAFAALEGKQINNVMTD--VGVAMYYVAQKPELFEVTSEVLTNEPIAVTVRK 233

Query: 233 GDTEWYNIVSWTHY 246
           G+  +   ++ T  
Sbjct: 234 GEDAFTEKLNETLK 247


>gi|254777189|ref|ZP_05218705.1| extracellular solute-binding protein, family protein 3
           [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 326

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 10/237 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68
           L   +  F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++
Sbjct: 66  LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 125

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             IF  PS ++Y  L++ ER  ALQ  ++D++ +    T   +    + F  +     Q 
Sbjct: 126 RDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITC--DRRKQVNFSTVYLDANQR 183

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  +   I+ VS LSG  +CV  GTT+   +       +     +      +   A + 
Sbjct: 184 ILAPRDSPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQ 239

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              DA + D S L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 240 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTGLVRFVNGTL 293


>gi|226359784|ref|YP_002777562.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226238269|dbj|BAH48617.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 340

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 89/220 (40%), Gaps = 9/220 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           L +I  RG L  G++     F+      G  +GFD+D  + ++  IF DP+K+++  L +
Sbjct: 95  LAEIASRGRLIVGVDQNTNPFSFRDPTTGTLQGFDIDVAKEITKDIFGDPAKVEFRLLTS 154

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             RF AL+   +D++   T  T  R   +G  F    +   Q  ++ +   I+  + L+G
Sbjct: 155 AGRFSALEQNDVDVVVHATAITCERARRVG--FSTEYFRAFQRILVPRGSDITGPADLAG 212

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             +C    TT+  T+             +     ++     +  + DA +   + L  L 
Sbjct: 213 KRVCTFVDTTSLPTVQRVAPEA----TIVAVPDWDDCLVTMQKRQADATSTSDALLAGLV 268

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                P   ++ P +  +     A+ +   +    V+ T 
Sbjct: 269 SQ--DPHFQIVGPPMEGEEHWGLAVNKYKDDLIRFVNGTL 306


>gi|224437618|ref|ZP_03658571.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Helicobacter cinaedi CCUG 18818]
 gi|313144069|ref|ZP_07806262.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129100|gb|EFR46717.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 258

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 11/247 (4%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-W 56
           M    K         ++L   +   NA +L DIKKRG +  G+   +  FA +       
Sbjct: 1   MKLGFKGMLKIAGLFLVLGIFALQANAGMLEDIKKRGEIVVGVKNDVPCFALLDQKTKEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GF+VD  + L+ +I  D  KI+ + +NAK R   L +  ID +      T  R+ +   
Sbjct: 61  QGFEVDVAKLLAKSILGDEKKIKLVAVNAKTRGPLLDNGSIDAVIATFTITPERKRT--Y 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y D  G ++ K+KG  S++ +   +I V    T++  +    K   +      F
Sbjct: 119 NFSQAYYKDAVGLLVLKEKGYKSIADMKNTTIGVAQAATSKKAIDAAAKKLGVNVKFNEF 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                I AA  A R DA+  D S L              ILPD            + D E
Sbjct: 179 PDYPSIKAALDAKRVDAFGVDKSILLGYVDDKS-----EILPDSFEPQEYGIVSPKKDKE 233

Query: 237 WYNIVSW 243
           +   +  
Sbjct: 234 FATFIDK 240


>gi|118465451|ref|YP_883877.1| extracellular solute-binding protein, family protein 3
           [Mycobacterium avium 104]
 gi|118166738|gb|ABK67635.1| Bacterial extracellular solute-binding protein, family protein 3
           [Mycobacterium avium 104]
          Length = 334

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 10/237 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68
           L   +  F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++
Sbjct: 74  LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 133

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             IF  PS ++Y  L++ ER  ALQ  ++D++ +    T   +    + F  +     Q 
Sbjct: 134 RDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITC--DRRKQVNFSTVYLDANQR 191

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  +   I+ VS LSG  +CV  GTT+   +       +     +      +   A + 
Sbjct: 192 ILAPRDSPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQ 247

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              DA + D S L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 248 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTGLVRFVNGTL 301


>gi|41409992|ref|NP_962828.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398825|gb|AAS06444.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 309

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 10/237 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68
           L   +  F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++
Sbjct: 49  LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 108

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             IF  PS ++Y  L++ ER  ALQ  ++D++ +    T   +    + F  +     Q 
Sbjct: 109 RDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITC--DRRKQVNFSTVYLDANQR 166

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  +   I+ VS LSG  +CV  GTT+   +       +     +      +   A + 
Sbjct: 167 ILAPRDSPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQ 222

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              DA + D S L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 223 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTGLVRFVNGTL 276


>gi|327534390|gb|AEA93224.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecalis OG1RF]
          Length = 277

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K + +++L  C  +L F       +N      I +   +  G++   V       +G 
Sbjct: 2   MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +A+          + + P++   +   LQ++ ID++      T  R     
Sbjct: 62  IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           + F      + Q  +  K+K I++ S + G  + VQ G++         D  K       
Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASAMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   E     ++ R D    D           D    + I          A  + +
Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236

Query: 233 GDTEWYNIVSWT 244
            D +    ++  
Sbjct: 237 SDNQLVQKINTA 248


>gi|239816574|ref|YP_002945484.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239803151|gb|ACS20218.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 304

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 92/243 (37%), Gaps = 6/243 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74
             + +     L  IK  G +  G      GF+ +  N    G+ ++ C  +  A+  +  
Sbjct: 26  VAAQAQENDTLSKIKASGAITFGYRESSFGFSYLDGNLKPVGYSIEICNRIVEAVKSELK 85

Query: 75  --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +I+Y  + +  R   +Q+  +DI   +T   + R+  +   F P  +      ++ 
Sbjct: 86  LPAIEIKYQAVTSANRIPLVQNGTVDIECGSTTNLVERQKQVA--FSPDIFRYNVRMLVK 143

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GI S++ L G ++    GTT+   L +  K  N++ + +  +   +      + R  
Sbjct: 144 ADSGIRSIADLQGKTVATTTGTTSFRLLREADKGRNLEVNNLGGKDHSDSFLLVESGRAQ 203

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D   L         P + +I  + +     +    + D  +  +V      M+ + 
Sbjct: 204 AFVLDDILLAGQIANARNPKDFIITGESLRTENQSLMFRKDDPAFKALVDRVVSGMMKSG 263

Query: 253 ELG 255
           E+ 
Sbjct: 264 EME 266


>gi|17549361|ref|NP_522701.1| substrate-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17431614|emb|CAD18291.1| probable substrate-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 298

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 89/240 (37%), Gaps = 6/240 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75
              ++  L  IK  G ++       V F+ + ANG   G+ +D C  L  AI D+     
Sbjct: 22  AVASSPTLDHIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRPD 81

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+QYL +    R  A+ S + D+   +T     RE    +AF    Y      ++    
Sbjct: 82  LKVQYLQVTPATRMDAIMSGKADLECAST--NNARERREKVAFTIPHYIANGRMLVKTAS 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI  +  L G ++    G+     +    +A  +    +      E  A     +  A+ 
Sbjct: 140 GIHQLEDLRGKTVVSTRGSANGNLVRQLSEAGGLGITVVEAGDHGESFAMLAEGKAQAFA 199

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D   L  +K     P+++ I+       P A  + + D E+  ++      ++   E  
Sbjct: 200 MDDVLLAGMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMSRLMEDGEAE 259


>gi|28377714|ref|NP_784606.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum WCFS1]
 gi|28270547|emb|CAD63451.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           plantarum WCFS1]
          Length = 278

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 17/256 (6%)

Query: 1   MYK--DFFVSI--LCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K      ++  L ++++  T+           +L + K    +  G+      F  + 
Sbjct: 1   MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD 60

Query: 52  -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +   KGFD D   AL+  +    +  +++ + ++ R   L++  ID +      T  R
Sbjct: 61  VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           E    + F    +  GQ  ++ K   I SV  L       +    T     +  K    K
Sbjct: 121 EK--QVDFTNSYFDAGQSLLVKKGSAIKSVKDL--NKSGTKVLGVTGANSVENIKKAAPK 176

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +      +   A ++ +  A T D   LY +   N     + ++    +K P   A+
Sbjct: 177 AKVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPG---YEVVGGTFTKEPYGIAV 233

Query: 231 IQGDTEWYNIVSWTHY 246
            +G       ++    
Sbjct: 234 NKGQEPLKKALNKALK 249


>gi|313890250|ref|ZP_07823884.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121355|gb|EFR44460.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026]
          Length = 272

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 20/257 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
            K   +S+L    L   +  +         N+S +  IKK G L+ G+   +  F     
Sbjct: 5   RKWILLSLLAFFCLSQLTLPSVKATENKWVNSSAIKKIKKSGILRIGVKQDVPNFGYYSP 64

Query: 53  N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           N G ++G +VD  + ++ ++   P    +  + A+ R   L + Q+DI+      T   E
Sbjct: 65  NSGQYEGMEVDIAKKIAKSLKVKP---VFTAVTAQTREALLDNGQLDIIIATYTITP--E 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +F    Y D  GF+++  + I+S+  L+ A+I V  G+TT+  + +Y +   + +
Sbjct: 120 RQANYSFSKPYYRDEIGFLVNTSQKIASIKDLNHATIGVAQGSTTKAAIEEYARNKKLTF 179

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +      E+  +  A R  A++ D S L        +     IL D  ++     A  
Sbjct: 180 KFVQLGSYPELAISLYAKRIKAFSVDKSILTGYVSKQSQ-----ILSDGFNQQSYGIASS 234

Query: 232 QGDTEWYNIVSWTHYAM 248
           + +    N ++      
Sbjct: 235 KANQNLTNYINELITKW 251


>gi|218507985|ref|ZP_03505863.1| polar amino acid ABC transport substrate-binding protein, aapJ-2
           [Rhizobium etli Brasil 5]
          Length = 189

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 1/171 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK+RG +K G+     GF    + G W+GF VDF RAL+  +F+D  K+++  
Sbjct: 20  AGQTLDKIKERGVIKVGV-GTTPGFFTPDSTGRWQGFFVDFGRALAVTVFNDDDKVEFTN 78

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            + ++R  ALQ+ + DIL      T+ R   LG  F P+ ++DGQG ++ K  G++   +
Sbjct: 79  SSPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDLGVAKGEE 138

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           L GA+I VQ+GTT EL +AD+F+    K+ PI  E   E   A    R DA
Sbjct: 139 LDGATIGVQSGTTGELNIADFFRKTGKKFTPITIEETSEFTKALDTGRVDA 189


>gi|322376867|ref|ZP_08051360.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
 gi|321282674|gb|EFX59681.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
          Length = 279

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 91/250 (36%), Gaps = 13/250 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           K   + ++ L+ LF T+ +  AS          +++G +  G +   V     + NG + 
Sbjct: 4   KKIALVLVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +     K+Q+ P++   +   LQ+  ID +      T  R     +A
Sbjct: 64  GFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K + I SV  +   ++  QAG++  L      D  K         
Sbjct: 119 FSIPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++   E     +  R DA   D         +    +++ +          A  +   D
Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPAD 238

Query: 235 TEWYNIVSWT 244
                 ++  
Sbjct: 239 KRLLQALNQA 248


>gi|159184745|ref|NP_354406.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140033|gb|AAK87191.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 267

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 88/252 (34%), Gaps = 9/252 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               + + +    FT FS NA  + DI KRG +K G+  G   F  V A G+  G+D D 
Sbjct: 8   KSVAAAIAVCAGIFTGFSANAQSVDDIVKRGSVKIGVLVGAPPFGSVDAQGNPVGYDADV 67

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              +   +      +  + L    R  AL+S ++D L      T  R     + F     
Sbjct: 68  ATLIGKYLG---VPVTMVQLTPPSRIPALESGKVDFLVATLAPTPERAK--AVMFTNPYS 122

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
               G   HK   I     L G ++ V  G++ E    +  K        + F+      
Sbjct: 123 AFQVGIYSHKDTKIEKWEDLKGMTVGVNRGSSVEREFVNREKELG--LTILRFDDDATTM 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A  + +  A  G  +   A      R      +    S  P +  + +   + +  ++ 
Sbjct: 181 QALFSGQVQAIAGPDAQ--ANAAIKLRGDTTTEVKFFFSIQPNSMTVRKDAVDLHQWLNN 238

Query: 244 THYAMVTAEELG 255
           T Y +    EL 
Sbjct: 239 TIYYIKQNGELD 250


>gi|172037710|ref|YP_001804211.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142]
 gi|171699164|gb|ACB52145.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC
           51142]
          Length = 300

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F +  L L+++  + S S    IL  IK+ G +  G     + FA V   G+W G+
Sbjct: 2   MKKKFVLLALTLLLMATSQSPSWAGEILEKIKQTGVITAGTRKDAIPFAYVNEEGEWVGY 61

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +   I      P +++ + +  + RF  +++++IDI   ++ +T  R+    +
Sbjct: 62  SIDVLEIIRQDIEKKLGKPIQLKLVEVTPQNRFDKVKNREIDIECASSTFTWERDEV--V 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G      K   + ++  L+G  I V   TT E  +     A       +  
Sbjct: 120 DFSVSYFASGTKIFRKKGSDLGTIDSLAGRRIGVIPNTTNEQAIKLQQPAA----ILVPI 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E          +A  GD   L  L+L N    +  ++P+        A  I + ++
Sbjct: 176 KDRTEGLEKLNNGEIEAIAGDGIVLQGLRLENGNADKFEVVPEFPYMYEAYACMIPEDES 235

Query: 236 EWYNIVSWTHYAMVTA 251
            W  +V+++    +  
Sbjct: 236 AWRGMVNYSLVKFMEG 251


>gi|163789690|ref|ZP_02184127.1| glutamine ABC transporter (glutamine-binding protein)
           [Carnobacterium sp. AT7]
 gi|159874912|gb|EDP68979.1| glutamine ABC transporter (glutamine-binding protein)
           [Carnobacterium sp. AT7]
          Length = 266

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 96/235 (40%), Gaps = 14/235 (5%)

Query: 17  FTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
               S +A+ +     I++   +  G+      F      +G+ +GFD+D  +A++  I 
Sbjct: 21  AACGSQSAATVDITERIEENPTITWGVKVDTNLFGLYDIKSGEIRGFDIDIAKAITEEIT 80

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            D +  +++ + +K R   L++  ID +      T  R+    + F  I +  GQ  ++ 
Sbjct: 81  GDEANAEFVEVTSKTRIPLLKNGNIDAIIATMTITEERKE--QVNFSDIYFDAGQALLVP 138

Query: 133 KKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
               I S+  LS   ++    G+T+   +    +  +   + +  E   E   A ++ + 
Sbjct: 139 NDSSIQSLEDLSADTTVLAVKGSTSAQNI----RELSPDTNVLELENYSEAFTALQSGQG 194

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           DA T D + L  +    D P  + +     ++ P   AI +G  ++   V+    
Sbjct: 195 DAVTTDNAILLGIIA--DNPG-YRLAGGNFTQEPYGIAINKGQDDFLTEVNEALT 246


>gi|315442241|ref|YP_004075120.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|315260544|gb|ADT97285.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 323

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 10/231 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F +     + + +IK RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 70  FATQEEADAAVANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTP 129

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S+++Y  L++ +R  AL+  Q+D++ +    T  R+    + F        Q  +  +  
Sbjct: 130 SQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKL--VNFSTAYLIANQRILAPRDS 187

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I   S LSG  +CV  GTT+   +             +      +   A +  + DA +
Sbjct: 188 NIRQSSDLSGKRVCVAKGTTSLERIQQISP----PPLIVGVVTWADCLVALQQRQVDAVS 243

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            D + L  L      P  H++ P  +++ P    +   +T     V+ T  
Sbjct: 244 TDDAILAGLVSQ--DPYLHIVGPS-MNEEPYGIGVNLQNTGLVRYVNGTLQ 291


>gi|145220806|ref|YP_001131484.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK]
 gi|145213292|gb|ABP42696.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 324

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 10/231 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F +     + + +IK RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 71  FATQEEADAAVANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTP 130

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S+++Y  L++ +R  AL+  Q+D++ +    T  R+    + F        Q  +  +  
Sbjct: 131 SQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKL--VNFSTAYLIANQRILAPRDS 188

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I   S LSG  +CV  GTT+   +             +      +   A +  + DA +
Sbjct: 189 NIRQSSDLSGKRVCVAKGTTSLERIQQISP----PPLIVGVVTWADCLVALQQRQVDAVS 244

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            D + L  L      P  H++ P  +++ P    +   +T     V+ T  
Sbjct: 245 TDDAILAGLVSQ--DPYLHIVGPS-MNEEPYGIGVNLQNTGLVRYVNGTLQ 292


>gi|332163540|ref|YP_004300117.1| putative periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667770|gb|ADZ44414.1| putative periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 269

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 62/318 (19%), Positives = 103/318 (32%), Gaps = 65/318 (20%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69
            L  L   S + +A  L DIKK G ++  +      F  +        G+DVD   A++ 
Sbjct: 1   MLASLATLSGAAHADKLDDIKKEGVVRIAVFDSNPPFGYIDPHTKKLVGYDVDVANAIAK 60

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +      ++    N   R   L SK++D+++ N   T  R     + F    +  GQ F
Sbjct: 61  DLGVK---VELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKF 115

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           I HK   + +   +    I    GT  E+TL D +         I ++       A R  
Sbjct: 116 IAHKG-VLKTPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNG 170

Query: 190 RCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
              A T D + L  L          +  I P  I+K      I +G+      V+ T   
Sbjct: 171 NVQAITQDDAKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNET--- 227

Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307
                                        + ++K     +                    
Sbjct: 228 ----------------------------LVKLEKDGEAAK-------------------- 239

Query: 308 EMFDRNLGNQSELKIPRG 325
            ++DR  G +++   PRG
Sbjct: 240 -IYDRWFGPETKAAQPRG 256


>gi|207724820|ref|YP_002255217.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           MolK2]
 gi|206590045|emb|CAQ37006.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           MolK2]
          Length = 280

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 90/243 (37%), Gaps = 6/243 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74
             +   ++  L  IK  G ++       V F+ + A G   G+ +D C  L  AI ++  
Sbjct: 1   MMNAVASSPTLDRIKATGAIRLAHRESSVPFSYLDAGGKPIGYSMDLCMRLVDAIRENLK 60

Query: 75  --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K+QYL +    R  A+ + + D+   +T     RE    +AF    Y      ++ 
Sbjct: 61  RPDLKVQYLQVTPATRMDAIMNGKADLECAST--NNARERREKVAFTIPHYIANGRMLVK 118

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GI  +  L G ++    G+     +    +A  +    +      +  A     +  
Sbjct: 119 TASGIQKLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHAQSFAMLADGKAQ 178

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D   L  +K T   P+++ I+       P A  + + D E+  ++      ++   
Sbjct: 179 AFAMDDVLLAGMKATAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMSRLMEDG 238

Query: 253 ELG 255
           E  
Sbjct: 239 EAE 241


>gi|124027566|ref|YP_001012886.1| glutamine-binding periplasmic protein precursor [Hyperthermus
           butylicus DSM 5456]
 gi|123978260|gb|ABM80541.1| glutamine-binding periplasmic protein precursor [Hyperthermus
           butylicus DSM 5456]
          Length = 269

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 8/221 (3%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  L  G +     F  +  NG   GFD++  R ++     D   I+   ++      AL
Sbjct: 36  KKILVVGTSPDFPPFEYIAKNGSVVGFDIELIRLVAKKAGYD--DIEIRTMDFDALIPAL 93

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICV 150
           +  QID+++     T  R+    + F    +   Q  ++         SV +LSG ++ V
Sbjct: 94  EQGQIDVIAAGMTITEERK--QRVDFTIPYWQVDQAILVRADSEFRPKSVEELSGKTVGV 151

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GTT    L    +   +  +   +           A R DA   D       +     
Sbjct: 152 QTGTTAADYLNKIVEEKGLNINIKEYSSYVLAVNDLIAGRIDAVMVDTPVAKMFEKQYKD 211

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                 + +         A+ +G+TE  + ++     ++ +
Sbjct: 212 KLVISAVIETG--EKYGFAVRKGNTELLDKLNKALEDIMNS 250


>gi|238854965|ref|ZP_04645295.1| glutamine-binding protein [Lactobacillus jensenii 269-3]
 gi|260664250|ref|ZP_05865103.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           jensenii SJ-7A-US]
 gi|282931676|ref|ZP_06337169.1| glutamine-binding protein [Lactobacillus jensenii 208-1]
 gi|313472445|ref|ZP_07812937.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lactobacillus jensenii 1153]
 gi|238832755|gb|EEQ25062.1| glutamine-binding protein [Lactobacillus jensenii 269-3]
 gi|239530142|gb|EEQ69143.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lactobacillus jensenii 1153]
 gi|260562136|gb|EEX28105.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           jensenii SJ-7A-US]
 gi|281304287|gb|EFA96396.1| glutamine-binding protein [Lactobacillus jensenii 208-1]
          Length = 275

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 94/254 (37%), Gaps = 18/254 (7%)

Query: 1   MY---KDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M    +  F S   L++L  ++    S ++     IK    +  G+      F  +    
Sbjct: 1   MKNFYRWIFASFSLLVLLTLSACQNKSKSSDTYEKIKTSQAITWGVKADTRLFGIMNIKT 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
              +GF++D  + LS  +     K+  +   AK +   L++  +D L      T  R+  
Sbjct: 61  SQLEGFEIDLAKELSKKMLGKNIKVNLVQTTAKTKIPLLRNGSVDALLSTMTITKERKKI 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY 171
             + F    +  GQ  ++ +   I +V  L  +G ++    GTT    +  +        
Sbjct: 121 --VDFSTPYFNAGQAILVPQNSKIRNVYDLNKNGITVLAVKGTTAVANIRKFAPKA---- 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   +  +A +A +  A T D   L  +    + P    I+    +  P   A+ 
Sbjct: 175 SVSEYDDYGQAFSALKAGQGQALTSDNGILAGIAA--ENPG-FKIVGGTFTSEPYGIAVR 231

Query: 232 QGDTEWYNIVSWTH 245
           +GDT+    ++   
Sbjct: 232 KGDTKLRKKINQAL 245


>gi|325970438|ref|YP_004246629.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy]
 gi|324025676|gb|ADY12435.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp.
           Buddy]
          Length = 265

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 8/234 (3%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAI 71
           +    T  S  +  L  +K +G+L  G    +  F       G+ +GF++D  +A++  I
Sbjct: 20  LFAAGTKESAVSDPLAALKAKGYLSVGCKVDVPSFGYKNINTGEIEGFEIDLAKAVAKRI 79

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
           F D + I+  P+ AK R   L + ++D+++     T  R       F  I Y D    ++
Sbjct: 80  FGDENAIKLTPVTAKTRGPLLDTGELDMVAATFTVTEERRK--SWDFSTIYYVDAVAVMV 137

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K    +  S L+G +I V    TT+ +L        +      F    EI  A  + R 
Sbjct: 138 KKASPYAVFSDLAGKTIGVAQSATTKKSLEAGAAEAGITLKFNEFATYPEIKVALDSGRV 197

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           DA++ D + L      + +     +L +  +K     A+ +G+T     V+ T 
Sbjct: 198 DAFSVDFAILNGYMEDSTK-----LLTERFAKQDYGIAVKKGNTALLEAVNATI 246


>gi|256618703|ref|ZP_05475549.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
           4200]
 gi|256598230|gb|EEU17406.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
           4200]
          Length = 275

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 97/272 (35%), Gaps = 28/272 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S     +  +KK G +K G+   +
Sbjct: 1   MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R +   I      ++++ + AK R   L + ++D++   
Sbjct: 61  PNFGYMNPDTNKNEGMEPDIARLIVKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            +   +K+         E+  A  + R DA++ D S L              I  D  S 
Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EISKDGFSP 233

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   + +TE     +     ++   E  
Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261


>gi|296167869|ref|ZP_06850052.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896994|gb|EFG76617.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 326

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 10/237 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68
           L   +  F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++
Sbjct: 66  LTASLRPFPTKAQADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 125

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             IF  PS ++Y  L++ ER  ALQ  ++D++ +    T  R     + F  +     Q 
Sbjct: 126 RDIFGAPSHVEYRILSSDERVTALQRSEVDVVVKTMTITCERRK--QVNFSTVYLDANQR 183

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  +   I+ V  LSG  +CV  GTT+   +       +     +      +   A + 
Sbjct: 184 ILAPRDSPITKVGDLSGKRVCVAKGTTSLHRIRQI----DPPPVIVSVVNWADCLVAMQQ 239

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              DA + D S L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 240 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLTNTGLVRFVNGTL 293


>gi|293375607|ref|ZP_06621881.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
 gi|292645824|gb|EFF63860.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
          Length = 279

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 18/250 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K F   +  L+ L        ++        + +I++ G +  G+ +    F  V +N
Sbjct: 1   MKKVFLCFMSFLLTLGVLGACGESNTSQSEARSIEEIQESGKIIIGVFSDKKPFGYVDSN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           GD++G+DV F   ++  +  +   ++Y+P+ A  R   L S ++DI+  N   T  R+  
Sbjct: 61  GDYQGYDVYFGNRIAQDLGVE---VEYVPVEAASRVEYLVSNKVDIILANFTVTEERKE- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +      I+ V QL+G ++ V  GTT E      F  +    + 
Sbjct: 117 -KVDFTLPYMKVALGVVSPDDALITDVEQLNGKTLIVSKGTTAETY----FTENYPNVNL 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F++  E   A    R DA + D + + A     +     V +  + S   +A A+ +G
Sbjct: 172 LKFDQYSEAYNALLDGRGDALSTDNTEVLAWA--LENEGFSVGVESLGSIDTIAAAVQKG 229

Query: 234 DTEWYNIVSW 243
           + E    ++ 
Sbjct: 230 NDELLEWLNN 239


>gi|15599390|ref|NP_252884.1| binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|9950406|gb|AAG07582.1|AE004836_1 probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
          Length = 276

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 98/262 (37%), Gaps = 15/262 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M      + L  +     S + +A  L DI+K+G +  G        + +        G+
Sbjct: 1   MKIRLLGAALAAVFTLIGS-AAHADDLADIRKKGEIVIGTLGTDEPNSFIDPKTRQIIGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD    ++ AI   P    +  ++   R   LQ   +D+L+ +      RE    + F 
Sbjct: 60  EVDLGTEIAKAIGVKP---VFKQISVAARIPELQQGHVDLLAASLTHNKEREAL--VDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 GQ  ++ K  G +S+  L G  +    G T E  +             + FE  
Sbjct: 115 YSIIVTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALP----NAQVVTFETS 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           ++   A +  +  A+  D SAL             + ILP+ +S   LA A  +G+ +  
Sbjct: 171 QQALLALQQGKGQAFVDDESALVNDFGKLGAAAGGYAILPENLSTEALAIAFRKGNPQLK 230

Query: 239 NIVSWTHYAMV---TAEELGIT 257
            +V  T   +     AE+L + 
Sbjct: 231 QLVDSTLAGLERSGAAEQLYLK 252


>gi|11497847|ref|NP_069069.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Archaeoglobus fulgidus DSM 4304]
 gi|2650410|gb|AAB91001.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Archaeoglobus fulgidus DSM 4304]
          Length = 264

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 81/257 (31%), Gaps = 14/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKAN-GD 55
           M K   + +L   +L               +    + G+L  G +     F       G+
Sbjct: 1   MKKVVPILVLLAALLLLGCTQQAEQKEEKAQIKLVEPGYLTVGSDIAYPPFEFTDEKTGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D  + ++  +  +    +++          L + + D++      T  R     
Sbjct: 61  YAGFDIDLMKEIAKRMGLEA---KFVNTAWDGIIPGLLAHKYDVICSAMTITEERAK--Q 115

Query: 116 LAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F    +   Q  I       I  V  L+G  + VQ GTT +           ++    
Sbjct: 116 VDFSDPYFEAKQVIITRADETDIQDVEDLNGKVVAVQQGTTGDFAAQRLKDEKGIQLEIK 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233
            FE   E   A +    DA   D     A     + P  + I+  D  +      A+ + 
Sbjct: 176 RFEGTPEALMAVQKGDADAAIIDN--FVAYIAAKENPGLYRIVESDEFAPEYYGIAVNKD 233

Query: 234 DTEWYNIVSWTHYAMVT 250
           +      ++     +  
Sbjct: 234 NPALLEKINEVLKEIKE 250


>gi|300811388|ref|ZP_07091884.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497623|gb|EFK32649.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 281

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 95/247 (38%), Gaps = 11/247 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63
           F   +L  ++    S S ++S    +K+   +  G+      F+ +   +    GF+VD 
Sbjct: 11  FMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSSKATGFEVDL 70

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA++  I     K++   ++ K R + L+   +D +      T  R     + F    +
Sbjct: 71  ARAVTKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYF 128

Query: 124 FDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             G+  I+ KK  ++S+   + +        G+T +  +  Y          I ++    
Sbjct: 129 MAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA----RVIFYDDYGS 184

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +A + +A   D + L  L   +       +LPD  +  P    I +G+ ++   V
Sbjct: 185 CYNALKAGKTNAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEV 242

Query: 242 SWTHYAM 248
           +     +
Sbjct: 243 NQALKVL 249


>gi|218460738|ref|ZP_03500829.1| putative substrate-binding component of ABC transporter [Rhizobium
           etli Kim 5]
          Length = 279

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 101/258 (39%), Gaps = 6/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   F   ++ L+ +   S       S L ++  RG L  G  +    +    A+   +G
Sbjct: 1   MTISFRAGVISLVAVALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  R ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF
Sbjct: 61  FDVDMGRIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y +G G ++      S  + L  A   V       +       A   +     +E 
Sbjct: 119 TIPYYREGVGLMLKADGKYSDYAALKTAGSSVTISVLQNVYAEAMVHAALPEATVDQYES 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           V+ I  A  + R DA   D S+L         P  +       +    A A+ +GD +W 
Sbjct: 179 VDLIYQALESGRADAAATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236

Query: 239 NIVSWTHYAMVTAEELGI 256
           N V+   +  +T  E   
Sbjct: 237 NFVNTALHEAMTGVEFDF 254


>gi|323721082|gb|EGB30144.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           CDC1551A]
          Length = 329

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 76  FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 135

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S ++Y  L+A ER  ALQ  Q+DI+ +    T  R     + F  +     Q  +  +  
Sbjct: 136 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 193

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VS LSG  +CV  GTT+   + +           +      +   A +    DA +
Sbjct: 194 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 249

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ PD ++  P    I   +T     V+ T 
Sbjct: 250 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 296


>gi|308369386|ref|ZP_07666727.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu002]
 gi|308370400|ref|ZP_07666925.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu003]
 gi|308372885|ref|ZP_07667473.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu005]
 gi|308375151|ref|ZP_07442886.2| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu007]
 gi|308327701|gb|EFP16552.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu002]
 gi|308332063|gb|EFP20914.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu003]
 gi|308339455|gb|EFP28306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu005]
 gi|308347232|gb|EFP36083.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu007]
          Length = 308

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 55  FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 114

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S ++Y  L+A ER  ALQ  Q+DI+ +    T  R     + F  +     Q  +  +  
Sbjct: 115 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 172

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VS LSG  +CV  GTT+   + +           +      +   A +    DA +
Sbjct: 173 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 228

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ PD ++  P    I   +T     V+ T 
Sbjct: 229 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 275


>gi|289744107|ref|ZP_06503485.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           02_1987]
 gi|289684635|gb|EFD52123.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           02_1987]
          Length = 337

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 84  FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 143

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S ++Y  L+A ER  ALQ  Q+DI+ +    T  R     + F  +     Q  +  +  
Sbjct: 144 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 201

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VS LSG  +CV  GTT+   + +           +      +   A +    DA +
Sbjct: 202 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 257

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ PD ++  P    I   +T     V+ T 
Sbjct: 258 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 304


>gi|215402161|ref|ZP_03414342.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           02_1987]
          Length = 329

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 76  FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 135

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S ++Y  L+A ER  ALQ  Q+DI+ +    T  R     + F  +     Q  +  +  
Sbjct: 136 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 193

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VS LSG  +CV  GTT+   + +           +      +   A +    DA +
Sbjct: 194 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 249

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ PD ++  P    I   +T     V+ T 
Sbjct: 250 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 296


>gi|15607552|ref|NP_214925.1| glutamine-binding lipoprotein [Mycobacterium tuberculosis H37Rv]
 gi|15839797|ref|NP_334834.1| amino acid ABC transporter, amino acid-binding protein
           [Mycobacterium tuberculosis CDC1551]
 gi|31791589|ref|NP_854082.1| glutamine-binding lipoprotein [Mycobacterium bovis AF2122/97]
 gi|121636325|ref|YP_976548.1| putative glutamine-binding lipoprotein glnH [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148660176|ref|YP_001281699.1| amino acid ABC transporter substrate-binding protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148821607|ref|YP_001286361.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11]
 gi|167970774|ref|ZP_02553051.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           H37Ra]
 gi|215409923|ref|ZP_03418731.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429231|ref|ZP_03427150.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           EAS054]
 gi|215444497|ref|ZP_03431249.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85]
 gi|218752041|ref|ZP_03530837.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM
           1503]
 gi|219556230|ref|ZP_03535306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17]
 gi|224988797|ref|YP_002643484.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797334|ref|YP_003030335.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           1435]
 gi|254363375|ref|ZP_04979421.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549356|ref|ZP_05139803.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185276|ref|ZP_05762750.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199407|ref|ZP_05766898.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46]
 gi|260203559|ref|ZP_05771050.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85]
 gi|289441790|ref|ZP_06431534.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46]
 gi|289445950|ref|ZP_06435694.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552660|ref|ZP_06441870.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           605]
 gi|289568326|ref|ZP_06448553.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17]
 gi|289572996|ref|ZP_06453223.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85]
 gi|289752440|ref|ZP_06511818.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           EAS054]
 gi|289756480|ref|ZP_06515858.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85]
 gi|289760527|ref|ZP_06519905.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM
           1503]
 gi|294995916|ref|ZP_06801607.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 210]
 gi|297632893|ref|ZP_06950673.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           4207]
 gi|297729868|ref|ZP_06958986.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           R506]
 gi|298523887|ref|ZP_07011296.1| amino acid ABC transporter, amino acid-binding protein
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306774505|ref|ZP_07412842.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu001]
 gi|306787410|ref|ZP_07425732.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu004]
 gi|306796149|ref|ZP_07434451.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu006]
 gi|306966414|ref|ZP_07479075.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu009]
 gi|306970609|ref|ZP_07483270.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu010]
 gi|307078335|ref|ZP_07487505.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu011]
 gi|307082893|ref|ZP_07492006.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu012]
 gi|313657197|ref|ZP_07814077.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           V2475]
 gi|1817677|emb|CAB06581.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium
           tuberculosis H37Rv]
 gi|13879927|gb|AAK44648.1| amino acid ABC transporter, amino acid-binding protein
           [Mycobacterium tuberculosis CDC1551]
 gi|31617175|emb|CAD93282.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium
           bovis AF2122/97]
 gi|121491972|emb|CAL70435.1| Probable glutamine-binding lipoprotein glnH [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134148889|gb|EBA40934.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504328|gb|ABQ72137.1| amino acid ABC transporter substrate-binding protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148720134|gb|ABR04759.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11]
 gi|224771910|dbj|BAH24716.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318837|gb|ACT23440.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           1435]
 gi|289414709|gb|EFD11949.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46]
 gi|289418908|gb|EFD16109.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437292|gb|EFD19785.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           605]
 gi|289537427|gb|EFD42005.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85]
 gi|289542079|gb|EFD45728.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17]
 gi|289693027|gb|EFD60456.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           EAS054]
 gi|289708033|gb|EFD72049.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM
           1503]
 gi|289712044|gb|EFD76056.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85]
 gi|298493681|gb|EFI28975.1| amino acid ABC transporter, amino acid-binding protein
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308216857|gb|EFO76256.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu001]
 gi|308335878|gb|EFP24729.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu004]
 gi|308343320|gb|EFP32171.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu006]
 gi|308355813|gb|EFP44664.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu009]
 gi|308359733|gb|EFP48584.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu010]
 gi|308363675|gb|EFP52526.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu011]
 gi|308367326|gb|EFP56177.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           SUMu012]
 gi|326902236|gb|EGE49169.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis
           W-148]
 gi|328457121|gb|AEB02544.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN
           4207]
          Length = 328

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 75  FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 134

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S ++Y  L+A ER  ALQ  Q+DI+ +    T  R     + F  +     Q  +  +  
Sbjct: 135 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 192

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VS LSG  +CV  GTT+   + +           +      +   A +    DA +
Sbjct: 193 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 248

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ PD ++  P    I   +T     V+ T 
Sbjct: 249 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 295


>gi|167587289|ref|ZP_02379677.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia ubonensis Bu]
          Length = 264

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 91/258 (35%), Gaps = 20/258 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K   V+ L +   F  + +  A +L ++K+RG L+ G+      F      G+ 
Sbjct: 1   MKIALLKKLLVAGL-IGASFTAATAHAADLLDEVKQRGTLRVGLEGTFPPFNSKSPQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  +A+++ +   P    ++          LQ+ + D+++     T  R+ +  L
Sbjct: 60  VGFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--L 114

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F P   +     I  K       S+  L G  + V  GT                    
Sbjct: 115 DFSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E      A R DA   D   L  L   +  P       ++ S +P      +G+
Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGN 227

Query: 235 TEWYNIVSWTHYAMVTAE 252
            ++   +     A + A+
Sbjct: 228 PKFQKAIGDAM-AQLEAD 244


>gi|116050137|ref|YP_791046.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|115585358|gb|ABJ11373.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 268

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 95/246 (38%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K   +  +  + L   S    A  L DI+K G L+         F  V A     +G 
Sbjct: 1   MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +     ++Q LP N   R   L + ++D++  N   T  RE +  + F 
Sbjct: 58  DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTIT--RERAQQVDFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   ++S   L+   + V  GT  E  L + F         I ++  
Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R  +  A T D   L  L        ++ + P  IS   +   I +G+     
Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKSLTE 227

Query: 240 IVSWTH 245
            V  + 
Sbjct: 228 FVDKSL 233


>gi|317049447|ref|YP_004117095.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316951064|gb|ADU70539.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 274

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 12/232 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           T+A  L DIK RG L  G+      +  +  NG+  GF++   R +++ +   P KI+ +
Sbjct: 22  THADTLSDIKARGVLTVGVKNDYPPYGYMDNNGNTVGFEISLARYIANELLGSPDKIKLV 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSV 140
           P+NA  R   L S QIDI+      T  R     + F        G   +  K    +  
Sbjct: 82  PVNASNRMQFLNSGQIDIIMATLGVTPDRAK--QIDFTDEYVSAAGPSILARKAVKFTQW 139

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            QL G  IC   G+    T+ +           + F  + E   A + +RC A   D  +
Sbjct: 140 EQLKGQKICGIQGSYFNKTVTE-----KYGLQLVNFTALPEAYRALQDNRCVAMVFDDMS 194

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           L   KL     S++ I        P+A  + +GD  +   V     A+V AE
Sbjct: 195 LQ-NKLKEPGWSDYKIAVKPYEYLPMAGGLRKGDDAFRAAVDK---AIVKAE 242


>gi|72383932|ref|YP_293286.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72123275|gb|AAZ65429.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 289

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 93/241 (38%), Gaps = 6/241 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDD 74
            +   +A  L  +   G +        V F+ +       GF VD   A+   +      
Sbjct: 11  AAAGVHAETLEKVAATGRITVAYREAAVPFSYLLGPHKAVGFSVDLTEAIVDDVRSRLKQ 70

Query: 75  PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           P  K++Y+P+  + R   L +   D+   +T  T +R   +   F    ++ G   +  +
Sbjct: 71  PDLKVEYIPVTGQNRIPLLVNGTYDLECGSTTNTSMRGKEVA--FSINFFYAGTRLLTKR 128

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI+  + L+  ++   AG+T E  +  +   +N+    I  +   +        R  A
Sbjct: 129 DSGINGYADLAKKTVASTAGSTNEKVVRKHGADNNIDVQMISGKDYADALQLVENDRASA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              D   L+ L+  +  PS   I+ D +   P A  + + D E+  +V  T   ++ + E
Sbjct: 189 LALDDVLLFGLRANSRNPSSLEIVGDTLQVEPYACMVRKDDAEFKKLVDGTITRLMKSGE 248

Query: 254 L 254
            
Sbjct: 249 F 249


>gi|227546810|ref|ZP_03976859.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|312132398|ref|YP_003999737.1| hisj2 [Bifidobacterium longum subsp. longum BBMN68]
 gi|322691558|ref|YP_004221128.1| amino acid ABC transporter substrate-binding protein
           [Bifidobacterium longum subsp. longum JCM 1217]
 gi|227212772|gb|EEI80653.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|311772697|gb|ADQ02185.1| HisJ2 [Bifidobacterium longum subsp. longum BBMN68]
 gi|320456414|dbj|BAJ67036.1| amino acid ABC transporter substrate binding component
           [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 300

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +S +  A  L +IKK G +K  + +    F  V  +G ++G+DV F   L+  +  DP
Sbjct: 45  TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVDP 104

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
               Y  ++   R   L S ++D++  N   T  R+    + F         G +  +  
Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 159

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VSQL G ++ +  GTT E     +F+ +        +++  +   A    R DA++
Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A           V +  +     +APA+ +G+TE  N V+ 
Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNTELLNFVND 261


>gi|300694154|ref|YP_003750127.1| substrate-binding periplasmic (pbp) ABC transporter protein
           [Ralstonia solanacearum PSI07]
 gi|299076191|emb|CBJ35504.1| putative substrate-binding periplasmic (PBP) ABC transporter
           protein [Ralstonia solanacearum PSI07]
          Length = 296

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 6/240 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDP 75
              ++  L  IK  G ++       V F+ + ANG   G+ +D C     A+  ++    
Sbjct: 20  AVASSPTLDRIKATGTVRLAHRENSVPFSYLDANGKPIGYSMDLCMRLVDAIRESLKRPD 79

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+QYL +    R  A+ S + D+   +T     RE    +AF    Y      ++    
Sbjct: 80  LKVQYLQVTPATRMDAIMSGRADLECAST--NNARERREKVAFTIPHYIANGRMLVKTAS 137

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI  +  L G ++    G+     +    +A  +    +      E  A     +  A+ 
Sbjct: 138 GIRQLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHGESFAMVAEGKAQAFA 197

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D   L  +K     P+++ I+       P A  + + D E+  ++      ++   E  
Sbjct: 198 MDDVLLAGIKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMARVMEDGEAE 257


>gi|238063458|ref|ZP_04608167.1| glutamate binding protein [Micromonospora sp. ATCC 39149]
 gi|237885269|gb|EEP74097.1| glutamate binding protein [Micromonospora sp. ATCC 39149]
          Length = 326

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 83/231 (35%), Gaps = 7/231 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +    +     IK  G +  G+           A G   GFD++  + ++S +  DP+KI
Sbjct: 73  ANVAGSPTFDKIKSSGKVTVGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPAKI 132

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y  + +  R  A++  +ID        T  R     ++F    +  GQ  ++ K +   
Sbjct: 133 EYKEIASANRETAIKGGEIDYYVGTYSITDKR--KNDISFAGPYFIAGQDLLVRKDETTI 190

Query: 139 SVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +    L G  +C   G+T    + D  +      + + F+   E  +     + DA T D
Sbjct: 191 TGKDTLKGKKVCSATGSTPIQKVRD--EGLTEPENIVEFKTYSECVSQLLDKKVDAVTTD 248

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            + L         P E  +     S       + + D    + V+    A 
Sbjct: 249 DAILKGYAAQ--NPDELKVAGQPFSTEKYGIGLPKDDKALRDYVNDQIEAA 297


>gi|241113591|ref|YP_002973426.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861799|gb|ACS59465.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 279

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 98/250 (39%), Gaps = 4/250 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L +  L  T    + S L ++  RG L  G  +    +    A+   +GFDVD    
Sbjct: 9   VMSLAVAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF    Y +G
Sbjct: 69  IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++      +  + L  A   V       +       A   +     ++ V+ I  A 
Sbjct: 127 VGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYDSVDLIYQAL 186

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+L         P  +       +    A A+ +GD +W N V+   +
Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244

Query: 247 AMVTAEELGI 256
             +T  E   
Sbjct: 245 EAMTGVEFDF 254


>gi|301801478|emb|CBW34170.1| putative glutamine-binding protein precursor [Streptococcus
           pneumoniae INV200]
          Length = 254

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKIV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   + +  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDTLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|209518146|ref|ZP_03266975.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209501450|gb|EEA01477.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 266

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 82/250 (32%), Gaps = 14/250 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      +  L L  L FT+ + +A  +L  +K+ G LK G+      F     +G+ +G
Sbjct: 1   MKLSKLLIGALALFALGFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGELEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  +A+++ +   P    ++P        ALQS + D++      T  R+    L F
Sbjct: 61  FDVDVAKAVAAKLGVKPE---FIPTEWSGIIAALQSGKFDVIINQVTITPQRK--QVLDF 115

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                +     I          S+ +  G         T      D         +   +
Sbjct: 116 SQPYTYSAAQLIQRADDKREFKSLDEFKGDKKLGVTLGTNY----DQMARAVPGINVQTY 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E      A R DA   D   L  +   +  P     +     +  +     + + +
Sbjct: 172 PGAPEKLRDLAAKRIDATIDDRLMLPYIIKNSQLPLRTGAVLKGADQE-MGIPFRKDNPK 230

Query: 237 WYNIVSWTHY 246
           +   +     
Sbjct: 231 FAKALDDALT 240


>gi|300705482|ref|YP_003747085.1| amino-acid ABC transporter binding protein ybej [Ralstonia
           solanacearum CFBP2957]
 gi|299073146|emb|CBJ44504.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia
           solanacearum CFBP2957]
          Length = 299

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 92/252 (36%), Gaps = 7/252 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +   + +       +   L  I+  G ++       V F+     G   G+ +D C 
Sbjct: 10  LAVLAVPLAVSAVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYTDG-GKPIGYSIDICS 68

Query: 66  ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +  A    +     K+QY+P+ A  R   + S + D+   +T      +    +AF   
Sbjct: 69  RVVDAIRTSLKRPELKVQYVPVTAANRMDTIASGKADLECGST--NNAPDRREKVAFTIP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y      ++    G+     L G ++    G++    +     A  M    +    ++ 
Sbjct: 127 HYITKGRMLVKASSGLQQWEDLHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTNDLKT 186

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +     + DA+ GD   L  ++ T+D P+++V+       S  A  + + D ++  ++
Sbjct: 187 AFSMLSTGKADAFAGDDVLLAGMRATSDNPTDYVVAGKTQLVSSYAMMMSKQDADFKKLI 246

Query: 242 SWTHYAMVTAEE 253
             +   ++   E
Sbjct: 247 DQSMTRLIVDGE 258


>gi|118468998|ref|YP_885192.1| extracellular solute-binding protein, family protein 3
           [Mycobacterium smegmatis str. MC2 155]
 gi|118170285|gb|ABK71181.1| Bacterial extracellular solute-binding protein, family protein 3
           [Mycobacterium smegmatis str. MC2 155]
          Length = 322

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 102/298 (34%), Gaps = 62/298 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL--------------------------------- 27
           M +   + +  L  +     S  A  L                                 
Sbjct: 1   MKRLLMLLVSTLTAMSLVGCSQAAPALNLPSLTLAPPTPAGMEEIPPQPVRLPEIDNDDC 60

Query: 28  -------------------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67
                               +I+ RG L  G++ G   F+      G   GFDVD    +
Sbjct: 61  NRTASLRPFSNKEEAEAAVANIRARGRLIVGLDIGSNLFSFRDPITGQITGFDVDIAGEV 120

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           S  IF  PSK++Y  L++ +R  AL++ Q+DI+ +    T  R+    + F  +     Q
Sbjct: 121 SRDIFGTPSKVEYRILSSADRITALRNNQVDIVVKTMTITCERKKL--VNFSTVYLMANQ 178

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             +  +   IS  S LSG  +CV  GTT+   +     +       +      +   A +
Sbjct: 179 RILASRDSNISQASDLSGRRVCVVDGTTSLQRIQQISPS----PIIVSVVTWADCLVALQ 234

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + DA + D S L  L      P  H++ P +    P    +   +T    +V+ T 
Sbjct: 235 QRQADAVSTDDSILAGLVAQ--DPYLHIVGPSLSQ-EPYGIGVNLENTGLVRVVNGTL 289


>gi|225858444|ref|YP_002739954.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae 70585]
 gi|225720039|gb|ACO15893.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae 70585]
          Length = 254

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   + +  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTNKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|111225073|ref|YP_715867.1| putative glutamate ABC transporter glutamate binding protein
           [Frankia alni ACN14a]
 gi|111152605|emb|CAJ64346.1| putative glutamate binding protein of ABC transporter system
           [Frankia alni ACN14a]
          Length = 330

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 87/238 (36%), Gaps = 9/238 (3%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
                  +     + +  +   G +  G       F     +G  +GFDV+    ++ A+
Sbjct: 69  AAPTGAAASFAPGTTMARLHDAGKITVGTKFDQNLFGLKNLSGKPEGFDVEIAEIITDAL 128

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K+ ++   +  R   +Q  ++D++         R+    + F    Y  GQ  ++
Sbjct: 129 GIPRDKVNFVETVSANREPFIQQGRVDMVVATYTINDKRKKV--VDFAGPYYVAGQSIMV 186

Query: 132 -HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             K   I+    L+G  +C  +G+T    +     A       ++F+   +   A +  +
Sbjct: 187 AKKNTDITGKDSLAGKKVCSVSGSTPAENIRKVAPAA----QLVLFDVYSKCADALKNGQ 242

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            DA T D   L  L   +  P    ++    +K P    I +GDT +   ++ T  A 
Sbjct: 243 VDAVTTDNVILLGLI--DKDPDAFKLVGGTFTKEPYGIGIKKGDTAFRTFINDTLEAS 298


>gi|169631301|ref|YP_001704950.1| glutamine-binding protein GlnH [Mycobacterium abscessus ATCC 19977]
 gi|169243268|emb|CAM64296.1| Probable glutamine-binding protein GlnH [Mycobacterium abscessus]
          Length = 327

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 10/226 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           + N   +  I+KRG L  G++ G   F+      G+  GFDVD    +S  IF  P +++
Sbjct: 78  AANDEAVAAIRKRGRLVVGLDIGSNLFSFRDPITGELTGFDVDIAGEVSRDIFGTPERVE 137

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  L++ +R  AL++  +DI+ +    T  R     + F  +   + Q  +  +  GI++
Sbjct: 138 YRILSSADRVAALKNSTVDIVVKTMTITCARRK--EVNFSSVYLMNYQRILTSRDSGITN 195

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              LSG  +C   GTT+   L+            +      +   A +  + DA + D S
Sbjct: 196 AQDLSGRRVCAARGTTSLNRLSQITP----PPVIMSVVTWADCLVALQQRQVDAVSTDDS 251

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L  L      P  H+I P+ +S  P    I   +T+    V+ T 
Sbjct: 252 ILAGLMSQ--DPYLHIIGPN-MSDEPYGIGIKLENTDLVRYVNRTL 294


>gi|291166920|gb|EFE28966.1| amino acid ABC transporter, amino acid-binding protein [Filifactor
           alocis ATCC 35896]
          Length = 260

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 92/261 (35%), Gaps = 14/261 (5%)

Query: 1   MYKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +   V  L   L +    S S      G+  +      G++          ++G+  G
Sbjct: 1   MKQKNIVLFLVGILFLFSLCSCSNKQPSQGNNSETSNYVIGLDDTFAPMGFRDSSGELVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  + ++         + +  ++   +   L +K ID++      +  R+    +AF
Sbjct: 61  FDIDLAKEIARR---KNFTVTFQSIDWAMKENELNAKNIDMIWNGYSISEERK--QKVAF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 D Q  I  K   I+++  L G  I +QA +T    +             + +  
Sbjct: 116 STPYVEDKQLVITMKDSPITTIEDLKGKVISLQAESTAIDAVNQNPTISTSLAKIVEYPS 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E+    +  RCDA   D   L    +  +   E  IL + ++   +A  I + DTE  
Sbjct: 176 NNEVFQDLQTGRCDAIVVDE-ILARYYMKQNASQEFRILEEALATEYMAVGIRKEDTELL 234

Query: 239 NIVSWTHYAMVTAEELGITQK 259
             ++         EEL     
Sbjct: 235 QAINDGL------EELKADGT 249


>gi|170017620|ref|YP_001728539.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169804477|gb|ACA83095.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 283

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 83/267 (31%), Gaps = 26/267 (9%)

Query: 1   MYKDFFV-SILCLIILFF-----------------TSFSTNASILGDIKKRGFLKCGINT 42
           M +   V +++ L  L                   T  +        IK+   +  G++ 
Sbjct: 4   MKRKIIVNTLVGLAFLAIVIWAILSLGVGNKQNKDTQATAQKDDWQRIKQEKQITIGLDD 63

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
             V        G+  GFDVD   A+  ++     K+++ P++   +   L +  ID +  
Sbjct: 64  TFVPMGFRNKEGNIVGFDVDLANAVFKSM---DIKVKWQPIDWSMKETELNTGNIDAIWN 120

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA- 161
               T  R   +   F    +   Q  +  KK  I+  S + G  +  Q  ++ +     
Sbjct: 121 GYTKTTARAKQVA--FSDTYHRATQVLVTLKKNNINRFSDMKGKVLGDQTASSGDEGFNK 178

Query: 162 --DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
             D  K +      + ++  ++      A R D    D             P ++ +   
Sbjct: 179 YPDVLKQYVKDQKVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQPNPKDYTVTVG 238

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246
                  A    + D +    V+    
Sbjct: 239 AFPVDMTAVGFRKSDNKLREAVNKALT 265


>gi|71733635|ref|YP_274850.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298487226|ref|ZP_07005275.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|71554188|gb|AAZ33399.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298158250|gb|EFH99321.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330985341|gb|EGH83444.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 283

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L   + +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|289627186|ref|ZP_06460140.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289648680|ref|ZP_06480023.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868023|gb|EGH02732.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 283

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L  ++ +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFTLANSAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|116248747|ref|YP_764588.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253397|emb|CAK11785.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 279

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 4/250 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L +  L  T      S L ++  RG L  G  +    +    A+   +GFDVD    
Sbjct: 9   VMSLAVAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF    Y +G
Sbjct: 69  IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++      +  + L  A   V       +       A   +     ++ V+ I  A 
Sbjct: 127 VGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYDSVDLIYQAL 186

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+L         P  +       +    A A+ +GD +W N V+   +
Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244

Query: 247 AMVTAEELGI 256
             +T  E   
Sbjct: 245 EAMTGVEFDF 254


>gi|325836784|ref|ZP_08166251.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter
           sp. HGF1]
 gi|325491162|gb|EGC93451.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter
           sp. HGF1]
          Length = 279

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 18/250 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K F   +  L+ L        ++        + +I++ G +  G+ +    F  V +N
Sbjct: 1   MKKVFLCFMSFLLTLGILGACGESNTSQSEARSIEEIQESGKIIIGVFSDKKPFGYVDSN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           GD++G+DV F   ++  +  +   ++Y+P+ A  R   L S ++DI+  N   T  R+  
Sbjct: 61  GDYQGYDVYFGNRIAQDLGVE---VEYVPVEAASRVEYLVSNKVDIILANFTVTEERKE- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +      I+ V QL+G ++ V  GTT E      F  +    + 
Sbjct: 117 -KVDFTLPYMKVALGVVSPDDALITDVEQLNGKTLIVSKGTTAETY----FTENYPNVNL 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F++  E   A    R DA + D + + A     +     V +  + S   +A A+ +G
Sbjct: 172 LKFDQYSEAYNALLDGRGDALSTDNTEVLAWA--LENQGFSVGVESLGSIDTIAAAVQKG 229

Query: 234 DTEWYNIVSW 243
           + E  + ++ 
Sbjct: 230 NDELLDWLNN 239


>gi|229817228|ref|ZP_04447510.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM
           20098]
 gi|229785017|gb|EEP21131.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM
           20098]
          Length = 275

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K +F   L  +     +   +   S     +  G ++ GI     G      +G + G
Sbjct: 1   MKKTWFKRALAALCALTCAVSLAGCGSS----QSDGKIRIGIKFDQPGLGFK-KSGTYVG 55

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + ++  +     +I +    +K+R   LQ+  +D +      T  R+    + F
Sbjct: 56  FDVDVAKYIAKKLGYTEDEIVWKEAPSKQREAMLQNGDVDFIIATYSITDERKKV--VDF 113

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +  GQ  ++ K    +     L+G  +C   G+T+ +T+ + F     +   +   
Sbjct: 114 AGPYFVAGQDLLVRKGDTSVRGPEDLNGKRLCSVTGSTSAVTVKEKFA---NEVQLMEQP 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   A  +   DA T D   L  L   +       ++    ++      + +G  + 
Sbjct: 171 GYAECATALFSGIVDAVTTDDIILAGLASASR--GRLEVVGKPFTQEYYGVGVKKGSNDL 228

Query: 238 YNIVSWTHYAM 248
              ++     M
Sbjct: 229 KKKINAAITDM 239


>gi|148988975|ref|ZP_01820375.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|168492770|ref|ZP_02716913.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC3059-06]
 gi|147925472|gb|EDK76549.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|183576870|gb|EDT97398.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC3059-06]
          Length = 254

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLVAAKPVQANTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   + +  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|330890817|gb|EGH23478.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 283

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L   + +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       +    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWNPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|327394992|dbj|BAK12414.1| glutamine-binding protein precursor GlnH [Pantoea ananatis AJ13355]
          Length = 280

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 4   DFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            F  ++  ++ L           T+ +  AS L  + +RG L+ G       F      G
Sbjct: 12  RFLPALFTVVALAGCTPTDNKKETAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAG 71

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DVD  +AL+ A+      ++ +   +  R   LQ+ ++D++  N    L R   +
Sbjct: 72  NPDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEI 128

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G  F        +  ++ K  GI S   ++G +I    G+T      D  ++  +     
Sbjct: 129 G--FTQPYVVASEAMLVRKVSGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQ 182

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++  +    A +  + DA   D + L         P+  V    ++     A  + QGD
Sbjct: 183 EYDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLEVTNEALVPLEYNAFGVKQGD 240

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             W N ++   + +  + E  
Sbjct: 241 QVWTNYLNEFLFEINASGENA 261


>gi|254818982|ref|ZP_05223983.1| GlnH [Mycobacterium intracellulare ATCC 13950]
          Length = 325

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 10/237 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68
           L   +  F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++
Sbjct: 65  LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDLAGEIA 124

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             IF  PS ++Y  L++ ER  ALQ  ++DI+ +    T  R     + F  +     Q 
Sbjct: 125 RDIFGAPSHVEYRILSSDERVTALQRGEVDIVVKTMTITCDRRKL--VNFSTVYLDANQR 182

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  +   I  VS LSG  +CV  GTT+   +       +     +      +   A + 
Sbjct: 183 ILAPRDSSIVKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPVIVSVVNWADCLVAMQQ 238

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              DA + D S L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 239 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTPLVRFVNGTL 292


>gi|322368978|ref|ZP_08043545.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           substrate-binding protein [Haladaptatus paucihalophilus
           DX253]
 gi|320551709|gb|EFW93356.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           substrate-binding protein [Haladaptatus paucihalophilus
           DX253]
          Length = 275

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 23/257 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F       I     + + +A      +  G ++ G +     F      G+  GFDV
Sbjct: 3   RRSFLRGTGGAIAALTFAENASA------QNNGTIRIGSDIPYRPFEYRTKTGELVGFDV 56

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+     D     +++  +      +L +    ++      T  R  S  + F   
Sbjct: 57  DIANAVFEGQLDR--NYEFVQTSFDTIIPSLNNGNFRVIMSAMTITPER--SKQVDFSDP 112

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +   Q  ++ K   I+S+  L G ++ VQ GTT E    D  K  N       ++++  
Sbjct: 113 YFTAYQTVLILKNSDITSLQDLKGETVAVQKGTTGEAAAQDLKKQFNGDLTIDSYDQIPG 172

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR-------------PSEHVILPDIISKSPLAP 228
             +A   ++  A   D +        ND                E+      ++      
Sbjct: 173 AFSALGNNQAAAVINDNTVNAEFAQQNDNVTFLKGEGAAQEQGKENAPPYLTLTVEEYGI 232

Query: 229 AIIQGDTEWYNIVSWTH 245
           A  + D +  N V+   
Sbjct: 233 AFRKNDDQLKNQVNDAL 249


>gi|163856729|ref|YP_001631027.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella petrii DSM 12804]
 gi|163260457|emb|CAP42759.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella petrii]
          Length = 262

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 8/249 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V + C   L       +             +  G++           N    GF
Sbjct: 1   MKKLTAVFLACATSLLAACGQGDDPAPQASAPAARKIVVGLDDNFPPMGFRDENNQLVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  R  +  +  +   +++ P++   +   L  K++D L      T  R+ ++   F 
Sbjct: 61  DIDMAREAARRMGIE---VEFKPIDWSAKEAELNGKRVDALWNGLTITEERKKNIA--FT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                + Q  ++ +   + + + L+G  +  Q G++    +    +         +F   
Sbjct: 116 APYMANHQIILVAQASPVQNKADLAGRVVGAQDGSSAVDAIKKDAQVAASLKELKLFGDN 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                   A R DA   D   +    L + R  ++ +L +          + + D E   
Sbjct: 176 VTALMDLSAGRLDAVVVDE--VVGRYLASKRAGQYRVLDENFGTEDYGVGLRKDDAELLA 233

Query: 240 IVSWTHYAM 248
            +  T  AM
Sbjct: 234 KLDQTLDAM 242


>gi|302388441|ref|YP_003824263.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
 gi|302199069|gb|ADL06640.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
          Length = 290

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 36/276 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL------------------GDIKKR--------- 33
           M K   ++ +    +  +  S   + +                     K+          
Sbjct: 1   MKKKILLAAVFGAAVLASGCSGQKNAVTASAASDPAASTTKESANETAKETEAGKKEEAG 60

Query: 34  -GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G    G +        V  NG++ GFD++  + +++ +          P+    + + L
Sbjct: 61  TGTFTVGFDQDFPPMGFVGENGEYTGFDLELAQEVANRLGKKFVP---QPIAWDAKDMEL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           +S  ID +      T       G  +      + Q F++ K   I +++ LSG  + VQA
Sbjct: 118 ESGNIDCIWNGFTITG---REEGYTWTKPYMENSQVFVVGKDSSIKTLADLSGKIVEVQA 174

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            ++ E  L    K                          DA   D   + A      R +
Sbjct: 175 DSSAEKALQSDEKLAGTFGTLQTTPDYNTAFMDLEMGAVDAIAMD--VIVAAYQIEQRKA 232

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           + +IL + ++         +G+    + V     AM
Sbjct: 233 DFIILDEALAAEEYGVGFKKGNETLRDQVQEQLEAM 268


>gi|212716942|ref|ZP_03325070.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660227|gb|EEB20802.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM
           16992]
          Length = 279

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 89/251 (35%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +      +F  S              G ++ GI     G      +G + GFD
Sbjct: 10  MLRRVIATFCACACVFAVSACGADD------ADGKIRVGIKFDQPGLGFK-KSGTYVGFD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +     +I +    +K+R   LQ+  +D +      T  R+    ++F  
Sbjct: 63  VDVAKYIAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAG 120

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  GQ  ++ K    I     L+G  +C   G+T+ +T+ + F     +   +     
Sbjct: 121 PYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVTGSTSAVTVKEKFA---NEVQLMEQPGY 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +   DA T D   L  L   +       ++    ++      I + DT+   
Sbjct: 178 AECATALFSGIVDAVTTDDIILAGLASASR--GRLRVVGKPFTQEYYGVGIKKDDTQLAT 235

Query: 240 IVSWTHYAMVT 250
            ++     M+ 
Sbjct: 236 RINNAIADMIQ 246


>gi|330960987|gb|EGH61247.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 283

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L   + + + S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFTLANAAQAADGSKLDAVLKRGNLIVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|300697784|ref|YP_003748445.1| substrate-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum CFBP2957]
 gi|299074508|emb|CBJ54059.1| putative substrate-binding periplasmic (PBP) ABC transporter
           protein [Ralstonia solanacearum CFBP2957]
          Length = 279

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 89/240 (37%), Gaps = 6/240 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75
              ++  L  IK  G ++     G V F+ + A G   G+ +D C  L  AI ++     
Sbjct: 3   AVASSPTLDRIKATGAIRLAHREGSVPFSYLDAGGKPIGYSMDLCMRLVDAIRENLKRPD 62

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+QYL +    R  A+ + + D+   +T     RE    +AF    Y      ++    
Sbjct: 63  LKVQYLQVTPATRMDAIMNGKADLECAST--NNARERRDKVAFTIPHYIANGRMLVKTAS 120

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI  +  L G ++    G+     +    +A  +    +      E  A     +  A+ 
Sbjct: 121 GIHQLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHAESLAMLADGKAQAFA 180

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D   L  +K     P+++ I+       P A  + + D E+  ++      ++   E  
Sbjct: 181 MDDVLLAGMKANTKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMARLMEDGEAE 240


>gi|118618243|ref|YP_906575.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99]
 gi|183980737|ref|YP_001849028.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M]
 gi|118570353|gb|ABL05104.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99]
 gi|183174063|gb|ACC39173.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M]
          Length = 328

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + DI+ RG L  G++ G   F+      G+  GFDVD    ++  IF  P
Sbjct: 75  FPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIASEVARDIFGGP 134

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           + ++Y  L+A ER  ALQS Q+D++ +    T  R     + F  +     Q  +  +  
Sbjct: 135 THVEYRILSAAERITALQSSQVDVVVKTMTITCERRKL--VNFSTVYLDANQRILTSRDS 192

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I  VS LSG  +CV  GTT+   + +           +      +   A +    DA +
Sbjct: 193 PIFKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 248

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 249 TDDTILAGL--VEEDPYLHIVGPN-MANQPYGIGINLDNTGLVRFVNGTL 295


>gi|108797521|ref|YP_637718.1| extracellular solute-binding protein [Mycobacterium sp. MCS]
 gi|119866607|ref|YP_936559.1| extracellular solute-binding protein [Mycobacterium sp. KMS]
 gi|108767940|gb|ABG06662.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. MCS]
 gi|119692696|gb|ABL89769.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 331

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 10/231 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + +  I++RG L  G++ G   F+      GD  GFDVD    ++  IF  P
Sbjct: 78  FPTRAEADAAVAYIRERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEIARDIFGSP 137

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +++ Y  L++ +R +ALQ+ Q+D++ ++   T  R+  +G  F  +     Q  +  +  
Sbjct: 138 AQVDYRILSSADRIVALQNNQVDVVVKSMTITCERKKKVG--FSTVYLNADQRILAPRDS 195

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+  + LSG  +CV  GTT+   +             +      +   A +  + DA +
Sbjct: 196 AITRAADLSGRRVCVVKGTTSLRRVQQISP----PPIIVSTVTWADCLVALQQRQVDAVS 251

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            D + L  L      P  H++ P  +++ P    +   +T     V+ T  
Sbjct: 252 TDDAILAGLVAQ--DPYLHIVGPS-MNQEPYGIGVNLENTGLVRFVNGTLQ 299


>gi|126433143|ref|YP_001068834.1| extracellular solute-binding protein [Mycobacterium sp. JLS]
 gi|126232943|gb|ABN96343.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 331

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 10/231 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + +  I++RG L  G++ G   F+      GD  GFDVD    ++  IF  P
Sbjct: 78  FPTRAEADAAVAYIRERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEIARDIFGSP 137

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +++ Y  L++ +R +ALQ+ Q+D++ +    T  R+  +G  F  +     Q  +  +  
Sbjct: 138 AQVDYRILSSADRIVALQNNQVDVVVKTMTITCERKKKVG--FSTVYLNADQRILAPRDS 195

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+  + LSG  +CV  GTT+   +             +      +   A +  + DA +
Sbjct: 196 AITRAADLSGRRVCVVKGTTSLRRVQQISP----PPIIVSTVTWADCLVALQQRQVDAVS 251

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            D + L  L      P  H++ P  +++ P    +   +T     V+ T  
Sbjct: 252 TDDAILAGLVAQ--DPYLHIVGPS-MNQEPYGIGVNLENTGLVRFVNGTLQ 299


>gi|220924480|ref|YP_002499782.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219949087|gb|ACL59479.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 302

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 86/235 (36%), Gaps = 6/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80
             L  IK+ G +  G     V F+ +  +    GF +D C  +  A+         K+ Y
Sbjct: 31  GTLKKIKETGTIVIGYRESSVPFSYLDNDQKPIGFSMDLCGHVVEAVKKKLSLSDLKVAY 90

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+N+  R   + +  +D+   +T   L R+  +   F   T+     ++     GISS 
Sbjct: 91  NPVNSATRLPLVANGTVDLECGSTANQLARQKQVA--FSVSTFVAQFKWLTRVDSGISSP 148

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++ V AGT T   L    +   ++      +   E        R  A+  D   
Sbjct: 149 DDLKGRNVVVTAGTNTAQFLNKLNQEQKLQLTITQGKDHAESFLLVETGRASAFMEDDIL 208

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L  +K     P+   IL    S  P A    + D  +  +V  T   ++ +    
Sbjct: 209 LAGVKANAKEPARFKILDKAYSADPYALMFRRDDPAFKAVVDETLIGLMKSGAFA 263


>gi|319645105|ref|ZP_07999338.1| arginine-binding extracellular protein artP [Bacillus sp. BT1B_CT2]
 gi|317392914|gb|EFV73708.1| arginine-binding extracellular protein artP [Bacillus sp. BT1B_CT2]
          Length = 255

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 91/255 (35%), Gaps = 13/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   +    T+  T++S          L  G +     F     +    GFD
Sbjct: 1   MKKWMLLVVTACVTFALTACGTSSSSDDK----KTLVMGTSADYPPFESKDGD-KIVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL+     +   I+   ++      AL++ ++DI+      T  R+    + F  
Sbjct: 56  VDLAEALAEKTGHE---IEVKDMDFNGLVTALKTNKVDIVLSGMTPTPKRKK--QVDFSN 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y      +  K  GI S+  L G ++ VQ G+  E    +     +         R+ 
Sbjct: 111 VYYTAHNMIVTKKSSGIKSLDDLKGKTVGVQLGSIQEEKAKELTP--DYDLKVENRNRIS 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++    +A R DA   +          N+  + + +  +   K+  A A  +G ++    
Sbjct: 169 DLTEEIKAGRFDAAIIEDIVAEKYINKNEELAGYNLPKEPDEKAGSAIAFKKG-SDLTEK 227

Query: 241 VSWTHYAMVTAEELG 255
            +     M  + EL 
Sbjct: 228 FNKALEEMEKSGELD 242


>gi|302537785|ref|ZP_07290127.1| glutamate binding periplasmic protein [Streptomyces sp. C]
 gi|302446680|gb|EFL18496.1| glutamate binding periplasmic protein [Streptomyces sp. C]
          Length = 301

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 89/235 (37%), Gaps = 14/235 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +      +KRG L  G+        E    +G + GFD++  + +++++  DP  I++ 
Sbjct: 49  ESRTWQKARKRGRLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMAASLGFDPKTIEFK 108

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSV 140
            + +  R  ALQ+ QID           R+  +G  F    +  GQ   +   +K I   
Sbjct: 109 TIASANRETALQNGQIDYYVGTYTINDNRKKQVG--FAGPYFMAGQSLLVRRNEKDIKGP 166

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  +C  AG+T    L   F         + ++           ++ DA + D S 
Sbjct: 167 EDLAGKKVCSAAGSTPYQRLQREFPKA----VLVAYDTYSVCVDNLLTYQVDAVSTDDSI 222

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L         P E  ++ +  SK P    + +GD        +     + A+E  
Sbjct: 223 LLGYAAKV--PEELKVVGEPFSKEPYGIGVPRGDDAL----RFALDDALEADEKN 271


>gi|107103712|ref|ZP_01367630.1| hypothetical protein PaerPA_01004783 [Pseudomonas aeruginosa PACS2]
 gi|218889476|ref|YP_002438340.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254237070|ref|ZP_04930393.1| hypothetical protein PACG_03107 [Pseudomonas aeruginosa C3719]
 gi|254242877|ref|ZP_04936199.1| hypothetical protein PA2G_03646 [Pseudomonas aeruginosa 2192]
 gi|126169001|gb|EAZ54512.1| hypothetical protein PACG_03107 [Pseudomonas aeruginosa C3719]
 gi|126196255|gb|EAZ60318.1| hypothetical protein PA2G_03646 [Pseudomonas aeruginosa 2192]
 gi|218769699|emb|CAW25459.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
          Length = 276

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 98/262 (37%), Gaps = 15/262 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M      + +  +     S + +A  L DI+K+G +  G        + +        G+
Sbjct: 1   MKIRLLGAAVAAVFTLIGS-AAHADDLADIRKKGEIVIGTLGTDEPNSFIDPKTRQIIGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD    ++ AI   P    +  ++   R   LQ   +D+L+ +      RE    + F 
Sbjct: 60  EVDLGTEIAKAIGVKP---VFKQISVAARIPELQQGHVDLLAASLTHNKEREAL--VDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 GQ  ++ K  G +S+  L G  +    G T E  +             + FE  
Sbjct: 115 YSIIVTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALP----NAQVVTFETS 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           ++   A +  +  A+  D SAL             + ILP+ +S   LA A  +G+ +  
Sbjct: 171 QQALLALQQGKGQAFVDDESALVNDFGKLGAAAGGYAILPENLSTEALAIAFRKGNPQLK 230

Query: 239 NIVSWTHYAMV---TAEELGIT 257
            +V  T   +     AE+L + 
Sbjct: 231 QLVDSTLAGLERSGAAEQLYLK 252


>gi|322435380|ref|YP_004217592.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9]
 gi|321163107|gb|ADW68812.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9]
          Length = 311

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 86/305 (28%), Positives = 139/305 (45%), Gaps = 13/305 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            LIIL   S    A  +  I+    L+C I+     +     +G    FD++ C A++ A
Sbjct: 5   LLIILATLSLPACAQSIETIRTTKLLRCAIDQEPPEYTTEDLHGPRVAFDLELCHAVALA 64

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           I  D      L  +  E    L+++  D L+      L    + GL        DG GF+
Sbjct: 65  IGPDIKVQPILVSDEAEAISVLKARHAD-LAPTLSLNLTNATTPGLWLGLPIVLDGTGFM 123

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           +        V  LSG  IC  A T TE  L  +F  +++ + P  F    E+DAAY    
Sbjct: 124 VPTATL--DVKSLSGKKICFFAETETETILKTWFTQNHLDFLPYPFSEEGEMDAAYTTGN 181

Query: 191 CDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           C A  GD++ L + +    R +  + +LP +I+ +PLAPA    D     + +WT+  ++
Sbjct: 182 CAAMAGDLTRLASTRQNYGRAAARYKLLPTLIASAPLAPAS--TDPTLTQLATWTNQLLL 239

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AE L     NI  + + + +P +QR LG  ++  +G  L L   W  R++  +GNY ++
Sbjct: 240 NAEAL-----NITHIPEHSQDPAIQRLLG--QTHELGPRLHLDDAWPIRVLTTLGNYADL 292

Query: 310 FDRNL 314
           + R L
Sbjct: 293 YARTL 297


>gi|291618612|ref|YP_003521354.1| GlnH [Pantoea ananatis LMG 20103]
 gi|291153642|gb|ADD78226.1| GlnH [Pantoea ananatis LMG 20103]
          Length = 280

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 4   DFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            F  ++  ++ L           T+ +  AS L  + +RG L+ G       F      G
Sbjct: 12  RFLPALFTVVALAGCTPTDNKNETAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAG 71

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DVD  +AL+ A+      ++ +   +  R   LQ+ ++D++  N    L R   +
Sbjct: 72  NPDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEI 128

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G  F        +  ++ K  GI S   ++G +I    G+T      D  ++  +     
Sbjct: 129 G--FTQPYVVASEAMLVRKVSGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQ 182

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++  +    A +  + DA   D + L         P+  V    ++     A  + QGD
Sbjct: 183 EYDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLEVTNEALVPLEYNAFGVKQGD 240

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             W N ++   + +  + E  
Sbjct: 241 QVWTNYLNEFLFEINASGENA 261


>gi|239827641|ref|YP_002950265.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
 gi|239807934|gb|ACS24999.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
          Length = 260

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 12/259 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDW 56
           M K   FF++ + LI L     +      G  +++  L+ G +     F  +      + 
Sbjct: 1   MKKSLLFFIASILLIGLLSACGTGGEQKNGSGEQKKVLRMGTSADYAPFEYIDTTKGNEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  + ++  +  +    + + ++      ALQS ++D +      T  R+    +
Sbjct: 61  IGFDVDLAKMITKELGYE---FEIVDMDFTGLIPALQSGKVDFVLAGMTPTKERKK--NV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  + Y      +  K  GI +V  L G ++ VQ G+  E        A  +       
Sbjct: 116 DFSDVYYVARNMIVSKKGSGIKTVEDLKGKTVGVQTGSIQEGEANKI--AKKVDMKIESR 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            R+ E+    +A R DA   + +       +++   E   +P    KS  A A  +G ++
Sbjct: 174 NRIPELIQEIQAGRFDAAIIEDTVAKGYLDSSNGKLEGHTIPTDKEKSGYAIAFPKG-SK 232

Query: 237 WYNIVSWTHYAMVTAEELG 255
             +  +      +   E+ 
Sbjct: 233 LRDEFNKVLQEKMKNGEVD 251


>gi|315039013|ref|YP_004032581.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1112]
 gi|325957438|ref|YP_004292850.1| amino acid ABC transporter [Lactobacillus acidophilus 30SC]
 gi|312277146|gb|ADQ59786.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1112]
 gi|325334003|gb|ADZ07911.1| amino acid ABC transporter [Lactobacillus acidophilus 30SC]
 gi|327184146|gb|AEA32593.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1118]
          Length = 272

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K +   +L  ++L  T        +        I ++  +  G++   V     K NG
Sbjct: 1   MKKRWIFVLLATLMLVLTGCESVQERANTQDTWSKIAQKNQVVVGLDDSFVPMGFEKKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D+D  +A+          + +  ++       L++  ID+L      T  R+   
Sbjct: 61  QLTGYDIDLAKAVFKQYG---IHVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERKK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF      + Q  ++ K  GI+S  Q+    + +Q G+T E          + K   +
Sbjct: 116 KVAFSRPYLRNRQVLVVKKDSGINSFKQMKKYELGMQTGSTAEQWYETKQNVLHAKKT-V 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233
           +++ +        A R      D            +  ++ ++  D + K   A  + +G
Sbjct: 175 LYDTISNSFLDLNAGRIQGILLDEVYANYYIAHMTKSKDYKVIQNDNVPKDLFAVGMRKG 234

Query: 234 DTEWYNIVS 242
           D      V+
Sbjct: 235 DKTLRKKVN 243


>gi|260460786|ref|ZP_05809036.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259033363|gb|EEW34624.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 260

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 91/253 (35%), Gaps = 13/253 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F        L+   FT+ S  A  L  IK  G LK  ++     F  V    +  G
Sbjct: 1   MNRVFSGIAVAALLLASTFTAVSAKADDLEKIKAAGELKISMSGQYPPFNFVNDQNEVVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD D  +A++  I    + I             L + + D +  +   T  RE    + F
Sbjct: 61  FDADIGKAIAERIGVKGTIIT---TAWDGIIAGLLANKYDTVVGSMTITPEREKV--VDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y  G+   +++   + S+ +L G ++ V  G T E    +        +    ++ 
Sbjct: 116 VGPYYHAGRAVFVNQDSKVQSLDELKGKTLGVTLGETHEKWARE-----QGGWDIRTYKG 170

Query: 179 VEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           + E+    +A R DA    +I  + A+K T ++  +            +  AI + +   
Sbjct: 171 LPELLLELKAGRVDAIVVDNIPVMVAVKETGEKVRKLDTPDIEGGSVAIGIAIRKDNPAL 230

Query: 238 YNIVSWTHYAMVT 250
              +      M+ 
Sbjct: 231 KAAMQKALDEMMA 243


>gi|331002454|ref|ZP_08325972.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410270|gb|EGG89704.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 274

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 89/270 (32%), Gaps = 24/270 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK-----------KRGFLKCGINTGLVGFAE 49
           M K + + +L  I+L   S ++  + + + K                  G +        
Sbjct: 1   MKKIYLLGVLATIMLAGCSSASTDTSIAESKLTDETSIAGTDTNTTFTVGFDQDFPPMGF 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G++ GFD+D    ++  +  +   I+Y P+    + + L S  ID +      T  
Sbjct: 61  VGDDGEFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELTSGNIDCIWNGFS-TQN 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           RE      +      + Q F++     I+S   L+G ++ VQ  ++ E  L +  +    
Sbjct: 117 RE--DKYTWTKPYMKNDQVFVVRSDSDINSFEDLAGKTVEVQTDSSAEAVLKENTELSGT 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                                 DA     S +   ++T        +L   +S    A  
Sbjct: 175 FGKLQTVADFNTGFMDLEMGGVDALAM-NSVVANYQITKRGGEGFKVLDKPLSSEEYAVG 233

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              G+T   + V          EE+     
Sbjct: 234 FKLGNTILRDEVQTAL------EEMKADGT 257


>gi|327192287|gb|EGE59252.1| extracellular solute-binding protein family 3 [Rhizobium etli
           CNPAF512]
          Length = 307

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 4/250 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L +  L  T    + S L ++  RG L  G  +    +    A+   +GFDVD    
Sbjct: 37  VMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 96

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF    Y +G
Sbjct: 97  IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 154

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++      +  + L  A   V       +       A   +     +E V+ I  A 
Sbjct: 155 VGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYESVDLIYQAL 214

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+L         P  +       +    A A+ +GD +W N V+   +
Sbjct: 215 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 272

Query: 247 AMVTAEELGI 256
             +T  E   
Sbjct: 273 EAMTGVEFDF 282


>gi|226951612|ref|ZP_03822076.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244]
 gi|226837642|gb|EEH70025.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244]
          Length = 298

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 86/239 (35%), Gaps = 8/239 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDF----CRALSSAIFDDPS 76
           + +  L  IK  G +  G     + F+ +  N    +G+  D       A+   +     
Sbjct: 25  STSGTLNKIKSSGTIVLGYRDSSIPFSYIAGNPNQPEGYAHDLQLKVVEAVKQKLNMPDL 84

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           KI+Y  + ++ R   + +  +D+   +T     R     + F    +  G   +  K  G
Sbjct: 85  KIRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFEVGSRLLTAKDSG 142

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I   + L G  +   AGTT+E  +  + +   +    I  +   E     +  R  A+  
Sbjct: 143 IKDFADLKGKKLVTTAGTTSERYIRQHQQELGIG-EIISAKDHAESFLMLQNGRAVAFMM 201

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D   L   K     P++  I+     +      + +GDT +  +V     A   + E+ 
Sbjct: 202 DDILLAGEKSKAKDPNKWDIVGTAPIQEIYGCMLRKGDTGFKQVVDDAIKATYASGEIN 260


>gi|167836674|ref|ZP_02463557.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia thailandensis MSMB43]
          Length = 271

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 11/247 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M    F + L  + L     + +A  L DIKK G L+         F  V        G 
Sbjct: 1   MKLKPFATWLIGLSLVAAHAAAHADRLDDIKKSGVLRVATFDSNPPFGFVDRKTNRIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +     +++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAQALADRLG---VRLKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+G  I    GTT E+TL + F         + ++  
Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEVTLREKFPKA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + +    IS   +   + +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGVPKGETRLVA 230

Query: 240 IVSWTHY 246
            V+ T  
Sbjct: 231 FVNDTLT 237


>gi|323526240|ref|YP_004228393.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323383242|gb|ADX55333.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 264

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 86/247 (34%), Gaps = 17/247 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K  FV+   LI   FT+ + +A  +L  +K+RG L+ G+      F     +G+  G+DV
Sbjct: 7   KKLFVA--ALIGASFTAVTAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+++ +   P    ++          LQ+ + D++      T  R+    L F P 
Sbjct: 65  DIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALDFSPA 119

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     I  K       S+  L G  + V  GT                     +   
Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGA 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   L  L   +  P       ++ S +P      + + ++  
Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGSGNPSGIPFRKNNPKFAK 232

Query: 240 IVSWTHY 246
            +     
Sbjct: 233 AIDDAMT 239


>gi|261839899|gb|ACX99664.1| hypothetical protein HPKB_1103 [Helicobacter pylori 52]
          Length = 244

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 13/236 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 18  KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 78  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 136 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E   A    +  A   D + L A       P   + +  +  K  +APAI +G  
Sbjct: 191 TETFLALLNDKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGQP 244


>gi|209519485|ref|ZP_03268280.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209500086|gb|EEA00147.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 319

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 81/235 (34%), Gaps = 7/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80
             L  I   G +  G+    + F+         G+  D        +   +     ++  
Sbjct: 49  GTLKKIHDDGVVVLGVRETSIPFSYFDGQ-RTVGYSQDIALQIVDEIRKTLGMPQLRVHE 107

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +  R   L + QID+   +T  T+ RE     AF    +      I  K  GI+  
Sbjct: 108 VTVTSSNRTPMLMNNQIDLECGSTTHTVERE--NVAAFSDSIFQYAVRMITRKNSGITDF 165

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G  +   AGT+ E  L        +    +     +E   A +  R  A+  D   
Sbjct: 166 ADLAGKPVVTTAGTSDERLLRSLNTDRQLNMRIMSARDHQEAFTAMKEGRAVAFVMDEPI 225

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +Y  K T+  P + ++    +     A    +GD     +V+       T+ +  
Sbjct: 226 VYGFKATDPHPDDFIVTGTPLGYEVYACMFRKGDEPLRALVNRVIAHSQTSGDAE 280


>gi|320324045|gb|EFW80128.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329010|gb|EFW85009.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330880666|gb|EGH14815.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 283

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L   + +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAEGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|183602357|ref|ZP_02963723.1| probable solute-binding protein for glutamate/aspartate ABC
           transporter system [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683328|ref|YP_002469711.1| solute-binding protein for glutamate/aspartate ABC transporter
           system [Bifidobacterium animalis subsp. lactis AD011]
 gi|241191289|ref|YP_002968683.1| amino acid ABC transporter periplasmic component [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241196695|ref|YP_002970250.1| amino acid ABC transporter periplasmic protein [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218276|gb|EDT88921.1| probable solute-binding protein for glutamate/aspartate ABC
           transporter system [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219620978|gb|ACL29135.1| probable solute-binding protein for glutamate/aspartate ABC
           transporter system [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249681|gb|ACS46621.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251249|gb|ACS48188.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|289177405|gb|ADC84651.1| Glutamine-binding protein [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295794282|gb|ADG33817.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 302

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 11/225 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S +  A  L +IKK G L+  + +    F  V  +G + G+D++F +AL+  +   P   
Sbjct: 48  STNAKARTLDEIKKSGELRVAVFSDKAPFGYVDKDGKYAGYDIEFAQALADGLGVKP--- 104

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y  ++   R   L S ++D+   N   T  R     + F         G +      I 
Sbjct: 105 VYTSVDPAARVDVLASNKVDVTLANFTETPERAE--KVDFSKPYMKVALGIVAPDAAPIK 162

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            V  L+G ++ V  GTT E      F+ ++ +     +++  +   A    R DA + D 
Sbjct: 163 DVKDLNGKTLIVAKGTTAETY----FEKNHPEIKLQKYDQYADAYNALLDGRGDAMSTDN 218

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           + + A           V + +I     +A A+ +G+ E  + ++ 
Sbjct: 219 TEVLAWA--KANKGYRVDVTEIGDVDVIAAAVQKGNKELLDYIND 261


>gi|158334719|ref|YP_001515891.1| extracellular solute-binding protein [Acaryochloris marina
           MBIC11017]
 gi|158304960|gb|ABW26577.1| extracellular solute-binding protein, family 3 [Acaryochloris
           marina MBIC11017]
          Length = 322

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 113/332 (34%), Gaps = 57/332 (17%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                +  L       F+   S+L  +++ G L  G +     FA     G  +G+ ++ 
Sbjct: 28  KTIAILTILFTYLGAPFAAAESVLEKVQRTGQLTAGTSQEAQPFAFADEQGQLQGYSIEM 87

Query: 64  CRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            + +   +        ++Q + +N ++R   L   ++DI+   + +T  R+    + F  
Sbjct: 88  LQLIKDQLTKELGREVQLQLVAINPEDRIPKLVQGKVDIVCDASSYTWERDK--QIDFSV 145

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                G   ++ ++        L+   I   A TT E  +         +   ++ +   
Sbjct: 146 SYGLTGTRLLVKQENAAWETPDLANKKIAALAATTNETAIRR----AQPQAQIVIVKNHG 201

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A +  + DA+  D   L A   T   PS   I+    SK  +A  + + ++++ + 
Sbjct: 202 EGYDALQQGKVDAFAADGILLDAWLQTAKNPSAFNIIG-YFSKEGIACMMPENNSKFADQ 260

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+++                              RF+                       
Sbjct: 261 VNYSL----------------------------VRFMQGYLQGKAS-------------- 278

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSK 332
                Y E FDR  G+Q+++ + +   AL  +
Sbjct: 279 -----YVETFDRWFGDQAKVPLTQDLRALVLE 305


>gi|160895520|ref|YP_001561102.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160361104|gb|ABX32717.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 293

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 7/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80
             L  ++  G +        V F+ +  NG   G  V+  +A++ A+         K+Q+
Sbjct: 23  DTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEMSQAVAEAVKKAVNRPDLKVQW 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             + ++ R   L +  ID+   +T    +R   +   F    ++ G   ++ K  GI + 
Sbjct: 82  QAVTSQNRMPLLANGTIDLECGSTTNNTVRGKEVA--FAINHFYTGTRLLVKKSSGIKNY 139

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L   ++ +  GTT    L           + ++ +   +        R  A+  D   
Sbjct: 140 ADLKDKTVAITTGTTNLQVLRKANADKAWGMNIVMAKDHADGFLLVENDRAAAFGMDDIL 199

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L+ L  T   P +  ++ D +   P A  + + D ++  +V      M+ +    
Sbjct: 200 LFGLIPTAKNPGDFEVVADSLQVEPYACMLRKDDPQFKQLVDGVIGDMMKSGAFA 254


>gi|328947349|ref|YP_004364686.1| ABC transporter periplasmic protein family 3 [Treponema
           succinifaciens DSM 2489]
 gi|328447673|gb|AEB13389.1| ABC-type transporter, periplasmic subunit family 3 [Treponema
           succinifaciens DSM 2489]
          Length = 256

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 15/245 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V+++C +++  +  S         K  G    G++           N +  G+D
Sbjct: 1   MKK--IVAVICGLVVCLSMASA------KKKSSGKFVLGLDDSFPPLGFRDKNNEIVGYD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R ++S +     ++   P++   + + L + +ID +      T  R+ ++      
Sbjct: 53  IDLAREVASRLG---LELVCQPIDWSTKEMELNTGKIDCIWNGLTLTEERKRAMAC--SE 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               + Q  ++     I S+S L G  I VQAG++ +  +             + F+   
Sbjct: 108 PYLANAQVVVVRNNGEIKSLSDLKGKKIGVQAGSSAQEAIDGAPDFKKSLKEIVEFKENV 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                      D    D+           +P   VIL + ++      A  + +    + 
Sbjct: 168 TALNDLEFGNLDGVVMDLVVAGYSITQGKKP--LVILDETLAPEEYGIAFSRKNKSLRDK 225

Query: 241 VSWTH 245
           V  T 
Sbjct: 226 VQKTL 230


>gi|307729015|ref|YP_003906239.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307583550|gb|ADN56948.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 317

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 6/234 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD- 74
              +       L  + K   +  G     V F+   A+    G+ +D    +   I  + 
Sbjct: 37  AGAAEPELTGTLLKVSKERVITIGYRDASVPFSYYDADQKPIGYSIDVAHLIIERIKTEL 96

Query: 75  ---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                +++ +P+ ++ R   LQ+  ID    +T     R  +  ++F    +      ++
Sbjct: 97  KLAELQVRTIPITSQNRISLLQNNTIDFECTSTTNNAER--AQQVSFSNSFFTIDTRLLV 154

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           ++K GI   + L   ++ V AGTT+E  L       +M    I  +   E        R 
Sbjct: 155 NRKSGIKDFADLKQKTVVVGAGTTSEKILRKMNVEKSMGMDIISAKDHTESFLMLSTGRA 214

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A   D + L   +     P ++ I+    +       + + D     I+    
Sbjct: 215 KAMMMDDALLAGERAKARNPDDYEIVGTPQTHEAYGCMLRRNDAPMKAIMDAAI 268


>gi|328956871|ref|YP_004374257.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
 gi|328673195|gb|AEB29241.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
          Length = 266

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 94/238 (39%), Gaps = 11/238 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALS 68
           +C +    +  +    I   I++   +  G+      F      + + KGFD+D  +A++
Sbjct: 17  VCFLAACGSKSAAKVDIAERIEENPTITWGVKVDTNLFGLYDIQSSEIKGFDIDIAKAIT 76

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +  D    +++ + +K R   L++  ID +      T  R+    + F  I +  GQ 
Sbjct: 77  EELTGDADNAEFVEVTSKTRIPLLKNGNIDAIIATMTITEERKE--QVNFTDIYFDAGQA 134

Query: 129 FIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            ++     I S+  L+   ++    G+T+   + +     N     +  E   E   A +
Sbjct: 135 LLVPNDSSIQSLDDLTADTTVLAVKGSTSAQNIRELSPEAN----VLELENYSEAFTALQ 190

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + + DA T D + L  +    D P  + +     ++ P   AI +G   + N V+   
Sbjct: 191 SGQGDAVTTDNAILLGIIA--DNPG-YRLAGGNFTQEPYGIAINKGQDAFLNEVNEAL 245


>gi|319948590|ref|ZP_08022716.1| glutamine-binding protein GlnH [Dietzia cinnamea P4]
 gi|319437740|gb|EFV92734.1| glutamine-binding protein GlnH [Dietzia cinnamea P4]
          Length = 359

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 12/219 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            I +RG L  G++ G   F+     +G   GFDVD  R +++ IF DP ++++  L +  
Sbjct: 110 RILQRGRLIVGLDQGSNLFSFRDPASGQLTGFDVDLAREIAADIFGDPRQVEFRSLTSAN 169

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL++ Q+D++ R+   T  R     + F    Y   Q  +  +  GI+ +  L G  
Sbjct: 170 RLEALENDQVDVVIRSMSITCAR--RERVTFSVPYYQAYQRVLTVRGSGITEIEHLEGKR 227

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV AGTT+   L     A   +   +      +   A + ++ DA T D + L  +   
Sbjct: 228 VCVAAGTTSASRL----WAELERITVLSVNTWADCLVAIQQNQVDAITTDDAILVGITAQ 283

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYN--IVSWT 244
           +       I+   +   P    I +   E     +V   
Sbjct: 284 DP---YLQIVGPQLDAEPYGVGIAKSTPENNTDGLVRQV 319


>gi|257487796|ref|ZP_05641837.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331008517|gb|EGH88573.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 283

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L   + +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFTLVNAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|120612711|ref|YP_972389.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120591175|gb|ABM34615.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 314

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 89/249 (35%), Gaps = 6/249 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
            L        + +++A +L  I   G L          FA   A G   G+ V+ C+ ++
Sbjct: 27  ALLGAASLCCAVASHAGVLERIASGGKLVVAYRDAASPFAFKDAAGRPAGYAVELCQRVA 86

Query: 69  SAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A+         +I Y+P++   R  A+     D+   ++     R     +AF    + 
Sbjct: 87  EAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGADLECGSSTNNAER--RQNVAFTIPHFI 144

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
            G   ++     I  +  + G  +    GTT    +    + H ++ + I     +    
Sbjct: 145 TGTRLLVKASSPIERIEDMGGHKLVSTRGTTALRAVQQLNREHALQINVIEAPDDQRAVE 204

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                  DA+  D   LYA       P    ++   ++   LA  + + D E+  +V   
Sbjct: 205 MVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKDDPEFKKVVDDE 264

Query: 245 HYAMVTAEE 253
              ++++ E
Sbjct: 265 MRRLISSRE 273


>gi|57242093|ref|ZP_00370033.1| amino acid ABC transporter, amino acid-binding protein
           [Campylobacter upsaliensis RM3195]
 gi|57017285|gb|EAL54066.1| amino acid ABC transporter, amino acid-binding protein
           [Campylobacter upsaliensis RM3195]
          Length = 257

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 8/225 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78
            S NA  L DIK +G L  G+   +  +A +    G+ KGF+VD  + L+  I  D +KI
Sbjct: 22  TSANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKI 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + + +NAK R   L +  +D++      T  R+      F    Y D  G ++ K+KG  
Sbjct: 82  KLVAVNAKTRGPLLDNGTLDVVIATFTITPERKKI--YNFSQPYYQDAIGLLVLKEKGYK 139

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S++ + GA I V    TT+  + +  K   +      F     I AA  A R D ++ D 
Sbjct: 140 SLADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDK 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           S L              ILPD            + D E+   +  
Sbjct: 200 SILLGYVDEKS-----EILPDSFEPQDYGIVSKKDDVEFAAFIDK 239


>gi|256375607|ref|YP_003099267.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255919910|gb|ACU35421.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 274

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 93/252 (36%), Gaps = 9/252 (3%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
               +L  TS   +   +    ++G +  G+     G    + +G+ +GFD+D  R +++
Sbjct: 12  ATAAVLALTSCGADDDTVLGRAEQGRITIGVAHDQPGLGLRRQDGNLRGFDIDVARYVAT 71

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    S I ++    ++R   L S ++D++      T  R     + F    Y  GQ  
Sbjct: 72  ELGVPESGITWVEAPPEDRERLLTSGEVDLVVNGYSITPKR--REVIDFAGPYYTAGQDL 129

Query: 130 IMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           ++       +       G  +C   GTT+   + D F  +      +   R  E   A  
Sbjct: 130 LVLIDNQEITGPDSLSRGQRLCSVTGTTSAQYVKDTFAKN---VKLVEQPRFSECVTALL 186

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           A   DA T D   L         P    ++ +  S+      + +G+ E  + V+     
Sbjct: 187 AGEVDALTTDDVVLAGYAAQ--NPELLRVVGEPFSEEEYGIGLPKGEQETKDAVTAALRK 244

Query: 248 MVTAEELGITQK 259
           MV + E    Q+
Sbjct: 245 MVDSGEWKRAQE 256


>gi|153869942|ref|ZP_01999446.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa
           sp. PS]
 gi|152073593|gb|EDN70555.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa
           sp. PS]
          Length = 110

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%)

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD +W  I+    + ++ AEELGITQ N++ +   + NP V+R LG++ S    E +GL 
Sbjct: 4   GDEQWVKIIRTILFGLINAEELGITQANVDTMM-SSDNPQVRRLLGVEGSFGQAE-IGLE 61

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            D   R +R +GNYGE+++RNLG+   + +PRG N LW+ GGL+YAPP+R
Sbjct: 62  PDAIARAVRAVGNYGEIYERNLGSG-GIGMPRGLNRLWTDGGLIYAPPLR 110


>gi|160900971|ref|YP_001566553.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160366555|gb|ABX38168.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 268

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 78/252 (30%), Gaps = 14/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFST-NASILGDIKKRG------FLKCGINTGLVGFAEVKAN 53
           M K   ++++ L  L        +AS                L  G++            
Sbjct: 1   MKKRTLLAMVALSALLAACGKNESASTAAAPVAAPVPAAMTKLVIGLDDNFPPMGFRDDK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D  R  +  +  +   + + P++   +   L  K++D L      T  R+ +
Sbjct: 61  NEIVGFDIDMAREAAKRMNVE---VDFKPIDWSAKEAELVGKRVDALWNGLTITEERKKN 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +   F      + Q  I+     I   + L+G  +  Q G++    +             
Sbjct: 118 IA--FTAPYMENHQIIIVRANSDIKDKAGLAGKVVGAQDGSSAVDAIKKDAAVAASFKDL 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F           A R DA   D   +        +  E+++L D          + + 
Sbjct: 176 KTFGDNITALMDLSAGRLDAVVVDE--VVGRFHVAKKAGEYLVLEDNFGTEDYGVGLRKE 233

Query: 234 DTEWYNIVSWTH 245
           DTE    +    
Sbjct: 234 DTEVLGKLEAAL 245


>gi|91781298|ref|YP_556505.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693958|gb|ABE37155.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 267

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 84/255 (32%), Gaps = 15/255 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   K   ++ L L  + FT+ + +A  +L  +K+ G L+ G+      F    ++G  +
Sbjct: 1   MKLSKRLLINALALSAVGFTAVAAHAEDLLDTVKQAGVLRIGLEGTYPPFDYRNSDGQLE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +   P   Q++P        ALQS + D++      T  R     L 
Sbjct: 61  GFDVDVAKAVATKLGVKP---QFIPTEWSGIIAALQSGKFDVIVNQVTITPQR--KQVLD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F     +     I          S+ +  G         T      D         +   
Sbjct: 116 FSQPYTYSAAQLIQRTDDKREFRSLDEFKGDKKLGVTLGTNY----DQMARAVPGINVQT 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E  +   A R DA   D   +    +   +           +   +     Q + 
Sbjct: 172 YPGAPEKLSDLAAKRIDATIDDR-LMLPYIIKTSQLPLRPGAVLKGADQDMGIPFRQNNP 230

Query: 236 EWYNIVSWTHYAMVT 250
           ++   +      +  
Sbjct: 231 KFAKALDDALTGLKQ 245


>gi|91224516|ref|ZP_01259778.1| hypothetical binding protein component ofABC transporter [Vibrio
           alginolyticus 12G01]
 gi|269968273|ref|ZP_06182299.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91190858|gb|EAS77125.1| hypothetical binding protein component ofABC transporter [Vibrio
           alginolyticus 12G01]
 gi|269827130|gb|EEZ81438.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 262

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 18/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +     + L  ++      IL DIK  G LK   ++G + F     NG + GFD
Sbjct: 1   MKK---LLCFAALGLAVSTTVNADPILDDIKSTGELKVCFDSGYMPFEMTAKNGQYIGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++ A+      +     +       L + +  ++      T +R  +  + F  
Sbjct: 58  IDLGKQMARAMDVKFVPVN---TSWDGIIPTLLTGKCHMIMGGMTITPMR--NTQVNFAD 112

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++    +  +SS   L+     V     TT E  +  Y     +     ++
Sbjct: 113 PYVVIGQSILVDLKHEGKVSSYRDLNSPEYVVATKLGTTGEQAVKRYLPKAKIN----LY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E   E        + DA+  D    Y      +   + + L    +  PL  A+ QG+ +
Sbjct: 169 ETQSEAVLEVANGKVDAFVYDFP--YNSIYVAENKGQLMHLAKPFTYEPLGWAVPQGNPD 226

Query: 237 WYNIVSWTH 245
             N ++   
Sbjct: 227 TLNFLNNYL 235


>gi|86152788|ref|ZP_01070993.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843673|gb|EAQ60883.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 259

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +  +   + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGVCVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  +    K   +      F  
Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236

Query: 239 NIVSW 243
             V  
Sbjct: 237 KYVDD 241


>gi|315638192|ref|ZP_07893374.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter upsaliensis JV21]
 gi|315481728|gb|EFU72350.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter upsaliensis JV21]
          Length = 262

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 8/225 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78
            S NA  L DIK +G L  G+   +  +A +    G+ KGF+VD  + L+  I  D +KI
Sbjct: 27  TSANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKI 86

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + + +NAK R   L +  +D++      T  R+      F    Y D  G ++ K+KG  
Sbjct: 87  KLVAVNAKTRGPLLDNGTLDVVIATFTITPERKKI--YNFSQPYYQDAIGLLVLKEKGYK 144

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S++ + GA I V    TT+  + +  K   +      F     I AA  A R D ++ D 
Sbjct: 145 SLADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDK 204

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           S L              ILPD            + D E+   +  
Sbjct: 205 SILLGYVDEKS-----EILPDSFEPQDYGIVSKKDDVEFAAFIDK 244


>gi|308067739|ref|YP_003869344.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Paenibacillus
           polymyxa E681]
 gi|305857018|gb|ADM68806.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Paenibacillus
           polymyxa E681]
          Length = 255

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 100/286 (34%), Gaps = 33/286 (11%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   F  ++ L+++     S         K    L  GI+           N +  GF
Sbjct: 1   MRKAAMFTMLIGLMMIVLAGCSGG-------KDDSKLIIGIDDKFAPMGFRDENNELTGF 53

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D+ +A    +     ++++ P++   +   L S +ID++      T  R+    + F 
Sbjct: 54  DIDYAKAAGEQMGK---QVEFQPIDWSAKESELNSGRIDLIWNGYTITDERKE--KVLFT 108

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                + Q  ++     +S +S L+G ++ +Q  ++    L D             F   
Sbjct: 109 KPYLKNSQVIVVPATSSLSKLSDLAGKTVGLQTLSSAADAL-DANPIKGKLKQVSEFPDN 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  +  R DA   D   + A    +     + +L + ++       + +G+ E   
Sbjct: 168 VLALTDLKTGRLDAVVIDE--VVAKYYMSKEQGTYKLLDESLAPEEYGIGVKKGNEELLT 225

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSN 284
            +                    +++ K+    ++ +++ G DK  N
Sbjct: 226 QLQSAL----------------DELHKNGKAAEISKKWFGEDKVLN 255


>gi|237800640|ref|ZP_04589101.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023499|gb|EGI03556.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 283

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L  T  +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFSLTNTGQAAQGSKLEAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPSFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|89901740|ref|YP_524211.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89346477|gb|ABD70680.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 262

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 7/248 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L+     +                +  G++             +  GFD
Sbjct: 1   MKKHVLWLMAGLMGAIVLTGCGKKEAPAAPAPAKAIVIGLDDNFPPMGFRDDKNELIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +     +      + + P++   +   L   +ID+L      T  R+    + F  
Sbjct: 61  IDLAKEAGKRLG---VAVNFKPIDWNAKEAELNGNRIDVLWNGLTITEERKA--NILFTK 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               + Q  ++ +K  I++ +QL+GA + VQ G++    +               F    
Sbjct: 116 PYLENRQIIVVTEKSPIATKAQLAGAVVGVQDGSSAVEAIQKDAATAKSIKELKKFGDNV 175

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  A R DA   D   +     T  +P E+ +L D            + DTE    
Sbjct: 176 TALMDLSAGRLDALVVDE--IVGRYYTGKKPGEYRVLEDNFGTEDYGVGTRKSDTELSAR 233

Query: 241 VSWTHYAM 248
           ++     M
Sbjct: 234 LNKALDDM 241


>gi|168492861|ref|ZP_02717004.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           CDC3059-06]
 gi|183576884|gb|EDT97412.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           CDC3059-06]
          Length = 286

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFF-TSFS-------------TNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F T+ S               A  + + KK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|254519793|ref|ZP_05131849.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA]
 gi|226913542|gb|EEH98743.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA]
          Length = 266

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 10/251 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    S+L L+ L   S       + +  ++  L  G +   V       NG++ GFD+
Sbjct: 5   KKILITSLLGLMSLALVSCG--EKKIENSMEKEELVLGFDDTFVPMGFKDKNGEYTGFDI 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +   +      I + P++   +   L +  ID +      T  R+    +AF   
Sbjct: 63  ELAKGIGEKLNKK---IIFQPIDWSMKETELNNGNIDFIWNGYSVTKERKE--KVAFSKE 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERV 179
              + Q  I      I+S  +L  A +  Q  ++    +       N       + FE  
Sbjct: 118 YLNNRQVIITLANSKINSKKELKDAVVAAQNQSSAVDAIEADGDIVNSFKDGKIVTFETN 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   L    +      ++ +L +   K   A  + + D +   
Sbjct: 178 NEALMDLEAGRVDAVVADE-ILAKYYINQRGAEKYKVLDEDFGKESYAVGMRKDDKDLVE 236

Query: 240 IVSWTHYAMVT 250
             +     +V 
Sbjct: 237 AFNNAFDELVN 247


>gi|134299236|ref|YP_001112732.1| extracellular solute-binding protein [Desulfotomaculum reducens
           MI-1]
 gi|134051936|gb|ABO49907.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 277

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 12/231 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  T  + L  IK++G +  G++           +    GFD+D    ++  +      I
Sbjct: 37  AKQTEKNTLDQIKEKGVIVAGLDDTFAPMGYRDESNKLVGFDIDMGEEMAKRLGVK---I 93

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGI 137
           Q+ P       +AL SK+ DI+      T  R+    + F      DGQ  ++ K   G 
Sbjct: 94  QWQPTQWDGIIMALDSKRFDIILSGMTVTEERKK--SINFSVPYVGDGQIMVVKKGTTGF 151

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           ++ + L G  +  QAG++ E  +              +++   E     +  R      D
Sbjct: 152 NTAADLKGKVVGTQAGSSGEEAVKKVEGIK----EVKLYKTYPEAFTDLQIGRIPVVVCD 207

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                A    + R   + I+ + I+  PLA  + + D E    +      M
Sbjct: 208 RIT--ASHYISKRADTYEIVGEKITDEPLAIGLRKSDPELKEAIDNVLNEM 256


>gi|311694310|gb|ADP97183.1| ABC transporter periplasmic amino acid-binding protein [marine
           bacterium HP15]
          Length = 272

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 98/290 (33%), Gaps = 23/290 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    + L       TS S  A  L  + +RG L CG+            N +  GFD
Sbjct: 1   MIRKL--APLVFACAAVTSVSATADQLDTVIQRGTLNCGVVLDFPPMGYFDENNEPAGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L  A+  D   +  L L   ER  +L S + D++  +T  TL R  ++G  F  
Sbjct: 59  VDYCNDLGEALGVD---VNVLNLTWGERIPSLVSGKTDVVIGSTSDTLERAKTVG--FTY 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             +      I ++ K I S   L    +    GTT E     Y +     K +   F+  
Sbjct: 114 PYFVFKFQVIANEDKNIESFDDLKNLKVGAALGTTYETEYLAYAEQQGWGKDNYTSFKSE 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        + DA     + +     + +                +     + +  W N
Sbjct: 174 NDAYLGLYQGKVDAIISTNTNIATKLRSEEFADFEAGPYVPNYDDVVGIIAKRDEVAWIN 233

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
            ++                  + Q+     N    +  G D  +++ ++L
Sbjct: 234 YLNLFL---------------VRQIRDGNMNEAYNKHFGTDAPADLIKSL 268


>gi|255994764|ref|ZP_05427899.1| amino acid ABC transporter, amino acid-binding protein [Eubacterium
           saphenum ATCC 49989]
 gi|255993477|gb|EEU03566.1| amino acid ABC transporter, amino acid-binding protein [Eubacterium
           saphenum ATCC 49989]
          Length = 277

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANG 54
           M +   V +  ++ +     +                K G L  G++             
Sbjct: 6   MKRILTVVMAIILAVSVVGLAGCKKEEEKKDGGLGNAKEGKLVVGLDDTFAPMGFRDKKN 65

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D    ++  +     ++++ P+  K + L L+SK+ID +      T  RE ++
Sbjct: 66  KLVGFDIDLATEVAKQM---KLEVEFKPIQWKAKDLELKSKKIDCVWNGMSVTPEREKAM 122

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            L        +    +    K  I S   L   +I  Q  +     L     A N     
Sbjct: 123 SL--SNKYLDNKIILMTSNNKVNIKSAKDLEKYNIGTQEDSAGLEMLKAQKNAKNFMKKV 180

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +   ++   A ++ R D    D                  I    + +   A    + 
Sbjct: 181 KEYPTYDDAINALKSGRVDVIAIDQVLGAYKNKNLKEKLA--ICKYALGQDAYAIGFRKE 238

Query: 234 DTEWYNIVSWTHYAMV 249
           DT   + V+ +  A++
Sbjct: 239 DTALRDKVNESIKAII 254


>gi|206901753|ref|YP_002250771.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Dictyoglomus thermophilum H-6-12]
 gi|206740856|gb|ACI19914.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Dictyoglomus thermophilum H-6-12]
          Length = 257

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 11/224 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  +  IKK G LK G +     F  ++ +    GFD+D  + ++ A+      +Q +  
Sbjct: 22  AGAVERIKKAGVLKVGSDVAYAPFEFMEGD-KPVGFDIDIAQEIAKALGVK---LQIINT 77

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQ 142
           +      AL++K+ DI+      T  R+    + F    Y  GQ  ++      I+S   
Sbjct: 78  SFDGIIAALKAKKFDIIISAMTITEERKK--EIDFSIPYYDSGQIIVVRSDNKDINSEKD 135

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  + VQ GTT ELT         +K     +E + E        R DA   D+    
Sbjct: 136 LKGKIVGVQLGTTGELTAKKLKDQVGIK-EIRSYETIPEAFMDLELGRLDAVINDLP--V 192

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +L  + + P     +    +      A+ + D +    ++    
Sbjct: 193 SLYYSKNNPK-LKCVGKPFTIEQYGIAVRKEDKDLLKKINEILT 235


>gi|323127385|gb|ADX24682.1| amino acid ABC transporter, extracellular amino acid-binding
           protein [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 279

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 14/268 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +   +  L  I L   +       + +       +K   +  G +   V       +G
Sbjct: 3   MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKTITLGFDNTFVPMGYKDESG 62

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           D KGFD+D  +A+          + +  +N   +   L++ +ID++      T  R+   
Sbjct: 63  DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNGKIDMIWNGYSMTKERQA-- 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171
            +AF      + Q  ++ K  GI+  S +    +  Q+G++    L  + K         
Sbjct: 118 KVAFTIPYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLVKDQ 177

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   +     + +R D    D           ++  ++ ++         A  + 
Sbjct: 178 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 237

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259
           + D      ++     M    E     +
Sbjct: 238 KEDKTLQKKINEALKKMYQDGEFQAISQ 265


>gi|317401748|gb|EFV82367.1| extracellular solute-binding protein family 3 [Achromobacter
           xylosoxidans C54]
          Length = 260

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 96/285 (33%), Gaps = 25/285 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +  LC       +  T+A  L DI KRG LK  +      F  V A+    G+D
Sbjct: 1   MNRRTLLLSLCTAATLLAAPLTHADTLDDIVKRGTLKVAVPQDFPPFGSVGADMKPLGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +      ++ +P+ +  R   LQ++++D++  +      RE    + F  
Sbjct: 61  IDTAALIAKQLGVK---LELVPVTSANRVPYLQTRKVDLVISSLGKNPEREK--AIDFSD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G        ++S + L+G +I V  G   ++ L               +E   
Sbjct: 116 AYAPFFNGVFGPADVKVASAADLAGKTIGVTRGAVEDIELTKIAP---PTATLKRYEDNN 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P +      +I  SP    + + + +    
Sbjct: 173 GTITAFLSGQVPLIATGNVVAAAILAR--NPPKKPETKFLIKDSPCYIGLNKDEPKLRAK 230

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           V+                   N     +     +++LG D   ++
Sbjct: 231 VNEIL---------------ANAKRDGSLTAISRKWLGADLPKDL 260


>gi|326793193|ref|YP_004311014.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
           5427]
 gi|326543957|gb|ADZ85816.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium
           lentocellum DSM 5427]
          Length = 293

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 79/226 (34%), Gaps = 12/226 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
              +++L        L  G++            G+  GFDVD  +A++  +      I++
Sbjct: 54  QAASNVLDK----DTLIIGLDDTFAPMGFKDEKGEIVGFDVDLAKAVAEKLGKK---IEF 106

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P++   +   L+S  ID +      T  R+  +   F      + Q  I      I++ 
Sbjct: 107 QPIDWSMKETELKSGNIDFIWNGYSITDERKEQVA--FGTPYLKNRQIIITLADSPINTK 164

Query: 141 SQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + L    +  Q G+T    +    +  A      P+ +E   ++     A R DA   D 
Sbjct: 165 ADLKDKVVGAQTGSTAVDAIETEPEVLATFKDGKPVTYETNNDVLMDLEAGRLDAVVADE 224

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             +    ++     ++ IL +   +      + + DT      +  
Sbjct: 225 -IIVKYYISKKGAEKYKILDEDFGEEEYGVGMRKEDTALVEAFNKA 269


>gi|197295090|ref|YP_002153631.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|195944569|emb|CAR57173.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 313

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 6/241 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75
           + +     L  ++  G +  G     + F+ + A     G+ ++ C+AL S+I    +  
Sbjct: 38  APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAINRS 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++P+ +  R  A+ S ++D+   +T   L R+  +   F PI +  G   ++ +  
Sbjct: 98  LTIRWVPVTSDTRIDAVVSGKVDLECGSTTSNLERQKRVA--FSPIIFVAGTKVMVKRGA 155

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L+G  + V AGTT E TL D      +     V     +  A       DA+ 
Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKTLRDLNDKFRLGIQLQVVPDHAQGFALVANGGADAFA 215

Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   LY L      +  ++ ++ D +S  P      + D +   +V  T   +    E+
Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEI 275

Query: 255 G 255
            
Sbjct: 276 A 276


>gi|331697741|ref|YP_004333980.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans
           CB1190]
 gi|326952430|gb|AEA26127.1| ABC-type transporter, periplasmic subunit family 3 [Pseudonocardia
           dioxanivorans CB1190]
          Length = 295

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 85/270 (31%), Gaps = 30/270 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----------------------ILGDIKKRGFLKC 38
           M     V  L    L  ++     S                          I++RG +  
Sbjct: 1   MKLRTLVVGLVAGALALSACGKEGSPGSEGSGVSQQVAAGVQVTGSPTFDAIQQRGRVVI 60

Query: 39  GINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           G+     G     A  G + GFD++  R +++ +     KI Y  + +  R   +   ++
Sbjct: 61  GVKDDQPGLGFKDATTGQFSGFDIEIARLVAAQLGYGADKIDYKTVPSAAREDTISRGEV 120

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTT 156
           D           R     ++F    +  GQG ++   +   +    L G  +C   G+T 
Sbjct: 121 DYYVGTYTINDNR--KQRVSFAGPYFIAGQGLLVRSDETAITGKDTLKGKKVCSVTGSTP 178

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              + D         + + F+   +      A + D  T D + L        +P +  +
Sbjct: 179 IQRVRDQ--GLTEPGNIVEFQTYTQCVDQLLAKQVDVVTTDDAILKGYASQ--QPDKLKV 234

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           + +  S  P    + + D      ++    
Sbjct: 235 VGETFSTEPYGIGLNKDDAALRAKINDILQ 264


>gi|268592306|ref|ZP_06126527.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Providencia rettgeri DSM 1131]
 gi|291312087|gb|EFE52540.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Providencia rettgeri DSM 1131]
          Length = 279

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      ++L L  L  T+   +A  L DIK+ G ++  +      F  +        G+
Sbjct: 1   MKARILTTVL-LTGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 60  DVDIAQEIADGLGVK---LELRPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + +   +    I    GT  E+TL + F         I ++  
Sbjct: 115 IPDFATGQKFIARKG-VLKTPDDIKPLRIGADKGTVQEVTLRERFPE----TKVISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237
            +  AA R     A T D + L  L         ++  I P  ++K   A A  +G+T  
Sbjct: 170 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGETRL 229

Query: 238 YNIVSWTH 245
              V+ T 
Sbjct: 230 VENVNETL 237


>gi|239941192|ref|ZP_04693129.1| putative ABC transporter solute-binding protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239987666|ref|ZP_04708330.1| putative ABC transporter solute-binding protein [Streptomyces
           roseosporus NRRL 11379]
          Length = 344

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               +   +   +  IK+RG L  G++     +      +GD +GFD+D  RA++  +  
Sbjct: 69  ASLPASGDDGPNIDKIKERGKLIAGVDQNSFRWGYRNPESGDLEGFDIDLVRAIADDLLG 128

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DP  + +  +   +R  AL++ ++D++ R       R     ++F    +  GQ  +  K
Sbjct: 129 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 186

Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183
           +  I+     L G  +C   G+T    L          D F         +      +  
Sbjct: 187 ESPITGYDSSLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTERDPDLLTVPNQLDCL 246

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +           P+  +   D  +      A  +G  +    V+ 
Sbjct: 247 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKDPFTTEYYGVATKKGSDDLVARVNK 304

Query: 244 TH 245
             
Sbjct: 305 VL 306


>gi|170748665|ref|YP_001754925.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655187|gb|ACB24242.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 301

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 11/239 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-----KANGDWKGFDVDFCRALSSAI 71
            ++       L  + +RG +  G     V F+ V       +    G+ +D C  ++  +
Sbjct: 18  ASAVEVLTGTLRSVAERGEIVLGYRESSVPFSFVEGKQPDGSPRPIGYAIDLCGEIADDV 77

Query: 72  F---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                 P KI+Y P+ A+ R  A+ S +ID+   +T     R   +   F P+ Y     
Sbjct: 78  QAAIGRPVKIRYAPVTAETRIEAVTSGKIDLECGSTTANAERRKQVA--FSPVDYISATQ 135

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++ +  GI+S   L G ++ V AGTT E  + D      +    +         A  +A
Sbjct: 136 LLVRRGSGIASYRDLGGRTVVVTAGTTNEKAVRDQLARLKINAQVVTAPDHAASYAMVKA 195

Query: 189 HRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + DA+  D   LY L  T     +++ +LPD +S  P      + D+E   +V  T  
Sbjct: 196 GKADAFATDDVLLYGLIATDAKDGADYTVLPDKLSYEPYGIMFRKDDSELAGLVQQTFT 254


>gi|148985280|ref|ZP_01818503.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP3-BS71]
 gi|147922478|gb|EDK73597.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799733|emb|CBW32298.1| putative periplasmic solute-binding transport protein
           [Streptococcus pneumoniae OXC141]
          Length = 288

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFF-TSFS-------------TNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F T+ S               A  + + KK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|241895706|ref|ZP_04783002.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
 gi|241871073|gb|EER74824.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
          Length = 277

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 8/244 (3%)

Query: 5   FFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             + +L LI  FF   S ++      +     +  G++   V       +G   G+DVD 
Sbjct: 17  LVIIVLALIGGFFWYRSVHSQDTWRQVTADKTVVIGVDDTFVPMGFRDKSGKLIGYDVDL 76

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA    I       ++ P++   +   L++  ID++         R+    +AF    +
Sbjct: 77  ARASLKKIGLKA---KFQPIDWSMKETELKTGHIDMIWNGYTINSDRKK--KVAFSNPYH 131

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEE 181
            D Q  +  K + I+ +S L G  +  Q G++  LT  +   +    +      ++  ++
Sbjct: 132 HDRQVIVTMKNQQINKLSDLKGKRLGAQTGSSGLLTYTEKGNSLRKIVGSDAQQYDTFDK 191

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                +  R +A   D             P    I+            + +GD    N V
Sbjct: 192 ALNDLQVGRLNAVLIDADYAGYYIAHEKDPEAFKIIQTNFGTDSYGVGMRKGDVTLRNKV 251

Query: 242 SWTH 245
           +   
Sbjct: 252 NEAL 255


>gi|315652085|ref|ZP_07905086.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
 gi|315485732|gb|EFU76113.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
          Length = 282

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 90/278 (32%), Gaps = 32/278 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRG--------------FLKCGIN 41
           M K + + +L  I+L   S +     ++AS    I +                    G +
Sbjct: 1   MKKIYLLGVLATIMLVGCSSAKTIESSSASTDTSIAESKLTDETSIAGTDANKTFTVGFD 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                   V  +G++ GFD+D    ++  +  +   I+Y P+    + + L S  ID + 
Sbjct: 61  QDFPPMGFVGDDGEFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELTSGNIDCIW 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  RE      +      + Q F++     I+S   L+G ++ VQ  ++ E  L 
Sbjct: 118 NGFS-TQNRE--DKYTWTKPYMKNDQVFVVRSDSDINSFVDLAGKTVEVQTDSSAEAVLK 174

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           +  +                          DA     S +   ++T        +L   +
Sbjct: 175 ENTELSGTFGKLQTVADFNTGFMDLEMGGVDALAM-NSVVANYQITKRGGKGFKVLDKPL 233

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           S    A     G+T   + V          EE+     
Sbjct: 234 SSEEYAVGFKLGNTILRDEVQTAL------EEMKADGT 265


>gi|320547237|ref|ZP_08041530.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
 gi|320448125|gb|EFW88875.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
          Length = 279

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 21/280 (7%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K        S+  L + FFT+  T A      +  I+  G LK G+   +  F    A
Sbjct: 10  MKKKICLAVLASLSLLFMSFFTASKTFADTTSEQIKKIQDAGVLKVGVKQDVPNFGYYSA 69

Query: 53  -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G ++G ++D  + ++  +      + Y  +  + R   L + QID+L      T  R+
Sbjct: 70  ESGKYEGMEIDLAKKIAKTLGVK---VAYTAVTTQTREALLDNGQIDLLIATYTITDERK 126

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF+++  KG+ ++S L G +I V  G+TT+LT+ +Y KAHN+K+
Sbjct: 127 ASYAI--SNPYYYDEIGFLVNTGKGLKTISDLDGKTIGVAQGSTTKLTIEEYGKAHNLKF 184

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +      E+  +  A R DA++ D S L              I+ +  +      A  
Sbjct: 185 KFVQLGSFPELAISLHAKRIDAFSVDKSILTGYVSKKT-----TIINEGFNTQEYGIAAK 239

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269
           + + E  + V+           L     + N+     +  
Sbjct: 240 KSNQEVIDYVNSLLDDWKADGSLQKLYDKYNLKPAKAENN 279


>gi|239620790|ref|ZP_04663821.1| ABC-type amino acid transport/signal transduction system
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|239516366|gb|EEQ56233.1| ABC-type amino acid transport/signal transduction system
           [Bifidobacterium longum subsp. infantis CCUG 52486]
          Length = 300

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +S +  A  L +IKK G +K  + +    F  V  +G ++G+DV F   L+  +  +P
Sbjct: 45  TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 104

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
               Y  ++   R   L S ++D++  N   T  R+    + F         G +  +  
Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 159

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VSQL G ++ +  GTT E     +F+ +        +++  +   A    R DA++
Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A           V +  +     +APA+ +GDTE  N V+ 
Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGDTELLNFVND 261


>gi|51244843|ref|YP_064727.1| glutamine ABC transporter, periplasmic substrate binding protein
           [Desulfotalea psychrophila LSv54]
 gi|50875880|emb|CAG35720.1| probable glutamine ABC transporter, periplasmic substrate binding
           protein [Desulfotalea psychrophila LSv54]
          Length = 284

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 19/252 (7%)

Query: 4   DFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
              ++++  +++   +F+ +     +S L  I K G L+ G+N     F      G   G
Sbjct: 16  KLCIAMVLTMVMSTCAFAADINLSKSSSLNTIVKNGELRIGLNASYPPFEMTNKQGRLIG 75

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+  + ++ ++      ++++ ++      AL S + D++      T  R  +L +AF
Sbjct: 76  FDVELGKEIAKSMGVK---VKFVNMDFDGLIPALLSDKFDLIISGMTLTQQR--NLKIAF 130

Query: 119 RPITYFDGQGFI--MHKKKGISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPI 174
                  GQG +  M K+K I     L+   + + +  GTT E     Y      K    
Sbjct: 131 SNPYVLMGQGIMVNMSKEKDIRLYRNLNKPEMKIVSCIGTTGEEAARKYLPKAQYK---- 186

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F++  +      + R DA+  D+  L  L+          +L +  +  P+A    QGD
Sbjct: 187 SFDQPSDSAQEVISGRADAFVYDLHVLEVLQKRMGGDKTF-LLKEPFTFEPMAIGFKQGD 245

Query: 235 TEWYNIVSWTHY 246
            +  N ++   +
Sbjct: 246 PDLTNFINNFLF 257


>gi|224372628|ref|YP_002607000.1| binding component of abc transporter [Nautilia profundicola AmH]
 gi|223589307|gb|ACM93043.1| binding component of abc transporter [Nautilia profundicola AmH]
          Length = 266

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 96/250 (38%), Gaps = 16/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   ++I+ L  + F +       S L  I ++G L+  +  G V F     +G   G
Sbjct: 1   MKK-LLIAIIALASMLFAADFNVWKNSTLHSIVQKGELRVCLEPGYVPFEMRDKHGRIIG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + ++  +      ++ +P        AL + + DI+      T  R  +L + F
Sbjct: 60  FDVDISKKMAKDMGVK---LKLVPTAWDGIIPALITGKCDIIISGMTITQQR--NLKVMF 114

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIV 175
               +  GQ   +  K  G+ S   L   G  I  + GTT E+     FK          
Sbjct: 115 ANPYFLVGQTLLVNKKHAGVKSYKDLDKKGIVITTKLGTTGEIAARKLFK----HATIKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+           +R DA+  D      L +      + + L + ++  PL  AI  GD 
Sbjct: 171 FDSESAAVQEVLNNRADAFIYDKP-YNELFMAGKGKGKLIFLKEDLTYEPLGFAINHGDP 229

Query: 236 EWYNIVSWTH 245
           ++ N ++   
Sbjct: 230 DFLNWLNNFL 239


>gi|23464704|ref|NP_695307.1| solute-binding protein for glutamate/aspartate ABC transporter
           system [Bifidobacterium longum NCC2705]
 gi|189438957|ref|YP_001954038.1| amino acid ABC transporter periplasmic protein [Bifidobacterium
           longum DJO10A]
 gi|322689597|ref|YP_004209331.1| amino acid ABC transporter substrate-binding protein
           [Bifidobacterium longum subsp. infantis 157F]
 gi|23325269|gb|AAN23943.1| probable solute-binding protein for glutamate/aspartate ABC
           transporter system [Bifidobacterium longum NCC2705]
 gi|189427392|gb|ACD97540.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium longum DJO10A]
 gi|291516166|emb|CBK69782.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|320460933|dbj|BAJ71553.1| amino acid ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis 157F]
          Length = 300

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +S +  A  L +IKK G +K  + +    F  V  +G ++G+DV F   L+  +  +P
Sbjct: 45  TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 104

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
               Y  ++   R   L S ++D++  N   T  R+    + F         G +  +  
Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 159

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VSQL G ++ +  GTT E     +F+ +        +++  +   A    R DA++
Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A           V +  +     +APA+ +G+TE  N V+ 
Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNTELLNFVND 261


>gi|251782499|ref|YP_002996801.1| amino acid ABC transporter extracellular-binding protein
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242391128|dbj|BAH81587.1| amino acid ABC transporter extracellular-binding protein precursor
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
          Length = 280

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 14/268 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +   +  L  I L   +       + +       +K   +  G +   V       +G
Sbjct: 4   MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKTITLGFDNTFVPMGYKDESG 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           D KGFD+D  +A+          + +  +N   +   L++ +ID++      T  R+   
Sbjct: 64  DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNGKIDMIWNGYSMTKERQA-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171
            +AF      + Q  ++ K  GI+  S +    +  Q+G++    L  + K         
Sbjct: 119 KVAFTIPYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLVKDQ 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   +     + +R D    D           ++  ++ ++         A  + 
Sbjct: 179 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 238

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259
           + D      ++     M    E     +
Sbjct: 239 KEDKTLQKKINEALKKMYQDGEFQAISQ 266


>gi|116628190|ref|YP_820809.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|116101467|gb|ABJ66613.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
 gi|312278805|gb|ADQ63462.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           ND03]
          Length = 264

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K F  ++  L+ +   +  +       IK+   L   ++     F     V       
Sbjct: 1   MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+   +A+++ +      ++   ++      +LQS + D+       T  R+ +    
Sbjct: 61  GSDIKLAQAIANELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K      SS+  L G  + VQ GT  E       K        I 
Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDALKGKKVAVQKGTIEEGLAKKQLK----DSTVIS 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              + E     ++ + DA   +          N       +   +      A A+ +G+ 
Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLVLASVALKVDDGDAKAVAMAKGND 231

Query: 236 EWYNIVSWTHY 246
           +    V+    
Sbjct: 232 KLKEAVNKVIK 242


>gi|319791018|ref|YP_004152658.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315593481|gb|ADU34547.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 302

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 4/240 (1%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDP 75
               +     L  IK  G +  G+       A +   G  + G+ V+ C  +   I  + 
Sbjct: 23  TAQQAPTGGTLDKIKASGKVVLGVREASPPMAYMLGAGEKYVGYHVELCERVLKDITPNA 82

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++Y+ + A+     +Q+  +DI    T     R     +AF   TY            
Sbjct: 83  -KLEYMAVTAQNTIPLVQNGTLDIGCGPTTNNTAR--QQQVAFALTTYVSEVRMATRVDS 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI+++ QL+G ++    GTT    L    +A N+ Y+ ++ +   E      + R DA+ 
Sbjct: 140 GITTLDQLAGRNVSASTGTTAVQLLRKRERAQNVSYNTMLGKDHLESFLLMESGRADAFV 199

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D + L  +   +  P+ + I+ D +   P+A    + D  +   V  +   ++ + EL 
Sbjct: 200 LDDNLLAGIIANSKNPAAYRIVGDALGSEPIALLFRKDDPAFKTAVDESLRKLMKSGELE 259


>gi|256829597|ref|YP_003158325.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
 gi|256578773|gb|ACU89909.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
          Length = 273

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 14/229 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S L +I KRG L+ G++ G + F      G+  GFDVD  + ++ A+      +  +
Sbjct: 29  AQKSTLNEILKRGELRVGLDAGYMPFEMTDKKGEIVGFDVDMAKEMAKAMGVK---LTIV 85

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
             +      AL + + DI+         R  +L + F       GQ  +++KK    I+S
Sbjct: 86  NTDYDGIIPALMADKFDIIISGMTVNQER--NLQINFADPYIVVGQAILLNKKHEGAITS 143

Query: 140 VSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              L+     V +   TT E            K     FE+  +        + DA+  D
Sbjct: 144 YKDLNDPKFTVVSRIGTTGEQAAKRMIPKAQYK----SFEKESDGAMEVVNGQADAFVYD 199

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +                V+L    +  PL   + +GD ++ N +     
Sbjct: 200 LPFNVVFMAQ-QGGKNLVLLDKPFTYEPLGFGVKKGDPDFLNWLDNFLT 247


>gi|302024082|ref|ZP_07249293.1| glutamine-binding protein precursor [Streptococcus suis 05HAS68]
          Length = 270

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 19/256 (7%)

Query: 4   DFFVSILCLIILF--------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54
              V  L LI+            +  TN+  +  I  RG L+ G+   +  F     + G
Sbjct: 4   RLLVCALILIVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTG 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +++G ++D  R ++  +  D   I++ P+ A+ R   L + Q+D++      T  R+  L
Sbjct: 64  EFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNGQVDMVIATFTITEERK--L 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    Y D  GF+++K  GI + + L G +I V  G+ T   ++     + +  +  
Sbjct: 119 LYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISKLADKYGISVNFA 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+  + RAHR DA++ D S L     +     +        S S         +
Sbjct: 179 ELGSYPELSVSLRAHRTDAFSVDQSILSGYISSKSELMDF-----SFSASDYGIVTKLSN 233

Query: 235 TEWYNIVSWTHYAMVT 250
            +  N ++        
Sbjct: 234 KDLNNYLNSLVEKWTA 249


>gi|227511321|ref|ZP_03941370.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227523527|ref|ZP_03953576.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227085474|gb|EEI20786.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227089292|gb|EEI24604.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 282

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 24/259 (9%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGF 47
           M K +       VS+L  ++L  +    +             IKK+G ++  +   L  +
Sbjct: 1   MKKHWLTKLIAVVSVLATLLLVLSGCGNSKKSSSNNPSSVSQIKKKGTIRVAVFGDLPPY 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             V  +G   G+DV     ++  +      ++++ +NA  R  AL S ++D++  N   T
Sbjct: 61  GWVNKDGKRVGYDVKLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFTVT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R     ++F         G +  K K I+ VSQL   ++ V  GTT E    +YF + 
Sbjct: 118 PER--KQVVSFAKPYMKVSVGVVSPKNKPITKVSQLQNKNVIVTKGTTAE----NYFTSK 171

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + F+   +   A +  R  A   D S LYA   +       V +  I  KS +A
Sbjct: 172 QPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKSNSKYTVGIKSIGPKSYIA 229

Query: 228 PAIIQGDTEWYNIVSWTHY 246
           PA+ +G+    N  +    
Sbjct: 230 PAVKKGNESLLNWTNKEIT 248


>gi|223984171|ref|ZP_03634321.1| hypothetical protein HOLDEFILI_01614 [Holdemania filiformis DSM
           12042]
 gi|223963867|gb|EEF68229.1| hypothetical protein HOLDEFILI_01614 [Holdemania filiformis DSM
           12042]
          Length = 267

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 88/254 (34%), Gaps = 13/254 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M      + ++ L ++  T   + A         ++ +G L  GI+           N +
Sbjct: 3   MKIGKLGMGLIGLALVAMTGCQSAAKPQEDSWSALEAKGKLVVGIDDTFAPMGFRDENNE 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D++  +A+S  +     + ++  ++   +   L +  ID++      T  R     
Sbjct: 63  LTGYDIEMAKAVSEKLG---LEFEFQTIDWSMKESELNAGNIDLIWNGYSITDTR--RQQ 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHP 173
           +AF      + Q  I      +S+ + L+G +I VQ  ++    ++      +      P
Sbjct: 118 VAFSEPYLENRQLIITLADSAVSTKADLAGKTIAVQKESSALEAVSADTALTSTLKNGAP 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F+   +      A R  A   D        +      ++ +L +       A  + + 
Sbjct: 178 EEFDTNIDCFMDLEAGRSQAIVVDEVL-ARYVMKQRGQEKYKVLDENFGTEQYAVGMRKQ 236

Query: 234 DTEWYNIVSWTHYA 247
           DT     ++    A
Sbjct: 237 DTTLLEKINEAMKA 250


>gi|88855455|ref|ZP_01130119.1| putative glutamate transporter glutamate-binding protein [marine
           actinobacterium PHSC20C1]
 gi|88815362|gb|EAR25220.1| putative glutamate transporter glutamate-binding protein [marine
           actinobacterium PHSC20C1]
          Length = 289

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 99/292 (33%), Gaps = 25/292 (8%)

Query: 2   YKDFFVSILCLI-ILFFTSFST---------------NASILGDIKKRGFLKCGINTGLV 45
            K   +S +  + IL  ++ +                  + +  +   G +  G      
Sbjct: 4   KKGLMISAIAAVGILGLSACAADTGTTNPDVVVPEFEAGTTMASLADAGKITIGTKFDQP 63

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F     +G+  GFDV+  + +++++      I+++   +  R   +++  +DI+     
Sbjct: 64  LFGLKGPSGEPVGFDVEMGKIIAASLGISEDNIEWVETVSANRETFIENGTVDIVIATYT 123

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
               R+  +  A            +    +GI+    L+G  +C  AG+T+E  +A+   
Sbjct: 124 INDKRKEVISFAGPYYNAGQDILVLEGNPEGITGPEDLAGKDVCSVAGSTSEKNIAE--- 180

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                 + I  +         R+    A T D   L  L        E  +L +  ++ P
Sbjct: 181 ---YGVNLITTDTYSNCLEPLRSGTVVAVTTDNVILAGLADQ--NAGEFEVLSNPFTEEP 235

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKNINQVSKDTTNPDVQRF 276
               +   D  + + ++                +    +V K  T P V R+
Sbjct: 236 YGIGLGHDDDAFRDYINDVLEGSYDDGSWDSAWEATAGKVLKLPTPPAVDRY 287


>gi|257056747|ref|YP_003134579.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017]
 gi|256586619|gb|ACU97752.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017]
          Length = 304

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 85/229 (37%), Gaps = 8/229 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +     +KK G +  G+             +G++ GFDV+  R +S+ +  DP KI+Y  
Sbjct: 55  SPTFDQMKKTGHVVVGVKDDQPNLGYKDPTSGEYSGFDVEIARLISAKLGFDPKKIEYKA 114

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141
           + +  R  A+ +  +            R     ++F    +  GQG ++ K    I    
Sbjct: 115 VPSAGREQAIINGDVHYYVGTYTINDKR--KQQISFAGPYFVAGQGLLVAKDNEDIKGKD 172

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  +C  +G+T    + D  +      + +  +   +  +     + D  T D + L
Sbjct: 173 DLKGKKVCSVSGSTPIQNVRD--EGLTEPENIVELQTYSQCVSELLNGQVDVVTTDDAIL 230

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                   +P E  ++ +  ++ P    + + D    + V+      + 
Sbjct: 231 LGYAAQ--QPDELKVVGEPFTEEPYGVGLPKEDDALRDKVNDILEEAME 277


>gi|209547535|ref|YP_002279453.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538779|gb|ACI58713.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 279

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 94/250 (37%), Gaps = 4/250 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L    L  T    + S L ++  RG L  G  +    +    A+   +GFDVD    
Sbjct: 9   VMSLAAAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF    Y +G
Sbjct: 69  IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++         + L  A           +       A         ++ V+ I  A 
Sbjct: 127 VGLMLKADGKYGDYAALKAAGSSATISVLQNVYAETMVHAALPDATVDQYDSVDLIYQAL 186

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+L         P  +       +    A A+ +GD +W N V+   +
Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244

Query: 247 AMVTAEELGI 256
             +T  E   
Sbjct: 245 EAMTGVEFDF 254


>gi|300783210|ref|YP_003763501.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299792724|gb|ADJ43099.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 276

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 94/267 (35%), Gaps = 13/267 (4%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M  +    S+L L+       +  +     +        L  GI     G +E   +G +
Sbjct: 1   MRWRTLLGSVLLLVTASACGPAKVSPTDSLVTRASATDHLTIGIRFDAPGLSEHTVDGRF 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD    ++S +      I +    +  R   L S  +D++  +   T  R     +
Sbjct: 61  VGFDVDVATFVASELGVSAKDITWRETTSATRETDLTSGAVDLVVASYSITDKR--KQVV 118

Query: 117 AFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +F    +  GQ  ++ +    I+    L+G  +C   G+T    + D +         + 
Sbjct: 119 SFAGPYFTTGQDLLVRRTSADIAGPEALNGRRLCSVTGSTPAQQVKDKYAQA---VQLVE 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           + R  +   A  A + DA T D   L         P    I+    SK      + + DT
Sbjct: 176 YPRYSDCVTALLAGQIDAVTTDAVILAGYVAR--DPELLKIVGKPFSKESYGVGLRKDDT 233

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN 262
           +    V      M+++ E  +   N N
Sbjct: 234 QGVAAVDDAIRKMISSGEW-LRSLNAN 259


>gi|152984549|ref|YP_001348446.1| putative ABC transporter binding protein subunit [Pseudomonas
           aeruginosa PA7]
 gi|150959707|gb|ABR81732.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PA7]
          Length = 268

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K   +  +  + L   S    A  L DI+K G L+         F  V A     +G 
Sbjct: 1   MKK---LPAITALALALVSGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +     ++Q LP N   R   L + ++D++  N   T  R  +  + F 
Sbjct: 58  DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   ++S   L+   + V  GT  E  L + F         I ++  
Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R  +  A T D   L  L        ++ + P  IS   +   I +G+     
Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227

Query: 240 IVSWTH 245
            V  + 
Sbjct: 228 FVDKSL 233


>gi|295398550|ref|ZP_06808583.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
 gi|294973214|gb|EFG49008.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
          Length = 271

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 114/296 (38%), Gaps = 34/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVK-AN 53
           M K + +  L       T+ +++A+   DI +R        +  G+      F +   A 
Sbjct: 1   MKKLWRIVALVAFAFLATACTSSAASQQDIAERIDSEAYPVITWGVKVDTNLFGKYNIAE 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
              +GFD+D  + +++ +  + ++ +++ + +K R   L++  +D L      T   +  
Sbjct: 61  NRIEGFDIDMAKEITNRVGGENAEAEFVEVTSKTRIPLLKNGNVDALIATMTITE--DRL 118

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYH 172
             + F  + +  GQ  ++ +   I  V  L+   ++    G+T+   + +     N    
Sbjct: 119 KQVDFSQVYFDAGQALMVPEDSDIEGVESLTSEHTVLAVKGSTSAQRIKEAAPDAN---- 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E   E   A ++ + D  T D + L  +   N     + I     +  P   AI +
Sbjct: 175 VLELENYAEAFTALKSGQGDTMTTDNAILLGIMEQNPG---YKIAGSTFTNEPYGIAINK 231

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSNIGE 287
           G   + N V+                  I+ +  D T  ++  ++ G D  S+I E
Sbjct: 232 GQDAFLNEVNQA----------------IDDMVADGTYQEIYAKWFGDDTESSIAE 271


>gi|302866037|ref|YP_003834674.1| family 3 extracellular solute-binding protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315502596|ref|YP_004081483.1| extracellular solute-binding protein family 3 [Micromonospora sp.
           L5]
 gi|302568896|gb|ADL45098.1| extracellular solute-binding protein family 3 [Micromonospora
           aurantiaca ATCC 27029]
 gi|315409215|gb|ADU07332.1| extracellular solute-binding protein family 3 [Micromonospora sp.
           L5]
          Length = 311

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 84/233 (36%), Gaps = 7/233 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +    +     IK  G +  G+           A G   GFD++  + ++S +  DP+KI
Sbjct: 58  ANVAGSPAFEKIKSAGKVVIGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPAKI 117

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137
           +Y  + +  R  A++  +ID        T  R     ++F    +  GQ  ++ K    I
Sbjct: 118 EYKEIASANRETAIKGGEIDYYVGTYSITDKR--KNDVSFAGPYFVAGQDLLVRKDESSI 175

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +    L G  +C   G+T    + D         + + F+   E  +     + DA T D
Sbjct: 176 TGKDTLKGKKVCSATGSTPIQKIRDEGLTEG--ENIVEFKTYSECVSQLLDKKVDAVTTD 233

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            + L         P E  ++    S       + + D    + V+    A  T
Sbjct: 234 DAILKGYAAQ--NPDELKVVGQPFSTEKYGIGLPKDDKALRDYVNDQIEAAFT 284


>gi|227508309|ref|ZP_03938358.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227192198|gb|EEI72265.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 282

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 24/259 (9%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGF 47
           M K +       VS+L  ++L  +    +             IKK+G ++  +   L  +
Sbjct: 1   MKKHWLTKLIAVVSVLATLLLVLSGCGNSKKSSSNNPSSVSQIKKKGTIRVAVFGDLPPY 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             V  +G   G+DV     ++  +      ++++ +NA  R  AL S ++D++  N   T
Sbjct: 61  GWVNKDGKRVGYDVKLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFTVT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R     ++F         G +  K K I+ VSQL   ++ V  GTT E    +YF + 
Sbjct: 118 PER--KQVVSFAKPYMKVSVGVVSPKNKPITKVSQLQNKNVIVTKGTTAE----NYFTSK 171

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + F+   +   A +  R  A   D S LYA   +       V +  I  KS +A
Sbjct: 172 QPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKSNSKYTVGIKSIGPKSYIA 229

Query: 228 PAIIQGDTEWYNIVSWTHY 246
           PA+ +G+    N  +    
Sbjct: 230 PAVKKGNKSLLNWTNKEIT 248


>gi|253689675|ref|YP_003018865.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756253|gb|ACT14329.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 268

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 99/265 (37%), Gaps = 17/265 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++   +L   + S  A  L DI+KRG L+  +      F  V  +   +G+D+
Sbjct: 8   IKKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F   
Sbjct: 68  DIARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   ++S   L G SI V  G   ++ L D             +E    
Sbjct: 123 YAPFFLGVFGPKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKA---AQIKRYEDNNT 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + + +        + A+      P++  +   ++  SP    + + +      V
Sbjct: 180 TLSAYLSGQVEYVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKV 237

Query: 242 SWTHYAMVTAEELGITQKNINQVSK 266
                      E  +    +N +S+
Sbjct: 238 DALI-------EQALKDDTLNSLSE 255


>gi|28869961|ref|NP_792580.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967002|ref|ZP_03395152.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301385186|ref|ZP_07233604.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302062754|ref|ZP_07254295.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302130127|ref|ZP_07256117.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28853206|gb|AAO56275.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213928324|gb|EEB61869.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|330965316|gb|EGH65576.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|331014305|gb|EGH94361.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 283

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L  T  +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFSLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|307701962|ref|ZP_07638970.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus mitis NCTC 12261]
 gi|307616607|gb|EFN95796.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus mitis NCTC 12261]
          Length = 279

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 13/250 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           K   + ++ L+ LF T+ +  AS          +++G +  G +   V     + NG + 
Sbjct: 4   KKIALVLVSLLTLFLTACTQKASDPKKDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +      +Q+ P++   +   LQ+  ID +      T  R     +A
Sbjct: 64  GFDIDLAQAVSEKLGVK---VQFQPIDWDMKETELQNGTIDAIWNGYAATDER--REKVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K + I SV  +   ++  QAG++  L      D  K         
Sbjct: 119 FSIPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++   E     +  R DA   D         +    S++ +          A  +   D
Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILSDYNVFSAGFESESFAVGVRPAD 238

Query: 235 TEWYNIVSWT 244
                 ++  
Sbjct: 239 KRLLQALNQA 248


>gi|312897774|ref|ZP_07757190.1| bacterial extracellular solute-binding protein, family 3
           [Megasphaera micronuciformis F0359]
 gi|310621158|gb|EFQ04702.1| bacterial extracellular solute-binding protein, family 3
           [Megasphaera micronuciformis F0359]
          Length = 265

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 89/247 (36%), Gaps = 9/247 (3%)

Query: 1   MYKDFFVS-ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    + I+ +  +  T   ++++     K    +  G++           +G+  G 
Sbjct: 3   MKKWILAATIMTMTAMLATGCGSDSAKSEQ-KLPDKVIIGLDDNFPPMGFRDESGNLVGS 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +  +  +  +   +++ P++   +  AL+SKQ+D+L      T  R+  +   F 
Sbjct: 62  DIDLAKEAAKRLGIE---VEFKPIDWDSKEAALKSKQVDMLWNGLSITEDRKKEIA--FS 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                +GQ  ++     ++  + L+G ++  Q G+++   L           +  ++   
Sbjct: 117 DAYMKNGQIIVVRSDSPVTDRAGLAGKTLATQDGSSSIDCLNKAADFKASLGNVKLYGDN 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R DA   D S          +     ++   + +      + Q DT   +
Sbjct: 177 VAALMDLELGRVDAVLVDSS--VGRYYMQKKQGVFKVIDKNMGEEEFGVGMRQEDTLLRD 234

Query: 240 IVSWTHY 246
            ++    
Sbjct: 235 KLNSVLK 241


>gi|253681643|ref|ZP_04862440.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium botulinum D str. 1873]
 gi|253561355|gb|EES90807.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium botulinum D str. 1873]
          Length = 268

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 87/253 (34%), Gaps = 18/253 (7%)

Query: 1   MYKDF---FVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K      ++ + L++L   S     S   + L  +KK G L+ G++            
Sbjct: 1   MKKIISCVLITTIGLMLLAGCSSLGKQSGEDNSLKCVKKLGKLRIGLDDSYPPMEFRDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D    ++  +      ++++        L LQSK+ D +      T  R+  
Sbjct: 61  NNLVGFDIDLSNEIAKRLGVK---VEFVTTEFSGILLGLQSKKFDAIIAGFSITEDRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
             + F       GQ   + K    I  +S L    +  Q G+  +       K       
Sbjct: 117 -SVNFSEPYILGGQVIAVKKGNTSIKKLSDLKDKIVGCQMGSNGQHCAEKNLKEIK---E 172

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              + ++ +  +     R DA   D  A       +    E  +L +++ K P+  A   
Sbjct: 173 LRKYSKIPQAFSDMAIGRIDAVIMD--AQVGGYYLSKNTGEFEVLNEMVVKQPMGIAFKM 230

Query: 233 GDTEWYNIVSWTH 245
           GD    N V    
Sbjct: 231 GDNSLKNEVQKII 243


>gi|186682192|ref|YP_001865388.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464644|gb|ACC80445.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme
           PCC 73102]
          Length = 322

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
               + +I  LI+         A   +  + + G L  G +   + FA   + G   G+ 
Sbjct: 23  KSKIYSAIFGLILSVSLPGVAGAETVMQKVARTGVLTAGTSRDALPFAYSDSQGKLIGYS 82

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           VD    +   +        +++ + +   ER   + ++Q+DI+   + +T  R+    + 
Sbjct: 83  VDMLTLIQKQLEKELGKKIQLKLVGVTPAERIPKIINRQVDIICDASSFTWERDK--KID 140

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F       G   ++ K   + S   L    + V AGTT E T+         +   + F+
Sbjct: 141 FSVSYGVTGTQILIKKDSNLGSPESLINKRVGVLAGTTNEETIKQV----QTQAKLVYFK 196

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236
              E  AA    + DA+  D   L     T        I P    S+  +A  + + +++
Sbjct: 197 TRAEGFAALEQGKIDAFASDSIILEGWLQTAKNQDSFAIAPPRPYSREGIACMVPENNSK 256

Query: 237 WYNIVSWTH 245
           + + V+++ 
Sbjct: 257 FLDSVNYSL 265


>gi|55823397|ref|YP_141838.1| amino acid (glutamine) ABC transporter substrate-binding protein
           [Streptococcus thermophilus CNRZ1066]
 gi|55739382|gb|AAV63023.1| amino acid (glutamine) ABC transporter substrate-binding protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 264

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K F  ++  L+ +   +  +       IK+   L   ++     F     V       
Sbjct: 1   MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+   +A+++ +      ++   ++      +LQS + D+       T  R+ +    
Sbjct: 61  GSDIKLAQAIANELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115

Query: 118 FRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K  +   SS+  L G  + VQ GT  E       K        I 
Sbjct: 116 FSDPYYETQNAIIVRKGQESTYSSLDALKGKKVAVQKGTIEEGLAKKQLK----DSTVIS 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              + E     ++ + DA   +          N   +   +   +      A A+ +G+ 
Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLTLASVALKVDDGDAKAVAMTKGND 231

Query: 236 EWYNIVSWTHY 246
           +    V+    
Sbjct: 232 KLKEAVNKVIK 242


>gi|107101631|ref|ZP_01365549.1| hypothetical protein PaerPA_01002675 [Pseudomonas aeruginosa PACS2]
          Length = 268

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K   +  +  + L   S    A  L DI+K G L+         F  V A     +G 
Sbjct: 1   MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +     ++Q LP N   R   L + ++D++  N   T  R  +  + F 
Sbjct: 58  DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   ++S   L+   + V  GT  E  L + F         I ++  
Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R  +  A T D   L  L        ++ + P  IS   +   I +G+     
Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKSLTE 227

Query: 240 IVSWTH 245
            V  + 
Sbjct: 228 FVDKSL 233


>gi|154148664|ref|YP_001406796.1| amino acid [Campylobacter hominis ATCC BAA-381]
 gi|153804673|gb|ABS51680.1| amino acid [Campylobacter hominis ATCC BAA-381]
          Length = 268

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 19/206 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGF 59
           M K   V  +C   LF          L  IK++G  + G+      F   V   G ++GF
Sbjct: 1   MKKIILVLGICFCALF-------GDSLDQIKQKGVFRVGVYESQPPFEKFVD--GKFEGF 51

Query: 60  DVDFCRALSSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           ++D   +++  +F  +   ++++ + AK+R  ALQ  +ID +  N   T  R     + F
Sbjct: 52  EIDLANSIAKDLFGENGGTVEFVIITAKDRIPALQQNKIDAVIANYTVTDERAK--SVDF 109

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +    G +  K   I+S  +L    I  + GTTTE  L          +       
Sbjct: 110 TMPYFAVNTGILTRKNDNITSPLELRDTPIICEKGTTTEEYLQ------KNDFKIEYCNS 163

Query: 179 VEEIDAAYRAHRCDAYTGDISALYAL 204
             E     R  +  AY  D   + A 
Sbjct: 164 AVECYKMVRDGKAKAYAADNIVVLAY 189


>gi|148926602|ref|ZP_01810284.1| probable ABC-type amino-acid transporter periplasmic solute-binding
           protein [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845296|gb|EDK22390.1| probable ABC-type amino-acid transporter periplasmic solute-binding
           protein [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 264

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 9   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 68

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+  I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 69  FEVDVAKLLAKNILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 126

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y D  G ++ K+K   S++ + GA+I V    TT+  +    K   +      F  
Sbjct: 127 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPD 186

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I AA  A R DA++ D S L              ILPD            + D  + 
Sbjct: 187 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 241

Query: 239 NIVSW 243
             V  
Sbjct: 242 KYVDD 246


>gi|291288059|ref|YP_003504875.1| extracellular solute-binding protein family 3 [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290885219|gb|ADD68919.1| extracellular solute-binding protein family 3 [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 270

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 88/251 (35%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K     ++  +       + N+    S L  + KRG L+ G+  G + F      G+ 
Sbjct: 1   MKKIVVTLLVFAMACVTAFANDNSLWEKSTLNQVLKRGELRVGMEAGYMPFELKNKKGEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  + L+  +      +  +         +L + + DI+      T  R  +L +
Sbjct: 61  IGFDVDMAKELAKEMGVK---LTLVNTAWDGIISSLLTDKYDIIMSGMTITPQR--NLQV 115

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F       GQ  ++ K+    I S   L+     V          A   K +       
Sbjct: 116 NFADPYIVVGQTILIRKELAGKIKSYKDLNDPKYTVATKLGVTGDYA--TKKYIGNAKIN 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +FE  +E        + DA+  D+   Y              L    +  PLA AI +GD
Sbjct: 174 LFETEQEGAMEVVNGKADAFVYDLP--YNSLYFAQNSKNLAFLNVPFTYEPLAWAIRKGD 231

Query: 235 TEWYNIVSWTH 245
            ++ N ++   
Sbjct: 232 PDFMNFLNNIL 242


>gi|170749962|ref|YP_001756222.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656484|gb|ACB25539.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 301

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 79/226 (34%), Gaps = 7/226 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80
             L  I     L  G+      F+ +  N    GF VD C  ++ A+  +      ++  
Sbjct: 24  GTLKKIHDNNRLVLGVRDTATPFSYLDQNQKVVGFAVDICLRIADAVKRELKMPGLEVGM 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             +N+  R   + +  +D+    T     R+    + F    +     F+  K + I+ +
Sbjct: 84  EFVNSSSRIPLMTNGTVDLECGTTTNNAERKK--QVDFTNTHFLTATRFVSRKDQHIAGL 141

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++   AG+T  L L        +    I  + V E        R  A+  D   
Sbjct: 142 DDLRGKTVSSVAGSTNILMLIKANNERKLGITVIAAKDVPEGFLMVETGRAAAFVMDDVQ 201

Query: 201 LYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTH 245
           L  +   +  P+ +V+  +   +  P    + + D  +  +V    
Sbjct: 202 LSVIAAQSKEPAAYVVSEETLSNPEPYGIMLRKDDPAFKAVVDRAT 247


>gi|225352764|ref|ZP_03743787.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156371|gb|EEG69940.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 275

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 91/251 (36%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +      +F  S              G ++ GI     G      +G + GFD
Sbjct: 6   MLRRVIATFCACACVFAVSACGADD------ADGKIRVGIKFDQPGLGFK-KSGTYVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +     +I +    +K+R   LQ+  +D +      T  R+    ++F  
Sbjct: 59  VDVAKYIAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAG 116

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  GQ  ++ K    I+    L+G  +C   G+T+ +T+ + F     +   +     
Sbjct: 117 PYFVAGQDLLVRKDETSINGPEDLNGKRLCSVTGSTSAVTVKEKFA---NEVQLMEQPGY 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +   DA T D   L  L   +       ++    ++      I +GDT+   
Sbjct: 174 AECATALFSGIVDAVTTDDIILAGLASASR--GRLRVVGKPFTQEYYGVGIKKGDTKLAT 231

Query: 240 IVSWTHYAMVT 250
            ++     M+ 
Sbjct: 232 QINNAIADMIQ 242


>gi|256375586|ref|YP_003099246.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255919889|gb|ACU35400.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 295

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 84/243 (34%), Gaps = 15/243 (6%)

Query: 16  FFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
              S +  A            +K RG +  G+           A    + GFDVD  R +
Sbjct: 31  AAPSQAAEADVKVDGSTTFEKMKSRGKVVIGVKEDQPNLGFKDATTNKYSGFDVDIARLV 90

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +  D SKI+Y  + +  R  AL +  +D           R+    +AF    +  GQ
Sbjct: 91  AAKLGFDESKIEYKAIASAGREQALINGDVDYYVGTYTINDGRKE--KIAFAGPYFVAGQ 148

Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             ++ K     +    L G  +C   G+T    + D  +      +   F+   +  +  
Sbjct: 149 DLLVRKDDASITGKDTLMGKKVCSVTGSTPIKRIKD--EKLTEDANITEFQNYSQCVSKL 206

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                DA T D + L         P +  ++    SK P    + + D    + V+    
Sbjct: 207 AEGAVDAVTTDDAILKGYAAQ--EPDKFKVVGAPFSKEPYGIGLNKEDKPLRDKVNDILQ 264

Query: 247 AMV 249
           A +
Sbjct: 265 AAM 267


>gi|256380783|ref|YP_003104443.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255925086|gb|ACU40597.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 275

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 10/257 (3%)

Query: 2   YKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           Y+   ++I    +L  T+   S + S L      G L  GI   L G ++ + +G++ GF
Sbjct: 3   YRKLVMAITGSAVLAATAACGSADQSTLEGKADDGALTIGIRYDLPGMSQRRIDGEFVGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + +++     P+ I +  +   +R   + S ++D++  N   T  R+  +G  F 
Sbjct: 63  DVDVAKYVAAQFDVQPAGITWREVRPADREKLIASGEVDLVVANYSITEPRKQQVG--FA 120

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +  GQG ++   +  I+    LSG  +C   GTT+   + + F         + + +
Sbjct: 121 GPYFQTGQGLLVRATEEAITGTEALSGKKLCSVTGTTSAAKVKEEFAQ---DVELVEYGQ 177

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +   A  A + DA T D + L         P    ++ +  +       + + D    
Sbjct: 178 YSDCVTALLAEKVDAVTTDEAILTGFVGQ--NPELLKLVGEPFTTERYGIGLAKDDAAGR 235

Query: 239 NIVSWTHYAMVTAEELG 255
             V+     MV+  E  
Sbjct: 236 GKVASAIEKMVSTGEWK 252


>gi|49082882|gb|AAT50841.1| PA2204 [synthetic construct]
          Length = 269

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K   +  +  + L   S    A  L DI+K G L+         F  V A     +G 
Sbjct: 1   MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +     ++Q LP N   R   L + ++D++  N   T  R  +  + F 
Sbjct: 58  DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   ++S   L+   + V  GT  E  L + F         I ++  
Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R  +  A T D   L  L        ++ + P  IS   +   I +G+     
Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227

Query: 240 IVSWTH 245
            V  + 
Sbjct: 228 FVDKSL 233


>gi|15597400|ref|NP_250894.1| binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|218891843|ref|YP_002440710.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254235230|ref|ZP_04928553.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719]
 gi|254240626|ref|ZP_04933948.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192]
 gi|296389383|ref|ZP_06878858.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAb1]
 gi|313110962|ref|ZP_07796802.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
 gi|9948227|gb|AAG05592.1|AE004647_1 probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|126167161|gb|EAZ52672.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719]
 gi|126194004|gb|EAZ58067.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192]
 gi|218772069|emb|CAW27848.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|310883304|gb|EFQ41898.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
          Length = 268

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K   +  +  + L   S    A  L DI+K G L+         F  V A     +G 
Sbjct: 1   MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +     ++Q LP N   R   L + ++D++  N   T  R  +  + F 
Sbjct: 58  DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI+ K   ++S   L+   + V  GT  E  L + F         I ++  
Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R  +  A T D   L  L        ++ + P  IS   +   I +G+     
Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227

Query: 240 IVSWTH 245
            V  + 
Sbjct: 228 FVDKSL 233


>gi|227355083|ref|ZP_03839494.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Proteus mirabilis ATCC 29906]
 gi|227164870|gb|EEI49717.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Proteus mirabilis ATCC 29906]
          Length = 279

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 108/328 (32%), Gaps = 66/328 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L    + F+     A  L DIK+ G ++  I      F  +        G+
Sbjct: 1   MKLRVLATALIAGSVLFSGL-AKADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTKKLAGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D    ++  +      ++  P N   R   L +K++D+++ N   T  R     + F 
Sbjct: 60  DADIANEIAKDLGVK---LELRPTNPANRIPLLNAKKVDLIAANFTITEERAK--QVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   ++S  Q++   I    GT  E+TL + +         I ++  
Sbjct: 115 VPYFATGQKFIARKG-VLTSPEQIASLRIGADKGTVQEITLRERYPE----TKVISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          +  I P  I++   A A  +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRL 229

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
            N ++ T                                            L L K+   
Sbjct: 230 INEINNTL-------------------------------------------LRLEKE--- 243

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
                 G   E+++R  G  ++   PRG
Sbjct: 244 ------GKADEIYNRWFGPDTKSAQPRG 265


>gi|186471953|ref|YP_001863271.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184198262|gb|ACC76225.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 262

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 99/314 (31%), Gaps = 63/314 (20%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSA 70
           + ++   S +  A  L DIKK G L+         F  V        G DVD+ RA+++ 
Sbjct: 1   MGLMLAISSAVRADRLDDIKKAGVLRVATFDSNPPFGFVDPKSNQIVGLDVDYARAVANK 60

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +      ++  P N   R   L+S ++D++  N   T  R+    + F    +  G  FI
Sbjct: 61  LGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDERKK--EVDFSTPYFASGTQFI 115

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             K   + +  QL+   I    GTT E  +   F         + ++      AA R   
Sbjct: 116 AKKG-VLKTPQQLNSLRIGADKGTTNEQQVRAQFP----GATIVAYDDTPFAFAALRTGN 170

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               T D   L AL         + I    IS       + +G+T   N+V  T      
Sbjct: 171 VQVITQDGPKLVALLANVPDKGSYEISAFTISNDYEGVGVPKGETRLLNLVDDTLRG--- 227

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
                                                            +   G  G+++
Sbjct: 228 -------------------------------------------------LEANGTAGKIY 238

Query: 311 DRNLGNQSELKIPR 324
           D   G  S   +PR
Sbjct: 239 DAWFGPASRAPLPR 252


>gi|27379495|ref|NP_771024.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27352647|dbj|BAC49649.1| bll4384 [Bradyrhizobium japonicum USDA 110]
          Length = 302

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 7/226 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQY 80
             L  IK+ G +  G+    V F+ +       G+ +D C      + + +  D   +  
Sbjct: 25  GTLKKIKETGAITLGVRDSAVPFSYIDEKQKTVGYAIDICMKIVEEIKAELKLDKLAVNE 84

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             + +  R   + +  ID+   +T      +    + F    +     F+  K   +  V
Sbjct: 85  NLVTSSNRIPLMANGTIDLECGSTTNNA--DRQKQVWFTNTHFLTASRFVSKKASKLDQV 142

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++   AGTT    L     A  +  + +  + V E        R +A+  D   
Sbjct: 143 DDLKGKAVVSVAGTTNITQLNKANAARALGINVMNAKDVPEAFLMVETDRAEAFVMDDIQ 202

Query: 201 LYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTH 245
           L A+  +   PS + I         P    + + D ++  +V    
Sbjct: 203 LAAMIASAKDPSLYAISSGAFSDPEPYGIMLRKDDAQFKAVVDRAT 248


>gi|322516343|ref|ZP_08069269.1| polar amino acid uptake family ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus vestibularis
           ATCC 49124]
 gi|322125181|gb|EFX96570.1| polar amino acid uptake family ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus vestibularis
           ATCC 49124]
          Length = 264

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K F  ++  L  +   +  +       IK+   L   ++     F     V       
Sbjct: 1   MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+   +A++  +      ++   ++      +LQS + D+       T  R+ +    
Sbjct: 61  GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTAERKKT--FD 115

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K       S+    G  + VQ GT  E       K        + 
Sbjct: 116 FSDPYYETQNAIIVRKDQESTYPSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              + E     ++ + DA   +          N   +   +   +      A A+ +G+ 
Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVDDGDAKAVAMAKGND 231

Query: 236 EWYNIVSWTHY 246
           +    V+    
Sbjct: 232 KLKEAVNKVIK 242


>gi|291444634|ref|ZP_06584024.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998]
 gi|291347581|gb|EFE74485.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998]
          Length = 332

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               +   +   +  IK+RG L  G++     +      +GD +GFD+D  RA++  +  
Sbjct: 57  ASLPASGDDGPNIDKIKERGKLIAGVDQNSFRWGYRNPESGDLEGFDIDLVRAIADDLLG 116

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DP  + +  +   +R  AL++ ++D++ R       R     ++F    +  GQ  +  K
Sbjct: 117 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 174

Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183
           +  I+     L G  +C   G+T    L          D F         +      +  
Sbjct: 175 ESPITGYDSSLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTERDPDLLTVPNQLDCL 234

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +           P+  +   D  +      A  +G  +    V+ 
Sbjct: 235 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKDPFTTEYYGVATKKGSDDLVARVNK 292

Query: 244 TH 245
             
Sbjct: 293 VL 294


>gi|256847116|ref|ZP_05552562.1| ABC transporter solute-binding component [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715780|gb|EEU30755.1| ABC transporter solute-binding component [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 284

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 104/260 (40%), Gaps = 25/260 (9%)

Query: 1   MY---KDFFVSILCLIIL-----------FFTSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M    K      L  I +              + ++N S +  IKKRG LK  +   L  
Sbjct: 1   MKFNWKKLIAGALATISIAALAATAAVRPTTVNAASNPSSVSAIKKRGVLKVAVFGDLPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +  V  +G   G+DV   R ++  +      ++++ +NA  R   L S + DI+  N   
Sbjct: 61  YGWVNKDGKRVGYDVALARQMAKDLGVK---VKFVQVNANNRVDTLNSNKADIVLANFTV 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F         G +  KKK I+ VSQL G  + V  GTT E    +YF +
Sbjct: 118 TSERK--QVVDFAKPYMKVSVGVVSPKKKAITKVSQLKGKKVIVTKGTTAE----NYFTS 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + F+   +   A + +R  A   D S LYA     + P   V +  I  K  +
Sbjct: 172 KQKGVSLLKFDSKTQQFNALKNNRGAALADDNSYLYAW--VKNNPKYTVGIKSIGPKQYI 229

Query: 227 APAIIQGDTEWYNIVSWTHY 246
           APA+ +G+    N  +    
Sbjct: 230 APAVKKGNKSLLNWSNQEIT 249


>gi|46190617|ref|ZP_00121269.2| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bifidobacterium longum
           DJO10A]
          Length = 280

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +S +  A  L +IKK G +K  + +    F  V  +G ++G+DV F   L+  +  +P
Sbjct: 25  TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 84

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
               Y  ++   R   L S ++D++  N   T  R+    + F         G +  +  
Sbjct: 85  E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VSQL G ++ +  GTT E     +F+ +        +++  +   A    R DA++
Sbjct: 140 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 195

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A           V +  +     +APA+ +G+TE  N V+ 
Sbjct: 196 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNTELLNFVND 241


>gi|218516825|ref|ZP_03513665.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
          Length = 279

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 6/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   F   ++ L+     S       S L ++  RG L  G  +    +    A+   +G
Sbjct: 1   MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD    ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF
Sbjct: 61  FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y +G G ++      +  + L  A           +       A   +     +E 
Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYES 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           V+ I  A  + R DA   D S+L         P  +       +    A A+ +GD +W 
Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236

Query: 239 NIVSWTHYAMVTAEELGI 256
           N V+   +  +T  E   
Sbjct: 237 NFVNTALHEAMTGVEFDF 254


>gi|197286727|ref|YP_002152599.1| amino acid ABC transporter substrate-binding protein [Proteus
           mirabilis HI4320]
 gi|194684214|emb|CAR45712.1| putative amino acid ABC transporter, substrate-binding protein
           [Proteus mirabilis HI4320]
          Length = 279

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 108/328 (32%), Gaps = 66/328 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L    + F+     A  L DIK+ G ++  I      F  +        G+
Sbjct: 1   MKLRVLATALIAGSVLFSGL-AKADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTKKLAGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D    ++  +      ++  P N   R   L +K++D+++ N   T  R     + F 
Sbjct: 60  DADIANEIAKDLGVK---LELRPTNPANRIPLLSAKKVDLIAANFTITEERAK--QVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   ++S  Q++   I    GT  E+TL + +         I ++  
Sbjct: 115 VPYFATGQKFIARKG-VLTSPEQIASLRIGADKGTVQEITLRERYPE----TKVISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          +  I P  I++   A A  +G+   
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRL 229

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
            N ++ T                                            L L K+   
Sbjct: 230 INEINNTL-------------------------------------------LRLEKE--- 243

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
                 G   E+++R  G  ++   PRG
Sbjct: 244 ------GKADEIYNRWFGPDTKSAQPRG 265


>gi|326318774|ref|YP_004236446.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375610|gb|ADX47879.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 296

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 90/248 (36%), Gaps = 6/248 (2%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L  +     + +++A +L  I   G L          FA   A G   G+ V+ C+ ++ 
Sbjct: 10  LLGVASLCCAVASHAGVLDRIASGGKLVVAYRDAASPFAFKDAGGRPAGYAVELCQRIAD 69

Query: 70  AI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+         ++ YLP++   R  A+   + D+   +T     R     +AF    +  
Sbjct: 70  AVRRKTGRKDMEVAYLPVDLDNRMEAITQGRADLECGSTTNNAER--RQIVAFTIPHFIT 127

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   ++     I  +  + G  +    GTT    +    +   ++ + I     +     
Sbjct: 128 GTRLLVKASSPIDRIEDMGGHKLVSTRGTTALRAVQQLNRERALQINVIEAPDDQRAVDM 187

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 DA+  D   LYA       P    ++   ++   LA  + +GD E+  +V    
Sbjct: 188 VEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKGDPEFKKVVDDEM 247

Query: 246 YAMVTAEE 253
             ++T  E
Sbjct: 248 RRLITTRE 255


>gi|90413901|ref|ZP_01221887.1| hypothetical binding protein component of ABC transporter
           [Photobacterium profundum 3TCK]
 gi|90325085|gb|EAS41595.1| hypothetical binding protein component of ABC transporter
           [Photobacterium profundum 3TCK]
          Length = 265

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  + ++  ++  T   IL DI K G L+   + G + F     NG + GFD
Sbjct: 1   MRKLLSGIVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +      I             L + +  +++        R  ++ + F  
Sbjct: 61  IDIGKQMARQMGVKYVPIN---TAWDGIIPTLLTGKCHMINAGMTINAQR--NMRVNFAD 115

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                GQ  +++ +    I+S   L+    +I  + GTT E  +        +     VF
Sbjct: 116 PYIVIGQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKAKLN----VF 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E   +        + DA+  D+         ND    H  L    +  PL  AI QGD++
Sbjct: 172 ETQSDAVLEVANGKADAFIYDMPFNAIYASQNDGKVIH--LEQPFTYEPLGWAIAQGDSD 229

Query: 237 WYNIVSWTH 245
             N ++   
Sbjct: 230 MLNFLNNFL 238


>gi|303240910|ref|ZP_07327421.1| extracellular solute-binding protein family 3 [Acetivibrio
           cellulolyticus CD2]
 gi|302591496|gb|EFL61233.1| extracellular solute-binding protein family 3 [Acetivibrio
           cellulolyticus CD2]
          Length = 275

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 81/231 (35%), Gaps = 7/231 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            S S        +K+ G L  G++           N +  G+D+D  + ++S +  +   
Sbjct: 29  ASSSVADQSWEKVKEAGVLVLGLDDSFPPMGYRDDNNEIVGYDIDLAKEVASRLGVE--- 85

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++  P+N   +   L +  ID +      T   ++   L F      + Q  ++      
Sbjct: 86  LKLQPINWDSKEQELNTGNIDCVWNGFTMTD--DLKKNLLFSDAYMNNQQVLVVMADSKY 143

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S + L+G S+ +Q+ ++ ++ L             I  +              DA   D
Sbjct: 144 NSEADLAGKSVALQSDSSAKVALDSKTDFKASLKEVIELDNYTTCLMDLEKGGVDAVVMD 203

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              + A      + S++ ++ + ++         + D      ++ T   M
Sbjct: 204 E--IVARYFIQMKGSKYKVIGNSLAAEEYGIGFRKADVALKTKINDTLKEM 252


>gi|242240518|ref|YP_002988699.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242132575|gb|ACS86877.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 278

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 19/260 (7%)

Query: 4   DFFVSILCLIILFFTS--------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
               S+L L++L   +         +   S L ++ +RG L+ G       F     NG 
Sbjct: 11  KVIASVLALLVLSGCTPTEEKKETSAAPQSALQNVLQRGTLRVGDCLSFAPFGFYDKNGA 70

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  +AL+ A+      ++ +   +  R   LQ+ ++D++  N    L R   +G
Sbjct: 71  PDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG 127

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F        +  ++ K  GI S   ++G +I    G+T      D  +   +      
Sbjct: 128 --FTNPYVVASEAMLVRKNSGIQSAHDMAGKTIATVKGSTN----GDDVRNLGIDVKIQE 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  +    A +  + DA   D + L         P+  V    ++     A  + QGD 
Sbjct: 182 YDSSQAAILAIKQGQADAMVEDNNFLAYQASL--DPTLIVTNEALVPLEYNAFGVKQGDQ 239

Query: 236 EWYNIVSWTHYAMVTAEELG 255
            W + ++   + +  + E  
Sbjct: 240 VWTHYLNEFLFEINASGENA 259


>gi|312863928|ref|ZP_07724166.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|311101464|gb|EFQ59669.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
          Length = 264

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K F  ++  L  +   +  +       IK+   L   ++     F     V       
Sbjct: 1   MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+   +A++  +      ++   ++      +LQ+ + DI       T  R+ +    
Sbjct: 61  GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQAGKADIAISGISVTDERKKT--FD 115

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K      SS+    G  + VQ GT  E       K        + 
Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              + E     ++ + DA   +          N   +   +   +      A A+ +G+ 
Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVNDGDAKAVAMAKGND 231

Query: 236 EWYNIVSWTHY 246
           +    V+    
Sbjct: 232 KLKEAVNKVIK 242


>gi|329667258|gb|AEB93206.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           DPC 6026]
          Length = 284

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 38/296 (12%)

Query: 1   MYKDFFV-------SILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44
           M K  F+        IL +  +  T+ S N+S          +  IKKRG LK  +   L
Sbjct: 1   MKKRKFIKKLIAAVGILAVGAVTLTACSNNSSSSSSSNNPSSVAAIKKRGTLKVAVFGDL 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             +  V  +G   G+DV   R L+  +      ++++ +NA  R   L + + DI+  N 
Sbjct: 61  PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K K I++V+QL G  + V  GTT E    +YF
Sbjct: 118 TVTPERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            +       + F+   +   A +  R  A   D S LYA     + P   V +  +   S
Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
            +APA+ +G+    +  +             I + N +    +  N +++ + G D
Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------HINKLNKDGFFINDYNQELKPYFGDD 274


>gi|126659454|ref|ZP_01730588.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110]
 gi|126619290|gb|EAZ90025.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110]
          Length = 299

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 10/236 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS 76
            S    IL  IK+ G +  G     + FA +   G+W G+ +D    +   I      P 
Sbjct: 21  ASWAGEILEKIKETGVITAGTRKDAIPFAYINDEGEWVGYSIDVLEIIRQDIEKKLGKPI 80

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           +++ + +  + RF  +++++IDI   ++ +T  RE    + F    +  G      K   
Sbjct: 81  QLKLVEVTPQNRFDKVKNREIDIECASSTFTWEREEM--VDFSVSYFASGTKIFRKKGSD 138

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           + ++  L+G  I V   TT E  +     A       +  +   E          +A  G
Sbjct: 139 LGTIDSLAGRRIGVIPNTTNEQAIKIQQPAA----ILVPIKDRNEGLEKLNNGEIEAIAG 194

Query: 197 DISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           D   L  L+L N    +  ++P+        A  I + ++ W  +V+++    +  
Sbjct: 195 DGIVLQGLRLENGNADKFEVVPEFPYMYEAYACMIPEDESAWRGMVNYSLVKFMEG 250


>gi|46578802|ref|YP_009610.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603591|ref|YP_967991.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|46448214|gb|AAS94869.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563820|gb|ABM29564.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232665|gb|ADP85519.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 249

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 84/244 (34%), Gaps = 18/244 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F  +++  ++L F S +          +      GI+     FA V  +G   GFD
Sbjct: 1   MKRSFVYTVVMALVLAFASVAAA--------EEKTYINGIDANYPPFAYVDKDGKPAGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +++ +     K+ + P++      +L +K+ID++      T  R+    + F  
Sbjct: 53  VDSMNWIAAKMG---FKVVHKPMDWDGIVPSLLAKKIDMVCSGMSITDARKK--QITFSE 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q F+  K   +S      G   + VQ GT+    L          +    ++  
Sbjct: 108 PYWTVSQVFVAKKDSKLSVDDVYKGKKKLGVQRGTSEADALQKQAPEKGWNFELRFYDSA 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R DA    +  L A      +P    IL           A    DTE   
Sbjct: 168 PLAIEDVLNGRIDA--AGMDILPAEDAAAKKPV--KILGTFGEPEDFGVATRNEDTELRG 223

Query: 240 IVSW 243
            ++ 
Sbjct: 224 KINE 227


>gi|307706788|ref|ZP_07643593.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307617873|gb|EFN97035.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 279

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 90/250 (36%), Gaps = 13/250 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           K   + ++  + LF T+ +              +++G +  G +   V     + NG + 
Sbjct: 4   KKIALVLVSFLTLFLTACTQKVSDPKQDNWNKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +     K+Q+ P++   +   LQ+  ID++      T  R     +A
Sbjct: 64  GFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDVIWNGYSATDER--REKVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K + I SV  +   ++  QAG++  L      D  K         
Sbjct: 119 FSIPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++   E     +  R DA   D         +    +++ + P        A  +   D
Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFPAGFESESFAVGVRPAD 238

Query: 235 TEWYNIVSWT 244
                 ++  
Sbjct: 239 KRLLQALNQA 248


>gi|213691643|ref|YP_002322229.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|213523104|gb|ACJ51851.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|320457730|dbj|BAJ68351.1| amino acid ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 300

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +  +  A  L +IKK G +K  + +    F  V  +G ++G+DV F   L+  +   P
Sbjct: 45  TSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKP 104

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
               Y  ++   R   L S ++D++  N   T  R+    + F         G +  +  
Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTEERKE--KVDFAKPYMKVALGVVSPQNA 159

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ V QL G ++ +  GTT E     +F+ +        +++  +   A    R DA++
Sbjct: 160 PITDVGQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A           V +  +     +APA+ +G+ E  + V+ 
Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNKELLDFVND 261


>gi|220909135|ref|YP_002484446.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219865746|gb|ACL46085.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 300

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 111/290 (38%), Gaps = 19/290 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + +   ++L     +   S+L  + K G L  G +     FA   + G+  G+ V+
Sbjct: 4   KFACLGLATFLLLSCPGLAQAHSVLEKVVKSGVLTAGTSKDAFPFAYRDSQGNLTGYSVE 63

Query: 63  FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             + ++  +    + P K++ + L+ +ER   LQ   +DI+   + +T  RE    + F 
Sbjct: 64  MLKLINEQVSKELNQPIKLELVALDPQERIAKLQQGAVDIVCDFSSFTWKREA--DVDFS 121

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 G   ++ +   +S  + L G  I V  GTT ++ L    +    +   ++F+  
Sbjct: 122 VSYAITGTRLLVKRNSPLSDPASLVGKRIGVLPGTTAQVAL----RKAQPQAQIVLFQDR 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +A + DA+  D   L              +     S   +A  + + ++ + +
Sbjct: 178 NKAYQAIQAGQIDAFADDDVLLEDWLFRTKNDKTFQVASYPYSNEGVACMLPENNSTFRD 237

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
            V+++    +    L     N++            R+ G    + +   L
Sbjct: 238 TVNYSLIRFMQGL-LTQKTPNVDLF---------DRWFGPQGIAPLTVDL 277


>gi|293602769|ref|ZP_06685209.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
 gi|292818785|gb|EFF77826.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
          Length = 260

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 88/248 (35%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +  LC       +  T+A  L DI K G +K  +      F  V ++    G+D
Sbjct: 1   MNRRTLLLSLCTAASLLAAPLTHADTLDDIVKAGVIKIAVPQDFPPFGSVGSDMKPLGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +      ++ +P+ +  R   LQ++++D++  +      RE    + F  
Sbjct: 61  IDTAALIAKQLGVK---LELVPVTSANRVPYLQTRKVDLVISSLGKNAEREK--AIDFSD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G        +SS + L+G +I V  G   ++ L+    A         +E   
Sbjct: 116 AYAPFFNGVFGPADLKVSSAADLAGKTIGVTRGAVEDIELSKIAPA---SATLKRYEDNN 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P +      +I  SP    + + + +    
Sbjct: 173 GTITAFLSGQVPMIATGNVVAAAILAR--NPPKKPETKFLIKNSPCYIGMNKDEPKLRAK 230

Query: 241 VSWTHYAM 248
           V+    A 
Sbjct: 231 VNDILAAA 238


>gi|228477200|ref|ZP_04061838.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus salivarius SK126]
 gi|228251219|gb|EEK10390.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus salivarius SK126]
          Length = 270

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 17/253 (6%)

Query: 1   MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   + +  +  L    + S++ + L  +K +G L   +N     F          
Sbjct: 1   MKPWKKLLLGLASVFALTALAACSSSTNTLDKVKDKGTLTVALNPHFAPFEFKTIQDGKD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D++  +A++  +      +++  ++      ++QS + DI       T  R+   
Sbjct: 61  TIVGADIEIAKAIADELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y      ++ K            +  S+ VQ G+  E       KA+    +
Sbjct: 117 -FDFSDTYYESETVLVVKKDATGTYKQTGDFAKKSVAVQKGSIQESI----AKANLSDAN 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +   +  E     ++ + +    + +        N   +   I     SK   A A+ +
Sbjct: 172 VVSLAQPGEAINELKSGQVEGVVLEKAIAQGYVDQNSDLAVSDITLKSDSKDAYAVAMPK 231

Query: 233 GDTEWYNIVSWTH 245
           G  +    V+   
Sbjct: 232 GSDKLKAKVNKVI 244


>gi|33601773|ref|NP_889333.1| putative amino acid ABC transporter solute-binding protein
           [Bordetella bronchiseptica RB50]
 gi|33576210|emb|CAE33289.1| putative amino acid ABC transporter solute-binding protein
           [Bordetella bronchiseptica RB50]
          Length = 263

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 9/252 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58
           M K   V +     L       + +            +  G++             +  G
Sbjct: 1   MKKITAVLLFSATALLSACGQGDDASSTASAPAASRKVVVGLDDNFPPMGFRDEKNELVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  +  S  +     ++++ P++   +   L  K++D+L      T  R+    ++F
Sbjct: 61  FDIDMAKEASRRLG---MQVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NISF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 + Q  I+     I + + L+G  +  Q G++    +               F  
Sbjct: 116 TAPYMANHQIIIVGSASPIKTKADLAGKVVGAQEGSSAVDAIKKDAPVAASLKEIKTFAD 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                    A R DA   D   +    L + R  ++ +L +          + + DTE  
Sbjct: 176 NVTALMDLAAGRLDAIVVDE--VVGRYLASKREGQYRVLEENFGTEDYGVGVRKDDTELL 233

Query: 239 NIVSWTHYAMVT 250
             +  T  +M  
Sbjct: 234 AKLDKTLASMKE 245


>gi|227113607|ref|ZP_03827263.1| putative amino acid ABC transporter, substrate binding protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 268

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 10/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++   +L   + S  A  L DI+KRG L+  +      F  V  +   +G+D+
Sbjct: 8   IKKGLLAVMGAAMLLIQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F   
Sbjct: 68  DIARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   ++S   L G SI V  G   ++ L D             +E    
Sbjct: 123 YAPFFLGVFGPKDSTLTSSEALEGKSIGVTRGAVEDMVLTDIAPKA---AQIKRYEDNNT 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + + +        + A+      P++  +   ++  SP    + + +      V
Sbjct: 180 TLSAYLSGQVEYVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKV 237

Query: 242 SWTH 245
               
Sbjct: 238 DALI 241


>gi|332108376|gb|EGJ09600.1| extracellular solute-binding protein family 3 [Rubrivivax
           benzoatilyticus JA2]
          Length = 300

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 89/254 (35%), Gaps = 7/254 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              I  L      S  T    L  IK    +  G+      F+ +  N    G+ VD C 
Sbjct: 9   LAVITLLAACGVASAQTPGDTLSRIKSTKTITLGVREAARPFSFLDENKRPVGYSVDLCL 68

Query: 66  A----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           A    L   +     ++QY  ++  ER   L +++ID+   +T  T  R     +AF   
Sbjct: 69  AAVDELKRELKLPELQVQYKVVSGAERIPKLLAREIDLECGSTTNTKAR--QEQVAFSYT 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +      +  K   ++++  L G  + +  GTT+E  L        +     VF    E
Sbjct: 127 MFVAQMRVLTPKDTPVTTLKDLDGLPLALSKGTTSEK-LFTRLAETEVNLKLQVFPSNTE 185

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA +A +  A+  D + L  L   +    +  +    +S  P      + D      V
Sbjct: 186 AYAALKAGKVRAFAQDDALLQGLASADGAADKFQLSTLALSVEPYGVMARKDDKALLAAV 245

Query: 242 SWTHYAMVTAEELG 255
             T   +  + E  
Sbjct: 246 DRTLGRLYASGEAD 259


>gi|324997390|ref|ZP_08118502.1| putative glutamate binding protein [Pseudonocardia sp. P1]
          Length = 295

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 86/228 (37%), Gaps = 10/228 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +     +++RG +  G+     G     A  G++ GFD+D  + ++  +   P +I +  
Sbjct: 48  SPTFQAMQQRGRVVVGVKDDQPGLGFRDATTGEFSGFDIDVAKTVAGGLGFAPDQIDWKV 107

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141
           + +  R   ++  ++D           R+  +G  F    Y  GQG ++      I+   
Sbjct: 108 VPSAAREDVIERGEVDYYVGTYTINDKRKQRVG--FAGPYYTAGQGLLVRADENEITGPQ 165

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G ++C   G+T    + D     N+    + F+   +        + DA T D + L
Sbjct: 166 TLQGKTVCSVTGSTPIQRVRD----QNLTTSIVEFQTYTQCVDQLINGQVDAVTTDDAIL 221

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                    P +  ++ +  S+ P    +   DT +   V+      +
Sbjct: 222 LGYASQ--NPEQLKVVGETFSEEPYGIGVPLNDTAFRTKVNDLLQTAI 267


>gi|227893075|ref|ZP_04010880.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus ultunensis DSM 16047]
 gi|227865126|gb|EEJ72547.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus ultunensis DSM 16047]
          Length = 273

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 92/250 (36%), Gaps = 14/250 (5%)

Query: 2   YKDFFVS---ILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56
            K  F+S   I+ L  +           +   +K+   +  G+      F  +   +G  
Sbjct: 3   KKKLFLSTFFIILLSFMLTACSQNKKQTIYETVKENKTINWGVKADTPLFGSMSIKSGKV 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D   AL+  I    +K  ++   A  +   L+++ +D +      T  R+    +
Sbjct: 63  NGFEIDLANALTHKILGKDAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKK--QV 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  GQ  ++     I +   L+   + V  GTT+    AD  K  + K   + +
Sbjct: 121 DFSKPYFPAGQSVMVSDHSKIKNAKDLNKQKVLVVKGTTS----ADAVKKVSPKAEILQY 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +  AA +A++ +A   D   L            + ++    +  P   A+ +G + 
Sbjct: 177 DDYGQAFAALKANQGNALVTDNGILAG---ILRDNPGYRVVGGTFTNQPYGIAVDKGQST 233

Query: 237 WYNIVSWTHY 246
               ++    
Sbjct: 234 MMRKINLALN 243


>gi|238783035|ref|ZP_04627062.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri
           ATCC 43970]
 gi|238716036|gb|EEQ08021.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri
           ATCC 43970]
          Length = 284

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 101/310 (32%), Gaps = 65/310 (20%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77
           S + +A  L DIK+ G ++  +      F  +   +    G+DVD   A++  +      
Sbjct: 24  SAAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L SK++D+++ N   T  R     + F    +  GQ FI HK   +
Sbjct: 81  VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIRKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L          +  I P  I+K      I +G+      V+ T           
Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTATVNET----------- 242

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                                + ++K     +                     ++DR  G
Sbjct: 243 --------------------LVKLEKEGEAAK---------------------IYDRWFG 261

Query: 316 NQSELKIPRG 325
             +    PRG
Sbjct: 262 PATNAAQPRG 271


>gi|313895964|ref|ZP_07829518.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975389|gb|EFR40850.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 268

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 76/252 (30%), Gaps = 11/252 (4%)

Query: 2   YKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K+    +       ++L        A+       +G +  G++             +  
Sbjct: 3   RKNILTGVAAAMMSALLLTGCGGGDKAAAPAKDGDKGKIVVGLDDNFPPMGFKDEKNEIV 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +  +  +  +   +++  ++   +   L+S ++ IL    D T  R+    + 
Sbjct: 63  GFDVDLAKEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQILWNGLDITEKRKE--NML 117

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F        Q   + K    I+    L+G  I  Q+ +T E  +               +
Sbjct: 118 FSDPYMDSQQVIFVRKGDTAITDEQSLAGKVIGTQSASTAEEYIDATDFYKKDVKEVKKY 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                        R DA  GD          +    E   +P       L  A  + +T 
Sbjct: 178 PDFVATFMDLENGRLDAVVGDRIVGRYYMSKHPDKIEERNIPIGPKGE-LGIAFAKDNTA 236

Query: 237 WYNIVSWTHYAM 248
             + V      M
Sbjct: 237 LRDEVQKVMNEM 248


>gi|290473276|ref|YP_003466142.1| putative amino acid-binding protein (ABC superfamily, peri_bind)
           [Xenorhabdus bovienii SS-2004]
 gi|289172575|emb|CBJ79344.1| putative amino acid-binding protein (ABC superfamily, peri_bind)
           [Xenorhabdus bovienii SS-2004]
          Length = 282

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 13/243 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC 64
             ++  L  L   S    A  L DIKK G ++  +      F  +        G+DVD  
Sbjct: 9   VATVALLTSLALVSGVAKADKLDDIKKTGTVRIAVFDSNPPFGFIDPQTKKLAGYDVDIA 68

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A++S +      ++  P N   R   L SK+ID+++ N   T  R     + F    + 
Sbjct: 69  NAVASDLGVK---LELRPTNPANRIPLLSSKKIDLIAANFTITDERAK--QVNFSIPYFA 123

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
            GQ FI  K   + +   ++   I    GT  E+TL + +         I ++      A
Sbjct: 124 TGQKFIARKG-VLKTPDDIAKLRIGADKGTVQEITLRERYPTAK----VISYDDTPLAFA 178

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           A R     A T D + L  L          +  I P  I++   A A  +G+    N V+
Sbjct: 179 ALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAATKGEDRLINAVN 238

Query: 243 WTH 245
            T 
Sbjct: 239 QTL 241


>gi|91789816|ref|YP_550768.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91699041|gb|ABE45870.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 268

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 12/257 (4%)

Query: 2   YKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            K   V+ + L +L   + +    +A  + DI KRG +K G+  G      V ++G+  G
Sbjct: 4   KKILRVAAVGLTVLASVALTSTMASAQTVTDIIKRGKVKIGVLVGAPPMGAVDSSGNPVG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D D    ++  +      ++ + L    R  AL+S ++D L      T  R  +  + F
Sbjct: 64  YDADTAALIAKYLG---VPLEMVALEPPARIPALESGKVDFLVSTLAPTPERAKT--VMF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    G    K   +     L G  + V  G++ E  L             + F+ 
Sbjct: 119 TIPYNAFQVGIYAKKALKVKDWGDLKGKKVGVNRGSSVEAALVKQEGLVG--LKVVRFDT 176

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +  A  + + DA         A +    RP   + L    SK P + A+ +   E  
Sbjct: 177 DAAVIQAVFSGQIDACA--EPDTMANQSLKARPDGDMALKFFFSKQPNSIAVRKDAFELQ 234

Query: 239 NIVSWTHYAMVTAEELG 255
             ++ T Y +    EL 
Sbjct: 235 QWLNNTIYYIKVNGELD 251


>gi|213421095|ref|ZP_03354161.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 262

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 79/224 (35%), Gaps = 6/224 (2%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLA 91
           +  G     V F+         G+  D+  A+       +     +++ +P+ ++ R   
Sbjct: 2   IVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPL 61

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ+   D    +T   L R+      F    +  G   +  K   I     L G ++ V 
Sbjct: 62  LQNGTFDFECGSTTNNLERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVT 119

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +GTT+E+ L    +   M    I  +   +      + R  A+  D + L   +    +P
Sbjct: 120 SGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKP 179

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               I+    S+      + + D E+  ++  T     T+ E  
Sbjct: 180 DNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGEAE 223


>gi|328948883|ref|YP_004366220.1| ABC transporter periplasmic protein family 3 [Treponema
           succinifaciens DSM 2489]
 gi|328449207|gb|AEB14923.1| ABC-type transporter, periplasmic subunit family 3 [Treponema
           succinifaciens DSM 2489]
          Length = 278

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 98/250 (39%), Gaps = 18/250 (7%)

Query: 1   MYKD---FFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M         + +  I+  F++      T+A  +  IKK G +K  + +    F  V   
Sbjct: 1   MKTKNGIILATGIAAILALFSACVKENKTSARTVEQIKKSGEIKIAVFSDKKPFGYVDEY 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+++G+DV F   ++  +      ++Y+P+ A  R   L + ++DI+  N   T  R   
Sbjct: 61  GEYQGYDVYFGNRIAKDLGVK---VKYVPVEAASRVEFLVTGKVDIVLANFTVTPERAE- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F         G +  +   ++    L G  + +  GTT E      F  +  +   
Sbjct: 117 -KVDFALPYMKVALGVVSPESALVTKPEDLIGKKLIISKGTTAETY----FTKNYPEVEL 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F++  E  +A    R    + D + + A     + P   V +  +     +A A+ +G
Sbjct: 172 LKFDQYAEAYSALLDGRGAGMSTDNTEVLAWA--LENPGYKVGIESLGELDTIAAAVQKG 229

Query: 234 DTEWYNIVSW 243
           +T     ++ 
Sbjct: 230 NTSLLEWINN 239


>gi|146319016|ref|YP_001198728.1| glutamine ABC transporter substrate-binding protein [Streptococcus
           suis 05ZYH33]
 gi|146321225|ref|YP_001200936.1| glutamine ABC transporter substrate-binding protein [Streptococcus
           suis 98HAH33]
 gi|253752082|ref|YP_003025223.1| putative glutamine-binding protein precursor [Streptococcus suis
           SC84]
 gi|253753907|ref|YP_003027048.1| glutamine-binding protein precursor [Streptococcus suis P1/7]
 gi|253755218|ref|YP_003028358.1| glutamine-binding protein precursor [Streptococcus suis BM407]
 gi|145689822|gb|ABP90328.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor precursor
           [Streptococcus suis 05ZYH33]
 gi|145692031|gb|ABP92536.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor precursor
           [Streptococcus suis 98HAH33]
 gi|251816371|emb|CAZ52002.1| putative glutamine-binding protein precursor [Streptococcus suis
           SC84]
 gi|251817682|emb|CAZ55430.1| putative glutamine-binding protein precursor [Streptococcus suis
           BM407]
 gi|251820153|emb|CAR46491.1| putative glutamine-binding protein precursor [Streptococcus suis
           P1/7]
 gi|319758449|gb|ADV70391.1| glutamine ABC transporter substrate-binding protein [Streptococcus
           suis JS14]
          Length = 279

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 106/268 (39%), Gaps = 28/268 (10%)

Query: 1   MYKD-------FFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTG 43
           M K          + +  LI+L F           +  TN+  +  I  RG L+ G+   
Sbjct: 1   MDKKKINIFFAIRLLVFGLILLVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQD 60

Query: 44  LVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           +  F     + G+++G ++D  R ++  +  D   I++ P+ A+ R   L + Q+D++  
Sbjct: 61  VPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNSQVDMVIA 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R+  L   F    Y D  GF+++K  GI + + L G +I V  G+ T   +++
Sbjct: 118 TFTITEERK--LLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISE 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
               + +  +        E+  + RAHR DA++ D S L     +     +        S
Sbjct: 176 LADKYGITVNFAELGSYPELSVSLRAHRTDAFSVDQSILAGYISSKSELMDF-----SFS 230

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            S         + +  N ++        
Sbjct: 231 ASDYGIVTKLSNKDLNNYLNSLVEKWTA 258


>gi|254470766|ref|ZP_05084169.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
 gi|211959908|gb|EEA95105.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
          Length = 275

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 8/245 (3%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K      +++   ++  ++    A  + DI  +G L+CG+           ++ +  G
Sbjct: 1   MKKLIRNSFALVGAALMAASTAPAQADEIDDIIGKGTLRCGVMLDFPPAGFRNSSNEPDG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV +C+ ++ A+  +   ++     + ER  AL SK++D++  +   TL R  ++   F
Sbjct: 61  FDVQYCKDMAKALGVEAEVVE---TPSPERVPALVSKRVDVMIASASNTLERAKTVA--F 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFE 177
                      I  K   I S   L G S+    GTT E    ++F+  +    +   F 
Sbjct: 116 TMPYVVYTNVVITQKDSDIESFEDLKGRSVGNVVGTTPEQFFLEHFEKWDDSNGNYTGFG 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   A    + +A  G  +    L  + + P+  +      +   ++ A+ + D   
Sbjct: 176 SDAESYLAVSQGKVEAIIGSSAQAADLIASGNFPNLEIRAEAPFTVDLVSIAVNKDDHSL 235

Query: 238 YNIVS 242
               +
Sbjct: 236 LRWAN 240


>gi|55821468|ref|YP_139910.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737453|gb|AAV61095.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
          Length = 264

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K F  ++  L+ +   +  +       IK+   L   ++     F     V       
Sbjct: 1   MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+   +A+++ +      ++   ++      +LQS + D+       T  R+ +    
Sbjct: 61  GSDIKLAQAIANELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115

Query: 118 FRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K  +   SS+  L G  + VQ GT  E       K        I 
Sbjct: 116 FSDPYYETQNAIIVRKGQESTYSSLDALKGKKVAVQKGTIEEGLAKKQLK----DSIVIS 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              + E     ++ + DA   +          N   +   +   +      A A+ +G+ 
Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLTLASVALKVDDGDAKAVAMTKGND 231

Query: 236 EWYNIVSWTHY 246
           +    V+    
Sbjct: 232 KLKEAVNKVIK 242


>gi|312864872|ref|ZP_07725103.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
 gi|311099999|gb|EFQ58212.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
          Length = 282

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 90/254 (35%), Gaps = 8/254 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F V+++       ++F+T         K   +K G +   V     + +G + GFDVD  
Sbjct: 15  FLVALVLASCSSRSNFATETDQWQTYSKEKTIKIGFDATFVPMGFEEKDGKYTGFDVDLA 74

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A+         K+++  ++   +   L++  ID++      T  R+  L   F      
Sbjct: 75  NAVFKKYG---IKVEWQAIDWDMKETELKNGTIDLIWNGYSVTDERKKELA--FTEPYMV 129

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEE 181
           + Q  +  K  GISS++ ++G S+  QAG++         D  K        + +    +
Sbjct: 130 NQQVVVTKKSSGISSIAMMAGKSLGAQAGSSGYDAFESQPDLLKNKVKDKKAVQYSTFTQ 189

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                +A R D    D            +  ++ I+P        A    + D      +
Sbjct: 190 ALIDLQAGRIDGLLIDRVYANYYLEQEGKLDQYNIMPAGYEAESFAVGARKSDKTLVKKI 249

Query: 242 SWTHYAMVTAEELG 255
           +     +  A +  
Sbjct: 250 NQAFKELYQAGQFQ 263


>gi|317153668|ref|YP_004121716.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943919|gb|ADU62970.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 289

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 90/271 (33%), Gaps = 35/271 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN----------------------ASILGDIKKRGFLKC 38
           M +   +      ++F  +                          AS L  I +RG L+ 
Sbjct: 1   MKRVLGLVAALATLVFLVACGQQPEQQAGAPAPKQDMNVRLELSKASALEKIMQRGTLRV 60

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           G+  G + F      G+  GFDVD    ++ A+      ++ +         AL S + D
Sbjct: 61  GLEAGYMPFEMTDKKGNIVGFDVDMVTEMAKAMGVK---LELVNTAWDGIIPALLSDKFD 117

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLS--GASICVQAGT 154
           I++        R  +L + F       GQ  +++      I+S   L+  G +I  + GT
Sbjct: 118 IIASGMTVNQER--NLKINFADPYIIVGQTALINAVDADKITSWKDLNAEGITITSKLGT 175

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E  +               FE   E        +  A   D+           +    
Sbjct: 176 TGEQAVKRLMPKA----TYKSFETESEAMLEVLNGKATATVYDLPMTSIFYAERGKEGGM 231

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L +  +  PL  AI +GD ++ N ++   
Sbjct: 232 KFLSEPFTYEPLGWAINKGDPDFLNWLNNFL 262


>gi|330875049|gb|EGH09198.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 283

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +     L  T  +  +S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLAASFSLTNTVQAAESSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|238765553|ref|ZP_04626466.1| Extracellular solute-binding protein, family 3 [Yersinia
           kristensenii ATCC 33638]
 gi|238696231|gb|EEP89035.1| Extracellular solute-binding protein, family 3 [Yersinia
           kristensenii ATCC 33638]
          Length = 284

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 103/310 (33%), Gaps = 65/310 (20%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           S + +A  L DIK+ G ++  +      F  +        G+DVD   A++  +      
Sbjct: 24  SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L SK++D+++ N   T  R     + F    +  GQ FI HK   +
Sbjct: 81  VELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   ++G  I    GT  E+TL D +         I ++       A R     A T D
Sbjct: 138 KTPEDIAGLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L          +  I P  I+K      I +G+      V+ T           
Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTAQVNET----------- 242

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                                + ++K     +                     ++DR  G
Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261

Query: 316 NQSELKIPRG 325
            +++   PRG
Sbjct: 262 PETKAAQPRG 271


>gi|315037806|ref|YP_004031374.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112]
 gi|325956282|ref|YP_004286892.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
 gi|312275939|gb|ADQ58579.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112]
 gi|325332847|gb|ADZ06755.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
          Length = 272

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 12/247 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K +   ++ LI +  ++     N S+   +++   +  G+      F  +   +   +G
Sbjct: 4   KKFYLTFLIALITITLSACGQKKNESVYQTVRQTKTINWGVKADTPLFGSMSVKDSKIRG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D   AL+  +    +K  ++   A  +   L++K ID +      T  R+    + F
Sbjct: 64  FEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVIAAMTITPERKK--QVNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +  GQ  ++ K   I +V  L+   + +  GTT    +  +          + F+ 
Sbjct: 122 SNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTAADAVHKFAPKA----EILQFDD 177

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +  AA +A + DA   D   L            + +     +  P   A+ +G T   
Sbjct: 178 YGQAFAALKADQGDALVTDNGILAG---ILHDNPGYKLTGGTFTNQPYGIAVNKGQTAMM 234

Query: 239 NIVSWTH 245
             ++   
Sbjct: 235 KHINTAL 241


>gi|33602282|ref|NP_889842.1| solute-binding protein [Bordetella bronchiseptica RB50]
 gi|33576721|emb|CAE33799.1| probable solute-binding protein [Bordetella bronchiseptica RB50]
          Length = 272

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 14/276 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M K   +++L + +L   +   +A  L DIK RG L CG       F+    A     G+
Sbjct: 1   MMKRNVLAVLTISLLGL-AGPAHADQLDDIKARGELLCGTLGTSQPFSYQDAATRTVVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+ ++  +      + Y  L+   R   L   ++DIL+ N       E +  +AF 
Sbjct: 60  DVDMCKLVADKLGVK---VNYKLLSVAARVPELNESRVDILAANLG--YSPERAEQIAFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   Q  ++ K   + ++  ++G  +    G+++E  +             + F   
Sbjct: 115 HTYYVSPQKLLVRKDSNLQTIESVNGRRVAATKGSSSEREIKRILDK----SQVLGFTDS 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +  + DA       L  L L +   +   I+   +   P    + + +T +  
Sbjct: 171 SASYLALQQKKVDAQFASELVLVRLMLQSPPTAPVSIIDKAVFDEPWGLGMRKSETRFIA 230

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
            V+        AE  G  Q+   +     T   +QR
Sbjct: 231 KVNEILD---QAEASGEAQRLFEKWFGAQTPYKLQR 263


>gi|148544724|ref|YP_001272094.1| extracellular solute-binding protein [Lactobacillus reuteri DSM
           20016]
 gi|184154076|ref|YP_001842417.1| glutamine ABC transporter substrate binding component
           [Lactobacillus reuteri JCM 1112]
 gi|227363849|ref|ZP_03847954.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM2-3]
 gi|325683059|ref|ZP_08162575.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus reuteri MM4-1A]
 gi|148531758|gb|ABQ83757.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183225420|dbj|BAG25937.1| glutamine ABC transporter substrate binding component
           [Lactobacillus reuteri JCM 1112]
 gi|227071076|gb|EEI09394.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM2-3]
 gi|324977409|gb|EGC14360.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus reuteri MM4-1A]
          Length = 276

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 19/255 (7%)

Query: 1   MYKDF----FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52
           M K +      ++L + +L  ++         +L +  +   +  G+      F      
Sbjct: 1   MKKYWRLISLSALLFVALLTLSACGTSIAKKDVLTEDMRSQRITWGVKADTRLFGLENIR 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G  +GF++D   A++  I     K  ++P+ +  R   L++  ID +      T  RE 
Sbjct: 61  TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170
              + F    +  GQ  ++ K   I ++S L+  GA I   +G+ +   +A +       
Sbjct: 121 --QVDFTHSYFDAGQSLLVKKGSPIKNISDLNRRGAVILGVSGSNSVKNVAKFAPKA--- 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +      +   A ++ + DA T D   LY +    + P  + ++    +K P   A+
Sbjct: 176 -RVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAA--ENPG-YEVVGGNFTKEPYGIAV 231

Query: 231 IQGDTEWYNIVSWTH 245
            +  T + N ++W  
Sbjct: 232 NKNQTRFRNKLNWAL 246


>gi|190894703|ref|YP_001984996.1| putative amino acid ABC transporter substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190700364|gb|ACE94446.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 279

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 4/250 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L +  L  T    + S L ++  RG L  G  +    +    A+   +GFDVD    
Sbjct: 9   VMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF    Y +G
Sbjct: 69  IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G ++      +  + L  A           +       A   +     +E V+ I  A 
Sbjct: 127 VGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYESVDLIYQAL 186

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + R DA   D S+L         P  +       +    A A+ +GD +W N V+   +
Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244

Query: 247 AMVTAEELGI 256
             +T  E   
Sbjct: 245 EAMTGVEFDF 254


>gi|59712194|ref|YP_204970.1| lysine/arginine/ornithine transporter subunit [Vibrio fischeri
           ES114]
 gi|59480295|gb|AAW86082.1| lysine/arginine/ornithine transporter subunit [Vibrio fischeri
           ES114]
          Length = 258

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L   + +         K+   ++ GI      F+  + +G+ KGFD
Sbjct: 1   MKKWLLAAVVASTALTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    ++ + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTE 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K    + +   L G ++ VQ  TT +  L D F           +   
Sbjct: 107 KYALIPNKFVAKKGTKLVMTKEGLKGVTVGVQRATTHDKYLTDNF---GKGVDLKRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E     +A R D   GD SAL    L     +E+  +   ++           A  + D
Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGTEYEFVGPSLTDPKWFGEGFGIATRKQD 223

Query: 235 TEWYNIVSWTH 245
            +    ++   
Sbjct: 224 KDLTEQLNAAI 234


>gi|283833316|ref|ZP_06353057.1| extracellular solute-binding protein [Citrobacter youngae ATCC
           29220]
 gi|291070954|gb|EFE09063.1| extracellular solute-binding protein [Citrobacter youngae ATCC
           29220]
          Length = 277

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 90/231 (38%), Gaps = 11/231 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74
             ++    A  L DIK  G +K         F  + A      G+DVDF  AL+ ++   
Sbjct: 23  GISASQAQADQLADIKAAGVVKVATFDANPPFGSIDAKTHKIVGYDVDFAEALAKSLGVK 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++ +  N   R   LQS + D++  +   T  R  +  + F    +  GQ F++  K
Sbjct: 83  ---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSVPYFVTGQQFLVPAK 137

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                + + S A I    GTT E  L   F     +   + ++ +     A R     A 
Sbjct: 138 SP-DKLDEYSKARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPLALTALRNGNVQAI 192

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           T D + L  L       ++  ILPD++SK  +   + +G+      V+   
Sbjct: 193 TQDSTILAGLLGGAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAVNDEL 243


>gi|301629487|ref|XP_002943871.1| PREDICTED: ABC transporter arginine-binding protein 1-like [Xenopus
           (Silurana) tropicalis]
          Length = 310

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 94/317 (29%), Gaps = 23/317 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-------FLKCGINTGLVGFAEVKAN 53
           M K    ++L L  +        ++                 +  G++            
Sbjct: 1   MKKFAIAALLTLGAVLAGCSREESAAPAATPVPAPAPVAVTRIVMGLDDNFPPMGFRDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D  + ++        ++++ P++   +   L  K++D+L      T  R   
Sbjct: 61  NELVGFDIDMAKEVARR---QGLEVEFKPIDWSAKEAELSGKRVDVLWNGLTITEER--R 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F      + Q  ++     I + + L+G  + VQ G++    +      +      
Sbjct: 116 QNILFTAPYMENHQIIVVPAGSAIKAKADLAGKVVGVQEGSSAVDAIKKEEAVYQSFKEL 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F             R DA   D   +        +  ++ +L D          + + 
Sbjct: 176 KAFGDNVAALMDLTTGRLDAVVVDE--VVGRYYVAKKADQYAVLEDNFGTEAYGVGLRKD 233

Query: 234 DTEWYNIVSWTH-------YAMVTAEELGITQKNINQVSKDTTNPDVQRF-LGIDKSSNI 285
           DT  +  +            A   AE++    K        T      R    +      
Sbjct: 234 DTALHGRIDKALADMKADGSAAKIAEQITSAPKRTVWACARTIPALHGRIDKALADMKAD 293

Query: 286 GEALGLTKDWT-YRIIR 301
           G A  + + W    II+
Sbjct: 294 GSAAKIAEQWFGKNIIK 310


>gi|256026691|ref|ZP_05440525.1| solute-binding protein for glutamate_aspartate ABC transporter
           system [Fusobacterium sp. D11]
 gi|260495454|ref|ZP_05815580.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium sp. 3_1_33]
 gi|289764686|ref|ZP_06524064.1| ABC-type amino acid transport/signal transduction system
           [Fusobacterium sp. D11]
 gi|260196991|gb|EEW94512.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium sp. 3_1_33]
 gi|289716241|gb|EFD80253.1| ABC-type amino acid transport/signal transduction system
           [Fusobacterium sp. D11]
          Length = 293

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 29/260 (11%)

Query: 2   YKDFFVSILCLIILFFTSF------------------STNASILGDIKKRGFLKCGINTG 43
            K   ++I+ + +L   +                   +  A  + +IK  G +K G+ T 
Sbjct: 5   KKVLKLAIVGVAVLALAACENKTEEAKPESQAPAQETTAKARTVQEIKDSGVIKIGVFTD 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  V  NG  +G+DV F   L+  +      ++Y+ L+   R    ++ + DI++ N
Sbjct: 65  KAPFGYVDENGKNQGYDVYFTNRLAKDLGVK---VEYISLDPASRVEYAETGKADIVAAN 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +   K  I S+ +L   ++ V  GTT E      
Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDKAVIKSIDELKDKTLIVSKGTTAEYY---- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F  +  +     ++   +   A    R DA++ D + + A       P   V +  +   
Sbjct: 176 FSKNYPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KANPGFTVGIDSLGDV 233

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +A A+ +G+ +  + ++ 
Sbjct: 234 DTIAVAVQKGNKDLLDWINN 253


>gi|268319110|ref|YP_003292766.1| amino acid ABC transporter solute-binding component [Lactobacillus
           johnsonii FI9785]
 gi|262397485|emb|CAX66499.1| amino acid ABC transporter solute-binding component [Lactobacillus
           johnsonii FI9785]
 gi|329666941|gb|AEB92889.1| glutamine ABC transporter solute-binding component [Lactobacillus
           johnsonii DPC 6026]
          Length = 274

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++++   +K+   +  G+      F  +    G  +GF+VD  +AL+  +    +K +++
Sbjct: 29  SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 88

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
               K R   L++  ID +      T  R+    + F    +  GQ  ++     I +V 
Sbjct: 89  QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDDSSIKNVR 146

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G +     GTT    +  +          + ++   +   A +A +  A T D   L
Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 202

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   N     + ++    +  P   A+ +G T++ + ++    
Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN 244


>gi|317153612|ref|YP_004121660.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943863|gb|ADU62914.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 274

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 102/249 (40%), Gaps = 11/249 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   +S+L  +++   + +        +     +K G++   +    +    +W GFDVD
Sbjct: 2   RVLKISVLAALLVMAATVAFAGPTYDRVMSTKVVKAGMSNQGIPGGFINDKNEWVGFDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFRP 120
               ++  +     K+    +N   R   +Q+   ++D++  N   T  RE    + F  
Sbjct: 62  MATEIAKRLGCTLEKVV---VNNNTRVSFVQTDPPKVDMVLANM--THKRERDQKIDFSI 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             +FDGQ F+  K   +  V  L+G  +    GTT+ +   +Y K         I ++  
Sbjct: 117 TYFFDGQKFLAKKG-AVKDVKDLAGMKVGSMQGTTSIVNATEYLKKLGNPDPKVIGYDGE 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +  A R+ R  A + D + L         P +  ++ D IS  P    + Q D+ W +
Sbjct: 176 IAMFEALRSGRVQAISTDSTILLGYAAKV--PGQFELVGDFISDEPYGIGLPQDDSAWRD 233

Query: 240 IVSWTHYAM 248
           I+++T   M
Sbjct: 234 IINFTIQDM 242


>gi|257461485|ref|ZP_05626581.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441208|gb|EEV16355.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 268

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 18/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K FF+ +L  I +F       A+ L +IK+   ++ G+      F++    G ++GF+
Sbjct: 1   MKKSFFLILLSAIFVF-------ANSLSEIKQSKVIRVGVYENEPPFSKSSEKG-FEGFE 52

Query: 61  VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           V+   AL+  IF +   +I+ +P+  + RF  LQ+ Q D++      T  R+    + F 
Sbjct: 53  VELANALAGKIFGNSGGRIELIPVTNEVRFPMLQNNQADMIIAAASITEERKG--SVDFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    G +  K   I  +  L G  I +   TT E  +       +  Y+       
Sbjct: 111 MPYFTVNLGILTKKDSNIHKIGDLMGKKIGIIRKTTGEAYI-----KKDGGYNVSYCNDS 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     ++   D Y  +   +    +    P+  V + ++     L  A+ +G+ E   
Sbjct: 166 VDCYRRLKSGEIDGYCNNNLFVMVYPIV--DPAVEVNIKNLGDNVFLGVAVQKGNAELLE 223

Query: 240 IVSWTHYAM 248
            ++    A+
Sbjct: 224 AINKGLIAL 232


>gi|227529681|ref|ZP_03959730.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350471|gb|EEJ40762.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
          Length = 280

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 18/268 (6%)

Query: 1   MYK-DFFVSILCLI--ILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K  +++ +L LI  I+F +        +        I++R  +  G++   V     +
Sbjct: 1   MRKIKYWLVLLALITPIIFLSGCESVTQRANTQDTWNRIERRKRVVIGLDDSFVPMGFRQ 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG   G+DVD  RA+            + P++   +   L++  ID+L         R 
Sbjct: 61  KNGKLVGYDVDLARAVFKQYGIKAD---FQPIDWSMKETELKNGTIDLLWNGYSINSSRR 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-- 169
               +AF      + Q  +  K   I + + + G S+ VQ G+T    L +  KA     
Sbjct: 118 K--KVAFSRPYLKNEQILVTKKASNILNFAGMKGKSLGVQNGSTGLTALDERPKALKDLI 175

Query: 170 -KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLA 227
               P++++   +      A+R      D              S +       +     A
Sbjct: 176 KNQKPVLYDTFPDAFIDLNANRIQGILMDQVYADYYIKHQKNSSSYRTYSSKELPVEYYA 235

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + +GD      ++     +    EL 
Sbjct: 236 VGMRKGDKTLRQKINAGLGKLQKNGELR 263


>gi|254382236|ref|ZP_04997597.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1]
 gi|194341142|gb|EDX22108.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1]
          Length = 301

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 10/236 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
           +        +      K+RG L  G+        E    +G + GFD++  + +S+++  
Sbjct: 41  VATGFSLPGSPTWERAKRRGHLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMSASLGF 100

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DP  I++  + +  R  ALQ+ QID           R+  +G  F    +  GQ  ++ K
Sbjct: 101 DPKTIEFKTIASANRETALQNGQIDYYVGTYTINDNRKKQVG--FAGPYFMAGQSLLVRK 158

Query: 134 KK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
            +  I     L+G  +C  AG+T    L   +         + ++           ++ D
Sbjct: 159 DEKDIKGPEDLAGKKVCSAAGSTPYQRLQKEYPEA----VLVAYDTYSACVDNLLTYQVD 214

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           A + D S L         P E  ++    S+ P    + + D      +     A 
Sbjct: 215 AVSTDDSILLGYAAKV--PDELKVVGKPFSEEPYGIGVPRSDNALRLALDDALEAN 268


>gi|228477062|ref|ZP_04061700.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
 gi|228251081|gb|EEK10252.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
          Length = 264

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K F  ++  L  +   +  +       IK+   L   ++     F     V       
Sbjct: 1   MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+   +A++  +      ++   ++      +LQ+ + DI       T  R+ +    
Sbjct: 61  GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQAGKADIAISGISVTDERKKT--FD 115

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K      SS+    G  + VQ GT  E       K        + 
Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              + E     ++ + DA   +          N   +   +   +      A A+ +G+ 
Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVDDGDAKAVAMAKGND 231

Query: 236 EWYNIVSWTHY 246
           +    V+    
Sbjct: 232 KLKEAVNKVIK 242


>gi|308067557|ref|YP_003869162.1| Cystine-binding periplasmic protein precursor [Paenibacillus
           polymyxa E681]
 gi|305856836|gb|ADM68624.1| Cystine-binding periplasmic protein precursor [Paenibacillus
           polymyxa E681]
          Length = 285

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 83/270 (30%), Gaps = 28/270 (10%)

Query: 2   YKDFFVS---ILCLIILFFTSFS-----------------TNASILGDIKKRGFLKCGIN 41
            K F V+    L L  L  ++                      + L  IKK G +K G+ 
Sbjct: 5   KKGFLVTTLMALALFSLVLSACGTKPEASNTSNGAGSSNVAAGNQLEAIKKAGVIKVGMM 64

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                +  +  N +  GFDVD  + L+  I   P    +          +LQ K+ D + 
Sbjct: 65  GTYPPYNFLNDNKELDGFDVDIAKELAKRIGVKPE---FTAQEFSGLIPSLQKKKFDAVI 121

Query: 102 RNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                T  R+    + F      +     +  K   I+ +    G +I V  GT  E  L
Sbjct: 122 SQVTITEDRKK--AIDFTEPYITNNVNIIVNSKTNDITKLEDFKGKTIGVGLGTNDESYL 179

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            +        +    ++ V        + R DA   +        + +    +   + + 
Sbjct: 180 RNEVLPKVGDFEIKTYDDVITSLKDLNSGRIDATINN--LYALKPIIDKNGFQIKAVGEP 237

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           I       AI Q   E    ++     M  
Sbjct: 238 IKSDQAGVAINQKTPELKEALNKALKEMKE 267


>gi|58337930|ref|YP_194515.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM]
 gi|227902903|ref|ZP_04020708.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus acidophilus ATCC 4796]
 gi|58255247|gb|AAV43484.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM]
 gi|227869319|gb|EEJ76740.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus acidophilus ATCC 4796]
          Length = 272

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K +   +L  ++L  T        +   +    I ++  +  G++   V     K NG
Sbjct: 1   MKKKWIFVLLATLMLVLTGCESVQKRANTQNTWNKIAQKKQVVIGLDDSFVPMGFEKKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+DVD  + +      +   + +  ++       L++  ID+L      T  RE   
Sbjct: 61  QLTGYDVDLAKEVFKLYGIN---VSFQTIDWSMNVTELRNGTIDLLWNGYSITKQREK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF      + Q  ++ K  GISS SQ+    + +Q G+T E          + K   +
Sbjct: 116 KVAFSRPYLRNRQVLVVKKNSGISSFSQMKKYELGMQTGSTAEQWYETKQNILHAKKT-V 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233
           +++ +        A R      D            +   + ++  D +     A  + +G
Sbjct: 175 LYDTISNSFLDLNAGRIQGILLDEVYANYYIAHMAKSKNYKVIQNDAVPMDLFAVGMRKG 234

Query: 234 DTEWYNIVSWTH 245
           D      V+   
Sbjct: 235 DKTLRKKVNQGL 246


>gi|225870392|ref|YP_002746339.1| amino acid ABC transporter, extracellular amino acid-binding
           protein [Streptococcus equi subsp. equi 4047]
 gi|225699796|emb|CAW93609.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus equi subsp. equi
           4047]
          Length = 278

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 80/255 (31%), Gaps = 13/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K   V++         +   +     +      K++  +  G +   V       +G  
Sbjct: 4   KKTLLVALFAATATLLVACGASNKQTSSDAWDSYKQKKTITLGFDNTFVPMGYKDESGKN 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD++  +A+      +   ++Y  +N   +   L + +ID++      T  R+    +
Sbjct: 64  TGFDIELAKAVFDQYGIN---VKYQAINWDLKETELNNGKIDLIWNGYSVTKERQA--KV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173
           AF      + Q  +  K   ISS + +   ++  Q+G++       + K           
Sbjct: 119 AFTEPYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGNDA 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     +  R D    D                + I+         A  + + 
Sbjct: 179 TQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRKA 238

Query: 234 DTEWYNIVSWTHYAM 248
           D      ++    ++
Sbjct: 239 DKTLQKKITQALKSL 253


>gi|195978015|ref|YP_002123259.1| amino acid ABC transporter extracellular-binding protein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974720|gb|ACG62246.1| amino acid ABC transporter extracellular-binding protein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 278

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 80/255 (31%), Gaps = 13/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K   V++         +   +     +      K++  +  G +   V       +G  
Sbjct: 4   KKTLLVALFAATATLLVACGASNKQTSSDAWDSYKQKKTITLGFDNTFVPMGYKDESGKN 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD++  +A+         K++Y  +N   +   L + +ID++      T  R+    +
Sbjct: 64  TGFDIELAKAVFDQYG---IKVKYQAINWDLKETELNNGKIDLIWNGYSVTKERQA--KV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173
           AF      + Q  +  K   ISS + +   ++  Q+G++       + K           
Sbjct: 119 AFTEPYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGNDA 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     +  R D    D                + I+         A  + + 
Sbjct: 179 TQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRKA 238

Query: 234 DTEWYNIVSWTHYAM 248
           D      ++    ++
Sbjct: 239 DKTLQKKITQALKSL 253


>gi|261822707|ref|YP_003260813.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261606720|gb|ACX89206.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 268

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 94/254 (37%), Gaps = 10/254 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++   +L   + S  A  L DI+KRG L+  +      F  V  +   +G+D+
Sbjct: 8   IKKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R L+  +      +Q +P+ +  R   LQ+ ++D++  +      RE    + F   
Sbjct: 68  DIARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   ++S   L G SI V  G   ++ L +             +E    
Sbjct: 123 YAPFFLGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKA---AQIKRYEDNNT 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + + +        + A+      P++  +   ++  SP    + + +      V
Sbjct: 180 TLSAYLSGQVEFVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKV 237

Query: 242 SWTHYAMVTAEELG 255
                  +  E L 
Sbjct: 238 DALIEQALKDETLN 251


>gi|330816747|ref|YP_004360452.1| Extracellular solute-binding protein, family 3 [Burkholderia
           gladioli BSR3]
 gi|327369140|gb|AEA60496.1| Extracellular solute-binding protein, family 3 [Burkholderia
           gladioli BSR3]
          Length = 264

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 83/252 (32%), Gaps = 19/252 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K    + L +   F  + S  A +L + K+RG L+ G+      F     +G+ 
Sbjct: 1   MKIVSLKKLLTAAL-IGASFVAATSHAADLLDEAKQRGTLRIGLEGTFPPFNSKAPSGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L
Sbjct: 60  VGYDVDIAKAVAAKLGLKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGVTDKRKEV--L 114

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F P   +     I  K       S+  L G  + V  GT                    
Sbjct: 115 DFSPAYTYSAAQLIQRKDDTRNFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVK 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E      A R DA   D   L  L   +  P        + +  P A    +G+
Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGATLEAGQPSAIPFKKGN 227

Query: 235 TEWYNIVSWTHY 246
            ++   +     
Sbjct: 228 PKFAKAIDDAMT 239


>gi|291544976|emb|CBL18085.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Ruminococcus sp. 18P13]
          Length = 277

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 10/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +IL   +L  T  +          ++     G +     F  V  NG++ GFD
Sbjct: 1   MKLKSIFAILTAGVLACTGLTACGDDKAASNQKATFTVGFDQDFPPFGYVDENGEFTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +  +  +     +I+  P++   + L L S  I  +                 +  
Sbjct: 61  LELAKEAAKRM---DMEIKLQPIDWDSKELELSSGSISCIWNGFTMNG---RENDYTWTE 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFER 178
               + Q F++    GI + + L+G  +  Q  +     L   D+          +   +
Sbjct: 115 SYMDNSQVFVVKSDSGIKTQADLAGKIVTAQTDSAALNALNGDDFKDLKASFKELLTCAQ 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                    A   DA   D     A      + S+ +IL + I K   A    +G+TE  
Sbjct: 175 YNTAFMDLEAGAVDAVAMD--IGVAKYQIEGKESKFIILDEPIVKEQYAVGFYKGNTEMR 232

Query: 239 NIVSWTHYAM 248
           + V      M
Sbjct: 233 DKVQKALDEM 242


>gi|227890100|ref|ZP_04007905.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849544|gb|EEJ59630.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 284

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 38/296 (12%)

Query: 1   MYKDFFV-------SILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44
           M K  F+        IL +  +  T+ S N+S          +  IKKRG LK  +   L
Sbjct: 1   MKKHKFIKKLIAAVGILAVGAVILTACSNNSSSNSSSNNPSSVAAIKKRGTLKVAVFGDL 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             +  V  +G   G+DV   R L+  +      ++++ +NA  R   L + + DI+  N 
Sbjct: 61  PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K K I++V+QL G  + V  GTT E    +YF
Sbjct: 118 TVTSERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            +       + F+   +   A +  R  A   D S LYA     + P   V +  +   S
Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
            +APA+ +G+    +  +             I + N +    +  N +++ + G D
Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------HINKLNKDGFFVNDYNQELKPYFGND 274


>gi|150376683|ref|YP_001313279.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150031230|gb|ABR63346.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 280

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 7/259 (2%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   F      +  ++    + +  AS  L ++  RG L  G  +    +    A    +
Sbjct: 1   MISKFTAVAGFVAAVLAGMPAHAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  R ++ A+F DP KI+++  ++  R   + + ++DI  +    T  R  +  +A
Sbjct: 61  GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y +G G ++           L  A   V       +   D   A   +     +E
Sbjct: 119 FTIPYYREGVGLMLKADGKYGDYEALKAAGSSVTISVLQNVYAEDMVHAALPEAAVDQYE 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            V+ I  A  + R DA   D S+L            +       +    A  + +GD +W
Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQ--NSGRYKDAGYGWNPQTYACGVRRGDQDW 236

Query: 238 YNIVSWTHYAMVTAEELGI 256
            N V+   +  +T  E   
Sbjct: 237 LNFVNTALHEAMTGVEFDF 255


>gi|306829415|ref|ZP_07462605.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus mitis ATCC 6249]
 gi|304428501|gb|EFM31591.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus mitis ATCC 6249]
          Length = 263

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 92/257 (35%), Gaps = 14/257 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     +L L    F T+ +  AS          +K+G +  G +   V     + NG
Sbjct: 1   MKRKKIALVLALFFSFFLTACTQKASDPKQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D  +A+S  +     +I++ P++   +   LQ+  ID +      T  R+   
Sbjct: 61  QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYSATDERKE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            ++F      + Q  +  K + I S+  ++  ++  QAG++  L      +  K      
Sbjct: 116 KVSFTIPYMENQQVLVSKKSQNIHSIQDMTDKTLGAQAGSSGYLNFERQPEPLKNRVKDQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R DA   D         +    + + +          +  + 
Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNNYNVFSAGFESESFSVGVR 235

Query: 232 QGDTEWYNIVSWTHYAM 248
             D      ++    A+
Sbjct: 236 PADKTLLVALNKAFVAL 252


>gi|168485722|ref|ZP_02710230.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC1087-00]
 gi|221231432|ref|YP_002510584.1| putative glutamine-binding protein precursor [Streptococcus
           pneumoniae ATCC 700669]
 gi|298229830|ref|ZP_06963511.1| putative glutamine-binding protein precursor [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255470|ref|ZP_06979056.1| putative glutamine-binding protein precursor [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502401|ref|YP_003724341.1| amino acid ABC superfamily transporter ATP-binding protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|183571134|gb|EDT91662.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC1087-00]
 gi|220673892|emb|CAR68398.1| putative glutamine-binding protein precursor [Streptococcus
           pneumoniae ATCC 700669]
 gi|298237996|gb|ADI69127.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 254

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+  +I V  G+ T+  + +  K   + +  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|332160644|ref|YP_004297221.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|325664874|gb|ADZ41518.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
          Length = 263

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  +++   + +  A  L  I++RG L+  +      F  V  +   +G+D
Sbjct: 3   MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    +AF  
Sbjct: 62  IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K+  +    QL+G ++ V  G   ++ L++             +E   
Sbjct: 117 AYAPFFLGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNN 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + + D        L    L    P++  +   ++  SP    + QG+      
Sbjct: 174 TTLSAYLSGQVDYLATGN--LVVSALARQNPAQAPVAKFMLKDSPCYIGLRQGEPALKAK 231

Query: 241 VSWTH 245
           V    
Sbjct: 232 VDALI 236


>gi|229829988|ref|ZP_04456057.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM
           14600]
 gi|229791286|gb|EEP27400.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM
           14600]
          Length = 294

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 94/271 (34%), Gaps = 29/271 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------------TNASILGD--IKKRGF-LKCGIN 41
           M K     ++ ++ L  T+                    +       +K     L  G +
Sbjct: 4   MKKIMAFGLIAVMALAVTACGTKSGDQKNANSGDGSKAESKTAKKGDVKNTDQNLIVGFD 63

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                F  + +NG++ GFD++  +  ++ +  +   +   P++ + + + L +  ID + 
Sbjct: 64  QNFPPFGYLDSNGNFTGFDLELAQEAANRMKVE---LVLQPIDWETKDMELSAGTIDCIW 120

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                           F      + Q F++ K  GI     L+G  + VQ  ++ E  L 
Sbjct: 121 NGFSVNG---REKNYTFSDSYMNNAQVFVVRKNSGIEDEQGLAGKVVDVQKESSAETALN 177

Query: 162 DYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
              +    N                   +   DA   D     AL    ++P +  IL +
Sbjct: 178 SKEEETLKNSFAQLNQVADYNTAMMDLESGAVDAVAMDK--FVALDQMKNKPDKFQILNE 235

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            IS    A A ++G+T+  + V+   + M T
Sbjct: 236 QISSEQYAVAFLKGNTQLRDQVNSVLHEMDT 266


>gi|225350813|ref|ZP_03741836.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158269|gb|EEG71511.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 302

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 11/218 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +IKK G LK  + +    F  V  +G++ G+DV F   L   +  D   ++Y  ++A
Sbjct: 56  TLDEIKKSGKLKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLGKDLGVD---VEYTSVDA 112

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R   L S ++DI   N   T  R+    + F         G +  +   I+ V QL G
Sbjct: 113 AARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENAEITDVDQLKG 170

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ V  GTT E     +F+ +        +++  +   A    R DA++ D + + A  
Sbjct: 171 KTLIVTKGTTAET----FFEKNYPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 226

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                    V + ++  K  +A A+ +G+ E  + ++ 
Sbjct: 227 --KSNKGFKVGITELGDKDTIAAAVQKGNKELLDWIND 262


>gi|240168877|ref|ZP_04747536.1| putative glutamine-binding lipoprotein [Mycobacterium kansasii ATCC
           12478]
          Length = 328

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 10/226 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +   + + +I +RG L  G++ G   F+      GD  GFDVD    ++  IF  PS ++
Sbjct: 79  AEADAAVANIHERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEVARDIFGSPSHVE 138

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  L+A ER  ALQ+ Q+D++ +    T  R     + F  +     Q  +  +   IS 
Sbjct: 139 YRILSAAERITALQTSQVDVVVKTMTITCERRKL--VNFSTVYLDANQRILAPRDSSISK 196

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           VS LSG  +CV  GTT+   + +           +      +   A +  + DA + D S
Sbjct: 197 VSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVAMQQRQIDAVSTDDS 252

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L  L    + P  H++ PD ++  P    I   +T     V+ T 
Sbjct: 253 ILAGL--VEEDPYLHIVGPD-MANQPYGIGINLDNTGLVRFVNGTL 295


>gi|297191653|ref|ZP_06909051.1| glutamate binding protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721587|gb|EDY65495.1| glutamate binding protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 278

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M      +    ++    S +   S     K+ G       +  GI     G      +G
Sbjct: 1   MKLRKVTAASATVLALALSATACGS--DSGKESGSGDGGDKITIGIKYDQPGLGLKTPDG 58

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFDVD    ++  +      I++    + +R  AL    +D ++     T  R+   
Sbjct: 59  -FTGFDVDVATYVAKELGYAEDDIEFKETKSADRETALARGDVDFIAATYSITDERK--Q 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F        Q  ++     +S    L+G  +C   G+T+   +   F          
Sbjct: 116 KVDFAGPYLLAHQDLLIRADDNVSKGDDLNGKKLCSVTGSTSAQNVKAKFA---PDAQLQ 172

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E     ++   DA T D S L           +  +    +S       + +GD
Sbjct: 173 QVGTYSECLNGLQSGAVDALTTDDSILAGYASQEQYKGKFKLAGLKLSNENYGIGVKKGD 232

Query: 235 TEWYNIVSWTHYAMVT 250
            E  + ++     MV 
Sbjct: 233 KEMVDKINAALEKMVQ 248


>gi|229817173|ref|ZP_04447455.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM
           20098]
 gi|229784962|gb|EEP21076.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM
           20098]
          Length = 298

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              S S  A  L +IKK G LK  + +    F  V  +G   G+D+ F   L+  +    
Sbjct: 43  TTASSSAKARTLDEIKKSGELKVAVFSDKAPFGYVDKDGKNAGYDIVFAERLAKDLGVK- 101

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++Y  ++   R   L S ++DI   N   T  R+    + F         G +  +  
Sbjct: 102 --VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENA 157

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VSQL G ++ +  GTT E      F+ +        +++  +   A    R DA++
Sbjct: 158 EITDVSQLKGKTLIIAKGTTAETY----FEKNQPDVKLQKYDQYADAYNALLDGRGDAFS 213

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A           V +  +  +  +APA+ +G+ E  N ++ 
Sbjct: 214 TDNTEVLAWA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLNWLND 259


>gi|212640131|ref|YP_002316651.1| amino acid ABC transporter periplasmic protein [Anoxybacillus
           flavithermus WK1]
 gi|212561611|gb|ACJ34666.1| ABC-type amino acid transport system, periplasmic component
           [Anoxybacillus flavithermus WK1]
          Length = 265

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 82/255 (32%), Gaps = 18/255 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   +  L +     T          +   IK++G LK G       F      G+  
Sbjct: 6   MKKWLLLIALFMFGALLTGCGQKEKENDLFAQIKEKGELKIGTEGTYPPFTFHDETGELT 65

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+  R ++  +   P    ++       F  L +K+ D+++         +      
Sbjct: 66  GFDVEIAREVAKRLGVKP---VFIETKWDAMFAGLDAKRFDMIANQVGI--RPDRQEKYD 120

Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           ++HK+   I S   + G     Q+ T+    LA  + A       +  
Sbjct: 121 FSNPYITSAAVLVVHKENKEIKSFEDIKGKK-AAQSMTSNYAELARSYGA-----EVVGV 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E   +      + R DA   D  S L  LK   D P +  I+      S       +G  
Sbjct: 175 EGFNQAIELLSSKRVDATMNDKLSVLDFLKQKPDAPIQ--IVATHDDASQSGLMFRKGSD 232

Query: 236 EWYNIVSWTHYAMVT 250
                V+     M+ 
Sbjct: 233 TLVEAVNKALKEMME 247


>gi|4204972|gb|AAD10862.1| orf J; putative ATP-binding cassette transport system; similar to
           substrate binding protein and to components of ABC
           transport systems [Leuconostoc lactis]
          Length = 279

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFT-----------SFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      + + ++              + +     +  IKK G +K  +   L  +  
Sbjct: 1   MNKKIKKFAIVITLVVGIIGFSFEHKVADAATNQGRTIKQIKKSGKIKIAVFGDLKPYGW 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  NG  +G+D++  + ++  +      ++Y+ +NA  R  AL S ++D+   N   T  
Sbjct: 61  VDKNGKRQGYDIELAKKIAKDLGVK---VKYVQVNANARVDALNSGKVDLALANFTVTPE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    ++F         G    K   I+ V+QL G ++ V  GTT E      F     
Sbjct: 118 RKEV--ISFAKPYMKVSIGVASKKTNLITKVNQLKGKNLIVNKGTTAETY----FTKEYT 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + F+   +  AA +  R DA T D S L+A     D P   V +  +  +S ++P 
Sbjct: 172 SAKLLKFDSKTQQFAALKDGRADAITDDNSYLFAW--VKDHPDYKVGIKQLGEQSYISPG 229

Query: 230 IIQGDTEWYNIVSW 243
           + +G+       + 
Sbjct: 230 VQKGNKSVLKWTNK 243


>gi|169334518|ref|ZP_02861711.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259235|gb|EDS73201.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM
           17244]
          Length = 280

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 103/258 (39%), Gaps = 15/258 (5%)

Query: 2   YKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GD 55
            K   V++  L+ L   +        N+S +  +K+ G L  G+         +    G+
Sbjct: 4   KKVMAVTMAALMSLAVFAGCGNKDNANSSEVKLVKE-GTLTVGLEASYPPMEYIDEKTGE 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD++  +A++  +     +++++ +     F  L + + D+          R+ +L 
Sbjct: 63  LAGFDIELAKAIAKDMG---LEVEFVQVGFDAIFAGLDADKYDVAISAISVNKDRQETLA 119

Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           L        + Q  I  K    I SV +LSG  + VQ GTT +     Y +   +++   
Sbjct: 120 L--SDTYLANQQVVISAKDGKQIKSVKELSGKKVAVQVGTTADEACQYYQEKEGLEFDLQ 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             + +     A ++   D    D   +      N+ P ++V   D ++  P+A A  + +
Sbjct: 178 QLDDMTAAFLALKSGNVDCVVTD--LVVGDYYVNNFPKDYVKSCDKLTNEPIAIAAKKSN 235

Query: 235 TEWYNIVSWTHYAMVTAE 252
           T     ++ +  +++ + 
Sbjct: 236 TALIAEINKSLKSLIDSG 253


>gi|292670307|ref|ZP_06603733.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Selenomonas noxia ATCC 43541]
 gi|292648038|gb|EFF66010.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Selenomonas noxia ATCC 43541]
          Length = 267

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 77/251 (30%), Gaps = 12/251 (4%)

Query: 3   KDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K          C   L        A+       +  +  G++             +  GF
Sbjct: 4   KKILTGTAVFACAAALLTGCGGDKAAAPDKGADKSKIVVGLDDNFPPMGFKNEKNEIVGF 63

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  +  +  +  +   +++  ++   +   L+S ++ IL    D T  R+    + F 
Sbjct: 64  DVDLAKEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQILWNGLDITEKRKE--NMLFS 118

Query: 120 PITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                + Q   + K     S    L+G +I VQ+ +T E          N       +  
Sbjct: 119 NPYMDNRQIIFVKKGSTAVSDEKSLAGKTIGVQSASTAEEYTDTTDFYKNEVKEVKKYPD 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEW 237
                      R DA  GD   +      +  P E   LP  +   S    A  + +T  
Sbjct: 179 YVAAFMDLENGRLDAVIGDE--IVGRYYMSKHPDELEALPIVVGPVSEFGIAFAKDNTAL 236

Query: 238 YNIVSWTHYAM 248
            + V      M
Sbjct: 237 QSEVQKVIDEM 247


>gi|307729488|ref|YP_003906712.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307584023|gb|ADN57421.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 264

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 17/247 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K  F   + LI   FT+ + +A  +L  +K+RG L+ G+      F     +G+  G+DV
Sbjct: 7   KKLF--AVALIGASFTAVAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+++ +   P    ++          LQ+ + D++      T  R+    L F P 
Sbjct: 65  DIAKAVAARLGVKPE---FITTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALDFSPA 119

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     I  K       S+  L G  + V  GT                     +   
Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGA 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   L  L   +  P       ++ + +P      + + ++  
Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGAGNPSGIPFKKNNPKFAK 232

Query: 240 IVSWTHY 246
            +     
Sbjct: 233 AIDDAMT 239


>gi|268319381|ref|YP_003293037.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           FI9785]
 gi|262397756|emb|CAX66770.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           FI9785]
          Length = 284

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 38/296 (12%)

Query: 1   MYKDFFV-------SILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44
           M K  F+        IL +  +  T+ S N+S          +  IKKRG +K  +   L
Sbjct: 1   MKKHKFIKKLIAAVGILAVGAVILTACSNNSSSNSSSNNPSSVAAIKKRGTIKVAVFGDL 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             +  V  +G   G+DV   R L+  +      ++++ +NA  R   L + + DI+  N 
Sbjct: 61  PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K K I++V+QL G  + V  GTT E    +YF
Sbjct: 118 TVTSERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            +       + F+   +   A +  R  A   D S LYA     + P   V +  +   S
Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
            +APA+ +G+    +  +             I + N +    +  N +++ + G D
Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------RINKLNKDGFFVNDYNQELKPYFGDD 274


>gi|307705123|ref|ZP_07642000.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK597]
 gi|307621319|gb|EFO00379.1| ABC transporter substrate-binding protein [Streptococcus mitis
           SK597]
          Length = 279

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 13/250 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           K   + ++ L+ LF T+ +  AS          +++G +  G +   V     + NG + 
Sbjct: 4   KKIALVLVSLLTLFLTACTQKASDPKQDNWNKYQEQGSITIGFDNTFVPMGFEEKNGQYT 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +     KIQ+ P++   +   LQ+  ID +      T  R     +A
Sbjct: 64  GFDIDLAQAVSEKLG---FKIQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K + I SV  +   ++  QAG++  L      D  K         
Sbjct: 119 FSIPYMENQQVLVAKKSQQIHSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++   E     +  R DA   D         +    +++ +          A  +   D
Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPAD 238

Query: 235 TEWYNIVSWT 244
                 ++  
Sbjct: 239 KRLLQALNQA 248


>gi|186473522|ref|YP_001860864.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184195854|gb|ACC73818.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 299

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 84/240 (35%), Gaps = 6/240 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--- 74
                 ++ L  I++ G +  G+    V F+         G+       +   +  +   
Sbjct: 21  ACAQEPSATLKKIRETGAISLGVRESSVPFSYYDEQQHVIGYSQAIALKIVDEVKKELNL 80

Query: 75  -PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              K++ +P+ ++ R   +Q+  IDI   +T  T  R+    +AF    +  G   I+ K
Sbjct: 81  PDLKVREIPITSQNRIPLVQNGTIDIECGSTTHTKERD--NQVAFSNSFFQYGVRMIVKK 138

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           + G+     L+  ++   AGT+ E  L       +M    I  +   E     +  R  A
Sbjct: 139 ESGVKDFGDLANKTVVTTAGTSEERLLRQMNAEKSMNMRLISAKDHAESFLNVKTGRAVA 198

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D   LY  K       E++I               + D  +  +       + T+ E
Sbjct: 199 FVMDDPLLYGAKAKEANADEYLITGTSPMSEVYGCMFRKDDPGFKRLTDGVIARLQTSGE 258


>gi|197334500|ref|YP_002156404.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           fischeri MJ11]
 gi|197315990|gb|ACH65437.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           fischeri MJ11]
          Length = 258

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 87/251 (34%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L   + +         K+   ++ GI      F+  + +G+ KGFD
Sbjct: 1   MKKWLLAAVVASTALTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    ++ + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTE 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K    + +   L G ++ VQ  TT +  L D F           +   
Sbjct: 107 KYALIPNKFVAKKGTDLVMTKEGLKGVTVGVQRATTHDKYLTDNF---GKGVVLKRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E     +A R D   GD SAL    L      E+  +   ++           A  + D
Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGKEYEFVGPSLTDPKWFGEGFGIATRKQD 223

Query: 235 TEWYNIVSWTH 245
            +    ++   
Sbjct: 224 KDLTEQLNAAI 234


>gi|225858524|ref|YP_002740034.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Streptococcus
           pneumoniae 70585]
 gi|225721173|gb|ACO17027.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Streptococcus
           pneumoniae 70585]
          Length = 286

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%)

Query: 1   MY--KDFFVSILCLIILFF-TSFS-------------TNASILGDIKKRGFLKCGINTGL 44
           M   K     +     L F T+ S               A  + + KK G L+  +    
Sbjct: 1   MKLFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V  +G ++G+D++    L+  +      ++Y+ ++A  R   L S ++DI   N 
Sbjct: 61  KPFDYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K   I+ V QL G ++ V  GTT E      F
Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +     +++  +   A    R DA++ D + + A     +     V +  +    
Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +A A+ +G+ E  + ++ 
Sbjct: 230 TIAAAVQKGNQELLDFINK 248


>gi|42518676|ref|NP_964606.1| glutamine ABC transporter solute-binding component [Lactobacillus
           johnsonii NCC 533]
 gi|41582962|gb|AAS08572.1| glutamine ABC transporter solute-binding component [Lactobacillus
           johnsonii NCC 533]
          Length = 274

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++++   +K+   +  G+      F  +    G  +GF+VD  +AL+  +    +K +++
Sbjct: 29  SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 88

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
               K R   L++  ID +      T  R+    + F    +  GQ  ++     I +V 
Sbjct: 89  QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDDSSIKNVR 146

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G +     GTT    +  +          + ++   +   A +A +  A T D   L
Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKA----TVLEYDDYGQAFTALKAGQGQAMTTDNGLL 202

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   N     + ++    +  P   A+ +G T++ + ++    
Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN 244


>gi|91783311|ref|YP_558517.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91687265|gb|ABE30465.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 264

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 17/251 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       + +  LI   FT+ + +A  +L  +K+RG L+ G+      F     +G+  
Sbjct: 1   MKFGLLKKILVAGLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L 
Sbjct: 61  GYDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ + +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLMKNSPLP--LRTGANVGAGNPSGIPFRKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFAKAIDDAMT 239


>gi|302524588|ref|ZP_07276930.1| glutamate-binding protein [Streptomyces sp. AA4]
 gi|302433483|gb|EFL05299.1| glutamate-binding protein [Streptomyces sp. AA4]
          Length = 276

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 92/271 (33%), Gaps = 21/271 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGD-------IKKRGFLKCGINTGLVGFAEVKANGDWKG 58
             +++  + L  +  S  +S +          +    L  GI     G ++   +G   G
Sbjct: 3   IRALVAALFLLVSCVSCGSSTVSKDDPLPTRARDGNHLTIGIRFDAPGLSQRTVDGRLAG 62

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD    ++  +  +P +I +       R   L S  +D++      T  R     ++F
Sbjct: 63  FDVDVATFVARELGVEPDRITWHETTPARRETDLTSGAVDLVVATYSITDKR--KQRVSF 120

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +  GQ  ++      I+    L+G  +C   G+T    + D F         + + 
Sbjct: 121 AGPYFVTGQDLLVRLTSPDITGPESLNGKRLCSVTGSTPAQMVKDKFAQ---MVKLVEYP 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           R  +   A  A++ DA T D   L         P    ++    S       + +GDTE 
Sbjct: 178 RYPDCVTALLANQVDAVTTDAVILAGYAAQ--NPELLKVVGRPFSAERYGIGLRKGDTEG 235

Query: 238 YNIVSWTHY------AMVTAEELGITQKNIN 262
            + V           A   + E  I   N  
Sbjct: 236 QHAVDDAIRKMVSTGAWRKSLEANIGPSNYP 266


>gi|227824559|ref|ZP_03989391.1| ABC polar amino acid transporter [Acidaminococcus sp. D21]
 gi|226905058|gb|EEH90976.1| ABC polar amino acid transporter [Acidaminococcus sp. D21]
          Length = 274

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 84/258 (32%), Gaps = 19/258 (7%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58
           M K    V +L  + +F              K+   L+ G       F   + +   + G
Sbjct: 19  MKKRTVLVGMLAALTMFAAGCGGK----DAAKESKVLRAGTEPTFAPFEFQEKDSKDFTG 74

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  RA+   +  D   ++   +       A+ S  ID+++     T  R+    + F
Sbjct: 75  FDMDLIRAIGKQMGRD---VEIKNMGFDALIPAINSGNIDVVASGMSITEERKK--AVTF 129

Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   I+      I S+  L G +I VQ GTT     A    A         F 
Sbjct: 130 SDPYYTSGLAIIVRNDENNIKSLKDLEGKTISVQIGTTGADKAASVPGAK-----VKTFN 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+         DA   D            +  +  I+ + +   P   A+ + D++ 
Sbjct: 185 TNAEVFLELNNKNADAVIIDRPVGAYFLTKEGKGQD-KIVGETMDAEPYGFAVKK-DSKL 242

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++     +    E  
Sbjct: 243 AGEINKALGELKKNGEYD 260


>gi|227890384|ref|ZP_04008189.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849198|gb|EEJ59284.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus johnsonii ATCC 33200]
          Length = 277

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++++   +K+   +  G+      F  +    G  +GF+VD  +AL+  +    +K +++
Sbjct: 32  SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 91

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
               K R   L++  ID +      T  R+    + F    +  GQ  ++     I +V 
Sbjct: 92  QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDDSSIKNVR 149

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G +     GTT    +  +          + ++   +   A +A +  A T D   L
Sbjct: 150 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 205

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   N     + ++    +  P   A+ +G T++ + ++    
Sbjct: 206 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN 247


>gi|116696426|ref|YP_842002.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113530925|emb|CAJ97272.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 274

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 85/242 (35%), Gaps = 11/242 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63
                +   +    S +  A  L DI+K G L  G+      F  V        G DVD+
Sbjct: 7   LLRGAIVAGVAVMASGTALADRLDDIRKAGVLHVGVFDANPPFGFVDPKTHAPAGLDVDY 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++S +        +   N   R   L S+++DI++ N   T  R   +G  F    +
Sbjct: 67  ANEIASRLGVKAE---FRATNPANRIPLLASQKVDIVAANFTITDERRQQIG--FSTPYF 121

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G  FI  K   +    +L    + V  GTT E TL   +         I ++      
Sbjct: 122 ASGLQFIARKG-ALRQPDELKAWRLGVDKGTTQETTLRQRYP----DARVIAYDDSPLAL 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A R     A+  D + L AL  T     +  I P  +++  +   + +G+      +  
Sbjct: 177 QALRTGAIQAFAQDGAKLGALLATLPNRDQFEISPFTLTREYMGVGVPKGEERLQAAIDQ 236

Query: 244 TH 245
             
Sbjct: 237 IL 238


>gi|312141243|ref|YP_004008579.1| high affinity substrate binding lipoprotein [Rhodococcus equi 103S]
 gi|311890582|emb|CBH49900.1| putative high affinity substrate binding lipoprotein [Rhodococcus
           equi 103S]
          Length = 327

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 10/224 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +++ L  I++RG L  G++TG    +       + +GFDVD  R ++  +   P K+++ 
Sbjct: 80  DSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTDEIEGFDVDIAREIARDLLGSPDKVEFR 139

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            LN  ER  AL+  ++DI+++    T  R     + F  + Y   Q  ++     +  VS
Sbjct: 140 VLNYAEREQALEDGRVDIVAKTMAITCER--RQRIDFSTVYYDAHQRILVMAGSPVRDVS 197

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  +CV  GTT+   +             +      +     + ++ DA + D + L
Sbjct: 198 DLAGRRVCVGEGTTSLERIER----QQPDAAVVTVPMWSDCLVMLQQNQVDAISTDDTLL 253

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L   +       I+   +        + QG+ +    V+ T 
Sbjct: 254 LGLATQDPHSR---IVGPNMGDERYGIGVAQGNEDLVRFVNGTL 294


>gi|66045739|ref|YP_235580.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|302186218|ref|ZP_07262891.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae 642]
 gi|63256446|gb|AAY37542.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 283

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +    +L  T  +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|242280829|ref|YP_002992958.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242123723|gb|ACS81419.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 273

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 9/222 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I K   ++ GI T  +  A   A  +W GFDVD    ++  +     ++    +N K 
Sbjct: 28  DRIMKDKVIRVGIMTDSIPGAFYNAKKEWVGFDVDIANEIAKRLGVKIDQVP---VNNKT 84

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R   LQ  +ID    N      R+    + F    +FDGQ  +  K    S++    G  
Sbjct: 85  RIGFLQQGRIDASVSNMTHKRSRDK--SIDFSITYFFDGQKMLAPKG-KFSTLKDFVGKK 141

Query: 148 ICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           + V  GTT+EL + +  K+        I +++  E   A +  R DA++ D + L     
Sbjct: 142 VAVMQGTTSELNVKNLLKSLGDAAPKVISYQKESECFQALQMGRVDAWSTDSTILLGYAA 201

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               P ++ ++ D  S  P    +++ D++  + V++    M
Sbjct: 202 QV--PGKYELVGDFFSNEPYGIGLVEDDSKLRDAVNFALQDM 241


>gi|317053830|ref|YP_004117855.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316951825|gb|ADU71299.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 274

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 19/260 (7%)

Query: 4   DFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
                 L ++ +           + +   S L  + +RG L+ G       F     +G+
Sbjct: 7   KIIAGALVMLAVSGCTPTEEKKDAGAAPQSALQTVLQRGTLRVGDCLSFAPFGFYDKDGN 66

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  +AL+  +      ++ +   +  R   LQ+ ++D++  N    L R   +G
Sbjct: 67  PDGYDVDLAKALAKEMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG 123

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F        +  ++ K+ GI S   ++G +I    G+T      D  ++  +      
Sbjct: 124 --FTNPYVVASEAMLVRKESGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQE 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  +    A +  + DA   D + L         P+  V    ++     A  + QGD 
Sbjct: 178 YDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLTVTNEALVPLEYNAFGVKQGDQ 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
            W N ++   + +  + E  
Sbjct: 236 VWLNYLNEFLFEINASGENA 255


>gi|223932683|ref|ZP_03624682.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
 gi|330832443|ref|YP_004401268.1| extracellular solute-binding protein family 3 [Streptococcus suis
           ST3]
 gi|223898653|gb|EEF65015.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
 gi|329306666|gb|AEB81082.1| extracellular solute-binding protein family 3 [Streptococcus suis
           ST3]
          Length = 279

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 19/256 (7%)

Query: 4   DFFVSILCLIILF--------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54
              V  L L +            +  TN+  +  I  RG L+ G+   +  F     + G
Sbjct: 13  RLLVFGLILFVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTG 72

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +++G ++D  R ++  +  D   I++ P+ A+ R   L + Q+D++      T  R+  L
Sbjct: 73  EFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNGQVDMVIATFTITEERK--L 127

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F    Y D  GF+++K  GI + + L G +I V  G+ T   ++     + +  +  
Sbjct: 128 LYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISKLADKYGISVNFA 187

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+  + RAHR DA++ D S L     +     +        S S         +
Sbjct: 188 ELGSYPELSVSLRAHRTDAFSVDQSILSGYISSKSELMDF-----SFSASDYGIVTKLSN 242

Query: 235 TEWYNIVSWTHYAMVT 250
            +  N ++        
Sbjct: 243 KDLNNYLNSLVEKWTA 258


>gi|16262719|ref|NP_435512.1| ABC transporter periplasmic substrate-binding protein
           [Sinorhizobium meliloti 1021]
 gi|14523345|gb|AAK64924.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
          Length = 265

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 10/242 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            +   + + +AS L DI  R  +  G++  +  F          G DVD  + L+  +  
Sbjct: 17  AITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGLDVDVAKLLAKDLGV 76

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           +   ++ +P+  + R  +LQ+ ++D +  +      R  +L +AF           I  K
Sbjct: 77  E---LELVPVTGQSRIPSLQTGKVDFVVASFGIYTER--ALSVAFSNPYGGHRSIIIAPK 131

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           +  I S++ L+G  + V  GT  E  L+    A+      + F+       A  + + DA
Sbjct: 132 EATIKSLADLAGKRVGVPRGTAHEKILS---AANVEGMELVRFDDDSTTLNALVSGQVDA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                     L+              + S       + + D +  + ++   +    + E
Sbjct: 189 IGTVNYIAAQLQERYPDRGFEEKTTYLQSF--YGVGLRRNDPDLLHWLNTVLFVHKQSGE 246

Query: 254 LG 255
           LG
Sbjct: 247 LG 248


>gi|32490940|ref|NP_871194.1| hypothetical protein WGLp191 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166146|dbj|BAC24337.1| fliY [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 290

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 13/253 (5%)

Query: 3   KDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           K+FF S+L   ++I FF    + AS L DIKK G L+  I      F ++        G+
Sbjct: 34  KNFFNSLLKSIILISFFIFNLSFASKLEDIKKSGLLRVAIFDSNPPFGKIDLKNHSIIGY 93

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D DF + +++ +      ++ +P N   R   LQS ++D++  +   T  RE    + F 
Sbjct: 94  DADFSKEIANILGVK---LKLIPTNPSNRIPLLQSGKVDLIIADITITKEREKV--INFS 148

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +   Q  +++K    + +   S   I    GTT + TL D           I +E +
Sbjct: 149 VPYFVTHQKLLVNKYSS-NELKDYSFDKIGAVKGTTGQKTLHDILPKA----QIISYEDI 203

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               +A R     A T D + L  L L      ++ IL + ISK  +   + +G+ +  +
Sbjct: 204 PMAFSALRNGNVKAITQDSTILSGLLLAAPDKDKYKILQETISKEVIGIGVKKGEDDLLS 263

Query: 240 IVSWTHYAMVTAE 252
            V+     +  + 
Sbjct: 264 EVNKALKILEESG 276


>gi|325673926|ref|ZP_08153616.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Rhodococcus equi ATCC 33707]
 gi|325555191|gb|EGD24863.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Rhodococcus equi ATCC 33707]
          Length = 327

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 10/224 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +++ L  I++RG L  G++TG    +       + +GFDVD  R ++  +   P K+++ 
Sbjct: 80  DSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTDEIEGFDVDIAREIARDLLGSPDKVEFR 139

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            LN  ER  AL+  ++DI+++    T  R     + F  + Y   Q  ++     +  VS
Sbjct: 140 VLNYAEREQALEDGRVDIVAKTMAITCER--RQRIDFSTVYYDAHQRILVMAGSPVRDVS 197

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  +CV  GTT+   +             +      +     + ++ DA + D + L
Sbjct: 198 DLAGRRVCVGEGTTSLERVER----QQPDAAVVTVPMWSDCLVMLQQNQVDAISTDDTLL 253

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L   +       I+   +        + QG+ +    V+ T 
Sbjct: 254 LGLATQDPHSR---IVGPNMGDERYGIGVAQGNEDLVRFVNGTL 294


>gi|218678693|ref|ZP_03526590.1| putative substrate-binding component of ABC transporter [Rhizobium
           etli CIAT 894]
          Length = 277

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 6/258 (2%)

Query: 1   MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   F   ++ L    L  T      S L ++  RG L  G  +    +    A+   +G
Sbjct: 1   MTISFRTGVMSLITAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD    ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF
Sbjct: 61  FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y +G G ++      +  + L  A   V       +       A   +     +E 
Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSVTISVLQNVYAETMVHAALPEATVDQYES 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           V+ I  A  + R DA   D S+L         P  +       +    A A+ +GD +W 
Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236

Query: 239 NIVSWTHYAMVTAEELGI 256
           N V+   +  +T  +  +
Sbjct: 237 NFVNTALHEAMTGVKFRL 254


>gi|227546749|ref|ZP_03976798.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227212711|gb|EEI80592.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 279

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +           +   +   +        + G ++ GI     G      +G + GFDVD
Sbjct: 13  RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    
Sbjct: 64  VAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +  GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E
Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  +   DA T D   L  L   +       ++    ++      I +GDT+    +
Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKI 236

Query: 242 SWTHYAMVT 250
           +     M+ 
Sbjct: 237 NNAIVDMIQ 245


>gi|116334344|ref|YP_795871.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           brevis ATCC 367]
 gi|116099691|gb|ABJ64840.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus brevis ATCC
           367]
          Length = 278

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 95/266 (35%), Gaps = 20/266 (7%)

Query: 1   MYKDFF--------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK- 51
           M K           V++  +I    ++  ++ ++    +K   +  G+      F  +  
Sbjct: 1   MKKWIRSLSLLLSLVALTAVISGCGSTALSSRNVWKTDQKSKTITWGVKADTRLFGLLDT 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G  KGF+VD  +AL+  +    +K +++ + +  R   L++  ID +      T  R 
Sbjct: 61  KDGKIKGFEVDLAKALTKQMLGKNAKAKFIQVTSSTRMPMLKNGNIDAIIATMTNTAERR 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV--QAGTTTELTLADYFKAHNM 169
               + F    ++ GQ  ++ +   I +V  L+     V    G+ +   +         
Sbjct: 121 K--QVDFSNTYFYAGQSLLVKQGSSIKNVKDLNKQKGTVLGVVGSDSVENVQKVAP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +      +   A ++ +  A T D   LY + + N     +V+        P   A
Sbjct: 175 NATVLQLTDYAQAMTALKSGQGQALTTDNGILYGMSVQNPG---YVVTGGTFVSEPYGIA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +   ++   V+     +    E  
Sbjct: 232 MDKNQQQFEAAVNQALKEVRANGEYN 257


>gi|42519232|ref|NP_965162.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           NCC 533]
 gi|41583520|gb|AAS09128.1| ABC transporter solute-binding component [Lactobacillus johnsonii
           NCC 533]
          Length = 284

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 38/296 (12%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNA--------------SILGDIKKRGFLKCGINTGL 44
           M K  F+   I  + IL   + +  A              S +  IKKRG LK  +   L
Sbjct: 1   MKKHKFIKKLIAAVGILSVGAVTLTACSNNSSSSSSSNNPSSVAAIKKRGTLKVAVFGDL 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             +  V  +G   G+DV   R L+  +      ++++ +NA  R   L + + DI+  N 
Sbjct: 61  PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F         G +  K K I++V+QL G  + V  GTT E    +YF
Sbjct: 118 TVTPERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            +       + F+   +   A +  R  A   D S LYA     + P   V +  +   S
Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
            +APA+ +G+    +  +             I + N +    +  N +++ + G D
Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------HINKLNKDGFFINDYNQELKPYFGDD 274


>gi|327390344|gb|EGE88685.1| major cell-binding factor [Streptococcus pneumoniae GA04375]
          Length = 254

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE+ + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEFNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|320530706|ref|ZP_08031750.1| Tat pathway signal sequence [Selenomonas artemidis F0399]
 gi|320136993|gb|EFW28931.1| Tat pathway signal sequence [Selenomonas artemidis F0399]
          Length = 268

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 7/243 (2%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
            +++  ++L        A+       +G +  G++             +  GFDVD  + 
Sbjct: 12  AAMMSALLLTGCGGGDKAAAPAKDGDKGKIVVGLDDNFPPMGFKDEKNEIVGFDVDLAKE 71

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
            +  +  +   +++  ++   +   L+S ++ IL    D T  R+    + F        
Sbjct: 72  AAKRLGRE---VEFKAIDWSSKEAELKSGRVQILWNGLDITEKRKE--NMLFSDPYMDSQ 126

Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           Q   + K    I+    L+G  I  Q+ +T E  +               +         
Sbjct: 127 QVIFVRKGDTAITDEQSLAGKVIGTQSASTAEEYIDATDFYKKDVKEVKKYPDFVATFMD 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               R DA  GD          +    E   +P       L  A  + +T   + V    
Sbjct: 187 LENGRLDAVVGDRIVGRYYMSKHPDKIEERNIPIGPKGE-LGIAFAKDNTALRDEVQKVM 245

Query: 246 YAM 248
             M
Sbjct: 246 NEM 248


>gi|237740706|ref|ZP_04571187.1| solute-binding protein for glutamate/aspartate ABC transporter
           system [Fusobacterium sp. 2_1_31]
 gi|229422723|gb|EEO37770.1| solute-binding protein for glutamate/aspartate ABC transporter
           system [Fusobacterium sp. 2_1_31]
          Length = 293

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 97/260 (37%), Gaps = 29/260 (11%)

Query: 2   YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43
            K   ++ + + +    +                      A  + +IK  G ++ G+ T 
Sbjct: 5   KKILKLATVGIAVFALAACGNKTEEKTEAQAPAQETAVAKARTVQEIKDSGVIRIGVFTD 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  +  NG  +G+DV F   L+  +      ++Y+ L+   R    ++ + DI++ N
Sbjct: 65  KAPFGYIDENGKNQGYDVYFTDRLAKDLGVK---VEYISLDPASRVEYAETGKADIVAAN 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +      I SV +L   ++ V  GTT E      
Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDGAVIKSVEELKDKTLIVSKGTTAEYY---- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F  ++ +     ++   +   A    R DA++ D + + A       P   V +  +   
Sbjct: 176 FSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KSNPGFTVGIDSLGDV 233

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +A A+ +G+T+  N ++ 
Sbjct: 234 DTIAVAVQKGNTDLLNWINN 253


>gi|167581949|ref|ZP_02374823.1| extracellular solute-binding protein [Burkholderia thailandensis
           TXDOH]
          Length = 271

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 91/246 (36%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M    F + L  + L     + +A  L DIKK G L+         F  V        G 
Sbjct: 1   MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ RAL+  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYARALADKLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITGERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+   I    GTT E+TL + +         + ++  
Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + +    IS   +     +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVA 230

Query: 240 IVSWTH 245
            V+ T 
Sbjct: 231 FVNDTL 236


>gi|46579379|ref|YP_010187.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603065|ref|YP_967465.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|46448793|gb|AAS95446.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563294|gb|ABM29038.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311233202|gb|ADP86056.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 272

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 14/226 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S L +I  RG L+ G + G + F     NG++ GFD+D  + ++ A+      +   
Sbjct: 28  AKKSTLNEIMARGELRVGFDAGYLPFEMTDKNGNYVGFDIDIAKEMARAMGVKFVPVN-- 85

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
             +      AL S + DI+      T  R  +L + F       GQ  ++ KK    + S
Sbjct: 86  -TDFDGMIPALLSDKFDIIISGMTVTQER--NLKINFADPYIVVGQTVLLSKKLEGKVKS 142

Query: 140 VSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              L+     V +   TT E            K     F++  +        R DA+  D
Sbjct: 143 WKDLNSPEYTVVSRLGTTGEEAAKRMLPKAKFK----SFDKEADGALEVVNGRADAWVYD 198

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +           +    V L    +  PL   I +GD ++ N ++ 
Sbjct: 199 MPFNVVFMAEQGKDKV-VHLDKPFTYEPLGFGIKKGDPDFLNFLNN 243


>gi|238797861|ref|ZP_04641353.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii
           ATCC 43969]
 gi|238718277|gb|EEQ10101.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii
           ATCC 43969]
          Length = 284

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 100/310 (32%), Gaps = 65/310 (20%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           S + +A  L DIK+ G ++  +      F  +        G+DVD   A++  +      
Sbjct: 24  SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L SK++D+++ N   T  R     + F    +  GQ FI HK   +
Sbjct: 81  VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIRKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L          +  I P  I+K      I +G+      V+ T           
Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTATVNET----------- 242

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                                + ++K     +                     ++DR  G
Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261

Query: 316 NQSELKIPRG 325
             +    PRG
Sbjct: 262 PATNAAQPRG 271


>gi|152997697|ref|YP_001342532.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150838621|gb|ABR72597.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 268

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 90/252 (35%), Gaps = 18/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K F  ++        ++   +    S L  +  RG L+     G + F      GD  
Sbjct: 1   MKKIFISALALCSATLASASDNDLWEKSTLNQVLNRGELRVCAEAGYMPFDMRDKKGDIV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  + ++ A+      +            AL + + DI+      T  R  +L + 
Sbjct: 61  GFDVDIAKTMAKAMGVK---LDIRNTAWDGIIPALLTDKCDIIISGMTITPER--NLKVN 115

Query: 118 FRPITYFDGQGFIMHK--KKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173
           F       GQ  ++    K  +++   L+    +I  + G T++  +  Y          
Sbjct: 116 FTDPYIVVGQTILLSPKFKGKVTNYRDLNDAKYTIATKLGATSDYAVKRYM----SNAKL 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +FE   E          DA+  D+         N+    H  L +  +  PL  AI +G
Sbjct: 172 NLFETESEGVLEVVNGNADAFVYDLPYNAIYSAQNEGKVVH--LDESFTYEPLGFAIRKG 229

Query: 234 DTEWYNIVSWTH 245
           D ++ N ++   
Sbjct: 230 DPDFMNFLNNYL 241


>gi|258645927|ref|ZP_05733396.1| CjaA protein [Dialister invisus DSM 15470]
 gi|260403296|gb|EEW96843.1| CjaA protein [Dialister invisus DSM 15470]
          Length = 289

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 100/259 (38%), Gaps = 27/259 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGL 44
           M K     +  + ++   +F+                     + DIK+ G L  G+ +  
Sbjct: 1   MLKKLSYILAAITLVCTMAFAAGCGSKNSDDKQAAQKASFRSIADIKQSGKLIIGVFSDK 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  +  +G+++G+DV F   L+  +        Y+ L    R    ++ ++DI+  N 
Sbjct: 61  APFGYIDKDGNYQGYDVYFAERLAKDMGVKAE---YISLEPANRVEYAKTGKVDIVLANF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R     + F         G +  KK  I+S+ QL    + V  GTT E      F
Sbjct: 118 TVTKERAE--QVDFALPYMKVALGVVSPKKDNITSIDQLKDKLLIVAKGTTAETY----F 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
             H+ +   + F++  E   A    R  A++ D + + A  +    P   V +  +    
Sbjct: 172 DKHHPEIKLLKFDQYTETFNALLDGRGAAFSTDNTEVLAWAM--KNPDFKVGITSLGDLD 229

Query: 225 PLAPAIIQGDTEWYNIVSW 243
            +APA+ +G+ E    ++ 
Sbjct: 230 TIAPAVQKGNKELLAYIND 248


>gi|54308668|ref|YP_129688.1| hypothetical protein PBPRA1475 [Photobacterium profundum SS9]
 gi|46913097|emb|CAG19886.1| hypothetical binding protein component ofABC transporter
           [Photobacterium profundum SS9]
          Length = 265

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  + ++  ++  T   IL DI K G L+   + G + F     NG + GFD
Sbjct: 1   MRKLLGGIVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +      I             L + +  +++        R  ++ + F  
Sbjct: 61  IDIGKQMARQMGVKYVPIN---TAWDGIIPTLLTGKCHMINAGMTINAQR--NMRVNFAD 115

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                GQ  +++ +    I+S   L+    +I  + GTT E  +        +     VF
Sbjct: 116 PYIVIGQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKAKLN----VF 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E   +        + DA+  D+         ND    H  L    +  PL  AI QGD++
Sbjct: 172 ETQSDAVLEVANGKADAFIYDMPFNAIYASQNDGKVIH--LEQPFTYEPLGWAIAQGDSD 229

Query: 237 WYNIVSWTH 245
             N ++   
Sbjct: 230 MLNFLNNFL 238


>gi|296162377|ref|ZP_06845170.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295887410|gb|EFG67235.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 273

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 10/255 (3%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K  +  +L L +L F   S    A  L  +K RG L  GI    V F  + + G   G
Sbjct: 1   MSKRSWWVVLMLFVLGFGGLSGGARADELEMVKARGKLIVGIRNDYVPFGYLDSKGQLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD    ++  +F   + I+++P+ A  R   L + +ID++         R     + F
Sbjct: 61  FEVDLASFVAKDLFGSETAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKV--IDF 118

Query: 119 RPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y   G   +  K   I+    L G  +C   G      L +   A       ++F 
Sbjct: 119 TNPYYMMAGMVLLAPKNTTIAKWEDLKGRKVCGSQGNMYNRALQEKLGA-----DTVLFT 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +  A++ +RC+A   D   L      +    +  I  +     P+A  + + + ++
Sbjct: 174 ATAPMYKAFQDNRCEAIAYDGPNLTLKVNEDGWKDKDKITLEAYEYVPIAGGVRKNEPKF 233

Query: 238 YNIVSWTHYAMVTAE 252
              ++ +      A 
Sbjct: 234 LAALNQSIRKAEAAG 248


>gi|294782141|ref|ZP_06747467.1| CjaA protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480782|gb|EFG28557.1| CjaA protein [Fusobacterium sp. 1_1_41FAA]
          Length = 293

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 29/260 (11%)

Query: 2   YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43
            K   ++ + + +    +                      A  + +IK  G ++ G+ T 
Sbjct: 5   KKILKLATVGVAVFALAACGNKTEEKTEAQAPAQEASVAKARTVQEIKDSGVIRIGVFTD 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  +  NG  +G+DV F   L+  +     +++Y+ L+   R    ++ + DI++ N
Sbjct: 65  KAPFGYIDENGKNQGYDVYFTDRLAKDLG---VQVEYISLDPASRVEYAETGKADIVAAN 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +      I SV +L   ++ V  GTT E      
Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDGAVIKSVEELKDKTLIVSKGTTAEYY---- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F  ++ +     ++   +   A    R DA++ D + + A       P   V +  +   
Sbjct: 176 FSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KSNPGFTVGIESLGDV 233

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +A A+ +G+T+  + ++ 
Sbjct: 234 DTIAVAVQKGNTDLLDWINN 253


>gi|152985201|ref|YP_001351134.1| putative ABC transporter binding protein subunit [Pseudomonas
           aeruginosa PA7]
 gi|150960359|gb|ABR82384.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PA7]
          Length = 266

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 89/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L +  L   + +  A  + D  KRG L+ G++   + F      G   GF+
Sbjct: 1   MKKYLASLVLGVCALLGVASAQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      ++ +  +      AL + + D++      T  R  +L L F  
Sbjct: 61  VDLLKAMAKSMGVK---LELVSTSYDGIIPALLTGKFDMIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 F
Sbjct: 116 PFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKYHG----F 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E        + DA+  D                 V L    +  PLA  + +GD +
Sbjct: 172 DNEPEAVMDVVNGKADAFIYDSPYNVVAVSKFGAGK-LVYLDQPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|296454584|ref|YP_003661727.1| family 3 extracellular solute-binding protein [Bifidobacterium
           longum subsp. longum JDM301]
 gi|296184015|gb|ADH00897.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. longum JDM301]
          Length = 279

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +           +   +   +        + G ++ GI     G      +G + GFDVD
Sbjct: 13  RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    
Sbjct: 64  VAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +  GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E
Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  +   DA T D   L  L   +       ++    ++      I +GDT+    +
Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEHYGVGIKKGDTQLATKI 236

Query: 242 SWTHYAMVT 250
           +     M+ 
Sbjct: 237 NNAIVDMIQ 245


>gi|306823262|ref|ZP_07456638.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium dentium ATCC 27679]
 gi|309801896|ref|ZP_07696011.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium
           dentium JCVIHMP022]
 gi|304553894|gb|EFM41805.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium dentium ATCC 27679]
 gi|308221452|gb|EFO77749.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium
           dentium JCVIHMP022]
          Length = 270

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 91/251 (36%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    ++     +F  S              G ++ GI     G      NG + GFD
Sbjct: 1   MLRRAVATLCACACVFAVSACGADD------ADGKIRIGIKFDQPGLGFK-KNGTYVGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +     +I +    +K+R   LQ+  +D +      T  R+    ++F  
Sbjct: 54  VDVAKYVAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAG 111

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  GQ  ++ K    I     L+G  +C   G+T+ +T+ + F +   +   +     
Sbjct: 112 PYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVIGSTSAVTVKEKFAS---EVQLMEQPGY 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +   DA T D   L  L           ++    ++      I +GDT+   
Sbjct: 169 AECATALFSGIVDAVTTDDIILAGLASAAR--GRLRVVGKPFTQEYYGVGIKKGDTQLAT 226

Query: 240 IVSWTHYAMVT 250
            ++     M+ 
Sbjct: 227 KINNDIADMIQ 237


>gi|331270073|ref|YP_004396565.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Clostridium botulinum BKT015925]
 gi|329126623|gb|AEB76568.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium botulinum BKT015925]
          Length = 265

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 87/251 (34%), Gaps = 19/251 (7%)

Query: 5   FFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
             ++ + L++L   S S ++        + L  +K  G L+ G++             + 
Sbjct: 1   MLITTMGLMLLSGCSSSKHSLGRQSGEDNSLKCMKSSGKLRIGLDDSYPPMEFRDEKNNL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D    ++  +      ++++        L LQSK+ D +      T  R+    +
Sbjct: 61  IGFDIDLSNEIAKKLGVK---VEFVTTEFNGILLGLQSKKFDAIIAGFSITEDRKK--SV 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F       GQ   + K    I  +S L    +  Q G+  +       K          
Sbjct: 116 NFSDPYVLGGQVIAVKKGNTSIKKLSDLKYKIVGCQMGSNGQNCAEKNLKDIK---ELRK 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           + ++ +  +     R DA   D  A       +  P E  +L +++ K P+  A   GD 
Sbjct: 173 YSKITQAFSDMAIGRIDAVIMD--AQVGGYYLSKNPGEFEVLNEMVVKQPMGIAFKIGDN 230

Query: 236 EWYNIVSWTHY 246
              N V     
Sbjct: 231 ALKNEVQKIVN 241


>gi|322374408|ref|ZP_08048922.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C300]
 gi|321279908|gb|EFX56947.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C300]
          Length = 279

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 14/253 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     +L L    F T+ +  AS          +K+G +  G +   V     + NG
Sbjct: 1   MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D  +A+S  +     +I++ P++   +   LQ+  ID +      T  R+   
Sbjct: 61  QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            +AF      + Q  +  K + I S+  ++   +  QAG++  L      +  K      
Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNFEGQPELLKNQVKDQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R DA   D         +    +++ +          A  + 
Sbjct: 176 KANQYQSFNEALIDLKNDRIDALVIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235

Query: 232 QGDTEWYNIVSWT 244
             D      ++  
Sbjct: 236 PADKTLLAALNQA 248


>gi|170748673|ref|YP_001754933.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655195|gb|ACB24250.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 307

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 84/226 (37%), Gaps = 7/226 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80
             L  +K    +  G     V F+ + A+    G+ +D C  ++ A+         +++ 
Sbjct: 32  GTLKKVKDANAIVIGYRDASVPFSYLGADQKPIGYAMDICYKIADAVKAKLNLPNLEVKL 91

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+ +  R   + +  ID+   +T     RE    + F    +     ++  K   + ++
Sbjct: 92  NPVTSATRIPLMANGTIDLECGSTTNNAEREK--QVWFTNSHFLTATRYVSKKSANLHTI 149

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++   +GTT    + +      +    +  +   E        R  A+  D   
Sbjct: 150 EDLKGKTVVSTSGTTNIKQINEANTERKLGLTILPAKDHAEAFLMVETGRAAAFVMDDVL 209

Query: 201 LYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTH 245
           L +L  ++  PS + I  + +SK  P    + + DTE+  +     
Sbjct: 210 LASLAASSKDPSAYEISTEALSKPEPYGIMLRKDDTEFKKVADDAT 255


>gi|194468162|ref|ZP_03074148.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
 gi|194453015|gb|EDX41913.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
          Length = 294

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 9/229 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + +      IKKRG L  G++   V     K NG   G+DVD  RA++  +        +
Sbjct: 34  ANHTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLGLKAD---F 90

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             ++   +   L++  ID +      T  R+  +   F  +    GQ  ++ K   I + 
Sbjct: 91  QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIA--FSRVYELSGQSLVVRKDSKIKNF 148

Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + + G ++ +Q  +T +     Y    K       PI+++         +A R       
Sbjct: 149 ADMKGKTLGIQESSTAQTDFDKYPQVLKRLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208

Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTH 245
                         + + ++         +A  + +GD    N +++  
Sbjct: 209 TVYAGYYATHIANSNNYKLISATKYPADRVAIGMRKGDRTLINKINYAL 257


>gi|300703462|ref|YP_003745064.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299071125|emb|CBJ42437.1| putative amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 284

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 12/233 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           A  L DIKK+G L CG+      F+ +K   + +  G+DVD C A++ ++   P      
Sbjct: 31  ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKP---VLK 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            L    R   LQ  ++D+L+ +      RE    + F   T+  GQ  ++ K  GI++++
Sbjct: 88  QLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSVSTFITGQKAMVRKDSGITTLA 145

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL G  +    G+T E  +    K        + F+   +   A +  +  AY  D + L
Sbjct: 146 QLDGKKVLTVKGSTMEANIGKAIK----NADIVSFDNSPQALLALQQGKGAAYVNDETTL 201

Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                       ++ I+P  +S   +A  I + +  +   V+     M  + E
Sbjct: 202 IGNMAKLGPASKDYAIVPQNLSTEHIALGIRKNEPAFREQVNKVLLGMEASGE 254


>gi|213691606|ref|YP_002322192.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|213523067|gb|ACJ51814.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 279

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +           +   +   +        + G ++ GI     G      +G + GFDVD
Sbjct: 13  RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    
Sbjct: 64  VAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +  GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E
Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  +   DA T D   L  L   +       ++    ++      I +GDT+    +
Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEHYGVGIKKGDTQLATKI 236

Query: 242 SWTHYAMVT 250
           +     M+ 
Sbjct: 237 NNAIVDMIQ 245


>gi|113869258|ref|YP_727747.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113528034|emb|CAJ94379.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 261

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 7/250 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++  + LF       A+          +  G++           N +  GFD
Sbjct: 1   MKKIAALLLISSVALFAACGKKEAASAAGADTATKIIVGLDDNFPPMGFRDNNNELVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +  S  +      +++ P++   +   L  K++D+L      T  R+    ++F  
Sbjct: 61  IDMAKEASRRLG---MTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NISFTA 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               + Q  I+     + + + L+G  +  Q G++    +    +          F    
Sbjct: 116 PYMTNHQIVIVGASSPVKAKADLAGRIVGAQDGSSAVDAIKKESQVAASLKELKTFGDNV 175

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D   +    L + R  E+ +L +          + + D E    
Sbjct: 176 TALMDLSTGRLDAIVVDE--VVGRYLISKRAGEYKVLEENFGTEEYGVGVRKDDAELLGK 233

Query: 241 VSWTHYAMVT 250
           +  T  +M  
Sbjct: 234 LDKTLASMKQ 243


>gi|238853885|ref|ZP_04644248.1| glutamine-binding protein [Lactobacillus gasseri 202-4]
 gi|311111030|ref|ZP_07712427.1| glutamine-binding protein [Lactobacillus gasseri MV-22]
 gi|238833471|gb|EEQ25745.1| glutamine-binding protein [Lactobacillus gasseri 202-4]
 gi|311066184|gb|EFQ46524.1| glutamine-binding protein [Lactobacillus gasseri MV-22]
          Length = 274

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +++I   +K+   +  G+      F  +    G  +GF+VD  +AL+  +    +K +++
Sbjct: 29  SSNIYEQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKNAKTEFV 88

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
               K R   L++  ID +      T  R+    + F    +  GQ  ++     I +V 
Sbjct: 89  QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDNSTIKNVK 146

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G +     GTT    +  +          + ++   +   A +A +  A T D   L
Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 202

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   N     + ++    +  P   A+ +G T++ + ++    
Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADRINKALN 244


>gi|114707671|ref|ZP_01440566.1| putative amino-acid binding periplasmic protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536915|gb|EAU40044.1| putative amino-acid binding periplasmic protein [Fulvimarina pelagi
           HTCC2506]
          Length = 264

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 17/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++   +L         S     K    +  G       F  + A+G+ +GFD
Sbjct: 1   MLKILTSTLVSTTLLAAVPALAQES--DADKDWSNIVVGTEGAYPPFNFLDASGELQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL + +  +     ++         ALQ+   D++  +   T  RE    + F  
Sbjct: 59  VDIARALCNEMGVE---CSFVTQEWDGMIPALQNGNFDLIVASMSITPEREE--QIDFTN 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+  ++  LSG +I  Q  TT      +YF           +  
Sbjct: 114 KYYNTPPAVAVLKDSDITDATEEALSGKTIGAQVSTTHARAAEEYFP----DAEVRQYPS 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGD 234
            EE      + R DA   D+  L     +           +   + I    +   + + +
Sbjct: 170 AEEYKLDIESGRVDAVLDDVVVLDQWLKSEAGACCKLLGTLPAEEQIYGEGIGIGLRKDN 229

Query: 235 TEWYNIVSWTHYAM 248
            +   +V+    A+
Sbjct: 230 EKLQGMVNEAIAAI 243


>gi|83745986|ref|ZP_00943042.1| Amino-acid ABC transporter binding protein ybeJ precursor
           [Ralstonia solanacearum UW551]
 gi|207741994|ref|YP_002258386.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           IPO1609]
 gi|83727380|gb|EAP74502.1| Amino-acid ABC transporter binding protein ybeJ precursor
           [Ralstonia solanacearum UW551]
 gi|206593380|emb|CAQ60307.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           IPO1609]
          Length = 299

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 94/252 (37%), Gaps = 7/252 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +   + +       +   L  I++ G ++       V F+     G   G+ +D C 
Sbjct: 10  LAVLAVPLAVSAVHAMASTPTLDRIRETGNIRLAYREDSVPFSYTDG-GKPIGYSIDICS 68

Query: 66  ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +  A    +     K+QYLP+ A  R   + S + D+   +T      +    +AF   
Sbjct: 69  RVVDAIRTSLKRPELKVQYLPVTAANRMDTIASGKADLECGST--NNAPDRREKVAFTIP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y      ++    G+     L G ++    G++    +     A  M    +    ++ 
Sbjct: 127 HYITKGRMLVKASSGLQQWEDLHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTNDLKT 186

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +   + + DA+ GD   L  ++ T+D P+E+V+       S  A  + + D E+  ++
Sbjct: 187 AFSMLSSGKADAFAGDDVLLAGMRATSDNPTEYVVAGKTQLVSSYAMMMSKQDAEFKKLI 246

Query: 242 SWTHYAMVTAEE 253
             +   ++   E
Sbjct: 247 DQSMTRLIVDGE 258


>gi|187923719|ref|YP_001895361.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187714913|gb|ACD16137.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 264

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 17/251 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       + +  LI   FT+ + +A  +L  +K+RG L+ G+      F     +G+  
Sbjct: 1   MKIGLLKKILVAGLIGASFTAVAAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L 
Sbjct: 61  GYDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQANKFDVIVNQVGITDARK--QALD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ + +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLMKNSQLP--LRTGANVGAGNPSGIPFRKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFAKAIDDAMT 239


>gi|291548166|emb|CBL21274.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Ruminococcus sp. SR1/5]
          Length = 296

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 83/260 (31%), Gaps = 17/260 (6%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K     ++   +   +  T  S  A +         L  G +     F     NG++ 
Sbjct: 1   MKKRTVAVVMAAAMTIGMMVTGVSVQAGVEDK-----TLIVGFDAEYPPFGYKDDNGEYV 55

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  + +   +  +  K    P+N   + + L S  ID +          +      
Sbjct: 56  GFDLDLAQEVCDNLGWELVK---KPINWDSKDMELNSGTIDCIWNGFTINGRED---DYT 109

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIV 175
           +      + Q  ++ K   I  ++ L G ++ VQA +     L   D  +  +       
Sbjct: 110 WSDPYINNEQVIVVAKDSEIEKLADLKGKNVVVQAASAALDALNNDDNKELKDSFASLTE 169

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                       +   DA   DI           +   +VIL + I          +G+ 
Sbjct: 170 NPDYNTAFMNIDSGAADAVAVDIGVANYQLSQRGKDK-YVILDEPIQNEQYGIGFKKGND 228

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E  ++V      +  + E+ 
Sbjct: 229 ELKDLVWDEVKKLDESGEVD 248


>gi|111023727|ref|YP_706699.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1]
 gi|110823257|gb|ABG98541.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1]
          Length = 277

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 9/246 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++ L ++                  G L  GI     G      +G + GFDV+    
Sbjct: 11  IGVMALAVVASACGGGEEKSASQSASEGKLTVGIKYDQPGLGLRNPDGSFSGFDVEVAEY 70

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +   P  +++    + +R   +++ ++D +      T  R+    + F    +  G
Sbjct: 71  VAGKLGVAPENVEFKESPSAQRETLIENGEVDYIVATYSITDARKE--KVDFAGPYFIAG 128

Query: 127 QGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           Q  ++       +       G  +C   G+T    + D +           F+       
Sbjct: 129 QSLLVKSDNTDITGPDSLNGGKKLCSVTGSTPAQKVKDTYAQ---DVQLQEFDTYSACVE 185

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A R    DA T D   L         P E  ++ +  ++      + +GD E    ++  
Sbjct: 186 ALRNGAVDAVTTDDIILAGYAAQY--PGELKVVGEPFTEERYGIGLAKGDDETRAKINDA 243

Query: 245 HYAMVT 250
             AM+ 
Sbjct: 244 IDAMIA 249


>gi|311106237|ref|YP_003979090.1| extracellular solute-binding protein, family 3 family protein 5
           [Achromobacter xylosoxidans A8]
 gi|310760926|gb|ADP16375.1| bacterial extracellular solute-binding protein, family 3 family
           protein 5 [Achromobacter xylosoxidans A8]
          Length = 263

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 87/253 (34%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDWK 57
           M K   V +     L      ++ +     +       +  G++          +N    
Sbjct: 1   MKKLTAVLLASATALLTACGPSDNAPAAGAQAPAAAKKVVVGLDDNFPPMGFRDSNNQIV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +  S  +     ++++ P++   +   L  K++D+L      T  R+    ++
Sbjct: 61  GFDIDMAKEASKRLG---LEVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NIS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F      + Q  I+     +   + L+G  +  Q G++    +A    A  +K     F 
Sbjct: 116 FTAPYMANHQIIIVGNASPVKLKADLAGKVVGAQDGSSATDAIAKDPVAAQIK-EVKKFG 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R DA   D   +    L + R  E+ +L +          + + DTE 
Sbjct: 175 DNVTALMDLAAGRLDAIVVDE--VVGRYLISKRAGEYRVLDENFGTEDYGVGVRKDDTEL 232

Query: 238 YNIVSWTHYAMVT 250
              +  T  +M  
Sbjct: 233 LGKLDKTLDSMKQ 245


>gi|295681020|ref|YP_003609594.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295440915|gb|ADG20083.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 266

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 80/250 (32%), Gaps = 14/250 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      ++ L +    FT+ + +A  +L  +K+ G LK G+      F     +G  +G
Sbjct: 1   MKLSKLLINALAISAFSFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGQLEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  +A+++ +   P    ++P        ALQS + D++      T  R     L F
Sbjct: 61  FDVDVAKAVAAKLGVKPE---FIPTEWSGIIAALQSGKFDVIINQVTITPQR--KQVLDF 115

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                +     I          S+ +  G         T      D         +   +
Sbjct: 116 SQPYTYSAAQLIQRADDKREFKSLDEFKGDKKIGVTLGTNY----DQMARAVPGINVQTY 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E      A R DA   D   L  +   +  P     +     +  +     + + +
Sbjct: 172 PGAPEKLRDLAAKRIDATIDDRLMLPYIIKNSQLPLRTGAVLKGADQE-MGIPFRKDNPK 230

Query: 237 WYNIVSWTHY 246
           +   +     
Sbjct: 231 FAKALDDALT 240


>gi|83719161|ref|YP_442971.1| extracellular solute-binding protein [Burkholderia thailandensis
           E264]
 gi|167620111|ref|ZP_02388742.1| extracellular solute-binding protein [Burkholderia thailandensis
           Bt4]
 gi|257139195|ref|ZP_05587457.1| extracellular solute-binding protein [Burkholderia thailandensis
           E264]
 gi|83652986|gb|ABC37049.1| extracellular solute-binding protein [Burkholderia thailandensis
           E264]
          Length = 271

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 91/246 (36%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M    F + L  + L     + +A  L DIKK G L+         F  V        G 
Sbjct: 1   MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ RAL+  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYARALADKLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITGERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+   I    GTT E+TL + +         + ++  
Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + +    IS   +     +G+T    
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVA 230

Query: 240 IVSWTH 245
            V+ T 
Sbjct: 231 FVNDTL 236


>gi|218886440|ref|YP_002435761.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218757394|gb|ACL08293.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 272

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 82/228 (35%), Gaps = 14/228 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S L +I  RG L+ G + G + F     NG++ GFD+D  + L+ A+      +   
Sbjct: 28  AKKSTLNEIMARGELRVGFDAGYMPFEMTDKNGNYVGFDIDLAKELAKAMGVKFVPVN-- 85

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
             +      AL S + DI+      T  R  +L + F       GQ  I+ KK    + +
Sbjct: 86  -TDFDGMIPALLSDKFDIIISGMTVTQER--NLRINFANPYIVVGQSVIVSKKHEGKVKT 142

Query: 140 VSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              L+     V +   TT E            K     FE+  +        + DA+  D
Sbjct: 143 WEDLNKPEYTVVSRLGTTGEEAAKRMLPKAKYK----SFEKEADGALEVINGKADAWVYD 198

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +           +    + L    +  PL   I +GD ++ N +    
Sbjct: 199 MPFNVVFMAEQGKGKA-IHLDKPFTYEPLGFGIKKGDPDFLNFLDNFL 245


>gi|310640485|ref|YP_003945243.1| amino acid abc transporter [Paenibacillus polymyxa SC2]
 gi|309245435|gb|ADO55002.1| Amino acid ABC transporter [Paenibacillus polymyxa SC2]
          Length = 255

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 101/286 (35%), Gaps = 33/286 (11%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   F  ++ LI++     S         K    L  GI+           N +  GF
Sbjct: 1   MRKAAMFTMMIGLIMIVLAGCSGG-------KDNSKLIIGIDDKFAPMGFRDENNELTGF 53

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D+ +A    +     ++++ P++   +   L S +ID++      T  R+    + F 
Sbjct: 54  DIDYAKAAGEQMGK---QVEFQPIDWSAKESELNSGRIDLIWNGYTITDERKE--KVLFT 108

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                + Q  ++     +S ++ L+G ++ +Q  ++    L D     +       +   
Sbjct: 109 KPYLKNSQVIVVPATSSLSKLADLAGKTVGLQTLSSAADAL-DANPIKSKLKSVSEYPDN 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  +  R DA   D   + A    +     + +L + ++       + +G+ E   
Sbjct: 168 VLALTDLKTGRLDAVVIDE--VVAKYYMSKEQGTYKLLDESLAPEEYGIGVKKGNEELLT 225

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSN 284
            +                    +++ K+    ++ +++ G DK  N
Sbjct: 226 QLQSAL----------------DELHKNGKAAEISKKWFGEDKVLN 255


>gi|227878270|ref|ZP_03996234.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus crispatus JV-V01]
 gi|256844164|ref|ZP_05549651.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256850464|ref|ZP_05555891.1| amino acid ABC transporter [Lactobacillus crispatus MV-1A-US]
 gi|262047797|ref|ZP_06020748.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           crispatus MV-3A-US]
 gi|293381401|ref|ZP_06627400.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
 gi|312976723|ref|ZP_07788472.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           crispatus CTV-05]
 gi|227862140|gb|EEJ69695.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus crispatus JV-V01]
 gi|256614069|gb|EEU19271.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256712669|gb|EEU27663.1| amino acid ABC transporter [Lactobacillus crispatus MV-1A-US]
 gi|260571926|gb|EEX28496.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           crispatus MV-3A-US]
 gi|290922009|gb|EFD99012.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
 gi|310896051|gb|EFQ45116.1| glutamine ABC transporter, substrate binding protein [Lactobacillus
           crispatus CTV-05]
          Length = 271

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 12/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +L L +      S             I  +  +  G++   V     K NG 
Sbjct: 1   MKKWILGIVLALTLCLTGCQSVQKEANTQDTWNKIASKKQVVIGLDDSFVPMGFEKKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+         K+ +  ++       L++  ID+L      T  R+    
Sbjct: 61  LTGYDIDLAKAVFKQYG---IKVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERQK--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF      + Q  ++ K   ISS  Q+    + +Q G+T E          + K   ++
Sbjct: 116 VAFSKPYLRNRQVLVVKKDSDISSFKQMKNYELGMQTGSTAEQWYETKQDVLHAKKT-VL 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234
           ++ +        A R      D            + SE+ ++  D +     A  + +GD
Sbjct: 175 YDTISNSFLDLNAGRIQGILLDEVYADYYIAHMAKSSEYKVIQNDRVPMDLFAVGMRKGD 234

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 235 KTLRQKVNQGL 245


>gi|168482841|ref|ZP_02707793.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC1873-00]
 gi|172043606|gb|EDT51652.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC1873-00]
          Length = 254

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  N +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNNYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|296131957|ref|YP_003639204.1| extracellular solute-binding protein family 3 [Thermincola sp. JR]
 gi|296030535|gb|ADG81303.1| extracellular solute-binding protein family 3 [Thermincola potens
           JR]
          Length = 274

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 77/222 (34%), Gaps = 7/222 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
              +K++G    G++            G+  GFDVD  + ++S +      ++  P+N  
Sbjct: 37  WEKVKEKGEFVLGLDENFPPMGFRDEKGEIVGFDVDVAKEVTSRLGVK---LKLQPINWD 93

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            +   L +  ID +      T   +    + F      + Q  I+      ++++ L+G 
Sbjct: 94  AKEQELNTGNIDAIWNGFTITE--DRKQNVLFSKPYMKNRQVIIVMNNSNFTNLADLAGK 151

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            + +QAG++    LA            + F+              DA   D   +    +
Sbjct: 152 KLGLQAGSSAADALAGAKDFKAKLGEVVEFDDNMTALMDLEKGGIDAVLMDE-IVARYYI 210

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T      + +L + ++         + D +    +  T  AM
Sbjct: 211 TMKNKG-YKVLDEALASEEYGIGFRKNDKQLMEKIQRTLEAM 251


>gi|300362319|ref|ZP_07058495.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus gasseri JV-V03]
 gi|300353310|gb|EFJ69182.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus gasseri JV-V03]
          Length = 263

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 6/244 (2%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
             +  +      S    IK+RG L  G++   V     + NG   GFDVD   A+   I 
Sbjct: 17  ASIGLSGCQRQESSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKKIG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             P    +  ++   +   L++  ID++      T  R     +AF      + Q  +  
Sbjct: 77  LKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSQPYLENDQILVTR 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAHRC 191
           KK  I +  Q+ G  + VQ G++    L +Y      +    ++++         +A R 
Sbjct: 132 KKDKIDNYRQMKGKVLGVQTGSSGADDLDNYPNVLKKRVKSIVLYDTYNNAFIDLKAGRI 191

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                D          +    E        S    +  I + D    + ++     +   
Sbjct: 192 TGLLIDGVYANYYLAHSKYQKEFKKEKLPYSSEKFSVGINKKDKILKDKINQALEHLEKT 251

Query: 252 EELG 255
            EL 
Sbjct: 252 GELE 255


>gi|289424115|ref|ZP_06425901.1| amino acid ABC transporter, substrate-binding protein
           [Peptostreptococcus anaerobius 653-L]
 gi|289155540|gb|EFD04219.1| amino acid ABC transporter, substrate-binding protein
           [Peptostreptococcus anaerobius 653-L]
          Length = 264

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 8/251 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  +I     +  ++       K    +  G++   V    +    +  GFD+
Sbjct: 7   KKLMAVGLGLVIATSLVACKSSEKKADSAKSSKEIVVGLDNTFVPMGFLDEKNELVGFDI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +     +  +P   ++  ++   +  +L++K +D L      T  R+    +AF   
Sbjct: 67  DLAKEAFKRMGLEP---RFENIDWSTKEQSLENKNVDALWNGYSITEQRKE--KVAFSTP 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERV 179
              + Q  +  KK  I +   L    +  QAG+ +   +    +         P  ++  
Sbjct: 122 YLDNKQIVVSMKKDNIKTFKDLKDKQVGTQAGSASLDAIEANKEFTGLIKGSEPTTYDTF 181

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R  A  GD   L    +      ++ +L   + K        + DT+   
Sbjct: 182 DKALRDLEIGRTKAVVGDEVLL-KYYIKQRGADKYQVLDGDLGKEQYGVGFRKDDTKRVE 240

Query: 240 IVSWTHYAMVT 250
             +     M  
Sbjct: 241 EFNKVLKEMQE 251


>gi|229490811|ref|ZP_04384646.1| glutamate binding protein [Rhodococcus erythropolis SK121]
 gi|229322201|gb|EEN87987.1| glutamate binding protein [Rhodococcus erythropolis SK121]
          Length = 276

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 10/259 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F + I+ +                     G L  GI     G  +   +G + GFDV+ 
Sbjct: 8   RFGIGIMAIAFAATACGGGEEKSASQSAADGTLTVGIKFDQPGLGQRNPDGTFSGFDVEV 67

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            R +++ +   P  I +    + +R   +Q+ ++D +      T  R+  +G  F    +
Sbjct: 68  ARYIANELGVKPEGITFKESPSAQRETLIQNGEVDYIVATYSITDARKEKVG--FAGPYF 125

Query: 124 FDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             GQ  ++       +       G  +C   G+T    + D             F+    
Sbjct: 126 IAGQSLLVRSDNTDITGRDSLSGGKKLCSVTGSTPAQKVKDSVP----DVQLQEFDTYSA 181

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R    DA T D   L         P +  ++ +  +       + + D+E    +
Sbjct: 182 CVEALRNGAVDAVTTDDIILAGFAAQY--PGQLKVVGEPFTTENYGVGLAKDDSETRGKI 239

Query: 242 SWTHYAMVTAEELGITQKN 260
           +     M++         N
Sbjct: 240 NDAIEKMISTGAWEEAFNN 258


>gi|288561033|ref|YP_003424519.1| amino acid ABC transporter substrate-binding protein
           [Methanobrevibacter ruminantium M1]
 gi|288543743|gb|ADC47627.1| amino acid ABC transporter substrate-binding protein
           [Methanobrevibacter ruminantium M1]
          Length = 274

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 81/258 (31%), Gaps = 15/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGFAEVKAN 53
           M K   + +   ++ F    +++A  L                  G +     +     N
Sbjct: 1   MKKKIAIILGIALLAFLVIGASSAGFLDFLGGDGTATNDDNTFIVGFDAEFPPYGYKDDN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G++ GFD+D  + +      +   +   P++   +   L S  ID +          +  
Sbjct: 61  GEYVGFDLDLAQEVCDR---NNWTLVKQPIDWDAKDSELDSGSIDCIWNGFTINGRED-- 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYH 172
               +      + Q  ++    GI+S++ L G  +  Q  ++    L  D     +    
Sbjct: 116 -DYTWSEPYIDNKQVVVVKTDSGINSLADLDGKIVETQKDSSALAALEGDNKTLADTFKD 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                             CDA   DI      +++     ++ +L + IS         +
Sbjct: 175 LTQVADYNTAFMDLETGACDAVAIDIGV-AQYQISQKGSDQYKMLDEEISSEQYGIGFKK 233

Query: 233 GDTEWYNIVSWTHYAMVT 250
           G+ +  + V  T   M  
Sbjct: 234 GNDQLKDQVQKTLDEMFE 251


>gi|219670552|ref|YP_002460987.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
 gi|219540812|gb|ACL22551.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
          Length = 274

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 93/261 (35%), Gaps = 20/261 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-------------LKCGINTGLVGF 47
           M K   V++  L+     +   ++S  GD  + G              +  G++      
Sbjct: 1   MKKWVAVAMTVLMSGLLLAGCGSSSSAGDANEPGKANTEPEKGAVQQKIVIGLDDTFAPM 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G+  GFDVD  + ++S +     ++++ P++   + + L SK+ID++      T
Sbjct: 61  GFRDDGGNLVGFDVDMAKEVASRL---DMEVEFKPIDWNSKEVELNSKKIDMIWNGLTIT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R     +AF      + Q  ++     I + + L+G  +  Q G+++   L    +  
Sbjct: 118 KER--LEKIAFSKPYMANRQIVVVLSGSDIKTKADLAGKVVGTQEGSSSVDALNAEPEVT 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                   +     +       R +A  GD   L      N +P     + D   +    
Sbjct: 176 GTFKELRTYADFVAVLNELSIGRVEAVVGDEVVL--KYYMNKKPGTFAAIEDNFGEEEYG 233

Query: 228 PAIIQGDTEWYNIVSWTHYAM 248
             + + DTE    +     AM
Sbjct: 234 VGLRKDDTELLGKLQGALDAM 254


>gi|301793800|emb|CBW36191.1| putative glutamine-binding protein precursor [Streptococcus
           pneumoniae INV104]
          Length = 254

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|237745206|ref|ZP_04575687.1| amino acid transporter [Fusobacterium sp. 7_1]
 gi|229432435|gb|EEO42647.1| amino acid transporter [Fusobacterium sp. 7_1]
          Length = 291

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 96/258 (37%), Gaps = 27/258 (10%)

Query: 2   YKDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINTGLV 45
            K   ++ + + +    +                    A  + +IK  G ++ G+ T   
Sbjct: 5   KKILKLATVGVAVFALVACGNKTEETKTEAPAQETTAKARTVQEIKDSGVIRIGVFTDKA 64

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F  V  NG  +G+DV F   L+  +      ++Y+ L+   R    ++ + DI++ N  
Sbjct: 65  PFGYVDENGKNQGYDVYFTNRLAKDLGVK---VEYISLDPASRVEYAETGKADIVAANFT 121

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T  R     + F         G +   K  I S+ +L   ++ V  GTT E      F 
Sbjct: 122 VTPERAE--KVDFSLPYMKVSLGVVSPDKAVIKSIDELKDKTLIVSKGTTAEYY----FS 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
            +  +     ++   +   A    R DA++ D + + A       P   V +  +     
Sbjct: 176 KNYPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KANPGFTVGIDSLGDIDT 233

Query: 226 LAPAIIQGDTEWYNIVSW 243
           +A A+ +G+ +  + ++ 
Sbjct: 234 IAVAVQKGNKDLLDWINN 251


>gi|284033844|ref|YP_003383775.1| extracellular solute-binding protein family 3 protein [Kribbella
           flavida DSM 17836]
 gi|283813137|gb|ADB34976.1| extracellular solute-binding protein family 3 [Kribbella flavida
           DSM 17836]
          Length = 326

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 9/223 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            S +  IK++G L+ GI+   +         G  +GFD+D  R ++ AIF DP+K++ + 
Sbjct: 76  GSTMAKIKQQGRLRAGISADSLNLGSRNPITGAIEGFDIDMVREVARAIFGDPNKVELVV 135

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +++ +R   LQ   +DI++RN      R     +AF    Y  GQ  ++ +     +++ 
Sbjct: 136 ISSPQRIPVLQQNTVDIVARNMTINCAR--WQQIAFSAEYYRSGQKVLVQRDSTARTLAD 193

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G +IC  AG+T+   L  ++        PI  +        ++  +    TGD + L 
Sbjct: 194 LPGRTICAPAGSTSLDNLKKFYPE----VKPITADTDTGCLVLFQQGKAYGITGDDTVLA 249

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   P   ++     S+ P    + + + ++   V+   
Sbjct: 250 GEAAQ--DPYAKILPEPPFSQEPYGLGMNKDEVDFVQFVNGVL 290


>gi|227534089|ref|ZP_03964138.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239629876|ref|ZP_04672907.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301066997|ref|YP_003789020.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|227188270|gb|EEI68337.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239527488|gb|EEQ66489.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300439404|gb|ADK19170.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 274

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 9/226 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +  IL   K    +  G+      F  +    G  +GFDVD  +A++  I     K Q 
Sbjct: 29  ADRDILTTAKTTNTIVWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +  R   ++   +D +      T  R+    L F  + +  GQ  ++ K   I SV
Sbjct: 89  VQVTSDTRVPMIKGGNVDAVIATMTITPERQKI--LDFSDVYFNAGQSILVKKGSPIKSV 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L   +  +    +      D  K        +      +   A ++ + DA T D   
Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNGI 203

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           LY +   +     +++     +K P   AI +G   +   V+    
Sbjct: 204 LYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVNKAIK 246


>gi|170692242|ref|ZP_02883405.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170142672|gb|EDT10837.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 264

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 17/247 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K  FV+   +I   FT+   +A  +L  +K+RG L+ G+      F     +G+  G+DV
Sbjct: 7   KKLFVA--AMIGASFTAIPAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+++ +   P    ++          LQ+ + D++      T  R+    L F P 
Sbjct: 65  DIAKAVAAKLGVKPE---FITTEWSGIIAGLQAGKFDVIVNQVGITDARK--QSLDFSPA 119

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     I  K       S+  L G  + V  GT                     +   
Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGA 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   L  L   +  P       ++ + +P      + + ++  
Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGAGNPSGIPFKKNNPKFAK 232

Query: 240 IVSWTHY 246
            +     
Sbjct: 233 AIDDAMT 239


>gi|302540998|ref|ZP_07293340.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302458616|gb|EFL21709.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Streptomyces himastatinicus ATCC 53653]
          Length = 274

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 83/225 (36%), Gaps = 11/225 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +     S L  + + G L+         F         +GFDVD  +A++ A+      +
Sbjct: 35  ASRAQDSTLQKVTRSGTLRVASCLTFPPFGSTDKANKPQGFDVDVAKAMAKALGVK---V 91

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + +   +  R   L++ ++D +  N   T  R   +   F       G+  ++ K   I+
Sbjct: 92  KIVDTTSANRIPNLRTHKVDAVVCNFTTTAERAKQVA--FSDPYIVAGEVLMVKKSSAIA 149

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+  LSG  + V  G+T    +    K  N K     ++       A +  + DA   + 
Sbjct: 150 SLKDLSGKKVAVTKGSTNGAAV----KEGNPKARIQEYDTSAAAVLAVKQGQADAMV-ED 204

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           S     +     PS  V    ++     A  + QGD +W   ++ 
Sbjct: 205 SNFLNYQAKL-DPSLKVTKDSVVPLEYNAIGVGQGDPDWLQWINT 248


>gi|22126343|ref|NP_669766.1| cystine transporter subunit [Yersinia pestis KIM 10]
 gi|45441366|ref|NP_992905.1| cystine transporter subunit [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596053|ref|YP_070244.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 32953]
 gi|108807218|ref|YP_651134.1| cystine transporter subunit [Yersinia pestis Antiqua]
 gi|108812438|ref|YP_648205.1| cystine transporter subunit [Yersinia pestis Nepal516]
 gi|149366208|ref|ZP_01888243.1| putative cystine-binding periplasmic protein [Yersinia pestis
           CA88-4125]
 gi|153949990|ref|YP_001401243.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 31758]
 gi|162420780|ref|YP_001606501.1| cystine transporter subunit [Yersinia pestis Angola]
 gi|165925949|ref|ZP_02221781.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938780|ref|ZP_02227335.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010832|ref|ZP_02231730.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166210652|ref|ZP_02236687.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401164|ref|ZP_02306667.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420150|ref|ZP_02311903.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425781|ref|ZP_02317534.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170024601|ref|YP_001721106.1| cystine transporter subunit [Yersinia pseudotuberculosis YPIII]
 gi|186895159|ref|YP_001872271.1| cystine transporter subunit [Yersinia pseudotuberculosis PB1/+]
 gi|218928965|ref|YP_002346840.1| cystine transporter subunit [Yersinia pestis CO92]
 gi|229896294|ref|ZP_04511464.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229897231|ref|ZP_04512387.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229897958|ref|ZP_04513109.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902811|ref|ZP_04517928.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270486600|ref|ZP_06203674.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294503991|ref|YP_003568053.1| putative cystine-binding periplasmic protein [Yersinia pestis
           Z176003]
 gi|21959325|gb|AAM86017.1|AE013849_8 putative periplasmic cysteine-binding ABC transport protein
           [Yersinia pestis KIM 10]
 gi|45436226|gb|AAS61782.1| putative cystine-binding periplasmic protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51589335|emb|CAH20957.1| putative cystine-binding periplasmic protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776086|gb|ABG18605.1| cystine-binding periplasmic protein [Yersinia pestis Nepal516]
 gi|108779131|gb|ABG13189.1| putative cystine-binding periplasmic protein [Yersinia pestis
           Antiqua]
 gi|115347576|emb|CAL20486.1| putative cystine-binding periplasmic protein [Yersinia pestis CO92]
 gi|149292621|gb|EDM42695.1| putative cystine-binding periplasmic protein [Yersinia pestis
           CA88-4125]
 gi|152961485|gb|ABS48946.1| cystine-binding periplasmic protein FliY [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353595|gb|ABX87543.1| cystine-binding periplasmic protein FliY [Yersinia pestis Angola]
 gi|165913394|gb|EDR32016.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922153|gb|EDR39330.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990176|gb|EDR42477.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207832|gb|EDR52312.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961845|gb|EDR57866.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049553|gb|EDR60961.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055180|gb|EDR64977.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751135|gb|ACA68653.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis YPIII]
 gi|186698185|gb|ACC88814.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680258|gb|EEO76357.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229688999|gb|EEO81064.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693568|gb|EEO83617.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701217|gb|EEO89246.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262361824|gb|ACY58545.1| putative cystine-binding periplasmic protein [Yersinia pestis
           D106004]
 gi|262366040|gb|ACY62597.1| putative cystine-binding periplasmic protein [Yersinia pestis
           D182038]
 gi|270335104|gb|EFA45881.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294354450|gb|ADE64791.1| putative cystine-binding periplasmic protein [Yersinia pestis
           Z176003]
 gi|320015413|gb|ADV98984.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 266

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +        +L  +K+RG L  G+      F+    +G   GF
Sbjct: 7   RRRIVLGMVAVALATGLNVKSYAAGDLLEQVKQRGTLIVGLEGTYPPFSFQGEDGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L+SK+ID+       +  R+      F 
Sbjct: 67  EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      +    L G  + V  G+  E  L +  K          ++
Sbjct: 122 TPYTVSGIQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQWLRENLK----DVDIRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L         +     ++     A+ + + E 
Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDALAVAGPAFARQESGVAMRKNNPEL 235

Query: 238 YNIVSWTH 245
              V+   
Sbjct: 236 LAAVNNAI 243


>gi|330427594|gb|AEC18928.1| extracellular solute-binding protein [Pusillimonas sp. T7-7]
          Length = 268

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 81/248 (32%), Gaps = 11/248 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
             +    +    S +  A  + ++K++G L  G+      +  +       G+D D  R 
Sbjct: 14  ALLATCTVFALGSSAAVAETIDEVKEKGELTVGMLVDFPPYGILNTENKPDGYDADVARQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +      +  +P+    R   L + ++D+L  +   T  R   +   F        
Sbjct: 74  LAKELGVK---VNIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQ--FSDPYSAAQ 128

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K   I+    LSG  I V   +T ++ +           +   F+       A 
Sbjct: 129 IVVFGGKDTKIAKAEDLSGLRIGVARASTQDIAVTKISPK---DANIRRFDDDASAMQAL 185

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + + DA     S   A ++    P        ++ +  +A A+  G+      V+    
Sbjct: 186 LSGQVDAI--GCSTTVAGQIAKRSPDRFENKFVLLQQE-MAVAMRPGEPNTLKAVNEAVE 242

Query: 247 AMVTAEEL 254
             +   E 
Sbjct: 243 KNIKNGEF 250


>gi|222083302|ref|YP_002542705.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221738682|gb|ACM39520.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 272

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 87/254 (34%), Gaps = 10/254 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61
           K   ++    + L        A  L DIK +G L CG       F+    +     G+DV
Sbjct: 2   KILTLATTSALALIVGFGPALADRLDDIKTKGLLVCGTVPNYEPFSFPDPSTRQLVGYDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DFC A++  +       +   ++   R   L   ++DIL+ +  +TL R     + +   
Sbjct: 62  DFCEAIAGKLGVK---FEMKTMSNDARIPELTEGRVDILTADLGYTLTRAE--QINYSYG 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +       +   +G + +  L+G  I V  G+T+E  +    +      + + F+    
Sbjct: 117 YFMVPHRVAVRADRGFADLKSLAGKRIAVIKGSTSEGFVRKSVE----NVNVVTFDDAPT 172

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A    + D ++        L       +   ++   +        + +G+      V
Sbjct: 173 GFLALVQGKVDGFSASFLVNARLISKAGDAAPLKLVDQAVGTETWGIGVRKGEDRLLGAV 232

Query: 242 SWTHYAMVTAEELG 255
                 +  + E  
Sbjct: 233 DKALVDLDNSGEAE 246


>gi|300692873|ref|YP_003753868.1| amino-acid ABC transporter binding protein ybeJ [Ralstonia
           solanacearum PSI07]
 gi|299079933|emb|CBJ52610.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia
           solanacearum PSI07]
          Length = 299

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 95/252 (37%), Gaps = 7/252 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +   + +       +   L  I+  G ++       V F+  +A G   G+ +D C 
Sbjct: 10  LAVLAIPLAVSTVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYSEA-GKPIGYSIDICS 68

Query: 66  ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +  +    +     K+QY+P+ A  R   + S + D+   +T      +    +AF   
Sbjct: 69  RVVESIRTSLKRPELKVQYVPVTAVNRMDTIASGKADLECGST--NNAPDRREKVAFTIP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y      ++    G+     L G ++    G++    +     +  M  H +    ++ 
Sbjct: 127 HYITKGRMLVKASSGLQQWDDLHGKTVVAARGSSASDVMHKLNDSTGMGMHTVDTNDLKT 186

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             A     + DA+ GD   L  ++ T+D PSE+V+       S  A  + + D E+  +V
Sbjct: 187 AFAMLSTGKADAFAGDDVLLAGMRATSDNPSEYVVAGKTQLVSSYAMMLSKQDAEFKKLV 246

Query: 242 SWTHYAMVTAEE 253
             +   ++   E
Sbjct: 247 DQSMTRLIVDGE 258


>gi|293605337|ref|ZP_06687722.1| amino acid ABC superfamily ATP binding cassette transporter
           [Achromobacter piechaudii ATCC 43553]
 gi|292816276|gb|EFF75372.1| amino acid ABC superfamily ATP binding cassette transporter
           [Achromobacter piechaudii ATCC 43553]
          Length = 264

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 22/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTS---------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K   V ++    +                 A  +        +  G++          
Sbjct: 1   MKKLTAVFLVSATTMLTACGPSDDAKPTAGAQAPAMAK-----KVVVGLDDNFPPMGFRD 55

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           A+    GFDVD  +  S  +  +   +++ P++   +   L  K++D+L      T  R+
Sbjct: 56  ASNQIVGFDVDMAKEASKRLGVE---VEFKPIDWSAKEAELNGKRVDVLWNGLTITEERK 112

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               ++F      + Q  I+     +   + L+G ++  Q G++    +A    A  +K 
Sbjct: 113 K--NISFTAPYMANHQIIIVGTASPVKVKNDLAGKTVGAQDGSSATDAIAKDPVAAQIK- 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               F           A R DA   D   +    L + R  E+ +L +          + 
Sbjct: 170 EVKKFGDNVTALMDLAAGRLDAIVVDE--VVGRYLISKRTGEYRVLDENFGTEDYGVGVR 227

Query: 232 QGDTEWYNIVSWTHYAMVT 250
           + DTE    +  T  +M  
Sbjct: 228 KDDTELLGKLDKTLDSMKQ 246


>gi|262068036|ref|ZP_06027648.1| CjaA protein [Fusobacterium periodonticum ATCC 33693]
 gi|291378258|gb|EFE85776.1| CjaA protein [Fusobacterium periodonticum ATCC 33693]
          Length = 293

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 29/260 (11%)

Query: 2   YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43
            K   ++ + + +    +                      A  + +IK  G ++ G+ T 
Sbjct: 5   KKILKLATVGVAVFILAACGNKTEEKTEAQAPAQEASVAKARTVQEIKDSGVIRIGVFTD 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  +  NG  +G+DV F   L+  +  +   ++Y+ L+   R    ++ + DI++ N
Sbjct: 65  KAPFGYIDENGKNQGYDVYFTDRLAKDLGVN---VEYISLDPASRVEYAETGKADIVAAN 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +      I SV +L   ++ V  GTT E      
Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDGAVIKSVEELKDKTLIVSKGTTAEYY---- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F  ++ +     ++   +   A    R DA++ D + + A       P   V +  +   
Sbjct: 176 FSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KSNPGFTVGIESLGDV 233

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +A A+ +G+T+  + ++ 
Sbjct: 234 DTIAVAVQKGNTDLLDWINN 253


>gi|330966438|gb|EGH66698.1| cystine transporter subunit [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 268

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 77/246 (31%), Gaps = 9/246 (3%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +                   AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKAKVQPSK---WDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S   LSG  + V  GT  E  L    KA+        +E   
Sbjct: 124 TISGIQALVLKKNADTIKSAKDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    R DA   D  A   +         E     +  S+     A+ +G+ E   
Sbjct: 180 TKIQDLSVGRIDAILVDRLAALEIAAKTKNTKRELAPAGEAFSRQESGIALRKGEPELLA 239

Query: 240 IVSWTH 245
            +    
Sbjct: 240 AIDKAI 245


>gi|226306244|ref|YP_002766204.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus
           erythropolis PR4]
 gi|226185361|dbj|BAH33465.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus
           erythropolis PR4]
          Length = 278

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 88/267 (32%), Gaps = 14/267 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGD 55
           M   +     I  + I F  +          I +    G L  GI     G  +   +G 
Sbjct: 1   MKINRSVRFGIGIMAIAFAATACGGGEENKSITESASDGTLTVGIKFDQPGLGQRNPDGT 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFDV+  R +++ +   P  I +    + +R   +Q+ ++D +      T  R+    
Sbjct: 61  FSGFDVEVARYIANELGVKPEGITFKESPSAQRETLIQNGEVDYIVATYSITDTRKE--K 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           ++F    +  GQ  ++       +       G  +C  +G+T    + D +         
Sbjct: 119 VSFGGPYFIAGQSLLVRSDNTDITGPDSLTGGKKLCSVSGSTPAQNIQDNYAK---DVQL 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +       A R    DA T D   L         P E  ++ +  +       + + 
Sbjct: 176 QPLDTYSACVEALRNGAVDAVTTDDIILAGYAAQY--PGELKVVGEPFTTEKYGVGLAKD 233

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKN 260
           D+E    ++     M++         N
Sbjct: 234 DSEGRGKINDAIEKMISTGAWEEAFNN 260


>gi|239620726|ref|ZP_04663757.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|312132337|ref|YP_003999676.1| hisj1 [Bifidobacterium longum subsp. longum BBMN68]
 gi|239516302|gb|EEQ56169.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|311773858|gb|ADQ03346.1| HisJ1 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 279

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +           +   +   +        + G ++ GI     G      +G + GFDVD
Sbjct: 13  RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    
Sbjct: 64  VAKYVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +  GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E
Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  +   DA T D   L  L   +       ++    ++      I +GDT+    +
Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKI 236

Query: 242 SWTHYAMVT 250
           +     M+ 
Sbjct: 237 NNAIVDMIQ 245


>gi|21228041|ref|NP_633963.1| glutamine-binding protein [Methanosarcina mazei Go1]
 gi|20906474|gb|AAM31635.1| Glutamine-binding protein [Methanosarcina mazei Go1]
          Length = 284

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 96/289 (33%), Gaps = 30/289 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----------------GDIKKRG----FLKCG 39
           M K   +  +   ++F    +                        ++   G        G
Sbjct: 4   MLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTYIVG 63

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
                  F  V + G   GFDVD   A++        K+QYL  +      ALQ+  IDI
Sbjct: 64  TEAQFPPFEIVDSRGKVVGFDVDLLNAIAED---QGFKVQYLDQDFAGLIPALQTGNIDI 120

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTEL 158
           ++     T  RE    + F       G    +    + I SV+ L G ++ VQ G+T  +
Sbjct: 121 IASGMTITEERE--QEVDFSEPYITAGLALAVPINNEEIQSVADLQGKTVAVQTGSTGFM 178

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
             A+  K   +      F  V E     +    D    D+    A      +P    I+ 
Sbjct: 179 K-AEELKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAA--QPDVIKIVG 235

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
           + ++      A+  G+TE    ++     +  + E      N+ +  ++
Sbjct: 236 EPLNSESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE 284


>gi|116629192|ref|YP_814364.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           gasseri ATCC 33323]
 gi|116094774|gb|ABJ59926.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus gasseri ATCC 33323]
          Length = 277

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +++I   +K+   +  G+      F  +    G  +GF+VD  +AL+  +    +K +++
Sbjct: 32  SSNIYEQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKNAKTEFV 91

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
               K R   L++  ID +      T  R+    + F    +  GQ  ++     I +V 
Sbjct: 92  QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDNSTIKNVK 149

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G +     GTT    +  +          + ++   +   A +A +  A T D   L
Sbjct: 150 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 205

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   N     + ++    +  P   A+ +G T++ + ++    
Sbjct: 206 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADRINKALN 247


>gi|320457693|dbj|BAJ68314.1| glutamate ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 266

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++ L  +    +  +  A       + G ++ GI     G      +G + GFDVD  +
Sbjct: 1   MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    +  
Sbjct: 54  YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111

Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E   
Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A  +   DA T D   L  L   +       ++    ++      I +GDT+    ++  
Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEHYGVGIKKGDTQLATKINNA 226

Query: 245 HYAMVT 250
              M+ 
Sbjct: 227 IVDMIQ 232


>gi|295426474|ref|ZP_06819124.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus amylolyticus DSM 11664]
 gi|295063842|gb|EFG54800.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus amylolyticus DSM 11664]
          Length = 271

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/284 (19%), Positives = 110/284 (38%), Gaps = 21/284 (7%)

Query: 1   MYK--DFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K     + +L  +++F  +  T  N +    +K+   +  GI      F       G 
Sbjct: 1   MKKLKKIILLMLGFMMVFALAGCTKKNDNTYEHVKQSKTIVWGIRADTRLFGLTNIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF++D  +AL+  +    +  ++L   A  R   L++  +D +      T  R     
Sbjct: 61  IEGFEIDLAKALTKQMLGSSAHAEFLTTTANTRIPLLKNHNVDAVLATMTITKERAK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  G   ++     I++V QL+G ++    GTT    +  Y          + 
Sbjct: 119 VDFTNPYFPAGSSLLVPNSSKITNVKQLNGKTVLAVKGTTAVDDVHKYAPKAK----VLQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++   +  +A +A +  A T D   L  +    + P  + ++  + + +P   AI +G T
Sbjct: 175 YDDYGQAMSALKAGQGVALTTDNGLLAGIAQ--ENPG-YKLVGGVYTNAPYGIAINKGQT 231

Query: 236 EWYNIVSWTHYAMVTAEELGITQKN--INQVSKDTTNPDVQRFL 277
           +  N ++        AE       N  IN+  K     DV+  L
Sbjct: 232 QMVNHLNTAL-----AELKKNGTYNRLINKWFKGIPGFDVKELL 270


>gi|326318880|ref|YP_004236552.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375716|gb|ADX47985.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 303

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 9/242 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFD---- 73
               A  +  I++   +  G+      F+ V A   G   G+ VD C+A+   I +    
Sbjct: 24  AQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEDIKNTLKL 83

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++Y P++A ER   L++ +ID+   +T  T  R+  +   F P  +  G   ++ K
Sbjct: 84  KDLEVKYRPVSAAERIPKLEAGEIDLECGSTTNTKARQERVA--FGPTMFVAGIRVLVPK 141

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                +V  L+G ++ V  G+T+E  L     A+ +K    VF+  +E   A RA    A
Sbjct: 142 GTKADTVQDLAGMTVAVSKGSTSEKLLTQ-LTANEVKATVKVFDNNDEAFKALRAGTVKA 200

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D S L  L   N       +   ++S  P A  + + DT    +V  T   + T+ E
Sbjct: 201 FAQDDSLLLGLVARNKAQDALALSNFVLSVEPYAIMVRKSDTALMAVVDRTLGKLYTSRE 260

Query: 254 LG 255
           + 
Sbjct: 261 ID 262


>gi|300313535|ref|YP_003777627.1| amino acid ABC transporter/signal transduction system periplasmic
           protein/domain-containing protein [Herbaspirillum
           seropedicae SmR1]
 gi|300076320|gb|ADJ65719.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 260

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 88/245 (35%), Gaps = 10/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  L    + F++    A  L DI+K G L+  +      F  V A+   +G D
Sbjct: 1   MKLTKLLLGLMAGAMMFSASVARADALDDIQKHGTLRVAVPADFPPFGSVDADLKPQGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +      ++ +P+++  R   L +K++D++  +      RE    + F  
Sbjct: 61  IDVATLIAKKLGVK---VELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKV--IDFSA 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G        + S + L+G +I V  G+  +L L     A         +E   
Sbjct: 116 AYAPFFNGVFGPADLSVKSAADLAGKTIAVTRGSVEDLELTKIVPA---SATVKRYEDNN 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +++ + +            A+      P +      +I  SP    + +G+ +  + 
Sbjct: 173 STISSFLSGQVQLVATGNVVAAAIIAR--NPPKKPETKFLIKDSPCFIGLNKGEKKLQDK 230

Query: 241 VSWTH 245
           V    
Sbjct: 231 VDAIL 235


>gi|315613066|ref|ZP_07887977.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
 gi|315315176|gb|EFU63217.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
          Length = 279

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 14/253 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     +L L    F T+ +  AS          +K+G +  G +   V     + NG
Sbjct: 1   MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D  +A+S  +     +I++ P++   +   LQ+  ID +      T  R+   
Sbjct: 61  QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            +AF      + Q  +  K + I S+  ++   +  QAG++  L      +  K      
Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNFEGQPELLKNRVKDQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R DA   D         +    +++ +          A  + 
Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235

Query: 232 QGDTEWYNIVSWT 244
             D    + ++  
Sbjct: 236 PADKTLLDSLNQA 248


>gi|299783155|gb|ADJ41153.1| ABC transporter substrate binding component [Lactobacillus
           fermentum CECT 5716]
          Length = 284

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/291 (21%), Positives = 114/291 (39%), Gaps = 30/291 (10%)

Query: 1   MYK--DFFVSILCLI----ILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     V +L ++    ++ F   S+       S +  IKKRG+++  +   L  +  
Sbjct: 1   MKKIQKLIVGLLTVLSIFSLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGW 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   G+DV   R ++  +      ++++ +NA  R   L S + D++  N   T  
Sbjct: 61  VNKDGKRVGYDVRLARQIAKDLGVK---VKFVQVNANNRVDTLNSNKADLVLANFTVTDE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   I+ VSQL   SI +  GTT E           +
Sbjct: 118 R--KQVIDFAKPYMKVSIGVVSLKSDPITKVSQLKNKSIIINKGTTAENYFVSNQSKLGI 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K   + F+   +   A +  R +A   D S LYA       P   V +  +     ++PA
Sbjct: 176 K-SILKFDTKTQQFNALKNKRANALADDNSYLYAW--VKKNPKYTVGIKTLGPSQDISPA 232

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
           + +G+    N  +             IT+ N +   K   N +++ + G +
Sbjct: 233 VKKGNKSLLNWTNK-----------EITKLNKDGFFKTDFNKELKPYFGSE 272


>gi|189438884|ref|YP_001953965.1| amino acid ABC transporter periplasmic protein [Bifidobacterium
           longum DJO10A]
 gi|189427319|gb|ACD97467.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium longum DJO10A]
 gi|291516218|emb|CBK69834.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
          Length = 279

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +           +   +   +        + G ++ GI     G      +G + GFDVD
Sbjct: 13  RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    
Sbjct: 64  VAKYVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +  GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E
Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  +   DA T D   L  L   +       ++    ++      I +GDT+    +
Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKI 236

Query: 242 SWTHYAMVT 250
           +     M+ 
Sbjct: 237 NNAIVDMIQ 245


>gi|298529733|ref|ZP_07017136.1| extracellular solute-binding protein family 3 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511169|gb|EFI35072.1| extracellular solute-binding protein family 3 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 260

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 91/252 (36%), Gaps = 22/252 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F+++ L L+     + ++ A        R  ++ G       F  + + G+ KGFD
Sbjct: 1   MRRFFYITALVLLGCMLLAGTSLA--------RDKVRIGTEGAYPPFNYMDSQGNLKGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL  A      + +++  +      AL ++  D +  +   T  R+    + F  
Sbjct: 53  IDIAKALCEAA---NLECEFVTQSWDGIIPALLARDYDAIIASMSITEERKR--RVDFTE 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+ HK + I  S   L G S+ VQ  T +   + D F   +       +   
Sbjct: 108 KYYQTPARFVKHKDRDIEISKDDLEGLSVGVQRATVSANFINDNF---DDVLDIRSYATQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           EE +    + R D    D   L    L ++    +  +    +           A+ QGD
Sbjct: 165 EEANMDIVSGRVDLLFADAVVLQTGFLDSEEGQNYEFVGPSYTDEEWFGEGIGIALRQGD 224

Query: 235 TEWYNIVSWTHY 246
            +     +    
Sbjct: 225 DDLRETFNQAIQ 236


>gi|238793125|ref|ZP_04636753.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia
           ATCC 29909]
 gi|238727498|gb|EEQ19024.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia
           ATCC 29909]
          Length = 284

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 100/310 (32%), Gaps = 65/310 (20%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           S + +A  L DIK+ G ++  +      F  +        G+DVD   A++  +      
Sbjct: 24  SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L SK++D+++ N   T  R     + F    +  GQ FI HK   +
Sbjct: 81  VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L          +  I P  I+K      I +G+      V+ T           
Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTASVNET----------- 242

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                                + ++K     +                     ++DR  G
Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261

Query: 316 NQSELKIPRG 325
             +    PRG
Sbjct: 262 PATNAAQPRG 271


>gi|325517962|gb|EGC97786.1| polar amino acid transporter substrate-binding protein
           [Burkholderia sp. TJI49]
          Length = 264

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 82/251 (32%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKFSLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L 
Sbjct: 61  GFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QTLD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSTAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 QFQKAIDDAMT 239


>gi|170744198|ref|YP_001772853.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168198472|gb|ACA20419.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 298

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 92/252 (36%), Gaps = 7/252 (2%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           VS   ++    T  S  +  L  IK  G +  G     + F+ +  +    GF +D C  
Sbjct: 10  VSCALVLSFATTVASAESPTLTKIKSNGSVTLGYREASIPFSYLGTDQKPVGFSLDLCAQ 69

Query: 67  LSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           + +     +  D   ++  P+++  R   +Q+  ID+    T  ++ R   +   F    
Sbjct: 70  VVAKIKSDLKLDTLAVKLQPVDSTNRIPLIQNGTIDMECGATSSSVARLKQVA--FTVAI 127

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +     ++     GI  V  L G ++ V    +  +  A   KA    ++ I  +   E 
Sbjct: 128 FVSSARWLTKVSSGIHDVKDLDGKTV-VATQGSNAVGFAFGIKAKGGTFNVIQAKDHGES 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               ++ R  A+  D   L +LK     P+    LP+  +  P    + + D E   +  
Sbjct: 187 MLTLQSGRAAAFMEDDILLASLKARTPDPAAFAFLPETYTLVPYGLMLPRDDVELKALAD 246

Query: 243 WTHYAMVTAEEL 254
                M+ +   
Sbjct: 247 GVLKDMMASGAF 258


>gi|322689657|ref|YP_004209391.1| glutamate ABC transporter substrate-binding protein
           [Bifidobacterium longum subsp. infantis 157F]
 gi|320460993|dbj|BAJ71613.1| glutamate ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis 157F]
          Length = 266

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++ L  +    +  +  A       + G ++ GI     G      +G + GFDVD  +
Sbjct: 1   MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    +  
Sbjct: 54  YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111

Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E   
Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A  +   DA T D   L  L   +       ++    ++      I +GDT+    ++  
Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226

Query: 245 HYAMVT 250
              M+ 
Sbjct: 227 IVDMIQ 232


>gi|209547540|ref|YP_002279458.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538784|gb|ACI58718.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 261

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 94/283 (33%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F +I  L   F  S +++A  L DI  RG L+  +      F  V  +    G+D+D
Sbjct: 4   RRVFFAIATLAATFGISSTSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      +    + +  R   LQ+ ++D++  +      RE    + F    
Sbjct: 64  VANLIAEKLGVKTELVP---VTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSAAY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G        I+    L+G SI V  G   +L L     A         +E     
Sbjct: 119 APFFNGVFAPADLSIAKAEDLAGKSIAVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A+ + + D          A+      P +   L  +I  SP    + +        V+
Sbjct: 176 ISAFLSGQVDTVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQAALLEKVN 233

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
               A  T   L                   Q++LG D  S++
Sbjct: 234 GIIAAAKTDGALNSIS---------------QKWLGTDLPSDL 261


>gi|148983989|ref|ZP_01817308.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|147924136|gb|EDK75248.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|301799655|emb|CBW32215.1| putative glutamine-binding protein precursor [Streptococcus
           pneumoniae OXC141]
          Length = 254

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLVAAKPVQANTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIHYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|292558665|gb|ADE31666.1| Major cell-binding factor precursor (CBF1) [Streptococcus suis GZ1]
          Length = 279

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 105/268 (39%), Gaps = 28/268 (10%)

Query: 1   MYKD-------FFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTG 43
           M K          + +  LI+L F           +  TN+  +  I  RG L+ G+   
Sbjct: 1   MDKKKINIFFAIRLLVFGLILLVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQD 60

Query: 44  LVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           +  F     + G+++G ++D  R ++  +  D   I++ P+ A+ R   L + Q+D++  
Sbjct: 61  VPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNSQVDMVIA 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R+  L   F    Y D  GF+++K  GI + + L G +I V  G+ T   +++
Sbjct: 118 TFTITEERK--LLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISE 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
               + +  +        E+  + RAHR D ++ D S L     +     +        S
Sbjct: 176 LADKYGITVNFAELGSYPELSVSLRAHRTDTFSVDQSILAGYISSKSELMDF-----SFS 230

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            S         + +  N ++        
Sbjct: 231 ASDYGIVTKLSNKDLNNYLNSLVEKWTA 258


>gi|184155299|ref|YP_001843639.1| ABC transporter substrate binding component [Lactobacillus
           fermentum IFO 3956]
 gi|227514602|ref|ZP_03944651.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus fermentum ATCC 14931]
 gi|260662187|ref|ZP_05863083.1| ABC transporter substrate binding component [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226643|dbj|BAG27159.1| ABC transporter substrate binding component [Lactobacillus
           fermentum IFO 3956]
 gi|227087013|gb|EEI22325.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus fermentum ATCC 14931]
 gi|260553570|gb|EEX26462.1| ABC transporter substrate binding component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 284

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/291 (21%), Positives = 114/291 (39%), Gaps = 30/291 (10%)

Query: 1   MYK--DFFVSILCLI----ILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     V +L ++    ++ F   S+       S +  IKKRG+++  +   L  +  
Sbjct: 1   MKKIQKLIVGLLTVLSIFSLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGW 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   G+DV   R ++  +      ++++ +NA  R   L S + D++  N   T  
Sbjct: 61  VNKDGKRVGYDVRLARQIAKDLGVK---VKFVQVNANNRVDTLNSNKADLVLANFTVTDE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R     + F         G +  K   I+ VSQL   SI +  GTT E           +
Sbjct: 118 R--KQVVDFAKPYMKVSIGVVSLKSDPITKVSQLKNKSIIINKGTTAENYFVSNQSKLGI 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K   + F+   +   A +  R +A   D S LYA       P   V +  +     ++PA
Sbjct: 176 K-SILKFDTKTQQFNALKNKRANALADDNSYLYAW--VKKNPKYTVGIKTLGPSQDISPA 232

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
           + +G+    N  +             IT+ N +   K   N +++ + G +
Sbjct: 233 VKKGNKSLLNWTNK-----------EITKLNKDGFFKTDFNKELKPYFGSE 272


>gi|167628320|ref|YP_001678819.1| amino acid abc transporter, amino acid-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167591060|gb|ABZ82808.1| amino acid abc transporter, amino acid-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 273

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 82/249 (32%), Gaps = 12/249 (4%)

Query: 1   MYKDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   +    ++   +++       NA        +  +  G       F      G+ 
Sbjct: 13  MNKWMRIGCTAALAAGLLVSLAGCGGNAPA-TTATAKKKIVVGTEATYRPFEWKDEQGEI 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  R +   I  +   ++            LQ++ ID+++     T  R+ S+G 
Sbjct: 72  IGFDVDLAREIGKEIGVE---VEIKNTPFDNLIAELQNQSIDMIASAMTITEKRKESIG- 127

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y   Q  I+ +   I +++ L   ++ VQ GTT                    F
Sbjct: 128 -FSKPYYDSVQAIIVKEGSPIKTLADLKDKNVGVQNGTTGMGVAEKLLGER--STRIKRF 184

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E + +     R    DA   D        + N      ++    + K     A+ +GD E
Sbjct: 185 ETLPDALNTLRIDGLDAVIADKPVAQNYLVNNPDAKLLILEDTSLEKEQFGFAVRKGDRE 244

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 245 LQQQINDAL 253


>gi|172060526|ref|YP_001808178.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171993043|gb|ACB63962.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 264

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +        ++          LQ+ + D+++     T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228

Query: 236 EWYNIVSWTHYAMVTAE 252
           ++   +     A + A+
Sbjct: 229 KFQKAIDDAM-AQLEAD 244


>gi|302023815|ref|ZP_07249026.1| extracellular amino acid-binding protein [Streptococcus suis
           05HAS68]
 gi|330832845|ref|YP_004401670.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           ST3]
 gi|329307068|gb|AEB81484.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           ST3]
          Length = 266

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 16/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   ++   L  L   + S+  + S L  IK++G L    +     F     V    +
Sbjct: 1   MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+   + ++  +      ++   ++      ++Q+ + DI      ++  R     
Sbjct: 61  VVGADIMLAQKIADELGVK---LEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKV-- 115

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      ++ K     ++S+  +SG ++ VQ G+T E    +     N     
Sbjct: 116 FDFSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQESYAQENISQAN----L 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     ++ + DA   D          N   +   +    I ++    A+ +G
Sbjct: 172 ISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKG 231

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
            TE    +      +  ++E  
Sbjct: 232 STELKTAIDKVIAEVKASDEFD 253


>gi|322411893|gb|EFY02801.1| amino acid ABC transporter, extracellular amino acid-binding
           protein [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 277

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 14/268 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +   +  L  I L   +       + +       +K   +  G +   V       +G
Sbjct: 1   MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKNITLGFDNTFVPMGYKDESG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           D KGFD+D  +A+          + +  +N   +   L++ +ID++      T  R+   
Sbjct: 61  DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNSKIDMIWNGYSMTQERQA-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171
            +AF      + Q  ++ K  GI+  S +    +  Q+G++    L  + K         
Sbjct: 116 KVAFTVPYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLIKDQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   +     + +R D    D           ++  ++ ++         A  + 
Sbjct: 176 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 235

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259
           + D      ++     M    E     +
Sbjct: 236 KEDKTLQKKINEALKKMYQDGEFQAISQ 263


>gi|194288892|ref|YP_002004799.1| glutamate/aspartate ABC transporterperiplasmic binding component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193222727|emb|CAQ68730.1| glutamate/aspartate ABC transporter,periplasmic binding component
           [Cupriavidus taiwanensis LMG 19424]
          Length = 303

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 7/233 (3%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74
               + +   L  IK  G +  G     + F+      +  G+  +    +   +  +  
Sbjct: 25  GAVHAADGDTLKKIKDSGVISLGYRESSIPFSYTDGK-EVMGYSHEILLQIVDKVKSELK 83

Query: 75  --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +++  P+ ++ R   +Q+  IDI   +T   L R+  +   F    +  G   +  
Sbjct: 84  MPNLQVRLTPITSQNRIPLVQNGTIDIECGSTTNNLERQKQVA--FSNSLFVYGIKMLTK 141

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K  G+   + L   ++   AGTT E  L        M  + I  +   +        R  
Sbjct: 142 KDSGVKEFADLKDRNVVTTAGTTGERLLVKMNGEKAMNMNLISTKDHGQSFLILETGRAA 201

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A+  D   LY  +      ++ V++   +     A    + D  +  +     
Sbjct: 202 AFVMDEPLLYGERTKAKNAADWVVVGAPLQTENYACMFRKDDPSFKKLADGVI 254


>gi|293365297|ref|ZP_06612014.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|307703837|ref|ZP_07640778.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|291316747|gb|EFE57183.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|307622672|gb|EFO01668.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 279

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 14/253 (5%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     +L L   FF  + +  AS          +K+G +  G +   V     + NG
Sbjct: 1   MKRKKIALVLALFFSFFLIACTQKASDPSQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D  +A+S  +     +I++ P++   +   LQ+  ID +      T  R+   
Sbjct: 61  QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATNERKE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            +AF      + Q  +  K + I S+  ++   +  QAG++  L      +  K      
Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMADKVLGAQAGSSGYLNFEGQPELLKNRVKDQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R DA   D         +    +++ +          A  + 
Sbjct: 176 KANQYQSFNEALIDLKNDRIDALVIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235

Query: 232 QGDTEWYNIVSWT 244
             D    + ++  
Sbjct: 236 PADKTLLDALNQA 248


>gi|313673708|ref|YP_004051819.1| amino acid abc transporter substrate-binding protein, paat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940464|gb|ADR19656.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 264

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F   I+  ++          S L  I KRG +K G++T  V +A    +G+W GF+
Sbjct: 1   MKRIFLALIMIFMLFATGFAEDKKSTLDSIIKRGKMKVGMST-FVPWAMQTKSGEWIGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L+  +      I+++P        +L +   DI+      T  R  +L + F  
Sbjct: 60  IDVAKRLAKDMG---VGIEFVPTKWSGIIPSLLTGNYDIIIGGMGITPER--ALKVEFSI 114

Query: 121 ITYFDGQGFI-MHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
              + G   +    K   +S+ +L+   + + A   TT   T   +F          +F+
Sbjct: 115 PYDYSGMAIVANRSKTKANSLKELNNPDVTIVARLGTTAAETAKKFFPRA----QLKLFD 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +        R  A+         L + +     +  +    +K P+  A+ +GD E+
Sbjct: 171 DEPQAIQELLNGRATAFISSAPLPAFLAIDHS-SKLYQPVKGTFTKEPIGFAVRKGDQEF 229

Query: 238 YNIVSWTHYAM 248
            N ++     +
Sbjct: 230 LNYLNSWITVV 240


>gi|296274226|ref|YP_003656857.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098400|gb|ADG94350.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 271

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     ++   +    S       S L  + +RG L+  +  G + F      G   G
Sbjct: 1   MKKMLLAILVFATVNLVASDINLWKNSTLNKVLERGELQVCLEPGYMPFEMKDKKGRIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DVD  + ++  +      ++ LP        AL + + DI+      T  R  +L + F
Sbjct: 61  YDVDVAQLMAKEMGVK---LKLLPTAWDGIIAALVTGKCDIIISGMTVTQQR--NLKVNF 115

Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPI 174
                  GQ  +M+K  +  I S  +L      +     T+ E+ +  ++K        +
Sbjct: 116 ADPYLVVGQTVLMNKSLEGKIKSAKELDNPKYTIVTKLGTSAEIAIRKFYKKAK----IV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            FE   +  +    +  DA+  D      L + +    + V L   ++  PLA AI +GD
Sbjct: 172 TFETEADAVSEVLNNNADAFVYDQP-YNILFMADKGKGKLVHLDTPLTFEPLAWAIRKGD 230

Query: 235 TEWYNIVSWTH 245
            ++ N ++   
Sbjct: 231 PDFLNWLNNFL 241


>gi|86360893|ref|YP_472780.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86284995|gb|ABC94053.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 261

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 95/283 (33%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F +I  L   F  +  ++A  L DI  RG L+  +      F  V  +    G+D+D
Sbjct: 4   RRIFFAIATLAATFGFNAPSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      +    + +  R   LQ+ ++D++  +      RE    + F    
Sbjct: 64  MANLIAEKLGVKAELVP---VTSANRVPYLQTNKVDLVISSLGKNPEREKV--IDFSVAY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G        ++    L+G SI V  G   +L L     A         +E     
Sbjct: 119 APFFNGVFGPADLSVAKAEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A+ + + D          A+      P +   L  +I  SP    + +  +     V+
Sbjct: 176 ISAFLSGQVDIIATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQSALLEKVN 233

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
               A                 +  T N   Q++LG D  S++
Sbjct: 234 GIVAA---------------AKADGTLNAISQKWLGADLPSDL 261


>gi|330941851|gb|EGH44588.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 283

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +    +L  T  +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPVNSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|331003781|ref|ZP_08327275.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412164|gb|EGG91559.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 281

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 84/266 (31%), Gaps = 25/266 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS--TNASILGDIKK----------------RGFLKCGINT 42
           M K + + IL   +L   S +    +S     K                 +     G + 
Sbjct: 1   MKKMYLLGILAAFVLAGCSSAKPAESSSADTSKAETTVAGETTTAAVTDSKNTFTVGFDQ 60

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
                  V  +G++ GFD++    ++  +  +   I+Y P+    + + L S  ID +  
Sbjct: 61  DFPPMGFVGDDGEFTGFDLELAAEVAKRLGKE---IKYQPIAWDAKDMELSSGTIDCIWN 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
                   +      +      + Q F++     I S+  L+G ++ VQA ++ E  L +
Sbjct: 118 GFSIQGREDK---YTWSKPYMNNEQVFVVKSDSSIESIEDLAGKTVEVQADSSAEAALKE 174

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             +  +                       DA   D S +   ++T        +L   +S
Sbjct: 175 NTELASTFGKLQTVADYNTGFMDLDMGGVDAIAMD-SVVANYQITKRGGEGFTVLDTPLS 233

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAM 248
                     G+    + V      M
Sbjct: 234 TEEYGIGFKLGNEALRDEVQKALDEM 259


>gi|158313076|ref|YP_001505584.1| extracellular solute-binding protein [Frankia sp. EAN1pec]
 gi|158108481|gb|ABW10678.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec]
          Length = 323

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 89/227 (39%), Gaps = 9/227 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S +  ++  G +  G       F      G+ +GFDV+  R ++ A+     K++++ 
Sbjct: 73  AGSTMAKLQSAGTITVGTKFDQPLFGLKNLRGEPEGFDVEIARIITDALGIPADKVKFVE 132

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
             +  R   ++  ++D++         R     + F    Y  GQ  ++   +   +   
Sbjct: 133 TVSANREPFIEQHRVDLVVATYTINDKR--KQVVDFAGPYYVAGQTLMVRAGETAITGKD 190

Query: 143 -LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  +C  +G+T     A+  +         +F+   +   A +A + DA T D + L
Sbjct: 191 TLAGKKVCSVSGSTP----AERIRTQAPDAELTLFDVYSKCAEALKAGQVDAVTTDNAIL 246

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             L   +  P    ++ +  S  P    I +GD E+   ++ T  A 
Sbjct: 247 LGL--MDSDPGAFKLVGEPFSTEPYGIGIAKGDDEFRTFINDTLEAA 291


>gi|309780305|ref|ZP_07675056.1| glutamate/aspartate transporter [Ralstonia sp. 5_7_47FAA]
 gi|308921008|gb|EFP66654.1| glutamate/aspartate transporter [Ralstonia sp. 5_7_47FAA]
          Length = 302

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 8/245 (3%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68
              F ++       L  I+  G +        + F+ +  +    G+ +D C      + 
Sbjct: 21  TAFFPSNAVAATPTLDRIRDSGTVHVAYREDSIPFSYLDGS-KPVGYAIDICSRLIDSIK 79

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +++     K+QY+P+ A  R   + S + D+   +T     RE    +AF    Y     
Sbjct: 80  TSLKRPDLKVQYVPVTAATRMDVVASGKADLECGST--NNSRERREKVAFTIPHYITKGR 137

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++     I     L+G ++ V A  +T   LA       M    +    +    A    
Sbjct: 138 MLVKTGSPIQQWEDLNGKTV-VAARGSTNADLARKLNETGMTVQVVDANDLRSAFAMLAD 196

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            R +A+ GD   L  ++ T   P+++ +       S  A  + + D E+  ++  +   +
Sbjct: 197 GRANAFAGDDILLSGMRATAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRL 256

Query: 249 VTAEE 253
           +   E
Sbjct: 257 IVDGE 261


>gi|191638265|ref|YP_001987431.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus
           casei BL23]
 gi|239631650|ref|ZP_04674681.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301066314|ref|YP_003788337.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|190712567|emb|CAQ66573.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus
           casei BL23]
 gi|239526115|gb|EEQ65116.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300438721|gb|ADK18487.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
 gi|327382298|gb|AEA53774.1| Extracellular solute-binding protein family 3 [Lactobacillus casei
           LC2W]
 gi|327385493|gb|AEA56967.1| Extracellular solute-binding protein family 3 [Lactobacillus casei
           BD-II]
          Length = 270

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 93/256 (36%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCL-----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   ++++ L      ++   +  T  +    I++   +  G++   V     + NG 
Sbjct: 1   MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+      +   + +  ++   +   L+++ ID++      T  R+    
Sbjct: 61  LAGYDIDLAKAVFKRYGIN---VDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKE--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +   K  I ++  ++G ++ VQ G++    L    K          
Sbjct: 116 VAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   +      A R      D             PS + I  D       A  + +
Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRK 235

Query: 233 GDTEWYNIVSWTHYAM 248
            D    + ++    A+
Sbjct: 236 SDNVLRSKINAGLKAL 251


>gi|306825320|ref|ZP_07458662.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432756|gb|EFM35730.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 279

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 14/253 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M  K   +++      F T+ +  AS          +K+G +  G +   V     + NG
Sbjct: 1   MKRKKIALALALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D  +A+S  +     +I++ P++   +   LQ+  ID +      T  R+   
Sbjct: 61  QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            +AF      + Q  +  K + I S+  ++   +  QAG++  L      +  K      
Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMTDKILGAQAGSSGYLNFEGQPELLKNRVKDQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R DA   D         +    S++ +          A  + 
Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILSDYNVFSAGFESEAFAVGVR 235

Query: 232 QGDTEWYNIVSWT 244
             D      ++  
Sbjct: 236 PADKTLLAALNQA 248


>gi|34498540|ref|NP_902755.1| arginine/ornithine ABC transporter substrate-binding protein
           [Chromobacterium violaceum ATCC 12472]
 gi|34104396|gb|AAQ60754.1| arginine/ornithine transport system substrate-binding protein (ABC
           superfamily) [Chromobacterium violaceum ATCC 12472]
          Length = 254

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S     +    S S  A           L+ G++     F++  A+G  +GFD
Sbjct: 1   MKKALIAS---AGLALLASLSAQAET---------LRVGVDLNYPPFSKQGADGKPQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL +A+       Q +P +      AL + + D++  +   T  R+    + F  
Sbjct: 49  IDIANALCAAM---KVTCQIVPQDWDGLIPALNANKFDVIISSMQITPERQK--AVDFSH 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +  K       + L G  I V   +T E    DY+  +      + + +  
Sbjct: 104 KYYNIASRMV-AKDGTKVDAASLKGKKIGVLRASTQEKFAKDYWGKNG--ATVVPYAKSP 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           E     ++ R DA   D +      L   +   +  +    S           A+ +G+ 
Sbjct: 161 ESFLDLKSGRVDAVFVDSAVGEQEFLKTTQAKGYSFVGPNYSDVKYFGPGCGIAVKKGNK 220

Query: 236 EWYNIVSW 243
                ++ 
Sbjct: 221 ALVERLNK 228


>gi|194466983|ref|ZP_03072970.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
 gi|194454019|gb|EDX42916.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
          Length = 276

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 99/255 (38%), Gaps = 19/255 (7%)

Query: 1   MYKDF----FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52
           M K +      ++L + +L  ++         +L +  +   +  G+      F      
Sbjct: 1   MKKYWRLISLSALLFITLLTLSACGTSIAKKDVLTEDMRSQRITWGVKADTRLFGLENIR 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G  +GF++D   A++  I     K  ++P+ +  R   L++  ID +      T  RE 
Sbjct: 61  TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170
              + F    +  GQ  ++ K   I +++ L+  GA I   +G+ +   +A +       
Sbjct: 121 --QVDFTHSYFDAGQSLLVRKGSPIKNINDLNRRGAVILGVSGSNSVKNVARFAPKA--- 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +      +   A ++ + DA T D   LY +    + P  + ++    +K P   A+
Sbjct: 176 -RVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAA--ENPG-YEVVGGNFTKEPYGIAV 231

Query: 231 IQGDTEWYNIVSWTH 245
            +    + N ++W  
Sbjct: 232 NKNQARFRNKLNWAL 246


>gi|146318671|ref|YP_001198383.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|146320878|ref|YP_001200589.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           98HAH33]
 gi|253751787|ref|YP_003024928.1| putative extracellular amino acid-binding protein [Streptococcus
           suis SC84]
 gi|253753610|ref|YP_003026751.1| extracellular amino acid-binding protein [Streptococcus suis P1/7]
 gi|253755509|ref|YP_003028649.1| extracellular amino acid-binding protein [Streptococcus suis BM407]
 gi|145689477|gb|ABP89983.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
 gi|145691684|gb|ABP92189.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           98HAH33]
 gi|251816076|emb|CAZ51696.1| putative extracellular amino acid-binding protein [Streptococcus
           suis SC84]
 gi|251817973|emb|CAZ55754.1| putative extracellular amino acid-binding protein [Streptococcus
           suis BM407]
 gi|251819856|emb|CAR45858.1| putative extracellular amino acid-binding protein [Streptococcus
           suis P1/7]
 gi|292558355|gb|ADE31356.1| extracellular solute-binding protein, family 3 [Streptococcus suis
           GZ1]
 gi|319758136|gb|ADV70078.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           JS14]
          Length = 266

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 90/262 (34%), Gaps = 16/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   ++   L  L   + S+  + S L  IK++G L    +     F     V    +
Sbjct: 1   MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+   + ++  +      ++   ++      ++Q+ + DI      ++  R     
Sbjct: 61  VVGADIMLAQKIADELGVK---LEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKV-- 115

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      ++ K     ++S+  +SG ++ VQ G+T E    +     N     
Sbjct: 116 FDFSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQESYAQENISQAN----L 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     ++ + DA   D          N   +   +    I ++    A+ +G
Sbjct: 172 ISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKG 231

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
            TE    +      +  + E  
Sbjct: 232 STELKTAIDKVIAEVKASGEFD 253


>gi|116495484|ref|YP_807218.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|116105634|gb|ABJ70776.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 274

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 9/226 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +  IL   K    +  G+      F  +    G  +GFDVD  +A++  I     K Q 
Sbjct: 29  ADRDILTTAKTTNTIVWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +  R   ++   +D +      T  R+    L F  + +  GQ  ++ K   I SV
Sbjct: 89  VQVTSDTRVPMIKGGSVDAVIATMTITPERQKI--LDFSDVYFNAGQSILVKKGSPIKSV 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L   +  +    +      D  K        +      +   A ++ + DA T D   
Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNGI 203

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           LY +   +     +++     +K P   AI +G   +   V+    
Sbjct: 204 LYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVNKAIK 246


>gi|50122416|ref|YP_051583.1| putative amino acid ABC transporter substrate binding protein
           [Pectobacterium atrosepticum SCRI1043]
 gi|49612942|emb|CAG76393.1| putative amino acid ABC transporter, substrate binding protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 268

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 98/265 (36%), Gaps = 17/265 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++   +L   + S  A  L DI+KRG L+  +      F  V  +   +G+D+
Sbjct: 8   IKKGLLAVMGAAMLLVQAGSVMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R L+  +      +Q +P+ +  R   LQ+ ++D++  +      RE    + F   
Sbjct: 68  DIARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   ++S   L G SI V  G   ++ L +             +E    
Sbjct: 123 YAPFFLGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKA---AQIKRYEDNNT 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + + +        + A+      P++  +   ++  SP    + + +      V
Sbjct: 180 TLSAYLSGQVEFVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGMKKDEPALKAKV 237

Query: 242 SWTHYAMVTAEELGITQKNINQVSK 266
                      E  +    +N +S+
Sbjct: 238 DALI-------EQALKDDTLNSLSE 255


>gi|300725186|ref|YP_003714514.1| putative amino acid ABC transporter ATP-binding protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297631731|emb|CBJ92450.1| putative amino acid-binding protein (ABC superfamily, peri_bind)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 282

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 93/246 (37%), Gaps = 13/246 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
           K        L  L   S    A  L DIKK G ++  +      F  +        G+DV
Sbjct: 6   KSRIAITALLTSLALVSGVAKADKLDDIKKAGTVRIAVFDSNPPFGFIDPRTKKLAGYDV 65

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++S +      ++  P N   R   L SK+ID+++ N   T  R     + F   
Sbjct: 66  EIANAIASDLGVK---LELRPTNPANRIPLLSSKKIDLIAANFTVTDERAK--QVDFSIP 120

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  GQ FI  K   +++   ++   I    GT  E+TL + +         I ++    
Sbjct: 121 YFATGQKFIARKG-VLTNPDDIAKLRIGADKGTVQEITLRERYPTAK----VISYDDTPL 175

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYN 239
             AA R     A T D + L  L          +  I P  I++   A A+ +G+    +
Sbjct: 176 AFAALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAVTKGEGRLID 235

Query: 240 IVSWTH 245
            V+ T 
Sbjct: 236 AVNQTL 241


>gi|332076443|gb|EGI86906.1| major cell-binding factor [Streptococcus pneumoniae GA41301]
          Length = 254

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTNKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|269219728|ref|ZP_06163582.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210970|gb|EEZ77310.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 400

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 10/234 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
                +     A     IK  G ++ G+      F    ++G   G+DV++ + ++  + 
Sbjct: 98  GAGGSSVKPVGARTPEQIKAAGTVRIGVFGDKAPFGYTDSDGTNVGYDVEYAKRIAKDLG 157

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +  +   A  R   L S ++D++  N   T  R     + F         G +  
Sbjct: 158 VKLELVPVV---ADSRVEYLTSGKVDVILANFTVTPERAE--KVDFAKPYMKVSLGAVSR 212

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+S SQLSG  I V  GTT +  +     A +  + P  +++  ++  A    R D
Sbjct: 213 KDAPITSESQLSGKKILVVKGTTADSYIQ----AKHPDWKPAKYDQYSDVYNALADGRGD 268

Query: 193 AYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  D + AL   +   ++      +  +     +A A+ +G+    N ++   
Sbjct: 269 VWVTDNTEALAFSRQGENKDKFVTGITQLGPVDTIAGAVQKGNAPLRNWLNKEL 322


>gi|256828611|ref|YP_003157339.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577787|gb|ACU88923.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
          Length = 247

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 22/264 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +   +L   +    A       +   L  GI+     FA V  +G   GFD
Sbjct: 1   MLKR--AAFVIACLLCMAAGPALA-------EEKVLLNGIDANYPPFAYVDQSGKPSGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +++ +     K++++P++       L +K+ID +      T  R  S  + F  
Sbjct: 52  VDAVDWIAAKMG---FKVKHVPVDWDGIIPNLLAKKIDFICSGMTITAER--SEKVNFTA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     F+  K   + +        ++ +QAGT+    +AD  +    K+   +++  
Sbjct: 107 PYWEVKNVFVTKKDSALKAEEIYGKEVTVGMQAGTSEAKWMADEKEKQGWKFTIKLYDSA 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R DA   +     A      RP +  I+       P   A+ + D E  +
Sbjct: 167 PMAIEDLVNGRLDAAAMNYP--PARDAEKKRPVQ--IVGIFGEVEPFGAAVRKEDKELLD 222

Query: 240 IVS---WTHYAMVTAEELGITQKN 260
            ++       A    EEL     N
Sbjct: 223 TLNKGFELLKADPYWEELIAKHLN 246


>gi|298492610|ref|YP_003722787.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
           0708]
 gi|298234528|gb|ADI65664.1| extracellular solute-binding protein family 3 ['Nostoc azollae'
           0708]
          Length = 292

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 13/242 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            + ILCL  L  T    + + L +I+KRG+L   +   L         G+ +G ++D  +
Sbjct: 32  LILILCLFSLG-TDLVASGATLPEIQKRGYLTVAVKDNLRPLGFRDDKGNLQGLEIDLAK 90

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L++ +   P  +++ P+   +R   +   +ID+   N   T  R     ++F    Y+D
Sbjct: 91  RLANDLLGKPDAVKFQPVANSDRLPVIVENKIDLAIANVTATESRSRI--VSFSVPYYYD 148

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   +  K   I+ +  L    I V   ++T   +  +          I      +    
Sbjct: 149 GAAIVT-KDTSINQLEDLYRRKIAVLNNSSTIFYVKYFIPK----SELIGVSSYAQAQEK 203

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSW 243
             ++  DA+  D S L        +   + ILP  +S  PL+  + +     E+   V+ 
Sbjct: 204 IESNAVDAFAADNSLLSGWVQEYPK---YHILPSQLSTEPLSVVMAKGLQYDEFRRSVNE 260

Query: 244 TH 245
             
Sbjct: 261 AI 262


>gi|318604514|emb|CBY26012.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 263

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  +++   + +  A  L  I++RG L+  +      F  V  +   +G+D
Sbjct: 3   MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    +AF  
Sbjct: 62  IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K+  +    QL+G ++ V  G   ++ L++             +E   
Sbjct: 117 AYAPFFLGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNN 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + + D        L    L    P++  +   ++  SP    + QG+      
Sbjct: 174 TTLSAYLSGQVDYLATGN--LVVSALARQNPAQAPVAKFMLKDSPCYIGLRQGEAALKAK 231

Query: 241 VSWTH 245
           V    
Sbjct: 232 VDALI 236


>gi|123444361|ref|YP_001008326.1| putative periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122091322|emb|CAL14208.1| putative periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 284

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 100/309 (32%), Gaps = 65/309 (21%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78
            + +A  L DIK+ G ++  +      F  +        G+DVD   A++  +      +
Sbjct: 25  GAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK---V 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +    N   R   L SK++D+++ N   T  R     + F    +  GQ FI HK   + 
Sbjct: 82  ELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VLK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +   +    I    GT  E+TL D +         I ++       A R     A T D 
Sbjct: 139 TPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNGNVQAITQDD 194

Query: 199 SALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           + L  L          +  I P  I+K      I +G+      V+ T            
Sbjct: 195 AKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNET------------ 242

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
                               + ++K     +                     ++DR  G 
Sbjct: 243 -------------------LVKLEKDGEAAK---------------------IYDRWFGP 262

Query: 317 QSELKIPRG 325
           +++   PRG
Sbjct: 263 ETKAAQPRG 271


>gi|227544431|ref|ZP_03974480.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri CF48-3A]
 gi|300908278|ref|ZP_07125743.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
 gi|68160716|gb|AAY86804.1| lr0525 [Lactobacillus reuteri]
 gi|227185594|gb|EEI65665.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri CF48-3A]
 gi|300894525|gb|EFK87882.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
          Length = 276

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 19/255 (7%)

Query: 1   MYKDF----FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52
           M K +      ++L + +L  ++         +L +  +   +  G+      F      
Sbjct: 1   MKKYWRLISLSALLFVALLTLSACGTSIAKKDVLTEDMRSQRIIWGVKADTRLFGLENIR 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G  +GF++D   A++  I     K  ++P+ +  R   L++  ID +      T  RE 
Sbjct: 61  TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170
              + F    +  GQ  ++ K   I ++S L+  GA I   +G+ +   +A +       
Sbjct: 121 --QVDFTHSYFDAGQSLLVKKGSPIKNISDLNRRGAIILGVSGSNSVKNVAKFAPKA--- 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +      +   A ++ + DA T D   LY +    + P  + ++    +K P   A+
Sbjct: 176 -RALQLSDYAQAMTALKSKQGDALTTDNGILYGMAA--ENPG-YEVVGGNFTKEPYGIAV 231

Query: 231 IQGDTEWYNIVSWTH 245
            +  T + N ++W  
Sbjct: 232 NKNQTRFRNKLNWAL 246


>gi|322373403|ref|ZP_08047939.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C150]
 gi|321278445|gb|EFX55514.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C150]
          Length = 270

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 84/254 (33%), Gaps = 17/254 (6%)

Query: 1   MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   + +  +  L    + S++ + L  +K +G L   +N     F          
Sbjct: 1   MKTWKKLLLGLTGVFALTALAACSSSNNTLDKVKDKGTLTVALNPHFAPFEFKTLQDGKD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G DV+  +A++  +      +++  ++      ++QS + DI       T  R+ + 
Sbjct: 61  TVVGADVEIAKAIADELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKT- 116

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y      ++ K         S  +  S+ VQ G+  E       K++    +
Sbjct: 117 -FDFSDTYYESETVLVVKKDDTGTYKQTSDFAKKSVAVQKGSIQEKI----AKSNLSDAN 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +   +  E     ++ + +    + +        N   +   I     S    A A+ +
Sbjct: 172 VVALSQPGEAINELKSGQVNGVVLEKAIAQGYVEQNSDLAVSDIKLKSDSNDAYAVAMPK 231

Query: 233 GDTEWYNIVSWTHY 246
           G  +    V+    
Sbjct: 232 GSDKLKAKVNKVIT 245


>gi|23464650|ref|NP_695253.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium longum NCC2705]
 gi|317481691|ref|ZP_07940724.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|23325209|gb|AAN23889.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium longum NCC2705]
 gi|316916870|gb|EFV38259.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 266

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++ L  +    +  +  A       + G ++ GI     G      +G + GFDVD  +
Sbjct: 1   MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    +  
Sbjct: 54  YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111

Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E   
Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A  +   DA T D   L  L   +       ++    ++      I +GDT+    ++  
Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226

Query: 245 HYAMVT 250
              M+ 
Sbjct: 227 IVDMIQ 232


>gi|209695418|ref|YP_002263347.1| arginine/ornithine periplasmic binding protein-dependent
           transporter [Aliivibrio salmonicida LFI1238]
 gi|208009370|emb|CAQ79643.1| arginine/ornithine periplasmic binding protein-dependent
           transporter [Aliivibrio salmonicida LFI1238]
          Length = 258

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 25/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+    +   + +         K+   ++ GI      F+  + +G+ KGFD
Sbjct: 1   MKKWLLAAIVASTAVTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    ++ + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTE 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K    + +   L G ++ VQ  TT +  L D F           +   
Sbjct: 107 KYALIPNKFVAKKGTELVMTKEGLKGVTVGVQRATTHDKYLTDNF---GSGVELKRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
           +E     +A R D   GD SAL    L      E+  +       P         A  + 
Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGKEYEFVG-PSLTDPKWFGDGFGIATRKQ 222

Query: 234 DTEWYNIVSWTH 245
           D +    ++   
Sbjct: 223 DKDLTKQLNAAI 234


>gi|46190372|ref|ZP_00206441.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bifidobacterium longum
           DJO10A]
 gi|322691618|ref|YP_004221188.1| glutamate ABC transporter substrate-binding protein
           [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320456474|dbj|BAJ67096.1| glutamate ABC transporter substrate binding component
           [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 266

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++ L  +    +  +  A       + G ++ GI     G      +G + GFDVD  +
Sbjct: 1   MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     +I +    +K+R   +Q+  +D++      T  R+    ++F    +  
Sbjct: 54  YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111

Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           GQ  ++ K    I+    L+G  +C   G+T+  T+ + F +   +   +      E   
Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A  +   DA T D   L  L   +       ++    ++      I +GDT+    ++  
Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226

Query: 245 HYAMVT 250
              M+ 
Sbjct: 227 IVDMIQ 232


>gi|116494753|ref|YP_806487.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|116104903|gb|ABJ70045.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 270

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 93/256 (36%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCL-----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   ++++ L      ++   +  T  +    I++   +  G++   V     + NG 
Sbjct: 1   MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+      +   + +  ++   +   L+++ ID++      T  R+    
Sbjct: 61  LAGYDIDLAKAVFKRYGIN---VDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKE--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +   K  I ++  ++G ++ VQ G++    L    K          
Sbjct: 116 VAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   +      A R      D             PS + I  D       A  + +
Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRK 235

Query: 233 GDTEWYNIVSWTHYAM 248
            D    + ++    A+
Sbjct: 236 SDNVLRSKINAGLKAL 251


>gi|299068311|emb|CBJ39535.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia
           solanacearum CMR15]
          Length = 288

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 94/250 (37%), Gaps = 7/250 (2%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +   + +       +   L  I+  G ++       V F+ +   G   G+ +D C  +
Sbjct: 1   MLAVPLAVSAVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYMDG-GKPIGYSIDICSRV 59

Query: 68  SSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             AI      P  K+QYLP+ A  R   + S + D+   +T      E    +AF    Y
Sbjct: 60  VDAIRTSLKRPDLKVQYLPVTAVNRMDTIASGKADLECGST--NNAPERREKVAFTIPHY 117

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                 ++    G+     L G ++    G++    +     A  +    +    ++   
Sbjct: 118 ITKGRMLVKASSGLQQWEDLHGKTVVAARGSSASDVMHKLNDATGLGMRAVDTNDLKTAF 177

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +     + DA+ GD   L  ++ T+D P+++V+       S  A  + + D ++  +V  
Sbjct: 178 SMLSTGKADAFAGDDVLLAGMRATSDNPTDYVVAGKTQLVSSYAMMMSKQDADFKKLVDQ 237

Query: 244 THYAMVTAEE 253
           +   ++   E
Sbjct: 238 SMTRLIVDGE 247


>gi|261407770|ref|YP_003244011.1| family 3 extracellular solute-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261284233|gb|ACX66204.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           Y412MC10]
          Length = 255

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 89/250 (35%), Gaps = 18/250 (7%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K        + L+ +   S S +            L  GI+           + +  G
Sbjct: 1   MKKIASVLAGFMLLLTVVGCSSSASGG--------NELVVGIDDKFAPMGFRDESNEIVG 52

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D+ RA +  +  +   +++ P++ K +   L S +ID++      T  R+    + F
Sbjct: 53  FDIDYARAAAEKMGKE---VKFQPIDWKSKESELSSGRIDLIWNGYTITDERKE--KVLF 107

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 + Q   +     I+S+S L+G  + +Q+ ++    L+   + H        F  
Sbjct: 108 TKPYLENSQVVAVLADSDIASISDLAGKQVGLQSLSSAADALSAN-EIHTQVKKINEFPD 166

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                +  +  R +A   D   +       +    + IL + ++       + +G+ E  
Sbjct: 167 NMLALSDLKNGRVEAVIIDEVVMKYFMSKEE--GTYKILEESLAPEQYGIGVKKGNEELL 224

Query: 239 NIVSWTHYAM 248
             +      M
Sbjct: 225 ESLQKALDEM 234


>gi|296130894|ref|YP_003638144.1| extracellular solute-binding protein family 3 [Cellulomonas
           flavigena DSM 20109]
 gi|296022709|gb|ADG75945.1| extracellular solute-binding protein family 3 [Cellulomonas
           flavigena DSM 20109]
          Length = 318

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 88/226 (38%), Gaps = 12/226 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            S + +I+ RG L  G++   +         G  +GFD+D  R ++ AI  DP  I++  
Sbjct: 72  GSTMDEIRARGNLVVGVSADTLRMGARNPFTGQIEGFDIDVARQVAQAILGDPDAIRFRV 131

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + A +R   L++ ++D+++R       R     +AF    +  GQ  ++  +    S+  
Sbjct: 132 ITAGDRIPVLENHEVDLVTRAFTMNCER--WDQIAFSAEYFTAGQKVLVSTESQAQSIED 189

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  +C   GTTT   L +           +         A ++  R DA TGD + L 
Sbjct: 190 LDGQRVCAPEGTTTLERLDE------YDVEAVGARTHSACLALFQQGRVDAITGDDTVLA 243

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                +       ++ D  S  P    I     +    V+     M
Sbjct: 244 GFVAQDP---YAKVVGDAFSAEPYGVGIAADRVDLVRFVNAVLDGM 286


>gi|157368266|ref|YP_001476255.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157320030|gb|ABV39127.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 279

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 106/328 (32%), Gaps = 65/328 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M        L   +    + + +A  L DIKK G ++  +      F  +   +    G+
Sbjct: 1   MKHRVLALTLLASLTSLATGAAHADKLDDIKKAGVVRIAVFDSNPPFGYIDPQSKKLVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+  A+      ++    N   R   L SK++D+++ N   T  R     + F 
Sbjct: 61  DVDVADAIGKALGVK---VELRATNPANRIPLLVSKKVDLIAANFTITDERAK--EVNFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI HK   + +   +    I    GT  E+TL +++         I ++  
Sbjct: 116 VPYFATGQKFIAHKG-VLKTPEDIKKLRIGADKGTVQEITLREHYPTAK----VISYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
                A R     A T D + L  L          +  I P  I+K      I +G+   
Sbjct: 171 PLAFVALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRL 230

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
              V+ T                                + ++K     +          
Sbjct: 231 TASVNDT-------------------------------LIKLEKDGEAAK---------- 249

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325
                      ++DR  G +++   PRG
Sbjct: 250 -----------IYDRWFGPETKTAQPRG 266


>gi|227877827|ref|ZP_03995851.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus crispatus JV-V01]
 gi|256850704|ref|ZP_05556128.1| glutamine ABC transporter [Lactobacillus crispatus MV-1A-US]
 gi|262047073|ref|ZP_06020032.1| glutamine ABC transporter [Lactobacillus crispatus MV-3A-US]
 gi|293381623|ref|ZP_06627607.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
 gi|227862588|gb|EEJ70083.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus crispatus JV-V01]
 gi|256712475|gb|EEU27472.1| glutamine ABC transporter [Lactobacillus crispatus MV-1A-US]
 gi|260572650|gb|EEX29211.1| glutamine ABC transporter [Lactobacillus crispatus MV-3A-US]
 gi|290921807|gb|EFD98825.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
          Length = 272

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 88/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K F +  SI+ L  L  +    N   ++   +K    +  G+      F  +    G 
Sbjct: 1   MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFGSINIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D   AL+  +     K  ++   A  +   L++  +D +      T  R+    
Sbjct: 61  LNGFEIDLANALTHEMLGKNVKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++     I +   L+   + V  GTT    +             + 
Sbjct: 119 VEFSHPYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAPKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +  AA +A + DA+  D   L          S + ++    +  P   A+ +G  
Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAG---ILRDSSGYKLVGGTFTNQPYGIAVNKGQN 231

Query: 236 EWYNIVSWTH 245
           +    ++   
Sbjct: 232 DMLKHINTAL 241


>gi|222109803|ref|YP_002552067.1| family 3 extracellular solute-binding protein [Acidovorax ebreus
           TPSY]
 gi|221729247|gb|ACM32067.1| extracellular solute-binding protein family 3 [Acidovorax ebreus
           TPSY]
          Length = 296

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 7/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  + ++   + L     +    +L  ++  G L        V F+ V   G   G+ +D
Sbjct: 4   KQGWKALGAAVALCCAVGAQAQGVLERVRGGGPLVLAHRESSVPFSYVHE-GKPMGYALD 62

Query: 63  FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  ++             +Q + +    R   +++ + D+   +T     R   +   F
Sbjct: 63  LCLHIAEVVRKKTGMKNMPVQLVQVTPANRIEMVKTGKADMECGSTTNNAERRKDVA--F 120

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +  G   ++     ++ +  L G  +    GTT         +   M+   +    
Sbjct: 121 TIPHFITGARLLVPAASTVTRMEDLEGKKLVSTKGTTPYKAAEQANRERLMRIQLVEAPD 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E         + DA+  D   LY L      P    ++   ++  PLA  + + D E+ 
Sbjct: 181 HEAAVVMVEKGQADAFVMDDVLLYGLAANRPDPKALKVVGRFVTTEPLAIMLPKNDPEFK 240

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 241 KLVDEEMRRLIVSNEIN 257


>gi|318608046|emb|CBY29544.1| putative periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|330861768|emb|CBX71941.1| hypothetical protein YEW_BV07660 [Yersinia enterocolitica W22703]
          Length = 284

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/309 (19%), Positives = 100/309 (32%), Gaps = 65/309 (21%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
            + +A  L DIKK G ++  +      F  +        G+DVD   A++  +      +
Sbjct: 25  GAAHADKLDDIKKEGVVRIAVFDSNPPFGYIDPHTKKLVGYDVDVANAIAKDLGVK---V 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +    N   R   L SK++D+++ N   T  R     + F    +  GQ FI HK   + 
Sbjct: 82  ELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VLK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +   +    I    GT  E+TL D +         I ++       A R     A T D 
Sbjct: 139 TPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNGNVQAITQDD 194

Query: 199 SALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           + L  L          +  I P  I+K      I +G+      V+ T            
Sbjct: 195 AKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNET------------ 242

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
                               + ++K     +                     ++DR  G 
Sbjct: 243 -------------------LVKLEKDGEAAK---------------------IYDRWFGP 262

Query: 317 QSELKIPRG 325
           +++   PRG
Sbjct: 263 ETKAAQPRG 271


>gi|291533533|emb|CBL06646.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Megamonas hypermegale ART12/1]
          Length = 251

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 14/247 (5%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSS 69
            +   F     ++S          L+ G N     F     NG  +++GFD+D  RA++ 
Sbjct: 3   AVSALFAGCGQDSSDKAASSGEKVLRVGTNADFAPFEFQDENGSTEYQGFDMDLIRAVAK 62

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +           +N      A++S  IDI++        R+    + F    Y  G   
Sbjct: 63  EMGYTAE---IQNVNFDGLIPAMESGNIDIIASGMTINEERK--NQVEFSAPYYISGLTI 117

Query: 130 IMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           ++ K    I+  + L G  I VQ GTT+         A              +     +A
Sbjct: 118 VVPKDNTDINGFADLKGKKIAVQIGTTSMEEAQKIEGA-----EVKALNSSADTFMELKA 172

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              DA   D+       +   + ++   L D ++      A+ +G+TE    V      +
Sbjct: 173 GNVDAVINDLPVN-DYYIVKTKATDVKRLDDKLTSEEYGFAMKKGNTELKQKVDAALKTL 231

Query: 249 VTAEELG 255
               E  
Sbjct: 232 KENGEYD 238


>gi|169334069|ref|ZP_02861262.1| hypothetical protein ANASTE_00462 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258786|gb|EDS72752.1| hypothetical protein ANASTE_00462 [Anaerofustis stercorihominis DSM
           17244]
          Length = 269

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 84/249 (33%), Gaps = 7/249 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   ++   T F   +              G +     +     +G++ GFD
Sbjct: 1   MKKKLALVLALFMVAGLTLFGCGSKDENAKNDDKTFVVGFDAEFPPYGYKDDDGNYIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + +      +   ++  P++   + + + S  ID +          +      +  
Sbjct: 61  LDLAQEVCDR---NGWTLKKQPVDWDSKDMEIDSGTIDCIWNGFTMNGRED---DYTWTK 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYHPIVFERV 179
               + Q  +++KK GI +   L G ++  Q  ++    L  D  K  +           
Sbjct: 115 PYIDNKQIIVVNKKTGIKNFKGLKGKTVETQKDSSALAALQGDQKKLASTFATLTEVADY 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                   +  CDA   DI        +    S+  +L ++IS    A    +G+TE  +
Sbjct: 175 NSAFMDLESGACDAIAMDIGVANYQINSRKNASDFEVLDEVISSEKYAVGFKKGNTELRD 234

Query: 240 IVSWTHYAM 248
            V  T   M
Sbjct: 235 KVQKTLDEM 243


>gi|319795551|ref|YP_004157191.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315598014|gb|ADU39080.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 319

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 88/256 (34%), Gaps = 6/256 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               +   L  L           +  I++   +  G+      F+ V A     G+ VD 
Sbjct: 25  TLIPASFALTALAALPVHAAVDTMSKIRETRTIVLGVREAAAPFSFVNAQKQPVGYSVDL 84

Query: 64  CR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C      +   +     K+QY P++  +R   L S +ID+   +T  T+ R     + F 
Sbjct: 85  CMNAVEEIRRELKLPDIKVQYKPVSGPDRIPKLLSGEIDLECGSTTNTMAR--QEKVDFS 142

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  G   +  +   + +V  L    + +  GTT+E       +          ++  
Sbjct: 143 YTFFVAGMRVLTSQNLHVDTVKDLQKQPVALTKGTTSEKLFRQLAEGELRDAKFTTYDNN 202

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +  +  A+  D S L  L   +       +    +S  P A    +GDT    
Sbjct: 203 VEAFKALKEGKVRAFAQDDSLLQGLVSNDKTIDTLSLSRLALSVEPYAVMARKGDTALLA 262

Query: 240 IVSWTHYAMVTAEELG 255
            V  +   + ++ E+ 
Sbjct: 263 AVDRSLAQLYSSGEIN 278


>gi|29828504|ref|NP_823138.1| glutamate binding periplasmic protein [Streptomyces avermitilis
           MA-4680]
 gi|29605607|dbj|BAC69673.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 305

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 40/279 (14%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNAS--------------------------ILGDI 30
           M +       ++++ +  L  T+     S                               
Sbjct: 1   MIRSTRVCLALALVLITALLATACGKEGSPPTKGPATDKLPDYQVAQGFQLNDSPTWKRA 60

Query: 31  KKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           KKRG+L  G+        E    +G + GFD++  + +S+++  DP  I++  + +  R 
Sbjct: 61  KKRGYLTVGVKEDQPYLGERDPASGAFSGFDIEIAKMMSASLGFDPGTIRFKTIASANRE 120

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASI 148
            ALQ+ QID           R+  +G  F    Y  GQ  ++ K  +GI+    L+G  +
Sbjct: 121 TALQNGQIDYYVGTYTINDKRKKLVG--FAGPYYLAGQSLLVRKDEQGINGPQDLAGKRV 178

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           C  AG+T    +   +         + ++           ++ DA T D + L       
Sbjct: 179 CSAAGSTPYQRIQQDYPK----VKLVAYDTYSVCVDNLLTYQVDAVTTDDAILIGYAAKV 234

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
             P E  ++    S+ P    + + D      +     A
Sbjct: 235 --PEELKVVGKPFSEEPYGIGVPRNDNALRFALDDALEA 271


>gi|152968872|ref|YP_001333981.1| cysteine ABC transporter periplasmic substrate binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|206578283|ref|YP_002240191.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Klebsiella pneumoniae 342]
 gi|262042357|ref|ZP_06015519.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288936935|ref|YP_003440994.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290510009|ref|ZP_06549379.1| cysteine transport system periplasmic binding component [Klebsiella
           sp. 1_1_55]
 gi|330006799|ref|ZP_08305702.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|150953721|gb|ABR75751.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206567341|gb|ACI09117.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Klebsiella pneumoniae 342]
 gi|259040265|gb|EEW41374.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288891644|gb|ADC59962.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289776725|gb|EFD84723.1| cysteine transport system periplasmic binding component [Klebsiella
           sp. 1_1_55]
 gi|328535739|gb|EGF62181.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 269

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78
               A  L DIK  G +K         F  V A      G+DVDF +AL+ A+      +
Sbjct: 19  SQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALGVK---L 75

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + +  N   R   LQS + D++  +   T  R  +  + F    +  GQ F++       
Sbjct: 76  ELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSTPYFVTGQQFLVPAGSP-D 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            + + S A I    GTT E  L   F         + ++ +     A R     A T D 
Sbjct: 133 KLDEYSKARIGAVKGTTGEQALHQRFPQA----RVLSYDDIPLALTALRNGNVQAITQDS 188

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           + L  L       ++  ILPD++SK  +   + +G+      V+     +    E
Sbjct: 189 TILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVNDELVKLEKTGE 243


>gi|111223300|ref|YP_714094.1| putative ABC transporter glutamine-binding protein GlnH [Frankia
           alni ACN14a]
 gi|111150832|emb|CAJ62536.1| putative ABC transporter glutamine-binding protein GlnH [Frankia
           alni ACN14a]
          Length = 350

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 11/234 (4%)

Query: 14  ILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71
            +  T  +  A   L  I++RG+L+  +   +  F  + A  G ++GFDVD    +  AI
Sbjct: 91  AVPPTPGAMPAGTFLATIQQRGYLRAAVLADVPPFGSINAFTGQFEGFDVDLANRIGRAI 150

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
           F     +++      ER   L    +DI+         R     + F  + +++ Q  ++
Sbjct: 151 FGTDGHVRFRATTYAERIPVLTHGDVDIVVATMTTNCERRR--QIDFSTVYWYETQRVLV 208

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                  S+  L G  +C  AGTTT  TL       +          + +     ++ + 
Sbjct: 209 PLGSPARSLDDLGGQPVCTAAGTTTVDTLRRT----SSHPVVRTVPNIADCLVLLQSGQV 264

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              T   + L  +      P  H++ P + +  P A  + +G  E    V+   
Sbjct: 265 AGITTTSAVLAGMAAQ--DPRVHLVGPGLSN-EPDAIGVARGHPELTRFVNGVL 315


>gi|292669467|ref|ZP_06602893.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Selenomonas noxia ATCC 43541]
 gi|292648920|gb|EFF66892.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Selenomonas noxia ATCC 43541]
          Length = 257

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 13/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M       +L   ++         S     ++   L+ G       F         ++GF
Sbjct: 1   MKLKKLALVLTGALVSLALVGCGGSNDQAKQESKVLRVGSAIDFAPFEFQDEGQKDYQGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  RA++  +  +        +       ALQ+K ID++         R+    + F 
Sbjct: 61  DMDLIRAIAKEMGSEAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--RVNFS 115

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++    + I S S L G  + VQ GTT+   + +                
Sbjct: 116 DPYYQSGLTMVVRSDEENIKSFSDLKGHKVAVQIGTTSAKMVKEM-----EGVTITELNT 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +A   DA   D        +   +      L D +S      A+ + + E  
Sbjct: 171 PADCFIELKARGVDAVVNDRPVN-DYYINQSQAVGVKSLDDKLSAEDYGIAMAKDNVELQ 229

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     +    E  
Sbjct: 230 KKINEALKKLHDNGEYD 246


>gi|271501781|ref|YP_003334807.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270345336|gb|ACZ78101.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 263

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 13/247 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K    +++   +L   +    A  L DI+KRG L+  +      F  V  +   +G
Sbjct: 1   MKIGKRVL-AVVGAALLMVQAGQAMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  R L+S +     K+Q +P+++  R   LQ+ ++D++  +      RE    + F
Sbjct: 60  YDIDMARYLASEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNAEREKV--IDF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    G    K   ++S   L G ++ V  G   ++ L D             +E 
Sbjct: 115 SSAYAPFFLGVFGPKDTTVTSPDALQGKTVGVTRGAVEDMVLTDIAPK---TADIKRYED 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                +AY + +          + A+      P +  +   ++  SP    + + +    
Sbjct: 172 NNTTLSAYMSGQVQYIATGNLVVAAIA--EKNPEKAPVAKFMLKDSPCYIGLKKDEPALK 229

Query: 239 NIVSWTH 245
             V+   
Sbjct: 230 AKVNELI 236


>gi|227535250|ref|ZP_03965299.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187134|gb|EEI67201.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 270

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 93/256 (36%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCL-----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   ++++ L      ++   +  T  +    I++   +  G++   V     + NG 
Sbjct: 1   MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +AL      +   + +  ++   +   L+++ ID++      T  R+    
Sbjct: 61  LAGYDIDLAKALFKRYGIN---VDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKE--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +   K  I ++  ++G ++ VQ G++    L    K          
Sbjct: 116 VAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKT 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           PI+++   +      A R      D             PS + I  D       A  + +
Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRK 235

Query: 233 GDTEWYNIVSWTHYAM 248
            D    + ++    A+
Sbjct: 236 SDNVLRSKINAGLKAL 251


>gi|53719422|ref|YP_108408.1| putative amino acid transport system, exported protein
           [Burkholderia pseudomallei K96243]
 gi|76810718|ref|YP_333446.1| extracellular solute-binding protein [Burkholderia pseudomallei
           1710b]
 gi|121599839|ref|YP_992996.1| extracellular solute-binding protein [Burkholderia mallei SAVP1]
 gi|124384138|ref|YP_001026328.1| polar amino acid ABC uptake transporter substrate binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126441076|ref|YP_001058918.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 668]
 gi|126448524|ref|YP_001080398.1| extracellular solute-binding protein [Burkholderia mallei NCTC
           10247]
 gi|126454167|ref|YP_001066160.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106a]
 gi|134282189|ref|ZP_01768894.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 305]
 gi|167719672|ref|ZP_02402908.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei DM98]
 gi|167738660|ref|ZP_02411434.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 14]
 gi|167815884|ref|ZP_02447564.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 91]
 gi|167845801|ref|ZP_02471309.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei B7210]
 gi|167894372|ref|ZP_02481774.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 7894]
 gi|167902774|ref|ZP_02489979.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei NCTC 13177]
 gi|167911019|ref|ZP_02498110.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 112]
 gi|167919034|ref|ZP_02506125.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei BCC215]
 gi|217421274|ref|ZP_03452778.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 576]
 gi|237812174|ref|YP_002896625.1| polar amino acid ABC uptake transporter substrate binding protein
           [Burkholderia pseudomallei MSHR346]
 gi|242315405|ref|ZP_04814421.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106b]
 gi|254178648|ref|ZP_04885303.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia mallei ATCC 10399]
 gi|254179866|ref|ZP_04886465.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1655]
 gi|254188730|ref|ZP_04895241.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254197737|ref|ZP_04904159.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei S13]
 gi|254258483|ref|ZP_04949537.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1710a]
 gi|254297706|ref|ZP_04965159.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 406e]
 gi|254358534|ref|ZP_04974807.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia mallei 2002721280]
 gi|52209836|emb|CAH35808.1| putative amino acid transport system, exported protein
           [Burkholderia pseudomallei K96243]
 gi|76580171|gb|ABA49646.1| extracellular solute-binding protein [Burkholderia pseudomallei
           1710b]
 gi|121228649|gb|ABM51167.1| extracellular solute-binding protein [Burkholderia mallei SAVP1]
 gi|124292158|gb|ABN01427.1| polar amino acid ABC uptake transporter substrate binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126220569|gb|ABN84075.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 668]
 gi|126227809|gb|ABN91349.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106a]
 gi|126241394|gb|ABO04487.1| extracellular solute-binding protein [Burkholderia mallei NCTC
           10247]
 gi|134246227|gb|EBA46316.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 305]
 gi|148027661|gb|EDK85682.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia mallei 2002721280]
 gi|157807287|gb|EDO84457.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 406e]
 gi|157936409|gb|EDO92079.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160699687|gb|EDP89657.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia mallei ATCC 10399]
 gi|169654478|gb|EDS87171.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei S13]
 gi|184210406|gb|EDU07449.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1655]
 gi|217395016|gb|EEC35034.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 576]
 gi|237505304|gb|ACQ97622.1| polar amino acid ABC uptake transporter substrate binding protein
           [Burkholderia pseudomallei MSHR346]
 gi|242138644|gb|EES25046.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106b]
 gi|254217172|gb|EET06556.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1710a]
          Length = 271

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 92/253 (36%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M    F + L  + L     + +A  L DI+K G L+         F  V        G 
Sbjct: 1   MKFKPFATWLLGLSLVAAHAAAHADRLDDIRKAGVLRVATFDSNPPFGFVDPRTNRIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAQALADRLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+   I    GTT E+TL + +         + ++  
Sbjct: 116 VPYFASGQQFLAKKG-VLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + +    IS   +     +G+     
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGEPRLVA 230

Query: 240 IVSWTHYAMVTAE 252
            V+ T   +  + 
Sbjct: 231 FVNETLTDLEASG 243


>gi|218296357|ref|ZP_03497100.1| extracellular solute-binding protein family 3 [Thermus aquaticus
           Y51MC23]
 gi|218243151|gb|EED09682.1| extracellular solute-binding protein family 3 [Thermus aquaticus
           Y51MC23]
          Length = 254

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 17/246 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   F+ IL L + F             IKK G ++ G       F    A     GF
Sbjct: 1   MRKVLVFLGILALGLAF-----AQVRTFDQIKKSGEIRIGTEGAFPPFNYFDAKNQLTGF 55

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A++  +   P   +++  +     + L   + D +  +   T  R     + F 
Sbjct: 56  EIDLGNAIAKKLGLKP---KWIAQSFDSLLIQLGQGRFDFVIASHGITEERAK--AVDFT 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              ++   G I+ KK G  +   L G  + VQ GTT                    +++ 
Sbjct: 111 NP-HYCTGGIIVSKKGGPKTKKDLEGKVVGVQIGTTYMEAAQKIPGVR----QVRTYQKD 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      A R DA+  D        +   +    + L +++ +  +A A+ +G+    +
Sbjct: 166 PDALQDLLAGRVDAWITDRFV-AKEAIKERKLEGTLQLGELVFQERVAMAVAKGNKSVLD 224

Query: 240 IVSWTH 245
            ++   
Sbjct: 225 ALNKAL 230


>gi|295692439|ref|YP_003601049.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           crispatus ST1]
 gi|295030545|emb|CBL50024.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           crispatus ST1]
          Length = 272

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 90/250 (36%), Gaps = 14/250 (5%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K F +  SI+ L  L  +    N   ++   +K    +  G+      F+ +    G 
Sbjct: 1   MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFSSINIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D   AL+  +    +K  ++   A  +   L++  +D +      T  R+    
Sbjct: 61  LNGFEIDLANALTHEMLGKNAKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++     I +   L+   + V  GTT    +             + 
Sbjct: 119 VEFSHPYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAAKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +  AA +A + DA+  D   L          S + ++    +  P   A+ +G  
Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAG---ILRDSSGYKLVGGTFTNQPYGIAVNKGQN 231

Query: 236 EWYNIVSWTH 245
           +    ++   
Sbjct: 232 DMLKHINTAL 241


>gi|330873992|gb|EGH08141.1| cystine transporter subunit [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 268

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 79/246 (32%), Gaps = 9/246 (3%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDKNGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S   LSG  + V  GT  E  L    KA+        +E   
Sbjct: 124 TISGIQALVLKKNADAIKSAKDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    R DA   D  A   +         E     +  S+     A+ +G+ E   
Sbjct: 180 TKIQDLSVGRIDAILVDRLAALEIAAKTKDTKRELAPAGEAFSRQESGIALRKGEPELLA 239

Query: 240 IVSWTH 245
            +    
Sbjct: 240 AIDKAI 245


>gi|170698703|ref|ZP_02889769.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170136407|gb|EDT04669.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 264

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNAKNPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +        ++          LQ+ + D+++     T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLDDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228

Query: 236 EWYNIVSWTHYAMVTAE 252
           ++   +     A + A+
Sbjct: 229 KFQKAIDDAM-AQLEAD 244


>gi|17544841|ref|NP_518243.1| substrate-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427130|emb|CAD13650.1| probable substrate-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 299

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 93/252 (36%), Gaps = 7/252 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +   + +       +   L  I++ G ++       V F+     G   G+ +D C 
Sbjct: 10  LAMLAVPLAVSAFHAMASTPTLDRIRETGIIRLAYREDSVPFSYTDG-GKPIGYSIDICS 68

Query: 66  ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            +  A    +     K+QYLP+ A  R   + S + D+   +T      E    +AF   
Sbjct: 69  RVVDAIRTSLKRPELKVQYLPVTAANRMDTIASGKADLECGST--NNAPERREKVAFTIP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y      ++    G+     L G ++    G++    +     A  +    +    ++ 
Sbjct: 127 HYITKGRMLVKVSSGLQQWDDLHGKTVVAARGSSASDVMHKLNDATGLGMRTVDTNDLKT 186

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             A     + DA+ GD   L  ++ T+D PS++V+       S  A  + + D ++  +V
Sbjct: 187 AFAMLSTGKADAFAGDDVLLAGMRATSDNPSDYVVAGKTQLVSSYAMMMSKQDADFKKLV 246

Query: 242 SWTHYAMVTAEE 253
             +   ++   E
Sbjct: 247 DQSMTRLIVDGE 258


>gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 497

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 93/268 (34%), Gaps = 19/268 (7%)

Query: 2   YKDFFVSILCLIILFFTSF--------STNASILGDIK---KRG-FLKCGINTGLVGFAE 49
            K + V ++ L+ +             +     +  ++   KRG  +  G++        
Sbjct: 8   KKSWIVMVIALVTILGLVTNHHVEAEEAAPQERMESVEEGPKRGDKVVIGLDDTFAPMGF 67

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                +  GFD+D  +A++     +   + + P++   +   L S  ID+L      T  
Sbjct: 68  RNGQNEIVGFDIDLAQAIAEIYGWE---LDFQPIDWAMKETELNSGNIDLLWNGVGITPE 124

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           RE  +   F    +      I  K   I  +S L G +I  Q+G+TT   +  +      
Sbjct: 125 REEQM--LFSQPYFESPNIVITKKGSPIKELSDLVGKTISTQSGSTTAEDIKGWPNQLYQ 182

Query: 170 K--YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           K    P+++    E+ A   + R DA   D +  + +            +        +A
Sbjct: 183 KLAQKPVLYSSYNEVFADLDSGRVDAVVTDYTYGHYIMEVRGEEKYDSFVDPSKEPEQMA 242

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A+ +  +    ++      +  + +  
Sbjct: 243 VAMRKSASGLKTMIDQGLDQVKASGKYD 270


>gi|313890041|ref|ZP_07823676.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121402|gb|EFR44506.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 274

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 81/250 (32%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++ +   +   +           KK   +  G +   V       +G  
Sbjct: 1   MKKLVITLTTVVVSISLVACGKSQAPKGDSWKTYKKEKTITLGFDNTFVPMGYKDESGKN 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDV+  +A+ +       ++++  +N   +   L++ +ID++      T  R+    +
Sbjct: 61  TGFDVELAKAVFAEYG---IRVKFQAINWDLKETELKNGKIDMIWNGYSVTKERQA--KV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173
           AF      + Q  +      I S S + G ++  Q+ ++       Y K           
Sbjct: 116 AFSNPYMKNEQVLVSKNAAHIKSFSDMKGKTLGAQSASSGYDAFTRYPKVLKDSVKGQDA 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     + +R DA   D               ++ +     +    A  + + 
Sbjct: 176 TQYETFTQGFIDLKNNRIDALLIDKVYANYYLKQEGDLEKYHMTKSDYAGEAFAVGVRKE 235

Query: 234 DTEWYNIVSW 243
           D     +++ 
Sbjct: 236 DKTLVKMINK 245


>gi|296157669|ref|ZP_06840503.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295891915|gb|EFG71699.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 264

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 17/251 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       + +  LI   FT+ + +A  +L  +K+RG L+ G+      F     +G+  
Sbjct: 1   MKFGLLKKILVAGLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L 
Sbjct: 61  GYDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ + +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLMKNSQLP--LRTGANVGAGNPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFAKAIDDAMT 239


>gi|257461102|ref|ZP_05626200.1| polar amino acid ABC uptake transporter substrate binding protein
           [Campylobacter gracilis RM3268]
 gi|257441476|gb|EEV16621.1| polar amino acid ABC uptake transporter substrate binding protein
           [Campylobacter gracilis RM3268]
          Length = 267

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    L        A+ L DIK+ G ++ G+      F+    NG  KGF+
Sbjct: 1   MKKILLSILLGAGALC-------ANSLADIKQAGEIRIGLQDSQPPFSF-DDNGTLKGFE 52

Query: 61  VDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           VD    L   +F +   KI ++ + +K+R  +L+  ++D++      T   +    + F 
Sbjct: 53  VDLANELVKNLFGNKKIKIDFISVASKDRVPSLEQNKVDLIISKLTVTK--DRVQKVDFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y    G +  K   IS + Q++   I    GTT E          N  Y        
Sbjct: 111 YPYYSVQIGVLSRKDDNISRIDQIAHKKILSVKGTTAEEHFK------NAGYEIATCADA 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E  A  +A     +  D + +       +  +    + ++     +A A+ +G+TE  +
Sbjct: 165 NECVARLKAGEGIGFADDNTVVLGYA--RNDAALDAKIINLGKVDYIAVALSKGNTELLD 222

Query: 240 IVSWTHYAMVTA 251
            V+ +   M  A
Sbjct: 223 AVNSSLVKMYKA 234


>gi|291456584|ref|ZP_06595974.1| CjaA protein [Bifidobacterium breve DSM 20213]
 gi|291381861|gb|EFE89379.1| CjaA protein [Bifidobacterium breve DSM 20213]
          Length = 282

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 93/254 (36%), Gaps = 23/254 (9%)

Query: 2   YKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFAE 49
            K     +  + ++   +             S     +  IKK G ++      L  +  
Sbjct: 5   KKALAGVLAGVTLISVAACGNGPDPAAGGSSSQQGQTVEQIKKTGKIRIATFGDLPPYGY 64

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           VK +G   G+DV     +   +      + ++ +NA  R  +L+S ++D++  N   T  
Sbjct: 65  VKNDGTRAGYDVALGNQIGKDLGVK---VDWVQVNADGRVDSLKSDKVDLVLANFTVTDE 121

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F         G +      I+S  QL G  + V  GTT E     +F     
Sbjct: 122 RK--QVVDFADPYMKVSIGVVSPDSAKITSADQLKGKQLAVTKGTTAEA----FFTEKYP 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 F+   +   A++  R  A   D + LYA     D P   V +  I  +S +APA
Sbjct: 176 DVQLRKFDSKTQQFQAFKDGRVAALADDNTYLYAWA--KDNPGYTVGIKTIGDESTIAPA 233

Query: 230 IIQGDTEWYNIVSW 243
           + +G+       + 
Sbjct: 234 VKKGNKSLLEWTNK 247


>gi|163759017|ref|ZP_02166103.1| probable amino acid ABC transporter, substrate-binding protein
           [Hoeflea phototrophica DFL-43]
 gi|162283421|gb|EDQ33706.1| probable amino acid ABC transporter, substrate-binding protein
           [Hoeflea phototrophica DFL-43]
          Length = 262

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 100/255 (39%), Gaps = 10/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + L L +          + L DI + G +K GI      F  + A G+++G+D
Sbjct: 1   MLNKLRTATLALCVATVGFAGAAHAELSDILEAGTIKIGIPESFPPFGSLGAEGEYEGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  D   I+ +P+ +K+R   L++ ++D++  +      R     + F  
Sbjct: 61  VDVAKLIAEDLGID---IELVPVTSKQRIPFLETDRVDLIISSMGANPERAK--SIWFSS 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G        ISS++ L+G  + V  G+  ++ L +           I F    
Sbjct: 116 AYAPFFSGAFASTDMAISSMADLAGKKVGVTGGSLEDIELTENSPE---GTEIIRFGDNA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + + D      +   A +++ D P   +    II +SP    + +G+ +    
Sbjct: 173 ATLSAYVSGQVDVLVTGNT--VAAQVSADNPDLSMETKFIIKESPAFIGVKKGNVDLLQW 230

Query: 241 VSWTHYAMVTAEELG 255
           V+          +L 
Sbjct: 231 VNVFILHKKLGGQLN 245


>gi|312958352|ref|ZP_07772873.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311287416|gb|EFQ65976.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 264

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 83/245 (33%), Gaps = 11/245 (4%)

Query: 2   YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            +   V  L L +   +   +     LG+IKK G +K G+      F+ V  +G   GF+
Sbjct: 7   RRTLLVGTLGLALGAGWLGQAVAGEQLGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   AL+  +      ++           AL+SK++D +      +  R+     +   
Sbjct: 67  VELSEALAKELGVK---VKLQATPWDGILAALESKRLDAVVNQVTISEERKKKYDFSKPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I +   L+G  + V  GT  E  L D    +  K     +    
Sbjct: 124 TVSGIQALVLKKNVDTIKTADDLAGKKVGVGLGTNYEQWLKD----NQPKAIIKTYNDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +  R DA   D  A         +  +     D  S+     A+ +G+ E  + 
Sbjct: 180 TKFQDLKVGRIDAILIDRLAALEY---AKKAPDTAAAGDAFSRQESGIALRKGEPELLDA 236

Query: 241 VSWTH 245
           V+   
Sbjct: 237 VNKAL 241


>gi|256844635|ref|ZP_05550120.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256613176|gb|EEU18380.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN]
          Length = 272

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 89/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K F +  SI+ L  L  +    N   ++   +K    +  G+      F  +    G 
Sbjct: 1   MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFGSINIKTGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D   AL+  +    +K  ++   A  +   L++  +D +      T  R+    
Sbjct: 61  LNGFEIDLANALTHEMLGKNAKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKK--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++     I +   L+   + V  GTT    +             + 
Sbjct: 119 VEFSHPYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAPKA----EILQ 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +  AA +A + DA+  D   L          S + ++    +  P   A+ +G  
Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAG---ILRDSSGYKLVGGTFTNQPYGIAVNKGQN 231

Query: 236 EWYNIVSWTH 245
           +    ++   
Sbjct: 232 DMLKHINTAL 241


>gi|167824254|ref|ZP_02455725.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 9]
 gi|226196401|ref|ZP_03791983.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|225931618|gb|EEH27623.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei Pakistan 9]
          Length = 271

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 92/253 (36%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M    F + L  + L     + +A  L DI+K G L+         F  V        G 
Sbjct: 1   MKFKPFATWLLGLSLVAAHAAAHADRLDDIRKAGVLRVATFDSNPPFGFVDPRTNRIVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ +AL+  +      ++  P N   R   L S ++D++  N   T  R     + F 
Sbjct: 61  DVDYAQALADRLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F+  K   + S  QL+   I    GTT E+TL + +         + ++  
Sbjct: 116 VPYFASGQQFLAKKG-ALKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA RA    A T D   L  L         + +    IS   +     +G+     
Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGEPRLVA 230

Query: 240 IVSWTHYAMVTAE 252
            V+ T   +  + 
Sbjct: 231 FVNETLTDLEASG 243


>gi|186474262|ref|YP_001861604.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184196594|gb|ACC74558.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 270

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 84/248 (33%), Gaps = 12/248 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              +++     F ++ +    +L  +K  G L+ G+      F    A+G+ +GFDVD  
Sbjct: 11  LRGAVIATAFSFVSASAHAQDLLETVKSSGVLRVGLEGTYPPFDYKNASGELEGFDVDVA 70

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +A+++ +   P   Q++P         LQ+ + D++      T  R     L F     F
Sbjct: 71  KAVAARLGVKP---QFVPTEWSGILAGLQAGKFDVIVNQVTITPQR--KQALDFSQPYTF 125

Query: 125 DGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                I         +S+++ SG         T      D         +   +    E 
Sbjct: 126 SAAQLIQRVDDKREFNSLAEFSGDKKLGVTLGTNY----DQMARTVSGINVQTYPGAPEK 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                A R DA   D   L  +  T+  P     +     +  +     +G+  +   ++
Sbjct: 182 LRDLSAGRIDATLDDRLMLPYIIKTSKLPLRAGDVVKGAEQE-MGIPFRKGNPGFEKAIN 240

Query: 243 WTHYAMVT 250
               +M  
Sbjct: 241 DALSSMKQ 248


>gi|241765002|ref|ZP_04762998.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241365399|gb|EER60192.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 297

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 7/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M    +     L  L   S  +  ++L  +   G L        V F+ +    G   G+
Sbjct: 1   MKVRHWGLAWGLAALCGVSAVSAQTVLEKVSAGGALVIAHRESSVPFSYIDPKSGKPIGY 60

Query: 60  DVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D C  L+             ++ L + A  R   ++  + D+   +T     R     
Sbjct: 61  AIDLCLRLADVVRKKTGMKDMPVEMLQVTAANRLAMVEQHKADLECGSTTNNAER--RQK 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF    Y  G   ++     I  +  L+G  +    GTT         ++H M    + 
Sbjct: 119 VAFTVPHYITGARLLVKASSSIDRLEDLAGKKLVSTKGTTPLKAAEQANRSHLMGITIVE 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               E           DA+  D   LY L      P+   ++   ++  PLA  + + D 
Sbjct: 179 APDHERGVEMVEKGEADAFLMDDVLLYGLAAGRPHPAALKVVGRFVTTEPLAIVLPKNDP 238

Query: 236 EWYNIVSWTHYAMVTAEE 253
           E+  +V      ++T+ E
Sbjct: 239 EFKKLVDDEMRRLITSRE 256


>gi|238759568|ref|ZP_04620730.1| Extracellular solute-binding protein, family 3 [Yersinia aldovae
           ATCC 35236]
 gi|238702227|gb|EEP94782.1| Extracellular solute-binding protein, family 3 [Yersinia aldovae
           ATCC 35236]
          Length = 284

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 86/230 (37%), Gaps = 13/230 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           S + +A  L DIK+ G ++  +      F  +        G+DVD   A++  +      
Sbjct: 24  SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDIANAIAQDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L SK++D+++ N   T  R     + F    +  GQ FI HK   +
Sbjct: 81  VELRATNPANRIPLLISKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPVAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + L  L          +  I P  I+K      I +G+      V+ T 
Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTTQVNETL 243


>gi|222153139|ref|YP_002562316.1| amino acid ABC transporter extracellular amino acid-binding protein
           [Streptococcus uberis 0140J]
 gi|222113952|emb|CAR42208.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus uberis 0140J]
          Length = 277

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 79/252 (31%), Gaps = 12/252 (4%)

Query: 2   YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K    ++     LF  +     +         KK   +  G +   V       +G   
Sbjct: 4   KKILLTTLALASTLFLVACGKSSAAKTDQWDTYKKEKSITLGFDNTFVPMGFKDESGKNT 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+  +A+         K+++ P+N   +   L++ +ID++      T  R+    +A
Sbjct: 64  GFDVELAKAVFQEYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSVTKERQA--KVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174
           F      + Q  +  K   I+S + + G  +  Q+G++         K            
Sbjct: 119 FSTPYMKNEQVLVTKKSSNITSFAAMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDKDAT 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E   +     +  R D    D              + + I+         A  + + D
Sbjct: 179 QYETFTQAFIDLKNDRIDGLLIDKVYANYYLKQEGELTNYNIVKSEFDGEDFAVGVRKED 238

Query: 235 TEWYNIVSWTHY 246
                 ++    
Sbjct: 239 KTLLKNINSAFT 250


>gi|223932262|ref|ZP_03624265.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
 gi|223898943|gb|EEF65301.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
          Length = 266

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 90/262 (34%), Gaps = 16/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   ++   L  L   + S+  + S L  IK++G L    +     F     V    +
Sbjct: 1   MKKILALAATVLAGLTLVACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+   + ++  +      ++   ++      ++Q+ + DI      ++  R     
Sbjct: 61  VVGADIMLAQKIADELGVK---LEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKV-- 115

Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      ++ K     ++S+  +SG ++ VQ G+T E    +     N     
Sbjct: 116 FDFSESYYQISDVLLIKKDSDNSLTSIDAMSGKTLAVQKGSTQESYAQENISQAN----L 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     ++ + DA   D          N   +   +    I ++    A+ +G
Sbjct: 172 ISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKG 231

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
            TE    +      +  + E  
Sbjct: 232 STELKTAIDKVIAEVKASGEFD 253


>gi|121593035|ref|YP_984931.1| extracellular solute-binding protein [Acidovorax sp. JS42]
 gi|120605115|gb|ABM40855.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 296

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 7/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  + ++   + L     +    +L  ++  G L        V F+ V   G   G+ +D
Sbjct: 4   KQGWKALGAAVALCCAVGAQAQGVLERVRGGGPLVLAHRESSVPFSYVHE-GKPMGYALD 62

Query: 63  FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  ++             +Q + +    R   +++ + D+   +T     R   +   F
Sbjct: 63  LCLHIAEVVRKKTGMKNMPVQLVQVTPANRIEMVKTGKADMECGSTTNNAERRKDVA--F 120

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +  G   ++     ++ +  L G  +    GTT         +   M+   +    
Sbjct: 121 TIPHFITGARLLVPAASSVTRMEDLEGKKLVSTKGTTPYKAAEQANRERLMRIQLVEAPD 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E         + DA+  D   LY L      P    ++   ++  PLA  + + D E+ 
Sbjct: 181 HEAAVVMVEKGQADAFVMDDVLLYGLAANRPDPKALKVVGRFVTTEPLAIMLAKNDPEFK 240

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      ++ + E+ 
Sbjct: 241 KLVDEEMRRLIVSNEIN 257


>gi|220913267|ref|YP_002488576.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
 gi|219860145|gb|ACL40487.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
          Length = 295

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 82/235 (34%), Gaps = 9/235 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              + +  +   G +K G       F +V  +G   GFDV+  + +++ +     KI++ 
Sbjct: 46  AAGTTMEKLSSAGTIKIGTKFDQPLFGQVGLDGKPVGFDVEIGKLIAAKLGIAADKIEWS 105

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140
              +  R   ++  ++D++         R     ++F    Y  GQ  +++K    I   
Sbjct: 106 ETVSANREPFIEQGKVDLVIATYTINDKR--KQVVSFAGPYYEAGQALMVNKDNDSIKKP 163

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  +C   G+T   T+ D + A       +            R  + +A T D   
Sbjct: 164 EDVKGKKVCSVTGSTPAATIVDKYGA-----ELVPAATYSACLEPLRNKQVEAVTTDNVI 218

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L             +   +  +K P    + + D E+ N ++    A     +  
Sbjct: 219 LAGFVDKEPDA-FKLASDETFTKEPYGIGLKKDDAEFRNWINDQLEAFEKDGDYK 272


>gi|157884161|pdb|2V25|A Chain A, Structure Of The Campylobacter Jejuni Antigen Peb1a, An
           Aspartate And Glutamate Receptor With Bound Aspartate
 gi|157884162|pdb|2V25|B Chain B, Structure Of The Campylobacter Jejuni Antigen Peb1a, An
           Aspartate And Glutamate Receptor With Bound Aspartate
          Length = 232

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 8/220 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L  IK +G L  G+   +  +A +  A G+ KGF+VD  + L+ +I  D  KI+ + +
Sbjct: 1   GKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAV 60

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           NAK R   L +  +D +      T  R+      F    Y D  G ++ K+K   S++ +
Sbjct: 61  NAKTRGPLLDNGSVDAVIATFTITPERKRI--YNFSEPYYQDAIGLLVLKEKKYKSLADM 118

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA+I V    TT+  + +  K   +      F     I AA  A R DA++ D S L  
Sbjct: 119 KGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLG 178

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                       ILPD            + D  +   V  
Sbjct: 179 YVDDKS-----EILPDSFEPQSYGIVTKKDDPAFAKYVDD 213


>gi|73542273|ref|YP_296793.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72119686|gb|AAZ61949.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 270

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 14/246 (5%)

Query: 3   KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K    + L       ++ +   A +L  +K+ G LK G+      F       +  GFDV
Sbjct: 10  KSLLAASLIAGAAGLSATAASAADLLDTVKQAGVLKIGLEGTYPPFGFRNPKNELDGFDV 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RA+++ +   P    ++          LQ+ + D++      T  R+    L F   
Sbjct: 70  DVARAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVSVTPQRK--QVLDFSTP 124

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     I  K      +S+  L G  + V  G+                     +   
Sbjct: 125 YVYSAAQLIQRKDDKREFNSLEALKGHKLGVSLGSNYNE-----LAKSVPGIDVKTYPGA 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   +    +               + + +A    + + ++  
Sbjct: 180 PEYLRDLAAQRVDAALNDR-LMVNYLIKTANLPLRPGAVVAGANAEVAIPFRKDNPKFAQ 238

Query: 240 IVSWTH 245
            +    
Sbjct: 239 AIDHAL 244


>gi|225854142|ref|YP_002735654.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae JJA]
 gi|225722741|gb|ACO18594.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae JJA]
          Length = 254

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQGDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S       + +TE+ + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEFNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|308185786|ref|YP_003929917.1| ABC transport system, periplasmic protein precursor [Pantoea vagans
           C9-1]
 gi|308056296|gb|ADO08468.1| putative ABC transport system, periplasmic protein precursor
           [Pantoea vagans C9-1]
          Length = 261

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 95/245 (38%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++    +L   + S  A  L +I+KRG ++  +      F  V  +   +G+D
Sbjct: 1   MKK-VLMAVATAALLMAQTGSALADQLQNIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L+  +     K+Q +P+++  R   LQ+ ++D++  +      RE    + F  
Sbjct: 60  IDTAKYLAKQM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFTR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   I + S LSG SI V  G   ++ L++             +E   
Sbjct: 115 AYAPFFLGVFGPKGDEIKAASALSGKSIGVTRGAVEDMVLSEVAPK---DAQVKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + +          + A+      P++  +   ++  SP    + + +      
Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAIARQ--NPAKAPVAQFMLKDSPCYIGLKKDEPALKAK 229

Query: 241 VSWTH 245
           V+   
Sbjct: 230 VNELI 234


>gi|238893281|ref|YP_002918015.1| cysteine transport system periplasmic binding component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238545597|dbj|BAH61948.1| cysteine transport system periplasmic binding component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 283

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78
               A  L DIK  G +K         F  V A      G+DVDF +AL+ A+      +
Sbjct: 33  SQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALGVK---L 89

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + +  N   R   LQS + D++  +   T  R  +  + F    +  GQ F++       
Sbjct: 90  ELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSTPYFVTGQQFLVPAGSP-D 146

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            + + S A I    GTT E  L   F         + ++ +     A R     A T D 
Sbjct: 147 KLDEYSKARIGAVKGTTGEQALHQRFPQA----RVLSYDDIPLALTALRNGNVQAITQDS 202

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           + L  L       ++  ILPD++SK  +   + +G+      V+     +    E
Sbjct: 203 TILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVNDELVKLEKTGE 257


>gi|119713445|gb|ABL97506.1| extracellular solute-binding protein family 3 [uncultured marine
           bacterium HOT0_02H05]
          Length = 299

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F +  L L++   +  +     IL  I++ G +  G       FA +   G+W G+
Sbjct: 1   MKKKFVLFALTLLLTATSQNAVWAGEILERIRQTGVITAGTRKDATPFAYINEKGEWVGY 60

Query: 60  DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +          P +++ + +  + RF  +++K+IDI   ++ +T  R+    +
Sbjct: 61  SIDILEIIRQNVEKELGKPIRLKLVEVTPQNRFNKVKNKEIDIECASSTFTWERDKI--I 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K   + ++  L+G  I V   TT E  +     A       +  
Sbjct: 119 DFSVSYFASGTKIMRKKGSSLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAA----IIVPI 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E     +    +A  GD   L AL+L N+      ++P+        A  I + ++
Sbjct: 175 KNRIEGLEKLKKGEIEAIAGDGIVLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDES 234

Query: 236 EWYNIVSWTHYAMVTA 251
            W  +V+++    +  
Sbjct: 235 AWRGMVNYSLVKFMEG 250


>gi|328886196|emb|CCA59435.1| Glutamate-binding protein of ABC transporter system [Streptomyces
           venezuelae ATCC 10712]
          Length = 305

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 83/227 (36%), Gaps = 10/227 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++S     KKRG L  G         E     G + GFD++  + +++++  DP+ I + 
Sbjct: 53  DSSTWNRAKKRGHLVVGAKEDQPYMGERDPATGRYSGFDIEIAKMMAASLGFDPAGISFR 112

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQ+ QID           R+  +G  F    Y  GQ  ++      I   
Sbjct: 113 TIASANRETALQNGQIDYYVGTYTINDNRKKLVG--FAGPYYLAGQSLLVRTDENDIHGP 170

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  +C  AG+T    +   +         + ++           ++ DA T D + 
Sbjct: 171 QDLAGKRVCSAAGSTPYQRIQKDYPKA----ELVAYDTYSACVDNLLTYQVDAVTTDDTI 226

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           L         P E  ++    SK P    + + D      +     A
Sbjct: 227 LMGYAAKV--PDELKVVGKPFSKEPYGIGVPRNDNALRFALDDALAA 271


>gi|241664890|ref|YP_002983250.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240866917|gb|ACS64578.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 302

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS- 76
           +  +  L  I+  G +  G     + F+ +       G+ +D C  L  ++      P  
Sbjct: 29  AAASPTLDRIRDSGTVHVGYREDSIPFSYLDGT-KPVGYAIDICSRLIDSLRTSLKRPDL 87

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K+QY+P+ A  R   + + + D+   +T      E    +AF    Y      ++     
Sbjct: 88  KVQYVPVTAANRLDVIATGKADLECGST--NNSPERRQKVAFTIPHYITKGRMLVKANSP 145

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I     L+G ++ V A  +T   LA       M    +    +    A     R  A+ G
Sbjct: 146 IQQWEDLNGKTV-VAARGSTNADLARKLNETGMTMQVVDANDLRSAFAMLTDGRAQAFAG 204

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           D   L  ++     P+++ +       S  A  + + D E+  ++  +   ++   E
Sbjct: 205 DDILLSGMRAMAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRLIVDGE 261


>gi|313900555|ref|ZP_07834048.1| ABC transporter, substrate-binding protein, family 3 [Clostridium
           sp. HGF2]
 gi|312954617|gb|EFR36292.1| ABC transporter, substrate-binding protein, family 3 [Clostridium
           sp. HGF2]
          Length = 272

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 77/217 (35%), Gaps = 8/217 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +  L  GI+           +G   GFDV+   A+S  I      +++  ++   +   
Sbjct: 45  DKEVLTIGIDDTFAPMGFK-KDGKLVGFDVELAEAVSKKIGKK---VEFQNIDWDLKETE 100

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L+S  ID++      T  R+    + F      + Q  I   K GI + + +   ++ VQ
Sbjct: 101 LESGNIDLIWNGYSITEERKK--QVLFSDPYMENRQIIITTDKTGIKTKADIKDKTLSVQ 158

Query: 152 AGTTTELTL--ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             ++    +     F A      P  F+   +      + R DA   D +         D
Sbjct: 159 KNSSAYDAVMKDKDFVAGLKDGKPTQFDTNNDCFMDLESGRSDAIVVDETLARYYMKQQD 218

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +V+L +   K   A  + + DTE    ++    
Sbjct: 219 NGVNYVVLDENFGKEEYAIGMRKDDTELCKHINKAMQ 255


>gi|118586387|ref|ZP_01543836.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433174|gb|EAV39891.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus
           oeni ATCC BAA-1163]
          Length = 287

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
                ++   ++  ++ + N S        +K+ G ++ G+      F  +    G  +G
Sbjct: 15  IILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTGQPEG 74

Query: 59  FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           FDVD  +AL+  +      P +  +  + +  R   L++  ID        T  RE    
Sbjct: 75  FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKV-- 132

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K  GI S+  L+ +   +     +   +    K    K   + 
Sbjct: 133 IDFSNSYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVI--NVKKFAPKAKVLA 190

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                +  AA +A +  A T D   LY L    + P  + ++    +  P   A      
Sbjct: 191 LGDYGQAMAALKAGQGQALTTDNGILYGLAT--ENPG-YTVVGGTFTSEPYGVAFDNNQP 247

Query: 236 EWYNIVSWTHYAMVT 250
           E     +    A++ 
Sbjct: 248 EMVKQTNKALKAIIA 262


>gi|330962036|gb|EGH62296.1| cystine transporter subunit [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 265

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 78/245 (31%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L++    +        L  IK+ G L  G+      F+ V   G   GF+
Sbjct: 7   RRTFLFSALSLMLGSGIAGQAMAGEQLQKIKESGTLNVGLEGTYPPFSFVDEKGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   AL+  +                   AL SK++D++      +  R+     +   
Sbjct: 67  VELSEALAKELGVKAKVQPSK---WDGILAALDSKRLDVVINQVTISDERKKKYDFSQPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S   L+G  + V  GT  E  L    K +        +E   
Sbjct: 124 TVSGIQALVLKKNADAIKSAQDLTGKKVGVGLGTNYEQWL----KENVPGAVVKTYEDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D   L AL++      +        S+     A+ +G+ E    
Sbjct: 180 TKIQDLSVGRIDAILVDR--LAALEIAAKTKGKLAPAGAAFSRQASGIALRKGEPELQAA 237

Query: 241 VSWTH 245
           ++   
Sbjct: 238 INQAL 242


>gi|300311472|ref|YP_003775564.1| amino acid ABC transporter/signal transduction system periplasmic
           protein/domain-containing protein [Herbaspirillum
           seropedicae SmR1]
 gi|167731101|emb|CAP19663.1| periplasmic component protein [Herbaspirillum seropedicae]
 gi|300074257|gb|ADJ63656.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 267

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 16/254 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
            K + ++ +   +L  +   + A +L  +K  G LK  +      F       G+  GF+
Sbjct: 5   IKQWLLAGVGAALLASSLSVSAADLLQSVKSSGTLKVALEGNYPPFNFKDPKTGELTGFE 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + L++ +   P    +           L + + D++      T  R+      F  
Sbjct: 65  VDVAKLLAAKLGVKP---VFTTTEWSGILAGLGAGKYDVIINQVGITDERQK--AFDFSD 119

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    I+ K +     S+  L G  + +  GT  E                  +  
Sbjct: 120 PYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKAV-----PGIDVRTYPG 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E  A   A R DA   + S L    L +         P I +   +     +G+ E+ 
Sbjct: 175 SPEYLADLAAGRIDA-ALNDSLLVGYILKSTNLPLKAGSP-IGAVDKIGIPFRKGNPEFK 232

Query: 239 NIVSWTHYAMVTAE 252
             ++    A + A+
Sbjct: 233 AALNKAL-ADIKAD 245


>gi|329927214|ref|ZP_08281512.1| ABC transporter, substrate-binding protein, family 3 [Paenibacillus
           sp. HGF5]
 gi|328938614|gb|EGG34997.1| ABC transporter, substrate-binding protein, family 3 [Paenibacillus
           sp. HGF5]
          Length = 256

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 89/251 (35%), Gaps = 19/251 (7%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K         + L+ +   S S +            L  GI+           + +  
Sbjct: 1   MVKKIASVLAGFMLLLTVVGCSSSASGG--------NELVVGIDDKFAPMGFRDESNEIV 52

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D+ RA +  +  +   +++ P++ K +   L S +ID++      T  R+    + 
Sbjct: 53  GFDIDYARAAAEKMGKE---VKFQPIDWKAKESELSSGRIDLIWNGYTITDERKE--KVL 107

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F      + Q   +     I+++  L+G  + +Q+ ++    L+       +K +   F 
Sbjct: 108 FTKPYLENSQVVAVLNDSDIATIGDLAGKQVGLQSLSSAADALSANAIHEQVK-NISEFP 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                 +  +  R DA   D   +       +    + IL + ++       + +G+ E 
Sbjct: 167 DNVLALSDLKNGRVDAVIIDEVVMKYYMSKEE--GTYKILEESLAPEQYGIGVKKGNEEL 224

Query: 238 YNIVSWTHYAM 248
              +      M
Sbjct: 225 LESLQKALDDM 235


>gi|288936965|ref|YP_003441024.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|330005632|ref|ZP_08305310.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|288891674|gb|ADC59992.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|328536198|gb|EGF62579.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 279

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 90/250 (36%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M       +  ++ L   S +  A +L DI  RG LKC + + +  F+          G 
Sbjct: 1   MKLKRNAGLALVLTLVAVSGAARADMLADIHARGELKCAVYSDVPPFSAPDPKTRQLVGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+ C AL+  +      +     + + R   + + + D+L  N  +T  R   +   F 
Sbjct: 61  DVELCHALAKQMGVKAQLVP---TSVEARIAIIATGRADVLIANLAYTKTRGRQIQ--FS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  ++ +     +++   G  I    GTT+E ++            P+ F+  
Sbjct: 116 DPYYVAKEMLLVKEANADKTLADFKGKRISATKGTTSEQSIV------LKGGKPVTFQDA 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A   ++   +  +      +            ++ + ++  P+   + QG+ +  
Sbjct: 170 ASAFLALEQNKVLGFVTNTMTGIKMIGQAKKDGINLAMIKEPMALEPIGVGMKQGEPQLL 229

Query: 239 NIVSWTHYAM 248
             V+ +   M
Sbjct: 230 ASVNESLKVM 239


>gi|87121142|ref|ZP_01077033.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Marinomonas sp. MED121]
 gi|86163634|gb|EAQ64908.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Marinomonas sp. MED121]
          Length = 267

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 92/248 (37%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S + + ++ F+S + +A  L DIK +G L   +      +      G+  G +
Sbjct: 1   MKKITTISSILISLIGFSSVT-HADDLADIKAKGTLVVAVKADYKPYGYRNDQGEIVGLE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +      ++ +P  +  R   L   ++D+L         R   L      
Sbjct: 60  IDLAQNVAERLG---VSLELVPAQSSNRMQFLIDGKVDLLIATMSDKPER-RELVYIADQ 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G   I  K    +S   L+G  +C   G          F A       + F   E
Sbjct: 116 AYYSSGSNIIAKKSSQYTSWGDLNGQKVCGIKGAFYNQETETTFGA-----TIVPFGSSE 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA +  +C+A+  D S +           ++ +    I+ +P   A+  G+  ++  
Sbjct: 171 ESLAALKQGKCNAFVYDDSFIAGKLNDPQWSQDYEMPLPTINDNPWGLAVRLGEDNFHAF 230

Query: 241 VSWTHYAM 248
           ++ T    
Sbjct: 231 MNSTIIDW 238


>gi|283785107|ref|YP_003364972.1| putative periplasmic solute-binding protein of ABC transporter
           [Citrobacter rodentium ICC168]
 gi|282948561|emb|CBG88152.1| putative periplasmic solute-binding protein of ABC transporter
           [Citrobacter rodentium ICC168]
          Length = 272

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 91/246 (36%), Gaps = 12/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M K    +   ++    T  +  A  L DIK  G LK         F  V        G+
Sbjct: 4   MKKSPL-AFGVMLAAALTVTAAQADQLADIKAAGVLKVATFDANPPFGSVDPKTHQIVGY 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDF  AL+ ++      ++ +  N   R   LQS + D++  +   T  R     + F 
Sbjct: 63  DVDFANALAQSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPERARV--IDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ F++        + + S A I    GTT E  L   F     +   + ++ +
Sbjct: 118 VPYFVTGQQFLVPATSP-DKLEEYSRARIGAVKGTTGEQALHQRFP----QSRVLAYDDI 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A R     A T D + L  L       +   ILPD++SK  +   + +G+     
Sbjct: 173 PLAFTALRNGNVQAITQDSTILAGLLGGAPDKANFKILPDLLSKEEIGVGVKKGEPALLK 232

Query: 240 IVSWTH 245
            V+   
Sbjct: 233 AVNDEL 238


>gi|115351507|ref|YP_773346.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115281495|gb|ABI87012.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 264

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNAKNPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +        ++          LQ+ + D+++     T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFQKAIDDAMT 239


>gi|257459775|ref|ZP_05624884.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257443200|gb|EEV18334.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 269

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 10/240 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L   I+F       A  L  I+  G +K G+  G   F+  + +G+++GF+++   A++ 
Sbjct: 3   LLFCIIFTLCSGVFAGSLEQIRSAGVVKIGVRDGRPPFS-DEKSGNFEGFEINLADAIAK 61

Query: 70  AIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +IF D   +++++PLNA +R  ALQ+ ++D+       T+ ++    + F    +    G
Sbjct: 62  SIFGDKRGRVEFVPLNASDRISALQNDKVDLAVA--TITITQDRKRQIDFSYPYFSMSLG 119

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  K  GI S+  LS   + V+   TT        K HN     I      E     + 
Sbjct: 120 VLTRKSDGIKSIDDLSNKKVLVEGNGTTAENFLYKNKIHN----LIHCSITTECYDMLKQ 175

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            + DAY  D   + A  + +D     V + ++ +   L   + +G+TE  ++++    A+
Sbjct: 176 GKADAYVNDNLIVLAYSIIDDNLE--VAIQNLGNPEFLGIGVRKGNTELLDLINKELVAL 233


>gi|67923258|ref|ZP_00516743.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
 gi|67854884|gb|EAM50158.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
          Length = 300

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F +  L L++   +  +     IL  I++ G +  G       FA +   G+W G+
Sbjct: 2   MKKKFVLFALTLLLTATSQNAVWAGEILERIRQTGVITAGTRKDATPFAYINEKGEWVGY 61

Query: 60  DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +          P +++ + +  + RF  +++K+IDI   ++ +T  R+    +
Sbjct: 62  SIDILEIIRQNVEKELGKPIRLKLVEVTPQNRFNKVKNKEIDIECASSTFTWERDKI--I 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +  G   +  K   + ++  L+G  I V   TT E  +     A       +  
Sbjct: 120 DFSVSYFASGTKIMRKKGSSLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAA----IIVPI 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235
           +   E     +    +A  GD   L AL+L N+      ++P+        A  I + ++
Sbjct: 176 KNRIEGLEKLKKGEIEAIAGDGIVLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDES 235

Query: 236 EWYNIVSWTHYAMVTA 251
            W  +V+++    +  
Sbjct: 236 AWRGMVNYSLVKFMEG 251


>gi|315650943|ref|ZP_07903983.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
 gi|315486789|gb|EFU77131.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
          Length = 279

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 81/275 (29%), Gaps = 23/275 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS-------TNASILGDIKKRG---------FLKCGINTGL 44
           M K +   +L  ++L   S +        +        + G             G +   
Sbjct: 1   MKKIYLFGVLAALMLAGCSTAKTTESTSASQETSKTASESGKAADADNKNTFTVGFDQDF 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                V  +G + GFD+D    ++  +  +   I+Y P+    + + L S  ID +    
Sbjct: 61  PPMGFVGDDGQFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELSSGTIDCIWNGF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                 +      +      + Q F++     I S+  L+G  + VQA ++ E  L    
Sbjct: 118 SIQGREDK---YTWSKPYMKNDQVFVVKSGSNIDSIEDLAGKKVEVQADSSAEAALKADP 174

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                                      DA   D S +   ++T    S   +L   ++  
Sbjct: 175 DMVKTFDSLQTVADYNTGFMDLDMGGVDAIAMD-SVVANYQITKRGGSGFTVLDTPLASE 233

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                   G+    + V      M     L    +
Sbjct: 234 EYGIGFKLGNESLRDEVQAKLDEMKADGSLKTISE 268


>gi|160936778|ref|ZP_02084144.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440270|gb|EDP18016.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC
           BAA-613]
          Length = 324

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 87/285 (30%), Gaps = 48/285 (16%)

Query: 1   MYKDFFVSILCLIILFFTSF------------------STNASILGDIKKR--------- 33
           M K  F   L  ++    +                    T A      +           
Sbjct: 22  MKKRLFSLALASVMALSLAGCGGSKEAATEAETKAETEQTAADTSAKAEDTTAQEETKAE 81

Query: 34  -------------GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
                        G L  G +        +  NG++ GFD++  + ++  +  + +    
Sbjct: 82  SEAASEAVSESAGGTLIVGFDQDFPPMGFMGDNGEYTGFDLELAKEVAERLGLEYTA--- 138

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+    + + L++  ID +      T   +      +      + Q F++ K  GI+S 
Sbjct: 139 QPIAWDSKDMELEAGNIDCIWNGFTMTGRED---DYTWSEPYMANTQVFVVAKDSGIASQ 195

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G  +  Q  ++ E  L +           +                 DA   D   
Sbjct: 196 ADLAGKIVECQVDSSAEAALKEVPDLTATFKQLLTTADYNSAFMDLEQGAVDAIAMD--V 253

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + A      R ++ +IL D +S         +G+TE  + V  T 
Sbjct: 254 IVAGYQIQQRNADFIILEDSLSAEEYGVGFKKGNTELRDKVQATL 298


>gi|295693562|ref|YP_003602172.1| amino acid ABC transporter, amino acid-binding protein
           [Lactobacillus crispatus ST1]
 gi|295031668|emb|CBL51147.1| Amino acid ABC transporter, amino acid-binding protein
           [Lactobacillus crispatus ST1]
          Length = 271

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 12/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K      L +I+      S             I  +  +  G++   V     K NG 
Sbjct: 1   MKKWILGIALAIILFLTGCQSVQKEANTQDTWNKIASKKQVVIGLDDSFVPMGFEKKNGQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A+         K+ +  ++       L++  ID+L      T  R+    
Sbjct: 61  LTGYDIDLAKAVFRQYG---IKVSFQTVDWSMNVTELRNGTIDLLWNGYSITPERKK--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +AF      + Q  ++ K  GI S  Q+    + +Q G+T E          + K   ++
Sbjct: 116 VAFSKPYLRNRQVLVVKKDSGIRSFKQMKQYELGMQTGSTAEQWYETKQDVLHAKKT-VL 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234
           ++ +        A R      D            + SE+ ++  D +     A  + +GD
Sbjct: 175 YDTISNSFLDLNAGRIQGILLDEVYADYYIAHMAKSSEYKVIQNDRVPMDLFAVGMRKGD 234

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 235 KTLRKRVNEGL 245


>gi|302874467|ref|YP_003843100.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|307690926|ref|ZP_07633372.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|302577324|gb|ADL51336.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
          Length = 261

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 15/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   +    +  +   +    +    ++L  +K+   LK G+ +G         N   
Sbjct: 1   MKKKLLLLATAVFCVAGIATGCKSKETTNVLDKVKEAKVLKVGLESGFAPLEYKDENDKL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD   A+   +      ++++         +L+    DI+    + T  R+    +
Sbjct: 61  VGFDVDLANAIGDKLGVK---VEFVDTAFDTITQSLKKNDFDIIIAGLNITEERKK--EI 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       GQ  I+       +  +            TT L  A+           + +
Sbjct: 116 DFTEPYIMSGQSIIVQSSNKEITSEEGLKGKKVGVGKGTTSLEFAEGMSGLG---EIVEY 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E V       +  R DA   D   +          + +  +   + K P+  A+ +G TE
Sbjct: 173 EDVPSELMDLKIGRIDAVIVDE--VVGDFYVAKDKTAYKKV-VALGKEPMGIAVDKGQTE 229

Query: 237 WYNIVSWTHY 246
             + V   + 
Sbjct: 230 LLDAVQKAYN 239


>gi|331266481|ref|YP_004326111.1| ABC transporter substrate binding lipoprotein-amino acid transport
           [Streptococcus oralis Uo5]
 gi|326683153|emb|CBZ00771.1| ABC transporter substrate binding lipoprotein-amino acid transport
           [Streptococcus oralis Uo5]
          Length = 279

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 90/254 (35%), Gaps = 14/254 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     +L L    F T+ +  AS          +K+G +  G +   V     + NG
Sbjct: 1   MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D  +A+S  +     KI++ P++   +   LQ+  ID +      T  R+   
Sbjct: 61  QYAGFDIDLAQAVSEKLG---IKIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            +AF      + Q  +  K + I S+  ++   +  QAG++  L      +  K      
Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQAMTDKVLGAQAGSSGYLNFEGQPELLKNRVKDQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R DA   D         +    +++ +          A  + 
Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235

Query: 232 QGDTEWYNIVSWTH 245
             D      ++   
Sbjct: 236 PADKTLLAALNQAL 249


>gi|121602131|ref|YP_988959.1| putative glutamate/aspartate ABC transporter, permease
           protein/periplasmic glutamate/aspartate-binding protein
           [Bartonella bacilliformis KC583]
 gi|120614308|gb|ABM44909.1| putative glutamate/aspartate ABC transporter, permease
           protein/periplasmic glutamate/aspartate-binding protein
           [Bartonella bacilliformis KC583]
          Length = 460

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 6/243 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72
             +        L  IK+ G +  G+     G A    NG + GF  +    + + I    
Sbjct: 175 LTSVAHAQNDTLERIKQTGRITLGVRESS-GLAYALGNGRYTGFHTEMAENIINDISKKI 233

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             P +I+YLP+ ++ R   LQ+   D    +T     R     +AF   TY +     + 
Sbjct: 234 GKPIRIRYLPITSQNRIPLLQNNTYDFECGSTTNDTARGR--SVAFAYTTYVEEVRIAVK 291

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K  GI S+  L+G +I    GTT    +    +A N+ +  I      +      + R D
Sbjct: 292 KDSGIKSIQDLNGKTIATTTGTTAVQLIRQNGRAKNINFRVINGRDHADSFLLLESGRAD 351

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A+  D S L      +  PS+++IL  ++S  P+A  +   D  +   ++ +  + +   
Sbjct: 352 AFIMDSSILAGSISRSRNPSDYMILDAVLSVEPIACMLRLEDKNFEQAINDSIVSQIKDG 411

Query: 253 ELG 255
            L 
Sbjct: 412 SLE 414


>gi|225868655|ref|YP_002744603.1| amino acid ABC transporter, extracellular amino acid-binding
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701931|emb|CAW99453.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 278

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 13/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K   V++         +   +     +      K++  +  G +   V       +G  
Sbjct: 4   KKTLLVALFAATATLLVACGASNKQTSSDAWNSYKEKKTITLGFDNTFVPMGYKDESGKN 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD++  +A+         K++Y  +N   +   L + +ID++      T  R+    +
Sbjct: 64  TGFDIELAKAVFDQYG---IKVKYQAINWDLKETELNNGKIDLIWNGYSVTKERQA--KV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173
           AF  +   + Q  +  K   ISS + +   ++  Q+G++       + K           
Sbjct: 119 AFTELYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGNDA 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     +  R D    D                + I+         A  + + 
Sbjct: 179 TQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRKA 238

Query: 234 DTEWYNIVSWTHYAM 248
           D      ++    ++
Sbjct: 239 DKTLQKKITQALKSL 253


>gi|159905111|ref|YP_001548773.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159886604|gb|ABX01541.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 260

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 88/246 (35%), Gaps = 11/246 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + ++  ++ F       AS         G L  G +     F E  A+G+  GFD
Sbjct: 5   KKLILLGLVVSLVAFSGCTEDQASAKSSMTMTEGILVVGTDPTFPPFEEKNADGELVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +  +   IQ++         AL++++ D +      T  R   +   F  
Sbjct: 65  IDLMKALGEKMGIE---IQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVA--FTN 119

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q   ++     + SV  L+G  +  Q GTT E     Y +          +E +
Sbjct: 120 SYFDAAQVIAVLVDDDSVQSVDDLAGKVVAAQLGTTGEYEAQHYAEELGF--EIKSYEVM 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R +A   D     A +  + +P  + ++ + ++      A    + E  +
Sbjct: 178 ADAFIDMENGRVNAVVTDD--GVAQRFLDTKPGVYKVVGEPMTAESYGLAANLDNQELID 235

Query: 240 IVSWTH 245
            ++   
Sbjct: 236 AINAAL 241


>gi|330819483|ref|YP_004348345.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
 gi|327371478|gb|AEA62833.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
          Length = 257

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++LC+  L  T  +  A      +    L    +        V   G   GFD
Sbjct: 1   MK---LKALLCVASLGMTLLTAIAPGTASAQASSVLNVATDATFPPMEFVD-KGQRTGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL+ A+     ++Q+  ++ K     L +++ D        T  R  +  + F  
Sbjct: 57  IDIMNALAKAMGK---QVQWTDIDFKGLVPGLVARRFDAAISGIYITPER--AQVVDFTQ 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   ++     I +++ L+G  + VQ GT +   L D    +  +   +  E+ +
Sbjct: 112 SYFAGGLSVLVKADSPIKTLADLNGKKVSVQVGTKSVNFLRD----NYPQVQRVEVEKNQ 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+       R DA      A Y    T        +L   ++      A+ + +++  + 
Sbjct: 168 EMFDLVGIGRADAAVTGKPAAYQFARTRPG---FRVLDKELTTEAYGIAVRKDESQLRDQ 224

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 225 MNAAL-AKIKAD 235


>gi|300715445|ref|YP_003740248.1| Cysteine transport protein [Erwinia billingiae Eb661]
 gi|299061281|emb|CAX58390.1| Cysteine transport protein [Erwinia billingiae Eb661]
          Length = 261

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 87/247 (35%), Gaps = 15/247 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++   ++        A  L DI+KRG L+  +      F  V  +   +G+D
Sbjct: 1   MKKALL-AMVGAALMLTQVTQAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE  +   F  
Sbjct: 60  IDMAKYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKVIA--FSR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +   + LSG +I V  G   ++ L D             +E   
Sbjct: 115 AYAPFFLGVFGPKDAQLKDAAALSGKTIGVTRGAVEDMVLTDVAPK---DTQLKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +AY + +          + A+   N    P    +L D     P    + + +    
Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAIARQNADKAPVAKFMLKDS----PCFIGMRKDEPALK 227

Query: 239 NIVSWTH 245
             V    
Sbjct: 228 TKVDALI 234


>gi|238750309|ref|ZP_04611811.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei
           ATCC 43380]
 gi|238711542|gb|EEQ03758.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei
           ATCC 43380]
          Length = 284

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 100/310 (32%), Gaps = 65/310 (20%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           S + +A  L DIK+ G ++  +      F  +        G+DVD   A++  +      
Sbjct: 24  SGTAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L +K++D+++ N   T  R     + F    +  GQ FI HK   +
Sbjct: 81  VELRATNPANRIPLLTAKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L          +  I P  I+K      I +G+      V+ T           
Sbjct: 194 DAKLVGLLGNLPEAQKADFEISPFSITKEYQGVGIAKGEDRLTASVNET----------- 242

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                                + ++K     +                     ++DR  G
Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261

Query: 316 NQSELKIPRG 325
             +    PRG
Sbjct: 262 PATNAAQPRG 271


>gi|237751561|ref|ZP_04582041.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879]
 gi|229372927|gb|EEO23318.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879]
          Length = 284

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 24/255 (9%)

Query: 2   YKDFFVSILCLII-----LFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFA 48
           +K  F S   L++     L   +             S +  IK  G ++ G+ +    F 
Sbjct: 5   FKGIFRSSAALVLGGAIMLGLLACGDSKQEETKKQESAIETIKNNGKIRIGVFSDKPPFG 64

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               N ++KGFDV   +  +  +  D +KI+++P+ A  R  AL++ ++DI+  N   T 
Sbjct: 65  YY-ENNEYKGFDVYIAKRFAKDLLGDENKIEFVPVEAAARASALKANKVDIIMANFTKTP 123

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            RE    + F         G +  K   I+S  QL G ++ V  GTT     AD + +  
Sbjct: 124 EREK--QVDFAKPYMKVTLGVVS-KDGAITSEEQLQGKTLIVNKGTT-----ADIYFSKQ 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
              + + FE+  E   A++  + DA + D + LYA       P   V +  I  +  +AP
Sbjct: 176 SGINLLKFEQNTETFQAFQQGKGDALSHDSTMLYAW--VKHNPDYKVGIQSIGEQDVIAP 233

Query: 229 AIIQGDTEWYNIVSW 243
           A+ QG+ E  + ++ 
Sbjct: 234 AVKQGNKELLDWLNT 248


>gi|148543614|ref|YP_001270984.1| extracellular solute-binding protein [Lactobacillus reuteri DSM
           20016]
 gi|184153022|ref|YP_001841363.1| amino acid ABC transporter substrate binding component
           [Lactobacillus reuteri JCM 1112]
 gi|227363423|ref|ZP_03847547.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3]
 gi|325681968|ref|ZP_08161486.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus reuteri MM4-1A]
 gi|148530648|gb|ABQ82647.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183224366|dbj|BAG24883.1| amino acid ABC transporter substrate binding component
           [Lactobacillus reuteri JCM 1112]
 gi|227071523|gb|EEI09822.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3]
 gi|324978612|gb|EGC15561.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus reuteri MM4-1A]
          Length = 294

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 9/229 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + +      IKKRG L  G++   V     K NG   G+DVD  RA++  +        +
Sbjct: 34  ANHTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLGLKAD---F 90

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             ++   +   L++  ID +      T  R+  +   F  +    GQ  ++ K   I + 
Sbjct: 91  QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIA--FSRVYELSGQSLVVRKNSKIKNF 148

Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             + G  + +Q  +T +     Y    K       PI+++         +A R       
Sbjct: 149 KDMKGKVLGIQESSTAQTDFDKYPQVLKRLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208

Query: 198 ISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245
                         + + ++         +A  + +GD    N +++  
Sbjct: 209 TVYAGYYATHIANNNNYKLISASAYPADRVAIGMRKGDRTLINKINYAL 257


>gi|163793471|ref|ZP_02187446.1| extracellular solute-binding protein, family 3 [alpha
           proteobacterium BAL199]
 gi|159181273|gb|EDP65788.1| extracellular solute-binding protein, family 3 [alpha
           proteobacterium BAL199]
          Length = 304

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 9/245 (3%)

Query: 6   FVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             + +    +  +S +  A      S L  +  RG L+ G  +    +      G   G 
Sbjct: 26  LGTAVVAGAVLGSSKAAQATVDSSKSKLQQVLSRGVLRVGTGSTNPPWHFEDDTGKLVGM 85

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  R ++ ++FDDP+K++++   +  R  +L + ++D++ +    T  R   +     
Sbjct: 86  DIDMARLIAKSLFDDPTKVEFVIQGSDARIPSLITDKVDVICQWMTITAGRAQQVEFT-V 144

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P         +M           L  A   V+ G    + + ++      +     F+  
Sbjct: 145 PYYREGVGLLVMADNPKYKKFDDLMMAGDSVKVGAMQNVFIEEWIHKGLPQAKVDQFDSP 204

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +    A  A R DAY GD SA+  L      P  +         +  A A+  GD  W N
Sbjct: 205 DTTLQALNAGRVDAYLGDQSAIRWLMNQF--PGRYADSGYGWLPNSYASAVRPGDPVWLN 262

Query: 240 IVSWT 244
            V+  
Sbjct: 263 WVNTV 267


>gi|330984782|gb|EGH82885.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 265

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L+++   +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSALSLMLVTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I +   L+G  + V  GT  E  L    K +        ++   
Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D  A   +          V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|153946989|ref|YP_001403107.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Yersinia pseudotuberculosis IP 31758]
 gi|152958484|gb|ABS45945.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pseudotuberculosis
           IP 31758]
          Length = 284

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 85/230 (36%), Gaps = 13/230 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           S +  A  L DIK+ G ++  +      F  +        G+DVD   A++  +      
Sbjct: 24  SGTAYADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L SK++D+++ N   T  R     + F    +  GQ FI  K   +
Sbjct: 81  VELRATNPANRIPLLASKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIARKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + L  L          +  I P  I+K      I +G+     +V+ T 
Sbjct: 194 DAKLVGLLGNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETL 243


>gi|332077039|gb|EGI87501.1| major cell-binding factor [Streptococcus pneumoniae GA17545]
          Length = 254

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S  +    + +TE  + +      
Sbjct: 176 AHRIDAFSVDHSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|238787850|ref|ZP_04631647.1| Extracellular solute-binding protein, family 3 [Yersinia
           frederiksenii ATCC 33641]
 gi|238724193|gb|EEQ15836.1| Extracellular solute-binding protein, family 3 [Yersinia
           frederiksenii ATCC 33641]
          Length = 284

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 101/310 (32%), Gaps = 65/310 (20%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77
           S + +A  L DIK+ G ++  +      F  +   +    G+DVD   A++  +      
Sbjct: 24  SGAVHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L +K++D+++ N   T  R     + F    +  GQ FI HK   +
Sbjct: 81  VELRATNPANRIPLLTAKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L          +  I P  I+K      I +G+      V+ T           
Sbjct: 194 DAKLVGLLGNLPEAQKADFEISPFSITKEYQGVGIPKGEDRLTASVNET----------- 242

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                                + ++K     +                     ++DR  G
Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261

Query: 316 NQSELKIPRG 325
             +    PRG
Sbjct: 262 PATNAAQPRG 271


>gi|312864748|ref|ZP_07724979.1| major cell-binding factor [Streptococcus downei F0415]
 gi|311099875|gb|EFQ58088.1| major cell-binding factor [Streptococcus downei F0415]
          Length = 273

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 15/235 (6%)

Query: 16  FFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSA 70
              + +   + L      IK  G LK G+   +  F    +    + G ++D  + ++  
Sbjct: 23  GLPAQAAGQAKLPAQVQKIKDAGVLKVGVKQDVPNFGYYDSKNDKYTGMEIDLAKKIADT 82

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +      +QY  + A+ R   L + Q DI+         R+ +  +      Y+D  GF+
Sbjct: 83  LGVK---VQYTAVTAQTREALLDNGQTDIMIATYTINDQRKANFSI--SNPYYYDEIGFL 137

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           ++K  GI++   L G +I V  G+ T+ +L  +   + +K+  +      E+  A RA+R
Sbjct: 138 VNKDSGINNPKDLDGKTIGVAQGSKTKASLETFASDNGIKFKYVQLGSYPELVTALRAYR 197

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA++ D S L      N++     IL           A  + +++    V+   
Sbjct: 198 VDAFSVDKSILTGYVSKNNK-----ILDQGFDTMEYGIASKKSNSQVTEYVNSLL 247


>gi|260888234|ref|ZP_05899497.1| putative cysteine ABC transporter, periplasmic cysteine-binding
           protein [Selenomonas sputigena ATCC 35185]
 gi|260862068|gb|EEX76568.1| putative cysteine ABC transporter, periplasmic cysteine-binding
           protein [Selenomonas sputigena ATCC 35185]
          Length = 285

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 79/249 (31%), Gaps = 14/249 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58
           M  K   +  + L+     + +              L+ G N     F     NG  ++G
Sbjct: 27  MKMKKMLLGAVGLLAAASFAVAGCGGSGDSGSASKTLRVGTNADFAPFEFQGENGKEYEG 86

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  RA++  +           +N      AL SK IDI          R+    + F
Sbjct: 87  FDMDLARAVAEEMG---MTADIQNINFDGLIPALVSKNIDIAISGMTINDERKK--NVLF 141

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   ++ K    I+    L+G ++ VQ GTT+   +       N         
Sbjct: 142 SEPYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQIGTTSAKEV-----KKNPDIQVKELN 196

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +     +A    A   D          +    +  ++ ++++      A+ + + E 
Sbjct: 197 SSADTFLELKAGGVQAVVNDRPVNDYYIAKSGE-KDVRVVNELLTSEDYGIAMAKDNQEL 255

Query: 238 YNIVSWTHY 246
              V     
Sbjct: 256 QKKVDEALK 264


>gi|188532628|ref|YP_001906425.1| Probable ABC transporter, periplasmic-binding protein [Erwinia
           tasmaniensis Et1/99]
 gi|188027670|emb|CAO95521.1| Probable ABC transporter, periplasmic-binding protein [Erwinia
           tasmaniensis Et1/99]
          Length = 280

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 11/227 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78
           F+ +A  L DIKK G +K         F  V A   +  G+DVDF +AL+  +      +
Sbjct: 30  FAAHADRLADIKKAGVVKVATFDANPPFGSVDAKTHEIVGYDVDFAKALAKTLGVK---L 86

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           Q +P N   R   LQS + D++  +   T  R     + F    +  GQ F++       
Sbjct: 87  QLVPTNPANRIPLLQSGKADLIVADITITPERAKV--IDFSVPYFVTGQQFLVP-VSSPD 143

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            +   + A I    GTT E  L + F     +   + +E +    +A R     A T D 
Sbjct: 144 KLDGYATARIGAVKGTTGEQELHNRFP----QSRVLSYEDIPLALSALRNGNVQAITQDS 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + L  L       +++ +LP+++SK  +   + +G+     +V+   
Sbjct: 200 TILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGEASLLKVVNDEL 246


>gi|22127993|ref|NP_671416.1| solute-binding periplasmic protein precursor for ABC transporter
           [Yersinia pestis KIM 10]
 gi|45443741|ref|NP_995280.1| putative periplasmic solute-binding protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51598241|ref|YP_072432.1| ABC transporter, periplasmic amino acid binding protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108814128|ref|YP_649895.1| periplasmic solute-binding protein [Yersinia pestis Nepal516]
 gi|145601162|ref|YP_001165238.1| periplasmic solute-binding protein [Yersinia pestis Pestoides F]
 gi|150260955|ref|ZP_01917683.1| putative periplasmic solute-binding protein [Yersinia pestis
           CA88-4125]
 gi|162421777|ref|YP_001608461.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Yersinia pestis Angola]
 gi|165926129|ref|ZP_02221961.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939968|ref|ZP_02228505.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009662|ref|ZP_02230560.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213331|ref|ZP_02239366.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167422854|ref|ZP_02314607.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425515|ref|ZP_02317268.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468126|ref|ZP_02332830.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis FV-1]
 gi|170026441|ref|YP_001722946.1| extracellular solute-binding protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186897480|ref|YP_001874592.1| extracellular solute-binding protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|218931087|ref|YP_002348962.1| putative periplasmic solute-binding protein [Yersinia pestis CO92]
 gi|229839819|ref|ZP_04459978.1| putative periplasmic solute-binding protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229841904|ref|ZP_04462060.1| putative periplasmic solute-binding protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229896781|ref|ZP_04511944.1| putative periplasmic solute-binding protein [Yersinia pestis
           Pestoides A]
 gi|229904669|ref|ZP_04519780.1| putative periplasmic solute-binding protein [Yersinia pestis
           Nepal516]
 gi|270488380|ref|ZP_06205454.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294505634|ref|YP_003569696.1| putative periplasmic solute-binding protein [Yersinia pestis
           Z176003]
 gi|21961140|gb|AAM87667.1|AE014014_1 putative solute-binding periplasmic protein precursor for ABC
           transporter [Yersinia pestis KIM 10]
 gi|45438611|gb|AAS64157.1| putative periplasmic solute-binding protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51591523|emb|CAH23195.1| ABC transporter, periplasmic amino acid binding protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777776|gb|ABG20295.1| periplasmic solute-binding protein [Yersinia pestis Nepal516]
 gi|115349698|emb|CAL22679.1| putative periplasmic solute-binding protein [Yersinia pestis CO92]
 gi|145212858|gb|ABP42265.1| periplasmic solute-binding protein [Yersinia pestis Pestoides F]
 gi|149290363|gb|EDM40440.1| putative periplasmic solute-binding protein [Yersinia pestis
           CA88-4125]
 gi|162354592|gb|ABX88540.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis Angola]
 gi|165912094|gb|EDR30734.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921989|gb|EDR39166.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991584|gb|EDR43885.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205629|gb|EDR50109.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958246|gb|EDR55267.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167055529|gb|EDR65322.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752975|gb|ACA70493.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis YPIII]
 gi|186700506|gb|ACC91135.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis PB1/+]
 gi|229678787|gb|EEO74892.1| putative periplasmic solute-binding protein [Yersinia pestis
           Nepal516]
 gi|229691243|gb|EEO83296.1| putative periplasmic solute-binding protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696185|gb|EEO86232.1| putative periplasmic solute-binding protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229700219|gb|EEO88255.1| putative periplasmic solute-binding protein [Yersinia pestis
           Pestoides A]
 gi|262363799|gb|ACY60520.1| putative periplasmic solute-binding protein [Yersinia pestis
           D106004]
 gi|262367735|gb|ACY64292.1| putative periplasmic solute-binding protein [Yersinia pestis
           D182038]
 gi|270336884|gb|EFA47661.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294356093|gb|ADE66434.1| putative periplasmic solute-binding protein [Yersinia pestis
           Z176003]
 gi|320017443|gb|ADW01015.1| putative periplasmic solute-binding protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 284

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 102/310 (32%), Gaps = 65/310 (20%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           S +  A  L DIK+ G ++  +      F  +        G+DVD   A++  +      
Sbjct: 24  SGTAYADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++    N   R   L SK++D+++ N   T  R     + F    +  GQ FI  K   +
Sbjct: 81  VELRATNPANRIPLLASKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIARKG-VL 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +   +    I    GT  E+TL +++         I ++       A R     A T D
Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L          +  I P  I+K      I +G+     +V+ T           
Sbjct: 194 DAKLVGLLGNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNET----------- 242

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                                + ++K  +               ++       ++DR  G
Sbjct: 243 --------------------LIKLEKEGD--------------AVK-------IYDRWFG 261

Query: 316 NQSELKIPRG 325
            ++    PRG
Sbjct: 262 PETNSAQPRG 271


>gi|309811005|ref|ZP_07704803.1| putative ABC transporter glutamine-binding protein GlnH
           [Dermacoccus sp. Ellin185]
 gi|308434969|gb|EFP58803.1| putative ABC transporter glutamine-binding protein GlnH
           [Dermacoccus sp. Ellin185]
          Length = 273

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 95/255 (37%), Gaps = 8/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    + +  + L  T+   +            +K GI     G      + D+KG D
Sbjct: 1   MKRAIATAGVAALALGLTACGGSDDKSSS-GSGDKIKIGIKYDQPGLGLKAGS-DYKGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +     KI ++   +K+R   L++  + ++      T  R+    ++F  
Sbjct: 59  VDVAKYVAKEMGYGEDKIDFVESPSKQREKMLEAGTVKMIFATYSITDKRK--QQVSFGG 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  GQ  +      I SV  L+G  +C   G+T+   L    K       P  +++  
Sbjct: 117 PYFVAGQSVLTKADSDIKSVKDLAGKKVCSVTGSTSVDNL----KKQQPNLVPQQYDKYS 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A  +   DA T D + L      +    +  ++ D  ++      + +GD +    
Sbjct: 173 ECADALASGAIDAMTTDNTILAGYANQDAYKGKFKLVGDAFTEEKYGVGLKKGDKDTCEK 232

Query: 241 VSWTHYAMVTAEELG 255
           V+     MV + E  
Sbjct: 233 VNKAITKMVDSGEWK 247


>gi|290891212|ref|ZP_06554274.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429]
 gi|290479176|gb|EFD87838.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429]
          Length = 287

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
                ++   ++  ++ + N S        +K+ G ++ G+      F  +    G  +G
Sbjct: 15  IILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTGQPEG 74

Query: 59  FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           FDVD  +AL+  +      P +  +  + +  R   L++  ID        T  RE    
Sbjct: 75  FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKV-- 132

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K  GI S+  L+ +   +     +   +    K    K   + 
Sbjct: 133 IDFSNSYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVI--NVKKFAPKAKVLA 190

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                +  AA +A +  A T D   LY L    + P  + ++    +  P   A      
Sbjct: 191 LGDYGQAMAALKAGQGQALTTDNGILYGLAT--ENPG-YTVVGGTFTSEPYGVAFDNNQP 247

Query: 236 EWYNIVSWTHYAMVT 250
           E     +    A++ 
Sbjct: 248 EMVKQTNKALKAIIA 262


>gi|171317513|ref|ZP_02906703.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171097342|gb|EDT42187.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 264

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +        ++          LQ+ + D++S     T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVISNQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTREFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHYAMVTAE 252
           ++   +     A + A+
Sbjct: 229 KFQKAIDDAM-AQLEAD 244


>gi|296392570|ref|YP_003657454.1| family 3 extracellular solute-binding protein [Segniliparus
           rotundus DSM 44985]
 gi|296179717|gb|ADG96623.1| extracellular solute-binding protein family 3 [Segniliparus
           rotundus DSM 44985]
          Length = 335

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 12/227 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +   L  I +RG L  G++ G   F+    A G  KGFDV   R ++  +  DP+++ Y 
Sbjct: 78  HGGRLDRILQRGKLVVGLDQGTYPFSYRDSATGQMKGFDVAMAREIAQGMLGDPNRVDYR 137

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            +++  R  AL++  +DI+ +       R     + F    +   Q  +       ++++
Sbjct: 138 IISSAGRTTALENDSVDIVIKTMSINCKR--MKEITFSEPYFETDQRVMAATNANATTLA 195

Query: 142 Q---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L  +++C   G+T        F         +      +   A +    DA + D 
Sbjct: 196 DRKILGESTVCAARGSTAVGHFHHLFPTAK----ILGTTTWADCLVAIQQGSVDAISSDE 251

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           S LY     +        L   + +      + +G+ E   +V+   
Sbjct: 252 SILYGFYDQDPNLYFLSALQ--LGREVYGVGMHKGEAELERVVNKII 296


>gi|116491605|ref|YP_811149.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni
           PSU-1]
 gi|116092330|gb|ABJ57484.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Oenococcus oeni PSU-1]
          Length = 287

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
                ++   ++  ++ + N S        +K+ G ++ G+      F  +    G  +G
Sbjct: 15  IILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTGQPEG 74

Query: 59  FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           FDVD  +AL+  +      P +  +  + +  R   L++  ID        T  RE    
Sbjct: 75  FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKV-- 132

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  GQ  ++ K  GI S+  L+ +   +     +   +    K    K   + 
Sbjct: 133 IDFSNSYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVI--NVKKFAPKAKVLA 190

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                +  AA +A +  A T D   LY L    + P  + ++    +  P   A      
Sbjct: 191 LGDYGQAMAALKAGQGQALTTDNGILYGLAT--ENPG-YTVVGGTFTSEPYGVAFDNNQP 247

Query: 236 EWYNIVSWTHYAMVT 250
           E     +    A++ 
Sbjct: 248 EMVKQTNKALKAIIA 262


>gi|322373400|ref|ZP_08047936.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C150]
 gi|321278442|gb|EFX55511.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C150]
          Length = 266

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K F  ++  L  +   +  +       IK+   L   ++     F     +       
Sbjct: 3   MKKLFLGAMALLATVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLIDGKDQVV 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+   +A++  +      ++   ++      +LQ+ + DI       T  R+ +    
Sbjct: 63  GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQAGKADIAISGISVTAERKKT--FD 117

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K +    SS+    G  + VQ GT  E       K        + 
Sbjct: 118 FSDPYYETQNAIIVRKDQAADYSSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              + E     ++ + DA   +          N   +   +   +      A A+ +G+ 
Sbjct: 174 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLTLASVALKVNDGDAKAVAMTKGND 233

Query: 236 EWYNIVSWTHY 246
           +    V+    
Sbjct: 234 KLKKAVNKVIK 244


>gi|296269107|ref|YP_003651739.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
 gi|296091894|gb|ADG87846.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
          Length = 289

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 6/242 (2%)

Query: 6   FVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            V++  L         + A  +    K    L  GI     G    K +G + GFDVD  
Sbjct: 19  LVTLAALATSLTACGQSKADSIVDKAKNEKKLTIGIKIDQPGLGLRKPDGTYAGFDVDVA 78

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R ++  +    S I +    +  R   +Q  Q+D++      T  R+    ++F      
Sbjct: 79  RYIAKELGVPESGITFKEAQSANREPFIQQGQVDMVIATYSITDERKE--KVSFAGPYLV 136

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            GQ  ++      I+ V  L    +C   G+ +   LAD F       +    +      
Sbjct: 137 TGQDILIRADDDSITDVQSLKDKKVCGAQGSISPKRLADMFGPEWEAKNLTQQQGYGACL 196

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 + DA + D + L         P +  ++    S       + + D    + ++ 
Sbjct: 197 PLLENKQVDAISTDATILAGFAAQF--PGKFKLVGKPFSTEKYGIGLKKDDKAGRDAINN 254

Query: 244 TH 245
             
Sbjct: 255 AL 256


>gi|116493032|ref|YP_804767.1| amino acid ABC transporter periplasmic protein [Pediococcus
           pentosaceus ATCC 25745]
 gi|116103182|gb|ABJ68325.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 273

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 94/269 (34%), Gaps = 19/269 (7%)

Query: 1   MYKDFFVSILCLIILF----FTSFS-------TNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K+  + ++  + L                    S    I+K   +  G++   V    
Sbjct: 1   MKKELKLFLVMALGLLIIPVLGGCGNSKKTTRAEPSSWETIQKNKKVVIGLDDSFVPMGF 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            + NG   G+D+D  RA+         K+ +  ++       L+++ ID++      T  
Sbjct: 61  REKNGQLAGYDIDLARAVFRQYG---IKVDFQTIDWSMNVTELRNQTIDLIWNGLTITDE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKA 166
           R+    L        + Q  ++ K  GI+ ++ L   S+  Q+G++    + D+    K 
Sbjct: 118 RQK--ALTLSEPYLTNQQIIVVKKSSGITKLADLKNKSVGAQSGSSGAQDIDDHPQILKN 175

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
               + PI+++          A+R      D              S++ I+   +     
Sbjct: 176 RIKNHDPILYDSFNNAFIDLNANRIQGLLIDSVYANYYIKHMSNSSDYRIIKSNMPSEQF 235

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           A  I +G+TE    +      +    EL 
Sbjct: 236 AVGIKKGNTEVKQKIDQGINQLRADGELK 264


>gi|227820383|ref|YP_002824354.1| glutamine ABC transporter periplasmic protein [Sinorhizobium fredii
           NGR234]
 gi|227339382|gb|ACP23601.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 261

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 10/253 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  FV++  +           A  LGDI  RG ++  +      F  V  +    G+D+D
Sbjct: 4   RRLFVAMTAMAAAIGFGSIAQADALGDITARGTIRVAVPQDFPPFGSVGPDMAPVGYDID 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      ++ +P+ +  R   LQ+ ++D++  +      RE    + F    
Sbjct: 64  MANLIAEKLGVK---VELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKV--IDFTAAY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G         +   +L+G +I V  G   +L L     A         +E     
Sbjct: 119 APFYNGVFAPADFVAAKPEELAGKTIGVTRGAVEDLELTKIAPA---DTVIKRYEDNNGT 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A+ + + +A         A+      P +   L  +I  SP    + +        V+
Sbjct: 176 ISAFLSGQVEAVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLSKEQPALLEKVN 233

Query: 243 WTHYAMVTAEELG 255
               A  T   L 
Sbjct: 234 GIIAAAKTDGSLN 246


>gi|227545108|ref|ZP_03975157.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri CF48-3A]
 gi|300909220|ref|ZP_07126681.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
 gi|68160911|gb|AAY86901.1| lr1730 [Lactobacillus reuteri]
 gi|227184896|gb|EEI64967.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri CF48-3A]
 gi|300893085|gb|EFK86444.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
          Length = 294

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 9/229 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +        IKKRG L  G++   V     K NG   G+DVD  RA++  +        +
Sbjct: 34  ANYTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLGLKAD---F 90

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             ++   +   L++  ID +      T  R+  +   F  +    GQ  ++ K   I + 
Sbjct: 91  QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIA--FSRVYELSGQSLVVRKDSKIKNF 148

Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + + G ++ +Q  +T +     Y    K       PI+++         +A R       
Sbjct: 149 ADMKGKTLGIQESSTAQTDFDKYPQVLKKLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208

Query: 198 ISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245
                         + + ++         +A  + +GD    N +++  
Sbjct: 209 TVYAGYYATHIANNNNYKLISASAYPADRVAIGMRKGDRTLINKINYAL 257


>gi|110800274|ref|YP_695974.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens ATCC 13124]
 gi|110674921|gb|ABG83908.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens ATCC 13124]
          Length = 262

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 9/245 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ I   +IL       ++  +   K    +  GI+   V        GD  GFD
Sbjct: 1   MKKLLFLLISI-VILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +     +     K+ + P++   +   L +  ID++      T  RE    +AF  
Sbjct: 60  VDLSKEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTHEREK--KVAFTN 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFER 178
               + Q  +      I++++ L G ++  Q G+++  TL +  K         P++F+ 
Sbjct: 115 SYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFERPKLTKSFKNGEPVLFDS 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +      A R DA   D   L    +  + PS+  +L + + +   +  + +      
Sbjct: 175 FNDCFMDLEAGRSDAVVCDE-ILAQYYIFKNDPSKFHVLTEDLGEESYSIGLRKNSNLID 233

Query: 239 NIVSW 243
           ++   
Sbjct: 234 HLNKT 238


>gi|325964012|ref|YP_004241918.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470099|gb|ADX73784.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 296

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 11/258 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              + +  +   G +K G       F +V  +G   GFDV+  + +++ +     KI++ 
Sbjct: 47  AAGTTMEKLSSAGSIKIGTKFDQPLFGQVGLDGKPVGFDVEIGKLIAAELGIPADKIEWS 106

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140
              +  R   ++  ++D++         R     + F    Y  GQ  +++K    I   
Sbjct: 107 ETVSANREPFIEQGKVDLVIATYTINDKR--KQVVDFAGPYYEAGQALMVNKDNDTIKKP 164

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  +C   G+T   T+ D + A       +            R  + +A T D   
Sbjct: 165 EDVKGKKVCSVTGSTPAATIVDKYGA-----ELVPAATYSACLEPLRNKQVEAVTTDNVI 219

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE--ELGITQ 258
           L             +   +  +K P    + +GDTE+ N ++            E     
Sbjct: 220 LAGFVDKEPDA-FKLASDETFTKEPYGIGLKKGDTEFRNWINDQLEKFEENGSYEKAWEA 278

Query: 259 KNINQVSKDTTNPDVQRF 276
              + +      P++ R+
Sbjct: 279 TAGSVIKTAPKLPEIDRY 296


>gi|152965465|ref|YP_001361249.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
 gi|151359982|gb|ABS02985.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
          Length = 305

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 89/231 (38%), Gaps = 10/231 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           T +     IK  G +  G+     G  +  A +G++ GFD++  + +++ +   P +I +
Sbjct: 56  TGSPTYDKIKAAGKVVIGVKADQPGIGQKDAGSGEYTGFDIEMAKLMAANLGLTPDEIDF 115

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139
           +   +  R   LQ   +D++  +      R+    + F    Y  GQ  ++    + I+ 
Sbjct: 116 VETVSANREPFLQQGTVDMVIASYTINDKRK--QVVDFAGPYYVAGQDLLVRADEEEITG 173

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G  +C   G+T    + D           + F+   +      ++  DA T D +
Sbjct: 174 PDALAGKKVCSVEGSTPATRIRDEHP----DAQLVTFDAYSKCVEQLTSNAVDAVTTDDA 229

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            L        +P    ++    S+ P    + +GDT   N ++      V 
Sbjct: 230 ILRGYAAQ--QPEALKVVGAPFSEEPYGIGLPKGDTALRNALNDAIETAVE 278


>gi|254302678|ref|ZP_04970036.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148322870|gb|EDK88120.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 292

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 29/260 (11%)

Query: 2   YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43
            K   ++ + + +    +                      A  + +IK  G ++ G+ T 
Sbjct: 5   KKILKLATVGVAVFALAACGNKTEETKPEAQAPAQETTAKARTVQEIKDSGVIRIGVFTD 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  +  NG  +G+DV F   L+  +      ++Y+ L+   R    ++ + DI++ N
Sbjct: 65  KAPFGYIDENGKNQGYDVYFTDRLAKDLGVK---VEYISLDPASRVEYAETAKADIVAAN 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +   K  I S+ +L   ++ V  GTT E      
Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDKAVIKSIDELKDKTLIVSKGTTAEYY---- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F  ++ +     ++   +   A    R DA++ D + + A       P   V +  +   
Sbjct: 176 FSKNHPEIKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KANPGFTVGIDSLGDV 233

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +A A+ +G+ +  + ++ 
Sbjct: 234 DTIAVAVQKGNKDLLDWINN 253


>gi|18310306|ref|NP_562240.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|18144986|dbj|BAB81030.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
          Length = 262

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 9/237 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ I   +IL       ++  +   K    +  GI+   V        GD  GFD
Sbjct: 1   MKKLLFLLISI-VILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +     +     K+ + P++   +   L +  ID++      T  RE    +AF  
Sbjct: 60  VDLAKEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTHEREK--KVAFTN 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178
               + Q  +      I++++ L G ++  Q G+++  TL +            P++F+ 
Sbjct: 115 SYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDS 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +      A R DA   D          N  PS+  +L + + +   +  + +   
Sbjct: 175 FNDCFMDLEAGRSDAVVCDEILAQYYIFKNG-PSKFHVLTEDLGEESYSIGLRKNSN 230


>gi|330430186|gb|AEC21520.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pusillimonas sp. T7-7]
          Length = 270

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 78/256 (30%), Gaps = 19/256 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDF 63
               +  +     +  +  A ++  +K+RG L  G+      F  V    G+  GFD+D 
Sbjct: 11  LVAGVTAVSAFTASGIAHAADLIDTVKERGTLIVGVEGTYPPFNYVDTKTGELDGFDIDV 70

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + ++  +      +Q++          L S + D++      T  R       F     
Sbjct: 71  AKLIADKLGVK---VQFVKTEWSAILAGLTSGKFDVIVNQVGITPGR--QQTFDFSVPYV 125

Query: 124 FDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 I+ K      +S + L G  + V  G+  E                  +    E
Sbjct: 126 ASSPQLILRKNDDAGYTSFADLKGKKLGVSQGSNYEA-----LAKSQEGVDVKSYPGAPE 180

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWYN 239
             +   + R DA   D      L  T++ P +       I   P        +G+  +  
Sbjct: 181 YLSDLISKRVDAALNDQLMTAYLVKTSNIPIK----GGAIVGEPKFNGIPFRKGNPGFEA 236

Query: 240 IVSWTHYAMVTAEELG 255
            ++        + E  
Sbjct: 237 ALNKALQDSFDSGEFA 252


>gi|194290845|ref|YP_002006752.1| extracellular solute-binding protein, ABC transporter periplasmic
           protein [Cupriavidus taiwanensis LMG 19424]
 gi|193224680|emb|CAQ70691.1| Putative extracellular solute-binding protein, ABC transporter,
           periplasmic component [Cupriavidus taiwanensis LMG
           19424]
          Length = 263

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---LKCGINTGLVGFAEVKANGDWK 57
           M K F   +L   +  F +     S             +  G++          AN +  
Sbjct: 1   MKK-FAALLLISSVALFAACGKKESAPAPAAGTDTATRIVVGLDDNFPPMGFRDANNELV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +  S  +      +++ P++   +   L  K++D+L      T  R+    ++
Sbjct: 60  GFDIDMAKEASRRLG---MTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NIS 114

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F      + Q  I+  +  + + + L+G  +  Q G++    +    +          F 
Sbjct: 115 FTAPYMTNHQIVIVGTQSPVKAKADLAGRIVGAQDGSSAVDAIKKESQIAASLKELKTFG 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R DA   D   +    L + R  E+ +L +          + + D E 
Sbjct: 175 DNVTALMDLSAGRLDAIVVDE--VVGRYLISKRAGEYRVLEENFGTEDYGVGVRKDDAEL 232

Query: 238 YNIVSWTHYAMVT 250
              +  T  +M  
Sbjct: 233 LGKLDKTLASMKQ 245


>gi|15900517|ref|NP_345121.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae TIGR4]
 gi|111656914|ref|ZP_01407738.1| hypothetical protein SpneT_02001841 [Streptococcus pneumoniae
           TIGR4]
 gi|149002289|ref|ZP_01827231.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS69]
 gi|149021569|ref|ZP_01835624.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|168490505|ref|ZP_02714648.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC0288-04]
 gi|14972084|gb|AAK74761.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae TIGR4]
 gi|147759604|gb|EDK66595.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS69]
 gi|147930265|gb|EDK81250.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|183574881|gb|EDT95409.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC0288-04]
          Length = 254

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR D ++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDTFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|241630654|ref|XP_002408387.1| cystine-binding periplasmic protein, putative [Ixodes scapularis]
 gi|215501179|gb|EEC10673.1| cystine-binding periplasmic protein, putative [Ixodes scapularis]
          Length = 249

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 84/236 (35%), Gaps = 11/236 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS 69
             + L   +    A  L DIKK G LK         F  V        G DVDF +AL+ 
Sbjct: 1   ATLTLALVAGVAQADRLDDIKKTGVLKVASFDSNPPFGFVDQKSRQITGLDVDFAQALAD 60

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +      +     N   R   L S ++D++  N   T  R     + F    +  GQ F
Sbjct: 61  KLGVKLEVLP---TNPANRVPLLTSNKVDLVLANFTITEERAK--QVDFSIPYFASGQQF 115

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +  K   +SS  QL+   I V  GT  E+ L + +         + ++       A R  
Sbjct: 116 LAKKG-VLSSPEQLNSLRIGVDKGTVNEIVLREKYPQAK----LVAYDDTPFAFTALRNG 170

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              A T D   L  L         + I    IS+  +   I +G+T   + V  T 
Sbjct: 171 NVQAITQDGPKLIGLLANVPDKENYEIPAFSISEDLIGIGIPKGETALKSFVDETL 226


>gi|222148131|ref|YP_002549088.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735119|gb|ACM36082.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 260

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 10/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   +++   +  F      +A  LGDI KRG LK  +      F  V  +    G+D
Sbjct: 1   MHRRTLLALGLSLATFAAVLPAHADALGDITKRGTLKVAVPQDFPPFGSVGTDMQPVGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +      ++ +P+ +  R   LQ+ ++D++  +      RE    + F  
Sbjct: 61  IDTAALIAKKLGVK---LELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKV--VDFST 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G        I S + LSG S+ V  G   +L L     +         +E   
Sbjct: 116 AYAPFYNGVFAPADTAIKSAADLSGKSVGVTRGAVEDLELTKVAPS---DAVIKRYEDNN 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +A+ + + DA         A+      P +      +I  SP      + +      
Sbjct: 173 GTISAFLSGQVDAVATGNVVAAAILA--KNPPKRPEPKFLIKNSPCFIGFNKNEPALAEK 230

Query: 241 VSWTH 245
           ++   
Sbjct: 231 INAII 235


>gi|158424904|ref|YP_001526196.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158331793|dbj|BAF89278.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 267

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 78/231 (33%), Gaps = 11/231 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   +    A  L +IKKRG +   ++ G   F    AN    G DV+  + +++ +   
Sbjct: 21  MGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANMQPTGSDVESAKLIAADLG-- 78

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++ + + +  R   L + + D++  +   T  R+    + F              K 
Sbjct: 79  -FPLEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKV--IDFSDPYGVIQIVVAAPKS 135

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +  +  L G  +    G++ +                + ++    +  A  + + +  
Sbjct: 136 VAVKDLKDLVGKRLGTTRGSSNDKEATTQA----QGAEMVRYDDDATLITALVSGQVNIM 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 + A+          + L  ++  +P A  + +GD      V+   
Sbjct: 192 ASSPQVMAAVNARRPNDPLEIKL--VLKTNPYAAGLRKGDDALREAVNKVI 240


>gi|15888714|ref|NP_354395.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156456|gb|AAK87180.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 261

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 87/246 (35%), Gaps = 11/246 (4%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+ +   ++I  + +    S +  A  LGDI  RG ++  +      F  V  +   +G+
Sbjct: 1   MFSRRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    +   +      ++ +P+ +  R   LQ+ ++D++  +      RE    + F 
Sbjct: 61  DIDVANLIGEKLGVK---VELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G        ++    LSG +I V  G   +L L     A         +E  
Sbjct: 116 TAYAPFFNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPA---DTTIKRYEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               +A+ A + +A         A+      P +   L  +I  SP    + +       
Sbjct: 173 NGTISAFLAGQVEAVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQPALLE 230

Query: 240 IVSWTH 245
            V+   
Sbjct: 231 KVNAII 236


>gi|310819142|ref|YP_003951500.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392214|gb|ADO69673.1| Glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 469

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 86/243 (35%), Gaps = 10/243 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           ++L   +    A  L  I+  G L+  I+        +  NG   GFDVD  R L+  + 
Sbjct: 1   MLLPVLAEPAPAGELERIRTAGVLRVAIDATYPPMEFL-ENGQPVGFDVDLSRELARRLG 59

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                 Q++ ++       L S + DI+  + + T  R     + F        Q F+  
Sbjct: 60  VTA---QFIVMDWDGILAGLTSGRYDIIVSSMNITPER--LQQVDFI-EYARLSQVFVTT 113

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           + + I +  +L+G  + VQ  TT++  +    +          F    E  +A +A + D
Sbjct: 114 RGQSIRTEQELAGHRVAVQTNTTSQRWVERLQQRGVHVREIRPFPGATECFSAVKAGQAD 173

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               D            R    V+    +   P+  AI +   +    ++     +  + 
Sbjct: 174 VIVIDEPVGLFF---ARRDDAFVMTGKALDAEPIGIAIDKKAPDLTAALTRALQDIRDSG 230

Query: 253 ELG 255
           E  
Sbjct: 231 EQK 233


>gi|219683680|ref|YP_002470063.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|219621330|gb|ACL29487.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis AD011]
          Length = 271

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 100/256 (39%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +     LF  +   ++S  G+      ++ GI     G      +G ++GFD
Sbjct: 1   MARKAIAMVCAASALFGMAACGSSSADGE----KKIRIGIKYDQPGLGFK-KSGTFEGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R +++ +    ++I++L   +K+R   LQ+  +D++      T  R+    ++F  
Sbjct: 56  VDVARYVANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATYSITDERKK--AVSFAG 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  GQ  ++      I+    L+G  +C   G+T+   + + F     +   +     
Sbjct: 114 PYFVAGQDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAK---EVQLMEQPGY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +   DA T D   L  L   +       ++    ++      I +GDT +  
Sbjct: 171 AECATALFSGIVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIRKGDTAFAK 228

Query: 240 IVSWTHYAMVTAEELG 255
            ++     M+ + E  
Sbjct: 229 QINAAIEDMIKSGEWE 244


>gi|66043627|ref|YP_233468.1| cystine transporter subunit [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254334|gb|AAY35430.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 265

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  +G   GF+
Sbjct: 7   RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I SV  LSG  + V  GT  E    ++ KA+        ++   
Sbjct: 124 TISGIQALVLKKNADTIKSVKDLSGKKVGVGLGTNYE----EWLKANVPDAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D   L AL++     ++ V   +  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGEAFSRQASGIALRKGEPELLAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|325978782|ref|YP_004288498.1| putative glutamine transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178710|emb|CBZ48754.1| putative glutamine transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 270

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 19/279 (6%)

Query: 1   MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K           + +L L     T   + +  +  I+  G LK G+   +  F    A
Sbjct: 1   MKKKLGLAILASLSLILLTLFAGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 60

Query: 53  -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G ++G +VD  + ++  +      + +  + A+ R   L + QIDIL      T  R+
Sbjct: 61  ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTAQTREALLDNGQIDILIATYTITEERQ 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF+++K KG  S++ L G +I V  G+TT+  + +Y +AHN+ +
Sbjct: 118 ASYAI--SDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +      E+  +  A+R  A++ D S L              I+ +  +      A  
Sbjct: 176 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 230

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           + +    + ++       T   L       +       +
Sbjct: 231 KSNQSVIDYINDLLADWKTDGSLQKLYDKYDLTPATADD 269


>gi|67643524|ref|ZP_00442269.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           GB8 horse 4]
 gi|166998513|ref|ZP_02264371.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           PRL-20]
 gi|167847286|ref|ZP_02472794.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei B7210]
 gi|254178914|ref|ZP_04885568.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein, truncation
           [Burkholderia mallei ATCC 10399]
 gi|254202701|ref|ZP_04909064.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           FMH]
 gi|254208041|ref|ZP_04914391.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           JHU]
 gi|147746948|gb|EDK54025.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           FMH]
 gi|147751935|gb|EDK59002.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           JHU]
 gi|160694828|gb|EDP84836.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein, truncation
           [Burkholderia mallei ATCC 10399]
 gi|238524887|gb|EEP88317.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           GB8 horse 4]
 gi|243065198|gb|EES47384.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia mallei
           PRL-20]
          Length = 262

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 6/222 (2%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLA 91
           +  G     + F+    N    G+  DF   +  A+         +++ +P+ ++ R   
Sbjct: 2   IALGHRESSIPFSYYDQNQQVVGYSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPL 61

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +Q+  +DI   +T   L R+      F    +  G   +  K  GI   + L G ++   
Sbjct: 62  VQNGTVDIECGSTTNNLDRQKQAA--FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTT 119

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           AGTT+E  L +    + M    I  +   E        R  A+  D + L   +    +P
Sbjct: 120 AGTTSERLLREMNNKNQMGMSIISAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQP 179

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            E VI+    S+      + + D  +  +V      +  + E
Sbjct: 180 GEWVIVGKPQSQEAYGCMMRKDDPAFKKVVDDAIVQVEKSGE 221


>gi|300870609|ref|YP_003785480.1| polar amino acid uptake ABC transporter amino acid-binding protein
           [Brachyspira pilosicoli 95/1000]
 gi|300688308|gb|ADK30979.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Brachyspira pilosicoli 95/1000]
          Length = 268

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 86/255 (33%), Gaps = 15/255 (5%)

Query: 1   MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +   +  + +  +  +      + +   + L  +K++G L  G++            G
Sbjct: 1   MKRILILFSMIIFAISCSKTETQNTQAGADNSLQKVKEKGKLVLGLDDTFAPMGFRDEAG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFD+D  + +++ +      ++  P++     L+L    +D+L         R    
Sbjct: 61  NVVGFDIDLAQEVANRLGVK---LEVKPIDWASGILSLNKGDVDMLWNGFTINETR--KQ 115

Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F      +    +    +K I+S   L G  + VQ G+  E   AD           
Sbjct: 116 QINFSKPYLNNRLIIVKSSDRKDINSKEDLKGKVLGVQVGSNQEALEADPISK--EAKEV 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             ++         +A R D    D  A     +  +  +  V+    +++        + 
Sbjct: 174 RPYDVNVNAFLDLQAKRIDVVVIDEVA-ARYYIAEENVNFEVVENSPLTEELYGIGFRKN 232

Query: 234 DTEWYNIVSWTHYAM 248
           D E  N V      M
Sbjct: 233 DVELLNAVDKALDDM 247


>gi|210630037|ref|ZP_03296222.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279]
 gi|210160714|gb|EEA91685.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279]
          Length = 306

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 87/284 (30%), Gaps = 23/284 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILG--------------DIKKRGFLKCGINTGLVGFAEVK 51
             S    + LF       A+                      G L  G +     +  V 
Sbjct: 31  VASAAMALTLFVGCGGAPAATNEGSAAGSAAATSKDTSAVATGKLIVGFDQSYPPYGYVG 90

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G++ GFD+D  RA++     +   ++   ++   +   L+S  I+ +          +
Sbjct: 91  DDGEYTGFDLDLARAVAEEQGWE---LELEAIDWDAKDAMLKSGAINCIWNGFTMDNRED 147

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMK 170
                 F      + Q  ++    GI     L+G ++  Q  +  E  L +         
Sbjct: 148 ---DYTFSDPYMLNAQVVVVRADSGIEDAEGLAGKTVVTQVDSAAEAVLKEDAADLAATF 204

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                            +   DA   D+S   A+     +P  +V+L D +S+   A   
Sbjct: 205 ASLETIGDYNTAFMQLESGAVDAVACDLSI--AMYQMTAKPDAYVMLDDYLSEENYAVGF 262

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            +GDT     V+ T  A+     +               N  ++
Sbjct: 263 KKGDTATAKKVTETLKALYEDGTVDEIAAKYADQGLTMDNWQIK 306


>gi|330838427|ref|YP_004413007.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas
           sputigena ATCC 35185]
 gi|329746191|gb|AEB99547.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas
           sputigena ATCC 35185]
          Length = 259

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 79/249 (31%), Gaps = 14/249 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58
           M  K   +  + L+     + +              L+ G N     F     NG  ++G
Sbjct: 1   MKMKKMLLGAVGLLAAASFAVAGCGGSGDSGSASKTLRVGTNADFAPFEFQGENGKEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  RA++  +           +N      AL SK IDI          R+    + F
Sbjct: 61  FDMDLARAVAEEMG---MTADIQNINFDGLIPALVSKNIDIAISGMTINDERKK--NVLF 115

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   ++ K    I+    L+G ++ VQ GTT+   +       N         
Sbjct: 116 SEPYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQIGTTSAKEV-----KKNPDIQVKELN 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +     +A    A   D          +    +  ++ ++++      A+ + + E 
Sbjct: 171 SSADTFLELKAGGVQAVVNDRPVNDYYIAKSGE-KDVRVVNELLTSEDYGIAMAKDNQEL 229

Query: 238 YNIVSWTHY 246
              V     
Sbjct: 230 QKKVDEALK 238


>gi|329939958|ref|ZP_08289240.1| glutamate uptake system binding subunit [Streptomyces
           griseoaurantiacus M045]
 gi|329300784|gb|EGG44680.1| glutamate uptake system binding subunit [Streptomyces
           griseoaurantiacus M045]
          Length = 279

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 79/224 (35%), Gaps = 7/224 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K GI     G      +G + GFDVD  + ++  +  D   I +    + +R  ALQ  
Sbjct: 40  IKVGIKFDQPGLGLKTPDGSYTGFDVDVAKYVAKELGYDEKNIDFKETPSADRENALQRG 99

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
            +D +  +   T  R+    + F        Q  ++     I+  + L+G  +C   G+T
Sbjct: 100 DVDYIVASYSITDERKA--KVDFAGPYLLAHQDLLIRADDKIAKGADLNGKKLCSVTGST 157

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   +         K     +    E      +   DA T D S L      +    +  
Sbjct: 158 SAQNVKKTIA---PKAQLREYGTYSECMDGLTSGAVDALTTDDSILAGYASQDQYKGKVK 214

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH--YAMVTAEELGIT 257
           +    +S       + +GDT+  + ++      A   A E  + 
Sbjct: 215 LAGLKLSNENYGIGVKKGDTKMTDKINKALEKMASDGAWEKAVK 258


>gi|309802692|ref|ZP_07696796.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
 gi|308220756|gb|EFO77064.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
          Length = 301

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  L +IKK G LK  + +    F  V  +G++ G+DV F   L+  +        Y  +
Sbjct: 53  ARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSV 109

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +   R   L S ++D+   N   T  R+    + F         G +  +   I+ VSQL
Sbjct: 110 DPAARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQL 167

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V  GTT E      F+ +        +++  +   A    R DA++ D + + A
Sbjct: 168 KGKTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 223

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                      V +  +  +  +APA+ +G+ E  + ++ 
Sbjct: 224 WA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 261


>gi|261379030|ref|ZP_05983603.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria cinerea ATCC 14685]
 gi|269144568|gb|EEZ70986.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria cinerea ATCC 14685]
          Length = 268

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 89/258 (34%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    +I C  +        +          G + +   N     F  + + GD +GF
Sbjct: 3   MKKWIAAAIACSALTLSACGGQSKDAASPAANTGKVYRVASNAEFAPFESLDSKGDVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++        KI++        F AL +   D++      T   +    + F 
Sbjct: 63  DVDLMNAMAKE---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K ISS   L     + V  G T + +++    + N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVSKLLGSDN--PKIARFEN 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +GD E 
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPD-FTTEHYGIAVRKGDGET 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 LKVMNDALKKVRESGEYD 252


>gi|161507579|ref|YP_001577533.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           helveticus DPC 4571]
 gi|260101514|ref|ZP_05751751.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus helveticus DSM 20075]
 gi|300812411|ref|ZP_07092841.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|160348568|gb|ABX27242.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           helveticus DPC 4571]
 gi|260084657|gb|EEW68777.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus helveticus DSM 20075]
 gi|300496578|gb|EFK31670.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|323466463|gb|ADX70150.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus
           helveticus H10]
 gi|328466385|gb|EGF37537.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 286

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%)

Query: 1   MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M K       + I+ LI++   +            T  S         +IK+RG+++  +
Sbjct: 1   MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V   G   G+DV   R ++  +     KI+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNDQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S  +L G  + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                A     + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
             +  +APA+ +G+       +
Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250


>gi|148992284|ref|ZP_01822007.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|168488293|ref|ZP_02712492.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP195]
 gi|237649852|ref|ZP_04524104.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CCRI 1974]
 gi|237821285|ref|ZP_04597130.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|147928910|gb|EDK79922.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|183573167|gb|EDT93695.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP195]
 gi|332074415|gb|EGI84891.1| major cell-binding factor [Streptococcus pneumoniae GA17570]
          Length = 254

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR D ++ D S L              +L D    S       + +TE  + +      
Sbjct: 176 AHRIDTFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDTLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|116617275|ref|YP_817646.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096122|gb|ABJ61273.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 281

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 11/225 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +   + +IKK G +K  +   L  +  V  NG  +G+D++  + ++  +      ++Y+
Sbjct: 35  QSGRTVKEIKKSGEIKIAVFGDLKPYGWVDKNGKRQGYDIELAKKVAKDLGVK---VKYV 91

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            +NA  R  AL S ++D+   N   T  R+    + F         G    K K I+ V 
Sbjct: 92  QVNANARVDALNSGKVDLALANFTVTPERKKV--IDFAKPYMKVSIGVASKKSKLITKVD 149

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL G  + V  GTT E      F  +  K   + F+   +  AA +  R DA T D S L
Sbjct: 150 QLHGKKLIVNKGTTAETY----FTKNYTKASLLKFDSKTQQFAALKDGRADAITDDNSYL 205

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +A       P   V +  +  +S ++P + +G+            
Sbjct: 206 FAW--VKSHPDYKVGIKKLGEQSYISPGVQKGNKSLLKWTDKEIN 248


>gi|94309646|ref|YP_582856.1| extracellular solute-binding protein [Cupriavidus metallidurans
           CH34]
 gi|93353498|gb|ABF07587.1| glutamate and aspartate transporter subunit ; periplasmic-binding
           component of ABC superfamily [Cupriavidus metallidurans
           CH34]
          Length = 302

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 8/234 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KI 78
           +   L  IK  G +  G     + F+      +  G+  D+  A+   +    + P+ ++
Sbjct: 31  DGDTLKKIKDSGVISLGYRESSIPFSYSDGK-EVMGYSHDYLLAIVDKVKSTLNMPNLQV 89

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +  P+ ++ R   +Q+  IDI   +T   L R+  +   F    +  G   +  K  G++
Sbjct: 90  KLTPITSQNRIPLMQNGTIDIECGSTTNNLERQKQVA--FSNSLFIYGIRMLTKKDSGVT 147

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
              QL   ++   AGTT E  L        M  +    +   +      + R  A+  D 
Sbjct: 148 DFPQLKDKNVVTTAGTTGERLLVKMNGE-GMNMNLTSAKDHGQAFLILESGRAAAFVMDE 206

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             LY  +      +E V+    +     A    + D  +  +V      ++T+ 
Sbjct: 207 PLLYGERTKAKNAAEWVVAGKPLQTENYACMFRKDDPSFKKLVDGVVADIMTSG 260


>gi|302545376|ref|ZP_07297718.1| amino acid ABC transporter, amino acid-binding protein
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302462994|gb|EFL26087.1| amino acid ABC transporter, amino acid-binding protein
           [Streptomyces himastatinicus ATCC 53653]
          Length = 348

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 84/242 (34%), Gaps = 16/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66
                 S +   +  IK+R       G L  G++     +       G+  GFD+D  RA
Sbjct: 72  ASLRPSSASGPAIKRIKERKIHGHKVGKLIAGVDQNSYRWGYRDPATGELTGFDIDIVRA 131

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  IF DP  + Y  +   +R  ALQ  ++DI+ R        +    +AF    +  G
Sbjct: 132 IAKDIFGDPDAVIYRTIPTSQRIKALQQGKVDIVVRTMTINC--DRIKDVAFSTAYFQAG 189

Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEID 183
           Q  ++     I+  ++ L G  +C   G+T E  L +  K                 +  
Sbjct: 190 QQVLVPDDSSITGYNRTLRGKRVCTAQGSTAEAVLDEPEKGAEALGAIKVKPVPNQLDCL 249

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +  + DA   D +        +       ++    +      A+ + D +    V+ 
Sbjct: 250 VRLQMGQVDAVITDNALAAGQAAQDP---SVKLVGPRFTDELYGVAMNKNDDDLVRRVNQ 306

Query: 244 TH 245
             
Sbjct: 307 VL 308


>gi|149010773|ref|ZP_01832144.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|147765254|gb|EDK72183.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP19-BS75]
          Length = 254

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           ++ L  L         + + DI+KRG L  G+   +  F       G + G + D  + +
Sbjct: 1   MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +     KI+Y+P+ A+ R   L ++Q+D+       T  R+      F    Y D  
Sbjct: 61  ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+++K   I  +  L+G +I V  G+ T+  + +  K   +K+  +      E+  +  
Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           AHR DA++ D S L              +L D    S  +    + +TE  + +      
Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTELNDYLDNLVTK 230

Query: 248 M 248
            
Sbjct: 231 W 231


>gi|3603430|gb|AAC35851.1| amino acid-binding protein Abp [Streptococcus uberis]
          Length = 277

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 79/252 (31%), Gaps = 12/252 (4%)

Query: 2   YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K    ++     LF  +     +         KK   +  G +   V       +G   
Sbjct: 4   KKILLTTLALASTLFLVACGKSSAAKTDQWDTYKKEKSITLGFDNTFVPMGFKDESGKNT 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+  +A+         K+++ P+N   +   L++ +ID++      T  R+    +A
Sbjct: 64  GFDVELAKAVFQEYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSVTKERQA--KVA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174
           F      + Q  +  K   I+S + + G  +  Q+G++         K            
Sbjct: 119 FSTPYMKNEQVLVTKKSSNITSFAAMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDNDAT 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E   +     +  R D    D              + + I+         A  + + D
Sbjct: 179 QYETFIQAFIDLKNDRIDGLLIDKVYANYYLKQEGELTNYNIVKSEFDGEDFAVGVRKED 238

Query: 235 TEWYNIVSWTHY 246
                 ++    
Sbjct: 239 KILLKNINSAFT 250


>gi|302525507|ref|ZP_07277849.1| glutamate binding periplasmic protein [Streptomyces sp. AA4]
 gi|302434402|gb|EFL06218.1| glutamate binding periplasmic protein [Streptomyces sp. AA4]
          Length = 301

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 92/256 (35%), Gaps = 11/256 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + I   IK  G +  G+        +     G ++GFD++  R +++ +     KI+Y  
Sbjct: 54  SPIFAKIKSAGTITIGVKDDQPELGQKDPKTGKFQGFDIEIARMVAAGLGISEDKIKYTT 113

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141
           +++  R  A+ + Q+D+          R+    ++F    +  GQ  ++ K    I+   
Sbjct: 114 VDSGAREQAISNGQVDLYVGTYTINDKRKKL--VSFAGPYFQAGQDLLVRKDDTSITGPE 171

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  +C   G+T    +    +   +    + F++  +          DA T D + L
Sbjct: 172 TLKGKKVCSVTGSTPIQRV----REQKLTDQIVEFQKYSQCVEKLTTKDVDAVTTDDAIL 227

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM-VTAEELGITQKN 260
                    P    ++    SK P    + + D    + +     A         I    
Sbjct: 228 KGYAAQ--DPDSFKVVGKPFSKEPYGIGLNKDDKVLRDKIDDLLQAAETNGTWKKIYDAT 285

Query: 261 INQVSKDTTNPDVQRF 276
           + +     T P ++R+
Sbjct: 286 LGKSGAPATPPAIERY 301


>gi|218245993|ref|YP_002371364.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           8801]
 gi|257059044|ref|YP_003136932.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
 gi|218166471|gb|ACK65208.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8801]
 gi|256589210|gb|ACV00097.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
          Length = 255

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 18/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  +I    S + +A  L +I KRG L   +   +        NG+ +G +
Sbjct: 1   MRKILSSLLISGLIAALISPAWSAE-LEEILKRGQLIVAVKDNVRPLGFSDQNGELQGLE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L+  +  DP  + + P++ ++R   +  +++D+       T  R     + F P
Sbjct: 60  IDLARRLAEELLGDPQAVIFQPVSNQKRLQMVIDQEVDLAIARVSVTPSRNRL--VDFSP 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y DG G +  K+  +  V+ L+   I V   ++T   +   F         +     E
Sbjct: 118 YYYLDGTGLVT-KQSYLGGVAGLAKGKIAVLRVSSTIAVIRAEFPQA----ELVGVNSYE 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-------G 233
           E          DA+ GD S L           +    P  +S   L   + +        
Sbjct: 173 EALRLLENETVDAFAGDNSILAGWVQDYPSYRQW---PVRLSGEALGVVMPKGLQYASLR 229

Query: 234 DTEWYNIVSWTHYAMV 249
           D     IV W     +
Sbjct: 230 DRVNRAIVRWQKSGWL 245


>gi|323142139|ref|ZP_08076984.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Phascolarctobacterium sp. YIT 12067]
 gi|322413399|gb|EFY04273.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Phascolarctobacterium sp. YIT 12067]
          Length = 274

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 76/257 (29%), Gaps = 13/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K  F+ +  L                  +    L+ G       F   K     + GF
Sbjct: 17  MKKILFLVMAVLTAASMMIAGCGGGDKKAAEPEKVLRVGTEPTFAPFEFQKEGSKSYDGF 76

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  RA+   +      ++ + +       AL S  ID+++        R+    + F 
Sbjct: 77  DMDLARAIGKQMGYK---VEIVSMGFDALIPALNSGNIDVVAAGMSINEERQK--AVTFS 131

Query: 120 -PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            P         +      + SV  L G  I  Q GTT E    +   A         F  
Sbjct: 132 EPYYTSGLIVMVNKDNNEVKSVKDLEGKRIACQIGTTGEKNARNVANAK-----VTAFNT 186

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E     +    DA   D   +          S    + DI+       A+ +G+ +  
Sbjct: 187 NDEAVMELKNKGVDAIINDSPVVGYYLAQGGNAS-MKTVGDIMEAEQYGLAVKKGNDKLA 245

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     +    E  
Sbjct: 246 GEINKALAELKKNGEYD 262


>gi|222082710|ref|YP_002542075.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727389|gb|ACM30478.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 262

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 4/244 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +     S L ++  RG L  G  +    +    A+   +GFD+D  R ++ A+F DP K
Sbjct: 3   AAAQQAKSKLDEVLARGHLVMGTGSTNAPWHFKSADDKLQGFDIDMGRIVAKALFGDPDK 62

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I+++  ++  R   + + ++D+  +    T  R  +  +AF    Y +G G ++      
Sbjct: 63  IEFVNQSSDARIPNITTDKVDLTCQFMTVTGER--AQQIAFTIPYYREGVGLMLKADGKY 120

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +  + L  A   V       +       A         +E V+ I  A  + R DA   D
Sbjct: 121 ADYAALKAAGSSVTISVLQNVYAEAMVHAALPDATVDQYESVDLIYQALESGRADAVATD 180

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            S+L         P  +       +    A  + +GD +W N V+   +  +T  E    
Sbjct: 181 QSSLAWYMTQ--NPGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDFY 238

Query: 258 QKNI 261
             + 
Sbjct: 239 AASY 242


>gi|241762841|ref|ZP_04760904.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241368016|gb|EER62221.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 265

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 67/211 (31%), Gaps = 7/211 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++                GFD+D  +  +  +     ++++ P++   +   L  
Sbjct: 39  KIVVGLDDNFPPMGFRDDKNQLVGFDIDMAKEAAKRLG---LEVEFKPIDWSAKEAELSG 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K++D L      T  R+    +AF      + Q  ++     I + + L+G  +  Q G+
Sbjct: 96  KRVDALWNGLTITEERK--QNIAFTAPYMENHQIIVVPAGSAIKTKADLAGKVVGAQEGS 153

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           +    +               F             R +A   D   +        +P  +
Sbjct: 154 SAVDAIKKEDAVFKSFKEFKTFGDNVTALMDLTTGRLEAVVVDE--VVGRYYVAKKPDAY 211

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +L D          + + DTE +  +    
Sbjct: 212 AVLGDNFGTEEYGVGLRKDDTELHGKLEKAL 242


>gi|238027537|ref|YP_002911768.1| extracellular solute-binding protein, family 3 [Burkholderia glumae
           BGR1]
 gi|237876731|gb|ACR29064.1| Extracellular solute-binding protein, family 3 [Burkholderia glumae
           BGR1]
          Length = 264

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 77/237 (32%), Gaps = 14/237 (5%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           +      + +  A +L  +K+RG L+ G+      F      GD  G+DVD  +A+++ +
Sbjct: 15  IGASLVAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLVGYDVDIAKAVAAKL 74

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
              P    ++          LQ+ + D++      T  R+    L F P   +     I 
Sbjct: 75  GVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGVTDKRKEV--LDFSPAYTYSAAQLIQ 129

Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            K       S+  L G  + V  GT                     +    E      A 
Sbjct: 130 RKDDPRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGAPEYLRDLAAG 184

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           R DA   D   L  L   +  P        + +  P A    +G+ ++   +     
Sbjct: 185 RLDAALNDRLMLAYLLKNSQLP--LRTGATLQAGEPSAIPFKKGNPKFAKAIDDAMT 239


>gi|158425756|ref|YP_001527048.1| putative amino acid ABC transporter substrate binding protein
           [Azorhizobium caulinodans ORS 571]
 gi|158332645|dbj|BAF90130.1| putative amino acid ABC transporter substrate binding protein
           [Azorhizobium caulinodans ORS 571]
          Length = 304

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 86/258 (33%), Gaps = 10/258 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   ++ L L  +  T+    A  L DI K G +K  +      F  V  +    G+D+
Sbjct: 46  RRTLVLAGLGLAAVSLTALPARADALDDIMKAGVIKIAVPQDFPPFGSVGPDLKPVGYDI 105

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++  +      +    + +  R   LQ+K++D++  +      RE  +   F   
Sbjct: 106 DMANLIAQKLGVKAELVP---VTSANRIPYLQTKKVDLVISSLGKNPDREKVM--DFSVA 160

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G        ++   +L+G ++ V  G   ++ L+    A         FE    
Sbjct: 161 YAPFFNGAFAPADVKVTKPEELAGLTVGVTRGANEDIELSKIAPA---TADIKRFEDNNA 217

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +A+ + +            A+      P     +  +I  SP    + + + +    V
Sbjct: 218 TISAFLSGQVKVIVTGNVTAAAILAR--NPPRKPEVKFLIKDSPCYVGLNKDEPKLLEKV 275

Query: 242 SWTHYAMVTAEELGITQK 259
           +    A      L    +
Sbjct: 276 NAIITAAKADGALNAISQ 293


>gi|221069035|ref|ZP_03545140.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|220714058|gb|EED69426.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
          Length = 269

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 31/288 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53
           M K   ++ + L  +          ++               L  G++            
Sbjct: 1   MKKRTLLASVALTAILAACGKNEPASNTAAAPAPAPAAVAAKLVVGLDDNFPPMGFRDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D  R ++        ++Q+ P++   +   L  K++D L         R+  
Sbjct: 61  NELVGFDIDMAREVAKRA---NIEVQFKPIDWNAKEAELLGKRVDALWNGLTILEERKE- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F      + Q  I+     I   + + G  +  Q G++    L    +  +     
Sbjct: 117 -KILFSDPYMVNKQIIIVKAGSPIKGKADMVGKVVGAQEGSSAVTALTKDKELSDKFKET 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +F           A R D     +  +      N +P  +V+L +            + 
Sbjct: 176 KLFGDNIAAMMDLEAGRLD--VVVVDEVVGRYYVNKKPDNYVVLAEDFGTEDYGVGFRKD 233

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280
           D    N V+                    ++ KD    ++ Q++ G D
Sbjct: 234 DEATRNKVNDVLT----------------EMKKDGKAAEIAQKWFGAD 265


>gi|306823349|ref|ZP_07456724.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium dentium ATCC 27679]
 gi|304553056|gb|EFM40968.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium dentium ATCC 27679]
          Length = 311

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  L +IKK G LK  + +    F  V  +G++ G+DV F   L+  +        Y  +
Sbjct: 63  ARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSV 119

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +   R   L S ++D+   N   T  R+    + F         G +  +   I+ VSQL
Sbjct: 120 DPAARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQL 177

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V  GTT E      F+ +        +++  +   A    R DA++ D + + A
Sbjct: 178 KGKTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 233

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                      V +  +  +  +APA+ +G+ E  + ++ 
Sbjct: 234 WA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 271


>gi|116513425|ref|YP_812331.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092740|gb|ABJ57893.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 286

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%)

Query: 1   MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M K       + I+ LI++   +            T  S         +IK+RG+++  +
Sbjct: 1   MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V   G   G+DV   R ++  +     KI+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S  +L G  + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                A     + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
             +  +APA+ +G+       +
Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250


>gi|288935409|ref|YP_003439468.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|288890118|gb|ADC58436.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 261

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++     L  +  +  A  L DI+KRG ++  +      F  V  +   +G+D
Sbjct: 1   MKK-LLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L+ ++     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F  
Sbjct: 60  IDMARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +   + LSG SI V  G   ++ L               +E   
Sbjct: 115 AYAPFFLGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVLTSVAPQA---AQIKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + +          + A+  +     +  +   ++  SP    + + +      
Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAI--SRQNADKAPVPSFMLKDSPCFIGLKKNEPALKEK 229

Query: 241 VSWTH 245
           V    
Sbjct: 230 VDTLI 234


>gi|238788347|ref|ZP_04632141.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC
           33641]
 gi|238723593|gb|EEQ15239.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC
           33641]
          Length = 262

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 80/250 (32%), Gaps = 16/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V  +  + L             +L  +K+RG L  G+      F+    +G   
Sbjct: 1   MVRRQVVLGMVAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+VDF  AL+  +       +  P        +L+SK+ID+       +  R+      
Sbjct: 61  GFEVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISEERKK--KYD 115

Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F       G   +  K      +    L G  + V  G+  E  L D  K          
Sbjct: 116 FSTPYTISGIQVLTKKGNEGKFNKPEDLEGKKVGVGLGSNYEQWLRDNLK----GVDIRT 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++         R  R DA   D   L AL L         +     ++     A+ + + 
Sbjct: 172 YDDDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLAVAGPAFARQESGVALRKNNP 229

Query: 236 EWYNIVSWTH 245
           E    ++   
Sbjct: 230 ELLAAINQAI 239


>gi|325125055|gb|ADY84385.1| Glutamine ABC transporter substrate-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 286

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%)

Query: 1   MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M K       + I+ LI++   +            T  S         +IK+RG+++  +
Sbjct: 1   MKKKNIFNIIMGIVALIVVVSAAYFGFTQSNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V   G   G+DV   R ++  +     KI+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S  +L G  + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                A     + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
             +  +APA+ +G+       +
Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250


>gi|330981319|gb|EGH79422.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 283

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 95/252 (37%), Gaps = 4/252 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +    +L  T  +   S L  + KRG L  G  +    +    A+G  +GFD+D
Sbjct: 9   KACAFVLSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R   +        
Sbjct: 69  IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAS--TLPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +G   ++        +  L  A   V       +   +       K     ++ V+ +
Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+
Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244

Query: 243 WTHYAMVTAEEL 254
              +  +T  E 
Sbjct: 245 TALHEAMTGVEF 256


>gi|120612858|ref|YP_972536.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120591322|gb|ABM34762.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 303

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 9/242 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFD---- 73
               A  +  I++   +  G+      F+ V A   G   G+ VD C+A+   I +    
Sbjct: 24  AQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEEIKNTLKL 83

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++Y  ++A ER   L++ +ID+   +T  T  R+  +   F P  +  G   ++ K
Sbjct: 84  KDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKARQERVA--FGPTMFVAGIRVLVPK 141

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                +V  L+G ++ V  G+T+E  L     A+ +K    VF+  +E   A RA    A
Sbjct: 142 GTKADTVQNLAGMTVAVSKGSTSEKLLTQ-LTANEVKAKVKVFDNNDEAFKALRAGTVKA 200

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +  D S L  L   N       +   ++S  P A  + + DT    +V  T   + T+ E
Sbjct: 201 FAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKNDTALMTVVDRTLGKLYTSRE 260

Query: 254 LG 255
           + 
Sbjct: 261 ID 262


>gi|238787904|ref|ZP_04631700.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia frederiksenii ATCC 33641]
 gi|238723852|gb|EEQ15496.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia frederiksenii ATCC 33641]
          Length = 263

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L   ++   + S  A  L  I++RG L+  +      F  V  +   +G+D
Sbjct: 3   MKKRML-AWLGAALILVQAPSVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    +AF  
Sbjct: 62  IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +    QL+G ++ V  G   ++ L++       +     +E   
Sbjct: 117 AYAPFFLGVFGAKDDALQQPEQLAGKTVGVTRGAVEDMVLSELAPK---QAQIKRYEDNN 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + + D        L    L    P    +   ++  SP    + QG+      
Sbjct: 174 TTLSAYLSGQVDYLATGN--LVVSALARQNPVHAPVAKFMLKDSPCYIGLRQGEPALKAK 231

Query: 241 VSWTH 245
           V    
Sbjct: 232 VDALI 236


>gi|296129397|ref|YP_003636647.1| extracellular solute-binding protein family 3 [Cellulomonas
           flavigena DSM 20109]
 gi|296021212|gb|ADG74448.1| extracellular solute-binding protein family 3 [Cellulomonas
           flavigena DSM 20109]
          Length = 294

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 90/269 (33%), Gaps = 33/269 (12%)

Query: 6   FVSILCLIILFFTSFST-----------------------NASILGDIKKRGFLKCGINT 42
            ++++   +L  T+ +                          S +  + + G +  G   
Sbjct: 8   LIALMSATVLALTACAGGSDDAGTTEPAGESTAEETAEFPEGSTMARLAEAGSITIGTKF 67

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               F  V  NG  +GFDV+  + ++  +   P  I++    +  R   +++ ++DI+  
Sbjct: 68  DQPLFGLVGPNGVPEGFDVEIGKLIAGKLGIAPEDIEWKESISANREPFIENGEVDIVIA 127

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLA 161
                  R+    ++F    Y  GQ  +       I     L+G ++C  +G+T E  L 
Sbjct: 128 TYTINDKRKEV--VSFAGPYYLAGQSILTLKSNTDIQGPEDLAGKNVCTVSGSTPEANLL 185

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           +    +             E     R  + DA + D   L           +  +  D  
Sbjct: 186 E----NYPDATVQALGAYSECIEPLRNGQVDAISTDNVILAGFAA---DNDDLEVRGDPF 238

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           ++ P    +   DTE+ N ++        
Sbjct: 239 TEEPYGIGLALDDTEFRNWINDVLEESFE 267


>gi|149203652|ref|ZP_01880621.1| putative ABC transporter periplasmic amino acid-binding protein
           [Roseovarius sp. TM1035]
 gi|149142769|gb|EDM30811.1| putative ABC transporter periplasmic amino acid-binding protein
           [Roseovarius sp. TM1035]
          Length = 268

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 89/255 (34%), Gaps = 8/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L+ +   + +  A  L DI   G L+C +           AN    GFD
Sbjct: 1   MKK--VTLFAALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPPMGMRDANNVPIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L++A+  +   ++       ER  AL S ++D+   +T  TL R  ++G  F  
Sbjct: 59  VDYCNDLAAALGVEAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVG--FSI 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +        +   GI+S   + G ++   AGT   + L    K          ++   
Sbjct: 114 PYFAFEMAVTANSGTGITSYEGMKGHTVGAVAGTYEAIALEAQVKEWGEG-EFRPYQTQA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + DA     +   A   + +     V+         +A    + +  + N 
Sbjct: 173 DVFLALSQGQLDATVSTSTVAQANVQSGNYKDITVVGFAPFDTDYVALFAKRDEYGFLNY 232

Query: 241 VSWTHYAMVTAEELG 255
           +       V      
Sbjct: 233 LDLFVNQQVRTGRYD 247


>gi|225620106|ref|YP_002721363.1| family 3 extracellular solute-binding protein [Brachyspira
           hyodysenteriae WA1]
 gi|225214925|gb|ACN83659.1| extracellular solute-binding protein, family 3 [Brachyspira
           hyodysenteriae WA1]
          Length = 279

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 82/266 (30%), Gaps = 26/266 (9%)

Query: 1   MYK--DFFVSILCLIILFFT---------------SFSTNASILGDIKKRGFLKCGINTG 43
           M +     + I+   I+                  + S   + L  +K  G L  G++  
Sbjct: 1   MKRISSILLFIIFAFIVSCGGGNNTSSTDTNSAGNATSAEDNSLQKVKDAGKLVLGLDDT 60

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
                    NG+  GFD+D  + +++ +      ++  P+      L+L    +D+L   
Sbjct: 61  FAPMGFRDENGEVVGFDIDLAKEVANRLG---VTLEIKPIEWSSSILSLNKGDVDVLWNG 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLAD 162
                 R     + F      +    +       I+S   LSG  + VQ G+  E   AD
Sbjct: 118 VTINEAR--KQQINFSKPYLNNKLVIVKASDDNTINSKDDLSGKVLGVQVGSNDEALTAD 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
               +        ++         +A R DA   D  A          P   V+    ++
Sbjct: 176 PSSKN--AKEIRRYDVNVNAFLDLQAKRIDAVVIDEVAAQYYIAEKKAP-FVVVENSPLT 232

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +        + D +    V      M
Sbjct: 233 EELYGIGFRKSDAKLLAEVDRILDEM 258


>gi|238765045|ref|ZP_04625981.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia kristensenii ATCC 33638]
 gi|238696731|gb|EEP89512.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia kristensenii ATCC 33638]
          Length = 263

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 16/260 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL   ++   + +  A  L  I++RG L+  +      F  V  +   +G+D
Sbjct: 3   MKKRML-AILGAALILVQAPTVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +     K+Q +P+++  R   LQ+ ++D++  +      RE    +AF  
Sbjct: 62  IDMAHYLADKM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K+  +   +QL+G ++ V  G   ++ L++             +E   
Sbjct: 117 AYAPFFLGVFGAKEDALQQPAQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNS 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + + +        L    L    P++  +   ++  SP    + QG+      
Sbjct: 174 TTLSAYLSGQVNYLATGN--LVVSALARQNPAQAPVAKFMLKDSPCYIGLRQGEPALKAK 231

Query: 241 VSWTHYAMVTAEELGITQKN 260
           V       + AE L     N
Sbjct: 232 VD-----ALIAEALQDQTLN 246


>gi|150391393|ref|YP_001321442.1| extracellular solute-binding protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149951255|gb|ABR49783.1| extracellular solute-binding protein, family 3 [Alkaliphilus
           metalliredigens QYMF]
          Length = 280

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 91/272 (33%), Gaps = 33/272 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------------------TNASILGDIKKRGFLKC 38
           M K      L +++LF    +                       +   L DI  RG L  
Sbjct: 1   MMKKLGTVFLIMMLLFMVGCAGENVEPVETDPDMDSDANVEIDVDGGTLEDINARGSLTF 60

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
            +      F  +  +G   GFD+D   A++  +  +   +    +        L S + D
Sbjct: 61  AMTGAYPPFNFIDTDGQLIGFDIDIANAIAEKMGVEAEPMT---VLWDGIISGLTSGRFD 117

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
           ++  +   T  R     + F    Y+DG  F   ++   + +SQ+  A++ V  GTT + 
Sbjct: 118 MIIGSMAITDER--LERVNFSTPYYYDGAQFFGSEELEENDLSQIEDAAVGVVTGTTFQD 175

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            L D           + FE   +   A +  R D        L  L            + 
Sbjct: 176 FLVDME----NVTDILQFESDVDNMRAVQQGRSDGLITG--LLVGLHGIESFDMPLKPVG 229

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + +    +  AI + DT+  + V+     ++ 
Sbjct: 230 EPLYIEEIGIAIRKDDTDLLDAVNDALQEIIQ 261


>gi|325686267|gb|EGD28309.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 286

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%)

Query: 1   MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M K       + I+ LI++   +            T  S         +IK+RG+++  +
Sbjct: 1   MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V   G   G+DV   R ++  +     KI+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNDQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S  +L G  + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                A     + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
             +  +APA+ +G+       +
Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250


>gi|264676834|ref|YP_003276740.1| cystine-binding periplasmic protein [Comamonas testosteroni CNB-2]
 gi|299529654|ref|ZP_07043091.1| cystine-binding periplasmic protein [Comamonas testosteroni S44]
 gi|262207346|gb|ACY31444.1| cystine-binding periplasmic protein [Comamonas testosteroni CNB-2]
 gi|298722517|gb|EFI63437.1| cystine-binding periplasmic protein [Comamonas testosteroni S44]
          Length = 269

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 31/288 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53
           M K   ++ + L  +          ++               L  G++            
Sbjct: 1   MKKRTLLASVALTAILAACGKNEPASNTAAAPAPAPAAAAAKLVVGLDDNFPPMGFRDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D  R ++        ++++ P++   +   L  K++D L         R+  
Sbjct: 61  NELVGFDIDMAREVAKRA---NIEVEFKPIDWNAKEAELLGKRVDALWNGLTILEERKE- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F      + Q  I+     I   + + G  +  Q G++    L    +  +     
Sbjct: 117 -KILFSDPYMVNKQIIIVKAGSPIKGKADMVGKIVGAQEGSSAVTALTKDKELSDKFKET 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +F           A R D     +  +      N +P  +V+L +            + 
Sbjct: 176 KLFGDNIAAMMDLEAGRLD--VVVVDEVVGRYYVNKKPDNYVVLAEDFGTEDYGVGFRKD 233

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280
           D    N V+                    ++ KD    ++ Q++ G D
Sbjct: 234 DEATRNKVNDVLT----------------EMKKDGKAAEIAQKWFGAD 265


>gi|119719815|ref|YP_920310.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5]
 gi|119524935|gb|ABL78307.1| extracellular solute-binding protein, family 3 [Thermofilum pendens
           Hrk 5]
          Length = 279

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 92/270 (34%), Gaps = 25/270 (9%)

Query: 2   YKDF-----FVSILCLIILFFTSFS----TNASI------LGDIKKRGFLKCGINTGLVG 46
            K       F+++  + +L  TS       +AS       +  IK RG L  G +     
Sbjct: 5   KKTLGSIAKFLAVFAVGLLLGTSLGYFLWHSASTTQTVSYVDKIKARGKLIVGTSADWPP 64

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V  NG++ G D++  + ++  +     +++   +       AL++  +DI+  +   
Sbjct: 65  FEYVDKNGNYAGIDIEIAKRIAQELG---VQLEIKDMKFAALIEALKNGDVDIVIADMTP 121

Query: 107 TLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           T  RE    + F  P     G   I   K  I S   L G  I VQ GT  E    +  K
Sbjct: 122 TAEREKV--VDFSIPYYTSKGYAVITTAKSDIKSEQDLYGKKIGVQLGTIQEDWANNNLK 179

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                          E+  A +    DA         AL            +        
Sbjct: 180 --GKAEIKSYDRVYPEMVWALQRGDIDAMIVGDKIAEALITKEPSLKIATYVSIPTIGG- 236

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A A+ QG  +   +V+     ++ + E+ 
Sbjct: 237 -AVAVPQGAEDLKYVVNSVIEKLLESGEMN 265


>gi|288905749|ref|YP_003430971.1| ABC transporter, amino acid binding protein [Streptococcus
           gallolyticus UCN34]
 gi|306831847|ref|ZP_07465003.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|288732475|emb|CBI14047.1| Putative ABC transporter, amino acid binding protein [Streptococcus
           gallolyticus UCN34]
 gi|304426045|gb|EFM29161.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 272

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 109/279 (39%), Gaps = 19/279 (6%)

Query: 1   MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K           + +L L     T   + +  +  I+  G LK G+   +  F    A
Sbjct: 3   MKKKLGLAILASLSLILLTLFAGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 62

Query: 53  -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G ++G +VD  + ++  +      + +  + A+ R   L + QIDIL      T  R+
Sbjct: 63  ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTAQTREALLDNGQIDILIATYTITEERQ 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF+++K KG  S++ L G +I V  G+TT+  + +Y +AHN+ +
Sbjct: 120 ASYAI--SDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 177

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +      E+  +  A+R  A++ D S L              I+ +  +      A  
Sbjct: 178 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           + +    + ++           L       +       +
Sbjct: 233 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPATADD 271


>gi|270264104|ref|ZP_06192371.1| hypothetical protein SOD_g00350 [Serratia odorifera 4Rx13]
 gi|270041753|gb|EFA14850.1| hypothetical protein SOD_g00350 [Serratia odorifera 4Rx13]
          Length = 279

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 102/312 (32%), Gaps = 71/312 (22%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
            + +A  L DIKK G ++  +      F  +   +    G+DVD   A+  A+      +
Sbjct: 20  GAAHADKLDDIKKAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVADAIGKALGVK---V 76

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +    N   R   L SK++D+++ N   T  R     + F    +  GQ FI  K   + 
Sbjct: 77  ELRATNPANRIPLLVSKKVDLIAANFTITDERAK--EVNFSVPYFATGQKFIARKG-VLK 133

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +   +    I    GT  E+TL +++         I ++       A R     A T D 
Sbjct: 134 TPEDIKKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFVALRNGNVQAITQDD 189

Query: 199 SALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           + L  L          +  I P  I+K      I +G+      ++ T            
Sbjct: 190 AKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTASINDTL----------- 238

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE---MFDRN 313
                                           + L KD            GE   ++DR 
Sbjct: 239 --------------------------------IKLEKD------------GEAVKIYDRW 254

Query: 314 LGNQSELKIPRG 325
            G +++   PRG
Sbjct: 255 FGPETKTAQPRG 266


>gi|323701356|ref|ZP_08113030.1| extracellular solute-binding protein family 3 [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533615|gb|EGB23480.1| extracellular solute-binding protein family 3 [Desulfotomaculum
           nigrificans DSM 574]
          Length = 278

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 13/229 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            T  +    IK++G +  G++         + +G  +GFD+D    ++  +     KIQ+
Sbjct: 39  QTEKNTWEQIKEKGVMVVGLDNTFAPMGF-EKDGKLQGFDIDMGEEMAKRLG---IKIQW 94

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
            P        AL SK+ D++      T  R+    + F      DGQ   + K   G ++
Sbjct: 95  QPTQWDGVIPALLSKRFDVVISGMTITDERKK--QIDFSIPYVADGQVMAVKKGTTGFNT 152

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G  +  Q  ++ E  +              +++   E  A  +  R      D  
Sbjct: 153 AADLKGKVVGTQENSSGEEAVNKIEGIK----EKKLYKTYPEAFADLQIGRIPVVVVDRV 208

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              A     +RP    ++ + +++ P    I + D E    +      M
Sbjct: 209 T--AEYYLAERPGAFEVVGEQLTQEPFGIGIRKTDPELKAAIDKVLTDM 255


>gi|220920915|ref|YP_002496216.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945521|gb|ACL55913.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 267

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M     +++  + +L   + S  A  L DIKKRG L C        F+          G+
Sbjct: 1   MK---TLTLSLVALLSLGAVSARADQLDDIKKRGTLVCATLGTTEPFSFQDLTTRQTAGY 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFC+A++ A+      ++   +  + R   L   ++D+++ N  +T  R     + + 
Sbjct: 58  DVDFCKAIADALGVK---LELKLVAVEARIPELSQGRVDVVAANLGYTPERAE--QIDYS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   Q  +    +G  + S L G  +    G+T+EL + +   +       + F+  
Sbjct: 113 DFYYVSQQKLLARDAEGFKAASDLGGKRVSAIKGSTSELAVKNSIPSA----QTVTFQDA 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +  +  A+      L   +       E  IL   + + P    + +G+     
Sbjct: 169 PAAFLAMQQRKVAAFAASEIMLVKFRSQAGTGLE--ILEPSLMREPWGIGVRKGEKSLLA 226

Query: 240 IVSWTH 245
            V+   
Sbjct: 227 AVNKAL 232


>gi|84497113|ref|ZP_00995935.1| putative transporter substrate-binding protein [Janibacter sp.
           HTCC2649]
 gi|84382001|gb|EAP97883.1| putative transporter substrate-binding protein [Janibacter sp.
           HTCC2649]
          Length = 324

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 9/234 (3%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAI 71
             L   S   +AS +G IK RG L  G++             G  +GFD+D  + ++ AI
Sbjct: 62  GALPAPSGIPSASTMGKIKARGRLIAGVSADTRLLGSRNPLLGRIEGFDIDLVQQIADAI 121

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
               +K++   + A +R   LQ+ Q+D++ RN   T   +    +AF    Y  GQ  ++
Sbjct: 122 LGPNAKVELRVITAADRLPVLQNHQVDVVVRNMTITC--DRWKTIAFSAEYYRAGQKILI 179

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K   I+ ++ L+G  +C   GT++   L             +      E     +  + 
Sbjct: 180 RKGSTITGLASLAGKRVCAPTGTSSLDNLVRLAPKA----IAVPATTHTECLVNLQQGKV 235

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +A TGD + L  L      P   V+     +  P    I     +    V+   
Sbjct: 236 EAITGDDTVLAGLASQ--DPYAVVLSEKAFTAEPYGVGIAADQVDLVKFVNTVL 287


>gi|77415016|ref|ZP_00791094.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 515]
 gi|77158934|gb|EAO70167.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 515]
          Length = 200

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 10/200 (5%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGD 55
           M +   +++  L    I L F   ST+A+ L +IKK G LK G+   +  F    A    
Sbjct: 1   MLRRKRLTLYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYHNAETNQ 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++G ++D  + ++ ++   P    ++P  A+ R   + + QIDIL      T  R+ +  
Sbjct: 61  YEGMEIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYN 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +      Y D  GF++ K   I ++ +L G  I V  G TT++ L  Y K H +K+    
Sbjct: 118 I--SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAX 175

Query: 176 FERVEEIDAAYRAHRCDAYT 195
                E+  +  A+R DA++
Sbjct: 176 LGSFPELAISLYANRIDAFS 195


>gi|229125463|ref|ZP_04254520.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 95/8201]
 gi|228657991|gb|EEL13774.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 95/8201]
          Length = 262

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 82/249 (32%), Gaps = 14/249 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    + I+  +    T  S         K+   L  GI+           N    GF
Sbjct: 6   MKRLTTIILIIAAVFAVITGCSKP-----KEKEDNTLVIGIDDKFAPMGFRDENNKIVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D+ +A +  +    +K+++ P++ K +   L S +ID++      T   +    + F 
Sbjct: 61  DIDYAKAAAEKLG---TKVKFQPIDWKTKESELSSGRIDLIWNGYTITD--DRKNKVLFT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                + Q  +      ++ ++ L    + +Q+ ++    L        +K     F   
Sbjct: 116 KPYLKNAQVVVTLSNSPLTKLNNLEAKVVGLQSLSSASDALNSNPIKSKIK-TVTEFADN 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  ++ R DA   D   +              IL + +S       + +G+     
Sbjct: 175 VSALNDLKSGRLDAVVIDEVVINYYMTKEKD--TFKILDESLSPEEYGVGVKKGNDALLK 232

Query: 240 IVSWTHYAM 248
            +      M
Sbjct: 233 KLQKALDEM 241


>gi|257461484|ref|ZP_05626580.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441207|gb|EEV16354.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 268

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 97/246 (39%), Gaps = 18/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L  I          A+ L  IK+   ++  +      F+ V  NG ++GFD
Sbjct: 1   MKKSLFLILLSCIFAL-------ANSLSQIKQSKVIRIAVYENEPPFSRVTDNG-FEGFD 52

Query: 61  VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           V+   A+   I  D   +I+ +P++A+ RF ++Q+ Q D+L      T  R+      F 
Sbjct: 53  VELANAIGGKILGDTGGRIELIPVSAQARFPSIQNNQADMLIAAASVTEERKK--NYEFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I  +S L G  + V  G+T E      F   +  Y+ +  +  
Sbjct: 111 MPYLSVNSGVLTRKSDNIQKMSDLRGKKVGVIRGSTGEA-----FMQKDGGYNLVYCKNS 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     ++   D    D   L+ +      PS  V +  +     L  A+ +G+ +   
Sbjct: 166 SDCYKRLKSGEIDGACDDN--LFVMVYPVADPSVEVNIKSLGENVFLGIAMQKGNADLAE 223

Query: 240 IVSWTH 245
            V+   
Sbjct: 224 AVNQAL 229


>gi|221197837|ref|ZP_03570883.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
 gi|221204605|ref|ZP_03577622.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221213036|ref|ZP_03586012.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
 gi|221167249|gb|EED99719.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
 gi|221175462|gb|EEE07892.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221181769|gb|EEE14170.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
          Length = 264

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKFALLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFQKAIDDAMT 239


>gi|199599083|ref|ZP_03212489.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|258509003|ref|YP_003171754.1| ABC transporter amino acid-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|199590046|gb|EDY98146.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|257148930|emb|CAR87903.1| ABC transporter, amino acid-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|259650296|dbj|BAI42458.1| amino acid ABC transporter substrate binding component
           [Lactobacillus rhamnosus GG]
          Length = 274

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 81/226 (35%), Gaps = 9/226 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +  IL + K    +  G+      F  +    G  +GFDVD  +A++  I       Q 
Sbjct: 29  ADRDILANAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +  R   ++   +D +      T  R+    L F  + +  GQ  ++ K   I SV
Sbjct: 89  VQVTSDTRVPMIKGGNLDAVIATMTITPERQKI--LDFSDVYFNAGQSLLVKKGSPIKSV 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L   +  +    +      D  K        +      +   A ++ + DA T D   
Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNGI 203

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           LY +   +     +++     +K P   AI +G   + N V+    
Sbjct: 204 LYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVNAVNKAIK 246


>gi|226366164|ref|YP_002783947.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus
           opacus B4]
 gi|226244654|dbj|BAH55002.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus
           opacus B4]
          Length = 277

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 82/246 (33%), Gaps = 9/246 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++ L ++                  G L  GI     G      +G + GFDV+    
Sbjct: 11  IGVMALAVVASACGGGEEKSASQSASEGKLTVGIKYDQPGLGLRNPDGSFSGFDVEVAEY 70

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +   P  I++    + +R   +Q+ ++D +      T  R+    + F    +  G
Sbjct: 71  IAGKLGVAPENIEFKESPSAQRETLIQNGEVDYIVATYSITDARKE--KVDFAGPYFIAG 128

Query: 127 QGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           Q  ++       +  +    G  +C   G+T    + D +           F+       
Sbjct: 129 QSLLVKSDNTDITGPESLNGGKKLCSVTGSTPAQKVKDQYAQ---DVQLQEFDTYSACVE 185

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A R    DA T D   L         P E  ++    ++      + +GD E    ++  
Sbjct: 186 ALRNGAVDAVTTDDIILAGYAAQY--PGELKVVGAPFTQERYGVGLAKGDDETRAKINDA 243

Query: 245 HYAMVT 250
             AM+ 
Sbjct: 244 IEAMIA 249


>gi|289624706|ref|ZP_06457660.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650262|ref|ZP_06481605.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330865667|gb|EGH00376.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 265

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSALSLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +   +  I +   L+G  + V  GT  E  L    K +        ++   
Sbjct: 124 TVSGIQALVLKKNEDTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D  A   +          V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|146308593|ref|YP_001189058.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas mendocina ymp]
 gi|145576794|gb|ABP86326.1| L-ornithine-binding protein / L-arginine-binding protein
           [Pseudomonas mendocina ymp]
          Length = 258

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  ++  + L ++  + F+ +            L+ GI      FA  +ANG+  GFD
Sbjct: 1   MKKIAWLGAIALSLIASSPFAADKP----------LRLGIEAAYPPFAYKEANGEIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     + Q++         +L+ K++D +  +   T  R     + F  
Sbjct: 51  VDIGNALCAEM---KVQCQWVEQEFDGLIPSLKVKKVDAILSSMTITDERRK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y+     +M +   +    + L G  I VQ  TTT+   +    A       + +   
Sbjct: 106 KYYYSPARLVMKEGSTVDADFANLKGKRIGVQRATTTDRFASSVMAAQG--VQVVRYSSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPLAPAIIQGD 234
            EI     + R D    D   +    L          +                A+ +GD
Sbjct: 164 NEIYLDLISGRLDGTLADAIPVEEGFLKTPNGKGFAFVGPSFTDPAYFGEGAGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +E    ++    A+  + E    Q+     
Sbjct: 224 SELLGKLNAAIAAIRASGEYQQIQQRYFSF 253


>gi|317407117|gb|EFV87121.1| amino acid ABC transporter solute-binding protein [Achromobacter
           xylosoxidans C54]
          Length = 263

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 87/253 (34%), Gaps = 11/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M K   V ++    +      ++ +     +       +  G++          AN    
Sbjct: 1   MKKLTAVLLVSATTMLTACGPSDNAPAASAQAPAAARKVVVGLDDNFPPMGFRDANNQIV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +  S  +     ++++ P++   +   L  K++D+L      T  R+    ++
Sbjct: 61  GFDVDMAKEASKRLG---LEVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NIS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F      + Q  I+     + + + L+G  +  Q G++    +A    A         F 
Sbjct: 116 FTAPYMANHQIIIVGNASPVKAKADLAGKVVGAQDGSSATDAIAKDPVA-GSIKEVKKFG 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R DA   D   +    L + R  E+ +L D          + + DTE 
Sbjct: 175 DNVTALMDLAAGRLDAIVVDE--VVGRYLISKRAGEYRVLDDNFGTEDYGVGVRKDDTEL 232

Query: 238 YNIVSWTHYAMVT 250
              +  T  +M  
Sbjct: 233 LGKLDKTLDSMKQ 245


>gi|317133176|ref|YP_004092490.1| extracellular solute-binding protein family 3 [Ethanoligenens
           harbinense YUAN-3]
 gi|315471155|gb|ADU27759.1| extracellular solute-binding protein family 3 [Ethanoligenens
           harbinense YUAN-3]
          Length = 270

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 17/258 (6%)

Query: 2   YKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
            K   +++   + +   S    S++   L  IKK G L  G +     F           
Sbjct: 6   KKISSIALASALCVTMASCKSSSSSTDKLDAIKKAGVLVVGTSADYPPFEFHKQQNGQDK 65

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV+    ++  I      IQ+  ++      ALQS +ID++      T  RE    
Sbjct: 66  IMGADVEIAEQIAKKIGVK---IQWQDMDFDGLLPALQSGKIDMIIAGMIDTPEREK--A 120

Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    Y      I+ K      S +S LSG  I VQ GTT +  +  +  + +     
Sbjct: 121 VDFSHKYYLSTDQAIIRKDDLSKYSKLSDLSGKHIGVQLGTTQQDDMKKWLPSGDY---- 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +   +  ++    ++ + DA   +   + A    N       I     ++ P        
Sbjct: 177 VALGKDTDLILELKSKKVDAVILEEPIVKAYVSQNSDLVTANISFPKATQGPAVAVQKGN 236

Query: 234 DTEWYNIVSWTHYAMVTA 251
           D E+ + ++     +V++
Sbjct: 237 DKEFLSTINSVVDGLVSS 254


>gi|317047031|ref|YP_004114679.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316948648|gb|ADU68123.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 261

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 93/245 (37%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++    ++     S  A  L DI+KRG ++  +      F  V  +   +G+D
Sbjct: 1   MKK-VLMAVAGAALMMAQVGSAMADQLQDIQKRGVIRIAVPQDFPPFGSVGTDLQPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L+  +     K+Q +P+++  R   LQ+ ++D++  +      RE    + F  
Sbjct: 60  IDMAKYLAKEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFSR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K + I   + LSG SI V  G   ++ L               +E   
Sbjct: 115 AYAPFFLGVFGPKGEEIKDAAALSGKSIGVTRGAVEDMVLTGVAPK---DAEVKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + +          + A+      P++  +   ++  SP    + + +    + 
Sbjct: 172 TTLSAYLSGQVQFIATGNLVVAAIARQ--NPAKAPVPQFMLKDSPCFIGLKKDEPALKDK 229

Query: 241 VSWTH 245
           V+   
Sbjct: 230 VNALI 234


>gi|317494652|ref|ZP_07953064.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917254|gb|EFV38601.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 277

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 13/227 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +A  L DI+K G ++  +      F  V        G+DVD   A+  A+      ++ 
Sbjct: 21  AHADKLDDIQKAGVVRVAVFDSNPPFGYVDPQTKKLVGYDVDVADAIGKALGVK---VEL 77

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
              N   R   L SK++D+++ N   T  R     + F    +  GQ FI  K   +   
Sbjct: 78  RATNPANRIPLLASKKVDLIAANFTITPERAK--EVNFSVPYFRTGQKFIARKG-VLKQP 134

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             ++   I    GT  E+TL D +         I ++      AA R     A T D + 
Sbjct: 135 DDIAKLRIGADKGTVQEITLRDKYPTAK----VISYDDTPLAFAALRNGNVQAITQDDAK 190

Query: 201 LYALKLTNDRP--SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L  L         ++  I P  I+K      + +G+    + V+   
Sbjct: 191 LVGLLANVPDAAKADFEISPFSITKEYQGIGLPKGEDRLTDKVNTAL 237


>gi|171780123|ref|ZP_02921027.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281471|gb|EDT46906.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 272

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 108/279 (38%), Gaps = 19/279 (6%)

Query: 1   MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K           + +L L     T   + +  +  I+  G LK G+   +  F    A
Sbjct: 3   MKKKLGLAILASLSLILLTLFTGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 62

Query: 53  -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G ++G +VD  + ++  +      + +  +  + R   L + QIDIL      T  R+
Sbjct: 63  ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTPQTREALLDNGQIDILIATYTITEERQ 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF+++K KG  S++ L G +I V  G+TT+  + +Y +AHN+ +
Sbjct: 120 ASYAI--SDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 177

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +      E+  +  A+R  A++ D S L              I+ +  +      A  
Sbjct: 178 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           + +    + ++           L       +       +
Sbjct: 233 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPATADD 271


>gi|320095228|ref|ZP_08026929.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977842|gb|EFW09484.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 302

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 11/220 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
               IK+ G +  GI +    F  + A+G   G+DV +   +++ +       +Y+P++A
Sbjct: 50  TPEQIKEAGEITIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA---KYVPVDA 106

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R   LQS ++DI   N   T  R     + F    +    G +      I+ VSQL+G
Sbjct: 107 AARTEVLQSNKVDITLANFTVTPERAE--KVDFANPYFKVSLGVVSPASAEITDVSQLAG 164

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ V  GTT E      F+A++ +     +++  +   A    R DA++ D + + A  
Sbjct: 165 KTLIVTKGTTAEAY----FEANHPEVELQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWA 220

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +    P   V +  +   S +A A+ +G++   + ++   
Sbjct: 221 IA--HPGFGVGIKSLGETSYIAAAVKKGNSALLDWLNNQL 258


>gi|313885660|ref|ZP_07819409.1| ABC transporter glutamine-binding protein GlnH [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619025|gb|EFR30465.1| ABC transporter glutamine-binding protein GlnH [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 278

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 16/252 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVK-ANGDWK 57
               ++L +  +   S +  +    DI +R       +  GI      F      NG+ +
Sbjct: 13  SLIFTLLVITFVLVFSKAGTSVSQPDIVQRLSNKDQTIVWGIKNDTKLFGFYNIENGEIE 72

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  + L+  +  D    +++ + +K R   L++  ID +         R+    + 
Sbjct: 73  GFDIDVAKELTKRLTGDSKHAKFVEVTSKTRIPLLRNGNIDAIIATMTINEARKKV--VD 130

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICV-QAGTTTELTLADYFKAHNMKYHPIVF 176
           F    +  GQ  ++ K   I+S+  L  ++  V   G+T+   +             I  
Sbjct: 131 FTDTYFDAGQSLLVAKDSKINSIDNLDASTTVVSVKGSTSSQNIKKLAPQAK----LIEL 186

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E   E   A +A + DA T D + L  L    + P +  +  +  ++ P   A+ +   +
Sbjct: 187 ETYAEGLTALKAGQGDALTTDNAILLGLIS--ENP-DFRLAGENFTEEPYGIAVNKNQAD 243

Query: 237 WYNIVSWTHYAM 248
           + N ++    AM
Sbjct: 244 FKNQLNQALAAM 255


>gi|238794027|ref|ZP_04637645.1| Cystine-binding periplasmic protein [Yersinia intermedia ATCC
           29909]
 gi|238726659|gb|EEQ18195.1| Cystine-binding periplasmic protein [Yersinia intermedia ATCC
           29909]
          Length = 262

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 81/251 (32%), Gaps = 15/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +        +L  +K RG L  G+      F+    +G   GF
Sbjct: 3   RRRVVLGMVAVALATGLNVKSYAAGDLLSQVKDRGTLIVGLEGTYPPFSFQGEDGKLTGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L+SK+ID+       +  R+      F 
Sbjct: 63  EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISEERKK--KYDFS 117

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      +    L G  + V  G+  E  L D  K          ++
Sbjct: 118 TPYTISGIQVLTKKGNEGNFTKPEDLEGKKVGVGLGSNYEQWLRDNLK----GVDIRTYD 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L         +     ++     A+ + + E 
Sbjct: 174 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTGGTLAVAGSAFARQESGVALRKNNPEL 231

Query: 238 YNIVSWTHYAM 248
              ++     M
Sbjct: 232 LAAINQAITEM 242


>gi|326779309|ref|ZP_08238574.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
 gi|326659642|gb|EGE44488.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 346

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD 73
                 S +   +  IK+RG L  G++     +        + +GFD+D  RA++  +  
Sbjct: 71  ASLPPSSADGPGIEKIKQRGKLIAGVDQNSFRWGYRNPEARELEGFDIDLVRAIAKDVLG 130

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DP  + +  +   +R  AL++ ++D++ R       R     ++F    +  GQ  +  K
Sbjct: 131 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 188

Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183
              I+     L G  +C   G+T    L          D F         +      +  
Sbjct: 189 GSTITGYDASLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTARDPDLLTVPNQLDCL 248

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +           P+  +      +      A  +G  +    V+ 
Sbjct: 249 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKAPFTTEYYGVATKKGADDLVARVNK 306

Query: 244 TH 245
             
Sbjct: 307 VL 308


>gi|331701269|ref|YP_004398228.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128612|gb|AEB73165.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus
           buchneri NRRL B-30929]
          Length = 287

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 78/233 (33%), Gaps = 8/233 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
                + K+  +  G++   V       +G   G+DVD  RA+         K+ + P++
Sbjct: 39  DTWSTVSKQKRIVVGLDDSFVPMGFQTKSGKIVGYDVDLARAVFKQYG---IKVDFQPID 95

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                  L++  ID++         R     + F      + Q  +  K + I+S + + 
Sbjct: 96  WSMNVTELRNGTIDLIWNGFSINPQRAK--KITFSEPYLINDQVLVSKKNQHINSFADMK 153

Query: 145 GASICVQAGTTTELTLADYFKAHNMKY---HPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           G    VQ+G+   + + +  K    K     PI+++   +      A+R      D    
Sbjct: 154 GKVAGVQSGSAGAMDIDNQPKLLKDKIKGHEPILYDTFTDAFIDLNANRIQGLLIDSIYA 213

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
                     S    +P    K      + +GDT     +      +    EL
Sbjct: 214 GYYLEHQPNQSSFKSIPSEFPKEEYGVGMRKGDTVLKRKIDQGLNRLAKNGEL 266


>gi|296141428|ref|YP_003648671.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
 gi|296029562|gb|ADG80332.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
          Length = 326

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 88/234 (37%), Gaps = 10/234 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71
             L         + + +I  RG L  GI+ G    +      G+ KGFD D    +++AI
Sbjct: 68  SSLPPAGQMAPGTTMAEIFDRGRLVVGIDIGSNLLSFRDPITGEIKGFDADIAHQIAAAI 127

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
           F DP+++ +  L+  ER  AL    +D++ +    T  R     + F    +   Q  + 
Sbjct: 128 FGDPNRVHFRILSTAERQQALIDGTVDVVVKTMSATCDRAK--QVDFSATYFIAQQRILA 185

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            +   I++V  LSG  +C   GTT+   +     +       I  +   +     +  + 
Sbjct: 186 PRGAPINTVGDLSGRRVCEVRGTTSLDRVRRLVPSA----TVIAADSWSDCLVMLQQQQV 241

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           DA + D + L  L+  +       +    +     A  I +   +    ++   
Sbjct: 242 DAVSTDDAILAGLEDQDPN---LTVTGPSMGLEYYAVGIGKNRPDLVRFINGVL 292


>gi|289674587|ref|ZP_06495477.1| cystine transporter subunit [Pseudomonas syringae pv. syringae FF5]
 gi|330938696|gb|EGH42254.1| cystine transporter subunit [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 265

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  +G   GF+
Sbjct: 7   RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +   +  I S   L+G  + V  GT  E    ++ KA+        ++   
Sbjct: 124 TVSGIQALVLKKNEDAIKSAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D   L AL++     ++ V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|152970318|ref|YP_001335427.1| cysteine ABC transporter periplasmic substrate binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|206576516|ref|YP_002238435.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|238894802|ref|YP_002919536.1| cysteine ABC transport system periplasmic substrate-binding
           component [Klebsiella pneumoniae NTUH-K2044]
 gi|262044440|ref|ZP_06017501.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|290509459|ref|ZP_06548830.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
 gi|330010551|ref|ZP_08306784.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|150955167|gb|ABR77197.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206565574|gb|ACI07350.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|238547118|dbj|BAH63469.1| cysteine ABC transport system periplasmic substrate-binding
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259038220|gb|EEW39430.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|289778853|gb|EFD86850.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
 gi|328534488|gb|EGF61076.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 261

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++     L  +  +  A  L DI+KRG ++  +      F  V  +   +G+D
Sbjct: 1   MKK-LLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L+ ++     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F  
Sbjct: 60  IDMARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +   + LSG SI V  G   ++ L               +E   
Sbjct: 115 AYAPFFLGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVLTSVAPQA---AQIKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + +          + A+  +     +  +   ++  SP    + + +      
Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAI--SRQNADKAPVPSFMLKDSPCFIGLKKNEPALKAK 229

Query: 241 VSWTH 245
           V    
Sbjct: 230 VDTLI 234


>gi|187930702|ref|YP_001901189.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|187727592|gb|ACD28757.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
          Length = 302

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 8/245 (3%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68
              F ++       L  I+  G +        + F+ +  +    G+ +D C      + 
Sbjct: 21  TAFFPSNAVAATPALDRIRDSGTVHVAYREDSIPFSYLDGS-KPVGYAIDICSRLIDSIK 79

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +++     K+QY+P+ A  R   + S + D+   +T     RE    +AF    Y     
Sbjct: 80  TSLKRPDLKVQYVPVTAATRMDVVASGKADLECGST--NNSRERREKVAFTIPHYITKGR 137

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++     I     L+G ++ V A  +T   LA       M    +    +    A    
Sbjct: 138 MLVRTGSPIQQWEDLNGKTV-VAARGSTNADLARKLNETGMTMQVVDANDLRSAFAMLAD 196

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            R +A+ GD   L  ++ T   P+++ +       S  A  + + D E+  ++  +   +
Sbjct: 197 GRANAFAGDDILLSGMRATAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRL 256

Query: 249 VTAEE 253
           +   E
Sbjct: 257 IVDGE 261


>gi|191638947|ref|YP_001988113.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus
           casei BL23]
 gi|190713249|emb|CAQ67255.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus
           casei BL23]
 gi|327382995|gb|AEA54471.1| Sugar binding protein [Lactobacillus casei LC2W]
 gi|327386183|gb|AEA57657.1| Sugar binding protein [Lactobacillus casei BD-II]
          Length = 274

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 9/226 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +  IL   K    +  G+      F  +    G  +GFDVD  +A++  I     K Q 
Sbjct: 29  ADRDILTTAKTTNTIFWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +  R   ++   +D +      T  R+    L F  + +  GQ  ++ K   I SV
Sbjct: 89  VQVTSDTRVPMIKGGNVDAVIATMTITPERQKI--LDFSDVYFNAGQSILVKKGSPIKSV 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L   +  +    +      D  K        +      +   A ++ + DA T D   
Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNGI 203

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           LY +   +     +++     +K P   AI +G   +   V+    
Sbjct: 204 LYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVNKAIK 246


>gi|209515706|ref|ZP_03264570.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209503942|gb|EEA03934.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 264

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 80/237 (33%), Gaps = 14/237 (5%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           +   F    +  A +L  +K+RG L+ G+      F     +G+  G+DVD  +A+++ +
Sbjct: 15  IGASFTAVAAHAADLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKL 74

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
              P    ++          LQ+ + D++      T  R+    L F P   +     I 
Sbjct: 75  GVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QTLDFSPAYTYSAAQLIQ 129

Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            K      +S+  L G  + V  GT                     +    E      A 
Sbjct: 130 RKDDTRQFTSLEDLKGKKLGVGLGTNYMD-----MAKAVPGIDVKTYPGAPEYLRDLAAG 184

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           R DA   D   L  L   ++ P       ++   +P      +G+ ++   +     
Sbjct: 185 RLDAALNDRLMLAYLLKNSNLP--LRTGANVGPGNPSGIPFKKGNPQFAKAIDDAMT 239


>gi|104773439|ref|YP_618419.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422520|emb|CAI97094.1| Amino acid ABC transporter, substrate binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 286

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%)

Query: 1   MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M K       + I+ LI++   +            T  S         +IK+RG+++  +
Sbjct: 1   MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V   G   G+DV   R ++  +     KI+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S  +L G  + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQKLKGKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                A     + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
             +  +APA+ +G+       +
Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250


>gi|317509500|ref|ZP_07967113.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
 gi|316252204|gb|EFV11661.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
          Length = 335

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 12/226 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
              L  I  RG L  G++ G   F+    A G+ KGFDV   R ++  +  DPS+++Y  
Sbjct: 79  GGRLDRILARGRLVVGLDQGTYPFSYRDTATGEMKGFDVAMAREIAGGMLGDPSRVEYRI 138

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +++  R  AL++  +D++ +    T  R     + F    +   Q  +       +S + 
Sbjct: 139 ISSAGRTTALENDTVDLVVKTMSITCERAK--DVTFSEPYFETDQRVMAATNANATSFTD 196

Query: 143 ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L  +++C   GTT+       F         +      +   A +    DA T D S
Sbjct: 197 RKILGESTVCAARGTTSIAQFHHLFPTAK----ILGTTTWADCLVAIQQGSVDAITSDES 252

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            LY        P+ + +    + +      + +G+ E   +++   
Sbjct: 253 ILYGFYDQ--DPNLYFLSAIQLGREVYGVGVHKGEEELQRVINGII 296


>gi|28872292|ref|NP_794911.1| cystine ABC transporter periplasmic cystine binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213969395|ref|ZP_03397532.1| cystine ABC transporter, periplasmic cystine binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301386654|ref|ZP_07235072.1| cystine transporter subunit [Pseudomonas syringae pv. tomato Max13]
 gi|302061131|ref|ZP_07252672.1| cystine transporter subunit [Pseudomonas syringae pv. tomato K40]
 gi|302132933|ref|ZP_07258923.1| cystine transporter subunit [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28855546|gb|AAO58606.1| cystine ABC transporter, periplasmic cystine binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213925766|gb|EEB59324.1| cystine ABC transporter, periplasmic cystine binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|331016086|gb|EGH96142.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 268

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 79/246 (32%), Gaps = 9/246 (3%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLSGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---RIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S + LSG  + V  GT  E  L    KA+        +E   
Sbjct: 124 TISGIQALVLKKNADTIKSANDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    R DA   D  A   +         E        S+     A+ +G+ E   
Sbjct: 180 TKIQDLSVGRIDAILVDRLAALEIAAKTKDTKRELAPAGAAFSRQESGIALRKGEPELLA 239

Query: 240 IVSWTH 245
            +    
Sbjct: 240 AIDKAI 245


>gi|183601790|ref|ZP_02963160.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|241190712|ref|YP_002968106.1| amino acid ABC transporter periplasmic component [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|183219396|gb|EDT90037.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|240249104|gb|ACS46044.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|289178450|gb|ADC85696.1| Glutamate-binding protein [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793701|gb|ADG33236.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 279

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 97/255 (38%), Gaps = 14/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   +      +    +  ++++          ++ GI     G      +G ++GFDV
Sbjct: 11  RKAIAMVCAASALFGMAACGSSSADGEK-----KIRIGIKYDQPGLGFK-KSGTFEGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +++ +    ++I++L   +K+R   LQ+  +D++      T  R+    ++F   
Sbjct: 65  DVARYVANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATYSITDERKK--AVSFAGP 122

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +  GQ  ++      I+    L+G  +C   G+T+   + + F     +   +      
Sbjct: 123 YFVAGQDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAK---EVQLMEQPGYA 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A  +   DA T D   L  L   +       ++    ++      I +GDT +   
Sbjct: 180 ECATALFSGIVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIRKGDTAFAKQ 237

Query: 241 VSWTHYAMVTAEELG 255
           ++     M+ + E  
Sbjct: 238 INAAIEDMIKSGEWE 252


>gi|16264462|ref|NP_437254.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Sinorhizobium meliloti
           1021]
 gi|307306767|ref|ZP_07586508.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|15140599|emb|CAC49114.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
 gi|306902058|gb|EFN32656.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 280

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 98/259 (37%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   F V+   +  +     +     +S L ++  RG L  G  +    +    A    +
Sbjct: 1   MISRFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  R ++ A+F DP KI+++  ++  R   + + ++DI  +    T  R  +  +A
Sbjct: 61  GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQIA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y +G G ++      +    L  A   V       +   D   A   +     +E
Sbjct: 119 FTIPYYREGVGLMLKADGKYADYEALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYE 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            V+ I  A  + R DA   D S+L            +       +    A  + +GD +W
Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQ--NSGRYKDAGYGWNPQTYACGVRRGDQDW 236

Query: 238 YNIVSWTHYAMVTAEELGI 256
            N V+   +  +T  E   
Sbjct: 237 LNFVNTALHEAMTGVEFDF 255


>gi|171740998|ref|ZP_02916805.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC
           27678]
 gi|171276612|gb|EDT44273.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC
           27678]
          Length = 311

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +IKK G LK  + +    F  V  +G++ G+DV F   L+  +        Y  ++ 
Sbjct: 65  TLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSVDP 121

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R   L S ++D+   N   T  R+    + F         G +  +   I+ VSQL G
Sbjct: 122 AARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQLKG 179

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ V  GTT E      F+ +        +++  +   A    R DA++ D + + A  
Sbjct: 180 KTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 235

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                    V +  +  +  +APA+ +G+ E  + ++ 
Sbjct: 236 --KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 271


>gi|148642867|ref|YP_001273380.1| polar amino acid ABC transporter, substrate-binding component
           [Methanobrevibacter smithii ATCC 35061]
 gi|148551884|gb|ABQ87012.1| polar amino acid ABC transporter, substrate-binding component
           [Methanobrevibacter smithii ATCC 35061]
          Length = 273

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 14/246 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     L  G +     +     NG++ GFD+D  + +      +   +   P++   + 
Sbjct: 35  VNDDKTLVVGFDAEFPPYGYKDDNGEYVGFDLDVAQEVCDR---NNWTLVKQPIDWDAKD 91

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L S  ID +          +      +    + + Q  ++    GI S+S L G ++ 
Sbjct: 92  SELNSGSIDCIWNGFTMNGRED---QYTWSDPYFDNKQVIVVKNGSGIDSLSDLKGKNVE 148

Query: 150 VQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            Q  ++    L  D     +   + +             +  CDA   DI   +    + 
Sbjct: 149 TQKDSSALAALQGDQKALADTFGNLVEVADYNTAFMDLESGACDAIAVDIGVAHYQINSK 208

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           D   + VIL D IS    A     G+TE  + V  T   M            I++++   
Sbjct: 209 DNDGDFVILNDNISSEQYAIGFKNGNTELRDQVQSTLDEMF-------KDGTIDKIADKY 261

Query: 269 TNPDVQ 274
           ++ D++
Sbjct: 262 SDYDIK 267


>gi|222445100|ref|ZP_03607615.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350332|ref|ZP_05975749.1| bacterial extracellular solute-binding protein, family 3
           [Methanobrevibacter smithii DSM 2374]
 gi|222434665|gb|EEE41830.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861116|gb|EFC93414.1| bacterial extracellular solute-binding protein, family 3
           [Methanobrevibacter smithii DSM 2374]
          Length = 273

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 14/246 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     L  G +     +     NG++ GFD+D  + +      +   +   P++   + 
Sbjct: 35  VNDDKTLVVGFDAEFPPYGYKDDNGEYVGFDLDVAQEVCDR---NNWTLVKQPIDWDAKD 91

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L S  ID +          +      +    + + Q  ++    GI S+S L G ++ 
Sbjct: 92  SELNSGSIDCIWNGFTMNGRED---QYTWSDPYFDNKQVIVVKNGSGIDSLSDLKGKNVE 148

Query: 150 VQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            Q  ++    L  D     +   + +             +  CDA   DI   +    + 
Sbjct: 149 TQKDSSALAALQGDQKALADTFGNLVEVADYNTAFMDLESGACDAIAVDIGVAHYQINSK 208

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           D   + VIL D IS    A     G+TE  + V  T   M            I++++   
Sbjct: 209 DNGGDFVILNDNISSEQYAIGFKNGNTELRDQVQSTLDEMF-------KDGTIDKIADKY 261

Query: 269 TNPDVQ 274
           ++ D++
Sbjct: 262 SDYDIK 267


>gi|222081147|ref|YP_002540510.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725826|gb|ACM28915.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 267

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 92/253 (36%), Gaps = 10/253 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    ++  +      +   +A+ L DI  RG ++ G+ TG      V   G+  G+DVD
Sbjct: 8   RGIMAAVGIVATGLLATTQAHATTLNDIVSRGKVRIGVLTGAPPMGMVDEKGNPAGYDVD 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++         ++ +PL    R  ALQ+ ++D L      T  R  +  + F    
Sbjct: 68  VANLIA---GYLSLPVELVPLTPPSRIPALQTGKVDFLVATLAPTGERAKT--VMFTQPY 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                  I    +  + +S L G  + V  G++ E  L    KA       +V+E     
Sbjct: 123 SAFNMDIISGPDQKFTQLSDLQGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTS 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  A + DA    + +     +   RP   + +     +   + A    D E    ++
Sbjct: 180 AQALIAGQTDA--AAVPSTVGEAIIKQRPDAGLQVGFTFFQQGNSMATKIDDFELRQWLN 237

Query: 243 WTHYAMVTAEELG 255
              Y M  + +L 
Sbjct: 238 TAIYLMKVSGDLD 250


>gi|210620907|ref|ZP_03292324.1| hypothetical protein CLOHIR_00267 [Clostridium hiranonis DSM 13275]
 gi|210155119|gb|EEA86125.1| hypothetical protein CLOHIR_00267 [Clostridium hiranonis DSM 13275]
          Length = 259

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 87/248 (35%), Gaps = 8/248 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++    +      T  S          +  G +   V    +  +G+  GFD
Sbjct: 1   MKKLLRKVMVVFAAMVMVLGMTACSSKDSGSADNKVIVGFDNTFVPMGFLDEDGNTVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +     +     ++++ P++   +   L S  +D+L      +  R+    +++  
Sbjct: 61  VDLAKETFERLG---MEVEFQPIDWSMKETELNSGNVDVLWNGYSLSQERKKI--VSYSD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178
               + Q  +      I+  + L+G  +  Q  +T +  +     F +      P++++ 
Sbjct: 116 PYLQNKQIIVTMADSNINKKADLAGKEVGTQQESTAQAAVETDTEFVSSLKGGAPVLYDT 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            ++        R  A  GD   +    ++     ++ +L +         A  + +TE  
Sbjct: 176 YDKALRDLEIGRTSAVAGDEVLIR-YYMSQKGEDKYKVLEENFGLEDYVVAFAKDNTELR 234

Query: 239 NIVSWTHY 246
           + V+ T  
Sbjct: 235 DKVNDTLK 242


>gi|161524852|ref|YP_001579864.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189350398|ref|YP_001946026.1| polar amino acid transporter substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160342281|gb|ABX15367.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189334420|dbj|BAG43490.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 264

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F    A G+  
Sbjct: 1   MKFALLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNAQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFQKAIDDAMT 239


>gi|289522553|ref|ZP_06439407.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504389|gb|EFD25553.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 257

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 20/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   +  + LF +    +A              G + G   F  ++  G   GFD
Sbjct: 14  MKKCLFYLSVIALALFVSVAPVSAKTY---------VVGTSAGFPPFEYIQE-GKIVGFD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ +   +   +++  ++       L +  IDI++     T  R     + F  
Sbjct: 64  VDLMKAIAESQGFE---VEFQDISFDSLIPGLNAGTIDIVAAGMTITEERAKV--VDFTE 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             Y   Q  ++ +  G +        +I VQ GTT +L + +  +   +       F+  
Sbjct: 119 PYYSANQALLVKEGSGNTLTVLFGNHNIAVQTGTTGDLWVEENLEKTGILTGKVTRFDTF 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                       D    D     A +   ++P   V++ +II+      A+ +G+ E   
Sbjct: 179 VLAIQDLINGNVDGVVLDTP--VAKRYAAEKPV--VMVAEIITGEQYGLAVAKGNKELLE 234

Query: 240 IVSWTHYAMVTAEELG 255
            ++     + T+ ++ 
Sbjct: 235 KLNKGLEEVKTSGKMD 250


>gi|329911826|ref|ZP_08275610.1| putative amino acid ABC transporter, periplasmic-binding protein
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545794|gb|EGF30921.1| putative amino acid ABC transporter, periplasmic-binding protein
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 268

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 15/251 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61
           K     +  L+       +  A +L  ++ RG LK G+      F           GF++
Sbjct: 7   KKLAGLMTALLFSGLVVPAHAADLLATVQARGTLKVGVEGTYPPFNFRDTTTRALSGFEI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R L++ +   P    +  +        L + + D++      T  RE      F   
Sbjct: 67  DVARLLAAKMGLKPE---FTTIEWSGILAGLSAGKYDVILNQVGITPQREA--SFDFSDP 121

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   I+ K +    +S+  L G  + V  GT  E                  +   
Sbjct: 122 YTRSSAQLIVRKNEQRQFTSLDDLKGKKLGVGQGTNYEERAKAVA-----GVDVKSYPGA 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   + S + +  L    P        I   + +    ++G+ ++  
Sbjct: 177 PEYLQDLAAGRVDA-ALNDSLMVSYLLKAS-PLPIKAGAPIGEVAQMGIPFVKGNPQFKA 234

Query: 240 IVSWTHYAMVT 250
            ++    A++ 
Sbjct: 235 ALNTALAAIIA 245


>gi|70733754|ref|YP_257394.1| cystine transporter subunit [Pseudomonas fluorescens Pf-5]
 gi|68348053|gb|AAY95659.1| cystine ABC transporter, periplasmic cystine binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 265

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 89/261 (34%), Gaps = 20/261 (7%)

Query: 2   YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            ++  +  L L +       +     L  IK  G +  G+      F+ V  NG   GF+
Sbjct: 7   RRNLLIGTLGLALGAGLMGQAVAGEQLQKIKDAGVINVGLEGTYPPFSYVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL++ +      ++  P        AL+SK++D +      +  R+      F  
Sbjct: 67  VEFSEALANKLGVK---VKLQPTKWDGILAALESKRLDAVVNQVTISEERKK--KYDFSI 121

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                G   +  KK      + + L G  + V  GT  E  L D    +        ++ 
Sbjct: 122 PYTVSGIQALTQKKDEGKFKTAADLGGHKVGVGLGTNYEQWLKD----NVPTAIIKTYDD 177

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                   R  R +A   D   L A +L        V+  +  S+     A+ +G+ E  
Sbjct: 178 DPTKYQDLRVGRIEAILVDR--LAAFELIKKTKDTLVVSGEPFSRQEAGVALRKGEPELL 235

Query: 239 NIVSWTHYAMVTAEELGITQK 259
             V+         EEL     
Sbjct: 236 AAVNKAI------EELRADGT 250


>gi|78355233|ref|YP_386682.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217638|gb|ABB36987.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 251

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 86/260 (33%), Gaps = 22/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F +    L +    + +  A           L  GI+     FA V  +G   GFD
Sbjct: 1   MLRKFTIMAAVLALSLAFAGTAFAG--------KTLINGIDANYPPFAYVDKDGKPAGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +++ +      +++ P+       +L SK+ID++      T  R     ++F  
Sbjct: 53  VDAMEWIAAKMG---FTVKHKPMEWSTIVQSLVSKKIDMVCSGMSITEERAR--QVSFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFER 178
             +   Q FI  K  G++     +G         T+E    D  K +     Y    ++ 
Sbjct: 108 PYWTVAQVFIAKKGSGLTVEQVFTGGKKLGVQSGTSEADWLDKEKPNKPEWNYTVRFYDS 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      R DA   D     A      +P E  ++           A+ + D E  
Sbjct: 168 APLAIEDVINGRIDAAAMD--IAPAQDAQRVKPIE--VVGSFTDPEYFGIAVRKEDKELL 223

Query: 239 NIVSW---THYAMVTAEELG 255
             ++       A    EEL 
Sbjct: 224 ETINKGLALLKADPYWEELK 243


>gi|289627074|ref|ZP_06460028.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289646271|ref|ZP_06477614.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298486960|ref|ZP_07005013.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298158522|gb|EFH99589.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866809|gb|EGH01518.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 277

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M     +  L L  L  +    +A  L D+  +  L CG+   +  F+       +  G 
Sbjct: 1   MRMKSLLVALALSPLAVSV--AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGM 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+AL+  +  +   ++  PL+ + R   ++  ++D++  N  +T  R  +  + F 
Sbjct: 59  DVDLCKALAKHMGVE---LELKPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  ++         S   G  I    G+T+E ++            P+ F+  
Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A + ++      +      L         E  I  + ++  P+   + QG+  + 
Sbjct: 168 GSAYMALQQNKVVGLVTNTMTAIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFL 227

Query: 239 NIVSWTHYAMVTAEELG 255
             V+ +  AM  A E+ 
Sbjct: 228 AKVNESLRAMEAAGEID 244


>gi|297565168|ref|YP_003684140.1| family 3 extracellular solute-binding protein [Meiothermus silvanus
           DSM 9946]
 gi|296849617|gb|ADH62632.1| extracellular solute-binding protein family 3 [Meiothermus silvanus
           DSM 9946]
          Length = 247

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 85/265 (32%), Gaps = 22/265 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  ++L L+ L   S +   S L   K  G L  G +     F  +  +    GFD
Sbjct: 1   MRKWF--AVLALVGLLGASSTLAQSCLASAKANG-LTVGTSPDYPPFESLDKDNKIIGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +     K+  +  +      AL SK+ID+++     T  R+    + F  
Sbjct: 58  VDLINAIAGELG---LKVSVIGQSFDGLIPALLSKKIDVIAAGLTITEERKK--SVDFTR 112

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K+  GIS +  L+G  + VQ G+  E   +    A         +   
Sbjct: 113 PYISGPNVIITRKETSGISKLEDLAGKKVAVQIGSAQEKIASGVKGA-----QVKSYNLY 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A    + DA         A             L  + +      A+ +   +   
Sbjct: 168 TDAALAVNTRQADALIVHRFVGRAFLKQYPDLKIVAELNQVDT----GLALRKDCGDL-- 221

Query: 240 IVSWTHYAMVTAEELGITQKNINQV 264
                  A +   E       +   
Sbjct: 222 --RQAIDAAIEKLEQNGKMDELAAK 244


>gi|312883550|ref|ZP_07743275.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368773|gb|EFP96300.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 256

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 88/260 (33%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    +   + +         K    ++ GI      F+  +A+G  KGFD
Sbjct: 1   MKKWLLAAVLTATAVSGVTQA---------KNWKTVRFGIEGAYPPFSWTEADGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     K + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCNEM---QVKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   FI  K  GI   + L G  I VQ  TT +  L D +     K   + +   +
Sbjct: 107 KYALIPNKFIAKKGAGI-DFNNLDGQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFD 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235
           E        R  A  GD SAL    L       +  +   ++           A+ + D 
Sbjct: 163 EAYLDLANGRVVAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDK 222

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++    ++    E  
Sbjct: 223 ALTEKLNAAIKSLRAKGEYQ 242


>gi|71737113|ref|YP_274662.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71557666|gb|AAZ36877.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 277

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M     +  L L  L  +    +A  L D+  +  L CG+   +  F+       +  G 
Sbjct: 1   MRMKSLLVALALSPLAVSF--AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGM 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+AL+  +  +   ++  PL+ + R   ++  ++D++  N  +T  R  +  + F 
Sbjct: 59  DVDLCKALAKHMGVE---LELKPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  ++         S   G  I    G+T+E ++            P+ F+  
Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A + ++      +      L         E  I  + ++  P+   + QG+  + 
Sbjct: 168 GSAYMALQQNKVVGLVTNTMTAIKLVGQAKTSGVELAIAKEPMALEPIGAGMRQGEPAFL 227

Query: 239 NIVSWTHYAMVTAEELG 255
             V+ +  AM  A E+ 
Sbjct: 228 AKVNESLRAMEAAGEID 244


>gi|284009203|emb|CBA76274.1| amino acid ABC transporter, substrate-binding protein [Arsenophonus
           nasoniae]
          Length = 274

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 90/248 (36%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M  +   ++L + +   T     A  L  IKK G ++  +      F  + A      G+
Sbjct: 1   MKSNLITTLLSVALALVTGL-AKADKLESIKKSGVIRIAVFDSNPPFGFIDAKTKKLVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+++        +   P N   R   L   ++D++  N   T  R     + F 
Sbjct: 60  DIDIAEAIANDFGVK---LVLRPTNPANRIPLLTGGKVDLIGANFTITNERAK--QVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI      + +   +    I    GT  E+TL + +         I ++  
Sbjct: 115 IPDFATGQKFIAR-IGVLKTPDDIIPLRIGADKGTVQEITLRERYP----NTKVISYDDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237
               AA R     A T D + L  L          ++ I P  +++   A A  +G+T  
Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLPAKIKADYEISPFSLTREYQALAAAKGETNL 229

Query: 238 YNIVSWTH 245
            N V+ T 
Sbjct: 230 INAVNNTL 237


>gi|134295624|ref|YP_001119359.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134138781|gb|ABO54524.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 264

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L ++K+RG L+ G+      F      G+  
Sbjct: 1   MKISLLKKLLVAGLVGTSFAAATAHAADLLDEVKQRGTLRVGLEGTFPPFNSKSPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +        ++          LQ+ + D+++     T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFQKAIDDAMT 239


>gi|260772505|ref|ZP_05881421.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           metschnikovii CIP 69.14]
 gi|260611644|gb|EEX36847.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           metschnikovii CIP 69.14]
          Length = 258

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 85/251 (33%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L   + +         K+   ++ GI      F+  +A+G  +GFD
Sbjct: 1   MKKWLLIVAIAASALSGIAQA---------KEWKTVRFGIEGAYPPFSWTEADGSLRGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     +   +P +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCAEM---QVECVIIPQDWDGIIPSLLARRYDAIIAAMSITEERKK--RVDFTK 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K   +  +   L G  I VQ  TT +  L D +       + + +   
Sbjct: 107 KYAQIPNRFIAKKDANLDFTPEGLKGVRIGVQRATTHDKYLTDNY---GRSVNIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           ++        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 164 DDAYLDLANGRIAAVLGDASALEEGMLNRPGGDGYEFVGPSLTDPKWFGEGMGIAVRKQD 223

Query: 235 TEWYNIVSWTH 245
                 ++   
Sbjct: 224 KALTEQLNRAI 234


>gi|85707349|ref|ZP_01038432.1| putative ABC transporter periplasmic amino acid-binding protein
           [Roseovarius sp. 217]
 gi|85668157|gb|EAQ23035.1| putative ABC transporter periplasmic amino acid-binding protein
           [Roseovarius sp. 217]
          Length = 268

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 89/255 (34%), Gaps = 8/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I  L+ +   + +  A  L DI   G L+C +            +    GFD
Sbjct: 1   MKK--MTLIAALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPPMGMRDESNVPIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L++A+  +   ++       ER  AL S ++D+   +T  TL R  ++G  F  
Sbjct: 59  VDYCNDLAAALGVEAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVG--FSV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +        +   GISS   + G ++   AGT   + L    K          ++   
Sbjct: 114 PYFAFEMAVTANNATGISSYEGMKGFTVGAVAGTYEAIALEAQVKEWGEG-EFRPYQTQA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + DA     +   A   + +     V+         +A    + +  + N 
Sbjct: 173 DVFLALSQGQLDATVSTSTVAQANVQSGNFGDISVVGFAPFDTDYVALFAKRDEYGFLNY 232

Query: 241 VSWTHYAMVTAEELG 255
           +       V      
Sbjct: 233 LDLFVNQQVRTGRYD 247


>gi|16262494|ref|NP_435287.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
 gi|14523099|gb|AAK64699.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
          Length = 271

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 11/243 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   +S+L   I+        A  +  IK  G +K G+      F  + AN    G+D D
Sbjct: 11  RRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDAD 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + L+  +  +   +  +P+    R   LQS Q+D+L  +   T  R     + F    
Sbjct: 71  VAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAK--NVDFSQPY 125

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G        ++    L+G +I V   +T +              +   F+     
Sbjct: 126 AGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ---DANIQRFDDDASA 182

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + + +           ++          +    +S+     A+ +G +E    V+
Sbjct: 183 VQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKL---QLSQQVQGIAVRKGSSEMLKFVN 239

Query: 243 WTH 245
              
Sbjct: 240 GFL 242


>gi|298485133|ref|ZP_07003229.1| Cystine-binding periplasmic protein precursor [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160385|gb|EFI01410.1| Cystine-binding periplasmic protein precursor [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330886121|gb|EGH20022.1| cystine transporter subunit [Pseudomonas syringae pv. mori str.
           301020]
          Length = 265

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSALSLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I +   L+G  + V  GT  E  L    K +        ++   
Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D  A   +          V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|241663660|ref|YP_002982020.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240865687|gb|ACS63348.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 281

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 12/232 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             + DIKK+G L CG+      F+ +K   + +  G+DVD C A++ ++   P       
Sbjct: 29  DQVSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKP---VLKQ 85

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L    R   LQ  ++D+L+ +      RE    + F   T+  GQ  ++ K  GI+S++Q
Sbjct: 86  LAVAARLPELQQGRVDLLAASLTHNKEREA--QIDFSVSTFITGQKAMVKKSSGITSLAQ 143

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  +    G+T E  +A   K        + F+   +   A +  +  AY  D + L 
Sbjct: 144 LDGKKLLTVKGSTMEANIAKTIK----NADVVSFDNSPQALLALQQGKGVAYVNDETTLI 199

Query: 203 ALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                      ++ +LP  +S   LA  I +G+  +   V      M  + E
Sbjct: 200 GNMAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGMEKSGE 251


>gi|187929541|ref|YP_001900028.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|309781684|ref|ZP_07676417.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
 gi|187726431|gb|ACD27596.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
 gi|308919325|gb|EFP64989.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 281

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 12/232 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             + DIKK+G L CG+      F+ +K   + +  G+DVD C A++ ++   P       
Sbjct: 29  DQVSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKP---VLKQ 85

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L    R   LQ  ++D+L+ +      RE    + F   T+  GQ  ++ K  GI+S++Q
Sbjct: 86  LAVAARLPELQQGRVDLLAASLTHNKEREA--QIDFSVSTFITGQKAMVKKSSGITSLAQ 143

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  +    G+T E  +A   K        + F+   +   A +  +  AY  D + L 
Sbjct: 144 LDGKKLLTVKGSTMEANIAKTIK----NADVVSFDNSPQALLALQQGKGVAYVNDETTLI 199

Query: 203 ALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                      ++ +LP  +S   LA  I +G+  +   V      M  + E
Sbjct: 200 GNMAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGMEKSGE 251


>gi|307728863|ref|YP_003906087.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307583398|gb|ADN56796.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 267

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 89/244 (36%), Gaps = 11/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +    S+L   IL  T+ + +A  L +I K G LK  +      F  V  +   +G+D+
Sbjct: 10  RRTLLASLLVSSILAITAHAAHADTLDNIVKAGVLKVAVPEDYPPFGSVGPDMKPQGYDI 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L+ ++     K++ +P+N+  R   LQ+ ++D++  +   T  RE    + F   
Sbjct: 70  DTAALLAKSM---NVKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKV--IDFSTA 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                QG        +S  + L+G ++    G   E+ L+              FE    
Sbjct: 125 YAPYYQGVFGPADIKVSGPADLTGKTVGATRGALEEIGLSQMAP----NATIKRFEDNNA 180

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA+ + +            A+      P        +I  SP    + + +      V
Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238

Query: 242 SWTH 245
           +   
Sbjct: 239 NAAI 242


>gi|207723710|ref|YP_002254108.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           MolK2]
 gi|206588914|emb|CAQ35876.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           MolK2]
          Length = 284

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 12/233 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           A  L DIKK+G L CG+      F+ +K   + +  G+DVD C A++ ++   P      
Sbjct: 31  ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKP---VLK 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            L    R   LQ  ++D+L+ +      RE    + F   T+  GQ  ++ K  GI++++
Sbjct: 88  QLAVAARIPELQQGRVDLLAASLTHNKERET--QIDFSVSTFITGQKAMVRKDSGITTLA 145

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL G  +    G+T E  +    K        + F+   +   A +  +  AY  D + L
Sbjct: 146 QLDGKKVLTVKGSTMEANIGHAIK----NADIVSFDNSPQALLALQQGKGAAYVNDETTL 201

Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                       ++ I+P  +S    A  I + +  +   V+     M  + +
Sbjct: 202 IGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGMEASGD 254


>gi|83746551|ref|ZP_00943602.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551]
 gi|207743861|ref|YP_002260253.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
 gi|83726882|gb|EAP74009.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551]
 gi|206595261|emb|CAQ62188.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
          Length = 284

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 12/233 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           A  L DIKK+G L CG+      F+ +K   + +  G+DVD C A++ ++   P      
Sbjct: 31  ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKP---VLK 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            L    R   LQ  ++D+L+ +      RE    + F   T+  GQ  ++ K  GI++++
Sbjct: 88  QLAVAARIPELQQGRVDLLAASLTHNKERET--QIDFSVSTFITGQKAMVRKDSGITTLA 145

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL G  +    G+T E  +    K        + F+   +   A +  +  AY  D + L
Sbjct: 146 QLDGKKVLTVKGSTMEANIGHAIK----NADIVSFDNSPQALLALQQGKGAAYVNDETTL 201

Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                       ++ I+P  +S    A  I + +  +   V+     M  + +
Sbjct: 202 IGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGMEASGD 254


>gi|298294202|ref|YP_003696141.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296930713|gb|ADH91522.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 260

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 89/255 (34%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +    ++    +    A  L DI  R  ++  + T    F  V A+   +G D
Sbjct: 1   MTTRILFAAAIGLMATLGAVPAVADALDDIIARKTIRVAVPTDYPPFGSVGADMQPRGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +      ++ +P+ A  R   LQS + D+   +   T  R     + F  
Sbjct: 61  IDVANLIGEKLGVK---VELVPVTAPNRVAFLQSGKTDLTISSLGKTEERAKV--IDFSI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                       K+  +   + LSG  I V  G+  +  LAD             FE   
Sbjct: 116 AYSPFFDAIFGKKEPPVKEYADLSGKKISVTRGSMQDKELADLAPKA----VVQRFEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              AA+ + + + +        A+K     P   + L  +++ SP    +++G+T   + 
Sbjct: 172 STIAAFMSGQVEMFASGTPVAAAIKRR--NPDLDLELKIVLANSPCYVGVVKGETRLLDK 229

Query: 241 VSWTHYAMVTAEELG 255
           V+          E+ 
Sbjct: 230 VNEIIREAKAKGEID 244


>gi|91783382|ref|YP_558588.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91687336|gb|ABE30536.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 274

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 10/255 (3%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K  +  +L +  L F+  S   +A  L   K RG L  GI    V F  +   G   G
Sbjct: 1   MSKRSWWVVLMMFALGFSWLSAGAHADELQMAKARGKLIVGIRNDYVPFGYLDNKGHEVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + ++  +F   + I+++P+ A  R   L + +ID++         R     + F
Sbjct: 61  FEVDLAKFIAKDMFGSDTAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKV--IDF 118

Query: 119 RPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y   G   +  K   I+    L G  IC   G     TL +   A       ++F 
Sbjct: 119 TDPYYMMAGMVLLAPKNTTITKWEDLKGRKICGSQGNMYNRTLQEKLGA-----DTVLFT 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              ++  A+  +RC+A   D   L           +  I  D     P+   + + +  +
Sbjct: 174 GTAQMYKAFEDNRCEAIAYDGPNLTLKANEPGWKDKDKIALDAFEFVPIVGGVRKNEPAF 233

Query: 238 YNIVSWTHYAMVTAE 252
            N ++ +      A 
Sbjct: 234 LNALNQSIKKAEAAG 248


>gi|227530663|ref|ZP_03960712.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus vaginalis ATCC 49540]
 gi|227349444|gb|EEJ39735.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus vaginalis ATCC 49540]
          Length = 285

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 22/251 (8%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IKKRG L+  +   L  +  V  +G   G+DV+  R ++  +   P   +++ +NA  R 
Sbjct: 46  IKKRGTLRVAVFGDLPPYGWVNKDGKRVGYDVELARRMAKDLGVKP---KFIQVNANNRV 102

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L S + DI+  N   T  R+    + F         G +  KKK I+ VSQL G  + 
Sbjct: 103 DTLNSNKADIVLANFTVTPERKKV--VDFAKPYMKVSVGVVSPKKKAITKVSQLKGKKVI 160

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  GTT E    +YF +       + F+   +   A + +R  A   D S LYA     +
Sbjct: 161 VTKGTTAE----NYFTSKQPGVQLLKFDSKTQQFNALKNNRAAALADDNSYLYAW--VKN 214

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
            P   V +  I  K  ++PA+ +G+    N  +             IT+ N         
Sbjct: 215 NPKYTVGIKSIGPKQYISPAVKKGNKSLLNWSNK-----------EITKLNKEDFFTKDY 263

Query: 270 NPDVQRFLGID 280
           N  ++ + G +
Sbjct: 264 NSQLKPYFGSE 274


>gi|224282754|ref|ZP_03646076.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 284

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 94/265 (35%), Gaps = 17/265 (6%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
               +   +   +        + G ++ GI     G      +G + GFDVD  + ++  
Sbjct: 27  VACAMSLAACGAD--------ESGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYVAKK 77

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +I +    +K+R   LQ+  +D++      T  R+    ++F    +  GQ  +
Sbjct: 78  LGYSEDEIVWKEAPSKQREAMLQNGDVDMILATYSITDERK--NAVSFAGPYFVAGQDLL 135

Query: 131 MHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           + K    I+    L+G  +C   G+T+  T+   F +   +   +      E   A  + 
Sbjct: 136 VRKDDHSINGPEDLNGKRLCSVTGSTSAATVKKKFAS---EVQLMEQPGYAECATALFSG 192

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             DA T D   L  L   +       ++    ++      I +GDT     ++     M+
Sbjct: 193 IVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMI 250

Query: 250 TAEELGITQKNINQVSKDTTNPDVQ 274
                     +  + +  T N +  
Sbjct: 251 KDGSWERAIADNTEGTSYTPNAEYN 275


>gi|123442746|ref|YP_001006723.1| cystine transporter subunit [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089707|emb|CAL12559.1| putative cystine-binding periplasmic protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 266

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +        +L  +K+RG L  G+      F+    +G   GF
Sbjct: 7   RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L+SK+ID+       +  R+      F 
Sbjct: 67  EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      S    L G  + V  G+  E  L +  K          ++
Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----DVDIRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L         +     ++     A+ + + E 
Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLAVAGPAFARQESGVALRKNNPEL 235

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 236 LAAINQAI 243


>gi|330899980|gb|EGH31399.1| cystine transporter subunit [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 265

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  +G   GF+
Sbjct: 7   RRTFLFSAMGLMLGAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +   +  I S   L+G  + V  GT  E    ++ KA+        ++   
Sbjct: 124 TVSGIQALVLKKNEDAIKSAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D   L AL++     ++ V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|186471430|ref|YP_001862748.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184197739|gb|ACC75702.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 277

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 94/262 (35%), Gaps = 22/262 (8%)

Query: 6   FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           F  +  ++ L   +           +   S L  + +RG L+ G       F     +G 
Sbjct: 10  FACLSAVVGLLALAGCTKVATPGQDAATGSTLQAVLQRGTLRVGDCLTFAPFGFYDKSGQ 69

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  + L+  +      ++ +   +  R   LQ+ ++D++  N    L R   + 
Sbjct: 70  PDGYDVDLAKELAKQMGVK---LEMVNTTSANRIPNLQTAKVDVVFCNFTRNLERAKEIA 126

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F        +  ++ K  GI SV  +SG +I    G+T      D  +A  +      
Sbjct: 127 --FTTPYVVASEALLVKKSSGIQSVKDMSGHTIATVKGSTN----GDEVRALGIPVKIQE 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+  E    A +  + DA   D + L         P   V    ++     A  +  GD 
Sbjct: 181 FDSSEAAILAVKQGQADAMIEDNNFLAYQAKL--DPELTVTNEALVPLEYNAFGVKAGDQ 238

Query: 236 EWYNIVSWTHYAMVTAEELGIT 257
            W N ++   +  + A +L   
Sbjct: 239 VWLNYLNLFLF-NINASKLNAQ 259


>gi|254517084|ref|ZP_05129142.1| hypothetical protein NOR53_163 [gamma proteobacterium NOR5-3]
 gi|219674589|gb|EED30957.1| hypothetical protein NOR53_163 [gamma proteobacterium NOR5-3]
          Length = 267

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 15/252 (5%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M+K      S    + L    ++     L  + +   L  G++            G+  G
Sbjct: 1   MFKPVQILASSFLAMSLLLAPWAQAGDTLDRVVENKVLVVGMSGDQPPMNMTNRQGELMG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  +AL++A+  D   ++  P+   +   AL++ +ID++      T  R      +F
Sbjct: 61  FDVDLAKALANAMHAD---LKLSPMPFGDLSKALETGKIDMIVSGMAITAERSR--SASF 115

Query: 119 RPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                  G+  +  +   ++  S     +   +     +T+   + +           + 
Sbjct: 116 VGPYMMSGKSILATRAAIEEIASGGIAATDVKLAALKNSTSASFVLEAAP----NATLVE 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               EE      +        D        L N      V L   ++  P   A+   D 
Sbjct: 172 VANYEEAIEMVTSGAVAGMVADAPVCQLQVLRNPDAG-LVTLDKPLTVEPFGVAVASDDP 230

Query: 236 EWYNIVSWTHYA 247
           ++ N+V     A
Sbjct: 231 QFLNLVRNYLRA 242


>gi|330859510|emb|CBX69853.1| cystine-binding periplasmic protein [Yersinia enterocolitica
           W22703]
          Length = 266

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +        +L  +K+RG L  G+      F+    +G   GF
Sbjct: 7   RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L+SK+ID+       +  R+      F 
Sbjct: 67  EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      S    L G  + V  G+  E  L +  K          ++
Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L         +     ++     A+ + + E 
Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPEL 235

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 236 LAAINQAI 243


>gi|241113597|ref|YP_002973432.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861805|gb|ACS59471.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 261

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 94/283 (33%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F +I  L   F    ++ A  L DI  RG L+  +      F  V  +    G+D+D
Sbjct: 4   RRVFFAIATLAATFGFGSASYADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      +    + +  R   LQ+ ++D++  +      RE    + F    
Sbjct: 64  VANLIAEKLGVKTELVP---VTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFTTAY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G        I+ V  L+G SI V  G   +L L     A         +E     
Sbjct: 119 APFFNGVFAPADVSIAKVEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A+ + + D          A+      P +   +  +I  SP    + +  T     V+
Sbjct: 176 ISAFLSGQVDTIATGNVVAAAILA--KNPPKRPEMKFLIKNSPCYIGLNKEQTALLEKVN 233

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
               A  T   L                   Q++LG D  S++
Sbjct: 234 GIIAAAKTDGALNAIS---------------QKWLGADLPSDL 261


>gi|71737270|ref|YP_272645.1| cystine transporter subunit [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71557823|gb|AAZ37034.1| cystine ABC transporter, periplasmic cystine binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320322114|gb|EFW78210.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330786|gb|EFW86760.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330872001|gb|EGH06150.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 265

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 85/265 (32%), Gaps = 13/265 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I +   L+G  + V  GT  E  L    K +        ++   
Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D  A   +          V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237

Query: 241 VSWTHY---AMVTAEELGITQKNIN 262
           +        A  T E+L     N +
Sbjct: 238 IDKAIDKLRANGTLEKLSKKYFNAD 262


>gi|288922652|ref|ZP_06416828.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f]
 gi|288346010|gb|EFC80363.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f]
          Length = 323

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 9/226 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            S +  ++  G +  G       F      G  +GFDV+  + +++A+     K++++  
Sbjct: 74  GSTMAKLQSGGTITVGTKFDQPLFGLKNLRGVPEGFDVEIAKIITNALGIPADKVKFVET 133

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQ 142
            +  R   +Q  ++D++         R+    + F    Y  GQ  ++   +  I+    
Sbjct: 134 VSVNREPFIQQHKVDMVVATYTINDKRK--QVVDFAGPYYVAGQTLMVRAGESAITGKDS 191

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+G ++C  +G+T    +             ++F+   +   A +  + DA T D + L 
Sbjct: 192 LAGKNVCSVSGSTPAERIRTEAPQAK----LVLFDVYSKCAEALKNGQVDAVTTDNAILL 247

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            L   +  P    ++    S  P    I +GD E+   ++ T  A 
Sbjct: 248 GL--MDSDPGTFKLVGKPFSTEPYGIGIAKGDDEFRTFINETLTAA 291


>gi|313139914|ref|ZP_07802107.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium bifidum NCIMB 41171]
 gi|313132424|gb|EFR50041.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 279

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 94/265 (35%), Gaps = 17/265 (6%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
               +   +   +        + G ++ GI     G      +G + GFDVD  + ++  
Sbjct: 22  VACAMSLAACGAD--------ESGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYVAKK 72

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +I +    +K+R   LQ+  +D++      T  R+    ++F    +  GQ  +
Sbjct: 73  LGYSEDEIVWKEAPSKQREAMLQNGDVDMILATYSITDERK--NAVSFAGPYFVAGQDLL 130

Query: 131 MHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           + K    I+    L+G  +C   G+T+  T+   F +   +   +      E   A  + 
Sbjct: 131 VRKDDHSINGPEDLNGKRLCSVTGSTSAATVKKKFAS---EVQLMEQPGYAECATALFSG 187

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             DA T D   L  L   +       ++    ++      I +GDT     ++     M+
Sbjct: 188 IVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMI 245

Query: 250 TAEELGITQKNINQVSKDTTNPDVQ 274
                     +  + +  T N +  
Sbjct: 246 KDGSWERAIADNTEGTSYTPNAEYN 270


>gi|283455613|ref|YP_003360177.1| glutamine-binding protein glnH [Bifidobacterium dentium Bd1]
 gi|283102247|gb|ADB09353.1| glnH Glutamine-binding protein glnH [Bifidobacterium dentium Bd1]
          Length = 276

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +IKK G LK  + +    F  V  +G++ G+DV F   L+  +        Y  ++ 
Sbjct: 30  TLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSVDP 86

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R   L S ++D+   N   T  R+    + F         G +  +   I+ VSQL G
Sbjct: 87  AARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQLKG 144

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ V  GTT E      F+ +        +++  +   A    R DA++ D + + A  
Sbjct: 145 KTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 200

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                    V +  +  +  +APA+ +G+ E  + ++ 
Sbjct: 201 --KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 236


>gi|257481900|ref|ZP_05635941.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331009533|gb|EGH89589.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 265

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I +   L+G  + V  GT  E  L    K +        ++   
Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D  A   +          V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|15600269|ref|NP_253763.1| binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|116053223|ref|YP_793545.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|218894175|ref|YP_002443044.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254238217|ref|ZP_04931540.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719]
 gi|254244042|ref|ZP_04937364.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192]
 gi|313110115|ref|ZP_07796017.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
 gi|9951369|gb|AAG08461.1|AE004920_11 probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|115588444|gb|ABJ14459.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170148|gb|EAZ55659.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719]
 gi|126197420|gb|EAZ61483.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192]
 gi|218774403|emb|CAW30220.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|310882519|gb|EFQ41113.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
          Length = 266

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L +  L   +    A  + D  KRG L+ G++   + F      G   GF+
Sbjct: 1   MKKYLASLVLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      ++ +  +      AL + + D++      T  R  +L L F  
Sbjct: 61  VDLLKAMAKSMGVK---LELVSTSYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 F
Sbjct: 116 PFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKYHG----F 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E        + DA+  D                 V L    +  PLA  + +GD +
Sbjct: 172 DNEPEAVMDVVNGKADAFIYDSPYNVVAVSKFGAGK-LVYLDQPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|315647912|ref|ZP_07901013.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
 gi|315276558|gb|EFU39901.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
          Length = 255

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 91/248 (36%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L   +L  T    ++S  G       L  GI+           + +  GFD
Sbjct: 1   MKK--IASVLAGFMLLLTVVGCSSSSGGG----NELVVGIDDKFAPMGFRDESNEIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+ RA +  +  +   +++ P++ K +   L S +ID++      T  R+    + F  
Sbjct: 55  IDYARAAAEKMGKE---VKFQPIDWKAKESELSSGRIDLIWNGYTITDERKE--KVLFTK 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               + Q   +     ISS+  L+G  I +Q+ ++    L+   + H        F    
Sbjct: 110 PYLENSQVVAVLSDSAISSIQDLAGKQIGLQSLSSAADALSAN-EIHAQVEKISEFPDNV 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +  +  R DA   D   +       +    + IL + ++       + +G+ E    
Sbjct: 169 LALSDLKNGRVDAVVIDEVVMKYYMSKEE--GTYKILEESLAPEQYGIGVKKGNEELLES 226

Query: 241 VSWTHYAM 248
           +      M
Sbjct: 227 LQKALDEM 234


>gi|289673926|ref|ZP_06494816.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae FF5]
 gi|330971240|gb|EGH71306.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 264

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 4/241 (1%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
           +L  T  +   S L  + KRG L  G  +    +    A+G  +GFD+D  R ++  +F+
Sbjct: 1   MLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    Y +G   ++  
Sbjct: 61  DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPA 118

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 +  L  A   V       +   +       K     ++ V+ +  A  + R D 
Sbjct: 119 NSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADT 178

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              D S+     L    P  +       S    A A+ +GD +W N V+   +  +T  E
Sbjct: 179 AATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 236

Query: 254 L 254
            
Sbjct: 237 F 237


>gi|163802098|ref|ZP_02195994.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
 gi|159174239|gb|EDP59047.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
          Length = 256

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 86/250 (34%), Gaps = 23/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L   ++     +   S          ++ GI      F++ + +G   GFD
Sbjct: 1   MKKWLFAATLAAAVVSGAVQAKEWST---------VRFGIEGAYPPFSQTEPDGSLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +  +    + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCAEMKVE---CEIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--RVDFTG 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   +I  K   +   + L G  I VQ  TT +  L D +     K   + +   +
Sbjct: 107 KYALIPNKYIAKKGANL-DFNNLDGQKIAVQRATTHDKFLTDNY---GDKVEIVRYGSFD 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235
           E      + R  A  GD SAL A  L  +    +  +   ++           A+ + D 
Sbjct: 163 EAYLDLASGRVAAVLGDASALEAGVLNKEGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDK 222

Query: 236 EWYNIVSWTH 245
           +    +    
Sbjct: 223 DLTKKLDAAI 232


>gi|302669343|ref|YP_003832493.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio
           proteoclasticus B316]
 gi|302397007|gb|ADL35911.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio
           proteoclasticus B316]
          Length = 255

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 86/252 (34%), Gaps = 21/252 (8%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        S+L +  L     +  A         G L  G N     F  V  +G+ 
Sbjct: 1   MKKKIISVVLASLLTVASLAGCGSAAKADTNNT---NGTLVVGTNAAFPPFEYVGDDGEP 57

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+   +A+   I  D   +Q   +       ++ S +ID+       T  R+ +  +
Sbjct: 58  DGFDMALIKAVGEKIGMD---VQIQDMEFDSLVSSIGS-KIDVAIAGMTVTEERQKT--V 111

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y   Q  I+ K   I++   L   +I VQ GTT E  +AD  +      +   +
Sbjct: 112 DFSESYYEAVQAVIVPKDSAIANADDLKNLTIGVQLGTTGE-FIADEIE----GVNVSAY 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGD 234
            +  +        R D    D +               +   D     P   A A+ +G+
Sbjct: 167 NKAVDAVNDLINGRLDCVIVDKNPAEVFGTQYSDKVNVLPGTD-FDFEPEFYAIALPKGN 225

Query: 235 TEWYNIVSWTHY 246
           TE  N ++    
Sbjct: 226 TELANKINTAIQ 237


>gi|257888302|ref|ZP_05667955.1| extracellular solute-binding protein [Enterococcus faecium
           1,141,733]
 gi|257824356|gb|EEV51288.1| extracellular solute-binding protein [Enterococcus faecium
           1,141,733]
          Length = 271

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 8/237 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +A     I +   +  G++   V       +G   GFD+D  +A+          + + 
Sbjct: 25  ASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---ITVDFQ 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P++   +   L +  ID++      T  RE    + F      + Q  I  K+ GI+S  
Sbjct: 82  PIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQFTKPYMENDQVLITPKESGITSFE 139

Query: 142 QLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           Q+    +  Q G++         +  K        ++++   E     ++ R D    D 
Sbjct: 140 QMKNKRLGAQNGSSGYDVFTKQPEVLKERVKNQDAVLYDSFNEALIDLKSGRIDGLLMDK 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                     +   +  +          A  + + D      ++     +    E  
Sbjct: 200 VYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTLVKKINEAFDRLEKTGEFQ 256


>gi|302186282|ref|ZP_07262955.1| cystine transporter subunit [Pseudomonas syringae pv. syringae 642]
          Length = 265

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 87/245 (35%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK+ G L  G+      F+ V  +G   GF+
Sbjct: 7   RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKESGTLNVGLEGTYPPFSFVDESGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +   +  I +   L+G  + V  GT  E    ++ KA+        ++   
Sbjct: 124 TVSGIQALVLKKNEDAIKTAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R DA   D   L AL++     ++ V   D  S+     A+ +G+ E    
Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|224823796|ref|ZP_03696905.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224604251|gb|EEG10425.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 259

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 80/250 (32%), Gaps = 18/250 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I  L ++  TS +  A +L  +++RG LK  +      F     +    GF+
Sbjct: 1   MKK----LIALLALIGATSHAFAADLLDTVQQRGTLKIALEGTYPPFNFKDKDQKLAGFE 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL+  +   P    +           LQ  + D++      T  R+      F  
Sbjct: 57  VDLGTALAQKLKVKPE---FTTGEWSGLLAGLQGGKFDVVMNQVSITDKRKEV--FDFSQ 111

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    I+ K +     S+  L G  + V    T     AD  KA         +  
Sbjct: 112 PYTISSAQLIVRKNEKRVFKSLDDLKGLKMGV----TQGSNYADMVKAQG-GIESKFYPS 166

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             EI     + R DA   D   +         P +        ++  +     +G+ ++ 
Sbjct: 167 AAEIFQDLASGRIDAAINDSLLIPFAIKEAKLPLKAGAAVGTTTQ--MGIPFAKGNPKFK 224

Query: 239 NIVSWTHYAM 248
             +     ++
Sbjct: 225 AAIDGALTSL 234


>gi|303228616|ref|ZP_07315442.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516708|gb|EFL58624.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 270

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 10/246 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  + ++ F S   + +   D +    +  G++            G+  G D+
Sbjct: 4   KKIMAVGLAAVSMMAFVSGCGSDTKKADTQLPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +     D   +++  ++   +   L+SK+ID+L      +  RE    + F   
Sbjct: 64  DLAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDVLWNGLTVSPEREK--NILFSDT 118

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              D Q  ++      I   S L+G  + VQ  +T E  L +   +         +    
Sbjct: 119 YMKDKQYIVVRNDDNAIKGKSDLAGKVVGVQQASTGESALQND-PSGKTVKEIKSYADFV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239
                    R DA   D     A  L    P ++ I+          A    + DT   +
Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235

Query: 240 IVSWTH 245
            ++   
Sbjct: 236 KINSIL 241


>gi|224371640|ref|YP_002605804.1| putative ABC-type amino acid transport-system, periplasmatic
           component [Desulfobacterium autotrophicum HRM2]
 gi|223694357|gb|ACN17640.1| putative ABC-type amino acid transport-system, periplasmatic
           component [Desulfobacterium autotrophicum HRM2]
          Length = 299

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 106/252 (42%), Gaps = 9/252 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M K      L L +L     +   S  I+  I++ G ++ G     + FA +   +G+  
Sbjct: 1   MIKKIINIGLTLFLLIICGAAPGGSDEIMDRIERTGIIRIGFRQDAIPFAYLDPVSGEHI 60

Query: 58  GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           GF VD    L+  +   F    +IQ + +N + R   +   +ID+   ++ + L RE   
Sbjct: 61  GFSVDMAGLLAENLSKHFRKKIRIQPVVINTENRIPLIVKHEIDVEMGSSTYNLERE--Q 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-AHNMKYHP 173
            + F  + +     F++  +  I ++  ++G ++   AGTT    L    +       + 
Sbjct: 119 TVDFSLMFFISETTFMVRSQSAIRTMDDINGKTVGAAAGTTNLSALQSMVQIKRLKSVNI 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            + + + +     +    DA   D + L  +++ +  P+   IL   IS  P A  + + 
Sbjct: 179 KIIKTISQGFTDLKKGVIDALCLDRTLLNVMRIKDSDPNALTILNFAISYEPYAYIVPEN 238

Query: 234 DTEWYNIVSWTH 245
           ++++ + ++ T 
Sbjct: 239 NSDFRDFLNNTI 250


>gi|193077070|gb|ABO11828.2| putative ABC transporter [Acinetobacter baumannii ATCC 17978]
          Length = 236

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 8/208 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G+ +    F  + A G  +GFDV+  + ++  +  D +K++++   A  R   L++ 
Sbjct: 2   VRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTEAANRVEYLKAN 61

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++DI+  N   T  R+    + F         G +  K   I+ V+QL   ++ V  GTT
Sbjct: 62  KVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLKDKTLLVNKGTT 119

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +     +F   + +     +E+  E   A +  R  A   D   + A     + P+  V
Sbjct: 120 ADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAWA--KENPNYTV 173

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            + ++  +  +APA+ +GD E  N ++ 
Sbjct: 174 GITNLGEQDLIAPAVKKGDKELLNWLNQ 201


>gi|116248754|ref|YP_764595.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253404|emb|CAK11792.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 261

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 94/283 (33%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F +I  L   F    ++ A  L DI  RG L+  +      F  V  +    G+D+D
Sbjct: 4   RRVFFAIATLAATFGFGSASYADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      +    + +  R   LQ+ ++D++  +      RE    + F    
Sbjct: 64  VANLIAEKLGVKTELVP---VTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFTTAY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G        I+ V  L+G SI V  G   +L L     A         +E     
Sbjct: 119 APFFNGVFAPADVSIAKVEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A+ + + D          A+      P +   +  +I  SP    + +  T     V+
Sbjct: 176 ISAFLSGQVDTIATGNVVAAAILS--KNPPKRPEMKFLIKNSPCYIGLNKEQTALLEKVN 233

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
               A  T   L                   Q++LG D  S++
Sbjct: 234 GIIAAAKTDGALNAIS---------------QKWLGADLPSDL 261


>gi|291561845|emb|CBL40645.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4]
          Length = 286

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 86/268 (32%), Gaps = 31/268 (11%)

Query: 1   MYKDFFVSILC-LIILFFTSFS----------------------TNASILGDIKKRGFLK 37
           M K    +++   ++L   +                           +        G L 
Sbjct: 1   MKKRLLSAVMASAMVLSLAACGGAKTETTAAETTAEKKEETTTAGTTAAETAEAAGGTLI 60

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G +        V  NG++ GFD+D  + ++S +  +       P+    + + L+S  I
Sbjct: 61  VGFDQDFPPMGFVGDNGEYTGFDLDLAKEVASRLGLEYKA---QPVAWDSKDMELESGNI 117

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D +      T   +      +      + Q F++     I S + L+G  + VQA ++ E
Sbjct: 118 DCIWNGFTITGRED---DYTWTTPYMANKQVFVVANDSDIKSQADLAGKVVEVQADSSAE 174

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L +     N     +                 DA   D   + A      R ++  IL
Sbjct: 175 AALKENQDLANTFGQLLTTPDYNTAFMDLEQGAVDAVAMD--VIVAGYQIKQRNADFKIL 232

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D +S+        +G+TE  + V    
Sbjct: 233 DDSLSEEEYGVGFKKGNTELRDKVQGAL 260


>gi|296274364|ref|YP_003656995.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098538|gb|ADG94488.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 268

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 85/237 (35%), Gaps = 13/237 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +  L++        N        ++  LK G+      F     +G+  G  
Sbjct: 1   MKKLLFAILSSLLVFILAGCGENEK--EQKSEKKVLKVGMELAYPPFEMSDKDGNPSGVS 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF +AL   +  D   +    +       +L++ +ID++  +   T  R+    + F  
Sbjct: 59  VDFAKALGKYLGRD---VVIENIAWDGLIPSLKTGKIDLIISSMTITDERKK--SIDFSI 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    + +K  GI S+  L+  G ++ V+ G+T  +   ++    N     +VF++
Sbjct: 114 PYAQSSLAILANKDSGIKSIDDLNVKGKTVAVKKGSTGHIYAKEHLPNAN----VLVFDK 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                      + D +  D   +Y     +   +  ++ P          A+ +G  
Sbjct: 170 EAACVLEVVQGKADGFIYDQLTIYKNYAKHMDTTVPLLQPFQKDFEYWGVALKKGSP 226


>gi|258540197|ref|YP_003174696.1| amino acid ABC transporter substrate-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
 gi|257151873|emb|CAR90845.1| ABC transporter, amino acid-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 274

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 9/226 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +  IL + K    +  G+      F  +    G  +GFDVD  +A++  I       Q 
Sbjct: 29  ADRDILTNAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +  R   ++   +D +      T  R+    L F  + +  GQ  ++ K   I SV
Sbjct: 89  VQVTSDTRVPMIKGGNLDAVIATMTITPERQKI--LDFSDVYFNAGQSLLVKKGSPIKSV 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L   +  +    +      D  K        +      +   A ++ + DA T D   
Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNGI 203

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           LY +   +     +++     +K P   AI +G   +   V+    
Sbjct: 204 LYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVKAVNKAIK 246


>gi|182438660|ref|YP_001826379.1| putative ABC transporter solute-binding protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178467176|dbj|BAG21696.1| putative ABC transporter solute-binding protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 351

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD 73
                 S +   +  IK+RG L  G++     +        + +GFD+D  RA++  +  
Sbjct: 76  ASLPPSSADGPGVEKIKQRGKLIAGVDQNSFRWGYRNPEARELEGFDIDLVRAIAKDVLG 135

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DP  + +  +   +R  AL++ ++D++ R       R     ++F    +  GQ  +  K
Sbjct: 136 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 193

Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183
              I+     L G  +C   G+T    L          D F         +      +  
Sbjct: 194 GSTITGYDASLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTARDPDLLTVPNQLDCL 253

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +           P+  +      +      A  +G  +    V+ 
Sbjct: 254 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKAPFTTEYYGVATKKGADDLVARVNK 311

Query: 244 TH 245
             
Sbjct: 312 VL 313


>gi|227824561|ref|ZP_03989393.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21]
 gi|226905060|gb|EEH90978.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21]
          Length = 263

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 12/256 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60
            K     IL  +++   S   N+      +++  L  G       F      +G+  GFD
Sbjct: 6   KKLALTGILAAVVVTSLSGCGNSGSKDAAQQKKELIVGTEPSFAPFEFPDGKDGEITGFD 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++  +  +   +    +     F A+ + QID+       T  R+      F  
Sbjct: 66  MDLIKAMAKKMGYEK--VTIKGMGFDALFPAMNAGQIDVAMAGMSITEERKK--QFLFTD 121

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I S++ L G  I VQ GTT          A         F+  
Sbjct: 122 PYYESGLMTIVRKDNTVIHSLADLKGKRIGVQLGTTGAQEAEKIEGAK-----VTNFDTS 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +      +    DA   D+  L    L     S    +           A  +G  E  +
Sbjct: 177 DLACLELKNGNVDAVISDLPVLE-YFLKKGGASYAKTVGTPKKGDFYGIAAPKGKKELID 235

Query: 240 IVSWTHYAMVTAEELG 255
            ++     +  + E  
Sbjct: 236 GLNKALKELKDSGEYQ 251


>gi|56421988|ref|YP_149306.1| amino acid ABC transporter substrate-binding protein [Geobacillus
           kaustophilus HTA426]
 gi|56381830|dbj|BAD77738.1| amino acid ABC transporter (substrate-binding protein) [Geobacillus
           kaustophilus HTA426]
          Length = 273

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 80/260 (30%), Gaps = 15/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   V+++  + +   +   +         + + +  +  G +     F  ++  G  
Sbjct: 4   MKKGLIVAVVAALFMALAACGKSTETSSPSGAEKEGKQKITVGTDAAFAPFEYMQ-KGKI 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD D   A+      D        +     F +LQSK+ID+       T  R+     
Sbjct: 63  VGFDADLLDAVMKEAGLDYE---LKNIGWDPLFASLQSKEIDMGISGITITDERK--QSY 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +   Q  ++ +   + +   L G +I VQ  TT +      F       H   F
Sbjct: 118 DFSAPYFEATQVILVKQGSPVKNALDLKGKTIGVQNATTGQEAAEKLF---GKGDHIKKF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDT 235
           E              DA   D +        N      VI  P   +         + D+
Sbjct: 175 ETSVVAIMELLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPQNFASEYYGMIFPK-DS 233

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V      ++ + +  
Sbjct: 234 ELKAKVDEALQKVIDSGKYA 253


>gi|134046501|ref|YP_001097986.1| extracellular solute-binding protein [Methanococcus maripaludis C5]
 gi|132664126|gb|ABO35772.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 260

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 87/246 (35%), Gaps = 11/246 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + ++  ++ F       AS         G L  G +     F E  A+G+  GFD
Sbjct: 5   KKLILLGLVVSLVAFSGCTEDQASAKGSMTMTEGILVVGTDPTFPPFEEKNADGELVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +   IQ++         AL++++ D +      T  R   +   F  
Sbjct: 65  IDLMNALGEKMGIE---IQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVA--FTN 119

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q   ++     + SV  L+G  +  Q GTT E     Y +          +E +
Sbjct: 120 SYFDAAQVIAVLIDDDSVQSVDDLAGKVVAAQLGTTGEYEAQHYAEELGF--EIKSYEVM 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R +A   D     A +  + +P  + ++ + ++      A    + E  +
Sbjct: 178 ADAFIDMENGRVNAVVTDD--GVAQRFLDTKPGVYKVVGEPMTSESYGLAANLDNQELID 235

Query: 240 IVSWTH 245
            ++   
Sbjct: 236 ALNNAL 241


>gi|42522401|ref|NP_967781.1| glutamine transport system substrate-binding protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39574933|emb|CAE78774.1| Glutamine transport system substrate-binding protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 262

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 82/256 (32%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   +   CL+++        S  A        +  L  G +     F    A+    
Sbjct: 1   MKRLSLLITSCLLLMTLGCTKKESGTADTAAKTSAKKELTVGTDAAYAPFEIENADKSIS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD++  +A+++        +  +    +  F  L+S   DIL         R+ ++   
Sbjct: 61  GFDIEIIQAIAAK---QGLTLNIVNTPWEGLFSQLESGDRDILISAITINDERKKTM--D 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +   Q   +     +S    L    + VQ GTT +  +           +   FE
Sbjct: 116 FSEPYFDAVQLIAVPNSSKVSKFDDLKKLKVGVQIGTTGDEVVTRLLGRA--SSNIKRFE 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTE 236
                         DA   D   +         P +  +L D    K     A+ +G+T+
Sbjct: 174 GTPLALQELINGGVDAVVADNGVINNFFAN--NPKDFKVLSDTTFSKEQYGIAVKKGNTD 231

Query: 237 WYNIVSWTHYAMVTAE 252
               ++    A + A+
Sbjct: 232 LLKKINDGL-AAIKAD 246


>gi|190894698|ref|YP_001984991.1| putative amino acid ABC transporter substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|218511056|ref|ZP_03508934.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli Brasil 5]
 gi|218517081|ref|ZP_03513921.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
 gi|190700359|gb|ACE94441.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|327192281|gb|EGE59246.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CNPAF512]
          Length = 261

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 93/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F +I  L   F  +  ++A  L DI  RG L+  +      F  V  +    G+D+D
Sbjct: 4   RRVFFAIATLAATFGFNAPSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      +    + +  R   LQ+ ++D++  +      RE    + F    
Sbjct: 64  MANLIAEKLGVKAELVP---VTSANRVPYLQTNKVDLVISSLGKNPDREKV--IDFSVAY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G        ++    L+G SI V  G   +L L               +E     
Sbjct: 119 APFFNGVFAPADLAVAKAEDLAGKSIGVTRGAVEDLELTKIAP---TDATIKRYEDNNGT 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A+ + + D          A+      P +   L  +I  SP    + +  +     V+
Sbjct: 176 ISAFLSGQVDIIATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQSALLEKVN 233

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
               A  T   L                   Q++LG D  S++
Sbjct: 234 GIIAAAKTDGTLNAIS---------------QKWLGADLPSDL 261


>gi|330957137|gb|EGH57397.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 261

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVMARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L++             FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAMVTAEELGITQKN 260
            V+    A      L    + 
Sbjct: 231 KVNEILNAAKADGSLEKASQT 251


>gi|238764882|ref|ZP_04625822.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC
           33638]
 gi|238696901|gb|EEP89678.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC
           33638]
          Length = 266

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 84/253 (33%), Gaps = 15/253 (5%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +      + +L  +K+RG L  G+      F+    +G   GF
Sbjct: 7   RRQMVLGMVAVALAIGLNVKSYAASDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L+SK+ID+       +  R+      F 
Sbjct: 67  EVDFANALAQHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      S    L G  + V  G+  E  L +  K          ++
Sbjct: 122 TPYTVSGIQVLTKKGNEGNFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L     +   +     ++     A+ + + E 
Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNNTLAVAGPAFARQESGIALRKNNPEL 235

Query: 238 YNIVSWTHYAMVT 250
              ++     M  
Sbjct: 236 LAAINKAIAEMQE 248


>gi|229553193|ref|ZP_04441918.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus rhamnosus LMS2-1]
 gi|229313489|gb|EEN79462.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus rhamnosus LMS2-1]
          Length = 294

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 9/226 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +  IL + K    +  G+      F  +    G  +GFDVD  +A++  I       Q 
Sbjct: 49  ADRDILTNAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 108

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + +  R   ++   +D +      T  R+    L F  + +  GQ  ++ K   I SV
Sbjct: 109 VQVTSDTRVPMIKGGNLDAVIATMTITPERQKI--LDFSDVYFNAGQSLLVKKGSPIKSV 166

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L   +  +    +      D  K        +      +   A ++ + DA T D   
Sbjct: 167 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNGI 223

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           LY +   +     +++     +K P   AI +G   +   V+    
Sbjct: 224 LYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVKAVNKAIK 266


>gi|297156308|gb|ADI06020.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces bingchenggensis BCW-1]
          Length = 310

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 90/235 (38%), Gaps = 14/235 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++      K+RG+L  G         E     G + GFD++  + +++++  DP  +++ 
Sbjct: 56  SSPTWRKAKRRGYLVVGAKEDQPYLGEKDPATGRYSGFDIEIAKMMAASLGFDPKTVRFK 115

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140
            + +  R  ALQ+ QID          LR+  +G  F    +  GQ  ++   +  I   
Sbjct: 116 TIASANRETALQNGQIDYYVGTYTINPLRKRLVG--FAGPYFIAGQSLLVRTDEHDIHGP 173

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++C  AG+T  + +   +       H + ++          + + DA T D + 
Sbjct: 174 KDLAGKTVCSVAGSTPLMRIQSDYPKA----HAVAYDTYSVCVDNLISLQVDAVTTDNTI 229

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L         P E  ++    SK P    + + D        +     + A E  
Sbjct: 230 LLGYAAKA--PKELKVVGKPFSKEPYGIGVPKKDNAL----RFALNDAIEANERN 278


>gi|297196054|ref|ZP_06913452.1| glutamate binding periplasmic protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297153047|gb|EDY67215.2| glutamate binding periplasmic protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 312

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 80/238 (33%), Gaps = 9/238 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++  L   +K G L  G              G+  GFD++  + +++ +     KI++  
Sbjct: 58  DSPTLEKAQKAGKLVIGAKNDQPFLGFEDEKGNRSGFDIEIAKMIAADLGFSADKIEFKT 117

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141
           ++   R  A+ + ++D+          R+    +AF    Y  G   ++ +    I+   
Sbjct: 118 VDTGVREAAISNGEVDLYVGTYTINEERKK--KVAFAGPYYMAGADLLIREDDRTIAGPF 175

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G ++C   G+T    +             +   +  E        + DA T D + L
Sbjct: 176 SLEGKTVCSAKGSTALREIKKPE----YNTRTVETAKYTECVQQLLEGKVDAVTTDDAIL 231

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                      +  ++    ++ P    + + D    + VS    A     +  +   
Sbjct: 232 KGYAAQ--HAGKLKVVGQPFTEEPYGIGMAKDDEALRDAVSDALQAHDENGDYKLAYD 287


>gi|330900314|gb|EGH31733.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 264

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 4/241 (1%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
           +L  T  +   S L  + KRG L  G  +    +    A+G  +GFD+D  R ++  +F+
Sbjct: 1   MLANTVQAAEGSKLDAVSKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    Y +G   ++  
Sbjct: 61  DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPA 118

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 +  L  A   V       +   +       K     ++ V+ +  A  + R D 
Sbjct: 119 NSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADT 178

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              D S+     L    P  +       S    A A+ +GD +W N V+   +  +T  E
Sbjct: 179 AATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 236

Query: 254 L 254
            
Sbjct: 237 F 237


>gi|290963270|ref|YP_003494452.1| glutamine-binding protein precursor [Streptomyces scabiei 87.22]
 gi|260652796|emb|CBG75929.1| putative glutamine-binding protein precursor [Streptomyces scabiei
           87.22]
          Length = 292

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 92/254 (36%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53
            +    ++ CL++                  S +  + +RG    GI      F   + +
Sbjct: 4   RRSVLAALTCLVLGSCGLPGEEGPGSRFPEGSTMARVAERGVFTVGIKFDHPLFGYKEPS 63

Query: 54  -GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G   GFD +  R ++  +      I+++    + R   L+   +DI+      +  R  
Sbjct: 64  TGRITGFDAEIARMVAKDLTGSERNIRFIETMPRNREDFLRRGVVDIVVATYSISEERRK 123

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              + F    Y+  Q  ++   +  I  ++ L+G  +C  AG+T+   L           
Sbjct: 124 L--VDFTDPYYYSRQDVLVRSDERGIRDLADLAGRDVCTAAGSTSAQRLRGEVSRA---- 177

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             ++ +   E  AA    R DA + D S L  L     +P    ++     + P A  + 
Sbjct: 178 RLVIVDTYSECMAALVDGRIDAISTDESILLGLMSR--QPDTVRLVGKPFGREPYAIGVR 235

Query: 232 QGDTEWYNIVSWTH 245
           +GDT   + ++   
Sbjct: 236 RGDTGLRDYLNGLI 249


>gi|119945248|ref|YP_942928.1| ABC transporter extracellular solute-binding protein [Psychromonas
           ingrahamii 37]
 gi|119863852|gb|ABM03329.1| ABC transporter extracellular solute-binding protein, family 3
           [Psychromonas ingrahamii 37]
          Length = 275

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 7/251 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M     +S++   +    +FS  +A  L D+   G L CG+            N    GF
Sbjct: 1   MKLVKKISLVVASMAAIGAFSTASADKLDDVINSGTLNCGVVLDFPPMGYTDKNNQPAGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+C  L+  +    + I    L   +R  +L S + D++  +T  TL R  S+G  F 
Sbjct: 61  DVDYCNDLAKVLGVKSNVIN---LTWGDRIPSLISAKTDVVVGSTSDTLARAKSVG--FT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178
              +      +  K   ++S   L    +    GTT E     Y         +   F+ 
Sbjct: 116 YPYFVFKFQVLSKKGVKMTSFDDLKNVKVGAALGTTYEKEYFAYADDKGWGRDNYTSFKS 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        + DA     + +     +    +             +   + + +  W 
Sbjct: 176 ENDAFLGLHQGKIDALISTNTNIATKLTSGQFDNFVAGPYVPNYDDVVGLIVKRSELAWK 235

Query: 239 NIVSWTHYAMV 249
           + ++      +
Sbjct: 236 SYLNLFLVHQI 246


>gi|329116401|ref|ZP_08245118.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
 gi|326906806|gb|EGE53720.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
          Length = 278

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 13/253 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K    ++   + +   +  +  S        + KK   +  G +   V       +G  
Sbjct: 4   KKLILTAMTAFMAIILVACGSKESSTKSDGWANYKKTKTITLGFDNTFVPMGYKDESGKN 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDV+  +A+         K+++ P+N   +   L++ +ID++      T  R+    +
Sbjct: 64  TGFDVELAKAVFDQYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSITKERQA--KV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173
           AF      + Q  +  K   I+S S + G  +  Q+G++         K           
Sbjct: 119 AFSNPYMKNEQVLVTKKSANITSFSGMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDKDA 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D              + + I+         A  + + 
Sbjct: 179 TQYETFTQAFIDLKSGRIDGLLIDKVYANYYLKQEGELANYNIVKSEYEGENFAVGVRKE 238

Query: 234 DTEWYNIVSWTHY 246
           D      ++ +  
Sbjct: 239 DKTLVKNLNKSLK 251


>gi|119387649|ref|YP_918683.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119378224|gb|ABL72987.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 266

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 89/255 (34%), Gaps = 7/255 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M            +    +    A  L DI+ RG +  G++ G   F  V  + +  G D
Sbjct: 1   MTIRNLTLAALTAVGLAAALPAGADTLSDIRDRGTINIGVDIGQAPFGMVDGSMNQTGSD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R L+  +    + +    +    R   L + ++D++  +   T  R+    + F  
Sbjct: 61  VDTARKLAEDLGVKLNVVS---VAPANRIPFLLTGKVDVVVASFSITEERKK--QVDFSK 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                           +S  + L G  I V   +T +  + D   A+++K   + ++   
Sbjct: 116 PYAVSEVVVATTGGLELSGPADLEGRQIAVTRASTNDTLITDAIAANDVKATIVRYDDNA 175

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  + + D Y    S L  +      PS  +    ++   PLA  + + + E  + 
Sbjct: 176 MTTNAVLSGQHDVYVVAQSLLVPI--NEANPSRKIEPQFVLRTYPLAIGLRKNEPELKDW 233

Query: 241 VSWTHYAMVTAEELG 255
           +       +   +L 
Sbjct: 234 LDNWVDENLANGKLN 248


>gi|94990605|ref|YP_598705.1| histidine-binding protein [Streptococcus pyogenes MGAS10270]
 gi|94544113|gb|ABF34161.1| Histidine-binding protein [Streptococcus pyogenes MGAS10270]
          Length = 278

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K     +      F  +        +    G  +K+  +  G +   V       +G  
Sbjct: 4   KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  + +         K+ +  +N   +   L + +ID++      T  R     +
Sbjct: 64  KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QDKV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174
           AF      + Q  ++ K+  I ++S +    +  Q+ ++    L    K           
Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDALLRTPKLLKDFIKNKDA 178

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D            +   + ++P        +  + + 
Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 239 DKTLQAKINRA 249


>gi|241196118|ref|YP_002969673.1| amino acid ABC transporter periplasmic protein [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|240250672|gb|ACS47611.1| ABC-type amino acid transport system periplasmic component
           [Bifidobacterium animalis subsp. lactis DSM 10140]
          Length = 279

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 98/255 (38%), Gaps = 14/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   +      +    +  ++++          ++ GI     G      +G ++GFDV
Sbjct: 11  RKAIAMVCAASALFGMAACGSSSADGEK-----KIRIGIKYDQPGLGFK-KSGTFEGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +++ +    ++I++L   +K+R   LQ+  +D++   +  T  R+    ++F   
Sbjct: 65  DVARYVANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATSSITDERKK--AVSFAGP 122

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +  GQ  ++      I+    L+G  +C   G+T+   + + F     +   +      
Sbjct: 123 YFVAGQDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAK---EVQLMEQPGYA 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A  +   DA T D   L  L   +       ++    ++      I +GDT +   
Sbjct: 180 ECATALFSGIVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIRKGDTAFAKQ 237

Query: 241 VSWTHYAMVTAEELG 255
           ++     M+ + E  
Sbjct: 238 INAAIEDMIKSGEWE 252


>gi|27378960|ref|NP_770489.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27352110|dbj|BAC49114.1| blr3849 [Bradyrhizobium japonicum USDA 110]
          Length = 302

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 8/259 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
                IL L  L   + + + +  L  +K+   +  G     V F+ +  N    GF +D
Sbjct: 2   RLPTVILALTCLAGAASAEDLSGTLQKVKETKKITLGYQEASVPFSYLDGNQKPVGFAMD 61

Query: 63  FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C     A+   +      ++ L + +  R   + +  +D+    T     R+  +   F
Sbjct: 62  ICLKIVDAVKKQLGMPDIVVETLAVTSSNRIPLMVNGTLDLHCSATTNNADRQKQVA--F 119

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +     F   K   I+++  L G ++   AG+     LA       +  + +  + 
Sbjct: 120 TNTHFLSATRFAAKKAAKINTIDDLKGKAVTAVAGSVNLTQLAKVNTERTLGINIMPAKD 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237
             E        R  AY  D   L      +  P+  +I  +  SK  P    + + D  +
Sbjct: 180 QAEAFLLLETDRAQAYALDDVQLAVAIARSKEPALFMISEETFSKPEPYGIMLRREDAPF 239

Query: 238 YNIVSWTHYAMVTAEELGI 256
             +       +  + E+ +
Sbjct: 240 KALADRATAELYASPEIEV 258


>gi|313123646|ref|YP_004033905.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280209|gb|ADQ60928.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 286

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%)

Query: 1   MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M K       + I+ LI++   +            T  S         +IK+RG+++  +
Sbjct: 1   MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V   G   G+DV   R ++  +     KI+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNDQGKRVGYDVYLVRRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S  +L G  + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                A     + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
             +  +APA+ +G+       +
Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250


>gi|310287212|ref|YP_003938470.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17]
 gi|311064072|ref|YP_003970797.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010]
 gi|309251148|gb|ADO52896.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17]
 gi|310866391|gb|ADP35760.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010]
          Length = 279

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 94/265 (35%), Gaps = 17/265 (6%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
               +   +   +        + G ++ GI     G      +G + GFDVD  + ++  
Sbjct: 22  VACTMSLAACGAD--------ESGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYVAKK 72

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +I +    +K+R   LQ+  +D++      T  R+    ++F    +  GQ  +
Sbjct: 73  LGYSEDEIVWKEAPSKQREAMLQNGDVDMILATYSITDERK--NAVSFAGPYFVAGQDLL 130

Query: 131 MHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           + K    I+    L+G  +C   G+T+  T+   F +   +   +      E   A  + 
Sbjct: 131 VRKDDHSINGPEDLNGKRLCSVTGSTSAATVKKKFAS---EVQLMEQPGYAECATALFSG 187

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             DA T D   L  L   +       ++    ++      I +GDT     ++     M+
Sbjct: 188 IVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMI 245

Query: 250 TAEELGITQKNINQVSKDTTNPDVQ 274
                     +  + +  T N +  
Sbjct: 246 KDGSWERAIADNTEGTSYTPNAEYN 270


>gi|251781981|ref|YP_002996283.1| amino acid ABC transporter amino acid-binding protein
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242390610|dbj|BAH81069.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
          Length = 268

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG- 54
           M K   + I  L+ L   S S  +     ++L  I K+G L+ G+   +  F        
Sbjct: 3   MKKYSLLVICFLLTLICPSLSQASELTTPNVLKQITKKGQLRIGVKQDVPNFGYYHPKHR 62

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            ++G ++D  + ++ A+   P   Q+  + A+ R   L ++Q+D++      T   E   
Sbjct: 63  QFEGMEIDIAKKIAKALNVKP---QFTAVTAQTREALLDNQQLDMIIATYTITP--ERQK 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             AF    Y D  GF++ K   I+S+ +L   +I V  G+TT+  + +Y KAH++ +  +
Sbjct: 118 QYAFSNPYYLDEIGFLVKKSDAITSIKELDQKTIGVAQGSTTKNAIEEYGKAHDLSFSFV 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+  +  A+R  +++ D S L              IL +  ++     A  + +
Sbjct: 178 QLGSYPELAISLYANRIASFSVDKSILSGYTNQKT-----TILTEGFNQQAYGVATTKSN 232

Query: 235 TEWYNIVSWTH 245
                 ++   
Sbjct: 233 KALITHINKLL 243


>gi|139473662|ref|YP_001128378.1| putative amino acid ABC transporter,extracellular amino
           acid-binding protein [Streptococcus pyogenes str.
           Manfredo]
 gi|306827255|ref|ZP_07460542.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pyogenes ATCC 10782]
 gi|134271909|emb|CAM30147.1| putative amino acid ABC transporter,extracellular amino
           acid-binding protein [Streptococcus pyogenes str.
           Manfredo]
 gi|304430402|gb|EFM33424.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pyogenes ATCC 10782]
          Length = 278

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K     +      F  +        +    G  +K+  +  G +   V       +G  
Sbjct: 4   KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  + +         K+ +  +N   +   L + +ID++      T  R     +
Sbjct: 64  KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QNKV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174
           AF      + Q  ++ K+  I ++S +    +  Q+ ++   +L    K           
Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D            +   + ++P        +  + + 
Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 239 DKTLQAKINRA 249


>gi|332161361|ref|YP_004297938.1| cystine transporter subunit [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665591|gb|ADZ42235.1| cystine transporter subunit [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 266

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +        +L  +K+RG L  G+      F+    +G   GF
Sbjct: 7   RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L+SK+ID+           +      F 
Sbjct: 67  EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTI--SDDRKKKYDFS 121

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      S    L G  + V  G+  E  L +  K          ++
Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L         +     ++     A+ + + E 
Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPEL 235

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 236 LAAINQAI 243


>gi|323697579|ref|ZP_08109491.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323457511|gb|EGB13376.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 274

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 88/227 (38%), Gaps = 11/227 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
                  +     LK G++   + F  +    +W GFDVD    ++  +     K+    
Sbjct: 22  AGPTYDRVMSTKTLKVGLSNQGIPFGFIDDKNEWVGFDVDMATEIAKRLGCKLEKVV--- 78

Query: 83  LNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +N   R   +Q+   ++D++  N   T  R     + F    +FDGQ F+  K   +  V
Sbjct: 79  VNNNTRISFVQTNPPKVDMVLSNM--THKRVRDEKIDFSITYFFDGQKFLAKKG-TVKDV 135

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDIS 199
             L+   +    GTT+ +    Y K        +  ++    +  A R+ R  A T D +
Sbjct: 136 KDLANMKVGSMQGTTSIVNATAYLKELGNPNPSVTGYDGEVAMFEALRSGRVQAITTDST 195

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            L         P +  ++ D IS  P    + Q D+ W + +++T  
Sbjct: 196 ILLGYAAKV--PGQFELVGDFISDEPYGIGLPQDDSAWRDTINFTLQ 240


>gi|306833969|ref|ZP_07467093.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
 gi|304423970|gb|EFM27112.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
          Length = 281

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 109/279 (39%), Gaps = 19/279 (6%)

Query: 1   MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K           + +L L     T   + +  +  I+  G LK G+   +  F    A
Sbjct: 12  MKKKLGLAILASLSLILLTLFTGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 71

Query: 53  -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G ++G +VD  + ++  +      + +  + A+ R   L + QIDIL      T  R+
Sbjct: 72  ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTAQTREALLDNGQIDILIATYTITEERQ 128

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF+++K KG  S++ L G +I V  G+TT+  + +Y +AHN+ +
Sbjct: 129 ASYAI--SNPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 186

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +      E+  +  A+R  A++ D S L              I+ +  +      A  
Sbjct: 187 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 241

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           + +    + ++           L       +       +
Sbjct: 242 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPAKAND 280


>gi|271499666|ref|YP_003332691.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270343221|gb|ACZ75986.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 273

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 83/259 (32%), Gaps = 20/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L      S +   S L  +K+ G ++  +      F+ +  N    GFD
Sbjct: 1   MKKLLTLMALALSTCLALSTAQAGSTLDRVKQTGVVRNVLFNDYPPFSYLNDNNQLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +                        + D+   +      R     L F  
Sbjct: 61  VDVANAVAQKLGAKLELATPGWETIVGGK---WQGRWDMCICSMTPNAERAKV--LDFAT 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177
             Y      I+HK +  I S + LS   + +  G++ E  L         K     F+  
Sbjct: 116 PYYSTFAVLIVHKDEKNIHSAADLSNKKVGLGLGSSYENYLNKSLVIPGGKPIAFPFDHV 175

Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                  E            R DA   D       K   ++  +  IL ++    P   A
Sbjct: 176 QAVPTDEEMAFRNLALGPGKRLDAVISDRI---TAKPRLEKLPQLRILQELY-AEPNWIA 231

Query: 230 IIQGDTEWYNIVSWTHYAM 248
           + +GD EW   ++ T  A+
Sbjct: 232 VDKGDPEWSKTLADTITAL 250


>gi|257093638|ref|YP_003167279.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046162|gb|ACV35350.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 268

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 7/213 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G++                GFD+D        +  +   +++ P++   +   L SK
Sbjct: 42  IVVGLDDNFPPMGFRDEKNTLVGFDIDLAGEAGKRLGAE---VKFKPIDWNAKEAELNSK 98

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++D+L      T  R+    + F      + Q  ++  K  + + + L+G  + VQ G++
Sbjct: 99  RVDVLWNGLTITEARKE--KILFTTPYLENRQIIVVTDKSPVKTKADLAGKVVGVQDGSS 156

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +               F           A R DA   D   +     T  +P E+ 
Sbjct: 157 AIEAVEKDAATAKSLKELKKFGDNVTALMDLGAGRLDALVVDE--VVGRYYTTKKPGEYR 214

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +L +            + DTE    +  T   M
Sbjct: 215 VLDENFGTEDYGVGTRKDDTELMAKLQKTLDEM 247


>gi|239908611|ref|YP_002955353.1| bacterial extracellular solute-binding protein [Desulfovibrio
           magneticus RS-1]
 gi|239798478|dbj|BAH77467.1| bacterial extracellular solute-binding protein [Desulfovibrio
           magneticus RS-1]
          Length = 270

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 94/265 (35%), Gaps = 25/265 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +   V  L  + L     +            S L  I KRG L  G+      F  V 
Sbjct: 1   MIRFIRVVCLAFVALTMCCGTALAITPYDIYEGSALRQIVKRGKLVVGMELKFWPFEYVD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G   GFDVD  + L+  +  +   ++   +       AL S +ID++      TL R 
Sbjct: 61  EKGKPVGFDVDIAKTLAERLGVE---LEIKDMEWTGLIPALTSGKIDLIISGITGTLERA 117

Query: 112 ISLGLAFRPITYFDGQGFI--MHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAH 167
            +  + F    +  G   +  + K   ++  + L   G  I V+ GTT ++  A  F   
Sbjct: 118 KT--ITFSSPYFTTGLCILASVQKAPDLTDAAGLDKPGRVIAVKTGTTADIVAAKRFPKA 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                   ++      A   A R DA+  D  ++   K     P     L    +  P  
Sbjct: 176 ----TINRYQDETACAADVAAGRADAFIYDQISIA--KHQKQHPETTKALLTPFTYEPFC 229

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAE 252
            A+ +GD + +  V     A + A+
Sbjct: 230 IAMQKGDFDLWQYVEMYI-ASIKAD 253


>gi|330829209|ref|YP_004392161.1| amino acid ABC transporter amino acid-binding protein [Aeromonas
           veronii B565]
 gi|328804345|gb|AEB49544.1| Amino acid ABC transporter amino acid-binding protein [Aeromonas
           veronii B565]
          Length = 260

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++  L +    +    A      K+   ++ G+      F+   A+G+ KGFD
Sbjct: 1   MMK-IRLTLSALFVASLLATPAMA------KEWKTVRFGVEGAYPPFSWTDASGEIKGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +     K + +  +      AL S++ D +      T  R     + F  
Sbjct: 54  IDLANALCQQM---AVKCELVAQDWDGMIPALLSRKYDAIIAAMSITDER--RQKVDFTE 108

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K   ++ +   ++G  I VQ  TT +  L D F ++      + +   
Sbjct: 109 KYAHIPNRFVAAKGTELTLTPEGMAGKRIGVQRATTHDKYLTDNFGSN---VTIVRYGNA 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E     +A R  A   D SA+    L  +   +   +   ++           A+ + D
Sbjct: 166 DEAYLDLKAGRVLALLADASAIEQGLLGKEGGDKFDYVGPALTDRQWFGDGMGIAVRKSD 225

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 226 KELKGKLDEAIKAL 239


>gi|187919125|ref|YP_001888156.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187717563|gb|ACD18786.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 251

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 87/255 (34%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M     +S+ C+ +    +    + +A           L    +           NG   
Sbjct: 1   MKLQRLLSLACVTVAVTFAGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL+ A+      +Q+  ++ K     L + + D        T  R     + 
Sbjct: 54  GFDVDLMNALAKAMGKK---VQWTDIDFKGLIPGLIAHRFDAAISGIYITDERAKV--VD 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G   ++     I SV +L+G  + VQ GT +   L D F   N     +  E
Sbjct: 109 FTDSYYAGGLVVLVKSNSPIKSVEELNGKKVSVQVGTKSVNFLRDNFPQINR----VEVE 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           + +E+       R DA      A Y L  T        +L   ++      A+ + + + 
Sbjct: 165 KNQEMFDLVGIGRADAAVTGKPAAYQLVKTRGG---FRVLDKPLTTEAYGIAVRKDEPQL 221

Query: 238 YNIVSWTHYAMVTAE 252
               +    A + A+
Sbjct: 222 KAAFNTAL-AKIKAD 235


>gi|94994528|ref|YP_602626.1| Histidine-binding protein [Streptococcus pyogenes MGAS10750]
 gi|94548036|gb|ABF38082.1| Histidine-binding protein [Streptococcus pyogenes MGAS10750]
          Length = 278

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K     +      F  +        +    G  +K+  +  G +   V       +G  
Sbjct: 4   KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  + +         K+ +  +N   +   L + +ID++      T  R     +
Sbjct: 64  KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QNKV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174
           AF      + Q  ++ K+  I ++S +    +  Q+ ++   +L    K           
Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D            +   + ++P        +  + + 
Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 239 DKTLQAKINRA 249


>gi|311895159|dbj|BAJ27567.1| putative glutamate ABC transporter substrate-binding protein
           [Kitasatospora setae KM-6054]
          Length = 303

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 82/228 (35%), Gaps = 10/228 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
             T +  L   + RG L  G         +     G++ GFD++  R + + +   P +I
Sbjct: 50  AVTGSPTLDAARARGHLVVGAKEDQPYLGQKNPATGEYSGFDIEIARMVGADLGFAPERI 109

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137
           ++  + +  R  ALQ+ Q+D           R+  +G  F    +  GQ  ++ K    I
Sbjct: 110 EFRTIASANRETALQNGQVDYYVGTYTINDNRKKLVG--FAGPYFVAGQSLLVRKNETKI 167

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                L+G  +C  AG+T    +      +  +   I ++            + DA T D
Sbjct: 168 DGPQDLAGRKVCSAAGSTPYQRIQ----KNYPQAKLIGYDTYSACVDNLITGQVDAVTTD 223

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + L         P E  I     S+ P    + +GDT     +    
Sbjct: 224 NAILQGYAAKV--PDELRIAGQPFSEEPYGIGVPKGDTALRLALDDAL 269


>gi|152981681|ref|YP_001351726.1| ABC transporter substrate binding protein [Janthinobacterium sp.
           Marseille]
 gi|151281758|gb|ABR90168.1| ABC transporter substrate binding protein [Janthinobacterium sp.
           Marseille]
          Length = 259

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  L    L  T+    A  L DI+K+G L+  +      F  V  +   +G D
Sbjct: 1   MKLSTILIGLMAGALLLTNV-ARADALDDIQKKGVLRVAVPQDFPPFGSVTTDMTPQGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +      ++ +P+ +  R   LQ+K++D++  +      RE    + F  
Sbjct: 60  IDVATLIAKKLGVK---VELIPVTSANRIPYLQTKKVDLVISSMGKNPEREKV--IDFSA 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G      + +++ + L+G +I V  G+  +L L+              +E   
Sbjct: 115 AYAPFFNGVFGPADQKVAAPADLAGKTIGVTRGSVEDLELSKIAPE---SATIKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +++ +++            A+      P +      +I  SP +  + +G+ +    
Sbjct: 172 GTISSFLSNQVQLVATGNVIAAAIIA--KNPPKKPETKFLIKNSPCSIGLNKGEEKLLEK 229

Query: 241 VSWTH 245
           V+   
Sbjct: 230 VNAII 234


>gi|21910442|ref|NP_664710.1| putative amino acid ABC transporter periplasmic amino acid-binding
           protein [Streptococcus pyogenes MGAS315]
 gi|28896017|ref|NP_802367.1| amino acid ABC transporter (periplasmic amino acid-binding protein)
           [Streptococcus pyogenes SSI-1]
 gi|94988716|ref|YP_596817.1| histidine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|94992539|ref|YP_600638.1| histidine-binding protein [Streptococcus pyogenes MGAS2096]
 gi|21904640|gb|AAM79513.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus pyogenes MGAS315]
 gi|28811267|dbj|BAC64200.1| putative amino acid ABC transporter (periplasmic amino acid-binding
           protein) [Streptococcus pyogenes SSI-1]
 gi|94542224|gb|ABF32273.1| histidine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|94546047|gb|ABF36094.1| Histidine-binding protein [Streptococcus pyogenes MGAS2096]
          Length = 278

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K     +      F  +        +    G  +K+  +  G +   V       +G  
Sbjct: 4   KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  + +         K+ +  +N   +   L + +ID++      T  R     +
Sbjct: 64  KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QDKV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174
           AF      + Q  ++ K+  I ++S +    +  Q+ ++   +L    K           
Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D            +   + ++P        +  + + 
Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 239 DKTLQAKINRA 249


>gi|307130005|ref|YP_003882021.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
 gi|306527534|gb|ADM97464.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
          Length = 273

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 76/259 (29%), Gaps = 20/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L   F  S +   S L  +K+ G ++  +      F+ +       GFD
Sbjct: 1   MKKLLALMALGLSACFMLSAAQAGSTLDRVKQTGVVRNVLFNDYPPFSYLDDKNQLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +                        + D+   +      R     L F  
Sbjct: 61  VDIANAVAQKLGARLELATPGWETIVGGK---WQGRWDMCICSMTPNAERAKV--LDFAT 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177
             Y      I+HK +  I S + LS   + +  G++ E  L         K     F+  
Sbjct: 116 PYYSTFAVLIVHKDEKNIQSAADLSNKKVGLGLGSSYENYLNKSLAIPGGKPIAFPFDHV 175

Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                  E            R DA   D            +      L       P   A
Sbjct: 176 QAVPTDEEMAFRNLALGPGKRLDAVISDRITAKPRIEKLPQLRILQEL----YAEPNWIA 231

Query: 230 IIQGDTEWYNIVSWTHYAM 248
           + +GD EW   ++    A+
Sbjct: 232 VDKGDPEWSKTLADAITAL 250


>gi|229520323|ref|ZP_04409749.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
 gi|229342689|gb|EEO07681.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
          Length = 260

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 3   MKKWLVAAALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     + + +P +      +L +++ D +      T  R+    + F  
Sbjct: 54  VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K      +   L G  I VQ  TT +  + D +         + +   
Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 226 KELTEKLDAAITAL 239


>gi|107022626|ref|YP_620953.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116689575|ref|YP_835198.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|170732879|ref|YP_001764826.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|206559974|ref|YP_002230738.1| periplasmic cystine-binding protein [Burkholderia cenocepacia
           J2315]
 gi|254245535|ref|ZP_04938856.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia cenocepacia PC184]
 gi|105892815|gb|ABF75980.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647664|gb|ABK08305.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124870311|gb|EAY62027.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia cenocepacia PC184]
 gi|169816121|gb|ACA90704.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
 gi|198036015|emb|CAR51908.1| periplasmic cystine-binding protein [Burkholderia cenocepacia
           J2315]
          Length = 264

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKFSLLKKLLVAGVIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKSPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +        ++          LQ+ + D+++     T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHYAMVTAE 252
           ++   +     A + A+
Sbjct: 229 KFQKAIDDAM-AQLEAD 244


>gi|327484415|gb|AEA78822.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae LMA3894-4]
          Length = 258

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 1   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     + + +P +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K      +   L G  I VQ  TT +  + D +         + +   
Sbjct: 107 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL            +  +   ++        +  A+ + D
Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGMFNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 224 KELTEKLDAAITAL 237


>gi|303230444|ref|ZP_07317205.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302514983|gb|EFL56964.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 270

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 10/246 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  + ++ F S   + +   D +    +  G++            G+  G D+
Sbjct: 4   KKIMAVGLAAVSMMAFVSGCGSDTKNADTQLPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +     D   +++  ++   +   L+SK+ID+L      +  RE    + F   
Sbjct: 64  DLAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDVLWNGLTVSPEREK--NILFSDT 118

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              D Q  ++      I   S L+G  + VQ  +T E  L +   +         +    
Sbjct: 119 YMKDKQYIVVRNDDNAIKGKSDLAGKVVGVQQASTGESALQND-PSGKTVKEIKSYADFV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239
                    R DA   D     A  L    P ++ I+          A    + DT   +
Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235

Query: 240 IVSWTH 245
            ++   
Sbjct: 236 KINGIL 241


>gi|163856809|ref|YP_001631107.1| periplasmic glutamine-binding protein [Bordetella petrii DSM 12804]
 gi|163260537|emb|CAP42839.1| periplasmic glutamine-binding protein [Bordetella petrii]
          Length = 247

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +    ++L L + +  + +              L+   +        V  NG   G
Sbjct: 1   MKTRRQLLTTVLALGLAWGAAPAHAQET---------LRVVTDATFPPMEFV-KNGQRTG 50

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++   AL  A+      I+++ ++ K    ALQ+ + D+       T  R+    + F
Sbjct: 51  FDIELIEALGQAMGKK---IEWIDIDFKGLIPALQAGRADMAVSAIYITDARK--QVVDF 105

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y  G   +  K   I S+  L G  + VQ GT +   L +++     +   +  E+
Sbjct: 106 TDPYYAGGLVVLTRKDGPIKSLKDLDGRKVSVQVGTKSVNYLKEHYP----QVQRVEVEK 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E+    +  R DA         A KL      E  +L + I+      A+ +   E  
Sbjct: 162 NQEMFNLVQVGRTDAAVTGKP---AAKLFAQNTPELTVLDEQITTEQYGIAVPKSKPELT 218

Query: 239 NIVSWTHY 246
             ++    
Sbjct: 219 AALNAALK 226


>gi|154486962|ref|ZP_02028369.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis
           L2-32]
 gi|154084825|gb|EDN83870.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis
           L2-32]
          Length = 301

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T+    A  L +IKK G LK  + +    F  +  +G   G+D+ F   L+  +    
Sbjct: 46  GATTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAKDLGVK- 104

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++Y  ++   R   L S ++DI   N   T  R+    + F         G +  +  
Sbjct: 105 --VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENA 160

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VSQL G ++ +  GTT E      F+ +        +++  +   A    R DA++
Sbjct: 161 EITDVSQLKGKTLIIAKGTTAESY----FEKNEPDVKLQKYDQYADAYNALLDGRGDAFS 216

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A   T       V +  +  +  +APA+ +G+ E  N ++ 
Sbjct: 217 TDNTEVLAWAKT--NKGFKVGITKLGDEDTIAPAVQKGNKELLNWIND 262


>gi|322833174|ref|YP_004213201.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321168375|gb|ADW74074.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 266

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 83/248 (33%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   +  +   L     ++   +  +L  +K RG L  G+      F+    +G   GF
Sbjct: 7   RRRLLLGAVAVTLTAGMVSNTFADEGLLKKVKDRGTLIVGLEGTYPPFSFQGEDGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+F  AL+  +       +  P        +L+SK+ID++      +  RE      F 
Sbjct: 67  EVEFADALAQHMGVKA---KLQPTKWDGMLASLESKRIDVVINQVTISPEREK--KYDFS 121

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K +   I+    L G  + V  G+  E  L    + +        ++
Sbjct: 122 TPYTVSGIQALTKKGQEGTITKPEDLKGKKVGVGLGSNYEQWL----RENVQGVDIRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R +A   D   L AL L         +     S+     AI + + E 
Sbjct: 178 DDPTKYQDLRVGRINAILVDR--LAALDLVKKTGDTLAVAGAPFSRLESGVAIRKDNPEL 235

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 236 LAAINKAI 243


>gi|237797984|ref|ZP_04586445.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020835|gb|EGI00892.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 261

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 90/261 (34%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADRL---QVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  V+ L G +I V  G   ++ L+              FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDVADLKGKTISVTRGAIEDIELSAVAPE---GTTIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAMVTAEELGITQKN 260
            V+    A      L    + 
Sbjct: 231 KVNEILNAAKADGALEKASET 251


>gi|157369177|ref|YP_001477166.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157320941|gb|ABV40038.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 263

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 95/244 (38%), Gaps = 10/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K   V  L  ++L   + S  A  L +I++RG L+  +      F  V  +   +G+D+
Sbjct: 3   FKKIGVVALGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    +AF   
Sbjct: 63  DMAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREK--AIAFSRT 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K+  ++  +QL+G +I V  G   ++ L+D             +E    
Sbjct: 118 YAPFFLGVFGPKESVLADATQLNGKTIGVTRGAVEDMVLSDTAPK---GTQIKRYEDNNT 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + +          L    +    PS+  +   ++  SP    +  G+      V
Sbjct: 175 TLSAYLSGQVQYIATGN--LVVSAIARQNPSKAPVAKFMLKDSPCYVGLRLGEPALQAKV 232

Query: 242 SWTH 245
               
Sbjct: 233 DQLI 236


>gi|291460387|ref|ZP_06599777.1| CjaA protein [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291416954|gb|EFE90673.1| CjaA protein [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 298

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 95/229 (41%), Gaps = 11/229 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S +   + +I+  G ++ G+ T    F  + + G+ +G+DV + R ++  +        
Sbjct: 44  GSASFRTVEEIRNSGVIRIGVFTDKAPFGYIDSKGENQGYDVFYARRIAEDLGVKAE--- 100

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +  L+   R   + + +IDI   N   T  R     + F         G +  + K I S
Sbjct: 101 FTSLDPASRVEYVSTGKIDITLANFTVTKERAE--QVDFALPYMKVALGVVSPEDKEIKS 158

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V +L G ++ +  GTT E      F+ ++ +     ++   +   A    R DA++ D +
Sbjct: 159 VEELKGKTLIIAKGTTAETY----FEKNHPEVKLQKYDAYADAYNALLDGRGDAFSTDNT 214

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            + A       P   V +  +     +A A+ +G+TE  + ++    A+
Sbjct: 215 EVIAWA--KTNPGYVVGIETLGDYDTIAAAVAKGNTELLDFLNEEIRAL 261


>gi|56808073|ref|ZP_00365868.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Streptococcus pyogenes M49
           591]
 gi|71903619|ref|YP_280422.1| histidine-binding protein [Streptococcus pyogenes MGAS6180]
 gi|209559534|ref|YP_002286006.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus pyogenes NZ131]
 gi|71802714|gb|AAX72067.1| histidine-binding protein [Streptococcus pyogenes MGAS6180]
 gi|209540735|gb|ACI61311.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus pyogenes NZ131]
          Length = 278

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K     +      F  +        +    G  +K+  +  G +   V       +G  
Sbjct: 4   KKRTVAILAIASSFFLVACQATKGLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  + +         K+ +  +N   +   L + +ID++      T  R     +
Sbjct: 64  KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QEKV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174
           AF      + Q  ++ K+  I ++S +    +  Q+ ++   +L    K           
Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D            +   + ++P        +  + + 
Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 239 DKTLQAKINRA 249


>gi|256851553|ref|ZP_05556942.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           jensenii 27-2-CHN]
 gi|260660976|ref|ZP_05861891.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           jensenii 115-3-CHN]
 gi|282932201|ref|ZP_06337649.1| glutamine-binding protein [Lactobacillus jensenii 208-1]
 gi|297206368|ref|ZP_06923763.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus jensenii JV-V16]
 gi|256616615|gb|EEU21803.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           jensenii 27-2-CHN]
 gi|260548698|gb|EEX24673.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           jensenii 115-3-CHN]
 gi|281303688|gb|EFA95842.1| glutamine-binding protein [Lactobacillus jensenii 208-1]
 gi|297149494|gb|EFH29792.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus jensenii JV-V16]
          Length = 275

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 96/268 (35%), Gaps = 24/268 (8%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M K     F S   L +L  ++   ++        IK    +  G+      F  +    
Sbjct: 1   MKKFCKWIFASFSLLFLLTLSACQKSSKSLDTYDKIKASQTITWGVKADTRLFGIMNIKT 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
              +GF++D  + LS  +     K+  +   AK +   L++  +D L      T  R+  
Sbjct: 61  SQLEGFEIDLAKDLSKKMLGKNVKVNLVQTTAKTKIPLLRNGSVDALLSTMTITEERKKI 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY 171
             + F    +  GQ  ++ K   + +V  L   G ++    GTT    +  +    N   
Sbjct: 121 --VDFSTPYFNAGQAILVPKNSKLKNVYDLKKRGITVLAVKGTTAVANIKKFAPKAN--- 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   +  +A +A +  A T D   L  +   ++ P    I+    +  P   A+ 
Sbjct: 176 -VSEYDDYGQAFSALKAGQGQALTTDNGILAGIA--DENPG-FKIVGGTFTSEPYGIAVR 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259
           +GDT+  N +          EEL     
Sbjct: 232 KGDTKLRNKLDQAL------EELKADGT 253


>gi|255026869|ref|ZP_05298855.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes FSL J2-003]
          Length = 255

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 82/241 (34%), Gaps = 8/241 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++ L +   +S  +       IKK   +  G++   V       + +  GFD+D  +A
Sbjct: 1   MLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLVGFDIDLAKA 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           + +         ++ P++   +   L++  ID++      T  R+  +   F      + 
Sbjct: 61  VFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA--FSQPYMKNE 115

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEID 183
           Q  +  K   I+  S +   ++  Q G ++   +A   +          P +++  +   
Sbjct: 116 QVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPELYDTFDTAF 175

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R D    D               ++ I+      +  A  + + D E    ++ 
Sbjct: 176 IDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSDKELQTKINE 235

Query: 244 T 244
            
Sbjct: 236 A 236


>gi|238927182|ref|ZP_04658942.1| extracellular solute-binding protein [Selenomonas flueggei ATCC
           43531]
 gi|304437127|ref|ZP_07397089.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|238884964|gb|EEQ48602.1| extracellular solute-binding protein [Selenomonas flueggei ATCC
           43531]
 gi|304369886|gb|EFM23549.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 256

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60
            K   V    L+ L               K+   L+ G +     F         ++GFD
Sbjct: 4   KKLALVLTGALVSLSLLGCGAGG---DQAKQASKLRVGASIDFAPFEFQDEGQKDYQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA++  +  +        +       ALQ+K ID++         R+    +AF  
Sbjct: 61  MDLIRAVAKEMGSEAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--KVAFSD 115

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++    + I S S L G  +  Q GTT      +                 
Sbjct: 116 PYYQSGLTMVVRSDEENIKSFSDLKGHKVAAQIGTTGAKMAKEM-----EGVTVSELNTP 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +A   DA   D        +   + +    L D +S      A+ + +TE   
Sbjct: 171 ADCFMELKAGGVDAVINDRPVN-DYYINQSQATGVKTLADRLSAEDYGIAMAKDNTELQQ 229

Query: 240 IVSWTHYAMVTAEELG 255
            ++     +    E  
Sbjct: 230 KINAALKKLHDNGEYD 245


>gi|154502489|ref|ZP_02039549.1| hypothetical protein RUMGNA_00302 [Ruminococcus gnavus ATCC 29149]
 gi|153796885|gb|EDN79305.1| hypothetical protein RUMGNA_00302 [Ruminococcus gnavus ATCC 29149]
          Length = 276

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K   + +    +             +   +A     ++ +     G +     +  + 
Sbjct: 1   MKKKLALILAGTAMAAMVLAGCGEKNNASGEDAKTAESVEDKKTFTVGFDAEYPPYGYMD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG++ GFD++   A+      +  K    PLN   + + L S  ID +          +
Sbjct: 61  ENGEYTGFDLELAEAVCKLEGWELVK---KPLNWDSKDMELNSGSIDCIWNGFTMNGRED 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKA 166
                 F      + Q  ++ +K GI ++  L+G ++ VQA +     L         K 
Sbjct: 118 ---DYTFSTPYVDNSQVIVVAEKSGIDTLEDLAGKTVGVQAASAALDLLQSEEEGGQKKL 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            +       F          +A   DA   D     A      R   + IL + ++    
Sbjct: 175 ADTFGALNEFADYNTAFTELQAGALDALAID--VGVANYQIKSRGEGYKILDETLNTEQY 232

Query: 227 APAIIQGDTEWYNIVS 242
           A    +G+ E  ++V+
Sbjct: 233 AIGFKKGNQELCDVVN 248


>gi|331702185|ref|YP_004399144.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129528|gb|AEB74081.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus
           buchneri NRRL B-30929]
          Length = 276

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 90/236 (38%), Gaps = 12/236 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             ++L D K+   +  G+      F  +   +   KGF++D  +A++  I     K +++
Sbjct: 30  QKNVLKDDKQTKTITWGVKADTKLFGLMDVRDNQIKGFEIDLAKAMTKQILGKDGKARFI 89

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + ++ R   L++  ID +      T  R     + F    +  GQ  ++     I +V 
Sbjct: 90  QVTSQTRMPLLRNGNIDAIMATMTITPERAK--QVDFSRSYFDAGQAILVKNGSPIKNVK 147

Query: 142 QLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            L+     V    G+ +   +  +          +      +   A ++ + DA T D  
Sbjct: 148 DLNHKGAIVLGVVGSNSVQNIKKFAPKA----RVLQLSDYSQALTALKSGQGDALTTDNG 203

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            LY   ++ + P  + ++    +K P   A+ +G  +  + ++     +  + +  
Sbjct: 204 ILYG--MSIENPG-YSVVGGTFTKEPYGIAVDKGQGQMRDAMNNALTKVENSGQYN 256


>gi|152994486|ref|YP_001339321.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150835410|gb|ABR69386.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 263

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 15/258 (5%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    +    +I   F++ S +A +L DIK R  ++  +      F  V  +   +G 
Sbjct: 1   MKRLTKLLGKTLIIAAGFSALSASADVLQDIKDRNLIRIAVPQDFPPFGSVGTDLKPQGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++  +      I+ +P+ +  R   LQ++++D++  +      RE    + F 
Sbjct: 61  DVDMANYIAKEMGVK---IEIIPVTSANRIPYLQTQKVDLVISSLGKNPEREK--AIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G    K   ++ + +L+  ++ V  G+  +L L           +   FE  
Sbjct: 116 TPYAPFFLGVFGSKDVAVTKIGELADKTVGVTRGSVEDLELEKNAPK---SVNVRRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALY--ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                AY + + +            A +     P    +L D     P    + +G+   
Sbjct: 173 NTTLTAYLSGQVNLIATGNLVAAEIAKRQPQRAPENKFMLKDS----PCYIGMAKGEVAL 228

Query: 238 YNIVSWTHYAMVTAEELG 255
              V+    + + + EL 
Sbjct: 229 QAKVNELIKSALASGELN 246


>gi|89072733|ref|ZP_01159298.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium sp. SKA34]
 gi|89051553|gb|EAR57007.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium sp. SKA34]
          Length = 258

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 88/261 (33%), Gaps = 23/261 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L   +      +         K+   ++ GI      F+  + NG+ KGFD
Sbjct: 1   MKKWILAATLISAMSASVVQA---------KEWKEVRFGIEGAYPPFSWTEPNGELKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     K + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCTQM---QVKCKIVSQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K   +    + L G  I VQ  TT +  L D F         + +   
Sbjct: 107 KYALIPNKFVAKKGTELDFTKEGLKGVKIGVQRATTHDKYLTDNF---GESVEIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E     +A R  +  GD SAL    L  D       +   ++           A+ + D
Sbjct: 164 DEAYLDLKAGRIVSVLGDASALEEGLLNKDGGEGFEFIGPSLTDPKWFGEGFGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    +     A+  + +  
Sbjct: 224 KDLTKKLDEAILALRESGQYK 244


>gi|255745377|ref|ZP_05419326.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262153520|ref|ZP_06028649.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|262167420|ref|ZP_06035127.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
 gi|262191304|ref|ZP_06049497.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
 gi|255737207|gb|EET92603.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262024117|gb|EEY42811.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
 gi|262030647|gb|EEY49282.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|262032800|gb|EEY51345.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
          Length = 258

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 1   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     + + +P +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K      +   L G  I VQ  TT +  + D +         + +   
Sbjct: 107 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 224 KELTEKLDAAITAL 237


>gi|119025524|ref|YP_909369.1| solute-binding protein for glutamate_aspartate ABC transporter
           system [Bifidobacterium adolescentis ATCC 15703]
 gi|118765108|dbj|BAF39287.1| probable solute-binding protein for glutamate_aspartate ABC
           transporter system [Bifidobacterium adolescentis ATCC
           15703]
          Length = 301

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 11/228 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T+    A  L +IKK G LK  + +    F  +  +G   G+D+ F   L+  +    
Sbjct: 46  GVTTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAKDLGVK- 104

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++Y  ++   R   L S ++DI   N   T  R+    + F         G +  +  
Sbjct: 105 --VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENA 160

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ VSQL G ++ +  GTT E      F+ +        +++  +   A    R DA++
Sbjct: 161 EITDVSQLKGKTLIIAKGTTAESY----FEKNEPDVKLQKYDQYADAYNALLDGRGDAFS 216

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D + + A           V +  +  +  +APA+ +G+ E  N ++ 
Sbjct: 217 TDNTEVLAWA--KTNKGFKVGITKLGDEDTIAPAVQKGNKELLNWIND 262


>gi|227329360|ref|ZP_03833384.1| putative amino acid ABC transporter, substrate binding protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 253

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 88/236 (37%), Gaps = 10/236 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +   +L   + S  A  L DI+KRG L+  +      F  V  +   +G+D+D  R L+ 
Sbjct: 1   MGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDIARYLAK 60

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F         G 
Sbjct: 61  EM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRAYAPFFLGV 115

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              K   ++S   L G SI V  G   ++ L D             +E      +AY + 
Sbjct: 116 FGPKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKA---AQIKRYEDNNTTLSAYLSG 172

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + +        + A+      P++  +   ++  SP    + + +      V    
Sbjct: 173 QVEYVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKVDALI 226


>gi|325062524|gb|ADY66214.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 261

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 97/284 (34%), Gaps = 25/284 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++   ++   +   F  S    A  L DI  RG L+  +      F  V A+   +G+D+
Sbjct: 3   FRRTLIAAAAMAAAFGLSAPAKADALADITARGTLRVAVPQDFPPFGSVAADMTPQGYDI 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + ++  +      ++ +P+ +  R   LQ+ ++D++  +      RE    + F   
Sbjct: 63  DVAKMIADKLGVK---VELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKV--IDFSDA 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G        IS    L G +I V  G   +L L     +         +E    
Sbjct: 118 YAPFFNGVFGPADVAISKAEDLKGKTIAVTRGAVEDLELTKVAPS---DATIKRYEDNNG 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +A+ + + +          A+      P +   L  +I  SP    + + +      V
Sbjct: 175 TISAFLSGQVEVVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKNEPALLEKV 232

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           + T  A                 +  + N    ++LG D   ++
Sbjct: 233 NATVAA---------------AKADGSLNAIATKWLGQDLPKDL 261


>gi|307320837|ref|ZP_07600247.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306893547|gb|EFN24323.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
          Length = 280

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   F V+   +  +     +     +S L ++  RG L  G  +    +    A    +
Sbjct: 1   MISKFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  R ++ A+F DP KI+++  ++  R   + + ++DI  +    T  R  +  +A
Sbjct: 61  GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQIA 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y +G   ++      +    L  A   V       +   D   A   +     +E
Sbjct: 119 FTIPYYREGVALMLKADGKYADYDALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYE 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            V+ I  A  + R DA   D S+L            +       +    A  + +GD +W
Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQ--NSGRYKDAGYGWNPQTYACGVRRGDQDW 236

Query: 238 YNIVSWTHYAMVTAEELGI 256
            N V+   +  +T  E   
Sbjct: 237 LNFVNTALHQAMTGVEFDF 255


>gi|290473962|ref|YP_003466836.1| arginine ABC transporter periplasmic binding protein [Xenorhabdus
           bovienii SS-2004]
 gi|289173269|emb|CBJ80044.1| arginine transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus bovienii SS-2004]
          Length = 247

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F ++L  + L  ++ +              L+         F  + AN   +GFD
Sbjct: 1   MKKLLFAALLTAMTLSTSATAAEKET---------LRFATEATYPPFEFIDANNKIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + I    ++  +          +L+ ++ D L    D T   +    + F  
Sbjct: 52  VDLANAICAKI---NTECTFTNQAFDSLIPSLKFRRFDALMAGIDITP--DRRKQVDFTH 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K K   S   L    + +Q GTT +  L +  K        + ++  +
Sbjct: 107 TYYDNSAVFIAIKGKFTHSA-DLKSKQVGIQNGTTHQKYLMEQHKE----IKTVPYDSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD +                +   +  K      L  A+ +G+T 
Sbjct: 162 NAILDLKNGRIDAVFGDTAVANEWL--KKNKELGSVGDKVTDKDYFGIGLGIAVRKGNTA 219

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 220 LLDKLNKAL 228


>gi|116628193|ref|YP_820812.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|116101470|gb|ABJ66616.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
          Length = 276

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 18/254 (7%)

Query: 1   MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   + +  +  L    + S++ + L  +K +G L   +N     F          
Sbjct: 1   MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKNKGTLTVALNPHFAPFEFKTIQDGKD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D++  +A+   +      +++  ++      ++QS + DI       T  R+   
Sbjct: 61  TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116

Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              F    Y      ++ K    K    +S  S  SI VQ G+  E       KA+    
Sbjct: 117 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLSDA 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +   +  E     ++ + +    + +        N   +   I     S    A A+ 
Sbjct: 172 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 231

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 232 KGSDDLKAKVNKII 245


>gi|330977202|gb|EGH77159.1| cystine transporter subunit [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 265

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 9/241 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F ++  ++       +     L  IK  G L  G+      F+ V  +G   GF+V+F 
Sbjct: 11  LFSAMGLMLGAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFS 70

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL+  +       +  P        AL SK++D++      +  R+     +       
Sbjct: 71  EALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPYTVSG 127

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                +   +  I S   L+G  + V  GT  E    ++ KA+        ++       
Sbjct: 128 IQALVLKKNEDAIKSAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDPSKIQ 183

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                R DA   D   L AL++     ++ V   D  S+     A+ +G+ E    +   
Sbjct: 184 DLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAAIDKA 241

Query: 245 H 245
            
Sbjct: 242 I 242


>gi|307300762|ref|ZP_07580537.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306904296|gb|EFN34881.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 271

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 11/243 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   +S+L   I+        A  +  IK  G +K G+      F  + AN    G+D D
Sbjct: 11  RRTAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDAD 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + L+  +  +   +  +P+    R   LQS Q+D+L  +   T  R     + F    
Sbjct: 71  VAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAK--NVDFSQPY 125

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G        ++    L+G +I V   +T +              +   F+     
Sbjct: 126 AGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ---DANIQRFDDDASA 182

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + + +           ++          +    +S+     A+ +G +E    V+
Sbjct: 183 VQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKL---QLSQQVQGIAVRKGSSEMLKFVN 239

Query: 243 WTH 245
              
Sbjct: 240 GFL 242


>gi|110636302|ref|YP_676510.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110287286|gb|ABG65345.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 260

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 94/255 (36%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +L +  L  ++    A  L  I+ RG +   I+T +  +  +  N    G+D
Sbjct: 1   MKQLLCTFMLAVAALVGSAPLAAAQTLEAIESRGKVLIAIDTAVPPYGMLDENMQPVGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +  +   ++ +P+    R   L+S + D++      T  R  +  + F  
Sbjct: 61  VDMAKMIAQDLGVE---LEIVPVTGPNRIAYLESNRADMVISTFGVTPERAKT--VNFTI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +       K +  SS++ LSG  + V  G+  +  +               +E   
Sbjct: 116 PYGANQIWIFGQKGEAASSIADLSGKPVAVVRGSIQDNVVTRMLP----DAVIRRYEDDA 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +             L   +    E  +L  +    P +  + +GD E+ ++
Sbjct: 172 TAATAFLSGQVPFIATGTLIGDKLVARDTENYERKLLLGLN---PYSIGLRKGDLEFLHL 228

Query: 241 VSWTHYAMVTAEELG 255
           ++   Y+     +L 
Sbjct: 229 INTFIYSYRLGGQLN 243


>gi|289811796|ref|ZP_06542425.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 225

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 11/212 (5%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 16  RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 75

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+       +     +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 76  GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 135

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M    
Sbjct: 136 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 193

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           I  +   +      + R  A+  D + L   +
Sbjct: 194 ISAKDHGDSFRTLESGRAVAFMMDDALLAGER 225


>gi|104784004|ref|YP_610502.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas entomophila L48]
 gi|95112991|emb|CAK17719.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Pseudomonas entomophila L48]
          Length = 266

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 85/250 (34%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L          +  A  + D  KRG L+ G++   + F      G+  GF+
Sbjct: 1   MMKKYLSRLLVGATALIAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFEMTNKRGEIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      +            AL + + D +      T  R  +L L F  
Sbjct: 61  VDILKAMAKSMGVKLETVS---TAYDGIIPALLTDKFDFIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 +
Sbjct: 116 PFIVVGQTLLIRKELVGEIKSYKDLNNEKYRITSKLGTTGEMVSKKLIGKAKYHG----Y 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D                   L +  +  PLA  + +GD +
Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVEKAGAGK-LAFLEEPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|296158005|ref|ZP_06840838.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295891773|gb|EFG71558.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 251

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 86/255 (33%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M     +S+ C    +     S + +A           L    +           NG   
Sbjct: 1   MKLQRLLSLACVTFAVTFGGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL+ A+     ++Q+  ++ K     L + + D        T  R     + 
Sbjct: 54  GFDVDLMNALAKAMGK---RVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKV--VD 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G   ++     I +V+ L+G  + VQ GT +   L D F     + + +  E
Sbjct: 109 FTDSYYAGGLAVLVKSDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFP----QINRVEVE 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           + +E+       R DA         A        +   +L   ++      A+ + + + 
Sbjct: 165 KNQEMFDLVGIGRADAAVTGKP---AAYQVAKTRTGFRVLDKTLTTEAYGIAVRKDEPQL 221

Query: 238 YNIVSWTHYAMVTAE 252
               +    A + A+
Sbjct: 222 KAAFNTAL-ARIKAD 235


>gi|282866759|ref|ZP_06275798.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
 gi|282558387|gb|EFB63950.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
          Length = 344

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 81/242 (33%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + S +   +  I++RG L  G++     +          +GFD+D  RAL+  I  
Sbjct: 69  ASLPASSADGPTIQKIRERGKLIAGVDQNSFRWGYRDPETRTLEGFDIDLVRALAKDILG 128

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           D   + +  +   +R  AL+  ++D++ R       R     ++F    +  GQ  +  K
Sbjct: 129 DADAVIFRAIPTNQRIAALEHDRVDVVVRTMTINCGR--LEQVSFSTAYFQAGQQVLAAK 186

Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTLA---------DYFKAHNMKYHPIVFERVEEID 183
           +  I+   + L+G  +C   G+T    L          D  +  +     +      +  
Sbjct: 187 ESDITGYDRSLAGKRVCSAEGSTAYEALKKESFGAVFEDEHEDTDQDPDLLTVPNQLDCL 246

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +           P+  +      +      A   G  +    V+ 
Sbjct: 247 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGDKPFTTEYYGVAAKLGADDLVARVNH 304

Query: 244 TH 245
             
Sbjct: 305 VL 306


>gi|317486283|ref|ZP_07945115.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316922453|gb|EFV43707.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 246

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 20/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++    S+L +++L  ++F+              L    N        +  N +  G+D
Sbjct: 1   MFRTVLTSLLAVLVLCGSAFAAE----------KTLIAAANPTWPPMEFLDENKNIIGYD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   A++  I     K ++  +     F +L+S Q ++++     T  R+      F  
Sbjct: 51  RDIIAAIAEEIG---MKSEFRNIAWDGIFASLESGQANVIASCVTITDKRKK--AYVFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  ++ K   I     L G  + VQ GTT    L       N+      ++ V 
Sbjct: 106 PYYEVHQAVVVAKDSAIKKPEDLKGKKVGVQIGTTAIEALRKM----NVDIDLRTYDEVG 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYN 239
            +    R  R D    D           +   + + +         +     + + E   
Sbjct: 162 LVFEDMRNGRLDVVVCDDPVARYYASRKEGYKDLMKVAFLTEDVEYIGFVFSKDNAELAA 221

Query: 240 IVSWTHYAM 248
            V+    A+
Sbjct: 222 QVNKGLKAI 230


>gi|222086403|ref|YP_002544937.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723851|gb|ACM27007.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 264

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 14/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +   ++ L + +L   S     +  A  L DI  RG ++  +      F  V  +   
Sbjct: 1   MKRRQLLTALGMAMLAMGSLSSPHAARADALSDITSRGTIRVAVPQDFPPFGSVGPDMAP 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D+D    +   +      +    + +  R   LQ+ ++D++  +      R+    +
Sbjct: 61  MGYDIDMANLIGEKLGVKTELVP---VTSANRIPYLQTNKVDLVISSLGKNAERQAV--I 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F         G         +    LSG +I V  G   +L L               +
Sbjct: 116 DFTDAYAPFFNGVFGPADVAATKPEDLSGKTIGVTRGAIEDLALTKVAPQ---DATIKRY 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E      +A+ + + D          A+      P +   +  +I+ SP    + + +  
Sbjct: 173 EDNNGTISAFLSGQVDLVATGNVVAAAILA--KNPPKKPEMKFLITNSPCFIGLNKSEPA 230

Query: 237 WYNIVSWTHYAM 248
               V+    A 
Sbjct: 231 LQKKVNDIIAAA 242


>gi|290956973|ref|YP_003488155.1| glutamate uptake system binding subunit [Streptomyces scabiei
           87.22]
 gi|260646499|emb|CBG69596.1| glutamate uptake system binding subunit [Streptomyces scabiei
           87.22]
          Length = 283

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 5/211 (2%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K GI     G      +G + GFDVD    ++  +  DP +I+++   + +R  AL  
Sbjct: 44  KIKVGIKYDQPGLGLKNPDGSFSGFDVDVATYVAKELGYDPKQIEFVETKSADRENALAR 103

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +  ++        R     + F        Q  ++     IS  + L+G ++C   G+
Sbjct: 104 GDVKFIAATYSINPERAKL--VDFAGPYLLAHQDLLVKADSDISKGTDLNGKTLCSVTGS 161

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T+   +         K     +    E  A  ++   DA T D S L      ++   + 
Sbjct: 162 TSAENVKKDIA---PKAQLKEYGGYSECIAGLQSGAVDAVTTDDSILAGFAAQDNYKGQF 218

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +    +S       + +GD    + ++   
Sbjct: 219 KLAGLKLSNENYGIGVKKGDKATVDKINAAL 249


>gi|227903962|ref|ZP_04021767.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus acidophilus ATCC 4796]
 gi|227868353|gb|EEJ75774.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus acidophilus ATCC 4796]
          Length = 286

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 43/300 (14%)

Query: 1   MY-KDFF---VSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M  K+ F   +SIL ++++  ++            T+AS         +IK+RG+L+  +
Sbjct: 1   MKVKNIFNWTISILAILLVIISAYFGFAQKGLNSGTSASRWSNQNGVSEIKRRGYLRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V +NG   G+DV     ++  +      I+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNSNGKRVGYDVYLAHRMAQDLGVK---IRFVQVNANNRVDTLNSNKADII 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S +QL    + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKSAPITSANQLKNKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
           +          + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 SQ-----QKNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKQNPKYTVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
             K  ++PA+ +G+      ++             IT+ N      +  N +++ + G D
Sbjct: 229 GPKQYISPAVKKGNRSLLKWINK-----------EITKLNKESFFVEDYNKELRPYFGKD 277


>gi|15641865|ref|NP_231497.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587294|ref|ZP_01677066.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121727107|ref|ZP_01680281.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|147673397|ref|YP_001217397.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|153818873|ref|ZP_01971540.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|153823970|ref|ZP_01976637.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|153825196|ref|ZP_01977863.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
 gi|153830549|ref|ZP_01983216.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|183179514|ref|ZP_02957725.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|227081992|ref|YP_002810543.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|229508040|ref|ZP_04397545.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229511721|ref|ZP_04401200.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229515243|ref|ZP_04404703.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
 gi|229518859|ref|ZP_04408302.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229607587|ref|YP_002878235.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254226033|ref|ZP_04919632.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
 gi|254286778|ref|ZP_04961732.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|254848949|ref|ZP_05238299.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|297579381|ref|ZP_06941309.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|298498098|ref|ZP_07007905.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9656393|gb|AAF95011.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548454|gb|EAX58512.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121630485|gb|EAX62877.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|125621416|gb|EAZ49751.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
 gi|126510601|gb|EAZ73195.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|126518507|gb|EAZ75730.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|146315280|gb|ABQ19819.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|148873979|gb|EDL72114.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|149741175|gb|EDM55226.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
 gi|150423205|gb|EDN15152.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|183012925|gb|EDT88225.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|227009880|gb|ACP06092.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|227013761|gb|ACP09971.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|229343548|gb|EEO08523.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229347948|gb|EEO12907.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
 gi|229351686|gb|EEO16627.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229355545|gb|EEO20466.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229370242|gb|ACQ60665.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254844654|gb|EET23068.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|297536975|gb|EFH75808.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297542431|gb|EFH78481.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 260

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 3   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     + + +P +      +L +++ D +      T  R+    + F  
Sbjct: 54  VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K      +   L G  I VQ  TT +  + D +         + +   
Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 226 KELTEKLDAAITAL 239


>gi|242279193|ref|YP_002991322.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242122087|gb|ACS79783.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 271

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 20/250 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     + +L L      + +       S L  I K G L+CGI +G + F      G
Sbjct: 1   MKRICMMLIMVLALGFAATANAADIDLAKKSTLNSILKSGELRCGIASGYIPFQMTDKKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF++D  R ++ A+      +    +       AL + +IDI++        R  +L
Sbjct: 61  RIVGFEIDLAREMAKAMGVKFVPVN---MEFDGIIPALLTNKIDIITAGMTVNQER--NL 115

Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMK 170
            + F       GQ  +++KK    I S   L+     + +   TT E     +      K
Sbjct: 116 QINFAEPFMVVGQTVLLNKKLEGKIKSYKDLNKPEYTIVSKLGTTGEQAAKRFIPKAKYK 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                F+   +        + DA   D+                V L +  +  PL   I
Sbjct: 176 ----SFDLETDAALEVLNGKADAMIYDLPFNAIFMAEQGEGK-LVFLDEPFTYEPLGWGI 230

Query: 231 IQGDTEWYNI 240
            +GD ++ N 
Sbjct: 231 SKGDPDFLNF 240


>gi|289435591|ref|YP_003465463.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289171835|emb|CBH28381.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 486

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 24/279 (8%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K+F   +  + ++F           +       L  I+++G L  G++     +    
Sbjct: 1   MQKNFLQKLAAIALVFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K      +SV+  +G  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++     +++ DA   +     A    +   +   I  +  SK   
Sbjct: 174 --VGSDVVSLQKVPDLLLNLSSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFENGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIALPKGSTALQEKVNASIKEIQDTGLLKEYQKEANKLM 269


>gi|223999121|ref|XP_002289233.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974441|gb|EED92770.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 871

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 70/329 (21%), Positives = 132/329 (40%), Gaps = 48/329 (14%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  +++RG+++CG+              + + F  D CR++++ +  DP  I    ++ 
Sbjct: 357 TLAIVQERGYVRCGLFQ---------KKTEARNFRRDLCRSVAAVVLLDPDSIIETDVHV 407

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISL-----GLAFRPITYFDGQGFIMHKKKGI--- 137
             RF  L  + +D+L+    +TL RE++      G +F    Y+DG  F  +        
Sbjct: 408 NNRFPMLYDRAVDLLAAGETYTLEREVNEPTTGAGFSFTTPYYYDGMVFGGNSTSVYCAE 467

Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
                 + +   ICVQ  TT    ++  F A            + E    +   +C+A+ 
Sbjct: 468 ERKRYDECANLKICVQESTTHYSYVSANFAAGFYT----SVRSLSESAVFFLQDKCNAFA 523

Query: 196 GDIS--ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           G+                +  VI     +  PL+ A    D EW +IV+W   A++  EE
Sbjct: 524 GERMEILSSVSIQNLTETNAVVIGNKTYTSEPLSIATRNDDQEWSDIVNWVIQALIFGEE 583

Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313
            G+ +   + + +++T         I  ++N G             +  +GNYG++F RN
Sbjct: 584 NGLVKN--SSLCENST---------IVDTTNTGLNF-------LNSVYCVGNYGQLFARN 625

Query: 314 LGNQSELKIPRGYNALWSKG-GLMYAPPI 341
             +     + R      ++G G++Y  P 
Sbjct: 626 HED----PMDRSQMNEVNQGTGMLYVIPF 650



 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 57/229 (24%), Gaps = 42/229 (18%)

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F       G      K   +S+     G   C    ++        F  +    +
Sbjct: 657 HGAKPFTGGQLNCGVVIQNDKYHNVSN----MGIDYCSTLASS-------MFDGNVYAVN 705

Query: 173 PIVFERVEE--IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--- 227
             VF   EE          R D   G  +                               
Sbjct: 706 VTVFSEDEEERAYLELDKRRLDVLVGVRATQNYDFEDLPSRRGLTFSSPYFYGDESGEVD 765

Query: 228 -----PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282
                    + D  + + V+    + + A E  IT++   Q+   T         G +  
Sbjct: 766 VSFFPMVTREDDVLFSSFVNCIVLSTLYAAENAITKEVYVQMPLIT-------IFGNEYL 818

Query: 283 SNIGEALGLTKDWTYR-IIRHMGNYGEMFDRNLGNQS-ELKIPRGYNAL 329
                       W  R  I   GNY EM++++ G         R  NAL
Sbjct: 819 ------------WALRDAISANGNYDEMYEKHFGIGKDSDPTSRARNAL 855


>gi|319761801|ref|YP_004125738.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|330826339|ref|YP_004389642.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|317116362|gb|ADU98850.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|329311711|gb|AEB86126.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 253

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 80/250 (32%), Gaps = 26/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L L+ L   + + +            L+ G+N     F    A+G+  GFD
Sbjct: 1   MQKKI--AALALVGLAGAACAAD------------LRVGLNPAYEPFESKTASGEIVGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I     K  ++          LQ+K+ D++  +   T  R     + F  
Sbjct: 47  VDIANALCEQI---KRKCVFVESEWDSIIPGLQAKKFDVVISSMSITPERARV--VDFTN 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ K       + L G  I V   +T E       K        + ++   
Sbjct: 102 RYYKTPSAIVVKKSVKYEGPASLKGMKIGVLKSSTQEKWALGELKPAG--VTVVPYQSQN 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDT 235
           ++    +A R D    D   +    L      ++  +             +  A+ +G  
Sbjct: 160 QVYLDIQAGRLDGTVADKVEVNGGFLRKPEGKDYGYVGPDQYDAKYYGEGIGIALRKGQG 219

Query: 236 EWYNIVSWTH 245
           +    ++   
Sbjct: 220 DLKKQLNEAI 229


>gi|139439228|ref|ZP_01772670.1| Hypothetical protein COLAER_01684 [Collinsella aerofaciens ATCC
           25986]
 gi|133775252|gb|EBA39072.1| Hypothetical protein COLAER_01684 [Collinsella aerofaciens ATCC
           25986]
          Length = 286

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 9/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L  G +     +  V  +G++ GFD+D  +A++     +   ++Y  ++   +   
Sbjct: 51  ESKKLVVGFDKSYPPYGFVGDDGEYTGFDLDLAKAVADKQGWE---VKYEAIDWDAKDTL 107

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S  I+ +          +      F      + Q  ++ K  GI     L+G ++  Q
Sbjct: 108 LNSGAINCIWNGFTMEGRED---DYTFSEPYMLNEQVLVVKKDAGIKGWDDLAGKTVITQ 164

Query: 152 AGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             +  +  L  D                         +   DA   D+S   A      +
Sbjct: 165 TDSAAQDVLEGDQKDLAATFATLDTIGEYNTAFMQLESGAVDAVACDLSI--AQYQLAAK 222

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           P  +  L + +S    A    +GDT+  + V+ +  A+  
Sbjct: 223 PDAYTQLDEPLSSEHYAVGFKKGDTKSADAVAESLKALYE 262


>gi|318059839|ref|ZP_07978562.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actG]
 gi|318077304|ref|ZP_07984636.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actF]
          Length = 354

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 10/227 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +++     + RG L  G         E    +G + GFD++  + +++ +    ++I + 
Sbjct: 102 DSATWRKARARGRLVVGAKEDQPYLGEKDPASGRYSGFDIEIAKMVAAGLGFPANRISFR 161

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  +LQ+ QID           R+  +G  F    Y  GQG ++ K   GI   
Sbjct: 162 TIASANRETSLQNGQIDYYVGTYTINDNRKKLVG--FAGPYYMAGQGLLVRKDEDGIKGP 219

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L G  +C  AG+T    +   +         + ++           ++ DA T D S 
Sbjct: 220 ADLDGKRVCSAAGSTPYQRIQHDYPKA----DLVSYDTYSICVDNLLTYQVDAVTTDDSI 275

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           L         P E  ++    S+ P    + + D      +     A
Sbjct: 276 LLGYAAKV--PEELKVVGKPFSEEPYGIGVPRKDNALRLAIDGILAA 320


>gi|86742202|ref|YP_482602.1| extracellular solute-binding protein [Frankia sp. CcI3]
 gi|86569064|gb|ABD12873.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Frankia sp. CcI3]
          Length = 296

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 9/228 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           T  + +  +   G +  G       F     +G  +GFDV+  + ++ A+     K+ Y+
Sbjct: 45  TAGTTMARLHDAGKIIIGTKFDQNLFGLKNLSGQPEGFDVEISKIVTDALGIPRDKVSYV 104

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
              +  R   +Q  ++D++         R+    + F    Y  GQ  ++ K     +  
Sbjct: 105 ETVSANREPFIQQGRVDLVVATYTINDKRKKV--VDFAGPYYVSGQSIMVSKNNTDITGK 162

Query: 142 Q-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  +C  +G+T    +             ++F+   +   A +  + DA T D   
Sbjct: 163 DTLAGKKVCSVSGSTPAENIRRVAPTA----QLVLFDVYSKCADALKNGQVDAVTTDKGI 218

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L  L   +  P    ++    +K P    + +GD  + N ++ T  A 
Sbjct: 219 LLGL--VDKDPDAFKVVGGTFTKEPYGIGLKKGDDAFRNFINDTLEAA 264


>gi|303229869|ref|ZP_07316645.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-134-V-Col7a]
 gi|303232048|ref|ZP_07318751.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513154|gb|EFL55193.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302515425|gb|EFL57391.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 269

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 79/256 (30%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60
            K    S++ ++         ++S          L  G N   V F         + GFD
Sbjct: 7   KKLVLGSLMVVMAASLVGGCGSSST---TTSNKKLIVGTNATFVPFEFKDDKTQDYAGFD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+   I  D   ++   +       AL +  ID+ +     T  R  S  + F  
Sbjct: 64  IDLIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLFSS 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    +      I S+  L    I  Q GTT                    F+   
Sbjct: 119 PYYENALAIVYKDSNSIHSLDDLKNKKIAAQMGTTGSDLAHKI-----EGTSVKEFDHSN 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYN 239
           E     +    DA   D+    A   +   P EH  ILP   +K  L  A+ + +     
Sbjct: 174 EALLELQNGGVDATVIDLP--VAQYYSTKHPDEHIQILPYPNTKEYLGLALNKDNKALQE 231

Query: 240 IVSWTHYAMVTAEELG 255
            ++     M    E  
Sbjct: 232 EINKAIADMKADGEFN 247


>gi|300697547|ref|YP_003748208.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074271|emb|CBJ53816.1| putative amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 280

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67
           +  L  L   SF   A    +I+K   L+CG    +  FA       +  GFDVD C AL
Sbjct: 10  LTVLACLCSASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCNAL 69

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +       +  PL+ + R   ++  ++D+   N  +TL R   +   F    Y   +
Sbjct: 70  AKRMGVTA---KITPLSVEARVPEVKMGRVDVTVANLAYTLSRAEQIQ--FSDPYYLAKE 124

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              +       S +   G  +    G+T+EL++            P+ F+       A +
Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178

Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +      +   +  L   +     E  ++ + +   P+   + +G+ +    V+    
Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238

Query: 247 AMVTAEELG 255
           AM  A E+ 
Sbjct: 239 AMDKAGEIN 247


>gi|293572977|ref|ZP_06683920.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E980]
 gi|291606955|gb|EFF36334.1| amino acid ABC transporter, amino acid-binding protein
           [Enterococcus faecium E980]
          Length = 260

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 8/237 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +A     I +   +  G++   V       +G   GFD+D  +A+          + + 
Sbjct: 25  ASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---ITVDFQ 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P++   +   L +  ID++      T  RE    + F      + Q  I  K+ GI+S  
Sbjct: 82  PIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQFTKPYMENDQVLITPKESGITSFE 139

Query: 142 QLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           Q+    +  Q G++         +  K        ++++   E     ++ R D    D 
Sbjct: 140 QMKNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAVLYDSFNEALIDLKSGRIDGLLMDK 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                     +   +  +          A  + + D      ++     +    E  
Sbjct: 200 VYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTLVKKINEAFDRLEKTGEFQ 256


>gi|126179307|ref|YP_001047272.1| extracellular solute-binding protein [Methanoculleus marisnigri
           JR1]
 gi|125862101|gb|ABN57290.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanoculleus marisnigri JR1]
          Length = 257

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 91/266 (34%), Gaps = 18/266 (6%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      + C++ +   + +       +         GI+     F+ +  +G+ +GF
Sbjct: 1   MKKYGILTLLACIVAVLAVAGAGCTGTTTEP----DYVVGIDGAYPPFSYIDKDGNAQGF 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++     +   + ++ ++       LQ+ +ID++      T  R     + F 
Sbjct: 57  DVDSMKWIAEKKGIE---VTFMAVDWDAIIPTLQAGKIDMVYAGMSITPER--LEKVNFS 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNM--KYHPIVF 176
              +   Q  +  +   ++    L+G   I VQ G T  + + +         K +   +
Sbjct: 112 NPYWSINQDVVAREDSNVTLDDVLAGKAIIGVQRGCTAAIWIEENLVETGKMSKDNLRYY 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                  +     R DA   D  ++    +   +P + +   +   +     AI + DT 
Sbjct: 172 PDTPAAVSDLEIGRIDAVMYDDVSI--QDIIAGKPLKTIGSVETQEQEQFGVAIRKEDTA 229

Query: 237 WYNIVSW---THYAMVTAEELGITQK 259
               ++       A    EEL     
Sbjct: 230 LLEFMNEGIAELQADPYWEELKEKHN 255


>gi|296127371|ref|YP_003634623.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
 gi|296019187|gb|ADG72424.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
          Length = 275

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 84/262 (32%), Gaps = 22/262 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF-------------STNASILGDIKKRGFLKCGINTGLVGF 47
           M +     +L    +  +               ST  + L  +K  G L  G++      
Sbjct: 1   MKRILTFLLLAFFAVIISCNNNSGSANNNAAPESTEDNSLQKVKDAGKLVLGLDDTFAPM 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                NG+  GFD+D  + ++S +  +   ++  P+      L+L    +D+L       
Sbjct: 61  GFRDENGEVVGFDIDLAKEVASRLGVE---LEIKPIEWSSSILSLNKGDVDVLWNGVTIN 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKA 166
             R     + F      +    +       I+S   LSG  + VQ G+  E   AD   +
Sbjct: 118 DAR--KQQINFSKPYLNNRLVIVKAIDDAAINSKDDLSGKVLGVQVGSNDEALTAD--PS 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                    ++         +A R DA   D  A     ++  +    V+    +++   
Sbjct: 174 SKDAKEIRRYDVNVNAFLDLQAKRIDAVIIDEVA-AQYYISEKKAPFVVVDNSPLTEELY 232

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
                + D +    V      M
Sbjct: 233 GVGFRKSDEKLLAEVDRILDEM 254


>gi|169826264|ref|YP_001696422.1| amino-acid ABC transporter extracellular-binding protein yqiX
           [Lysinibacillus sphaericus C3-41]
 gi|168990752|gb|ACA38292.1| Probable amino-acid ABC transporter extracellular-binding protein
           yqiX precursor [Lysinibacillus sphaericus C3-41]
          Length = 263

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 88/264 (33%), Gaps = 19/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKA-NG 54
           M    F+ IL L I    +        N S       +  LK G +     F  V A  G
Sbjct: 1   MKNKLFMMILVLAIGVLAACGAKEDDANNSNADSSTDKQVLKVGTSADYAPFEYVDAAKG 60

Query: 55  D-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           +   GFD+D  + +   I  D   +Q   ++      ALQ+ +ID++         RE  
Sbjct: 61  EEIIGFDIDLIKLVGEKIGVD---MQVQDMDFNSLVPALQAGKIDVVISGMTPNPEREKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F        Q  I+ K  GI   + L+G  + VQ  +  E    +  K  ++    
Sbjct: 118 --VDFSDQYNETEQVIIVKKDSGIKKEADLAGKKVGVQTASIQENLGNEIAKKVDVSVEG 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                  EI     + R DA   +         TND+ +   +         +A      
Sbjct: 176 RTRI--PEIIQDMMSKRLDAGILEGGVAKGYLKTNDQLAAFPVEEQPEDFKAIAV---PK 230

Query: 234 DTEWYNIVSWTHYAMVTAEELGIT 257
            +     ++     +  AEE  I 
Sbjct: 231 GSNLKEKINKALKEL--AEEGKIQ 252


>gi|320546646|ref|ZP_08040958.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
 gi|320448701|gb|EFW89432.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
          Length = 280

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 78/255 (30%), Gaps = 15/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKANG 54
            K    +++ +  +   +  +++S             K G +  G +   V       +G
Sbjct: 4   KKILLSALVLVSTVALAACGSSSSKKVSNTDQWDSYVKDGKITIGFDNTFVPMGYEDEDG 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   A+ +       K+++  +N   +   L +  ID++      T  R  S 
Sbjct: 64  KNVGFDIDLANAVFAEYG---IKVKWQSINWDMKETELNNGTIDLIWNGYSITDER--SE 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171
            + F      + Q  +  K   I+S + + G  +  Q+G++         K         
Sbjct: 119 KVRFTNPYMINEQVLVTKKSSDITSFAGMKGKVLGAQSGSSGYDAFNANPKVLKNIVSGG 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   +     +  R D    D               ++ I+         A    
Sbjct: 179 DATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDKYNIISSEFDGEDFAVGAR 238

Query: 232 QGDTEWYNIVSWTHY 246
           + D      ++    
Sbjct: 239 KADKTLVKKINQAFQ 253


>gi|303257202|ref|ZP_07343216.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|331000693|ref|ZP_08324344.1| glutamine ABC transporter periplasmic protein [Parasutterella
           excrementihominis YIT 11859]
 gi|302860693|gb|EFL83770.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|329570608|gb|EGG52326.1| glutamine ABC transporter periplasmic protein [Parasutterella
           excrementihominis YIT 11859]
          Length = 253

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 84/258 (32%), Gaps = 19/258 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58
           M++   ++ LC + +   S S   +  + D    G L  G ++    F  +  +G  + G
Sbjct: 1   MFRRNLLAFLCALSMLPVSASFAKSPTIED----GVLLVGTDSSFAPFEFLAEDGKNFTG 56

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  RA+   +      +    +       AL++  +D +         R+    + F
Sbjct: 57  FDMDLIRAIGKELGYK---VVVQNMGFDATVPALRTGIVDAVIAGMTINEKRKKF--VDF 111

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   ++        S+  L G  I  Q GTT          A       + F 
Sbjct: 112 SDPYYTSGLIIMVPSSDTTTKSIKDLEGKKIGAQVGTTGMFRAEKVPGAK-----VVTFA 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E    ++    DA   D   +              ++   +       A+ +G+ E 
Sbjct: 167 NAAETFLEFQNGGVDAVIQDFPVVAYYVAQGGNKG--RLVGPKMEAEEYGIAVTKGNKEL 224

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++    ++  + E  
Sbjct: 225 VAQINKALASLKKSGEFQ 242


>gi|317046638|ref|YP_004114286.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316948255|gb|ADU67730.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 279

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 92/250 (36%), Gaps = 15/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M +   + +  L +L  +  S +A ++ +IK  G LKC + + +  F+          G 
Sbjct: 3   MKRRTTIGLALLPLLAIS--SAHADLMANIKSSGELKCAVYSDVPPFSSPDPQTRQLAGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C AL+  +      +  +P + + R   + + + D+L  N  +T  R     + F 
Sbjct: 61  DVDLCNALAKQMGVK---VTLVPTSVEARIAVIATGRADVLIANLAYTKTR--GSQIQFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  ++        +S   G  I    GTT+E ++      H      + F+  
Sbjct: 116 DPYYVAKEMLLVKAPLADKPLSYFKGKRISATKGTTSEQSI------HLKGARAVTFQDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A   ++   +  +      +         +  ++ + ++  P+   + + +    
Sbjct: 170 ASAFLAVEQNKALGFVTNTMTGIKMITQAKKDGIDLAMIKEPMALEPIGVGMKRDEPALL 229

Query: 239 NIVSWTHYAM 248
             V+    AM
Sbjct: 230 TSVNSGLKAM 239


>gi|227552458|ref|ZP_03982507.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium TX1330]
 gi|257896808|ref|ZP_05676461.1| extracellular solute-binding protein [Enterococcus faecium Com12]
 gi|293378563|ref|ZP_06624726.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium PC4.1]
 gi|227178404|gb|EEI59376.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium TX1330]
 gi|257833373|gb|EEV59794.1| extracellular solute-binding protein [Enterococcus faecium Com12]
 gi|292642892|gb|EFF61039.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium PC4.1]
          Length = 271

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 8/237 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +A     I +   +  G++   V       +G   GFD+D  +A+          + + 
Sbjct: 25  ASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---ITVDFQ 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P++   +   L +  ID++      T  RE    + F      + Q  I  K+ GI+S  
Sbjct: 82  PIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQFTKPYMENDQVLITPKESGITSFE 139

Query: 142 QLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           Q+    +  Q G++         +  K        ++++   E     ++ R D    D 
Sbjct: 140 QMKNKRLGAQNGSSGYDVFTKQPEVLKERVKNQDAVLYDSFNEALIDVKSGRIDGLLMDK 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                     +   +  +          A  + + D      ++     +    E  
Sbjct: 200 VYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTLVKKINEAFDRLEKTGEFQ 256


>gi|312963772|ref|ZP_07778243.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
 gi|311281807|gb|EFQ60417.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
          Length = 261

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 94/274 (34%), Gaps = 14/274 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +     A+ L DI  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            ISS   L G +I V  G   ++ L         +     FE  
Sbjct: 116 KAYAPFYLAVFGPPDAAISSTDDLKGKTISVTRGAIEDIELTAVAPK---EATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + + +     
Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            V+    A      L    KN  Q  K+    D+
Sbjct: 231 KVNQILVAAKADGSLE---KNAMQWLKEPLPKDL 261


>gi|229529114|ref|ZP_04418504.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
 gi|229332888|gb|EEN98374.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
          Length = 260

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 3   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     + + +P +      +L +++ D +      T  R+    + F  
Sbjct: 54  VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K      +   L G  I VQ  TT +  + D +         + +   
Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 226 KELTEKLDAAITAL 239


>gi|238752741|ref|ZP_04614211.1| Cystine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
 gi|238709072|gb|EEQ01320.1| Cystine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
          Length = 253

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +  + L             +L  +K+RG L  G+      F+    +G   GF+VDF  A
Sbjct: 1   MVAVALATGLNVKSYAAGDLLDQVKERGVLVVGLEGTYPPFSFQGEDGKLTGFEVDFANA 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +       +  P        +L+SK+ID+       +  R+      F       G
Sbjct: 61  LAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFSTPYTVSG 115

Query: 127 QGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              +  K      +    L G  + V  G+  E  L +  K          ++       
Sbjct: 116 IQVLTKKGNEGQFNKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKYQ 171

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L               ++     A+ + + E    ++  
Sbjct: 172 DLRVGRTDAILVDR--LAALDLVKKTGGTLAAAGPAFARQESGVALRKNNPELLAAINQA 229

Query: 245 H 245
            
Sbjct: 230 I 230


>gi|254387161|ref|ZP_05002431.1| sugar-binding protein [Streptomyces sp. Mg1]
 gi|194345976|gb|EDX26942.1| sugar-binding protein [Streptomyces sp. Mg1]
          Length = 330

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 16/254 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            + +   +  I+  G L  G++     +     +G   GFD+   +A++  I  D SK+ 
Sbjct: 75  STVDGPTIERIRSAGKLVAGVDQNSFKWGYRNPDGHLDGFDIALVKAIAKDILGDESKVI 134

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  +   +R  ALQ+ ++D++ R       R     +AF    +  GQ  ++ K   I+ 
Sbjct: 135 YRAIPTSQRIPALQAGRVDVVVRTMTINCKR--LEDVAFSTAYFEAGQQVLVPKGSTITG 192

Query: 140 VSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L G  IC  AG+T E  L     + +    P+      +     +    D    D 
Sbjct: 193 YDASLKGRKICFAAGSTAEAALT----SRSYGSVPVTVPNQLDCLVRLQLGEVDGIITDN 248

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           +        +       ++    +K     A+ +  T+    V+         E      
Sbjct: 249 ALAAGQAAQDP---SVQLVGSPFTKEFYGVAMNKDATDLVRRVNKVL------ENYRAGG 299

Query: 259 KNINQVSKDTTNPD 272
            +   +     + +
Sbjct: 300 NDSPWMVAYRAHFE 313


>gi|91778079|ref|YP_553287.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91690739|gb|ABE33937.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 251

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 86/255 (33%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M     +S+ C    +     S + +A           L    +           NG   
Sbjct: 1   MKLQRLLSLACVTFAVTFGGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL+ A+     ++Q+  ++ K     L + + D        T  R     + 
Sbjct: 54  GFDVDLMNALAKAMGK---RVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKV--VD 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G   ++     I +V+ L+G  + VQ GT +   L D F     + + +  E
Sbjct: 109 FTDSYYAGGLAVLVKSDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFP----QINRVEVE 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           + +E+       R DA         A        +   +L   ++      A+ + + + 
Sbjct: 165 KNQEMFDLVGIGRADAAVTGKP---AAYQVAKTRTGFRVLDKTLTTEAYGIAVRKDEPQL 221

Query: 238 YNIVSWTHYAMVTAE 252
               +    A + A+
Sbjct: 222 KAAFNTAL-ARIKAD 235


>gi|307130478|ref|YP_003882494.1| amino acid ABC transporter periplasmic binding protein [Dickeya
           dadantii 3937]
 gi|306528007|gb|ADM97937.1| amino acid ABC transporter periplasmic binding protein (precursor)
           [Dickeya dadantii 3937]
          Length = 278

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 95/244 (38%), Gaps = 13/244 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
           +S +    + FTS    A +L D+  RG LKC + + +  F+   AN     G DVD C 
Sbjct: 6   LSAVLASSVLFTSIGAQADLLADMTARGELKCAVYSDVPPFSSPDANTRQLVGMDVDLCN 65

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL+  +     K+  +P + + R   + + + D+L  N  +T  R     + F    Y  
Sbjct: 66  ALAKQMG---LKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTR--GNQIQFSDPYYVA 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            +  ++ K+    ++    G  I    GTT+E ++      +      + F+       A
Sbjct: 121 KEMLLVKKENADKTLEYFKGKRISATKGTTSEQSI------NLKGGKAVTFQDSASAFLA 174

Query: 186 YRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              ++   +  ++     +         E  ++ + ++  P+   + + +      V+ +
Sbjct: 175 LEQNKAVGFVTNMMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALLAAVNTS 234

Query: 245 HYAM 248
              M
Sbjct: 235 LKTM 238


>gi|229523882|ref|ZP_04413287.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
 gi|229337463|gb|EEO02480.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
          Length = 260

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 3   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     + + +P +      +L +++ D +      T  R+    + F  
Sbjct: 54  VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K      +   L G  I VQ  TT +  + D +         + +   
Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVRIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 226 KELTEKLDAAITAL 239


>gi|237798051|ref|ZP_04586512.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331020902|gb|EGI00959.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 265

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 75/245 (30%), Gaps = 10/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S L L++    +        L  IK  G L  G+      F+ V  NG   GF+
Sbjct: 7   RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL+SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALESKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S   L G  + V  GT  E  L +             ++   
Sbjct: 124 TISGIQALVLKKNADAIKSADDLKGKKVGVGLGTNYEQWLKEKVP----GAIVRTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R D    D  A   +          V      S+     A+ +G+ E    
Sbjct: 180 TKIQDLSVGRIDVILVDRLAALEMATKTKNK--LVPAGVAFSRQESGIAMRKGEPELQAA 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 IDKAI 242


>gi|91782144|ref|YP_557350.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia xenovorans LB400]
 gi|296162005|ref|ZP_06844804.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|91686098|gb|ABE29298.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295887749|gb|EFG67568.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 267

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 11/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + +  ++L   +L  T+ + +A  L +I K G LK  +      F  V A+   +G+D+
Sbjct: 10  RRAWLAALLLSPVLAITAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDI 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L+ ++     K++ +P+N+  R   LQ+ ++D++  +   T  RE    + F   
Sbjct: 70  DTAALLAKSM---NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKV--IDFSTA 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                QG        +S  + L+G ++    G   E+ L               FE    
Sbjct: 125 YAPYYQGVFGPADIKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNA 180

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA+ + +            A+      P        +I  SP    + + +      V
Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238

Query: 242 SWTH 245
           +   
Sbjct: 239 NAAI 242


>gi|78066165|ref|YP_368934.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia sp. 383]
 gi|77966910|gb|ABB08290.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 264

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 86/257 (33%), Gaps = 18/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      G+  
Sbjct: 1   MKIALLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +        ++          LQ+ + D+++     T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I          S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRNDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHYAMVTAE 252
           ++   +     A + A+
Sbjct: 229 KFQKAIDDAM-AQLEAD 244


>gi|222081074|ref|YP_002540437.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725753|gb|ACM28842.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 275

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 12/248 (4%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M         I     L  ++ S   S L  I +   L+CGI            N + +G
Sbjct: 1   MKNTILKTAMIATAFSLTLSAHSYAQSALDTIVQSKKLRCGIMLDSPPAGFRNTNNEPEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV +C+ +++A+  +P  ++     + +R  AL S +ID+L  +T  T  R  +L +AF
Sbjct: 61  FDVVYCKDMAAALGAEPEIVE---TPSPDRIPALVSNRIDVLIASTTPTPKR--ALTVAF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 +  G +  K  GI + + LS   +    G+T E  L     A+  K     +  
Sbjct: 116 TQPYMNNTMGVVTRKDTGIKAYADLSSKKLGGVVGSTPEQLLNKEL-ANGWKDKGATYTG 174

Query: 179 V---EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                E   A +  + DA         AL  +   P E VI  +      ++ A+ + D 
Sbjct: 175 YSTDAEAYLALQQGKVDAILVSFGVFNALAQSGQFP-EFVIAGEAPLSDMVSIAVRRDDQ 233

Query: 236 EWYNIVSW 243
           +  N    
Sbjct: 234 QMLNWAKM 241


>gi|295396899|ref|ZP_06807023.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
 gi|294974833|gb|EFG50536.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
          Length = 484

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 7/210 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G++           +G+  GFD+D   A++     +   +++ P++   +   L S
Sbjct: 40  TYVIGLDDTFAPMGFRDGSGELVGFDIDLANAVADLYGWN---LEFQPIDWVMKETELNS 96

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             ID++      T  RE    + F       GQ  I  K   I  +S L+G +I  Q+G+
Sbjct: 97  GNIDMIWNGYGITPEREEM--VLFSEPYIESGQMVISKKGSDIDELSDLAGKTIATQSGS 154

Query: 155 TTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           T+   + ++     + +   P+++    E+ A   A R DA                   
Sbjct: 155 TSLTFMQEWPDDLYNQLADEPVLYPSYNEVFADLDADRVDAIYAGDIYSRYTLNQKGTLD 214

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           E+    D  S  P+     + DT     V 
Sbjct: 215 EYEYFVDETSIEPMGVGFRKSDTALKEQVD 244


>gi|290893601|ref|ZP_06556583.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J2-071]
 gi|290556803|gb|EFD90335.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J2-071]
          Length = 486

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 106/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV   + ++  +     K++   +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAKKIAKDL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269


>gi|330971844|gb|EGH71910.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 261

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            I  ++ L G +I V  G   ++ L++             FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPIKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     +   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPAMKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAM 248
            V+    A 
Sbjct: 231 KVNEILNAA 239


>gi|330965547|gb|EGH65807.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 261

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L+              FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E  +
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLS 230

Query: 240 IVSWTHYAM 248
            V+    A 
Sbjct: 231 KVNEILNAA 239


>gi|257054837|ref|YP_003132669.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Saccharomonospora viridis DSM
           43017]
 gi|256584709|gb|ACU95842.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Saccharomonospora viridis DSM
           43017]
          Length = 278

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 91/260 (35%), Gaps = 12/260 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANGDW 56
           M +   +  + ++     + S   +    I  R    G L  GI     G AE   +G+ 
Sbjct: 3   MRRLRCLVNVVVVSALLAACSATEAAPDSIVTRASDTGSLTIGIGVDQPGLAERTMDGNV 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD D  R +++ +      I +    A ER  AL S ++D++      T  R+    +
Sbjct: 63  VGFDADVARFVAAELGVPEGNITWKETLASEREKALASGEVDLVVAAYSVTERRQR--EV 120

Query: 117 AFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +F            I      ++  + L+G ++C   G+T+   +   F         + 
Sbjct: 121 SFAGPYLEVGQDLLIHRNSTHLTDPAALAGHTVCSPTGSTSAAHVRKRF---GDAVRLVE 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           + RV E   A  A R DA   D + L       + P    +     +       + + D 
Sbjct: 178 YPRVSECVTALLAQRVDAVATDDAILAGYVA--ENPELLRLAGHRWAVENYGIGLPKNDR 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +    V+     M+ +    
Sbjct: 236 DGQAAVNDAIRTMIDSGSWR 255


>gi|325956804|ref|YP_004292216.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           acidophilus 30SC]
 gi|325333369|gb|ADZ07277.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           acidophilus 30SC]
          Length = 289

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 65/300 (21%), Positives = 116/300 (38%), Gaps = 43/300 (14%)

Query: 1   MY-KDFF---VSILCLIILFFTS------FSTNASILG----------DIKKRGFLKCGI 40
           M  K+ F   +S+L +I++  ++         N+  L           +IK+RG+++  +
Sbjct: 1   MKDKNIFNWIISVLAIILVVVSAYFGFTQKGLNSGTLASRWNSQNGVSEIKRRGYIRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V ++G   G+DV   R ++  +      I+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNSDGKRVGYDVYLARRMAKDLGVK---IRFVQVNANNRVDTLNSNKADIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + +         G I  K   I S SQL    + V  GTT E   
Sbjct: 118 LANFTVTPERKEV--VDYAKPYMKVSVGVISPKSAPIKSASQLKNKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                      + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 T-----KQGNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKQNPKYTVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
             K  ++PA+ +G+       +             IT+ N      +  N +++++ G D
Sbjct: 229 GPKQYISPAVKKGNRSLLRWANR-----------EITKLNKESFFVEDYNKELRQYFGKD 277


>gi|325274871|ref|ZP_08140884.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
 gi|324099988|gb|EGB97821.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
          Length = 266

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +       +  A  + D  KRG L+ G++   + F      G+  GF+
Sbjct: 1   MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      +            AL + + D++      T  R  +L L F  
Sbjct: 61  VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTGKFDMIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 +
Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLIGKAKYHG----Y 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D                 + L +  +  PLA  + +GD +
Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVDKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|229593270|ref|YP_002875389.1| putative ABC transporter substrate-binding protein [Pseudomonas
           fluorescens SBW25]
 gi|229365136|emb|CAY53374.1| putative ABC transport system, substrate-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 261

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 95/274 (34%), Gaps = 14/274 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +     A+ L DI  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            ISSV  L G +I V  G   ++ L         +     FE  
Sbjct: 116 KAYAPFYLAVFGPPDAAISSVDDLKGKTISVTRGAIEDIELTAVAPK---EATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + + +     
Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            V+    A      L    KN  Q  K+    D+
Sbjct: 231 KVNQILVAAKADGSLE---KNAMQWLKEPLPADL 261


>gi|269120726|ref|YP_003308903.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
 gi|268614604|gb|ACZ08972.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
          Length = 265

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 80/229 (34%), Gaps = 16/229 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++            G+  GFD+D  +A++  +  +   +Q+ P+N   + + L++
Sbjct: 37  KIIVGLDDTFAPMGFRDEKGELVGFDIDLAKAVAEKLGIE---VQFQPINWDSKEMELKN 93

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             I+++      T  R+    L F      + Q  ++ K   I +   L G  I  Q+ +
Sbjct: 94  GNINLIWNGLSITEERKK--QLLFSVPYLENSQIILVKKDSLIKTKEDLKGKIIGTQSKS 151

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           + E  +      ++       ++  ++      A R +A  GD      +K   ++    
Sbjct: 152 SGEDAVLAD-PVNSELKELRTYDTYDQAFLDLDAGRIEAIAGDEVLARFIKANKEKKEGK 210

Query: 215 VIL----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            +          K        + DT     ++ T       EEL     
Sbjct: 211 ELYTILEGSDFGKEEYGIGAKKEDTYLIEKINETI------EELKKDGT 253


>gi|308174188|ref|YP_003920893.1| high affinity arginine ABC transporter ATP-binding protein
           [Bacillus amyloliquefaciens DSM 7]
 gi|307607052|emb|CBI43423.1| high affinity arginine ABC transporter (ATP-binding protein)
           [Bacillus amyloliquefaciens DSM 7]
 gi|328554132|gb|AEB24624.1| high affinity arginine ABC transporter (ATP-binding protein)
           [Bacillus amyloliquefaciens TA208]
 gi|328912523|gb|AEB64119.1| high affinity arginine ABC transporter (ATP-binding protein)
           [Bacillus amyloliquefaciens LL3]
          Length = 255

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +   I    ++  +  S     K    L  G +     F     +    GFD
Sbjct: 1   MKKWLLVLVAACITFALSACGSGNSGSEGGKN--KLIMGTSADYKPFEYKDGD-QIVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL      D   ++   ++      AL+SKQ+D++      T  R+    + F  
Sbjct: 58  VDLAKALGKKTGYD---VEVQDMDFNSLITALKSKQVDMILSGMTPTPERKK--QVDFSG 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y      +  K   I S+  L G ++ VQ G+  E         +  +       R+ 
Sbjct: 113 IYYTANNMIVTKKGSSIKSLDDLKGKTVGVQLGSIQEEKGKKLASKYGFQLEDR--NRIS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++    ++ R DA   +         +N+             +S  A A  + D++    
Sbjct: 171 DLTEEIKSGRFDAAIIEDIVAQGYFSSNNDLQGFASADAKSDESGSAIAFRK-DSDLTAK 229

Query: 241 VSWTHYAMVTAEELG 255
            +     M    E+ 
Sbjct: 230 FNKALKEMEKNGEIE 244


>gi|28872357|ref|NP_794976.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213971836|ref|ZP_03399938.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301383373|ref|ZP_07231791.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302064066|ref|ZP_07255607.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302134966|ref|ZP_07260956.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28855612|gb|AAO58671.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213923382|gb|EEB56975.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|331017859|gb|EGH97915.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 261

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L+              FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E  +
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGLNKGQPELLS 230

Query: 240 IVSWTHYAM 248
            V+    A 
Sbjct: 231 KVNEILNAA 239


>gi|205372794|ref|ZP_03225604.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus
           coahuilensis m4-4]
          Length = 269

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 86/263 (32%), Gaps = 25/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----------TNAS-IL-GDIKKRGFLKCGINTGLVGF 47
           M K     +L L  +F  +             +NA   L  ++ + G L  G       F
Sbjct: 1   MKKWTLYLVLALTTIFIAACGTNETAEEETTGSNADMTLYDEVMENGELLIGTEGTYPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                +G+  GFDV+  + ++S +  +    +++       F  L S++ D+++      
Sbjct: 61  TFHDESGELTGFDVEIAKEVASRLGVEA---KFMETQWDAMFEGLNSERFDVIANQVGI- 116

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
              +      F           +  K+  I++  ++ G     Q+ T+    +A+ + A 
Sbjct: 117 -RDDRKETYDFSNPYIVSSAVLVTSKESDITTFEEIDGLKSA-QSLTSNYKDIAESYGA- 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 +  E + +        R D    D  A+      N+     +      +     
Sbjct: 174 ----EIVGVEGLAQAIQNLENGRVDVTVNDKIAILDYFKQNENAGVKIAATAEEASES-G 228

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               +G+ E    V+     M+ 
Sbjct: 229 FMFRKGNEELVEAVNKALEEMIE 251


>gi|77458291|ref|YP_347796.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas
           fluorescens Pf0-1]
 gi|77382294|gb|ABA73807.1| L-arginine-binding protein / L-ornithine-binding protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 259

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 88/265 (33%), Gaps = 22/265 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +L  T+ + +A           ++ GI  G   F+    +G   GFD
Sbjct: 1   MKKLVMFGALALSMLSLTAVAEDA---------KPIRIGIEAGYPPFSMKTPDGKLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     K  ++         AL+ K+ID +  +   T  R+    + F  
Sbjct: 52  VDIGDALCEQM---KVKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK--NVDFTI 106

Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+M    G+    ++L G  + V   +T +    +      +    + +   
Sbjct: 107 KYYHTPARFVMKAGSGVKDPLTELKGKKVGVLRASTHDRYATEVLVPAGI--ELVRYGSQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E +    + R DA   D   L    L  D       +      +         A+ +GD
Sbjct: 165 QEANLDMVSGRIDAMLADSVNLSDGFLKTDAGKGFEFVGPTYEDAKYFGGGAGIAVRKGD 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
           TE     +     +    +    Q 
Sbjct: 225 TELAEKFNTAINEIRANGKYKQVQD 249


>gi|332180727|gb|AEE16415.1| ABC-type transporter, periplasmic subunit family 3 [Treponema
           brennaborense DSM 12168]
          Length = 269

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 89/286 (31%), Gaps = 29/286 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K       C +I                 L ++K RG    G++           + D
Sbjct: 1   MKKMLAAVCACALIAGTVFAGGKKDSGVDNSLEELKTRGVFVLGLDDSFPPLGFRNESND 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D    +   +      ++  P++   +   L +  ID +      T  RE    
Sbjct: 61  IAGYDIDLAAEVCRRLG---VTLKCQPIDWAAKEQELNTGNIDCIWNGFTMTPERE--QA 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L+F      + Q  I+    GI +++ L+G SI +QAG++    +    +        + 
Sbjct: 116 LSFSKPYLDNAQVVIVRGNSGIKTLADLAGKSIGLQAGSSAADAVEAAPEFKKSVKEIVE 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+                    +  +             V+L + +S         + D 
Sbjct: 176 FKDNLTALMDLEIK--GVDGVVMDMVVGNYSIKTSGKNFVVLDEHLSSEKYGIGFRKRDV 233

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280
           +  + V                     Q++ D T   + Q++ G D
Sbjct: 234 KLRDEVQSVL----------------EQMAADGTVAAISQKWFGAD 263


>gi|163789715|ref|ZP_02184152.1| extracellular solute-binding protein, family 3 [Carnobacterium sp.
           AT7]
 gi|159874937|gb|EDP69004.1| extracellular solute-binding protein, family 3 [Carnobacterium sp.
           AT7]
          Length = 274

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 19/262 (7%)

Query: 2   YKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
            K + ++ + ++ LF ++             +  +L  ++  G LK G+      +  + 
Sbjct: 3   KKKWMLAGIAVVALFVSACGTSTKEDATSTADGDLLKSVQDAGVLKVGVMGTYQPYNFIN 62

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            + D  GFD D  + ++  +  D   I+++          LQ+ + D+++     T  R+
Sbjct: 63  EDKDMDGFDADIAKEIAKGLDVD---IEFVSQEFSGMIAGLQTGKFDMVASQMTITDDRK 119

Query: 112 ISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
             +   F      +  +  +      I+SV    G  I V  GT  E  L +       +
Sbjct: 120 KEM--LFSDPYITNQVKVIVKDDNTEITSVEDFVGKDIGVGLGTNDETYLRNELMPEVGE 177

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
           ++   ++ V        + R DA   ++ AL  +        +   + + I       A+
Sbjct: 178 FNIRTYDDVITSLKDLDSGRIDATINNMYALKPII--EANGLKIKAVGEPIKSDQAGIAV 235

Query: 231 IQGDTEWYNIVSWTHYAMVTAE 252
             G+  +   V+    A + A+
Sbjct: 236 QLGNEAFIEEVNTIL-ADIKAD 256


>gi|153869943|ref|ZP_01999447.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa
           sp. PS]
 gi|152073594|gb|EDN70556.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa
           sp. PS]
          Length = 224

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 5/204 (2%)

Query: 27  LGDIKKRGFLKCGINTGLVG----FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +  I+KR  L CG+ + + G    F  +   G   GFDVDFCRA+++AI ++P+ +  + 
Sbjct: 1   MDTIEKRTVLVCGVGSDVNGLKGGFTFINEKGQVAGFDVDFCRAVAAAILNNPNALSPVL 60

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +   +R   L    +D+L+  T WT  RE + G  F  IT++DGQGFI+ K   I+++ Q
Sbjct: 61  VRQSDRPGTLAPGNVDLLTATTTWTSTREANWG-NFTWITFYDGQGFIVKKDTSITTLEQ 119

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G +ICV  GTTT   L + F   ++ +  + F    E  AAY   +C AYT D S L 
Sbjct: 120 LEGKNICVVEGTTTLANLKEVFAQRSISFTLLTFPEATEEFAAYEQEQCTAYTSDRSTLA 179

Query: 203 ALKLTNDRPSEHVILPDIISKSPL 226
           +   +++ P  HV + + ISK+PL
Sbjct: 180 SWIFSSNTPDAHVFIDETISKNPL 203


>gi|242238356|ref|YP_002986537.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242130413|gb|ACS84715.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 254

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 89/237 (37%), Gaps = 10/237 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +    +L   + S  A  L DI++RG L+  +      F  V  +   +G+D+D  R L+
Sbjct: 1   MAGAALLIMQAGSAMADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDVARYLA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F         G
Sbjct: 61  GEM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSRAYAPFFLG 115

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
               K+  +SS   L G ++ V  G   ++ L D             +E      +AY +
Sbjct: 116 VFGPKEGDVSSPDALQGKTVGVTRGAVEDMVLTDIAPK---TADVKRYEDNNTTLSAYLS 172

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +          + A+      P++  +   ++  SP    + + +      V+   
Sbjct: 173 GQVQYIATGNLVVAAIA--EKNPTKAPVAKFMLKDSPCFIGLKKDEPALKAKVNALI 227


>gi|182435043|ref|YP_001822762.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326775559|ref|ZP_08234824.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
 gi|178463559|dbj|BAG18079.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326655892|gb|EGE40738.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 309

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 10/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +      KKRG+L  G         E    +G + GFD++  R +++++  +P  I++ 
Sbjct: 57  ESRTWTKAKKRGYLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 116

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQ+ QID          +R+  +G  F    Y  GQG ++      I   
Sbjct: 117 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDENDIHGP 174

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++C  AG+T    +A  +         + ++           ++ DA T D + 
Sbjct: 175 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 230

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L         P E  ++    S+ P    + + D    + ++    A 
Sbjct: 231 LLGFAAKA--PDEMKVVGKPFSQEPYGIGVPRDDNALRDALNDALEAN 276


>gi|260219978|emb|CBA27056.1| hypothetical protein Csp_A00370 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 282

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 84/243 (34%), Gaps = 6/243 (2%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--- 71
           +     +    +L  +   G L        + F+ V A+    G+ V+ C  L+ A+   
Sbjct: 1   MVGHGPAAATGVLERVSSGGKLVIAHRESSIPFSYVDADKKPVGYAVELCLKLADAVRKK 60

Query: 72  -FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 ++++L +    R   +   + D+   +T     R     +AF    +  G   +
Sbjct: 61  TGAKNMQVEFLQVTPANRIAMVAEGKADLECGSTTNNAER--RQKVAFTIPHFITGARML 118

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           +     I  +  L G  +    GTT         +   ++   +      +         
Sbjct: 119 VRADSKIERIEDLEGKKLVSTKGTTPLKAAEQANRERLLRITILEAPDHAKAVDMVEKSE 178

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            DA+  D   LY L     +P    ++   ++  PLA  + + D E+  ++      ++ 
Sbjct: 179 ADAFVMDDVLLYGLASNRPKPESLRVVGKFLTTEPLAIMLPKDDPEFKKLIDEEMRRLIV 238

Query: 251 AEE 253
           ++E
Sbjct: 239 SKE 241


>gi|154686659|ref|YP_001421820.1| YqiX [Bacillus amyloliquefaciens FZB42]
 gi|154352510|gb|ABS74589.1| YqiX [Bacillus amyloliquefaciens FZB42]
          Length = 255

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 85/255 (33%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V     I    ++  +  S     K    L  G +     F     +    GFD
Sbjct: 1   MKKWLLVLAAACITFALSACGSGNSGSEGGKN--KLIMGTSADYKPFEYKDGD-QITGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL      D   ++   ++      AL+SKQ+D++      T  R+    + F  
Sbjct: 58  VDLAKALGKKTGYD---VEVQDMDFNSLITALKSKQVDMILSGMTPTPERKK--QVDFSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y      +  K   + S++ L G ++ VQ G+  E         +  +       R+ 
Sbjct: 113 IYYTANNMIVTKKGSSMKSLNDLKGKTVGVQLGSIQEEKGKKLASKYGFQLEDR--NRIS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++    ++ R DA   +         +N              +S  A A  + D++    
Sbjct: 171 DLTEEIKSGRFDAAIIEDIVAQGYFSSNQDLQGFASADAKSDESGSAIAFRK-DSDLTAK 229

Query: 241 VSWTHYAMVTAEELG 255
            +     M    E+ 
Sbjct: 230 FNKALKEMEKNGEIE 244


>gi|227513106|ref|ZP_03943155.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus buchneri ATCC 11577]
 gi|227083681|gb|EEI18993.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus buchneri ATCC 11577]
          Length = 283

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 16/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
            K   V +  L+++  +           TN      + K+  +  G++   V       +
Sbjct: 6   KKCPLVIVTLLLMVVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDSFVPMGFETKS 65

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G+DVD  +A+         K+ + P++       L++  ID++         R   
Sbjct: 66  GKIVGYDVDLAKAVFKQYG---IKVDFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAK- 121

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH- 172
             + F      + Q  I  KK  I+S + +      VQAG+   + +    K    +   
Sbjct: 122 -KVTFSEPYLVNKQVLISKKKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180

Query: 173 --PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             PI+++   E      + R      D              + +  +P    K      +
Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQKDRATYQSVPSQFPKEYYGVGM 240

Query: 231 IQGDTEWYNIVSWTHY 246
            +GDT+    +     
Sbjct: 241 RKGDTKLKQKIDAGLN 256


>gi|15890315|ref|NP_355987.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158518|gb|AAK88772.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 268

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 81/238 (34%), Gaps = 17/238 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V+   L+   F+     A  L DI   G L+C +              +  GFD
Sbjct: 1   MKKSVIVA--GLLAATFSLTPAKADKLDDIISSGTLRCAVVLDFPPMGARDDANNPVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L+  +      ++       ER  AL S ++D+   +T  TL R  ++G+    
Sbjct: 59  VDYCNDLAKVLGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +        + K GI S   + G ++   AGT   + L    K   +      ++   
Sbjct: 114 PYFAFEMAVTANDKSGIKSFEDMKGKTVGATAGTFEAIALEKTVKEWGVG-EFRPYQTQA 172

Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229
           ++  A    + DA     +             + +    P +   +    ++      
Sbjct: 173 DVFLALSQGQIDATVSTSTVAQSTVKSGKFAGVSVVGKAPYDIDYVSLFTNRDEYGFI 230


>gi|227529073|ref|ZP_03959122.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
 gi|227351085|gb|EEJ41376.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
          Length = 289

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFAEVKA 52
            +      + + +L  +    +A              IKK G L  G++   V     + 
Sbjct: 7   IRALITLAIMIALLPISGCKKSANPNYRANHVDQWSRIKKSGQLNIGVDDSFVPMDFRQK 66

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG   G+DVD  RA+   +        +  ++   +   L++  ID++      T  R+ 
Sbjct: 67  NGKLVGYDVDLSRAVCKVLGLKA---NFQSIDWSMKETELKNGTIDVIWNGYTATPERQK 123

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMK 170
               AF  +    GQ  ++ K  GI+S   + G  + +Q G+T       Y +     + 
Sbjct: 124 --KEAFSRVYERSGQSLVVKKNSGINSFKDMQGKKLGLQEGSTAFTDFNKYPQLLKRYIS 181

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPA 229
             PI+++         +A R                   + +++ ++   +  +  +A  
Sbjct: 182 GSPIIYQDNNSAFMDLKAGRTQGVLAGTIYAGYYAKNLAKTNQYKLIGSNVFPQDRVAVG 241

Query: 230 IIQGDTEWYNIVSWTH 245
           + +GD      +++  
Sbjct: 242 MRKGDRTLVKKINYAL 257


>gi|238798559|ref|ZP_04642036.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC
           43969]
 gi|238717579|gb|EEQ09418.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC
           43969]
          Length = 272

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 82/248 (33%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +      A +L  +K+RG L  G+      F+    +G   GF
Sbjct: 13  RRRVVLGMVAVALATGLNVKSYAAADLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L+SK+ID+       +  R+      F 
Sbjct: 73  EVDFANALAEHMGIKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 127

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      S    L G  + V  G+  E  L +  K          ++
Sbjct: 128 TPYTVSGIQVLTKKGNEGNFSKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L         +     ++     A+ + + E 
Sbjct: 184 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNGTLAVAGPAFARQESGVALRKDNPEL 241

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 242 LAAINQAI 249


>gi|239813330|ref|YP_002942240.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239799907|gb|ACS16974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 301

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 4/231 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  I+  G    G+       A +  AN  + G+ V+ C  +   I    +K++Y+ + 
Sbjct: 31  TLDKIRSSGKAVLGVREASPPMAYMLGANEKYVGYHVELCERVLKDI-APQAKLEYMAVT 89

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A+     +Q+  +DI    T     R     +AF   TY            GISS+ QL+
Sbjct: 90  AQNTIPLVQNGTLDIGCGPTTNNTAR--QQQVAFALTTYVSEVRMATRVDSGISSLDQLA 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++    GTT    L    +A N     ++ +   E      + R DA+  D + L  +
Sbjct: 148 GRTVSASTGTTAVQLLRKRERAQNTTITTMLGKDHLESFLLMESGRADAFVLDDNLLAGI 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                 PS + I+ D +   P+A    + D  +   V      ++ + EL 
Sbjct: 208 IANAKNPSAYRIVGDALGSEPIALLFRKDDAIFKAAVDDALRRLMKSGELE 258


>gi|119963084|ref|YP_948498.1| glutamate-binding protein precursor [Arthrobacter aurescens TC1]
 gi|119949943|gb|ABM08854.1| Glutamate-binding protein precursor [Arthrobacter aurescens TC1]
          Length = 291

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 87/234 (37%), Gaps = 9/234 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             ++     + +  + K   +K G       F +   +G   GFDV+  +A+++ +    
Sbjct: 36  VASASFEAGTTMEKLNKAQTIKIGTKFDQPLFGQKGLDGKPVGFDVEMGKAIAAKLGIPA 95

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            KI+++   ++ R   ++  ++D++         R+    +AF    Y  GQ  +++K  
Sbjct: 96  DKIEWVETVSQNRESFIEQGRVDLVIATYTINDARKE--KVAFAGPYYEAGQALLVNKDD 153

Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+    +SG  +C   G+T   T+A+ + A       +            R  +  A 
Sbjct: 154 TSITKPEDVSGKKVCSVTGSTPAKTIAEKYGA-----EVVPAATYTACLEPLRNKQVVAV 208

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T D   L             +   +  +K P    + + DT + N ++      
Sbjct: 209 TTDNVILAGYVDKEPDA-FKLASDETFTKEPYGIGLKKDDTVFRNWINDQLEGF 261


>gi|330901940|gb|EGH33281.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 132

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 81/130 (62%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFI 130
           +TY+DG GF+
Sbjct: 123 VTYYDGIGFL 132


>gi|309805517|ref|ZP_07699562.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 09V1-c]
 gi|312871455|ref|ZP_07731549.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 3008A-a]
 gi|312874443|ref|ZP_07734473.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 2052A-d]
 gi|312874522|ref|ZP_07734547.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 2053A-b]
 gi|325911806|ref|ZP_08174210.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           UPII 143-D]
 gi|329920213|ref|ZP_08277025.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           SPIN 1401G]
 gi|308165168|gb|EFO67406.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 09V1-c]
 gi|311089913|gb|EFQ48332.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 2053A-b]
 gi|311090055|gb|EFQ48469.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 2052A-d]
 gi|311092975|gb|EFQ51325.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 3008A-a]
 gi|325476312|gb|EGC79474.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           UPII 143-D]
 gi|328936434|gb|EGG32880.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           SPIN 1401G]
          Length = 273

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
                +   ++   +K+   +  G       F  +   +    GF++D  +A++  +   
Sbjct: 21  GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +  +++    K R   L+++ I+ +      T  R+    + F       G   ++   
Sbjct: 81  DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I  V QL+   +    GTT    +             + ++   +  +A +A +  A 
Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T D   L  +    + P  H ++    +  P   A+ +G  E  + ++    A+
Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQDELRDHINKALLAL 245


>gi|312870437|ref|ZP_07730557.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus
           oris PB013-T2-3]
 gi|311093994|gb|EFQ52318.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus
           oris PB013-T2-3]
          Length = 282

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 79/234 (33%), Gaps = 9/234 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T+ +        I++R  +  G++   V     + NG   G+DVD  +A+        
Sbjct: 25  SVTTRANTQDTWSRIERRKKVVIGLDDSFVPMGFREKNGKLVGYDVDLAKAVFKQYG--- 81

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+ +  ++   +   L++  ID+L         RE    +AF      + Q  +  K  
Sbjct: 82  IKVDFQTIDWSMKETELKNGTIDLLWNGYSMNPSREK--KVAFSRPYLDNRQVLVTKKSS 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCD 192
            I  +S ++G S+ VQ G+T    L    K    K      ++++   +      A+R  
Sbjct: 140 HIDGLSGMAGKSLGVQNGSTGAAVLDAKPKLLKDKIKNKSAVLYDTFPDAFIDLNANRIQ 199

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTH 245
               D              + + +              + +GD      ++   
Sbjct: 200 GILMDQVYADYYVDHQKDKNAYQVYESKQLPAEYFGVGMRKGDKTLRKKINQGL 253


>gi|312863404|ref|ZP_07723642.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|311100940|gb|EFQ59145.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
          Length = 270

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 81/253 (32%), Gaps = 17/253 (6%)

Query: 1   MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   +    +  L    + S++   L  ++ +G L   +N     F          
Sbjct: 1   MKTWKKLLLGFAGIFALMTLAACSSSKDTLEKVQDKGTLTVALNPYFAPFEFKTIQDGKD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D++  +A+   +      +++  ++      ++QS + DI       T  R+   
Sbjct: 61  TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y      ++ K            +  S+ VQ G+  E       K++    +
Sbjct: 117 -FDFSDTYYESETVLVVKKDATGTYKQTGDFAKKSVAVQKGSIQESI----AKSNLSDAN 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +   +  E     ++ + +    + +        N+  +   I     SK   A A+ +
Sbjct: 172 VVSLAQPGEAINELKSGQVEGVVLEKAIAQGYIEQNNDLAVSDIALKSDSKDAYAVAMPK 231

Query: 233 GDTEWYNIVSWTH 245
           G  +    V+   
Sbjct: 232 GSDKLKAKVNKVI 244


>gi|254252492|ref|ZP_04945810.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124895101|gb|EAY68981.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 264

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       +L   ++  +  +  A    +L  +K+RG L+ G+      F      GD  
Sbjct: 1   MKFSLLKKLLVAGVIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +  +P    ++          LQ+ + D++      T  R+ +  L 
Sbjct: 61  GFDVDIAKAVAAKLGVNPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKET--LD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F P   +     I  K       S+  L G  + V  GT                     
Sbjct: 116 FSPAYTYSSAQLIQRKDDTREFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   L  L   +  P       ++ S +P      +G+ 
Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228

Query: 236 EWYNIVSWTHY 246
           ++   +     
Sbjct: 229 KFQKAIDDAMT 239


>gi|170699904|ref|ZP_02890933.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170135168|gb|EDT03467.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 257

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 90/252 (35%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +S   L +   T+ +         +    L    +        V   G   GFD
Sbjct: 1   MKLKTLLSAASLGMALLTAIAPGT---AFAQDSNVLNVATDATFPPMEFVD-KGQRTGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL+ A+     ++Q+  ++ K     L +++ D        T  R  +  + F  
Sbjct: 57  IDIMNALAKAMGK---QVQWTDIDFKGLIPGLVARRFDAAISGIYITPER--AQVVDFTQ 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   ++     I +++ L+G  + VQ GT +   L D    +  +   +  E+ +
Sbjct: 112 SYFAGGLSALVKADSPIKTLADLNGKKVSVQVGTKSVNFLRD----NYPQVQRVEVEKNQ 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+       R DA      A Y    T        +L   ++      A+ + +++  + 
Sbjct: 168 EMFDLVGIGRADAAVTGKPAAYQFVRTRPG---FRVLDKELTTEAYGIAVRKDESQLRDQ 224

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 225 MNAAL-AKIKAD 235


>gi|330446640|ref|ZP_08310292.1| lysine-arginine-ornithine-binding periplasmic family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490831|dbj|GAA04789.1| lysine-arginine-ornithine-binding periplasmic family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 258

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 87/254 (34%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K         +I    + +  A      K+   ++ GI      F+  + +G+ KGFD
Sbjct: 1   MKKWIL---AAALISAMGASAVQA------KEWKEVRFGIEGAYPPFSWTEPSGELKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     K + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCAQM---QVKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K   +    + L G  I VQ  TT +  L D F         + +   
Sbjct: 107 KYALIPNKFVAKKGTDLDFTKEGLKGVKIGVQRATTHDKYLTDNF---GDSVEIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           ++     +A R  +  GD SAL    L  D       +   ++           A+ + D
Sbjct: 164 DDAYLDLKAGRIVSVLGDASALEEGLLNKDGGDGFEFIGPSLTDPKWFGEGFGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAM 248
            +    +     A+
Sbjct: 224 KDLTKKLDEAILAL 237


>gi|229542367|ref|ZP_04431427.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
 gi|229326787|gb|EEN92462.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
          Length = 280

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 22/252 (8%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            IKK G +K  +   L  +  V  NG  +G+DV   + ++  +      ++++ +NA  R
Sbjct: 41  AIKKNGTIKIAVFGDLPPYGWVDKNGGRQGYDVALAKQVAKDLGVK---VKFVQVNANSR 97

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             AL+S ++D++  N   T  R+    + F         G +  KK  I++VSQL G S+
Sbjct: 98  VDALKSNKVDLVLANFTITPERK--QVVDFAKPYMKVSIGVVSPKKNPITNVSQLKGKSL 155

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            V  GTT E    +YF +         ++   E   A +  R  A   D S LYA     
Sbjct: 156 IVNKGTTAE----NYFTSKQKDVKLQKYDSKTEQFNALKNGRAVALADDNSYLYAW--VK 209

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           + P   V +  +     +APA+ +G+    N ++             IT+ N N   K+ 
Sbjct: 210 NHPDYTVGIKTLGPNQYIAPAVKKGNKSLLNWMNK-----------EITKLNNNGFFKND 258

Query: 269 TNPDVQRFLGID 280
            N ++  + G D
Sbjct: 259 YNNNLAPYFGSD 270


>gi|331007421|ref|ZP_08330602.1| putative binding protein component of ABC transporter [gamma
           proteobacterium IMCC1989]
 gi|330418771|gb|EGG93256.1| putative binding protein component of ABC transporter [gamma
           proteobacterium IMCC1989]
          Length = 274

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 8/249 (3%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  +FF  ++L        S +  A  L D+  +G ++CG+           +N +  G 
Sbjct: 1   MKSNFFKKALLAASFGLLASGNVAADKLDDVLSKGKVRCGVVLDFPPMGFRDSNNNPVGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C  L+ A+  +   +    L   ER  +L S ++D+   ++  TL R  ++G  F 
Sbjct: 61  DVDMCADLAKAMNIEYEIVG---LTWAERIPSLISGKVDVAIASSSDTLERAQTVG--FT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKYHPIVFE 177
                     ++  K   +S   L   ++    GTT E     Y K +    K     F+
Sbjct: 116 IPYMVFQFQALLSDKSEAASWEDLKDLNVGSAVGTTYESEFLKYKKENWEGAKGKYSSFQ 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   A    + +A     +A   +  +       +          +    ++ +  W
Sbjct: 176 SENESFLAVSQGQVNAVIVTDTAAANVISSGKFKGVKLGPVAPFGADIVGMMTLRKEFGW 235

Query: 238 YNIVSWTHY 246
            N ++    
Sbjct: 236 INYLNLYIN 244


>gi|320159830|ref|YP_004173054.1| amino acid ABC transporter substrate binding protein precursor
           [Anaerolinea thermophila UNI-1]
 gi|319993683|dbj|BAJ62454.1| amino acid ABC transporter substrate binding protein precursor
           [Anaerolinea thermophila UNI-1]
          Length = 251

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 22/254 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WK 57
           M +      ++L + ++F        S      ++  ++   +     F  V  N     
Sbjct: 1   MKRFSVILWAMLIMALVFSACTPAQPS------EKTKVRVATDATFPPFEMVDENTKQLT 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   A++     +   ++++ +        +   Q D+       T  R+    + 
Sbjct: 55  GFDVELMNAIAQKAGFE---VEWINVGFDPMLAGIAECQYDMAIAAITITEERKA--SMD 109

Query: 118 FRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F       GQ   + K+   IS  + L G  I  Q GTT  +       A         +
Sbjct: 110 FSDPYINAGQIVTVRKETTDISGKNDLKGKKIGAQLGTTGAIEAEKIEGA-----EVKTY 164

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  ++        + DA   D     A   T   P +   + ++ +      A  +   +
Sbjct: 165 DSYDQAFLDLANGQIDAVIADYPTTLAFLAT--NPDKLKTVGEVFTDENYGVAFCKKKAD 222

Query: 237 WYNIVSWTHYAMVT 250
               V+    A+  
Sbjct: 223 LIPQVNAAIKALKE 236


>gi|300693657|ref|YP_003749630.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299075694|emb|CBJ34991.1| putative amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 280

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 93/249 (37%), Gaps = 13/249 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67
           +  L  L   S    A    +I+K   L+CG    +  FA       +  GFDVD C+AL
Sbjct: 10  LTVLACLCAASLPALADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCQAL 69

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +       +  PL+ + R   ++  ++D+   N  +TL R   +   F    Y   +
Sbjct: 70  AKRLG---VAAKITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              +      +S +   G  +    G+T+EL++            P+ F+       A +
Sbjct: 125 MLAVKASDPGTSKADYKGKRLAAAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178

Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +      +   +  L   +     E  ++ + +   P+   + +G+ +    V+    
Sbjct: 179 QGKALGIVSNTMTITKLVNQSKSGGIELKMIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238

Query: 247 AMVTAEELG 255
           AM  A E+ 
Sbjct: 239 AMDKAGEIN 247


>gi|255030491|ref|ZP_05302442.1| hypothetical protein LmonL_17866 [Listeria monocytogenes LO28]
          Length = 278

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFSNGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269


>gi|194468314|ref|ZP_03074300.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
 gi|194453167|gb|EDX42065.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
          Length = 283

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +        I++R  +  G++   V     + NG   G+DVD  RA+         K+ +
Sbjct: 30  ADTQDTWNRIERRKRVIVGLDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P++   +   L++  ID+L         R     +AF      + Q  +  KK  I ++
Sbjct: 87  QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197
           + ++G ++ VQ G+T    L +  K    K     P++++          A+R      D
Sbjct: 145 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKNHTPVLYDTFPNAFIDLNANRIQGILMD 204

Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                         + +   +   +     A  + +GD      ++     +    EL 
Sbjct: 205 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 263


>gi|16804289|ref|NP_465774.1| hypothetical protein lmo2250 [Listeria monocytogenes EGD-e]
 gi|224500950|ref|ZP_03669257.1| hypothetical protein LmonFR_00275 [Listeria monocytogenes FSL
           R2-561]
 gi|16411720|emb|CAD00328.1| arpJ [Listeria monocytogenes EGD-e]
          Length = 486

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFSNGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269


>gi|239817984|ref|YP_002946894.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239804561|gb|ACS21628.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 303

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 96/235 (40%), Gaps = 6/235 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS----AIFDDPSKI 78
               L  I++ G +  G+       +     G + GF V+ C  + +    A+  +   +
Sbjct: 25  QTDTLKKIRESGAITMGVRDASGAMSFTLGPGSYTGFHVEVCERVVADIGRALQIEKIHV 84

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y  +  + R   +Q+  +DI    T     R+  +   F P  Y +G    +    GI 
Sbjct: 85  KYQLVTPQNRIALVQNGTVDIECGTTTNNAARQKDVA--FAPTLYVEGVRIAVKAASGIV 142

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S +QLSG ++    GTT+   L    +    +   ++ +   E      + R D +  D 
Sbjct: 143 SPAQLSGKAVAATTGTTSVQLLRKLKREGAGEIAEVLAKDNSEGFLLLESGRVDGFAADG 202

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
             L  L   +  P+++ +L  ++S  P+A  + +GD  +  +V  +  ++  + E
Sbjct: 203 QILATLISKSREPAQYKLLDQVLSVEPIAIMLAKGDPAFKKLVDQSVVSLARSGE 257


>gi|78061686|ref|YP_371594.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77969571|gb|ABB10950.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 266

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 16/250 (6%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M      F   I   ++   T+ S  A +L  +K+ G LK  +      F    A+G  +
Sbjct: 1   MKHFTPTFKQGIAAALLCIATATSHAADLLDTVKQSGVLKIALEGTYPPFDYRNADGQLE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +   P   Q++          LQ+ + D++      T  R     L 
Sbjct: 61  GFDVDVAKAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F     +     +  +       S+ +L G  I V  G+     +              V
Sbjct: 116 FSTPYVYSSAQLLQRQNDARAFKSLDELKGKKIGVTMGSNYVDLVKTVPA-----IDLQV 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R DA   D   + +  + N R            +  +     +G+ 
Sbjct: 171 YPGTPENLRDLAAGRIDAAVNDR-LMLSYLIKNSRLPLRPGSVLAGGEDRMGIPFRKGNP 229

Query: 236 EWYNIVSWTH 245
           ++   +    
Sbjct: 230 KFAKAIDDAV 239


>gi|15675229|ref|NP_269403.1| putative amino acid ABC transporter periplasmic amino acid-binding
           protein [Streptococcus pyogenes M1 GAS]
 gi|71910795|ref|YP_282345.1| histidine-binding protein [Streptococcus pyogenes MGAS5005]
 gi|13622398|gb|AAK34124.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus pyogenes M1 GAS]
 gi|71853577|gb|AAZ51600.1| histidine-binding protein [Streptococcus pyogenes MGAS5005]
          Length = 278

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K     +      F  +        +    G  +K+  +  G +   V       +G  
Sbjct: 4   KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGRC 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  + +         K+ +  +N   +   L + +ID++      T  R     +
Sbjct: 64  KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QDKV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174
           AF      + Q  ++ K+  I ++S +    +  Q+ ++   +L    K           
Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D            +   + ++P        +  + + 
Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 239 DKTLQAKINRA 249


>gi|283455710|ref|YP_003360274.1| glutamate-binding protein gluB [Bifidobacterium dentium Bd1]
 gi|283102344|gb|ADB09450.1| Glutamate-binding protein GluB [Bifidobacterium dentium Bd1]
          Length = 256

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 88/238 (36%), Gaps = 16/238 (6%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
           +   ++   +          G ++ GI     G      NG + GFDVD  + ++  +  
Sbjct: 1   MFAVSACGADD-------ADGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGY 52

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +I +    +K+R   LQ+  +D +      T  R+    ++F    +  GQ  ++ K
Sbjct: 53  SEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAGPYFVAGQDLLVRK 110

Query: 134 K-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I     L+G  +C   G+T+ +T+ + F +   +   +      E   A  +   D
Sbjct: 111 DETSIKGPEDLNGKRLCSVTGSTSAVTVKEKFAS---EVQLMEQPGYAECATALFSGIVD 167

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A T D   L  L           ++    ++      I +GDT+    ++     M+ 
Sbjct: 168 AVTTDDIILAGLASAAR--GRLRVVGKPFTQEYYGVGIKKGDTQLATKINNAIADMIQ 223


>gi|318605287|emb|CBY26785.1| cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 253

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +  + L             +L  +K+RG L  G+      F+    +G   GF+VDF  A
Sbjct: 1   MMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANA 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +       +  P        +L+SK+ID+       +  R+      F       G
Sbjct: 61  LAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFSTPYTVSG 115

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              +  K      S    L G  + V  G+  E  L +  K          ++       
Sbjct: 116 IQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKYQ 171

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +     ++     A+ + + E    ++  
Sbjct: 172 DLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPELLAAINQA 229

Query: 245 H 245
            
Sbjct: 230 I 230


>gi|327394609|dbj|BAK12031.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           ArgT [Pantoea ananatis AJ13355]
          Length = 260

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    S                ++ G +     F    A G   GFD
Sbjct: 1   MKKRVLALSLMLGLSSAASVFAAVPT--------SIRVGTDPTYPPFESKNAQGQLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I    +K  Y+  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLANEICKRI---QTKCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSD 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   I  +   L G +I V  GTT E    +Y++   +   P  +   
Sbjct: 108 KLYAANARLVAPKGSKIEPTPEALKGKNIGVLQGTTQETYANEYWRPKGVTVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D        L       +      +    +        + + D
Sbjct: 166 DLVYQDLTAGRIDAAFQDEVQAAEGFLKQPVGKSYAFAGPAVKDDKIFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A+  A E        ++++K   N +V
Sbjct: 226 TELKA-------AIDKAFESMRKDGTYDKIAKKYFNFNV 257


>gi|313680186|ref|YP_004057925.1| amino acid ABC transporter substrate-binding protein, paat family
           [Oceanithermus profundus DSM 14977]
 gi|313152901|gb|ADR36752.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 254

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 15/235 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  +++ L L+ L     +       +IK+ G +  G       F       + KGFD
Sbjct: 1   MKRILWLASLVLV-LGSLGMAQKFRTFPEIKQSGKILIGTEGAFPPFNFFDDQNNLKGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +   P    +         +AL   + D +  +   T  R     + F  
Sbjct: 60  IDIGNAIAGQLGLGPE---WKAHAWDTMLIALNQGRFDFVIASHTITEERAK--AVDFTK 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G   +  K  G  +  +L G  I  Q GTT E      F           ++   
Sbjct: 115 PYYCTGNVIVS-KPGGPQTPEELKGKVIGAQLGTTFEE-----FAKQFGPKQLKTYQTNP 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +        R DA+  D         + D    ++ +  ++++  +  A+ +G++
Sbjct: 169 DAVQDLMLGRIDAWITDQFTAIEAIQSRD---LNLQISGLLNREEIGMAVAKGNS 220


>gi|291618215|ref|YP_003520957.1| ArgT [Pantoea ananatis LMG 20103]
 gi|291153245|gb|ADD77829.1| ArgT [Pantoea ananatis LMG 20103]
          Length = 260

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    S                ++ G +     F    A G   GFD
Sbjct: 1   MKKRVLALSLMLGLSSAASVFAAVPT--------SIRVGTDPTYPPFESKNAQGQLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I    +K  Y+  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLANEICKRI---QTKCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSD 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   I  +   L G +I V  GTT E    +Y++   +   P  +   
Sbjct: 108 KLYAANARLVAPKGSKIEPTPKALKGKNIGVLQGTTQETYANEYWRPKGVTVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D        L       +      +    +        + + D
Sbjct: 166 DLVYQDLTAGRIDAAFQDEVQAAEGFLKQPVGKSYAFAGPAVKDDKIFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A+  A E        ++++K   N +V
Sbjct: 226 TELKA-------AIDKAFESMRKDGTYDKIAKKYFNFNV 257


>gi|126649374|ref|ZP_01721615.1| amino acid ABC transporter (substrate-binding protein) [Bacillus
           sp. B14905]
 gi|126593699|gb|EAZ87622.1| amino acid ABC transporter (substrate-binding protein) [Bacillus
           sp. B14905]
          Length = 264

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 82/254 (32%), Gaps = 15/254 (5%)

Query: 1   MYK--DFFVSILCLIILFFTSF-----STNASIL-GDIKKRGFLKCGINTGLVGFAEVKA 52
           M K     + ++  + L          +++ S    D   +   K G       F  V  
Sbjct: 1   MKKTAWMLLMMIAALTLALAGCGTKDNASSGSTPSEDADGKKVYKVGTEATFAPFESVDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G   G DVD  +A++  +     ++++  +  +  F  +++ +  I +     T  R+ 
Sbjct: 61  KGKIVGIDVDILKAIADEM---NFEVEWNNIGWEPVFQTIKNGETHIGASGITITDERKE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F    Y      ++ +   I S+ +L    + VQ   T  +             +
Sbjct: 118 --SFDFTEPYYESQLLIVVKEDSKIKSLDELKDKKVSVQINATGHMAAKKLQGEA--STN 173

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + FE              DA  GD + +Y     +      VI  D   K      + +
Sbjct: 174 IMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQKIKVIQDDAFEKEYYGFMVQK 233

Query: 233 GDTEWYNIVSWTHY 246
           G+ E  + ++    
Sbjct: 234 GNKELLDKLNEGLK 247


>gi|153213074|ref|ZP_01948612.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
 gi|124116121|gb|EAY34941.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
          Length = 260

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 3   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +  +    + +P +      +L +++ D +      T  R+    + F  
Sbjct: 54  VDMANALCDEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K      +   L G  I VQ  TT +  + D +         + +   
Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225

Query: 235 TEWYNIVSWTHYAM 248
            E    +     A+
Sbjct: 226 KELTEKLDAAITAL 239


>gi|167033607|ref|YP_001668838.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166860095|gb|ABY98502.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 262

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 92/280 (32%), Gaps = 28/280 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    S    +I  F+     A  L  +++   L+  ++     F+      +  GFD  
Sbjct: 7   RMLLASSAVAVIALFSQGVAQADDLQAVQESKILRVAMSGQYAPFSFANEKNEIVGFDAS 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              AL+  +      I+ +          L +K+ D +  +   T  R     + F    
Sbjct: 67  IGEALAQRLGVK---IKIITTPFDGIIAGLLAKKYDAVIASMTITPER--LKAVDFVGPY 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y  G+   + +   I  +  L   ++ V  G +      D +           ++ + E+
Sbjct: 122 YHAGRTIGVKEGSPIKGLDDLKDVTVGVTLGDSH-----DKWARARGNLKVRTYKGLPEM 176

Query: 183 DAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                A R DA   D    + A+K T  +     +  +   +  L  AI + + E    +
Sbjct: 177 LVDLDAGRIDAVVMDSIPVMVAVKETGQKVRIINLPDEQGGREGLGIAIRRNNPELKAQL 236

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280
                               +++  D T  ++  R++G D
Sbjct: 237 QKAL----------------DEILADGTYKEISMRWVGSD 260


>gi|19746199|ref|NP_607335.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus pyogenes MGAS8232]
 gi|19748381|gb|AAL97834.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus pyogenes MGAS8232]
          Length = 278

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K     +      F  +        +    G  +K+  +  G +   V       +G  
Sbjct: 4   KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  + +         K+ +  +N   +   L + +ID++      T  R     +
Sbjct: 64  KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QNKV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174
           AF      + Q  ++ K+  I ++S +    +  Q+ ++   +L    K           
Sbjct: 119 AFTDSYMRNEQIIVVTKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +E   +     ++ R D    D            +   + ++P        +  + + 
Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 239 DKTLQAKINRA 249


>gi|258647025|ref|ZP_05734494.1| amino acid ABC transporter, amino acid-binding protein [Dialister
           invisus DSM 15470]
 gi|260404466|gb|EEW98013.1| amino acid ABC transporter, amino acid-binding protein [Dialister
           invisus DSM 15470]
          Length = 269

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 13/264 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56
            K   +  L        +                     +  G++            G+ 
Sbjct: 4   KKMIVIGALACGAAGLVAGCGGEKKAAAPAADKSAKPTKIVAGMDDTFAPMGFRDDKGEI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +A+S  I      I++ P++   +   L+S +ID +      T  R+    L
Sbjct: 64  VGFDIDMAKAVSKEIG---IPIEFKPIDWASKETELESGRIDCIWNGFTMTPERQK--AL 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF      + Q +++     +    +L G  + +Q  +T +  L               +
Sbjct: 119 AFTKPYMDNVQVYVVLADSAVQKAEELKGKKLSIQESSTAQTLLDRDENLKKSFGEIKAY 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             +        + R DA   D   +        +P++   LP  +SK   +  I + +  
Sbjct: 179 PDLTACFMDLESGRADAVLADTCLI--EYYMTKKPNKFRELPGEVSKDTFSIGIKKDNKV 236

Query: 237 WYNIVSWTHYAMV-TAEELGITQK 259
             +I++     ++   E   I+QK
Sbjct: 237 LVDILNDGIDKVIKNGEASKISQK 260


>gi|325062212|gb|ADY65902.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 268

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 86/246 (34%), Gaps = 8/246 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V+   L+   F      A  L DI   G L+C +              +  GFD
Sbjct: 1   MKKSVIVA--GLLAATFAITPAKADKLDDIISSGTLRCAVVLDFPPMGARDDANNPIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L+ A+      ++       ER  AL S ++D+   +T  TL R  ++G+    
Sbjct: 59  VDYCNDLAKALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +        + K G+ S   + G ++   AGT   + L    K   +      ++   
Sbjct: 114 PYFAFEMAVTANDKSGVKSFEDMKGKTVGATAGTFEAIALEKTVKEWGVG-EFRPYQTQA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + DA     +   A   T       V+         +A    + +  + N 
Sbjct: 173 DVFLALSQGQIDATVSTSTVAQANVKTGKFAGISVVGKAPYDIDYVALFTNRDEYGFINY 232

Query: 241 VSWTHY 246
           ++    
Sbjct: 233 LNLFIN 238


>gi|217963588|ref|YP_002349266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes HCC23]
 gi|217332858|gb|ACK38652.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes HCC23]
 gi|307571836|emb|CAR85015.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Listeria monocytogenes L99]
          Length = 486

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 106/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV   + ++  +     K++   +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAKKIAKNL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269


>gi|256830362|ref|YP_003159090.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
 gi|256579538|gb|ACU90674.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
          Length = 270

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 18/272 (6%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           MY+   + I+CL +        S +   S+L  + +RG L+ G +T  V +A    NGD+
Sbjct: 1   MYRITAILIVCLSLSAGFMPRESSAAEKSVLDQVMERGVLRVGFDT-FVPWAMKDKNGDY 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  R +++ +  +   I+ +P        AL + + DI+         R  +L +
Sbjct: 60  IGFEIDVARKVAADMGVE---IELVPTKWSGIIPALLTGKFDIIIGGMGIQPSR--NLKV 114

Query: 117 AFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F     F G   +  +     +SS+   +   I + A T      A   K H  K    
Sbjct: 115 NFSSPYEFSGMSLVASIAAAPNLSSLDDFNKPEIILSAKTGASSVAA--AKKHIPKATVR 172

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +F+   +        R  A            + N       +  +  ++ P+  A+ +GD
Sbjct: 173 MFDDEAQALQEVLNGRAHAMVASAPFPEQQAIRNKDTLYLPLQGETFAQEPIGFAVRKGD 232

Query: 235 TEWYNIV-SWTHYAMVT---AEELGITQKNIN 262
            ++ N + +W   A      AE      K ++
Sbjct: 233 HDFLNFLNNWVLVAGTEGWLAERYAYWFKTMD 264


>gi|148543752|ref|YP_001271122.1| extracellular solute-binding protein [Lactobacillus reuteri DSM
           20016]
 gi|184153158|ref|YP_001841499.1| glutamine ABC transporter substrate binding component
           [Lactobacillus reuteri JCM 1112]
 gi|227363268|ref|ZP_03847400.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM2-3]
 gi|325682124|ref|ZP_08161642.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM4-1A]
 gi|148530786|gb|ABQ82785.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183224502|dbj|BAG25019.1| glutamine ABC transporter substrate binding component
           [Lactobacillus reuteri JCM 1112]
 gi|227071724|gb|EEI10015.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM2-3]
 gi|324978768|gb|EGC15717.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM4-1A]
          Length = 283

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +        I++R  +  G++   V     + NG   G+DVD  RA+         K+ +
Sbjct: 30  ADTQDTWNRIERRKRVIVGLDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P++   +   L++  ID+L         R     +AF      + Q  +  KK  I ++
Sbjct: 87  QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197
           + ++G ++ VQ G+T    L +  K    K     P++++          A+R      D
Sbjct: 145 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKNHTPVLYDTFPNAFIDLNANRIQGILMD 204

Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                         + +   +   +     A  + +GD      ++     +    EL 
Sbjct: 205 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 263


>gi|312862723|ref|ZP_07722963.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|311101583|gb|EFQ59786.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
          Length = 277

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 25/259 (9%)

Query: 2   YKDFF----VSILCLIILFFTSF--STNASI--------LGDIKKRGFLKCGINTGLVGF 47
           +K F     V+ L ++ +F  S   +             +  I KRG L  G+   +  F
Sbjct: 3   FKKFLRYLTVACLAIVTIFLISSYKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNF 62

Query: 48  AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
               A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L      
Sbjct: 63  GYYSAKTNSYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R+ S  +      Y D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  A
Sbjct: 120 NDERKASYAI--SDPYYHDQIGFLVLKNSGINKISDLNGKTIGVSQGASTKAALQEYASA 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           HN+K++ +      E+  +  AHR +A++ D S L   +    +      L +       
Sbjct: 178 HNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTK-----TLKEGFKTQEY 232

Query: 227 APAIIQGDTEWYNIVSWTH 245
             A  + + E  +  +   
Sbjct: 233 GIASSKSNQELIDYTNDLI 251


>gi|167036063|ref|YP_001671294.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166862551|gb|ABZ00959.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 266

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +       +  A  + D  KRG L+ G++   + F      G+  GF+
Sbjct: 1   MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      +            AL + + D++      T  R  +L L F  
Sbjct: 61  VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 +
Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLIGKAKYHG----Y 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D                 + L +  +  PLA  + +GD +
Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVEKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|299541710|ref|ZP_07052040.1| amino-acid ABC transporter extracellular-binding protein yqiX
           precursor [Lysinibacillus fusiformis ZC1]
 gi|298725805|gb|EFI66439.1| amino-acid ABC transporter extracellular-binding protein yqiX
           precursor [Lysinibacillus fusiformis ZC1]
          Length = 264

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 92/266 (34%), Gaps = 22/266 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEVKA- 52
           M    F+ +L L+I    +  T         S     + +  LK G +     F  V A 
Sbjct: 1   MKNKLFIMMLVLVIGVLAACGTKDNNASDTGSTTDT-EGKQVLKVGTSADYAPFEYVDAA 59

Query: 53  NGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            G+   GFD+D  + +   I  D   +Q   ++      ALQ+ +ID++         RE
Sbjct: 60  KGEEIIGFDIDLIKLVGEKIGVD---MQVQDMDFNSLVPALQAGKIDVVISGMTPNPERE 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               + F        Q  ++ K  GI   + L+G  I VQ  +  E    +   A  +  
Sbjct: 117 KV--VDFSDKYNETEQVILVKKDSGIKKEADLAGKKIGVQTASIQENLGNEI--AKKVDV 172

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                 R+ EI     + R DA   +         TND+     +         +A    
Sbjct: 173 TVEGRTRIPEIVQDMMSKRLDAGILEGGVAKGYLKTNDQLEAFPVEEQPEDFKAIAV--- 229

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGIT 257
              ++  + ++     +  AEE  I 
Sbjct: 230 PKGSDLKDKINKALKEL--AEEGKIK 253


>gi|183396654|dbj|BAG28253.1| periplasmic amino acid-binding protein of amino acid ABC
           transporter [Desulfotignum balticum]
          Length = 262

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 82/249 (32%), Gaps = 10/249 (4%)

Query: 1   MYKDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F S    L +I + +T  +   S    I++ G +  G       F+    +G  +
Sbjct: 1   MKKKLFASFILALAVIAVTWTCAAAGDSRWSKIEQSGSITVGNCPEYPPFSFRNTSGLVE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD DF RAL +A+  D   +       +     ++    DI+          + S  + 
Sbjct: 61  GFDSDFARALGNALGVD---VVIKDTAWEGLVAGMKKGDHDIIISCMSPEEATQASDSVN 117

Query: 118 FRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                Y   +  +       I++   L+G  + VQA +T+E+                 +
Sbjct: 118 MSNPYYQLSEIIVTRSDVTDITTKEDLAGRIVGVQANSTSEVAGDSLADMDIKVKDLRRY 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            R  E     +  R DA                   +  I+ D +    +   +  G+ E
Sbjct: 178 NRNSEALIDLKNKRVDAVVVG---FAYAATKIKDSPDLKIINDPVRSVDIVVVLDHGEDE 234

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 235 LTEKINQAI 243


>gi|154508366|ref|ZP_02044008.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC
           17982]
 gi|293193556|ref|ZP_06609826.1| CjaA protein [Actinomyces odontolyticus F0309]
 gi|153798000|gb|EDN80420.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC
           17982]
 gi|292819912|gb|EFF78914.1| CjaA protein [Actinomyces odontolyticus F0309]
          Length = 300

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 11/218 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             IK+ G +  GI +    F  + A+G   G+DV +   +++ +       +Y+P++A  
Sbjct: 52  EQIKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA---KYVPVDAAA 108

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R   L S ++DI   N   T  R     + F    +    G +      I+ VSQL+G +
Sbjct: 109 RTEVLASNKVDITLANFTVTPERAE--KVDFANPYFKVSLGVVSPTSAEITDVSQLAGKT 166

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  GTT E      F+A++ +     +++  +   A    R DA++ D + + A  + 
Sbjct: 167 LIVTKGTTAEAY----FEANHPEVKLQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWAIQ 222

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P   V +  +   S +A A+ +G+T   + ++   
Sbjct: 223 --HPGFSVGIKSLGETSYIAAAVKKGNTALLDWLNNQL 258


>gi|258611906|ref|ZP_05711707.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|258607027|gb|EEW19635.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
          Length = 211

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 11/216 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174
           F      + Q  +  K   I+  S +   ++  Q G ++   +A   +          P 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +++  +         R D    D            +
Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKTKK 211


>gi|313895101|ref|ZP_07828658.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975996|gb|EFR41454.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 257

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 80/257 (31%), Gaps = 13/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M       I    +L         S     ++   L+ G       F        +++GF
Sbjct: 1   MKLKKLAMIFTGALLSLAVVGCGGSGDQAKQEAKTLRVGATIDFAPFEFQDEGQKEYQGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  RA++  +  +        +       ALQ+K ID++         R+    + F 
Sbjct: 61  DMDLIRAIAKEMGREAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--KVNFS 115

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++   +  I S + L G  +  Q GTT+   L +           +    
Sbjct: 116 APYYQSGLTMVVRSDEEAIKSFNDLKGHKVAAQIGTTSANMLKE-----QEGITVLELNT 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +A   DA   D        +   +      L D++S      AI + +TE  
Sbjct: 171 PADCFMELKARGVDAVVNDRPVN-DYYINQTQAVGVKSLSDMLSAEEYGIAISKDNTELQ 229

Query: 239 NIVSWTHYAMVTAEELG 255
             +      +    E  
Sbjct: 230 KEIDAALKKLHDNGEYD 246


>gi|323498511|ref|ZP_08103504.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326]
 gi|323316400|gb|EGA69418.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326]
          Length = 262

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 84/231 (36%), Gaps = 15/231 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +    IL DIK  G LK   ++G + F     NG + GFD+D  + ++ AI      +
Sbjct: 16  TPALADPILDDIKSSGELKVCFDSGYMPFEMTAKNGQYIGFDIDLGKQMARAIGVKYVPV 75

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKG 136
                        L + +  ++      T  R  ++ + F       GQ  +     +  
Sbjct: 76  N---TAWDGIIPTLLTGKCHMIMGGMTITPKR--NIQVNFADPYVVIGQSILLDPKHEGK 130

Query: 137 ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           I+    L+ A   V     TT E  +  Y     +     ++E   E        + DA+
Sbjct: 131 ITDYRDLNSAEFVVATKLGTTGEQAIKRYLPKAKVN----LYETQSEAVLEVANGKVDAF 186

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D+        + +   + V L +  +  PL  A+ QG+ +  N ++   
Sbjct: 187 IYDLPFNA--IYSAENKGQLVHLAEPFTYEPLGWAVPQGNPDTINFLNGYL 235


>gi|50123405|ref|YP_052572.1| putative extracellular solute-binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613931|emb|CAG77384.1| putative extracellular solute-binding protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 279

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 89/250 (35%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M   +    +  + L        A +L DI  RG L+C + + +  F+          G 
Sbjct: 1   MTLKYSACSVLALPLVLVFSPAKADLLSDITARGDLQCAVYSDVPPFSSPDPKTRQLAGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C AL+  +      +  +P + + R   + + + D+L  N  +T  R     + F 
Sbjct: 61  DVDLCHALAKEMGVK---VTLVPTSVEARIAVIATGRADVLIANLAYTKTR--GNQIQFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  ++ K     ++    G  I    GTT+E ++      H      + F+  
Sbjct: 116 DPYYVAKEMLLVKKANADKAIEDFKGQRISATKGTTSEQSI------HLKGGKAVTFQDS 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A + ++   +  +      +         E  ++ + ++  P+   + + +    
Sbjct: 170 ASAFLALQQNKAVGFVTNTMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALL 229

Query: 239 NIVSWTHYAM 248
             V+ +   M
Sbjct: 230 AKVNSSLKTM 239


>gi|323142138|ref|ZP_08076983.1| glutamine ABC transporter periplasmic protein
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413398|gb|EFY04272.1| glutamine ABC transporter periplasmic protein
           [Phascolarctobacterium sp. YIT 12067]
          Length = 255

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 77/256 (30%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M K     ++ ++                      L+ G       F   K       GF
Sbjct: 1   MKKVLVFLMMAIMACSMLLTGCGGEEKKAADSAKVLRVGTEPVFAPFEFPKEGSKDLTGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++   AL   +      ++ + +       AL S  ID+       T  R+    + F 
Sbjct: 61  DIELIEALGKKMGYK---VEMVSMGFDALIPALNSNNIDVAIAGMTITDERKKV--VDFT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G   ++ K   + S+  L G +I  Q GTT E        A         F   
Sbjct: 116 ESYYTSGLMIMVRKDSNVKSIDDLKGKTIACQIGTTGENKSRTVEGAK-----VKAFNTQ 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E     +    DA  GD   +        +      + + +   P   A+ +G ++   
Sbjct: 171 DEASLELKNGGADAVIGDAPVIEYYMTKAGK-DFAKTVGERMEAEPYGIAVKKG-SKLAG 228

Query: 240 IVSWTHYAMVTAEELG 255
            ++     +  + E  
Sbjct: 229 DLNKALAELKKSGEYD 244


>gi|312278808|gb|ADQ63465.1| Polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus ND03]
          Length = 276

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 1   MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   + +  +  L    + S++ + L  +K +G L   +N     F          
Sbjct: 1   MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKNKGTLTIALNPHFAPFEFKTIQDGKD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D++  +A+   +      +++  ++      ++QS + DI       T  R+   
Sbjct: 61  TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116

Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              F    Y      ++ K    K    +S  S  SI VQ G+  E       KA+ +  
Sbjct: 117 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLLDA 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +   +  E     ++ + +    + +        N   +   I     S    A A+ 
Sbjct: 172 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 231

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 232 KGSDDLKAKVNKII 245


>gi|288905588|ref|YP_003430810.1| amino acid transporter, amino acid-binding protein [Streptococcus
           gallolyticus UCN34]
 gi|288732314|emb|CBI13884.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus gallolyticus UCN34]
          Length = 273

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 93/281 (33%), Gaps = 18/281 (6%)

Query: 1   MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           M  K  F+ +L L   + L     S+N ++   I K+G L   ++     F     V   
Sbjct: 1   MKIKKIFLGVLALISVLTLAACGSSSNENLQEKIVKKGKLVVAVSPDYAPFEFKALVDGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G DV+  +A++  +  +   ++   ++      +LQ+ + D+      +T  R   
Sbjct: 61  DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      ++        +SV  LSG  + VQ GT  E    D         
Sbjct: 118 --YDFSDAYYETENAILVKASDVDTYTSVDSLSGLKVAVQKGTIEENLAKDQL----SDS 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +    + E     ++ +  A   +          N   +      +       A A+ 
Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           +   E    V+     +   ++      +  Q++ D  + D
Sbjct: 232 KDSGELVKTVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272


>gi|229104759|ref|ZP_04235420.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-28]
 gi|228678632|gb|EEL32848.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-28]
          Length = 259

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 93/254 (36%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N  +  + + +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGDVKEEKRNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDIDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++ K  + K      +R
Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEFKKQVDFKAEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAILEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|114565876|ref|YP_753030.1| extracellular solute-binding protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114336811|gb|ABI67659.1| extracellular solute-binding protein, family 3 [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 255

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 8/232 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
              +++      IK +G+   G++             +  GFDVD  + ++  +  +   
Sbjct: 10  APETSSDESWTKIKDKGYFVMGLDDAFPPMGFRDEANEIVGFDVDLAKEVAQRLGVE--- 66

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +Q+  +    +   L S  ID++      T  R+      F      D Q  ++     I
Sbjct: 67  VQFQSIVWDTKKEELNSGNIDVIWNGFTITEERK--QDFLFSKPYISDRQIIVVRADSDI 124

Query: 138 SSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +S + L+G  I +QA ++    + AD      +K + + FE  +      +    +    
Sbjct: 125 ASKADLAGKKIGIQAASSANEAVEADKETFEVIKDNLLQFESNDLALRDLKGGGVE--AV 182

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +  +      +  P ++ +L D              D  ++  V      M
Sbjct: 183 VVDEVVGRYYLSKHPGDYKVLKDNFDLEDFGVGFRLDDKAFHAEVEKALDEM 234


>gi|302387425|ref|YP_003823247.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
 gi|302198053|gb|ADL05624.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
          Length = 257

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 86/261 (32%), Gaps = 20/261 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K+       + +  F +    +            +  G L    N     +     N 
Sbjct: 1   MKKNVIAIAGVICMAAFLTACAGSGTKTETTAADQKEAAGKLVMVTNAEFPPYEYHD-NN 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D D  +A++  +  +   ++   +       A+QS + D  +        R+   
Sbjct: 60  QIVGIDADIAKAIADKMGVE---LEIQDMAFDSLIPAVQSGKADFAAAGMTVNEDRKK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F        Q  I+ +   I +   L+G  I VQ GTT ++   D   A        
Sbjct: 115 NVDFTDTYAEAAQVIIVKEGSQIKTPDDLAGKKIGVQTGTTGDIYADDIENA-----DIQ 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F +  E   A    + DA   D       K+     +  VIL +  ++   A A+ + +
Sbjct: 170 RFNKGMEAVMALSQDKIDAVIIDR---EPAKVFVKENAGLVILDEAFTEEEYAIAVKKDN 226

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E  + ++     +  + EL 
Sbjct: 227 KELLDKMNGAIKELKESGELK 247


>gi|116671348|ref|YP_832281.1| extracellular solute-binding protein [Arthrobacter sp. FB24]
 gi|116611457|gb|ABK04181.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 294

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 81/225 (36%), Gaps = 9/225 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S +  + K G +K G       F +V  +G   GFDV+  + +++ +     KI++ 
Sbjct: 45  AAGSTMEKLSKAGSIKIGTKFDQPLFGQVGLDGKPIGFDVEMGKLIAAKLGIPADKIEWS 104

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140
              +  R   ++  ++D++         R     ++F    Y  GQ  +++K    I   
Sbjct: 105 ETVSANREPFIEQGKVDLVIATYTINDKR--KQVVSFAGPYYEAGQALMVNKDNDTIKKP 162

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  +C   G+T   T+ + + A       +            R  + +A T D   
Sbjct: 163 EDVKGKKVCSVTGSTPAATIVEKYGA-----ELVPAATYSACLEPLRNKQVEAITTDNVI 217

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L             +   +  +K P    + + DT + N ++   
Sbjct: 218 LAGFVDKEPEA-FKLASDETFTKEPYGIGLKKDDTVFRNWINDQL 261


>gi|300763939|ref|ZP_07073935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria
           monocytogenes FSL N1-017]
 gi|300515280|gb|EFK42331.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria
           monocytogenes FSL N1-017]
          Length = 486

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 24/279 (8%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     I  ++++F           +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K++   +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNVSIKDIQDTGLLKKYQKEANKLM 269


>gi|302541695|ref|ZP_07294037.1| putative glutamate periplasmic binding protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302459313|gb|EFL22406.1| putative glutamate periplasmic binding protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 305

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 94/283 (33%), Gaps = 40/283 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------------------------ILGDIKKRG 34
           M +   V +  L+    +      S                               K+ G
Sbjct: 7   MRRTLTVILALLLAFTGSGCGKEGSPPAKGPAPEELPRYRVATDFRLPSSPTWRKAKRLG 66

Query: 35  FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           +L  G+        E     G + GFD++  + +S+++   P  I++  + +  R  ALQ
Sbjct: 67  YLTVGVKEDQPYLGEKDPATGRYSGFDIEIAKMMSASLGFPPRTIRFRSIASANRETALQ 126

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQA 152
           + QID          LR+  +G  F    Y  GQ  ++      I   + L+G ++C  A
Sbjct: 127 NGQIDYYVGTYTINPLRKRLVG--FAGPYYMAGQSLLVRTDTDDIHGPADLAGKTVCSAA 184

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T    +   +       H + ++          +++ DA T D   L         P 
Sbjct: 185 GSTPLQRIQHDYPKA----HAVAYDNYSVCVDNLLSYQVDAVTTDNVILLGYAAKA--PE 238

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           E  ++    SK P    + + D        +     + A E  
Sbjct: 239 ELKLVGKPFSKEPYGIGVPKRDNAL----RFALDDAIEAHERN 277


>gi|261381399|ref|ZP_05985972.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria subflava NJ9703]
 gi|284795613|gb|EFC50960.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria subflava NJ9703]
          Length = 267

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 88/257 (34%), Gaps = 12/257 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++ C  +        + +           + G N     F  + + G  +GFD
Sbjct: 3   MKKWLATALACSALALTACGGQSNN--ASAPADKVYRVGSNAEFAPFESLDSAGKVEGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++ A      K+++     +  F +L +  +DI+      T   +    + F  
Sbjct: 61  VDLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLFSD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  ++ K K +SS   L     + V  G T + +++      N       FE V
Sbjct: 116 PYFEITQVVLVPKGKKVSSSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFESV 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             I         D+   D + +      N  +  + + LPD  +      A  +GD    
Sbjct: 174 PLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEATI 232

Query: 239 NIVSWTHYAMVTAEELG 255
            +++     +  + E  
Sbjct: 233 KMLNDALKKVRESGEYD 249


>gi|150376017|ref|YP_001312613.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150030564|gb|ABR62680.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 268

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 82/238 (34%), Gaps = 17/238 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M          L+     +   +A  L DI   G L+C +            N +  GFD
Sbjct: 1   MKTSIL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L+ A+      ++       ER  AL S ++D+   +T  TL R  ++G+    
Sbjct: 59  VDYCNDLAKALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +        ++K GI S   + G  +   AGT   + L +  KA         ++   
Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172

Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229
           ++  A    + DA     +             + + +  P +   +    ++      
Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFI 230


>gi|238927935|ref|ZP_04659695.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Selenomonas flueggei ATCC 43531]
 gi|238884268|gb|EEQ47906.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Selenomonas flueggei ATCC 43531]
          Length = 268

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 3   KDFFVSILCLI----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           K        L     IL     +  A    +  + G +  G++           N +  G
Sbjct: 4   KTVLTGAAVLACSAAILTGCGSTEKAPSTDNAAEMGKIIVGLDDNFPPMGFKDENNEIVG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  +  +  +  +   +++  ++   +   L+S ++ +L    D T  R+    + F
Sbjct: 64  FDVDLAKEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQVLWNGLDITEKRKE--NMLF 118

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 + Q   + K    ++    L+G ++  Q+  T E  +               + 
Sbjct: 119 SNPYMDNHQIIFVKKGNTAVTDEKSLAGKTVGTQSAGTAEEYMDASDFYKKEVKEVKKYP 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTE 236
                       R DA  GD   +      +  P     L  ++   S    A  + +T+
Sbjct: 179 DYVAAFMDLENGRLDAVIGDE--IVGRYYMSKHPDTLDALDVVVGPVSEFGIAFAKDNTK 236

Query: 237 WYNIVSWTHYAM 248
             + V      M
Sbjct: 237 LRDEVQKVLDEM 248


>gi|170691224|ref|ZP_02882389.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170143429|gb|EDT11592.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 251

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M     +S+ C    +     S + +A           L    +           NG   
Sbjct: 1   MKLQRLLSLACVTFAVTFGGFSGAASAQTPE------VLNVATDATFPPMEYT-ENGART 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL+  +     ++Q+  ++ K     L + + D        T  R     + 
Sbjct: 54  GFDVDLMNALAKVMGK---RVQWTDIDFKGLIPGLIAHRFDAAISGIYITDERAKV--ID 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G   ++     I +V+ L+G  + VQ GT +   L D F   N     +  E
Sbjct: 109 FTDSYYAGGLAVLVKSDSPIKTVTDLNGKKVSVQVGTKSVNFLRDNFPQINR----VEVE 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           + +E+       R DA         A        +   +L   ++      A+ + + + 
Sbjct: 165 KNQEMFDLVGIGRADAAVTGKP---AAYQVAKTRTGFRVLDKTLTTEAYGIAVRKDEPQL 221

Query: 238 YNIVSWTHYAMVTAE 252
               +    A + A+
Sbjct: 222 KAAFNTAL-ARIKAD 235


>gi|148550100|ref|YP_001270202.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148514158|gb|ABQ81018.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 266

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +       +  A  + D  KRG L+ G++   + F      G+  GF+
Sbjct: 1   MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      +            AL + + D++      T  R  +L L F  
Sbjct: 61  VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 +
Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHG----Y 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D                 + L +  +  PLA  + +GD +
Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVEKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|154487060|ref|ZP_02028467.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis
           L2-32]
 gi|154084923|gb|EDN83968.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis
           L2-32]
          Length = 280

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 9/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G ++ GI     G      NG + GFDVD  + ++  +     +I +    +K+R   
Sbjct: 35  ETGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAM 93

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+  +D +  +   T  R+    + F    +  GQ  ++ K +  I     L+G  +C 
Sbjct: 94  LQNGDVDYIVASYSITDERKKV--VDFAGPYFVAGQDLLVRKDETGIDGPKDLNGKRLCS 151

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             GTT+ + + + F     +   +    + E   A  +   DA T D   L  L   +  
Sbjct: 152 MTGTTSAVNVKEKFAK---QTQLMEQPGMAECATALLSGIVDAATTDDIILAGLASASR- 207

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                ++    ++      + +G+TE  N ++     M+ 
Sbjct: 208 -GRLRVVGKPFTQEYYGIGVKKGNTELKNKINNAITDMIQ 246


>gi|225076270|ref|ZP_03719469.1| hypothetical protein NEIFLAOT_01310 [Neisseria flavescens
           NRL30031/H210]
 gi|224952394|gb|EEG33603.1| hypothetical protein NEIFLAOT_01310 [Neisseria flavescens
           NRL30031/H210]
          Length = 267

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 90/259 (34%), Gaps = 16/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    ++ C  +          NAS   D       + G N     F  + + G  +G
Sbjct: 3   MKKWLATALACSALALTACGGQSNNASTPAD----KVYRVGSNAEFAPFESLDSAGKVEG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD   A++ A      K+++     +  F +L +  +DI+      T   +    + F
Sbjct: 59  FDVDLMDAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +   Q  ++ K K ++S   L     + V  G T + +++      N       FE
Sbjct: 114 SDPYFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFE 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTE 236
            V  I         D+   D + +      N  +  + + LPD  +      A  +GD  
Sbjct: 172 SVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEA 230

Query: 237 WYNIVSWTHYAMVTAEELG 255
              +++     +  + E  
Sbjct: 231 TIKMLNDALKKVRESGEYD 249


>gi|46908483|ref|YP_014872.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes str. 4b F2365]
 gi|226224858|ref|YP_002758965.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes Clip81459]
 gi|254825186|ref|ZP_05230187.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J1-194]
 gi|254931637|ref|ZP_05264996.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes HPB2262]
 gi|254992059|ref|ZP_05274249.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J2-064]
 gi|255519729|ref|ZP_05386966.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J1-175]
 gi|46881754|gb|AAT05049.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes serotype 4b str. F2365]
 gi|225877320|emb|CAS06034.1| Putative amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293583191|gb|EFF95223.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes HPB2262]
 gi|293594430|gb|EFG02191.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J1-194]
 gi|328465831|gb|EGF37019.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 1816]
 gi|328472142|gb|EGF43017.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 220]
          Length = 486

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 24/279 (8%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     I  ++++F           +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K++   +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269


>gi|66043568|ref|YP_233409.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254275|gb|AAY35371.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 261

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L++             FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     +   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPAMKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAM 248
            V+    A 
Sbjct: 231 KVNEILNAA 239


>gi|328956821|ref|YP_004374207.1| putative ABC transporter [Carnobacterium sp. 17-4]
 gi|328673145|gb|AEB29191.1| putative ABC transporter [Carnobacterium sp. 17-4]
          Length = 274

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 92/255 (36%), Gaps = 18/255 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTN----------ASILGDIKKRGFLKCGINTGLVGFAEVK 51
            K + ++ +  + LF ++  T+            +L  ++  G LK G+      +  + 
Sbjct: 3   KKKWMLAGIAAVALFVSACGTSTKEDATSTEGGDLLQSVQDAGVLKVGVMGTYQPYNFIN 62

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            + D  GFD D  + ++  +  D   I+++          LQ+ + D+++     T  R+
Sbjct: 63  EDKDMDGFDADIAKEIAKGLDVD---IEFVSQEFSGMIAGLQTGKFDMVASQMTITDDRK 119

Query: 112 ISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
             +   F      +  +  +      I+SV    G  I V  GT  E  L +       +
Sbjct: 120 KEM--LFSDPYITNQVKVIVKDDNTEITSVEDFVGKDIGVGLGTNDETYLRNELMPEVGE 177

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
           ++   ++ V        + R DA   ++ AL  +        +   + + I       A+
Sbjct: 178 FNIRTYDDVITSLKDLDSGRIDATINNMYALKPII--EANGLKIKAVGEPIKSDQAGIAV 235

Query: 231 IQGDTEWYNIVSWTH 245
             G+  +   V+   
Sbjct: 236 QLGNEAFIEEVNTIL 250


>gi|255026707|ref|ZP_05298693.1| hypothetical protein LmonocytFSL_10867 [Listeria monocytogenes FSL
           J2-003]
          Length = 486

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269


>gi|294102238|ref|YP_003554096.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
 gi|293617218|gb|ADE57372.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
          Length = 258

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 96/259 (37%), Gaps = 16/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + IL +I+    +  + A+    +  R  ++ G       F       +  G+D
Sbjct: 1   MLKTSKIFILSVIMSLIVAAPSLAA--KSVMDRTVIRVGTEATYPPFEYRSEKNEIVGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL + +  D   ++ + ++      AL + +ID+++     T  R     + F  
Sbjct: 59  IDVVKALGAHLGKD---VELVDMSFDGLIPALLTGKIDMIAAGMTNTEERRK--KVDFSD 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y     F+       IS +  L+     VQ GT  ++ + +      +      F++ 
Sbjct: 114 VYYEIENAFVTKSDDESISKIEDLADKVATVQIGTAQDIFITNT----KLPKEIKRFQKN 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPAIIQGDT 235
           ++        R D    +++   A    ND     + +            +A AI +GDT
Sbjct: 170 DDALREVLLGRSDFCVVNLTVANAYLRNNDAFGSTLKIAFRNFIHKQGEGIALAIPKGDT 229

Query: 236 EWYNIVSWTHYAMVTAEEL 254
            +   ++     M  + EL
Sbjct: 230 TFQEALNKVLDEMKKSGEL 248


>gi|94309635|ref|YP_582845.1| extracellular solute-binding protein [Cupriavidus metallidurans
           CH34]
 gi|93353487|gb|ABF07576.1| putative amino-acid-binding periplasmic abc transporter protein
           [Cupriavidus metallidurans CH34]
          Length = 282

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 11/223 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             + DIK +G L CG+      F+ V     +  G+DVD C A++ ++   P       +
Sbjct: 31  DQIADIKAKGQLVCGVLGTDEPFSFVDPATREIVGYDVDMCNAVAKSLGVKP---VLKQI 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +   R   LQ   +D+L+ +      RE    + F   T+  GQ  ++ K+ GI+++ QL
Sbjct: 88  SVAARLPELQQGHVDLLAASLTHNKERES--QIDFSLSTFITGQKAMVRKESGITTLGQL 145

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  I    G+T E  +A   K        + F+   +   A    +  AY  D ++L +
Sbjct: 146 DGKKILTVKGSTMESNIAAKIK----NATVVSFDNSPQALLALEQGKGVAYVNDETSLVS 201

Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +       ++ ++P  +S   LA  I +G+T + N V+   
Sbjct: 202 NLVKLGPAAKDYTLVPQYLSSEHLALGIRKGETGFRNQVNQVL 244


>gi|330955266|gb|EGH55526.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7]
          Length = 281

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 86/257 (33%), Gaps = 20/257 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  +G   GF+
Sbjct: 7   RRTFLFSAMGLMLNAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +   +  I + + L+G  + + + ++ E  L         +  P+      
Sbjct: 124 TVSGIQALVLKTNEDKIKTATDLTGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 183

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 184 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPNS 240

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 241 VAIEKDDPEWDAKVRQV 257


>gi|265984043|ref|ZP_06096778.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|264662635|gb|EEZ32896.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
          Length = 265

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    + +  + +   S +     + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MKRIAMATSVAALAITVGSMAAG---VANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 58  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 112

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G    K   I   +   L+G +I VQ  TT     A+Y +          +  
Sbjct: 113 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234
            EE        R DA   D   L     + D     +I           P    AI +G 
Sbjct: 169 AEEYRLDLANGRLDAVNDDSVTLVEWLKSPDGACCKMIGTFPPVTEIHGPGAGIAIKKGR 228

Query: 235 TEWYNIVSWTHYAM 248
            E     +    A+
Sbjct: 229 PELVAKFNAAIKAI 242


>gi|315605387|ref|ZP_07880430.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312956|gb|EFU61030.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 299

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 14/251 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             TS          IK+ G +  GI +    F  + A+G   G+DV +   +++ +    
Sbjct: 38  SATSAQVGDRSPEQIKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              +Y+P++A  R   L S ++DI   N   T  R     + F    +    G +     
Sbjct: 98  ---KYVPVDAAARTEVLASNKVDITLANFTVTPERAE--KVDFANPYFKVSLGVVSPSSA 152

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ V QL+G ++ V  GTT E      F+A++ +     +++  +   A    R DA++
Sbjct: 153 EITDVGQLAGKTLIVTKGTTAEAY----FEANHPEVKLQKYDQYSDAYQALEDGRGDAFS 208

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D + + A  +    P   V +  +   S +A A+ +G+    + ++     +    E  
Sbjct: 209 TDNTEVIAWAIA--HPGFSVGIKSLGETSYIAAAVKKGNAPLLDWLNNQLTEL---GEEN 263

Query: 256 ITQKNINQVSK 266
              K+  Q   
Sbjct: 264 FFHKDYEQTLA 274


>gi|291295430|ref|YP_003506828.1| extracellular solute-binding protein family 3 [Meiothermus ruber
           DSM 1279]
 gi|290470389|gb|ADD27808.1| extracellular solute-binding protein family 3 [Meiothermus ruber
           DSM 1279]
          Length = 247

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 84/265 (31%), Gaps = 22/265 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +  L+ L   S +   S L +++  G L  G +     F  +  N    GFD
Sbjct: 1   MRKGIVVMV--LVGLLGVSGALAQSCLANVRANG-LTVGTSPDYPPFESLDKNNKIIGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    + + +      + ++  +      AL +K+ID+++     T  R+    + F  
Sbjct: 58  VDLLNLIGAELGVK---VNFIGQSFDGLIPALLTKKIDLIAAGLTITEERKK--SVDFTR 112

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K+   IS +  L+G  + VQ G+  E   +    A         +   
Sbjct: 113 PYISGPNVIITRKETTGISKLEDLAGKKVAVQIGSAQEKIASGVKGA-----EVKSYNLY 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A    + DA         A             L  + +      A+ +  ++   
Sbjct: 168 TDAALAVNTRQADALIVHRFVGRAFLKQYPDLKIVAELNQVDT----GLALRKECSDL-- 221

Query: 240 IVSWTHYAMVTAEELGITQKNINQV 264
                  A +   E       +   
Sbjct: 222 --RRAIDAAIEKLEKNGKMDELAAK 244


>gi|167815972|ref|ZP_02447652.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 91]
          Length = 264

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 19/252 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K   V+ L +   F  + +  A +L ++K+RG L+ G+      F      G+ 
Sbjct: 1   MKIASLKKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L
Sbjct: 60  VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDPRK--QTL 114

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F P   F     I  K       S+  L G  + V  GT                    
Sbjct: 115 DFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E      A R DA   D   L  L      P       ++ S +P      +G+
Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGN 227

Query: 235 TEWYNIVSWTHY 246
            ++   ++    
Sbjct: 228 PKFAKAIADAMT 239


>gi|322516340|ref|ZP_08069266.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter substrate binding protein [Streptococcus
           vestibularis ATCC 49124]
 gi|322125178|gb|EFX96567.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter substrate binding protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 290

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 81/253 (32%), Gaps = 17/253 (6%)

Query: 1   MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   +    +  L    + S++   L  ++ +G L   +N     F          
Sbjct: 21  MKTWKKLLLGFAGIFALTTLAACSSSKDTLEKVQDKGTLTVALNPHFAPFEFKIIQDGKD 80

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D++  +A+   +      +++  ++      ++QS + DI       T  R+   
Sbjct: 81  TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 136

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y      ++ K            +  S+ VQ G+  E       K++    +
Sbjct: 137 -FDFSDTYYESETVLVVKKDATGTYKQTGDFAKKSVSVQKGSIQESI----AKSNLSDAN 191

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +   +  E     ++ + +    + +        N+  +   I     SK   A A+ +
Sbjct: 192 VVSLAQPGEAINELKSGQVEGVVLEKAIAQGYIEQNNDLAVSDIALKSDSKDAYAVAMPK 251

Query: 233 GDTEWYNIVSWTH 245
           G  +    V+   
Sbjct: 252 GSDKLKAKVNKVI 264


>gi|260566496|ref|ZP_05836966.1| extracellular solute-binding protein family 3 [Brucella suis bv. 4
           str. 40]
 gi|261752264|ref|ZP_05995973.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261754923|ref|ZP_05998632.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|260156014|gb|EEW91094.1| extracellular solute-binding protein family 3 [Brucella suis bv. 4
           str. 40]
 gi|261742017|gb|EEY29943.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261744676|gb|EEY32602.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
          Length = 265

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    + +  + +   S +     + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MKRIAMATSVAALAITVGSMAAG---VANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 58  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 112

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G    K   I   +   L+G +I VQ  TT     A+Y +          +  
Sbjct: 113 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234
            EE        R DA   D   L     + D     ++           P    AI +G 
Sbjct: 169 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 228

Query: 235 TEWYNIVSWTHYAM 248
            E     +    A+
Sbjct: 229 PELVAKFNAAIKAI 242


>gi|307319173|ref|ZP_07598603.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306895280|gb|EFN26036.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
          Length = 266

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 81/244 (33%), Gaps = 12/244 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +   +S+LC   L     S   A  +  IK  G +K G+      F  + AN    G+D 
Sbjct: 5   RRMAISVLCAAALVAGLVSPVAAQTVEVIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDA 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  +  +   +  +P+    R   LQS Q+D+L  +   T  R     + F   
Sbjct: 65  DVAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAK--NVDFSQP 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G        ++    L+G +I V   +T +  +           +   F+    
Sbjct: 120 YAGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTAVTKIAPQ---DANIQRFDDDAS 176

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  + + +           ++          +    +S+     A+ +G  E    V
Sbjct: 177 AVQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKL---QLSQQVQGIAVRKGSNEMLKFV 233

Query: 242 SWTH 245
           +   
Sbjct: 234 NGFL 237


>gi|238064114|ref|ZP_04608823.1| glutamate binding protein [Micromonospora sp. ATCC 39149]
 gi|237885925|gb|EEP74753.1| glutamate binding protein [Micromonospora sp. ATCC 39149]
          Length = 281

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 86/253 (33%), Gaps = 12/253 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M      +++    L     S     +   ++    +   +  G+       +    +G 
Sbjct: 1   MRVTRAAAVVVFATLSLIPGSCGRGDSGPDVIEKAAETKTITIGVIPNQPNLSLK-TDGT 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFDV+  + ++  +  DP+ IQ+      +R   ++   +D++         R+  + 
Sbjct: 60  YVGFDVEIGKIVAKGLGVDPANIQWKDTTVPDRERVIKDGTVDLVVATYTINDARKKEIR 119

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y  GQ  ++     I     L G  +C  AG+T     A   ++   K     
Sbjct: 120 --FAGPYYVAGQDLLVKANSTIKGPEDLEGKVVCSSAGSTP----AKRIRSQYPKTRLQQ 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++         +   DA T D   L    +  +   +  ++ +  S+ P    + + D 
Sbjct: 174 YDQESRCLPDLESGAIDAVTTDNVVLLGYSMRPENAGKFKLVGNTFSEEPYGIGMKKRDR 233

Query: 236 EWYNIVSWTHYAM 248
                ++    A 
Sbjct: 234 ASCEKINEILQAA 246


>gi|254391810|ref|ZP_05007005.1| glutamate binding periplasmic protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294815492|ref|ZP_06774135.1| glutamate binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|326443843|ref|ZP_08218577.1| glutamate binding periplasmic protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|197705492|gb|EDY51304.1| glutamate binding periplasmic protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294328091|gb|EFG09734.1| glutamate binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 276

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 80/249 (32%), Gaps = 14/249 (5%)

Query: 1   MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M        +     + L  T+    A           +  GI     G       G++ 
Sbjct: 4   MKLRKASLAIATGLALSLTLTACGGGAGSDDS-----KIVIGIKFDQPGIGLKTPEGNFT 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD    ++  +  +   I++    + +R   +++  +  ++ +      R+    + 
Sbjct: 59  GLDVDVATYVAKELGYEAKDIEWKQAPSADRETLIRNGDVKFVAASYTINDKRKA--EVD 116

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    +   Q  ++      I+ V  L+   +C   G+T+   + D             +
Sbjct: 117 FAGPYFLAHQDLLVRADDNSITKVEDLNKKKLCSVRGSTSAQNVKD---KRVPGADLQQY 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E          DA T D + L       +   +  +L   +S+ P    + +GD E
Sbjct: 174 GGYSECLTGLENKAVDALTTDDAILAGYASQKEHQGKFKLLGLKLSEEPYGIGLKKGDKE 233

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 234 LRDKINKAL 242


>gi|254899048|ref|ZP_05258972.1| hypothetical protein LmonJ_04529 [Listeria monocytogenes J0161]
 gi|254912811|ref|ZP_05262823.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937138|ref|ZP_05268835.1| arpJ [Listeria monocytogenes F6900]
 gi|284802697|ref|YP_003414562.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578]
 gi|284995839|ref|YP_003417607.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923]
 gi|258609741|gb|EEW22349.1| arpJ [Listeria monocytogenes F6900]
 gi|284058259|gb|ADB69200.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578]
 gi|284061306|gb|ADB72245.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923]
 gi|293590807|gb|EFF99141.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 486

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269


>gi|294102162|ref|YP_003554020.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
 gi|293617142|gb|ADE57296.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
          Length = 256

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 87/247 (35%), Gaps = 14/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   ++L         +    + ++  +  G +     F      G   GFD
Sbjct: 1   MKKSVVLVMFFALLLGVVGGPAFGAG--SVMEKDTVIIGTSGSYPPFEFHDKTGALVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +        ++ +       +L + +ID+++     T  R  S  +AF  
Sbjct: 59  IDLANEVVARLGKKAE---WVDMAFDGVIPSLLTGKIDMIAACLSITEER--SKKVAFST 113

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+++K    ++++  L G ++ VQ GTT ++ +++             F ++
Sbjct: 114 PYMVSLSAFVLNKDSGEMATLEDLKGKTVAVQLGTTQDVYISEV-----EGVTVKQFPKL 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +        R DA   D +       + + +          +  +  A A+ Q D  + 
Sbjct: 169 NDAVREVTLKRADASLMDETVAETYINSEEFKGQLKKSFTVELKGAKQALAVSQNDPAFL 228

Query: 239 NIVSWTH 245
             V+   
Sbjct: 229 EAVNKIV 235


>gi|254826861|ref|ZP_05231548.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL N3-165]
 gi|258599240|gb|EEW12565.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL N3-165]
          Length = 486

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269


>gi|320529942|ref|ZP_08031019.1| putative glutamine ABC transporter periplasmic protein [Selenomonas
           artemidis F0399]
 gi|320137960|gb|EFW29865.1| putative glutamine ABC transporter periplasmic protein [Selenomonas
           artemidis F0399]
          Length = 258

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 80/258 (31%), Gaps = 14/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK-RGFLKCGINTGLVGFAEVKA-NGDWKG 58
           M       I    +L         S     K+    L+ G       F        +++G
Sbjct: 1   MKLKKLAMIFTGTLLSLAMVGCGGSSGDQAKQEAKVLRVGATIDFAPFEFQDEGQKEYQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  RA++  +  +        +       ALQ+K ID++         R+    + F
Sbjct: 61  FDMDLIRAIAKEMGREAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--KVNF 115

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   ++   +  I S + L G  +  Q GTT+   L +           +   
Sbjct: 116 SAPYYQSGLTMVVRSDEEAIKSFNDLKGHKVAAQIGTTSANMLKE-----QEGITVLELN 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +     +A   DA   D        +   +      L D++S      AI + +TE 
Sbjct: 171 TPADCFMELKARGVDAVVNDRPVN-DYYINQTQAVGVKSLSDMLSAEEYGIAISKDNTEL 229

Query: 238 YNIVSWTHYAMVTAEELG 255
              +      +    E  
Sbjct: 230 QKEIDAALKKLHDNGEYD 247


>gi|270263422|ref|ZP_06191691.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13]
 gi|270042306|gb|EFA15401.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13]
          Length = 263

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K   V+ L  ++L   + S  A  L +I++RG L+  +      F  V  +   +G+D+
Sbjct: 3   FKKIGVATLGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE ++   F   
Sbjct: 63  DMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKTIA--FSRA 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K+  +   +QL G ++ V  G   ++ L+D             +E    
Sbjct: 118 YAPFFLGVFGPKEAVLGDAAQLDGKTVGVTRGAVEDMVLSDTAPK---GAQIKRYEDNNT 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + +          L    +    P++  +   ++  SP    +  G+      V
Sbjct: 175 TLSAYLSGQVQYIATGN--LVVSAIARQNPTKAPVAKFMLKDSPCFVGLRLGEPALKAKV 232

Query: 242 SWTH 245
               
Sbjct: 233 DELI 236


>gi|221069888|ref|ZP_03545993.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|220714911|gb|EED70279.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
          Length = 320

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 97/277 (35%), Gaps = 26/277 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----------------------SILGDIKKRGFLKC 38
           M K    + L   ++   S                             L   +  G +  
Sbjct: 1   MGKSLKWAGLAAALVCAGSAMAAGKTEAASSTIGANIDTAVELSASPTLQRWQAGGTVVL 60

Query: 39  GINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           G+    V  +  + AN  + G+ +D C  +  AI    ++++Y+ L  +     + +   
Sbjct: 61  GVREAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLRYMVLTPQNTMPLINNGTA 119

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D    +    L R+  +   F   TY       +    GI+S  QL G ++    GTT  
Sbjct: 120 DFNCASMTNNLTRQKQVA--FGLTTYVSEVRMAVRADSGITSFKQLQGRNVGAITGTTAV 177

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L  Y   + + +  ++ +   E      + R DA+  D + L  +   +  P  + I+
Sbjct: 178 QILRKYASDNELNFKTLMSKDQLESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIV 237

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            ++I   P+A    + D +    V      M+ + EL
Sbjct: 238 GEVIGAEPIAIQFSKNDPQIKKAVDGAILQMIRSGEL 274


>gi|330900038|gb|EGH31457.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330977255|gb|EGH77211.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 261

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 89/261 (34%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L+              FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAMVTAEELGITQKN 260
            V     A      L    + 
Sbjct: 231 KVDEILNAAKADGSLEKASQT 251


>gi|291457470|ref|ZP_06596860.1| glutamate-binding protein [Bifidobacterium breve DSM 20213]
 gi|291381305|gb|EFE88823.1| glutamate-binding protein [Bifidobacterium breve DSM 20213]
          Length = 279

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 89/239 (37%), Gaps = 17/239 (7%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
             +   +   +          G ++ GI     G      +G + GFDVD  + ++  + 
Sbjct: 23  CTMSLAACGQDEP--------GKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYIAKKLG 73

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +I +    +K+R   +Q+  +D++      T  R+    ++F    +  GQ  ++ 
Sbjct: 74  YSEDEIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVAGQDLLVR 131

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I+    L+G  +C   G+T+  T+ + F +   +   +      E   A  +   
Sbjct: 132 KDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECATALFSGIV 188

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           DA T D   L  L   +       ++    ++      I +G+T+    ++     M+ 
Sbjct: 189 DAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGNTQLATKINNAIVDMIQ 245


>gi|227819409|ref|YP_002823380.1| ABC transporter substrate-binding protein [Sinorhizobium fredii
           NGR234]
 gi|227338408|gb|ACP22627.1| putative substrate-binding component of ABC transporter
           [Sinorhizobium fredii NGR234]
          Length = 298

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 4/233 (1%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +S L ++  RG L  G  +    +    A    +GFDVD  R ++ A+F DP KI+Y+  
Sbjct: 45  SSKLDEVLARGHLILGTGSTNAPWHFKSAEDKLQGFDVDMGRIIAKALFGDPDKIEYVNQ 104

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           ++  R   + + ++D+  +    T  R  +  +AF    Y +G G +M      +  + L
Sbjct: 105 SSDARIPNITTDKVDLTCQFMTVTGER--AQQIAFTIPYYREGVGLMMKADGKYADYAAL 162

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
             A   V       +   D   A   +     +E V+ I  A  + R DA   D S+L  
Sbjct: 163 KAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESVDLIYQALESGRADAAATDQSSLAW 222

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
                  P  +       +    A  + +GD +W N V+   +  +T  E   
Sbjct: 223 YMTQ--NPGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDF 273


>gi|329908117|ref|ZP_08274833.1| ABC transporter amino acid-binding protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327546758|gb|EGF31695.1| ABC transporter amino acid-binding protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 255

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 88/250 (35%), Gaps = 15/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F   +   +L     +  A  L +IK  G L          F   + +    GF+
Sbjct: 1   MKRFLFAFSVITGLLL--GPAVQARSLDEIKSAGTLIVATEGAYPPFNYFQGS-KLSGFE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+   +     KI++  L+       L+  + D++  +   T  R  S  + F  
Sbjct: 58  VELAEAMVKKMG---LKIEWKALSFDALLAGLRQDRWDMVMASFGVTEER--SKAVLFTS 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +   G I+ K   I   + L+G ++ VQ G+T    +               F +  
Sbjct: 113 PY-YCSGGVIVSKDAAIKDAATLTGKTVAVQTGSTYMENVKKLAGVK----EVKNFPQDT 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  +A  A R DA+  D         T   P   + + + +    +A A+ +G+      
Sbjct: 168 DARSALVAGRVDAWVSDR--FVVKTATESNPGLGLKVGEYLFVERIAAAVKKGNAPLAAA 225

Query: 241 VSWTHYAMVT 250
           V      ++ 
Sbjct: 226 VDKALAEVIA 235


>gi|26991700|ref|NP_747125.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
 gi|24986801|gb|AAN70589.1|AE016701_9 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
 gi|313501000|gb|ADR62366.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida BIRD-1]
          Length = 266

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +       +  A  + D  KRG L+ G++   + F      G+  GF+
Sbjct: 1   MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      +            AL + + D++      T  R  +L L F  
Sbjct: 61  VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 +
Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHG----Y 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D                 + L +  +  PLA  + +GD +
Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVDKAGAGK-LLFLDEPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|224498994|ref|ZP_03667343.1| hypothetical protein LmonF1_04543 [Listeria monocytogenes Finland
           1988]
 gi|254831313|ref|ZP_05235968.1| hypothetical protein Lmon1_08142 [Listeria monocytogenes 10403S]
          Length = 486

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269


>gi|86357908|ref|YP_469800.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86282010|gb|ABC91073.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 274

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 12/255 (4%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F    L          +  +A+ + +IK +G +  GI      +  V ++G   GFD
Sbjct: 5   RRQFLGMALATAAFATVGAAVASAATVEEIKAKGTIVVGIQGDNAPWGFVDSSGKQDGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D     +  +      +Q+ PL    R  AL + ++DIL      T  R     + +  
Sbjct: 65  ADVATLFAKELGVK---VQFQPLAVANRIPALTTGKVDILFATMAMTEERAK--SIQYSK 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +       K     + + ++G  I V   ++ +  + D   A         F+   
Sbjct: 120 PYAANTISLYAAKADTAKTPADVAGWEIGVPKSSSQDKAITD---AVGSTATVRRFDDDA 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  + +  A  G++   Y  +L    P  +    D ++          G+ +W   
Sbjct: 177 STIQALVSGQVKAVGGNM--FYGQRLDAASPGTYERKIDFLTT-YNGVGTRLGEKDWNEA 233

Query: 241 VSWTHYAMVTAEELG 255
           V+     +    EL 
Sbjct: 234 VNAFLDKIKANGELA 248


>gi|227510178|ref|ZP_03940227.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190383|gb|EEI70450.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 283

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 16/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
            K   V +  L++   +           TN      + K+  +  G++   V       +
Sbjct: 6   KKCPLVIVTLLLMFVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDSFVPMGFETKS 65

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G+DVD  +A+         K+ + P++       L++  ID++         R   
Sbjct: 66  GKIVGYDVDLAKAVFKQYG---IKVDFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAK- 121

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH- 172
             + F      + Q  I  KK  I+S + +      VQAG+   + +    K    +   
Sbjct: 122 -KVTFSEPYLVNKQVLISKKKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180

Query: 173 --PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             PI+++   E      + R      D              + +  +P    K      +
Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQRNRATYQSVPSQFPKEYYGVGM 240

Query: 231 IQGDTEWYNIVSWTHY 246
            +GDT+    +     
Sbjct: 241 RKGDTKLKQKIDAGLN 256


>gi|319638612|ref|ZP_07993374.1| histidine-binding protein [Neisseria mucosa C102]
 gi|317400361|gb|EFV81020.1| histidine-binding protein [Neisseria mucosa C102]
          Length = 270

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 88/257 (34%), Gaps = 12/257 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++ C  +        + +           + G N     F  + + G  +GFD
Sbjct: 3   MKKWLATALACSALALTACGGQSNN--ASAPADKVYRVGSNAEFAPFESLDSAGKVEGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++ A      K+++     +  F +L +  +DI+      T   +    + F  
Sbjct: 61  VDLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLFSD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  ++ K K ++S   L     + V  G T + +++      N       FE V
Sbjct: 116 PYFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFESV 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             I         D+   D + +      N  +  + + LPD  +      A  +GD    
Sbjct: 174 PLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEATI 232

Query: 239 NIVSWTHYAMVTAEELG 255
            +++     +  + E  
Sbjct: 233 KMLNDALKKVRESGEYD 249


>gi|76809564|ref|YP_333374.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710b]
 gi|254179931|ref|ZP_04886530.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1655]
 gi|254261060|ref|ZP_04952114.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710a]
 gi|254297763|ref|ZP_04965216.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 406e]
 gi|76579017|gb|ABA48492.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710b]
 gi|157806758|gb|EDO83928.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 406e]
 gi|184210471|gb|EDU07514.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1655]
 gi|254219749|gb|EET09133.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710a]
          Length = 284

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 19/252 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K   V+ L +   F  + +  A +L ++K+RG L+ G+      F      G+ 
Sbjct: 21  MKIASLKKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 79

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L
Sbjct: 80  VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDPRK--QTL 134

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F P   F     I  K       S+  L G  + V  GT                    
Sbjct: 135 DFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 189

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E      A R DA   D   L  L      P       ++ S +P      +G+
Sbjct: 190 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGN 247

Query: 235 TEWYNIVSWTHY 246
            ++   ++    
Sbjct: 248 PKFAKAIADAMT 259


>gi|16079454|ref|NP_390278.1| High affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310318|ref|ZP_03592165.1| hypothetical protein Bsubs1_13156 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314642|ref|ZP_03596447.1| hypothetical protein BsubsN3_13077 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319565|ref|ZP_03600859.1| hypothetical protein BsubsJ_12998 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323841|ref|ZP_03605135.1| hypothetical protein BsubsS_13127 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321311879|ref|YP_004204166.1| High affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis BSn5]
 gi|1731062|sp|P54535|ARTP_BACSU RecName: Full=Arginine-binding extracellular protein ArtP; Flags:
           Precursor
 gi|1303949|dbj|BAA12604.1| YqiX [Bacillus subtilis]
 gi|2634832|emb|CAB14329.1| High affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|320018153|gb|ADV93139.1| High affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis BSn5]
          Length = 255

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 97/255 (38%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   I    T+  ++ S     KK   L  G +     F   + + +  GFD
Sbjct: 1   MKKWLLLLVAACITFALTACGSSNSGSESGKK--KLIMGTSADYKPFEYKEGD-NIVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  +AL+     +   I+   ++      AL+SKQ+D++      T  R+    + F  
Sbjct: 58  VELAKALAKKAGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKK--QVDFSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y      +  K  GI S+  L G ++ VQ G+  E    +    +  K       R+ 
Sbjct: 113 VYYTANHMIVSKKDSGIQSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFKTEDR--NRIS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++    ++ R DA   +          ++   +  ++PD  ++   +    + D+E  + 
Sbjct: 171 DLVQEIKSDRFDAAIIEDIVAEGY-FKSNDDLQGFVIPDAKAEEAGSAIAFRKDSELTDK 229

Query: 241 VSWTHYAMVTAEELG 255
            +     M    EL 
Sbjct: 230 FNKALKEMEDNGELE 244


>gi|119025598|ref|YP_909443.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium adolescentis ATCC 15703]
 gi|118765182|dbj|BAF39361.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 270

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 9/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G ++ GI     G      NG + GFDVD  + ++  +     +I +    +K+R   
Sbjct: 25  ETGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAM 83

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+  +D +  +   T  R+    + F    +  GQ  ++ K +  I     L+G  +C 
Sbjct: 84  LQNGDVDYIVASYSITDERKKV--VDFAGPYFVAGQDLLVRKDETGIDGPKDLNGKRLCS 141

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             GTT+ + + + F     +   +    + E   A  +   DA T D   L  L   +  
Sbjct: 142 MTGTTSAVNVKEKFAK---QTQLMEQPGMAECATALLSGIVDAATTDDIILAGLASASR- 197

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                ++    ++      + +G+TE  N ++     M+ 
Sbjct: 198 -GRLRVVGKPFTQEYYGIGVKKGNTELKNKINNAITDMIQ 236


>gi|325913427|ref|ZP_08175793.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           UPII 60-B]
 gi|325477196|gb|EGC80342.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           UPII 60-B]
          Length = 273

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
                +   ++   +K+   +  G       F  +   +    GF++D  +A++  +   
Sbjct: 21  GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +  +++    K R   L+++ I+ +      T  R+    + F       G   ++   
Sbjct: 81  DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I  V QL+   +    GTT    +             + ++   +  +A +A +  A 
Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAM 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T D   L  +    + P  H ++    +  P   A+ +G  E  + ++    A+
Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 245


>gi|313632221|gb|EFR99286.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri
           FSL N1-067]
          Length = 256

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 93/260 (35%), Gaps = 24/260 (9%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K+F   +  + ++F           +       L  I+++G L  G++     +    
Sbjct: 1   MQKNFLQKLAAIALIFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K      +SV+  +G  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++     +++ DA   +     A    +   +   I  +  SK   
Sbjct: 174 --VGSDVVSLQKVPDLLLNLSSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFENGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHY 246
           A A+ +G T     V+ +  
Sbjct: 231 AIALPKGSTALQEKVNASIK 250


>gi|261416888|ref|YP_003250571.1| extracellular solute-binding protein family 3 [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261373344|gb|ACX76089.1| extracellular solute-binding protein family 3 [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302327529|gb|ADL26730.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 263

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 88/256 (34%), Gaps = 17/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F +          ++         +        +K  G    G++           
Sbjct: 1   MKKFFAILAAFACAAVLSACNDQKAETKTAADDSFNKVKAAGVFVLGLDDSFPPMGFRDK 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           + +  GFD+D    + + +     K++  P++   +   L + +ID +         R  
Sbjct: 61  DNNIVGFDIDLATEVCARLG---IKLKTQPISWDAKEQELNTGKIDCIWNGMSVDSDRAR 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            + L        +       K K I++++ L+G  I VQ G+T +  L +  +A      
Sbjct: 118 VMNL--SDAYLKNRM-IFTVKDKAITNLAALAGKKIAVQNGSTAQKLL-ETSEAGKAAKE 173

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F+  +           DA   D        +TN +P  +++L + +S    A    +
Sbjct: 174 IVPFDDNQTALMDLDKGGVDAVFLDEIVAKYWIVTNAKP--YIVLEEGLSDEVYAVGFRK 231

Query: 233 GDTEWYNIVSWTHYAM 248
            D    + V+    AM
Sbjct: 232 KDQALRDSVNNVLDAM 247


>gi|300717207|ref|YP_003742010.1| L-cystine ABC transporter, extracellular solute-binding protein
           [Erwinia billingiae Eb661]
 gi|299063043|emb|CAX60163.1| L-cystine ABC transporter, extracellular solute-binding protein
           [Erwinia billingiae Eb661]
          Length = 267

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 16/249 (6%)

Query: 2   YKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            +   +  + L ++      +F+ + ++L  +K+RG L  G+      F+    NG   G
Sbjct: 7   RRRLVMGAVSLALVAGFSVNAFAADENLLSKVKERGSLLVGLEGTYPPFSFQDENGKLAG 66

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VDF  AL+  +          P        +L SK+ID++      +  R+      F
Sbjct: 67  FEVDFADALAQHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDF 121

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                  G   +  K+    IS    LSG  + V  G+  E  L    +A+        +
Sbjct: 122 STPYTISGIQALTKKENAASISKPEDLSGKKVGVGLGSNYEQWL----RANVKGVDIRTY 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +         R  R +A   D   L AL L     +   +     S+     A+ +G+T+
Sbjct: 178 DDDPTKYQDLRVGRINAILVDR--LAALDLVKKTGNTLAVAGPAFSRQESGVALRKGNTQ 235

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 236 LLDAINKAI 244


>gi|53719480|ref|YP_108466.1| putative ABC transporter cystine-binding protein [Burkholderia
           pseudomallei K96243]
 gi|53723464|ref|YP_102925.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|67640271|ref|ZP_00439084.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Burkholderia mallei GB8 horse 4]
 gi|121601368|ref|YP_993059.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei SAVP1]
 gi|124385440|ref|YP_001026394.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126439839|ref|YP_001058845.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 668]
 gi|126450875|ref|YP_001080333.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|126455413|ref|YP_001066091.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|134282256|ref|ZP_01768961.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 305]
 gi|167003921|ref|ZP_02269700.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Burkholderia mallei PRL-20]
 gi|167719753|ref|ZP_02402989.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei DM98]
 gi|167738748|ref|ZP_02411522.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 14]
 gi|167845887|ref|ZP_02471395.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei B7210]
 gi|167894457|ref|ZP_02481859.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 7894]
 gi|167902858|ref|ZP_02490063.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167911101|ref|ZP_02498192.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 112]
 gi|167919121|ref|ZP_02506212.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei BCC215]
 gi|217423617|ref|ZP_03455118.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 576]
 gi|226196423|ref|ZP_03792005.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237812103|ref|YP_002896554.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei MSHR346]
 gi|242315262|ref|ZP_04814278.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1106b]
 gi|254177632|ref|ZP_04884287.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 10399]
 gi|254188664|ref|ZP_04895175.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254197646|ref|ZP_04904068.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei S13]
 gi|254199867|ref|ZP_04906233.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei FMH]
 gi|254206195|ref|ZP_04912547.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei JHU]
 gi|254358593|ref|ZP_04974866.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei 2002721280]
 gi|52209894|emb|CAH35866.1| putative ABC transport system, cystine-binding protein
           [Burkholderia pseudomallei K96243]
 gi|52426887|gb|AAU47480.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|121230178|gb|ABM52696.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei SAVP1]
 gi|124293460|gb|ABN02729.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126219332|gb|ABN82838.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 668]
 gi|126229055|gb|ABN92595.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|126243745|gb|ABO06838.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|134246294|gb|EBA46383.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 305]
 gi|147749463|gb|EDK56537.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei FMH]
 gi|147753638|gb|EDK60703.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei JHU]
 gi|148027720|gb|EDK85741.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei 2002721280]
 gi|157936343|gb|EDO92013.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160698671|gb|EDP88641.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 10399]
 gi|169654387|gb|EDS87080.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei S13]
 gi|217393475|gb|EEC33496.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 576]
 gi|225931640|gb|EEH27645.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237502856|gb|ACQ95174.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei MSHR346]
 gi|238520963|gb|EEP84418.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Burkholderia mallei GB8 horse 4]
 gi|242138501|gb|EES24903.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1106b]
 gi|243060613|gb|EES42799.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Burkholderia mallei PRL-20]
          Length = 264

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 19/252 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K   V+ L +   F  + +  A +L ++K+RG L+ G+      F      G+ 
Sbjct: 1   MKIASLKKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  +A+++ +   P    ++          LQ+ + D++      T  R+    L
Sbjct: 60  VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDPRK--QTL 114

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F P   F     I  K       S+  L G  + V  GT                    
Sbjct: 115 DFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E      A R DA   D   L  L      P       ++ S +P      +G+
Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGN 227

Query: 235 TEWYNIVSWTHY 246
            ++   ++    
Sbjct: 228 PKFAKAIADAMT 239


>gi|283783251|ref|YP_003374005.1| extracellular solute-binding protein [Gardnerella vaginalis 409-05]
 gi|283441644|gb|ADB14110.1| bacterial extracellular solute-binding protein, family 3
           [Gardnerella vaginalis 409-05]
          Length = 277

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 94/253 (37%), Gaps = 14/253 (5%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       F +IL ++          A        +  ++ GI     G      +G + 
Sbjct: 1   MKILQNRIFRAILAMLCTICCVMPLTAC--DRSDGKKVIRIGIKFDQPGMGFK-KSGTYV 57

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  + ++  +     +I +    +K+R   LQ+  +D++      T  R+    ++
Sbjct: 58  GFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETMLQNGDVDMIVATYSITDARKKM--VS 115

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    +  GQ  ++ K +  +S  + L G  +C  +G+T+ + + + + +   K   +  
Sbjct: 116 FAGPYFIAGQDLLIRKDEHKVSGPNDLDGKRLCSVSGSTSAIAIKERYSS---KVQLMQQ 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E   A  +   DA T D   L  L   +       ++    +       I +G+T 
Sbjct: 173 PGYAECATALFSGIVDAVTTDDIILAGLATASR--GRLKLVNKPFTAEYYGIGIKKGNTG 230

Query: 237 WYNIVSWTHYAMV 249
               ++     M+
Sbjct: 231 LAKKINAALKDMI 243


>gi|237667290|ref|ZP_04527274.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|237655638|gb|EEP53194.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 272

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 15/254 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M        +  + I+     S         +  G    +  L  G++   V       +
Sbjct: 1   MKVNKLIKGLAVVGIVVAMGVSVIGCGSSSKTSSGSTLDKDELIIGLDDTFVPMGFKDES 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  GFD+D  +A+   +      +++  ++   +   L    ID++         R+  
Sbjct: 61  GELVGFDIDLAKAVGEKLNKK---VKFQAIDWSMKETELNGGNIDLIWNGYSINDERKE- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKY 171
             + F      + Q  +      I+S + L+G  +  Q  +T    +       +     
Sbjct: 117 -KVEFSKPYLNNTQIIVTLADSTINSKADLAGKKVGAQNQSTAVDAVEADGDIMSTFDGG 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + + FE   +      A R DA   D   L    +      ++ IL +          I 
Sbjct: 176 NLVTFEDNNQALMDLEAKRLDAIVVDE-ILARYYIKARGEEKYKILTENFGDEQYGVGIR 234

Query: 232 QGDTEWYNIVSWTH 245
           +GDT++    +   
Sbjct: 235 KGDTKFVEAFNKAL 248


>gi|307132300|ref|YP_003884316.1| putative amino acid ABC transporter periplasmic protein [Dickeya
           dadantii 3937]
 gi|306529829|gb|ADM99759.1| Putative amino acid ABC transporter, periplasmic protein [Dickeya
           dadantii 3937]
          Length = 263

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 91/247 (36%), Gaps = 13/247 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K F  +++   +L   +    A  L DI+KRG L+  +      F  V  +   +G
Sbjct: 1   MKIGKRFL-AVVGAALLMVQAGQVMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  R L+S +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F
Sbjct: 60  YDIDMARYLASEM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    G    K   + +   L G ++ V  G   ++ L +             +E 
Sbjct: 115 SRAYAPFFLGVFGPKDTDVGAPEALQGKTVGVTRGAVEDMVLTETAPK---TADIKRYED 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                +AY + +          + A+      P++  +   ++  SP    + + +    
Sbjct: 172 NNTTLSAYLSGQVQYIATGNLVIAAIA--EKNPAKAPVAKFMLKDSPCYIGLKKDEPALK 229

Query: 239 NIVSWTH 245
             +    
Sbjct: 230 AKIDELI 236


>gi|145593977|ref|YP_001158274.1| extracellular solute-binding protein [Salinispora tropica CNB-440]
 gi|145303314|gb|ABP53896.1| extracellular solute-binding protein, family 3 [Salinispora tropica
           CNB-440]
          Length = 294

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 86/227 (37%), Gaps = 9/227 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S +  + +   +K G      GF     +G+ +GFDV+  + ++  +     KI+++
Sbjct: 41  AAGSTMERLNEAQAIKIGTKFDQPGFGLKGLSGEPEGFDVEIAKIIAKELGIPEDKIEWV 100

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
              +K R   +    +D++         R+    ++F    Y  GQ  ++ K     +  
Sbjct: 101 ETPSKVREDKIADGSVDMIVATYTIKDERKE--RVSFAGPYYEAGQNIMVKKDDTSITGP 158

Query: 142 QLSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +        IC   G+T    +  Y K  ++    + F+  ++   A ++ + DA T D 
Sbjct: 159 ESFQDGSKKICSVTGSTPIEEIKKYLK--DIPSQLVPFDTYDKCRDALQSGQVDAVTTDN 216

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L       D      +  +  +K P    + + D E+ + ++   
Sbjct: 217 VILLGYIA--DDEDAFKLAGENFTKEPYGIGVKKDDAEFRDFINDIL 261


>gi|90579334|ref|ZP_01235144.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Vibrio angustum S14]
 gi|90440167|gb|EAS65348.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Vibrio angustum S14]
          Length = 258

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 88/261 (33%), Gaps = 23/261 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K         +I    + +  A      K+   ++ GI      F+  + NG+ KGFD
Sbjct: 1   MKKWIL---AATLISAMGASAVQA------KEWKEVRFGIEGAYPPFSWTEPNGELKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     K + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCTQM---QVKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K   +    + L G  I VQ  TT +  L D F         + +   
Sbjct: 107 KYALIPNKFVAKKGTELDFTKEGLKGVKIGVQRATTHDKYLTDNF---GESVEIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E     +A R  +  GD SAL    L  D       +   ++           A+ + D
Sbjct: 164 DEAYLDLKAGRIASVLGDASALEEGLLNKDGGEGFEFIGPSLTDPKWFGEGFGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    +     A+    +  
Sbjct: 224 KDLTKKLDEAILALRENGQYK 244


>gi|163855575|ref|YP_001629873.1| ABC transporter, substrate binding protein [Bordetella petrii DSM
           12804]
 gi|163259303|emb|CAP41603.1| ABC transporter, substrate binding protein [Bordetella petrii]
          Length = 279

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 89/228 (39%), Gaps = 6/228 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T+ + ++S L  +     L+CGI              + +G+DV +C+ ++ A+    
Sbjct: 22  TGTAQAQSSSTLDRVINSKTLRCGIQLDYPPAGFRTPQNEPEGYDVAYCKDMAKALGATA 81

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++     + ER  +L S +ID+L  +T  T  R  +L +AF           + HK  
Sbjct: 82  QIVE---TPSAERIPSLVSNRIDVLIASTSITPQR--ALSVAFSQPYVSFINVAMTHKDT 136

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           G+     L G +I    G+TTE  L   F K ++ K   I +    E   A    + D  
Sbjct: 137 GVQKFDDLKGRTIGGVTGSTTEQELRAIFNKWNDPKGKFISYGSESEAFLALNQRKIDGL 196

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                   AL  +   P+  +          +  A+ + D ++   ++
Sbjct: 197 IVSAGTAGALVKSGQFPALQIKGEAPSPADLVGIAVRKSDADFLRWIN 244


>gi|309808664|ref|ZP_07702556.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 01V1-a]
 gi|308168138|gb|EFO70264.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 01V1-a]
          Length = 273

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
                +   ++   +K+   +  G       F  +   +    GF++D  +A++  +   
Sbjct: 21  GGCGHAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +  +++    K R   L+++ I+ +      T  R+    + F       G   ++   
Sbjct: 81  DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I  V QL+   +    GTT    +             + ++   +  +A +A +  A 
Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T D   L  +    + P  H ++    +  P   A+ +G  E  + ++    A+
Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 245


>gi|271500708|ref|YP_003333733.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270344263|gb|ACZ77028.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 278

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 19/251 (7%)

Query: 4   DFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
             F S L L+ L   +         +   S L  + +RG L+ G       F      G+
Sbjct: 11  RLFASALVLLTLAGCTPTDEKKADNAAPQSALQTVLQRGTLRVGDCLSFAPFGFYDQAGN 70

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  +AL+ A+      ++ +   +  R   LQ+ ++D++  N    L R     
Sbjct: 71  PDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAK--E 125

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           ++F        +  ++ K  GI S   ++G +I    G+T      D  +   +      
Sbjct: 126 ISFTAPYVVASEAMLVRKNSGIQSAHDMAGKTIATVKGSTN----GDEVRNLGIDVKIQE 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  +    A +  + DA   D + L     +    +  V    ++     A  + QGD 
Sbjct: 182 YDSSQAAILAVKQGQADAMIEDNNFLA--YQSKLDSTLTVTNEALVPLEYNAFGVKQGDQ 239

Query: 236 EWYNIVSWTHY 246
            W N ++   +
Sbjct: 240 VWLNYLNEFLF 250


>gi|89899053|ref|YP_521524.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89343790|gb|ABD67993.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 266

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 11/244 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L        + + +AS L DI+KRG L+  + T    F+ +  NG+  G  
Sbjct: 3   MSNFLPAILLACAGFAGVAATAHASTLDDIQKRGELRIAVQTQGPPFSMIDKNGERTGSS 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + ++  +        +L L+      AL S + D+L+ +   TL R     +AF  
Sbjct: 63  VELAKLMAKEMGVKA---VFLDLDWDGLLPALISGKADLLAADMTPTLARAT--KVAFTK 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              + G           +S +     G  I V  G+T E      F+   +K        
Sbjct: 118 PFIYIGPVVAAKAGSKFTSTAACKAPGTKIAVLFGSTGEKLAKTVFEKGEIKS---YKGG 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +  A +  + D    D SA+          +   ++P++++K PLA A      +  
Sbjct: 175 GTLLLDAVKNGQADCLLNDSSAVAGQAAGYPAGT-FKVMPELLAKEPLAYATRYDSLDLL 233

Query: 239 NIVS 242
             ++
Sbjct: 234 TWIN 237


>gi|260881511|ref|ZP_05404585.2| amino acid ABC transporter, amino acid-binding protein [Mitsuokella
           multacida DSM 20544]
 gi|260848627|gb|EEX68634.1| amino acid ABC transporter, amino acid-binding protein [Mitsuokella
           multacida DSM 20544]
          Length = 270

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 12/254 (4%)

Query: 1   MY-KDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M  K        +++    +        A        +G +  G++           N +
Sbjct: 3   MKWKKILALGMAAVMTAAFVTGCGGQKAADNGSGSGDKGKIIVGLDDNFPPMGFKDENNE 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD  +  S  +  +   +++  ++   +   L+S ++++L    D T  R+    
Sbjct: 63  ITGFDVDLAKEASKRLGRE---VEFKAIDWSSKEAELKSGRVNVLWNGLDITEKRKE--N 117

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F      + Q   + K +  I+    L+G  +  Q+ +T E  +              
Sbjct: 118 MLFSDPYMDNRQIIFVKKGRTDITDEKSLAGKIVGTQSASTAEEYMDKTDFFKKDVKEVK 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +             R DA  GD          +    + V +  +   S    A  + +
Sbjct: 178 KYSDFVTAFMDLENGRVDAIVGDEIVGRYYMSKHPEAIDAVDVA-VGPVSQFGIAFAKDN 236

Query: 235 TEWYNIVSWTHYAM 248
               + V      M
Sbjct: 237 KALRDDVQKVLDEM 250


>gi|146282694|ref|YP_001172847.1| cystine transporter subunit [Pseudomonas stutzeri A1501]
 gi|145570899|gb|ABP80005.1| cystine ABC transporter, periplasmic cystine binding protein
           [Pseudomonas stutzeri A1501]
          Length = 264

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 81/227 (35%), Gaps = 13/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A +L +IK  G L+ G+      F     +G+  GF+VDF  AL+  +        +
Sbjct: 26  AFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALAEELGVKAE---F 82

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138
            P        AL+SK++D++      +  R+      F       G   +  K     I 
Sbjct: 83  QPTKWDGILAALESKRLDVVINQVTISEERK--QKYDFSTPYTVSGIQALTRKADADSIK 140

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G  + V  GT  E  L    K +  +     ++            R D    D 
Sbjct: 141 LPTDLAGKKVGVGLGTNYEQWL----KENVPQADIRTYDDDPTKFQDLAVGRIDVILVDR 196

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L A ++     +   +  +  S+     A+ +G+ +    ++   
Sbjct: 197 --LAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEAI 241


>gi|139439419|ref|ZP_01772860.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC
           25986]
 gi|133775198|gb|EBA39018.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC
           25986]
          Length = 291

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 93/255 (36%), Gaps = 29/255 (11%)

Query: 2   YKDFF----VSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAE 49
            + F       +L L     T    +         S L  IK RG L  G+   + G+  
Sbjct: 13  RRRFLQLAGAGMLALTGTALTGCGNSTSGEGSDKGSKLAAIKSRGHLNAGVKKDVPGYGY 72

Query: 50  VK-ANGDWKGFDVDFCRALSSAIFD-------DPSKIQYLPLNAKERFLALQSKQIDILS 101
              A G ++G +VD C  +++A+F            +++  +  K R   + + Q+D+++
Sbjct: 73  YDTAKGRFEGMEVDLCYQIAAAVFGVSYKEARAQELVEFTDVTPKTRGPLIDNGQLDVVA 132

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  R+      F      D  G ++ K+ G +S+  L G  I V  G TT+  + 
Sbjct: 133 ATYTITDERKK--SWDFSTPYRTDYVGLMVKKRSGFTSIEDLDGKVIGVSQGATTQSLIE 190

Query: 162 DYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
              K +     P    F     I ++  A   D +  D S L          +  ++ P+
Sbjct: 191 QMIKDNGFSCKPEFRAFSGYPIIKSSLDAGNIDVFAMDRSTLAGYM----NETVELLQPE 246

Query: 220 IISKSP-LAPAIIQG 233
           +         A  +G
Sbjct: 247 VKFGEQGYGVATKKG 261


>gi|295689321|ref|YP_003593014.1| extracellular solute-binding protein family 3 [Caulobacter segnis
           ATCC 21756]
 gi|295431224|gb|ADG10396.1| extracellular solute-binding protein family 3 [Caulobacter segnis
           ATCC 21756]
          Length = 261

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 90/261 (34%), Gaps = 16/261 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +   +S L L +L       ++ +     IK  G L+ G+      F    A+G   GF+
Sbjct: 6   RRAVISGLGLALLAACGKKPDSDVSGWDRIKASGTLRIGLEGTYPPFNFQGADGQLTGFE 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF +AL++ +   P    + P        AL+S ++D++      T   +      F  
Sbjct: 66  VDFAKALAAQLGLKPE---FRPAPFAGLLGALESGRVDVVINQITITP--DRKDKYDFSE 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                G   I  K K   S    L+G  + V  GT  E  L    +A+        ++  
Sbjct: 121 PYTISGIQIITLKAKPGPSNPDELAGKKVGVGLGTNYEQWL----RANVPTADVRTYDDD 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  +A R DA   D         T+    E V      +      A+ + D     
Sbjct: 177 PTKYQDLKAGRIDAVLNDRLVAADFVKTSP---EFVASGPPFAAQGAGVAMKK-DAALKV 232

Query: 240 IVSWTHYAMVTAEELGITQKN 260
           I+     A+  + +L    + 
Sbjct: 233 IIDQAIDALRASGKLSAMSQQ 253


>gi|239834032|ref|ZP_04682360.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239822095|gb|EEQ93664.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 280

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 87/254 (34%), Gaps = 12/254 (4%)

Query: 3   KDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +   ++ +    L    + +  A  +  IK  G +K G+      F  +  + +  G+D 
Sbjct: 19  RRLAMAFIGAGALATVLAPAAFAQTVDGIKSAGKIKIGMLVDFPPFGIMNTSNEPDGYDA 78

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  I  +   +    +    R   LQS Q+D+L  +   T  R     + F   
Sbjct: 79  DVAKLLAKEIGVEAQIVP---VTGPNRIPYLQSGQVDVLVASLGITEERAK--SVDFSQP 133

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   ++    LSG +I V   +T +  +           +   F+    
Sbjct: 134 YAGISIGVFGPKDIAVAKPEDLSGKTIGVARASTQDTAVTKVAPQ---DANIRRFDDDAS 190

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  + + +     +S + A ++    P  +      +S+     A+ +G  E    V
Sbjct: 191 AVQALLSGQVELI--GLSNVVAAEIEKAAPGRYEQ-KIQLSQQVQGIAVRKGSAEMLEFV 247

Query: 242 SWTHYAMVTAEELG 255
           +       +  EL 
Sbjct: 248 NKFIEKAKSDGELN 261


>gi|332107601|gb|EGJ08825.1| polar amino acid transporter substrate-binding protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 270

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 14/254 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L DI+K G L+         F  V A      G DVD+  A +  +      +Q +P 
Sbjct: 24  DRLADIQKAGVLRVAAFDANPPFGYVDAKTKKIVGLDVDYAEAFAKKLGVK---LQIVPT 80

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           N   R   L S ++D++  N   T  R   +G  F    +  G  FI  K   + S  QL
Sbjct: 81  NPANRVPLLASNKVDLVFANFTITEERAKVVG--FSIPYFASGTQFIARKG-TLKSPEQL 137

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           SG  I V  GTT E+ L + +         + ++       A R     A + D   L  
Sbjct: 138 SGLRIGVDKGTTNEIQLREKYPQA----TLVAYDDTPFAFTALRNGNVQAISQDGPKLIG 193

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           L        ++ I P  IS+  +   I +G+T     V+ T    +  E  G  QK  + 
Sbjct: 194 LLANVPDRDKYEIPPFAISQDYIGVGIPKGETALTEFVNKTL---LELEADGRAQKIYDT 250

Query: 264 VSKDTTNPDVQRFL 277
               TT   ++R  
Sbjct: 251 WFGPTTKTPLKRIF 264


>gi|158425494|ref|YP_001526786.1| putative amino acid ABC transporter periplasmic solute-binding
           protein [Azorhizobium caulinodans ORS 571]
 gi|158332383|dbj|BAF89868.1| putative amino acid ABC transporter periplasmic solute-binding
           protein [Azorhizobium caulinodans ORS 571]
          Length = 312

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 86/256 (33%), Gaps = 15/256 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
                +L    + +   +  A+         I  +G L+ G+      +     +G + G
Sbjct: 38  KAVRVLLATGFVSWAVPAAQAATPMPSPPELITSQGVLRAGVRCDQPPYGFQDGSGAFAG 97

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            + D  R ++  IF    K+++  + A+ R   L  K++D+L      T  R+    + F
Sbjct: 98  VETDMARQIADWIFGSKDKVEFTCVTAENRIPQLTGKRVDLLIATLGVTPERQRV--IDF 155

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                +   G ++        V+ L   ++ +  GT       D           +    
Sbjct: 156 SIPYRWGASGLLVRADSPFQKVADLDHHTVVMPKGTVQAKWFEDMMP----GVKTLRLNT 211

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +   A +  R D Y  D + L      +       +L D    S ++  + + +  W 
Sbjct: 212 AADSLQALKQGRADGYAHDAATLVVAAAQDK---SLRLLNDPYQTSEVSIGLRKDEPTWK 268

Query: 239 NIVSWTHYAMVTAEEL 254
             +       + AE+L
Sbjct: 269 TYLDAAV-ERMHAEKL 283


>gi|330810053|ref|YP_004354515.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327378161|gb|AEA69511.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 272

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 6/246 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L +++        +A  L DI   G L+C +            +    GFD
Sbjct: 1   MKNPALAVALSVVLTPLFIAPAHADKLDDIIGSGKLRCAVTLDFPPMGFRDESNKPAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L+  +  D   ++       +R  AL S + D++  +T  TL R  ++GL    
Sbjct: 61  VDYCNDLAKVLGVDAEVVE---TPFSDRIPALLSGRADVIVASTSDTLERAKTVGL--TV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +     GI+S + L G ++   + T   + L    K+         ++   
Sbjct: 116 PYFAFQMVVLTRDNTGITSYADLKGKALGNTSSTYEAIALEKDQKSWGSG-SFRAYQSQN 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A      DA     +   A   +       +          ++    + +    N 
Sbjct: 175 DTLLAVAQGHIDATVVTNTVAAATIKSGKYKGLKIAGDAPYVIDYVSLGAKRSEYGLLNY 234

Query: 241 VSWTHY 246
           ++    
Sbjct: 235 LNLFVN 240


>gi|295676371|ref|YP_003604895.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295436214|gb|ADG15384.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 264

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 15/237 (6%)

Query: 13  IILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           I    ++ + +A  +L  +K+RG L+ G+      F     +G+  G+DVD  +A+++ +
Sbjct: 15  IGASLSAVAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKL 74

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
              P    ++          LQ+ + D++      T  R+    L F P   +     I 
Sbjct: 75  GVKP---VFVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QTLDFSPAYTYSAAQLIQ 129

Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            K      +S+  L G  + V  GT                     +    E      A 
Sbjct: 130 RKDDTRQFTSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGAPEYLRDLAAG 184

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           R DA   D   L  L   ++ P       ++ + +P      +G+ ++   +     
Sbjct: 185 RLDAALNDRLMLAYLLKNSNLP--LRTGANVGTGNPSGIPFKKGNPKFAQAIDEAMT 239


>gi|229086726|ref|ZP_04218893.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-44]
 gi|228696600|gb|EEL49418.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-44]
          Length = 261

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 12/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKAN--GDW 56
           M K   +S   ++I+   S  +          K +  L  G +     +  V+A+   + 
Sbjct: 1   MKKLLSISFALILIVSMFSACSKGETKESNTKKDKKVLVMGTSADYKPYEYVEASKSDEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  + +   +  +   I+   ++      +L S ++D +      T  R+     
Sbjct: 61  IGFDVDIAKYIGKELGYE---IKIKDMDFGGLLASLNSGKVDFVMAGMTPTPERKK--NA 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  I +      +  K  GI S+  L    + VQ G+  E    D+     +K+     
Sbjct: 116 DFTDIYFVAKNMIVSKKDSGIQSLQDLKDKKVGVQTGSIQEEKAEDF--QKQVKFEAQGR 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +R+ EI    +A R DA   + +             + + +P+   +   A A+ +   +
Sbjct: 174 DRIPEIVQEIQAGRFDAAILEDTVAKNYLEKMK-GLQGIEIPEAPEEVGSAIALPKNSDK 232

Query: 237 WYNIVSWTHYAMVTAE 252
                          E
Sbjct: 233 TEEFNKVIKKMQENGE 248


>gi|323698676|ref|ZP_08110588.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323458608|gb|EGB14473.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 265

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 12/246 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +L L++    + +  +  L  IK  G LK  +      F  V  +    G+D+D
Sbjct: 10  KMVLACMLALVLACGPALA--SDTLSQIKDAGVLKVAVPQDFPPFGSVGPDMQPLGYDID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +++ +      ++ +P+ +  R   L + ++D++  +      R     + F    
Sbjct: 68  MASLIAAKLGVK---VKLVPVTSTNRIPYLTTGKVDLVISSLGKNPKRAAV--IDFSDAY 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G      + ++  + L+  ++ V  G+  +L L               FE     
Sbjct: 123 APFFNGVFGTSDEKVAGPADLADKTVAVTRGSIEDLELTKVAPE---STVIKRFEDNSST 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            AAY+  + D          ++     +P++ +    +I  SP    I +        V+
Sbjct: 180 IAAYQTGQVDLVATGNVVAASI--NEKKPAKMLETKFMIKNSPCYVGIAKDQPALMAKVN 237

Query: 243 WTHYAM 248
                 
Sbjct: 238 AIIAGA 243


>gi|212716832|ref|ZP_03324960.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660117|gb|EEB20692.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM
           16992]
          Length = 301

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  L +IKK G LK  + +    F  +   G   G+DV F   L   +      ++Y  +
Sbjct: 54  ARTLDEIKKSGELKVAVFSDKAPFGYIDKEGKNAGYDVYFAERLGKDLGVK---VKYTSV 110

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +   R   L S ++DI   N   T  R+    + F         G +  +   I+ VSQL
Sbjct: 111 DPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENAEITDVSQL 168

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ +  GTT E      F+ +        +++  +   A    R DA++ D + + A
Sbjct: 169 KGKTLIIAKGTTAESY----FEKNEPDVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 224

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                      V +  +  +  +APA+ +G+ E  N ++ 
Sbjct: 225 WA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLNWLND 262


>gi|220932713|ref|YP_002509621.1| extracellular solute-binding protein family 3 [Halothermothrix
           orenii H 168]
 gi|219994023|gb|ACL70626.1| extracellular solute-binding protein family 3 [Halothermothrix
           orenii H 168]
          Length = 244

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 85/244 (34%), Gaps = 21/244 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L+++      +                G +     F  V  +G++ GFD
Sbjct: 1   MKKLSIILVTLLLVMLAGIGVSAE----------KYVVGTSADFPPFEYV-EDGEFVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA++     +  +++   ++      AL+S  IDI       T  RE    + F  
Sbjct: 50  MDLIRAIAE---VEGFEVEIRDMSFDSLIAALKSGNIDIAIAGMTITEKREKV--VDFSI 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             Y   Q  I+ +   ++        ++ VQ  TT +L + D  +   +     + ++  
Sbjct: 105 PYYTANQSVIVKEDSDLNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVRYDTF 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                       DA   D     A +  +  P     +  II+       + +G+ +  N
Sbjct: 165 VLAVTDLVNGNLDAIVLDSP--VAERFVDSHP--LKEVGIIITGEEYGIVVNEGNKDLLN 220

Query: 240 IVSW 243
            ++ 
Sbjct: 221 KINN 224


>gi|291484836|dbj|BAI85911.1| hypothetical protein BSNT_03569 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 255

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   I    ++  ++ S     KK   L  G +     F   + + +  GFD
Sbjct: 1   MKKWLLLLVAACITFALSACGSSNSGSEGGKK--KLIMGTSADYKPFEYKEGD-NIVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  +AL+     +   I+   ++      AL+SKQ+D++      T  R+    + F  
Sbjct: 58  VELAKALAKKAGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKK--QVDFSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y      +  K  GI S+  L G ++ VQ G+  E    +    +  K       R+ 
Sbjct: 113 VYYTANHMIVSKKDSGIQSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFKTEDR--NRIS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++    ++ R DA   +          ++   +  ++PD  ++   +    + D+E  + 
Sbjct: 171 DLVQEIKSDRFDAAIIEDIVAEGY-FKSNDDLQGFVIPDAKAEEAGSAIAFRKDSELTDK 229

Query: 241 VSWTHYAMVTAEELG 255
            +     M    EL 
Sbjct: 230 FNKALKEMEDNGELE 244


>gi|325496960|gb|EGC94819.1| cystine transporter subunit [Escherichia fergusonii ECD227]
          Length = 288

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 36  VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 95

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 96  LAKHLGVEA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTVSG 150

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 151 IQALVKKGNEGTIKTANDLKGKKVGVGLGTNYE----EWLRQNVQGVDIRTYDDDPTKYQ 206

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  D  S+     A+ + + +    V+  
Sbjct: 207 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 264

Query: 245 H 245
            
Sbjct: 265 I 265


>gi|237654574|ref|YP_002890888.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T]
 gi|237625821|gb|ACR02511.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T]
          Length = 265

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 8/214 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++             +  GFD+D  +  +  +      +++ P++   +   L  
Sbjct: 40  KIVIGLDDNFPPMGFRNEKNELVGFDIDLAKEAAKRLG---IAVEFKPIDWSAKEAELNG 96

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K++D L      T  R  ++G  F      + Q  ++     I + ++L+G  I +Q G+
Sbjct: 97  KRVDALWNGLTITEERRKNIG--FTSAYMENHQIIVVPAASAIKTKAELAGKVIGIQDGS 154

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           +    +     A + K     F             R DA   D   +     T  +P+++
Sbjct: 155 SAVDAVQKDPVAASFK-ELKKFGDNVTALMDLTTGRLDAVVLDE--VVGRYYTAKKPNDY 211

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           V+L D            + DT     +      M
Sbjct: 212 VVLDDHFGTEEYGVGTRKDDTALLAKLQKAMDEM 245


>gi|90577483|ref|ZP_01233294.1| putative amino acid ABC transporter [Vibrio angustum S14]
 gi|90440569|gb|EAS65749.1| putative amino acid ABC transporter [Vibrio angustum S14]
          Length = 270

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 82/245 (33%), Gaps = 9/245 (3%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F V I  L +L     + +   S L  IK+RG L+ G++T  V +A     G+  G
Sbjct: 1   MKRFFAVLITALTLLLSASHALAAEKSTLEQIKERGTLRVGLST-FVPWAMRDKQGELIG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+         ++++P        AL + + D++      T  R  +L + F
Sbjct: 60  FEVDVAKRLAKDAGVK---VEFIPTAWDGIIPALLAGKFDVIIGGMSITPQR--NLSVLF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  G      K+     +S        V          A   K +  K     F+ 
Sbjct: 115 TTPYSHSGVQLAASKELAGDKLSIADYNKRSVTLAVRRGAVTAQTAKKYFPKAKLRQFDD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +           A          + L        +   + +S+     AI QGD    
Sbjct: 175 ESQAFQEVLNGNAQAVLASTPKPEQMTLQYKDKL-FLPFKERLSQGSEGFAIRQGDFNLL 233

Query: 239 NIVSW 243
           N  + 
Sbjct: 234 NFFNN 238


>gi|302191508|ref|ZP_07267762.1| amino acid ABC transporter solute-binding component [Lactobacillus
           iners AB-1]
 gi|309804283|ref|ZP_07698360.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 11V1-d]
 gi|309806868|ref|ZP_07700855.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 03V1-b]
 gi|309809497|ref|ZP_07703355.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           SPIN 2503V10-D]
 gi|312872448|ref|ZP_07732517.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 2062A-h1]
 gi|308163686|gb|EFO65956.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 11V1-d]
 gi|308166734|gb|EFO68926.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LactinV 03V1-b]
 gi|308170169|gb|EFO72204.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           SPIN 2503V10-D]
 gi|311092030|gb|EFQ50405.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners
           LEAF 2062A-h1]
          Length = 273

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
                +   ++   +K+   +  G       F  +   +    GF++D  +A++  +   
Sbjct: 21  GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +  +++    K R   L+++ I+ +      T  R+    + F       G   ++   
Sbjct: 81  DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I  V QL+   +    GTT    +             + ++   +  +A +A +  A 
Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T D   L  +    + P  H ++    +  P   A+ +G  E  + ++    A+
Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 245


>gi|259501519|ref|ZP_05744421.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus iners DSM 13335]
 gi|315653362|ref|ZP_07906284.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus iners ATCC 55195]
 gi|259167037|gb|EEW51532.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus iners DSM 13335]
 gi|315489287|gb|EFU78927.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus iners ATCC 55195]
          Length = 277

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
                +   ++   +K+   +  G       F  +   +    GF++D  +A++  +   
Sbjct: 25  GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +  +++    K R   L+++ I+ +      T  R+    + F       G   ++   
Sbjct: 85  DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I  V QL+   +    GTT    +             + ++   +  +A +A +  A 
Sbjct: 143 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 198

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T D   L  +    + P  H ++    +  P   A+ +G  E  + ++    A+
Sbjct: 199 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 249


>gi|116627712|ref|YP_820331.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|116100989|gb|ABJ66135.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
 gi|312278254|gb|ADQ62911.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           ND03]
          Length = 283

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 18/256 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K         ++ L +   ++       +T         K   +K G +   V     
Sbjct: 1   MKKIVKTVLLACLVILPLFALSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G + GFD+D   A+      D   +++  ++   +   L++  ID++      T  R
Sbjct: 61  EKDGSYIGFDIDLANAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169
           +      F      + Q  +  K  GI SV+ ++G ++  QAG++         K     
Sbjct: 118 K--QSADFTEPYMVNEQVLVTKKSSGIDSVAGMAGKTLGAQAGSSGYDAFNASPKILKDV 175

Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + +    +      + R D    D          +    ++ ++P        A
Sbjct: 176 VANQKVVQYSTFTQALIDLNSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235

Query: 228 PAIIQGDTEWYNIVSW 243
               + D      ++ 
Sbjct: 236 VGARKVDKTLIKKINQ 251


>gi|322378094|ref|ZP_08052580.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus sp. M334]
 gi|321280931|gb|EFX57945.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus sp. M334]
          Length = 302

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 38  MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 98  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 152

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 153 DFSTPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 269 KELKEAVDKTIQKLKESGELD 289


>gi|330951203|gb|EGH51463.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7]
          Length = 261

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 11/260 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L+              FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAMVTAEELGITQK 259
            V     A      L    +
Sbjct: 231 RVDEILNAAKADGSLENASQ 250


>gi|297202815|ref|ZP_06920212.1| glutamate binding protein [Streptomyces sviceus ATCC 29083]
 gi|297148212|gb|EFH28894.1| glutamate binding protein [Streptomyces sviceus ATCC 29083]
          Length = 281

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 5/203 (2%)

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              G    + +G + GFDVD    ++  +   P +I+++   + +R  AL    + I++ 
Sbjct: 49  DQPGLGLKEPDGSFSGFDVDVATYVAKQLGYKPDQIEFVETKSADRENALARGDVKIIAA 108

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
                  R+    + F        Q  ++ K   IS  + L+G  +C   G+T+   + D
Sbjct: 109 TYSINDERKK--KVDFAGPYLLAHQDLLVKKDSKISQATDLNGEKLCSVTGSTSAQNVHD 166

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
            F     K     +    E  A  ++   DA T D S L      +    +  +    +S
Sbjct: 167 DFA---PKAQLKQYGGYSECIAGLQSGAVDAVTTDDSILAGFAAQDKYKGQFKLAGLKLS 223

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
                  + +GDT   N V+   
Sbjct: 224 NENYGIGVKKGDTATLNKVNAAL 246


>gi|227894179|ref|ZP_04011984.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus ultunensis DSM 16047]
 gi|227864009|gb|EEJ71430.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus ultunensis DSM 16047]
          Length = 191

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 12/197 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K +  +++    LF T        S        I ++  +  G++   V     K NG
Sbjct: 1   MKKKWIFALISFFALFLTGCESVQQRSNTQDTWNKIARKKQVVIGLDDSFVPMGFEKKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D+D  +A+         ++ +  ++       L++  ID+L      T  R+   
Sbjct: 61  QLTGYDIDLAKAVFKQYG---IRVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERKK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +AF      + Q  ++ K  GI+S +Q+    + +Q G+T E       K  + K   +
Sbjct: 116 KVAFSRPYLRNRQVLVVKKNSGINSFNQMHKYELGMQTGSTAEQWYETKQKVLHAKKT-V 174

Query: 175 VFERVEEIDAAYRAHRC 191
           +++ +        A R 
Sbjct: 175 LYDTISNSFLDLNAGRI 191


>gi|170719627|ref|YP_001747315.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169757630|gb|ACA70946.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 266

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +       S  A  + D  KRG L+ G++   + F      G+  GF+
Sbjct: 1   MMKKYLSRLLVGVTALVAVASAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      +            AL + + D++      T  R  +L L F  
Sbjct: 61  VDILKAMAKSMGVKLETVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K     I S   L+     + +   TT E+                 +
Sbjct: 116 PFIVVGQTLLIRKDLAGEIKSYKDLNNEKYRITSKLGTTGEMVAKKLIAKATYHG----Y 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D                 + L +  +  PLA  + +GD +
Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVDKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 231 SINFINNFLH 240


>gi|169834421|ref|YP_001693634.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168996923|gb|ACA37535.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 268

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|168487060|ref|ZP_02711568.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183570002|gb|EDT90530.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1087-00]
          Length = 268

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSTPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|307710246|ref|ZP_07646689.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus mitis SK564]
 gi|307619008|gb|EFN98141.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus mitis SK564]
          Length = 268

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSIPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|308235037|ref|ZP_07665774.1| extracellular solute-binding protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114714|ref|YP_003985935.1| glutamine ABC transporter binding protein [Gardnerella vaginalis
           ATCC 14019]
 gi|310946208|gb|ADP38912.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Gardnerella vaginalis ATCC 14019]
          Length = 290

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           Y+     I  L  +   S  +  S          ++ GI     G      +G + GFDV
Sbjct: 22  YRAILSMICALCCVLPLSACSKNSRND------VIRIGIKFDQPGLGFK-KSGTYVGFDV 74

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + ++  +     +I +    +K+R   LQ+  +D++      T  R     ++F   
Sbjct: 75  DVAKYVAKKLGYSEDRIVWKESPSKQREAMLQNGDVDMIVATYSITDAR--KNTVSFAGP 132

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +  GQ  ++ K +  +S    L G  +C   G+T+ + + + + +   K   +      
Sbjct: 133 YFIAGQDLLVRKDEHKVSGPDDLDGKRLCSVTGSTSAIVIKEKYSS---KVQLMQQPGYA 189

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A  +   DA T D   L  L   +       ++    ++      I +G+T+    
Sbjct: 190 ECATALFSGIVDAVTTDDIILAGLATASR--GRLKLVSKPFTEEHYGIGIKKGNTKLAKR 247

Query: 241 VSWTHYAMV 249
           ++     M+
Sbjct: 248 INNALKDMI 256


>gi|70728423|ref|YP_258172.1| basic amino acid ABC transporter periplasmic basic amino
           acid-binding protein [Pseudomonas fluorescens Pf-5]
 gi|68342722|gb|AAY90328.1| basic amino acid ABC transporter, periplasmic basic amino
           acid-binding protein [Pseudomonas fluorescens Pf-5]
          Length = 258

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 91/264 (34%), Gaps = 21/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L +L  +S                L+ GI      FA   A G   GFD
Sbjct: 1   MKKLPLISGLALSLLACSSLFAAEKT---------LRLGIEAAYPPFAFKTAEGKIGGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL + +     K +++         +L+ K+ID    +   T  R     + F  
Sbjct: 52  YDIGNALCAQM---QVKCEWIEGEFDGLIPSLKVKKIDAALSSMTITAERRK--SVDFTH 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             YF     +M K   +      L G ++ VQ  TTT+    + F+   +K   + +   
Sbjct: 107 KYYFTSSRLVMKKGAEVDDQYASLKGKTVGVQRSTTTDRYATEVFEPKGIK--VVRYSNN 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI----ISKSPLAPAIIQGDT 235
           EEI     A R DA   D   L          +   + P++            A+ +G++
Sbjct: 165 EEIYMDLAAGRLDAIFADSIPLADFLSMPRGAAYAFVGPELKDPKYVGEGAGIAVRKGNS 224

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
           E    ++     +    E    Q 
Sbjct: 225 ELVGELNKAIEDIRANGEYQKIQA 248


>gi|188533323|ref|YP_001907120.1| histidine-binding periplasmic protein [Erwinia tasmaniensis Et1/99]
 gi|188028365|emb|CAO96226.1| histidine-binding periplasmic protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 87/279 (31%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    S                L+ G +     F    A G   GFD
Sbjct: 1   MKKQVLALSLLMAMTAAGSAFAAGP--------KTLRIGTDPTYAPFEMKNAQGQLTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K  ++  +      +L++K++D +  +   T  R     +AF  
Sbjct: 53  IDLANEICRRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKR--QQEIAFSE 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G +I +  GTT E    + ++   +   P  +   
Sbjct: 108 KLYAANSRLIAPKGSKIEPTLDSLKGKTIGLLQGTTQETYANENWRPKGITVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D  A     L      ++      +    +        + + +
Sbjct: 166 DLVYQDLTAGRIDAAFQDEVAASEGFLKQPAGKDYAFAGPAVKDEKIFGVGTGMGLSKDN 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            +    +          EE+        +++K   + DV
Sbjct: 226 PDLKAAIDKAF------EEMRKDGT-YAKLAKKYFDFDV 257


>gi|186475671|ref|YP_001857141.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184192130|gb|ACC70095.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 304

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 87/235 (37%), Gaps = 7/235 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80
             L  I   G +  G+    + F+    +    G+      A+   I         +++ 
Sbjct: 34  GTLKKIHDDGVITLGVREASIPFSYFNGDRTI-GYSQSIALAIVDDIKKTLAMPDLRVRE 92

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ +  RF+ L + QID+   +T  T  RE      F    +      I  K  GI+  
Sbjct: 93  VPITSANRFMMLANNQIDLECGSTTHTRERESVAA--FSNSFFQYAVRMIARKNAGITDF 150

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  +   AGT+ E  +        +       +   +  AA +A R  A+  D   
Sbjct: 151 PDLAGKPVVTTAGTSDERLVRQLNSEKQLNMRIASAKDHADAFAAVKADRAVAFVMDEPI 210

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           LY  + T+ RP + ++    +     A    +GD  +  +V+     M T+ E  
Sbjct: 211 LYGFRATDPRPDDFIVTGTPLGYETYACMFRKGDAPFRELVNRVISKMQTSGEAE 265


>gi|298501903|ref|YP_003723843.1| amino acid ABC superfamily transporter ATP-binding protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|298237498|gb|ADI68629.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 302

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 38  MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 98  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 152

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 153 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 269 KELKEAVDKTIQKLKESGELD 289


>gi|182683078|ref|YP_001834825.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae CGSP14]
 gi|182628412|gb|ACB89360.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae CGSP14]
          Length = 302

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 38  MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 98  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 152

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 153 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 269 KELKEAVDKTIQKLKESGELD 289


>gi|116516177|ref|YP_815607.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae D39]
 gi|148990572|ref|ZP_01821694.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP6-BS73]
 gi|148994307|ref|ZP_01823571.1| hypothetical protein CGSSp9BS68_07232 [Streptococcus pneumoniae
           SP9-BS68]
 gi|148996519|ref|ZP_01824237.1| hypothetical protein CGSSp11BS70_07485 [Streptococcus pneumoniae
           SP11-BS70]
 gi|149007913|ref|ZP_01831491.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP18-BS74]
 gi|149010974|ref|ZP_01832279.1| hypothetical protein CGSSp19BS75_10978 [Streptococcus pneumoniae
           SP19-BS75]
 gi|149026543|ref|ZP_01836600.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP23-BS72]
 gi|168483584|ref|ZP_02708536.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|168489417|ref|ZP_02713616.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae SP195]
 gi|168577053|ref|ZP_02722882.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae MLV-016]
 gi|194397217|ref|YP_002036822.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae
           G54]
 gi|225860147|ref|YP_002741656.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229081|ref|ZP_06962762.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255704|ref|ZP_06979290.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|303254796|ref|ZP_07340896.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS455]
 gi|303259154|ref|ZP_07345132.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP-BS293]
 gi|303260911|ref|ZP_07346860.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP14-BS292]
 gi|303263238|ref|ZP_07349161.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS397]
 gi|303267650|ref|ZP_07353486.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS457]
 gi|303269996|ref|ZP_07355727.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS458]
 gi|307066785|ref|YP_003875751.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|307126333|ref|YP_003878364.1| amino acid ABC transporter substrate-binding protein [Streptococcus
           pneumoniae 670-6B]
 gi|116076753|gb|ABJ54473.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae D39]
 gi|147757094|gb|EDK64133.1| hypothetical protein CGSSp11BS70_07485 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147760536|gb|EDK67511.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP18-BS74]
 gi|147764610|gb|EDK71540.1| hypothetical protein CGSSp19BS75_10978 [Streptococcus pneumoniae
           SP19-BS75]
 gi|147924189|gb|EDK75290.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP6-BS73]
 gi|147927337|gb|EDK78369.1| hypothetical protein CGSSp9BS68_07232 [Streptococcus pneumoniae
           SP9-BS68]
 gi|147929230|gb|EDK80233.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP23-BS72]
 gi|172042957|gb|EDT51003.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|183572029|gb|EDT92557.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae SP195]
 gi|183577300|gb|EDT97828.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae MLV-016]
 gi|194356884|gb|ACF55332.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae G54]
 gi|225727485|gb|ACO23336.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|301801069|emb|CBW33736.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae INV200]
 gi|302598233|gb|EFL65279.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS455]
 gi|302637748|gb|EFL68234.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP14-BS292]
 gi|302639572|gb|EFL70029.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae SP-BS293]
 gi|302640472|gb|EFL70888.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS458]
 gi|302642819|gb|EFL73130.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS457]
 gi|302647011|gb|EFL77235.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae BS397]
 gi|306408322|gb|ADM83749.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|306483395|gb|ADM90264.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae 670-6B]
 gi|327390520|gb|EGE88860.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA04375]
 gi|332075780|gb|EGI86247.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA17570]
 gi|332077415|gb|EGI87876.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA41301]
          Length = 268

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|15902145|ref|NP_357695.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Streptococcus pneumoniae R6]
 gi|15457638|gb|AAK98905.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae R6]
          Length = 265

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 1   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 61  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 115

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 116 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 172 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 232 KELKEAVDKTIQKLKESGELD 252


>gi|225855891|ref|YP_002737402.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae P1031]
 gi|225857977|ref|YP_002739487.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae 70585]
 gi|237649604|ref|ZP_04523856.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae CCRI 1974]
 gi|237821348|ref|ZP_04597193.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|225720416|gb|ACO16270.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae 70585]
 gi|225725940|gb|ACO21792.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae P1031]
          Length = 268

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSIPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|171743317|ref|ZP_02919124.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC
           27678]
 gi|171278931|gb|EDT46592.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC
           27678]
          Length = 270

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 9/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G ++ GI     G      NG + GFDVD  + ++  +     +I +    +K+R   
Sbjct: 26  ADGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGYSEDQIVWKEAPSKQREAM 84

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150
           LQ+  +D +      T  R+    ++F    +  GQ  ++ K    I     L+G  +C 
Sbjct: 85  LQNGDVDFIVATYSITDERKKV--VSFAGPYFVAGQDLLVRKDETSIKGPEDLNGKRLCS 142

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G+T+ +T+ + F +   +   +      E   A  +   DA T D   L  L      
Sbjct: 143 VTGSTSAVTVKEKFAS---EVQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASAAR- 198

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                ++    ++      I +GDT+    ++     M+ 
Sbjct: 199 -GRLRVVGKPFTQEYYGVGIKKGDTQLATKINNAIADMIQ 237


>gi|323144241|ref|ZP_08078872.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
 gi|322415993|gb|EFY06696.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
          Length = 254

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 82/259 (31%), Gaps = 27/259 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F     C + L     S  A           LK G +     F  V + G   GFD
Sbjct: 8   MKKVF---AACALALSAFCVSAQADT---------LKVGSHPTFAPFEFVDSEGKAIGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++ A   +   ++ + +       AL + QID +      T  R+    + F  
Sbjct: 56  IDLINAIAKA---NGDTVEIVSMPFDGLIPALVTNQIDAIISGMTITDARKE--RVEFTD 110

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y   Q  ++ K        V  L G  IC Q GTT +        A  +    I    
Sbjct: 111 GYYKSIQSVLIRKADAEKFKKVEDLKGQKICTQIGTTGDKF------ARTLSEDVIAMNN 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236
             +     R   C A   D        L +       +  D +  +P     A+ + +  
Sbjct: 165 EPDALMELRNGGCAALINDRPTNLYYLLQSKATEIGELKDDSLYLNPEFYGIAVNKNNKA 224

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++     +  + EL 
Sbjct: 225 LVKRLNAGLEKIAASGELK 243


>gi|307711103|ref|ZP_07647525.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307617065|gb|EFN96243.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 268

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV  L+   +  Q G+  E    D           +
Sbjct: 119 DFSTPYYTSKNKLIVKKSDLATYQSVKDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|89214058|gb|ABD64370.1| amino acid ABC transporter [Pseudomonas chlororaphis]
          Length = 295

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 88/247 (35%), Gaps = 11/247 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRFSALLSALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGXNPEREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                         +  ++++  L G +I V  G   ++ L               FE  
Sbjct: 116 QAYAPFYLAVFGPPEAPVATLDDLKGKTISVTRGAIEDIELTAVAPQ---GVTIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     +   +  SP+   + +   E  +
Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRIPAMKVKLKDSPVYVGVNKNQPELLD 230

Query: 240 IVSWTHY 246
            V+    
Sbjct: 231 KVNQILT 237


>gi|239979493|ref|ZP_04702017.1| putative ABC transporter solute-binding protein [Streptomyces albus
           J1074]
          Length = 312

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 14/230 (6%)

Query: 22  TNASILGDIKKRG----FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
              + L  IK R      L  GI+     +       G  +GFD+D  RA++  +  DP 
Sbjct: 58  AEGATLERIKSRTDKPRKLIVGIDQNSYRWGYRDPATGSLEGFDIDLVRAIAEELMGDPE 117

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            + +  +    R  A+ S ++D++ R    T   +    +AF    +  GQ  ++ K   
Sbjct: 118 AVVFRAIPTNRRVQAIDSGEVDMVVRTMTITC--DRIKEVAFSTAYFETGQQLLVPKGSR 175

Query: 137 IS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           I+   + L G  +C  AG+T    L +  +  +            +     +    DA  
Sbjct: 176 ITGHDTSLKGRKVCAAAGSTA---LTELEREAHGADISTTVPNQLDCLVRLQLGEVDAVV 232

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D +        +       ++ +  ++     A+ +   +    V+   
Sbjct: 233 TDSALAAGQAAQDP---MVELVGEPFTEEFYGVAMHKDAKDLVARVNQVL 279


>gi|116873682|ref|YP_850463.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742560|emb|CAK21684.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 486

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 105/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I  F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHVLQKFAAILLIFIFVFSGFTTVFAADTGDETLKKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV   + ++  +     K+    +N      +L++ ++D++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAKKIAKDL---DVKLDIKEMNFDSLLGSLKTGKVDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  +G  +  Q  TT E    D  K 
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVKKTDKDKFTSVNDFNGIKVGAQKQTTQE----DLAKN 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++  A   +     A    +   +   I  +  SK   
Sbjct: 172 ELIGSDVVSLQKVPDLILNLKSNKMKAVVLEGPVAEAYISQDKTLALADIKFENGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   Q+  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNTSIKDIQDTGLLKKYQEEANKLM 269


>gi|90962416|ref|YP_536332.1| glutamine-binding protein [Lactobacillus salivarius UCC118]
 gi|301299224|ref|ZP_07205511.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821610|gb|ABE00249.1| Glutamine-binding protein [Lactobacillus salivarius UCC118]
 gi|300215039|gb|ADJ79455.1| Glutamine-binding protein [Lactobacillus salivarius CECT 5713]
 gi|300853184|gb|EFK80781.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 276

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 93/254 (36%), Gaps = 18/254 (7%)

Query: 1   MY---KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M    K   +    L+I F  +       A+I    ++   +  G+      F  +    
Sbjct: 1   MKNLRKVTLLFSALLMIFFLGACGKKDKAANIAQRTEQTKTVTWGVKADTRLFGLMNIKT 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  +GFDVD  +AL+  ++   +K++ +   AK +   L+++ ID +      T  R   
Sbjct: 61  GQIEGFDVDMAKALTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAVIAAMTITPERRKI 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKY 171
             + F    +  GQ  ++     I +V  L   G  +    GTT    +  +        
Sbjct: 121 --VEFSQPYFAAGQSLLVPDNSTIKNVHDLDKKGMVVLAVKGTTAVANIHKFAPKAK--- 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F+   +   A ++ +  A + D   L  +    + P  + ++    +  P   A+ 
Sbjct: 176 -VLEFDDYGQAFTALKSGQGQAMSTDNGILAGIAS--ENPG-YQVVGGNFTNEPYGIAVD 231

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    +    
Sbjct: 232 KGQTQMMKRIDKAL 245


>gi|324113638|gb|EGC07613.1| extracellular solute-binding protein 3 [Escherichia fergusonii
           B253]
          Length = 288

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 36  VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 95

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 96  LAKHLGVEA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTVSG 150

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 151 IQALVKKGNEGTIKTANDLKGKKVGVGLGTNYE----EWLRQNVQGVDIRTYDDDPTKYQ 206

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  D  S+     A+ + + +    V+  
Sbjct: 207 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 264

Query: 245 H 245
            
Sbjct: 265 I 265


>gi|306833815|ref|ZP_07466940.1| polar amino acid uptake family ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus bovis ATCC
           700338]
 gi|304424009|gb|EFM27150.1| polar amino acid uptake family ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus bovis ATCC
           700338]
          Length = 273

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 93/281 (33%), Gaps = 18/281 (6%)

Query: 1   MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           M  K  F+ IL L   + L     S+N ++   I K+G L   I+     F     V   
Sbjct: 1   MKIKKIFLGILALISVLTLAACGSSSNENLQEKIVKKGKLVVAISPDYAPFEFKALVDGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G DV+  +A++  +  +   ++   ++      +LQ+ + D+      +T  R   
Sbjct: 61  DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      ++        +SV  LSG  + VQ GT  E    D         
Sbjct: 118 --YDFSDAYYETENAILVKASDADTYTSVDSLSGLKVAVQKGTIEEGLAKDQL----SDS 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +    + E     ++ +  A   +          N   +      +       A A+ 
Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           +   E    V+     +   ++      +  Q++ D  + D
Sbjct: 232 KDSGELVKTVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272


>gi|218548543|ref|YP_002382334.1| cystine transporter subunit [Escherichia fergusonii ATCC 35469]
 gi|218356084|emb|CAQ88701.1| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 266

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTVSG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTANDLKGKKVGVGLGTNYE----EWLRQNVQGVDIRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  D  S+     A+ + + +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|154246016|ref|YP_001416974.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154160101|gb|ABS67317.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 269

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 10/233 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              S +  A  L DI K G ++  +      F  V  +    G+D+D    +++ +    
Sbjct: 25  VALSTAARADTLDDIMKAGVIRIAVPQDFPPFGSVGVDLKPLGYDIDVANLIAAKLGVKA 84

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +    + +  R   LQ+K++D++  +      RE  +   F         G       
Sbjct: 85  ELVP---VTSANRIPYLQTKKVDLVISSLGKNPEREKVM--DFSVAYAPFFNGIFGPADV 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            +  V  ++G ++ V  G+  +L L               +E      +A+ + +     
Sbjct: 140 KVEKVEDIAGMTVGVTRGSVEDLELTKVAP---PTADIKRYEDNNSTISAFLSGQVKVVA 196

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                  A+      P +   +  +I  SP    + + + +    V+    A 
Sbjct: 197 TGNVVAAAILAR--NPPKKPQVKVLIKNSPCYVGLNKDEPKLLEKVNAIITAA 247


>gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4]
 gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4]
          Length = 495

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 89/247 (36%), Gaps = 16/247 (6%)

Query: 5   FFVSILCLIILFFTSFSTN---ASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGFD 60
               +L  + +   + S        L  ++     L+ G +     F    A G   GFD
Sbjct: 14  LLACLLAFLPMSAATASAAEPQGGKLAALRSGQTALRVGTDATFPPFEFTDAKGGQLGFD 73

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RAL+        K+ ++ +       ALQ+ QID+ +     +  R+    + F  
Sbjct: 74  IDLVRALAQRAG--IKKVDFVQMPFGNIVPALQANQIDVGASAIYISPARQK--AVDFSD 129

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I Y  G   F+  K   ++S+  L+G  + VQ GT +   LA +  A       I  +  
Sbjct: 130 IYYPGGLAVFVSDKDNSVASLKDLAGKRVAVQVGTKSVDWLAQHQPAA----QLITAQTN 185

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E++ ++ +  + DA      A                + D +++     A  + D E   
Sbjct: 186 EQMFSSVKLGQADAVVTGAPAGKYFIAQQGG---LKQVGDRLTEENYGYAFQKADPELRT 242

Query: 240 IVSWTHY 246
             +    
Sbjct: 243 AFNAALK 249


>gi|317486431|ref|ZP_07945258.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316922341|gb|EFV43600.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 268

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K F V +L   ++    + + +A    + D+ KRG L+ G +   V +A    NG++ 
Sbjct: 1   MKKFFAVLMLAAALILPGLAQAKDAQTSMIDDVVKRGVLRVGFS-SFVPWAMQDKNGEFV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF++D  + L+  +  +   +Q +P        AL + + D++  +   T  R +     
Sbjct: 60  GFEIDVAKRLAKDLGVE---LQLVPTKWAGIIPALMAGKFDVIIGSMSVTPERNLKANFT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                          K KG+      +   + V   T +        K         +F+
Sbjct: 117 VPYDYATIEVMANKEKTKGMKFPEDFNKPEVVVALRTGSTPV--PVAKKVLPNATFRLFD 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     + R D             L N     +    D   + P+   I +GD + 
Sbjct: 175 DEAPAVQDVLSGRADVMFSSAPLPAFEVLRNPDKL-YQPSTDAFYRQPVGMVIRKGDPDS 233

Query: 238 YNIVSWTHYAMVTAE 252
            N++       V AE
Sbjct: 234 LNVLDNWIR-TVEAE 247


>gi|310640332|ref|YP_003945090.1| cystine abc transporter [Paenibacillus polymyxa SC2]
 gi|309245282|gb|ADO54849.1| Cystine ABC transporter [Paenibacillus polymyxa SC2]
          Length = 285

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 84/270 (31%), Gaps = 28/270 (10%)

Query: 2   YKDFFVS---ILCLIILFFTSFS-----------------TNASILGDIKKRGFLKCGIN 41
            K F V+    L L  L  ++                     A+ L  IKK   +K G+ 
Sbjct: 5   KKGFLVTTLMALALFSLVLSACGTKPEASNTSNGAGSSNEAAANQLEAIKKADVMKVGMM 64

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                +  +  N +  GFDVD  + L+  I        +          +LQ K+ D + 
Sbjct: 65  GTYPPYNFLNDNKELDGFDVDIAKELAKRIGVKAE---FTAQEFSGLIPSLQKKKFDAVV 121

Query: 102 RNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                T  R+    + F      +     +  K   I+++    G +I V  GT  E  L
Sbjct: 122 SQVAITEDRKK--AIDFTDPYITNNVNIIVNSKTNDITTLEDFKGKTIGVGLGTNDESYL 179

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            +        +    ++ V        + R DA   +        + +    +   + + 
Sbjct: 180 RNEVLPKVGDFEIKTYDDVITSLKDLNSGRIDATINN--LYALKPIIDKNGFQIKAVGEP 237

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           I     A AI Q   E    ++     M  
Sbjct: 238 IKSDQAAVAINQKTPELKAALNKALKEMKE 267


>gi|268610257|ref|ZP_06143984.1| extracellular solute-binding protein family 3 [Ruminococcus
           flavefaciens FD-1]
          Length = 292

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 9/226 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +     L +I  +G L  G++           N +  GFD+D  + + + +  +  K  
Sbjct: 51  AAEGDQSLQNILDKGELVLGLDASFPPMGFTDENNEIIGFDIDVAQEVCNRMGVELVK-- 108

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P+N   +   L+  +ID +         R  ++ L        +   F++     + S
Sbjct: 109 -QPINWDTKEEDLKVGKIDCIWNGMSINPARAEAMNL--SDPYMKNEMIFVVPADSEVKS 165

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  L G ++ VQ G+T +  L  + K   +   P+         +       DA   D  
Sbjct: 166 MDDLEGKTVGVQTGSTAQEILEAWDKFDTITESPLE--ENVTALSQMELGFSDAVFLDS- 222

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + A         ++V+L   +     A    + D    + V  T 
Sbjct: 223 -VVANYFITSNNKDYVVLDGNLEAEEYAIGFRKEDQALRDEVQKTL 267


>gi|167587662|ref|ZP_02380050.1| extracellular solute-binding protein family 3 [Burkholderia
           ubonensis Bu]
          Length = 266

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 14/237 (5%)

Query: 17  FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +K+ G L+ G+      F     +G  +GFDVD  +A+++ +    
Sbjct: 19  FTAVAAHAEDLLDSVKQAGVLRIGLEGTYPPFNSRGTSGQLEGFDVDVAKAVAAKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEV--LDFSQPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNY-----DQMARAVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++    ++  
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALTSLKQ 244


>gi|291448799|ref|ZP_06588189.1| glutamate binding periplasmic protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351746|gb|EFE78650.1| glutamate binding periplasmic protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 308

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 10/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++      K+RG L  G         E    +G + GFD++  R +++++  +P  I++ 
Sbjct: 56  DSRTWTKAKRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 115

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQ+ QID          +R+  +G  F    Y  GQG ++      I+  
Sbjct: 116 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDEDDINGP 173

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++C  AG+T    +A  +         + ++           ++ DA T D + 
Sbjct: 174 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 229

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L         P E  ++    S+ P    + + D    N ++    A 
Sbjct: 230 LLGFAAKA--PEEMKVVGKPFSEEPYGIGVPRSDNALRNALNDALEAN 275


>gi|330879084|gb|EGH13233.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 258

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 8/211 (3%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61
                 +   ++    F+      L  IK+ G +  G     + F+ +  A+G   G+  
Sbjct: 50  HLLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 109

Query: 62  DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D    +  AI  D      K++Y  + ++ R   +Q+  +D+   +T   + R     + 
Sbjct: 110 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 167

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   +  K         L G ++   AGTT+E  L        M  + I  +
Sbjct: 168 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 227

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
              E      + R  A+  D + L       
Sbjct: 228 DHGESFQMLESGRAVAFMMDDALLAGEMAKA 258


>gi|298291224|ref|YP_003693163.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296927735|gb|ADH88544.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 270

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 86/262 (32%), Gaps = 16/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +L  ++  F + + +   +  IK+RG L  G+      F     +G   G +
Sbjct: 1   MRRSMIALLLAGVLAPFAAQAADG--VDAIKQRGTLIVGVKADYKPFGFRDPSGAVVGIE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +      +  +   +  R   LQ  ++D+L         R   +     P
Sbjct: 59  PDLAADVAKRLGVKLELVPVV---SSNRIEFLQQGKVDMLIATMSDKPERRKVVQAIDPP 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +  K  G+   S+L G  +C  +G      +A            + F+  E
Sbjct: 116 YYSDFVNVLLPKKA-GVKDWSELKGKPLCATSGAWYNKEIAQ-----KYGVEIVAFDGSE 169

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A +   C  Y  D + +    L  +   ++ +    +  +P   A+  G+      
Sbjct: 170 KPLFALKQGNCVGYVYDQTFVQGKLLDAEWSGDYEMPLKGVLDAPWIMAVALGNDTLQKF 229

Query: 241 VSWTH-----YAMVTAEELGIT 257
           +  T         + AEE    
Sbjct: 230 LEDTTKDWMKTGFIVAEEKKYG 251


>gi|295675491|ref|YP_003604015.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295435334|gb|ADG14504.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 278

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 20/264 (7%)

Query: 5   FFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           F  ++  L+ +             + + S L  + +RG L+ G       F     +G  
Sbjct: 12  FLFAVAGLLAITGCTKVATPEQGAAASPSTLQGVLQRGTLRVGDCLTFAPFGFYNKDGQP 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DVD  + L+  +      +      +  R   LQ+ ++D++  N    L R     +
Sbjct: 72  DGYDVDLAKELAKQMGVKLEVVN---TTSANRIPNLQTSKVDVVFCNFTRNLERAKV--I 126

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F        +  ++ K  GI S+  +SG +I    G+T      D  ++ N+      +
Sbjct: 127 EFTAPYVVASEALLVRKNSGIQSIKDMSGRTIATVKGSTN----GDEVRSLNIPVKIQEY 182

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +    A +  + DA   D + L         P   V    ++     A  +  GD E
Sbjct: 183 DSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPELAVTNEALVPLEYNAFGVKAGDQE 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKN 260
           W N ++   +  V A +L     N
Sbjct: 241 WLNYLNLFLF-NVNASKLNAQLYN 263


>gi|315304435|ref|ZP_07874723.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii
           FSL F6-596]
 gi|313627196|gb|EFR96041.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii
           FSL F6-596]
          Length = 486

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 103/279 (36%), Gaps = 24/279 (8%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K+F   +  + ++F           +       L  I+++G L  G++     +    
Sbjct: 1   MQKNFLQKLAAIALIFIFVFSSFNTVFAADKQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +    +  GFDV   + ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDEIVGFDVSIAKKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K      +SV+  +G  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --IGSDVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFVNGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T   + V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQDKVNASIKEIQDTGLLKDYQKEANKLM 269


>gi|332041198|gb|EGI77563.1| extracellular solute-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 264

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 7/247 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +        ++  F  +         +      L  G +     F    A G+  GFD+
Sbjct: 7   KRSTLKLAALVLAGFAIAGLAACGKKEEAAPAKALVVGTDAAYAPFESQDAQGNIVGFDI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A+++   +   +++++    +  F  L     D+L      T  R+    + F   
Sbjct: 67  DVVKAIAA---NQGLEVKFVNTPWEGIFNTLAQGDRDLLVSAITITAERK--QTMDFSNP 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +   Q   + +K  ++  + +    + VQ GTT +  +           +   FE    
Sbjct: 122 YFDAKQLIAVAEKSTVTKFADIKTLKVGVQTGTTGDDVVQGLLGK--DSANIKRFESTPL 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                 A    A   D   +      N       +  D  +      A+ +G+TE    +
Sbjct: 180 ALKELEAGGVQAVVADNGVVENYVNNNANFKFKTVSDDSFTPEQYGIAVRKGNTELLEKI 239

Query: 242 SWTHYAM 248
           +    A+
Sbjct: 240 NKGLAAI 246


>gi|148558450|ref|YP_001257614.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|148369735|gb|ABQ62607.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
          Length = 257

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L  +  +   +     K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +       LQ+ + D +  +   T  R+  +   F  
Sbjct: 56  LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 111 RYYTPPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228

Query: 239 NIVSWTHY 246
              +    
Sbjct: 229 EQFNAAIK 236


>gi|227818415|ref|YP_002822386.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium
           fredii NGR234]
 gi|227337414|gb|ACP21633.1| putative amino acid ABC transporter, substrate-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 278

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 95/257 (36%), Gaps = 14/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M    + ++   ++    +    A  L DI     ++CG    +  FA    +  +  GF
Sbjct: 1   MKLKSW-TLGAALVATAIAGPAKADKLADITAAKVIRCGTFADVPPFAAPDPSTREMAGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C A++  +          PL+ + R   ++   +DI   N  +TL R   +   F 
Sbjct: 60  DVDLCNAIARELGVKAE---IKPLSVEARVPEVKLGHVDIAVANLAYTLSRAEQIQ--FS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  I+         +  +G  +    G+T+EL +         +  P+ F+  
Sbjct: 115 HPYYLAKEMLIVKADDPGQKKADFAGVRLASTKGSTSELAIR------KNESKPLTFQDT 168

Query: 180 EEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A +  +        ++    +K +  + +E  ++ + +   P+   + + +    
Sbjct: 169 GSAYLAVQQGKARGLVANTMTTTKIVKESKTKGAEMRMIEEPMLFQPIGIGMKKDEPALT 228

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+ T+ E+ 
Sbjct: 229 AKINEILVALDTSGEIN 245


>gi|261210507|ref|ZP_05924800.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
 gi|260840292|gb|EEX66863.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
          Length = 258

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +++G  KGFD
Sbjct: 1   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTESDGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +  +    + +P +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCTEMNVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K   +  +   L G  I VQ  TT +  ++D +         + +   
Sbjct: 107 KYALIPNKFIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 224 KDLTEKLNAAITAL 237


>gi|90412871|ref|ZP_01220871.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum 3TCK]
 gi|90326230|gb|EAS42657.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum 3TCK]
          Length = 258

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 86/251 (34%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +   +   +  +         K+   ++ GI      F+  + +G+ KGFD
Sbjct: 1   MKKWILAAAMVSALGATSLQA---------KEYKEVRFGIEGAYPPFSWTEPSGELKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K + +  +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCKEL---QTKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K   I    + L G  I VQ  TT +  L D +         + +   
Sbjct: 107 KYALIPNKFVAKKGTEIDFTKEGLKGVKIGVQRATTHDKYLTDNY---GDSVTIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           ++     +A R  +  GD SAL    +  +    +  +   ++           A+ + D
Sbjct: 164 DDAYLDLKAGRIASVLGDASALEEGLINKEGGEGYEFIGPSLTDPKWFGEGFGIALRKQD 223

Query: 235 TEWYNIVSWTH 245
            E    +    
Sbjct: 224 KELTKKLDAAI 234


>gi|300780393|ref|ZP_07090249.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium genitalium ATCC 33030]
 gi|300534503|gb|EFK55562.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium genitalium ATCC 33030]
          Length = 339

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 10/218 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI KRG L  G++      +    A G+ +GF+VD  R ++  IF DP K+ +  + +  
Sbjct: 81  DIVKRGRLIVGVDQSQYLLSFRDNATGELRGFEVDLAREIARDIFGDPDKVDFRFVESTM 140

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  ALQS Q+D++ R    T  RE +  + F           ++    GI SV  +    
Sbjct: 141 RTEALQSGQVDVVIRTMSIT--RERAEKVDFSVPYLDSSVRMLVPAASGIESVEDVGDER 198

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV  G+     + D  ++   +   +      +   A +  +     GD + L      
Sbjct: 199 VCVADGS----NVVDMARSTFPEQEVLRTRTWTDCLMAMQQFQAGFILGDETILAGAAAQ 254

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +       +  + +++   A  I +G       V+ T 
Sbjct: 255 DP---LTTVTGEAVAEQQYAIGIPKGYDGLTRQVNSTL 289


>gi|284048019|ref|YP_003398358.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
 gi|283952240|gb|ADB47043.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
          Length = 259

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 73/235 (31%), Gaps = 14/235 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K     +  L  L        +      K++  +K G       F   +  + ++ GF
Sbjct: 1   MKK-ISAVMCVLAALMLAVAGCGSDTKQAAKEQKVIKVGTEPTFAPFEFQEKGSKEFTGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  RA+   +      ++   +       AL S  ID+ +     T  R+    + F 
Sbjct: 60  DMDLARAIGKKLGKK---VEIQNMGFDALIPALNSGNIDVAAAGMSITDERKK--AVTFS 114

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++ K    + S+  L G  I VQ GTT          A         F  
Sbjct: 115 DPYYTSGLVVVVTKDNDGVKSIKDLEGKKIAVQIGTTGADKAGKVPGAK-----VTSFNT 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             E+         DA   D        +   +  +  I+ D +       A  + 
Sbjct: 170 NAEVFLELENKGVDAVIIDKPVAQYYLIKEGKDKD-KIVGDTMDAESYGFAFKKD 223


>gi|293605798|ref|ZP_06688171.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292815793|gb|EFF74901.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 273

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 100/276 (36%), Gaps = 13/276 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M +  + +    +       +  A  + DIK RG L CG       F+    A     G+
Sbjct: 1   MKRHTYFAACLGLATLALGAAAQADQVDDIKARGELICGTLGTSQPFSFQDGATRQLVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+ ++  +      I Y  L+   R   L   ++DIL+ N       + +  +AF 
Sbjct: 61  DVDVCKLVADKLGVK---INYKLLSVAARVPELNEGRVDILAANLG--YSPDRAEQIAFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   Q  ++ K  G+ ++  L+G  I    G+++E  +         K   I +   
Sbjct: 116 HAYYVSPQKLLVRKDSGLDTIEALNGRRIGATKGSSSEREIKRIL----NKSQVIGYGDS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +  + DA       L  L L +   +   ++   +   P    + + +     
Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPRMLQ 231

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
            V+    A+  AE  G      ++    TT   ++R
Sbjct: 232 TVN---QALDEAESSGAAATLFDKWFGPTTPYKLER 264


>gi|163844781|ref|YP_001622436.1| hypothetical protein BSUIS_B0628 [Brucella suis ATCC 23445]
 gi|163675504|gb|ABY39614.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 257

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L  +  +   +     K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +      +LQ+ + D +  +   T  R+  +   F  
Sbjct: 56  LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 110

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228

Query: 239 NIVSWTHY 246
              +    
Sbjct: 229 EQFNAAIK 236


>gi|315612254|ref|ZP_07887168.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
 gi|315315647|gb|EFU63685.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
          Length = 268

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%)

Query: 3   KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           K   +++  L++  L F   +T +  +  IK +G L   +N     F     V       
Sbjct: 5   KKVLITMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A++  +  +   +++ P++      +L S + D+       T  R  S    
Sbjct: 65  GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K       SV  L+   +  Q G+  E    +           + 
Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETL----QDSSLVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +   +    ++ + DA   +          N   +      D   +   A A+ +   
Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V  T   +  + EL 
Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255


>gi|295692447|ref|YP_003601057.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           crispatus ST1]
 gi|295030553|emb|CBL50032.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           crispatus ST1]
          Length = 272

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 87/234 (37%), Gaps = 10/234 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L       ++++   +K+   +  G+      F       G  +GF++D  +AL+  + 
Sbjct: 19  TLTACGQHASSNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +K  ++   A  R   L++  +D +      T  R     + F    +  G   ++ 
Sbjct: 79  GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I +V  L G ++    GTT    +  Y          + ++   +  +A +A++  
Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A T D   L  +    + P  + ++  + S +P   A+ +G  +  + +     
Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243


>gi|307709076|ref|ZP_07645535.1| arginine-binding periplasmic protein 1 [Streptococcus mitis SK564]
 gi|307620022|gb|EFN99139.1| arginine-binding periplasmic protein 1 [Streptococcus mitis SK564]
          Length = 271

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSADLKEVVDKVIQ 248


>gi|94986288|ref|YP_605652.1| extracellular solute-binding protein [Deinococcus geothermalis DSM
           11300]
 gi|94556569|gb|ABF46483.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 272

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L +L     +  A  L  IK  G +  G       F   +      GF+ +   AL+ 
Sbjct: 26  VLLTLLACALGTAAARDLAAIKASGTIYVGTEPTYAPFTYTQGK-KIVGFEAELAEALAK 84

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +      +++ P       + L   + D++  +   T  R+    + F    Y  G   
Sbjct: 85  RMGVK---VEWRPSAFDTLLIGLNQDRFDMVISSHGITPERQK--AVDFAHPHYCSGGVI 139

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +  +   + +V  L G ++ VQ GTT     A   +          +    +      + 
Sbjct: 140 LARENGPL-TVDALQGKTVAVQLGTTY----AQRAQKLPGLSSVKTYPTNADALQMLLSG 194

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R DA+  D     AL+     P   + L  ++ +  +  A+ +G+T   + ++     M+
Sbjct: 195 RVDAFITDR--FVALEARKKFPQAGLKLGQLLFQEKIGIAVKKGNTPLVSAINQALQGML 252

Query: 250 T 250
            
Sbjct: 253 N 253


>gi|239945337|ref|ZP_04697274.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239991794|ref|ZP_04712458.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces roseosporus NRRL 11379]
          Length = 294

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 10/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++      K+RG L  G         E    +G + GFD++  R +++++  +P  I++ 
Sbjct: 42  DSRTWTKAKRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 101

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQ+ QID          +R+  +G  F    Y  GQG ++      I+  
Sbjct: 102 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDEDDINGP 159

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++C  AG+T    +A  +         + ++           ++ DA T D + 
Sbjct: 160 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 215

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L         P E  ++    S+ P    + + D    N ++    A 
Sbjct: 216 LLGFAAKA--PEEMKVVGKPFSEEPYGIGVPRSDNALRNALNDALEAN 261


>gi|253576766|ref|ZP_04854092.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843797|gb|EES71819.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 261

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V  L L +L   S S         K+   L  GI+           N +  GFD
Sbjct: 7   MIMMSLVMALVLTVLAGCSGSGAG------KEDNKLVIGIDDKFAPMGFRDENNEIVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+ +A +  +  +     + P++   +   L S +ID++      T  R+    + F  
Sbjct: 61  IDYAKAAAEKMGMEA---TFQPIDWSAKESELNSGRIDLIWNGYTITEERKG--KVLFTK 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               + Q  +      I+ +S L+G ++ +QA ++      D     +       F    
Sbjct: 116 PYLKNSQVVVTLADSEITQLSDLAGKTVGLQALSSAADA-LDAAPIKSEIKTISEFPDNV 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +  R DA   D   + A            +L + ++       + +G+ E  N 
Sbjct: 175 LALTDLKTKRLDAVVIDE--VVARYYMAKEEGTFKLLDESLAPEEYGIGVKKGNEELLNK 232

Query: 241 VSWTH 245
           +    
Sbjct: 233 LQKAL 237


>gi|258651818|ref|YP_003200974.1| family 1 extracellular solute-binding protein [Nakamurella
           multipartita DSM 44233]
 gi|258555043|gb|ACV77985.1| extracellular solute-binding protein family 3 [Nakamurella
           multipartita DSM 44233]
          Length = 282

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 90/251 (35%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
            +    ++L L ++   + S+ +      S +   ++ G L  GI+    G         
Sbjct: 5   RRGLVGAVLALTLVGLAACSSGSGSVGTPSTVSGAQEGGKLTIGISFDQPGLGFKDGE-T 63

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++GFDVD    +++A+      I ++  +  ER   L+S  +D++  +   T  R+    
Sbjct: 64  YRGFDVDTATYVAAALGVPSQNITWVQADPSEREKLLESGDVDLVFSSYSITDQRK--QV 121

Query: 116 LAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F    +       +   +  I+    L G  +C   GTT+   + D +          
Sbjct: 122 VDFAGPYFVAHQDLLVRRNETDITGPDTLDGRVLCSVTGTTSSQYIKDNYLGR---ITLT 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            + R  +  AA      DA + D   L      +    +  ++ +  +       I +GD
Sbjct: 179 EYPRFSDCVAALANSEVDAVSTDDVILAGFAAQDQYKGKLKLVGNGFTDERYGVGIPKGD 238

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 239 DARVAQVNQAL 249


>gi|126658585|ref|ZP_01729732.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece
           sp. CCY0110]
 gi|126620172|gb|EAZ90894.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece
           sp. CCY0110]
          Length = 260

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 81/245 (33%), Gaps = 12/245 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     ++   I         A+ L DIK+RG L   +   +            +G ++D
Sbjct: 7   KKLVSVLIITAIFNVGDSKLIAATLEDIKQRGKLIVAVKDNIRPLGFRNQENKLQGLEID 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R L+  I  DP  +   P++ +ER   +   ++D+          R     + F P  
Sbjct: 67  LARQLAQDILGDPQAVVLQPVSNQERLQKVIDGEVDLAIARITINTSRGRI--VDFSPYY 124

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y DG G I +    I S   LS   I V   ++T   +             I     +E 
Sbjct: 125 YLDGTGIITNNP-KIRSKYHLSQGKIAVLKRSSTIAVIRTEVPQA----ELIGVSSYQEA 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNI 240
                  + DA+  D S L           ++  LP  +S   L   + +        + 
Sbjct: 180 MTLLETQQVDAFAADNSILTGWVQQYP---QYYQLPVRLSGEGLGVVMPKGLQYASLRSR 236

Query: 241 VSWTH 245
           V+   
Sbjct: 237 VNQAI 241


>gi|134298638|ref|YP_001112134.1| extracellular solute-binding protein [Desulfotomaculum reducens
           MI-1]
 gi|134051338|gb|ABO49309.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 264

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 90/253 (35%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAEVKANG 54
           M + F   +  L IL     +   +   + K       +  L    +     F    ++G
Sbjct: 1   MKRIFKTVLTGLTILALALVAVGCTGKEEAKSPAQDTGKKKLVAAADATFAPFEFTDSSG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D   A++  +  +   +++  +       ALQS QID  +     T  R  S 
Sbjct: 61  KYVGFDLDLIAAIAEEMGYE---LEFQSIAFDGIIPALQSSQIDCAATAMTITPER--SK 115

Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F    Y  GQ  ++      I  V+ L G +I VQ+GTT     A   +    K   
Sbjct: 116 AVNFSDPYYKAGQIVVVKTENNDIKGVNDLKGKTIAVQSGTTG----AMEAEKATDKKKV 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I F   ++     +    +A   D           ++  +  ++ DI+S      A+ + 
Sbjct: 172 IYFTGADQALQELKNGAANAVIIDYPVAAYFIQQGNK--DVKLVGDIMSAEEYGIAVPKD 229

Query: 234 DTEWYNIVSWTHY 246
             +    V+    
Sbjct: 230 KEQILADVNAGLK 242


>gi|295835696|ref|ZP_06822629.1| glutamate-binding protein [Streptomyces sp. SPB74]
 gi|295825636|gb|EDY45043.2| glutamate-binding protein [Streptomyces sp. SPB74]
          Length = 291

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 81/225 (36%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            ++     K RG L  G         E    +G + GFD++  + +++ +    ++I + 
Sbjct: 39  ASATWRKAKARGRLVVGAKEDQPYLGEKDPASGRYTGFDIEIAKMVAAGLGFPANRISFR 98

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  +LQ+ QID           R+  +G  F    Y  GQG +  K   GI   
Sbjct: 99  TIASANRETSLQNGQIDYYVGTYTINDNRKKLVG--FAGPYYLAGQGLLERKDEDGIKGP 156

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L G  +C  AG+T    +   +         + ++           ++ DA T D S 
Sbjct: 157 ADLDGKRVCSAAGSTPYQRIQHDYPKA----DLVSYDTYSICVDNLLTYQVDAVTTDDSI 212

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L         P E  ++    S+ P    + + D      +    
Sbjct: 213 LLGYAAKV--PEELKVVGKPFSEEPYGIGVPREDNALRLAIDGIL 255


>gi|77457194|ref|YP_346699.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas
           fluorescens Pf0-1]
 gi|77381197|gb|ABA72710.1| L-ornithine-binding protein / L-arginine-binding protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 258

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 21/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L L +L  +S                L+ GI      FA     G+  GFD
Sbjct: 1   MKKFPLITGLALSLLACSSAFAAEKT---------LRIGIEAAYPPFASKTDKGEIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL + +     K  ++         +L+ K+ID+   +      R+    + F  
Sbjct: 52  YDIGNALCAQM---QVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKK--SVDFTH 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             YF     +M +   +      L G ++ VQ  TTT+    + F+   +  +   +   
Sbjct: 107 KYYFTSSRLVMKEGASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGI--NVKRYGNN 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI----ISKSPLAPAIIQGDT 235
           EEI     A R DA   D   L              + P++            A+ +G+T
Sbjct: 165 EEIYMDLAAGRLDAIFADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNT 224

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E  + ++     +  + E  
Sbjct: 225 ELVSQLNTAIDGIRASGEYQ 244


>gi|313607306|gb|EFR83728.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL F2-208]
          Length = 486

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV   + ++  +     K++   +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAKKIAKDL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ +A   +     A    +   +   I     SK   
Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVEAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269


>gi|311280249|ref|YP_003942480.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
 gi|308749444|gb|ADO49196.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
          Length = 243

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    +  ++                +  G++     F  + A+    GFD
Sbjct: 1   MKKVILAALLASFAVGASAAE-------------KINFGVSATYPPFESMDASNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +  D     +          +L+ K+ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQMQAD---CTFTNHAFDSLIPSLKFKKYDAVISGMDITPER--SKQVSFTD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    S   L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKGEFKSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P      P +         L  A+   +  
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGTATPKVTDPQYFGTGLGIAVRPDNQA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLAQLNNALKAI 227


>gi|228989528|ref|ZP_04149513.1| Amino acid ABC transporter, solute binding protein [Bacillus
           pseudomycoides DSM 12442]
 gi|228770253|gb|EEM18832.1| Amino acid ABC transporter, solute binding protein [Bacillus
           pseudomycoides DSM 12442]
          Length = 271

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 81/253 (32%), Gaps = 21/253 (8%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K    +   + +       + S   S           +  ++     F   + +G   
Sbjct: 11  MRKKILTAFAAITLCVSFVLGACSKETSTNEG----KEFRYAMSGLYKPFNFKENDGKLV 66

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +   P  +       +     L++K+ D++  +   T   +    + 
Sbjct: 67  GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 121

Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G   F+  K   ISSV  L G  I V   +T +  +               +
Sbjct: 122 FTNPYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKKLVE------KHTDQITEY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +  AI + D E
Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 234 MVKKVNKALEEII 246


>gi|324017956|gb|EGB87175.1| phage integrase, SAM-like domain protein [Escherichia coli MS
           117-3]
          Length = 491

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 239 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 298

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 299 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 353

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 354 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 409

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 410 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 467

Query: 245 H 245
            
Sbjct: 468 I 468


>gi|229587811|ref|YP_002869930.1| cystine transporter subunit [Pseudomonas fluorescens SBW25]
 gi|229359677|emb|CAY46525.1| putative ABC transport system, exported protein [Pseudomonas
           fluorescens SBW25]
          Length = 264

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 76/225 (33%), Gaps = 10/225 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     LG+IKK G +K G+      F+ V  +G   GF+V+   AL+  +      ++ 
Sbjct: 27  AVAGEQLGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFEVELSEALAKELGVK---VKL 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                     AL+SK++D +      +  R+     +            +      I + 
Sbjct: 84  QATPWDGILAALESKRLDAVVNQVTISEERKKKYDFSKPYTVSGIQALVLKKNVDTIKTA 143

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  + V  GT  E  L D    +  K     +          R  R DA   D  A
Sbjct: 144 DDLAGKKVGVGLGTNYEQWLKD----NQPKAIIKTYNDDPTKFQDLRIGRIDAILIDRLA 199

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    +  +     D  S+     A+ +G+ E    V+   
Sbjct: 200 ALEY---AKKAPDTAAAGDAFSRQEAGIALRKGEPELLAAVNQAL 241


>gi|91790186|ref|YP_551138.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91699411|gb|ABE46240.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 303

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 97/256 (37%), Gaps = 7/256 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   VS+   + L   S++  A  L  ++    L  G  +G + F+ +   G   G+ 
Sbjct: 1   MSRR-IVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYA 59

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +D C+ L++AI  +      +I ++P+   ER  AL    ID+   ++  T        +
Sbjct: 60  IDLCKHLAAAIAKEIRQPEMQIVWIPIGPNERNSALMDGLIDLDCGDSTVTAQ--SQKVI 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF    Y  G   ++ K   I+ +  LSG  +     +  E  L        +    +V 
Sbjct: 118 AFSIPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAMLRHVLGQTGVTADVVVA 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              +         +  A   D + L+ ++      ++   LP   S  P A A  + D  
Sbjct: 178 RTAKAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDER 237

Query: 237 WYNIVSWTHYAMVTAE 252
              +V+     ++ + 
Sbjct: 238 LRTLVTREIKTLIASG 253


>gi|307706858|ref|ZP_07643660.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307617731|gb|EFN96896.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 271

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKSDVEKYKDLTSLESANIAAQKGTVPEAMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSADLKEVVDKVIQ 248


>gi|302186816|ref|ZP_07263489.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 261

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 89/261 (34%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L+              FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAMVTAEELGITQKN 260
            V     A      L    + 
Sbjct: 231 KVDEILNAAKADGTLEKASQT 251


>gi|307705070|ref|ZP_07641951.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis SK597]
 gi|307621369|gb|EFO00425.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis SK597]
          Length = 271

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSADLKEVVDKVIQ 248


>gi|296103000|ref|YP_003613146.1| allantoate transport periplasmic binding protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057459|gb|ADF62197.1| allantoate transport periplasmic binding protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 268

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 12/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   +   T+ S  A  L DI+KRG ++  +      F  V  +   +G+D
Sbjct: 9   MKKLLI--ALAGAVCLLTNLSAKADQLQDIEKRGTIRIAVPQDFPPFGSVGTDLQPQGYD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F  
Sbjct: 67  IDMARYLAKQM---KVKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +   + LSG +I V  G   ++ L               +E   
Sbjct: 122 AYAPFFLGVFGPKGAELKDAAALSGKTIGVTRGAVEDMVLTSLAPK---DADVKRYEDNN 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + +          + A+  +     +  +   ++  SP    + + +      
Sbjct: 179 TTLSAYLSGQVQYVATGNLVVAAI--SRQNAEKAPVPSFMLKDSPCFIGLKKNEPALKAK 236

Query: 241 VSWTH 245
           V    
Sbjct: 237 VDALI 241


>gi|4154051|emb|CAA22704.1| putative glutamine-binding protein [Mycobacterium leprae]
          Length = 325

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + +I+ RG L  G+  G   F+      G+  GFD+D    ++  IF  P
Sbjct: 72  FPTKAEADAAVAEIRARGRLIVGLEIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGTP 131

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S ++Y  L+   R  ALQ  ++DI+ +    T  R     + F  +     Q  +  +  
Sbjct: 132 SHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKL--VNFSTVYLDAKQRILAPRDS 189

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+  S LS   +C+  GTT+   +++           +  E   +   A +    DA +
Sbjct: 190 PITKPSDLSNKRVCMTRGTTSLHQVSEVVP----PPIIVSAENWADCLVAMQQREIDAIS 245

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 246 TDDAILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTTLVRFVNGTL 292


>gi|15827074|ref|NP_301337.1| putative glutamine-binding protein [Mycobacterium leprae TN]
 gi|221229552|ref|YP_002502968.1| putative glutamine-binding protein [Mycobacterium leprae Br4923]
 gi|13092622|emb|CAC29811.1| putative glutamine-binding protein [Mycobacterium leprae]
 gi|219932659|emb|CAR70396.1| putative glutamine-binding protein [Mycobacterium leprae Br4923]
          Length = 326

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 10/230 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F + +   + + +I+ RG L  G+  G   F+      G+  GFD+D    ++  IF  P
Sbjct: 73  FPTKAEADAAVAEIRARGRLIVGLEIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGTP 132

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S ++Y  L+   R  ALQ  ++DI+ +    T  R     + F  +     Q  +  +  
Sbjct: 133 SHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKL--VNFSTVYLDAKQRILAPRDS 190

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+  S LS   +C+  GTT+   +++           +  E   +   A +    DA +
Sbjct: 191 PITKPSDLSNKRVCMTRGTTSLHQVSEVVP----PPIIVSAENWADCLVAMQQREIDAIS 246

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D + L  L    + P  H++ P+ ++  P    I   +T     V+ T 
Sbjct: 247 TDDAILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTTLVRFVNGTL 293


>gi|328957172|ref|YP_004374558.1| extracellular solute-binding protein [Carnobacterium sp. 17-4]
 gi|328673496|gb|AEB29542.1| extracellular solute-binding protein [Carnobacterium sp. 17-4]
          Length = 262

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 83/246 (33%), Gaps = 15/246 (6%)

Query: 12  LIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +  L   +    A    +  +         L  G++   V      + G+  G DVD   
Sbjct: 7   MFSLLLVACGNTADTKTEEAEVFLGEPGDTLVVGLDDTFVPMGFRDSEGNLVGLDVDLAT 66

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +      I++ P++   +   L S  ID++      T  R+    + F       
Sbjct: 67  EVAKRL---DLNIEFQPIDWAMKETELTSGNIDVIWNGYSITEERKE--KVDFSIPYTDG 121

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEI 182
           GQ F++     I +   L   ++  Q  ++T   LA +             I +    ++
Sbjct: 122 GQIFVVLADSPIKTWDDLKEKTVAAQQSSSTVDLLASHESGIMDTFANGEIIQYPSYNDV 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                + R +A            +      ++ IL +  ++   A  + + DTE+   ++
Sbjct: 182 FNDLDSKRSEAIAVSE-IYARYTMKQKGLGKYRILDESFAEEETAVGVRKTDTEFLEKLN 240

Query: 243 WTHYAM 248
            T   M
Sbjct: 241 TTLTDM 246


>gi|289167584|ref|YP_003445853.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
 gi|288907151|emb|CBJ21985.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
          Length = 271

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSFLATFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSADLKEVVDKVIQ 248


>gi|55820919|ref|YP_139361.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822839|ref|YP_141280.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus thermophilus CNRZ1066]
 gi|55736904|gb|AAV60546.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738824|gb|AAV62465.1| amino acid (glutamine) ABC transporter, substrate binding protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 283

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 18/256 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K         ++ L +   ++       +T         K   +K G +   V     
Sbjct: 1   MKKIVKTVLLACLVILPLFTLSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G + GFD+D   A+      D   +++  ++   +   L++  ID++      T  R
Sbjct: 61  EKDGSYIGFDIDLANAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169
           +      F      + Q  +  K  GI SV+ ++G ++  QAG++         K     
Sbjct: 118 K--QSADFTEPYMVNEQVLVTKKSSGIDSVAGMAGKTLGAQAGSSGYDAFNASPKILKDV 175

Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + +    +      + R D    D          +    ++ ++P        A
Sbjct: 176 VANQKVVQYSTFTQALIDLNSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235

Query: 228 PAIIQGDTEWYNIVSW 243
               + D      ++ 
Sbjct: 236 VGARKVDKTLIKKINQ 251


>gi|307701932|ref|ZP_07638941.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus mitis NCTC 12261]
 gi|307616747|gb|EFN95935.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus mitis NCTC 12261]
          Length = 271

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKSDVEKYKDLTSLESANIAAQKGTVPEAMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSADLKEVVDKVIQ 248


>gi|58337338|ref|YP_193923.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           acidophilus NCFM]
 gi|58254655|gb|AAV42892.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           acidophilus NCFM]
          Length = 286

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/300 (22%), Positives = 117/300 (39%), Gaps = 43/300 (14%)

Query: 1   MY-KDFF---VSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40
           M  K+ F   +SIL ++++  ++            T+AS         +IK+RG+L+  +
Sbjct: 1   MKVKNIFNWTISILAILLVIISAYFGFAQKGLNSGTSASRWSNQNGVSEIKRRGYLRVAV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
              L  +  V +NG   G+DV     ++  +      I+++ +NA  R   L S + DI+
Sbjct: 61  FGDLPPYGWVNSNGKRVGYDVYLAHRMTQDLGVK---IRFVQVNANNRVDTLNSNKADII 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
             N   T  R+    + F         G I  K   I+S +QL    + V  GTT E   
Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKSAPITSANQLKNKKLIVTKGTTAENYF 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
           +          + + F+   +   A +  R  A   D S LYA       P   V +  I
Sbjct: 176 SQ-----QKNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKQNPKYTVGIKSI 228

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
             K  ++PA+ +G+       +             IT+ N      +  N +++ + G D
Sbjct: 229 GPKQYISPAVKKGNRSLLKWTNK-----------EITKLNKESFFVEDYNKELRPYFGKD 277


>gi|62317515|ref|YP_223368.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269498|ref|YP_418789.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|189022771|ref|YP_001932512.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus S19]
 gi|254691014|ref|ZP_05154268.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 6 str. 870]
 gi|254695679|ref|ZP_05157507.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 3 str. Tulya]
 gi|254698799|ref|ZP_05160627.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254705877|ref|ZP_05167705.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis M163/99/10]
 gi|254711105|ref|ZP_05172916.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis B2/94]
 gi|254720387|ref|ZP_05182198.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. 83/13]
 gi|254732244|ref|ZP_05190822.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 4 str. 292]
 gi|256015408|ref|YP_003105417.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|256029486|ref|ZP_05443100.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis M292/94/1]
 gi|256059175|ref|ZP_05449384.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella neotomae 5K33]
 gi|256157681|ref|ZP_05455599.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M490/95/1]
 gi|256253346|ref|ZP_05458882.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti B1/94]
 gi|256256200|ref|ZP_05461736.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 9 str. C68]
 gi|260167422|ref|ZP_05754233.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|297249558|ref|ZP_06933259.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|306837482|ref|ZP_07470358.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
 gi|306840711|ref|ZP_07473460.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
 gi|62197708|gb|AAX76007.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939772|emb|CAJ12777.1| Solute-binding protein/glutamate receptor:Ionotropic glutamate
           receptor:Bacterial extracellular solute-binding protein,
           family 3 [Brucella melitensis biovar Abortus 2308]
 gi|189021345|gb|ACD74066.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus S19]
 gi|255998068|gb|ACU49755.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|297173427|gb|EFH32791.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|306289284|gb|EFM60528.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
 gi|306407525|gb|EFM63728.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
          Length = 257

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L  +  +   +     K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +       LQ+ + D +  +   T  R+  +   F  
Sbjct: 56  LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228

Query: 239 NIVSWTHY 246
              +    
Sbjct: 229 EQFNAAIK 236


>gi|325272611|ref|ZP_08138970.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand
           binding protein [Pseudomonas sp. TJI-51]
 gi|324102253|gb|EGB99740.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand
           binding protein [Pseudomonas sp. TJI-51]
          Length = 256

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 79/251 (31%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L      +           K    ++ G++     F     +G   GFD
Sbjct: 1   MKKFVLATVFALASTGVLA-----------KDLSVIRFGVDPTFAPFESKNPDGQLVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +     K  ++         AL++K+ D +         R+    + F  
Sbjct: 50  IDLGNAICAEL---KVKCVWVENAFDSIIPALRAKKFDAVLSAMTINDQRKK--NVDFSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K  G + +   L G  + V  GTT E  +   +    +    + +   
Sbjct: 105 RLYNSPNRLIAKKDSGLLPTPESLKGKRVGVAQGTTQETYVKKIWAPKGVIM--VTYPNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           + +     + R DA   D +      L   + +      D +         +A  + + +
Sbjct: 163 DLLYPDLVSGRIDASLTDAAVAELGFLQTPKNTGFAFAGDAVYNQELLGEGIAIGLRKNE 222

Query: 235 TEWYNIVSWTH 245
            +    ++   
Sbjct: 223 PQLMEAINRAL 233


>gi|259502847|ref|ZP_05745749.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus antri DSM 16041]
 gi|259169214|gb|EEW53709.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus antri DSM 16041]
          Length = 282

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 79/234 (33%), Gaps = 9/234 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T+ +        I++R  +  G++   V     + +G   G+DVD  RA+        
Sbjct: 25  SVTTRANTQDTWSRIERRKKVVIGLDDSFVPMGFREKSGKLVGYDVDLARAVFKQYG--- 81

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+ +  ++   +   L++  ID+L         R+    +AF      + Q  +  K  
Sbjct: 82  IKVDFQTIDWSMKETELKNGTIDLLWNGYSMNPSRKK--KVAFSRPYLENRQVLVTKKSS 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCD 192
            I  ++ ++G S+ VQ G+T    L    K    K      ++++   +      A+R  
Sbjct: 140 HIDGLNGMAGKSLGVQNGSTGAAVLDAKPKLLKDKIKNKSAVLYDTFPDAFIDLNANRIQ 199

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTH 245
               D              + + +              + +GD      ++   
Sbjct: 200 GILMDQVYADYYVDHQKDKNAYKVYESKQLPVEYFGVGMRKGDKTLQKKINQGL 253


>gi|320008163|gb|ADW03013.1| extracellular solute-binding protein family 3 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 280

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 12/235 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  GI     G      +G + GFDVD    ++  +  D   I+++   + +R  A++
Sbjct: 38  GKITIGIKIDQPGLGLKTPDGKFAGFDVDIATYVAKELGYDAKNIEFVETKSADRETAIE 97

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
              +  ++        R     + F        Q  ++      I S   L+  ++C   
Sbjct: 98  RGDVKFIAATYSINDER--LQKVDFAGPYLLAHQDVLVRADDNSIKSPEDLNSKNLCSVT 155

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T+   + D       K     +    E          DA T D S L      +    
Sbjct: 156 GSTSAKNVKDKLA---PKAQLQNYGGYSECLTGLENKAVDALTTDDSILAGYAAQDAHKG 212

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNI 261
           +  +    ++       + +GD +    +           +   A E      N 
Sbjct: 213 KFKLAGFKMTNENYGIGLKKGDADLKKKIDAALTKMVSDGSWDKAVEANFGPANY 267


>gi|264680798|ref|YP_003280708.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni CNB-2]
 gi|262211314|gb|ACY35412.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni CNB-2]
          Length = 320

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 24/275 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------------TNASILGDIKKRGFLKCGI 40
           M   +      L+       +                    + +  L   +  G +  G+
Sbjct: 3   MSLKWVGLAAALVCAGSAVAAGKTEVASSNIGSGIDTVVDLSASPTLQRWQAGGTVVLGV 62

Query: 41  NTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
               V  +  + AN  + G+ +D C  +  AI    ++++Y+ L  +     + +   D 
Sbjct: 63  REAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLKYMVLTPQNTMPLINNGTADF 121

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
              +    L R+  +   F   TY       +    GI+S  QL G ++    GTT    
Sbjct: 122 NCASMTNNLTRQKQVA--FGLTTYVSEVRMAVRADSGITSFRQLQGRNVGAITGTTAVQI 179

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L  Y   + + +  ++ +   E      + R DA+  D + L  +   +  P  + I+ +
Sbjct: 180 LRKYASDNELNFKTLMSKDQFESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIVGE 239

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           +I   P+A    + D +    V      M+ + EL
Sbjct: 240 VIGAEPIAIQFSKNDPQIKKAVDGAILQMIRSGEL 274


>gi|256827733|ref|YP_003151692.1| amino acid-binding protein [Cryptobacterium curtum DSM 15641]
 gi|256583876|gb|ACU95010.1| amino acid-binding protein [Cryptobacterium curtum DSM 15641]
          Length = 291

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 94/298 (31%), Gaps = 35/298 (11%)

Query: 1   MYKD---FFVSILCLIILFFTSFS-------------TNASILGDIKKRGFLKCGINTGL 44
           M K     FV+  C++ +   + +               +S   DIK    L  G +   
Sbjct: 5   MKKKGLFAFVASACMVCVLAFALAGCSGGQNSTQNGDAQSSNSADIK---TLTVGFDPAY 61

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             +  V  +G + GFD+D  + + +    +       P++   +   L    I+ +    
Sbjct: 62  PPYGFVGDDGQYTGFDLDLAKEVCNRNGWEFKA---EPIDWDAKDALLGQGAINCIWNGF 118

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                RE      F      + Q  ++     IS +S LSG ++  Q  +     L    
Sbjct: 119 TM-EGREG--QYTFSDPYMLNEQVVVVKSGSNISQLSDLSGKTVMTQVDSAALDVLETPA 175

Query: 165 KAHNM--------KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
                           P       +      A   DA   D+S   A       PS+++ 
Sbjct: 176 AEDGQADLAATFTGGAPQTIGNYNDAFLQLDAGTVDAVACDLSI--AQYQIAANPSKYMQ 233

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           L + +S    A     G++E    V+ T   M     +    +   Q      N +++
Sbjct: 234 LSEALSTENYAVGFKLGNSELAQKVTATLKEMAADGTVKQLCEKYAQYGLSYDNWELK 291


>gi|13324646|gb|AAK18828.1|AF327739_5 Peb1 [Streptococcus thermophilus]
          Length = 277

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 27/285 (9%)

Query: 2   YKDFF-----VSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGF 47
           +K        VS++   +   T+  T A           +  I  RG L  G+   +  F
Sbjct: 3   FKKILRYLTAVSLVIATVFLITNHKTEAEDTSKLLDSKTVQKIVNRGTLNVGVKQDVPNF 62

Query: 48  AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
               A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L      
Sbjct: 63  GYYSAKTNRYEGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R+ S  +      Y D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  A
Sbjct: 120 NDERKASYAI--SNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSA 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           HN+K++ +      E+  +  AHR DA++ D S L   +    +     IL +       
Sbjct: 178 HNLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDY 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269
             A  + + E  +  +           L     + N+     +  
Sbjct: 233 GIASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277


>gi|15900055|ref|NP_344659.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Streptococcus pneumoniae TIGR4]
 gi|111657059|ref|ZP_01407854.1| hypothetical protein SpneT_02001712 [Streptococcus pneumoniae
           TIGR4]
 gi|14971580|gb|AAK74299.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptococcus pneumoniae TIGR4]
          Length = 268

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATKLGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSIPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    V  T   +  + EL 
Sbjct: 235 KKLKEAVDKTIQKLKESGELD 255


>gi|313668015|ref|YP_004048299.1| histidine-binding periplasmic protein [Neisseria lactamica ST-640]
 gi|313005477|emb|CBN86912.1| histidine-binding periplasmic protein [Neisseria lactamica 020-06]
          Length = 268

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    ++ C ++                     + +   N     F  + + G+ +GF
Sbjct: 3   MKKWIAAALACSVLALSACGGQGKDAAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++ A      KI++        F AL +   D++      T   +    + F 
Sbjct: 63  DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K +SS   L     + V  G T + +++      N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGYTGDFSVSKLLG--NDNPKIARFEN 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +GD   
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 VKMLNDALKKVRESGEYD 252


>gi|55821471|ref|YP_139913.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737456|gb|AAV61098.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
          Length = 278

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 18/254 (7%)

Query: 1   MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   + +  +  L    + S++ + L  +K +G L   +N     F          
Sbjct: 3   MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKNKGTLTVALNPHFAPFEFKTIQDGKD 62

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D++  + +   +      +++  ++      ++QS + DI       T  R+   
Sbjct: 63  TIAGADIEIAKVIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 118

Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              F    Y      ++ K    K    +S  S  SI VQ G+  E       KA+    
Sbjct: 119 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLSDA 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +   +  E     ++ + +    + +        N   +   I     S    A A+ 
Sbjct: 174 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 233

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 234 KGSDDLKAKVNKII 247


>gi|167758444|ref|ZP_02430571.1| hypothetical protein CLOSCI_00784 [Clostridium scindens ATCC 35704]
 gi|167664341|gb|EDS08471.1| hypothetical protein CLOSCI_00784 [Clostridium scindens ATCC 35704]
          Length = 283

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 74/217 (34%), Gaps = 7/217 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G +     +     +G++ GFD++  + +     +D   ++  P++   + + + S
Sbjct: 48  TLIVGFDASFPPYGYKDDDGEYVGFDLELAQEVCDR--NDWKLVK-QPIDWDAKDMEIDS 104

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             ID +          +      +      + Q  ++    GI+S   LSG  +  QA +
Sbjct: 105 GTIDCIWNGFTMNGREDE---YTWSDPYIDNKQVIVVATDSGINSFDDLSGKLVETQADS 161

Query: 155 TTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +    L  D  +                      +  CDA   DI   Y    +   P +
Sbjct: 162 SALAALQGDQKELAGTFGSLTEIAEYNTAFMDLESGACDAIAMDIGVAYYQINSRKNPDD 221

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + +L + IS    A     G+ E  + V  T   M  
Sbjct: 222 YKVLDEEISSEQYAVGFKLGNEELRDKVQATLDEMAE 258


>gi|229113500|ref|ZP_04242949.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus Rock1-15]
 gi|229164679|ref|ZP_04292543.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus R309803]
 gi|228618759|gb|EEK75721.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus R309803]
 gi|228669918|gb|EEL25312.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus Rock1-15]
          Length = 262

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 8/218 (3%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   L  GI+           +    GFD+D+ +A +  +    +K+++ P++ K +  
Sbjct: 32  KEDNTLVIGIDDKFAPMGFRDESNKIVGFDIDYAKAAAEKMG---TKVKFQPIDWKTKES 88

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            L S +ID++      T   +    + F      + Q  +      I+ ++ L G  + +
Sbjct: 89  ELSSGRIDLIWNGYTITD--DRKNKVLFTKPYLKNAQVVVTLADSPITKLNNLEGKVVGL 146

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q+ ++    L        +K     F          ++ R DA   D   +         
Sbjct: 147 QSLSSASDALNSNPIKSKIK-TVTEFADNVSALNDLKSGRLDAVIIDEVVINYYMTKEKD 205

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                IL + +S       + +G+      +      M
Sbjct: 206 --TFKILDEFLSPEEYGIGVKKGNDALLKKLQKALDEM 241


>gi|44004546|ref|NP_982215.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|190015020|ref|YP_001966755.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus]
 gi|190015286|ref|YP_001967079.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus]
 gi|218848398|ref|YP_002455141.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|296506619|ref|YP_003667853.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           thuringiensis BMB171]
 gi|42741612|gb|AAS45057.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|116584696|gb|ABK00811.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus]
 gi|116584967|gb|ABK01076.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus]
 gi|218540449|gb|ACK92845.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|296327206|gb|ADH10133.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus
           thuringiensis BMB171]
          Length = 257

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 8/218 (3%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   L  GI+           +    GFD+D+ +A +  +    +K+++ P++ K +  
Sbjct: 27  KEDNTLVIGIDDKFAPMGFRDESNKIVGFDIDYAKAAAEKMG---TKVKFQPIDWKTKES 83

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            L S +ID++      T   +    + F      + Q  +      I+ ++ L G  + +
Sbjct: 84  ELSSGRIDLIWNGYTITD--DRKNKVLFTKPYLKNAQVVVTLADSPITKLNNLEGKVVGL 141

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q+ ++    L        +K     F          ++ R DA   D   +         
Sbjct: 142 QSLSSASDALNSNPIKSKIK-TVTEFADNVSALNDLKSGRLDAVIIDEVVINYYMTKEKD 200

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                IL + +S       + +G+      +      M
Sbjct: 201 --TFKILDEFLSPEEYGIGVKKGNDALLKKLQKALDEM 236


>gi|15896568|ref|NP_349917.1| periplasmic amino acid binding protein [Clostridium acetobutylicum
           ATCC 824]
 gi|15026405|gb|AAK81257.1|AE007829_10 Periplasmic amino acid binding protein [Clostridium acetobutylicum
           ATCC 824]
 gi|325510729|gb|ADZ22365.1| Periplasmic amino acid binding protein [Clostridium acetobutylicum
           EA 2018]
          Length = 269

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 81/260 (31%), Gaps = 23/260 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M +   F  ++L L ++   +         + + + L  IK  G L+ G       F   
Sbjct: 1   MKRKGIFASAVLALTLVIGITGCSSSSSQKTASQNSLEKIKSEGKLRIGTEGTYAPFTFH 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            + G+  GFDVD  + +S  I   P    ++       F  L + + D++          
Sbjct: 61  DSKGNLTGFDVDIAKEVSKRIGVKPE---FVETKWDGMFAGLDAGRFDVVLNEVAI--KP 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +  +   F           I+ K    I S S L G     Q+ T+    +     A N 
Sbjct: 116 DRKVKYDFSTPYITSRAVLIVKKDNNTIKSFSDLKGKKSA-QSLTSNLGNI-----AKNN 169

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I  +   E      ++R DA   D  +   LK          +     +    A  
Sbjct: 170 GAELIQVDGFNEAVDLLTSNRVDATINDSLSYLDLKKQKPDAPIKSVANYNNASESAAMF 229

Query: 230 IIQGDT-EWYNIVSWTHYAM 248
               +  E    V+     M
Sbjct: 230 KKGSNNKELIAAVNKALKDM 249


>gi|170743518|ref|YP_001772173.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168197792|gb|ACA19739.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 305

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA---NGDWKGFDVDFCRAL----SSAIFDDPSK 77
             L      G +  G  T  + F+ V+     G   G+ +D C+ +      AI  D  +
Sbjct: 33  GTLRKAATSGVVAIGYRTSSIPFSFVEEGRGEGRPVGYAIDLCQEIVDEIGRAIGRDDLR 92

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I+++P+ ++ R  AL S +ID+   +T     R     +AF P+T+      ++ +   I
Sbjct: 93  IRFVPVTSESRIPALLSGEIDLECGSTTANAERRR--SVAFSPVTFVSATTLLVPRGSAI 150

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S   L+G  + V AGTT E  L        +    +      E  A  R  R DA+  D
Sbjct: 151 ASYRDLAGKRVVVTAGTTNETALRALLARLRLDAQVLTGRDHAESFALLREGRADAFALD 210

Query: 198 ISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              L  L     +      +LPD +S  P      + D     +V      +    EL 
Sbjct: 211 DVLLSGLIAAAGEAGRGFTVLPDKLSFEPYGIMFRKDDPALAGVVDAAFARLAGTRELR 269


>gi|307316501|ref|ZP_07595944.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306897699|gb|EFN28442.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
          Length = 268

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 82/238 (34%), Gaps = 17/238 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M          L+     +   +A  L DI   G L+C +            N +  GFD
Sbjct: 1   MKTSVL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L+ A+      ++       ER  AL S ++D+   +T  TL R  ++G+    
Sbjct: 59  VDYCNDLARALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +        ++K GI S   + G  +   AGT   + L +  KA         ++   
Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172

Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229
           ++  A    + DA     +             + + +  P +   +    ++      
Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFL 230


>gi|218440217|ref|YP_002378546.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
 gi|218172945|gb|ACK71678.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
          Length = 295

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L     S   ++L  + + G L  G  T +V  A V    +  G+ 
Sbjct: 1   MKKLTLALLSLAFTLALPLKSGAETVLERVARTGVLTVGTPTDIVPLAYVNEQQELVGYS 60

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           VDF   L   I         +Q++ +   +    L S+++DI+  N  ++  R+    + 
Sbjct: 61  VDFLNLLKDQIQTQLGREIALQFVEITPSDGIPKLMSEEVDIIC-NAGFSWERDKF--VD 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F       G   ++ +   + S+  L G  +     T  E  +    +        +  E
Sbjct: 118 FSLSMGISGTQILVKQNTNLGSIDSLKGKRVAAIPKTIAEQVI----RVSQPDATVVTVE 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236
            +++   A    + DA+  D   L   + T  +P+ + ++P+   ++  +A  + + +++
Sbjct: 174 SMQQGFEAVEQGKVDAFAADGIILEGYQQTVSQPNAYKVVPEQPYNRQGIACMVPENNSK 233

Query: 237 WYNIVSWTH 245
           + + +++T 
Sbjct: 234 FLDTINFTI 242


>gi|260893884|ref|YP_003239981.1| extracellular solute-binding protein family 3 [Ammonifex degensii
           KC4]
 gi|260866025|gb|ACX53131.1| extracellular solute-binding protein family 3 [Ammonifex degensii
           KC4]
          Length = 271

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 90/328 (27%), Gaps = 68/328 (20%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56
           M +      + ++ +  +F +    ++S      ++             F       G  
Sbjct: 1   MKRFWSRLCIGLVLVTAIFLSGCGASSSKTTAESQKPKYVVATEASFAPFEFRDDKTGQI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +AL++    D   +++  +       A+++  +D+          R+    +
Sbjct: 61  TGFDIDLMKALAAIQGFD---VEFKDMGFDGIIAAVKTGSVDMAISAISIDEERKK--QV 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    Y  G    +    + I ++  L G  I  Q GTT        F         I 
Sbjct: 116 NFSLPYYQSGLCVAVRADNQNIKTLKDLEGKKIAAQLGTTGAK-----FAKTIPGAKVIE 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    +          DA+  D        +    P   V+    I+      A+ +   
Sbjct: 171 FNTANDAFMELINGGVDAFINDYPVTA-YFIKQGHPEVKVVKDIHINSEFYGIAVPKNRP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           E    ++                                               GL K  
Sbjct: 230 ELLQKINE----------------------------------------------GLKK-- 241

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIP 323
               ++  G Y E++ R  G      +P
Sbjct: 242 ----LKENGQYAEIYRRWFGENPPDFLP 265


>gi|323339492|ref|ZP_08079771.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus ruminis ATCC 25644]
 gi|323093106|gb|EFZ35699.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus ruminis ATCC 25644]
          Length = 270

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 14/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K   + I     L      +N+            IK  G +  G++   V     + N
Sbjct: 1   MKKKSRIGICLFFALCLLGGCSNSKLRAEKVDNWARIKHHGMVVVGLDDSFVPMDFRQKN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G+DVD  +A+       P    +  ++   +   L +  ID++      T  R   
Sbjct: 61  GRLVGYDVDLAQAVFKKCGLKPD---FQTIDWSMKETELMNGTIDVIWNGYSKTSER--M 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-TLADYFKAHNMKYH 172
             +AF      + Q  +  K+K + + + +   +I VQ+G++     +            
Sbjct: 116 KKVAFSNSYLANDQVLVT-KEKNVKNGADMKDKTIGVQSGSSGYDCYVGYPDMLKKYARK 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I ++   +      A R      D      +      P  +  +     K   A  I +
Sbjct: 175 TIQYDTFNDAFLDLDAKRISGIVIDEVYASYVISHKSDPLSYHEVSIGYPKEEFAVGIRK 234

Query: 233 GDTEWYNIVSWTHY 246
           GD +    ++    
Sbjct: 235 GDKKLRLKINRALK 248


>gi|162448162|ref|YP_001621294.1| ABC transporter substrate-binding protein [Acholeplasma laidlawii
           PG-8A]
 gi|161986269|gb|ABX81918.1| ABC-type transport system, substrate-binding component
           [Acholeplasma laidlawii PG-8A]
          Length = 262

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 9/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F +  + L  +  T+ + N       I+++G    G  T       +  NG   GF
Sbjct: 1   MKKLFLLLSIMLTTIVLTACNANNLTDYEYIEQKGSFTLGY-TDFPPMGYLD-NGTPSGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++    +   +  +   +++  ++   + + L SK+ID +      T  R   L + F 
Sbjct: 59  DIEIATLVFERLGIE---LKFKYIDWDAKVVELDSKRIDAIWNGLTITDER--KLEMTFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + +    I  +   I ++S LS  +I ++ G++ +L++       ++      +   
Sbjct: 114 KPYFDNNLIIISKEGSNIDTISDLSDKNIGLELGSSADLSVGKNENILSISKEVKKYSTS 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A  A   DA   D        +  D  + + I  +II           GD     
Sbjct: 174 SDAILALNAGLVDAVIVDE-IYARYVVLKDTTNAYTISSEIIGTEQYGIGFRLGDETLKT 232

Query: 240 IVSWTHYAMVT 250
            +     A+  
Sbjct: 233 KIDEALDALFE 243


>gi|23500376|ref|NP_699816.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|161620691|ref|YP_001594577.1| extracellular solute-binding protein [Brucella canis ATCC 23365]
 gi|23463994|gb|AAN33821.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|161337502|gb|ABX63806.1| extracellular solute-binding protein family 3 [Brucella canis ATCC
           23365]
          Length = 257

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L  +  +   +     K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTVSIQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +      +LQ+ + D +  +   T  R+  +   F  
Sbjct: 56  LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 110

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228

Query: 239 NIVSWTHY 246
              +    
Sbjct: 229 EQFNAAIK 236


>gi|289674517|ref|ZP_06495407.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae FF5]
          Length = 261

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 89/261 (34%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +   +  L   L  +    +A+ L D+  RG LK  +      F  V  +   +G 
Sbjct: 1   MTKRYSALLTALFASLMLSQTPAHANGLDDVVTRGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +  ++ L G +I V  G   ++ L+              FE  
Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + +G  E   
Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230

Query: 240 IVSWTHYAMVTAEELGITQKN 260
            V     A      L    + 
Sbjct: 231 KVDEILNAAKADGSLEKASQT 251


>gi|187922932|ref|YP_001894574.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187714126|gb|ACD15350.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 267

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 11/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + +  ++L   +L   + + +A  L +I K G LK  +      F  V A+   +G+D+
Sbjct: 10  RRAWLAALLLSPVLAVNAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDI 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L+ ++     K++ +P+N+  R   LQ+ ++D++  +   T  RE    + F   
Sbjct: 70  DTAALLAKSM---NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKV--IDFSTA 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                QG        +S  + L+G ++    G   E+ L               FE    
Sbjct: 125 YAPYYQGVFGPADIKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNA 180

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA+ + +            A+      P        +I  SP    + + +      V
Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238

Query: 242 SWTH 245
           +   
Sbjct: 239 NAAI 242


>gi|33596086|ref|NP_883729.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella parapertussis 12822]
 gi|33601482|ref|NP_889042.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella bronchiseptica RB50]
 gi|33573089|emb|CAE36731.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella parapertussis]
 gi|33575918|emb|CAE32997.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella bronchiseptica RB50]
          Length = 262

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 72/241 (29%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + +  L+ L     +  A  L  IK  G +K G       F+   A+    GFDV+  RA
Sbjct: 8   LLLAGLVPLAMVGTAAQADDLAAIKAAGVIKIGTEGTYAPFSYHDASNKLTGFDVEIGRA 67

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +        ++          L  K+ D +      T  R+      F        
Sbjct: 68  IAQKLGVKAE---FVEGKWDGLIAGLDVKRYDAVINQVGITDARKA--KYDFSDPYISSQ 122

Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              I+    + I S + L G        T+    LA  + A       +  +   E    
Sbjct: 123 AALIVREDNQAIKSFADLKGRKSA-NTLTSNFGKLAQSYGA-----EVVPVQGFNEAIDL 176

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWT 244
             + R +A   D  +    K         V   D     S     I + + E    ++  
Sbjct: 177 LMSGRVEATVNDNLSFLDFKKQKPNAKVKVAAYDKSKEFSESGVLIRKNNPELQAAINKA 236

Query: 245 H 245
            
Sbjct: 237 L 237


>gi|258545105|ref|ZP_05705339.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258519624|gb|EEV88483.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 268

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 8/223 (3%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              ++K +G ++ G+ +    F  V ANG  +GFDV+  R L+  +  D +K +++ + A
Sbjct: 22  TPDELKAKGEVRIGVFSDKPPFGYVDANGVSQGFDVEIGRYLTKQLLGDEAKAKFVLVEA 81

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R   L+S ++DI+  N   T  R     + +         G +   K  I S+ +L  
Sbjct: 82  ANRVEYLRSNKVDIILANFTVTPERAKV--VDYAKPYMKVALGVVSPDKAPIKSIDELKD 139

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ +  GTT +      F   +     + +++  E   A    R DA   D + L A  
Sbjct: 140 KTLLLNKGTTADRY----FSKEHRDIKSLKYDQNTETFNALLDGRGDALAHDNTLLLAWA 195

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              + P   V +  I     +APA+ +GD   +  +     AM
Sbjct: 196 --KEHPGYSVGITRIGEDDFIAPAVAKGDDALHAWLDEQIDAM 236


>gi|116627888|ref|YP_820507.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|116101165|gb|ABJ66311.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
          Length = 277

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/284 (19%), Positives = 106/284 (37%), Gaps = 26/284 (9%)

Query: 2   YKDF-----FVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFA 48
            K          ++  + L     +             +  I  RG L  G+   +  F 
Sbjct: 4   KKILRYLTAVSLVIATVFLITIHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L       
Sbjct: 64  YYSAKTNRYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTIN 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+ S  +      Y D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  AH
Sbjct: 121 DERKASYAI--SNPYYHDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAH 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           N+K++ +      E+  +  AHR DA++ D S L   +    +     IL +        
Sbjct: 179 NLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDYG 233

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269
            A  + + E  +  +           L     + N+     +  
Sbjct: 234 IASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277


>gi|256847976|ref|ZP_05553420.1| glutamine ABC transporter substrate binding component
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715036|gb|EEU30013.1| glutamine ABC transporter substrate binding component
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 281

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 9/239 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + +      I++R  +  G++   V     + NG   G+DVD  RA+            +
Sbjct: 30  ANHQDTWSRIERRHKVIIGVDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYGIKAD---F 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             ++   +   L++  ID+L      T  R+    +AF  +   + Q  +  K   I++ 
Sbjct: 87  QTIDWSMKETELKNGTIDLLWNGYSVTPQRQK--KVAFSRVYLLNKQILVTKKSDHINNF 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKY---HPIVFERVEEIDAAYRAHRCDAYTGD 197
            +++G ++ VQ G+T    L +Y +    +     P++++          A+R      D
Sbjct: 145 QEMTGKTLGVQNGSTGMTMLDEYPRLLKDRIKDHKPVLYDTFPNAFIDLNANRIQGILMD 204

Query: 198 ISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                         + +       +     A  + +GD      V+     +    EL 
Sbjct: 205 EVYADYYIQHQPDRNAYATYSSSKMPADKFAVGMRKGDRTLRQKVNQGLGRLQKNGELR 263


>gi|68160898|gb|AAY86895.1| lr1665 [Lactobacillus reuteri]
          Length = 283

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +        I++R  +  G++   V     + NG   G+DVD  RA+         K+ +
Sbjct: 30  ADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P++   +   L++  ID+L         R     +AF      + Q  +  KK  I ++
Sbjct: 87  QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197
           + ++G ++ VQ G+T    L +  K    K     P++++          A+R      D
Sbjct: 145 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQGILMD 204

Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                         + +   +   +     A  + +GD      ++     +    EL 
Sbjct: 205 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 263


>gi|322372851|ref|ZP_08047387.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C150]
 gi|321277893|gb|EFX54962.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C150]
          Length = 277

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 25/259 (9%)

Query: 2   YKDFF----VSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGF 47
           +K       V+ L +  +F  S             N+  +  I KRG L  G+   +  F
Sbjct: 3   FKKILRYLTVATLAIATVFLISSHKTVAEDKSKLLNSKAVQKIVKRGTLNVGVKQDVPNF 62

Query: 48  AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
               A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L      
Sbjct: 63  GYYSAKTNTYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R+ S  +      Y+D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  A
Sbjct: 120 NDERKASYAI--SSPYYYDQIGFLVLKDSGINKISDLNGKTIGVSQGASTKAALQEYASA 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           HN+K++ +      E+  +  AHR +A++ D S L   +    +      L +       
Sbjct: 178 HNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTK-----TLKEGFKTQEY 232

Query: 227 APAIIQGDTEWYNIVSWTH 245
             A  + + +  +  +   
Sbjct: 233 GIASSKSNQDLIDYTNDLL 251


>gi|24379270|ref|NP_721225.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus mutans UA159]
 gi|24377187|gb|AAN58531.1|AE014922_6 putative amino acid transporter, amino acid-binding protein
           [Streptococcus mutans UA159]
          Length = 271

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 16/261 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
            K     I  L+++   + S+++    L  IK +G +   +N     F     V      
Sbjct: 5   KKILLGIIAALMLVTLAACSSSSKDDSLQKIKNKGKIVVAMNPEFAPFEFKTLVNGKDTI 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DV+  +A++  +      +++  ++      ++QS + DI       T  R+     
Sbjct: 65  VGADVEIAKAIAKELGVK---VEFSAMSFNNVLSSVQSGKADIGISGISATKERQKV--Y 119

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K +       + L G S+  Q GT  E    +           +
Sbjct: 120 DFSDTYYESVNVVIVKKSELAKYKKTNSLKGLSVATQKGTIQETVAKEQL----TGAKIV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +  E+    ++ + +    +          ND  +   I     S    A A+ +G 
Sbjct: 176 SLVQNGEMINELKSGQVNGVVLEKPIAEGYVAKNDDLAIAQIKLKSSSSDAYAVAMPKGS 235

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
           +     V      +  A ++ 
Sbjct: 236 SALKKKVDKVIKKLKKANKID 256


>gi|110347317|ref|YP_666134.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110287493|gb|ABG65551.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 289

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 108/279 (38%), Gaps = 16/279 (5%)

Query: 1   MY-KDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M  K  + ++L       +   +  A  L DIK RG L CG+      F      N    
Sbjct: 12  MKGKSLYAALLVAATPGMWGLSAAEAGTLDDIKARGELICGVLGNSEPFGYEDPGNRQVV 71

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+++D C+ L+              +  + R   LQ  ++D+L+    +T  R     + 
Sbjct: 72  GYEIDLCKDLA---GTMDVTPTIKVIAPQARIPELQQGRVDLLAALISYTNERAE--QVD 126

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F      D    ++ K  GI+ +  L+   I VQ G   E  L   F         + ++
Sbjct: 127 FSNTYLVDSFRCMVKKDSGITGLDGLADKRISVQKGGLIEAALRSQFP----NATVLSYD 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
            V E   A++  +  A     + L AL++     +   ILP+ ++       A+ +GD +
Sbjct: 183 DVSERFVAFQQGKAAATCDRATLLRALQIRAKNEATTTILPEALNMMQKAGFAVRKGDKD 242

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
           + + ++       T E  G  Q   ++    ++N D+ R
Sbjct: 243 FVDYLNQFL---ATYESSGKGQALFDRWVGASSNYDLSR 278


>gi|113866797|ref|YP_725286.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113525573|emb|CAJ91918.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 303

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 7/224 (3%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYL 81
            L  IK  G +  G     + F+      +  G+  +    +   +  +      +++  
Sbjct: 34  TLKKIKDSGVISLGYRESSIPFSYTDGK-EVMGYSHEILLQIVDKVKSELKMPGLQMRLT 92

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+ ++ R   +Q+  IDI   +T   L R+  +   F    +  G   +  K  G+   +
Sbjct: 93  PITSQNRIPLVQNGTIDIECGSTTNNLERQKQVA--FSNSMFVYGIKMLTRKDSGVKEFT 150

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L   ++   AGTT E  L        M  + I  +   +        R  A+  D   L
Sbjct: 151 DLKDRNVVTTAGTTGERLLVKMNGEKAMNMNLISTKDHGQSFLILETGRAAAFVMDEPLL 210

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           Y  +      ++ V++   +     A    + D  +  +     
Sbjct: 211 YGERTKAKSAADWVVVGAPLQTENYACMFRKDDPSFKKLADGVI 254


>gi|322516341|ref|ZP_08069267.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
 gi|322125179|gb|EFX96568.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
          Length = 265

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 75/261 (28%), Gaps = 15/261 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K  F ++ L           +       IK++  +     +    F     V      
Sbjct: 1   MKKFWFILTALVATCFLVACSGSQGVSPKTIKEKKKIVVATESEFAPFEFKSLVNGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+   +  +   +++  ++      ++QS + DI       T  R+     
Sbjct: 61  VGADIELAKAIGKKLGVE---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +S   L+  ++  Q G+  E                +
Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDYTSTDSLAKQTVGTQKGSVQETVAKKQISKA----SVV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    ++ +  A   + +        ND  +              A A  +G 
Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLANFNLKSDGSDAYAVATRKGS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    ++        + +  
Sbjct: 232 DDLLKEINAVIKETKDSGQFD 252


>gi|220908696|ref|YP_002484007.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219865307|gb|ACL45646.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 259

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 86/225 (38%), Gaps = 10/225 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +   ++L + S    A+ L  I +RG L   +   L         G  +G ++D  R L+
Sbjct: 4   MSVFLLLAWLSLPAQAAELKQILQRGRLIVAVKDNLPPLGFRDQGGQLQGLEIDIARQLA 63

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +F   + +++ P+   +R  A+ + Q D+   N   T  R     + F P  YF G G
Sbjct: 64  KELFGTETAVEFKPVANVDRLEAVLTGQADLAIANLTATAGRYRL--VNFTPPYYFTGTG 121

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  K K +  ++ L+   + V  G++    L             +     +E       
Sbjct: 122 ILT-KGKSLQRLTDLNHRPVAVLQGSSAIAQLRFLLP----NVKLVGVNSYQEAKTKLDR 176

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               A   D + L   + T      + + P ++S  PLA A  +G
Sbjct: 177 GEVGAVAADSTVLTGWRQTATN---YYLFPTLLSADPLAIAFPKG 218


>gi|86360898|ref|YP_472785.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86285000|gb|ABC94058.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 279

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 4/239 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T    + S L ++  RG L  G  +    +    A+   +GFDVD    ++ A+F DP K
Sbjct: 20  TPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHIVAKALFGDPDK 79

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I+Y+  ++  R   + + ++DI  +    T  R  +  +AF    Y +G G ++      
Sbjct: 80  IEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREGVGLMLKGDGKY 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +  + L  A   V       +       A   +     +E V+ I  A  + R DA   D
Sbjct: 138 ADYAALKAAGSSVTISVLQNVYAESMVHAALPEATVDQYESVDLIYQALESGRADAAATD 197

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
            S+L         P  +       +    A A+ +GD +W N V+   +  +T  E   
Sbjct: 198 QSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFDF 254


>gi|312278469|gb|ADQ63126.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           ND03]
          Length = 277

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 101/258 (39%), Gaps = 24/258 (9%)

Query: 2   YKDF-----FVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFA 48
            K          ++  + L     +             +  I  RG L  G+   +  F 
Sbjct: 4   KKILRYLTAVSLVIATVFLITIHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L       
Sbjct: 64  YYSAKTNRYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTIN 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+ S  +      Y D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  AH
Sbjct: 121 DERKASYAI--SNPYYHDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAH 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           N+K++ +      E+  +  AHR DA++ D S L   +    +     IL +        
Sbjct: 179 NLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDYG 233

Query: 228 PAIIQGDTEWYNIVSWTH 245
            A  + + E  +  +   
Sbjct: 234 IASSKSNQELIDYTNDLI 251


>gi|331267208|ref|YP_004326838.1| ABC transporter substrate-binding protein [Streptococcus oralis
           Uo5]
 gi|326683880|emb|CBZ01498.1| ABC transporter substrate-binding protein [Streptococcus oralis
           Uo5]
          Length = 268

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 88/260 (33%), Gaps = 16/260 (6%)

Query: 3   KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           K   +++  L++  L F   +T +  +  IK +G L   +N     F     V       
Sbjct: 5   KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A++  +  +   +++ P++      +L S + D+       T  R  S    
Sbjct: 65  GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K       SV  L+   +  Q G+  E    +  +A       + 
Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETLQA----SSLVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +   +    ++ + DA   +          N   +      D   +   A A+ +   
Sbjct: 176 LPKNGNLIIDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V  T   +  + EL 
Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255


>gi|293392696|ref|ZP_06637015.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
 gi|291424813|gb|EFE98023.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
          Length = 263

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  +V+ L  I+L   + +  A  L DI++RG L+  +      F  V  +   +G+D+
Sbjct: 3   IKRIWVTALGAIVLMAQAGAVQADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    +AF   
Sbjct: 63  DMAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNPQREK--AIAFSRA 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    + + +   + L G +I V  G   ++ L+D             +E    
Sbjct: 118 YAPFFLGVFGPQAEALKDPAALDGKTIGVTRGAVEDMVLSDSAPK---GAQIKRYEDNNT 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + +          L    +    P++  +   ++  SP    +  G+      V
Sbjct: 175 TLSAYLSGQVQFVATGN--LVVSAIARQNPAKAPVAKFMLKDSPCYVGLRLGEPALKAKV 232

Query: 242 SWTH 245
               
Sbjct: 233 DALI 236


>gi|283457668|ref|YP_003362253.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Rothia mucilaginosa DY-18]
 gi|283133668|dbj|BAI64433.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Rothia mucilaginosa DY-18]
          Length = 276

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 79/217 (36%), Gaps = 8/217 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ GI     G      +  + GFDVD  R ++  +     +I+++   +  R   L +
Sbjct: 34  KIRIGIKFDQPGLGYQDGS-QYTGFDVDVARYIAGKLGYSEDQIEFVESPSANRENMLNN 92

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            Q+D++      +  R+ +  + F    Y  GQ  ++      I     L+G ++C   G
Sbjct: 93  GQVDMIFATYSISDSRKKT--VDFAGPYYTAGQDLLVRADNTDIHGPDDLNGKNLCSVTG 150

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   + D F  +    + +      +   A      DA T D   L  L  T     +
Sbjct: 151 STSAQKVQDKFAKN---VNLVKQNSYSDCVVALNGGVVDAVTTDDIILAGLAATKANKGK 207

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             ++    +       + +G  +    V+     MV 
Sbjct: 208 LKVVGAPFTTERYGVGLPKGTDKC-EAVNKAINEMVA 243


>gi|219670748|ref|YP_002461183.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
 gi|219541008|gb|ACL22747.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
          Length = 269

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 24/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------------GFLKCGINTGLVGFA 48
           M K     I+ ++++   + +                          LK G       F 
Sbjct: 1   MKKSLRNGIIAVVMMGLLALTGCGGNQSQPPANDGANNGANGGEEKVLKIGSAIEYAPFE 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFD+D    ++  +       ++   +      A+   + D +      T 
Sbjct: 61  FMDEKQTPTGFDIDLMNEIAKDLGYTA---KFESSSFDGLVAAIGLGKYDAVISAMTITD 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R     + F    +   Q   + K   I S   L G  + VQ GTT +  + D      
Sbjct: 118 DRAK--SVLFSDPYFESAQIIAVKKGSAIKSEQDLKGKKVGVQQGTTGQFAVED------ 169

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           +   P  F+ + +          +A   D   LY     N    +  I+P    K     
Sbjct: 170 LGIDPRKFDTIGDAINDMMIGGSEAVVADTPTLYYFITQNPN-MDIEIIPSAFEKEYFGI 228

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A    + E  + V+ T  
Sbjct: 229 AFKLDNKELADQVNATLK 246


>gi|319785561|ref|YP_004145037.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317171449|gb|ADV14987.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 257

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 88/249 (35%), Gaps = 15/249 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + +S     +L   + S +      ++    +K G       F  + A+G  +GFD+D 
Sbjct: 5   KWVISATGAAMLATLAGSLS------VQAAEKIKIGTEGAYPPFNTITADGKVEGFDIDI 58

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             AL + +  +    + +  +      ALQ+K+ D +  +   T  R+  +   F    Y
Sbjct: 59  ANALCAQMKVE---CEIVTQDWDGIIPALQAKKFDAIIASMSITEERKKQVA--FTNKYY 113

Query: 124 FDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 +  K   ++S   + L+G ++  QA TT      + +     +     +   EE
Sbjct: 114 TTPLALVAPKDTDLTSTEPAALAGKTVGAQASTTQADYAQNEYGKAGAEAKL--YPTQEE 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R DA   D   L             ++     +++    A+   DT   + +
Sbjct: 172 AITDLTNGRLDAVISDKFVLMDWLKKASDGCCKLVGDVKGTETQAGIAVRLDDTALRDKL 231

Query: 242 SWTHYAMVT 250
           +    A+V 
Sbjct: 232 NAAIDAIVA 240


>gi|300908216|ref|ZP_07125682.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
 gi|300894643|gb|EFK87999.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
          Length = 289

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +        I++R  +  G++   V     + NG   G+DVD  RA+         K+ +
Sbjct: 36  ADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 92

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P++   +   L++  ID+L         R     +AF      + Q  +  KK  I ++
Sbjct: 93  QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 150

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197
           + ++G ++ VQ G+T    L +  K    K     P++++          A+R      D
Sbjct: 151 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQGILMD 210

Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                         + +   +   +     A  + +GD      ++     +    EL 
Sbjct: 211 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 269


>gi|270291924|ref|ZP_06198139.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. M143]
 gi|270279452|gb|EFA25294.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. M143]
          Length = 268

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%)

Query: 3   KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           K   +++  L++  L F   +T +  +  IK +G L   +N     F     V       
Sbjct: 5   KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A++  +  +   +++ P++      +L S + D+       T  R  S    
Sbjct: 65  GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K       SV  L+   +  Q G+  E    +           + 
Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVQDLAQKKVGAQKGSIQETLAKETL----QDSSLVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +   +    ++ + DA   +          N   +      D   +   A A+ +   
Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V  T   +  + EL 
Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255


>gi|16264001|ref|NP_436793.1| putative ABC transporter periplasmic amino acid-binding protein
           [Sinorhizobium meliloti 1021]
 gi|307300146|ref|ZP_07579931.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|15140125|emb|CAC48653.1| putative ABC transporter periplasmic amino acid-binding protein
           [Sinorhizobium meliloti 1021]
 gi|306905035|gb|EFN35618.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 268

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 83/238 (34%), Gaps = 17/238 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M          L+     +   +A  L DI   G L+C +            N +  GFD
Sbjct: 1   MKTSVL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L++A+      ++       ER  AL S ++D+   +T  TL R  ++G+    
Sbjct: 59  VDYCNDLATALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +        ++K GI S   + G  +   AGT   + L +  KA         ++   
Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172

Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229
           ++  A    + DA     +             + + +  P +   +    ++      
Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFL 230


>gi|260461902|ref|ZP_05810147.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259032149|gb|EEW33415.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 243

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 20/244 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L +     ++ +              LK G       F  + ++G   GFD+D   AL 
Sbjct: 1   MLAMAAGSLSAQAAE-----------KLKIGTEGAYPPFNTITSDGKVVGFDIDIANALC 49

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           + +  +    + +  +      ALQ+K+ D +  +   T  R+  +   F    Y     
Sbjct: 50  AQMKVE---CEIVTQDWDGIIPALQAKKFDAIIASMSITEERKKQVA--FTNKYYTTPLA 104

Query: 129 FIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            +  K   I+S   + L+G ++  QA TT      D +     +     +   EE     
Sbjct: 105 LVALKDSDIASTEPAALAGKTVGAQASTTQATYDQDVYGKAGAEAKL--YPTQEEAITDL 162

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +  R DA   D   L             ++     +++    A+   DT   + ++    
Sbjct: 163 QNGRLDAVISDKFVLMDWMKKASDGCCKLVGDVKGTETQAGIAVRLEDTALRDKLNAAID 222

Query: 247 AMVT 250
           A+V 
Sbjct: 223 AIVA 226


>gi|327438812|dbj|BAK15177.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Solibacillus silvestris
           StLB046]
          Length = 264

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 78/249 (31%), Gaps = 12/249 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56
            K     +L  + +   +  T           G      L  G       F  +   G+ 
Sbjct: 5   KKFLITMLLMALTIILAACGTADDETSGSATTGEGGGKKLLVGTEATFAPFESMNDKGEI 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DVD   A+   I    S+I++  +  +  F  + + ++D+ +     T  R+ +   
Sbjct: 65  VGIDVDIMNAIGEEIG---SEIEFRNVGWEPVFQQITNGELDLGASGITITDERKET--Y 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y      ++ +   I ++ +L    I VQ  TT    +A            + +
Sbjct: 120 DFTDPYYEASLMIVVKEDSPIKTLDELKDQKISVQINTTGH--IAAQNLQGKSSSKILAY 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E               A  GD + +      N       I  D   K      + +G+TE
Sbjct: 178 ENQPVAFQEVINGATAAAFGDNAVVIEYLKNNPDSGLKAIESDQFEKEYYGFMVKKGNTE 237

Query: 237 WYNIVSWTH 245
             N ++   
Sbjct: 238 LLNRLNEGL 246


>gi|30022234|ref|NP_833865.1| arginine-binding protein [Bacillus cereus ATCC 14579]
 gi|229129434|ref|ZP_04258405.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-Cer4]
 gi|29897791|gb|AAP11066.1| Arginine-binding protein [Bacillus cereus ATCC 14579]
 gi|228654039|gb|EEL09906.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-Cer4]
          Length = 259

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++IL   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILILSMFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|83747889|ref|ZP_00944921.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum
           UW551]
 gi|207739279|ref|YP_002257672.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
 gi|83725422|gb|EAP72568.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum
           UW551]
 gi|206592652|emb|CAQ59558.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
          Length = 280

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67
           +  L  L   SF   A    +I+K   L+CG    +  FA       +  GFDVD C AL
Sbjct: 10  LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDQKTREMVGFDVDMCNAL 69

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +       +  PL+ + R   ++  ++D+   N  +TL R   +   F    Y   +
Sbjct: 70  AKRMGVTA---KITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              +       S +   G  +    G+T+EL++            P+ F+       A +
Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178

Query: 188 AHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +      +   +  L   +     E  ++ + +   P+   + +G+ +    V+    
Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTSGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238

Query: 247 AMVTAEELG 255
           AM  A E+ 
Sbjct: 239 AMDKAGEIN 247


>gi|325978175|ref|YP_004287891.1| amino acid ABC transporter extracellular amino acid-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178103|emb|CBZ48147.1| amino acid ABC transporter, extracellular amino acid-binding
           protein [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 280

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 74/258 (28%), Gaps = 17/258 (6%)

Query: 1   MY-KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M  K   V  L L+     +         +T+        K G +  G +   V      
Sbjct: 1   MKFKKVLVGALALVSTLTLAACSSLSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFD+D   A+          +++  +N   +   L +  ID++      T  R 
Sbjct: 61  EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDERA 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168
               + F      + Q  +  K  GI+S + +    +  Q+G++         +  K   
Sbjct: 118 E--KVLFTNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIV 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  +E   +     +  R D    D                + I+         A 
Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235

Query: 229 AIIQGDTEWYNIVSWTHY 246
              + D      ++    
Sbjct: 236 GARKADKTLVKKINQAFK 253


>gi|167766045|ref|ZP_02438098.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1]
 gi|317498084|ref|ZP_07956387.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712125|gb|EDS22704.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1]
 gi|291560003|emb|CBL38803.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2]
 gi|316894672|gb|EFV16851.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 261

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 87/252 (34%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V++  ++         +      +     L  G N     F  +       GFD
Sbjct: 1   MKKFLTVALAGVLAASMLFTGCSKKEESKVPD--KLIVGTNAEFPPFEYMNDKKQPDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   + +   +      ++   +  K    A++S  I+ +      T  R+    + F  
Sbjct: 59  IAMIKEIGKRMDKK---VEIQNMEFKSLIGAMESNSINTIIAGMTKTKERQK--SVDFSD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNM---KYHPIVF 176
             Y   Q  I+ K   I  +SQL G  + VQ GTT ++  + + F   N    K     +
Sbjct: 114 SYYTSNQAIILKKDSKIKKLSQLEGKKVGVQEGTTGDIIASGEKFGEKNKVIVKTDVKRY 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  +     +    DA   D     A +   +   +  ++ D         AI +G+T 
Sbjct: 174 KKGVDAVMDLKNGAIDAVVIDE--KPAQEFVKNNAKKLKLVVDSAGAEYYCIAITKGNTA 231

Query: 237 WYNIVSWTHYAM 248
           +   ++    A+
Sbjct: 232 YKEEINKQIKAI 243


>gi|170691131|ref|ZP_02882297.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170144380|gb|EDT12542.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 277

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 89/249 (35%), Gaps = 17/249 (6%)

Query: 4   DFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
             F     L ++  T        +   S L  + +RG L+ G       F     +G   
Sbjct: 12  SLFAVAALLTLVGCTKVAPPEQSAGADSTLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPD 71

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVD  + L+  +      +      +  R   LQ+ ++D++  N    L R   +   
Sbjct: 72  GYDVDLAKELAKQMGVKLEVVN---TTSANRIPNLQTSKVDVVFCNFTRNLERAKEIA-- 126

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F        +  ++ K  GI S++ ++  +I    G+T      D  ++ NM+     F+
Sbjct: 127 FTNPYVVASEALLVKKSSGIKSINDMANRTIATVKGSTN----GDEVRSLNMQVKIQEFD 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +    A +  + DA   D + L      +   +       ++     A  +  GD  W
Sbjct: 183 SSQAAILAVKQGQADAMIEDNNFLAYQASLDSNLTVTNEA--LVPLEYNAFGVKAGDQVW 240

Query: 238 YNIVSWTHY 246
            N ++   +
Sbjct: 241 LNYLNLFLF 249


>gi|302537325|ref|ZP_07289667.1| glutamate binding periplasmic protein [Streptomyces sp. C]
 gi|302446220|gb|EFL18036.1| glutamate binding periplasmic protein [Streptomyces sp. C]
          Length = 284

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 11/231 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +    +        K   +  GI     G      +G ++GFDVD    ++  +   P
Sbjct: 30  AASDGGASGGT-----KSDKIVIGIKFDQPGLGLKTPDGKFEGFDVDVATYVAKELGYQP 84

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134
            +I++    + ER   + +  +  ++        R+    + F    +   Q  ++    
Sbjct: 85  DQIEWKQAVSAERENLISNGDVKFIAATYSINDKRKA--KVDFAGPYFLAHQDLLVRADD 142

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+ V  L+   +C   G+T+   +               F    E          DA 
Sbjct: 143 SSITKVEDLNKKKLCSVTGSTSAQNIKKDLAK---DADLQEFPGYSECLTGLENKAVDAL 199

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           T D S L           +  ++   +S       + +GD +    ++   
Sbjct: 200 TTDNSILAGYAAQEKNKGKFKLVGLSMSNENYGIGLKKGDKDLQTKINAAL 250


>gi|149909832|ref|ZP_01898483.1| hypothetical binding protein component ofABC transporter [Moritella
           sp. PE36]
 gi|149807164|gb|EDM67120.1| hypothetical binding protein component ofABC transporter [Moritella
           sp. PE36]
          Length = 266

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 86/250 (34%), Gaps = 16/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      + L  + F S S NA   L  I + G L+   + G + F     N  + GF
Sbjct: 1   MIKTKISKAIALGTIIFCSASVNAGAILDGIAESGELRACFDAGYMPFEMKAKNNRYIGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++  +      +            AL + + D++         R  ++ + F 
Sbjct: 61  DVDLGKVMAKQMGVKYIPVN---TAWDGIIPALITGKCDVIMAGMTVNAQR--NMKVNFA 115

Query: 120 PITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIV 175
                 GQ  I     K  I S   L+     V +   TT E+ +    K          
Sbjct: 116 DPYIVVGQSIILNPKLKGEIKSYKDLNNPKYTVASKLGTTGEVVVKRMLKKAKYN----A 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE   +        + DA   D+  +      N    E ++  +  +  PL  A+ QGD 
Sbjct: 172 FETETDAALEVINGKADAMIYDMPFVSIYAAQNSDKVEAIL--EPFTYEPLGWAVKQGDP 229

Query: 236 EWYNIVSWTH 245
           +  N ++   
Sbjct: 230 DMINFLNNFL 239


>gi|302338914|ref|YP_003804120.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301636099|gb|ADK81526.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 283

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 101/263 (38%), Gaps = 29/263 (11%)

Query: 1   MYKD----FFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINT 42
           M K       +    +++ FFT+                 N  ++ +I +RG LK G++T
Sbjct: 1   MKKSRSYVLMLIWFVVLLSFFTACGAPPKEENTAENESQRNGGLIDEISRRGVLKVGMST 60

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
             V +A    NG   GF++D  + L+  +  D   ++++P        AL + + D++  
Sbjct: 61  -FVPWAMNDKNGQLIGFEIDVAKRLAKDLGVD---VEFVPTKWSGIIPALLTGKFDVIIG 116

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTL 160
                   E SL + F     + G   + +K+      S+ +     + V A   T  T 
Sbjct: 117 GMGI--RPERSLKVNFTIPYDYSGMAIVANKETAPGYGSLEEFDNPDVTVVARIGT--TA 172

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
           AD  K +    +  +F+   +     +  R  A            + N   + ++ +P  
Sbjct: 173 ADAAKKYMPNANIKLFDDEAQALQELKTGRAHAMVASAPLPAFQAIENSD-TLYLPIPGT 231

Query: 221 ISKSPLAPAIIQGDTEWYNIVSW 243
            ++ P+  AI + + +  N+ + 
Sbjct: 232 FTREPIGFAIRKREADALNVFNS 254


>gi|262404205|ref|ZP_06080760.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
 gi|262349237|gb|EEY98375.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
          Length = 258

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 1   MKKWLVATALIAATVSGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +  +    + +P +      +L +++ D +      T  R+  + + F  
Sbjct: 52  VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERK--MKVDFTG 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI  K   ++   + L G  I VQ  TT +  L+D +         + +   
Sbjct: 107 KYALIPNKFIAKKGANLTFTKEGLKGVKIGVQRATTHDKYLSDNY---GDAVDIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++        +  A+ + D
Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDGYEFVGPSLTDPKWFGEGMGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 224 KDLTEKLNAAIAAL 237


>gi|294812666|ref|ZP_06771309.1| putative ABC transporter solute-binding protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326441179|ref|ZP_08215913.1| putative ABC transporter solute-binding protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294325265|gb|EFG06908.1| putative ABC transporter solute-binding protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 354

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 15/241 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74
             T  + +   + +I+KR  L  G++     +       GD  GFD+D  RA++  + D 
Sbjct: 81  SLTPSAADGPSVREIQKRRKLIVGVDQNSYRWGYRDPATGDLMGFDIDLARAIAEDLLDK 140

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              + +  ++  +R   LQ  ++D++ R    T  R   +   F    +  GQ  +  ++
Sbjct: 141 DGTVVFRAVSTDQRAPLLQEGKLDLVVRTMTITCKRAREVA--FSTAYFETGQQVLAPRQ 198

Query: 135 KGISSVSQ-LSGASICVQAGTTTELTLADYFKAH---------NMKYHPIVFERVEEIDA 184
             I+     L G  +C   G+T    L +                    +      +   
Sbjct: 199 SKITGHDASLKGKKVCTAEGSTAFDALEENAYGAIFRDPGDGTAADEDILTVPNQLDCLV 258

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             +    DA   D +           P+  +  P          A   G  +    V+  
Sbjct: 259 RVQEGLADAVVTDSALAAGQAAQ--DPTVELKGPRFKKVEYYGVAAAPGKDDLVRRVNKV 316

Query: 245 H 245
            
Sbjct: 317 L 317


>gi|115358997|ref|YP_776135.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115284285|gb|ABI89801.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 266

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 78/240 (32%), Gaps = 13/240 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +   ++    + S  A +L  +K+ G LK  +      F    A G  +GFDVD  +A+
Sbjct: 11  GLAAALLCVVATASHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAV 70

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +   P   Q++          LQ+ + D++      T  R     L F     +   
Sbjct: 71  AARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVYSSA 125

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             +  +       S+ +L G  + V  G+     +              V+    E    
Sbjct: 126 QLLQRQNDTRAFKSLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRD 180

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             A R DA   D   + +  + N              +  +     +G+ ++   +    
Sbjct: 181 LAAGRIDAAVNDR-LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239


>gi|121610274|ref|YP_998081.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121554914|gb|ABM59063.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 275

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 99/290 (34%), Gaps = 26/290 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           +F  + LC  +L   + + +A  + +IKK+G +  G+      +  V  +    G+D D 
Sbjct: 12  NFATAALCGALLSSHALNASAQSVEEIKKKGTVTIGVLVDFPPYGTVDNSNQPDGYDADV 71

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L+        ++  +P+    R   L + ++D+L  +   T  R   +   F     
Sbjct: 72  AKLLAKD---WGVRLNLVPVTGPNRIPFLLTNKVDLLIASFAPTPERAKQVQ--FSRPHS 126

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                   HKK  I + + L G  I V   +T +  L               F+      
Sbjct: 127 AATIVLYGHKKLSIKTPADLKGVRIAVARASTQDTALTAVAPE---GAEIRRFDDDASAM 183

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A  + + DA     +                 L  ++ +  +APA+  G  E    V+ 
Sbjct: 184 QALLSGQVDALGCATTI-AQRIDQRTNGEYENKL--VLRQQYMAPAMRLGRPELLKGVNT 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293
                          K ++       N   +++L +D  S    +L L+ 
Sbjct: 241 ------------FVGKYVD---NGGLNKLYKKWLQVDLPSMPATSLPLSN 275


>gi|251790186|ref|YP_003004907.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247538807|gb|ACT07428.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 278

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 94/242 (38%), Gaps = 13/242 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
           +S +    + FTS    A +L D+  +G LKC + + +  F+   AN     G DVD C 
Sbjct: 6   LSAVFASSVLFTSIGAQADLLADMTAQGELKCAVYSDVPPFSSPDANTRQLVGMDVDLCN 65

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL+  +     K+  +P + + R   + + + D+L  N  +T  R     + F    Y  
Sbjct: 66  ALAKQMG---LKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTR--GNQIQFSDPYYVA 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            +  ++ K+    ++    G  I    GTT+E ++      +      + F+       A
Sbjct: 121 KEMLLVKKENADQTLEYFKGKRISATKGTTSEQSI------NLKGGKAVTFQDSASAFLA 174

Query: 186 YRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              ++   +  ++     +         E  ++ + ++  P+   + + +      V+ +
Sbjct: 175 LEQNKAVGFVTNMMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALLAAVNTS 234

Query: 245 HY 246
             
Sbjct: 235 LK 236


>gi|157363723|ref|YP_001470490.1| extracellular solute-binding protein [Thermotoga lettingae TMO]
 gi|157314327|gb|ABV33426.1| extracellular solute-binding protein family 3 [Thermotoga lettingae
           TMO]
          Length = 241

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 95/258 (36%), Gaps = 29/258 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +  F+ ++ L  + F+                 +  G +     F  +  NG + G
Sbjct: 1   MKFTRAMFLILILLSAMTFS---------------RTITVGTSADFPPFEYI-ENGQFVG 44

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  R ++     D   ++++ ++      AL++ Q+D+++     T  R+    + F
Sbjct: 45  FDMDLMREIAKIAGFD---LKFVDMSFDSLIPALRAGQVDVVAAAMTITDERK--QVVDF 99

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVF 176
               +   Q  I+  +  ++     S   I VQ GTT +L   D   +  M  + +   +
Sbjct: 100 SIPYWTADQSVIVKSESPLTITVLFSKGKIGVQTGTTGDLWCTDNLVSTGMLPEKNLKRY 159

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +      +       DA   D     A +    +P    ++  I +      A+ +G+ E
Sbjct: 160 DTFVLALSDLLNGNIDAIVLDSP--VANRFAATKPV--RVVGIITTGEQYGVAVRKGEKE 215

Query: 237 WYNIVSWTHYAMVTAEEL 254
               ++     +  + ++
Sbjct: 216 LLEKINNAIKVLNESGKM 233


>gi|146319723|ref|YP_001199435.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|146321919|ref|YP_001201630.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           98HAH33]
 gi|253752713|ref|YP_003025854.1| putative amino-acid ABC transporter extracellular-binding protein
           [Streptococcus suis SC84]
 gi|253754539|ref|YP_003027680.1| amino-acid ABC transporter extracellular-binding protein
           [Streptococcus suis P1/7]
 gi|253756472|ref|YP_003029612.1| amino-acid ABC transporter extracellular-binding protein
           [Streptococcus suis BM407]
 gi|145690529|gb|ABP91035.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
 gi|145692725|gb|ABP93230.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           98HAH33]
 gi|251817002|emb|CAZ52651.1| putative amino-acid ABC transporter extracellular-binding protein
           [Streptococcus suis SC84]
 gi|251818936|emb|CAZ56779.1| putative amino-acid ABC transporter extracellular-binding protein
           [Streptococcus suis BM407]
 gi|251820785|emb|CAR47547.1| putative amino-acid ABC transporter extracellular-binding protein
           [Streptococcus suis P1/7]
 gi|292559334|gb|ADE32335.1| extracellular solute-binding protein [Streptococcus suis GZ1]
 gi|319759129|gb|ADV71071.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           JS14]
          Length = 267

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 20/221 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K    + L    +   + +++A          L  IK+ G ++ G       ++    
Sbjct: 1   MKKIAMFTSLLFAGIVLAACNSSAGTSNSTDQTLLAQIKEEGVIQIGTEGAYAPYSYHDE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G+DV+   A++  +      ++++          L + + D ++     T  R+ 
Sbjct: 61  SGKLVGYDVEVAEAVAEKLGVK---VEFVETEWDSMIAGLDAARFDTIANQVGITDERKA 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F     +     +  K    I+S + LSG        +      AD  + +    
Sbjct: 118 --KYDFSTPYTYIYGALVTQKDNTDITSFADLSGKKSANSLTS----NWADLARENG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
             +  +   +        R DA   D          +    
Sbjct: 170 EVVGVDGFSQAVELLNTGRVDATINDNLVYLDYVKQHADAP 210


>gi|311279130|ref|YP_003941361.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308748325|gb|ADO48077.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 266

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+           ++L  +K+RG L+ G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALMAGVSAKTFAAENLLNQVKERGSLRVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRKNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  +  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNDDLLKAVDNAI 243


>gi|293364416|ref|ZP_06611142.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|307702619|ref|ZP_07639571.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|291317262|gb|EFE57689.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|307623735|gb|EFO02720.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 268

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%)

Query: 3   KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           K   +++  L++  L F   +T +  +  IK +G L   +N     F     V       
Sbjct: 5   KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A++  +  +   +++ P++      +L S + D+       T  R  S    
Sbjct: 65  GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K       SV  L+   +  Q G+  E    +           + 
Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVQDLAQKKVGAQKGSIQETLAKETL----QNSSLVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +   +    ++ + DA   +          N   +      D   +   A A+ +   
Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V  T   +  + EL 
Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255


>gi|195973406|gb|ACG63349.1| allantoate transport periplasmic binding protein [Klebsiella
           oxytoca M5al]
          Length = 261

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 87/245 (35%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++     L     +  A  L DI+KRG ++  +         V  +   +G+D
Sbjct: 1   MKK-LLIALAGAACLLTNLSAAKADQLQDIEKRGTIRIAVPQDFPPLGSVGTDLQPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F  
Sbjct: 60  IDMARYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +   + LSG S+ V  G   ++ L         +     +E   
Sbjct: 115 AYAPFFLGVFGPKGAELKDPAALSGKSVGVTRGAVEDMVLTSVAPK---EAQIKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + +          + A+  +     +  +   ++  SP    + + +      
Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAI--SRQNADKAPVPSFMLKDSPCFIGLKKNEPALKAK 229

Query: 241 VSWTH 245
           V    
Sbjct: 230 VDALI 234


>gi|322375116|ref|ZP_08049630.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C300]
 gi|321280616|gb|EFX57655.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C300]
          Length = 268

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%)

Query: 3   KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           K   +++  L++  L F   +T +  +  IK +G L   +N     F     V       
Sbjct: 5   KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A++  +  +   +++ P++      +L S + D+       T  R  S    
Sbjct: 65  GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K       SV  L+   +  Q G+  E    +           + 
Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETL----QDSSLVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +   +    ++ + DA   +          N   +      D   +   A A+ +   
Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V  T   +  + EL 
Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255


>gi|299531723|ref|ZP_07045127.1| extracellular solute-binding protein [Comamonas testosteroni S44]
 gi|298720282|gb|EFI61235.1| extracellular solute-binding protein [Comamonas testosteroni S44]
          Length = 269

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 90/233 (38%), Gaps = 6/233 (2%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82
           +  IK+ G +  G      GF+ +       G+ +D C     A+ + +      I+Y  
Sbjct: 1   MKKIKESGTITLGHREASFGFSYISDTATPIGYSLDICMKIVDAIKAELKQPKIDIKYQV 60

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + ++ R   + +  +D+   +T   + R+  +   F P  +       +    GI S++ 
Sbjct: 61  VTSQNRIPLVTNGTVDLECGSTTNLVERQKDVA--FSPDIFRYNVRMAVKASSGIKSIAD 118

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G S+   AGTT+   L +  +   ++   +  +   +      + R  A+  D   L 
Sbjct: 119 LQGKSVVTTAGTTSFRLLRETNRGKVLEVTQLSGKDHLDSFLLLNSGRAAAFVLDDILLA 178

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            L      P E +I  + +     +  + + D ++  +V      M+ + E+ 
Sbjct: 179 GLIANTQNPKEFIITGENLRTENQSLMLRKDDPQFKALVDRVVVGMMKSGEME 231


>gi|228935474|ref|ZP_04098292.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228824226|gb|EEM70040.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 259

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|291451363|ref|ZP_06590753.1| sugar-binding protein [Streptomyces albus J1074]
 gi|291354312|gb|EFE81214.1| sugar-binding protein [Streptomyces albus J1074]
          Length = 321

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 14/230 (6%)

Query: 22  TNASILGDIKKRG----FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
              + L  IK R      L  GI+     +       G  +GFD+D  RA++  +  DP 
Sbjct: 67  AEGATLERIKSRTDKPRKLIVGIDQNSYRWGYRDPATGSLEGFDIDLVRAIAEELMGDPE 126

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            + +  +    R  A+ S ++D++ R    T   +    +AF    +  GQ  ++ K   
Sbjct: 127 AVVFRAIPTNRRVQAIDSGEVDMVVRTMTITC--DRIKEVAFSTAYFETGQQLLVPKGSR 184

Query: 137 IS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           I+   + L G  +C  AG+T    L +  +  +            +     +    DA  
Sbjct: 185 ITGHDTSLKGRKVCAAAGSTA---LTELEREAHGADISTTVPNQLDCLVRLQLGEVDAVV 241

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D +        +       ++ +  ++     A+ +   +    V+   
Sbjct: 242 TDSALAAGQAAQDP---MVELVGEPFTEEFYGVAMHKDAKDLVARVNQVL 288


>gi|241759765|ref|ZP_04757865.1| histidine-binding periplasmic protein [Neisseria flavescens SK114]
 gi|241319773|gb|EER56169.1| histidine-binding periplasmic protein [Neisseria flavescens SK114]
          Length = 267

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 11/256 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +  + L    L  T+    ++       +   + G N     F  + + G  +GFDV
Sbjct: 3   IKKWLATALACSALALTACGGQSNNASAPTDK-VYRVGSNAEFAPFESLDSAGKVEGFDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++ A      K+++     +  F +L +  +DI+      T   +    + F   
Sbjct: 62  DLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLFSDP 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +   Q  ++ K K ++S   L     + V  G T + +++      N       FE V 
Sbjct: 117 YFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFESVP 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            I         D+   D + +      N  +  + + LPD  +      A  +GD     
Sbjct: 175 LIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEATIK 233

Query: 240 IVSWTHYAMVTAEELG 255
           +++     +  + E  
Sbjct: 234 MLNDALKKVRESGEYD 249


>gi|319942095|ref|ZP_08016414.1| ABC-type amino acid transport/signal transduction system
           [Sutterella wadsworthensis 3_1_45B]
 gi|319804479|gb|EFW01357.1| ABC-type amino acid transport/signal transduction system
           [Sutterella wadsworthensis 3_1_45B]
          Length = 277

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 11/221 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  L  IK+ G +  G+ +    F  V + G + G+DV F   L+  +      ++Y+ 
Sbjct: 29  EARPLDVIKQSGEVVIGVFSDKAPFGYVDSQGKYAGYDVYFGDRLAKDLGVK---VKYIS 85

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           ++   R   L + ++DI+  N   T   + +  + F         G +  +   I+ V Q
Sbjct: 86  VDPASRVEFLVTGKVDIILANFTVTK--DRAEKVDFALPYMKVALGVVSPESAVITDVKQ 143

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G ++ +  GTT E      F+ ++ K     +++  +   A    R DA++ D + + 
Sbjct: 144 LDGKTLIIAKGTTAEPY----FEKNHPKVKLQKYDQYTDAYNALLDGRGDAFSTDNTEVL 199

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A  L +      V +P +     +APA+ +G+    + ++ 
Sbjct: 200 AWALVHK--GFKVGIPSLGDLDTIAPAVQKGNKGLLDWINQ 238


>gi|322376232|ref|ZP_08050725.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
 gi|321282039|gb|EFX59046.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
          Length = 271

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K       +++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKALTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSADLKEVVDKVIQ 248


>gi|260598415|ref|YP_003210986.1| cystine transporter subunit [Cronobacter turicensis z3032]
 gi|260217592|emb|CBA31849.1| Cystine-binding periplasmic protein [Cronobacter turicensis z3032]
          Length = 266

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 88/254 (34%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M    F       V  + L+           ++L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALFGRQALMGVMAVALVAGMSVKTYAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F  AL+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K+  + I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKENAQSIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +      +  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAAAGEPFSRQEAGVAVR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ ++   V    
Sbjct: 230 KGNDDFVKAVDSAI 243


>gi|317404136|gb|EFV84584.1| extracellular solute-binding protein, family 3 [Achromobacter
           xylosoxidans C54]
          Length = 272

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 17/262 (6%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K  F        + L LI     S + +A  L DI K G L+  I+ G+  +    A 
Sbjct: 1   MNKSVFPPRLRAAFAGLALIGGLAVSGAAHADQLDDIMKAGKLRVAIDLGVPPYGMKDAA 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  G DV+  R L+  +      ++ +P     R   LQ+ + DI+  +   T  R+  
Sbjct: 61  LNPTGSDVETARLLAKGLG---VTLEIVPTTGANRVPFLQTGKADIVISSMSVTPERQKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F              +   ++S + LS   +    GTT +  L             
Sbjct: 118 --IDFSTPYAAILAVVGAPRDMKLTSAADLSSKKVIATRGTTNDTELTRIAPK---DAQI 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I F+       A  + + D +    + L  +      P++ +    ++  + LA  + + 
Sbjct: 173 IRFDDDATSITAVVSGQADIFATAPALLRTI--NEKAPAKQMESKFVMRLNMLAIGLRKN 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           +    + +     A + + EL 
Sbjct: 231 EPALKDKLDGWVRANLKSGELN 252


>gi|170692054|ref|ZP_02883218.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170143338|gb|EDT11502.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 258

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 12/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    ++L   +L  T    +A  L +I K G LK  +      F  V  +   +G+D
Sbjct: 1   MRRTLLAALLASPVLAVT-VPAHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L+ ++     K++ +P+N+  R   LQ+ ++D++  +   T  RE    + F  
Sbjct: 60  IETAALLAKSM---NVKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKV--IDFST 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 QG        +S  + L+G ++    G   EL L               FE   
Sbjct: 115 AYAPYYQGVFGPADVKVSGPADLTGKTVGATRGALEELGLTQMAP----NATIKRFEDNN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              AA+ + +            A+      P        +I  SP    + + +      
Sbjct: 171 ATIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQK 228

Query: 241 VSWTH 245
           V+   
Sbjct: 229 VNAAI 233


>gi|169334519|ref|ZP_02861712.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259236|gb|EDS73202.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM
           17244]
          Length = 278

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 107/296 (36%), Gaps = 30/296 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK------KRGFLKCGINTGLVGFAEVKANG 54
           M K   ++ + L  +   S  +       +       K   L  GI+        V  NG
Sbjct: 1   MKKGKKIAAIVLTSVLGFSLLSGCGSKDTVSAEAQFTKDKTLVVGIDNTYPPMEYVDKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD++F +A+   +      ++++  +    F  L + + D++  +      R+  L
Sbjct: 61  KTVGFDIEFAKAIGEKMGRK---VEFVNSSWDAIFAGLDADKYDLVISSVGVNKDRQEQL 117

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            L        + Q  I  K    I SV +L+G  + VQ  TT+  T   Y+ +  + +  
Sbjct: 118 AL--SNPYLANQQVIISSKSGKQIKSVEELAGKKVGVQVSTTSNDTCN-YYLSKGIDFDL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             ++ + E   A      D    D   +      +   ++ V   D ++  P+A A  + 
Sbjct: 175 REYDGMTEAFVALEGGSVDCVVTD--LVVGEYYVHKNTNKFVKTCDKLTNEPIAVAAKKS 232

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
           +    + ++         EEL         ++K +     ++  G D + NI   L
Sbjct: 233 NQALIDKINPIL------EELSKDGT----MTKIS-----KKVFGKDLTQNIDTTL 273


>gi|238784713|ref|ZP_04628717.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC
           43970]
 gi|238714392|gb|EEQ06400.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC
           43970]
          Length = 253

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 78/241 (32%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +  + L             +L  +K+RG L  G+      F+    +G   GF+VDF  A
Sbjct: 1   MVAVALATGLNVKSYAAGDLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANA 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +       +  P        +L+SK+ID+       +  R+      F       G
Sbjct: 61  LAEHMGIKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFSTPYTVSG 115

Query: 127 QGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              +  K      +    L G  + V  G+  E  L +  K          ++       
Sbjct: 116 IQVLTKKGNEGNFTKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKYQ 171

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L     +   +     ++     A+ + + E    ++  
Sbjct: 172 DLRVGRTDAILVDR--LAALDLVKKTNNTLAVAGPAFARQESGVALRKDNPELLAAINQA 229

Query: 245 H 245
            
Sbjct: 230 I 230


>gi|227524321|ref|ZP_03954370.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088552|gb|EEI23864.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus hilgardii ATCC 8290]
          Length = 283

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 16/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
            K   V +  L++   +           TN      + K+  +  G++ G V       +
Sbjct: 6   KKCPLVIVTLLLMFVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDGFVPMGFETKS 65

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G+DVD  +A+         K+ + P++       L++  ID++         R   
Sbjct: 66  GKIVGYDVDLAKAVFKQYG---IKVNFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAK- 121

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH- 172
             + F      + Q  I  +K  I+S + +      VQAG+   + +    K    +   
Sbjct: 122 -KVTFSEPYLVNKQVLISKEKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180

Query: 173 --PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             PI+++   E      + R      D              + +  +P    K      +
Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQKDRATYQSVPSQFPKEYYGVGM 240

Query: 231 IQGDTEWYNIVSWTHY 246
            +GDT+    +     
Sbjct: 241 RKGDTKLKQKIDAGLN 256


>gi|325978614|ref|YP_004288330.1| amino acid ABC transporter amino acid-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178542|emb|CBZ48586.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 273

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 94/281 (33%), Gaps = 18/281 (6%)

Query: 1   MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           M  K  F+ +L L   + L     S+N ++   I K+G L   I+     F     V   
Sbjct: 1   MKIKKIFLGVLALISVLTLAACGSSSNENLQEKIVKKGKLVVAISPDYAPFEFKALVNGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G DV+  +A++  +  +   ++   ++      +LQ+ + D+      +T  R   
Sbjct: 61  DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      ++        +SV  LSG  + VQ GT  E    D         
Sbjct: 118 --YDFSDAYYETENAILVKASDVDTYTSVDSLSGLKVAVQKGTIEENLAKDQL----SDS 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +    + E     ++ +  A   +          N   +      +       A A+ 
Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           +   E   +V+     +   ++      +  Q++ D  + D
Sbjct: 232 KDSGELVKMVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272


>gi|157370637|ref|YP_001478626.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157322401|gb|ABV41498.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 257

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 88/253 (34%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L+     S    A     I        G++ G   F  +  +G+  GFD
Sbjct: 1   MKK----TLAVLLTSLALSGPAAAQTFDTI------SFGVDGGYPPFDVLAPSGEITGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    +K  ++    +    AL + + D +  +   T  R+    + F  
Sbjct: 51  IDIANALCTQL---HAKCVFVKQPFESMIAALNAHKFDAIIASLTITDERKK--EVDFTD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    +  V+ L G ++ VQ G+  E     ++         + +   
Sbjct: 106 RYYRSSAQLVARKGSALLPDVASLKGKTVGVQTGSIHEAYAKQHWG--GKGVKIVSYANQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D +   +  +   R  +      +I  S +      A+ + + 
Sbjct: 164 DNVYLDLMSGRINASLQDNTQAASSFIDTPRGQKFAFAGPVIEDSSISSDVGIAVGKDNP 223

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 224 ALRDALNGAIKAI 236


>gi|89900317|ref|YP_522788.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89345054|gb|ABD69257.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 255

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 82/251 (32%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + +  L   SF+              LK  I+     F    A+G   GFD
Sbjct: 1   MKK--LLLAIAIGSLCAVSFAQGKD----------LKVAIDPTYEPFTFKTADGKPTGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     K  ++          LQ+K+ D++  +   T   +    + F  
Sbjct: 49  VDIANALCEQV---KRKCVFVEQVWDSMIPGLQAKKYDVIISSMSITA--DRLKVIDFTN 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ K       + L G  + V  G+T E       K        + +E  +
Sbjct: 104 KYYNTPSRIVVKKDVKFDGPASLKGKKLGVLKGSTQEKYAMGELKTVG--VEVVPYEAQD 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           ++    ++ R D    D   +    L+     ++ ++   +             + +G+T
Sbjct: 162 QVYLDIKSGRLDGTVADFVEVTGGFLSKPEGKDYNLVGPELYTEKYFGTGVGIGLRKGET 221

Query: 236 EWYNIVSWTHY 246
              N ++    
Sbjct: 222 ALKNELNAAIK 232


>gi|294631810|ref|ZP_06710370.1| glutamate binding protein [Streptomyces sp. e14]
 gi|292835143|gb|EFF93492.1| glutamate binding protein [Streptomyces sp. e14]
          Length = 278

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 15/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M      ++  +++    S +   S   D K  G       +  GI     G  +    G
Sbjct: 1   MKLRKVTAVSAVVLALAVSATACGS--DDKKDEGSSGGGKKIAIGIKYDQPGLGQKTPQG 58

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFDVD  + ++  +  +  +I++    + +R   LQ   ++ ++     T  RE   
Sbjct: 59  -YSGFDVDVAKYVAKKLGYNEDQIEWKESKSADRETMLQRGDVEFIAATYSITPEREK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F        Q  ++      I S + L+   +C   G+T+   + D       K + 
Sbjct: 116 KVDFAGPYLLAHQDVLVRADDTSIKSPADLNSKKLCSVTGSTSAQNIKDTLA---PKANL 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + +          +    DA T D S L      +    +  +    ++       + +G
Sbjct: 173 LKYPTYSACLTGLQNKAIDALTTDDSILAGYAAQDQFKGKFKLGGLKMTNENYGIGVKKG 232

Query: 234 DTEWYNIVS 242
                 I  
Sbjct: 233 SDLKAKINK 241


>gi|239833356|ref|ZP_04681684.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821419|gb|EEQ92988.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 279

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 11/229 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  L  IK  G LK  ++     F  V    +  GFD     A++  +   P  I    
Sbjct: 44  QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMKLKPQLIT--- 100

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    L++ + D +  +   T  RE    + F    Y  G+   + +   +  +  
Sbjct: 101 TAWDGIVAGLRAGKFDTVVGSMTITPEREK--AVDFVGPYYHAGRAVFVKEDSAVQKLDD 158

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISAL 201
           L G ++ V  G T E    +        +    ++ + E+     + R DA    +I  +
Sbjct: 159 LKGKTLGVTLGETHEKWARE-----QGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 213

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            A+K T  +  +            +  AI + + E    +      ++ 
Sbjct: 214 VAIKETGQKVRKLDTPNIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA 262


>gi|229084061|ref|ZP_04216354.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-44]
 gi|228699238|gb|EEL51930.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-44]
          Length = 265

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 74/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + N   L  IKK G +  G       F     
Sbjct: 1   MKKLFSVLAVATLAVGIVAGCGKEEKKDTANQDALQQIKKSGEIVVGTEGTYPPFTFHDG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SGKLTGFDVELTEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     +S + + G     Q+ T+     AD  K +  K 
Sbjct: 116 QKKYDFSKPYISSSAALVVAKDKDKPASFTDIKGMK-AAQSLTS---NYADIAKKNGAKI 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +      +      + R D +T +        L   + +   I+      S       
Sbjct: 172 EGVE--GFSQAVELLNSGRVD-FTINDKLSVLNYLQTKKDANIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G       V    
Sbjct: 229 KGSDTLVQEVDKAL 242


>gi|77456472|ref|YP_345977.1| cystine transporter subunit [Pseudomonas fluorescens Pf0-1]
 gi|77380475|gb|ABA71988.1| Diaminopimelate-binding protein / L-cystine-binding protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 266

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 80/229 (34%), Gaps = 16/229 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  IK +G +  G+      F+ V A+G   GF+V+   AL+  +       + 
Sbjct: 27  AVAGEQLQQIKDKGVINVGLEGTYPPFSFVDADGKLSGFEVELSEALAKKLGVKA---KI 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK----KG 136
            P        AL+SK++D++      +  R+      F       G   ++ K       
Sbjct: 84  QPTKWDGILAALESKRLDVVVNQVTISEERKK--KYDFSEPYTVSGIQALVLKDKAAALN 141

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S + LSG  + V  GT  E  +    +A+        ++      A     R DA   
Sbjct: 142 IKSAADLSGKKVGVGLGTNYEQWV----RANVPGADVRTYDDDPTKFADLNNGRTDAILI 197

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D  A         +    V   +  S+     A+ +G+ E    V+   
Sbjct: 198 DRLAALEYAQKAPK---TVAAGEAFSRQEAGIALRKGEPELLAAVNKAL 243


>gi|153010171|ref|YP_001371385.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562059|gb|ABS15556.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 261

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 11/229 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  L  IK  G LK  ++     F  V    +  GFD     A++  +   P  I    
Sbjct: 26  QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMQLKPQLIT--- 82

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    L++ + D +  +   T  RE    + F    Y  G+   + +   +  +  
Sbjct: 83  TAWDGIVAGLRAGKFDTVVGSMTITPEREK--AVDFVGPYYHAGRAVFVKEDSAVQKLDD 140

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISAL 201
           L G ++ V  G T E    +        +    ++ + E+     + R DA    +I  +
Sbjct: 141 LKGKTLGVTLGETHEKWARE-----QGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 195

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            A+K T  +  +            +  AI + + E    +      ++ 
Sbjct: 196 VAIKETGQKVRKLDTPDIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA 244


>gi|89099280|ref|ZP_01172158.1| hypothetical protein B14911_08355 [Bacillus sp. NRRL B-14911]
 gi|89086126|gb|EAR65249.1| hypothetical protein B14911_08355 [Bacillus sp. NRRL B-14911]
          Length = 263

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 91/263 (34%), Gaps = 19/263 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVK-ANG 54
           M       +   I+    +    AS  G+    G      L  G +     F  +  A G
Sbjct: 1   MLLFLVSILAAGILAACGASEQPASSGGEAGDSGSDDEKVLIMGTSADYPPFEYIDTAKG 60

Query: 55  D-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           D   GFDVD   AL+  +      +Q   +       AL+S Q+DI+      T  R+  
Sbjct: 61  DDIIGFDVDLANALAEKLGYK---VQVEDIEFSGLVQALKSGQVDIVLAGMSPTEERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  I Y      +  K  GI  +  L G ++ VQ G+  E    D  +   +    
Sbjct: 117 -NIDFTDIYYTARHMIVTKKDSGIEKLEDLKGKTVGVQLGSIQEGKANDIAEE--IDIKV 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-Q 232
               R+ EI       R DA   + +       +N+  +  VI  +      L  AI   
Sbjct: 174 ENRNRIPEIVQELMTGRFDAAIIEDTVATGYFESNEDLNGFVIEDE----EELGSAIALP 229

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D+E  +  +     M  + EL 
Sbjct: 230 KDSELTDDFNKALQEMKDSGELE 252


>gi|300928951|ref|ZP_07144455.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 187-1]
 gi|300463105|gb|EFK26598.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 187-1]
          Length = 266

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +   +   P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVE---VSLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|300741910|ref|ZP_07071931.1| glutamate-binding protein [Rothia dentocariosa M567]
 gi|311111806|ref|YP_003983028.1| amino acid ABC transporter binding protein [Rothia dentocariosa
           ATCC 17931]
 gi|300381095|gb|EFJ77657.1| glutamate-binding protein [Rothia dentocariosa M567]
 gi|310943300|gb|ADP39594.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Rothia dentocariosa ATCC 17931]
          Length = 282

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 88/262 (33%), Gaps = 25/262 (9%)

Query: 1   MYKDFFVSILCLII-----------LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K FF                      T  S+ +        +  ++ GI     G   
Sbjct: 1   MKKSFFNRAATKFFAASTAAALALGFTLTGCSSASDS------KPKIRIGIKYDQPGLGY 54

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                D+ GFDVD  R ++  +     +I+++   +  R   L + Q+D++      +  
Sbjct: 55  QDGQ-DYTGFDVDVARYIAGKLGYSEDQIEFVESPSANRENMLSNGQVDMILATYSISDS 113

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHN 168
           R+    + F    Y  GQ  ++   +   +    L+G ++C   G+T+   + D +  + 
Sbjct: 114 RKK--SVDFAGPYYVAGQDLLVRADETSITGPDSLNGKNLCSVTGSTSAKKIQDTYAKN- 170

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
              + +      +   A      DA T D   L  L  T     +  ++    +      
Sbjct: 171 --VNLVKQNSYSDCVVALNGGVVDAVTTDDIILAGLAATKANKGKLKLVGKTFTTEKYGV 228

Query: 229 AIIQGDTEWYNIVSWTHYAMVT 250
            + +G  +    ++     MV 
Sbjct: 229 GLPKGTDKC-EAINKAINEMVE 249


>gi|302522778|ref|ZP_07275120.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78]
 gi|302431673|gb|EFL03489.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78]
          Length = 261

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 10/227 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +++     + RG L  G         E    +G + GFD++  + +++ +    ++I + 
Sbjct: 9   DSATWRKARARGRLVVGAKEDQPYLGEKDPASGRYSGFDIEIAKMVAAGLGFPANRISFR 68

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  +LQ+ QID           R+  +G  F    Y  GQG ++ K   GI   
Sbjct: 69  TIASANRETSLQNGQIDYYVGTYTINDNRKKLVG--FAGPYYMAGQGLLVRKDEDGIKGP 126

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L G  +C  AG+T    +   +         + ++           ++ DA T D S 
Sbjct: 127 ADLDGKRVCSAAGSTPYQRIQHDYPKA----DLVSYDTYSICVDNLLTYQVDAVTTDDSI 182

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           L         P E  ++    S+ P    + + D      +     A
Sbjct: 183 LLGYAAKV--PEELKVVGKPFSEEPYGIGVPRKDNALRLAIDGILAA 227


>gi|312862828|ref|ZP_07723068.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|311101688|gb|EFQ59891.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
          Length = 279

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 14/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M       ++ L +   ++       +T         K   +K G +   V     + +G
Sbjct: 1   MKTVLLSCLVILPLFALSACSSRSHFATQKDQWQIYTKEKKIKIGFDATFVPMGYEEKDG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D   A+      D   +++  ++   +   L++  ID++      T  R+   
Sbjct: 61  SYVGFDIDLATAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDERKK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
              F      + Q  +  K  GI SV+ +SG ++  QAG++            +      
Sbjct: 116 SADFTEPYMVNEQVLVTKKSSGIDSVAGMSGKTLGAQAGSSGYDAFNASPKILRDIVANQ 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + +    +      + R D    D          +    ++ ++P        A    
Sbjct: 176 KAVQYSTFTQALIDLDSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFAVGAR 235

Query: 232 QGDTEWYNIVSW 243
           + D      ++ 
Sbjct: 236 KADKTLIKKINQ 247


>gi|170735288|ref|YP_001774402.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169821326|gb|ACA95907.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 259

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 22/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +   +L   + +              ++ G       F    A+G  +G +
Sbjct: 1   MKKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + +   +     K Q++ ++      AL++KQID +      T  RE    + F  
Sbjct: 50  IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPERE--QSVDFTR 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I       F+  +  GI+  +  L G +I VQ  +T E  L     A     +  V++ +
Sbjct: 105 IFTTAPVQFVAKQGSGITDGAATLRGKTIGVQTASTHESYLRRRLPAGKSGINVKVYQTL 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E      A R DA   D +  Y       R      +   I+ + +     A A+ +GD
Sbjct: 165 DEAWLDLEAGRVDAVLADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224

Query: 235 TEWYNI 240
                +
Sbjct: 225 APLKAL 230


>gi|228995721|ref|ZP_04155384.1| Amino acid ABC transporter, solute binding protein [Bacillus
           mycoides Rock3-17]
 gi|228764098|gb|EEM12982.1| Amino acid ABC transporter, solute binding protein [Bacillus
           mycoides Rock3-17]
          Length = 271

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 21/253 (8%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K        + +       + S   S           +  ++     F   + +G   
Sbjct: 11  MRKKMLTVFAAITLCVSFVLGACSKETSTNEG----KEFRYAMSGLYKPFNFKENDGKLV 66

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +   P  +       +     L++K+ D++  +   T   +    + 
Sbjct: 67  GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 121

Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G   F+  K   ISSV  L G  I V   +T +  +               +
Sbjct: 122 FTNPYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKTLVE------KHTDQITEY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +  AI + D E
Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 234 MVKKVNKALEEII 246


>gi|156933484|ref|YP_001437400.1| cystine transporter subunit [Cronobacter sakazakii ATCC BAA-894]
 gi|156531738|gb|ABU76564.1| hypothetical protein ESA_01302 [Cronobacter sakazakii ATCC BAA-894]
          Length = 266

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 86/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+           ++L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSVKTYAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F  AL+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K+    I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKENADSIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +      +  S+     AI 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAAAGEPFSRQEAGVAIR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ ++   V    
Sbjct: 230 KGNDDFVKAVDNAI 243


>gi|254699862|ref|ZP_05161690.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis bv. 5 str. 513]
          Length = 257

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 86/248 (34%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L  +  +   +     K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   ALS A+    +K   +  +       LQ+ + D +  +   T  R+  +   F  
Sbjct: 56  LDIANALSEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228

Query: 239 NIVSWTHY 246
              +    
Sbjct: 229 EQFNAAIK 236


>gi|229003348|ref|ZP_04161178.1| Amino acid ABC transporter, solute binding protein [Bacillus
           mycoides Rock1-4]
 gi|228757966|gb|EEM07181.1| Amino acid ABC transporter, solute binding protein [Bacillus
           mycoides Rock1-4]
          Length = 271

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 21/253 (8%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K        + +       + S   S           +  ++     F   + +G   
Sbjct: 11  MRKKILTVFAAITLCVSFVLGACSKETSTNEG----KEFRYAMSGLYKPFNFKENDGKLV 66

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +   P  +       +     L++K+ D++  +   T   +    + 
Sbjct: 67  GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 121

Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G   F+  K   ISSV  L G  I V   +T +  +               +
Sbjct: 122 FTNPYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKTLVE------KHTDQITEY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +  AI + D E
Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 234 MVKKVNKALEEII 246


>gi|229192366|ref|ZP_04319330.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC
           10876]
 gi|228591146|gb|EEK49001.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC
           10876]
          Length = 259

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|284992299|ref|YP_003410853.1| family 3 extracellular solute-binding protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284065544|gb|ADB76482.1| extracellular solute-binding protein family 3 [Geodermatophilus
           obscurus DSM 43160]
          Length = 296

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 84/225 (37%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S + ++ + G +  G      GF      G  +GFDV+  + ++  +   P +I++  
Sbjct: 46  AGSTMAELAEAGTITVGTKFDQPGFGLANPQGVPEGFDVEVTKIIAGELGIAPEEIEWKE 105

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSV 140
             +  R   +Q+  +DI+         R+    + F    Y  GQ  ++       I   
Sbjct: 106 TVSANRESFIQNGDVDIVVATYTINDARK--QLIDFAGPYYVAGQDIMVATGNPLAIEGP 163

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  +C   G+T    + D +          +F+   +   A R  + DA T D   
Sbjct: 164 DDLAGKRVCSVEGSTPAQNIRDNYPEA----QLTLFDVYSKCADALRNGQVDAVTTDNVI 219

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L  L           ++ +  ++ P    + +GD E+   ++ T 
Sbjct: 220 LTGLVQGGQ--GAFELVGNPFTQEPYGIGLTKGDDEFRGFINDTL 262


>gi|306826066|ref|ZP_07459402.1| amino acid ABC superfamily ATP binding cassette transporter
           solute-binding protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431782|gb|EFM34762.1| amino acid ABC superfamily ATP binding cassette transporter
           solute-binding protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 268

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%)

Query: 3   KDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           K   +++  L++L   F   +T +  +  IK +G L   +N     F     V       
Sbjct: 5   KKVLMTMFGLLMLPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A++  +  +   +++ P++      +L S + D+       T  R  S    
Sbjct: 65  GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K       SV  L+   +  Q G+  E    +           + 
Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETL----QNASLVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +   +    ++ + DA   +          N   +      D   +   A A+ +   
Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V  T   +  + EL 
Sbjct: 236 ELKEAVDKTIQKLKDSGELE 255


>gi|238796471|ref|ZP_04639979.1| Extracellular solute-binding protein family 3 [Yersinia mollaretii
           ATCC 43969]
 gi|238719676|gb|EEQ11484.1| Extracellular solute-binding protein family 3 [Yersinia mollaretii
           ATCC 43969]
          Length = 262

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 87/254 (34%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     +  LI+     S    A  +  I        G++ G   F  +  +G+  GF
Sbjct: 1   MKKTLAALLTGLILSAPMLSAPVAAQTIETI------SFGVDGGYPPFDVLSPSGEITGF 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   AL   +    +K  ++    +    AL +++ D +  +   T  R+    + F 
Sbjct: 55  DIDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFT 109

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      +  K    +  V+ L G ++ VQ G+  E     ++         + +  
Sbjct: 110 DRYYRSAAQLVARKGSPLLPEVASLKGKTVGVQTGSIHETYAKKHWS--GQGVKIVSYAN 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGD 234
            + +     + R +A   D     +  +   R  +      +I    +      A+ + +
Sbjct: 168 QDNVYLDLLSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKEN 227

Query: 235 TEWYNIVSWTHYAM 248
               + ++    A+
Sbjct: 228 PALRDALNGAIKAI 241


>gi|225853737|ref|YP_002735249.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae JJA]
 gi|225722793|gb|ACO18646.1| ABC transporter solute-binding protein - amino acid transport
           [Streptococcus pneumoniae JJA]
          Length = 268

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K   +   SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSIPYYTAKNKLIVKKSDLVTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       + A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYSVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|218905290|ref|YP_002453124.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|228947871|ref|ZP_04110158.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229123674|ref|ZP_04252869.1| Arginine-binding extracellular protein artP [Bacillus cereus
           95/8201]
 gi|218540193|gb|ACK92591.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|228659809|gb|EEL15454.1| Arginine-binding extracellular protein artP [Bacillus cereus
           95/8201]
 gi|228811858|gb|EEM58192.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 259

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S + ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFVLILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|228477553|ref|ZP_04062186.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
 gi|228250697|gb|EEK09895.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
          Length = 283

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 84/256 (32%), Gaps = 18/256 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K         ++ L +   ++       +T         K   +K G +   V     
Sbjct: 1   MKKIVKTILLGCLVILPLFALSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G + GFD+D   A+      D   +++  ++   +   L++  ID++      T  R
Sbjct: 61  EKDGSYVGFDIDLATAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169
           +      F      + Q  +  K  GI SV+ ++G ++  QAG++         K     
Sbjct: 118 K--QSADFTVPYMVNEQVLVTKKSSGIDSVAGMAGKTLGAQAGSSGYDAFNASPKILKDI 175

Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + +    +      + R D    D          +   +++ ++P        A
Sbjct: 176 VANQKAVQYSTFTQALIDLDSGRIDGLLIDRVYANYYLEKSGVLNQYNVMPAGYEGESFA 235

Query: 228 PAIIQGDTEWYNIVSW 243
               + D      ++ 
Sbjct: 236 VGARKADKTLIKKINQ 251


>gi|148985460|ref|ZP_01818665.1| hypothetical protein CGSSp3BS71_08436 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147922418|gb|EDK73538.1| hypothetical protein CGSSp3BS71_08436 [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799279|emb|CBW31802.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae OXC141]
          Length = 268

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQNGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKKSGELD 255


>gi|82776400|ref|YP_402749.1| cystine transporter subunit [Shigella dysenteriae Sd197]
 gi|81240548|gb|ABB61258.1| putative periplasmic binding transport protein [Shigella
           dysenteriae Sd197]
          Length = 266

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 92/254 (36%), Gaps = 20/254 (7%)

Query: 1   MY-----KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M      +   + ++ + ++   S  + A   +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLAHLGRQALIGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F + L+  +  +       P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAQQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  ++ S+     A+ 
Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEVFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V+   
Sbjct: 230 KGNEDLLKAVNDAI 243


>gi|116628192|ref|YP_820811.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|116101469|gb|ABJ66615.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
          Length = 265

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 76/261 (29%), Gaps = 15/261 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K  F ++ L           +       IK+   +     +    F     V      
Sbjct: 1   MKKFWFMLTALVATCFLVACRGSQGVSTKTIKENKKIVVATESEFAPFEFKSLVNGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+   +      +++  ++      ++QS + DI       T  R+     
Sbjct: 61  VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +S   L+  ++  Q G+  E      F         +
Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETIAKKQFSKA----SVV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    ++ +  A   + +        ND  +         S    A AI +G 
Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLASFNLKSDSSDAYAVAIRKGS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    ++        + +  
Sbjct: 232 DDLLKEINAVIKETKESGKFD 252


>gi|302551504|ref|ZP_07303846.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736]
 gi|302469122|gb|EFL32215.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736]
          Length = 356

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 17/242 (7%)

Query: 16  FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67
             +  S +   +  IK R      L  G++     +     N     + +GFD+D    +
Sbjct: 79  TLSPSSADGDTIKAIKNREGEKRKLIVGVDQNSYRWGYRDPNSGRTAELEGFDIDLVHRI 138

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  I  DP  +Q+  +   +R  A+Q  ++D++ R        +    +AF    +  GQ
Sbjct: 139 AEDILGDPDAVQFKAIPTDQRIPAIQDGRVDMVVRTMTINC--DRIKDVAFSAPYFKTGQ 196

Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEID 183
             +  K   I      L+G  IC  AG+T   TL +  K   +              +  
Sbjct: 197 QVLAPKSSPIKGYDDTLAGRRICTAAGSTAYSTLEEDQKDGTLPATTDISGTVPNQLDCL 256

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +   +    +       +  D  +      A+ +   +    V+ 
Sbjct: 257 VRLQLGEADAVVTDGALAASQAAQDP---TVQLKGDAFTAEYYGVAMKKDADDLVRRVNQ 313

Query: 244 TH 245
             
Sbjct: 314 IL 315


>gi|115359035|ref|YP_776173.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115284323|gb|ABI89839.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 259

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 88/246 (35%), Gaps = 22/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +   +L   + +              ++ G       F    A+G  +G +
Sbjct: 1   MKKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + +   +     K Q++ ++      AL++KQID +      T  RE    + F  
Sbjct: 50  IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPERE--QSVDFTR 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I       F+  +  G++  +  L G +I VQ  +T E  L     A     +  V++ +
Sbjct: 105 IFTTAPVQFVAKQGSGVTDNAATLRGKTIGVQTASTHESYLRRRLPASKSGINVKVYQTL 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E      A R DA   D +  Y       R      +   I+ + +     A A+ +GD
Sbjct: 165 DEAWLDLEAGRVDAVFADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224

Query: 235 TEWYNI 240
                +
Sbjct: 225 APLKAL 230


>gi|253990333|ref|YP_003041689.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781783|emb|CAQ84946.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica]
          Length = 244

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 96/252 (38%), Gaps = 23/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F ++L  + L  T+            ++  ++         F  + AN   +GFD
Sbjct: 1   MKKLLFATLLGTVTLSATAT-----------EKETIRFATEATYPPFEFIDANNQIQGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + I    +   +   +      +L+ ++ D L+   D T  R+    + F  
Sbjct: 50  IDLANALCTKI---NATCTFTNQSFDSLIPSLKFRRFDALAAGMDITPERQK--QVDFTD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ISSV++L G  + +Q GTT +  L +  K        + ++  +
Sbjct: 105 TYYDNSAVFIAIKG-KISSVAELKGKQVGIQNGTTHQKYLIEQQKE----IKTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD +A+      ND      + +         L  A+ +G+ E  
Sbjct: 160 NAILDLKNGRLDAIFGDTAAINEWLKKNDNLETVGNKVTDPNYFGIGLGFAVRKGNKELQ 219

Query: 239 NIVSWTHYAMVT 250
           N ++     +  
Sbjct: 220 NKLNKALTDIKQ 231


>gi|239624576|ref|ZP_04667607.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47_FAA]
 gi|239520962|gb|EEQ60828.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47FAA]
          Length = 299

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 8/212 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G +        +  +G++ GFD++  + ++  +  +       P+    + + L+
Sbjct: 70  GTLIVGFDQDFPPMGFIGDDGEFTGFDLELAQEVAKRLGLEYKP---QPIAWDAKDMELE 126

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           +  ID +      T   +     A+      + Q F++ K  GI+S + L+G  +  Q  
Sbjct: 127 AGNIDCIWNGFTMTGRED---DYAWTDAYMANTQVFVVAKDSGIASQADLAGKVVECQVD 183

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L +           +                 DA   D   + A      R ++
Sbjct: 184 SSAEAALKEVPDLTATFKDLLTTADYNTAFMDLEQGAVDAIAMD--VIVAGYQIQQRNAD 241

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            VIL D +S         + +TE  + V  T 
Sbjct: 242 FVILDDSLSAEEYGVGFKKDNTELRDKVQKTL 273


>gi|330466435|ref|YP_004404178.1| extracellular solute-binding protein family 3 [Verrucosispora maris
           AB-18-032]
 gi|328809406|gb|AEB43578.1| extracellular solute-binding protein family 3 [Verrucosispora maris
           AB-18-032]
          Length = 282

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 82/232 (35%), Gaps = 7/232 (3%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             S +    I+G  + +  L  G+     G      +  ++GFD++  + ++  +  D  
Sbjct: 24  AGSGTGATGIVGKAESQKKLVIGVKADQPGLGLQTGS-QYEGFDIEIGKIIAKGLGVDAG 82

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            I++    +  R   ++   +D++         R+    + F    Y  GQ  ++     
Sbjct: 83  NIEWKTTVSANREPFIEQGTVDLVVATYTINDERK--QKINFAGPYYIAGQDLLVKSDST 140

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+   QL+G ++C  +G+T    + +    +        F+   +        + DA T 
Sbjct: 141 ITGPDQLAGKTVCSVSGSTPAKRIQE----NYPDARLQQFDSYSKCLPLLDGGQVDAVTT 196

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           D   L      +    +  ++    S  P    + + DT     V+    A 
Sbjct: 197 DDIILAGYAAQDQYAGKFKVVGSTFSDEPYGIGLKKDDTTGCEKVNEILKAA 248


>gi|229180434|ref|ZP_04307777.1| Arginine-binding extracellular protein artP [Bacillus cereus
           172560W]
 gi|228603181|gb|EEK60659.1| Arginine-binding extracellular protein artP [Bacillus cereus
           172560W]
          Length = 259

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 91/258 (35%), Gaps = 13/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   +++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKASEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-QGDTEW 237
           + EI    +A R DA   + +             +   +    +   +  AI    +++ 
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK---DLQGIEIKEAPEEVGAAIALPKNSDK 230

Query: 238 YNIVSWTHYAMVTAEELG 255
               +     M  + E+ 
Sbjct: 231 TAEFNKVIKKMQESGEMD 248


>gi|37522352|ref|NP_925729.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421]
 gi|35213352|dbj|BAC90724.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421]
          Length = 260

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 96/244 (39%), Gaps = 11/244 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++L + +L        A+ L  I +R +L  G+   L         G+  GF+
Sbjct: 1   MPAALRTAVLTVSLLALLQTVGAAAPLEAILQRRYLIVGVKENLYPLGFRDKRGELAGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R  + A+F DP+ ++ +P+  ++R  AL+ + +D++  N    + R     + F  
Sbjct: 61  IDLARQFAEALFADPTAVKLVPVRNRDRLEALEKQHVDLVIANLSIGVPRAR--AVDFSF 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 Q  ++ ++  + ++S L    + V +G++ E  +  +          +     +
Sbjct: 119 PYLTVNQAVLLKRESTLRTLSDLERVRLAVLSGSSNERAIRAFLPGAG----LVPVASYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238
           E   A    R D +  D + L            + +L   +  S L+ A+ +   +    
Sbjct: 175 EGVQALETGRADGFAADGTVLGGWVQ---DRPAYRLLSTELDTSGLSVAMPRGLQNDSLR 231

Query: 239 NIVS 242
             V+
Sbjct: 232 RWVN 235


>gi|24379607|ref|NP_721562.1| putative ABC transporter, glutamine binding protein [Streptococcus
           mutans UA159]
 gi|290580393|ref|YP_003484785.1| putative ABC transporter glutamine binding protein [Streptococcus
           mutans NN2025]
 gi|24377556|gb|AAN58868.1|AE014954_7 putative ABC transporter, glutamine binding protein [Streptococcus
           mutans UA159]
 gi|254997292|dbj|BAH87893.1| putative ABC transporter glutamine binding protein [Streptococcus
           mutans NN2025]
          Length = 277

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 84/252 (33%), Gaps = 12/252 (4%)

Query: 2   YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K     I  L ++  T+     + +       + +  +  G +   V       NG   
Sbjct: 4   KKAVTALITFLAVVTLTACGKKGADSQDNWKKFESKKSVTIGFDNTFVPMGFKDKNGKNV 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   A+ +       K+++ P+N   +   L++ +ID++      T  RE +  ++
Sbjct: 64  GFDIDLANAVFNEYG---IKVKWQPINWDLKETELKNGKIDLIWNGYSKT--RERARKVS 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174
           F      + Q  +  K  GI+S + + G ++  Q+G++         K            
Sbjct: 119 FTKPYMKNDQVLVTKKSSGITSFADMKGKALGAQSGSSGYDAFTANPKILKDIVKDNDAS 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E   +     +  R +    D                + I+    +    +  + + D
Sbjct: 179 QYETFTQAFIDLKNDRINGLLIDRVYANYYLKQEKELDNYNIIKGKYASEDFSVGVRKSD 238

Query: 235 TEWYNIVSWTHY 246
                 V+    
Sbjct: 239 KTLKKKVNQAFK 250


>gi|260544753|ref|ZP_05820574.1| amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260756609|ref|ZP_05868957.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260760039|ref|ZP_05872387.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260763278|ref|ZP_05875610.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260882426|ref|ZP_05894040.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|261216081|ref|ZP_05930362.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|261220464|ref|ZP_05934745.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261313306|ref|ZP_05952503.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261318695|ref|ZP_05957892.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261323127|ref|ZP_05962324.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261756834|ref|ZP_06000543.1| amino acid ABC transporter [Brucella sp. F5/99]
 gi|265985406|ref|ZP_06098141.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|265986494|ref|ZP_06099051.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|265996186|ref|ZP_06108743.1| extracellular solute-binding protein family 3 [Brucella ceti
           M490/95/1]
 gi|260098024|gb|EEW81898.1| amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260670357|gb|EEX57297.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260673699|gb|EEX60520.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260676717|gb|EEX63538.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260871954|gb|EEX79023.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|260917688|gb|EEX84549.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|260919048|gb|EEX85701.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261297918|gb|EEY01415.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261299107|gb|EEY02604.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261302332|gb|EEY05829.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261736818|gb|EEY24814.1| amino acid ABC transporter [Brucella sp. F5/99]
 gi|262550483|gb|EEZ06644.1| extracellular solute-binding protein family 3 [Brucella ceti
           M490/95/1]
 gi|264658691|gb|EEZ28952.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|264663998|gb|EEZ34259.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
          Length = 256

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 80/248 (32%), Gaps = 15/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  +++         A      K+   ++         F  +  +G   GFD
Sbjct: 1   MKSLVLAGLASVVLTVSVQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +       LQ+ + D +  +   T  R+  +   F  
Sbjct: 55  LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 109

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227

Query: 239 NIVSWTHY 246
              +    
Sbjct: 228 EQFNAAIK 235


>gi|228477051|ref|ZP_04061689.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
 gi|228251070|gb|EEK10241.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
          Length = 265

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 73/261 (27%), Gaps = 15/261 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K  F ++ L           +       IK++  +     +    F     V      
Sbjct: 1   MKKFWFILTALVATCFLVACSGSQGVSPKTIKEKKKIVVATESEFAPFEFKSLVNGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+   +      +++  ++       +QS + DI       T  R+     
Sbjct: 61  VGADIELAKAIGEKLGVK---VEFSVMSFDNVLANVQSGKADIAIAGISVTDERKKV--Y 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +S   L+  ++  Q G+  E                +
Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDYTSTDSLAKQTVGTQKGSVQETVAKKQIPKA----SVV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    ++ +  A   + +        ND  +              A A  +G 
Sbjct: 172 SLASNGEMINELKSGQLQAVVLEKAIAEGYIAQNDDLTLANFNLKSDGTDAYAVATRKGS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    ++        + +  
Sbjct: 232 DDLLKEINAVIKETKDSGKFD 252


>gi|228987346|ref|ZP_04147466.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229157735|ref|ZP_04285810.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC
           4342]
 gi|229198283|ref|ZP_04324990.1| Arginine-binding extracellular protein artP [Bacillus cereus m1293]
 gi|228585162|gb|EEK43273.1| Arginine-binding extracellular protein artP [Bacillus cereus m1293]
 gi|228625692|gb|EEK82444.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC
           4342]
 gi|228772318|gb|EEM20764.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 259

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I S+  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSIEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|322831658|ref|YP_004211685.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321166859|gb|ADW72558.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 263

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +     +L   + S  A  L DI+KRG L+  +      F  V  +   +G+D
Sbjct: 3   MNKRLL-AWAGAAMLVLQASSVMADQLQDIQKRGVLRVAVPQDFPPFGSVSKDLQPEGYD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F  
Sbjct: 62  IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSN 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    +   +S + +LSG +I V  G   +L L               +E   
Sbjct: 117 AYAPFFLGVFGAQGDKLSDLKELSGKTIGVTRGAVEDLALTGVAPK---DAKIQRYEDNN 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + + +        + A+      P++  +   ++  SP    + + +    + 
Sbjct: 174 TTLSAYLSGQVEYIATGNLVVAAIARM--NPAKAPVSKVMLKDSPCYVGLRKDEPALKDK 231

Query: 241 VSWTH 245
           V+   
Sbjct: 232 VNELI 236


>gi|30264229|ref|NP_846606.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Ames]
 gi|47529672|ref|YP_021021.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49187057|ref|YP_030309.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis str. Sterne]
 gi|49480914|ref|YP_038217.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|167633720|ref|ZP_02392044.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0442]
 gi|170687301|ref|ZP_02878519.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0465]
 gi|190565746|ref|ZP_03018665.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035047|ref|ZP_03102454.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus W]
 gi|196042412|ref|ZP_03109674.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus NVH0597-99]
 gi|227816930|ref|YP_002816939.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CDC 684]
 gi|228916791|ref|ZP_04080356.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228929201|ref|ZP_04092228.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229602720|ref|YP_002868449.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0248]
 gi|254683919|ref|ZP_05147779.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254721754|ref|ZP_05183543.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A1055]
 gi|254736267|ref|ZP_05193973.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254744156|ref|ZP_05201839.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Kruger B]
 gi|254754061|ref|ZP_05206096.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Vollum]
 gi|254758246|ref|ZP_05210273.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Australia 94]
 gi|30258874|gb|AAP28092.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Ames]
 gi|47504820|gb|AAT33496.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49180984|gb|AAT56360.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Sterne]
 gi|49332470|gb|AAT63116.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|167531126|gb|EDR93813.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0442]
 gi|170668918|gb|EDT19663.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0465]
 gi|190562665|gb|EDV16631.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|195992586|gb|EDX56547.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus W]
 gi|196026758|gb|EDX65403.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus NVH0597-99]
 gi|227007028|gb|ACP16771.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CDC 684]
 gi|228830491|gb|EEM76101.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228842978|gb|EEM88061.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229267128|gb|ACQ48765.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0248]
          Length = 259

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|328956328|ref|YP_004373661.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Coriobacterium glomerans PW2]
 gi|328456652|gb|AEB07846.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Coriobacterium glomerans PW2]
          Length = 282

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 87/256 (33%), Gaps = 17/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M+    + +     L        + +S +  IK RG LK G+   + G+  +   +G ++
Sbjct: 13  MFGMAAIGVAAAGSLVGCGEDSGSGSSKIEAIKSRGKLKAGVKKDVPGYGYLDPASGKYE 72

Query: 58  GFDVDFCRALSSAIF-------DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           G ++D C  +++++             +++  +  K R   + +  +DI+      T  R
Sbjct: 73  GMEIDLCYQVAASVLEVSYEEAKQKDLVEFKDVTPKTRGPLIDNDNLDIICATYTITDTR 132

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F      D  G ++ K  G+  +  L G  I V  G+ T+  +          
Sbjct: 133 KE--SYDFSEPYRTDYVGMMVKKSSGMEDLDDLDGKVIGVSQGSDTKAAITKMLADQKAD 190

Query: 171 YHP--IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
             P    F     + +A  A   D +  D S    LK   D   E +             
Sbjct: 191 AKPTYQEFPDYPSLKSALDAGNVDVFAMDRS---TLKNYMDDSVELLREDIKFGPQEYGI 247

Query: 229 AIIQGDTEWYNIVSWT 244
           A  +G      +    
Sbjct: 248 ASKKGSDLSPVVAKTV 263


>gi|302542073|ref|ZP_07294415.1| glutamate-binding protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302459691|gb|EFL22784.1| glutamate-binding protein [Streptomyces himastatinicus ATCC 53653]
          Length = 302

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 9/224 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++  L   +KRG +  G          V   G   GFD++  + +++ +     KI +  
Sbjct: 53  DSPTLKAAQKRGKIVIGAKADQPFLGFVDTEGKRSGFDIEIAKMVAADLGFSADKITFKT 112

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +++  R  ++   Q+D           R+  +G  F    Y  G   ++ K +   +   
Sbjct: 113 VDSNVRETSISKGQVDYYVGTYTINDERKKQVG--FAGPYYQAGADLLVRKDEKGITGPD 170

Query: 143 -LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G  IC   G+T    +                 +           + DA T D + L
Sbjct: 171 SVKGKKICSIVGSTPLQEIKKP----KYGAKTTELSKYSLCVKQLLDGQVDAVTTDDAIL 226

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   RPS+  ++    ++ P    + + D    + ++ + 
Sbjct: 227 KGYAAQ--RPSKLKLVEKPFTEEPYGVGMNKNDKVLRDAITDSL 268


>gi|307129014|ref|YP_003881030.1| cystine ABC transporter periplasmic-binding component [Dickeya
           dadantii 3937]
 gi|306526543|gb|ADM96473.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 257

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L   +L  ++ +     L  IK  G +K G       +    A+G   GFD
Sbjct: 1   MMKKSRLALLTGALLVTSALAQAQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +        ++          + +K+ D +      T  R       F  
Sbjct: 61  VDVGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKERRA--KYDFTK 115

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+     GI S + L G     Q+ T+    LA  + A       +  +  
Sbjct: 116 PYIDAKSVLIVRGDNTGIKSFNDLKGHKSA-QSLTSNYSKLATSYGA-----EIVPTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R +A   D  +    K          ++    S  P A  + +   +  +
Sbjct: 170 NQSLELVLSGRAEATLNDNLSFLDFKKHKPDA-NVKVVATAESGDPSAILVRKNQPQLVD 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 ALNNAL 234


>gi|227544221|ref|ZP_03974270.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri CF48-3A]
 gi|227185792|gb|EEI65863.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri CF48-3A]
          Length = 256

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +        I++R  +  G++   V     + NG   G+DVD  RA+         K+ +
Sbjct: 36  ADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 92

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P++   +   L++  ID+L         R     +AF      + Q  +  KK  I ++
Sbjct: 93  QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 150

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197
           + ++G ++ VQ G+T    L +  K    K     P++++          A+R      D
Sbjct: 151 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQGILMD 210

Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVS 242
                         + +   +   +     A  + +GD      ++
Sbjct: 211 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKIN 256


>gi|225023167|ref|ZP_03712359.1| hypothetical protein EIKCOROL_00019 [Eikenella corrodens ATCC
           23834]
 gi|224943991|gb|EEG25200.1| hypothetical protein EIKCOROL_00019 [Eikenella corrodens ATCC
           23834]
          Length = 276

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 87/268 (32%), Gaps = 20/268 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF----STNASILGDIKKRG--------FLKCGINTGLVGFA 48
           M K    ++ C  I          +  AS   D    G         L+   N     F 
Sbjct: 3   MKKWLATALACSAIALSGCGNSGGTQQASQPADANASGASAPSSEKVLRVATNAEFAPFE 62

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               +G   GFD+D   AL+        ++++   +    F +L++   D++      T 
Sbjct: 63  SKNPDGSLSGFDIDLINALAKEAGY---RVEFKDQSWDSLFNSLRNGDADVVVAAVTITP 119

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAH 167
            R     + F    +   Q   + + K ++SV  L     + V  G T +L  +    A 
Sbjct: 120 ER--QQSMLFTDPYFEITQVVAVPEGKQVASVEDLKNLNRVGVVTGNTGDLAASKLLGAT 177

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           N       FE +  +    +    DA   D S +      N      +I           
Sbjct: 178 N--PKVTRFESLPLLLKELQNGGVDAAVSDSSVVMEFIKHNGDKGFTMIKVPDFEAEHYG 235

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A+ Q DTE  + ++    A+  + E  
Sbjct: 236 IALRQDDTELRDTLNKALAAIKASGEYD 263


>gi|226330763|ref|ZP_03806281.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198]
 gi|225201558|gb|EEG83912.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198]
          Length = 244

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 92/249 (36%), Gaps = 27/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F ++L  I L  T+            ++  ++         F  + AN    GFD
Sbjct: 1   MKKILFAALLTSITLSATAA-----------EKETIRFATEATYPPFEMIDANNQIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + I  D     +   +      +L+ ++ + L    D T  R+    + F  
Sbjct: 50  VDLANAMCAKINAD---CTFTNQSFDSLIPSLKFRRFEALMAGIDITPERQK--QVDFTD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   IS V+ L G  I VQ GTT +  + +  K        + ++  +
Sbjct: 105 SYYDNSAVFITVKG-KISDVANLKGKQIGVQNGTTHQKFINEQHKE----MKTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R +A  GD + +         P   ++   +   +     LA A+ +G+ +
Sbjct: 160 NAVLDLKNGRIEAIFGDTAVVNEWL--KKNPELGIVGDKVADPNYFGTGLAIAVRKGNAD 217

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 218 LQDKLNKAL 226


>gi|260568086|ref|ZP_05838555.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|260154751|gb|EEW89832.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40]
          Length = 256

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  +++         A      K+   ++         F  +  +G   GFD
Sbjct: 1   MKSLVLAGLASVVLTVSIQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +      +LQ+ + D +  +   T  R+  +   F  
Sbjct: 55  LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 109

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227

Query: 239 NIVSWTHY 246
              +    
Sbjct: 228 EQFNAAIK 235


>gi|225018272|ref|ZP_03707464.1| hypothetical protein CLOSTMETH_02210 [Clostridium methylpentosum
           DSM 5476]
 gi|224948969|gb|EEG30178.1| hypothetical protein CLOSTMETH_02210 [Clostridium methylpentosum
           DSM 5476]
          Length = 263

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 83/248 (33%), Gaps = 11/248 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     ++ +  + +F      +A    +  K   L  G++         + + +  G
Sbjct: 1   MKKLAAILLAGVLALTVFVGCGGKDAGNADNGNKE-TLVVGLDPEFPPMGFKENDDEIVG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A++  +     ++++ P++   + L + + +ID++      T  RE    L  
Sbjct: 60  FDIDLANAVAEEMG---VQMKFQPIDWSSKELEIDTGRIDMIWNGFSVTPEREE--ALLL 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 +    +  K   IS V  L G  + +Q  ++      +   +  +         
Sbjct: 115 TKPYLNNNMIVVTLKDSAISKVEDLEGKKVVLQKESSALDAFQEAPVSEKV-ADLTQLSS 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        R +A   D +        +       IL + +     A  + +G+ E  
Sbjct: 174 NVDCFQDLENGRAEAMVVDETVAKYYLNLHKDK--FKILDESLGAEKYAIGLKKGNDELK 231

Query: 239 NIVSWTHY 246
           + +     
Sbjct: 232 DKLEAAIT 239


>gi|23501838|ref|NP_697965.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|161618911|ref|YP_001592798.1| extracellular solute-binding protein [Brucella canis ATCC 23365]
 gi|163843223|ref|YP_001627627.1| extracellular solute-binding protein [Brucella suis ATCC 23445]
 gi|254701713|ref|ZP_05163541.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513]
 gi|254704255|ref|ZP_05166083.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686]
 gi|256369380|ref|YP_003106888.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|23347774|gb|AAN29880.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|161335722|gb|ABX62027.1| extracellular solute-binding protein family 3 [Brucella canis ATCC
           23365]
 gi|163673946|gb|ABY38057.1| extracellular solute-binding protein family 3 [Brucella suis ATCC
           23445]
 gi|255999540|gb|ACU47939.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
          Length = 268

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 86/254 (33%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G    K   I   +   L+G +I VQ  TT     A+Y +          +  
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234
            EE        R DA   D   L     + D     ++           P    AI +G 
Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231

Query: 235 TEWYNIVSWTHYAM 248
            E     +    A+
Sbjct: 232 PELVAKFNAAIKAI 245


>gi|298291644|ref|YP_003693583.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296928155|gb|ADH88964.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 254

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 17/224 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +IKK   ++ G       F  V   G   GFD+D  +AL   +  +     ++  +   
Sbjct: 22  AEIKK---VRIGTEGAYPPFNSVDTTGQLVGFDIDIAKALCEKMKVE---CTFVAQDWDG 75

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSG 145
              AL +K+ D +  +   T  R+    + F    Y     F+  K   I+ ++   L G
Sbjct: 76  IIPALLAKKYDAIVASMSITDERKK--QVDFTIPYYLTPGNFMAPKDTKITDITPAGLKG 133

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             I  Q+ TT+   L D +K         ++   +E +A   A R DA   D    Y   
Sbjct: 134 KVIGAQSSTTSASYLEDKYK----GSEAKLYPTQDEANADLAAGRLDAVLVDKFVGYEWL 189

Query: 206 LTNDRPS-EHVILPDIISKSP--LAPAIIQGDTEWYNIVSWTHY 246
              D       + PD+   +P     A+ + DTE   +++    
Sbjct: 190 EKTDAGKCCKFVGPDLADVNPDGTGIAVRKEDTELREMLNKAIK 233


>gi|238749315|ref|ZP_04610820.1| Extracellular solute-binding protein family 3 [Yersinia rohdei ATCC
           43380]
 gi|238711970|gb|EEQ04183.1| Extracellular solute-binding protein family 3 [Yersinia rohdei ATCC
           43380]
          Length = 257

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  LI+    +    A  +  I        G++ G   F  +  +G+  GFD
Sbjct: 1   MKKTLIALLTGLIL----ATPVAAQTIDTI------SFGVDGGYPPFDVLAPSGEITGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  ++    +    AL +++ D +  +   T  R+    + F  
Sbjct: 51  IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIVASLSITDERKK--EVDFTD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    +  V+ L G ++ VQ G+  E     ++         + +   
Sbjct: 106 RYYRSSAQLVARKGSPLLPEVASLQGKTVGVQTGSIHEAYAKKHWG--GQGVKIVSYANQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D     +  +   R  +      +I    +      A+ + + 
Sbjct: 164 DNVYLDLLSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNP 223

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 224 ALRDALNGAIKAI 236


>gi|257461100|ref|ZP_05626198.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441474|gb|EEV16619.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 267

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 19/243 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L +  L        ++ L  IK++G ++ GI+     F+ V  +G + GF+
Sbjct: 1   MKKIILALMLAVCSLL-------SNTLTQIKEKGVIRIGIDGSSPPFS-VAKDGGYSGFE 52

Query: 61  VDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +     L   IF D   KIQY+     +R  A+Q  ++D+       T  RE    + F 
Sbjct: 53  ILLIEGLVKEIFGDKGSKIQYVVTVGDDRIKAVQDNRVDLDIALISVTKEREKL--VDFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    G +      I  VS L+G +I  Q GTT    + DYF       + +     
Sbjct: 111 DPYFSVNIGVLTRSDDNIRKVSDLNGKTILAQPGTT----VFDYFTKQGY--NVVPCASA 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E     ++ + D Y  D   ++A  + + +    V + ++ S   LA A+ +G+TE  N
Sbjct: 165 NECFNDLKSGKGDGYGDDNLLVFAYAVVDRK--VEVNIKNLGSTDFLAIAVQKGNTELLN 222

Query: 240 IVS 242
            V+
Sbjct: 223 AVN 225


>gi|254719051|ref|ZP_05180862.1| extracellular solute-binding protein [Brucella sp. 83/13]
 gi|306838979|ref|ZP_07471801.1| extracellular solute-binding protein [Brucella sp. NF 2653]
 gi|306405946|gb|EFM62203.1| extracellular solute-binding protein [Brucella sp. NF 2653]
          Length = 268

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 86/254 (33%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G    K   I   +   L+G +I VQ  TT     A+Y +          +  
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234
            EE        R DA   D   L     + D     +I           P    AI +G 
Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLVEWLKSPDGACCKMIGTFPPVTEIHGPGAGIAIKKGR 231

Query: 235 TEWYNIVSWTHYAM 248
            E     +    A+
Sbjct: 232 PELVAKFNAAIKAI 245


>gi|296132382|ref|YP_003639629.1| extracellular solute-binding protein family 3 [Thermincola sp. JR]
 gi|296030960|gb|ADG81728.1| extracellular solute-binding protein family 3 [Thermincola potens
           JR]
          Length = 268

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 25/267 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAEV 50
            K F V +L  ++       + A                IK +G L  G       F   
Sbjct: 5   KKLFVVFLLGSMVFLVGCGGSRAVTGEKPVQNTDDSWTKIKNKGELVVGFCAAYPPFESR 64

Query: 51  KANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                 + GFDVD  RAL++ +      ++++    +     LQ    DIL      +  
Sbjct: 65  DEKTKEFVGFDVDLARALAAEMGVK---VRFIDAEWQGLLGGLQKGDYDILITCMSKSET 121

Query: 110 REISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R     +    + Y  G   ++ K    I   + L G  + VQ G+ +E  +        
Sbjct: 122 R--GQNVNMSDVYYRLGDVIVVRKDDNNIRRQNDLQGKIVGVQLGSGSEQLVDKMQGLK- 178

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  +    E     +  R DA                +   + ++   ++++ +  
Sbjct: 179 ---ETKKYNYNPEAFLDLKNGRIDAVIVG---YAYAVNQIKQDPSYKVVGKPLAEAEIVM 232

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + +G       V+     +    E  
Sbjct: 233 VMRKGADSLTQKVNEALANLKANGEYD 259


>gi|259046943|ref|ZP_05737344.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Granulicatella adiacens ATCC
           49175]
 gi|259036386|gb|EEW37641.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Granulicatella adiacens ATCC
           49175]
          Length = 282

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 17/258 (6%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVK 51
           M K       ++++ + ++     +  AS          +++  +  G +   V     +
Sbjct: 1   MKKRKGILGLLALVGVAVMTLAGCTQLASNPKVDNWDKYQQQKSITVGFDNTFVPMGFEE 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NGD+ GFD++  + +S  +      + + P++   +   LQ+  ID +      T  R 
Sbjct: 61  KNGDYAGFDIELAQYVSKKLG---ITVHFQPIDWDMKETELQNGTIDAIWNGYSATDER- 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHN 168
               +AF      + Q  ++ K  GI S S ++G ++  Q G++  L   ++    K   
Sbjct: 117 -REKVAFTIPYMQNTQILVVKKTSGIHSASDMTGKALGAQNGSSGMLDFEEHPEVLKNRV 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  ++ V E     +  R DA   D         T     E+  +P        A 
Sbjct: 176 KGGDADQYQSVNEAIIDLKNDRIDALLIDRVYADYYLTTEGIADEYDTIPSGFESESFAV 235

Query: 229 AIIQGDTEWYNIVSWTHY 246
            +   D +    ++    
Sbjct: 236 GVRPADKKLLEALNEAFK 253


>gi|91777477|ref|YP_552685.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91690137|gb|ABE33335.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 282

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 101/285 (35%), Gaps = 18/285 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K    S++   +  F +     + NA  L DIK RG +   I+     +    AN + 
Sbjct: 1   MSKRRLSSLVLAALFPFGALIHPLAANADTLDDIKSRGTMTVAIDPTFAPYEYTDANNNI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD     A++  +      I+Y  ++       L +   D+     + T  R   L  
Sbjct: 61  VGFDPAVMDAVARHLGVK---IEYQRMSFSGIIPGLLAHSFDVEGSALNVTSERAKRLAY 117

Query: 117 AFRPITYFDGQGFI---MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK--- 170
              P +       +     K    +++  L+G +  V++ +  E  L  + +    K   
Sbjct: 118 V-VPTSKTVNGALVRSDFRKIPQPATIESLAGLTAAVKSASAPEQILKQFNETLKAKGLA 176

Query: 171 -YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I  + V++  AA    R D    D++ L  +      P +     ++     +A A
Sbjct: 177 PIQLISVDSVDQTVAALMTRRADFVFDDMTVLAGVIKQ--NPGKLKSTGELGPSQWIAWA 234

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273
               DT     +S    AM  + EL  + + N+       T+  +
Sbjct: 235 TRPDDTRLNKAISDQILAMKKSGELARLQKANLGVTFDTPTSDFI 279


>gi|55823400|ref|YP_141841.1| ABC transporter substrate-binding protein, amino acid
           [Streptococcus thermophilus CNRZ1066]
 gi|55739385|gb|AAV63026.1| ABC transporter substrate-binding protein, amino acid
           [Streptococcus thermophilus CNRZ1066]
          Length = 278

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 18/254 (7%)

Query: 1   MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M   K   + +  +  L    + S++ + L  +K +G L   +N     F          
Sbjct: 3   MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKIKGTLTVALNPHFAPFEFKTIQDGKD 62

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D++  + +   +      +++  ++      ++QS + DI       T  R+   
Sbjct: 63  TIAGADIEIAKVIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 118

Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              F    Y      ++ K    K    +S  S  SI VQ G+  E       KA+    
Sbjct: 119 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLSDA 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +   +  E     ++ + +    + +        N   +   I     S    A A+ 
Sbjct: 174 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 233

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 234 KGSDDLKAKVNKII 247


>gi|297156741|gb|ADI06453.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces bingchenggensis BCW-1]
          Length = 290

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 7/223 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++S L   +KRG L  G              G   GFD++  + +++ +     +I++  
Sbjct: 41  DSSTLKAAQKRGKLIIGAKADQPYLGFEDTTGKRSGFDIEIAKMVAADLGFSEDQIEFKT 100

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +++  R  ++   Q+D           R+  +G A  P         + H +KGI+    
Sbjct: 101 VDSNVRETSISKGQVDYYVGTYTINDERKKQVGFA-GPYYVAGADLLVRHDEKGITGADS 159

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           + G  +C   G+T    +                 +           + DA T D + L 
Sbjct: 160 VKGKKVCSIVGSTPLQEIKKP----KYGAKTTELGKYSLCVKQLLDGQVDAVTTDDAILK 215

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                  RPS+  ++    ++ P    + + D    + +S   
Sbjct: 216 GYAAQ--RPSKLRVVGKPFTEEPYGIGMNKDDKALRDAISDAL 256


>gi|258404610|ref|YP_003197352.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257796837|gb|ACV67774.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 278

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 21/250 (8%)

Query: 5   FFVSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
               ++ + +L   + S         AS L  I+KRG L+ G +T    +A     G++ 
Sbjct: 10  MIGCVMAVALLGTAAQSADVREALSQASALEQIQKRGNLRVGFST-FKPWAMKNKKGEFI 68

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF++D  +AL++ +  +P    ++P        AL + + DI+         R  +L + 
Sbjct: 69  GFEIDVAKALAADMGVEPE---FVPTKWSGIIPALLTGKFDIIIGGMGIRPQR--NLKVN 123

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHP 173
           F       G   + HK    G  S+   +    +I  + GTT       +          
Sbjct: 124 FSVPYDHSGMSIVAHKSVAPGYESLEDFNKPSVTIAARIGTTAAQAAKTHMPEA----TI 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +F+   +        R  A            + +       +  +  +  P+  AI +G
Sbjct: 180 RLFDDEAQALQELLTQRAHAMVASQPLPEQQAILHKERLYLPLDGETFTTEPIGFAIRKG 239

Query: 234 DTEWYNIVSW 243
           D ++ N ++ 
Sbjct: 240 DIDFLNFLNN 249


>gi|239982702|ref|ZP_04705226.1| glutamate binding protein [Streptomyces albus J1074]
 gi|291454550|ref|ZP_06593940.1| glutamate binding protein [Streptomyces albus J1074]
 gi|291357499|gb|EFE84401.1| glutamate binding protein [Streptomyces albus J1074]
          Length = 277

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 12/234 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K GI     G  +    G + GFDVD    ++  +     +I++    + +R  AL 
Sbjct: 37  KTIKVGIKFDQPGIGQKTPQGTFTGFDVDVATYVAKELGYTEKQIEFKETPSADRENALS 96

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
              ++ ++ +      RE    + F        Q  ++     IS   +L G ++C  AG
Sbjct: 97  RGDVEFIAASYSINDEREA--KVDFAGPYLLAHQDLLIRADDKISKAEELDGKTLCSVAG 154

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   + + F           +    E     +    DA T D S L           +
Sbjct: 155 STSAQNVKEKFAK---GAQLKEYGTYSECLEGLQTGAVDALTTDDSILAGYASQEQYKGK 211

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNI 261
             +    +S       + +  +   + ++          +   A E      N 
Sbjct: 212 FKLSGLSLSNENYGIGV-KEGSALKDKINKALEKMVEDGSWDKAVEANFGPANY 264


>gi|152970962|ref|YP_001336071.1| cystine transporter subunit [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895478|ref|YP_002920213.1| cystine transporter subunit [Klebsiella pneumoniae NTUH-K2044]
 gi|262043452|ref|ZP_06016575.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|150955811|gb|ABR77841.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547795|dbj|BAH64146.1| cysteine transporter periplasmic binding protein [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259039194|gb|EEW40342.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 266

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M          +  + ++     S       ++L  IK+RG L+ G+      F+    +
Sbjct: 1   MKLALLGRQAMMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGVIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +   +  +  S+     A+ 
Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNDDLLKAVDGAI 243


>gi|320007608|gb|ADW02458.1| extracellular solute-binding protein family 3 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 304

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +      +KRG+L  G         E     G + GFD++  R +++++  +P  I++ 
Sbjct: 52  ESKTWKKAEKRGYLVVGAKEDQPYLGEKDPATGVYSGFDIEIARMMAASLGFEPDTIRFR 111

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQ+ QID          +R+  +G  F    Y  GQG ++      I   
Sbjct: 112 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDENDIHGP 169

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G ++C  AG+T    +A  +         + ++            + DA T D + 
Sbjct: 170 QDLAGKTVCSAAGSTPYQRIAADYPEA----DLVAYDTYSICVDNLLTFQVDAVTTDDAI 225

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L         P E  ++    S+ P    + + D      +    
Sbjct: 226 LLGFAAKA--PDEMKVVGKPFSEEPYGIGVPRSDNALRLALDDAL 268


>gi|331002715|ref|ZP_08326230.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330407128|gb|EGG86632.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 283

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 98/255 (38%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFAE 49
           M K   + +L ++     + S   S            L +IKK G +  G+ +    F  
Sbjct: 1   MKKGKLIGLLGILTAGVLALSACGSSSKQAGKNNFRTLDEIKKSGTINIGVFSDKHPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  NG+++G+D+ F   L+  +      I Y+   A  R   L++ ++DI+  N   T  
Sbjct: 61  VDENGEYQGYDIYFGNRLAEDLGVK---INYVSTEAANRVEYLETGKVDIILANFTVTPE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHN 168
           R     + F       G G I  +K  ++S+ +  +   + V +GTT E  +      + 
Sbjct: 118 RAE--AVDFALPYMNVGLGVISSEKDAVASLDNWNADDEMIVISGTTAEPYMT----KNY 171

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  ++       A       A+  D + + A    N  P   V +  +     +AP
Sbjct: 172 PNIKLQKYDTYANAKNALLNGTGKAWVNDNTEVIAFA--NSNPGYVVGIDSLGVNDTIAP 229

Query: 229 AIIQGDTEWYNIVSW 243
           A+ +G++     ++ 
Sbjct: 230 AVTKGNSSLLEWINT 244


>gi|89899831|ref|YP_522302.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89344568|gb|ABD68771.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 265

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 10/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +     I L     S  A  L +IK+R  +  GI+     F  + A     G D
Sbjct: 1   MIQSKKIISALAIALVAICTSVQADTLANIKQRNKVLVGIDLTFAPFGSMDAAMKPMGSD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V   + L+  +  +   ++ + L    R   L + ++D++  +   T  R+    + F  
Sbjct: 61  VSAAKMLAKDLGVE---LEIVQLTGPNRVPYLLTGKVDMVISSFSITPERKKV--IDFSV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +  K   I+ +  L+G  I +  G   E  L            P+ F+   
Sbjct: 116 PYSVSESVILAPKSVQITKLQDLAGKRIGLVRGNLQENLLKPIAPE---GMIPVRFDDDA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  + + DA  G    L  +   +        L   I   P    I + DT   N 
Sbjct: 173 SNVVALLSGQVDALGGSKELLPNIAKQSPEKQVESKLS--IGILPHGIGIRKEDTSLLNW 230

Query: 241 VSWTHYAMV 249
            +    A +
Sbjct: 231 TNQWVMANL 239


>gi|167563743|ref|ZP_02356659.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia oklahomensis EO147]
 gi|167570891|ref|ZP_02363765.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia oklahomensis C6786]
          Length = 266

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 82/250 (32%), Gaps = 16/250 (6%)

Query: 1   MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   K  F S +   ++   T+ +  A +L  +K+ G LK  +      F    ++G  +
Sbjct: 1   MKVLKPMFTSAVVAALVGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNSDGQLE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  +A+++ +   P   Q++          LQ+ + D++      T  R+    L 
Sbjct: 61  GFDVDVAKAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARK--QALD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F     +     I          +   L G  + V  GT      AD  K          
Sbjct: 116 FSQPYVYSAAQLIQRADDKHDYGAPGALQGKRLGVTLGT----NFADLAKTL-PGVDVRT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R D    D   L  L      P           ++ +     +G+ 
Sbjct: 171 YPGAPEKLRDVSAGRIDVSMDDRLMLPYLIKNAHMPLR-PGATVKGGETQMGIPFRKGNP 229

Query: 236 EWYNIVSWTH 245
           ++   +    
Sbjct: 230 KFAKAIDDAL 239


>gi|315283361|ref|ZP_07871572.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii
           FSL S4-120]
 gi|313613009|gb|EFR86940.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii
           FSL S4-120]
          Length = 486

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 101/279 (36%), Gaps = 24/279 (8%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K        ++++F           +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHLLQKFAAILLVFIFVFSGFTTVFAADTKDETLTKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K  K   +SV+  SG  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFVNGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T+    V+ +   +     L   QK  N++ 
Sbjct: 231 AIAMPKGSTDLQAKVNASIKDIQDTGLLKKYQKEANKLM 269


>gi|108810146|ref|YP_654062.1| putative periplasmic solute-binding protein [Yersinia pestis
           Antiqua]
 gi|167401600|ref|ZP_02307094.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|108782059|gb|ABG16117.1| putative periplasmic solute-binding protein [Yersinia pestis
           Antiqua]
 gi|167048982|gb|EDR60390.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
          Length = 253

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 82/222 (36%), Gaps = 13/222 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           + DIK+ G ++  +      F  +        G+DVD   A++  +      ++    N 
Sbjct: 1   MDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK---VELRATNP 57

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R   L SK++D+++ N   T  R     + F    +  GQ FI  K   + +   +  
Sbjct: 58  ANRIPLLASKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIARKG-VLKTPEDIGK 114

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             I    GT  E+TL +++         I ++       A R     A T D + L  L 
Sbjct: 115 LRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQDDAKLVGLL 170

Query: 206 LTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    +  I P  I+K      I +G+     +V+ T 
Sbjct: 171 GNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETL 212


>gi|307705805|ref|ZP_07642648.1| ABC transporter solute-binding protein [Streptococcus mitis SK597]
 gi|307620637|gb|EFN99730.1| ABC transporter solute-binding protein [Streptococcus mitis SK597]
          Length = 268

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++ L F   +  ++ L  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPLLFACSNNQSAGLEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSTPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSRQVDAVIFEEPVAKGFVENNPDLAIAELNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQRLKDSGELD 255


>gi|308177955|ref|YP_003917361.1| glutamate ABC transporter substrate-binding protein GluB
           [Arthrobacter arilaitensis Re117]
 gi|307745418|emb|CBT76390.1| glutamate ABC transporter, substrate-binding protein GluB
           [Arthrobacter arilaitensis Re117]
          Length = 276

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 7/240 (2%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ GI     G      + ++ GFDVD  + ++  +     +I+++   +  R   LQ+
Sbjct: 35  KIRIGIKYDQPGLGFKDGD-NYTGFDVDVAKYVAGELGYTEDQIEFISAPSANRETMLQN 93

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q+D++      T  R     + F    +  GQ  ++     I     L G ++C   G+
Sbjct: 94  DQVDMIFATYSITDERNKV--VDFAGPYFVAGQDLLVPNDSDIKGPEDLDGKNLCSVTGS 151

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T+   + D +  +    +        E          DA T D   L  L        + 
Sbjct: 152 TSAQKVKDNYAKN---TNLQELPGYAECTTQMSGGTIDAVTTDDIILAGLAAQPAYQGKF 208

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            ++    S+      +  G  +  +I +     M+ + E         + +    N +  
Sbjct: 209 KVVGAPFSEENYGVGLPDGTDKCADI-NAAITKMIESGEWQKALDKNTEGTGYKPNAETN 267


>gi|229047848|ref|ZP_04193427.1| Arginine-binding extracellular protein artP [Bacillus cereus AH676]
 gi|228723509|gb|EEL74875.1| Arginine-binding extracellular protein artP [Bacillus cereus AH676]
          Length = 259

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|227877818|ref|ZP_03995842.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           precursor [Lactobacillus crispatus JV-V01]
 gi|256850696|ref|ZP_05556120.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US]
 gi|293381615|ref|ZP_06627599.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
 gi|227862579|gb|EEJ70074.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           precursor [Lactobacillus crispatus JV-V01]
 gi|256712467|gb|EEU27464.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US]
 gi|290921799|gb|EFD98817.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
          Length = 272

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 10/234 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L       + ++   +K+   +  G+      F       G  +GF++D  +AL+  + 
Sbjct: 19  TLTACGKHASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +K  ++   A  R   L++  +D +      T  R     + F    +  G   ++ 
Sbjct: 79  GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I +V  L G ++    GTT    +  Y          + ++   +  +A +A++  
Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A T D   L  +    + P  + ++  + S +P   A+ +G  +  + +     
Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243


>gi|269926019|ref|YP_003322642.1| extracellular solute-binding protein family 3 [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269789679|gb|ACZ41820.1| extracellular solute-binding protein family 3 [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 307

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 84/243 (34%), Gaps = 12/243 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75
            T+ S+ A  L  I   G+L  G +        V    G   G DVD   AL+ A+    
Sbjct: 58  TTAASSPAPQLKLIND-GYLTVGTDASYPPMESVDPKTGQIVGADVDLANALAKAMGLKG 116

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K+  +  +      ALQ  + DI+  + + T  R     + F         G ++    
Sbjct: 117 AKM--VNNSFDTIIAALQRGKFDIIMSSMNDTPER--RQQVDFVD-YMTASIGIVVPSDS 171

Query: 136 GI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            I   S   L G +I VQ GT     L    +    K     F +  +   A  +   D 
Sbjct: 172 NIKADSYKDLCGYTISVQRGTVELDELQKVNEQCTKKMTLKTFTQDTDAWQALVSGHVDV 231

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           YT D+          + PS+  +  +  S       A+ +   +  + ++     +  + 
Sbjct: 232 YTSDLPVTA--FHIKENPSKFKLAGEPFSAGQNYGIAVPKNRQDLKDALAKALEQIRASG 289

Query: 253 ELG 255
           E  
Sbjct: 290 EYD 292


>gi|262204220|ref|YP_003275428.1| extracellular solute-binding protein family 3 protein [Gordonia
           bronchialis DSM 43247]
 gi|262087567|gb|ACY23535.1| extracellular solute-binding protein family 3 [Gordonia bronchialis
           DSM 43247]
          Length = 340

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 10/221 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            + DI   G L  G++ G   F+      GD +GFDVD  R ++ AIF DP ++++  L+
Sbjct: 96  TMADIVAHGRLIVGLDIGSNLFSFRDPMTGDIRGFDVDLSREITRAIFGDPGRVEFRVLS 155

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           + ER  AL++  +D++ +    T   +    ++F    Y   Q  +  +   I+  +QL+
Sbjct: 156 SAERVEALRTGAVDVVVKTMSITC--DRLRDISFSAPYYVASQRILAVQNSAITGPAQLA 213

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +C   G T+   +             +      +     +  + DA T D + L  L
Sbjct: 214 GKRVCSARGATSIGRIQSIAPQA----RMVTTTTWADCLVLLQQGQVDAVTTDDAILAGL 269

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 P   V+ P +         I  G  +    ++   
Sbjct: 270 AEQ--DPWVRVVGPSLGE-EYYGVGIPPGRDDMVRFINGVL 307


>gi|261753610|ref|ZP_05997319.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|261743363|gb|EEY31289.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
          Length = 256

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  +++         A      K+   ++         F  +  +G   GFD
Sbjct: 1   MKSLVLAGLASVVLTVSIQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +      +LQ+ + D +  +   T  R+  +   F  
Sbjct: 55  LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 109

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227

Query: 239 NIVSWTHY 246
              +    
Sbjct: 228 EQFNAAIK 235


>gi|256844627|ref|ZP_05550112.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN]
 gi|256613168|gb|EEU18372.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN]
          Length = 272

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 10/234 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L       + ++   +K+   +  G+      F       G  +GF++D  +AL+  + 
Sbjct: 19  TLTACGKHASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +K  ++   A  R   L++  +D +      T  R     + F    +  G   ++ 
Sbjct: 79  GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I +V  L G ++    GTT    +  Y          + ++   +  +A +A++  
Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A T D   L  +    + P  + ++  + S +P   A+ +G  +  + +     
Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243


>gi|328882495|emb|CCA55734.1| amino acid ABC transporter solute-binding protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 350

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 77/243 (31%), Gaps = 17/243 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFD 73
              T  + +   +  IK+RG L  G++     +          +GFD+D  RA++  I  
Sbjct: 81  ASLTPSTADGPSIAAIKQRGKLVVGVDQSSYRWGYRNPETRSLEGFDIDLARAIAKDILG 140

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
               + +  +   +R  AL S ++D++ R       R     +AF    +  GQ  +  K
Sbjct: 141 SEDAVIFRAIPTNQRIAALDSGKVDLVVRTMTINCKR--IQQVAFSTAYFQAGQQVLAPK 198

Query: 134 KKGISSVSQ--LSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEI 182
                +     L+G  +C   G+T    L          D           +      + 
Sbjct: 199 LAQDITGYDASLNGKRVCTAEGSTAYEALEEKSFGAVFKDEGDGTKDDKDLLTVPNQLDC 258

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A  +  + DA   D +        +       +     +      A   G+ +    V+
Sbjct: 259 LARLQLGQVDAVVTDNALAAGQAAQDP---AVELKGRPFTTEFYGVAAKLGNDDLVRRVN 315

Query: 243 WTH 245
              
Sbjct: 316 QVL 318


>gi|284032614|ref|YP_003382545.1| extracellular solute-binding protein family 3 protein [Kribbella
           flavida DSM 17836]
 gi|283811907|gb|ADB33746.1| extracellular solute-binding protein family 3 [Kribbella flavida
           DSM 17836]
          Length = 307

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 8/229 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           ++    IK RG    G+           ANG   GFD++  R +S+ +  DP KI+Y  +
Sbjct: 58  SATFAKIKARGNAVVGVKADQPNLGYKDANGKRCGFDIEIARMVSAQLGFDPEKIEYKEI 117

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVS 141
            +  R  A+   +ID        T  R+    ++F    +  GQ  ++ K      +   
Sbjct: 118 PSANRETAIAGGEIDYYVGTYSITDKRKKL--VSFAGPYFIAGQDLLVRKDDTSMDAGKD 175

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  +C   G+T    + D  +      +   F+   E  +    ++ DA T D + L
Sbjct: 176 GLKGKKVCSATGSTPIQKVKD--EGLTEPNNISEFKTYSECVSQLLDNKTDAVTTDDAIL 233

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    P E  ++    S       +   D    + V+    A  T
Sbjct: 234 KGYAANA--PDELRVVGKPFSTEKYGIGLPLADKALRDKVNAGLEASFT 280


>gi|160933931|ref|ZP_02081318.1| hypothetical protein CLOLEP_02793 [Clostridium leptum DSM 753]
 gi|156866604|gb|EDO59976.1| hypothetical protein CLOLEP_02793 [Clostridium leptum DSM 753]
          Length = 293

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 16/239 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
             ++ +T+      ++  G L  G++             GD  GFD+D  + + S +  +
Sbjct: 37  SSSAAATDDQSWEKVESAGTLVLGLDDAFPPMGYKDTETGDIIGFDIDIAKEVCSRLGIE 96

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++  P++   +   L++  +D L      T  R+    L        + Q  ++   
Sbjct: 97  ---LKLQPIDWNNKQSELENGNVDCLWNGFSKTPERDEQFNL--SIPYMKNEQIILVKTD 151

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCD 192
               ++  L+G +I VQA ++ E  L         +     +  E         +    D
Sbjct: 152 SDYQTLEDLAGKTIGVQADSSAESALEAEENKEFKDSLGEIVKIEDYAMAVLEIQNGTID 211

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDII------SKSPLAPAIIQGDTEWYNIVSWTH 245
           A + D   + A    N+ P  + IL D        +         + D      V    
Sbjct: 212 AISIDE--VVARFYLNNDPDAYRILSDSDGNALSLATEDYVIGFRKSDNALKEKVEEAL 268


>gi|119383776|ref|YP_914832.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119373543|gb|ABL69136.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 281

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +  + LF      +A  L DI   G L+CG+           A+G+  GFDV+ C  +++
Sbjct: 23  IAALPLFLVGTPASADKLDDIVSSGALRCGVMLDFPPLGYRDASGNPAGFDVETCNDIAT 82

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +   P  ++     A +R  AL S  +DI+   T  TL R  +  + F           
Sbjct: 83  QLGVKPEIVE---TQAPQRVPALVSGTVDIVVGGTTPTLERAKT--VTFTDPYNVGKLVV 137

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +      IS   +L G S+ +  GT  E          +     +      E   A R  
Sbjct: 138 VTGSANKISGFDELKGKSVALVRGTLPETAYLAACNGWSEGCKNLSLANNAEQITAVRQG 197

Query: 190 RCDAYTGDISALYALKLT 207
           R +A     S + ALK +
Sbjct: 198 RANAMIETNSFMSALKAS 215


>gi|322373402|ref|ZP_08047938.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C150]
 gi|321278444|gb|EFX55513.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C150]
          Length = 265

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 72/261 (27%), Gaps = 15/261 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW 56
           M K  F ++ L    +      +       IK +  +     +    F            
Sbjct: 1   MKKFWFVLTALVATCVLVACSGSQGVKPQTIKDKKKIVVATESEFAPFEFKTLINGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+   +      +++  ++      ++QS + DI       T  R+     
Sbjct: 61  VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTNERKKV--Y 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +S   L+  ++  Q G+  E                +
Sbjct: 116 DFSDSYYTAENVVIVKKDKVNDFTSTDSLAKQTVGTQKGSVQETVAKKQIPKA----SVV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    ++ +  A   + +        ND  +              A A  +G 
Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYISQNDDLTLANFNLKSDGSDAYAVATRKGS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
                 ++        + +  
Sbjct: 232 DALLKEINAVIKETKNSGKFD 252


>gi|306831675|ref|ZP_07464832.1| exopolyphosphatase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304426100|gb|EFM29215.1| exopolyphosphatase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 273

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 93/281 (33%), Gaps = 18/281 (6%)

Query: 1   MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           M  K  F+ +L L   + L     S+N ++   I K+G L   I+     F     V   
Sbjct: 1   MKIKKIFLGVLALISVLTLAACGSSSNENLQEKIVKKGKLVVAISPDYAPFEFKALVNGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G DV+  +A++  +  +   ++   ++      +LQ+ + D+      +T  R   
Sbjct: 61  DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      ++        +SV  LSG  + VQ GT  E    D         
Sbjct: 118 --YNFSDAYYETENAILVKASDVDTYTSVDSLSGLKVAVQKGTIEENLAKDQL----SDS 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +    + E     ++ +  A   +          N   +      +       A A+ 
Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           +   E    V+     +   ++      +  Q++ D  + D
Sbjct: 232 KDSGELVKTVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272


>gi|86360224|ref|YP_472113.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86284326|gb|ABC93386.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 278

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 87/251 (34%), Gaps = 13/251 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
           +S+         +    A  L  I     L+C     +  FA       +  GFDVD C 
Sbjct: 6   LSLTVAFAGMAAAVPAKADQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCG 65

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +          P++ + R   ++  ++DI   N  +TL R   +   F    Y  
Sbjct: 66  AIAKELGVKAE---IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLA 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            +  I+       S +  +G  I    G+T+E+++         K  P+ F+       A
Sbjct: 121 KEMLIVPADDAGKSKADYAGQRIASTKGSTSEMSI------KLNKSEPLTFQDTASAYLA 174

Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            +  +      +          +  +  E  ++ + +   P+   + +   +    ++  
Sbjct: 175 VQQGKARGMVANTMTTTKFVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPKLTAKINEI 234

Query: 245 HYAMVTAEELG 255
            + +  + E+ 
Sbjct: 235 LHKLDASGEIN 245


>gi|322833412|ref|YP_004213439.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321168613|gb|ADW74312.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 280

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 85/235 (36%), Gaps = 13/235 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74
                S  A +L DI+ RG L C + + +  F+          G DVD C AL+  +   
Sbjct: 17  MAAFSSAKADVLSDIQARGSLNCAVYSDVPPFSSPDPKTRQLAGMDVDLCTALAKQMGVK 76

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              +  +P + + R   + + + D+L  N  +T  R     + F    Y   +  ++ K 
Sbjct: 77  ---LNLMPTSIEARIAVIATGRADVLIANLAYTKTR--GQQIQFSDPYYVAKEVLVVKKP 131

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
               + +   G  I    GTT+E ++      +      + F+       A   ++   +
Sbjct: 132 NVDKTRADFKGKRISATKGTTSEQSI------YLAGAKAVTFQDAASAFLALEQNKAVGF 185

Query: 195 TGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +      +         E  ++ + ++  P+   + + +      V+ +  AM
Sbjct: 186 VTNTMTAIKMISQAGKDGIELGMIKEPMALEPIGVGMKKDEPALLAKVNSSLKAM 240


>gi|229093214|ref|ZP_04224332.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-42]
 gi|228690188|gb|EEL43982.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-42]
          Length = 259

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSIFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|227820464|ref|YP_002824435.1| substrate-binding component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227339463|gb|ACP23682.1| putative substrate-binding component of ABC transporter
           [Sinorhizobium fredii NGR234]
          Length = 267

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           ++    A+ L DI  RG ++ G+ TG      V   G+  G+DVD    ++         
Sbjct: 23  SAVEAQAATLNDIISRGTVRIGVLTGAPPMGMVDEQGNPTGYDVDVANLIA---GYLSLP 79

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
            + +PL    R  ALQ+ ++D L      T  R  +  + F           I    +  
Sbjct: 80  GELVPLTPPARIPALQTGKVDFLVATLAPTGERAKT--VMFTQPYSAFNMDIISGPDQKF 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + ++ L G  + V  G++ E  L    KA       +V+E       A  A + DA    
Sbjct: 138 AKLADLEGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTSAQALIAGQVDAVAL- 193

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +     +   RP   + +     +   + A    D E    ++   Y M  + +L 
Sbjct: 194 -PSTVGEAIIKQRPDAGLQVGFTFFQQGNSMATRMEDFEIRQWLNTAIYLMKISGDLD 250


>gi|228960422|ref|ZP_04122074.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229111628|ref|ZP_04241179.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock1-15]
 gi|229146728|ref|ZP_04275094.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-ST24]
 gi|296504644|ref|YP_003666344.1| arginine-binding protein [Bacillus thuringiensis BMB171]
 gi|228636748|gb|EEK93212.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-ST24]
 gi|228672010|gb|EEL27303.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock1-15]
 gi|228799283|gb|EEM46248.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|296325696|gb|ADH08624.1| arginine-binding protein [Bacillus thuringiensis BMB171]
          Length = 259

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + V + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGVEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|307243546|ref|ZP_07525694.1| bacterial extracellular solute-binding protein, family 3
           [Peptostreptococcus stomatis DSM 17678]
 gi|306493102|gb|EFM65107.1| bacterial extracellular solute-binding protein, family 3
           [Peptostreptococcus stomatis DSM 17678]
          Length = 266

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 82/256 (32%), Gaps = 14/256 (5%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKANG 54
           M K       +L L ++  T     +    D K     +  +  G++   V    +    
Sbjct: 1   MKKGIIKKTVMLGLGLVLATGLVACSDKKDDQKATSTDKKEIVMGLDNTFVPMGFLNDKN 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +GFD+D               +++  ++   +  AL +  +D L      T  R+  +
Sbjct: 61  ELEGFDIDLANEAFKRAGY---TVKFQNIDWSMKEQALDNGNVDCLWNGYSITEERKARV 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYH 172
              F    + + Q  I    +  + ++ L    +  QA ++    +    +   M     
Sbjct: 118 A--FSKPYFDNKQIAITMSTESPTKLADLKDQVVGTQAASSALEAIEANKEFIGMIKDQK 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+ ++  ++        R  +  GD   L           ++ +L   +          +
Sbjct: 176 PVTYDTYDKALRDLEIGRIKSVVGDEVLLKYYITQ-RGADKYKVLEGDLGSEQYGVGFRK 234

Query: 233 GDTEWYNIVSWTHYAM 248
            DT+  + +      M
Sbjct: 235 KDTDLRDKIDKALDDM 250


>gi|300714972|ref|YP_003739775.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand
           binding protein [Erwinia billingiae Eb661]
 gi|299060808|emb|CAX57915.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand
           binding protein [Erwinia billingiae Eb661]
          Length = 259

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++ L     T+F+  +           L+ G++     F     +G  +GFD
Sbjct: 1   MKKIALSALVLLACASSTAFAAES-----------LRFGVDPTFPPFESKAPDGSLQGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+   +     K  ++         ALQ+++ D +      T  R     +AF  
Sbjct: 50  IEMGNAICHQM---KVKCVWVQTGYDGIIPALQARKFDAILSAMAMTDKR--RQQVAFTD 104

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      +  K  G+      L G S+ V  GTT E      +       + + +   
Sbjct: 105 MLYNTPSALVTKKDSGLKPDAESLKGKSVGVAQGTTQETYAKAVWA--GTGINVVSYPNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           EEI     + R DA     ++     L + +  ++ I  D +             + + D
Sbjct: 163 EEIWPDLASGRVDATLTSAASAETGFLKSPQGKDYQISGDTLYDKKYFGEGVGIGLRKDD 222

Query: 235 TEWYNIVSWTH 245
                 ++   
Sbjct: 223 RARVEKINAAL 233


>gi|270489688|ref|ZP_06206762.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis
           KIM D27]
 gi|270338192|gb|EFA48969.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis
           KIM D27]
          Length = 259

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 6/212 (2%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQ 93
            G     V F+         G+  D+   +  AI  +      +++ +P+ ++ R   LQ
Sbjct: 1   MGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPLLQ 60

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           +   D    +T   L R      AF    +  G   +  K   +     L+G ++ V +G
Sbjct: 61  NGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTSG 118

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT+E+ L    +  NM    I  +   +      + R  A+  D + L   +    +P E
Sbjct: 119 TTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDE 178

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             I+    S+      + + D  +  ++  T 
Sbjct: 179 WSIVGTPQSEEAYGCMMRKNDPAFKALLDKTI 210


>gi|229098624|ref|ZP_04229564.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-29]
 gi|229117650|ref|ZP_04247021.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock1-3]
 gi|228665829|gb|EEL21300.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock1-3]
 gi|228684703|gb|EEL38641.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock3-29]
          Length = 259

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N  +  +   +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGDVKEEKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDIDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++ K  + K      +R
Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEFKKQVDFKAEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAILEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|89899769|ref|YP_522240.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89344506|gb|ABD68709.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 280

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 93/246 (37%), Gaps = 4/246 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +  +   S L  +  RG L  G  +    +    A+   +GFD+D  + +S A+FD+P
Sbjct: 19  GASVNAAGTSKLDQVLARGKLIVGTGSTNAPWHFKSADNKLQGFDIDIAKIISKALFDNP 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            KI+++  ++  R   + + ++DI  +    T  R  +  +AF    + +G G +     
Sbjct: 79  DKIEFVNQSSDARIPNITTDKVDITCQFLTVTGGR--AQQVAFTIPYFREGVGLMTKTGS 136

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
                + L  A   V       +       A         ++  + +  A  + R DA  
Sbjct: 137 KRGDYAALKAAGASVNVAVLQNVYAESMVHAALPMAKVAQYDSPDLMYQALNSGRADAAA 196

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S++         P ++       +    A A+ +GD +W N V+   +  +T  E  
Sbjct: 197 TDQSSI--SWFIKQNPGKYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFD 254

Query: 256 ITQKNI 261
               + 
Sbjct: 255 AYAASY 260


>gi|38234609|ref|NP_940376.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129]
 gi|38200873|emb|CAE50578.1| Putative ABC transpoter membrane protein [Corynebacterium
           diphtheriae]
          Length = 315

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 11/220 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              S   N   +  +++RG+L  GI+      +    +G+ KGF+VD  R ++  IF +P
Sbjct: 57  LLGSLRPNGDDVPQVRQRGYLIVGIDQSQNLLSFRDTDGELKGFEVDLAREVARDIFGEP 116

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            KI +  +++     AL+  Q+D++ R+   T  RE    + F    +      +  K  
Sbjct: 117 -KIDFRYVDSSSWVKALEDGQVDMVLRSISVT--RERQDQVFFSTPYFSGKTRILTQKDS 173

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I   + L G ++CV   +T    L             +      +   A + +  DA  
Sbjct: 174 DIHGAADLKG-TVCVTNLSTGSKRLGAIAP----NSTMLAVRNSADCLLALQQNHADAVI 228

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            D + L  +      P  H I+ D I+    A A  +  T
Sbjct: 229 SDDAILSGMIAQ--DPFTH-IVGDPIATEQYAVAFAKPRT 265


>gi|291518760|emb|CBK73981.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 298

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 99/272 (36%), Gaps = 40/272 (14%)

Query: 1   MYKDF------FVSILCLIILFFTSFSTNAS----------------------ILGDIKK 32
           M K+F         +  L +  FT+   +AS                       L +IK+
Sbjct: 1   MKKNFINKVTGLTLVGALAVSGFTACGASASSSDVAGTDEATVESASSAAGYRTLDEIKE 60

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G +  G+ +    F  V  NG++ G+DV F   +   +      I Y+   A  R   L
Sbjct: 61  SGTINIGVFSDKSPFGFVDENGEYAGYDVYFAERIGEDLGVK---INYVSTEAANRIEYL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQ 151
           Q+ ++DI+  N   T  R  +  + F         G +      + S+  L +   I V 
Sbjct: 118 QTGKVDIILANFTVTEER--AQEVDFALPYMNVALGVVSPDSAVVESLDDLGADDQIIVI 175

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +GTT E  L      +        ++   E   A+      A+  D + + A   + +  
Sbjct: 176 SGTTAETYLT----KNYPDIKLQKYDAYAEAKTAFENGTGVAWANDNTEVIA--FSLENE 229

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              V +P +  +  +APA+ +G+      ++ 
Sbjct: 230 GYTVGIPSLGDQDTIAPAVTKGNDTLLKWLNE 261


>gi|300870610|ref|YP_003785481.1| polar amino acid uptake ABC transporter amino acid-binding protein
           [Brachyspira pilosicoli 95/1000]
 gi|283462655|gb|ADB22528.1| oligopeptide-binding protein 6 [Brachyspira pilosicoli]
 gi|300688309|gb|ADK30980.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Brachyspira pilosicoli 95/1000]
          Length = 271

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 79/234 (33%), Gaps = 8/234 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + S   + L  +K+ G L  G++            G+  GFD+D  + +++ +  + 
Sbjct: 23  ASQASSAADNSLQKVKESGKLVLGLDDTFAPMGFRDEEGNIVGFDIDLAKEVANRLGVEL 82

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134
                 P++     L+L+   +D++         R+    + F      +    + +  +
Sbjct: 83  VA---KPVDWSSVVLSLKKGDVDVVWNGFAINETRKE--QVNFTKPYLNNRLMIVKNADR 137

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I +   L G  + VQ G++   +L               ++          A R DA 
Sbjct: 138 DDIKTKDDLKGKILGVQTGSSNYESLEAD-PISKETKEIRQYDIYANAFLDLEAKRIDAV 196

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             D   +    ++ +     ++    I+       + + DTE  N +      M
Sbjct: 197 IVDE-IVARYYISKENADFELLEEYPITAKSFGVGVRKTDTELLNAIDKALDDM 249


>gi|282864976|ref|ZP_06274030.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
 gi|282560401|gb|EFB65949.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
          Length = 304

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 10/227 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +       +RG+L  G         E    +G + GFD++  R +++++  +P KI++  
Sbjct: 53  SPTWRKAHRRGYLVVGAKEDQPYLGEKDPASGVYSGFDIEIARMMAASLGFEPKKIRFRT 112

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141
           + +  R  ALQ+ QID          +R+  +G  F    Y  GQG ++      I    
Sbjct: 113 IASANRETALQNGQIDYYVGTYTINDMRKKIVG--FAGPYYMAGQGLLVRTDENDIHGPQ 170

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G ++C  AG+T    +A  +         + ++            + DA T D + L
Sbjct: 171 DLAGKTVCSAAGSTPYQRIAADYPKAK----LVAYDTYSICVDNLLTFQVDAVTTDDAIL 226

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                    P E  ++    S+ P    + + D      +     A 
Sbjct: 227 LGFAAKA--PDEMKVVGKPFSEEPYGIGVPRSDNALRLALDDALEAN 271


>gi|16759748|ref|NP_455365.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16764192|ref|NP_459807.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142479|ref|NP_805821.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|161614918|ref|YP_001588883.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167550477|ref|ZP_02344234.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|167992066|ref|ZP_02573164.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168230732|ref|ZP_02655790.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168236762|ref|ZP_02661820.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168240698|ref|ZP_02665630.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168466431|ref|ZP_02700293.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168820020|ref|ZP_02832020.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194442423|ref|YP_002040066.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194450493|ref|YP_002044858.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194470062|ref|ZP_03076046.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194738210|ref|YP_002113921.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197248579|ref|YP_002145786.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197264430|ref|ZP_03164504.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|200390987|ref|ZP_03217598.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204929924|ref|ZP_03220945.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|207856266|ref|YP_002242917.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213163837|ref|ZP_03349547.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213423458|ref|ZP_03356440.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213424777|ref|ZP_03357527.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213649899|ref|ZP_03379952.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213859569|ref|ZP_03385273.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|238913896|ref|ZP_04657733.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|25296351|pir||AC0601 glutamine-binding periplasmic protein precursor [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|1649035|gb|AAB49427.1| high-affinity periplasmic glutamine binding protein [Salmonella
           enterica subsp. enterica serovar Typhimurium]
 gi|16419336|gb|AAL19766.1| glutamine high-affinity transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502041|emb|CAD05277.1| glutamine-binding periplasmic protein precursor [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138110|gb|AAO69681.1| glutamine-binding periplasmic protein precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|161364282|gb|ABX68050.1| hypothetical protein SPAB_02672 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401086|gb|ACF61308.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194408797|gb|ACF69016.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194456426|gb|EDX45265.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194713712|gb|ACF92933.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195630984|gb|EDX49570.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197212282|gb|ACH49679.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197242685|gb|EDY25305.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197290080|gb|EDY29437.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199603432|gb|EDZ01978.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204320918|gb|EDZ06119.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205324505|gb|EDZ12344.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205329625|gb|EDZ16389.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334678|gb|EDZ21442.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205340418|gb|EDZ27182.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205343029|gb|EDZ29793.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|206708069|emb|CAR32360.1| glutamine-binding periplasmic protein precursor [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|267992576|gb|ACY87461.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157414|emb|CBW16903.1| glutamine-binding periplasmic protein precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911853|dbj|BAJ35827.1| glutamine ABC transporter substrate binding protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320085103|emb|CBY94890.1| Membrane-bound lytic murein transglycosylase F Murein lyase F;
           Flags: Precursor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226403|gb|EFX51454.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322616305|gb|EFY13214.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619555|gb|EFY16430.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622749|gb|EFY19594.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628661|gb|EFY25448.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631598|gb|EFY28354.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637125|gb|EFY33828.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641675|gb|EFY38311.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644530|gb|EFY41070.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648464|gb|EFY44916.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654199|gb|EFY50522.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658114|gb|EFY54381.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663588|gb|EFY59790.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670324|gb|EFY66464.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671560|gb|EFY67682.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676916|gb|EFY72983.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682841|gb|EFY78860.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686520|gb|EFY82502.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323129136|gb|ADX16566.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323194583|gb|EFZ79776.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199086|gb|EFZ84182.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202041|gb|EFZ87100.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208933|gb|EFZ93870.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213918|gb|EFZ98688.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215230|gb|EFZ99975.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323220850|gb|EGA05288.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323227290|gb|EGA11458.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229908|gb|EGA14031.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233133|gb|EGA17229.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240868|gb|EGA24910.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243185|gb|EGA27205.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248724|gb|EGA32652.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251728|gb|EGA35595.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257540|gb|EGA41228.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261457|gb|EGA45038.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267888|gb|EGA51367.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272045|gb|EGA55460.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 248

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  E    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|300313169|ref|YP_003777261.1| amino acid transport periplasmic protein [Herbaspirillum
           seropedicae SmR1]
 gi|300075954|gb|ADJ65353.1| ABC-type amino acid transport periplasmic component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 268

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 13/252 (5%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K       +   ++ L   + + +A  L DIK R  +   I+ G   F    A  + +
Sbjct: 1   MKKLLSFTRKAAAVVLGLACFAQAAHADALADIKARKKVLVAIDLGAPPFGMTNAKLEPQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  R L+  +  +   ++ + +    R   L + + D++  +   T  R+  +   
Sbjct: 61  GSDVETARLLAKDLGVE---LEIVQVTGPNRIPFLMTGKADMVISSFSITPERQKVVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F              K + I S++ L G  + V  G   +  L           + + F+
Sbjct: 116 FTQPYGASQFVVAAPKGENIKSLNDLVGKRVAVVRGNMQDSLLTPIAPK---GTNIVRFD 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               + AA  + + DA     S   A  +    PS+++     I   P A  + +G+   
Sbjct: 173 DDATVTAAIISGQVDALCTPNSL--ASAIAKQNPSKNLETKFAIKDIPYAIGLRKGEPAL 230

Query: 238 YNIVSWTHYAMV 249
              ++    A +
Sbjct: 231 EKWLNEWISANL 242


>gi|304438667|ref|ZP_07398605.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368316|gb|EFM22003.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 268

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 14/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M     ++   ++       +   S        +  + G +  G++           N  
Sbjct: 1   MNWKAILTGATVLACSAALLAGCGSTEKVPSTDNAAEMGKIIVGLDDNFPPMGFKDENNK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDVD     +  +  +   +++  ++   +   L+S ++ +L    D T  R+    
Sbjct: 61  IVGFDVDLAEEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQVLWNGLDITEKRKE--S 115

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F      + Q   + K    ++    L+G ++  Q+  T E  +              
Sbjct: 116 MLFSKPYMDNHQIIFVKKGNTAVTDEKSLAGKTVGTQSAGTVEEYMDASDFYKKEVKEVK 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQG 233
            +             R DA  GD   +      +  P     L  ++   S    A  + 
Sbjct: 176 KYPDYVAAFMDLENGRLDAVIGDE--IVGRYYMSKHPDTLDALDVVVGPVSEFGIAFAKD 233

Query: 234 DTEWYNIVSWTHYAM 248
           +T+  + V      M
Sbjct: 234 NTKLRDEVQKVLDEM 248


>gi|330000991|ref|ZP_08303862.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3]
 gi|328537826|gb|EGF64020.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3]
          Length = 266

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M          +  + ++     S       ++L  IK+RG L+ G+      F+    +
Sbjct: 1   MKLALLGRQAMMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGAIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +   +  +  S+     A+ 
Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNDDLLKAVDGAI 243


>gi|330838525|ref|YP_004413105.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas
           sputigena ATCC 35185]
 gi|329746289|gb|AEB99645.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas
           sputigena ATCC 35185]
          Length = 262

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 74/251 (29%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K  FV + L L   F        +     KK   +  G++        +    +  GF
Sbjct: 1   MKKILFVCLSLMLAAGFMAGCGGQKAANDAPKK---IVIGLDDNFPPMGFLDEKNEITGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  +  +  +  +   +++  ++   +   +QS +ID L    + T  R+    L F 
Sbjct: 58  DVELAKEAAKRLGTE---VEFKGIDWASKEAEIQSGRIDALWNGLEITEERKK--NLLFS 112

Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                D Q          I+    L    +  Q+ + T     D  K          +  
Sbjct: 113 EPYMNDQQVIFKRANDASIAKEDDLKDKIVATQSASGTAEDYVDGHKDVTGYKDVKKYAD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEW 237
                      R DA   D          +  P +   L   +   +    A  + DT  
Sbjct: 173 YLSAFMDLENGRVDAIVCDEII--GRYYMSKHPDKIAALDGHVGPVTQFGVAYRKDDTAL 230

Query: 238 YNIVSWTHYAM 248
              +      M
Sbjct: 231 KEKMQKVLDEM 241


>gi|241895820|ref|ZP_04783116.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
 gi|241870863|gb|EER74614.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
          Length = 282

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 87/253 (34%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVK-ANG 54
           M      + + L          +A  +       I K   +  G+         +    G
Sbjct: 9   MKSILAAAAVTLFAGATEGTVIHADTVKNQTYDRIMKTDRMNWGVKGDTKLMGLMNIKTG 68

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             +GFDVD  + ++  I +  +K++Y  + +  R   L +  ID +      T  R+   
Sbjct: 69  KLEGFDVDMAKEITKRI-NPKAKVEYTQITSGTRVPMLLNGNIDAIIATMSITPDRQKV- 126

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYH 172
            + F    +  GQ  ++ K     +V QL+     V    G+T+   + D+         
Sbjct: 127 -VDFSQSYFNAGQSILVKKSSKYHNVKQLNTPKARVLAVQGSTSIDEIKDFAPKAK---- 181

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +       A +A + DA T D   LY +   +       +     +K P   A+ +
Sbjct: 182 VVGLQDYATALTALKAGQGDALTTDNGILYGMAAGSK---TLEVRGGTFTKEPYGVAMQK 238

Query: 233 GDTEWYNIVSWTH 245
            + +    V+   
Sbjct: 239 QNPKLVKAVNKAI 251


>gi|15807269|ref|NP_295999.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
 gi|6460086|gb|AAF11825.1|AE002060_4 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
          Length = 272

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 89/240 (37%), Gaps = 13/240 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S S  A+ + ++KK+G L  G +     F    ++G  +GFD+D  RA++  +     ++
Sbjct: 33  SCSAGAASVAEVKKKGTLVLGTDPTFAPFEFKGSDGQVQGFDIDIARAVAHDLG---VRL 89

Query: 79  QYLPLNAKERFL-ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           +  P+        A+ S ++D+       T  R     + F    Y   Q FI+      
Sbjct: 90  EIRPVGFGALMPQAVTSGRVDVAMSGITITPERATV--VTFSQPYYRSAQVFIVRSGNPG 147

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
             +  + + G ++ VQA TT +       K         V++      A  R+ R  A  
Sbjct: 148 KFTWPADVKGKTVGVQANTTGQYAAEQTLKPRG--ATIKVYDDFAAGLADVRSGRIAALI 205

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           GD   +  LK     P +      ++          +G ++     + T   +  + E  
Sbjct: 206 GDAPTVNDLKKRL--PGQFDKAGAVLVAEDYGMVFRKG-SDLAAAANRTLARLKRSGEYQ 262


>gi|284929259|ref|YP_003421781.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [cyanobacterium UCYN-A]
 gi|284809703|gb|ADB95400.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [cyanobacterium UCYN-A]
          Length = 261

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 13/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MYK F   I+   ++   +   +AS L +I++R  +   +         + +    +G +
Sbjct: 7   MYKLFLTFIVSFALVLNHNIVLSAS-LEEIRERKKIIIAVKNNTRPLGFLNSKNQLEGLE 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L+  I  D + I +  +N +ER   +   ++DI+         R     + F  
Sbjct: 66  IDLAKQLAKDILGDSNAILFKFVNNQERLQTVIDGEVDIVIARMTIDSFRSRL--INFSS 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y D  G I  K + I   S L  ++I V   + T   +   F   N     +  +  +
Sbjct: 124 YYYLDSTGIITKKHQ-IKDSSDLFNSTIAVINHSDTISVIRSNFPKTN----LVGVDSYQ 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238
           E      + + DA+  D S L           ++  L   +S   L   I +    ++  
Sbjct: 179 EAFKLMESQKVDAFAADNSILTGWIQEYP---QYHTLSLRLSSKSLGIGIPKGLKSSDLR 235

Query: 239 NIVSWTHY 246
           NI++ + Y
Sbjct: 236 NIINQSIY 243


>gi|225621464|ref|YP_002722723.1| family 3 extracellular solute-binding protein [Brachyspira
           hyodysenteriae WA1]
 gi|225216285|gb|ACN85019.1| extracellular solute-binding protein, family 3 [Brachyspira
           hyodysenteriae WA1]
          Length = 269

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 87/243 (35%), Gaps = 17/243 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I+ +  +   S   +A       +   +  GI+     F  + ++G   GFD
Sbjct: 22  MKK-ILTLIMIISSMLIVSCGNSAKTTET--ENKKIYVGIDVDFPPFGYLDSDGKIGGFD 78

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++         +++  +  K    ALQ+K+ID +      T  R+    + F  
Sbjct: 79  YDIMSEVAK---LSGLNVEFTHMQFKGLLPALQAKKIDAIIAGMTVTEERKQF--VNFSE 133

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  ++HK    I +   L+G +I V  GTT +  + +  + +N K     F+  
Sbjct: 134 PYYVSSQVMLVHKDDDTIKTFDDLAGKNIGVVIGTTGDTIMTENKEVNNEK-----FDTG 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +  +  A   D       K       +  ++         A A+ + DT    
Sbjct: 189 AAAVLALKEKKIAAIVFDKEPC---KNFAKYNDDIKLIESDAIVENYAIALRKEDTALLE 245

Query: 240 IVS 242
            ++
Sbjct: 246 KIN 248


>gi|269797366|ref|YP_003311266.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
 gi|269093995|gb|ACZ23986.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
          Length = 270

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 87/270 (32%), Gaps = 17/270 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  + ++ F +     +   + +    +  G++            G+  GFD+
Sbjct: 4   KKMMAVGLAAVSMMAFVTGCGGDTKKANTELPKKVVIGLDDSFPPMGFKDEKGEIVGFDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +     D   +++  ++   +   L+SK+ID L      +  RE    + F   
Sbjct: 64  DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNT 118

Query: 122 TY-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    + +    I   + L+G  + VQ  +T E  L +   +         +    
Sbjct: 119 YMKDKQYVIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQND-PSGKTVKETKSYADFV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239
                    R DA   D     A  L    P ++ I+          A    + DT   +
Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235

Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262
            ++           A   AE+   +  +++
Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGADLD 265


>gi|282849231|ref|ZP_06258616.1| putative lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Veillonella parvula ATCC 17745]
 gi|294793050|ref|ZP_06758196.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Veillonella sp. 6_1_27]
 gi|282580935|gb|EFB86333.1| putative lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Veillonella parvula ATCC 17745]
 gi|294455995|gb|EFG24359.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Veillonella sp. 6_1_27]
          Length = 270

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 87/270 (32%), Gaps = 17/270 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  + ++ F +     +   + +    +  G++            G+  GFD+
Sbjct: 4   KKMMAVGLAAVSMMAFVTGCGGDAKKANTELPKKVVIGLDDSFPPMGFKDEKGEIVGFDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +     D   +++  ++   +   L+SK+ID L      +  RE    + F   
Sbjct: 64  DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNT 118

Query: 122 TY-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    + +    I   + L+G  + VQ  +T E  L +   +         +    
Sbjct: 119 YMKDKQYVIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQND-PSGKTVKETKSYADFV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239
                    R DA   D     A  L    P ++ I+          A    + DT   +
Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235

Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262
            ++           A   AE+   +  +++
Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGADLD 265


>gi|215487125|ref|YP_002329556.1| cystine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215265197|emb|CAS09586.1| cystine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 266

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGMEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|88704217|ref|ZP_01101931.1| Bacterial extracellular solute-binding protein, family 3
           [Congregibacter litoralis KT71]
 gi|88701268|gb|EAQ98373.1| Bacterial extracellular solute-binding protein, family 3
           [Congregibacter litoralis KT71]
          Length = 267

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 13/247 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                 L    L  + ++     L  + K   L  G++            GD  GFDVD 
Sbjct: 6   QLVAGALLAFSLSLSPWALAGDTLDRVVKNKTLVVGMSGDQPPMNMRNRQGDLMGFDVDL 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +AL++A+  D   ++  P+   +   AL   ++D++      T  R      +F     
Sbjct: 66  AKALANAMHAD---LELSPMPFGDLTKALADGKVDMVLSGMAITAERSR--SASFVGPYM 120

Query: 124 FDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             G+  +  +    +  S    ++   +     +T+   + +           +     E
Sbjct: 121 MSGKSILATRTALAEIASGGIAVTEVKLAALKNSTSASFVLEAAP----NATLVEVANYE 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  A   +        D        L N      V L   ++  P   A+   D E+ N+
Sbjct: 177 EAIAMVTSGEVAGMVADAPVCQLQVLRNPDAG-LVTLDKPLTIEPFGIAVSSDDPEFLNL 235

Query: 241 VSWTHYA 247
           V     A
Sbjct: 236 VRNYLRA 242


>gi|89072894|ref|ZP_01159451.1| putative amino acid ABC transporter [Photobacterium sp. SKA34]
 gi|89051416|gb|EAR56871.1| putative amino acid ABC transporter [Photobacterium sp. SKA34]
          Length = 270

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 81/245 (33%), Gaps = 9/245 (3%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F V I  L +L     + +   S L  +K+RG L+ G++T  V +A     G+  G
Sbjct: 1   MKRFFAVLITALTLLLSASHALAAEKSTLEQVKERGTLRVGLST-FVPWAMRDKQGELIG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+         I+++P        AL + + D++      T  R  +L + F
Sbjct: 60  FEVDVAKRLAKDAGVK---IEFIPTAWDGIIPALLAGKFDVIIGGMSITPQR--NLSVLF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  G      K+     +S        V              K +  K     F+ 
Sbjct: 115 TTPYSHSGVQLAASKELAGDKLSIADYNKRSVTLAVRRGAVTVQTAKKYFPKAKLRQFDD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +           A          + L        +   + +S+     AI QGD    
Sbjct: 175 ESQAFQEVLNGNAQAVLASTPKPEQMTLQYKDKL-FLPFKERLSQGSEGFAIRQGDFNLL 233

Query: 239 NIVSW 243
           N  + 
Sbjct: 234 NFFNN 238


>gi|260461007|ref|ZP_05809256.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259033041|gb|EEW34303.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 269

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 8/241 (3%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
             L +        +A  + DI  RG L   I+T    +  + AN    GFD++    +  
Sbjct: 15  FVLALSALLPSIASAQSVEDIISRGKLVVAIDTTTPPYGFLDANLKPTGFDIEVANKMGE 74

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+      ++++ + +  R  AL +KQ+D +      T  R  ++ + +           
Sbjct: 75  ALG---VPVEFVTVTSPGRIPALLTKQVDAVISIFSITPAR--AIQIDYSIPYAGQSAVV 129

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           I  K   I  V+ L G  + +    T E  L       N     + F+    +  A  + 
Sbjct: 130 IAPKSTSIKGVADLVGKKVGL-TRGTGEDGLLTKAAEANPGIEILRFDDYSSLLQAMVSG 188

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           + DA  G       LK              + +       + +G+      ++   +AM 
Sbjct: 189 QIDAMGGGDYGEIYLK-KAQNGDAFEQKYVLKTF-YFGIGVAKGNDNLRQWINTWLFAMK 246

Query: 250 T 250
           T
Sbjct: 247 T 247


>gi|306845740|ref|ZP_07478309.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
 gi|306274061|gb|EFM55888.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
          Length = 257

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L  +  +   +     K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +       LQ+ + D +  +   T  R+  +   F  
Sbjct: 56  LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K     S   S  +G  +  QAGTT      D +          ++  
Sbjct: 111 RYYTTPLAVVVPKDSDSVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228

Query: 239 NIVSWTHY 246
              +    
Sbjct: 229 EQFNAAIK 236


>gi|89897621|ref|YP_521108.1| hypothetical protein DSY4875 [Desulfitobacterium hafniense Y51]
 gi|89337069|dbj|BAE86664.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 269

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 24/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------------GFLKCGINTGLVGFA 48
           M K     I+ ++++   + +                          LK G       F 
Sbjct: 1   MKKSLRNGIIAVVMMGLLALTGCGGNQSQPPANDGANNGANGGEEKVLKIGSAIEYAPFE 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFD+D    ++  +       ++   +      A+   + D +      T 
Sbjct: 61  FMDEKQTPTGFDIDLMNEIAKDLGYTA---KFESSSFDGLVAAIGLGKYDAVISAMTITD 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R     + F    +   Q   + K   I S   L G  + VQ GTT +  + D      
Sbjct: 118 DRAK--SVLFSAPYFESAQIIAVKKGSAIKSEQDLKGKKVGVQQGTTGQFAVED------ 169

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           +   P  F+ + +          +A   D   LY     N    +  I+P    K     
Sbjct: 170 LGIDPRKFDTIGDAINDMMIGGSEAVVADTPTLYYFITQNPN-MDIEIIPSAFEKEYFGI 228

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A    + E  + V+ T  
Sbjct: 229 AFKLDNKELADQVNATLK 246


>gi|329124185|ref|ZP_08252732.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Haemophilus aegyptius ATCC 11116]
 gi|327467610|gb|EGF13108.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Haemophilus aegyptius ATCC 11116]
          Length = 273

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 84/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 17  MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 76

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 77  VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 131

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G      A +          KA       +V + +
Sbjct: 132 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSAQSATS----NWGKDAKAAG--AQILVVDGL 185

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 186 AQSLELIKQGRAEATINDKLAVLDYFKKHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 244

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 245 KFNQVLEAL 253


>gi|301055647|ref|YP_003793858.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis CI]
 gi|300377816|gb|ADK06720.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus biovar anthracis str. CI]
          Length = 259

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVNF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|42783271|ref|NP_980518.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|229174830|ref|ZP_04302350.1| Arginine-binding extracellular protein artP [Bacillus cereus MM3]
 gi|42739199|gb|AAS43126.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|228608498|gb|EEK65800.1| Arginine-binding extracellular protein artP [Bacillus cereus MM3]
          Length = 259

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 26/283 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +                              I +   E  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK--------------ELQGIEIKEAPEEVG 219

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
             ++    +  TAE   + +K          +  V+++ G +K
Sbjct: 220 AAIALPKNSDKTAEFNKVIKK---MQENGEMDKLVKKWFGSEK 259


>gi|311068999|ref|YP_003973922.1| high affinity arginine ABC transporter binding lipoprotein
           [Bacillus atrophaeus 1942]
 gi|310869516|gb|ADP32991.1| high affinity arginine ABC transporter binding lipoprotein
           [Bacillus atrophaeus 1942]
          Length = 255

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 95/255 (37%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    + F   +  +S  G    +  +  G +     F     + +  GFD
Sbjct: 1   MKKWLL--LLVAACITFALSACGSSSSGSADGKKKIIMGTSADYKPFEYKDGD-NIVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL+     +   I+   ++      AL+SKQID++      T  R+    + F  
Sbjct: 58  VDLAKALAKKAGYE---IEVQDMDFNSLITALKSKQIDMVLSGMTPTPERKK--QVDFSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y      +  K  GI S+S L G ++ VQ G+  E    +    ++ K       R+ 
Sbjct: 113 IYYTAHHMIVSKKDSGIDSLSDLKGKTVGVQLGSIQEEKGKELSPDYDFKTEDR--NRIS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++    ++ R DA   +         +N+      I      ++  A A  + D++  + 
Sbjct: 171 DLVQEIKSGRFDAAIIEDMVAEGYFNSNEDLQGFTIPDAKAEEAGSAIAFRK-DSDLTDK 229

Query: 241 VSWTHYAMVTAEELG 255
            +     M    EL 
Sbjct: 230 FNKALKEMKDNGELD 244


>gi|299069322|emb|CBJ40588.1| putative amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 280

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67
           +  L  L   SF   A    +I+K   L+CG    +  FA       +  GFDVD C+AL
Sbjct: 10  LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +       +  PL+ + R   ++  ++D+   N  +TL R   +   F    Y   +
Sbjct: 70  AKHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              +       S +   G  +    G+T+EL++            P+ F+       A +
Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178

Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +      +   +  L   +     E  ++ + +   P+   + +G+      V+    
Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKVIAEPMIYQPIGVGMKKGEPALLAKVNEALL 238

Query: 247 AMVTAEELG 255
           AM  A E+ 
Sbjct: 239 AMDKAGEIN 247


>gi|299531960|ref|ZP_07045360.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni S44]
 gi|298720135|gb|EFI61092.1| amino-acid ABC transporter binding protein ybeJ precursor
           [Comamonas testosteroni S44]
          Length = 320

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 24/275 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------------TNASILGDIKKRGFLKCGI 40
           M   +      L+       +                    + +  L   +  G +  G+
Sbjct: 3   MSLKWVGLAAALVCAGSAMAAGKTEAASSNIGSGIDTAVDLSASPTLQRWQAGGTVVLGV 62

Query: 41  NTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
               V  +  + AN  + G+ +D C  +  AI    ++++Y+ L  +     + +   D 
Sbjct: 63  REAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLKYMVLTPQNTMPLINNGTADF 121

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
              +    L R+  +   F   TY       +    GI+S  QL G ++    GTT    
Sbjct: 122 NCASMTNNLTRQKQVA--FGLTTYVSEVRMAVRVDSGITSFKQLQGRNVGAITGTTAVQI 179

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L  Y   + + +  ++ +   E      + R DA+  D + L  +   +  P  + I+ +
Sbjct: 180 LRKYASDNELNFKTLMSKDQFESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIVGE 239

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           +I   P+A    + D +    V      M+ + EL
Sbjct: 240 VIGAEPIAIQFSKDDPQIKKAVDGAILQMIRSGEL 274


>gi|229542707|ref|ZP_04431767.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
 gi|229327127|gb|EEN92802.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
          Length = 255

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +   ++   +     S   + KK   L  G +     F      G+  GFD
Sbjct: 1   MKKIVLGIAIVFSMVIAAACGQTNSSKSNTKKEKTLIMGTSADFAPFETRDTAGNVVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  + ++  +      ++   +       ALQS ++D++      T  R     + F  
Sbjct: 61  ADLAKYIAKELGYK---LEIKDMKFDGLIGALQSHRVDMVLSGMSATKERAK--NVDFST 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G+ F+  K   + ++  L G ++ VQ GT  E             +     +   
Sbjct: 116 PYHHSGEMFVTLKGSPVKTLDDLKGKTVGVQLGTIQEEGADKL--KGKYNFTVKKLDNST 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239
            +     + R      D S          +    V   D  S SP +A A+ +G ++   
Sbjct: 174 NLIEELLSKRIQVAYLDKSVAEGYI----KKQNLVGFDDPTSSSPGMAVALPKG-SKLTA 228

Query: 240 IVSWTH 245
            V+   
Sbjct: 229 KVNKVL 234


>gi|299822124|ref|ZP_07054010.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299815653|gb|EFI82891.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 487

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 95/279 (34%), Gaps = 23/279 (8%)

Query: 1   MYK----DFFVSILCLIILFFTS--FSTNASI---LGDIKKRGFLKCGINTGLVGFAE-- 49
           M K      F+++         S   ++ A     L  I+K G L+ G++     +    
Sbjct: 1   MTKGKSTKLFIALAIFFTFLIPSIHAASAAETDPYLKKIQKNGELRVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +K      GFD+     ++  +   P       +N +    AL++ +ID++      T 
Sbjct: 61  TIKGKDKIVGFDISIADKIAKDLKVKP---VITEMNFESLLGALKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            RE    + F        Q  I+ K  +    S S   G  +  Q  TT E    +    
Sbjct: 118 EREK--EVDFSDTYMRVDQKVIVRKVDQNKFKSTSDFQGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  +  ++V +I     +++ DA   +     A    N   +    +     +   
Sbjct: 174 --SGSTVMSLQKVPDIILNLTSNKIDAAVLEGPVADAYVSQNKALAYAKNVKFANGQKDT 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T   + V+ +   +  +  L   Q   N+  
Sbjct: 232 AIALPKGSTALQDKVNASIKDIKDSGALKKYQATANKQM 270


>gi|255994315|ref|ZP_05427450.1| glutamine ABC transporter, permease/substrate-binding protein
           [Eubacterium saphenum ATCC 49989]
 gi|255993028|gb|EEU03117.1| glutamine ABC transporter, permease/substrate-binding protein
           [Eubacterium saphenum ATCC 49989]
          Length = 259

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 7/254 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    ++  +  L FT          + K    L          F     +G+  GFD+
Sbjct: 6   KKVLIFTLAIVTALSFTGCGKKDDSSSE-KSAKKLVVATEPTFPPFDTTNKDGELDGFDM 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A++     D   I++          AL++   DI++   +     E    + F   
Sbjct: 65  DLMKAIAKDQNLD---IEFKSFEFDALIPALKAGNADIVAAGMNSNDG-ERKKQVDFSKT 120

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               G   ++ K   I S+              T+   L +  K        +  ++ + 
Sbjct: 121 YCDAGLVVMVKKDSKIKSIKDFKSNMKVASQTGTSGGKLIEKLKKQGKIADAVSMKKFDA 180

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                     +A   D     A      +P +  I+   ++    A A+ +G+ +    +
Sbjct: 181 CVLQLINGDVEAVIIDKPVGEAYLA--KKPGKTKIVGKTMNAEAYAFAVKKGNKDLLEKL 238

Query: 242 SWTHYAMVTAEELG 255
           +    A+  + E  
Sbjct: 239 NKGFEAIKKSGEFD 252


>gi|83718424|ref|YP_442093.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|167580939|ref|ZP_02373813.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis TXDOH]
 gi|167619034|ref|ZP_02387665.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis Bt4]
 gi|257138279|ref|ZP_05586541.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|83652249|gb|ABC36312.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
          Length = 266

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 80/250 (32%), Gaps = 16/250 (6%)

Query: 1   MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   K  F S L   +L   T+ +  A +L  +K+ G LK  +      F    A+G  +
Sbjct: 1   MKAFKPMFTSALVAALLGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNADGQLE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  + +++ +   P   Q++          LQ+ + D++      T  R     L 
Sbjct: 61  GFDVDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPAR--RQALD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F     +     I          +   L G  I V  GT      AD  K          
Sbjct: 116 FSQPYVYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGT----NFADLAKTLQ-GVDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R D    D   L  L      P           ++ +     +G+ 
Sbjct: 171 YPGAPEKLRDVAAGRIDVSMDDRLMLPYLIKNAHMPLR-PGATIKGGETQMGIPFRKGNP 229

Query: 236 EWYNIVSWTH 245
           ++   +    
Sbjct: 230 KFAKALDDAL 239


>gi|323977899|gb|EGB72985.1| extracellular solute-binding protein 3 [Escherichia coli TW10509]
          Length = 266

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGSIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|313893994|ref|ZP_07827560.1| putative histidine ABC transporter, periplasmic histidine-binding
           protein HisJ [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441558|gb|EFR59984.1| putative histidine ABC transporter, periplasmic histidine-binding
           protein HisJ [Veillonella sp. oral taxon 158 str. F0412]
          Length = 270

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 17/270 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  + ++ F +     +   + +    +  G++            G+  GFD+
Sbjct: 4   KKMMAVGLAAVSMMVFVTGCGGDAKKANTELPKKVVIGLDDSFPPMGFKDDKGEIVGFDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +        ++++  ++   +   L+SK+ID L      +  RE    + F  +
Sbjct: 64  DLAKEAAKRAG---MEVEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNV 118

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              D Q  I+  +   I   + L+G  + VQ  +T E  L    ++         +    
Sbjct: 119 YMKDKQYIIVRNEDESIKGKADLAGKVVGVQQASTGEAALQKD-ESGKTVKEIKSYADFV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239
                    R DA   D     A  L    P ++ I+          A    + DT   +
Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDDFAVGFRKEDTALRD 235

Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262
            ++           A   AE+   +  +++
Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGTDLD 265


>gi|293602700|ref|ZP_06685141.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818891|gb|EFF77931.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 329

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 8/247 (3%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS--- 68
           ++    T+ +   S L  I++ G +  G     V FA +  N    G+ V+ C+ ++   
Sbjct: 39  MLGSAATAHAEGPSRLDKIRETGVITIGHPETSVPFAYLDGNQKPIGYTVEICQEVAQHI 98

Query: 69  -SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
            +A+     +++Y P  +  R   L +  ID+   NT   L R     ++F P T+    
Sbjct: 99  KAALKLPKLEVRYNPTTSATRIPLLANGTIDLECGNTTNNLDRHKL--VSFAPTTFVAQV 156

Query: 128 GFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             +  K  G+  +++    G +I  QAG  T   ++      N+       +   E    
Sbjct: 157 VLVARKDGGVDPNNLESFRGKTIAAQAGGQTFRLISGLNAKGNLGITMAPTKDTAETILM 216

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + R      D    Y    ++  P   VI    +  +P      + D  +  +V    
Sbjct: 217 VESGRAAGSANDDGIAYGAVASSKNPDAFVIGKKGLEMAPYGIMEPKDDPAFKKVVDEAV 276

Query: 246 YAMVTAE 252
             ++   
Sbjct: 277 IDLIKTG 283


>gi|90414857|ref|ZP_01222823.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK]
 gi|90324035|gb|EAS40626.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK]
          Length = 269

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 87/244 (35%), Gaps = 8/244 (3%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     +  + ++  T + +   S L DIK+RG L+ G++T  V +A     G+  GF
Sbjct: 1   MKKLLAACLAVITLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  R L+        K++++P        AL + + D++      T  R  ++ + F 
Sbjct: 60  EVDVARRLAKDAG---LKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQR--NMSVLFT 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 G     +K+K    ++        V           +  K +  K     F+  
Sbjct: 115 APYAHSGVQLAANKEKSADKLTIADYNKRSVTLSVRRGAFTVETAKKYFPKAKLRQFDDD 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +           A          + +        + L D +S+   A AI  G+ +  N
Sbjct: 175 AQAFQEVLNGNAHAVLASSPKPEQMAIQY-NEKLFIPLTDRLSRGSEAFAIRHGEFDLLN 233

Query: 240 IVSW 243
             + 
Sbjct: 234 FFNN 237


>gi|332161759|ref|YP_004298336.1| amino acid-binding periplasmic protein precursor [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665989|gb|ADZ42633.1| amino acid-binding periplasmic protein precursor [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 257

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 86/253 (33%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F      L+     S    A  +  I        G++ G   F  +  +G+  GFD
Sbjct: 1   MKKTF----AALLTGLILSAPVAAQTIETI------SFGVDGGYPPFDVLAPSGEITGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  ++    +    AL +++ D +  +   T  R+    + F  
Sbjct: 51  IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTD 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   +   V+ L G ++ VQ G+  E     ++         + +   
Sbjct: 106 RYYRSAAQLVARKGSPLSPDVASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D     +  +   R  +      +I    +      A+ + + 
Sbjct: 164 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNP 223

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 224 ALRDALNGAIKAI 236


>gi|312967121|ref|ZP_07781339.1| cystine-binding periplasmic protein [Escherichia coli 2362-75]
 gi|312288585|gb|EFR16487.1| cystine-binding periplasmic protein [Escherichia coli 2362-75]
          Length = 255

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 3   VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 63  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 117

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 118 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 173

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 231

Query: 245 H 245
            
Sbjct: 232 I 232


>gi|206971360|ref|ZP_03232311.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
 gi|206734132|gb|EDZ51303.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
          Length = 259

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 9/212 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + EI    +A R DA   + +           
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD 205


>gi|222081209|ref|YP_002540572.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725888|gb|ACM28977.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 278

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 16/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M        L    L   + S NA  L DI     ++CG    +  FA       +  GF
Sbjct: 3   MTSWTLSIALAATAL---AGSANADQLADIMTAKVIRCGTFADVPPFASPDPKTREMVGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C A++ A+   P      P++ + R   ++   +DI   N  +T+ R  S  + F 
Sbjct: 60  DVDLCGAIAQALGVKPE---IKPVSVEARVPEVKLGHVDIAVANLAYTVSR--SEQIQFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  I+         +  +G  +    G+T+EL++         K  P+ F+  
Sbjct: 115 DPYYLAKEMLIVKVGDAGQKKADFAGVRLASTKGSTSELSIR------LNKSQPLTFQDT 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A +  +      +      +   +  + +E  ++ + +   P+   + + +    
Sbjct: 169 GSAYLAVQQGKARGMVANTMTTTKIVNESKTKGAEMRMIDEPMLYQPIGIGMKKDEPALT 228

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    ++  + E+ 
Sbjct: 229 AKINEVLVSLDKSGEIN 245


>gi|218689913|ref|YP_002398125.1| cystine transporter subunit [Escherichia coli ED1a]
 gi|218695527|ref|YP_002403194.1| cystine transporter subunit [Escherichia coli 55989]
 gi|260855900|ref|YP_003229791.1| putative periplasmic binding transport protein FliY [Escherichia
           coli O26:H11 str. 11368]
 gi|300822308|ref|ZP_07102449.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 119-7]
 gi|331683472|ref|ZP_08384073.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli H299]
 gi|218352259|emb|CAU98015.1| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli 55989]
 gi|218427477|emb|CAR08373.2| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli ED1a]
 gi|257754549|dbj|BAI26051.1| putative periplasmic binding transport protein FliY [Escherichia
           coli O26:H11 str. 11368]
 gi|300525191|gb|EFK46260.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 119-7]
 gi|309702215|emb|CBJ01531.1| cystine ABC transporter, substrate-binding protein (sulfate
           starvation-induced protein 7) [Escherichia coli ETEC
           H10407]
 gi|323152747|gb|EFZ39019.1| cystine-binding periplasmic protein [Escherichia coli EPECa14]
 gi|323937195|gb|EGB33475.1| bacterial extracellular solute-binding protein 3 [Escherichia coli
           E1520]
 gi|331079687|gb|EGI50884.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli H299]
          Length = 266

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 13/243 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F 
Sbjct: 12  MSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L+  +  +       P        +L SK+ID++      +  R+      F      
Sbjct: 72  QQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTI 126

Query: 125 DGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G   ++ K     I + + L G  + V  GT  E    ++ + +        ++     
Sbjct: 127 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTK 182

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+
Sbjct: 183 YQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN 240

Query: 243 WTH 245
              
Sbjct: 241 DAI 243


>gi|16129867|ref|NP_416430.1| cystine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|74311733|ref|YP_310152.1| cystine transporter subunit [Shigella sonnei Ss046]
 gi|89108755|ref|AP_002535.1| cystine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170081568|ref|YP_001730888.1| cysteine ABC transporter periplasmic substrate binding protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|191173292|ref|ZP_03034822.1| cystine-binding periplasmic protein [Escherichia coli F11]
 gi|218558778|ref|YP_002391691.1| cystine transporter subunit [Escherichia coli S88]
 gi|227885653|ref|ZP_04003458.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Escherichia coli 83972]
 gi|238901129|ref|YP_002926925.1| cystine transporter subunit [Escherichia coli BW2952]
 gi|256022422|ref|ZP_05436287.1| cystine transporter subunit [Escherichia sp. 4_1_40B]
 gi|300935896|ref|ZP_07150852.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 21-1]
 gi|300982289|ref|ZP_07175999.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 200-1]
 gi|300993929|ref|ZP_07180604.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 45-1]
 gi|301018230|ref|ZP_07182745.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 69-1]
 gi|306814256|ref|ZP_07448422.1| cystine transporter subunit [Escherichia coli NC101]
 gi|331657965|ref|ZP_08358927.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA206]
 gi|331663418|ref|ZP_08364328.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA143]
 gi|84028139|sp|P0AEN0|FLIY_ECOL6 RecName: Full=Cystine-binding periplasmic protein; Short=CBP;
           AltName: Full=Protein fliY; AltName: Full=Sulfate
           starvation-induced protein 7; Short=SSI7; Flags:
           Precursor
 gi|84028140|sp|P0AEM9|FLIY_ECOLI RecName: Full=Cystine-binding periplasmic protein; Short=CBP;
           AltName: Full=Protein fliY; AltName: Full=Sulfate
           starvation-induced protein 7; Short=SSI7; Flags:
           Precursor
 gi|687652|gb|AAC43545.1| FliY [Escherichia coli]
 gi|1736579|dbj|BAA15740.1| cystine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1788228|gb|AAC74987.1| cystine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|73855210|gb|AAZ87917.1| putative periplasmic binding transport protein [Shigella sonnei
           Ss046]
 gi|169889403|gb|ACB03110.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|190906409|gb|EDV66018.1| cystine-binding periplasmic protein [Escherichia coli F11]
 gi|218365547|emb|CAR03274.1| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli S88]
 gi|227837226|gb|EEJ47692.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Escherichia coli 83972]
 gi|238860698|gb|ACR62696.1| cystine transporter subunit [Escherichia coli BW2952]
 gi|281178982|dbj|BAI55312.1| cystine-binding periplasmic protein precursor [Escherichia coli
           SE15]
 gi|284921833|emb|CBG34906.1| cystine ABC transporter, substrate-binding protein (sulfate
           starvation-induced protein 7) [Escherichia coli 042]
 gi|294490653|gb|ADE89409.1| cystine-binding periplasmic protein [Escherichia coli IHE3034]
 gi|300307266|gb|EFJ61786.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 200-1]
 gi|300399817|gb|EFJ83355.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 69-1]
 gi|300406430|gb|EFJ89968.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 45-1]
 gi|300458915|gb|EFK22408.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 21-1]
 gi|305852415|gb|EFM52866.1| cystine transporter subunit [Escherichia coli NC101]
 gi|307553934|gb|ADN46709.1| cysteine transport protein ABC superfamily [Escherichia coli ABU
           83972]
 gi|307626603|gb|ADN70907.1| cystine transporter subunit [Escherichia coli UM146]
 gi|315136557|dbj|BAJ43716.1| cystine-binding periplasmic protein [Escherichia coli DH1]
 gi|315286626|gb|EFU46059.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 110-3]
 gi|315290286|gb|EFU49664.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 153-1]
 gi|315296503|gb|EFU55800.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 16-3]
 gi|320194368|gb|EFW68999.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Escherichia coli WV_060327]
 gi|323165283|gb|EFZ51071.1| cystine-binding periplasmic protein [Shigella sonnei 53G]
 gi|323186800|gb|EFZ72120.1| cystine-binding periplasmic protein [Escherichia coli RN587/1]
 gi|323952415|gb|EGB48288.1| extracellular solute-binding protein 3 [Escherichia coli H252]
 gi|323956317|gb|EGB52060.1| extracellular solute-binding protein 3 [Escherichia coli H263]
 gi|323968337|gb|EGB63744.1| extracellular solute-binding protein 3 [Escherichia coli M863]
 gi|324013512|gb|EGB82731.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 60-1]
 gi|327253051|gb|EGE64705.1| cystine-binding periplasmic protein [Escherichia coli STEC_7v]
 gi|330911728|gb|EGH40238.1| cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Escherichia coli AA86]
 gi|331056213|gb|EGI28222.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA206]
 gi|331059217|gb|EGI31194.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA143]
          Length = 266

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|55823084|ref|YP_141525.1| amino acid (glutamine) ABC transporter substrate-binding protein
           [Streptococcus thermophilus CNRZ1066]
 gi|55739069|gb|AAV62710.1| amino acid (glutamine) ABC transporter substrate-binding protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 277

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 27/285 (9%)

Query: 2   YKDFF-----VSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGF 47
           +K        VS++   +   T+  T A           +  I  RG L  G+   +  F
Sbjct: 3   FKKILRYLTAVSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNF 62

Query: 48  AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
               A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L      
Sbjct: 63  GYYSAKTNRYEGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R+ S  +      Y D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  A
Sbjct: 120 NDERKASYAI--SNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASA 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           HN+K++ +      E+  +  AHR DA++ D S L   +    +     IL +       
Sbjct: 178 HNLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDY 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269
             A  + + E  +  +           L     + N+     +  
Sbjct: 233 GIASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277


>gi|54302943|ref|YP_132936.1| putative amino acid ABC transporter [Photobacterium profundum SS9]
 gi|46916371|emb|CAG23136.1| putative amino acid ABC transporter [Photobacterium profundum SS9]
          Length = 269

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 87/244 (35%), Gaps = 8/244 (3%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     +  + ++  T + +   S L DIK+RG L+ G++T  V +A     G+  GF
Sbjct: 1   MKKLLAACLAVMTLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  R L+        K++++P        AL + + D++      T  R  ++ + F 
Sbjct: 60  EVDVARRLAKDAG---LKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQR--NMSVLFT 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 G     +K+K    ++        V           +  K +  K     F+  
Sbjct: 115 SPYAHSGVQLAANKEKSADKLAIADYNKRSVTLSVRRGAFTVETAKKYFPKAKLRQFDDD 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +           A          + +        + L D +S+   A AI  G+ +  N
Sbjct: 175 AQAFQEVLNGNAHAVLASSPKPEQMAIQY-NEKLFIPLTDRLSRGSEAFAIRHGEFDLLN 233

Query: 240 IVSW 243
             + 
Sbjct: 234 FFNN 237


>gi|269127494|ref|YP_003300864.1| extracellular solute-binding protein family 3 protein
           [Thermomonospora curvata DSM 43183]
 gi|268312452|gb|ACY98826.1| extracellular solute-binding protein family 3 [Thermomonospora
           curvata DSM 43183]
          Length = 290

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 8/230 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + + S+    K+ G L  GI          K +G ++GFDVD  + ++  +  + S I +
Sbjct: 31  AESKSVAQRAKETGKLTIGIKFDQPALGLQKPDGTYEGFDVDVAKYIAKELGVEESGITW 90

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISS 139
               ++ R   L S Q+D++      T  R     + F  P         +      I  
Sbjct: 91  KEARSENRESFLASNQVDLVVATYSITEGR--KPKVTFAGPYYVAHQDTMVRADNDDIKK 148

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER---VEEIDAAYRAHRCDAYTG 196
            + L G  +C  AG+ +   + D      +    +         +          DA T 
Sbjct: 149 AADLKGKKLCKAAGSNSWRRITDPPPDGQLNIKDVELVDATGYSDCVTKLDNGALDAVTT 208

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D   L              ++ D  +       I +GDTE    V+    
Sbjct: 209 DDLILAGFASQQKGK--FKVINDPFTDEKYGVGIKKGDTETCEAVNKAIT 256


>gi|157371176|ref|YP_001479165.1| cystine transporter subunit [Serratia proteamaculans 568]
 gi|157322940|gb|ABV42037.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 265

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 81/248 (32%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + +  + L     T      ++L  +K  G L  G+      F+    +G   GF
Sbjct: 6   RRQLLLGVMSVALTAGLSTQTYAADNLLEQVKHHGTLVVGLEGTYPPFSFQGEDGKLTGF 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  +       +  P        +L SK+ID++      +  R+      F 
Sbjct: 66  EVDFANALAQHLGVKA---KLNPTKWDGMLASLDSKRIDVVINQVTISPERQK--KYDFS 120

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   ++ K     I+    L G  + V  GT  E  L D    +        ++
Sbjct: 121 TPYTVSGIQALVKKGNEGTITKPEDLKGKKVGVGLGTNYEQWLRD----NVQGVDVRTYD 176

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R +A   D   L AL L         +     S+     A+ + + E 
Sbjct: 177 DDPTKYQDLRVGRINAILVDR--LAALDLVKKTGDTLAVAGPAFSRQESGVAVRKNNPEL 234

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 235 LAAINQAI 242


>gi|16760900|ref|NP_456517.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141408|ref|NP_804750.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167552818|ref|ZP_02346569.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168244801|ref|ZP_02669733.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168259762|ref|ZP_02681735.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|194444067|ref|YP_002041219.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448487|ref|YP_002046005.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|198244762|ref|YP_002215132.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205352351|ref|YP_002226152.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856532|ref|YP_002243183.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213053509|ref|ZP_03346387.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213426352|ref|ZP_03359102.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213616254|ref|ZP_03372080.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213650341|ref|ZP_03380394.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213855801|ref|ZP_03384041.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289824076|ref|ZP_06543674.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25296353|pir||AD0750 cystine-binding periplasmic protein precursor [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503197|emb|CAD05703.1| cystine-binding periplasmic protein precursor [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137035|gb|AAO68599.1| cystine-binding periplasmic protein precursor [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|194402730|gb|ACF62952.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406791|gb|ACF67010.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197939278|gb|ACH76611.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205272132|emb|CAR36985.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205322644|gb|EDZ10483.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205336345|gb|EDZ23109.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205350934|gb|EDZ37565.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708335|emb|CAR32638.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|326622881|gb|EGE29226.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627401|gb|EGE33744.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 266

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L SK+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|149181554|ref|ZP_01860049.1| Arginine-binding protein [Bacillus sp. SG-1]
 gi|148850804|gb|EDL64959.1| Arginine-binding protein [Bacillus sp. SG-1]
          Length = 251

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 95/264 (35%), Gaps = 14/264 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +  ++     +  T+    G+ K+   +  G +     F     NG+  GFD
Sbjct: 1   MKKLFAGLMAVVVAGSLAACGTSEETSGEGKE--KIIMGTSADFPPFETRDNNGEIIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   ++   +N      ALQ+  +D ++     T  R+    + F  
Sbjct: 59  IDLAKHITEELGYE---LEIKDMNFDGLIGALQADTVDFVASGMSATDERKE--NVDFSV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G+ FI   +  I S+  L G  I VQ GT  +       ++  +       +++ 
Sbjct: 114 EYHRSGEMFITLPESEIESMDDLEGTKIGVQLGTIQDTAAQKLAES--IDIEVKALDKLP 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239
            +    +A R DA   D +          +        D  S SP +A A  +G  +   
Sbjct: 172 ALIQELKAGRIDAIYLDKTVAEGYI----KEVNLKGFDDESSVSPGMAMAFPKGSDKVEE 227

Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263
                       E   + +K + +
Sbjct: 228 FSKVIEEMKENGELKKLEEKWLKE 251


>gi|94987196|ref|YP_595129.1| amino acid ABC transporter periplasmic protein [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731445|emb|CAJ54808.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 249

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 20/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    FV IL L       F  NA        +G L    +T L+ F      G++ GFD
Sbjct: 1   MKYKIFVFILGLFFTNTFGFFANA--------KG-LVVAHDTNLMPFEFKDKEGNFVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    ++           + P++       LQ+  IDI       T  R     + F  
Sbjct: 52  IELWEHIAE---IANIPYTFQPMDFNGIIPGLQTGSIDIAISGMTITPERAKV--ILFSQ 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++   ++ IS +  L G ++ V+ GT++     D+ K+   +    +F   
Sbjct: 107 PYYESGLMILVRAGEESISKLEDLVGKTVGVKTGTSSV----DFMKSFGKQRSLKLFPTN 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + +         DA   D   L     +  +    ++ P      P   A  +   E   
Sbjct: 163 DGMFFDLMTGGVDAVVFDAPVLQYFASSAGKGKVKLVGPK-YKGQPYGIAFRKNSEELVQ 221

Query: 240 IVSWTHY 246
            V+    
Sbjct: 222 KVNTALN 228


>gi|327482800|gb|AEA86110.1| periplasmic binding protein [Pseudomonas stutzeri DSM 4166]
          Length = 251

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 22/253 (8%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   ++    +I+   +F+              L+ G       F  + A+G   G
Sbjct: 1   MKSYKKILLTAAASLIIGTQAFAAE-----------KLRIGTEGAYPPFNLIDASGKVVG 49

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   AL + +  +    + +  +      AL + + D L+ +   T  R+    + F
Sbjct: 50  FDLDISHALCAKMKVE---CEVVTSDWDGIIPALNAGKFDFLAASMSVTEERK--NAVDF 104

Query: 119 RPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y +   F+  K     +    L G  I  Q  T     L D     +      +++
Sbjct: 105 TDHYYTNKLQFVAPKNIDFKTDESYLKGKVIGAQRATIAGTWLEDNL---DRVVDIKLYD 161

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E       + R D    D    +    ++   +       +     +A A+ +G+ E 
Sbjct: 162 TQENAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDEL 221

Query: 238 YNIVSWTHYAMVT 250
              ++     ++ 
Sbjct: 222 RERLNKALAEIIA 234


>gi|331668614|ref|ZP_08369462.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA271]
 gi|331063808|gb|EGI35719.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA271]
          Length = 262

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|258621393|ref|ZP_05716427.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
 gi|258586781|gb|EEW11496.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
          Length = 281

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 24  MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 74

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +  +    + +P +      +L +++ D +      T  R+    + F  
Sbjct: 75  VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 129

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   +I  K   +  +   L G  I VQ  TT +  ++D +         + +   
Sbjct: 130 KYALIPNKYIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 186

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++           A+ + D
Sbjct: 187 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQD 246

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    ++
Sbjct: 247 KDLTEKLNAAITSL 260


>gi|206976335|ref|ZP_03237243.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus H3081.97]
 gi|217961645|ref|YP_002340215.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH187]
 gi|222097602|ref|YP_002531659.1| amino acid ABC transporter , amino acid-binding protein [Bacillus
           cereus Q1]
 gi|229140888|ref|ZP_04269433.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-ST26]
 gi|206745531|gb|EDZ56930.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus H3081.97]
 gi|217068283|gb|ACJ82533.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH187]
 gi|221241660|gb|ACM14370.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus Q1]
 gi|228642678|gb|EEK98964.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-ST26]
          Length = 259

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 26/283 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +                              I +   E  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK--------------ELQGIEIKEAPEEVG 219

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
             ++    +  TAE   + +K          +  V+++ G +K
Sbjct: 220 AAIALPKNSDKTAEFNKVIKK---MQENGEMDKLVKKWFGSEK 259


>gi|34499508|ref|NP_903723.1| amino acid ABC transporter periplasmic protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34105358|gb|AAQ61713.1| probable amino acid ABC transporter, periplasmic-binding protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 261

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 81/250 (32%), Gaps = 18/250 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  +     S +  A +L  +K+RG LK  +      F    A     GFD
Sbjct: 1   MKKWKAVLLLTAV----GSHAFAADLLDTVKQRGALKIALEGTYPPFNFKDAKQQLTGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +   P    ++          LQS + DI+      T  R+      F  
Sbjct: 57  VEIATEIARRMKVKPE---FVTAEWSGLLAGLQSGKFDIVVNQVGVTAQRQAV--FDFSQ 111

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +     I+ K +     +++ L G  + V  G+      AD  KA         +  
Sbjct: 112 PYTYSSAQLIVRKNESRDFKNLADLKGKKLGVGQGS----NYADMAKAA-AGVQVKTYPG 166

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E        R DA   D   +         P        +   + +A    +G+ ++ 
Sbjct: 167 APEYLQDLATGRLDAALNDSLLIPFAIKQAKLP--LKAGAPVGEVAAMAIPFAKGNPQFK 224

Query: 239 NIVSWTHYAM 248
           + +      M
Sbjct: 225 SEIDKALGGM 234


>gi|218699516|ref|YP_002407145.1| cystine transporter subunit [Escherichia coli IAI39]
 gi|218369502|emb|CAR17269.1| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli IAI39]
          Length = 266

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+            +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFAEEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|146284415|ref|YP_001174568.1| periplasmic binding protein [Pseudomonas stutzeri A1501]
 gi|145572620|gb|ABP81726.1| probable periplasmic binding protein [Pseudomonas stutzeri A1501]
          Length = 251

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 22/253 (8%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   ++    +I+   +F+              L+ G       F  + A+G   G
Sbjct: 1   MKSYKKILLTAAASLIIGTQAFAAE-----------KLRIGTEGAYPPFNLIDASGKVVG 49

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   AL + +  +    + +  +      AL + + D L+ +   T  R+    + F
Sbjct: 50  FDLDISHALCAKMKVE---CEVVTSDWDGIIPALNAGKFDFLAASMSVTEERK--NAVDF 104

Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y +   F+  K     +  S L G  I  Q  T     L D     +      +++
Sbjct: 105 TDHYYTNKLQFVAPKNVDFKTDESYLKGKVIGAQRATIAGTWLEDNL---DRVVDIKLYD 161

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E       + R D    D    +    ++   +       +     +A A+ +G+ E 
Sbjct: 162 TQENAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDEL 221

Query: 238 YNIVSWTHYAMVT 250
              ++     ++ 
Sbjct: 222 RERLNKALAEIIA 234


>gi|146312153|ref|YP_001177227.1| cystine transporter subunit [Enterobacter sp. 638]
 gi|145319029|gb|ABP61176.1| L-cystine-binding protein / Diaminopimelate-binding protein
           [Enterobacter sp. 638]
          Length = 266

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+            +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGLSMKTFAAEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  +  S+     AI 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVAGEPFSRQESGVAIR 229

Query: 232 QGDTEWYNIVSWTH 245
           + + +    +    
Sbjct: 230 KDNDDLVKAIDGAI 243


>gi|259907901|ref|YP_002648257.1| Histidine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96]
 gi|224963523|emb|CAX55013.1| Histidine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96]
 gi|283477778|emb|CAY73694.1| Histidine ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
 gi|310768188|gb|ADP13138.1| Histidine-binding periplasmic protein [Erwinia sp. Ejp617]
          Length = 260

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + I    S                L+ G +     F    A G   GFD
Sbjct: 1   MKKQVLALSLLMAITAAGSAFAAGP--------KTLRIGTDPTYAPFEMKNAQGQLTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K  ++  +      +L++K++D +  +   T  R     +AF  
Sbjct: 53  IDLANEICQRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKR--QQEIAFSE 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L G +I +  GTT E      ++   +   P  +   
Sbjct: 108 KLYAANSRLIAPKGSKIEPTLASLKGKTIGLLQGTTQETYANQNWRPKGVTVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D  A     L      ++      +    +        + + +
Sbjct: 166 DLVYQDLTAGRIDAAFQDEVAASEGFLKQPAGKDYAFAGPAVKDENIFGVGTGIGLSKDN 225

Query: 235 TEWYNIVSWTHYAM 248
            E  + +      M
Sbjct: 226 PELKSAIDKAFDEM 239


>gi|33592470|ref|NP_880114.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella pertussis Tohama I]
 gi|33572116|emb|CAE41656.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella pertussis Tohama I]
          Length = 262

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 72/241 (29%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + +  L+ L     +  A  L  IK  G +K G       F+   A+    GFDV+  RA
Sbjct: 8   LLLAGLVPLAMIGTAVQADDLAAIKAAGVIKIGTEGTYAPFSYHDASNKLTGFDVEIGRA 67

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +        ++          L  K+ D +      T  R+      F        
Sbjct: 68  IAQKLGVKAE---FVEGKWDGLIAGLDVKRYDAVINQVGITDARKA--KYDFSDPYISSQ 122

Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              I+    + I S + L G        T+    LA  + A       +  +   E    
Sbjct: 123 AALIVREDNQAIKSFADLKGRKSA-NTLTSNFGKLAQSYGA-----EVVPVQGFNEAIDL 176

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWT 244
             + R +A   D  +    K         V   D     S     I + + E    ++  
Sbjct: 177 LMSGRVEATVNDNLSFLDFKKQKPNAKVKVAAYDKSKEFSESGVLIRKNNPELQAAINKA 236

Query: 245 H 245
            
Sbjct: 237 L 237


>gi|253582493|ref|ZP_04859715.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
 gi|251835638|gb|EES64177.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
          Length = 246

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 17/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + +L ++++   +  T+ +     K       G N     F  +  N    G D
Sbjct: 1   MKKLFKLFMLTVLLVLAAACGTSKT--EQAKDNKVYVIGTNAEYPPFEYL-ENDQVCGLD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   A++  +     + ++   N      ALQ+K++D++      T  R     + F  
Sbjct: 58  ADIISAIAQKL---NIQYKWSNTNFDGLIPALQTKKMDVVIAGMSITPERAK--AVNFSI 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   FI +K K I+ +  L   +   + GTT E        A         F    
Sbjct: 113 PYLSSNVAFIANKNKPINGIEDLENKNFGAELGTTKEAAARKIKGA-----TVTPFSSNT 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A ++ + DA   D S   A+K   + P   ++L   +   P A A  + DTE    
Sbjct: 168 GALVALKSSKIDAIVLDES--VAVKFVENNPE--LMLVGTLEGEPKAIAFNKDDTELMEK 223

Query: 241 VSWTHYAMV 249
            +     ++
Sbjct: 224 FNKALQELI 232


>gi|299535150|ref|ZP_07048475.1| cystine-binding periplasmic protein precursor [Lysinibacillus
           fusiformis ZC1]
 gi|298729467|gb|EFI70017.1| cystine-binding periplasmic protein precursor [Lysinibacillus
           fusiformis ZC1]
          Length = 265

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 12/249 (4%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +      +L  +I+     S+             +  +  GI+             D 
Sbjct: 1   MKRVVTLFMMLTAVIVLAACGSSKEKTAEKDETAADQEKMIIGIDDKFAPMGFRDDKNDI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  RA +  +  +     + P++ K +   L S +ID++      T  R+    +
Sbjct: 61  VGFDIDLARAAAEHMGVEAE---FQPIDWKTKEAELLSGRIDLIWNGYTITDERKE--KV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F      + Q  I      I+ +S L+G  + +Q+ ++    L      H        F
Sbjct: 116 LFTKPYLENSQVVITKADSKITKLSDLAGQEVGIQSLSSAADALN-GNPIHKEVKKMTEF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                  +  +  R DA   D                  +L + ++       +  G+  
Sbjct: 175 ADNVLALSDLKTGRVDAVVIDAVVAEYYMTQEPN--TFKLLEESLAPEQYGIGVKPGNEA 232

Query: 237 WYNIVSWTH 245
               +    
Sbjct: 233 LLEKLQAAL 241


>gi|299529975|ref|ZP_07043402.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni S44]
 gi|298721955|gb|EFI62885.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni S44]
          Length = 307

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 6/232 (2%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS---SAIFDDPSKIQYL 81
            L  I+  G +  G+       +    NG + GF V+ C +AL+     +      I+Y 
Sbjct: 24  TLDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLDIRYQ 83

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + A+ R   + +  +D+    T     R+  +   F P  Y +     + K  GI+ V+
Sbjct: 84  MVTAQNRVPLVANGTVDVECGTTTNNAARQKEVA--FAPTVYMEEVRTAVRKNSGITEVA 141

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL G ++    G T    L  + K   + ++ ++ +   E        R DA   D   L
Sbjct: 142 QLKGRNVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFILLETGRADACVADGQIL 201

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            +       P ++ I+ +  S  P+A  + +   E+  +       M ++ E
Sbjct: 202 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIRGMASSGE 253


>gi|229075861|ref|ZP_04208837.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock4-18]
 gi|228707176|gb|EEL59373.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock4-18]
          Length = 259

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N  +  +   +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGDVKEENGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDIDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++ K  + K      +R
Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEFKKQVDFKAEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAILEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|224583545|ref|YP_002637343.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224468072|gb|ACN45902.1| cystine-binding periplasmic protein precursor [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 266

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L SK+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|302534451|ref|ZP_07286793.1| sugar binding protein [Streptomyces sp. C]
 gi|302443346|gb|EFL15162.1| sugar binding protein [Streptomyces sp. C]
          Length = 336

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 10/232 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   +  I+K G L  G++     +     +G   GFD+D  +A++  I  +   + Y  
Sbjct: 84  DGPAIERIRKAGKLVAGVDQNSFKWGYRNPDGHLDGFDIDLVKAIAKDILGNEDLVIYRA 143

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +   +R  ALQ  ++DI+ R       R     +AF    +  GQ  +  K   I+    
Sbjct: 144 IPTSQRVPALQEGRVDIVVRTMTINCKR--LEDVAFSTAYFEAGQQVLAPKGSPITGYDA 201

Query: 143 -LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  IC  AG+T E  L    K+ +     +      +     +    +    D +  
Sbjct: 202 SLKGRRICTAAGSTAEAAL----KSQSYGSVGVSVANQLDCLVRLQLGEVEGIITDNALA 257

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
                 +       ++    ++     A+ +  ++    V+          E
Sbjct: 258 AGQAAQDP---SVQLVGAPFTREFYGVAMNKDASDLVRRVNKVLENYRAGGE 306


>gi|289643954|ref|ZP_06476056.1| extracellular solute-binding protein family 3 [Frankia symbiont of
           Datisca glomerata]
 gi|289506230|gb|EFD27227.1| extracellular solute-binding protein family 3 [Frankia symbiont of
           Datisca glomerata]
          Length = 254

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 85/222 (38%), Gaps = 10/222 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L  I  RG+L  G+      F  V  + G+++GFDVD    +   +F  P  +++  +
Sbjct: 11  PALRRIFDRGYLIVGVRPDTPPFGSVNPDTGEFEGFDVDIANLVGRWLFGAPRHVRFRAI 70

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A +R   +   +ID+ + +   T   +  L + F  + Y    G ++ +     S++ L
Sbjct: 71  TAAQRLPLVAQGEIDLSTGSLTATC--DRLLEVDFATVYYMTATGLLVSRDSNYHSLADL 128

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  +C  +GTT+   + +          P     V +   A +    +    D   L  
Sbjct: 129 GGRKVCAASGTTSLQAIENEP----SHPIPYPVSNVADCLIALQDGEVEGIVNDEMVLAG 184

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L      P  HV+  D     P+   + + + +    V+   
Sbjct: 185 LAAQ--DPRTHVVNADRFD-QPITAGVSKDNPDLTAFVNGVL 223


>gi|304398823|ref|ZP_07380693.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304353527|gb|EFM17904.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 257

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 82/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + LI           ++L  IK+RG L  G+      F+     G   GF+V+F   
Sbjct: 5   VMAVALIAGVNVKTFAAENLLNKIKERGTLLVGLEGTYPPFSFQDEKGKLTGFEVEFAEQ 64

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +          P        +L +K+ID++      +  R+      F       G
Sbjct: 65  LAQHMGVKA---SLKPTKWDGMLASLDAKRIDVVINQVTISDERKK--KYDFSTPYTVSG 119

Query: 127 QGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              +  K     I+  + L+G  + V  GT  E  L +  K          ++       
Sbjct: 120 IQALTMKANASTITKPADLAGKKVGVGLGTNYEQWLRENVK----GVDIRTYDDDPTKYQ 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R+ R +A   D   L AL L         +  D  S+     A+ +G+ +    V+  
Sbjct: 176 DLRSGRLNAILVDR--LAALDLVKKTGDTMAVAGDAFSRQESGVAMRKGNDDLLKAVNQA 233

Query: 245 H 245
            
Sbjct: 234 I 234


>gi|238756657|ref|ZP_04617947.1| Cystine-binding periplasmic protein [Yersinia ruckeri ATCC 29473]
 gi|238705126|gb|EEP97553.1| Cystine-binding periplasmic protein [Yersinia ruckeri ATCC 29473]
          Length = 257

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 79/245 (32%), Gaps = 15/245 (6%)

Query: 5   FFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
             + ++ + +    +        +L  +K+RG L  G+      F+    +G   GF+VD
Sbjct: 1   MVLGMMAVALATGLNVKSYAAGDLLDQVKQRGILIVGLEGTYPPFSFQGEDGKLTGFEVD 60

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  AL+  +       +  P        +L+SK+ID+           +      F    
Sbjct: 61  FANALAQHMGVKA---KLQPTKWDGMLASLESKRIDVAINQVTI--SADRKKKYDFSTPY 115

Query: 123 YFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              G   +  K      +    L G  + V  G+  E  L    +A+        ++   
Sbjct: 116 TLSGIQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQWL----RANLKGVDIRTYDDDP 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 R  R DA   D   L AL L        V      ++     A+ + + E    
Sbjct: 172 TKYQDLRIGRTDAILVDR--LAALDLVKKTGDTLVAAGPAFARQESGVALRKNNPELLAA 229

Query: 241 VSWTH 245
           ++   
Sbjct: 230 INQAI 234


>gi|15802355|ref|NP_288381.1| cystine transporter subunit [Escherichia coli O157:H7 EDL933]
 gi|15831913|ref|NP_310686.1| cystine transporter subunit [Escherichia coli O157:H7 str. Sakai]
 gi|168751846|ref|ZP_02776868.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758231|ref|ZP_02783238.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168771524|ref|ZP_02796531.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168783314|ref|ZP_02808321.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168802264|ref|ZP_02827271.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC508]
 gi|189405428|ref|ZP_02815331.2| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC869]
 gi|195939224|ref|ZP_03084606.1| cystine transporter subunit [Escherichia coli O157:H7 str. EC4024]
 gi|208810217|ref|ZP_03252093.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208817069|ref|ZP_03258189.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821419|ref|ZP_03261739.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396748|ref|YP_002271034.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217329017|ref|ZP_03445098.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254793570|ref|YP_003078407.1| cystine transporter subunit [Escherichia coli O157:H7 str. TW14359]
 gi|261227585|ref|ZP_05941866.1| extracellular solute-binding protein family 3 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255815|ref|ZP_05948348.1| extracellular solute-binding protein family 3 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283097|ref|YP_003499915.1| Cystine-binding periplasmic protein [Escherichia coli O55:H7 str.
           CB9615]
 gi|12516018|gb|AAG56935.1|AE005414_12 putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13362127|dbj|BAB36082.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|188014185|gb|EDU52307.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|188999320|gb|EDU68306.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354911|gb|EDU73330.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189359726|gb|EDU78145.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189370199|gb|EDU88615.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189375717|gb|EDU94133.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208724733|gb|EDZ74440.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731412|gb|EDZ80101.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741542|gb|EDZ89224.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158148|gb|ACI35581.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209766998|gb|ACI81811.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209767000|gb|ACI81812.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209767002|gb|ACI81813.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209767004|gb|ACI81814.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209767006|gb|ACI81815.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|217318364|gb|EEC26791.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254592970|gb|ACT72331.1| cystine transporter subunit; periplasmic-binding component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290762970|gb|ADD56931.1| Cystine-binding periplasmic protein [Escherichia coli O55:H7 str.
           CB9615]
 gi|320191895|gb|EFW66542.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Escherichia coli O157:H7 str. EC1212]
 gi|320641768|gb|EFX11156.1| cystine transporter subunit [Escherichia coli O157:H7 str. G5101]
 gi|320647128|gb|EFX15961.1| cystine transporter subunit [Escherichia coli O157:H- str. 493-89]
 gi|320652411|gb|EFX20709.1| cystine transporter subunit [Escherichia coli O157:H- str. H 2687]
 gi|320658013|gb|EFX25775.1| cystine transporter subunit [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320658585|gb|EFX26279.1| cystine transporter subunit [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320668483|gb|EFX35310.1| cystine transporter subunit [Escherichia coli O157:H7 str. LSU-61]
 gi|326342329|gb|EGD66110.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Escherichia coli O157:H7 str. 1044]
 gi|326344835|gb|EGD68582.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Escherichia coli O157:H7 str. 1125]
          Length = 266

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + LI         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALIAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|149003286|ref|ZP_01828182.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS69]
 gi|225861334|ref|YP_002742843.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649206|ref|ZP_04523458.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CCRI 1974]
 gi|237821815|ref|ZP_04597660.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230584|ref|ZP_06964265.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255879|ref|ZP_06979465.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298503236|ref|YP_003725176.1| amino acid ABC superfamily transporter ATP-binding protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|147758746|gb|EDK65743.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS69]
 gi|225726532|gb|ACO22383.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238831|gb|ADI69962.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pneumoniae TCH8431/19A]
 gi|327389684|gb|EGE88029.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus pneumoniae GA04375]
          Length = 278

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGSRK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTTLVKKINEA 247


>gi|15901347|ref|NP_345951.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae TIGR4]
 gi|15903396|ref|NP_358946.1| amino acid ABC transporter amino acid-binding protein
           [Streptococcus pneumoniae R6]
 gi|116515532|ref|YP_816790.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae D39]
 gi|148992615|ref|ZP_01822283.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|168489661|ref|ZP_02713860.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae SP195]
 gi|168492570|ref|ZP_02716713.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|225857126|ref|YP_002738637.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|225859258|ref|YP_002740768.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|14972989|gb|AAK75591.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae TIGR4]
 gi|15459000|gb|AAL00157.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116076108|gb|ABJ53828.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae D39]
 gi|147928632|gb|EDK79646.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|183571997|gb|EDT92525.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae SP195]
 gi|183573309|gb|EDT93837.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|225721472|gb|ACO17326.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|225726140|gb|ACO21992.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|332072292|gb|EGI82775.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus pneumoniae GA17570]
          Length = 278

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTNLVKKINEA 247


>gi|332074249|gb|EGI84726.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus pneumoniae GA17545]
          Length = 278

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTNLVKKINEA 247


>gi|217032569|ref|ZP_03438059.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128]
 gi|216945774|gb|EEC24398.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128]
          Length = 190

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 4   DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             +   L LI L F++ S +       L  IK+RG LK G+ +    F  V + G ++G+
Sbjct: 8   KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  RE    + F 
Sbjct: 68  DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G I  K   I ++ +L    + V  GTT +      F  +      + FE+ 
Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180

Query: 180 EEID 183
            E  
Sbjct: 181 TETF 184


>gi|300904807|ref|ZP_07122634.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 84-1]
 gi|301305261|ref|ZP_07211358.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 124-1]
 gi|300403275|gb|EFJ86813.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 84-1]
 gi|300839467|gb|EFK67227.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 124-1]
 gi|315257249|gb|EFU37217.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 85-1]
          Length = 266

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V ++ L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMVVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|261750336|ref|ZP_05994045.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261740089|gb|EEY28015.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
          Length = 256

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  +++         A      K+   ++         F  +  +G   GFD
Sbjct: 1   MKSLVLAGLASVVLTVSVQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   ALS A+    +K   +  +       LQ+ + D +  +   T  R+  +   F  
Sbjct: 55  LDIANALSEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 109

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   I S   S  +G  +  QAGTT      D +          ++  
Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ QGD +  
Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227

Query: 239 NIVSWTHY 246
              +    
Sbjct: 228 EQFNAAIK 235


>gi|195977959|ref|YP_002123203.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974664|gb|ACG62190.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 270

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 76/253 (30%), Gaps = 16/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M +    ++  + +L   +            I++ G L   ++     F     V     
Sbjct: 3   MKRLLVGALAMVSVLALAACGQTNKTSLQDRIQENGKLVVAVSPDYAPFEFKALVDGKDT 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D++  +A++  +      ++   +N      +LQ+ + DI      +T  R     
Sbjct: 63  IVGADIELAQAIADELGVK---LELSAMNFDNVLSSLQTGKADIAISGLSYTKERAKV-- 117

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      ++        ++   L+G  + VQ G+  E  + +     N     
Sbjct: 118 YDFSEAYYETENAILVKASDAKRYANKDSLAGKKVAVQKGSIEEGLVKEQLNKANC---- 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +    + E     ++ +  A   +          +   +              A A+ +G
Sbjct: 174 VSLTVMGEAINELKSGQVQAVDLEAPVAAGFLAQHKDLALAPFKLQTGDGDAKAVAMPKG 233

Query: 234 DTEWYNIVSWTHY 246
             +    ++    
Sbjct: 234 SDDLRQTINKVIK 246


>gi|221232213|ref|YP_002511366.1| putative amino acid ABC transporter,extracellular amino
           acid-binding protein [Streptococcus pneumoniae ATCC
           700669]
 gi|220674674|emb|CAR69247.1| putative amino acid ABC transporter,extracellular amino
           acid-binding protein [Streptococcus pneumoniae ATCC
           700669]
 gi|301802221|emb|CBW34971.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus pneumoniae INV200]
          Length = 278

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTNLVKKINEA 247


>gi|168263667|ref|ZP_02685640.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|198245988|ref|YP_002214793.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|197940504|gb|ACH77837.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|205347748|gb|EDZ34379.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
          Length = 248

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYTKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  E    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|228909990|ref|ZP_04073810.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           IBL 200]
 gi|228849507|gb|EEM94341.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           IBL 200]
          Length = 259

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K    L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSIFSACSNGEEKATGKSEKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|218283494|ref|ZP_03489484.1| hypothetical protein EUBIFOR_02074 [Eubacterium biforme DSM 3989]
 gi|218215762|gb|EEC89300.1| hypothetical protein EUBIFOR_02074 [Eubacterium biforme DSM 3989]
          Length = 260

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 78/253 (30%), Gaps = 15/253 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +   ++       ++   L  I+ +G +  G+      F+    +    G D
Sbjct: 1   MKKLLAGLLSTTMVFTLVGCGSSKDHLATIQDKGEITIGLEGDWQPFSYHDKDDKLVGVD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + ++  +    + ++            L +   D++    D T  RE      F  
Sbjct: 61  VEVAKNIAKKLGVKANIVEGK---WDGLLTGLSTGTYDLVINGVDITKEREK--KFDFST 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +D    ++      I+S   L G +     G+T      D              + +
Sbjct: 116 PYAYDHTVLVVRNDNTTITSFGDLKGKTTANSIGSTYMELGED------YGATVKGVDDL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--W 237
            +     ++   DA     +++     T    S   I+      +P A  +++GD     
Sbjct: 170 TKCMDLVKSGGVDATINAATSINDYLQTTKDSS-FKIVDQSKESTPYAIPMVKGDDNASL 228

Query: 238 YNIVSWTHYAMVT 250
              V+     +  
Sbjct: 229 KKAVNKALKELKE 241


>gi|194434955|ref|ZP_03067198.1| cystine-binding periplasmic protein [Shigella dysenteriae 1012]
 gi|194416790|gb|EDX32916.1| cystine-binding periplasmic protein [Shigella dysenteriae 1012]
 gi|320178179|gb|EFW53156.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Shigella boydii ATCC 9905]
          Length = 255

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 3   VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 63  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 117

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 118 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 173

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 231

Query: 245 H 245
            
Sbjct: 232 I 232


>gi|116514325|ref|YP_813231.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116093640|gb|ABJ58793.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 295

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77
             S   S     K+   +  G+      F       G  +GF++D   A++  I    SK
Sbjct: 39  CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 98

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
             + P+  K R   L +  +D +      T  R     + F  + +   +  I+ K   I
Sbjct: 99  AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 156

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S++ L+   + V A   T+  +A+       K     F+       A +A + D    D
Sbjct: 157 RSIADLNKKGVVVIAIKGTD--VANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMIDD 214

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              L  L        E  +    +++ P    + +G TE    ++    
Sbjct: 215 NGILAGLIANTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 260


>gi|89258357|gb|ABD65400.1| putative periplasmic substrate binding protein [Ochrobactrum
           anthropi]
          Length = 261

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 11/229 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  L  IK  G LK  ++     F  V    +  GFD     A++  +   P  I    
Sbjct: 26  QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMQLKPQLIT--- 82

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    L++ + D +  +   T  RE    + F    Y  G+   + +   +  +  
Sbjct: 83  TAWDGIVAGLRAGKFDTVVGSMTITPEREK--AVDFVGPYYHAGRAVFVKEDSAVQKLDD 140

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISAL 201
           L G ++ V  G T E             +    ++ + E+     + R DA    +I  +
Sbjct: 141 LKGKTLGVTLGETHEKWAR-----SQGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 195

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            A+K T  +  +            +  AI + + E    +      ++ 
Sbjct: 196 VAIKETGQKVRKLDTPDIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA 244


>gi|257461155|ref|ZP_05626253.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441529|gb|EEV16674.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 270

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 100/243 (41%), Gaps = 16/243 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F +++ C  I         A+ L +I++ G ++ G+  G    +E   NG ++GF+
Sbjct: 1   MRSLFILALFCASIF--------ANTLDEIRQAGVIRVGVREGRPPLSESN-NGKFEGFE 51

Query: 61  VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++   +++  IF D   ++Q++ + A ER   L++ ++D++      T  R+    + F 
Sbjct: 52  IELASSIAKDIFGDKKGEVQFVAVTAGERIPFLKNNKVDMVIGTFMITQERKK--QVDFS 109

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K+  +   +Q+    I ++       ++ + +       + +  +  
Sbjct: 110 LPYLSVNFGIVTRKEDQVKDFAQVRDMRISIEKN--PNGSMTERYLRKEKFSNLVYCKNT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E  A  +  R D Y  D   + A  +     +  V   ++ +   L   + +G+    +
Sbjct: 168 SECYAMMKDGRADGYANDNIIVLAYAVV--DDTLEVPFKNLGAAEFLGVGVQKGNQSLLD 225

Query: 240 IVS 242
            ++
Sbjct: 226 FIN 228


>gi|320353114|ref|YP_004194453.1| PAAT family amino acid ABC transporter substrate-binding protein
           [Desulfobulbus propionicus DSM 2032]
 gi|320121616|gb|ADW17162.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 248

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 19/247 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M ++  + + C ++LF  S S              L  GI+     FA +   G   GFD
Sbjct: 1   MLRNALLILACALMLFSGSASAAT----------KLVNGIDANFPPFAFIDKTGAPSGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      + + P+       +L +K+IDI++     T  R     + F  
Sbjct: 51  VEAMNWIAKDMG---VAVSHQPIEWDGIITSLLTKKIDIIASGMSITPDRAK--QVNFTL 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI-CVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  +  K   ++  + LSG  I  VQ GT+    L +   A    +    +   
Sbjct: 106 PYWVIKQVMVTKKGSPLTIDAILSGKKILGVQQGTSEAKWLKEQAAAKGWNFELRYYNSS 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R DA   D +         +     V+    + +     A+ +GD E  +
Sbjct: 166 PLAVEDLLNGRIDAAAMDDAPAKDAAAKKE---VQVLGTFGMEQEEFGYAVRKGDQELLD 222

Query: 240 IVSWTHY 246
            V+ +  
Sbjct: 223 KVNASLK 229


>gi|259908946|ref|YP_002649302.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96]
 gi|224964568|emb|CAX56081.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96]
 gi|283478952|emb|CAY74868.1| Arginine ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
 gi|310767151|gb|ADP12101.1| Arginine-binding periplasmic protein 1 [Erwinia sp. Ejp617]
          Length = 243

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L  ++                ++         F  + AN   +GFD
Sbjct: 1   MKKIVIAALLAGFSLSASASQ-------------TIRFAAEASYPPFEFIDANNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I  D     +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCREIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++SV  L G  + VQ GTT +  +A+           + ++  +
Sbjct: 103 AYYDNSALFITQKG-KVTSVDALKGKRVGVQNGTTHQKYIAEKLP----DVKVVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +  R DA  GD + +       + P    +   +  K+     +    ++  + 
Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWL--KNNPELAPLGDKVTDKTYFGSGLGIAVSQSNSE 215

Query: 241 VSWTHYAMV 249
           +     A +
Sbjct: 216 LQGKLNAAL 224


>gi|91789327|ref|YP_550279.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91698552|gb|ABE45381.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 266

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 86/260 (33%), Gaps = 15/260 (5%)

Query: 1   MY-----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M      K  F   +    L   +     + L D+ K   +   I T    +  V  +  
Sbjct: 1   MKLPQLSKRLFSLSMMSAALLVAAGVQAQTALDDVMKAKKITIAIPTDFPPYGFVGPDLK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G D+D    +++ +  +   I+  P+++  R   LQ+++ D++         RE    
Sbjct: 61  PQGLDIDMANYIAAKLGVE---IELTPVSSANRVPYLQTRKADLVISTLGKNAEREKV-- 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F        Q     K   I S + LSG SI V  G   +  L     A         
Sbjct: 116 IDFTAAYSPFFQAVFAPKSMSIKSFADLSGKSIGVTRGAIEDQELTKLAPA---GADIKR 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE      +++ A +        S   A  +    P        ++  SP    + +G+ 
Sbjct: 173 FEDNNATVSSFVAGQVQLIATGAS--VAGNMMAKNPKLAAEYKLLLKDSPNFIGVGKGED 230

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +    V+        A ++ 
Sbjct: 231 KLRLKVNEIIATGKKAGDID 250


>gi|298369229|ref|ZP_06980547.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283232|gb|EFI24719.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria sp. oral taxon 014 str. F0314]
          Length = 271

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 92/257 (35%), Gaps = 11/257 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++ C  +        N +           + G+N     F    + G+ +GFD
Sbjct: 3   MKKWIIAAVACSALALGACGGQNKNS-SAANPYKVYRVGMNAEFAPFESQTSEGNVEGFD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++ A      K+++     +  F +L +  IDI+      T  R+    + F  
Sbjct: 62  VDLMNAMAKA---GNFKVEFKHQPWESLFPSLGNGDIDIVISGVTITDERK--QSMDFSD 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  ++ K K ++S   L     + V  G T + +++    + N       FE V
Sbjct: 117 PYFEITQVVLVPKGKKVASSDDLKNMAKVGVVTGQTGDFSVSKLLGSDN--PKISRFETV 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             I         D+   D + +      N  +  + + LPD  S      A+ +GD    
Sbjct: 175 PLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFITLPD-FSVENYGIAVRKGDEAAV 233

Query: 239 NIVSWTHYAMVTAEELG 255
            +++     +  + E  
Sbjct: 234 KMLNDALKKVRESGEYD 250


>gi|311108429|ref|YP_003981282.1| L-cystine-binding protein TcyA [Achromobacter xylosoxidans A8]
 gi|310763118|gb|ADP18567.1| L-cystine-binding protein TcyA [Achromobacter xylosoxidans A8]
          Length = 260

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 77/256 (30%), Gaps = 18/256 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +  FV+ L  +     + + +   L  IK  G  K G       F    A+G   G
Sbjct: 1   MKLFRTLFVAGLVQVAALSAAHAQSG--LDQIKSAGVFKIGTEGTYAPFTFHDASGQLTG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  RA++  +       Q++          L +K+ D +      T  R       F
Sbjct: 59  FDVDIGRAIAERLGVKA---QFVEGKWDGLIAGLDAKRYDAVINQVGITDARRA--KYDF 113

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I+      I S   L G        T+    LA    A       I  +
Sbjct: 114 SDPYISSAAVLIVRDDNTSIKSFDDLKGKKSA-NTLTSNFGKLAQQHGA-----EVIAVQ 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236
              E      + R +A   D  +    K         +   D     S     I +G+ E
Sbjct: 168 GFNEAIDLLTSGRVEATVNDNLSFLDFKKQKPNAKVKIAATDKTAEFSNSGVLIRKGNPE 227

Query: 237 WYNIVSWTHYAMVTAE 252
               ++    A + A+
Sbjct: 228 LQAAINKAL-ADIKAD 242


>gi|320010776|gb|ADW05626.1| extracellular solute-binding protein family 3 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 344

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 77/242 (31%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               +   +   +  I+KRG L  G++     +      +   +GFD+D   A++  I  
Sbjct: 69  ASLPARDADGPNIQKIRKRGKLIAGVDQNSFQWGYRNPESRTLEGFDIDLVHAIAEDILG 128

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           D   + +  +   +R  AL++ ++D++ R       R     +AF    +  GQ  +  K
Sbjct: 129 DRDAVIFRAIPTNQRIAALENDKVDVVVRTMTINCRR--IGQVAFSTAYFQAGQQVLAPK 186

Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTLA---------DYFKAHNMKYHPIVFERVEEID 183
              I   ++ L G  +C   G+T    L          D           +      +  
Sbjct: 187 TSTIDGYNESLKGKRVCTAEGSTAYDALKEKSFGAVYEDEHDGTGQDEDLLTVPNQLDCL 246

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +           P+  +      +      A   G  +    V+ 
Sbjct: 247 VRLQLGEVDAIVTDNALAAGQAAQ--DPAVELKGDKPFTTEYYGVAAKLGADDLVARVNH 304

Query: 244 TH 245
             
Sbjct: 305 VL 306


>gi|172063856|ref|YP_001811507.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171996373|gb|ACB67291.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 259

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 87/246 (35%), Gaps = 22/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +   +L   + +              ++ G       F    A+G  +G +
Sbjct: 1   MRKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + +   +     K Q++ ++      AL++KQID +      T  RE    + F  
Sbjct: 50  IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPERE--QSVDFTR 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I        +  +  GI+  +  L G +I VQ  +T E  L     A     +  V++ +
Sbjct: 105 IFTTAPVQLVAKQGSGITDNAATLRGKTIGVQTASTHESYLRRRLPASKSGINVKVYQTL 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E      A R DA   D +  Y       R      +   I+ + +     A A+ +GD
Sbjct: 165 DEAWLDLEAGRVDAVFADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224

Query: 235 TEWYNI 240
                +
Sbjct: 225 APLKAL 230


>gi|301029372|ref|ZP_07192468.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 196-1]
 gi|299877727|gb|EFI85938.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 196-1]
          Length = 285

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 13/243 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F 
Sbjct: 31  MSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFA 90

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L+  +  +       P        +L SK+ID++      +  R+      F      
Sbjct: 91  QQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTI 145

Query: 125 DGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G   ++ K     I + + L G  + V  GT  E    ++ + +        ++     
Sbjct: 146 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTK 201

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+
Sbjct: 202 YQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN 259

Query: 243 WTH 245
              
Sbjct: 260 DAI 262


>gi|255659155|ref|ZP_05404564.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Mitsuokella multacida DSM 20544]
 gi|260848605|gb|EEX68612.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Mitsuokella multacida DSM 20544]
          Length = 261

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 81/258 (31%), Gaps = 15/258 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKK--RGFLKCGINTGLVGFAEVKA-NGDWKG 58
            K F +   C+      +    +             LK G +     F        +++G
Sbjct: 4   KKLFVLLAACVFATLALAGCGGSDSASSGSGSSAKVLKVGSSIDFAPFEFQDEGQKEYQG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  RA+   +  +   ++   +       ALQ+K ID++         R     ++F
Sbjct: 64  FDMDLIRAIGKEMGYE---VEVQNIGFDGLIPALQAKNIDVIISGMTINDER--KQNVSF 118

Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   ++    + I S   L G  + VQ GTT+   +                 
Sbjct: 119 SDPYYQSGLTMVVRSDEQAIKSFQDLKGHKVAVQIGTTSVEAVKKL-----GGVEVKELN 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +     + H  DA   D          +   +    L + ++      A+ + +TE 
Sbjct: 174 TPADCFMELKGHGVDAVVNDRPVNDYYITKSGE-TGVKALEEKLTAEDYGIALAKDNTEL 232

Query: 238 YNIVSWTHYAMVTAEELG 255
            + ++     +    E  
Sbjct: 233 QSKINEALKKLKENGEYD 250


>gi|163735254|ref|ZP_02142689.1| amino-acid ABC transporter, periplasmic binding protein
           [Roseobacter litoralis Och 149]
 gi|161391468|gb|EDQ15802.1| amino-acid ABC transporter, periplasmic binding protein
           [Roseobacter litoralis Och 149]
          Length = 278

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 11/247 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F +++  I++     +  A  L  IK+ G L  G  T     + +  N + KG+   
Sbjct: 2   RPLFAALIAAILM---PAAAQAQTLERIKENGQLVIGFRTDAAPLSYLGEN-EPKGYTPT 57

Query: 63  FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C      +++A+     +I + P+ A+ RF  + +  ID+L      TL R     + F
Sbjct: 58  VCYVLASKIAAAVELPDMEIIFRPVTAENRFEEVANGNIDLLCGAATITLER--RELVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y DG   ++ K     S+ +L+G  + V++ TTT   L +   A ++    +VF+ 
Sbjct: 116 SVPVYVDGTVVVLKKDGP-ESLDELAGMKVGVRSATTTLDALQNSLNAADIAAEVVVFDD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                AA       AY  D S L  +   ++   +  +   +++      A+ +GDTE+ 
Sbjct: 175 HPTGMAALEQDEITAYFADQSILMNMVAQSEVADDLKVFDQLLTVEKQGLAMARGDTEFR 234

Query: 239 NIVSWTH 245
            IV    
Sbjct: 235 LIVDRGL 241


>gi|150019590|ref|YP_001311844.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149906055|gb|ABR36888.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 278

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 14/232 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPS 76
            S+NAS L  IK +G L  G +     +     V       GFD+D  + ++  +  +  
Sbjct: 36  TSSNASALQAIKSKGKLVIGTSADYPPYEFHKEVDGKDKIVGFDIDIAQEIAKDLGVE-- 93

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++   +      +ALQS +ID++      T  R       F  I Y     F++     
Sbjct: 94  -LEVKDMAFDGLLVALQSDKIDMVFAGMTPTDER--KQNADFSDIYYTATHRFVLRSGDE 150

Query: 137 --ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+ +  L    I VQ G+  E    D F A N        ++V ++    + ++ DA 
Sbjct: 151 AGITKMEDLKNKKIGVQKGSIQEGIAKDNFDAAN----IKSLDKVTDLILDLKNNKVDAV 206

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +          N+  +    L         A A+ +G T+  + V+ T  
Sbjct: 207 LAEQPVAQINVDKNEGIAIADKLEVKDPDGGSAIAMKKGSTDLTDQVNKTIK 258


>gi|162419996|ref|YP_001607785.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Yersinia pestis Angola]
 gi|162352811|gb|ABX86759.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis Angola]
          Length = 262

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 12/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K        L+++   + +  A  L  I++RG L+  +      F  V  +   +G+D+
Sbjct: 4   KKRMLWLWAVLVLV--QAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  +     K+Q + + +  R   LQ+ ++D++  +      RE    +AF   
Sbjct: 62  DMAQYLADKM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSRA 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   +    QL+G +I V  G   ++ L++             +E    
Sbjct: 117 YEPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKA---AQIRRYEDNNT 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + + +        + AL      P +  +   ++  SP    + QG+      V
Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231

Query: 242 SWTH 245
               
Sbjct: 232 DALI 235


>gi|52141344|ref|YP_085485.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus E33L]
 gi|51974813|gb|AAU16363.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus E33L]
          Length = 259

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKTTGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|82543612|ref|YP_407559.1| cystine transporter subunit [Shigella boydii Sb227]
 gi|110805893|ref|YP_689413.1| cystine transporter subunit [Shigella flexneri 5 str. 8401]
 gi|187732594|ref|YP_001879709.1| cystine transporter subunit [Shigella boydii CDC 3083-94]
 gi|188491699|ref|ZP_02998969.1| cystine-binding periplasmic protein [Escherichia coli 53638]
 gi|191168309|ref|ZP_03030102.1| cystine-binding periplasmic protein [Escherichia coli B7A]
 gi|193066396|ref|ZP_03047444.1| cystine-binding periplasmic protein [Escherichia coli E22]
 gi|193071146|ref|ZP_03052070.1| cystine-binding periplasmic protein [Escherichia coli E110019]
 gi|194429921|ref|ZP_03062431.1| cystine-binding periplasmic protein [Escherichia coli B171]
 gi|194439567|ref|ZP_03071640.1| cystine-binding periplasmic protein [Escherichia coli 101-1]
 gi|218554504|ref|YP_002387417.1| cystine transporter subunit [Escherichia coli IAI1]
 gi|218705415|ref|YP_002412934.1| cystine transporter subunit [Escherichia coli UMN026]
 gi|260844324|ref|YP_003222102.1| putative periplasmic binding transport protein FliY [Escherichia
           coli O103:H2 str. 12009]
 gi|293405406|ref|ZP_06649398.1| cystine transporter subunit [Escherichia coli FVEC1412]
 gi|293410279|ref|ZP_06653855.1| cystine transporter subunit [Escherichia coli B354]
 gi|293415231|ref|ZP_06657874.1| cystine transporter subunit [Escherichia coli B185]
 gi|293446302|ref|ZP_06662724.1| cystine transporter subunit [Escherichia coli B088]
 gi|298381050|ref|ZP_06990649.1| cystine transporter subunit [Escherichia coli FVEC1302]
 gi|300818656|ref|ZP_07098864.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 107-1]
 gi|300899174|ref|ZP_07117452.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 198-1]
 gi|300917362|ref|ZP_07134031.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 115-1]
 gi|300925013|ref|ZP_07140936.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 182-1]
 gi|300951544|ref|ZP_07165378.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 116-1]
 gi|300956564|ref|ZP_07168845.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 175-1]
 gi|301327710|ref|ZP_07220916.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 78-1]
 gi|301645561|ref|ZP_07245491.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 146-1]
 gi|307138587|ref|ZP_07497943.1| cystine transporter subunit [Escherichia coli H736]
 gi|309795970|ref|ZP_07690383.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 145-7]
 gi|81245023|gb|ABB65731.1| putative periplasmic binding transport protein [Shigella boydii
           Sb227]
 gi|110615441|gb|ABF04108.1| putative periplasmic binding transport protein [Shigella flexneri 5
           str. 8401]
 gi|187429586|gb|ACD08860.1| cystine-binding periplasmic protein [Shigella boydii CDC 3083-94]
 gi|188486898|gb|EDU62001.1| cystine-binding periplasmic protein [Escherichia coli 53638]
 gi|190901681|gb|EDV61437.1| cystine-binding periplasmic protein [Escherichia coli B7A]
 gi|192925981|gb|EDV80627.1| cystine-binding periplasmic protein [Escherichia coli E22]
 gi|192955541|gb|EDV86020.1| cystine-binding periplasmic protein [Escherichia coli E110019]
 gi|194412010|gb|EDX28322.1| cystine-binding periplasmic protein [Escherichia coli B171]
 gi|194421476|gb|EDX37490.1| cystine-binding periplasmic protein [Escherichia coli 101-1]
 gi|218361272|emb|CAQ98856.1| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218432512|emb|CAR13405.1| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222033661|emb|CAP76402.1| Cystine-binding periplasmic protein [Escherichia coli LF82]
 gi|257759471|dbj|BAI30968.1| putative periplasmic binding transport protein FliY [Escherichia
           coli O103:H2 str. 12009]
 gi|291323132|gb|EFE62560.1| cystine transporter subunit [Escherichia coli B088]
 gi|291427614|gb|EFF00641.1| cystine transporter subunit [Escherichia coli FVEC1412]
 gi|291432879|gb|EFF05858.1| cystine transporter subunit [Escherichia coli B185]
 gi|291470747|gb|EFF13231.1| cystine transporter subunit [Escherichia coli B354]
 gi|298278492|gb|EFI20006.1| cystine transporter subunit [Escherichia coli FVEC1302]
 gi|300316627|gb|EFJ66411.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 175-1]
 gi|300357211|gb|EFJ73081.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 198-1]
 gi|300415408|gb|EFJ98718.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 115-1]
 gi|300418832|gb|EFK02143.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 182-1]
 gi|300449219|gb|EFK12839.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 116-1]
 gi|300528828|gb|EFK49890.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 107-1]
 gi|300845754|gb|EFK73514.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 78-1]
 gi|301076170|gb|EFK90976.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 146-1]
 gi|308120420|gb|EFO57682.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 145-7]
 gi|320176076|gb|EFW51144.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Shigella dysenteriae CDC 74-1112]
 gi|320184749|gb|EFW59541.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Shigella flexneri CDC 796-83]
 gi|323158596|gb|EFZ44610.1| cystine-binding periplasmic protein [Escherichia coli E128010]
 gi|323174566|gb|EFZ60187.1| cystine-binding periplasmic protein [Escherichia coli LT-68]
 gi|323378203|gb|ADX50471.1| extracellular solute-binding protein family 3 [Escherichia coli
           KO11]
 gi|323940417|gb|EGB36608.1| extracellular solute-binding protein 3 [Escherichia coli E482]
 gi|323948199|gb|EGB44187.1| bacterial extracellular solute-binding protein 3 [Escherichia coli
           H120]
 gi|323961969|gb|EGB57568.1| extracellular solute-binding protein 3 [Escherichia coli H489]
 gi|323972717|gb|EGB67918.1| extracellular solute-binding protein 3 [Escherichia coli TA007]
 gi|324118974|gb|EGC12863.1| extracellular solute-binding protein 3 [Escherichia coli E1167]
 gi|332089654|gb|EGI94756.1| cystine-binding periplasmic protein [Shigella boydii 5216-82]
 gi|332096708|gb|EGJ01699.1| cystine-binding periplasmic protein [Shigella boydii 3594-74]
          Length = 266

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|315617857|gb|EFU98455.1| cystine-binding periplasmic protein [Escherichia coli 3431]
          Length = 266

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L++        +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVVGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|300311002|ref|YP_003775094.1| amino acid ABC transporter/signal transduction system periplasmic
           protein/domain-containing protein [Herbaspirillum
           seropedicae SmR1]
 gi|300073787|gb|ADJ63186.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 279

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 83/255 (32%), Gaps = 12/255 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60
            K      L +           A  L +I+ RG L C                    GFD
Sbjct: 8   IKRMGKGSLLVACAALFPGLAQADRLAEIQARGTLVCATLANNEPLGFPDPQSRQVVGFD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD C A++  +     +     +  + R  AL   Q D++S    +T  RE +  + F  
Sbjct: 68  VDMCAAVARRLGVQMEQ---KSVTVEGRLPALIEGQADLVSAALGYT--RERARQIDFTA 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I+    G++ +S L+   I     +T E  +               F    
Sbjct: 123 SHYQNPIKLIVQSDSGLNLISDLADKRISANRSSTPEQAVRRVLPKAM----LQTFADTP 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A    R D     + +   ++  N+       +   +S  P A  + +G+    + 
Sbjct: 179 QAFLALAQGRADGLAISMPS--GIRFVNESAGRFKFVEGALSWEPTALGVKKGERRLRDA 236

Query: 241 VSWTHYAMVTAEELG 255
           V+    A+    E+ 
Sbjct: 237 VNAALAALEKDGEID 251


>gi|168069941|ref|XP_001786633.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660828|gb|EDQ48553.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 542

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 11/209 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                L  IK+ G ++ G       F          GF+VD   A++  +   P    ++
Sbjct: 18  AQVRTLDQIKRSGEIRIGTEGAFPPFNYFDEKNQLTGFEVDLGNAIAQKLGLKP---VWI 74

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                   + L   + D +  +   T  R     + F    Y  G   +  K     +  
Sbjct: 75  TQAFDSLLIQLNQGRFDFVIASHGITEERAK--AVDFTNPHYCTGGVIVSKKGGP-KTAK 131

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  + VQ GTT                    +++  +      + R DA+  D    
Sbjct: 132 DLQGKVVGVQIGTTYMEAAQKIPGIK----QVRTYQKDPDALQDLLSGRLDAWITDRFV- 186

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAI 230
               +   +    + L +++    LA A+
Sbjct: 187 AKEAIKERKLENTLQLGELVGPERLAVAL 215


>gi|317486180|ref|ZP_07945019.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316922571|gb|EFV43818.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 250

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 23/247 (9%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +    +  ++L  I L   + +              L  GI+     FA V   G   
Sbjct: 1   MKRIALRWLGALLLSITLAAPALAAG----------KHLINGIDANYPPFAYVDETGKPA 50

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD    ++  +      +++ P++      AL +K+ID++      +  R+      
Sbjct: 51  GFDVDSMNWIAKKMG---FTVEHKPMDWDGIIPALLAKKIDMVCSGMSISPERKA--QAN 105

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    +   + FI  K   ++     +G   + VQ GT     L          Y    +
Sbjct: 106 FSDPYWTIRKIFITKKGSKVTEDQIYNGKIKLGVQRGTNEHEMLQKAQAEKKYNYQLRFY 165

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D  A     +   +P + V +           AI + D E
Sbjct: 166 DSGPMAIEDLLNGRIDAIGLDA-APAEDAMRKGKPVQEVGV---FGSDEFGVAIRKDDAE 221

Query: 237 WYNIVSW 243
              +V+ 
Sbjct: 222 TMKLVNE 228


>gi|26248187|ref|NP_754227.1| cystine transporter subunit [Escherichia coli CFT073]
 gi|91211139|ref|YP_541125.1| cystine transporter subunit [Escherichia coli UTI89]
 gi|117624062|ref|YP_852975.1| cystine transporter subunit [Escherichia coli APEC O1]
 gi|237705876|ref|ZP_04536357.1| cystine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
 gi|253773127|ref|YP_003035958.1| cystine transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|331647513|ref|ZP_08348605.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli M605]
 gi|26108591|gb|AAN80794.1|AE016762_47 Cystine-binding periplasmic protein precursor [Escherichia coli
           CFT073]
 gi|91072713|gb|ABE07594.1| cystine-binding periplasmic protein precursor [Escherichia coli
           UTI89]
 gi|115513186|gb|ABJ01261.1| cystine-binding periplasmic protein precursor [Escherichia coli
           APEC O1]
 gi|226900633|gb|EEH86892.1| cystine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
 gi|253324171|gb|ACT28773.1| extracellular solute-binding protein family 3 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260448963|gb|ACX39385.1| extracellular solute-binding protein family 3 [Escherichia coli
           DH1]
 gi|331043237|gb|EGI15375.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli M605]
          Length = 285

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 33  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 93  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 148 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261

Query: 245 H 245
            
Sbjct: 262 I 262


>gi|227891534|ref|ZP_04009339.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741]
 gi|227866681|gb|EEJ74102.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741]
          Length = 276

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 94/254 (37%), Gaps = 18/254 (7%)

Query: 1   MY---KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M    K   +    L+I F  +       A+I    ++   +  G+      F  +    
Sbjct: 1   MKNLRKVTLLFSALLMIFFLGACGKKDKAANIAQRTEQTKTVTWGVKADTRLFGLMNIKT 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  +GFDVD  + L+  ++   +K++ +   AK +   L+++ ID +      T  R   
Sbjct: 61  GQIEGFDVDMAKTLTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAVIAAMTITPERRKI 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKY 171
             + F    +  GQ  ++ +   + +V  L+  G  +    GTT    +  +        
Sbjct: 121 --VEFSQPYFAAGQSLLVPENSTVKNVHDLNKKGMVVLAVKGTTAVANIHKFAPKAK--- 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F+   +   A ++ +  A + D   L  +    + P  + ++    +  P   A+ 
Sbjct: 176 -VLEFDDYGQAFTALKSGQGQAMSTDNGILAGIAS--ENPG-YQVVGGNFTNEPYGIAVD 231

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    +    
Sbjct: 232 KGQTQMMKRIDKAL 245


>gi|221231046|ref|YP_002510198.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|220673506|emb|CAR67982.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae ATCC 700669]
          Length = 268

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K       L ++   F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   MKKVLMTMFGLVMLPQLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   +  +       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V  T   +  + EL 
Sbjct: 235 KELKEAVDKTIQKLKESGELD 255


>gi|220923582|ref|YP_002498884.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219948189|gb|ACL58581.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 275

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 81/251 (32%), Gaps = 12/251 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                L          +  A+   +IK RG +  G+ T    F    A+    G+DVD  
Sbjct: 15  MLAGGLAAACGPIGPRAAAAATPDEIKARGRIVIGVLTDYPPFGGTDADQKPAGYDVDVA 74

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R  + ++  +   ++ +P+    R   L + ++D+L      T  R  S  + F      
Sbjct: 75  RLFAKSLGVE---LELVPVTGPNRIPYLLTNKVDMLIATFGITAER--SKQVLFSNPYSA 129

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                +  K   ++    L G +I V   +T +  ++            + F+       
Sbjct: 130 LSTYVLGPKSLAVAKPEDLKGVTIGVARASTQDTAVSAVAP---PGTRIMRFDDDATTTQ 186

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSW 243
           A  + +  +     + L  L       +   I P    K      A  + DT   +  + 
Sbjct: 187 ALISGQVQSIGASNTVLAQL---TKDYASLGIEPKFNLKEQANGMAFRKADTALRDRANA 243

Query: 244 THYAMVTAEEL 254
               +    EL
Sbjct: 244 FIAEIAGNGEL 254


>gi|148984844|ref|ZP_01818097.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|168487566|ref|ZP_02712074.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|147922866|gb|EDK73982.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|183569635|gb|EDT90163.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|301800337|emb|CBW32966.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus pneumoniae OXC141]
          Length = 278

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTNLVKKINEA 247


>gi|149008123|ref|ZP_01831654.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|307126933|ref|YP_003878964.1| glutamine ABC transporter substrate-binding protein [Streptococcus
           pneumoniae 670-6B]
 gi|147760429|gb|EDK67407.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|306483995|gb|ADM90864.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae 670-6B]
          Length = 282

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 5   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 64

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 65  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 119

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 120 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 179

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 180 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 239

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 240 EDTNLVKKINEA 251


>gi|291616413|ref|YP_003519155.1| FliY [Pantoea ananatis LMG 20103]
 gi|291151443|gb|ADD76027.1| FliY [Pantoea ananatis LMG 20103]
          Length = 280

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 104/269 (38%), Gaps = 25/269 (9%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +  A  L DI+KRG L+  +      F  V  +   +G+D+D  + L+  +     K+
Sbjct: 37  AGNVLADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKL 93

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           Q +P+ +  R   LQ+ ++D++  +      RE    + F         G    K   + 
Sbjct: 94  QLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKV--IDFSRAYAPFFLGVFGPKGDHLK 151

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + LSG S+ V  G   ++ L++             +E      +AY + +        
Sbjct: 152 DAAALSGKSVGVTRGAVEDMVLSEVAPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGN 208

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
             + A+  T   P++  +   ++  SP    + + +    + V+          E GI  
Sbjct: 209 LVVAAI--TRQNPAKAPVAQFMLKDSPCYIGLKKDEPALKDKVNTLI-------EQGIKD 259

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
             +N++S++        +L     +N+G 
Sbjct: 260 GTLNKMSEE--------WLKAPLPANLGA 280


>gi|262165971|ref|ZP_06033708.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
 gi|262171174|ref|ZP_06038852.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
 gi|261892250|gb|EEY38236.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
 gi|262025687|gb|EEY44355.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
          Length = 258

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 1   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +  +    + +P +      +L +++ D +      T  R+    + F  
Sbjct: 52  VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   +I  K   +  +   L G  I VQ  TT +  ++D +         + +   
Sbjct: 107 KYALIPNKYIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++           A+ + D
Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQD 223

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    ++
Sbjct: 224 KDLTEKLNAAITSL 237


>gi|300722507|ref|YP_003711797.1| arginine ABC transporter periplasmic-binding protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629014|emb|CBJ89599.1| arginine transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 245

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 91/247 (36%), Gaps = 23/247 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F ++L ++ L  T+            ++  L+         F  +  N   +GFD
Sbjct: 1   MKKLLFTALLSVMALSATAA-----------EKTTLRFATEATYPPFEFIDTNNKIQGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   I    S+  +          +L+ ++ D L    D T  R+    + F  
Sbjct: 50  IDLTNAICEKI---NSECTFTNQAFDSLIPSLKFRRFDALMAGIDITPERQK--QVDFTH 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K    S+++ L    I +Q GTT +  L +  K        + ++  +
Sbjct: 105 TYYDNSAIFIAIKG-KFSNIADLKNKQIGIQNGTTHQKYLMEQHKE----IKTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + ++     N       + +       + L  A+ +G+TE  
Sbjct: 160 NAILDLKNGRIDAVFGDTAVVHEWLRKNKELVTIGNKVTDKNYFGTGLGIAVRKGNTELL 219

Query: 239 NIVSWTH 245
           N ++   
Sbjct: 220 NKLNKAL 226


>gi|51595216|ref|YP_069407.1| amino acid ABC transporter, periplasmic protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|153950109|ref|YP_001402150.1| amino acid ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|170025546|ref|YP_001722051.1| extracellular solute-binding protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186894233|ref|YP_001871345.1| extracellular solute-binding protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|51588498|emb|CAH20106.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|152961604|gb|ABS49065.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|169752080|gb|ACA69598.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis YPIII]
 gi|186697259|gb|ACC87888.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis PB1/+]
          Length = 262

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 91/244 (37%), Gaps = 12/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K        L+++   + +  A  L  I++RG L+  +      F  V  +   +G+D+
Sbjct: 4   KKRMLWLWAVLVLV--QAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    +AF   
Sbjct: 62  DMAQYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSRA 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   +    QL+G +I V  G   ++ L++             +E    
Sbjct: 117 YAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKA---AQIRRYEDNNT 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + + +        + AL      P +  +   ++  SP    + QG+      V
Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231

Query: 242 SWTH 245
               
Sbjct: 232 DALI 235


>gi|301169821|emb|CBW29425.1| cystine transporter subunit [Haemophilus influenzae 10810]
          Length = 257

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 61  VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G         +         KA       +V + +
Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDTLIT 228

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 229 KFNQVLEAL 237


>gi|197250151|ref|YP_002146069.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197213854|gb|ACH51251.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 266

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 14/247 (5%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            +     +   ++   ++ S  +  +L  +K+RG L  G+      F+    +G   GF+
Sbjct: 8   RRALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  AL+  +          P        +L +K+ID++      + +R+      F  
Sbjct: 68  VDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK--KYDFST 122

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                G   ++ K     I + + L G  + V  GT  E  L  +            ++ 
Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGVDIRTYDD 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                   R  R DA   D   L AL L         +  D  S+     A+ +G+ +  
Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236

Query: 239 NIVSWTH 245
             V    
Sbjct: 237 KAVDNAI 243


>gi|149021767|ref|ZP_01835774.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|168483890|ref|ZP_02708842.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|168493400|ref|ZP_02717543.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|168575956|ref|ZP_02721871.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|169833700|ref|YP_001694907.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|194397294|ref|YP_002038130.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae
           G54]
 gi|225854943|ref|YP_002736455.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|147930003|gb|EDK80990.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|168996202|gb|ACA36814.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|172042794|gb|EDT50840.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|183576536|gb|EDT97064.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|183578212|gb|EDT98740.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|194356961|gb|ACF55409.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae G54]
 gi|225723790|gb|ACO19643.1| ABC transporter substrate-binding protein - glutamine transport
           [Streptococcus pneumoniae JJA]
          Length = 278

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTTLVKKINEA 247


>gi|229163090|ref|ZP_04291046.1| Arginine-binding extracellular protein artP [Bacillus cereus
           R309803]
 gi|228620496|gb|EEK77366.1| Arginine-binding extracellular protein artP [Bacillus cereus
           R309803]
          Length = 259

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K    L  G +     +  V+A+   +  G
Sbjct: 1   MKKFLSISFALILIVSMFSACSNGEEKATEKNEKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|16273008|ref|NP_439237.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae Rd KW20]
 gi|145636468|ref|ZP_01792136.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae PittHH]
 gi|260580165|ref|ZP_05847995.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae RdAW]
 gi|1723181|sp|P45024|Y1080_HAEIN RecName: Full=Probable amino-acid ABC transporter-binding protein
           HI_1080; Flags: Precursor
 gi|1574634|gb|AAC22736.1| amino acid ABC transporter, periplasmic-binding protein
           [Haemophilus influenzae Rd KW20]
 gi|145270293|gb|EDK10228.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae PittHH]
 gi|260093449|gb|EEW77382.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae RdAW]
          Length = 257

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 61  VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G         +         KA       +V + +
Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 229 KFNQVLEAL 237


>gi|319761716|ref|YP_004125653.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|317116277|gb|ADU98765.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
          Length = 277

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 14/267 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77
           S S  A  L DIK +G L CG+      F+       + +G+DVDFC A++ ++      
Sbjct: 24  STSAMADQLADIKAKGSLVCGVLGTSKPFSFPNPQTREIQGYDVDFCSAVAKSLGVK--- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++  P++   R   L  K+ID+++ N  WT  R  +  +A+    Y   Q   + +    
Sbjct: 81  LEIKPISVAARIPELTQKRIDVIAANLGWTAER--AQQIAYSDAYYVALQKVAVKRGAFA 138

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S + L+G  +    G+T+E+ +  +         P+ F+       A +  + D +   
Sbjct: 139 RS-TDLAGKRVSATKGSTSEIAIRAFLPTA----TPVTFQDPPPAFLALQQGKVDGFVVT 193

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
              L  LK  ++      IL   +++      + + +T     V+ T   M  + E    
Sbjct: 194 EMVLVQLKAQSEADHPIDILEPPLAEEFWGIGMRKEETALSGHVNKTLRQMEASGE---A 250

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSN 284
            +  ++     T+  ++R   +     
Sbjct: 251 ARIFDKWMGAGTDFKMKRGFVVKPVQG 277


>gi|294083879|ref|YP_003550636.1| putative ABC transporter periplasmic amino acid-binding protein
           [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663451|gb|ADE38552.1| putative ABC transporter periplasmic amino acid-binding protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 275

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 5/198 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    + L L +   T     A  L D+   G ++CG+           AN +  GFDV+
Sbjct: 9   KMAVCASLALSLALTTGTVAQADKLDDVIDNGKVRCGVVLDFPPIGYRDANNEPAGFDVE 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           +C+ L++A+  D   I    L   ER  ++ S + D++   T  TL R  ++G  F    
Sbjct: 69  YCKDLATAMDVDYEIIP---LTWAERLPSIVSNRADVVFGGTSDTLERAKTVG--FTIPY 123

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                  ++ K+ GI+S + + G  +    GT  E+      K    +     F+   E+
Sbjct: 124 AIYYAQAVVTKESGITSFADMKGKRVGAAVGTVPEIEFLKIAKEWGTENLYQGFQSENEV 183

Query: 183 DAAYRAHRCDAYTGDISA 200
             A    + DA     +A
Sbjct: 184 FLAVAQGKIDAGITTNTA 201


>gi|148988545|ref|ZP_01819978.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|147925746|gb|EDK76821.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|301794513|emb|CBW36955.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus pneumoniae INV104]
          Length = 278

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTTLVKKINEA 247


>gi|68249637|ref|YP_248749.1| amino-acid ABC transporter binding protein [Haemophilus influenzae
           86-028NP]
 gi|145630171|ref|ZP_01785953.1| CTP synthetase [Haemophilus influenzae R3021]
 gi|145638106|ref|ZP_01793716.1| probable amino-acid ABC transporter binding protein [Haemophilus
           influenzae PittII]
 gi|148826306|ref|YP_001291059.1| amino-acid ABC transporter binding protein [Haemophilus influenzae
           PittEE]
 gi|148828242|ref|YP_001292995.1| CTP synthetase [Haemophilus influenzae PittGG]
 gi|319776667|ref|YP_004139155.1| Bacterial extracellular solute-binding protein [Haemophilus
           influenzae F3047]
 gi|68057836|gb|AAX88089.1| probable amino-acid ABC transporter binding protein [Haemophilus
           influenzae 86-028NP]
 gi|144984452|gb|EDJ91875.1| CTP synthetase [Haemophilus influenzae R3021]
 gi|145272435|gb|EDK12342.1| probable amino-acid ABC transporter binding protein [Haemophilus
           influenzae PittII]
 gi|148716466|gb|ABQ98676.1| probable amino-acid ABC transporter binding protein [Haemophilus
           influenzae PittEE]
 gi|148719484|gb|ABR00612.1| CTP synthetase [Haemophilus influenzae PittGG]
 gi|309751272|gb|ADO81256.1| L-cystine ABC transporter, periplasmic-binding protein TcyA
           [Haemophilus influenzae R2866]
 gi|309973449|gb|ADO96650.1| L-cystine ABC transporter, periplasmic-binding protein TcyA
           [Haemophilus influenzae R2846]
 gi|317451258|emb|CBY87492.1| Bacterial extracellular solute-binding protein [Haemophilus
           influenzae F3047]
          Length = 257

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 61  VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G         +         KA       +V + +
Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKKHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 229 KFNQVLEAL 237


>gi|254387277|ref|ZP_05002537.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1]
 gi|194346082|gb|EDX27048.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1]
          Length = 276

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++   I +  T+          I        GI     G    + +G + GFD
Sbjct: 9   MKVSKAGAVAATIAVALTASGCAEDAKEPIA------IGIKFDQPGIGFREQDGTFTGFD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +    ++I++  + + +R L +Q  ++D ++ +   +  R+    + F  
Sbjct: 63  VDVATYVAKQLGYKANEIEFKQVFSSDRELLIQYNEVDFVAASYSISDKRKE--KVDFAG 120

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  ++      ++    L+   +C   G+T+    A+  KA   K   +  E  
Sbjct: 121 PYFIAHQDLLVRADDASVTKAEDLNSKKLCSVTGSTS----AEKVKALAPKASVMELEGY 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +    DA T D S L       +   +  ++   +S       + +G+ E   
Sbjct: 177 SECLVAVQDGSADAMTTDNSILAGYAARKENAGKFKLIGLSLSNENYGIGVKKGNKELQK 236

Query: 240 IVSWTHYAMVT 250
            ++     MVT
Sbjct: 237 KINAALTKMVT 247


>gi|304398231|ref|ZP_07380105.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
 gi|304354097|gb|EFM18470.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
          Length = 260

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 78/250 (31%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    S              G ++ G +     F    A G   GFD
Sbjct: 1   MKKRVLALSLMLGLSSAASVFAAVP--------GSIRIGTDPTYPPFESKDAQGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I    ++  Y+  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLANEICKRI---HTQCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   I  ++  L G +I +  GTT E      ++   +   P  +   
Sbjct: 108 KLYAANARLVAPKGSKIQPTIESLKGKNIGLLQGTTQETYANQNWRPKGVNVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D        L       +      +    +        + + D
Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPAVKDDKIFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWT 244
           +E    +   
Sbjct: 226 SELKAAIDKA 235


>gi|256787709|ref|ZP_05526140.1| sugar-binding protein [Streptomyces lividans TK24]
          Length = 334

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%)

Query: 16  FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67
                  +   +  I+ R      L  G++     +     N     + +GFD+D    +
Sbjct: 58  TLAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRI 117

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  D   +Q+  +   +R  A+Q  ++D++ R        +    +AF    +  GQ
Sbjct: 118 AKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQ 175

Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183
             +  K   I+     L+G  IC  AG+T   TL    K   +              +  
Sbjct: 176 QVLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCL 235

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +   +    +       +  D  +      A+ +   +    V+ 
Sbjct: 236 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGDAFTTEYYGVAMKKDADDLVRRVNR 292

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
                  A+     Q +  +   +T +   +  
Sbjct: 293 VLEQW-RADRADGWQHSYEEWLSETMDDPAKSL 324


>gi|309789346|ref|ZP_07683936.1| cystine-binding periplasmic protein [Shigella dysenteriae 1617]
 gi|308922740|gb|EFP68257.1| cystine-binding periplasmic protein [Shigella dysenteriae 1617]
 gi|332095482|gb|EGJ00498.1| cystine-binding periplasmic protein [Shigella dysenteriae 155-74]
          Length = 252

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 13/240 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + L
Sbjct: 1   MAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQL 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +       P        +L SK+ID++      +  R+      F       G 
Sbjct: 61  AKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISGI 115

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             ++ K     I + + L G  + V  GT  E    ++ + +        ++        
Sbjct: 116 QALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQD 171

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+   
Sbjct: 172 LRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAI 229


>gi|229120016|ref|ZP_04249271.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           95/8201]
 gi|228663482|gb|EEL19067.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           95/8201]
          Length = 264

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGKKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|56414070|ref|YP_151145.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362993|ref|YP_002142630.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128327|gb|AAV77833.1| glutamine-binding periplasmic protein precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197094470|emb|CAR59987.1| glutamine-binding periplasmic protein precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 248

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 81/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  +  
Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNINN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  E    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|325523433|gb|EGD01757.1| polar amino acid transporter substrate-binding protein
           [Burkholderia sp. TJI49]
          Length = 266

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 77/235 (32%), Gaps = 14/235 (5%)

Query: 17  FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSQPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRDFKSLEDFKGKKLGVTLGTNY-----DQMARAVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              D   +    +                K  +A    +G+ ++   ++    ++
Sbjct: 189 TLDDR-LMLPYMIKTSNLPLRPGAVLNGGKQEMAIPFRKGNPKFEKAINDALTSL 242


>gi|189404437|ref|ZP_02789465.2| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189365555|gb|EDU83971.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4501]
          Length = 285

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + LI         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 33  VMAVALIAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 93  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 148 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261

Query: 245 H 245
            
Sbjct: 262 I 262


>gi|16801415|ref|NP_471683.1| hypothetical protein lin2352 [Listeria innocua Clip11262]
 gi|16414875|emb|CAC97579.1| lin2352 [Listeria innocua Clip11262]
          Length = 486

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 101/279 (36%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I  F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K      +SV+  +G  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQEELAKNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   Q   N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQNEANKLM 269


>gi|228992898|ref|ZP_04152823.1| Arginine-binding extracellular protein artP [Bacillus
           pseudomycoides DSM 12442]
 gi|228998943|ref|ZP_04158526.1| Arginine-binding extracellular protein artP [Bacillus mycoides
           Rock3-17]
 gi|229006474|ref|ZP_04164127.1| Arginine-binding extracellular protein artP [Bacillus mycoides
           Rock1-4]
 gi|228754787|gb|EEM04179.1| Arginine-binding extracellular protein artP [Bacillus mycoides
           Rock1-4]
 gi|228760818|gb|EEM09781.1| Arginine-binding extracellular protein artP [Bacillus mycoides
           Rock3-17]
 gi|228766947|gb|EEM15585.1| Arginine-binding extracellular protein artP [Bacillus
           pseudomycoides DSM 12442]
          Length = 261

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 12/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKAN--GDW 56
           M K   +S   ++I+   S  +          K +  L  G +     +  V+A+   + 
Sbjct: 1   MKKLLSISFALILIISMFSACSKGETKESNTKKDKKVLVMGTSADYKPYEYVEASKSDEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  + +   +  +   ++   ++      +L S ++D +      T  R+     
Sbjct: 61  IGFDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTPERKG--NA 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  I +      +  K  GI S+  L G  + VQ G+  E    ++ K  N +      
Sbjct: 116 DFTDIYFVAKNMIVSKKDSGIKSLQDLEGKKVGVQTGSIQEEKANEFNKQVNFQAEGR-- 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +R+ EI    +A R DA   + +             + + + +   +   A A+ +   +
Sbjct: 174 DRIPEIVQEIQAGRFDAAILEDTVAKNYLEKIK-GLQGIEIQEAPEEVGAAIALPKNSDK 232

Query: 237 WYNIVSWTHYAMVTAE 252
                          E
Sbjct: 233 TAEFNKVIKKMQENGE 248


>gi|325062401|gb|ADY66091.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Agrobacterium sp. H13-3]
          Length = 277

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 81/220 (36%), Gaps = 9/220 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            D+K R  L  G+      +  +   G+  GF+V+  + ++  +     KI+++P+ A  
Sbjct: 31  DDVKARDKLIVGVKNDYPPYGYLNDKGEIIGFEVELAKYVAKELLGSSDKIEFVPVVAAN 90

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGA 146
           R   L + +ID +      T  R+    + F            +M K+   S   +L G 
Sbjct: 91  RIEFLTAGRIDAIFATLGVTPERDKV--IDFTTAYVSSPGPAVMMAKEATTSKWEELKGK 148

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +C   G+     + + F         + F+   E   A R +RC  +  D   L  LK+
Sbjct: 149 PVCGIQGSYYNKKMTEEF-----GIQLVAFKTQPEAMRALRDNRCVGFVFDQMTL-DLKV 202

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                  + +        P+A  I +GD  +   V     
Sbjct: 203 QEADWKGYKVAVPTYEYLPMAGGIREGDKAFQEAVDKAIT 242


>gi|253991466|ref|YP_003042822.1| amino acid ABC transporter [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782916|emb|CAQ86081.1| similar to amino acid abc transporter [Photorhabdus asymbiotica]
          Length = 257

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 76/246 (30%), Gaps = 14/246 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K FF ++L  +I F    S +A S L  IK  G  K         F    A+G   GFDV
Sbjct: 2   KVFFTALLAGVIQFGIVHSASAESSLDKIKSTGVFKIATEGTYPPFTYHDASGTLTGFDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  R ++  +        +           L +K+ D +      T  R+      F   
Sbjct: 62  EIGREIAHRLNVKAE---FTEGKWDGLIAGLDAKRYDAVINQVAITPERKK--KYDFSAP 116

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   I  +    I + S L G +    + T+    LA  F A       +  E   
Sbjct: 117 YIISKAVLITRQNNDSIKTFSDLKGKTSS-HSLTSNYAQLAKRFGA-----EIVPTEGFN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        R DA   D  +    K         V+  +      +   I +G+ E    
Sbjct: 171 QAIDLVATGRADATINDNLSYLDFKKHKPNAPVKVVASEPNGDQ-VGILIRKGEPELQAA 229

Query: 241 VSWTHY 246
           +     
Sbjct: 230 IDKALT 235


>gi|153011032|ref|YP_001372246.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562920|gb|ABS16417.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 253

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  + L     +         K+   ++         F  +  +G  +GFD
Sbjct: 1   MLKSVLLAGLASVFLALPVQA---------KEWKEIRIASEGAYPPFNYMSPDGKLEGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +       LQ+ + D +  +   T  RE  +   F  
Sbjct: 52  LDIANALCKAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITEEREKQVA--FTE 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K   ++S   S   G ++  QAGTT      D +          ++  
Sbjct: 107 RYYTTPLAVVVPKDTDMTSLDPSAFDGKTVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A   + R DA   D                  +     S++ +A A+ +GD +  
Sbjct: 165 ADEANADLESGRLDAIAADKFLAADWLKKQGANCCKFLGDIPGSETKIAVALRKGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|148997439|ref|ZP_01825044.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|307068145|ref|YP_003877111.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|147756494|gb|EDK63535.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|306409682|gb|ADM85109.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
          Length = 278

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTTLVKKINEA 247


>gi|62180528|ref|YP_216945.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62128161|gb|AAX65864.1| putative periplasmic binding transport protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|322715004|gb|EFZ06575.1| cystine-binding periplasmic protein precursor [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 252

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 81/240 (33%), Gaps = 13/240 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             + L+         +  +L  +K+RG L  G+      F+    +G   GF+VDF  AL
Sbjct: 1   MAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEAL 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +          P        +L SK+ID++      + +R+      F       G 
Sbjct: 61  AKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK--KYDFSTPYTVSGV 115

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             ++ K     I + + L G  + V  GT  E  L  +            ++        
Sbjct: 116 QALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGVDIRTYDDDPTKYQD 171

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R  R DA   D   L AL L         +  D  S+     A+ +G+ +    V    
Sbjct: 172 LRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAI 229


>gi|313617589|gb|EFR89902.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua
           FSL S4-378]
          Length = 486

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 101/279 (36%), Gaps = 24/279 (8%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I  F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K      +SV+  +G  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQEELAKNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKE-T 230

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           A A+ +G T     V+ +   +     L   Q   N++ 
Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQNEANKLM 269


>gi|264679052|ref|YP_003278959.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni CNB-2]
 gi|262209565|gb|ACY33663.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas
           testosteroni CNB-2]
          Length = 303

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 6/232 (2%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS---SAIFDDPSKIQYL 81
            L  I+  G +  G+       +    NG + GF V+ C +AL+     +     +I+Y 
Sbjct: 20  TLDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLEIRYQ 79

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + A+ R   + +  +D+    T     R+  +   F P  Y +     + K  GI+ V+
Sbjct: 80  MVTAQNRVPLVANGTVDVECGTTTNNAARQKEVA--FAPTVYMEEVRTAVRKSSGITEVA 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           QL G  +    G T    L  + K   + ++ ++ +   E        R DA   D   L
Sbjct: 138 QLKGRKVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFVLLETGRADACVADGQIL 197

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            +       P ++ I+ +  S  P+A  + +   E+  +       M ++ E
Sbjct: 198 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIREMASSGE 249


>gi|258626820|ref|ZP_05721627.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
 gi|258580867|gb|EEW05809.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
          Length = 260

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    +   + +         K+   ++ GI      F+  +A+G  KGFD
Sbjct: 3   MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +  +    + +P +      +L +++ D +      T  R+    + F  
Sbjct: 54  VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   +I  K   +  +   L G  I VQ  TT +  ++D +         + +   
Sbjct: 109 KYALIPNKYIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E        R  A  GD SAL    L       +  +   ++           A+ + D
Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQD 225

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    ++
Sbjct: 226 KDLTEKLNAAITSL 239


>gi|37525534|ref|NP_928878.1| arginine-binding periplasmic protein 1 precursor [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784962|emb|CAE13880.1| Arginine-binding periplasmic protein 1 precursor [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 244

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 93/247 (37%), Gaps = 23/247 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F ++L  + L  T+         +I     ++         F  + AN   +GFD
Sbjct: 1   MKKLLFAALLGTVALSATA------TEKEI-----IRFATEATYPPFEFIDANNKIQGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +   +      +L+ ++ D L+   D T  R+    + F  
Sbjct: 50  VDLANAICEKI---NATCTFTNQSFDSLIPSLKFRRFDALAAGIDITPERQK--QVDFTN 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   +SS ++L G  + +Q GTT +  L +  K        + ++  +
Sbjct: 105 TYYDNSAVFISVKG-KVSSTAELKGKLVGIQNGTTHQKYLMEQRKE----IKTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N+  S   + +         L  A+ +G+ +  
Sbjct: 160 NAILDLKNGRLDAVFGDTAVVNEWLKKNENLSTVGNKVTDKNYFGIGLGIAVRKGNKDLQ 219

Query: 239 NIVSWTH 245
           + ++   
Sbjct: 220 DKLNKAL 226


>gi|323180829|gb|EFZ66369.1| cystine-binding periplasmic protein [Escherichia coli 1180]
          Length = 255

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 3   VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 63  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 117

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 118 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 173

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+      + +G+ +    V+  
Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVTLRKGNEDLLKAVNDA 231

Query: 245 H 245
            
Sbjct: 232 I 232


>gi|319758137|gb|ADV70079.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis JS14]
          Length = 270

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 18/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K   + ++ L  +  ++ S NA+     L D++++G L   +N     F         
Sbjct: 2   MKKYIMMGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 61

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D++  +A+   +  +   +++  ++       +QS Q DI       T  R   
Sbjct: 62  DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 118

Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      I++K+     +S+  L+ A+I  Q G+  E  + +   +     
Sbjct: 119 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 172

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I      E+    ++ + +A   +     A    ND                 A A+ 
Sbjct: 173 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           +G T     V      +V + ++ 
Sbjct: 233 KGSTALKEKVDSVITKLVESGQMD 256


>gi|283784571|ref|YP_003364436.1| glutamine ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
 gi|282948025|emb|CBG87589.1| glutamine ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
          Length = 248

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFD+D
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAVAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV  L G ++ V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKTLAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  +    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDDLREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|253751788|ref|YP_003024929.1| putative extracellular amino acid-binding protein [Streptococcus
           suis SC84]
 gi|253753611|ref|YP_003026752.1| extracellular amino acid-binding protein [Streptococcus suis P1/7]
 gi|253755508|ref|YP_003028648.1| extracellular amino acid-binding protein [Streptococcus suis BM407]
 gi|251816077|emb|CAZ51697.1| putative extracellular amino acid-binding protein [Streptococcus
           suis SC84]
 gi|251817972|emb|CAZ55753.1| putative extracellular amino acid-binding protein [Streptococcus
           suis BM407]
 gi|251819857|emb|CAR45861.1| putative extracellular amino acid-binding protein [Streptococcus
           suis P1/7]
          Length = 269

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 18/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K   + ++ L  +  ++ S NA+     L D++++G L   +N     F         
Sbjct: 1   MKKYIMMGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D++  +A+   +  +   +++  ++       +QS Q DI       T  R   
Sbjct: 61  DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      I++K+     +S+  L+ A+I  Q G+  E  + +   +     
Sbjct: 118 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I      E+    ++ + +A   +     A    ND                 A A+ 
Sbjct: 172 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           +G T     V      +V + ++ 
Sbjct: 232 KGSTALKEKVDSVITKLVESGQMD 255


>gi|170019742|ref|YP_001724696.1| cystine transporter subunit [Escherichia coli ATCC 8739]
 gi|209919342|ref|YP_002293426.1| cystine transporter subunit [Escherichia coli SE11]
 gi|307314173|ref|ZP_07593783.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|331642542|ref|ZP_08343677.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli H736]
 gi|331653328|ref|ZP_08354333.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli M718]
 gi|331677805|ref|ZP_08378480.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli H591]
 gi|169754670|gb|ACA77369.1| extracellular solute-binding protein family 3 [Escherichia coli
           ATCC 8739]
 gi|209912601|dbj|BAG77675.1| cystine-binding periplasmic protein precursor [Escherichia coli
           SE11]
 gi|306906142|gb|EFN36660.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|312946512|gb|ADR27339.1| cystine transporter subunit [Escherichia coli O83:H1 str. NRG 857C]
 gi|315061220|gb|ADT75547.1| cystine transporter subunit [Escherichia coli W]
 gi|331039340|gb|EGI11560.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli H736]
 gi|331049426|gb|EGI21498.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli M718]
 gi|331074265|gb|EGI45585.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli H591]
          Length = 285

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 33  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 93  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 148 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261

Query: 245 H 245
            
Sbjct: 262 I 262


>gi|55821171|ref|YP_139613.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737156|gb|AAV60798.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
          Length = 277

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 27/285 (9%)

Query: 2   YKDFF-----VSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGF 47
           +K        VS++   +   T+  T A           +  I  RG L  G+   +  F
Sbjct: 3   FKKILRYLTAVSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNF 62

Query: 48  AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
               A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L      
Sbjct: 63  GYYSAKTNRYEGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R+ S  +      Y D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  A
Sbjct: 120 NDERKASYAI--SNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSA 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           HN+K++ +      E+  +  AHR DA++ D S L   +    +     IL +       
Sbjct: 178 HNLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDY 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269
             A  + + E  +  +           L     + N+     +  
Sbjct: 233 GIASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277


>gi|293365707|ref|ZP_06612416.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|291316075|gb|EFE56519.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
          Length = 271

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K   V    L  +   +  +    + S +  IK++G L    +     F     V    
Sbjct: 4   KKWILVVCSMLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        +S L+ A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I    + E     +A + DA   D     +    N       +   +      A AI +
Sbjct: 175 LISLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKK 234

Query: 233 GDTEWYNIVSWTHY 246
             ++   +V     
Sbjct: 235 DQSDLKAVVDKVIQ 248


>gi|223933820|ref|ZP_03625788.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
 gi|330833684|ref|YP_004402509.1| extracellular solute-binding protein family 3 [Streptococcus suis
           ST3]
 gi|223897503|gb|EEF63896.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
 gi|329307907|gb|AEB82323.1| extracellular solute-binding protein family 3 [Streptococcus suis
           ST3]
          Length = 267

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 20/221 (9%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   F S+L   I+     S+         ++L  IK+ G ++ G       ++    
Sbjct: 1   MKKIAMFTSLLFAGIVLAACNSSAGISNSTDQTLLAQIKEEGVIQIGTEGAYAPYSYHDE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G+DV+   A++  +      ++++          L + + D ++     T  R+ 
Sbjct: 61  SGKLVGYDVEVAEAVAEKLGVK---VEFVETEWDSMIAGLDAARFDTIANQVGITDERKA 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F     +     +  K    I+S + LSG        +      AD  + +    
Sbjct: 118 --KYDFSTPYTYIYGALVTQKDNTDITSFADLSGKKSANSLTS----NWADLARENG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
             +  +   +        R DA   D          +    
Sbjct: 170 EVVGVDGFSQAVELLNTGRVDATINDNLVYLDYVKQHADAP 210


>gi|332073835|gb|EGI84313.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus pneumoniae GA41301]
          Length = 278

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMNGKTLGAQAGSSGYADFEANPELLKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTTLVKKINEA 247


>gi|317049374|ref|YP_004117022.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316950991|gb|ADU70466.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 278

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 19/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  +  ++  ++   +     A  L DIK  G +  GI+     +     +G   G+ 
Sbjct: 1   MKKTAW--LIAALLSVGSLAQAQADTLADIKSSGKITVGIDPTFPPYEYTDDSGAITGYS 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V   ++ +  +      +++           L S   +    + + T  R     + F  
Sbjct: 59  VAIMQSFAKDLGVK---LEFQKTAFSGILPGLISGSFNAEGSSLNVTAERAK--KVLFTV 113

Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLA----DYFKAHNMK 170
                  G ++ + +  +      S   LSG    V+  +  E  L     +  KA    
Sbjct: 114 PYSKTVNGVLVREDEAKTFSGKTLSPESLSGLRGAVKTASVPEQLLKGFNDELKKAGKKP 173

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  + +++  +     R D    DIS L  +      PS+   + ++     +  A 
Sbjct: 174 ITIISVDSLDQTVSTLMTKRADFVYDDISVLAPVVKKY--PSKVAQVGEVGPSQWMGWAT 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254
            + D      +S    AM    EL
Sbjct: 232 RKEDGSLNKALSDHILAMQKDGEL 255


>gi|229846112|ref|ZP_04466224.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae 7P49H1]
 gi|229811116|gb|EEP46833.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae 7P49H1]
          Length = 257

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L   ++ F++FS    I   +++   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGVIAFSTFSHAGEIADRVEQTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 61  VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G         +         KA       +V + +
Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 229 KFNQVLEAL 237


>gi|313124053|ref|YP_004034312.1| ABC amino acid transport/signal transduction system, periplasmic
           component/domain [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280616|gb|ADQ61335.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 286

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77
             S   S     K+   +  G+      F       G  +GF++D   A++  I    SK
Sbjct: 30  CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
             + P+  K R   L +  +D +      T  R     + F  + +   +  I+ K   I
Sbjct: 90  AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S++ L+   + V A   T+  +A+       K     F+       A +A + D    D
Sbjct: 148 RSIADLNKKGVVVIAIKGTD--VANQVAKLAPKASVKQFDDYGSAFNALKAGQGDVMIDD 205

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              L  L        E  +    +++ P    + +G TE    ++    
Sbjct: 206 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 251


>gi|260868512|ref|YP_003234914.1| putative periplasmic binding transport protein FliY [Escherichia
           coli O111:H- str. 11128]
 gi|257764868|dbj|BAI36363.1| putative periplasmic binding transport protein FliY [Escherichia
           coli O111:H- str. 11128]
          Length = 266

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+      + +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVTLRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|322388044|ref|ZP_08061650.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus infantis ATCC 700779]
 gi|321141065|gb|EFX36564.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus infantis ATCC 700779]
          Length = 280

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K   + ++  +  F    +  AS          +++  +  G +   V     + NG +
Sbjct: 3   RKKISLVLVFFLAFFLVGCTQKASNPKVDNWEKYQQQESITIGFDNTFVPMGFEEKNGQY 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +A+S  +     K+Q+ P++   +   LQ+  ID +      T  R     +
Sbjct: 63  VGFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKV 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173
           AF      + Q  +  K + I SVS ++G  +  QAG++  +      +           
Sbjct: 118 AFTIPYMENQQVLVSKKSQNIQSVSDMTGKVLGAQAGSSGYIDFEARPELLKNIVKDQKA 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             ++   E     +  R DA   D         T     ++ I+P        A  +   
Sbjct: 178 NQYQSFNEALIDLQNDRIDALLIDRVYANYYLETEGILDQYEIIPAGFESESFAVGVRPA 237

Query: 234 DTEWYNIVSWT 244
           D      ++  
Sbjct: 238 DKTLLANLNKA 248


>gi|271498823|ref|YP_003331848.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270342378|gb|ACZ75143.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 256

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L   +L  +  +     L  IK  G +K G       +    A+G   GFD
Sbjct: 1   MKKS-RLALLTGALLVTSVLAQAQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +        ++          + +K+ D +      T  R   +   F  
Sbjct: 60  VDVGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKER--QVKYDFSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I S + L G     Q+ T+    LA  + A       +  +  
Sbjct: 115 PYIDAKSVLIVRGDNSSIKSFNDLKGHKSA-QSLTSNYSKLATSYGA-----EIVPTDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R +A   D  +    K          ++    S  P A  + +   +  +
Sbjct: 169 NQSLELVLSGRAEATLNDNLSFLDFKKHKPDA-NVKVVATAESGDPSAILVRKNQPQLVD 227

Query: 240 IVSWTH 245
            ++   
Sbjct: 228 ALNKAL 233


>gi|313125641|ref|YP_004035911.1| amino acid ABC transporter substrate-binding protein, paat family
           [Halogeometricum borinquense DSM 11551]
 gi|312292006|gb|ADQ66466.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Halogeometricum borinquense DSM 11551]
          Length = 300

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 16/228 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     F     +G+ KGFDV+  +A+         + ++   +      +L S
Sbjct: 63  KVVIGSDIPYRPFEYETTSGELKGFDVEIAQAVFEEELG--VEYEFKKTSFDSIIPSLNS 120

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +  I+         R+    + F    +   Q  I+ K   ISS   L GA+I VQ GT
Sbjct: 121 GRFRIIMSAMTINEKRKE--KVDFSEPYFTAYQTVIIKKDSSISSKEDLKGATIGVQKGT 178

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T      +     +       ++++     A    + DA   D +         D     
Sbjct: 179 TGASAAEELKTEFDGDLTLKKYDQIPSAFQALINGQIDAIVNDNTVNSEFADKRDDVVFL 238

Query: 215 VILPD------------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                             ++         + D E+   V+    A+  
Sbjct: 239 EGEGAAAAEGENAPPYLTLTVENYGIGFRKADDEFRKKVNEALAAVKE 286


>gi|161505143|ref|YP_001572255.1| hypothetical protein SARI_03280 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866490|gb|ABX23113.1| hypothetical protein SARI_03280 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 246

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L  + +   S S              L  G +     +  V A+    GFD
Sbjct: 1   MKKKLIAMLLASLSVHAASVSA-----------KILHFGTSATYAPYEFVDADNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  +   +       L+ ++ D +    D T  RE    ++F  
Sbjct: 50  IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFRKFDAVIAGMDMTPKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K    + + L G  + ++ GTT +  L D  KA      P+ ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQKA----ITPVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-----ISKSPLAPAIIQGDT 235
                 + +R +   GD   + A+        ++ I+ +           L  A+ +G+ 
Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGEGLGIAVRKGND 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 218 ALLQEINAALDKVKASPEYA 237


>gi|149011735|ref|ZP_01832931.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|182684455|ref|YP_001836202.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CGSP14]
 gi|303254161|ref|ZP_07340274.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS455]
 gi|303260723|ref|ZP_07346683.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|303263050|ref|ZP_07348982.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264454|ref|ZP_07350374.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS397]
 gi|303267432|ref|ZP_07353286.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS457]
 gi|303269793|ref|ZP_07355542.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS458]
 gi|147764166|gb|EDK71098.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|182629789|gb|ACB90737.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CGSP14]
 gi|302598887|gb|EFL65920.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS455]
 gi|302635813|gb|EFL66316.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638126|gb|EFL68601.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|302640686|gb|EFL71084.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS458]
 gi|302643023|gb|EFL73316.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS457]
 gi|302646266|gb|EFL76493.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS397]
          Length = 278

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTTLVKKINEA 247


>gi|116751320|ref|YP_848007.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700384|gb|ABK19572.1| extracellular solute-binding protein, family 3 [Syntrophobacter
           fumaroxidans MPOB]
          Length = 252

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 15/264 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V ++C + +     + +      +        GI+     FA V   G   GFD
Sbjct: 1   MGKKVLVCLVCALSMLLFGNAPSGMAQEKV-----YVNGIDANFPPFAFVDKTGKPDGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V     ++  +     K+ + P++      +L +K+IDI++     T  R     + F  
Sbjct: 56  VAALDWIAKEMG---FKVTHKPMDWDGIIPSLNAKKIDIIASGMSITEARRK--EVNFTE 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADY-FKAHNMKYHPIVFER 178
             +   Q  +  K    +  + +  G  I VQ GTT    + +   KA   K+  + ++ 
Sbjct: 111 PYWKITQVLVAKKDSAATPETAMKDGQKIGVQRGTTEAKWIEENLIKAQGKKFELVYYDS 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      R  A   D       K    +    +I    +       A+ + DTE  
Sbjct: 171 APLAVEDVVNGRIVAAAMDD---APAKDAEKKKPVKIIGSFGMPDETFGYAVRKEDTELL 227

Query: 239 NIVSWTHYAMVTAEELGITQKNIN 262
             ++     +  + E  + +K   
Sbjct: 228 KKLNEGLKKLQASPEWDVLRKKYE 251


>gi|327392853|dbj|BAK10275.1| cystine-binding periplasmic protein precursor FliY [Pantoea
           ananatis AJ13355]
          Length = 261

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 104/269 (38%), Gaps = 25/269 (9%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +  A  L DI+KRG L+  +      F  V  +   +G+D+D  + L+  +     K+
Sbjct: 18  AGNVLADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKL 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           Q +P+ +  R   LQ+ ++D++  +      RE    + F         G    K   + 
Sbjct: 75  QLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKV--IDFSRAYAPFFLGVFGPKGDHLK 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + LSG S+ V  G   ++ L++             +E      +AY + +        
Sbjct: 133 DAAALSGKSVGVTRGAVEDMVLSEVAPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGN 189

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
             + A+  T   P++  +   ++  SP    + + +    + V+          E GI  
Sbjct: 190 LVVAAI--TRQNPAKAPVAQFMLKDSPCYIGLKKDEPALKDKVNTLI-------EQGIKD 240

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
             +N++S++        +L     +N+G 
Sbjct: 241 GTLNKMSEE--------WLKAPLPANLGA 261


>gi|163800418|ref|ZP_02194319.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio sp. AND4]
 gi|159175861|gb|EDP60655.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio sp. AND4]
          Length = 247

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 87/258 (33%), Gaps = 21/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L  +   + +              +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLSSVTMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    ++  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCKEM---EAQCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LKQVNFSA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K+  ++    L G  + VQ G+T +  L +           + +   +
Sbjct: 107 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     ++ R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 162 DAFIDMKSGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221

Query: 239 NIVSWTHYAMVTAEELGI 256
           + ++     +    E  +
Sbjct: 222 SKLNTALNKVKANGEYDV 239


>gi|306833818|ref|ZP_07466943.1| polar amino acid uptake family ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus bovis ATCC
           700338]
 gi|304424012|gb|EFM27153.1| polar amino acid uptake family ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus bovis ATCC
           700338]
          Length = 278

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 86/276 (31%), Gaps = 20/276 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAE---VK 51
           M        L +        S   S         DIK +G L   +N     F     V 
Sbjct: 3   MKVSKLFGGLAVAAASLFLLSACGSSSSEDTSVSDIKDKGTLVVALNPEFAPFEFKTLVD 62

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G DV+  +A++  +  D   +++  ++      +LQS + DI       T  R+
Sbjct: 63  GKDTIVGADVEIAKAIAEELGVD---VKFSSMSFNNVLASLQSGKADIAISGISATEERK 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
                 F    Y      ++ K      +    L G S+  Q G+  E   ++       
Sbjct: 120 K--AYDFSDPYYEAENVVLIRKTDVDKYTDTDSLDGLSVGTQKGSIQETVASEQLA---- 173

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +   +  E+    +  + +A   +          N   +   I          A A
Sbjct: 174 GAKVVSLTQNSEMINELKNSQIEAVVLEKPIAEGYVANNSDLTIAGITLTSDDADAYAVA 233

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           + +G T+    V+     +  + ++    +N  ++S
Sbjct: 234 LPKGSTKLTKKVNKVIKELKESGKINQFIQNAYELS 269


>gi|152974511|ref|YP_001374028.1| extracellular solute-binding protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023263|gb|ABS21033.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus
           NVH 391-98]
          Length = 265

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F     
Sbjct: 1   MKKLFSVLAVATLAVGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDT 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSNPYVSSSAALVIAKDKDKPATFTDVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D +T +        L   + +   I+      S       
Sbjct: 170 EIVGVEGFSQAAELLNSGRVD-FTINDKLSVLNYLETKKDANIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 229 KGSGKLVQEVNKAL 242


>gi|49183381|ref|YP_026633.1| amino acid ABC transporter solute binding protein [Bacillus
           anthracis str. Sterne]
 gi|49476792|ref|YP_034686.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|65317795|ref|ZP_00390754.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bacillus anthracis str.
           A2012]
 gi|165871367|ref|ZP_02216015.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0488]
 gi|167634261|ref|ZP_02392583.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0442]
 gi|167640128|ref|ZP_02398395.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0193]
 gi|170688342|ref|ZP_02879551.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0465]
 gi|170708927|ref|ZP_02899360.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0389]
 gi|177653666|ref|ZP_02935805.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0174]
 gi|190567575|ref|ZP_03020488.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|218901560|ref|YP_002449394.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus AH820]
 gi|227813035|ref|YP_002813044.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. CDC 684]
 gi|228913105|ref|ZP_04076744.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229602677|ref|YP_002864982.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0248]
 gi|254686756|ref|ZP_05150614.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. CNEVA-9066]
 gi|254724832|ref|ZP_05186615.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A1055]
 gi|254739021|ref|ZP_05196723.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. Western North America USA6153]
 gi|254740745|ref|ZP_05198435.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. Kruger B]
 gi|254756135|ref|ZP_05208164.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. Vollum]
 gi|254761953|ref|ZP_05213802.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. Australia 94]
 gi|291612199|ref|YP_003541014.1| putative amino acid ABC transporter substrate-binding protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177308|gb|AAT52684.1| amino acid ABC transporter, solute binding protein [Bacillus
           anthracis str. Sterne]
 gi|49328348|gb|AAT58994.1| bacterial extracellular solute-binding protein, family 3; amino
           acid ABC transporter, periplasmic amino acid-binding
           protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|164712851|gb|EDR18380.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0488]
 gi|167511939|gb|EDR87318.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0193]
 gi|167530575|gb|EDR93290.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0442]
 gi|170126160|gb|EDS95054.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0389]
 gi|170667674|gb|EDT18428.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0465]
 gi|172081246|gb|EDT66321.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0174]
 gi|190561362|gb|EDV15334.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|218536809|gb|ACK89207.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus AH820]
 gi|224552853|gb|ACN55065.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|227004643|gb|ACP14386.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. CDC 684]
 gi|228846510|gb|EEM91523.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267085|gb|ACQ48722.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus anthracis str. A0248]
          Length = 264

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGKKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|239821013|ref|YP_002948198.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239805866|gb|ACS22932.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 280

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 90/255 (35%), Gaps = 13/255 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61
           ++ F        L   S   +A    DI  R  L+CG    +  FA       +  G DV
Sbjct: 4   RNVFRLTTIGTCLCAASLLAHADQWSDISARKELRCGTFADVPPFAAPDPKTREMVGHDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D C AL+  +       +  PL+ + R   ++  ++D+   N  +T  R     + F   
Sbjct: 64  DLCHALAKELG---LTAKVTPLSVEARVPEVKLGRVDVTIANLAYTKSR--GEQIQFSDP 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y   +   +      ++ +   G  +    G+T+EL++            P+ F+    
Sbjct: 119 YYVAKEMLAVKASDPGAAKADFKGKRLSSTKGSTSELSIK------MNGSEPVTFQDTGS 172

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              A + ++      +   +  L   +        ++ + +   P+   + + +      
Sbjct: 173 AFMAVQQNKSVGMVANTMTITKLVNQSKTEGVALKMIKEPMVLQPIGIGMKKDEPVLLAK 232

Query: 241 VSWTHYAMVTAEELG 255
           V+   YA+  + EL 
Sbjct: 233 VNGALYALEKSGELD 247


>gi|22124840|ref|NP_668263.1| solute-binding protein of ABC transporter [Yersinia pestis KIM 10]
 gi|45440527|ref|NP_992066.1| putative amino acid ABC transporter periplasmic protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|108808739|ref|YP_652655.1| putative amino acid ABC transporter periplasmic protein [Yersinia
           pestis Antiqua]
 gi|108811004|ref|YP_646771.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis
           Nepal516]
 gi|145600152|ref|YP_001164228.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis
           Pestoides F]
 gi|149364902|ref|ZP_01886937.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis CA88-4125]
 gi|165926628|ref|ZP_02222460.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165936051|ref|ZP_02224621.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011108|ref|ZP_02232006.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212982|ref|ZP_02239017.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398531|ref|ZP_02304055.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421596|ref|ZP_02313349.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167423593|ref|ZP_02315346.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468796|ref|ZP_02333500.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis
           FV-1]
 gi|218930282|ref|YP_002348157.1| putative amino acid ABC transporter periplasmic protein [Yersinia
           pestis CO92]
 gi|229838868|ref|ZP_04459027.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229896361|ref|ZP_04511530.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis Pestoides A]
 gi|229899437|ref|ZP_04514580.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901223|ref|ZP_04516345.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis Nepal516]
 gi|270489411|ref|ZP_06206485.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294504973|ref|YP_003569035.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis Z176003]
 gi|21957669|gb|AAM84514.1|AE013696_7 putative solute-binding protein of ABC transporter [Yersinia pestis
           KIM 10]
 gi|45435384|gb|AAS60943.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|108774652|gb|ABG17171.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis
           Nepal516]
 gi|108780652|gb|ABG14710.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis Antiqua]
 gi|115348893|emb|CAL21850.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis CO92]
 gi|145211848|gb|ABP41255.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis
           Pestoides F]
 gi|149291315|gb|EDM41389.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis CA88-4125]
 gi|165916196|gb|EDR34803.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921556|gb|EDR38753.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165990108|gb|EDR42409.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205769|gb|EDR50249.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960515|gb|EDR56536.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051035|gb|EDR62443.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057763|gb|EDR67509.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229681152|gb|EEO77246.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis Nepal516]
 gi|229687839|gb|EEO79912.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229695234|gb|EEO85281.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700637|gb|EEO88667.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis Pestoides A]
 gi|262363037|gb|ACY59758.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis D106004]
 gi|262366961|gb|ACY63518.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis D182038]
 gi|270337915|gb|EFA48692.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294355432|gb|ADE65773.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis Z176003]
 gi|320016446|gb|ADW00018.1| putative amino acid ABC transporter, periplasmic protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 262

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 12/244 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K        L+++   + +  A  L  I++RG L+  +      F  V  +   +G+D+
Sbjct: 4   KKRMLWLWAVLVLV--QAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+  +     K+Q + + +  R   LQ+ ++D++  +      RE    +AF   
Sbjct: 62  DMAQYLADKM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSRA 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    K   +    QL+G +I V  G   ++ L++             +E    
Sbjct: 117 YAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKA---AQIRRYEDNNT 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +AY + + +        + AL      P +  +   ++  SP    + QG+      V
Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231

Query: 242 SWTH 245
               
Sbjct: 232 DALI 235


>gi|229081413|ref|ZP_04213915.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock4-2]
 gi|228701903|gb|EEL54387.1| Arginine-binding extracellular protein artP [Bacillus cereus
           Rock4-2]
          Length = 259

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNEESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   +++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKASEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|78067960|ref|YP_370729.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77968705|gb|ABB10085.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 260

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 69/254 (27%), Gaps = 14/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ ++     + +  A  L  IK  G  + G       F      G   GFD
Sbjct: 1   MKFLRSILVVAMLQAVSVTSALAADDLSQIKSSGVFRVGTEGTYAPFTYHDETGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +   P   Q++          L   + D +      T  R+      F  
Sbjct: 61  VDIATAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVVNEVSITDARKA--KYDFST 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I S   L G        T+    LA    A       +  +  
Sbjct: 116 PYITSRAVLIVRADNTTIRSFDDLKGKKSA-NTLTSNFGKLAASHGA-----DVVPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWY 238
            E      + R DA   D  +    +         V   D           + +G     
Sbjct: 170 NEAIDLLSSGRVDATINDSLSYLDFRKHKPDAKLKVAATDTGGASDASGVLLRKGSPALV 229

Query: 239 NIVSWTHYAMVTAE 252
             V     A + A+
Sbjct: 230 AAVDKAL-ADIKAD 242


>gi|261246087|emb|CBG23889.1| glutamine-binding periplasmic protein precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
          Length = 248

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDV+
Sbjct: 2   KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVE 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  E    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|206974287|ref|ZP_03235204.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus H3081.97]
 gi|217957950|ref|YP_002336494.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus AH187]
 gi|206747527|gb|EDZ58917.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus H3081.97]
 gi|217063393|gb|ACJ77643.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus AH187]
          Length = 264

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVELGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|16765292|ref|NP_460907.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167993523|ref|ZP_02574617.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|4115511|dbj|BAA36399.1| FliY [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420489|gb|AAL20866.1| putative periplasmic binding transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|205328406|gb|EDZ15170.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261247120|emb|CBG24943.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993940|gb|ACY88825.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158468|emb|CBW17978.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312912944|dbj|BAJ36918.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321224597|gb|EFX49660.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323130232|gb|ADX17662.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 266

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|331673438|ref|ZP_08374206.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA280]
 gi|331069636|gb|EGI41023.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Escherichia coli TA280]
          Length = 285

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 33  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 93  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 148 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261

Query: 245 H 245
            
Sbjct: 262 I 262


>gi|284048792|ref|YP_003399131.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
 gi|283953013|gb|ADB47816.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
          Length = 255

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 79/257 (30%), Gaps = 12/257 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K      +   ++       + +      ++  L  G       F       G+  GF
Sbjct: 1   MKKILAAICIFAALMGTLGCGGSQTAGNKPAEKKELIVGTEPSFAPFEFPDKKSGEITGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  +A+        +K+    +       AL +  ID+       T  R+    + F 
Sbjct: 61  DMELIKAMGKKAGF--AKVTVKGMGFDALIPALDAGNIDVAIAGMSITDARK--QKVNFT 116

Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++ K    I S++ L G +I VQ GTT          A         F+ 
Sbjct: 117 DPYYESGLATLVRKDNTTIKSLNDLKGKTIAVQLGTTGAEAAGKIEGA-----TVKTFDT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +      +    DA   D+  L    L         ++ +         A  + + +  
Sbjct: 172 SDTACLELKNGGADAVISDLPVLQ-YFLKQGGGEYAKMVGEPTKGDMYGIATAKKNKDLA 230

Query: 239 NIVSWTHYAMVTAEELG 255
           + ++     +  + E  
Sbjct: 231 DKLNKALADLKKSGEYQ 247


>gi|238758079|ref|ZP_04619259.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236]
 gi|238703617|gb|EEP96154.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236]
          Length = 272

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ L +    +       S+LG +K+RG L  G+      F+    +G   GF
Sbjct: 13  RRKAALGMMALTLAAGLNVKSYAADSLLGQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF   L+  +      ++  P        +L+SK+ID+       +  R+      F 
Sbjct: 73  EVDFANELAEHMGVK---VKLAPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 127

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  K      +    L G  + V  G+  E  L    +A+        ++
Sbjct: 128 TPYTISGIQVLTKKGNEGRFTKPEDLEGKKVGVGLGSNYEQWL----RANLKGVDIRTYD 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  R DA   D   L AL L         +     ++     A+ + + E 
Sbjct: 184 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTHDTLAVAGPAFARQESGVALRKNNPEL 241

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 242 LAAINKAI 249


>gi|229168898|ref|ZP_04296615.1| Arginine-binding extracellular protein artP [Bacillus cereus AH621]
 gi|228614490|gb|EEK71598.1| Arginine-binding extracellular protein artP [Bacillus cereus AH621]
          Length = 259

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 13/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N     + K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKANGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+      F
Sbjct: 61  FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTAERK--NNADF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I S+  L G  + VQ G+  E    ++ K  + K      +R
Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-QGDTEW 237
           + EI    +A R DA   + +             E   +    +   +  AI    +++ 
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK---ELQGIEIQEAPEEVGAAIALSKNSDK 230

Query: 238 YNIVSWTHYAMVTAEELG 255
               +     M    E+ 
Sbjct: 231 TEEFNKVIKKMQENGEMD 248


>gi|260587479|ref|ZP_05853392.1| glutamine ABC transporter, substrate binding protein [Blautia
           hansenii DSM 20583]
 gi|331084134|ref|ZP_08333240.1| hypothetical protein HMPREF0992_02164 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541744|gb|EEX22313.1| glutamine ABC transporter, substrate binding protein [Blautia
           hansenii DSM 20583]
 gi|330401989|gb|EGG81562.1| hypothetical protein HMPREF0992_02164 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 282

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 28/262 (10%)

Query: 1   MYKDFFVSILCLIILFF--TSFSTNASILGDIKK-------------RGFLKCGINTGLV 45
           M K   + +   +++ F  ++   N S     +K             R     G +    
Sbjct: 1   MKKRIALILTGTMLMGFVLSACGDNESTEKKDEKTENSVETSSNANNRTTFTVGFDAEYP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            +  +  NG++ GFD++   A+      +  K    P+N   + + L S  ID +     
Sbjct: 61  PYGYMDENGEYTGFDLELAEAVCKLEGWELVK---KPINWDAKDMELNSGAIDCIWNGFT 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                +      F      + Q  ++ +  GI++   L+G ++ VQA +     L    K
Sbjct: 118 MNGREDE---YTFSTPYVDNSQVIVVAENSGINTPEDLAGKTVGVQAASAALELLQSDEK 174

Query: 166 A-----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                  +       F          +A   DA   D     A      R   + IL + 
Sbjct: 175 DGQKALADTFGALNEFADYNTAFTELQAGALDALAID--IGVANYQIKSRGEGYKILEET 232

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
           ++    A A  +GD E  ++V+
Sbjct: 233 LNTEQYAIAFKKGDQELRDVVN 254


>gi|329117390|ref|ZP_08246107.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Streptococcus parauberis NCFD 2020]
 gi|326907795|gb|EGE54709.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding
           protein [Streptococcus parauberis NCFD 2020]
          Length = 271

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 98/224 (43%), Gaps = 11/224 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++  +  I+K G ++ G+   +  F     + G ++G +V+  + ++ ++        + 
Sbjct: 33  SSKEIKKIQKAGIIRVGVKQDVPNFGYYSPDTGKYEGMEVEIAKDIAKSLGVKAE---FT 89

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + A+ R   L + Q+D++      T   E     +F    Y D  GF+++K  G  S+ 
Sbjct: 90  AVTAQTREALLDNGQLDMIIATYTITP--ERQANYSFSKPYYLDEVGFLVNKSDGFKSIK 147

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+  +I V  G+TT++ + ++ KA+N+ +  +      E+  +  + R  A++ D S L
Sbjct: 148 SLNNKTIGVAQGSTTKVAIEEFGKANNLHFKFVQLGSYPELAISLYSTRISAFSVDKSIL 207

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +    +     IL D  ++     A  + +    N ++   
Sbjct: 208 TGYQSKQTQ-----ILSDGFNQQAYGIASTKANKNLTNYINDLI 246


>gi|323936600|gb|EGB32887.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1520]
          Length = 260

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   T+ S+ A++         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLISAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|229013365|ref|ZP_04170505.1| Arginine-binding extracellular protein artP [Bacillus mycoides DSM
           2048]
 gi|228747958|gb|EEL97823.1| Arginine-binding extracellular protein artP [Bacillus mycoides DSM
           2048]
          Length = 259

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSIFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+      F
Sbjct: 61  FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTAERK--NNADF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I S+  L G  + VQ G+  E    ++ K  + K      +R
Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKTE 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|229083653|ref|ZP_04215978.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-44]
 gi|228699671|gb|EEL52331.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-44]
          Length = 264

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F  +  + +       + S  +S      ++   +  ++     F   + +G   
Sbjct: 1   MRKKIFTVVAAITLCASFILGACSKESSTTSGGGEK-EFRYAMSGLYKPFNFKENDGKLV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +   P  +       +     L++K+ D++  +   T   +    + 
Sbjct: 60  GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 114

Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G   F+  K   ISS   L G  + V   +T +  +A              +
Sbjct: 115 FSNPYYRSGAQIFVDKKNNSISSAEDLKGKKVGVVKASTFKALVA------KQTNQITEY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +  AI + D E
Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 227 MVKKVNKALDEII 239


>gi|289422666|ref|ZP_06424506.1| arginine-binding periplasmic protein 2 [Peptostreptococcus
           anaerobius 653-L]
 gi|289156845|gb|EFD05470.1| arginine-binding periplasmic protein 2 [Peptostreptococcus
           anaerobius 653-L]
          Length = 281

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 94/283 (33%), Gaps = 28/283 (9%)

Query: 1   MYKDF-------FVSILCLIILFFT---SFSTNASI-LGDIKKRGFLKCGINTGLVGFAE 49
           M K          V+++ L ++      + + ++   L  I+    L  G +     F  
Sbjct: 1   MKKGLKKLAALGLVAVMALGMVACGKKDAGANSSQTALAKIQANKKLVLGTSPDYPPFEF 60

Query: 50  V---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +      G+  G D++  + L+  +  +   ++   ++      ALQS ++D++      
Sbjct: 61  LVSEGGKGNVVGADIELAKKLAEKMGVE---LEIKTIDFDALIPALQSGKVDVVITGMSP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  I +    G I+ K       +   L  A + VQ G+T E  + D  
Sbjct: 118 TEERKK--NIDFSDIYFQGKNGVIVKKGDAGKYKTEDDLKKAKLGVQKGSTQETYIKDTL 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           K    K        V ++    +    DA   +           D       +    +  
Sbjct: 176 KVIGYKG----LTAVPDLVMDLKNGNVDAIVLNDKVAGINATKYDGVEIVKDIKMTSAGE 231

Query: 225 PLAPAI---IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
             A AI      + +   +++     +  + E      +  ++
Sbjct: 232 EEAMAIAVKKGDNKDLIELMNKVIKDLNASGEYDKILADAVEL 274


>gi|170746458|ref|YP_001752718.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170652980|gb|ACB22035.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 302

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 84/256 (32%), Gaps = 8/256 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      + S     L  I+  G +  G       F  +  N    G+ 
Sbjct: 1   MSRTLPLLLATLCWAGLAAPSAAEGRLDKIRATGQISLGFPDASPPFGFLDQNAKPVGYS 60

Query: 61  VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           ++ C  ++      +  +  +++++P+ +  R   + +  ID+          R     +
Sbjct: 61  LEICEHVAQKLKAVLGMNKLEVRHVPVMSATRIPLINNGTIDLECGTASNLPERHKL--V 118

Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           +F P T+      +  K     +  ++   G +I  QAG  T+           +    +
Sbjct: 119 SFAPTTFVAQVVLVAKKDTPVDVDDIASFRGKAISAQAGGETQRVATRINVRDKLDIQVM 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   E+       R      D +  +A      RP+++ I    +  +P      + D
Sbjct: 179 PAKDTAEVFLLVETGRAAGAINDDALAHATVAGAKRPADYKIGTKGLEFAPYGILEPKDD 238

Query: 235 TEWYNIVSWTHYAMVT 250
             +   V      ++ 
Sbjct: 239 AAFKAAVDKAVVELIQ 254


>gi|296333448|ref|ZP_06875901.1| High affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305675046|ref|YP_003866718.1| high affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296149646|gb|EFG90542.1| High affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305413290|gb|ADM38409.1| High affinity arginine ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 255

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 99/255 (38%), Gaps = 11/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   I    ++  +++S     KK   +  G +     F   + + +  GFD
Sbjct: 1   MKKWLLLLVAACITFALSACGSSSSGSESGKK--KIIMGTSADYKPFEYKEGD-NIVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL+     +   I+   ++      AL+SKQ+D++      T  R+    + F  
Sbjct: 58  VDLAKALAKKTGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKK--QVDFSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y      +  K  GI+S+  L G ++ VQ G+  E    +    +  +       R+ 
Sbjct: 113 VYYTANHMIVSKKDSGITSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFQTEDR--NRIS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++    ++ R DA   +          ++   +  ++PD  ++   +    + D+E  + 
Sbjct: 171 DLVQEIKSDRFDAAIIEDMVAEGY-FKSNDDLQGFVIPDAKAEEAGSAIAFRKDSELTDK 229

Query: 241 VSWTHYAMVTAEELG 255
            +     M    EL 
Sbjct: 230 FNKALKEMEDNGELE 244


>gi|239918031|ref|YP_002957589.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Micrococcus luteus NCTC 2665]
 gi|281415790|ref|ZP_06247532.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Micrococcus luteus NCTC 2665]
 gi|239839238|gb|ACS31035.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Micrococcus luteus NCTC 2665]
          Length = 297

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 7/221 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ GI     G    + +    GFD D  R ++  +      I+++   +  R  AL++ 
Sbjct: 53  LRIGIKFDQPGLGYREGSAQPTGFDTDVARYVADKLGVAEQDIEWVQTPSANRENALENG 112

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
           ++D++      T  R+    + F    +  GQ  ++      I+    L G ++C   G+
Sbjct: 113 EVDMIFATYSITDARKE--RVDFAGPYFVAGQDLLVRADDTAITGPESLDGKNLCSVTGS 170

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T+   + D F +     + +      E      + + DA T D   L  L   +    + 
Sbjct: 171 TSAQKIKDQFAS---GVNLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAAADANKGKF 227

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            ++    +       + +      +I +     M  + E  
Sbjct: 228 KVVGSTFTTERYGVGLPKDSEHCEDI-NEAIKEMKDSGEWK 267


>gi|204930952|ref|ZP_03221778.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204319996|gb|EDZ05201.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 266

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTISGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRIGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|262041043|ref|ZP_06014262.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259041601|gb|EEW42653.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 243

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + AN    GFD
Sbjct: 1   MKKLVLAALLTSFAFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  IDLAHALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    S   L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDTFHSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P      P +         L  A+   +  
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNAALKAI 227


>gi|229114025|ref|ZP_04243451.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock1-3]
 gi|228669484|gb|EEL24900.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock1-3]
          Length = 264

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M K     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKKKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     LQSK+ D +  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMGMKPAPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  ++              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKTLVS------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VKKVNKALDEII 239


>gi|170769446|ref|ZP_02903899.1| cystine-binding periplasmic protein [Escherichia albertii TW07627]
 gi|170121770|gb|EDS90701.1| cystine-binding periplasmic protein [Escherichia albertii TW07627]
          Length = 266

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---ALKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K  +  I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQTLVKKGYEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDMLAVTGEAFSRQESGVALRKGNEDLLKAVNGA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|292487797|ref|YP_003530672.1| arginine ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|291553219|emb|CBA20264.1| Arginine ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
 gi|312171916|emb|CBX80173.1| Arginine ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 243

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L   +                ++         F  + AN   +GFD
Sbjct: 1   MKKIVIAALLAGYSLSAGASQ-------------TIRFAAEASYPPFEFIDANNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I  D     +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCREIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++SV  L G  + VQ GTT +  +A+           + ++  +
Sbjct: 103 AYYDNSALFITQKG-KVASVDALKGKRVGVQNGTTHQKYIAEKLPE----VKVVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N    P    +       S L  A+ QG++E  
Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKKNPELAPLGEKVTDKSYFGSGLGIAVRQGNSELQ 217

Query: 239 NIVSWTH 245
             ++   
Sbjct: 218 GKLNAAL 224


>gi|183597011|ref|ZP_02958504.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827]
 gi|188023667|gb|EDU61707.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827]
          Length = 276

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 103/307 (33%), Gaps = 65/307 (21%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80
            NA  L DIK+ G ++  +      F  +        G+DVD  +A++  +      ++ 
Sbjct: 21  ANADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGYDVDIAQAIADDLGVK---LEL 77

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P N   R   L S ++D++  N   T  R     + F    +  GQ FI  K   + + 
Sbjct: 78  RPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFSIPDFATGQKFIARKG-VLKTP 134

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             ++   I    GT  E+TL + +         I ++   +  AA R     A T D + 
Sbjct: 135 DDIAPLRIGADKGTVQEVTLRERYP----NTKVISYDDTPQAFAALRNGNVQAITQDDAK 190

Query: 201 LYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           L  L         ++  I P  I++   A A  +G+T     V+ T              
Sbjct: 191 LVGLLGNLPEKVKADFEISPFSITREYQAVAAAKGETRLIENVNNT-------------- 236

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
                             L ++K                          ++++R  G  +
Sbjct: 237 -----------------LLKLEKEGKA---------------------EQIYNRWFGPDT 258

Query: 319 ELKIPRG 325
           +   PRG
Sbjct: 259 KAAQPRG 265


>gi|134294561|ref|YP_001118296.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134137718|gb|ABO53461.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 266

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|320177302|gb|EFW52306.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Shigella dysenteriae CDC 74-1112]
          Length = 248

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 86/247 (34%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L ++F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSVLKVSLAALTLVFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + D +       A  +G  E  +
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRD 220

Query: 240 IVSWTHY 246
            V+ T  
Sbjct: 221 KVNGTLK 227


>gi|290473507|ref|YP_003466376.1| cysteine ABC transporter periplasmic binding protein [Xenorhabdus
           bovienii SS-2004]
 gi|289172809|emb|CBJ79580.1| cysteine transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus bovienii SS-2004]
          Length = 257

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 74/249 (29%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +     L  ++ S     L  IK  G  K G       F          GFD
Sbjct: 1   MKAFLSLLLAGATALTISAPSYAGKDLDAIKASGVFKVGTEGTYPPFTYHDQANKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R ++  +   P    ++ +        L +K+ D +      T  RE     +F  
Sbjct: 61  VDIAREVARRLNVKPE---FMEVKWDGLIAGLDAKRFDAVINQVGVTPEREA--KYSFSI 115

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I       I + + + G     Q+ T+    LA    AH      +  +  
Sbjct: 116 PYTASQVVLITRDNNSDIKTFADIKGKRSA-QSLTSNYGQLATSNGAH-----LVSTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R DA   D  +    K         ++     +    A  + +GD E   
Sbjct: 170 NQAIDLVATGRADATLNDRLSFLDFKKQRPDAPVKIVAQQADASKS-AVLLRKGDPELIA 228

Query: 240 IVSWTHYAM 248
           +++     M
Sbjct: 229 VINKALQDM 237


>gi|168239190|ref|ZP_02664248.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194736301|ref|YP_002114987.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194711803|gb|ACF91024.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288089|gb|EDY27476.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 266

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTISGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|62179395|ref|YP_215812.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|224582641|ref|YP_002636439.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|62127028|gb|AAX64731.1| ABC superfamily (bind_prot), glutamine high-affinity transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224467168|gb|ACN44998.1| glutamine ABC transporter periplasmic-binding protein [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|322713866|gb|EFZ05437.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 248

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F  +S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSLLKVSLAALTLAFAVYSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  E    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|330832846|ref|YP_004401671.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis ST3]
 gi|329307069|gb|AEB81485.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis ST3]
          Length = 270

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 91/264 (34%), Gaps = 18/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K     ++ L  +  ++ S NA+     L D++++G L   +N     F         
Sbjct: 2   MKKYIMTGLVLLATIGLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 61

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D++  +A+   +  +   +++  ++       +QS Q DI       T  R   
Sbjct: 62  DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 118

Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      I++K+     +S+  L+ A+I  Q G+  E  + +   +     
Sbjct: 119 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 172

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I      E+    ++ + +A   +     A    ND                 A A+ 
Sbjct: 173 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           +G T     V      +V + ++ 
Sbjct: 233 KGSTALKEKVDSVITKLVESGQMD 256


>gi|238912473|ref|ZP_04656310.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 266

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|161503951|ref|YP_001571063.1| hypothetical protein SARI_02043 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865298|gb|ABX21921.1| hypothetical protein SARI_02043 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 243

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + A+    GFD
Sbjct: 1   MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    + + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDTYKTFADLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN +  P+   +       + L  A+   +    
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNNALTAI 227


>gi|317053657|ref|YP_004118791.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316952762|gb|ADU72235.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 261

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 14/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+ L    F   A+ L DIK RG L+         +    A G   G D
Sbjct: 1   MK--TIGKTLALVALCALPFLAQANSLDDIKSRGVLRVATTVDAAPWGFTDAAGKPTGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + L+  +      +Q   +    R   L S+++D+L          E +  + F  
Sbjct: 59  VDLAQKLADNMGVK---LQLQQVTGANRIPYLMSRKVDVLIAALG--SSPERAKLVNFSE 113

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                  G       K ++ +S LS A+I V  G+T +LTL+D     N     +  E  
Sbjct: 114 PYAAVYLGVYGGSDVKKVTKLSDLSNATIAVPKGSTPDLTLSDQNPQGNY----LRLEDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               +A+ + +   +  +     A K+  + P++H+ L  ++ KSP   AI  G  E   
Sbjct: 170 ASAVSAFLSGQAPMFAENNLI--AQKVAQENPAKHIELKYLLRKSPAYIAIRPGQPELMA 227

Query: 240 IVSWTHYAMVTAEEL 254
            ++          EL
Sbjct: 228 AINQFIDKSTQDGEL 242


>gi|154149175|ref|YP_001406108.1| amino acid [Campylobacter hominis ATCC BAA-381]
 gi|153805184|gb|ABS52191.1| amino acid [Campylobacter hominis ATCC BAA-381]
          Length = 270

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 17/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L  L        A+ L +IK    L+ G+      F+++K NG+++GF+
Sbjct: 1   MKKILVFLMFMLGFLS-------ANSLNEIKSSKILRVGVFEAQPPFSQIKENGEFEGFE 53

Query: 61  VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           VD  + ++  IF  +   I++ P+ A +R   LQ+ +ID L      T  R     + F 
Sbjct: 54  VDLAKEIAKKIFGGNSGTIEFKPVLASDRLKVLQNNEIDFLIATFTITDERSKV--IDFS 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    G +  K  GI + + L G +I  + GTT E+         N  ++ +  +  
Sbjct: 112 NPYFAVNIGVVTRKDDGIKTFADLKGKTIIAEHGTTGEVYFR------NQGFNILGCDGA 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  +     A     + +       D+  E   +  + +   L   + +G+ E  N
Sbjct: 166 ANCYKMLKNTPDAAGYASDNTIVLTYAVIDKSLEVN-INSLGASDFLGIGVQKGNKELLN 224

Query: 240 IVSWTH 245
           I++   
Sbjct: 225 IINDEL 230


>gi|238790814|ref|ZP_04634571.1| Extracellular solute-binding protein family 3 [Yersinia
           frederiksenii ATCC 33641]
 gi|238721091|gb|EEQ12774.1| Extracellular solute-binding protein family 3 [Yersinia
           frederiksenii ATCC 33641]
          Length = 260

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L+     S    A  +  I        G++ G   F  +  +G+  GFD
Sbjct: 4   MKK----TLAALLTGLILSAPVAAQTIDTI------SFGVDGGYPPFDVLAPSGEITGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  ++    +    AL +++ D +  +   T  R+    + F  
Sbjct: 54  IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITEERKK--EVDFTD 108

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   +   V+ L G ++ VQ G+  E     ++         + +   
Sbjct: 109 RYYRSAAQLVARKGSTLSPDVATLKGKTVGVQTGSIHEAFAKKHWA--GQGIKIVSYANQ 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D     +  +   R  +      +I    +      A+ + + 
Sbjct: 167 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISTDVGIAVGKDNP 226

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 227 ALRDALNGAIKAI 239


>gi|311103255|ref|YP_003976108.1| extracellular solute-binding protein, family 3 family protein 2
           [Achromobacter xylosoxidans A8]
 gi|310757944|gb|ADP13393.1| bacterial extracellular solute-binding protein, family 3 family
           protein 2 [Achromobacter xylosoxidans A8]
          Length = 303

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 88/241 (36%), Gaps = 8/241 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73
           ++ +   S L  IK+ G +  G     V FA +  N    G+ V+ C+ ++    +A+  
Sbjct: 19  SAHAEGPSRLDKIKETGVITLGHPETSVPFAYLDGNQKPIGYTVEICQEVAQYVKAALKL 78

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++Y P  +  R   L +  ID+   NT   L R     ++F P T+      +  K
Sbjct: 79  PKLEVRYNPTTSATRIPLLANGTIDLECGNTTNNLERHKL--VSFAPTTFVAQVVLVARK 136

Query: 134 KKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
             G+  +++    G SI  QAG  T   ++      N+       +   E      + R 
Sbjct: 137 DGGVDPNNLESFRGKSIAAQAGGQTFRLISQLNAKGNLGITMAPTKDTAETILMVESGRA 196

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                D    Y    ++  P   VI    +  +P      + D  +  +V      ++  
Sbjct: 197 AGSANDDGIAYGAVASSKNPDAFVIGTKGLEMAPYGIMEPKDDPAFKKVVDDAVRDLIKT 256

Query: 252 E 252
            
Sbjct: 257 G 257


>gi|320355176|ref|YP_004196515.1| PAAT family amino acid ABC transporter substrate-binding protein
           [Desulfobulbus propionicus DSM 2032]
 gi|320123678|gb|ADW19224.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 273

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 88/247 (35%), Gaps = 21/247 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + +  ++L + +   +S +          ++G LK G+      F      G   G  V
Sbjct: 14  IRKWLGTLLLVAVFAVSSCAAE--------QQGPLKVGMELAYPPFEMTNTTGKPAGVSV 65

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +AL  ++  +   I+   ++      AL++ +IDI+  +   T  R  +  + F   
Sbjct: 66  DLAKALGISLGRE---IKIENMSFDGLIPALKTGKIDIILSSMTATAER--AQSIDFSEP 120

Query: 122 TYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               G   ++ K   + +++ L   G ++ V+ GTT     +   K        +V ++ 
Sbjct: 121 YLQTGLCLLVRKDSAVQTIADLDQDGMTVAVKKGTTGHNYASKALKKAK----LLVLDKE 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     + DA+  D  + Y+       P     L     +   A  I + +T    
Sbjct: 177 AAAVLEVVQGKADAFIYDQMSTYSN--WKRNPQTTRALLKPFQQESWAIGIRKDNTALKE 234

Query: 240 IVSWTHY 246
            ++    
Sbjct: 235 EINRFLK 241


>gi|331667180|ref|ZP_08368045.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA271]
 gi|331065536|gb|EGI37429.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA271]
          Length = 248

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 84/245 (34%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D++      T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLVLAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|306824969|ref|ZP_07458312.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432796|gb|EFM35769.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 271

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K   V    L  +   +  ++       +  IK++G L    +     F     V    
Sbjct: 4   KKWILVVCSMLASVILVACQSSTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        +S L+ A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKMSFLVRKSDLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A AI +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLAVATVNLTMKDGEANAVAIKK 234

Query: 233 GDTEWYNIVSWTHY 246
             ++   +V     
Sbjct: 235 DQSDLKAVVDKVIQ 248


>gi|295109554|emb|CBL23507.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Ruminococcus obeum A2-162]
          Length = 292

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 20/253 (7%)

Query: 1   MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     ++  ++     ++ S  A I         L  G +     +  +  +G++ G
Sbjct: 1   MKKKAVAVLVTAVMAMGMVSAVSVQAGIEDK-----TLIVGFDAEYPPYGYMDDDGEYTG 55

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++  +A+      +  +++  P+N   + + L S  ID +          +      F
Sbjct: 56  FDLELAQAVCD---LEEWELEKKPINWDSKDMELNSGSIDCIWNGFTMNGRED---DYTF 109

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-----HNMKYHP 173
                 + Q  ++ +  GI  ++ L+G  + VQA +     L    +       +     
Sbjct: 110 SDPYVDNSQVIVVAEDSGIDKLTDLAGKIVGVQAASAALDLLQSEEEGGQKELADTFGSL 169

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F          +A   DA   D     A    N R     IL + ++    A    +G
Sbjct: 170 NEFADYNTAFTELQAGALDALAID--IGVAKYQLNSRGEGFKILDETLNTEQYAIGFKKG 227

Query: 234 DTEWYNIVSWTHY 246
           + E   IV+    
Sbjct: 228 NDELCGIVNADLQ 240


>gi|309702622|emb|CBJ01951.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli ETEC H10407]
          Length = 260

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   T+ S+ A++         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLTAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|300811731|ref|ZP_07092205.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497307|gb|EFK32355.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 286

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77
             S   S     K+   +  G+      F       G  +GF++D   A++  I    SK
Sbjct: 30  CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
             + P+  K R   L +  +D +      T  R     + F  + +   +  I+ K   I
Sbjct: 90  AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S++ L+   + V A   T+  +A+       K     F+       A +A + D    D
Sbjct: 148 RSIADLNKKGVVVIAIKGTD--VANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMIDD 205

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              L  L        E  +    +++ P    + +G TE    ++    
Sbjct: 206 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 251


>gi|291085212|ref|ZP_06352421.2| cystine ABC transporter, periplasmic cystine binding protein
           [Citrobacter youngae ATCC 29220]
 gi|291072355|gb|EFE10464.1| cystine ABC transporter, periplasmic cystine binding protein
           [Citrobacter youngae ATCC 29220]
          Length = 273

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 8   MKLALLGRQALMGVMAVALVAGMSVKTYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 67

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F  AL+  +          P        +L SK+ID++      +  R+  
Sbjct: 68  GKLTGFEVEFAEALAKHLGVKA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 124 -KYDFSTPYTVSGIQALVKKGNEGVIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  +  S+     A+ 
Sbjct: 179 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQESGVALR 236

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 237 KGNEDLLKAVDAAI 250


>gi|257470742|ref|ZP_05634832.1| TcmP [Fusobacterium ulcerans ATCC 49185]
 gi|317064947|ref|ZP_07929432.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313690623|gb|EFS27458.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 241

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 86/249 (34%), Gaps = 22/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + +L L+I+   +   +       K       G N     F  +  +G   G D
Sbjct: 1   MKKLFKLFMLSLLIVLTAACGAS-------KTEKVYVIGTNAEYPPFEYL-EDGKVCGLD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   A++  +     + ++   N      ALQ+K++D +      T  R     + F  
Sbjct: 53  ADIIAAIAQKL---NIQYKWSNTNFDGLIPALQTKKMDAVIAGMSITPERAK--AVNFSI 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   FI +K K I+ +  L   +   + GTT E        A         F    
Sbjct: 108 PYLSSNVAFIANKSKPINGIEDLENKNYGAELGTTKEAAARKIKGA-----TVTPFSSNT 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A ++ + D    D S   A+K   + P   ++L   +   P A A  + DTE    
Sbjct: 163 GALVALKSGKIDGIVLDES--VAVKFVENNPE--LMLVGALEGEPKAIAFNKDDTELMEK 218

Query: 241 VSWTHYAMV 249
            +     ++
Sbjct: 219 FNKALQELI 227


>gi|229031800|ref|ZP_04187789.1| Arginine-binding extracellular protein artP [Bacillus cereus
           AH1271]
 gi|228729546|gb|EEL80534.1| Arginine-binding extracellular protein artP [Bacillus cereus
           AH1271]
          Length = 259

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 100/283 (35%), Gaps = 26/283 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGKEKASGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++ K  + K      +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEDLKGKKVGVQTGSIQEEKAAEFKKEVDFKVEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +                              I +   E  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLGKMK--------------ELQGIEIKEAPEEVG 219

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
             ++    +  TAE   + +K          +  V+++ G +K
Sbjct: 220 AAIALPKNSDKTAEFNKVIKK---MQENGEMDKLVKKWFGSEK 259


>gi|319943564|ref|ZP_08017846.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
 gi|319743379|gb|EFV95784.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
          Length = 281

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 7/214 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++             +  GFD+D  R  +S +     ++++ P++   +   L  
Sbjct: 55  KVVIGLDDNFPPMGFRNEKNELVGFDIDMAREAASRMG---VQVEFKPIDWNAKEAELIG 111

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K++D L      T  R+    +AF P    + Q  I+ +   I + + L+G  +  Q G+
Sbjct: 112 KRVDALWNGLTITEKRK--QNIAFTPPYMQNHQIIIVKRGSPIGNKTGLAGKIVGAQDGS 169

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           +    +    K          +     +     A R DA   D   +        +P  +
Sbjct: 170 SAVDAIEADAKVSKSLKQLKKYGDNVTVLLDLDAGRLDAAVLDE--VVGRYYVAKKPFAY 227

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           V+L +          + + DT     +S    +M
Sbjct: 228 VVLEEDFGTEDYGVGLRKEDTALQEKLSAALESM 261


>gi|307308380|ref|ZP_07588085.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306901181|gb|EFN31788.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 281

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 94/290 (32%), Gaps = 25/290 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +        L+     +    A    +IK +G    G+      +  +  NG   GFD++
Sbjct: 12  RALSAITAVLLAATAFATGAEAVTPEEIKAKGTAVIGVQMDQFPWGFIDQNGQNDGFDIE 71

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +  +   +++  +  + R   L +  +D L  +   T  R   +   +    
Sbjct: 72  IAKLIAQELGVE---VKFERITGQNRIPLLVNGNVDFLVPSMTVTEERAKVIQ--YVIPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             +       K   I     L    I V  G+  E  L    KA         F+     
Sbjct: 127 SSNDITVWAKKDAEIKGNEDLGKYVIGVNRGSVFEPVL---VKAAPPSTEIKRFDDDATT 183

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + + DA  G  S  Y L +   R S        ++ +    A+ +GD E  N ++
Sbjct: 184 VQALLSGQVDAILG--SVTYGLVIKETRHSAEYERKYKVADNFQGMAVRKGDQEMLNFLT 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
                                 +  + +   ++++G+D++       G+ 
Sbjct: 242 DFVT---------------RHTADGSLDALYKKWIGVDRAELPTTLPGID 276


>gi|300118988|ref|ZP_07056699.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus SJ1]
 gi|298723604|gb|EFI64335.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus SJ1]
          Length = 264

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTTSNGKKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + + E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDNKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|312112153|ref|YP_003990469.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
 gi|311217254|gb|ADP75858.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
          Length = 270

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 13/228 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S      +L  +KK G L+ G       F     +G+  GFDVD  R ++  +   P   
Sbjct: 32  SGKKETDLLAQVKKEGELRIGTEGTYPPFTFHDQSGELTGFDVDLAREVAKRLGVKP--- 88

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++       F  L +K+ D+++        R+      F           ++HK     
Sbjct: 89  VFMETQWDAMFAGLDAKRFDMIANEVGI--RRDRQQKYDFSDPYITSMAVLVVHKDNNKV 146

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +        Q+ T+    LA  + A       +  E   +      + R D    D 
Sbjct: 147 SKFENIKGLKAAQSMTSNFADLARSYGA-----QIVGVEGFNQAVELLSSKRVDVTINDN 201

Query: 199 -SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            S L  L+   + P    I+      S       +G       V+   
Sbjct: 202 LSVLDFLRQKPNAPI--KIVAKHKDASQSGFMFRKGSDTLVEAVNKAL 247


>gi|218899317|ref|YP_002447728.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|228902667|ref|ZP_04066817.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           IBL 4222]
 gi|228967197|ref|ZP_04128233.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218543126|gb|ACK95520.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|228792566|gb|EEM40132.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228856982|gb|EEN01492.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           IBL 4222]
          Length = 259

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 9/212 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + EI    +A R DA   + +           
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD 205


>gi|257069405|ref|YP_003155660.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
 gi|256560223|gb|ACU86070.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
          Length = 290

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 6/199 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ GI     G    +  GD  GFDV+  + ++  +     +I+++   +  R  AL+  
Sbjct: 45  VRIGIKYDQPGLGFREGGGDPTGFDVEVAKYVADELGYSEDQIEWVQTPSANRENALEGG 104

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
           ++D++      T  R+    + F    +  GQ  ++      I+    L G ++C   G+
Sbjct: 105 EVDMIIATYSITDERKE--RVDFAGPYFVAGQDLLVRADDSEITGPEALDGKNLCSVTGS 162

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T+   + D +         +      E      + + DA T D   L  L  T +   + 
Sbjct: 163 TSAQKIKDEYAE---GVQLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAATPENSGKF 219

Query: 215 VILPDIISKSPLAPAIIQG 233
            ++ +  S       I  G
Sbjct: 220 KVVGNPFSVERYGVGIPSG 238


>gi|124265324|ref|YP_001019328.1| glutamine transport system substrate-binding protein [Methylibium
           petroleiphilum PM1]
 gi|124258099|gb|ABM93093.1| glutamine transport system substrate-binding protein [Methylibium
           petroleiphilum PM1]
          Length = 285

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 70/222 (31%), Gaps = 7/222 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +     F      G+  GF +D  +A+++    +   ++++    +  F ALQ
Sbjct: 53  KVYVVGTDAAYAPFEFQNEKGEIVGFSIDLLQAVAAKGGFE---VKFVNTPWEGIFNALQ 109

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
               D+L  +   T  R+    + F    +   Q   +     ++    L    + VQ G
Sbjct: 110 QGDRDLLISSITITDERK--QTMDFSNPYFDAFQLIAVKATSKVAKFDDLKKLKVGVQTG 167

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +  +      +    +   FE          A   DA   D   +      N   + 
Sbjct: 168 TTGDEVVTKLQGKN--SANVKRFESTPLALKELEAGGVDAVVADNGVIINYVTNNAGANF 225

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +     +      A+ +G+ E    V+    A+       
Sbjct: 226 KTVSDSAFAPEQYGIAVKKGNAELLEKVNKGIAAIKADGSYD 267


>gi|292899027|ref|YP_003538396.1| arginine ABC transporter substrate-binding protein [Erwinia
           amylovora ATCC 49946]
 gi|291198875|emb|CBJ45985.1| arginine ABC transporter, substrate-binding protein [Erwinia
           amylovora ATCC 49946]
          Length = 248

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L   +                ++         F  + AN   +GFD
Sbjct: 6   MKKIVIAALLAGYSLSAGASQ-------------TIRFAAEASYPPFEFIDANNKIQGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I  D     +          +L+ ++ D +    D T  RE    + F  
Sbjct: 53  VDLANALCREIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++SV  L G  + VQ GTT +  +A+           + ++  +
Sbjct: 108 AYYDNSALFITQKG-KVASVDALKGKRVGVQNGTTHQKYIAEKLPE----VKVVPYDSYQ 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N    P    +       S L  A+ QG++E  
Sbjct: 163 NAILDLKNGRLDAVFGDTAVVNEWLKKNPELAPLGEKVTDKSYFGSGLGIAVRQGNSELQ 222

Query: 239 NIVSWTH 245
             ++   
Sbjct: 223 GKLNAAL 229


>gi|210623567|ref|ZP_03293893.1| hypothetical protein CLOHIR_01843 [Clostridium hiranonis DSM 13275]
 gi|210153437|gb|EEA84443.1| hypothetical protein CLOHIR_01843 [Clostridium hiranonis DSM 13275]
          Length = 274

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 98/283 (34%), Gaps = 27/283 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + +  ++ L   +         S  A  L  +K+ G L   ++     F     
Sbjct: 3   MKKLVSLGMAMVLSLGLVACGNGGGEESSEAADKLDAVKESGKLVVAMSADYPPFEFHST 62

Query: 53  NG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            G      G D D  +A++  I  D   +++  +       AL++ ++D++      T  
Sbjct: 63  KGGEDKVVGVDADLAKAIAKEIGVD---VEFKEMTFDGLVGALKADKVDMVISGMSPTEE 119

Query: 110 REISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R+    + F  + Y      ++   ++  I+S  Q+    +  Q G+  E        A+
Sbjct: 120 RKK--NVDFSEVYYTGKNVLVVREGEEDKITSEDQVKSMKVATQKGSIQETY------AN 171

Query: 168 NMKYH-PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSP 225
            +        E V ++    +    DA   + +         D        LP+  ++  
Sbjct: 172 KIGCTGLKSLESVPDLMMELKNGNVDAVIVNDTVGLINVNQIDGIALSSFNLPEGDAEES 231

Query: 226 LAPAIIQ-GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
           +A A+ +  +T +   ++      V  +     + N    +++
Sbjct: 232 MAIAVKKGNNTAYLEAINKAVKDFVANDLQKSLEDNSALAAQE 274


>gi|317404629|gb|EFV85029.1| amino-acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 261

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 76/256 (29%), Gaps = 18/256 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +  F++ L  +     + + +   L  IK  G  K G       F    A+G   G
Sbjct: 1   MKLLRSLFIAGLVQVAALSAAHAQSG--LDQIKSAGVFKIGTEGTYAPFTFHDASGQLTG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  RA++  +        ++          L +K+ D +      T  R       F
Sbjct: 59  FDVDIGRAIAQRLGVKAE---FVEGKWDGLIAGLDAKRYDAVINQVGITDARRA--KYDF 113

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I+      I S + L G        T+    LA    A       +  +
Sbjct: 114 SDPYISSAAVLIVRDDNTTIKSFADLKGRKSA-NTLTSNFGKLAQSHGA-----EVVAVQ 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236
              E      + R +A   D  +    K         +   D     S     + + + E
Sbjct: 168 GFNEAIDLLTSGRVEATVNDNLSFLDFKKQKPNAKVKIAATDKAAEFSNSGVLLRKNNPE 227

Query: 237 WYNIVSWTHYAMVTAE 252
               ++    A + A+
Sbjct: 228 LVAAINKAL-ADIKAD 242


>gi|229071661|ref|ZP_04204878.1| Arginine-binding extracellular protein artP [Bacillus cereus
           F65185]
 gi|228711456|gb|EEL63414.1| Arginine-binding extracellular protein artP [Bacillus cereus
           F65185]
          Length = 259

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNEESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   +++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKASEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTV 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|168234124|ref|ZP_02659182.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168822994|ref|ZP_02834994.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194470856|ref|ZP_03076840.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197264655|ref|ZP_03164729.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|200389342|ref|ZP_03215953.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|194457220|gb|EDX46059.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197242910|gb|EDY25530.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|199601787|gb|EDZ00333.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205331855|gb|EDZ18619.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205340677|gb|EDZ27441.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320085428|emb|CBY95209.1| Cystine-binding periplasmic protein CBP; Protein fliY; Sulfate
           starvation-induced protein 7; SSI7; Flags: Precursor
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|322616947|gb|EFY13855.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618187|gb|EFY15079.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625857|gb|EFY22676.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626309|gb|EFY23119.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632724|gb|EFY29469.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639066|gb|EFY35759.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640507|gb|EFY37160.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322649895|gb|EFY46316.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655503|gb|EFY51811.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660281|gb|EFY56519.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662962|gb|EFY59169.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668147|gb|EFY64306.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674093|gb|EFY70187.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675554|gb|EFY71628.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683034|gb|EFY79050.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686728|gb|EFY82706.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195383|gb|EFZ80563.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199274|gb|EFZ84369.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204439|gb|EFZ89445.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207529|gb|EFZ92477.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211854|gb|EFZ96685.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217514|gb|EGA02233.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219589|gb|EGA04073.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323223592|gb|EGA07907.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231536|gb|EGA15649.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235979|gb|EGA20058.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240549|gb|EGA24592.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245441|gb|EGA29441.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250211|gb|EGA34103.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253978|gb|EGA37802.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255495|gb|EGA39256.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262092|gb|EGA45655.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266215|gb|EGA49705.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270676|gb|EGA54117.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 266

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|157161392|ref|YP_001458710.1| cystine transporter subunit [Escherichia coli HS]
 gi|157067072|gb|ABV06327.1| cystine-binding periplasmic protein [Escherichia coli HS]
          Length = 266

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 13/243 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F 
Sbjct: 12  MSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L+  +  +       P        +L SK+ID++      +  R+      F      
Sbjct: 72  QQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTI 126

Query: 125 DGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G   ++ K     + + + L G  + V  GT  E    ++ + +        ++     
Sbjct: 127 SGIQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTK 182

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+
Sbjct: 183 YQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN 240

Query: 243 WTH 245
              
Sbjct: 241 DAI 243


>gi|306843855|ref|ZP_07476450.1| extracellular solute-binding protein [Brucella sp. BO1]
 gi|306275610|gb|EFM57334.1| extracellular solute-binding protein [Brucella sp. BO1]
          Length = 268

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 84/254 (33%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +    A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITIGNMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++         ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDEM---KAKCEFVTQEWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G    K   I   +   L+G +I VQ  TT     A+Y +          +  
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234
            EE        R DA   D   L     + D     ++           P    AI +G 
Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231

Query: 235 TEWYNIVSWTHYAM 248
            E     +    A+
Sbjct: 232 PELVAKFNAAIKAI 245


>gi|256061053|ref|ZP_05451209.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261325055|ref|ZP_05964252.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261301035|gb|EEY04532.1| extracellular solute-binding protein [Brucella neotomae 5K33]
          Length = 268

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 87/254 (34%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D  + +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFNASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G    K   I   +   L+G +I VQ  TT     A+Y +          +  
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234
            EE        R DA   D   L     + D     ++           P    AI +G 
Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231

Query: 235 TEWYNIVSWTHYAM 248
            E     +    A+
Sbjct: 232 PELVAKFNAAIKAI 245


>gi|168462508|ref|ZP_02696439.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195634303|gb|EDX52655.1| cystine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 266

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKAL---LKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|13474707|ref|NP_106276.1| ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
 gi|14025462|dbj|BAB52062.1| ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
          Length = 257

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 9/222 (4%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +    LK G       F  + ++G   GFD+D   AL + +  +    + +  +      
Sbjct: 26  QAAEKLKIGTEGAYPPFNTITSDGKVVGFDIDIANALCAQMKVE---CEIVTQDWDGIIP 82

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS--VSQLSGASI 148
           ALQ+K+ D +  +   T  R+  +   F    Y      +  K   ++S   + L+G ++
Sbjct: 83  ALQAKKFDAIIASMSITEERKKQVA--FTNKYYTTPLALVAPKDSDLTSADPAALAGKTV 140

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             QA TT      + +     +     +   EE        R DA   D   L       
Sbjct: 141 GAQASTTQADYAQNTYGKAGAEAKL--YPTQEEAITDLTNGRLDAVISDKFVLVDWLKKA 198

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 ++     +++    A+   DT   + ++    A+V 
Sbjct: 199 SDGCCKLVGDVKGTETQAGIAVRLDDTALRDKLNAAIDAIVA 240


>gi|320334510|ref|YP_004171221.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM
           21211]
 gi|319755799|gb|ADV67556.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           maricopensis DSM 21211]
          Length = 251

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 18/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++   +L  T+    A     IK  G +K         F   +      GF+
Sbjct: 1   MKR----TLVLFAVLAATASPAQARTWDQIKSSGTIKIATEGAFKPFNYFEGK-TLTGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +     K+Q++        + L   + D +  +   T  R+    + F  
Sbjct: 56  VELGNAIAKQLG---MKVQWVTQPFDGLLIGLNQDRYDFVIASHGITPERQK--AVDFSA 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++   G I+ K  G  +   LSG  + VQ GTT    +               + +  
Sbjct: 111 P-HYCTGGLIVSKTGGPKTAKDLSGKIVAVQVGTTYLDNVKKVAGVK----SVKTYPKDT 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A    R DA+  D     A+      P +     D++ +  +  A+ +G+      
Sbjct: 166 DAQQAIMMGRADAWVSDKFL--AIDAIKANPGKLQQ-GDLLFQERIGMAVKKGNASLLKE 222

Query: 241 VSWTHY 246
           ++ T  
Sbjct: 223 LNTTLQ 228


>gi|118479347|ref|YP_896498.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|196047230|ref|ZP_03114446.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB108]
 gi|225866136|ref|YP_002751514.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB102]
 gi|229186398|ref|ZP_04313562.1| Arginine-binding extracellular protein artP [Bacillus cereus BGSC
           6E1]
 gi|118418572|gb|ABK86991.1| L-arginine-binding protein [Bacillus thuringiensis str. Al Hakam]
 gi|196021979|gb|EDX60670.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB108]
 gi|225788838|gb|ACO29055.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB102]
 gi|228597025|gb|EEK54681.1| Arginine-binding extracellular protein artP [Bacillus cereus BGSC
           6E1]
 gi|324328061|gb|ADY23321.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 259

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKVTGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|118470248|ref|YP_887061.1| glutamate binding protein [Mycobacterium smegmatis str. MC2 155]
 gi|118171535|gb|ABK72431.1| glutamate binding protein [Mycobacterium smegmatis str. MC2 155]
          Length = 273

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 92/278 (33%), Gaps = 18/278 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    ++   I L F + +      G       +  G      G    + +G   GFDVD
Sbjct: 6   KRVAGAVALAIALPFAATACGGGDSGGDSD--TIVIGTKYDQPGLGLKQPDGTLTGFDVD 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + +++ +     +I++    + +R   +Q+ Q+D ++     T  R+    + F    
Sbjct: 64  VAKYVANELGYSEDQIEWKEAPSAQRETLIQNGQVDFIAATYSITDSRKE--KVDFAGPY 121

Query: 123 YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              GQ  ++       + +    +   +C  +G+T    + D +           ++   
Sbjct: 122 LITGQSLLVRADNNDITGAASLENNKKLCSVSGSTPAQRIKDEYP----GVQLQQYDTYS 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A +    DA T D   L      +  P    ++ D  S+      + + DTE  N 
Sbjct: 178 ACVEALKNGAVDALTTDEVILAGYAAQS--PGTFKLVGDTFSEERYGIGLKKDDTELRNK 235

Query: 241 VSWTHY------AMVTAEELGITQKNINQVSKDTTNPD 272
           ++          A   A +  +    I        + D
Sbjct: 236 INDAIEKMESSGAWKEAFDKNLGPAGIQAPQPPAVDRD 273


>gi|81428470|ref|YP_395470.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610112|emb|CAI55161.1| Putative amino acid ABC transporter, substrate-binding lipoprotein
           precursor [Lactobacillus sakei subsp. sakei 23K]
          Length = 267

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 80/241 (33%), Gaps = 8/241 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                   I++R  +  GI+   V     + NG   GFDV+  +A+         ++ + 
Sbjct: 27  QKTDSWATIERRQKVVIGIDDSFVPMTYREKNGQLTGFDVELAKAIFK---GSGIQVDFQ 83

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            ++   +   L ++ ID++      T  R   +   F      + Q  +  K+  ++ ++
Sbjct: 84  SIDWDMKETELNNQTIDLIWSGYSKTEERAKRVA--FSQPYLTNHQMIVSMKQNPVNRLA 141

Query: 142 QLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            L G ++ VQ G++    L       K       PI+++         +A R      D 
Sbjct: 142 DLKGQNLGVQTGSSGMAQLDRRPTVLKQKIANQTPILYDTYNNAFIDLQAKRIKGILIDQ 201

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
                         +   +    +    A  +   D +    ++  +  +    +L   Q
Sbjct: 202 VYANFEIKARANGQDFQAIESPFAAEKFAVGMRPEDQKLRRFINRRYQVLKQNGQLAKIQ 261

Query: 259 K 259
            
Sbjct: 262 A 262


>gi|329934517|ref|ZP_08284558.1| sugar-binding protein [Streptomyces griseoaurantiacus M045]
 gi|329305339|gb|EGG49195.1| sugar-binding protein [Streptomyces griseoaurantiacus M045]
          Length = 337

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 81/240 (33%), Gaps = 15/240 (6%)

Query: 16  FFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKAN----GDWKGFDVDFCRALSS 69
             +    +   +  IK R    L  G++     +     N     + +GFD+D  R ++ 
Sbjct: 68  SLSPSEADGDTVKAIKSRAHPRLVIGVDQNSYRWGYRDPNRSGSSELEGFDIDLARRIAR 127

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            I  DP  + +  +   +R  A++S ++D++ R    T  R   +   F    +  GQ  
Sbjct: 128 EILGDPDAVVFRAIPTNQRTEAIRSGRVDMVVRTMTITCDRLRQVA--FSAPYFRTGQQV 185

Query: 130 IMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEIDAA 185
           +  +K  I+     L+   +C   G+T    L     +  +       +      +    
Sbjct: 186 LAPRKSDITGYDDTLAHKRVCSATGSTALTQLTADRGSGRIPPSTDISVTVPNQLDCLVR 245

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  + DA   D +   +    +       +     +      A+ +G  +    V+   
Sbjct: 246 LQLGQVDAVVTDGALAASQAAQDP---TVELKGRPFTTEYYGVAMKKGADDLVRRVNRVL 302


>gi|283852824|ref|ZP_06370087.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
 gi|283571816|gb|EFC19813.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
          Length = 270

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 85/256 (33%), Gaps = 20/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +   +  L  + L     ++           S L  I +RG L  G+      F  V 
Sbjct: 1   MIRFIRIVSLAFVALTMCCGTSVAVTPFDVYEGSNLRKIVQRGTLVVGMELKFWPFEYVD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+  GFDVD  R L+  +      ++   +       AL + +ID++      TL R 
Sbjct: 61  EQGNPVGFDVDIARTLAERLGVK---LEIKDMEWTGLIPALTAGKIDLIISGITGTLERG 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169
            S+       T          K   ++  + L   G  I V+ GTT +L     F     
Sbjct: 118 KSITFTSPYFTTGLCALLSAQKAGDVTDAAALDAPGRIIAVKTGTTADLVATKRFPKA-- 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 +           A R DA+  D  ++   K     P     L    +  P   A
Sbjct: 176 --TINRYSDETACVQEVVAGRVDAFFYDQISI--GKHHRQNPETTKALLTPFTYEPFCIA 231

Query: 230 IIQGDTEWYNIVSWTH 245
           + +GD +W+  +    
Sbjct: 232 LQKGDFDWWQWLESYL 247


>gi|83646475|ref|YP_434910.1| cystine transporter subunit [Hahella chejuensis KCTC 2396]
 gi|83634518|gb|ABC30485.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Hahella chejuensis KCTC
           2396]
          Length = 266

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 13/230 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T       +L  I+KRG ++ G+      F     NG   GF+V+F +AL+  +      
Sbjct: 25  TPSFAAEDLLQSIQKRGSIQVGLEGTYPPFNYQDENGQLTGFEVEFAKALADRLGVKAE- 83

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--K 135
             Y          AL+S+++D++      +  R+      F       G   +  K    
Sbjct: 84  --YQTTKWDGLLAALESERLDVVINQVTISDARKK--KYDFSAPYTVSGIQALTRKDLES 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+  S L+G  + V  GT  E  L    + ++ +     ++         R  R DA  
Sbjct: 140 EINGPSDLAGMKVGVGLGTNYETWL----RENSPQAEVKTYDDDPTKYQDLRFGRIDAIL 195

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D     A +L N       +     S+     A+ +G+ E    +    
Sbjct: 196 IDR--FAAFELLNKTGDALALSGAPFSRQEAGVALRKGNPELLAAIDQAI 243


>gi|146320879|ref|YP_001200590.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis 98HAH33]
 gi|145691685|gb|ABP92190.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis 98HAH33]
 gi|292558356|gb|ADE31357.1| putative amino acid transporter [Streptococcus suis GZ1]
          Length = 315

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 18/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K   + ++ L  +  ++ S NA+     L D++++G L   +N     F         
Sbjct: 47  MKKYIMMGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 106

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D++  +A+   +  +   +++  ++       +QS Q DI       T  R   
Sbjct: 107 DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 163

Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      I++K+     +S+  L+ A+I  Q G+  E  + +   +     
Sbjct: 164 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 217

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I      E+    ++ + +A   +     A    ND                 A A+ 
Sbjct: 218 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 277

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           +G T     V      +V + ++ 
Sbjct: 278 KGSTALKEKVDSVITKLVESGQMD 301


>gi|115360308|ref|YP_777446.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria AMMD]
 gi|115285596|gb|ABI91112.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 260

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    L+ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAAA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G     
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIGFT-TK 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I     +  +      + +   L G SI V+ GTT E     Y+       + + ++  +
Sbjct: 109 IYNQPTRLVVKKGSSLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQD 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
            + A   + R DA   D        L + R + +  +   +    +        + + DT
Sbjct: 167 GVYADLTSGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELIDEKVLGIGAGIGLRKEDT 226

Query: 236 EWYNIVSWTHYAMV 249
           +    +      MV
Sbjct: 227 DLKAKIDRAILDMV 240


>gi|229591447|ref|YP_002873566.1| putative ABC transporter extracellular solute-binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229363313|emb|CAY50429.1| putative ABC transport system, extracellular solute-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 277

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 90/257 (35%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M      + L L  L        A  L DI  +  L CG+   +  F+       +  G 
Sbjct: 1   MGMKHLFTALALGPLAVAI--AQADQLSDIMAKQSLSCGVYADVPPFSAPDPKTRELVGM 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+AL+  +      ++  PL+ + R   ++  ++D++  N  +T  R   +   F 
Sbjct: 59  DVDLCKALAKTMG---VALELKPLSVEARIPEVKMGRVDVIFANLAYTKTRAEQIQ--FS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   +  ++         S      I    G+T+E ++            P+ F+  
Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKDKRISSTKGSTSEQSIR------LAGATPVTFQDT 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWY 238
                A + ++      +      L          + L  + ++  P+   + + +  + 
Sbjct: 168 GSAYMALQQNKVVGLVTNTMTALKLVNQAKAGGVELALAKEPMALEPIGAGMRRDEPAFL 227

Query: 239 NIVSWTHYAMVTAEELG 255
             V+ +  AM  A E+ 
Sbjct: 228 AKVNESLMAMEKAGEID 244


>gi|169832654|ref|YP_001694829.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168995156|gb|ACA35768.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 271

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|145640765|ref|ZP_01796348.1| CTP synthetase [Haemophilus influenzae R3021]
 gi|145274691|gb|EDK14554.1| CTP synthetase [Haemophilus influenzae 22.4-21]
          Length = 257

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 61  VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G         +         KA       +V + +
Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPAAFAFLQGEDALIT 228

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 229 KFNQVLEAL 237


>gi|114566597|ref|YP_753751.1| glutamine ABC transporter glutamine-binding protein [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114337532|gb|ABI68380.1| glutamine ABC transporter, glutamine-binding protein
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 263

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 14/262 (5%)

Query: 1   MYKDFFVSILCLI----ILFFTSFSTNASILGDIK--KRGFLKCGINTGLVGFAEVKANG 54
           M K   V ++ L+    ++         +     +  ++G L  G       F  +  +G
Sbjct: 1   MKKWIKVLMVGLLITGLLVTVIGCKAQQNNNDSAQESQKGKLIVGTEATFPPFEMI-KDG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ GFD+D  RA+  +   +   ++   L       A+QS  ID +          + + 
Sbjct: 60  EYSGFDMDIIRAIGKSQGYE---VEIKNLGFDALIPAVQSGNIDCVIAAVTI--DEDRAK 114

Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F    +  G    + ++   I++   L G  I  Q GTT   T     K  +   + 
Sbjct: 115 VVDFSQPYFDAGLIIAVKQETTGITTTKDLQGKRIAAQVGTTGADTCLK-IKDKDPSTNV 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +FE V E     +    DA   D         T+   S  ++     + S    A+ +G
Sbjct: 174 KIFESVGEAFMELQKGGVDAVINDHPVTADYIKTSGNDSVKMVGEVFSADSQYGIAVKKG 233

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           +++  N ++     +  + E  
Sbjct: 234 NSKLLNDINAGLDELKASGEYE 255


>gi|152969450|ref|YP_001334559.1| arginine 3rd transport system periplasmic binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893921|ref|YP_002918655.1| arginine 3rd transport system periplasmic binding component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|329998468|ref|ZP_08303105.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella sp. MS 92-3]
 gi|150954299|gb|ABR76329.1| arginine 3rd transport system periplasmic binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546237|dbj|BAH62588.1| arginine 3rd transport system periplasmic binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328538658|gb|EGF64754.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella sp. MS 92-3]
          Length = 243

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + AN    GFD
Sbjct: 1   MKKLVLAALLTSFAFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  IDLAHALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    S   L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDAFHSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P      P +         L  A+   +  
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNAALKAI 227


>gi|295401071|ref|ZP_06811045.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976864|gb|EFG52468.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 270

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 13/228 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S      +L  +KK G L+ G       F     +G+  GFDVD  R ++  +   P   
Sbjct: 32  SGKKETDLLAQVKKEGELRIGTEGTYPPFTFHDQSGELTGFDVDLAREVAKRLGVKP--- 88

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++       F  L +K+ D+++        R+      F           ++HK     
Sbjct: 89  VFMETQWDAMFAGLDAKRFDMIANEVGI--RRDRQKKYDFSDPYITSMAVLVVHKDNNKV 146

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +        Q+ T+    LA  + A       +  E   +      + R D    D 
Sbjct: 147 SKFENIKGLKAAQSMTSNFADLARSYGA-----QIVGVEGFNQAVELLSSKRVDVTINDN 201

Query: 199 -SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            S L  L+   + P    I+      S       +G       V+   
Sbjct: 202 LSVLDFLRQKPNAPI--KIVAKHKEASQSGFMFRKGSDTLVEAVNKAL 247


>gi|169827725|ref|YP_001697883.1| cystine-binding periplasmic protein [Lysinibacillus sphaericus
           C3-41]
 gi|168992213|gb|ACA39753.1| Cystine-binding periplasmic protein precursor (CBP) (Protein fliY)
           (Sulfate starvation-induced protein 7) (SSI7)
           [Lysinibacillus sphaericus C3-41]
          Length = 257

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 10/241 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           + +  +I+L     S   S   D        +  GI+             +  GFD+D  
Sbjct: 1   MMLTAVIVLAACGTSKEKSTEKDPSSADQEKIIIGIDDKFAPMGFRDDKNEIVGFDIDLA 60

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA +  +  +     + P++ K +   L S +ID++      T  R+    + F      
Sbjct: 61  RAAAEHMGVEAE---FQPIDWKTKEAELLSGRIDLIWNGYTITDERKE--KVLFTKPYLE 115

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           + Q  +      I  ++ L+G  + +Q+ ++    L      H        F       +
Sbjct: 116 NSQVVMTKADSKIVKLTDLAGTEVGIQSLSSAADALN-GNPIHKEIKTITEFSDNVLALS 174

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             +  R DA   D             P    +L + ++       +  G+      +   
Sbjct: 175 DLKTGRVDAVVIDAVVAEYYMTQ--EPDTFKLLEESLAPEQYGIGVKPGNEALLEKLQAA 232

Query: 245 H 245
            
Sbjct: 233 L 233


>gi|148653873|ref|YP_001280966.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
 gi|148572957|gb|ABQ95016.1| extracellular solute-binding protein, family 3 [Psychrobacter sp.
           PRwf-1]
          Length = 264

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 12/236 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           +     +    ++  T  S +           +   ++         F     +G   GF
Sbjct: 10  RTSLSVLALAAVVGLTGCSKSEDTKAGEATSAEGKTIRIATEGAYPPFNYTNNDGSLGGF 69

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+   +    +K + +  +       L + + D +      T  R  +  + F 
Sbjct: 70  DVDVANAVCEQM---KAKCEIVAQDWDGIIPGLLANKYDAIIAGMSITPERAAT--VDFS 124

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + +   ++  K     S   ++   +  Q  TT    L D F          +++  
Sbjct: 125 APYFSNTMVWLAKKDGS-FSPDDVTNKDLGSQRSTTLGEYLLDNFD-GKDGNKINLYDTY 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E      ++ R DA   +  +        + P   VI  +I +   L  A+ + D 
Sbjct: 183 ENAYLDLKSGRVDAVLAEKVSAADWLP--ENPDYAVIGEEIDNDDHLGIALRKNDP 236


>gi|254248818|ref|ZP_04942138.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124875319|gb|EAY65309.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 279

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 20  MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G     
Sbjct: 72  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIGFT-TK 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I     +  +      + +   L G SI V+ GTT E     Y+       + + ++  +
Sbjct: 128 IYNQPTRLVVKKGSSLLPTAESLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQD 185

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
            + A   A R DA   D        L + R + +  +   +    +        + Q DT
Sbjct: 186 GVYADLIAGRLDAALQDEVQAAIGFLKSPRGANYTFVGPELVDEKMLGIGAGIGLRQEDT 245

Query: 236 EWYNIVSWTHYAMV 249
           +    +    + MV
Sbjct: 246 DLKAKIDRAIHDMV 259


>gi|323186304|gb|EFZ71654.1| cystine-binding periplasmic protein [Escherichia coli 1357]
          Length = 252

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 13/240 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + L
Sbjct: 1   MAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQL 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +       P        +L SK+ID++      +  R+      F       G 
Sbjct: 61  AKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISGI 115

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             ++ K     I + + L G  + V  GT  E    ++ + +        ++        
Sbjct: 116 QALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQD 171

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+   
Sbjct: 172 LRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAM 229


>gi|254303609|ref|ZP_04970967.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323801|gb|EDK89051.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 253

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 96/259 (37%), Gaps = 18/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V ++ ++ +       N   +  I KRG L  G  +    F  +  NG+ KG+D
Sbjct: 1   MKKILIVLLITIVSVISY---ANNDGVEKILKRGVLYVGTTSDYKPFTYI-ENGEHKGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + ++  +      ++++P   K     LQ+ + DI       T  R+    +    
Sbjct: 57  IEVAKLIAKELGVK---VEFVPTTWKTLLDDLQAGKFDIAMGGITRTTKRQTICNM--TN 111

Query: 121 ITYFDGQGFIMHK--KKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                G+ F++ K  K   +S+  +      + V  G T E  + +Y          I +
Sbjct: 112 PYLVFGKCFLVRKGDKNKYNSLEAVNKPNVRVGVNIGGTNEALVNEYIAKA----TVIRY 167

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   ++  A      D    +       +  N +  E  +L   ++KS +   I + +  
Sbjct: 168 KNNLDVPVALEKGEVDVMITETPEAITYQKNNPK-LEGALLDKTLTKSQMGYMIAKENQH 226

Query: 237 WYNIVSWTHYAMVTAEELG 255
             N V++    +    E+ 
Sbjct: 227 LLNTVNFILSELELRGEIE 245


>gi|5929889|gb|AAD56629.1|AF165218_4 AatB [Streptococcus pneumoniae WU2]
          Length = 278

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYESNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATYER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++         +          
Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSWT 244
            DT     ++  
Sbjct: 236 EDTTLVKKINEA 247


>gi|297160476|gb|ADI10188.1| putative ABC transporter solute-binding protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 338

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 86/263 (32%), Gaps = 22/263 (8%)

Query: 15  LFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66
                 S +   +  IK R       G L  G++     +       GD  GFD++  RA
Sbjct: 62  ASLRPSSASGPAIQRIKNRKVDGHRLGKLIAGVDQNSYRWGYRDPATGDLTGFDIELVRA 121

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  IF DP  + Y  +   +R  ALQ  ++DI+ R        +    +AF    +  G
Sbjct: 122 IAKDIFGDPDAVIYRAIPTSQRVKALQQGKVDIVVRTMTINC--DRLKDVAFSTAYFKAG 179

Query: 127 QGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEID 183
           Q  ++ K   ++  +  L G  +C   G+T E  L       +              +  
Sbjct: 180 QQVLVPKGSSVTGYNTSLRGKKVCTAQGSTAEAELDKEKGGADDLGAIKVDPVPNQLDCL 239

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +  + DA   D +        +       ++    ++     A+ + D +    V+ 
Sbjct: 240 VRLQLGQVDAVITDNALAAGQAAQDP---SVKLVGKPFTEEFYGVAMNKDDEDLVRRVNK 296

Query: 244 THYAMVTAEELGITQKNINQVSK 266
                   E       N   +  
Sbjct: 297 VL------EGYRSGGDNSPWMRA 313


>gi|238019978|ref|ZP_04600404.1| hypothetical protein VEIDISOL_01854 [Veillonella dispar ATCC 17748]
 gi|237863502|gb|EEP64792.1| hypothetical protein VEIDISOL_01854 [Veillonella dispar ATCC 17748]
          Length = 270

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 92/285 (32%), Gaps = 25/285 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  + ++ F +   + +   + +    +  G++            G+  G D+
Sbjct: 4   KKMMAVGLAAVSMMVFVTGCGSDTKTANTELPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +        ++++  ++   +   L+SK+ID L      +  RE    + F   
Sbjct: 64  DMAKEAAKRAG---MEVEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNP 118

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              D Q  ++      I S + L+G  + VQ  +T E  L +   +         +    
Sbjct: 119 YMKDKQYIVVRNDDDSIKSKADLAGKVVGVQQASTGESALQND-PSGKTVKETKSYADFV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239
                    R DA   D     A  L    P ++ I+          A    + DT   +
Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVDGTDYGVDNFAVGFRKDDTALRD 235

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284
            ++                   +     T +  V+++LG     +
Sbjct: 236 NINGIL---------------ADMKKDGTADKIVEKWLGSSADLD 265


>gi|206579100|ref|YP_002239548.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Klebsiella pneumoniae 342]
 gi|288936393|ref|YP_003440452.1| cationic amino acid ABC transporter periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|290510552|ref|ZP_06549922.1| glutamine ABC transporter periplasmic protein [Klebsiella sp.
           1_1_55]
 gi|206568158|gb|ACI09934.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Klebsiella pneumoniae 342]
 gi|288891102|gb|ADC59420.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|289777268|gb|EFD85266.1| glutamine ABC transporter periplasmic protein [Klebsiella sp.
           1_1_55]
          Length = 248

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSVFKVSLAALTLAFAVSSHAANKT---------LVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K ID+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I  V  L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T         + + +       A  +G  E   
Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQNYGIAFPKGSDELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|104774237|ref|YP_619217.1| glutamine-binding protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423318|emb|CAI98159.1| Glutamine-binding protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 292

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77
             S   S     K+   +  G+      F       G  +GF++D   A++  I    SK
Sbjct: 36  CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 95

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
             + P+  K R   L +  +D +      T  R     + F  + +   +  I+ K   I
Sbjct: 96  AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 153

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S++ L+   + V A   T+  +A+       K     F+       A +A + D    D
Sbjct: 154 RSIADLNKKGVVVIAIKGTD--VANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMIDD 211

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              L  L        E  +    +++ P    + +G TE    ++    
Sbjct: 212 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 257


>gi|291617814|ref|YP_003520556.1| FliY [Pantoea ananatis LMG 20103]
 gi|291152844|gb|ADD77428.1| FliY [Pantoea ananatis LMG 20103]
 gi|327394231|dbj|BAK11653.1| cystine-binding periplasmic protein precursor FliY [Pantoea
           ananatis AJ13355]
          Length = 288

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +  + L+  F         +L  +K +G L+ G+      F+     G   GF+V+F + 
Sbjct: 36  MMAVALVAGFSVKTFAADDLLAQVKSKGELRVGLEGTYPPFSFQDEKGKLTGFEVEFAQD 95

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +          P        AL SK+ID++      +  R+      F       G
Sbjct: 96  LAKHMGVKA---VLKPTKWDGMLAALDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 150

Query: 127 QGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              +  KK    I+    L+G  + V  GT  E  L    +A+        ++       
Sbjct: 151 VQALTLKKNAGSITKPEDLAGKKVGVGLGTNYEQWL----RANVKGVDIRTYDDDPTKYQ 206

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R+ R DA   D   L AL L         +     S+     A+ +G+ +    +   
Sbjct: 207 DLRSGRVDAILVDR--LAALDLVKKTGDTMAVAGPAFSRLEAGVALRKGNEDLLKAIDQA 264

Query: 245 H 245
            
Sbjct: 265 I 265


>gi|229816580|ref|ZP_04446879.1| hypothetical protein COLINT_03638 [Collinsella intestinalis DSM
           13280]
 gi|229807915|gb|EEP43718.1| hypothetical protein COLINT_03638 [Collinsella intestinalis DSM
           13280]
          Length = 315

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 91/289 (31%), Gaps = 23/289 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD--------------IKKRGFLKCGINTGLVG 46
           M +   V+     ++     +   +                        L  G +     
Sbjct: 35  MTRRSLVAGAASAVMALALLAGCGATPKATDAGSAPKTAEDTSAAATSKLIVGFDQAYPP 94

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +  V  +G++ GFD+D  +A++  +  +   ++  P++ + +   + S  I+ +      
Sbjct: 95  YGYVGDDGEYTGFDLDLAKAVAEKLDWE---VELEPIDWEAKDALMDSGAINCIWNGFTM 151

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFK 165
               +      F      + Q  ++    GI++ + L+G ++  Q  +  E  L  D   
Sbjct: 152 EGRED---DYTFSDPYMLNAQVIVVRADDGIAAQADLAGKTVVTQIDSAAEEVLEGDAAD 208

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                                 +   DA   D+S   A    + +P  +++L + +S+  
Sbjct: 209 LAATFASLETIGEYNTAFMQLESGAVDAVACDLSI--ARYQMSAKPDAYLMLDEYLSEEN 266

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            A    +GDT     V+     +     +               N  ++
Sbjct: 267 YAVGFKKGDTATAKKVAEALKKLYKDGTVEQIAAKYADQGLTMDNWQIK 315


>gi|229019367|ref|ZP_04176191.1| Arginine-binding extracellular protein artP [Bacillus cereus
           AH1273]
 gi|229025613|ref|ZP_04182020.1| Arginine-binding extracellular protein artP [Bacillus cereus
           AH1272]
 gi|228735707|gb|EEL86295.1| Arginine-binding extracellular protein artP [Bacillus cereus
           AH1272]
 gi|228741935|gb|EEL92111.1| Arginine-binding extracellular protein artP [Bacillus cereus
           AH1273]
          Length = 260

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 88/255 (34%), Gaps = 11/255 (4%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWK 57
           M K       L LI+  F++ S       D K +  L  G +     +  V+A+   +  
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKAADSKNKKVLVMGTSADYKPYEYVEASKSDEII 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  + +   +  +   ++   ++      +L S ++D +      T   +      
Sbjct: 61  GFDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTA--DRKNNAD 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  I +      +  K   I S+  L G  + VQ G+  E    ++ K  + K      +
Sbjct: 116 FTDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--D 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           R+ EI    +A R DA   + +             + + + +   +   A A+ +   + 
Sbjct: 174 RIPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKT 232

Query: 238 YNIVSWTHYAMVTAE 252
                         E
Sbjct: 233 EEFNKVIKKMQENGE 247


>gi|224823995|ref|ZP_03697103.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
 gi|224603414|gb|EEG09589.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
          Length = 256

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 89/253 (35%), Gaps = 23/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    +           K+   ++ G++     F     +G   GFD
Sbjct: 1   MNKLVLAVTLGLALGSVNA-----------KELTVIRFGLDPSYAPFESKSPDGKLVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +     + +++         AL++K+ D +  +   T  R     +AF  
Sbjct: 50  IDIGNAICDKL---KVRCEWVENAWDGIIPALKAKKFDAILSSMSVTEKR--QQQIAFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +  K   ++SV  L G  I V+ G+T E     Y++ +      + ++  +
Sbjct: 105 KVYHTPSRLVARKNAALTSVESLKGKRIGVEQGSTQEAYAKQYWEPNG--VTVVSYQNQD 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
            +     + R DA   D        L   R  ++  +  ++  +       A  + + D 
Sbjct: 163 LVYQDLLSGRLDAALQDSVQADMSLLKTPRGRDYAFVGPVLHDAKTLGVGAAIGLRKEDQ 222

Query: 236 EWYNIVSWTHYAM 248
           E    ++    A+
Sbjct: 223 ELRQRINQAITAI 235


>gi|325957194|ref|YP_004292606.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           acidophilus 30SC]
 gi|325333759|gb|ADZ07667.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           acidophilus 30SC]
          Length = 286

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 30/263 (11%)

Query: 2   YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43
            K F   +S++  +++  ++                  +N + +  IK+RG+++ G+   
Sbjct: 4   RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGSGWSNNNSVTQIKRRGYIRIGVYGD 63

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L  +  V + G   GFD+   R L+  +   P   ++  LN   R  AL S ++D++  N
Sbjct: 64  LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSNKVDMVLAN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +  K   I+S  QL G  + +  G+T E      
Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
             A+      + F+   +   A +  R  A   D S LYA       P   V +  I   
Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231

Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246
             +APA+ +G+       +    
Sbjct: 232 QFIAPAVKKGNKSLLKWTNKQIN 254


>gi|298252814|ref|ZP_06976608.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis 5-1]
 gi|297533178|gb|EFH72062.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis 5-1]
          Length = 255

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 9/218 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  ++ GI     G      +G + GFDVD  + ++  +     +I +    +K+R   L
Sbjct: 12  KKVIRIGIKFDQPGMGFK-KSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETML 70

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151
           Q+  +D++      T  R+    ++F    +  GQ  ++ K +  +S  + L G  +C  
Sbjct: 71  QNGDVDMIVATYSITDARKKM--VSFAGPYFIAGQDLLIRKDEHKVSGPNDLDGKRLCSV 128

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +G+T+ + + + + +   K   +      E   A  +   DA T D   L  L   +   
Sbjct: 129 SGSTSAIAIKERYSS---KVQLMQQPGYAECATALFSGIVDAVTTDDIILAGLATASR-- 183

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
               ++    +       I +G+T     ++     M+
Sbjct: 184 GRLKLVGKPFTAEYYGIGIKKGNTGLAKKINAALKDMI 221


>gi|239616531|ref|YP_002939853.1| extracellular solute-binding protein family 3 [Kosmotoga olearia
           TBF 19.5.1]
 gi|239505362|gb|ACR78849.1| extracellular solute-binding protein family 3 [Kosmotoga olearia
           TBF 19.5.1]
          Length = 240

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  +  F                      G +     F  V  NG++KGFD
Sbjct: 1   MRKLSLVILLVALAAFAFG--------------KTYVVGTSADFPPFEYV-ENGEFKGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA++  +  +   I+ + ++      AL S  +DI+      T  RE    + F  
Sbjct: 46  MDLIRAIADEMGFN---IKIVDMSFDSLIAALVSGNLDIVIAGMTITAEREAV--VDFSK 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             +   Q  I+ +    +         I VQ GTT +L + +      +       ++  
Sbjct: 101 PYWTADQSIIVKEDSDYTVTVLFGKHDIGVQTGTTGDLWVEENLVKTKILTGKFKRYDTF 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                       DA   D     A +    RP    I+  I++      A+ +G+ E  N
Sbjct: 161 VLALTDLINGNVDAIVLDSP--VAERFAETRPV--KIVGIIVTGEEYGIAVREGNKELLN 216

Query: 240 IVSWTHY 246
           +++    
Sbjct: 217 LINEGIQ 223


>gi|196034782|ref|ZP_03102190.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus W]
 gi|228925612|ref|ZP_04088701.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228944165|ref|ZP_04106544.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|301052081|ref|YP_003790292.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Bacillus anthracis CI]
 gi|195992825|gb|EDX56785.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus W]
 gi|228815554|gb|EEM61796.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228834090|gb|EEM79638.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|300374250|gb|ADK03154.1| amino acid ABC transporter, periplasmic amino acid-binding protein;
           bacterial extracellular solute-binding protein, family 3
           [Bacillus cereus biovar anthracis str. CI]
          Length = 264

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|16130245|ref|NP_416813.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89109130|ref|AP_002910.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           str. K-12 substr. W3110]
 gi|157157871|ref|YP_001463654.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E24377A]
 gi|157161797|ref|YP_001459115.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli HS]
 gi|170019381|ref|YP_001724335.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|170081926|ref|YP_001731246.1| lysine/arginine/ornithine ABC transporter periplasmic-binding
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188494040|ref|ZP_03001310.1| putative histidine ABC transporter, periplasmic histidine-binding
           protein [Escherichia coli 53638]
 gi|191169481|ref|ZP_03031215.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B7A]
 gi|194432905|ref|ZP_03065189.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           dysenteriae 1012]
 gi|194436153|ref|ZP_03068255.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 101-1]
 gi|238901485|ref|YP_002927281.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           BW2952]
 gi|253772766|ref|YP_003035597.1| cationic amino acid ABC transporter periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162319|ref|YP_003045427.1| lysine/arginine/ornithine transporter subunit [Escherichia coli B
           str. REL606]
 gi|256022005|ref|ZP_05435870.1| lysine/arginine/ornithine transporter subunit [Escherichia sp.
           4_1_40B]
 gi|297516046|ref|ZP_06934432.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli OP50]
 gi|300948541|ref|ZP_07162635.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 116-1]
 gi|300956422|ref|ZP_07168713.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 175-1]
 gi|301023557|ref|ZP_07187321.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 196-1]
 gi|301647587|ref|ZP_07247384.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 146-1]
 gi|307138975|ref|ZP_07498331.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H736]
 gi|309793193|ref|ZP_07687621.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 145-7]
 gi|331642949|ref|ZP_08344084.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli H736]
 gi|3183509|sp|P09551|ARGT_ECOLI RecName: Full=Lysine-arginine-ornithine-binding periplasmic
           protein; Short=LAO-binding protein; Flags: Precursor
 gi|1788649|gb|AAC75370.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           str. K-12 substr. MG1655]
 gi|1799691|dbj|BAA16156.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           str. K12 substr. W3110]
 gi|157067477|gb|ABV06732.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli HS]
 gi|157079901|gb|ABV19609.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E24377A]
 gi|169754309|gb|ACA77008.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|169889761|gb|ACB03468.1| lysine/arginine/ornithine transporter subunit; periplasmic-binding
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|188489239|gb|EDU64342.1| putative histidine ABC transporter, periplasmic histidine-binding
           protein [Escherichia coli 53638]
 gi|190900483|gb|EDV60298.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B7A]
 gi|194418893|gb|EDX34978.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           dysenteriae 1012]
 gi|194424881|gb|EDX40866.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 101-1]
 gi|238861696|gb|ACR63694.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           BW2952]
 gi|242377943|emb|CAQ32712.1| argT, subunit of lysine/arginine/ornithine ABC Transporter
           [Escherichia coli BL21(DE3)]
 gi|253323810|gb|ACT28412.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974220|gb|ACT39891.1| lysine/arginine/ornithine transporter subunit [Escherichia coli B
           str. REL606]
 gi|253978387|gb|ACT44057.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|260448596|gb|ACX39018.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli DH1]
 gi|299880792|gb|EFI89003.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 196-1]
 gi|300316771|gb|EFJ66555.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 175-1]
 gi|300451951|gb|EFK15571.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 116-1]
 gi|301074277|gb|EFK89083.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 146-1]
 gi|308123479|gb|EFO60741.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 145-7]
 gi|315136945|dbj|BAJ44104.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           DH1]
 gi|315615579|gb|EFU96211.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 3431]
 gi|320178715|gb|EFW53678.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Shigella boydii ATCC 9905]
 gi|323940993|gb|EGB37180.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E482]
 gi|323961383|gb|EGB56994.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H489]
 gi|323973106|gb|EGB68299.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TA007]
 gi|331039747|gb|EGI11967.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli H736]
 gi|332088441|gb|EGI93559.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           boydii 5216-82]
 gi|332090099|gb|EGI95198.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           dysenteriae 155-74]
          Length = 260

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   T+ S+ A++         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|322616361|gb|EFY13270.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322619611|gb|EFY16486.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322622693|gb|EFY19538.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322628605|gb|EFY25392.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322631542|gb|EFY28298.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322637069|gb|EFY33772.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322641732|gb|EFY38368.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322644475|gb|EFY41015.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322650064|gb|EFY46481.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322654143|gb|EFY50466.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322658058|gb|EFY54325.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322663532|gb|EFY59734.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322670268|gb|EFY66408.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322671504|gb|EFY67626.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322676860|gb|EFY72927.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322682785|gb|EFY78804.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322686464|gb|EFY82446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|323196082|gb|EFZ81245.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323196772|gb|EFZ81916.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323202949|gb|EFZ87983.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323208989|gb|EFZ93926.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323211894|gb|EFZ96722.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323215174|gb|EFZ99919.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323222377|gb|EGA06755.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323229852|gb|EGA13975.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323233077|gb|EGA17173.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323240812|gb|EGA24854.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323243129|gb|EGA27149.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323248671|gb|EGA32599.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323251672|gb|EGA35539.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323257340|gb|EGA41038.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323261928|gb|EGA45494.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
 gi|323267944|gb|EGA51423.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323271989|gb|EGA55404.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
          Length = 243

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + A+    GFD
Sbjct: 1   MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    + + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN +  P+   +       + L  A+   +    
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKSLL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNNALAAI 227


>gi|270261832|ref|ZP_06190104.1| hypothetical protein SOD_b00390 [Serratia odorifera 4Rx13]
 gi|270043708|gb|EFA16800.1| hypothetical protein SOD_b00390 [Serratia odorifera 4Rx13]
          Length = 257

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L+          A     I        G++ G   F  +  +G+  GFD
Sbjct: 1   MKK----TLAVLLTSLALGGPAAAQSFDTI------SFGVDGGYPPFDVLSPSGEITGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    +K  ++    +    AL +++ D +  +   T  R+    + F  
Sbjct: 51  IDIANALCTQL---HAKCVFVKQPFESMIAALNARKFDAIIASLTITDERKK--EVDFTD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    +   + L G ++ VQ G+  E     ++         + +   
Sbjct: 106 RYYRSSAQLVARKGSPLLPDAASLKGKTVGVQTGSIHETYAKKHWA--GQGVKIVSYANQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D +   +  +   R  +       I+ S +      A+ + + 
Sbjct: 164 DNVYLDLMSGRINASLQDNTQAASSFIDTPRGQKFAFAGPAITDSSISSDVGIAVGKDNP 223

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 224 ALRDALNGAIKAI 236


>gi|183598314|ref|ZP_02959807.1| hypothetical protein PROSTU_01704 [Providencia stuartii ATCC 25827]
 gi|188020488|gb|EDU58528.1| hypothetical protein PROSTU_01704 [Providencia stuartii ATCC 25827]
          Length = 247

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  T+            ++  ++         F     N    GFD
Sbjct: 1   MKKIILAALLGAVTLSATAA-----------EKETIRFATEATYAPFEMFDKNNQIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +   +      +L+ ++ + L    D T   +    + F  
Sbjct: 50  VDLANAMCEKM---NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITP--DRQKQVDFTD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K+  +SSV QL G  I VQ GTT +  + +  K        + ++  +
Sbjct: 105 TYYPNSAEFIAIKE-KVSSVDQLKGKKIGVQNGTTHQKYIMEQHK----DMTTVPYDNYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISKSPLAPAIIQGDTE 236
                 +  R DA  GD +               P    +         L  A+ +G+ E
Sbjct: 160 SAILDLQNGRIDAVFGDTAVADEWLKAKGNENLAPVGEKVTDPQYFGIGLGIAVRKGNKE 219

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 220 LLDKMNKAL 228


>gi|170770039|ref|ZP_02904492.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia albertii TW07627]
 gi|170121105|gb|EDS90036.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia albertii TW07627]
          Length = 243

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN    GFD
Sbjct: 1   MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESMDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DAYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAV 227


>gi|311280311|ref|YP_003942542.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
 gi|308749506|gb|ADO49258.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
          Length = 248

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSVLKVSLAALTLAFAVSSQAA---------NKQLVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDY---TMKPMDFSGIIPALQTKNVDVALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + + +       A  +G  E   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|206576658|ref|YP_002237705.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Klebsiella pneumoniae 342]
 gi|288934565|ref|YP_003438624.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290508765|ref|ZP_06548136.1| cystine transport system substrate-binding protein [Klebsiella sp.
           1_1_55]
 gi|206565716|gb|ACI07492.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Klebsiella pneumoniae 342]
 gi|288889274|gb|ADC57592.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289778159|gb|EFD86156.1| cystine transport system substrate-binding protein [Klebsiella sp.
           1_1_55]
          Length = 266

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 86/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M          +  + ++     S       ++L  +K+RG L+ G+      F+    +
Sbjct: 1   MKLALLGRQALMGAMAVVLMAGVSVKTFAAENLLNQVKERGTLRVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTISGVQALVKKGNEGAIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +   +  +  S+     A+ 
Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    +    
Sbjct: 230 KGNDDLLKAIDAAI 243


>gi|326797191|ref|YP_004315011.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326547955|gb|ADZ93175.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 268

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 89/252 (35%), Gaps = 18/252 (7%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    +     +     L  +S ++ AS + DI   G LK     G + F     +G + 
Sbjct: 1   MKFGYQKALTGLALASALVVSSQASAASAIDDILSSGELKVCFEAGYIPFEMKTKDGRYI 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  + ++ ++      I            ALQ+K+ DI+      T  R  +L + 
Sbjct: 61  GFDIDIGKHMARSMDVKYVPIN---TAWDGIIPALQTKKCDIIMGGMTITASR--NLSVM 115

Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173
           F       GQ  ++  +    I S   L+    +I  Q GTT       Y          
Sbjct: 116 FSNSYISIGQTVVIKPELKGIIKSYKDLNKSEYTITSQIGTTGAEAARKYLPKA----TL 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +FE   +        + DA+  D+         +    EH  L    +  PL  AI Q 
Sbjct: 172 DLFETSADGVLQVANGKADAFVYDLPFNALYASQHPDTVEH--LSTSFTYEPLGWAIRQD 229

Query: 234 DTEWYNIVSWTH 245
           D  + N ++   
Sbjct: 230 DPNFLNFLNNYL 241


>gi|168777344|ref|ZP_02802351.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|187767379|gb|EDU31223.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str.
           EC4196]
          Length = 266

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + LI         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALIARMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|161504004|ref|YP_001571116.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865351|gb|ABX21974.1| hypothetical protein SARI_02097 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 248

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSILKVSLAALTLAFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +  D       P++      ALQ+K ID+       T  R+    + F  
Sbjct: 51  IDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + + +       A  +G  E   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKSVGESLEAQQYGIAFPKGSNELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|158316704|ref|YP_001509212.1| extracellular solute-binding protein [Frankia sp. EAN1pec]
 gi|158112109|gb|ABW14306.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec]
          Length = 341

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 84/224 (37%), Gaps = 10/224 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +   L  I  RG+L  G+      F     + G+++GFDVD    +  A+F     +++ 
Sbjct: 96  DGPTLRKIADRGYLTVGVRPDTPPFGSRNPDTGEFEGFDVDLALLVGRALFGADGHVRFR 155

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            +   +R   ++   +D+++     T   + +  + F    Y   +  ++ +      ++
Sbjct: 156 AVTGADRVALVRDGTLDLVAATLTITC--DRADEVDFSAPYYLTAKAVLVLEDAPYQGLA 213

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  +C  AGTT+   + D       +  PI      +   A +A   +A   D + L
Sbjct: 214 DLGGRRVCAAAGTTSLQQVVDAP----SRPIPIQLASPADCLVAMQAGTVEAIVNDEAVL 269

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +   +    E  I+        +  A+ +   +    V+   
Sbjct: 270 VGMVEQDP---ETRIVGVGAFDVAMGIAVAKDAPDLTRFVNGVL 310


>gi|148993047|ref|ZP_01822641.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|168489558|ref|ZP_02713757.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP195]
 gi|147928248|gb|EDK79265.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|183572012|gb|EDT92540.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP195]
 gi|332073701|gb|EGI84180.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA17570]
          Length = 271

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++ L ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEILSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|239502917|ref|ZP_04662227.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter baumannii AB900]
 gi|193077848|gb|ABO12725.2| ABC Lysine-arginine-ornithine transporter periplasmic ligand
           binding protein [Acinetobacter baumannii ATCC 17978]
          Length = 257

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 1   MKKIFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R     + F  
Sbjct: 52  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    + + + L G  + VQ GT  E     Y+    +    + +   
Sbjct: 107 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +          +          A  + + D
Sbjct: 165 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDVKTLGVGAAIGLRKED 224

Query: 235 TEWYNIVSWTHYAMVT 250
            +    +     A++ 
Sbjct: 225 ADLKANIDKALAAIIA 240


>gi|152969397|ref|YP_001334506.1| glutamine ABC transporter periplasmic protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893865|ref|YP_002918599.1| glutamine ABC transporter periplasmic protein [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262041101|ref|ZP_06014319.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|150954246|gb|ABR76276.1| glutamine ABC transporter periplasmic-binding protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546181|dbj|BAH62532.1| glutamine ABC transport system periplasmic binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259041551|gb|EEW42604.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 248

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSVFKVSLAALTLAFAVSSHAANKT---------LVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K ID+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I  V  L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T         + + +       A  +G  E   
Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQNYGIAFPKGSDELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|154175327|ref|YP_001409170.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
 gi|153793217|gb|ABS50425.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
          Length = 257

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 17/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+   F   L L  L     +   S L  IKK G ++         ++      +  G+D
Sbjct: 1   MFLQKFAKFLTLASLAICVGAFGESSLEQIKKGGVIRIATEGTYSPYSFHDEKNELVGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+++ +  +   +Q++         A  + + D++      T  R++     +  
Sbjct: 61  VDVAKAVAAKLGVE---VQFVEAPWDAMLAAFNAGKADVVFNQVSITPERKV--KYDYSE 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+ K    I     L G +    + T+    +A+ + A+      +  +  
Sbjct: 116 PYTTAYGALIVRKDNDSIKKFEDLKGKNSA-HSATSNWAQVAEKYGAN-----VVTVDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEW 237
            +      A R DA   D    +            +      +  P+  A    +G    
Sbjct: 170 SKGVELIIARRADATINDTITFFDFVKQKPDAPIKIA---ATASEPIYSAALFHKGSDTL 226

Query: 238 YNIVSWTHY 246
              V+    
Sbjct: 227 VKAVNKALQ 235


>gi|157156974|ref|YP_001463224.1| cystine transporter subunit [Escherichia coli E24377A]
 gi|157079004|gb|ABV18712.1| cystine-binding periplasmic protein [Escherichia coli E24377A]
 gi|320198614|gb|EFW73214.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Escherichia coli EC4100B]
          Length = 266

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     + + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|323356728|ref|YP_004223124.1| amino acid ABC transporter periplasmic protein [Microbacterium
           testaceum StLB037]
 gi|323273099|dbj|BAJ73244.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Microbacterium testaceum
           StLB037]
          Length = 300

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 10/225 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +     +     +  G+     G       +G+  GFDV+  + +++++  D  KI+Y  
Sbjct: 56  SPTYDRMVAADKVVVGVKEDQPGLGFKDPISGERGGFDVEISQWIAASLGFDADKIEYKT 115

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141
           + +  R   L +  ID        T  R+    + F       GQG ++      I   +
Sbjct: 116 IPSANREQELVNGNIDYYVGTYSITDKRKA--QIDFAGPYLITGQGLLVAADNEDIKGPN 173

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  +C   G+T    + D +         + ++   +     RA   DA T D + L
Sbjct: 174 DLAGKIVCSVTGSTPLQRIRDEY----SPGDTVEYDTYTQCLEQLRAGSVDAVTTDQAIL 229

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    P    I  D  S+      + +GDT   + ++    
Sbjct: 230 AGYVAQ--EPEAFKIAGDTFSEERYGVGLPKGDTVLKDHINTLFN 272


>gi|306840465|ref|ZP_07473224.1| extracellular solute-binding protein [Brucella sp. BO2]
 gi|306289480|gb|EFM60698.1| extracellular solute-binding protein [Brucella sp. BO2]
          Length = 268

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 84/254 (33%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +    A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITIGNMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGSLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++         ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDEM---KAKCEFVTQEWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G    K   I   +   L+G +I VQ  TT     A+Y +          +  
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234
            EE        R DA   D   L     + D     ++           P    AI +G 
Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231

Query: 235 TEWYNIVSWTHYAM 248
            E     +    A+
Sbjct: 232 PELVAKFNAAIKAI 245


>gi|254253412|ref|ZP_04946730.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124896021|gb|EAY69901.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 266

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|293393701|ref|ZP_06638010.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Serratia odorifera DSM 4582]
 gi|291423823|gb|EFE97043.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Serratia odorifera DSM 4582]
          Length = 279

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 84/224 (37%), Gaps = 13/224 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L DIK+ G ++  +      F  +   +    G+DVD   A+  A+      ++    
Sbjct: 25  DKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDIADAIGKALGVK---VELRAT 81

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           N   R   L +K++D+++ N   T  R     + F    +  GQ FI  K   + +   +
Sbjct: 82  NPANRIPLLAAKKVDLIAANFTITEQRAK--EVNFSVPYFATGQKFIARKG-VLKTPEDI 138

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
               I    GT  E+TL +++         I ++       A R     A T D + L  
Sbjct: 139 KTLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFVALRNGNVQAITQDDAKLVG 194

Query: 204 LKLTN--DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L       + ++  I P  I+K      I +G+      ++ T 
Sbjct: 195 LLGNLTPAQKADFEISPFSITKEYQGIGIPKGEERLTATINDTL 238


>gi|304395814|ref|ZP_07377697.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
 gi|304357108|gb|EFM21472.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
          Length = 248

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 84/249 (33%), Gaps = 20/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      +  + L F+  ST A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSLLKVSVAALALAFSLSSTAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ++ +D+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTRNVDLALAGITITEERKK--AIEFSDGY 107

Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I  +S L+G  + V++GT +      + K+         F  ++ 
Sbjct: 108 YKSGLQVMVRNNENDIKGISDLNGKVVAVKSGTGSVEYAKAHIKSK----DLRQFPNIDS 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T  +      + D I       A  +G  +    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAVGDSIEAQQYGIAFPKGSDDLREKV 222

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 223 NGALKTLKE 231


>gi|262047081|ref|ZP_06020040.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US]
 gi|312984301|ref|ZP_07791645.1| glutamine-binding protein [Lactobacillus crispatus CTV-05]
 gi|260572658|gb|EEX29219.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US]
 gi|310894319|gb|EFQ43397.1| glutamine-binding protein [Lactobacillus crispatus CTV-05]
          Length = 272

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 85/226 (37%), Gaps = 10/226 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            + ++   +K+   +  G+      F       G  +GF++D  +AL+  +    +K  +
Sbjct: 27  ASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQMLGKDAKTDF 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +   A  R   L++  +D +      T  R     + F    +  G   ++     I +V
Sbjct: 87  VTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVPNNSKIKNV 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++    GTT    +  Y          + ++   +  +A +A++  A T D   
Sbjct: 145 KDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGVALTTDNGL 200

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           L  +    + P  + ++  + S +P   A+ +G  +  + +     
Sbjct: 201 LAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243


>gi|206558740|ref|YP_002229500.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198034777|emb|CAR50644.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 266

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|117617755|ref|YP_856221.1| arginine and ornithine binding protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559162|gb|ABK36110.1| arginine and ornithine binding protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 257

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 24/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +   +   +  +         K+   ++ G+      F+  + +G+ KGFD
Sbjct: 1   MNKLMLATAIVTALSSGSLMA---------KEWKEVRIGVEGAYPPFSWTEPSGEVKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +     K   +  +      AL S++ D +    D T  R+    + F  
Sbjct: 52  IDIANALCEEM---KVKCTLIKQDWDGIIPALLSRKYDAIIATMDITEERKK--KVDFTQ 106

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F   K   I      +SG ++ VQ  T+ +  + D F           +   
Sbjct: 107 KYQHIPARFAAKKGTEIKLDKEFMSGKTVAVQRATSMDTYITDNFP----NATIKRYGTA 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E     ++ R D    D +A+    L  +       +   ++           A+ + D
Sbjct: 163 DEAYLDLKSGRVDYVMADSAAISDGLLKKEGGDAFEFIGPKLTDPKWFGEGAGIAVRKAD 222

Query: 235 TEWYNIVSWTHYAM 248
            +     +    A+
Sbjct: 223 KDLKEKFNAAILAL 236


>gi|312973430|ref|ZP_07787602.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 1827-70]
 gi|310332025|gb|EFP99260.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 1827-70]
          Length = 260

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   T+ S+ A++         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +     R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLATGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|210623566|ref|ZP_03293892.1| hypothetical protein CLOHIR_01842 [Clostridium hiranonis DSM 13275]
 gi|210153436|gb|EEA84442.1| hypothetical protein CLOHIR_01842 [Clostridium hiranonis DSM 13275]
          Length = 279

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 96/287 (33%), Gaps = 28/287 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAE- 49
           M K   + +  ++ L   + S          + +  L  +K+ G L  GI      F   
Sbjct: 3   MKKLISLGMAMVLSLGLVACSGGEDKEASTSSTSDKLEQVKESGKLVVGIYPDYPPFEFH 62

Query: 50  --VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                + +  G D D   A++  +  +     +  +       AL++ +IDI+      T
Sbjct: 63  STANGSDEIAGVDKDLGEAIAKELGVEAE---FKEITFDGLIGALKADKIDIILSGMSPT 119

Query: 108 LLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
             R+    + F  + Y       +   ++  I SV +L    I VQ G+  E  +     
Sbjct: 120 PERDK--SVDFTDLYYTGKNIVAVKEGEEDKIKSVDELKNLKIAVQKGSIQEAYVT---- 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKS 224
                      E + ++    +    DA   + +             +    LP+  S+ 
Sbjct: 174 KLGCT-SIKSLEAIPDVMTELKNGNVDAVVVNDTVGILNMQEMGGLVQANLELPNGDSEE 232

Query: 225 PLAPAIIQGDTE--WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
            +A AI Q D    +   V+       + E     ++N +  +K+  
Sbjct: 233 GMAAAIKQDDNNKAFLEAVNKAVNNFKSNEFEKSLKENTDLATKENK 279


>gi|251791413|ref|YP_003006134.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247540034|gb|ACT08655.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 256

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L   +L  +  +     L  IK  G +K G       +    A+G   GFD
Sbjct: 1   MKKS-RLALLTGALLVTSVLAHAQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +        ++          + +K+ D +      T  R+      F  
Sbjct: 60  VDVGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKERQA--KYDFSN 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I S + L G     Q+ T+    LA  + A       +  +  
Sbjct: 115 PYIDAKSVLIVRSDNTSIKSFNDLKGHKSA-QSLTSNYSKLATSYGA-----EIVPTDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R +A   D  +    K          ++    S  P A  + +   +  +
Sbjct: 169 NQSLELVLSGRAEATLNDNLSFLDFKKHKPDAKV-KVVATAESGDPSAILVRKNQPQLVD 227

Query: 240 IVSWTH 245
            ++   
Sbjct: 228 ALNKAL 233


>gi|148989515|ref|ZP_01820874.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|168483981|ref|ZP_02708933.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC1873-00]
 gi|147925058|gb|EDK76139.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|172042731|gb|EDT50777.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC1873-00]
          Length = 271

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTNLESANIAAQKGTVPESMVKEQLPK----VQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|148985652|ref|ZP_01818806.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|147922133|gb|EDK73255.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|301800260|emb|CBW32880.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae OXC141]
          Length = 271

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTNLKSANIAAQKGTVPESMVKEQLPK----VQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|15901248|ref|NP_345852.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae TIGR4]
 gi|111658588|ref|ZP_01409245.1| hypothetical protein SpneT_02000263 [Streptococcus pneumoniae
           TIGR4]
 gi|14972882|gb|AAK75492.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae TIGR4]
          Length = 271

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPK----VQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVVQ 248


>gi|328885478|emb|CCA58717.1| glutamate binding periplasmic protein [Streptomyces venezuelae ATCC
           10712]
          Length = 273

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 70/212 (33%), Gaps = 6/212 (2%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  GI     G      +G + GFDVD  + ++  +     KI +    + ER   +++
Sbjct: 35  KITVGIKFDQPGLGLKTPDGTYAGFDVDVAKYVAKELGFAEDKINWKQAPSAERENLIKN 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAG 153
             +  +  +      R     + F    +   Q  ++      I+ V  L+   +C   G
Sbjct: 95  GDVKFVVASYSINEKR--LKEVDFAGPYFVTHQDLLVRADDSSITKVEDLNSKKLCSVTG 152

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   + +       K          E        R DA T D S L       +   +
Sbjct: 153 STSAQNVKEKLA---PKADLQQLGGYSECLTGLENKRVDALTTDASILAGYASQKEHQGK 209

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +    +S       I +GD+E    ++   
Sbjct: 210 FKLAGLSLSNENYGIGIKKGDSELKGKINKAL 241


>gi|238019430|ref|ZP_04599856.1| hypothetical protein VEIDISOL_01299 [Veillonella dispar ATCC 17748]
 gi|237864129|gb|EEP65419.1| hypothetical protein VEIDISOL_01299 [Veillonella dispar ATCC 17748]
          Length = 268

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 78/255 (30%), Gaps = 17/255 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61
           K   +    L++         +S          L  G N   V F         + GFD+
Sbjct: 7   KKLIIGGCMLVMAGTVIGGCGSSTQTT---SNKLIVGTNATFVPFEFKDEKTQDYTGFDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RA+   I  D   ++   +       AL +  ID+ +     T  R  S  + F   
Sbjct: 64  DLIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLFSSP 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y +    +      I+S+  L G  I  Q GTT                    F+   E
Sbjct: 119 YYENALAVVYKDGANITSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDHSNE 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNI 240
                +    DA   D+    A   +   P +H   +    +K  L  AI + + +    
Sbjct: 174 ALLELQNGGADATVIDLP--VAQFYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKDLQEQ 231

Query: 241 VSWTHYAMVTAEELG 255
           ++     M    E  
Sbjct: 232 INKAIADMKADGEFN 246


>gi|171316557|ref|ZP_02905773.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171098285|gb|EDT43091.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 266

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEV--LDFSQPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|307728987|ref|YP_003906211.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Burkholderia sp. CCGE1003]
 gi|307583522|gb|ADN56920.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1003]
          Length = 258

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L ++   + +         K+   ++ G++     F    A+G   GFD
Sbjct: 1   MKK--LALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAASGQVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL + +     K  ++  +      AL+ K+ D +  +   T  R     + F  
Sbjct: 50  VDLTKALCARM---NVKCVWVEQDFDGIIPALKGKKFDAIVSSLTVTDKR--REQIDFSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I       + +   L G  + V+ GTT E     Y++        + ++  
Sbjct: 105 KLFDAPARMIAKAGSPLLPTAESLKGKRVGVEQGTTQEAYAKAYWEPKG--VTVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234
           +++ A   + R DA   D     A  L   R        P++          A  + + D
Sbjct: 163 DQVYADLTSGRLDAALQDEIQADAGFLKTPRGKGFAWAGPEVKDAKTIGEGTAIGLRKED 222

Query: 235 TEWYNIVSWTH 245
           T+   + +   
Sbjct: 223 TDLKTMFNKAL 233


>gi|222094149|ref|YP_002528206.1| amino acid ABC transporter , amino acid-binding protein [Bacillus
           cereus Q1]
 gi|221238204|gb|ACM10914.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus Q1]
          Length = 264

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVELGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|170724142|ref|YP_001751830.1| cystine transporter subunit [Pseudomonas putida W619]
 gi|169762145|gb|ACA75461.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 264

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 80/246 (32%), Gaps = 13/246 (5%)

Query: 3   KDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K     S+  L+     S +     L  I+++G +  G+      F+    NG   GF+V
Sbjct: 6   KPLLNASLAILLGTGLFSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEV 65

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +F   L+  +       +  P        AL+SK++D++      +  R+     +    
Sbjct: 66  EFSELLAKELGVKA---KIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYT 122

Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   +  K  +  I +   L+G  + V  GT  E  +               +E  
Sbjct: 123 VSGIQALILKKKAEQLNIKTAQDLAGKKVGVGLGTNYEQWVKQDVP----NAEVRTYEDD 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               A  R  R DA   D  A            +  +  D  S+     A+ +G+ E   
Sbjct: 179 PSKFADLRNGRIDAILIDRLAALEYAQKAK---DTELAGDAFSRLESGVALRKGEPELLA 235

Query: 240 IVSWTH 245
            +    
Sbjct: 236 AIDKAI 241


>gi|161523531|ref|YP_001578543.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189351696|ref|YP_001947324.1| polar amino acid transporter substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221201670|ref|ZP_03574708.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD2M]
 gi|221207255|ref|ZP_03580265.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD2]
 gi|221213394|ref|ZP_03586369.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD1]
 gi|160340960|gb|ABX14046.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189335718|dbj|BAG44788.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221166846|gb|EED99317.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD1]
 gi|221172843|gb|EEE05280.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD2]
 gi|221178486|gb|EEE10895.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD2M]
          Length = 266

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|117621407|ref|YP_857215.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117562814|gb|ABK39762.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 257

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 76/246 (30%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++  + L   +     S L +I++ G +K G       F     +G   GFD
Sbjct: 1   MKKRHSLFLMAALPLALMTSVQAQSSLAEIQRAGVIKIGTEGAYPPFTYHDKSGKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++S +   P   Q++          + +K+ D++      T  R       F  
Sbjct: 61  VEIGELIASGLGVKP---QFVEGKWDGLIAGVDAKRYDLVLNEVAITPER--LKKYDFSD 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++H     I S + L G     Q+ T+    LA    A       +  E  
Sbjct: 116 PYITSKAVIVVHSDNHSIKSFADLKGKKSS-QSLTSNFAQLAKASGA-----EVVATEGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R DA   D  +    K         V   +          + +G  E   
Sbjct: 170 NQSLELVLTGRVDATLNDSLSFLDFKKQKPDAKLKVAATEAKGDQS-GALLAKGQPELLA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINQAL 234


>gi|325685933|gb|EGD27997.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 289

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77
             S   S     K+   +  G+      F       G  +GF++D   A++  I    SK
Sbjct: 33  CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 92

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
             + P+  K R   L +  +D +      T  R     + F  + +   +  I+ K   I
Sbjct: 93  AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 150

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S++ L+   + V A   T+  +A+       K     F+       A +A + D    D
Sbjct: 151 RSIADLNKKGVVVIAIKGTD--VANQVAKLAPKARVKQFDDYGSAFNALKAGQGDVMIDD 208

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              L  L        E  +    +++ P    + +G TE    ++    
Sbjct: 209 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINLALK 254


>gi|194433178|ref|ZP_03065460.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Shigella dysenteriae 1012]
 gi|194418675|gb|EDX34762.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Shigella dysenteriae 1012]
 gi|332088934|gb|EGI94046.1| glutamine-binding periplasmic protein [Shigella boydii 5216-82]
 gi|332091034|gb|EGI96124.1| glutamine-binding periplasmic protein [Shigella dysenteriae 155-74]
          Length = 248

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y      ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSDLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|196040156|ref|ZP_03107458.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus NVH0597-99]
 gi|229089485|ref|ZP_04220755.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-42]
 gi|196029011|gb|EDX67616.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus NVH0597-99]
 gi|228693871|gb|EEL47564.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-42]
          Length = 264

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVA------KHTNQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|320183306|gb|EFW58161.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Shigella flexneri CDC 796-83]
 gi|332097421|gb|EGJ02401.1| glutamine-binding periplasmic protein [Shigella boydii 3594-74]
          Length = 248

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L ++F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSVLKVSLAALTLVFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + D +       A  +G  E  +
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRD 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|317048576|ref|YP_004116224.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316950193|gb|ADU69668.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 266

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 86/248 (34%), Gaps = 15/248 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + ++   +       ++L  +K+RG L  G+      F+    NG   GF
Sbjct: 7   RRQLVMGVMAVALVAGFNVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQDENGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+F + L+  +          P        +L SK+ID++      +  R+      F 
Sbjct: 67  EVEFAQELAQHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFS 121

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   +  KK    I+    LSG  + V  G+  E  L D  K          ++
Sbjct: 122 TPYTISGVQALTLKKNAGSINKPEDLSGKKVGVGLGSNYEQWLRDNVK----GVDIRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R+ R DA   D   L AL L         +     S+     A+ +G+ + 
Sbjct: 178 DDPTKYQDLRSGRLDAILVDR--LAALDLVKKTGDTMAVAGPAFSRLESGVALRKGNDDL 235

Query: 238 YNIVSWTH 245
              +    
Sbjct: 236 LKAIDAAI 243


>gi|149002780|ref|ZP_01827706.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS69]
 gi|237651184|ref|ZP_04525436.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CCRI 1974]
 gi|237821264|ref|ZP_04597109.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|147759074|gb|EDK66068.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS69]
          Length = 271

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|42779548|ref|NP_976795.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|42735464|gb|AAS39403.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
          Length = 264

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVELGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKNDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|107024193|ref|YP_622520.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116688482|ref|YP_834105.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105894382|gb|ABF77547.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116646571|gb|ABK07212.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 266

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|324007275|gb|EGB76494.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 57-2]
          Length = 266

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L    + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTADDLKDKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|307149990|ref|YP_003885374.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
 gi|306980218|gb|ADN12099.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
          Length = 296

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 98/250 (39%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   ++++ L         + A   L  + + G L  G  T LV  A V    +  G+
Sbjct: 1   MIKTLTLALISLAFTLGVPLKSGAETVLERVARTGTLVVGTATDLVPLAYVNDKNELVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D+   L + +         +Q++ +   +    L S+++DI+  N  +T  R+    +
Sbjct: 61  SIDYLNFLKNQLQTQLGRDVTLQFVEVTPTDAIPKLISQEVDIIC-NAAFTWERDKF--V 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G   ++     + SV  L+G  I     +     +    K    K   +  
Sbjct: 118 DFSVSMGLGGTRLLVKGGSQLGSVDSLAGKRIAAIRNSIPAQVI----KVLQPKAIIVNV 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDT 235
           E ++E   + +  + D +      L   + T    + + ++P    ++  +A  + + ++
Sbjct: 174 ESMQEGFDSVKQGKVDGFAASGIVLDGYRQTVSDKNAYQVVPQKPYNREGIACMVPENNS 233

Query: 236 EWYNIVSWTH 245
           ++ ++V+++ 
Sbjct: 234 KFLDVVNFSV 243


>gi|227540882|ref|ZP_03970931.1| 3 family extracellular solute-binding protein [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227183142|gb|EEI64114.1| 3 family extracellular solute-binding protein [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 336

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 13/232 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            + ++ DI KRG++  G+       +    A G+  GF++D    ++  IF DPSK+ + 
Sbjct: 77  ASELIPDIYKRGYIIVGVEQSQNLMSYRDLATGELIGFEIDLAHEIARDIFGDPSKVAFR 136

Query: 82  PLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++A  R  AL    ++++D++ R    T  R  +  + F    +    GF+  K   ++
Sbjct: 137 YVDAANREQALSAPPTERVDVVIRAMTMTKGR--ADNVDFSAPYFSTSAGFLTDKDSPVT 194

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +V  L+ A++CV  G+  +  +A            I      +   A +  + DA   D 
Sbjct: 195 TVDDLNKATVCVAQGSINQYRVARIAP----GATLITTLSWSDCLMALQQQQVDAVFSDT 250

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + L  +   +   S  VI  +   +      I QG+      V+ T   ++ 
Sbjct: 251 ALLAGMAAQDAYTSMTVISKE---RDYYGIGIKQGNDNLTRQVNKTIERIIA 299


>gi|163747482|ref|ZP_02154833.1| putative ABC transporter periplasmic amino acid-binding protein
           [Oceanibulbus indolifex HEL-45]
 gi|161379238|gb|EDQ03656.1| putative ABC transporter periplasmic amino acid-binding protein
           [Oceanibulbus indolifex HEL-45]
          Length = 268

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 73/200 (36%), Gaps = 8/200 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F      L+       +  A  L DI   G L+C +                 GFD
Sbjct: 1   MK--FTQLAGSLVAATVIGSAAQADKLDDIISSGTLRCAVVLDFPPMGSRDDTNTPVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C  L++A+  D   ++       +R  AL S + D+   +T  TL R  ++G  F  
Sbjct: 59  VDYCNDLAAALGVDAEIVE---TPFPDRIPALVSGRADVGVASTSDTLERAKTVG--FSV 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  +  G+ S   L G ++   AGT   + L +   A +       ++   
Sbjct: 114 PYFAFTNVVLTREDAGVDSFESLKGKTVGSVAGTFEAIALEEQIDAWD-DGSFRSYQSQA 172

Query: 181 EIDAAYRAHRCDAYTGDISA 200
           ++  +    + DA     + 
Sbjct: 173 DVFLSLSQGQIDATVVTSTV 192


>gi|149007336|ref|ZP_01830994.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|149011634|ref|ZP_01832830.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|168493297|ref|ZP_02717440.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|307127037|ref|YP_003879068.1| glutamine ABC transporter glutamine-binding protein [Streptococcus
           pneumoniae 670-6B]
 gi|147761140|gb|EDK68108.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|147764065|gb|EDK70997.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|183576732|gb|EDT97260.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|306484099|gb|ADM90968.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae 670-6B]
 gi|332074716|gb|EGI85190.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA17545]
          Length = 271

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|301050725|ref|ZP_07197584.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 185-1]
 gi|300297593|gb|EFJ53978.1| bacterial extracellular solute-binding protein, family 3
           [Escherichia coli MS 185-1]
          Length = 266

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F     +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFNFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I +   L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|255326959|ref|ZP_05368035.1| glutamate binding protein [Rothia mucilaginosa ATCC 25296]
 gi|255296176|gb|EET75517.1| glutamate binding protein [Rothia mucilaginosa ATCC 25296]
          Length = 276

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 83/239 (34%), Gaps = 16/239 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
             +     S ++           ++ GI     G      N  + GFDV+  R ++  + 
Sbjct: 20  TGVLAGCSSADSD--------HKIRIGIKVDQPGLGYQDGN-TYTGFDVEVARYVAGKLG 70

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +I+++   A  R   L + Q+D++      +  R+ +  + F    Y  GQ  ++ 
Sbjct: 71  YSEEQIEFVESPAANRENMLNTGQVDMIFATYSISESRKKT--VDFAGPYYTAGQDLLVR 128

Query: 133 KKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                I     L+G ++C   G+T+   + D F  +    + +      +   A      
Sbjct: 129 ADNTDIKGPDDLNGKNLCSVTGSTSAQKVQDKFAKN---VNLVKQNSYSDCVVALNGGVV 185

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           DA T D   L  L  T     +  ++    +       + +G  +    V+     MV 
Sbjct: 186 DAVTTDDITLAGLAATKANKGKLKVVGSPFTTERYGVGLPKGTDKC-EAVNNAINEMVA 243


>gi|87122495|ref|ZP_01078375.1| putative amino acid ABC transporter, periplasmic protein
           [Marinomonas sp. MED121]
 gi|86162288|gb|EAQ63573.1| putative amino acid ABC transporter, periplasmic protein
           [Marinomonas sp. MED121]
          Length = 263

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 11/256 (4%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    VS   +II  F+ F+  A +L DI+ R  ++  +      F  +  +   +G 
Sbjct: 1   MKRFIKLVSKAMIIIAGFSVFNATADVLQDIQGRKLIRIAVPQDFPPFGSIGTDLKPQGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++  +      I+ +P+ +  R   LQ+K++D++  +      RE    + F 
Sbjct: 61  DVDMANYIADEMGVK---IEIVPVTSANRIPYLQTKKVDLVISSLGKNPEREK--AIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G    K   ++ +  L+G  + V  G+  +L L  +        +   FE  
Sbjct: 116 TPYAPFFLGVFGSKDVEVTKIEDLAGKIVGVTRGSVEDLELEKHAPK---SVNVRRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                AY + + +        L A ++   +P        ++  SP    + +G+     
Sbjct: 173 NTTLTAYLSGQVNLIATGN--LVATEIAKRQPQRAPESKFMLKDSPCYIGMAEGEVALQA 230

Query: 240 IVSWTHYAMVTAEELG 255
            V+      + + +L 
Sbjct: 231 KVNELINKALASGKLN 246


>gi|301026982|ref|ZP_07190370.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           196-1]
 gi|299879475|gb|EFI87686.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           196-1]
          Length = 248

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +   E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKDSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|323525229|ref|YP_004227382.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Burkholderia sp. CCGE1001]
 gi|323382231|gb|ADX54322.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1001]
          Length = 258

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L ++   + +         K+   ++ G++     F    A+G   GFD
Sbjct: 1   MKK--LALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAASGQVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL + +     K  ++  +      AL+ K+ D +  +   T  R     + F  
Sbjct: 50  VDLTRALCARM---NVKCVWVEQDFDGIIPALKGKKFDAIVSSLTVTDKR--REQIDFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I      +   +  L G  + V+ GTT E     Y++        + ++  
Sbjct: 105 KLFDAPARMIARTGSPLLPTADSLKGKRVGVEQGTTQEAYAKAYWEPKG--VTVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234
           +++ A   + R DA   D     A  L   R        P++          A  + + D
Sbjct: 163 DQVYADLTSGRLDAALQDEIQADAGFLKTPRGKGFAWAGPEVKDPKTIGEGTAIGLRKDD 222

Query: 235 TEWYNIVSWTH 245
            E   + +   
Sbjct: 223 AELKAMFNKAL 233


>gi|226360987|ref|YP_002778765.1| cystine ABC transporter cystine-binding protein [Rhodococcus opacus
           B4]
 gi|226239472|dbj|BAH49820.1| cystine ABC transporter cystine-binding protein [Rhodococcus opacus
           B4]
          Length = 262

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 81/237 (34%), Gaps = 16/237 (6%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +++L  + L     S +  ++  +++ G LK G       F+    +G   
Sbjct: 1   MRRTLPAALIAVLTALSLAGCGNSDSGPVIDQVRESGVLKVGTEGTYTPFSYQGPDGQLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVD  RA+   +      +++        F  L++K+ D+++        R  +    
Sbjct: 61  GYDVDVIRAVGDKLG---VSVEFTQTPWDSIFAGLEAKRYDLVANQVTVNDER--TQKYD 115

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                 +     +       I+S++ L+G +   Q+ T+    +A    A+         
Sbjct: 116 LSTPYTYSEGVIVTRADDNAITSLADLNGKTTA-QSATSNWAQVARDAGAN-----VESV 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           E   +     +  R DA   D     A        +   I  +    S  A A  + 
Sbjct: 170 EGFVQAITLLKDGRVDATVNDN-LAVAEYQKQTGDTGVKIAAETGDTSEQAFAARKD 225


>gi|224827117|ref|ZP_03700213.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224600626|gb|EEG06813.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 254

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 78/251 (31%), Gaps = 21/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   +    + +  A           ++ G++     F++  A+G  +GFD
Sbjct: 1   MKKVLMAVALAAPLF---ASAAQAET---------IRFGVDLNYPPFSKQGADGKPQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL SA+    +  + +P +      AL + + D +  +   T  R+    + F  
Sbjct: 49  IDMAHALCSAL---KATCEIVPQDWDGLIPALNTNKFDAILSSMQITDERKK--AVDFTN 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      I  K       +   G  I     +T E    DY+         + + +  
Sbjct: 104 KYYNIPSRII-AKVGTKVDQNSFKGKKIGALRASTQEKFAKDYWGKTG--AKIVAYTKSP 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239
           E      + R DA   D +      L   R      + P+                +  N
Sbjct: 161 ESFLDLTSGRLDAVFVDGAVGDQEFLKTPRGKGFAFVGPEYADAKYFGLGAGIAVKKGNN 220

Query: 240 IVSWTHYAMVT 250
            +     A + 
Sbjct: 221 ALRERLNAAIE 231


>gi|104782328|ref|YP_608826.1| arginine/ornithine ABC transporter periplasmic-binding protein
           [Pseudomonas entomophila L48]
 gi|95111315|emb|CAK16035.1| Arginine/ornithine ABC transporter, periplasmic binding protein
           [Pseudomonas entomophila L48]
          Length = 258

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 77/244 (31%), Gaps = 23/244 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L      + +            G L+ GI      F+     G+  GFD
Sbjct: 1   MNKTGLLGALALCACSALTQA----------DEGSLRIGIEAAYPPFSYRTPAGELAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL + +     K Q++         +L+ ++ID +  +   T   +    + F  
Sbjct: 51  YDIGNALCAQM---QVKCQWVIQEFDGMIPSLKVRKIDAVLSSMSITE--DRLKSVDFTD 105

Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F M     ++   + L G  + VQ  +T +    +  +        + +   
Sbjct: 106 KYYHTPGKFAMKAGSTLNDPVADLKGHKLGVQRASTYDRYATEQLEPAG--VEVVRYASQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            E      A R DA   DI       +         ++   +S           A+ +GD
Sbjct: 164 NEAFLDLVAGRLDATLADIVNTEESFIKTPAGQGFALVGPDVSDPQYFGRGAGIAVRKGD 223

Query: 235 TEWY 238
           +   
Sbjct: 224 SANL 227


>gi|295675752|ref|YP_003604276.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295435595|gb|ADG14765.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 302

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 83/231 (35%), Gaps = 11/231 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L F + + +A  L +I K G LK  +      F  V A+   +G+D+D    L+ A+   
Sbjct: 58  LAFHAGAAHADTLDNIAKTGVLKVAVPEDYPPFGSVGADMKPQGYDIDTAALLAKAM--- 114

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++ +P+N+  R   LQ+ ++D++  +   T  RE    + F        QG      
Sbjct: 115 NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKV--IDFSSAYAPYYQGVFGPAD 172

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +S  + L+G ++    G   E+ L               FE      AA+ + +    
Sbjct: 173 IKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNATIAAFLSGQVQLI 228

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   A+      P        +I  SP    + + +      V    
Sbjct: 229 AAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVDAAI 277


>gi|260581867|ref|ZP_05849663.1| CTP synthetase [Haemophilus influenzae NT127]
 gi|260095060|gb|EEW78952.1| CTP synthetase [Haemophilus influenzae NT127]
          Length = 257

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 61  VEVIRKVAEKLG---LKVEFKETRWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G         +         KA       +V + +
Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPAAFAFLQGEDALIT 228

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 229 KFNQVLEAL 237


>gi|148997552|ref|ZP_01825157.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|168575853|ref|ZP_02721768.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae MLV-016]
 gi|147756607|gb|EDK63648.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|183578334|gb|EDT98862.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae MLV-016]
          Length = 271

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|196045342|ref|ZP_03112574.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus 03BB108]
 gi|229182750|ref|ZP_04309990.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BGSC 6E1]
 gi|196023926|gb|EDX62601.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus 03BB108]
 gi|228600723|gb|EEK58303.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BGSC 6E1]
          Length = 264

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|182684353|ref|YP_001836100.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CGSP14]
 gi|303254549|ref|ZP_07340653.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS455]
 gi|303258989|ref|ZP_07344968.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|303261673|ref|ZP_07347620.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264342|ref|ZP_07350262.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS397]
 gi|303265859|ref|ZP_07351756.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS457]
 gi|303268192|ref|ZP_07353991.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS458]
 gi|182629687|gb|ACB90635.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CGSP14]
 gi|301802134|emb|CBW34871.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae INV200]
 gi|302598517|gb|EFL65559.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS455]
 gi|302637253|gb|EFL67741.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|302639932|gb|EFL70388.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|302642271|gb|EFL72619.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS458]
 gi|302644594|gb|EFL74844.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS457]
 gi|302646154|gb|EFL76381.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae BS397]
          Length = 271

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 80/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPK----VQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +  + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQTGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|15903294|ref|NP_358844.1| amino acid ABC transporter amino acid-binding protein
           [Streptococcus pneumoniae R6]
 gi|116516603|ref|YP_816693.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae D39]
 gi|15458890|gb|AAL00055.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae R6]
 gi|116077179|gb|ABJ54899.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae D39]
          Length = 271

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|313650137|gb|EFS14550.1| cystine-binding periplasmic protein [Shigella flexneri 2a str.
           2457T]
          Length = 266

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+ G L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKESGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|24112179|ref|NP_706689.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 2a
           str. 301]
 gi|30062295|ref|NP_836466.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 2a
           str. 2457T]
 gi|110804811|ref|YP_688331.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 5
           str. 8401]
 gi|24051019|gb|AAN42396.1| periplasmic glutamine-binding protein; permease [Shigella flexneri
           2a str. 301]
 gi|30040540|gb|AAP16272.1| periplasmic glutamine-binding protein; permease [Shigella flexneri
           2a str. 2457T]
 gi|110614359|gb|ABF03026.1| periplasmic glutamine-binding protein [Shigella flexneri 5 str.
           8401]
 gi|281600136|gb|ADA73120.1| Periplasmic glutamine-binding protein; permease [Shigella flexneri
           2002017]
 gi|313650288|gb|EFS14700.1| glutamine-binding periplasmic protein [Shigella flexneri 2a str.
           2457T]
          Length = 248

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|320450574|ref|YP_004202670.1| amino acid ABC transporter binding protein [Thermus scotoductus
           SA-01]
 gi|320150743|gb|ADW22121.1| amino acid ABC transporter, binding protein [Thermus scotoductus
           SA-01]
          Length = 254

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 11/224 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                L  IK+ G ++ G       F          GF++D   A++  +   P    ++
Sbjct: 18  AQVRTLDQIKRSGEIRIGTEGAFSPFNYFDEKNQLVGFEIDLGNAIAQKLGLKP---VWI 74

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                   + L   + D +  +   T  R     + F    ++   G I+ KK G  +  
Sbjct: 75  TQAFDSLLIQLNQGRFDFVIASHGITEERAK--AVDFTNP-HYCTGGIIVSKKGGPKTAK 131

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +L G  + VQ GTT                    +++  +      + R DA+  D    
Sbjct: 132 ELQGKVVGVQIGTTYMEAAQKIPGIK----QVRTYQKDPDALQDLLSGRLDAWITDRFV- 186

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +   +    + L +++ +  +A A+ +G+      ++   
Sbjct: 187 AKEAIKERKLENTLQLGELVFQERVAMAVAKGNKSVLQALNQAL 230


>gi|307329227|ref|ZP_07608392.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
 gi|306885126|gb|EFN16147.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
          Length = 303

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 10/235 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++S L   +KRG +  G              G   GFD++  + +++ +     KI +  
Sbjct: 53  DSSTLKAAQKRGKIVIGAKADQPFLGFQDTEGKRSGFDIEIAKMVAADLGFSADKITFKT 112

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSV 140
           +++  R  ++   Q+D           R+  +G  F    Y  G   ++  +    I+  
Sbjct: 113 VDSNVRETSISKGQVDYYVGTYTINDERKKQVG--FAGPYYQAGADLLVRMEDKGKITGP 170

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  +C   G+T    +                 +           + DA T D + 
Sbjct: 171 DSIKGKKVCSIVGSTPLQEIKKP----KYGAKTTELSKYSLCVKQLLDGQVDAVTTDDAI 226

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L        R ++  ++    ++ P    + + D    + +S +    +   +  
Sbjct: 227 LKGYAAQ--RSTKLHVVGKPFTEEPYGIGMNKNDKALRDAISDSLEEHIKNGDYK 279


>gi|227489293|ref|ZP_03919609.1| family 3 extracellular solute-binding protein [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227090753|gb|EEI26065.1| family 3 extracellular solute-binding protein [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 336

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 13/232 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            + ++ DI KRG++  G+       +    A G+  GF++D    ++  IF DPSK+ + 
Sbjct: 77  ASELIPDIYKRGYIIVGVEQSQNLMSYRDLATGELIGFEIDLAHEIARDIFGDPSKVAFR 136

Query: 82  PLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++A  R  AL    ++++D++ R    T  R  +  + F    +    GF+  K   ++
Sbjct: 137 YVDAANREQALSAPPTERVDVVIRAMTMTKGR--ADNVDFSAPYFSTSAGFLTDKDSPVT 194

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +V  L+ A++CV  G+  +  +A            I      +   A +  + DA   D 
Sbjct: 195 TVDDLNKATVCVAQGSINQYRVARIAP----GATLITTLSWSDCLMALQQQQVDAVFSDT 250

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + L  +   +   S  VI  +   +      I QG+      V+ T   ++ 
Sbjct: 251 ALLAGMAAQDAYTSMTVISEE---RDYYGIGIKQGNDNLTRQVNKTIERIIA 299


>gi|221234445|ref|YP_002516881.1| cystine transporter subunit [Caulobacter crescentus NA1000]
 gi|220963617|gb|ACL94973.1| cystine-binding protein [Caulobacter crescentus NA1000]
          Length = 269

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 78/228 (34%), Gaps = 14/228 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             AS    IK  G L+ G+      F     +G   GF+VDF +AL+  +        + 
Sbjct: 35  AGASGWDRIKASGKLRVGLEGTYPPFNFQDKSGQLAGFEVDFAKALAEQLGVKAE---FS 91

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P        +L+S +ID++      T  R+      F       G   I  K K   +  
Sbjct: 92  PAPFAGLLGSLESGRIDVVINQITITPDRQA--KYDFSEPYTVSGIQIIALKGKPAPTGP 149

Query: 142 Q-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G  + V  GT  E  L    +A+        ++         RA R DA   D   
Sbjct: 150 EGLTGKKVGVGLGTNYEQWL----RANVPTADVRTYDDDPTKYQDLRAGRIDAVLNDRLV 205

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 T+    E V      +      A+ + D     +++    A+
Sbjct: 206 AADFVKTSP---EFVASGQPFAAQGSGVAMQK-DPALKVVINQAINAL 249


>gi|153812542|ref|ZP_01965210.1| hypothetical protein RUMOBE_02941 [Ruminococcus obeum ATCC 29174]
 gi|149831467|gb|EDM86555.1| hypothetical protein RUMOBE_02941 [Ruminococcus obeum ATCC 29174]
          Length = 289

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 90/259 (34%), Gaps = 32/259 (12%)

Query: 1   MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     ++  ++     ++ S  A I         L  G +     +  +  NG++ G
Sbjct: 1   MKKKAVAVVMTAVMALGMVSAVSVQAGIEDK-----TLIVGFDAEYPPYGYMDENGEYTG 55

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++  +A+      +  K    P+N   + + L S  ID +          +      F
Sbjct: 56  FDLELAQAVCDLEGWELEK---KPINWDSKDMELNSGSIDCIWNGFTMNGRED---DYTF 109

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-----------ELTLADYFKAH 167
                 + Q  ++    GI  ++ L+G ++ VQA +             +  LAD F A 
Sbjct: 110 SEPYVDNSQVIVVADDSGIEKLTDLAGKTVGVQAASAALDLLQSEEEGGQKELADTFGAL 169

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           N       F          +A   DA   D     A    N R     IL + ++    A
Sbjct: 170 N------EFADYNTAFTELQAGALDALAID--VGVAKYQLNSRGEGFKILDETLNTEQYA 221

Query: 228 PAIIQGDTEWYNIVSWTHY 246
               +G+TE  +IV+    
Sbjct: 222 IGFKKGNTELCDIVNADLQ 240


>gi|54302807|ref|YP_132800.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Photobacterium profundum SS9]
 gi|46916231|emb|CAG23000.1| hypothetical amino acid ABC transporter, periplasmic amino
           acid-binding protein [Photobacterium profundum SS9]
          Length = 271

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 90/252 (35%), Gaps = 23/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V I+    LF T+ +              ++   +     F    A+G  KGFD
Sbjct: 14  MKKLMSVGIILASALFTTAQAA---------DEKVIRLASDFTYPPFNYKDASGTPKGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL +       K +++  N      AL S++ D +  +   T  R+    + F  
Sbjct: 65  IEIADALCAEA---KLKCEWVSQNWDGLIPALLSRKADAIMASMRITEDRKK--RVLFTD 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+  K  GI+  +  L G +I VQ GT  +  + D +           +   
Sbjct: 120 KYYQTPARFVTGKDSGITIDTAGLDGKTIGVQLGTIHDRYVTDIY---GDVAKIRRYTGQ 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E+     + R DA  G+   L    L  +R  +  +  + ++         A A+   D
Sbjct: 177 DEVYLDLVSGRLDAVFGNSDQLVLAFLEKERGKDFALAGEPVTDKAYIGEGTALALRLQD 236

Query: 235 TEWYNIVSWTHY 246
            +  +  +    
Sbjct: 237 KKLADKFNQAIK 248


>gi|256017882|ref|ZP_05431747.1| cystine transporter subunit [Shigella sp. D9]
          Length = 266

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     + + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNGA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|322832147|ref|YP_004212174.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rahnella sp. Y9602]
 gi|321167348|gb|ADW73047.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rahnella sp. Y9602]
          Length = 244

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L   +   T+                ++ G +     F  + A+    GFD
Sbjct: 1   MKKLILAALLSATVFTATAA-------------DTIRFGTSATYPPFESIGADNQIIGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +        +          AL+ ++ D++    D T  R  S  + F  
Sbjct: 48  IDLANALCKQM---QETCTFTNQPFDGLIPALKFRRFDVIISGMDITEER--SKQVTFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    +S++ L G  + ++ GTT +  L       + +   + ++  +
Sbjct: 103 PYYANTAMIIGPKG-KFASIADLKGKRVGLENGTTHQKYL----MEKHPEITTVGYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + L     +N    E   L        + +  A+   + E  
Sbjct: 158 NAILDLKSGRLDGLLGDTAVLNGWLKSNPNLGEVGELIKDPQYFGTGVGMAVRPDNKELL 217

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     +    E  
Sbjct: 218 AKLNTALEGIKANGEFK 234


>gi|222148524|ref|YP_002549481.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735510|gb|ACM36473.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 258

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 22/250 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F++   L  L   +    A           L  G       F  ++A+G   GFD+D  +
Sbjct: 7   FLAAASLTALSLFAGGAMAEE--------KLVIGTEGAYPPFNSLEADGSLTGFDIDIAK 58

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL   +        +   +      ALQ+K+ D +  +   T  R     + F    Y  
Sbjct: 59  ALCEEM---KVTCTFKTNDWDGIIPALQAKKFDAIVASMSITPER--LEKVDFSKKYYNT 113

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                + K     SV  L G +I  Q  T+     A+Y + H       ++   +E    
Sbjct: 114 PPAIAVPKDSPAKSVEDLKGKTIGAQTSTSH----ANYAEKHMPDSQLKLYPTADEYKLD 169

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIISKSPLAPAIIQGDTEWYNIV 241
               R DA   D+  L     ++      ++ P     +I+      A+ +G+T   +  
Sbjct: 170 ITNGRIDAVIDDVVVLTQWIKSDAGTCCKILTPLPIDPVINGEGAGIAVRKGETALADRF 229

Query: 242 SWTHYAMVTA 251
           +    A++ A
Sbjct: 230 TKAI-AVIRA 238


>gi|218548332|ref|YP_002382123.1| glutamine ABC transporter periplasmic protein [Escherichia
           fergusonii ATCC 35469]
 gi|218355873|emb|CAQ88488.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Escherichia fergusonii ATCC 35469]
 gi|324112750|gb|EGC06726.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
          Length = 248

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 84/245 (34%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVFKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|167837541|ref|ZP_02464424.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis MSMB43]
          Length = 266

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 81/250 (32%), Gaps = 16/250 (6%)

Query: 1   MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   K  F S L   +L   T+ +  A +L ++++ G LK  +      F     +G  +
Sbjct: 1   MKAFKPMFTSTLVAALLGIATASAHAADLLDNVRQAGVLKIALEGTYPPFDYRNGDGQLE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  + +++ +   P   Q++          LQ+ + D++      T  R+    L 
Sbjct: 61  GFDVDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARK--QALD 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F     +     I          +   L G  I V  GT      AD  K          
Sbjct: 116 FSQPYVYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGT----NFADLAKTLQ-GVDVKT 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E      A R D    D   L  L      P           ++ +     +G+ 
Sbjct: 171 YPGAPEKLRDVAAGRIDVSMDDRLMLPYLIKNAHMPLR-PGATIKGGETQMGIPFRKGNP 229

Query: 236 EWYNIVSWTH 245
           ++   +    
Sbjct: 230 KFAKAIDDAL 239


>gi|158423551|ref|YP_001524843.1| putative amino acid ABC transporter periplasmic amino acid-binding
           protein [Azorhizobium caulinodans ORS 571]
 gi|158330440|dbj|BAF87925.1| putative amino acid ABC transporter periplasmic amino acid-binding
           protein [Azorhizobium caulinodans ORS 571]
          Length = 307

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 82/249 (32%), Gaps = 8/249 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      + +  +         S +  I++ G +  G     V FA +  N    G+ V+
Sbjct: 8   KALAGIAVAVSWVALAGPVLADSRVDAIRQTGTITLGHPETSVPFAYLDGNQKPVGYTVE 67

Query: 63  FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  ++    SA+      I+Y P  +  R   L +  ID+   NT   + R   +   F
Sbjct: 68  ICEKIAGEIKSALNLPKLDIRYNPTTSATRIPLLANGTIDLECGNTTNNVERHKLVA--F 125

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            P T+      +  K     +++ +   G +I  QAG  T   ++      N        
Sbjct: 126 APTTFVAQVVLMARKDGGVDVNNPASFRGKTIAAQAGGQTFKVISQINAKGNYGITVAGA 185

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E        R      D    Y    ++  P   +I    +  +P      + D E
Sbjct: 186 KDTGEAFLMVETGRAAGTANDDGLAYGQVASSKTPDAFIIGTKSLEIAPYGIMEPKDDPE 245

Query: 237 WYNIVSWTH 245
           +  +V    
Sbjct: 246 FKKLVDDAV 254


>gi|294791037|ref|ZP_06756195.1| glutamate-binding protein [Scardovia inopinata F0304]
 gi|294458934|gb|EFG27287.1| glutamate-binding protein [Scardovia inopinata F0304]
          Length = 291

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 91/258 (35%), Gaps = 17/258 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +  +  ++    S S   S      + G  ++ GI     G      NG + GFDVD  R
Sbjct: 24  ILAVIAVLASVASVSACGST-----QSGHVIRIGIKFDQPGVGYK-KNGTYSGFDVDVAR 77

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     +I++    +K+R   LQ+  +D++  +   T  R+ +  ++F       
Sbjct: 78  YIAHKLGYKDYEIEWTEAPSKQRETMLQNGDVDMILASYSITDDRKKT--VSFAGPYLVA 135

Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           GQ  ++ K    I     L+G  +C   G+T+   +      ++ K   +      E   
Sbjct: 136 GQDLLIRKSNTSIKGPDDLNGKRLCSVTGSTSATVVKQ---KYSNKVQLMEQPSYAECAT 192

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVS 242
           A  +   DA T D   L  L   +       ++    ++      I +      +   ++
Sbjct: 193 ALFSGIVDAVTTDDIILAGLASNSRGK--LKLVGHPFTQEYYGVGIQKNKKTKAFAKKIN 250

Query: 243 WTHYAMVTAEELGITQKN 260
                M+          N
Sbjct: 251 AAIKDMIKTGAWKRAIWN 268


>gi|172039490|ref|YP_001805991.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece
           sp. ATCC 51142]
 gi|171700944|gb|ACB53925.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece
           sp. ATCC 51142]
          Length = 260

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 85/245 (34%), Gaps = 12/245 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +     ++  +I    + +  A+ L +IK+RG L   +   +        N   +G ++D
Sbjct: 7   RKLVSMLIIGVIFNLGNSNLIAATLEEIKQRGKLIVAVKDNVRPLGFRNQNNQLQGLEID 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + L+  I  DP  I   P+  +ER   +   ++D+          R     + F P  
Sbjct: 67  LAKQLAQDILGDPQAIILQPVQNQERLQKVIDGEVDLAIARITINSSRGRL--VNFSPYY 124

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y DG G I +    I +V  LS   I +   ++T   +             I     +E 
Sbjct: 125 YLDGTGIITNNP-RIRAVDHLSQGKIALLKRSSTIAVIRAELPQA----ELIGVNSYQEA 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNI 240
                  + DA+  D S L           ++  LP  +S   L   + +        + 
Sbjct: 180 LTLLETEQVDAFAADNSVLAGWVQAYP---QYYQLPVRLSGEGLGVVMPKGLQYASLRSR 236

Query: 241 VSWTH 245
           V+   
Sbjct: 237 VNEAI 241


>gi|299536213|ref|ZP_07049526.1| histidine-binding protein precursor (Hbp) [Lysinibacillus
           fusiformis ZC1]
 gi|298728199|gb|EFI68761.1| histidine-binding protein precursor (Hbp) [Lysinibacillus
           fusiformis ZC1]
          Length = 265

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 16/255 (6%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKK-------RGFLKCGINTGLVGFAEVK 51
           M K     + I+  + L      T                 +   K G       F  V 
Sbjct: 1   MKKTGWMLLMIIAALTLALAGCGTKDDASSGSSSSEDGGDGKKVYKVGTEATFAPFESVD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   G DVD  +A++  +     ++++  +  +  F  +++ + DI +     T  R+
Sbjct: 61  DSGKIVGIDVDILQAIADEM---DFEVEWNNIGWEPVFQTIKNGETDIGASGITITEERK 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F    Y      ++ +   I S+ +L    + VQ   T  +             
Sbjct: 118 E--SFDFTEPYYESQLLIVVKEDSKIKSLDELKDKKVSVQINATGHMAAKKLQGEA--ST 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + + FE              DA  GD + +Y     +      VI  D   K      + 
Sbjct: 174 NIMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQKLKVIEDDAFEKEYYGFMVQ 233

Query: 232 QGDTEWYNIVSWTHY 246
           +G+ E  + ++    
Sbjct: 234 KGNKELLDKLNEGLK 248


>gi|169795312|ref|YP_001713105.1| lysine/arginine/ornithine/histidine ABC transporter periplasmic
           substrate-binding protein [Acinetobacter baumannii AYE]
 gi|184158821|ref|YP_001847160.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii ACICU]
 gi|213158701|ref|YP_002319999.1| histidine-binding periplasmic protein [Acinetobacter baumannii
           AB0057]
 gi|215482845|ref|YP_002325048.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter baumannii AB307-0294]
 gi|294838850|ref|ZP_06783533.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter sp. 6013113]
 gi|294843462|ref|ZP_06788145.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter sp. 6014059]
 gi|294858196|ref|ZP_06795965.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter sp. 6013150]
 gi|301347432|ref|ZP_07228173.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter baumannii AB056]
 gi|301512550|ref|ZP_07237787.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter baumannii AB058]
 gi|301595884|ref|ZP_07240892.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter baumannii AB059]
 gi|169148239|emb|CAM86102.1| Lysine-arginine-ornithine-histidine-binding periplasmic protein
           precursor (ABC superfamily, peri_bind) [Acinetobacter
           baumannii AYE]
 gi|183210415|gb|ACC57813.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Acinetobacter baumannii
           ACICU]
 gi|213057861|gb|ACJ42763.1| histidine-binding periplasmic protein [Acinetobacter baumannii
           AB0057]
 gi|213987355|gb|ACJ57654.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter baumannii AB307-0294]
 gi|322507366|gb|ADX02820.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii 1656-2]
 gi|323518736|gb|ADX93117.1| amino acid ABC transporter periplasmic protein [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 261

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 5   MKKIFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R     + F  
Sbjct: 56  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    + + + L G  + VQ GT  E     Y+    +    + +   
Sbjct: 111 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +          +          A  + + D
Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDVKTLGVGAAIGLRKED 228

Query: 235 TEWYNIVSWTHYAMVT 250
            +    +     A++ 
Sbjct: 229 ADLKANIDKALAAIIA 244


>gi|186686345|ref|YP_001869541.1| polar amino acid ABC transporter inner membrane subunit [Nostoc
           punctiforme PCC 73102]
 gi|186468797|gb|ACC84598.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc
           punctiforme PCC 73102]
          Length = 496

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 81/235 (34%), Gaps = 13/235 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANG-- 54
           M K   + ++IL + ++  +  + +++ L  +   G   L    +     +      G  
Sbjct: 1   MKKKKAWLLTILVVAVVGISIITGHSNSLKAVSSLGKDTLTMITSPDYPPYEFYDTKGGD 60

Query: 55  -DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GFD+D  + L+  +     K+Q +  +      ALQ+ + D +      T  R+  
Sbjct: 61  RQIVGFDIDIAKTLAEKLG---FKLQIMESDFNGLIPALQANRADFVMAGMTPTPERQK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  I Y      +  K   +     L G  + VQ GT  E   A            
Sbjct: 117 -NIDFSIIYYEAKDTIVAPKGSNLKQPQDLLGKKLGVQLGTIQEQN-ARKISQKVAGIQL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
               +V E+    ++ R DA   + +        N     + I  +  S S +A 
Sbjct: 175 KQLNKVPEVVQEIKSGRIDAAIVEDTVAKGFAQANPDLEFNTIPSEEASGSAIAF 229


>gi|294853535|ref|ZP_06794207.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|294819190|gb|EFG36190.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
          Length = 291

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 78/264 (29%), Gaps = 13/264 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++ + +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATVGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263
            ++     +          +NI+ 
Sbjct: 229 AINKALDEIKADGTYNKISQNISA 252


>gi|289771597|ref|ZP_06530975.1| sugar-binding protein [Streptomyces lividans TK24]
 gi|289701796|gb|EFD69225.1| sugar-binding protein [Streptomyces lividans TK24]
          Length = 352

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%)

Query: 16  FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67
                  +   +  I+ R      L  G++     +     N     + +GFD+D    +
Sbjct: 76  TLAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRI 135

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  D   +Q+  +   +R  A+Q  ++D++ R        +    +AF    +  GQ
Sbjct: 136 AKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQ 193

Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183
             +  K   I+     L+G  IC  AG+T   TL    K   +              +  
Sbjct: 194 QVLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCL 253

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +   +    +       +  D  +      A+ +   +    V+ 
Sbjct: 254 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGDAFTTEYYGVAMKKDADDLVRRVNR 310

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
                  A+     Q +  +   +T +   +  
Sbjct: 311 VLEQW-RADRADGWQHSYEEWLSETMDDPAKSL 342


>gi|283785665|ref|YP_003365530.1| cystine-binding periplasmic protein [Citrobacter rodentium ICC168]
 gi|282949119|emb|CBG88726.1| cystine-binding periplasmic protein [Citrobacter rodentium ICC168]
          Length = 266

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMSVMAVALVAGMSAKTFADEGLLKKVKDRGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L    + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIETAADLKDKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  +  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQEAGVAVR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDAAI 243


>gi|171779325|ref|ZP_02920289.1| hypothetical protein STRINF_01170 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281942|gb|EDT47373.1| hypothetical protein STRINF_01170 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 280

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 15/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            K    ++  +  +   +  +++S            +K G +  G +   V       +G
Sbjct: 4   KKVLLSAMALVATVSLAACGSSSSKKVAKTDRWKTYQKDGKITIGFDNTFVPMGYEDEDG 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   A+         K+++  +N   +   L +  ID++      +  R    
Sbjct: 64  KNVGFDIDLANAVFEQYG---IKVKWQSINWDMKETELNNGTIDLIWNGYSISDERAE-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171
            + F      + Q  +  K  GI+S + +    +  Q+G++         K         
Sbjct: 119 KVLFTNPYMVNEQVLVTKKSSGITSFAGMKDKVLGAQSGSSGYDAFNAKPKVLKDIVSGG 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   +     + +R D    D                + I+         A    
Sbjct: 179 DATQYETFTQALVDLKNNRIDGLLIDKVYANYYLEQEGELDNYNIIASEFDGEDFAVGAR 238

Query: 232 QGDTEWYNIVSWTHY 246
           + D      ++    
Sbjct: 239 KADKTLVKKINQAFQ 253


>gi|320547041|ref|ZP_08041340.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, amino acid-binding protein [Streptococcus
           equinus ATCC 9812]
 gi|320448326|gb|EFW89070.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, amino acid-binding protein [Streptococcus
           equinus ATCC 9812]
          Length = 298

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 20/267 (7%)

Query: 1   MY-KDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M  K F +  L L+    L     S+N ++   I K+G L   I+     F         
Sbjct: 28  MKVKKFILGALALVSVCSLAACGSSSNENLQDKIDKKGKLVVAISPDYAPFEFKALIDGK 87

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G DV+  +A++  +     K++   ++      +LQ+ + D+       T  R   
Sbjct: 88  DTIVGADVELAKAIADEL---DVKLELSSMSFDNVLSSLQTGKADMAISGLSATKER--K 142

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      ++        +S+  LSG  + VQ GT  E    +  K      
Sbjct: 143 NAYDFSDAYYETENAVLVKASDLDKYNSIDSLSGLKVAVQKGTIEEGLAKEQLK----DS 198

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I    + E     ++ +  A   +          N   +              A A+ 
Sbjct: 199 KIISLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALANFALKTSDGDAKAVAMP 258

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQ 258
           +G  +    V+        A+E    Q
Sbjct: 259 KGSGKLVKTVNKVIK--KLAKEDKYKQ 283


>gi|115350421|ref|YP_772260.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|170698931|ref|ZP_02889991.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|172059445|ref|YP_001807097.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|115280409|gb|ABI85926.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|170136184|gb|EDT04452.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|171991962|gb|ACB62881.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 266

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEV--LDFSQPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|319945077|ref|ZP_08019339.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
 gi|319741647|gb|EFV94072.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
          Length = 270

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 13/228 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                  L  +++RG L+ GI      F      G + GF++D   AL+  +       Q
Sbjct: 29  AHAADDALNAVQQRGTLRIGIEGTYPPFNYQDEKGQFVGFEIDLGNALAETLGVKA---Q 85

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGI 137
           + P        AL S +ID++      T  R+      F       G   +   K    +
Sbjct: 86  FQPTKWDGLLAALDSGRIDVIINQVTITDARQK--KYRFSQPYTVSGIQAVTRTKDADTL 143

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S + L+G  + V  GT+ E        +         +E     +      R DA   D
Sbjct: 144 QSPNALAGKKVGVGLGTSYEEWARRTVPSA----EVRTYEDDPTKNQDLAVGRLDAVLVD 199

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              L AL       +   +     S+        + D   +  +    
Sbjct: 200 R--LAALYQVKQSKNRFALGGPAFSRQTSGIPTRKSDESLHQAIDQAL 245


>gi|304395377|ref|ZP_07377260.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304356671|gb|EFM21035.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 261

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 10/227 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + S  A  L DI+KRG ++  +      F  V  +   +G+D+D  + L+  +     K+
Sbjct: 18  AGSALADQLQDIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYDIDTAKYLAKQM---KLKL 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           Q +P+++  R   LQ+ ++D++  +      RE    + F         G    K   I 
Sbjct: 75  QLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFTRAYAPFFLGVFGPKGDEIK 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + S LSG SI V  G   ++ L+D             +E      +AY + +        
Sbjct: 133 AASALSGKSIGVTRGAVEDMVLSDVAPK---DAQIKRYEDNNTTLSAYLSGQVQYVATGN 189

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + A+      P++  +   ++  SP    + + +      V+   
Sbjct: 190 LVVAAIARQ--NPAKAPVAQFMLKDSPCFIGLKKDEPALKAKVNALI 234


>gi|225860826|ref|YP_002742335.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229503|ref|ZP_06963184.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254195|ref|ZP_06977781.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502655|ref|YP_003724595.1| amino acid ABC superfamily transporter ATP-binding protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|225727378|gb|ACO23229.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238250|gb|ADI69381.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301794435|emb|CBW36869.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae INV104]
 gi|327389580|gb|EGE87925.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA04375]
          Length = 271

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++ L ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEILSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|119383821|ref|YP_914877.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119373588|gb|ABL69181.1| L-glutamate-binding protein / L-aspartate-binding protein
           [Paracoccus denitrificans PD1222]
          Length = 295

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 6/232 (2%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS---SAIFDDPSKIQYLP 82
            L  I     +  G     + F+ + A+    GF +D C  +     A      ++ Y+P
Sbjct: 28  TLERIASNEAITIGYREASIPFSYLGADQQPIGFSLDLCARIVDSIEAKLGKEIRVNYVP 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +N+  R   +Q+  +DI    T     R     ++F   T+     +++  +  +     
Sbjct: 88  VNSSNRIPLIQNGTVDIECGGTANNKTR--QEQVSFSVATFVSQPRWLVLARNDLKGADD 145

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G ++ V    +  +  A    A  M  +    +   E      + R  A+  D   L 
Sbjct: 146 LKGKTV-VATQGSNAVGFAQALSAQGMDLNIAQAKDHAESFLMLTSGRAVAFMEDDILLA 204

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            L+     P+    LP+   +        + D E+  +V  T   ++ + E 
Sbjct: 205 GLRAAAPDPAALAFLPEAYDRIYYGLMFTKDDAEFKAVVDDTLKGLMASGEF 256


>gi|289705232|ref|ZP_06501631.1| bacterial extracellular solute-binding protein, family 3
           [Micrococcus luteus SK58]
 gi|289557982|gb|EFD51274.1| bacterial extracellular solute-binding protein, family 3
           [Micrococcus luteus SK58]
          Length = 297

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 7/221 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ GI     G    + +    GFD D  R ++  +      I+++   +  R  AL++ 
Sbjct: 53  LRIGIKFDQPGLGYREGSAQPTGFDTDVARYVADKLGVAEKDIEWVQTPSANRENALENG 112

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
           ++D++      T  R+    + F    +  GQ  ++      I+    L G ++C   G+
Sbjct: 113 EVDMIFATYSITDARKE--RVDFAGPYFVAGQDLLVRADDTAITGPESLDGKNLCSVTGS 170

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T+   + D F +     + +      E      + + DA T D   L  L   +    + 
Sbjct: 171 TSAQKIKDQFAS---GVNLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAAADANKGKF 227

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            ++ +  +       + +      +I +     M  + E  
Sbjct: 228 KVVGNTFTTERYGVGLPKDSERCEDI-NGAIKEMKDSGEWK 267


>gi|237731966|ref|ZP_04562447.1| cystine transporter subunit [Citrobacter sp. 30_2]
 gi|226907505|gb|EEH93423.1| cystine transporter subunit [Citrobacter sp. 30_2]
          Length = 273

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 8   MKLALLGRQALMGVMAVALVAGMSVKTYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 67

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 68  GKLTGFEVEFAEELAKHLGVKA---NLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 124 -KYDFSTPYTVSGIQALVKKGNEGVIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  +  S+     A+ 
Sbjct: 179 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQESGVALR 236

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 237 KGNEDLLKAVDAAI 250


>gi|171316136|ref|ZP_02905361.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171098740|gb|EDT43534.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 268

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + +  +++   ++  F +    A  L  I K G L+  +      F  V A+   +G+D
Sbjct: 10  RRAWLAALIAAPVMALFVAAPARADALDTIAKSGALRVAVPEDYPPFGSVGADMQPQGYD 69

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+ ++      ++ +P+N+  R   L + ++D++  +   T  RE    + F  
Sbjct: 70  IDMAELLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--VDFST 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 QG        +S+ + L+G ++    G   E+ L+              FE   
Sbjct: 125 AYAPYYQGVFGPADVKVSTPADLNGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P     +  +I  SP    + + +      
Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEARLLAK 238

Query: 241 VSWTH 245
           +    
Sbjct: 239 IDDAI 243


>gi|270262369|ref|ZP_06190641.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13]
 gi|270044245|gb|EFA17337.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13]
          Length = 263

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 16/255 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    S       ++L  +K+RG L  G+      F+    +G+  GF
Sbjct: 7   RRQLLLGVMTVALTAGLSAQTYAADNLLQQVKQRGTLIVGLEGTYPPFSFQGEDGNLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VDF  AL+  I       +  P        +L+SK+ID++      +  R+      F 
Sbjct: 67  EVDFANALAQHIGVKA---KLNPTKWDGMLASLESKRIDVVINQVTISDERKK--KYDFS 121

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G   ++ K     I+    L G  + V  GT  E  L    + +        ++
Sbjct: 122 TPYTVSGIQALVKKGNEGTIAKPEDLKGKKVGVGLGTNYEQWL----RENVQGVDVRTYD 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236
                    R  R +A   D   L AL L         +     S+     A+ +     
Sbjct: 178 DDPTKYQDLRIGRINAILVDR--LAALDLVKKTGDTLAVAGPAFSRQESGVAVRKTTRNC 235

Query: 237 WYNIVSWTHYAMVTA 251
           W  +         TA
Sbjct: 236 WQRLTRRLPRCKKTA 250


>gi|90411331|ref|ZP_01219343.1| hypothetical amino acid ABC transporter, periplasmic amino
           acid-binding protein [Photobacterium profundum 3TCK]
 gi|90327860|gb|EAS44191.1| hypothetical amino acid ABC transporter, periplasmic amino
           acid-binding protein [Photobacterium profundum 3TCK]
          Length = 258

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 88/252 (34%), Gaps = 23/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V I+    LF T+ +              ++   +     F    A+G  KGFD
Sbjct: 1   MKKLMSVGIILASALFTTAQAA---------DEKVVRLASDFTYPPFNYKDASGTPKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL         K +++  N      AL S++ D +  +   T  R+    + F  
Sbjct: 52  IEIADALCVEA---KLKCEWVSQNWDGLIPALLSRKADAIMASMRITEERKK--RVLFTD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+  K  GI+  +  L G +I VQ GT  +  + D +           +   
Sbjct: 107 KYYQTPARFVTGKDSGITIDTAGLDGKTIGVQLGTIHDRYVTDIY---GDVAKIRRYTGQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E+     + R DA  G+   L    L  +R     +  + ++         A A+   D
Sbjct: 164 DEVYLDLESGRLDAVFGNSDQLVLAFLEKERGKNFELAGEPVTDKAYIGEGTALALRLQD 223

Query: 235 TEWYNIVSWTHY 246
            +  +  +    
Sbjct: 224 KKLADKFNQAIK 235


>gi|86358031|ref|YP_469923.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86282133|gb|ABC91196.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 257

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 23/261 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F  + +  + LF  S   +               G ++    F  V A+G  +GFD+D
Sbjct: 6   RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL + +    ++  ++  +      AL +K+ D++  +   T  R     + F    
Sbjct: 57  IAKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y       + K   I+ V+ L G  I  Q  TT       +           ++   +E 
Sbjct: 112 YNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238
                + R DA   D+  L     ++      ++    + K         AI +GD    
Sbjct: 168 KLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226

Query: 239 NIVSWTHYAMVTAEELGITQK 259
             ++    A+  + E    Q 
Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247


>gi|83647880|ref|YP_436315.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis
           KCTC 2396]
 gi|83635923|gb|ABC31890.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Hahella chejuensis KCTC
           2396]
          Length = 258

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 27/254 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L      +           K    ++ G++     FA   A G+ +GFD
Sbjct: 1   MKKLLITLVSVLAFSSAQA-----------KDWKEIRIGVDATYPPFASKNAAGELEGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL + +    +K +++  +      AL +++ D +  +   T  R     + F  
Sbjct: 50  IEIGNALCAEM---KAKCEWVVQDWDGIIPALLARKYDAILSSMSITEER--REKVLFSD 104

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G++  K  GI    ++QL G S+ VQ GT  +  +++         +   +  
Sbjct: 105 KYYNTPSGWVAKKGAGIDPSDMNQLKGKSVGVQRGTIQDTYVSE---ELKDIVNIKRYAG 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL------PDIISKSPLAPAIIQ 232
            +E     +A R D    D  A     L  +   +          P  I       A+ +
Sbjct: 162 QDEAYLDMKAGRLDLLFVDALAADGGFLKKEAGQDFEFAGPMITEPVRIFGEGAGIAVRK 221

Query: 233 GDTEWYNIVSWTHY 246
            DT+  N  +    
Sbjct: 222 RDTDLANKFNAAIK 235


>gi|77413248|ref|ZP_00789445.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 515]
 gi|77160708|gb|EAO71822.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 515]
          Length = 301

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55
                  I  L ++  ++   +   +  I      +K   +  G +   V       +GD
Sbjct: 29  KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 88

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          +++ P+N   +   L +  ID++      T  R     
Sbjct: 89  YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTTERAK--K 143

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           +AF      + Q  +      I+S+  + G  +  Q+G++         D  K       
Sbjct: 144 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 203

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + ++   +     + +R D    D                +  +              +
Sbjct: 204 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 263

Query: 233 GDTEWYNIVSWTHY 246
            D      ++    
Sbjct: 264 VDRRLIEKINKAFK 277


>gi|308187619|ref|YP_003931750.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Pantoea vagans C9-1]
 gi|308058129|gb|ADO10301.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Pantoea vagans C9-1]
          Length = 260

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 78/250 (31%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    S              G ++ G +     F    A G   GFD
Sbjct: 1   MKKRVLALSLMLGLTSAASVFAAVQ--------GSIRIGTDPTYPPFESKDAQGQLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I    ++  Y+  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLANEICKRI---HTQCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSE 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   I  ++  L G +I +  GTT E      ++   +   P  +   
Sbjct: 108 KLYAANARLVAPKGSKIQPTIESLKGKNIGLLQGTTQETYANQNWRPKGVNVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D        L       +      +    +        + + D
Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPSVKDDKIFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWT 244
           +E    +   
Sbjct: 226 SELKAAIDKA 235


>gi|16759797|ref|NP_455414.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764248|ref|NP_459863.1| arginine transport system component [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142430|ref|NP_805772.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414023|ref|YP_151098.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179449|ref|YP_215866.1| arginine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161614848|ref|YP_001588813.1| hypothetical protein SPAB_02601 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167550405|ref|ZP_02344162.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|167992140|ref|ZP_02573238.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168230794|ref|ZP_02655852.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168236832|ref|ZP_02661890.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168240768|ref|ZP_02665700.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168263593|ref|ZP_02685566.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168466505|ref|ZP_02700367.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168819949|ref|ZP_02831949.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194446347|ref|YP_002040125.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194450634|ref|YP_002044917.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194468477|ref|ZP_03074461.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194737012|ref|YP_002113980.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250634|ref|YP_002145840.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197263320|ref|ZP_03163394.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197362946|ref|YP_002142583.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243138|ref|YP_002214851.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200391119|ref|ZP_03217730.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204929898|ref|ZP_03220919.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|207856319|ref|YP_002242970.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213052503|ref|ZP_03345381.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213417552|ref|ZP_03350694.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213428042|ref|ZP_03360792.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213580630|ref|ZP_03362456.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
 gi|213647861|ref|ZP_03377914.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|224582737|ref|YP_002636535.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238913404|ref|ZP_04657241.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|289825018|ref|ZP_06544381.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25296352|pir||AD0607 arginine-binding periplasmic protein 2 precursor [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16419395|gb|AAL19822.1| arginine 3rd transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502090|emb|CAD05326.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138060|gb|AAO69621.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56128280|gb|AAV77786.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62127082|gb|AAX64785.1| ABC superfamily (bind_prot), arginine 3rd transport system
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364212|gb|ABX67980.1| hypothetical protein SPAB_02601 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405010|gb|ACF65232.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194408938|gb|ACF69157.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194454841|gb|EDX43680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194712514|gb|ACF91735.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631092|gb|EDX49678.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197094423|emb|CAR59939.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197214337|gb|ACH51734.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197241575|gb|EDY24195.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197290083|gb|EDY29440.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197937654|gb|ACH74987.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199603564|gb|EDZ02110.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204320892|gb|EDZ06093.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205324560|gb|EDZ12399.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205329626|gb|EDZ16390.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334795|gb|EDZ21559.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205340189|gb|EDZ26953.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205343014|gb|EDZ29778.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205347767|gb|EDZ34398.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206708122|emb|CAR32415.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467264|gb|ACN45094.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261246142|emb|CBG23945.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992649|gb|ACY87534.1| arginine transport system component [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157469|emb|CBW16959.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911914|dbj|BAJ35888.1| arginine ABC transporter substrate binding protein ArtJ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320085161|emb|CBY94948.1| Arginine-binding periplasmic protein 1 Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321223248|gb|EFX48317.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322713918|gb|EFZ05489.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323129191|gb|ADX16621.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622604|gb|EGE28949.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|326627179|gb|EGE33522.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 243

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + A+    GFD
Sbjct: 1   MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    + + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN +  P+   +       + L  A+   +    
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNNALAAI 227


>gi|134292928|ref|YP_001116664.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia vietnamiensis G4]
 gi|134136085|gb|ABO57199.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 260

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    L+ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAAA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   A R DA   D        L + R + +  +   +    +        + + D
Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 226 TDLKAKIDRAILDMV 240


>gi|317473005|ref|ZP_07932307.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
 gi|316899514|gb|EFV21526.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
          Length = 269

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 19/257 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVK 51
           M  K   V  +  ++      +  +          L  +K    L  G++          
Sbjct: 1   MRVKKLLVLCVSAVLAGSMLLAGCSKKEESKTDESLQYVKDNKELILGLDASFPPMGFTD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +    GFD+D  + ++  +     K++  P+N   +   LQ K ID +      T  ++
Sbjct: 61  KDQKIVGFDIDMAKEVTKRMG---IKLKLQPINWDSKDQELQGKTIDCIWNGL--TYSKD 115

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            +  +        + Q  ++ +K  I S+  +    + VQ G+T    +    +  N   
Sbjct: 116 RAKEMLCSESYMDNHQVLLVPEKSKIKSLKDIKKQQVGVQKGSTAADAVDQTKELKN--A 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F    EI        CDA   D   + A       P +  IL D +          
Sbjct: 174 KIVYFGNNVEILNDLGNG-CDAAVMDE--VVAKYYAKKDPGKFKILNDNLITEKYVIGFR 230

Query: 232 QGDTEWYNIVSWTHYAM 248
            GD +    V      M
Sbjct: 231 TGDEKLKAEVEKQLKDM 247


>gi|322387530|ref|ZP_08061139.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus infantis ATCC
           700779]
 gi|321141397|gb|EFX36893.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus infantis ATCC
           700779]
          Length = 271

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  +++S     +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSFLASFFLVACQSSSSSSQSAVEAIKQKGKLVVATSPDYAPFEFQALVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEVSSMSFDNVLTSLQTGKADLAIAGISATEERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        +  L+ A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLIRKTDLEKYKDLDSLASANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     ++ + DA   D     +    N   +   +   +      A AI +
Sbjct: 175 LTSLTNMGEAVNELQSGKVDAVHMDEPVALSYATKNADLAVATVSLTMKEGEENAVAIKK 234

Query: 233 GDTEWYNIVSWTHY 246
           G+++   +V     
Sbjct: 235 GNSDLKEVVDKVIQ 248


>gi|325848924|ref|ZP_08170434.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480568|gb|EGC83630.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 268

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 77/257 (29%), Gaps = 25/257 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILG-------------DIKKRGFLKCGINTGLVGFA 48
            K     +   +++  +  +   +                +I   G +  G +     + 
Sbjct: 5   KKILLAFVTTTLLVSCSGKNQKGNSNESDLSNNSNKKVSSEIVSDGVIDLGTSADFPPYE 64

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               N    G D +  + +   +  +   ++   ++      +++S ++D          
Sbjct: 65  FFDDNNKIVGIDAEIAQEIGKKLGVE---VKIKDMDFSSIIASIESGKLDGGIAGITANE 121

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F        Q  I+ K     +   L G  +  Q G+T E    D +   N
Sbjct: 122 DRKK--NVNFSDTYGKSVQKVIVKKDSSFKNPEDLKGKKVASQLGSTGETAAKDTYGEEN 179

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  F +  +   A    + DA   D          N    +  +L   ++K   A 
Sbjct: 180 ----VQSFSKNMDAIVALNNDKVDAVVLDDQVAEKFAAANK---DLKVLDKELAKDEYAI 232

Query: 229 AIIQGDTEWYNIVSWTH 245
           A+ + + +    V+   
Sbjct: 233 ALDKKNDKLLEEVNKAI 249


>gi|167564804|ref|ZP_02357720.1| ABC polar amino acid family transporter, periplasmic ligand binding
           protein [Burkholderia oklahomensis EO147]
 gi|167571972|ref|ZP_02364846.1| ABC polar amino acid family transporter, periplasmic ligand binding
           protein [Burkholderia oklahomensis C6786]
          Length = 251

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 82/239 (34%), Gaps = 22/239 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M     +S+ C  +    +    S  A           L+   +           NG   
Sbjct: 1   MKLQRLLSLACFALATTFAGFCGSAAAQTPD------VLRVATDATFAPMEYT-ENGVRT 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   AL+ A+      +Q+  ++ K     L + + D        T  R     + 
Sbjct: 54  GFDIDMMNALAKAMGK---SVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKV--VD 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G   ++ +   I +V+ L+G  + VQ GT +   L D F     +   +  E
Sbjct: 109 FAGPYYAGGLVALVKRDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFP----QITRVEVE 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           + +E+       R DA      A Y L  T        +L   ++      A+ + + +
Sbjct: 165 KNQEMFDLVGIGRADAAVTGKPAAYQLVRTRGG---FRVLDKPLTTEQYGIAVRKDEPQ 220


>gi|163858766|ref|YP_001633064.1| solute-binding protein [Bordetella petrii DSM 12804]
 gi|163262494|emb|CAP44797.1| probable solute-binding protein [Bordetella petrii]
          Length = 276

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 96/260 (36%), Gaps = 13/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M     +  + L+     +   +A  L +IK+RG L CG       F+          G+
Sbjct: 1   MSFKNILKYVPLLACLGVAGVAHADALANIKERGALVCGTLGTSEPFSFQDPKTRQVVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D C+A++  +      ++   ++   R   L   ++D+++ N  W    + +  + + 
Sbjct: 61  EIDLCKAIADHLGVK---LEVKMISVAARIPELAGGRVDVVAANLGW--SPDRAKQIDYS 115

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y   Q  ++ +     + + + L+G  +   AG+++E                + F+
Sbjct: 116 YQHYVSPQKILIRRDDAGTLKTNADLAGKRVSAVAGSSSEAGAKRLIP----DVTTVTFK 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTE 236
                  A +  +   + G    L   K   +  P +  I+ D +   P    + +G+  
Sbjct: 172 DPPTAFMALQQKKVSGFVGSELMLLKFKQDAESSPVKLEIIEDPLFVEPWGIGMAKGEDG 231

Query: 237 WYNIVSWTHYAMVTAEELGI 256
               V+     +  + ++ +
Sbjct: 232 LRTEVNKVLSGLEASGKMQV 251


>gi|15800563|ref|NP_286575.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H7 EDL933]
 gi|15830143|ref|NP_308916.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|16128779|ref|NP_415332.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26246786|ref|NP_752826.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           CFT073]
 gi|74311354|ref|YP_309773.1| glutamine ABC transporter periplasmic protein [Shigella sonnei
           Ss046]
 gi|82543257|ref|YP_407204.1| glutamine ABC transporter periplasmic protein [Shigella boydii
           Sb227]
 gi|89107662|ref|AP_001442.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91209845|ref|YP_539831.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           UTI89]
 gi|110641015|ref|YP_668743.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           536]
 gi|117622992|ref|YP_851905.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           APEC O1]
 gi|157158136|ref|YP_001462005.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           E24377A]
 gi|157160288|ref|YP_001457606.1| glutamine ABC transporter periplasmic protein [Escherichia coli HS]
 gi|168749990|ref|ZP_02775012.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|168756600|ref|ZP_02781607.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764282|ref|ZP_02789289.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767316|ref|ZP_02792323.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|168779358|ref|ZP_02804365.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787027|ref|ZP_02812034.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC869]
 gi|168799912|ref|ZP_02824919.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC508]
 gi|170020833|ref|YP_001725787.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           ATCC 8739]
 gi|170080470|ref|YP_001729790.1| glutamine ABC transporter periplasmic binding protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170680496|ref|YP_001742915.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           SMS-3-5]
 gi|188494775|ref|ZP_03002045.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli 53638]
 gi|191166144|ref|ZP_03027978.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli B7A]
 gi|191173737|ref|ZP_03035260.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli F11]
 gi|193064406|ref|ZP_03045487.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli E22]
 gi|194428193|ref|ZP_03060736.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli B171]
 gi|194438450|ref|ZP_03070540.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli 101-1]
 gi|195936852|ref|ZP_03082234.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809600|ref|ZP_03251937.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814977|ref|ZP_03256156.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822633|ref|ZP_03262952.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397153|ref|YP_002269481.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|209918058|ref|YP_002292142.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           SE11]
 gi|215485898|ref|YP_002328329.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217326304|ref|ZP_03442388.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218553397|ref|YP_002386310.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           IAI1]
 gi|218557716|ref|YP_002390629.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           S88]
 gi|218694285|ref|YP_002401952.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           55989]
 gi|218699185|ref|YP_002406814.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           IAI39]
 gi|218704189|ref|YP_002411708.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           UMN026]
 gi|227884226|ref|ZP_04002031.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Escherichia coli 83972]
 gi|237707229|ref|ZP_04537710.1| periplasmic glutamine-binding protein [Escherichia sp. 3_2_53FAA]
 gi|238900070|ref|YP_002925866.1| glutamine transporter subunit [Escherichia coli BW2952]
 gi|253774186|ref|YP_003037017.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160888|ref|YP_003043996.1| glutamine ABC transporter periplasmic protein [Escherichia coli B
           str. REL606]
 gi|254792006|ref|YP_003076843.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|256021118|ref|ZP_05434983.1| glutamine ABC transporter periplasmic protein [Shigella sp. D9]
 gi|256023593|ref|ZP_05437458.1| glutamine ABC transporter periplasmic protein [Escherichia sp.
           4_1_40B]
 gi|260843054|ref|YP_003220832.1| periplasmic glutamine-binding protein GlnH [Escherichia coli
           O103:H2 str. 12009]
 gi|260854103|ref|YP_003227994.1| periplasmic glutamine-binding protein GlnH [Escherichia coli
           O26:H11 str. 11368]
 gi|260866978|ref|YP_003233380.1| periplasmic glutamine-binding protein GlnH [Escherichia coli
           O111:H- str. 11128]
 gi|261225460|ref|ZP_05939741.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258571|ref|ZP_05951104.1| periplasmic glutamine-binding protein GlnH [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291281808|ref|YP_003498626.1| hypothetical protein G2583_1039 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404111|ref|ZP_06648105.1| glnH [Escherichia coli FVEC1412]
 gi|293409187|ref|ZP_06652763.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298379893|ref|ZP_06989498.1| glnH [Escherichia coli FVEC1302]
 gi|300816459|ref|ZP_07096681.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           107-1]
 gi|300824272|ref|ZP_07104389.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           119-7]
 gi|300898304|ref|ZP_07116653.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           198-1]
 gi|300907141|ref|ZP_07124806.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           84-1]
 gi|300922836|ref|ZP_07138922.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           182-1]
 gi|300929384|ref|ZP_07144855.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           187-1]
 gi|300939849|ref|ZP_07154485.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           21-1]
 gi|300947104|ref|ZP_07161321.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           116-1]
 gi|300957011|ref|ZP_07169259.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           175-1]
 gi|300991896|ref|ZP_07179721.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           200-1]
 gi|300993355|ref|ZP_07180354.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           45-1]
 gi|301020688|ref|ZP_07184759.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           69-1]
 gi|301051266|ref|ZP_07198094.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           185-1]
 gi|301303569|ref|ZP_07209691.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           124-1]
 gi|301328005|ref|ZP_07221168.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           78-1]
 gi|301646244|ref|ZP_07246138.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           146-1]
 gi|306812786|ref|ZP_07446979.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           NC101]
 gi|307313779|ref|ZP_07593396.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|309798041|ref|ZP_07692417.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           145-7]
 gi|312969165|ref|ZP_07783372.1| glutamine-binding periplasmic protein [Escherichia coli 2362-75]
 gi|312970888|ref|ZP_07785067.1| glutamine-binding periplasmic protein [Escherichia coli 1827-70]
 gi|331646030|ref|ZP_08347133.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           M605]
 gi|331651820|ref|ZP_08352839.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           M718]
 gi|331662168|ref|ZP_08363091.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA143]
 gi|331672317|ref|ZP_08373108.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA280]
 gi|331676549|ref|ZP_08377245.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           H591]
 gi|331682318|ref|ZP_08382937.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           H299]
 gi|84028666|sp|P0AEQ5|GLNH_ECO57 RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP;
           Flags: Precursor
 gi|84028667|sp|P0AEQ4|GLNH_ECOL6 RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP;
           Flags: Precursor
 gi|84028668|sp|P0AEQ3|GLNH_ECOLI RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP;
           Flags: Precursor
 gi|12513810|gb|AAG55183.1|AE005262_3 periplasmic glutamine-binding protein; permease [Escherichia coli
           O157:H7 str. EDL933]
 gi|26107185|gb|AAN79369.1|AE016757_273 Glutamine-binding periplasmic protein precursor [Escherichia coli
           CFT073]
 gi|41569|emb|CAA32382.1| unnamed protein product [Escherichia coli K-12]
 gi|1651365|dbj|BAA35483.1| glutamine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1787031|gb|AAC73898.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13360348|dbj|BAB34312.1| permease of periplasmic glutamine-binding protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|73854831|gb|AAZ87538.1| periplasmic glutamine-binding protein [Shigella sonnei Ss046]
 gi|81244668|gb|ABB65376.1| periplasmic glutamine-binding protein [Shigella boydii Sb227]
 gi|91071419|gb|ABE06300.1| periplasmic glutamine-binding protein; permease [Escherichia coli
           UTI89]
 gi|110342607|gb|ABG68844.1| glutamine-binding periplasmic protein precursor [Escherichia coli
           536]
 gi|115512116|gb|ABJ00191.1| glutamine ABC transporter periplasmic-binding protein [Escherichia
           coli APEC O1]
 gi|157065968|gb|ABV05223.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli HS]
 gi|157080166|gb|ABV19874.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli E24377A]
 gi|169755761|gb|ACA78460.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|169888305|gb|ACB02012.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170518214|gb|ACB16392.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli SMS-3-5]
 gi|188015745|gb|EDU53867.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|188489974|gb|EDU65077.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli 53638]
 gi|189003061|gb|EDU72047.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|189356243|gb|EDU74662.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363471|gb|EDU81890.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365671|gb|EDU84087.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373187|gb|EDU91603.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC869]
 gi|189377799|gb|EDU96215.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC508]
 gi|190903753|gb|EDV63468.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli B7A]
 gi|190905987|gb|EDV65603.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli F11]
 gi|192928868|gb|EDV82481.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli E22]
 gi|194413753|gb|EDX30032.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli B171]
 gi|194422674|gb|EDX38671.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli 101-1]
 gi|208729401|gb|EDZ79002.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208731625|gb|EDZ80313.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208738118|gb|EDZ85801.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209158553|gb|ACI35986.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|209775788|gb|ACI86206.1| permease of periplasmic glutamine-binding protein [Escherichia
           coli]
 gi|209775790|gb|ACI86207.1| permease of periplasmic glutamine-binding protein [Escherichia
           coli]
 gi|209775792|gb|ACI86208.1| permease of periplasmic glutamine-binding protein [Escherichia
           coli]
 gi|209775794|gb|ACI86209.1| permease of periplasmic glutamine-binding protein [Escherichia
           coli]
 gi|209775796|gb|ACI86210.1| permease of periplasmic glutamine-binding protein [Escherichia
           coli]
 gi|209911317|dbj|BAG76391.1| glutamine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|215263970|emb|CAS08311.1| glutamine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217322525|gb|EEC30949.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218351017|emb|CAU96721.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Escherichia coli 55989]
 gi|218360165|emb|CAQ97714.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Escherichia coli IAI1]
 gi|218364485|emb|CAR02167.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Escherichia coli S88]
 gi|218369171|emb|CAR16926.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Escherichia coli IAI39]
 gi|218431286|emb|CAR12164.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Escherichia coli UMN026]
 gi|222032541|emb|CAP75280.1| glutamine-binding periplasmic protein [Escherichia coli LF82]
 gi|226898439|gb|EEH84698.1| periplasmic glutamine-binding protein [Escherichia sp. 3_2_53FAA]
 gi|227838978|gb|EEJ49444.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Escherichia coli 83972]
 gi|238861341|gb|ACR63339.1| glutamine transporter subunit [Escherichia coli BW2952]
 gi|242376603|emb|CAQ31312.1| glnH, subunit of glutamine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325230|gb|ACT29832.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972789|gb|ACT38460.1| glutamine ABC transporter periplasmic protein [Escherichia coli B
           str. REL606]
 gi|253977009|gb|ACT42679.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           BL21(DE3)]
 gi|254591406|gb|ACT70767.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257752752|dbj|BAI24254.1| periplasmic glutamine-binding protein GlnH [Escherichia coli
           O26:H11 str. 11368]
 gi|257758201|dbj|BAI29698.1| periplasmic glutamine-binding protein GlnH [Escherichia coli
           O103:H2 str. 12009]
 gi|257763334|dbj|BAI34829.1| periplasmic glutamine-binding protein GlnH [Escherichia coli
           O111:H- str. 11128]
 gi|260450042|gb|ACX40464.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli DH1]
 gi|281177947|dbj|BAI54277.1| glutamine ABC transporter substrate binding component [Escherichia
           coli SE15]
 gi|284920663|emb|CBG33726.1| glutamine ABC transporter, substrate-binding protein [Escherichia
           coli 042]
 gi|290761681|gb|ADD55642.1| hypothetical protein G2583_1039 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291428697|gb|EFF01722.1| glnH [Escherichia coli FVEC1412]
 gi|291469655|gb|EFF12139.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294491983|gb|ADE90739.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli IHE3034]
 gi|298279591|gb|EFI21099.1| glnH [Escherichia coli FVEC1302]
 gi|300297083|gb|EFJ53468.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           185-1]
 gi|300305506|gb|EFJ60026.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           200-1]
 gi|300316204|gb|EFJ65988.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           175-1]
 gi|300358006|gb|EFJ73876.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           198-1]
 gi|300398563|gb|EFJ82101.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           69-1]
 gi|300401108|gb|EFJ84646.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           84-1]
 gi|300406610|gb|EFJ90148.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           45-1]
 gi|300420868|gb|EFK04179.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           182-1]
 gi|300453269|gb|EFK16889.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           116-1]
 gi|300455283|gb|EFK18776.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           21-1]
 gi|300462675|gb|EFK26168.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           187-1]
 gi|300523246|gb|EFK44315.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           119-7]
 gi|300531149|gb|EFK52211.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           107-1]
 gi|300841068|gb|EFK68828.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           124-1]
 gi|300845497|gb|EFK73257.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           78-1]
 gi|301075515|gb|EFK90321.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           146-1]
 gi|305853549|gb|EFM53988.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           NC101]
 gi|306906419|gb|EFN36933.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|307552656|gb|ADN45431.1| glutamine-binding periplasmic protein [Escherichia coli ABU 83972]
 gi|307627779|gb|ADN72083.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           UM146]
 gi|308118371|gb|EFO55633.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           145-7]
 gi|309701089|emb|CBJ00387.1| glutamine ABC transporter, substrate-binding protein [Escherichia
           coli ETEC H10407]
 gi|310336649|gb|EFQ01816.1| glutamine-binding periplasmic protein [Escherichia coli 1827-70]
 gi|312286567|gb|EFR14480.1| glutamine-binding periplasmic protein [Escherichia coli 2362-75]
 gi|312945329|gb|ADR26156.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315060047|gb|ADT74374.1| glutamine transporter subunit [Escherichia coli W]
 gi|315135461|dbj|BAJ42620.1| hypothetical protein ECDH1ME8569_0764 [Escherichia coli DH1]
 gi|315257800|gb|EFU37768.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           85-1]
 gi|315287249|gb|EFU46661.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           110-3]
 gi|315292567|gb|EFU51919.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           153-1]
 gi|315299343|gb|EFU58595.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           16-3]
 gi|315619815|gb|EFV00334.1| glutamine-binding periplasmic protein [Escherichia coli 3431]
 gi|320192712|gb|EFW67353.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Escherichia coli O157:H7 str. EC1212]
 gi|320196693|gb|EFW71316.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Escherichia coli WV_060327]
 gi|320199000|gb|EFW73597.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Escherichia coli EC4100B]
 gi|320637674|gb|EFX07466.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320642800|gb|EFX12001.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320648256|gb|EFX16911.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320654093|gb|EFX22161.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320659716|gb|EFX27272.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664187|gb|EFX31338.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323155821|gb|EFZ41990.1| glutamine-binding periplasmic protein [Escherichia coli EPECa14]
 gi|323159630|gb|EFZ45609.1| glutamine-binding periplasmic protein [Escherichia coli E128010]
 gi|323165732|gb|EFZ51518.1| glutamine-binding periplasmic protein [Shigella sonnei 53G]
 gi|323172272|gb|EFZ57910.1| glutamine-binding periplasmic protein [Escherichia coli LT-68]
 gi|323175569|gb|EFZ61164.1| glutamine-binding periplasmic protein [Escherichia coli 1180]
 gi|323185033|gb|EFZ70399.1| glutamine-binding periplasmic protein [Escherichia coli 1357]
 gi|323190939|gb|EFZ76206.1| glutamine-binding periplasmic protein [Escherichia coli RN587/1]
 gi|323379394|gb|ADX51662.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli KO11]
 gi|323938166|gb|EGB34426.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1520]
 gi|323942684|gb|EGB38849.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E482]
 gi|323947103|gb|EGB43115.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H120]
 gi|323953526|gb|EGB49392.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H252]
 gi|323958100|gb|EGB53809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H263]
 gi|323963058|gb|EGB58629.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H489]
 gi|323967413|gb|EGB62834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli M863]
 gi|323969549|gb|EGB64838.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TA007]
 gi|323976803|gb|EGB71891.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TW10509]
 gi|324009685|gb|EGB78904.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           57-2]
 gi|324013078|gb|EGB82297.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           60-1]
 gi|324018492|gb|EGB87711.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           117-3]
 gi|324116235|gb|EGC10157.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1167]
 gi|326338301|gb|EGD62130.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Escherichia coli O157:H7 str. 1125]
 gi|326346279|gb|EGD70017.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Escherichia coli O157:H7 str. 1044]
 gi|327253598|gb|EGE65227.1| glutamine-binding periplasmic protein [Escherichia coli STEC_7v]
 gi|330910555|gb|EGH39065.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Escherichia coli AA86]
 gi|331044782|gb|EGI16909.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           M605]
 gi|331050098|gb|EGI22156.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           M718]
 gi|331060590|gb|EGI32554.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA143]
 gi|331070512|gb|EGI41876.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA280]
 gi|331075238|gb|EGI46536.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           H591]
 gi|331079949|gb|EGI51128.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           H299]
 gi|332104697|gb|EGJ08043.1| periplasmic glutamine-binding protein [Shigella sp. D9]
          Length = 248

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|325062715|gb|ADY66405.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 300

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 99/285 (34%), Gaps = 10/285 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +     +L +  L  T  + +      L  I + G ++ G     + F+ +    +  
Sbjct: 1   MQRSTLWLMLGVFSLLPTIAAADETQPPTLETIARTGTIRLGFADRNLPFSYMGIGPEPI 60

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ ++ C  ++      +     KI ++      R   L    ID+    +  T  R   
Sbjct: 61  GYSIELCLKVADSIKKKLGLPELKIDFVKRTPSNRITLLNDGTIDMECVASTNTEERRK- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    +  G  ++  K   ++SVS L+G ++ V  GT     L    +   +    
Sbjct: 120 -AVWFSYSHFITGTRYVALKSSNMTSVSDLAGRTVVVTTGTINISQLNVLNRKLGLNIAV 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQ 232
           +  +  E         R  A+  D   L +      +P ++ I  + +    P    + +
Sbjct: 179 LQNDSTEGSFDMVTEDRASAFVMDDILLRSFVAETGKPEDYSISNEYLAPPQPYGLMLRR 238

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           GDT + N V+     +  + E+                 +++R L
Sbjct: 239 GDTAFKNAVNEALGKIYASGEINAIYDKWFNAPIPPNGINLKRPL 283


>gi|323142757|ref|ZP_08077472.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
 gi|322417470|gb|EFY08089.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
          Length = 283

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 73/257 (28%), Gaps = 13/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      + L     ++ S               + G +     F    + G+  GFD
Sbjct: 19  MQRLLRFFAMGLCAAVISTSSAAEGGTDA--NNKVWRVGCDAAFAPFTFTDSKGELIGFD 76

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA+  +   +   +             L +  ID++      T  R     + F  
Sbjct: 77  VDLIRAMGKSRGVE---VSIKSYPFDSIIPTLITDNIDLIISGFTITPERAE--RVDFSD 131

Query: 121 ITYFDGQGF--IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y  G  F  +        ++  L  A ICVQ GT+  + L               F  
Sbjct: 132 PYYRCGLTFLTLTENADKYKTLEDLKDAEICVQLGTSGAVFLEKAMP----NAKIKRFNS 187

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E         C A   D        +T+ R                  A+ +GD +  
Sbjct: 188 PPETYLELIGKGCAAVLNDRPVNDYFMVTSGRKDIVSRNITTDDSEYYGIAMRKGDKQMV 247

Query: 239 NIVSWTHYAMVTAEELG 255
           ++V+     +    E  
Sbjct: 248 DLVNKALKDVQENGEFE 264


>gi|260597204|ref|YP_003209775.1| glutamine ABC transporter periplasmic protein [Cronobacter
           turicensis z3032]
 gi|260216381|emb|CBA29431.1| Glutamine-binding periplasmic protein [Cronobacter turicensis
           z3032]
          Length = 293

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 85/245 (34%), Gaps = 21/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 48  KSVFKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 97

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 98  LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDVALAGITITDERKK--AIDFSDGY 152

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 153 YTSGLLVMVKANNNDVKSVKDLDGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 208

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + ++      A  +G  +  N V
Sbjct: 209 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLAGQQYGIAFPKGSDDLRNKV 267

Query: 242 SWTHY 246
           +    
Sbjct: 268 NGALK 272


>gi|260463006|ref|ZP_05811209.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259031127|gb|EEW32400.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 262

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 88/245 (35%), Gaps = 11/245 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                 +  + L   + + +A  L DI KRG L+  + T    F+ V ANG+  G  V+ 
Sbjct: 2   KIARLFIAGLALAGLTTAASAGALDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVEL 61

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  +    + + +   +      AL S + D+L  +   TL R   + +AF     
Sbjct: 62  AELMAKEMGVKITFLDF---DWDGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYM 116

Query: 124 FDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           + G            +       G  I V  G T E      F   ++K           
Sbjct: 117 YTGSTVFTKADSKFKTTEDCKAKGTKIAVLLGATGEKEAKAAFPDADIKS---YKGGGPL 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  A    + D    D+SA+          +   I+PD++SK PLA A    + +    +
Sbjct: 174 LLDAVNNGQADCGVNDVSAVKGQSTAYPAGT-FTIMPDLLSKEPLAFATRYDEPDLLVWM 232

Query: 242 SWTHY 246
           +    
Sbjct: 233 NLFLN 237


>gi|225574973|ref|ZP_03783583.1| hypothetical protein RUMHYD_03052 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037820|gb|EEG48066.1| hypothetical protein RUMHYD_03052 [Blautia hydrogenotrophica DSM
           10507]
          Length = 282

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 72/259 (27%), Gaps = 25/259 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----------------ILGDIKKRGFLKCGINTGL 44
           M +   + +L  ++          S                   DI   G    G +   
Sbjct: 1   MKRRAIIVLLAAVMTVGVFAGCKGSNESDSAKTEETADGGESKDDILGDGVFTVGFDAEY 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  +   G++ GFD+D  RA+  A           P+N   +   L S  ID +    
Sbjct: 61  PPFGYMDDTGEYVGFDLDLARAVCEAKGWKFEA---KPVNWDAKDSELNSGTIDCIWNGF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--D 162
                 +      +      + Q  +     GI S+  L+G ++ VQA +     L   D
Sbjct: 118 TINGRED---DYTWTEPYLNNEQVIVAKADAGIESLDDLAGKAVVVQAASAALDALNNDD 174

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                                    +   DA   DI          +     VIL + I 
Sbjct: 175 NKALAESFGSLTENPDYNTAFMNLESGAADAVAIDIGVANYQLSQREEG-AFVILDEPIQ 233

Query: 223 KSPLAPAIIQGDTEWYNIV 241
                    +G+    + V
Sbjct: 234 SEQYGIGFKKGNDALKDAV 252


>gi|121604395|ref|YP_981724.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120593364|gb|ABM36803.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 268

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 10/240 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + + +A  + DIKK+G L  G+      +  + ++    G+D D  R L+  +    
Sbjct: 24  SAWAPAASAQSVADIKKKGELTVGMLVDFPPYGTMNSSNQPDGYDADVARLLAKDLGVK- 82

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +  +P+    R   L + ++D+L  +   T  R   +   F              KK 
Sbjct: 83  --VNLVPVTGPNRIPFLLTNKVDLLVASLAVTPERAKQVQ--FSKPYAAASIVLYGDKKA 138

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + + + L G  + V   +T ++ L               F+       A  + + DA  
Sbjct: 139 SLKAPADLKGKRVGVARASTQDIALTAAAPE---GTEIRRFDDDASAMQALLSGQIDAI- 194

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              S   A ++    P+       ++ +  +  A+  G  E    V           EL 
Sbjct: 195 -GCSTTVAAQIAKRAPANTFENKFVLRQQVMGVAMRPGQAELLKTVDDFVARNTANGELN 253


>gi|315038756|ref|YP_004032324.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           amylovorus GRL 1112]
 gi|312276889|gb|ADQ59529.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           amylovorus GRL 1112]
          Length = 286

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 99/263 (37%), Gaps = 30/263 (11%)

Query: 2   YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43
            K F   +S++  +++  ++                  +N + +  IK+RG+++ G+   
Sbjct: 4   RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L  +  V + G   GFD+   R L+  +   P   ++  LN   R  AL S ++D++  N
Sbjct: 64  LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSDKVDMVLAN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +  K   I+S  QL G  + +  G+T E   A  
Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYFAKR 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                     + F+   +   A +  R  A   D S LYA       P   V +  I   
Sbjct: 179 -----PGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231

Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246
             +APA+ +G+       +    
Sbjct: 232 QFIAPAVKKGNKSLLKWTNKQIN 254


>gi|257461101|ref|ZP_05626199.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441475|gb|EEV16620.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 267

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 96/246 (39%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  ++    LF       A+ L  IK++G ++ GI+  L   + V  +G + GF+
Sbjct: 1   MKKIIFALLIASCSLF-------ANSLAQIKEKGLIRIGIDGSLPPLS-VSEDGKYSGFE 52

Query: 61  VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +     LS  IF D   KI+Y+     +R  A+Q  ++D+       T  RE    + F 
Sbjct: 53  ISLIEELSKEIFGDKGGKIEYVVTLGNDRITAVQDNKVDLDIAAITVTKEREKL--VDFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    G +      I +V  L    I  + GTT           +   +  I     
Sbjct: 111 NPYFSVNIGVLTRTDDNIKTVDDLQDKEILAEPGTTAFDYF------NKEGFKVISCASS 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A ++ R   Y  D   +    + + +    V + ++ +   LA A+ +G+ +  N
Sbjct: 165 SECFRALKSGRGSGYADDNMVVLGYSVVDRK--VEVNIKNLGTTDFLAIAVQKGNDDLLN 222

Query: 240 IVSWTH 245
            ++   
Sbjct: 223 ALNDGL 228


>gi|228941316|ref|ZP_04103869.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228974248|ref|ZP_04134818.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980839|ref|ZP_04141144.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           Bt407]
 gi|228779008|gb|EEM27270.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           Bt407]
 gi|228785588|gb|EEM33597.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818475|gb|EEM64547.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326941934|gb|AEA17830.1| arginine-binding protein [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 259

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|78065025|ref|YP_367794.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77965770|gb|ABB07150.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 266

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|294794911|ref|ZP_06760046.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Veillonella sp. 3_1_44]
 gi|294454273|gb|EFG22647.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Veillonella sp. 3_1_44]
          Length = 270

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 88/270 (32%), Gaps = 17/270 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  + ++ F +     +   + +    +  G++            G+  G D+
Sbjct: 4   KKMMAVGLAAVSMMAFVTGCGGDAKKANTELPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +     D   +++  ++   +   L+SK+ID L      +  RE    + F   
Sbjct: 64  DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNT 118

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              D Q  I+      I   + L+G  + VQ  +T E  L +   +         +    
Sbjct: 119 YMKDKQYIIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQND-PSGKTVKETKSYADFV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239
                    R DA   D     A  L    P ++ I+          A    + DT   +
Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235

Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262
            ++           A   AE+   +  +++
Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGADLD 265


>gi|16330280|ref|NP_441008.1| hypothetical protein sll1762 [Synechocystis sp. PCC 6803]
 gi|1652769|dbj|BAA17688.1| sll1762 [Synechocystis sp. PCC 6803]
          Length = 382

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F  + + L++    + +  A   +  I + G L  G N   V F+ +  N +  G+
Sbjct: 84  MLKQFSATFIGLLLATVGAQAAIAETVMEKIIRTGNLTIGANLDNVPFSYINDNNEVVGY 143

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D        +   +  D         +  +    L++ ++DI+  +T +T  R+    
Sbjct: 144 SIDIADRIREEVGKELGRDVVLQIVEVQDMSDALPKLKTGELDIVC-DTAFTWERDRY-- 200

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F       G   ++     I+S   L G  + +   T     + D  K    +   + 
Sbjct: 201 VDFTVSYAVAGIQLLVPNDTPINSRETLMGRRVAMVPNT----IVEDAVKIVQNEIEVVP 256

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              V     A +    DA  GD   L  L+   D P   VI     ++  +   + + + 
Sbjct: 257 VTSVRAGMEALKKGTVDAVAGDGIQLAGLRQVLDMPDTKVIPQPAETRYGVGCMVREDNP 316

Query: 236 EWYNIVSWTH 245
            +  + +   
Sbjct: 317 GFLRLANRAL 326


>gi|315222684|ref|ZP_07864573.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus anginosus F0211]
 gi|315188370|gb|EFU22096.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus anginosus F0211]
          Length = 277

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 14/255 (5%)

Query: 1   MY-KDFFVSILCLII-LFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M  K + ++I  LI+ L  T+ S  +          +++  +  G +   V     + NG
Sbjct: 1   MKIKRYVLAICGLILFLLLTACSNVSNPKVDNWSKYQQKKSITIGFDNTFVPMGFEQKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D   A+         K+ + P++   +   L +  ID++      T  R    
Sbjct: 61  QYVGFDIDLANAVFKEYG---IKVNWQPIDWDMKETELTNGTIDLIWNGYSATDERRK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY 171
            + F      + Q  +  K   I+  + +    +  Q G++       +    K     +
Sbjct: 116 KVQFTIPYMKNEQVLVTKKSSNIAKTADMKDKILGAQTGSSGYDEFEAHPELLKNLVKNH 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R D    D               ++ + P        A    
Sbjct: 176 KAAQYQSFTEALIDLQNSRIDGLLIDRVYANYYLKEEGILQDYYVFPAGFDSESFAVGAR 235

Query: 232 QGDTEWYNIVSWTHY 246
           + D +    ++    
Sbjct: 236 KTDKQLVENINQAFK 250


>gi|332074975|gb|EGI85447.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA41301]
          Length = 271

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L I F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLAIFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +  + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|317047481|ref|YP_004115129.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Pantoea sp. At-9b]
 gi|316949098|gb|ADU68573.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. At-9b]
          Length = 248

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      +  + L F+  ST A           L    +T  V F   + +  + GFD+D
Sbjct: 2   KSLIKVSVAALALAFSLSSTAAD--------KKLVVATDTAFVPFEFKQGD-QYVGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ++ +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDY---TLKPMDFSGIIPALQTRNVDVALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I S+  L+G  + V++GT +     DY KAH        F  ++ 
Sbjct: 108 YKSGLLVMVRSNENNIKSIDDLNGKVVAVKSGTGSV----DYAKAHIKSKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T  +      + + IS      A  +G  +    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAVGESISAQQYGIAFPKGSDDLREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|70729620|ref|YP_259359.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas
           fluorescens Pf-5]
 gi|68343919|gb|AAY91525.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas
           fluorescens Pf-5]
          Length = 259

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 86/265 (32%), Gaps = 22/265 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +  FT+ +  A           ++ GI  G   F+    +G   GFD
Sbjct: 1   MNKFALFGALALSLFSFTASADEA---------KPIRIGIEAGYPPFSMKTPDGKLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  ++         AL+ K+ID +  +   T  R+    + F  
Sbjct: 52  VDLGNALCEQM---QAKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK--NVDFTI 106

Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+M     I    ++L G  + V   +T +    +      +    + +   
Sbjct: 107 KYYHTPARFVMKAGTSIKDPLTELKGKKVGVLRASTHDRFATEVLVPAGID--LVRYGSQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E +    + R DA   D   L    L  D       +    +           A+ +GD
Sbjct: 165 QEANLDMVSGRVDALLADSVNLDDGFLKTDAGKGFAFVGPEYNDPKYFGGGAGIAVRKGD 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
            E     +     +    +    Q 
Sbjct: 225 QELAGKFNKAITEIRANGKYKQVQD 249


>gi|159037032|ref|YP_001536285.1| extracellular solute-binding protein [Salinispora arenicola
           CNS-205]
 gi|157915867|gb|ABV97294.1| extracellular solute-binding protein family 3 [Salinispora
           arenicola CNS-205]
          Length = 294

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 86/227 (37%), Gaps = 9/227 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S +  + +   +K G      GF     +G+ +GFDV+  + ++  +     KI+++
Sbjct: 41  AAGSTMERLNEAQAIKIGTKFDQPGFGLKGLSGEPEGFDVEVAKIIAKELGIPEDKIEWV 100

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
              +K R   + ++ +D+++        R+  +   F    Y  GQ  ++ K     +  
Sbjct: 101 EAPSKVREDVIVNETVDLVAATYTINPKRKERIA--FAGPYYEAGQNIMVRKDDTSITGP 158

Query: 142 QLS---GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
                    +C   G+T    +  Y K  ++    ++F+  ++   A    + DA T D 
Sbjct: 159 DSFADGTKKVCSVTGSTPAEEIRTYVK--DVSSQLVLFDTYDKCRDALNGGQVDAVTTDN 216

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L          +   +  +  +K P    + + D E+ + V+   
Sbjct: 217 VILLGYIA--KDEASFKLAGENFTKEPYGIGVKKDDAEFRDFVNDVL 261


>gi|17549152|ref|NP_522492.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17431403|emb|CAD18082.1| probable amino-acid-binding periplasmic abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 280

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67
           +  L  L   SF   A    +I+K   L+CG    +  FA       +  GFDVD C+AL
Sbjct: 10  LTVLACLCAASFPVLADQWAEIQKNKALRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +       +  PL+ + R   ++  ++D+   N  +TL R   +   F    Y   +
Sbjct: 70  ARHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              +       S +   G  +    G+T+EL++            P+ F+       A +
Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178

Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +      +   +  L   +     E  ++ + +   P+   + +G+      V+    
Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKMIAEPMIYQPIGVGMKKGEPALLAKVNEALL 238

Query: 247 AMVTAEELG 255
           AM  A E+ 
Sbjct: 239 AMDKAGEIN 247


>gi|170731786|ref|YP_001763733.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|254246506|ref|ZP_04939827.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124871282|gb|EAY62998.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|169815028|gb|ACA89611.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 266

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           FT+ + +A  +L  +KK G L+ G+      F     +G  +GFDVD   A++  +    
Sbjct: 19  FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              Q++P         LQ+ + D++      T  R+    L F     +     I  K  
Sbjct: 79  ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S+    G  + V  GT       D             +    E      A R +A
Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D   L  +  T++ P     + +   +  +A    +G+ ++   ++   
Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239


>gi|319651468|ref|ZP_08005596.1| hypothetical protein HMPREF1013_02208 [Bacillus sp. 2_A_57_CT2]
 gi|317396783|gb|EFV77493.1| hypothetical protein HMPREF1013_02208 [Bacillus sp. 2_A_57_CT2]
          Length = 263

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 14/217 (6%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVK-ANG 54
           M K   F +SIL + +L     S  AS      +   +  L  G +     F  V  A G
Sbjct: 1   MKKVIMFALSILLVGVLAACGTSEEASTGSGSGENSDKKVLTMGTSADYPPFEYVDSAKG 60

Query: 55  -DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFDVD  +A++  +  +   IQ   ++      AL++ Q+D +      T  R+  
Sbjct: 61  EEIIGFDVDLAKAIAEKLGYE---IQVKDMDFNGLIPALETNQVDFVLSGMTPTEERK-- 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  + Y      +  K  GI S+  L+G ++ VQ  +       +  +  +MK   
Sbjct: 116 QNVDFSDVYYTASHMIVSKKGSGIESLEDLNGKTLGVQLASIQADKAEEIGETVDMKVEN 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               R+ E+     A R DA   +          N+ 
Sbjct: 176 R--NRIPELIQEIMADRFDAAMIEDIVAKGYFEKNED 210


>gi|330812507|ref|YP_004356969.1| putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380615|gb|AEA71965.1| putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 261

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 87/261 (33%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +     +  L   L       +A  L D+ KRG LK  +      F  V  +   +G 
Sbjct: 1   MIQRCSALLTALFASLMLCQLPAHADGLEDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            I+++  L G +I V  G   ++ L               FE  
Sbjct: 116 SAYAPFYLAVFGPPDAAINNLDDLKGKTISVTRGAIEDIELTKVAPE---GTTIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY A + D        + A  ++   P     L   +  SP+   + + +     
Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230

Query: 240 IVSWTHYAMVTAEELGITQKN 260
            V+       T   L    + 
Sbjct: 231 KVNQILATAKTDGSLEKNSQT 251


>gi|288870949|ref|ZP_06115884.2| amino acid ABC transporter, amino acid-binding protein [Clostridium
           hathewayi DSM 13479]
 gi|288865282|gb|EFC97580.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           hathewayi DSM 13479]
          Length = 313

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 8/215 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G    G +        V  +G++ GFD++    ++  +  +       P++   + + L+
Sbjct: 84  GTFTVGFDQEFPPMGYVGDDGEYTGFDLEVAEEVAKRLGMEFVP---QPVDWAAKDMELE 140

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S  ID +      T   +      +      + Q F++  + GI +++ L+G  + VQA 
Sbjct: 141 SGNIDCIWNGFTMTGRED---DYTWTEAYMANQQVFVVTAESGIKTLADLAGKVVEVQAE 197

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L D                        +    DA   D   + A      R  +
Sbjct: 198 SSAEAALKDDPNLTGTFGTLQSTPDYNTAFMDLQMGAVDAIAMDE--VVARFQIEQRQVD 255

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            ++L + ++    A    +G+    + V     A+
Sbjct: 256 FIVLDETLAAENYAVGFKKGNDALKDQVQAQLEAL 290


>gi|218705840|ref|YP_002413359.1| lysine/arginine/ornithine ABC transporter periplasmic-binding
           protein [Escherichia coli UMN026]
 gi|293405776|ref|ZP_06649768.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli FVEC1412]
 gi|298381459|ref|ZP_06991058.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli FVEC1302]
 gi|300896992|ref|ZP_07115471.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 198-1]
 gi|218432937|emb|CAR13831.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli UMN026]
 gi|291427984|gb|EFF01011.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli FVEC1412]
 gi|298278901|gb|EFI20415.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli FVEC1302]
 gi|300359173|gb|EFJ75043.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 198-1]
          Length = 260

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 89/279 (31%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    S                ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSLLVGLSAAASCYAALPE--------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTVDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|171779921|ref|ZP_02920825.1| hypothetical protein STRINF_01708 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281269|gb|EDT46704.1| hypothetical protein STRINF_01708 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 274

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 86/260 (33%), Gaps = 14/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M+    +     ++    S +   + + DIK +G L   +N     F     V       
Sbjct: 8   MFGGLALVASAFLLTACGSGNQKDTSVSDIKDKGTLVVAMNPEFAPFEFKTLVDGKDTIV 67

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A+   +      +++  ++      +LQS + D+       T  R+      
Sbjct: 68  GADVEIAKAIGEELGVK---VKFSSMSFNNVLASLQSGKADVAISGISATPERKK--AYN 122

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      ++ K      +  S L+G S+  Q G+  E   ++  K        + 
Sbjct: 123 FSEAYYESENVVLIKKTDVDKYTKTSSLAGLSVGTQKGSIQENVASEQLK----GSKVVA 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  E+    +  +  A   +          ND  +   I          A A+ +GD 
Sbjct: 179 LTQNGEMINELKNGQIQAVVLEKPIAEGYAANNDDLTIANIKLKNDDADAYAVALPKGDD 238

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +    V+     +  + ++ 
Sbjct: 239 KLTKEVNKVIKDLKDSGKID 258


>gi|330501280|ref|YP_004378149.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
 gi|328915566|gb|AEB56397.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
          Length = 261

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     +  L   L F + + +A  L DI K G LK  +      F  V  +   +G 
Sbjct: 1   MRKFHRTLLGTLFAALAFGASTAHADALEDISKAGVLKVAVPQDFPPFGSVGPDMKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +     K++  P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKL---AVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREAV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G        I+S+  L+G +I V  G+  ++ L++             FE  
Sbjct: 116 AAYAPFYLGVFGPDDAAIASLDDLAGKTISVTRGSIEDIELSNVAPK---GATIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY + + +        + A+  +   P     +   +  SP+   + +      +
Sbjct: 173 NSTIAAYLSGQVELIASGNVVMVAI--SEKNPKRVPSMKLKLKDSPVYVGVNKNQAALLD 230

Query: 240 IVSWTH 245
            V+   
Sbjct: 231 KVNAII 236


>gi|330809826|ref|YP_004354288.1| putative histidine-binding periplasmic protein precursor
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377934|gb|AEA69284.1| putative histidine-binding periplasmic protein precursor
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 260

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 75/240 (31%), Gaps = 22/240 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +      L  ++ F TS     S          L+ GI      FA    +    GFD 
Sbjct: 4   KRIALKLGLVSLLAFGTSLQAAESS---------LRIGIEAAYPPFASKTPDNAIVGFDY 54

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +AL + +     +  +          AL+ K++D +  +   T  R     + F   
Sbjct: 55  DIGQALCAEM---KVRCVWQEQEFDGLIPALKVKKVDAVISSMSITPER--LKSVDFTDR 109

Query: 122 TYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y      +  K  GI+   +QL G  I VQ  T  +  + D F         + +    
Sbjct: 110 YYRIPARLVFRKGSGINDIPAQLKGKRIGVQRATNFDRYVTDRFAPAG--AEVVRYGSQN 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           EI       R DA       +    L      +   +    ++          A+ + DT
Sbjct: 168 EIFLDLLGGRLDATMASSVVIDESLLKRPEGKDFEFVGPNFTEEQYFGTGIGIAVRKNDT 227


>gi|295107461|emb|CBL05004.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 274

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 81/235 (34%), Gaps = 17/235 (7%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
           +     + +            L+ G    + GF       G+ +G +VD  R L+  I  
Sbjct: 25  IALAGCAPDGD---------VLRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKG 75

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           DP+ +Q   +N   R   L +  +D        T  R+      F    Y D  G ++ K
Sbjct: 76  DPNALQVTGVNVTTRGAMLDNGTLDATLATFTITEARKK--SYNFSRPYYTDHIGVLVKK 133

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI+ ++ L G ++ V    TT   L        +      +    E+  A    R DA
Sbjct: 134 SSGITDLADLDGKTVGVALSATTRDKLTAAGDEIGIHMKFAEYSTYPEVKIALVTGRVDA 193

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           ++ D S L             ++L    +      A  + +T+  + +     AM
Sbjct: 194 FSVDRSILNGYV-----DDSTMLLDAQFAPQEYGVATKKSNTQLADQIDAAIGAM 243


>gi|212697318|ref|ZP_03305446.1| hypothetical protein ANHYDRO_01886 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675767|gb|EEB35374.1| hypothetical protein ANHYDRO_01886 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 268

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 80/261 (30%), Gaps = 28/261 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44
           M   K   ++ +   +L   S               ++N  +  +I   G +  G +   
Sbjct: 1   MKNLKKILLAFVTTTLLVSCSGKDQKGNSNESDLSNNSNKKVSSEIVSDGVIDLGTSADF 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             +     N    G D +  + +   +  +   ++   ++      +++S ++D      
Sbjct: 61  PPYEFFDDNNKIVGIDAEIAQEIGKKLGVE---VKIKDMDFSSIIASIESGKLDGGIAGI 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                R+    + F        Q  I+ K     +   L G  +  Q G+T E    D +
Sbjct: 118 TANEDRKK--NVNFSDTYGKSVQKVIVKKDSSFKNPEDLKGKKVASQLGSTGEAAAKDTY 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                      F +  +   A    + DA   D          N    +  +L   ++K 
Sbjct: 176 GE----EKVQSFSKNMDAIVALNNDKVDAVVLDDQVAEKFAAANK---DLKVLDKELAKD 228

Query: 225 PLAPAIIQGDTEWYNIVSWTH 245
             A A+ + + +    V+   
Sbjct: 229 EYAIALDKKNDKLLEEVNKAI 249


>gi|167745443|ref|ZP_02417570.1| hypothetical protein ANACAC_00134 [Anaerostipes caccae DSM 14662]
 gi|167655164|gb|EDR99293.1| hypothetical protein ANACAC_00134 [Anaerostipes caccae DSM 14662]
          Length = 269

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 82/257 (31%), Gaps = 19/257 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVK 51
           M  K   V  +  ++      +  +          L  +K    L  G++          
Sbjct: 1   MRVKKLLVLCVSAVLAGSMLLAGCSKKEESKTDESLQYVKDNKELILGLDASFPPMGFTD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +    GFD+D  + ++  +     K++  P+N   +   LQ K ID +      T   +
Sbjct: 61  KDQKIVGFDIDMAKEVTKRMG---IKLKLQPINWDSKDQELQGKTIDCIWNGL--TYSED 115

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            +  +        + Q  ++ +K  I S+  +    + VQ G+T    +    +  N   
Sbjct: 116 RAKEMLCSESYMDNHQVLLVPEKSKIKSLKDIKKQQVGVQKGSTAADAVDQTKELKN--A 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F    EI        CDA   D   + A       P +  IL D +          
Sbjct: 174 KIVYFGNNVEILNDLGNG-CDAAVMDE--VVAKYYAKKDPGKFKILNDNLITEKYVIGFR 230

Query: 232 QGDTEWYNIVSWTHYAM 248
            GD +    V      M
Sbjct: 231 TGDEKLKAEVEKQLKDM 247


>gi|24113297|ref|NP_707807.1| cystine transporter subunit [Shigella flexneri 2a str. 301]
 gi|24052304|gb|AAN43514.1| similar to periplasmic glutamine-binding protein; permease
           [Shigella flexneri 2a str. 301]
 gi|281601362|gb|ADA74346.1| periplasmic glutamine-binding protein; permease [Shigella flexneri
           2002017]
          Length = 285

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+ G L  G+      F+    +G   GF+V+F + 
Sbjct: 33  VMAVALVAGMSVKSFADEGLLNKVKESGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 93  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     I + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 148 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261

Query: 245 H 245
            
Sbjct: 262 I 262


>gi|52786315|ref|YP_092144.1| YqiX [Bacillus licheniformis ATCC 14580]
 gi|52348817|gb|AAU41451.1| YqiX [Bacillus licheniformis ATCC 14580]
          Length = 179

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   +    T+  T++S          L  G +     F     +    GFD
Sbjct: 1   MKKWMLLVVTACVTFALTACGTSSSSDDK----KTLVMGTSADYPPFESKDGD-KIVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL+     +   I+   ++      AL++ ++DI+      T  R+    + F  
Sbjct: 56  VDLAEALAEKTGHE---IEVKDMDFNGLVTALKTNKVDIVLSGMTPTPKRKK--QVDFSN 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           + Y      +  K  GI S+  L G ++ VQ G+  E    +    +++K  
Sbjct: 111 VYYTAHNMIVTKKSSGIKSLDDLKGKTVGVQLGSIQEEKAKELTPDYDLKVE 162


>gi|167994765|ref|ZP_02575856.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|16422914|gb|AAL23174.1| putative arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|205327421|gb|EDZ14185.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|267996685|gb|ACY91570.1| putative arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301160843|emb|CBW20374.1| putative arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312915452|dbj|BAJ39426.1| arginine ABC transporter substrate binding protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223226|gb|EFX48296.1| putative arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323132692|gb|ADX20122.1| putative arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
          Length = 246

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  + +   S S              L  G +     +  V A+    GFD
Sbjct: 1   MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  +   +      +L+ K+ D +    D T  RE    ++F  
Sbjct: 50  IDVANAVCKEM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K    + + L G  + ++ GTT +  L D          P+ ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 + +R +   GD   + A+        ++ I+ +  S           A+ + + 
Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKDND 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 218 ALLQEINAALDKVKASPEYA 237


>gi|294501176|ref|YP_003564876.1| arginine ABC transporter arginine-binding protein ArtP [Bacillus
           megaterium QM B1551]
 gi|294351113|gb|ADE71442.1| arginine ABC transporter, arginine-binding protein ArtP [Bacillus
           megaterium QM B1551]
          Length = 269

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 17/220 (7%)

Query: 1   MY-KDFF--VSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVK- 51
           M  K +    +I  L      +              D K +  L  G +     F  +  
Sbjct: 1   MKLKKWLSVTAIGLLTAGVLAACGAGEGTSNGGASSDDKDKKVLVMGTSADYPPFEYIDT 60

Query: 52  --ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              + +  GFDVD  +A+   +  D   +Q   +       ALQS ++D++      T  
Sbjct: 61  AKGDSEAIGFDVDLAKAIGKKLGYD---VQVKDMEFGGLIPALQSNKVDLVLAGMTPTEK 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F  + Y      +  K   I +  +L G ++ VQ  +       +  K  + 
Sbjct: 118 RKK--NVDFSDVYYEAKNMIVSKKDAPIKNAEELKGKTVGVQTSSIQADEAKEIAKEVD- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             +    +R+ E+    +++R DA   + +        + 
Sbjct: 175 GVNVTTRDRIPELIQEMKSNRIDAAIIEDTVAKGYVNKDK 214


>gi|225862406|ref|YP_002747784.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus 03BB102]
 gi|229154120|ref|ZP_04282245.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           ATCC 4342]
 gi|225789767|gb|ACO29984.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus 03BB102]
 gi|228629400|gb|EEK86102.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           ATCC 4342]
 gi|324324462|gb|ADY19722.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 264

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  + V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNASISSPEDLKGKKVGVVKASTFKNLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|116491635|ref|YP_811179.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni
           PSU-1]
 gi|290891244|ref|ZP_06554306.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429]
 gi|116092360|gb|ABJ57514.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Oenococcus oeni PSU-1]
 gi|290479208|gb|EFD87870.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429]
          Length = 282

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 7/228 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + ++     IKK   +K G++   +       +G   GFDVD   A    +     K+++
Sbjct: 36  TKSSDHWYRIKKSKEIKIGLDDTFIPMGFRNKSGKLIGFDVDLANATFKKLG---IKVEW 92

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+N   +   L   QID +      +  R+    +AF        Q  +   K  I+S 
Sbjct: 93  EPINWSTKEQLLNDGQIDAIWNGYTISAARKK--KVAFSIPYKKGTQVLVTLSKDKINSF 150

Query: 141 SQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + + G ++ +Q G+T +     Y       +K  P  ++  ++     +A R      D 
Sbjct: 151 ADMKGKTLGLQNGSTAQTQFQQYKNLLKKYVKGTPQKYDTFDKAFMDLKAGRIQGILVDS 210

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                         ++ I+              + D +    V+    
Sbjct: 211 MYAGYYVKHLSDSQDYKIIYGGYPTDENGVGFRKSDLKLREEVNTVLK 258


>gi|238792194|ref|ZP_04635829.1| Extracellular solute-binding protein family 3 [Yersinia intermedia
           ATCC 29909]
 gi|238728431|gb|EEQ19950.1| Extracellular solute-binding protein family 3 [Yersinia intermedia
           ATCC 29909]
          Length = 270

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 86/253 (33%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  ++     S    A  +  I        G++ G   F  +  +G+  GFD
Sbjct: 14  MKK----TLAAILTGLILSAPVAAQGIDTI------SFGVDGGYPPFDVLSPSGEITGFD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  ++    +    AL +++ D +  +   T  R+    + F  
Sbjct: 64  IDIANALCENL---HAKCVFVKQPFESMIAALNARKFDAIIASLTITEERKK--EVDFTD 118

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    +   + L G ++ VQ G+  E     ++         + +   
Sbjct: 119 RYYRSAAQLVARKGSPLLPDTASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D     +  +   R  +      +I    +      A+ + + 
Sbjct: 177 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNP 236

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 237 ALRDALNGAIKAI 249


>gi|254712434|ref|ZP_05174245.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M644/93/1]
 gi|254715507|ref|ZP_05177318.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M13/05/1]
          Length = 257

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L  +  +   +     K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 56  LDIANALCEAM---EAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 110

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 111 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 169 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 228

Query: 239 NIVSWTHY 246
              +    
Sbjct: 229 EQFNAAIK 236


>gi|332101261|gb|EGJ04607.1| cystine-binding periplasmic protein [Shigella sp. D9]
          Length = 285

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L+         +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 33  VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 93  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     + + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 148 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNGA 261

Query: 245 H 245
            
Sbjct: 262 I 262


>gi|307137436|ref|ZP_07496792.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           H736]
 gi|331641327|ref|ZP_08342462.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           H736]
 gi|331038125|gb|EGI10345.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           H736]
          Length = 248

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     E   + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-EFKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|302558020|ref|ZP_07310362.1| glutamate-binding protein [Streptomyces griseoflavus Tu4000]
 gi|302475638|gb|EFL38731.1| glutamate-binding protein [Streptomyces griseoflavus Tu4000]
          Length = 281

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 11/226 (4%)

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              G    K +G + GFDVD    ++  +  +  +I+++   + +R  AL    +  ++ 
Sbjct: 49  DQPGLGLKKPDGSFSGFDVDVATYVAKELGYEADQIEWVETKSADRENALARGDVKFIAA 108

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R+    + F        Q  ++ K   I+  + L+   +C   G+T+   +  
Sbjct: 109 TYSITDERKE--KVDFAGPYLLAHQDLLVKKDSDITEATDLNDKKLCSVTGSTSAQNVKK 166

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
            F     K          E  AA ++   DA T D S L           +  +    +S
Sbjct: 167 DFA---PKAQLKQVGTYSECVAALQSGAVDALTTDDSILAGFAAQEQYAGKFKLAGLKLS 223

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH------YAMVTAEELGITQKNIN 262
                  + +GDTE  + ++          A   A E        N
Sbjct: 224 NENYGIGVKKGDTETTDKINAALEKMVGDKAWDKAVEANFGPAEYN 269


>gi|229095071|ref|ZP_04226067.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-29]
 gi|229101173|ref|ZP_04231939.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-28]
 gi|228682301|gb|EEL36412.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-28]
 gi|228688401|gb|EEL42283.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock3-29]
          Length = 264

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     LQSK+ D +  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMGMKPAPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  ++              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKTLVS------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VKKVNKALDEII 239


>gi|242280779|ref|YP_002992908.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242123673|gb|ACS81369.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 261

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 75/250 (30%), Gaps = 16/250 (6%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +    +      LI + F   +      L  +K+ G +   ++ G   F       + 
Sbjct: 1   MRRFTALYLAVFTLLITVSFVGCAKQEKTGLAKVKEAGEVSFAMSGGYPPFNYFNKQNEL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  + ++  +      +             L+S     +  +   T  R+    +
Sbjct: 61  VGFDVDVAKEVAKRLGVKLKPVT---TEWSGIIEGLRSGIYSGILGSMAATEQRKKV--V 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y+ G    +       S  +L   ++ +  GTT E         +       ++
Sbjct: 116 DFSTPYYYSGAQMFVRTDSPFKSADELKSKAVGLVTGTTFEQD-----AKNLGVSDIRLY 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +          +   D    D   +  +   N    +   L   + K  +A A  + D  
Sbjct: 171 KDDTHTLTELSSGVIDGVITDR--VVGVNAMNSGKFKIKPLGSPLRKEDIAVAFRKEDKT 228

Query: 237 WYNIVSWTHY 246
             + V+    
Sbjct: 229 LTDEVNKILK 238


>gi|54309895|ref|YP_130915.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum SS9]
 gi|46914334|emb|CAG21113.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum SS9]
          Length = 272

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 83/252 (32%), Gaps = 25/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + + +  L  TS                ++ GI      F+  + +G+ KGFD
Sbjct: 15  MKKWILAAAM-VSALGATSLQAKEYT--------EIRFGIEGAYPPFSWTEPSGELKGFD 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K + +  +      +L +++ D +      T  R+    + F  
Sbjct: 66  VDMANALCEEL---QTKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 120

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   ++  K   I  S   L G  I VQ  TT +  L D F         + +   
Sbjct: 121 KYALIPNKYVAKKGTEIDFSTEGLKGVKIGVQRATTHDKYLTDNF---GDSVTIVRYGSF 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
           ++     +A R     GD SAL    +  +    +  +       P         A+ + 
Sbjct: 178 DDAYLDLKAGRIATVLGDASALEEGLINKEGGEGYEFIG-PSLTDPKWFGDGFGIALRKQ 236

Query: 234 DTEWYNIVSWTH 245
           D E    +    
Sbjct: 237 DKELTKKLDAAI 248


>gi|325496747|gb|EGC94606.1| glutamine ABC transporter periplasmic protein [Escherichia
           fergusonii ECD227]
          Length = 248

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVFKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T         + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNGR-FKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|225420155|ref|ZP_03762458.1| hypothetical protein CLOSTASPAR_06498 [Clostridium asparagiforme
           DSM 15981]
 gi|225041212|gb|EEG51458.1| hypothetical protein CLOSTASPAR_06498 [Clostridium asparagiforme
           DSM 15981]
          Length = 299

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 84/286 (29%), Gaps = 44/286 (15%)

Query: 1   MYKDFFVSILCLIILFFTSF-----------------------------------STNAS 25
           M K  F   +  ++ F  +                                    +  + 
Sbjct: 1   MKKKTFCLAMAAVMAFGLAGCGGAETKGEAATTVESTADTTAADTTAADKAADTSAAESE 60

Query: 26  ILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
              + +  G     G +        +  NG++ GFD++  + ++  +  +       P+ 
Sbjct: 61  TSAEAQAAGGHFIVGFDQEFPPMGFMGDNGEYTGFDLELAQEVAKRLGLEYQP---QPVI 117

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              + + L S  ID +      T          +      + Q F++    GI+S+  L 
Sbjct: 118 WDTKDMELDSGNIDCIWNGFTMTG---RESDYEWTEAYMANSQVFVVAADSGIASMDDLK 174

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +  QA ++    L +           +                 DA   D   + A 
Sbjct: 175 GKVVECQADSSALAALNENPDLTATFKELVTTADYNSAFMDLEQGAVDAIAMD--VIVAG 232

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                R ++ VIL D +S         +G+TE  + V  T   M  
Sbjct: 233 YQIQQRNADFVILEDHLSAEEYGVGFKKGNTELRDKVQKTLEEMAQ 278


>gi|194288893|ref|YP_002004800.1| cysteine ABC transporter periplasmic protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193222728|emb|CAQ68731.1| cysteine ABC transporter, periplasmic binding component
           [Cupriavidus taiwanensis LMG 19424]
          Length = 273

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 77/246 (31%), Gaps = 13/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K    + L        + +  A +L  +K+ G LK G+      F    A  + +GFDV
Sbjct: 9   FKSLLAASLVAGAGLAATAAHAADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RA++  +   P    ++          LQ+ + D++    + T  R     L F   
Sbjct: 69  DVARAVAGKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVNVTPQR--QQVLDFSTP 123

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     I  K       S+  L G  + V  G+                     +   
Sbjct: 124 YVYSDAQLIQRKDDKRQFKSLEDLKGHKLGVSLGSNYNDLAKSVA-----GIDVKTYPGA 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      A R DA   D   + A  +               + + +A    + + ++  
Sbjct: 179 PEYLRDLAAQRVDAALNDR-LMVAYLVKTTNLPLRPGAIVAGATTQVAIPFRKDNPKFAQ 237

Query: 240 IVSWTH 245
            ++   
Sbjct: 238 AINHAL 243


>gi|209546622|ref|YP_002278540.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537866|gb|ACI57800.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 278

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 86/251 (34%), Gaps = 13/251 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
           +S+    +    +    A  L  I     L+C     +  FA       +  GFDVD C 
Sbjct: 6   LSLTVAFVGMAAAVPAKADQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCG 65

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +          P++ + R   ++  ++DI   N  +TL R   +   F    Y  
Sbjct: 66  AIAKELGVKAE---IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLA 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            +  I+         +  +G  +    G+T+E+++         K  P+ F+       A
Sbjct: 121 KEMLIVPADDAGKQKADYAGQRLASTKGSTSEMSI------KLNKSDPLTFQDTASAYLA 174

Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            +  +      +          +  +  E  ++ + +   P+   + +        ++  
Sbjct: 175 VQQGKARGMVANTMTTTKFVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPALTAKINEI 234

Query: 245 HYAMVTAEELG 255
            + +  + E+ 
Sbjct: 235 LHKLDASGEIN 245


>gi|317402646|gb|EFV83204.1| solute-binding protein [Achromobacter xylosoxidans C54]
          Length = 275

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 98/277 (35%), Gaps = 13/277 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M          + +    + + +A  L DIK RG   CG       F+          G+
Sbjct: 1   MKHWIITCAAAIGLAATLAPAAHADTLQDIKARGKFICGTMGTAEPFSFQDPKTRAIVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD C+A++ ++      ++   +  + R   L + ++D+++ N  W+  R   +  +  
Sbjct: 61  EVDMCQAVADSLG---VPLELKLIAVEARIPELIAGRVDVVAANLGWSPERAQQIDYSH- 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                  +       K + + + L+G  +    G+++E     +         P+ F+  
Sbjct: 117 QHFVSLQKVLARESDKDLKAPADLAGKRVSAVRGSSSEQGARKFIP----NVEPVTFKDP 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A +  +   + G    L  LK           IL   +   P    + +GDT   
Sbjct: 173 SGAFLALQQGKVSGFVGSELMLVKLKQQAASSAVPAKILEPALFVEPWGMGVRRGDTAML 232

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
           N V+     +   E  G   +  ++     T  +++R
Sbjct: 233 NQVNKVLDGL---EASGKATQIFDKWFGAGTPFNMKR 266


>gi|325293281|ref|YP_004279145.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3]
 gi|325061134|gb|ADY64825.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3]
          Length = 257

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 17/246 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++ + +  +   S +  A           +  G       F  ++A+G   GFD+D  +
Sbjct: 7   LLAAVSIAAISLFSGAALAQ--------DKIVIGTEGAYPPFNNLEADGTLTGFDIDIAK 58

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL   +    ++  ++  +      ALQ+K+ D +  +   T  R     + F    Y  
Sbjct: 59  ALCVEM---KAECTFVTNDWDGIIPALQAKKFDAIIASMSITPER--LQKVDFSKKYYNT 113

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                + K   I SV  L G S+  Q  TT       +F          ++   +E    
Sbjct: 114 PPAIAVPKDSPIKSVDDLKGKSLGAQGSTTHSNYAEKHFP----GSDLKMYPTADEYKLD 169

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               R DA   DI  L     ++      ++ P  +              +    ++   
Sbjct: 170 ISNGRIDAVIDDIVVLSEWLKSDAGKCCKILTPLPVDVEINGNGAGVAVRKGDTALADKF 229

Query: 246 YAMVTA 251
            A +  
Sbjct: 230 TAAIAG 235


>gi|62179452|ref|YP_215869.1| arginine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62127085|gb|AAX64788.1| ABC superfamily (bind_prot), arginine transport system [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322713921|gb|EFZ05492.1| arginine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 266

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 24  MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 71  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D     + +   + ++  +
Sbjct: 126 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMD----KHQEITTVPYDSYQ 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 181 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 240

Query: 239 NIVSWTH 245
              +   
Sbjct: 241 QKFNTAL 247


>gi|315613421|ref|ZP_07888329.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
 gi|315314417|gb|EFU62461.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
          Length = 270

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K   V    L  +   +  +    + S +  IK++G L    +     F     V    
Sbjct: 4   KKWILVVCSMLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        +S L+ A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N       +   +      A AI +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKK 234

Query: 233 GDTEWYNIVSWTHY 246
             ++   +V     
Sbjct: 235 EQSDLKAVVDKVIQ 248


>gi|260554424|ref|ZP_05826645.1| lysine-arginine-ornithine-histidine-binding periplasmic protein
           [Acinetobacter baumannii ATCC 19606]
 gi|260410966|gb|EEX04263.1| lysine-arginine-ornithine-histidine-binding periplasmic protein
           [Acinetobacter baumannii ATCC 19606]
          Length = 261

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 5   MKKIFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R     + F  
Sbjct: 56  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    + + + L G  + VQ GT  E     Y+    +    + +   
Sbjct: 111 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +          +          A  + + D
Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFAFAGGNVVDVKTLGVGAAIGLRKED 228

Query: 235 TEWYNIVSWTHYAMVT 250
            +    +     A++ 
Sbjct: 229 ADLKANIDKALAAIIA 244


>gi|222152802|ref|YP_002561979.1| extracellular amino acid-binding protein [Streptococcus uberis
           0140J]
 gi|222113615|emb|CAR41486.1| putative extracellular amino acid-binding protein [Streptococcus
           uberis 0140J]
          Length = 268

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 16/251 (6%)

Query: 2   YKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
            K    +I  + ++  T+ ST  +      I  +G L   ++     F            
Sbjct: 4   KKILKAAIGLMTLVSMTACSTENSKDTQDKIVDKGTLVVAVSPDYAPFEFQTLKDGKNTI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+   + ++  +     K++  P++      +LQS + DI      +T  R      
Sbjct: 64  VGADITLAQDIAKEL---KVKLKLSPMSFNNVLSSLQSGKADIAISGISYTKERSKV--Y 118

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      ++ K     ++S++ L+G  +  Q  +  E       K      H +
Sbjct: 119 DFSKSYYDTENAIVVKKDKLTSLTSMASLAGKKVGAQKSSIQENLAKTQLK----DSHIV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               + E+    +  + DA T D          N   +         +      A+ +G 
Sbjct: 175 SLTDMGEVVNELKNGQLDAITMDGPVATGYVAQNKDLAIVDYTFKTNNADAKVVAMPKGS 234

Query: 235 TEWYNIVSWTH 245
            +    ++   
Sbjct: 235 PKLQKTINKVV 245


>gi|319778834|ref|YP_004129747.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Taylorella equigenitalis MCE9]
 gi|317108858|gb|ADU91604.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Taylorella equigenitalis MCE9]
          Length = 260

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 17/245 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               +L   ++   +    A      K    L+ G  TG V F      G+  GFD++  
Sbjct: 1   MRSLLLTAGLVLGLASVVQA------KDFTELRIGTETGYVPFEYKNEKGELIGFDIEVG 54

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A+   +    +K  ++          LQ+++ DI+  +      RE    + F    Y 
Sbjct: 55  NAICEKL---KAKCTWVEQPFDALIPGLQARKFDIIHASITHNEAREKV--IDFTDDVYA 109

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                I  K  GI++   L G  +    G+  E                + ++   +   
Sbjct: 110 IPTQLIAKKGSGIATEDDLKGKRLGALQGSAQEAYARRVISKK--DVKVVSYKEQPQTFI 167

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS----PLAPAIIQGDTEWYNI 240
             +A R DA   +     +  +     +++  +   +        ++  I +GD +    
Sbjct: 168 DLKAGRIDAAIVEKPNANSAFIATPEGADYEFVGQPLEHELLNNRISIGIRKGDKDLKEA 227

Query: 241 VSWTH 245
           +    
Sbjct: 228 LDKAI 232


>gi|262278399|ref|ZP_06056184.1| histidine-binding periplasmic protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258750|gb|EEY77483.1| histidine-binding periplasmic protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 258

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 5   MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R     + F  
Sbjct: 56  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    + + + L G  + VQ GT  E     Y+         + +   
Sbjct: 111 KIYNTPTRMVAKKGSPLLPTAASLKGKRVGVQQGTIQETYAKTYWAPKG--VTVVPYPVQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +      +   +  +       A  + + D
Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFAFVGGNVVDAKTLGVGAAIGLRKED 228

Query: 235 TEWYNIVSWTHYAMVT 250
            +    +     A++ 
Sbjct: 229 ADLKANIDKALTAIIA 244


>gi|229028211|ref|ZP_04184351.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH1271]
 gi|228733085|gb|EEL83927.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH1271]
          Length = 264

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     LQSK+ D +  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKALVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|76798879|ref|ZP_00781087.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77406477|ref|ZP_00783532.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae H36B]
 gi|77409393|ref|ZP_00786092.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae COH1]
 gi|76585775|gb|EAO62325.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77172002|gb|EAO75172.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae COH1]
 gi|77174912|gb|EAO77726.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae H36B]
          Length = 301

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55
                  I  L ++  ++   +   +  I      +K   +  G +   V       +GD
Sbjct: 29  KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 88

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          +++ P+N   +   L +  ID++      T  R     
Sbjct: 89  YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 143

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           +AF      + Q  +      I+S+  + G  +  Q+G++         D  K       
Sbjct: 144 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 203

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + ++   +     + +R D    D                +  +              +
Sbjct: 204 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 263

Query: 233 GDTEWYNIVSWTHY 246
            D      ++    
Sbjct: 264 VDRRLIEKINKAFK 277


>gi|300934588|ref|ZP_07149844.1| putative extracellular solute-binding protein [Corynebacterium
           resistens DSM 45100]
          Length = 408

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 11/206 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           + +I KRG L  GI   L          G+  GF++D  R ++  IF+DP K+++  + +
Sbjct: 122 VAEIHKRGRLIVGIAQSLNRLGYRDPVTGELVGFEIDLAREIARDIFNDPEKVEFRYVES 181

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           + R  AL+  ++DI+SR    T  R       F           ++ +   I  V  L G
Sbjct: 182 RNREKALREGEVDIISRTMSITSAR--QQKTEFSSPYLTVRPRLLVPENSHIQHVGDLKG 239

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++C    +T+   L      +      +      +   A + H+ DA   D + L  L+
Sbjct: 240 KTVCATNDSTSASALR-----NYDLSKVLATRTWTDCLMALQRHQADAVYTDDAILSGLQ 294

Query: 206 LTNDRPSEHVILPDIISKSPLAPAII 231
             +       ++ D  +++     I 
Sbjct: 295 AQDPH---MKLVGDDFAENHYGVGIP 317


>gi|170679839|ref|YP_001743323.1| cystine transporter subunit [Escherichia coli SMS-3-5]
 gi|170517557|gb|ACB15735.1| cystine-binding periplasmic protein [Escherichia coli SMS-3-5]
          Length = 266

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  + L          +  +L  +K+RG L  G+      F+    +G   GF+V+F + 
Sbjct: 14  VMAVALGAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +       P        +L SK+ID++      +  R+      F       G
Sbjct: 74  LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128

Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              ++ K     + + + L G  + V  GT  E    ++ + +        ++       
Sbjct: 129 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R  R DA   D   L AL L         +  +  S+     A+ +G+ +    V+  
Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242

Query: 245 H 245
            
Sbjct: 243 I 243


>gi|212709681|ref|ZP_03317809.1| hypothetical protein PROVALCAL_00729 [Providencia alcalifaciens DSM
           30120]
 gi|212687492|gb|EEB47020.1| hypothetical protein PROVALCAL_00729 [Providencia alcalifaciens DSM
           30120]
          Length = 247

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 25/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  T+            ++  ++         F     N    GFD
Sbjct: 1   MKKLLLATLLGAVTLSATAA-----------EKETIRFATEATYAPFEMFDKNNQIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +   +   +      +L+ ++ + L    D T  R     + F  
Sbjct: 50  VDLANAMCAKM---NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITPER--QQQVDFTE 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   I++V QL G  I VQ GTT +  + +  K        + ++  +
Sbjct: 105 TYYPNSAEFIAVK-DKITAVDQLKGKKIGVQNGTTHQKYIMEQHK----DMTVVPYDNYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R +A  GD +            +   +   +         L  A+ +G+ E
Sbjct: 160 SAILDLQNGRINAVFGDTAVADEWLKAKGNENLAPVGDKVTDPQYFGIGLGIAVRKGNKE 219

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 220 LLDKMNKAL 228


>gi|163858459|ref|YP_001632757.1| solute-binding protein [Bordetella petrii DSM 12804]
 gi|163262187|emb|CAP44489.1| probable solute-binding protein [Bordetella petrii]
          Length = 284

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 97/256 (37%), Gaps = 12/256 (4%)

Query: 2   YKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           Y+     +L  I+L        +A+    IK RG + CG       +        ++ G+
Sbjct: 3   YRSIKTVVLGTILLSAVWGSQASANQWDTIKARGTIVCGTQNASSPYGFQDPVKREYVGY 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+A++  +     K+Q+ P++ + R   ++  ++D+++    W   R     + F 
Sbjct: 63  DVDMCKAIAKELG---LKLQHKPVSTEARIPEVKMGRVDMMAGAVAWLPKRAE--QVDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     ++    GI +++ L G  +C  +G+++               + + F+ +
Sbjct: 118 DQYLQGYIKVLVKADSGIKTLADLKGKKVCASSGSSSAAIAEKVL----QGANVLTFQNI 173

Query: 180 EEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +     ++ + +A T         L  +        +L +      +   + QG+    
Sbjct: 174 AQCYVGLQSGKVEAMTAGELVLRRFLNDSVKEGKPTALLDEPTYTEHIGIIVKQGEAALL 233

Query: 239 NIVSWTHYAMVTAEEL 254
             ++    A+  + EL
Sbjct: 234 AQINQAIAALDKSGEL 249


>gi|158426031|ref|YP_001527323.1| putative ABC transporter periplasmic solute-binding protein
           [Azorhizobium caulinodans ORS 571]
 gi|158332920|dbj|BAF90405.1| putative ABC transporter periplasmic solute-binding protein
           [Azorhizobium caulinodans ORS 571]
          Length = 271

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 81/235 (34%), Gaps = 10/235 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + +A  + DI  +  L  G+   L  F  + A G  +G+D D  + +   +  +   ++ 
Sbjct: 30  AASAQSIDDILSKKKLTIGMLVDLPPFGLLDAQGKPEGYDADVAKLMGKYLGVE---VEI 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+    R   L + ++D L      T  R   +   F           +  KK  + ++
Sbjct: 87  VPVTGPNRIPYLLTNKVDALVATFGITPERAKQVQ--FSIPYSAIEIQLLGPKKLDVKTL 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            Q  G  I V   +T +  L             + F+       A+ + + D    +   
Sbjct: 145 DQTVGKKIAVARASTQDTALTAAVPK---GATIMRFDDDATAAQAFISGQTDLLGSNNVI 201

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +L    P   +    ++        + +G T++   ++   Y +    EL 
Sbjct: 202 --GAQLAEANPDMGIERKIVLRSQYNGITVRRGSTDFLQWINTFLYFVKNNGELD 254


>gi|107026866|ref|YP_624377.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           cenocepacia AU 1054]
 gi|116691939|ref|YP_837472.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia HI2424]
 gi|170736067|ref|YP_001777327.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia MC0-3]
 gi|105896240|gb|ABF79404.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116649939|gb|ABK10579.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169818255|gb|ACA92837.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia MC0-3]
          Length = 260

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G     
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIGFT-TK 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I     +  +      + + + L G SI V+ GTT E     Y+       + + ++  +
Sbjct: 109 IYNQPTRLVVKKGSSLLPTAASLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQD 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
            + A   A R DA   D        L + R + +  +   +    +        + Q DT
Sbjct: 167 GVYADLIAGRLDAALQDEVQAAIGFLKSPRGANYTFVGPELVDEKVLGIGAGIGLRQEDT 226

Query: 236 EWYNIVSWTHYAMV 249
           +    +    + MV
Sbjct: 227 DLKAKIDRAIHDMV 240


>gi|228954440|ref|ZP_04116465.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228805097|gb|EEM51691.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 259

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N       K    L  G +     +  V+A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGEEKATGKSEKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVNF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      I  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVISKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|163857186|ref|YP_001631484.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella petrii DSM 12804]
 gi|163260914|emb|CAP43216.1| putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella petrii]
          Length = 260

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 75/254 (29%), Gaps = 14/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  L+ L   + +     L  IK  G  K G       F    A+G   GFD
Sbjct: 1   MKPLRSILLAGLLQLAVAAGAHAQDGLAAIKSAGVFKIGTEGTYAPFTYHDASGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +        ++          L  K+ D +      T  R+      F  
Sbjct: 61  VEIGEAIAQRLGVKAE---FVEGKWDGLIAGLDVKRYDAVINQVGITDARKA--KYDFSD 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I S + L G        T+    LA  + A       +  +  
Sbjct: 116 PYIASQAVLIVRDDNTDIKSFADLKGKRSA-NTLTSNFGKLAQKYGA-----QVVAVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWY 238
            E      + R DA   D  +    K         ++        S     I QG+ +  
Sbjct: 170 NESIDLLTSGRVDATINDNLSFLDFKKHKPNAKVKIVDSDKSAEFSESGVLIRQGNPQLR 229

Query: 239 NIVSWTHYAMVTAE 252
             ++    A + A+
Sbjct: 230 EAINKAL-ADIKAD 242


>gi|149019349|ref|ZP_01834711.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|147931219|gb|EDK82198.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae SP23-BS72]
          Length = 309

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 80/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +  + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|238897253|ref|YP_002922930.1| polar amino acid ABC transporter periplasmic amino acid-binding
           subunit [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465008|gb|ACQ66782.1| polar amino acid ABC transporter periplasmic amino acid-binding
           subunit [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 277

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 99/305 (32%), Gaps = 65/305 (21%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A  L DIKK G ++  +      F           G+DVD   A+  A   +   I+++ 
Sbjct: 23  ADKLNDIKKAGKIRVAVFDNNPPFGYYDPKTKKLIGYDVDIAHAIGKAFGVN---IEFVE 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            N   R   L+SK++D+++ N   T  R     + F    +  GQ FI  K   +     
Sbjct: 80  TNPANRIPLLKSKKVDLIAANFTITPERAK--EVDFSLPYFSTGQKFIAKKG-VLKKPDD 136

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L    I    GT  E+TL + + +       I ++   +   A R     A T D + L 
Sbjct: 137 LKSLRIGADKGTVQEITLRENYPSA----IVISYDDTPQAFMALRNENVQAITQDDAKLV 192

Query: 203 ALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            L        +    I    I+K     A  +G+    N ++                  
Sbjct: 193 GLMGNLKAEMKASFEISHFSITKEYQGIATAKGEKNLINAINTI---------------- 236

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
                           L ++K                  ++       +++R  G  ++ 
Sbjct: 237 ---------------LLKMEKEGE--------------AVK-------IYNRWFGPDTKT 260

Query: 321 KIPRG 325
             PRG
Sbjct: 261 AQPRG 265


>gi|322834312|ref|YP_004214339.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321169513|gb|ADW75212.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 272

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 75/250 (30%), Gaps = 12/250 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           FV +  L    F++ S   + L  + + G L+  I      F  +  N    GFDVD  +
Sbjct: 5   FVVVTLLAATLFSAASFAGATLDRVTQTGVLRNAIVNDYPPFGFIDDNNQLAGFDVDVAK 64

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +      I                 + D    +      R   L     P     
Sbjct: 65  AVAQRMGVKLEIIAPGWETIVGGK---WQGRWDTCICSMTPNTERAKVLDFP-TPYYNSP 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-------R 178
               +  K   I S + LS   I V  G+T E  L         K     F+        
Sbjct: 121 AVLVVNKKDDRIKSAADLSNKKIGVGIGSTYETYLQKTLVIPGSKPITFPFDNVHVIPSD 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E               G +S L        R     I+ ++    P   A  +GD EW 
Sbjct: 181 EEVAFQNLALGPGVRLDGVVSDLATANARIKRAPVFKIVTELY-AEPNWVATDKGDAEWD 239

Query: 239 NIVSWTHYAM 248
             V+ T  ++
Sbjct: 240 KKVADTIKSL 249


>gi|261340318|ref|ZP_05968176.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288317409|gb|EFC56347.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 266

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+           ++L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I S + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKSAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +   +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    +    
Sbjct: 230 KGNDDLLKAIDGAI 243


>gi|123442312|ref|YP_001006291.1| amino acid-binding periplasmic protein precursor [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089273|emb|CAL12120.1| amino acid-binding periplasmic protein precursor [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 257

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F      L+     S    A  +  I        G++ G   F  +  +G+  GFD
Sbjct: 1   MKKTF----AALLTGLILSAPVAAQTIETI------SFGVDGGYPPFDVLAPSGEITGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  ++    +    AL +++ D +  +   T  R+    + F  
Sbjct: 51  IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTD 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   +   V+ L+G ++ VQ G+  E     ++         + +   
Sbjct: 106 RYYRSAAQLVARKGSPLSPDVASLTGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D     +  +   R  +      +I    +      A+ + + 
Sbjct: 164 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDDTISSDVGIAVGKDNP 223

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 224 ALRDALNGAIKAI 236


>gi|187732473|ref|YP_001881001.1| glutamine ABC transporter periplasmic protein [Shigella boydii CDC
           3083-94]
 gi|187429465|gb|ACD08739.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Shigella boydii CDC 3083-94]
          Length = 248

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L ++F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSVLKVSLAALTLVFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + D +       A  +G  E  +
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGCDELRD 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|315650535|ref|ZP_07903601.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
 gi|315487190|gb|EFU77506.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
          Length = 275

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 85/269 (31%), Gaps = 38/269 (14%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASI---------------------LGDIK--KRGFL 36
           M K    ++++ L+     +    +                          IK  + G L
Sbjct: 1   MKKKILTIALVGLMAASLAACGKASETQTSNAASESASDGKAESKSDGTAKIKTVEAGKL 60

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               N     +     +    G D+D   A++  +     ++Q   +      L + S +
Sbjct: 61  TLATNAEFPPYEYHDGD-KIVGIDMDIADAIAKKLG---LEVQIEDIAFDSVILEVTSGK 116

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            DI       T  R+    + F        Q  I+     I     L G ++ VQ GTT 
Sbjct: 117 ADIGLAGISATDERK--QSVDFSDTYTTSKQLIIVKDDSPIKGSKDLEGKTVGVQTGTTG 174

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           ++  +D          P  +++  +   A    + DA   D       K   +  S   +
Sbjct: 175 DILASDI-----KDVKPERYDKGMDAVQALSQGKVDAVIID---SEVAKKFVEETSGLKV 226

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L +  +    A AI +G+ E  + V+   
Sbjct: 227 LDEAFADENYAIAIKKGNKELLDSVNKAL 255


>gi|167463723|ref|ZP_02328812.1| cystine transporter subunit [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322383354|ref|ZP_08057144.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321152354|gb|EFX45170.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 288

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 77/225 (34%), Gaps = 8/225 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           N+  L  IK+ G LK GI      +  +    +  GFD D  + ++  +        ++ 
Sbjct: 48  NSRTLEQIKQSGVLKVGIMGIYAPYNFLNDKKEMDGFDADIAKEIAKKMGLKAE---FVS 104

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVS 141
                    LQ+ + D +      T   +    + F      +  +  +      I+ + 
Sbjct: 105 QEFSGMIAGLQAGKFDTVISQMTITE--DRQKQMDFTEPYITNQVKVIVKQDNNSITKLE 162

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
              G +I V  GT  E  L +        +    ++ V          R DA   ++ AL
Sbjct: 163 DFKGKNIGVGLGTNDEAYLRNEALPKVGNFTIKTYDDVITSLQDLNNGRIDATINNMYAL 222

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +        +  ++ + +     A A+ +G+TE  + ++    
Sbjct: 223 KPI--VEKNGFKIKVVGEAVKSDKAAIAVTKGNTELRDALNQALK 265


>gi|260769397|ref|ZP_05878330.1| hypothetical protein VFA_002455 [Vibrio furnissii CIP 102972]
 gi|260614735|gb|EEX39921.1| hypothetical protein VFA_002455 [Vibrio furnissii CIP 102972]
 gi|315181928|gb|ADT88841.1| hypothetical binding protein component ofABC transporter [Vibrio
           furnissii NCTC 11218]
          Length = 269

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 78/245 (31%), Gaps = 7/245 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        +   +L       + S L ++   G LK   + G + F     +G + GFD
Sbjct: 5   MKSTAAGLAVACSLLGANQAMASESALENVLNTGELKVCFDAGYMPFEMKTKDGRYIGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++ ++    + +            A+ + + DI+      T  R + +  A   
Sbjct: 65  IDLGKHMARSMGVKFTPVN---TAWDGIIPAMLTGKCDIIMGGMTVTAERNLKVNFATPY 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I            +  + S   L+     +     T     +  K +       +++   
Sbjct: 122 IVIGQSVVLSPKLEGKVKSYKDLNDPKYTIATKLGTTGV--EAAKKYVPNAKLDLYDTEV 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        + DA+  D          N+    H  L +  +  PL  AI Q D  + N 
Sbjct: 180 DAVLQVVNGKADAFVYDFPYNAIYSAQNEGKVVH--LAEPFTYEPLGWAIRQNDPNFLNF 237

Query: 241 VSWTH 245
           +    
Sbjct: 238 LDNYL 242


>gi|251789976|ref|YP_003004697.1| cationic amino acid ABC transporter periplasmic binding protein
           [Dickeya zeae Ech1591]
 gi|247538597|gb|ACT07218.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya zeae Ech1591]
          Length = 243

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 81/248 (32%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  ++     + F++ +              ++         F  V AN    GFD
Sbjct: 1   MKKLFIAALF--GSVSFSAGAAE-----------TIRFATEASYPPFESVDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   I    +   +           L+ ++ D +    D T  R     ++F  
Sbjct: 48  IDLANALCKQI---QATCTFSNQAFDSLIPGLKFRRYDAVIAGMDITPER--QQQVSFSQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L G  + VQ GTT +  L D     +     + ++  +
Sbjct: 103 PYYENSALFIAQK-DKLTDVAALKGKRVGVQNGTTHQKFLLD----KHQDITVVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N       + +         L  A+ Q + E  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNDWLKQNPNLASVGNKVTDKDYFGIGLGIAVRQNNDELV 217

Query: 239 NIVSWTHY 246
              +    
Sbjct: 218 KKFNDALN 225


>gi|170691906|ref|ZP_02883070.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia graminis C4D1M]
 gi|170143190|gb|EDT11354.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia graminis C4D1M]
          Length = 258

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 86/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L ++   + +         K+   ++ G++     F    A+G   GFD
Sbjct: 1   MKK--LALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAASGQVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL + +     K  ++  +      AL+ K+ D +  +   T  R     + F  
Sbjct: 50  VDVTKALCARM---NVKCVWVEQDFDGIIPALKGKKFDAIVSSLTITDKR--REQIDFSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I       + +   L G  + V+ GTT E     Y++        + ++  
Sbjct: 105 KLFDAPARMIAKAGSPLLPTAESLKGKRVGVEQGTTQEAYAKAYWEPKG--VTVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234
           +++ A   + R DA   D     A  L   R        P++          A  + + D
Sbjct: 163 DQVYADLTSGRLDAALQDEIQADAGFLKTPRGKGFAWAGPEVKDPKTIGEGTAIGLRKDD 222

Query: 235 TEWYNIVSWTH 245
            E   + +   
Sbjct: 223 AELKAMFNKAL 233


>gi|120406518|ref|YP_956347.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119959336|gb|ABM16341.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 503

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 77/233 (33%), Gaps = 15/233 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
           +   +++L  I +  T+  ++ S    ++  G L+ G       F+      G   G+DV
Sbjct: 21  RTVLLAVLAAIAVLLTACGSSGSG-NPVESSGVLRVGTEGVYAPFSYHDPATGQLTGYDV 79

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RA+   +  +   ++++       F AL++ + D+++     T  R           
Sbjct: 80  DVARAVGEKLGVN---VEFVETPWDSIFAALEANRFDVVANQVTITPER--QQKYDLSEP 134

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   +       I+S++ L G     Q+ T+    +A    A          E + 
Sbjct: 135 YSIGEGVIVTRADDDSITSLADLRGKR-AAQSTTSNWAGVARDAGA-----QIESVEGLT 188

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  A     R D    D S      L     +   I      KS    A  + 
Sbjct: 189 QAMALLSQGRVDVVVND-SLSIYAYLAETNDTAVKIAGATGEKSEQGFAARKN 240


>gi|323526373|ref|YP_004228526.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323383375|gb|ADX55466.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 255

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 89/256 (34%), Gaps = 26/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F  ++LC+  L  ++ + +            L+ G+      F     +G+  GFD
Sbjct: 1   MKQLFASTVLCM--LATSACAAD-----------TLRFGVEADYPPFEYKLPSGELAGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +     K +++  +      AL++++ D ++     T  RE    + F  
Sbjct: 48  IDIGNAICAKL---QVKCRWVENSFDGLIPALEARKFDAINSAMWATEQREK--AIDFTS 102

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      +      I  +   L G  I VQ G T +      +         I +   
Sbjct: 103 VIYASPIRLVARTGSHILPNAESLKGKRIGVQQGGTQQYYAEQKWAPAG--AVVITYSSQ 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            ++ +   A R DA      +     L      +   + + ++   +     A  + + D
Sbjct: 161 TQVFSDLAAGRVDAALQSQQSAEDSFLKKPEGKDFAFVGEPLTDEKIFGRGVAFGVRKQD 220

Query: 235 TEWYNIVSWTHYAMVT 250
            E    ++    A+  
Sbjct: 221 PELKARLNEAIAALKQ 236


>gi|253574817|ref|ZP_04852157.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845863|gb|EES73871.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 296

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 8/234 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +S +T + +L +IK  G +K G+      +  +  N +  GFD D  + ++  +    
Sbjct: 49  GGSSANTGSDLLNEIKTAGVIKVGLMGTYAPYNFLNENKEIDGFDADVAKEVAKRLGVK- 107

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KK 134
             +++ P        +LQ+ +ID +      T  R+    + F      +    I+    
Sbjct: 108 --VEFAPQEFSGLIPSLQAGKIDAIISQVTITDERK--QQIDFTQPYITNEVKIIVKEDN 163

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+ +    G +I V  GT  E  L +        +    ++ V        A R DA 
Sbjct: 164 DSITKLEDFKGKNIGVGLGTNDESYLRNDVLPQVGNFEIKTYDDVITSLQDLNAGRIDAT 223

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +        + +    +   + D I       AI + + E+   +      M
Sbjct: 224 INN--LYALKPIVDKNGYKIKAVGDAIKSDQAGIAIRKNNPEFLAALDQALTDM 275


>gi|257790887|ref|YP_003181493.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
 gi|325832074|ref|ZP_08165171.1| major cell-binding factor [Eggerthella sp. HGA1]
 gi|257474784|gb|ACV55104.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
 gi|325486395|gb|EGC88847.1| major cell-binding factor [Eggerthella sp. HGA1]
          Length = 274

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 81/247 (32%), Gaps = 8/247 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
           +  F+    L+            + G       L+ G    + GF       G+ +G +V
Sbjct: 4   RRTFIRSSALVASTLVLGGATGGLAGCAGGADVLRVGTKIDVPGFGFQNPETGNIEGMEV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R L+  I   P  ++   +N   R   L +  +D        T  R+      F   
Sbjct: 64  DIARELAKRIKGSPDALRVTGVNVTTRGAMLDNGTLDATLATFTITEARKK--SYNFSRP 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y D  G ++ K  GI  +  L G ++ V    TT   L        +      +    E
Sbjct: 122 YYTDHIGVLVKKSSGIVDLKDLDGKTVGVALSATTRDKLTAAGDEIGIHMSFAEYSTYPE 181

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           I  A    R DA++ D S L             ++L    +      A  + +TE  + V
Sbjct: 182 IKIALVTGRVDAFSVDRSILNGYV-----DDSTMLLDAQFAPQEYGVATKKSNTELADQV 236

Query: 242 SWTHYAM 248
                AM
Sbjct: 237 DAAIGAM 243


>gi|194397488|ref|YP_002038042.1| ABC transporter amino acid-binding protein [Streptococcus
           pneumoniae G54]
 gi|194357155|gb|ACF55603.1| ABC transporter, amino acid-binding protein [Streptococcus
           pneumoniae G54]
          Length = 271

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 79/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L          F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATXPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q  T  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKXTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|15612733|ref|NP_241036.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus
           halodurans C-125]
 gi|10172782|dbj|BAB03889.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus
           halodurans C-125]
          Length = 275

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 77/269 (28%), Gaps = 31/269 (11%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNA-----------------SILGDIKKRGFLKCGINT 42
           M K    V++         +                      S+L  ++  G L  G   
Sbjct: 1   MKKILSMVALFFAFTTVLAACGAADQNNEETAGEEEAAEASDSLLAKVQAEGKLLIGTEG 60

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               F     +G+  GFDV+  R ++  +  +     ++       F  L +++ D+++ 
Sbjct: 61  TYPPFTFHDESGELTGFDVELAREVADRLGVEAD---FMETQWDAMFAGLDAERFDMIAN 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLA 161
                   +      F           + H     I+S   + G     Q+ T+    LA
Sbjct: 118 QVGI--REDRLEKYDFSDHYITSTAVVVTHEDNDEINSFEDIEGKKSA-QSLTSNYADLA 174

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             + A       +  +   +      + R D    D  ++              ++ +  
Sbjct: 175 REYNA-----EIVGVDGFNQAIELLNSKRVDVTINDNLSVLDFLNNRPNAP-IKMVAEHE 228

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +       +G+ E    V+     ++ 
Sbjct: 229 DAAQSGFMFRKGNEELVEAVNEALAEIIE 257


>gi|157145288|ref|YP_001452607.1| cystine transporter subunit [Citrobacter koseri ATCC BAA-895]
 gi|157082493|gb|ABV12171.1| hypothetical protein CKO_01025 [Citrobacter koseri ATCC BAA-895]
          Length = 273

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 8   MKLALLGRQALMGVMAVALVAGMSVKSYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 67

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 68  GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I++ + L G  + V  GT  E    ++ + +    
Sbjct: 124 -KYDFSTPYTISGIQALVKKGNEGSINTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 178

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  +  S+     A+ 
Sbjct: 179 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQEAGVALR 236

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 237 KGNEDLLKAVDGAI 250


>gi|163938358|ref|YP_001643242.1| extracellular solute-binding protein [Bacillus weihenstephanensis
           KBAB4]
 gi|229131356|ref|ZP_04260256.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BDRD-ST196]
 gi|229170388|ref|ZP_04298061.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH621]
 gi|163860555|gb|ABY41614.1| extracellular solute-binding protein family 3 [Bacillus
           weihenstephanensis KBAB4]
 gi|228613085|gb|EEK70237.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH621]
 gi|228652100|gb|EEL08037.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BDRD-ST196]
          Length = 264

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     LQSK+ D +  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|322834152|ref|YP_004214179.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rahnella sp. Y9602]
 gi|321169353|gb|ADW75052.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rahnella sp. Y9602]
          Length = 259

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 87/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L +  L  TS   +A           L+ G++     F     +G   GFD
Sbjct: 1   MNK---IPLLIIAALSATSGLAHAET--------TLRFGVDPSFPPFESKAPDGKLVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+         K +++         AL +K+ D +      T  R+    + F  
Sbjct: 50  IDLGNAICQQA---KVKCEWVETAYDGIIPALNAKKFDAVLSAMSMTPKRKT--QVTFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      I  K  G+   +  L G ++ V  GTT E      ++   +    + ++  
Sbjct: 105 MLYHVPSVLIAKKGSGLQPTADSLKGKTVGVAQGTTQEAYAQGEWQKKGVD--VVSYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + ++    + R D    + +A     L     + +    + ++ +       A  + + D
Sbjct: 163 DFVNQDLASGRIDVTLTNAAAAETGFLKTPEGTGYAFAGEPLNDTRYLGEGTAIGLRKDD 222

Query: 235 TEWYNIVSWTH 245
                +++   
Sbjct: 223 QAHLTLINNAL 233


>gi|297531645|ref|YP_003672920.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           C56-T3]
 gi|297254897|gb|ADI28343.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           C56-T3]
          Length = 272

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 68/224 (30%), Gaps = 11/224 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +  +  G +     F  +   G   GFDVD   A+      D        +     F +
Sbjct: 40  AKKKIVVGTDAAFAPFEYMD-KGKIVGFDVDLLDAIMKEAGLDYE---LRNIGWDPLFAS 95

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQSK++D+       T  R+      F    +   Q  ++ +   + +   L G +I VQ
Sbjct: 96  LQSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQ 153

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             TT +      F       H   FE              DA   D +        N   
Sbjct: 154 NATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNK 210

Query: 212 SEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
              VI  P   +         + ++E    V      ++ + + 
Sbjct: 211 KLQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 253


>gi|269139576|ref|YP_003296277.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Edwardsiella tarda EIB202]
 gi|267985237|gb|ACY85066.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Edwardsiella tarda EIB202]
 gi|304559464|gb|ADM42128.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Edwardsiella tarda FL6-60]
          Length = 256

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I +  T+                ++         F  + A    +GFD
Sbjct: 14  MKKIIIAAMLAGISVSATAAQ-------------TIRFAAEASYPPFEFMDAQNKMQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +   +      +L+ K++D +    D T  R+    + F  
Sbjct: 61  VDLANAICQQM---KATCTFSNQSFDSLIPSLKFKRVDAVISGMDITPERQK--QVDFSQ 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L G  + +Q GTT +  L D          P+ ++  +
Sbjct: 116 PYYDNSALFIAEKG-KVADVAALKGKRVGIQNGTTHQKYLMDKHPE----LTPVPYDSYQ 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N    P    +       + L  A+ +G+    
Sbjct: 171 NAILDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLL 230

Query: 239 NIVSWTHY 246
              +    
Sbjct: 231 EQFNAALN 238


>gi|229171201|ref|ZP_04298794.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           MM3]
 gi|228612281|gb|EEK69510.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           MM3]
          Length = 264

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     LQSK+ D +  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VKKVNKALDEII 239


>gi|317048961|ref|YP_004116609.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Pantoea sp. At-9b]
 gi|316950578|gb|ADU70053.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. At-9b]
          Length = 260

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 80/254 (31%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    S                L+ G +     F    A G   GFD
Sbjct: 1   MKKRVLALSLMLAMSSAASVFAAVP--------HTLRIGTDPTYPPFESKNAQGQLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I    +K  Y+  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLANEICKRI---KTKCTYVESDFDALIPSLKAKKIDAIISSLSITEKRQEEIA--FSE 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   I  ++  L G +I +  GTT E    +Y++   +   P  +   
Sbjct: 108 KLYAANARLVAPKGSTIQPTIESLKGKNIGLLQGTTQETYANEYWRPKGVTVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D        L       +      +    +        + + D
Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPAVKDDKIFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWTHYAM 248
            +    +     AM
Sbjct: 226 ADLKAAIDKAFDAM 239


>gi|168231389|ref|ZP_02656447.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194469197|ref|ZP_03075181.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194455561|gb|EDX44400.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205334246|gb|EDZ21010.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 246

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  + +   S S              L  G +     +  V A+    GFD
Sbjct: 1   MKKKLIVMLLASLSVHAASLSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  +   +      +L+ K+ D +    D T  RE    ++F  
Sbjct: 50  IDVANAVCKEM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K    + + L G  + ++ GTT +  L D          P+ ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 + +R +   GD   + A+        ++ I+ +  S           A+ +G+ 
Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 218 ALLQEINAALDKVKASPEYA 237


>gi|113866798|ref|YP_725287.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113525574|emb|CAJ91919.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 273

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +  A +L  +K+ G LK G+      F    A  + +GFDVD  RA++  +   P   
Sbjct: 26  TAAQAADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDVDVARAVAGKLGVKPE-- 83

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136
            ++          LQ+ + D++    + T  R     L F     +     I  K     
Sbjct: 84  -FVTTEWSGIIAGLQAGKFDVIVNQVNVTPQR--QQVLDFSTPYVYSDAQLIQRKDDKRQ 140

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             S+  L G  + V  G+                     +    E      A R DA   
Sbjct: 141 FKSLEDLKGHKLGVSLGSNFND-----LAKSVPGIDVKTYPGAPEYLRDLAAQRVDAALN 195

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D   + A  +               + + +A    + + ++   ++   
Sbjct: 196 DR-LMVAYLVKTANLPLRPGAIVAGATTQVAIPFRKDNPKFAQAINHAL 243


>gi|111018890|ref|YP_701862.1| ABC amino acid transporter, periplasmic binding protein
           [Rhodococcus jostii RHA1]
 gi|110818420|gb|ABG93704.1| ABC amino acid transporter, periplasmic binding protein
           [Rhodococcus jostii RHA1]
          Length = 262

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 81/237 (34%), Gaps = 16/237 (6%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +++L  + L     S +  ++  +++ G LK G       F+    +G   
Sbjct: 1   MRRTLPAVLITVLTALSLAGCGNSDSGPVIDQVREAGVLKVGTEGTYTPFSYQGPDGQLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DVD  RA+   +      +++        F  L++K+ D+++        R  +    
Sbjct: 61  GYDVDVIRAVGDKLG---VSVEFTQTPWDSIFAGLEAKRYDLVANQVTVNDER--TQKYD 115

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                 +     +       I+S++ L+G +   Q+ T+    +A    A+         
Sbjct: 116 LSTPYTYSEGVIVTRADDNSITSLADLNGKTTA-QSATSNWAQVARDAGAN-----VESV 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           E   +     +  R DA   D     A        +   +  +    S  A A  + 
Sbjct: 170 EGFVQAITLLKDGRVDATVNDN-LAVAEYQKQTSDTGVKVAAETGDTSEQAFAARKD 225


>gi|52144879|ref|YP_081948.1| amino acid ABC transporter, substrate-binding protein [Bacillus
           cereus E33L]
 gi|51978348|gb|AAU19898.1| amino acid ABC transporter, substrate-binding protein [Bacillus
           cereus E33L]
          Length = 264

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +               ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVT------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|16125690|ref|NP_420254.1| cystine transporter subunit [Caulobacter crescentus CB15]
 gi|13422806|gb|AAK23422.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Caulobacter crescentus CB15]
          Length = 261

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 78/228 (34%), Gaps = 14/228 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             AS    IK  G L+ G+      F     +G   GF+VDF +AL+  +        + 
Sbjct: 27  AGASGWDRIKASGKLRVGLEGTYPPFNFQDKSGQLAGFEVDFAKALAEQLGVKAE---FS 83

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P        +L+S +ID++      T  R+      F       G   I  K K   +  
Sbjct: 84  PAPFAGLLGSLESGRIDVVINQITITPDRQA--KYDFSEPYTVSGIQIIALKGKPAPTGP 141

Query: 142 Q-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G  + V  GT  E  L    +A+        ++         RA R DA   D   
Sbjct: 142 EGLTGKKVGVGLGTNYEQWL----RANVPTADVRTYDDDPTKYQDLRAGRIDAVLNDRLV 197

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 T+    E V      +      A+ + D     +++    A+
Sbjct: 198 AADFVKTSP---EFVASGQPFAAQGSGVAMQK-DPALKVVINQAINAL 241


>gi|15889178|ref|NP_354859.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156996|gb|AAK87644.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 257

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 21/254 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++ + +  +   S +  A           +  G       F  ++A+G   GFD+D  +
Sbjct: 7   LLAAVSIAAISLLSGAALAQ--------DKIVIGTEGAYPPFNNLEADGTLTGFDIDIAK 58

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL   +    ++  ++  +      ALQ+K+ D +  +   T  R     + F    Y  
Sbjct: 59  ALCEQM---KAECTFVTNDWDGIIPALQAKKFDAIIASMSITPER--LQKVDFSKKYYNT 113

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                + K   I S+  L G S+  Q  TT       +F          ++   +E    
Sbjct: 114 PPAIAVPKDSPIKSIDDLKGKSLGAQGSTTHSNYAEKHFP----DADVKMYPTADEYKLD 169

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIV 241
               R DA   DI  L     T+      ++ P  +           A+ +GDT   +  
Sbjct: 170 IANGRIDAVIDDIVVLSEWLKTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKF 229

Query: 242 SWTHYAMVTAEELG 255
           +     +  + +  
Sbjct: 230 TAAIAGIRASGKYQ 243


>gi|311031015|ref|ZP_07709105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           sp. m3-13]
          Length = 263

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 18/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKAN-- 53
           M K F  S++ ++++   S    +    +    G      L  G +     F  +     
Sbjct: 1   MKKWFLYSLISILVVGLLSACGTSGNGDETSGEGEDGKKVLVMGTSADYPPFEYIDTEVG 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFDVD  +A++  +  +   ++   ++      A++S  ID++      T  R   
Sbjct: 61  EEIIGFDVDLAKAITEELGYE---LKVQDMDFGSLITAMKSGNIDLILAGMTPTEERAE- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F  + Y      +  K   I+S+  L G ++ VQ G+       +  +  N+    
Sbjct: 117 -QVDFTNVYYTANHMIVSLKDSNITSLEDLVGKTVGVQMGSIQYDKAEEIAEEVNITIEN 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +R+ +I    +  R DA   + + +       ++  +         +   A A+ +G
Sbjct: 176 R--DRIPQIVQDLKTGRFDAAIIEDTVMKGF---MEKDEDLTGFTLESDEEGSAIALPKG 230

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
            +E     +     M    E+ 
Sbjct: 231 -SELTEEFNRVLKEMEENGEME 251


>gi|168491297|ref|ZP_02715440.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC0288-04]
 gi|221232134|ref|YP_002511287.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|183574399|gb|EDT94927.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae CDC0288-04]
 gi|220674595|emb|CAR69158.1| putative extracellular amino acid-binding protein [Streptococcus
           pneumoniae ATCC 700669]
          Length = 271

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 80/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +  + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|21221120|ref|NP_626899.1| sugar-binding protein [Streptomyces coelicolor A3(2)]
 gi|20520796|emb|CAB71196.2| putative sugar-binding protein [Streptomyces coelicolor A3(2)]
          Length = 352

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%)

Query: 16  FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67
                  +   +  I+ R      L  G++     +     N     + +GFD+D    +
Sbjct: 76  TLAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRI 135

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  D   +Q+  +   +R  A+Q  ++D++ R        +    +AF    +  GQ
Sbjct: 136 AKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQ 193

Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183
             +  K   I+     L+G  IC  AG+T   TL    K   +              +  
Sbjct: 194 QVLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCL 253

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +   +    +       +  D  +      A+ +   +    V+ 
Sbjct: 254 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGDAFTTEYYGVAMKKDADDLVRRVNR 310

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
                  A+     Q +  +   +T +   +  
Sbjct: 311 VLEQW-RADRADGWQHSYEEWLSETMDDPAKSL 342


>gi|293609591|ref|ZP_06691893.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828043|gb|EFF86406.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 257

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 1   MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 52  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAKQIA--FSS 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   + S +  L G  + VQ GT  E     Y+         + +   
Sbjct: 107 KIYNTPTRMVAKKGSPLLSTAASLKGKRVGVQQGTIQETYAKTYWAPKG--VTVVPYPVQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +          +  +       A  + + D
Sbjct: 165 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDAKTLGVGAAIGLRKED 224

Query: 235 TEWYNIVSWTHYAMVT 250
            +    ++    A++ 
Sbjct: 225 ADLKANINKALAAIIA 240


>gi|257461486|ref|ZP_05626582.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441209|gb|EEV16356.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 268

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 18/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K          IL   + S  A+ L +I++ G ++ G+      F++   +G ++GF+
Sbjct: 1   MKKIIL------GILLLFTSSVVANTLSEIRQSGSVRVGVFEAQPPFSKF-EDGKFQGFE 53

Query: 61  VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           V    ALS  IF     K++++P+ A ER   L+  ++D++      T  R     + F 
Sbjct: 54  VTLAEALSKDIFGGKAGKVEFVPVKASERLKVLEENKVDMVLATFTITNER--KQLVDFT 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    G +      I +VS L G  I  + GTT E             +  I     
Sbjct: 112 TPYFAVNIGVLTRAGDRIKTVSDLHGKPIIAETGTTGEAYFR------KEGFEIINCATA 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E     +  +   Y  D   + A  +        V + ++     L  A+ +G+ +   
Sbjct: 166 NECYKMLKDGKGIGYATDNLIVLAYAVI--DSDTEVNIKNLGVSDFLGIAVSKGNKDLLE 223

Query: 240 IVSWTH 245
            ++   
Sbjct: 224 FLNGEL 229


>gi|15807591|ref|NP_296329.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
 gi|6460438|gb|AAF12147.1|AE002090_3 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
          Length = 253

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 16/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS L L +L F + +     L  IKK G L          F   +      GF+
Sbjct: 1   MKLKS-VSTLALAMLAFGAPAAARD-LTSIKKSGTLVVATEPTYPPFTYTQGK-KIVGFE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L+  +      +++   +     + L   + D++  +   T  R+    + F  
Sbjct: 58  AELAELLAKQLGVK---VEWKSSSFDTLLIGLGQGRYDMVIASHGITPERQK--AVDFSN 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++   G ++ K  G  +++ + G  + VQ GTT     A   ++     +   +    
Sbjct: 113 P-HYCSGGVLVSKPGGPKTLADMKGKKLAVQLGTTY----ATRARSLPGLGNIQTYPNNT 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DAY  D       +       +   L   + +  +  A  + +    + 
Sbjct: 168 DALQALMAGRTDAYLTDRFVALEARKKTGGKLQIGAL---VFQEKIGIAFQKDNKSLTSA 224

Query: 241 VSWTHY 246
           V+    
Sbjct: 225 VNAALK 230


>gi|302522281|ref|ZP_07274623.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78]
 gi|318060994|ref|ZP_07979715.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actG]
 gi|318077284|ref|ZP_07984616.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actF]
 gi|302431176|gb|EFL02992.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78]
          Length = 280

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGD 55
           M      + + +++    + S       D           +  GI     G  +   +G 
Sbjct: 1   MKFRKVSAAVAVVLTVGLAASACGKNDDDKASGGSGGGKKITIGIKFDQPGLGQKLPSGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFDVD    ++ A+    ++I +    + +R   L+   +D ++ +   T  RE    
Sbjct: 61  FAGFDVDVATYVAKALGYKTNQIVWKEAKSADRETMLERGDVDFIAASYSITDEREA--K 118

Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F        Q  ++   +  I+    L+   +C   G+T+   +    K    K    
Sbjct: 119 VDFAGPYLLAHQDILVRSDEKEINDPKDLNSKRLCSVTGSTSAQNIK---KELAPKAQLQ 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E          DA T D S L       +   +  +    ++       + +G 
Sbjct: 176 EYGGYSECLTGLENKAVDALTTDDSILAGYAAQKEFQGKFKLAGFKMTNENYGIGVKKG- 234

Query: 235 TEWYNIVSWTHYAMV 249
           ++  + ++     MV
Sbjct: 235 SDLKDKINDALKKMV 249


>gi|239833266|ref|ZP_04681594.1| Histidine-binding protein precursor [Ochrobactrum intermedium LMG
           3301]
 gi|239821329|gb|EEQ92898.1| Histidine-binding protein precursor [Ochrobactrum intermedium LMG
           3301]
          Length = 270

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 83/255 (32%), Gaps = 9/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F V  +   +L        A    DI     ++   +  +     + AN    G D
Sbjct: 6   MLKRFLVLSIVGAMLTAQGVPAMADTYADIIAAKKIRVSTDLAIPPSGMLDANLKPVGSD 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + L+        +++++      R   LQ+ + DI+      T  R  +  + F  
Sbjct: 66  VETAQLLAKD---WGVELEFIQTTGATRIPNLQTNKADIVISTLSVTPER--AQVIDFSK 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                        K  I+  + L G S+ V  GTT +  L      H        ++   
Sbjct: 121 PYAGLVSVIAAPAKSPINDWADLKGQSVTVTRGTTQDSELTKLAGEHGF--TVTRYDDDA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  A  + +  A     +     ++ +  P+        I    LA  + + + E  + 
Sbjct: 179 TMVTAAVSGQAKAIATSATL--VKQIHDKNPTLAFEPKITIRVLNLAIGVNKNEPELLSK 236

Query: 241 VSWTHYAMVTAEELG 255
           +     A +   +L 
Sbjct: 237 LDEWVVANLQNGKLN 251


>gi|228957268|ref|ZP_04119034.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802459|gb|EEM49310.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 265

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G         +     AD  K +    
Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLKGA----QSLMSNYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|307068048|ref|YP_003877014.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|306409585|gb|ADM85012.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
          Length = 271

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVEVIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|257459777|ref|ZP_05624886.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257443202|gb|EEV18336.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 267

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 93/236 (39%), Gaps = 11/236 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+ +        A  L  I+ +G ++ G+  G   F+E+  +G ++GF+V   +A+++ 
Sbjct: 3   LLLAMLLPFIVAFADSLEQIRSKGVVRIGVYDGQPPFSELN-DGTFEGFEVTMAQAIAND 61

Query: 71  IFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           +F +   +I+ +P+  ++R  AL + ++DI+      T  R  +  + F    +    G 
Sbjct: 62  LFGEKGGRIELVPMKVEDRIPALVNNRVDIVIATITITPER--AQQIDFSTPYFSVNLGV 119

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +  K   I S++ L    I +++G T E         +             E     +  
Sbjct: 120 LTRKADRIKSLADLREKRILLESGGTGEAFFKQEGFGNFTFCKIAR-----ECYRMLKDG 174

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             DAY  D     A  +        V L  +     +   + +G+ E  + V+   
Sbjct: 175 DVDAYATDNLIAMAYPVV--DSEVEVPLKTLGKPDFMGIGVQKGNKELLDFVNAEL 228


>gi|270284246|ref|ZP_05965800.2| glutamate-binding protein [Bifidobacterium gallicum DSM 20093]
 gi|270277400|gb|EFA23254.1| glutamate-binding protein [Bifidobacterium gallicum DSM 20093]
          Length = 286

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 9/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G ++ GI     G      +G ++GFDVD  R +++++    + I +     K+R   
Sbjct: 43  EEGKIRIGIKFDQPGLGFK-KSGTYEGFDVDVARYIANSLGYSDADIVWKEAPPKQREAM 101

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+  +D++      T  R+    ++F    +  GQ  ++      I     L+G  +C 
Sbjct: 102 LQNGDVDMILATYSITDARK--QAVSFAGPYFVAGQDLMVRADDDSIKGPQDLNGKRLCS 159

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G+T+ +T+ + F +   +   +      E   A  +   DA T D   L  L   +  
Sbjct: 160 VTGSTSAVTVKEKFAS---EVQLMEQPSYAECATALFSGIVDAVTTDDIILAGLAANSRG 216

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                ++    ++      I +GDTE    ++     M+ 
Sbjct: 217 K--LKVVGQPFTEEYYGVGIKKGDTELATKINAAITEMIE 254


>gi|167553557|ref|ZP_02347306.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168244868|ref|ZP_02669800.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168263294|ref|ZP_02685267.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467068|ref|ZP_02700916.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822518|ref|ZP_02834518.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194444606|ref|YP_002043609.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450279|ref|YP_002048397.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197251742|ref|YP_002149268.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197263087|ref|ZP_03163161.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198246245|ref|YP_002218238.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388042|ref|ZP_03214654.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|224586195|ref|YP_002639994.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238910512|ref|ZP_04654349.1| probable arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|194403269|gb|ACF63491.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408583|gb|ACF68802.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195630522|gb|EDX49134.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197215445|gb|ACH52842.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197241342|gb|EDY23962.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197940761|gb|ACH78094.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199605140|gb|EDZ03685.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205322022|gb|EDZ09861.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205336334|gb|EDZ23098.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341108|gb|EDZ27872.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347863|gb|EDZ34494.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|224470723|gb|ACN48553.1| probable arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|320088781|emb|CBY98539.1| Arginine-binding periplasmic protein 1 Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|326630270|gb|EGE36613.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 246

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  + +   S S              L  G +     +  V A+    GFD
Sbjct: 1   MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  +   +      +L+ K+ D +    D T  RE    ++F  
Sbjct: 50  IDVANAVCKEM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K    + + L G  + ++ GTT +  L D          P+ ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 + +R +   GD   + A+        ++ I+ +  S           A+ +G+ 
Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 218 ALLQEINAALDKVKASPEYA 237


>gi|308186180|ref|YP_003930311.1| glutamine-binding periplasmic protein precursor glnH [Pantoea
           vagans C9-1]
 gi|308056690|gb|ADO08862.1| Glutamine-binding periplasmic protein precursor glnH [Pantoea
           vagans C9-1]
          Length = 248

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 21/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L + F  S +              L    +T  V F   + +  + GFD
Sbjct: 1   MKSLLKVSVAALALAFSLSSTAAE---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ++ +D+       T  R+    + F  
Sbjct: 51  VDLWDAIAKELKLDY---TLKPMDFSGIIPALQTRNVDLALAGITITEERKK--AIEFSD 105

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I  +S L+G  + V++GT +     +Y KA+        F  +
Sbjct: 106 GYYKSGLQVMVRNNENNIKGISDLNGKVVAVKSGTGSV----EYAKANIKSKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T  +      + D I       A  +G  +   
Sbjct: 162 DSAYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAVGDSIEAQQYGIAFPKGSDDLRE 220

Query: 240 IVSWTHYAMVT 250
            V+     +  
Sbjct: 221 KVNGALKTLKE 231


>gi|289811360|ref|ZP_06541989.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 235

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 80/249 (32%), Gaps = 25/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + A+    GFD
Sbjct: 1   MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    + + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN +  P+   +       + L  A+   +    
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217

Query: 239 NIVSWTHYA 247
             ++    A
Sbjct: 218 EKLNNALAA 226


>gi|47569426|ref|ZP_00240108.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bacillus cereus G9241]
 gi|228983610|ref|ZP_04143814.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|47553934|gb|EAL12303.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bacillus cereus G9241]
 gi|228776095|gb|EEM24457.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 264

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKALVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|296103152|ref|YP_003613298.1| arginine transporter, periplasmic binding protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057611|gb|ADF62349.1| arginine transporter, periplasmic binding protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 243

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALLASFSLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ID +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFSNQAFDSLIPSLKFRRIDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFIGQKG-KFTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +      ND+  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLKANDKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNAAL 224


>gi|256785609|ref|ZP_05524040.1| bifunctional protein [Streptomyces lividans TK24]
 gi|289769505|ref|ZP_06528883.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289699704|gb|EFD67133.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 691

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 2/226 (0%)

Query: 32  KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            R  L  G      G +    + G W GFDVD   AL+  +    +++ +  +    R  
Sbjct: 438 ARKRLTIGAKEDQPGLSFYNKDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRAS 497

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-IC 149
            L++ ++D++  +   T  RE   G++F    Y  G   ++ K      + +        
Sbjct: 498 KLKNGEVDLVVASYSMTPEREKRDGISFVGPYYKAGSSLLVRKNSAKYDLGEAVDVKRNR 557

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+  T  + T AD  +           +  +E        R   Y      +       +
Sbjct: 558 VEVCTARDSTYADRLEEDGYTTGKWQPDTYKECVERLLDKRSSVYAVASDDVLLAGYAQN 617

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            P+   +LP      P   A+ + D    + V      ++  +E  
Sbjct: 618 DPAHLKLLPSGAGTEPYGVAMRKDDPLLKSKVCSGLQEILAGKEWA 663


>gi|145632444|ref|ZP_01788179.1| CTP synthetase [Haemophilus influenzae 3655]
 gi|145634238|ref|ZP_01789949.1| CTP synthetase [Haemophilus influenzae PittAA]
 gi|229843881|ref|ZP_04464022.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae 6P18H1]
 gi|144987351|gb|EDJ93881.1| CTP synthetase [Haemophilus influenzae 3655]
 gi|145268682|gb|EDK08675.1| CTP synthetase [Haemophilus influenzae PittAA]
 gi|229812875|gb|EEP48563.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus
           influenzae 6P18H1]
          Length = 257

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E     +F  
Sbjct: 61  VEVIRKVTEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I S   L G         +         KA       +V + +
Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R +A   D  A+      +       I  D   K+P A A +QG+     
Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228

Query: 240 IVSWTHYAM 248
             +    A+
Sbjct: 229 KFNQVLEAL 237


>gi|319650478|ref|ZP_08004618.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317397659|gb|EFV78357.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 273

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 76/267 (28%), Gaps = 29/267 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINTGL 44
           M K  F ++L   +L  +                       +   ++  G L  G     
Sbjct: 1   MKKTLFTAVLICFVLIISGCGTNKANPDNQDQPASEEQEQDLWKKVQDEGKLLIGTEGTY 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F      G+  GFDV+  + ++  +   P    +L       F  L SK+ D+++   
Sbjct: 61  PPFTFHDDKGELTGFDVEISKEVAKRLGLKPE---FLETQWDAMFAGLDSKRFDMIANQV 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADY 163
                 +      F           I H   + +SS   + G     Q+ T+    LA  
Sbjct: 118 GI--RPDRQEKYDFSDPYISSAAVLITHESNESVSSFEDIEGLK-AAQSMTSNYADLAKS 174

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           + A       +  +   +      + R D    D  +    K          I  +    
Sbjct: 175 YGA-----EIVGVDGFNQAIELINSKRADVTLNDNLSFLDFKKHKPDAPV-KIADESEDA 228

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           S       +G     N V+     MV 
Sbjct: 229 SQSGLMFRKGSDTLVNEVNKALTEMVE 255


>gi|227892707|ref|ZP_04010512.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus ultunensis DSM 16047]
 gi|227865484|gb|EEJ72905.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus ultunensis DSM 16047]
 gi|323466211|gb|ADX69898.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus helveticus H10]
          Length = 286

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 30/260 (11%)

Query: 2   YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43
            K F   +S++  +++  ++                  +N + +  IK+RG+++ G+   
Sbjct: 4   RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L  +  V + G   GFD+   R L+  +   P   ++  LN   R  AL S ++D++  N
Sbjct: 64  LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSNKVDMVLAN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +  K   I+S  QL G  + +  G+T E      
Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
             A+      + F+   +   A +  R  A   D S LYA       P   V +  I   
Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +APA+ +G+       + 
Sbjct: 232 QFIAPAVKKGNKSLLKWTNK 251


>gi|313622703|gb|EFR93059.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua
           FSL J1-023]
          Length = 247

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 94/256 (36%), Gaps = 24/256 (9%)

Query: 1   MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K     F +IL + I  F+      +  T    L  I+++G L  G++     +    
Sbjct: 1   MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K      +SV+  +G  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQEELAKNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +    +  ++V ++    ++++ DA   +     A    +   +   I     SK   
Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKE-T 230

Query: 227 APAIIQGDTEWYNIVS 242
           A A+ +G T     V+
Sbjct: 231 AIAMPKGSTALQEKVN 246


>gi|327183916|gb|AEA32363.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           amylovorus GRL 1118]
          Length = 286

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 30/260 (11%)

Query: 2   YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43
            K F   +S++  +++  ++                  +N + +  IK+RG+++ G+   
Sbjct: 4   RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L  +  V + G   GFD+   R L+  +   P   ++  LN   R  AL S ++D++  N
Sbjct: 64  LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSDKVDMVLAN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +  K   I+S  QL G  + +  G+T E      
Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
             A+      + F+   +   A +  R  A   D S LYA       P   V +  I   
Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +APA+ +G+       + 
Sbjct: 232 QFIAPAVKKGNKSLLKWTNK 251


>gi|294679058|ref|YP_003579668.1| polar amino acid ABC transporter periplasmic polar amino
           acid-binding protein [Rhodobacter capsulatus SB 1003]
 gi|294477874|gb|ADE87261.1| polar amino acid ABC transporter, periplasmic polar amino
           acid-binding protein [Rhodobacter capsulatus SB 1003]
          Length = 278

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 86/243 (35%), Gaps = 13/243 (5%)

Query: 7   VSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  L L  +   S +  A         IK+ G ++ G+      F     +G   G +++
Sbjct: 8   LGALLLAGVTALSGAAQAQDFPPLPAAIKEAGKIRIGVKCDSPPFGASGPDGKPLGIEIE 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R + +  F   +  +   + ++ R  +L S ++D++      T  R     + +  I 
Sbjct: 68  MARKIGTFAFGSEAGAELSCVTSEARIPSLNSGKLDLILATLGRTPAR--MDVIDYSDIY 125

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           ++     ++     + +++ LSG ++ V  G T    L     A+      +      + 
Sbjct: 126 FWGSSNVLVPADSPVKTLADLSGKTVIVVKGATQIKWLE----ANIPGIEILQLNTTADG 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A +  R D + GD   +Y L        E  ++ + +        + + + E    V 
Sbjct: 182 VQALKQGRADGFVGDGGLVYTL---AGNYPETRVVEEGLDLGVNGIGLRKNEPELKAFVD 238

Query: 243 WTH 245
              
Sbjct: 239 AAL 241


>gi|270292476|ref|ZP_06198687.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M143]
 gi|331266107|ref|YP_004325737.1| ABC transporter substrate-binding lipoprotein [Streptococcus oralis
           Uo5]
 gi|270278455|gb|EFA24301.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M143]
 gi|326682779|emb|CBZ00396.1| ABC transporter substrate-binding lipoprotein [Streptococcus oralis
           Uo5]
          Length = 271

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K   V    L  +   +  +    + S +  IK++G L    +     F     V    
Sbjct: 4   KKWILVVCSMLASMVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L+ A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLTSLASANIAAQKGTVPETMVKEQLP----NAQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N       +   +      A AI +
Sbjct: 175 LTSLANMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKK 234

Query: 233 GDTEWYNIVSWTHY 246
             ++   +V     
Sbjct: 235 NQSDLKAVVDKVIQ 248


>gi|265983956|ref|ZP_06096691.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|264662548|gb|EEZ32809.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
          Length = 282

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 77/252 (30%), Gaps = 20/252 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F     C +I+ F +           ++   L  G       F  +  +G   GFDVD
Sbjct: 22  RGFKRIAACAVIVGFAAIGAA-----RAEEPLKLVIGTEGAYPPFNFINPDGSLSGFDVD 76

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RAL   +    ++  ++         ALQ+ + D    +   T  R+    + F    
Sbjct: 77  IARALCDEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 131

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y    G    K   I   +   L+G +I VQ  TT        F           +   E
Sbjct: 132 YNTPLGVAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEQVF----TDSTIKAYPTAE 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236
           E        R DA   D   L     T D     +       D I    +  A  +G  E
Sbjct: 188 EYRLDLANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDAIHGVGVGVAFKKGRPE 247

Query: 237 WYNIVSWTHYAM 248
                +    A+
Sbjct: 248 LVEKFNAAIKAI 259


>gi|55821470|ref|YP_139912.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737455|gb|AAV61097.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
          Length = 265

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 75/261 (28%), Gaps = 15/261 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K  F ++ L           +       IK+   +     +    F     V      
Sbjct: 1   MKKFWFMLTALVATCFLVACRGSQGVSTKTIKENKKIVLATESEFAPFEFKSLVNGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+   +      +++  ++      ++QS + DI       T  R+     
Sbjct: 61  VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +S   L+  ++  Q G+  E      F         +
Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETVAKKQFSKA----SVV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    ++ +  A   + +        ND  +              A AI +G 
Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDALTLASFNLKSDGSDAYAVAIRKGS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    ++        + +  
Sbjct: 232 DDLLKEINAVIKETKESGKFD 252


>gi|330971782|gb|EGH71848.1| cystine transporter subunit [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 221

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 69/209 (33%), Gaps = 8/209 (3%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  +G   GF+
Sbjct: 7   RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL S+++D++      +  R+     +   
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSRRLDVVINQVTISDERKKKYDFSEPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S   LSG  + V  GT  E    ++ KA+        ++   
Sbjct: 124 TISGIQALVLKKNADTIKSAKDLSGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                    R DA   D  A   +     
Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMAAKTK 208


>gi|317472160|ref|ZP_07931492.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
 gi|316900564|gb|EFV22546.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
          Length = 265

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 94/257 (36%), Gaps = 16/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V++  ++         +      I +   +  G N     F  V  N    GFD
Sbjct: 1   MRKILTVALAGVLAATMLFAGCSKKEESKIPE--KIIVGTNAEFPPFEYVDDNKKVDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   + ++  +      I+   +  K    +++SK I++++     T  R     + F  
Sbjct: 59  IALMKEIAKRMDKK---IEIQNMEFKSLIGSMESKTINVVAAGMTKTEER--QNAVDFSD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYHPIVFERV 179
             Y   Q  I++K   I+ +SQL G  I VQ GTT +L  + D F     +   +   +V
Sbjct: 114 SYYTSNQAIIVNKDSKITKLSQLDGKKIGVQEGTTGDLISSGDKFGEPGKEKVVVKKAKV 173

Query: 180 E------EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +      +     +    DA   D     A +   +   +  ++ D         A+ +G
Sbjct: 174 KRFKKGVDAVMDLKNGSVDAVVIDE--KPAQEFVKNNSKKLKLVIDSAGAEYYCLALPKG 231

Query: 234 DTEWYNIVSWTHYAMVT 250
           + E+   ++    A+  
Sbjct: 232 NEEFKKEINKQLKAIKE 248


>gi|124268063|ref|YP_001022067.1| putative amino acid binding protein [Methylibium petroleiphilum
           PM1]
 gi|124260838|gb|ABM95832.1| putative amino acid binding protein [Methylibium petroleiphilum
           PM1]
          Length = 263

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 30/258 (11%)

Query: 1   MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +  F S L L  +   +     + +            L+  +      F+EV  +G  
Sbjct: 1   MTR--FASFLALTAVLLFAAERGLAADG---------KKLRIAVEGAYPPFSEVTPSGQL 49

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D   AL + +    ++   +  +      ALQ+++ D +  +   T  R+  +  
Sbjct: 50  KGFDIDIANALCAQM---KTECTLVQQDFDGMIPALQARKFDAIVASMSITPERQKVVA- 105

Query: 117 AFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    Y      +      +  +   L G  I VQ  T  +      FK        + 
Sbjct: 106 -FTERYYQTPARLVAKSGSKLELTPEGLKGRKIGVQRSTIHDRFATATFK----GAEIVR 160

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAI 230
           + + +E+     A R DA   D  A     L   +   +  +                A+
Sbjct: 161 YTKQDEVFLDLAAGRIDATLQDSVAADVGFLKTPQGKGYGYIGPFYDDEKFFGVGAGIAL 220

Query: 231 IQGDTEWYNIVSWTHYAM 248
            +GDTE  + ++     +
Sbjct: 221 RKGDTELQSKLNAAIKGI 238


>gi|295699405|ref|YP_003607298.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295438618|gb|ADG17787.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 271

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 79/240 (32%), Gaps = 11/240 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             + L +  L     + +A  L DI K G ++ G+      F  +  +    G+D+D   
Sbjct: 18  LAATLAITALGALPSAAHADALDDIAKSGTVRIGVFEDYPPFGSIGPDMKPVGYDIDVAN 77

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +  A+    +K++ +P+    R   L   + D+L      T  RE    + F       
Sbjct: 78  LIGKAL---NAKVELVPVTGDNRMAFLADHKTDMLLS-VGQTPEREKV--IDFSQPYAPY 131

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                  K   + + + L G SI V  GT  +L++           +   F+      +A
Sbjct: 132 YLAVFGPKSLPVKNAADLGGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISA 188

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + + +             +      P+        +  SP    + + +      V  T 
Sbjct: 189 FLSGQVQLMVVGNDVGATILAR--HPANDPEQKFALFSSPDHVGLNKNEPRLKAKVDETI 246


>gi|73537420|ref|YP_297787.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72120757|gb|AAZ62943.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 266

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 14/241 (5%)

Query: 13  IILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
            +L FT+ + +A  +L  +K  G LK G+      F      G   GFDV   RA++  +
Sbjct: 15  TVLGFTAPAVHAEDLLDTVKASGVLKVGMEGTYPPFGYRNGQGQLDGFDVAVARAVADKM 74

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K+Q++          LQ+ + D++      T  R+    L F     +     + 
Sbjct: 75  G---LKVQFITTEWSGIIAGLQAGKFDVIVNQVSMTPARK--QALDFTQPYVYSAVQVLQ 129

Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
                    S+  L G S+ V  G+                     +    E      A 
Sbjct: 130 RSNDKREFGSLDALKGKSVGVTLGSNYAD-----LAKSVPGIQVQTYPGTSENLRDLAAG 184

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R DA   D   L  L    + P     L        +     +G+ ++   +     A+ 
Sbjct: 185 RIDAALNDRLMLPYLIKNANLPLRTGALLAGTKLE-MGIPYRKGNPKFAKAIDDALIALQ 243

Query: 250 T 250
            
Sbjct: 244 Q 244


>gi|206578017|ref|YP_002239489.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella pneumoniae 342]
 gi|288936337|ref|YP_003440396.1| cationic amino acid ABC transporter periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|290510607|ref|ZP_06549977.1| arginine transport system substrate-binding protein [Klebsiella sp.
           1_1_55]
 gi|206567075|gb|ACI08851.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella pneumoniae 342]
 gi|288891046|gb|ADC59364.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|289777323|gb|EFD85321.1| arginine transport system substrate-binding protein [Klebsiella sp.
           1_1_55]
          Length = 243

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 77/252 (30%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + AN    GFD
Sbjct: 1   MKKLVLAALLTTFTFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  LDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    S   L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDAFHSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P      P +         L  A+   +  
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNAALKAI 227


>gi|228913539|ref|ZP_04077168.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228932270|ref|ZP_04095154.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228827395|gb|EEM73145.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228846126|gb|EEM91148.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|324324899|gb|ADY20159.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 265

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|225859159|ref|YP_002740669.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae 70585]
 gi|225721945|gb|ACO17799.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae 70585]
          Length = 271

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    L   F  +  + +    S +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++ L ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEILSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        ++ L  A+I  Q GT  E  +            
Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKAQLPKA----Q 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N   +   +   +      A A+ +
Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234

Query: 233 GDTEWYNIVSWTHY 246
              +   +V     
Sbjct: 235 NSDDLKEVVDKVIQ 248


>gi|42780021|ref|NP_977268.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
 gi|42735939|gb|AAS39876.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus ATCC 10987]
          Length = 265

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|283833895|ref|ZP_06353636.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Citrobacter youngae ATCC 29220]
 gi|291070566|gb|EFE08675.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Citrobacter youngae ATCC 29220]
          Length = 248

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 82/249 (32%), Gaps = 20/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAVAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R DA   D   +     T     +   + D +       A  +G  E    V
Sbjct: 164 AYMELGTSRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELREKV 222

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 223 NGALKTLKE 231


>gi|330829213|ref|YP_004392165.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic
           binding protein [Aeromonas veronii B565]
 gi|328804349|gb|AEB49548.1| ABC-type histidine/lysine/arginine/ornithine transporter,
           periplasmic binding protein [Aeromonas veronii B565]
          Length = 257

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 24/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +   +   +  +         K+   ++ G+      F+  + +G+ KGFD
Sbjct: 1   MNKLMLATAVVTALASGSLMA---------KEWKEVRIGVEGAYPPFSWTEPSGEVKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +     K   +  +      AL S++ D +    D T  R+    + F  
Sbjct: 52  IDIANALCEEM---KVKCTLVKQDWDGIIPALLSRKFDAIIATMDITEERKK--KVDFTQ 106

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F   K   +    + + G S+ VQ  T+ +  + D F           +   
Sbjct: 107 KYQHIPARFAAKKGTDVQLDKAFMEGKSVAVQRATSMDTFITDNFP----NATIKRYGTA 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E     ++ R D    D +A+    L  +       +   ++           A+ + D
Sbjct: 163 DEAYLDLKSGRVDYVLADSAAITDGLLKKEGGDAFEFVGPKLTDPKWFGEGAGIAVRKAD 222

Query: 235 TEWYNIVSWTHYAM 248
            +     +    A+
Sbjct: 223 KDLKEKFNAAILAL 236


>gi|296103259|ref|YP_003613405.1| glutamine ABC transporter periplasmic protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057718|gb|ADF62456.1| glutamine ABC transporter periplasmic protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 247

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 82/249 (32%), Gaps = 21/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 52  LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 106

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 107 YKSGLLVMVKADNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 162

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T         + + +       A  +G  +    V
Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQQYGIAFPKGSDDLRTKV 221

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 222 NGALKTLKE 230


>gi|260550885|ref|ZP_05825091.1| lysine-arginine-ornithine-histidine-binding periplasmic protein
           [Acinetobacter sp. RUH2624]
 gi|260406012|gb|EEW99498.1| lysine-arginine-ornithine-histidine-binding periplasmic protein
           [Acinetobacter sp. RUH2624]
          Length = 261

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 5   MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R     + F  
Sbjct: 56  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    + + + L G  + VQ GT  E     Y+    +    + +   
Sbjct: 111 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +          +          A  + + D
Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDVKTLGVGAAIGLRKED 228

Query: 235 TEWYNIVSWTHYAMVT 250
            +    +     A++ 
Sbjct: 229 ADLKANIDKALAAIIA 244


>gi|260103307|ref|ZP_05753544.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus helveticus DSM 20075]
 gi|260082888|gb|EEW67008.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus helveticus DSM 20075]
          Length = 286

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 30/260 (11%)

Query: 2   YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43
            K F   +S++  +++  ++                  +N + +  IK+RG+++ G+   
Sbjct: 4   RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L  +  V + G   GFD+   R L+  +   P   ++  LN   R  AL S ++D++  N
Sbjct: 64  LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSNKVDMVLAN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F         G +  K   I+S  QL G  + +  G+T E      
Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
             A+      + F+   +   A +  R  A   D S LYA       P   V +  I   
Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231

Query: 224 SPLAPAIIQGDTEWYNIVSW 243
             +APA+ +G+       + 
Sbjct: 232 QFIAPAVKKGNKSLLKWTNK 251


>gi|157363346|ref|YP_001470113.1| extracellular solute-binding protein [Thermotoga lettingae TMO]
 gi|157313950|gb|ABV33049.1| extracellular solute-binding protein family 3 [Thermotoga lettingae
           TMO]
          Length = 252

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 21/244 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F + I+  ++         AS++ DI+KRG L+ G + G +        G+  G +
Sbjct: 1   MRRFFVILIVTALLFTGL-----ASLIDDIQKRGVLRVGQDEGYMPLYGTDEKGERVGLE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      ++Y+ +N      AL S + DI+      T  R  +L + F  
Sbjct: 56  VELINKIAEILGVK---VEYVIVNWDGIIPALISGKFDIIFSGMTITPER--ALKVNFSA 110

Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                GQ  + +K   K   +   L+     I VQ GTT E T    F         + F
Sbjct: 111 PYLTVGQAILYNKSVFKTPPTYQDLADKPVKIAVQLGTTGEFTARRKFPKA----EILTF 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             ++E      + R D    D   +  L    +      +  +++S+  L  AI +GD E
Sbjct: 167 STMDEAAFQVVSKRADIMVNDSIYVKFLTQKYE---TLGMTNELLSREDLGIAIRKGDME 223

Query: 237 WYNI 240
               
Sbjct: 224 ALRW 227


>gi|322375496|ref|ZP_08050009.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C300]
 gi|321279759|gb|EFX56799.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C300]
          Length = 271

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 80/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K   V    L  +   +  +    + S +  IK++G L    +     F     V    
Sbjct: 4   KKWILVVCSMLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        +S  + A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSFASANIAAQKGTVPETMVKEQLP----NAQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N       +   I      A AI +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTIKDGEANAVAIKK 234

Query: 233 GDTEWYNIVSWTHY 246
             ++   +V     
Sbjct: 235 DQSDLKAVVDKVIQ 248


>gi|306838803|ref|ZP_07471634.1| extracellular solute-binding protein [Brucella sp. NF 2653]
 gi|306406087|gb|EFM62335.1| extracellular solute-binding protein [Brucella sp. NF 2653]
          Length = 262

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 77/252 (30%), Gaps = 20/252 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F     C +I+ F +           ++   L  G       F  +  +G   GFDVD
Sbjct: 2   RGFKRIAACAVIVGFAAIGAA-----RAEEPLKLVIGTEGAYPPFNFINPDGSLSGFDVD 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RAL   +    ++  ++         ALQ+ + D    +   T  R+    + F    
Sbjct: 57  IARALCDEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 111

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y    G    K   I   +   L+G +I VQ  TT        F           +   E
Sbjct: 112 YNTPLGVAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEQVF----TDSTIKAYPTAE 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236
           E        R DA   D   L     T D     +       D I    +  A  +G  E
Sbjct: 168 EYRLDLANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDAIHGVGVGVAFKKGRPE 227

Query: 237 WYNIVSWTHYAM 248
                +    A+
Sbjct: 228 LVEKFNAAIKAI 239


>gi|284048142|ref|YP_003398481.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
 gi|283952363|gb|ADB47166.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
          Length = 292

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 91/280 (32%), Gaps = 43/280 (15%)

Query: 2   YKDFFVSILCLIILFFTSFSTN-------------ASILGDIKKRGFLKCGINTGLVGFA 48
            K F V +  L+ +   +   +             A  +  IKKRG L+ G+     GF 
Sbjct: 8   RKIFAVGVTVLMAVSLFAGCGDEKKSADSGKSSNVAEDIAAIKKRGVLRVGVKNSTKGFG 67

Query: 49  EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G + G +VD   AL+  +  D   ++Y P+ A  R   L S  ID+++     T
Sbjct: 68  YQDPATGKFTGLEVDLGEALAKKLGVD---VEYTPVTAATRTALLDSGDIDMVAATFTIT 124

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+      F    Y D  G ++ K   I+S++ L G  + V +G+T+   L +     
Sbjct: 125 PERKK--SWDFTTPYYTDHVGVLVEKASNINSLADLKGKVVGVSSGSTSAKALVEAMIKA 182

Query: 168 N------------------MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                                     +     I  A  +    A+  D S L        
Sbjct: 183 KVIDGEGFDPKNFDAATWTKGVSFKQYADYPAISTALTSGEVSAFCVDKSILAIYHT--- 239

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              +   + +  +      A  +G +             +
Sbjct: 240 --DDRTFIKEEFAPQDYGLATKKG-SGMSKYCEEAVQGWL 276


>gi|237730789|ref|ZP_04561270.1| glutamine ABC transporter periplasmic protein [Citrobacter sp.
           30_2]
 gi|226906328|gb|EEH92246.1| glutamine ABC transporter periplasmic protein [Citrobacter sp.
           30_2]
          Length = 248

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 83/249 (33%), Gaps = 20/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 53  LWAAVAKELKLDYE---LKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  +    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDDLREKV 222

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 223 NGALKTLKE 231


>gi|77410988|ref|ZP_00787343.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae CJB111]
 gi|77162912|gb|EAO73868.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae CJB111]
          Length = 301

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55
                  I  L ++  ++   +   +  I      +K   +  G +   V       +GD
Sbjct: 29  KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 88

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          +++ P+N   +   L +  ID++      T  R     
Sbjct: 89  YIGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 143

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           +AF      + Q  +      I+S+  + G  +  Q+G++         D  K       
Sbjct: 144 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 203

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + ++   +     + +R D    D                +  +              +
Sbjct: 204 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 263

Query: 233 GDTEWYNIVSWTHY 246
            D      ++    
Sbjct: 264 VDRRLIEKINKAFK 277


>gi|228931859|ref|ZP_04094755.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228827839|gb|EEM73577.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 264

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   K +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKKNDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +               ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVT------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|229194740|ref|ZP_04321531.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           m1293]
 gi|228588751|gb|EEK46778.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           m1293]
          Length = 264

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|283477969|emb|CAY73885.1| Histidine ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
          Length = 261

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 89/250 (35%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +  L ++   S +  A     I++   ++  ++     F      G+  GFD
Sbjct: 1   MKRATVGKLAALALMAGCSLTAQA----KIEQ---VRFAVDASYPPFESKTPKGELVGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    +   ++         AL++++ D +  +   T  R     + F  
Sbjct: 54  IDLGNALCAQM---QANCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQINFTV 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K  G+   +  L G S+ V+ GT  E      ++ H    + + +   
Sbjct: 109 PLYDTHTQLIARKGSGLLPTADSLKGKSVGVEQGTVQERYALAKWQPHG--VNVVAYGDQ 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            +++    + R D    D +      L + +  +   L   I + P+     A  + +GD
Sbjct: 167 AQVENDLVSGRLDVVFTDAAQAAIGFLKHPQGQDF-ELAGPIVQDPIIGPGTAIGLRKGD 225

Query: 235 TEWYNIVSWT 244
            E    +   
Sbjct: 226 DELKTALDNA 235


>gi|194738205|ref|YP_002117295.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194713707|gb|ACF92928.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
          Length = 246

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 88/260 (33%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  + +   S S              L  G +     +  V A+    GFD
Sbjct: 1   MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  +   +       L+ K+ D +    D T  RE    ++F  
Sbjct: 50  IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K    + + L G  + ++ GTT +  L D          P+ ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 + +R +   GD   + A+        ++ I+ +  S           A+ +G+ 
Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 218 ALLQEINAALDKVKASPEYA 237


>gi|301646298|ref|ZP_07246189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 146-1]
 gi|331641381|ref|ZP_08342516.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli H736]
 gi|301075501|gb|EFK90307.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 146-1]
 gi|331038179|gb|EGI10399.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli H736]
          Length = 260

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 18  MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|294636988|ref|ZP_06715310.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Edwardsiella tarda ATCC 23685]
 gi|291089816|gb|EFE22377.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Edwardsiella tarda ATCC 23685]
          Length = 243

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I +  ++                ++         F  + A    +GFD
Sbjct: 1   MKKIIIAAMLAGISVSASANE-------------TIRFAAEASYPPFEFMDAQNKMQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + I    +   +   +      +L+ K+ID +    D T  R+    + F  
Sbjct: 48  IDLANAICTQI---KATCTFSNQSFDSLIPSLKFKRIDAVISGMDITPERQK--QVDFSQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L G  + +Q GTT +  L D          P+ ++  +
Sbjct: 103 PYYDNSALFIAEKG-KVADVAALKGKRVGIQNGTTHQKYLMDKHPE----LTPVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N    P    +       S L  A+ +G+++  
Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWLKQNPNLAPVGSKVTDADYFGSGLGIAVRKGNSKLL 217

Query: 239 NIVSWTHY 246
              +    
Sbjct: 218 EQFNQALN 225


>gi|288871529|ref|ZP_06117940.2| CjaA protein [Clostridium hathewayi DSM 13479]
 gi|288863100|gb|EFC95398.1| CjaA protein [Clostridium hathewayi DSM 13479]
          Length = 300

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 99/275 (36%), Gaps = 35/275 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---------------------ILGDIKKRGFLKCG 39
           M K   +  + L +    S +   S                      L +IK+ G +  G
Sbjct: 8   MKKIRKLVTVTLTLSLAFSLAACGSENSSNNNVTANSRKTQNVVYRTLDEIKESGTINIG 67

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           + +    F  V  NG+++G+DV F   +   +      I Y+   A  R   LQ+ + DI
Sbjct: 68  VFSDKNPFGYVDENGEYQGYDVYFANRIGEDLGVK---INYISTEAANRIEYLQTGKADI 124

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTEL 158
           +  N   T  R     + F         G +    + I S+ +  +   I V +GTT E 
Sbjct: 125 ILANFTVTPQRAE--EVDFALPYMNVALGVVSPDSRVIESLDNWNAEDPIIVISGTTAET 182

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            L +    +        ++       A       A+  D + + A           V +P
Sbjct: 183 YLIE----NYPDIPLQKYDSYATAKNALENGNGAAWANDNTEVIAFA--LQNAGYTVGIP 236

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            + S+  +APA+ +G++   + ++    A+   EE
Sbjct: 237 SLGSQDSIAPAVSKGNSTLLDWLNEEIKAL--GEE 269


>gi|295399081|ref|ZP_06809063.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110315|ref|YP_003988631.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
 gi|294978547|gb|EFG54143.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215416|gb|ADP74020.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
          Length = 260

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 91/244 (37%), Gaps = 10/244 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAI 71
            L     + +    G   ++  LK G +     F  +      +  GFDVD  + ++  +
Sbjct: 16  GLLSACGAGSEEKNGSGAQKKVLKMGTSADYAPFEYIDTAKGNEIIGFDVDLAKMITKEL 75

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             +    + + ++      ALQS ++D +      T  R+    + F  + Y      + 
Sbjct: 76  GYE---FEIVDMDFNGLIPALQSGKVDFVLAGMTPTKDRKK--NVDFSDVYYVSRNMIVS 130

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  GI +V  L G ++ VQ G+  E       K  +MK       R+ E+    +A R 
Sbjct: 131 KKGSGIKTVKDLKGKTVGVQTGSIQEEEAKKIAKTVDMKLE--SRNRIPELIQEIQAGRF 188

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DA   + +       T++   E   +P    ++  A A  +G ++  +  +      +  
Sbjct: 189 DAAIIEDTVAKGYLQTSNGKLEGHTIPTNEQEAGSAIAFPKG-SKLRDEFNKVLREKIEN 247

Query: 252 EELG 255
            E+ 
Sbjct: 248 GEVD 251


>gi|126739646|ref|ZP_01755338.1| putative ABC transporter periplasmic amino acid-binding protein
           [Roseobacter sp. SK209-2-6]
 gi|126719292|gb|EBA16002.1| putative ABC transporter periplasmic amino acid-binding protein
           [Roseobacter sp. SK209-2-6]
          Length = 267

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 83/218 (38%), Gaps = 7/218 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L L I   ++ +  A  L ++  RG L+CG+           AN +  GFD
Sbjct: 1   MLKKL--AALGLAIGLSSTGAAVADTLDNVVDRGTLRCGVVLDFPPIGYRDANNEPAGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C  L++A+  D   +    +   ER   + + + D++   T  +L R  ++G  F  
Sbjct: 59  VEYCADLAAALEVDYEILP---VTWAERLPVIVTGRADVVFGGTSDSLARARTVG--FTI 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +++ + GI S   + G  +    GT  E            ++    ++   
Sbjct: 114 PYAIYYAQGVVNAESGIKSFDDVRGKRVAGAVGTVPEQEWLKIAGEWGEEHLYQGYQSEN 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           E+  A    + D      +A+  +    D       +P
Sbjct: 174 EVFLAVAQGKADIGLTTNTAVKPVTGQYDNVEAGPRMP 211


>gi|91788991|ref|YP_549943.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91698216|gb|ABE45045.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 266

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 75/251 (29%), Gaps = 19/251 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     +    S + + +      +  A +L  +K+RG LK  +      F     N   
Sbjct: 1   MKNMNIRKALASTILVALALGAGIAHAADLLDTVKQRGTLKVALEGTYPPFNYK-ENDKL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF+V+   AL+  +        +           LQ+ + D++      T  R+ +   
Sbjct: 60  AGFEVELANALAQKLGVKAE---FTTSEWSAILAGLQAGKYDVVINQVGITDKRKET--F 114

Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F           I+ K +     +++ L G  + +  GT      AD  K         
Sbjct: 115 DFSEPYTISSPQLIIRKDEKRVFKTLADLKGKKLGLGQGT----NFADMAKKVG-DIDIK 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +   +E        R DA   D   +  +      P        +          ++ +
Sbjct: 170 TYPGAQEYLQDLALGRIDAALNDSLLIPYIVKQTKLP--LKPGAPVGELEKSGIPFVKNN 227

Query: 235 TEWYNIVSWTH 245
            ++   +    
Sbjct: 228 PKFKAAIDKAL 238


>gi|229816604|ref|ZP_04446902.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM
           13280]
 gi|229807810|gb|EEP43614.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM
           13280]
          Length = 318

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 90/252 (35%), Gaps = 21/252 (8%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD- 73
                S   S L  IK RG L  G+   + G+         + G ++D C  +++A+FD 
Sbjct: 66  GSAPASAPGSKLAAIKARGKLNAGVKKDVPGYGYYDPAARTYAGMEIDLCYQIAAAVFDV 125

Query: 74  ------DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
                 +   + +  +  K R   + + Q+D++      T  R       F      D  
Sbjct: 126 TYDEARERELVSFTDVTPKTRGPLIDNDQLDVVCATYTITPER--IESWDFSTPYRTDYV 183

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAA 185
           G ++ K+ G + ++ L G  I V  G TT+  +    K   +   P  + F     I ++
Sbjct: 184 GLMVKKRSGFTRIADLDGRIIGVSQGATTQGLIEQMLKDEGIDARPEFLAFSGYPIIKSS 243

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             A   D +  D S L          +  ++ P++           +  ++   +V    
Sbjct: 244 LDAGNIDCFAMDRSTLAGY----TNETVELLEPEVKFGEQNYGVATKKGSDLSTVVDECV 299

Query: 246 YA-----MVTAE 252
            A      + AE
Sbjct: 300 RACAASGWLDAE 311


>gi|209516321|ref|ZP_03265178.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209503257|gb|EEA03256.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 269

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 80/239 (33%), Gaps = 11/239 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +++  L  L     + +A  L DI K G ++ G+      F  +  +    G+D+D    
Sbjct: 17  LAMTALSALCALPSAAHADALDDIAKSGTVRIGVFEDYPPFGSIGPDMKPVGYDIDVANL 76

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +  A+    +K++ +P+    R   L   + D+L          E +  + F        
Sbjct: 77  IGKAL---NAKVELVPVTGDNRMAFLADHKADLL---LSVGQTPERAKVIDFSQPYAPYY 130

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K   + S + L+G SI V  GT  +L++           +   F+      +A+
Sbjct: 131 LAVFGPKSLPVKSAADLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAF 187

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + +             +      P+        +  SP    + + +      V  T 
Sbjct: 188 ISGQVQLMVVGNDVGATILAR--HPANDPEQKFALFSSPDHVGLNKNEPRLKAKVDETI 244


>gi|204927139|ref|ZP_03218341.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204323804|gb|EDZ08999.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 246

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  + +   S S              L  G +     +  V A+    GFD
Sbjct: 1   MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  +   +       L+ K+ D +    D T  RE    ++F  
Sbjct: 50  IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K    + + L G  + ++ GTT +  L D          P+ ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 + +R +   GD   + A+        ++ I+ +  +           A+ +G+ 
Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERANDPDYYGKGLGIAVRKGND 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 218 ALLQEINAALDKVKASPEYA 237


>gi|146311037|ref|YP_001176111.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter sp. 638]
 gi|145317913|gb|ABP60060.1| L-arginine-binding protein [Enterobacter sp. 638]
          Length = 243

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 86/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALLASISLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +   +      +L+ K+ID +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFANQSFDSLIPSLKFKRIDAVMAGMDITPEREK--QVLFST 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K    +S+  L G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFIGQKG-KFASIDLLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      ND+  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNAAL 224


>gi|322615516|gb|EFY12436.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618576|gb|EFY15465.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622011|gb|EFY18861.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627083|gb|EFY23875.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631042|gb|EFY27806.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637739|gb|EFY34440.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642403|gb|EFY39007.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645664|gb|EFY42189.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650496|gb|EFY46904.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322659725|gb|EFY55968.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662064|gb|EFY58280.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666187|gb|EFY62365.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672607|gb|EFY68718.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676037|gb|EFY72108.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680521|gb|EFY76559.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684585|gb|EFY80589.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192900|gb|EFZ78126.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197224|gb|EFZ82364.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201659|gb|EFZ86723.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206173|gb|EFZ91135.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323215555|gb|EGA00299.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219540|gb|EGA04025.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227843|gb|EGA11997.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229013|gb|EGA13142.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236375|gb|EGA20451.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237505|gb|EGA21566.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241829|gb|EGA25858.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248022|gb|EGA31959.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254647|gb|EGA38458.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258294|gb|EGA41971.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259571|gb|EGA43205.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265844|gb|EGA49340.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270288|gb|EGA53736.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 246

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 86/257 (33%), Gaps = 22/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  + +   S S              L  G +     +  V A+    GFD
Sbjct: 1   MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  +   +       L+ K+ D +    D T  RE    ++F  
Sbjct: 50  IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K    + + L G  + ++ GTT +  L D          P+ ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRP--SEHVILPDIISKSPLAPAIIQGDTEWY 238
                 + +R +   GD++A+      N      +            L  A+ +G+    
Sbjct: 161 NAFTDLKNNRLEGVFGDVAAIGKWLKNNPNYAIMDERASDPDYYGKGLGIAVRKGNDALL 220

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     +  + E  
Sbjct: 221 QEINAALDKVKASPEYA 237


>gi|259908071|ref|YP_002648427.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand
           binding protein [Erwinia pyrifoliae Ep1/96]
 gi|224963693|emb|CAX55190.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand
           binding protein [Erwinia pyrifoliae Ep1/96]
          Length = 264

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 89/250 (35%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +  L ++   S +  A     I++   ++  ++     F      G+  GFD
Sbjct: 4   MKRATVGKLAALALMAGCSLTAQA----KIEQ---VRFAVDASYPPFESKTPKGELVGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    +   ++         AL++++ D +  +   T  R     + F  
Sbjct: 57  IDLGNALCAQM---QANCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQINFTV 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K  G+   +  L G S+ V+ GT  E      ++ H    + + +   
Sbjct: 112 PLYDTHTQLIARKGSGLLPTADSLKGKSVGVEQGTVQERYALAKWQPHG--VNVVAYGDQ 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            +++    + R D    D +      L + +  +   L   I + P+     A  + +GD
Sbjct: 170 AQVENDLVSGRLDVVFTDAAQAAIGFLKHPQGQDF-ELAGPIVQDPIIGPGTAIGLRKGD 228

Query: 235 TEWYNIVSWT 244
            E    +   
Sbjct: 229 DELKTALDNA 238


>gi|325122858|gb|ADY82381.1| ABC lysine-arginine-ornithine transporter, periplasmic ligand
           binding protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 261

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 5   MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 56  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAKQIA--FSS 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    + + + L G  + VQ GT  E     Y+         + +   
Sbjct: 111 KIYNTPTRMVAKKGSPLLPTAASLKGKRVGVQQGTIQETYAKTYWAPKG--VTVVPYPVQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +          +  +       A  + + D
Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDAKTLGVGAAIGLRKED 228

Query: 235 TEWYNIVSWTHYAMVT 250
            +    ++    A++ 
Sbjct: 229 ADLKANINKALAAIIA 244


>gi|330010081|ref|ZP_08306680.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Klebsiella sp. MS 92-3]
 gi|328534632|gb|EGF61206.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Klebsiella sp. MS 92-3]
          Length = 248

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSVFKVSLAALTLAFAVSSYAANKT---------LVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K ID+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I  V  L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T         + + +       A  +G  E   
Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQNYGIAFPKGSDELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|157146550|ref|YP_001453869.1| glutamine ABC transporter periplasmic protein [Citrobacter koseri
           ATCC BAA-895]
 gi|157083755|gb|ABV13433.1| hypothetical protein CKO_02311 [Citrobacter koseri ATCC BAA-895]
          Length = 248

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAVAKELNLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + + +       A  +G  E    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDELREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|306831678|ref|ZP_07464835.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           amino acid-binding protein [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325978617|ref|YP_004288333.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|304426103|gb|EFM29218.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           amino acid-binding protein [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325178545|emb|CBZ48589.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 281

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 81/266 (30%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAE---VK 51
           M        L +        S   S         DIK +G L   +N     F     V 
Sbjct: 3   MKVSKLFGGLAVAAASLFLLSACGSSSSEDTSVSDIKDKGTLVVALNPEFAPFEFKTLVD 62

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G DV+  +A++  +  D   +++  ++      +LQS + DI       T  R+
Sbjct: 63  GKDTIVGADVEIAKAIAEELGVD---VKFSSMSFNNVLASLQSGKADIAISGISATEERK 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
                 F    Y      ++ K      +    L G S+  Q G+  E   ++       
Sbjct: 120 K--AYDFSDPYYEAENVVLIRKTDIDKYTDTDSLDGLSVGTQKGSIQETVASEQL----T 173

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +   +  E+    +  + +A   +          N   +   I          A A
Sbjct: 174 GAKVVSLTQNSEMINELKNSQIEAVVLEKPIAEGYVANNSDLTISDITLTSDDADAYAVA 233

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +G T+    V+     +  + ++ 
Sbjct: 234 LPKGSTKLTKKVNKVIKELKESGKID 259


>gi|295115214|emb|CBL36061.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 308

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 84/287 (29%), Gaps = 47/287 (16%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28
           M K  F  +    ++F  T+ STNA                                   
Sbjct: 1   MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60

Query: 29  ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                 + K  G     G +        V  +G++ GFD++    ++  +          
Sbjct: 61  EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG---LTFVPQ 117

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+    + + L+S  ID +      T   +      +      + Q  ++ +  GI S +
Sbjct: 118 PIAWDAKNMELESGNIDCIWNGFTMTGREDE---YTWSEPYMENSQVVVVLEDSGIESTA 174

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  + VQA ++ E  L +  +                          DA   D   +
Sbjct: 175 DLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD--VI 232

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            A      R     IL D ++    A    +G+    + V      M
Sbjct: 233 VAGYQLQQRDGGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEM 279


>gi|237807673|ref|YP_002892113.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
 gi|237499934|gb|ACQ92527.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
          Length = 255

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +  +I+  +++               K+   ++  I      F+ V   G   GFD
Sbjct: 1   MKKLWLTAIVASLMVTGA----------QAKQWKEVRVAIEGAYPPFSSVDEKGQLHGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     K   +  +       L +++ D +    D T  R+    + F  
Sbjct: 51  VDITNALCEQM---KVKCTIVKQDWDGMIPGLLARKFDAIISTMDITEERKK--RIDFSG 105

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F   K   I  + + +    I VQ  T+ +  ++D F           +   
Sbjct: 106 KYQHVPAHFAAKKGATIELTQAFMKDKKIAVQRATSMDTYVSDNFP----DTEIKRYGSY 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPAIIQGDT 235
           +E     ++ R D    D +++    +        ++ P +  K         A+ +GD 
Sbjct: 162 DEAYLDLKSGRVDYVLADTASVMDGLVNKSNGEYSLVGPGLSDKKWFGEGAGVALRKGDG 221

Query: 236 EWYNIVSWTH 245
           +   + +   
Sbjct: 222 DLKAMFNKAI 231


>gi|209518797|ref|ZP_03267611.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209500767|gb|EEA00809.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 259

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 67/254 (26%), Gaps = 14/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L+     S +  A     IK  G  K G       F     +G   GFD
Sbjct: 1   MKSIRTILLVALLQAVAVSPAFAADEFAQIKSSGVFKVGTEGTYAPFTYHDESGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  I   P    ++          L   + D +      T  R+      F  
Sbjct: 61  VEIATEIAKRIGVKPE---FVEGKWDGLIAGLDVNRYDAVINEVSVTDARKA--KYDFST 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I +   L G        +       D           I  +  
Sbjct: 116 PYITSHAALIVRADNTTIKTFDDLKGKKSANTLTSNFGKIAKD------HGAEVIAVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238
            E      + R DA   D  +    K            + +       A  + +G+ +  
Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAQVRIAAIDNSAGSDKSAVLVRKGNPQLV 229

Query: 239 NIVSWTHYAMVTAE 252
             +     A + A+
Sbjct: 230 AAIDKAL-ADIKAD 242


>gi|167749252|ref|ZP_02421379.1| hypothetical protein EUBSIR_00203 [Eubacterium siraeum DSM 15702]
 gi|167657781|gb|EDS01911.1| hypothetical protein EUBSIR_00203 [Eubacterium siraeum DSM 15702]
          Length = 310

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 9/225 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +   + L  +K  G    G++           NG+  GFD+D    + + +     K   
Sbjct: 70  AEGDNSLQKVKDAGQFILGLDATFKPMGYTDENGEIVGFDIDVAEEVCNRLGVKLVK--- 126

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+N       L   + D +         R+  + L        +   F++     ++ +
Sbjct: 127 QPINWDTLTTDLNVGKCDCVWNGLSINEERQEKMNL--SEPYMKNAMVFVVKGDSTVAKM 184

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G  I VQ G++ +  L +     ++   PI      E          DA   D   
Sbjct: 185 DDLKGKKISVQNGSSAQTILENSAIKDDITISPIA--TNVEALQQLELGVVDAVFLDE-- 240

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + A     +   ++  L + + +   A A  + D    + V  T 
Sbjct: 241 VVADYEIKNSGKDYKKLAEGLEEEQYAIAFRKNDQALRDAVQKTL 285


>gi|126730632|ref|ZP_01746442.1| probable amino acid ABC transporter, substrate-binding protein
           [Sagittula stellata E-37]
 gi|126708798|gb|EBA07854.1| probable amino acid ABC transporter, substrate-binding protein
           [Sagittula stellata E-37]
          Length = 262

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 81/220 (36%), Gaps = 9/220 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  L +I++RG ++ G+ +    F     +G   G+DV+  + ++  +      ++   
Sbjct: 24  QAGTLDEIRERGTIRVGVPSDSPPFGMKAPDGGLVGYDVEMAQLIADDLG---VALEITN 80

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                R   L S ++DI+  +      R+    + F         G        ++    
Sbjct: 81  AVGSNRVPLLTSGRVDIVISSFGKNEERDKV--IDFSDQYAPFYNGVFGPADIEVNGPED 138

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G S+ V  GT  +L L+              FE      +AY A   D +        
Sbjct: 139 LKGYSVGVTTGTIEDLELS---AKTGDDVTITRFESGASGFSAYFAGAVDFFATGN-VTA 194

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           A  + N      ++   +I+ SP    + +GDT+  + ++
Sbjct: 195 AALMENPNLPREIVPKFLINSSPCYIGVREGDTQMLDYLN 234


>gi|172062771|ref|YP_001810422.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MC40-6]
 gi|171995288|gb|ACB66206.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MC40-6]
          Length = 260

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    L+ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAVA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G     
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIGFT-TK 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I     +  +      + +   L G SI V+ GTT E     Y+       + + ++  +
Sbjct: 109 IYNQPTRLVVKKGSSLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQD 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
            + A   + R DA   D        L + R + +  +   +    +        + + DT
Sbjct: 167 GVYADLTSGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELIDEKVLGIGAGIGLRKEDT 226

Query: 236 EWYNIVSWTHYAMV 249
           +    +      MV
Sbjct: 227 DLKAKIDRAILDMV 240


>gi|270292828|ref|ZP_06199039.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M143]
 gi|270278807|gb|EFA24653.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M143]
          Length = 278

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   V +  +  LF  +       T+       +    +  G ++  V     + +G 
Sbjct: 1   MKKLMLVLVSLMAALFLVACGKNSSETSGDNWSKYESNKSITIGFDSTFVPMGFAQKDGS 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          + + P++   +   L    ID++      T  R     
Sbjct: 61  YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           +AF      + Q  +  K  GI++   ++G ++  QAG++            K       
Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEGNPAILKDIVANNE 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D              +++ +    +     A    +
Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGILNDYNVFTVGLETEAFAVGARK 235

Query: 233 GDTEWYNIVSW 243
            DT   N ++ 
Sbjct: 236 EDTTLVNKINE 246


>gi|229068108|ref|ZP_04201415.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           F65185]
 gi|229077712|ref|ZP_04210342.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock4-2]
 gi|229176945|ref|ZP_04304340.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           172560W]
 gi|229188624|ref|ZP_04315663.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           ATCC 10876]
 gi|228594813|gb|EEK52593.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           ATCC 10876]
 gi|228606420|gb|EEK63846.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           172560W]
 gi|228705653|gb|EEL58009.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock4-2]
 gi|228714922|gb|EEL66790.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           F65185]
          Length = 264

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +     +  + +       + S  +S      ++   +  ++     F   + +G   
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSTNGEK-EFRYAMSGLYKPFNYKENDGKLV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++
Sbjct: 60  GFDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114

Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G   F+  K   ISS   L G  I V   +T +  +A              +
Sbjct: 115 FSNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +  AI + D E
Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 227 MVEKVNKALDEII 239


>gi|56414020|ref|YP_151095.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362943|ref|YP_002142580.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56128277|gb|AAV77783.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197094420|emb|CAR59936.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 243

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNTAL 224


>gi|271967566|ref|YP_003341762.1| extracellular solute-binding protein [Streptosporangium roseum DSM
           43021]
 gi|270510741|gb|ACZ89019.1| extracellular solute-binding protein [Streptosporangium roseum DSM
           43021]
          Length = 305

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 40/273 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----------------------------ILGDIKK 32
           M +   V+ + ++ L   + + +AS                             +  IK+
Sbjct: 4   MKRMAAVAAVSMVGLSACAGTDSASPAVPGEAKGGDLFAKAPVAAAADILPGSTMEKIKQ 63

Query: 33  RGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           RG L  G +      ++     G+ +GFD D  +AL+  I  +P K++ +   ++ R   
Sbjct: 64  RGELIVGGSLDAPLLSQQNPTTGEVEGFDADMGKALAKYIIGEP-KVKIVNSASETREAL 122

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           L +  +D++ +    T  R   +   F    Y  G    + K    I+    L+G ++  
Sbjct: 123 LSNGTVDVVFQTYTITPERAKQVA--FAGPYYSSGLSLAVRKGTAGIAKPEDLNGKTVIA 180

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            A T     +             + F    E   A +  R D Y  D   L A    +  
Sbjct: 181 GANTPAIPAIKKLAPQAK----IVTFGSDPECMQALKQERGDVYVQDEMLLVANAQKDP- 235

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                ++    +  P    +  GD ++   V+ 
Sbjct: 236 --SVQVVGQPFTTDPYGIGLKHGDEQFKKFVND 266


>gi|222081926|ref|YP_002541291.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726605|gb|ACM29694.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 270

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 83/248 (33%), Gaps = 16/248 (6%)

Query: 1   MYKDFFVS-----ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +  F++     +    IL   +    A  L  IK R  L   ++ G   F    A   
Sbjct: 4   MKRRSFLAGISGALAGATILGVNARQALADTLETIKTRKKLLIAVDLGSPPFGMSDAAMQ 63

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV+  + L++ +      ++ +P+ +  R   L + + DI+  +      R+    
Sbjct: 64  PTGSDVETAKLLAADLGY---PLEIVPVTSPNRVPFLLTSKADIVMASFSVNEERKKV-- 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F              K   I ++  + G  +    G+T +                + 
Sbjct: 119 IDFTDAYGVIQIVVAAPKSANIKTLQDVVGQRLGTTRGSTNDKVATTEA----QGAEMVR 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++    +  A  + + +        + A+          V L  ++  +P A  + +GD 
Sbjct: 175 YDDDATLITALVSGQVNIMASSPQIMAAVNQRRTSDPLEVKL--VLKTNPYAIGLRKGDD 232

Query: 236 EWYNIVSW 243
              + ++ 
Sbjct: 233 ALKSTLNE 240


>gi|317123707|ref|YP_004097819.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315587795|gb|ADU47092.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 334

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 14/235 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74
              S S     +  I +RG L  G++     F          +GFD+D  RA++ ++   
Sbjct: 72  LPASSSITDGSVRAILERGHLTVGVSADTYLFGARDPFTNRIEGFDIDIARAVAQSLLGS 131

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            SK+++  + A +R   L+ +++D+++RN   T  R     +AF    Y  GQ  ++ K 
Sbjct: 132 ASKVRFRVITAADRIEVLEKREVDMVARNMTMTCAR--WEQIAFSSEYYHSGQKLLVAKD 189

Query: 135 K----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                  +++  L G  +C   GT+T   L             +           ++  R
Sbjct: 190 PSGAVPDTTIEDLKGKRVCAPRGTSTLEKLRSV-----KGVEAVPAADHTGCLVLFQQGR 244

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA TGD + L  L      P   V     I+  P      Q D      V+   
Sbjct: 245 ADAITGDDTVLAGLAAQ--DPYTVVSSAPAITDEPYGLGFNQADVYLVRYVNRVL 297


>gi|294629391|ref|ZP_06707951.1| amino acid ABC transporter, amino acid-binding protein
           [Streptomyces sp. e14]
 gi|292832724|gb|EFF91073.1| amino acid ABC transporter, amino acid-binding protein
           [Streptomyces sp. e14]
          Length = 350

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 84/237 (35%), Gaps = 12/237 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN---GDWKGFDVDFCRALSSAIF 72
                + +   +  I++RG+L  G++     +     N   G  +GFD+D    ++  I 
Sbjct: 83  SLAPSAADGPTVAAIRQRGYLSVGVDQNSYRWGYRNPNNASGALEGFDIDLAHRIAEDIL 142

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            D  K+Q+  +   ER  A++S ++D++ R    T   +    +AF    +  GQ  +  
Sbjct: 143 GDGDKVQFRAIPTNERVNAIRSGRVDMVVRTMTITC--DRLDQVAFSAPYFLTGQQVLAP 200

Query: 133 KKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEIDAAYRA 188
           +   I+     L+G  +C   G+T    L+   K   +              +     + 
Sbjct: 201 RTSAITGYDKSLAGKRVCSATGSTAYDHLSADRKNGTLPASTDIGTTVPNQLDCLVRLQL 260

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              DA   D +   +    +       +     +K     A+  G  +    V+   
Sbjct: 261 GEVDAVVTDGALAASQAAQDP---TVQLKGGTFTKEYYGVAMKLGADDLVRQVNRIL 314


>gi|288962583|ref|YP_003452878.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288914849|dbj|BAI76334.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 267

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 78/241 (32%), Gaps = 10/241 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              ++L             A  L  I K   L+  +      F  V  +    G+D+D  
Sbjct: 12  LATAVLAGGFTATAPTHAKADALERIAKEKVLRVAVPQDFPPFGSVGTDLKPVGYDIDAA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++  +    +K++ +P+ +  R   L + ++D++  +      RE    + F      
Sbjct: 72  TLIAKEMG---AKVELVPVTSTNRIPYLTTGKVDLVISSLGKNAEREKV--IDFSTAYAP 126

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              G        +     L+G ++ V  G+  ++ L+        K     +E      +
Sbjct: 127 FYNGVFGPDDIAVEKAEDLNGKTVGVTRGSVEDIELSKIVS---DKVTVRRYEDNNGTIS 183

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A+ + +            A+      P    IL  +I  SP    + + +      V+  
Sbjct: 184 AFLSGQVQLVATGNVVAAAIFDR--NPPRQPILKFLIKNSPCFVGLNKNEGPLLEKVNAI 241

Query: 245 H 245
            
Sbjct: 242 I 242


>gi|229152356|ref|ZP_04280548.1| Arginine-binding extracellular protein artP [Bacillus cereus m1550]
 gi|228630964|gb|EEK87601.1| Arginine-binding extracellular protein artP [Bacillus cereus m1550]
          Length = 259

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNEESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEGLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|197284576|ref|YP_002150448.1| arginine ABC transporter substrate-binding protein [Proteus
           mirabilis HI4320]
 gi|227356758|ref|ZP_03841143.1| arginine ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Proteus mirabilis ATCC 29906]
 gi|194682063|emb|CAR41589.1| arginine ABC transporter, substrate-binding protein [Proteus
           mirabilis HI4320]
 gi|227163048|gb|EEI47983.1| arginine ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Proteus mirabilis ATCC 29906]
          Length = 244

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 27/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F ++L  I L  T+             +  ++         F  + AN    GFD
Sbjct: 1   MKKILFAALLTSITLSATAA-----------DKETIRFATEATYPPFEMIDANNQIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I  +     +   +      +L+ ++ D L    D T  R+    + F  
Sbjct: 50  VDLANAMCEKINAE---CTFTNQSFDSLIPSLKFRRFDALMAGIDITPERQK--QVDFTD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI      IS V+ L G  I VQ GTT +  + +  K        + ++  +
Sbjct: 105 SYYDNSAVFITVTG-KISDVASLKGKQIGVQNGTTHQKFINEQHKE----MKTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R +A  GD + +         P   ++   +   +     LA A+ +G+ +
Sbjct: 160 NAVLDLKNGRIEAIFGDTAVVNEWL--KKNPELGIVGDKVTDPNYFGTGLAIAVRKGNAD 217

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 218 LQDKLNKAL 226


>gi|56413131|ref|YP_150206.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362057|ref|YP_002141694.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56127388|gb|AAV76894.1| cystine-binding periplasmic protein precursor [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093534|emb|CAR58996.1| cystine-binding periplasmic protein precursor [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 266

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 172 DIRTYDDDLTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 230 KGNEDLLKAVDNAI 243


>gi|26246883|ref|NP_752923.1| arginine-binding periplasmic protein 2 [Escherichia coli CFT073]
 gi|117623040|ref|YP_851953.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           APEC O1]
 gi|227884176|ref|ZP_04001981.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           83972]
 gi|237707176|ref|ZP_04537657.1| arginine-binding periplasmic protein 2 [Escherichia sp. 3_2_53FAA]
 gi|300817040|ref|ZP_07097259.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 107-1]
 gi|300824001|ref|ZP_07104123.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 119-7]
 gi|300901226|ref|ZP_07119328.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 198-1]
 gi|300921109|ref|ZP_07137493.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 115-1]
 gi|300924469|ref|ZP_07140439.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 182-1]
 gi|300929331|ref|ZP_07144804.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 187-1]
 gi|300935049|ref|ZP_07150081.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 21-1]
 gi|300991846|ref|ZP_07179671.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 200-1]
 gi|300993464|ref|ZP_07180406.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 45-1]
 gi|301020622|ref|ZP_07184697.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 69-1]
 gi|301051212|ref|ZP_07198041.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 185-1]
 gi|301325868|ref|ZP_07219301.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 78-1]
 gi|309795345|ref|ZP_07689763.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 145-7]
 gi|331646128|ref|ZP_08347231.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli M605]
 gi|331672399|ref|ZP_08373190.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA280]
 gi|26107283|gb|AAN79466.1|AE016758_70 Arginine-binding periplasmic protein 2 precursor [Escherichia coli
           CFT073]
 gi|115512164|gb|ABJ00239.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           APEC O1]
 gi|226898386|gb|EEH84645.1| arginine-binding periplasmic protein 2 [Escherichia sp. 3_2_53FAA]
 gi|227838928|gb|EEJ49394.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           83972]
 gi|300297119|gb|EFJ53504.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 185-1]
 gi|300305456|gb|EFJ59976.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 200-1]
 gi|300355351|gb|EFJ71221.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 198-1]
 gi|300398598|gb|EFJ82136.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 69-1]
 gi|300406578|gb|EFJ90116.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 45-1]
 gi|300411960|gb|EFJ95270.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 115-1]
 gi|300419354|gb|EFK02665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 182-1]
 gi|300459712|gb|EFK23205.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 21-1]
 gi|300462677|gb|EFK26170.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 187-1]
 gi|300523512|gb|EFK44581.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 119-7]
 gi|300530392|gb|EFK51454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 107-1]
 gi|300847382|gb|EFK75142.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 78-1]
 gi|308120995|gb|EFO58257.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 145-7]
 gi|315287308|gb|EFU46719.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 110-3]
 gi|315292535|gb|EFU51887.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 153-1]
 gi|315299391|gb|EFU58643.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 16-3]
 gi|324009774|gb|EGB78993.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 57-2]
 gi|324013022|gb|EGB82241.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 60-1]
 gi|324015942|gb|EGB85161.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 117-3]
 gi|331044880|gb|EGI17007.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli M605]
 gi|331070594|gb|EGI41958.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA280]
 gi|332104598|gb|EGJ07944.1| arginine-binding periplasmic protein 2 [Shigella sp. D9]
          Length = 260

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 18  MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|330806945|ref|YP_004351407.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375053|gb|AEA66403.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 266

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 12/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  IK  G +K G+      F+ V  +G   GF+V+F  AL+  +      ++ 
Sbjct: 27  AVAGEQLQKIKDAGEIKIGLEGTYPPFSFVDDSGKLTGFEVEFSEALAKELGVK---VKL 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138
                     AL+SK++D +      +  R+     +            +  K     I 
Sbjct: 84  QTTPWAGILAALESKRLDAVVNQVTISEERKKKYDFSEPYTVSGIQALVLTKKADELNIK 143

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L G  + V  GT  E  +    KA         ++         R  R D    D 
Sbjct: 144 KAADLDGKKVGVGLGTNYEQWV----KAEVPGAQVKTYDDDPTKFQDLRVGRIDTILIDR 199

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A         +  +  +  +  S+     A+ +G+ E    V+   
Sbjct: 200 LAALEY---AKKAKDTTVTSEAFSRQESGIALRKGEPELLAAVNKAI 243


>gi|229056619|ref|ZP_04196025.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH603]
 gi|228720688|gb|EEL72246.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH603]
          Length = 265

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D +T +        L   + ++  I+      S       
Sbjct: 170 EIVGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 229 KGSDKLVQEVNKAL 242


>gi|91209894|ref|YP_539880.1| arginine-binding periplasmic protein 2 [Escherichia coli UTI89]
 gi|91071468|gb|ABE06349.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           UTI89]
          Length = 260

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 18  MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|25011543|ref|NP_735938.1| hypothetical protein gbs1501 [Streptococcus agalactiae NEM316]
 gi|76787172|ref|YP_330074.1| polar amino acid ABC transporter amino acid-binding protein
           [Streptococcus agalactiae A909]
 gi|24413082|emb|CAD47160.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76562229|gb|ABA44813.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus agalactiae A909]
 gi|319745365|gb|EFV97676.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus agalactiae ATCC
           13813]
          Length = 268

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 93/275 (33%), Gaps = 16/275 (5%)

Query: 1   MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   + IL L+ +       S++  +   ++K+G L   ++     F     V     
Sbjct: 1   MSKKIILGILSLLSVVTLVACGSSDKQLQDKVEKKGKLVLAVSPDYAPFEFKALVNGKDK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D++  +A++  +     K++  P++      +LQ+ + D+      +T  R     
Sbjct: 61  VVGADIELAQAIADEL---HVKLEVSPMSFDNVLSSLQTGKADMAISGLSYTKERAKV-- 115

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      ++ K      +S+  L G  I VQ G+  E      FK      H 
Sbjct: 116 YDFSKPYYTTENAVLVRKSDLGKYTSIESLKGKKIAVQKGSIEEGVSKKSFK----NSHV 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +    + E  +  ++ + +A   +          N                  A A+ + 
Sbjct: 172 VSLTAMGEAISELKSGKVEAVDLEKPVAEGYLAQNPDLVLAKFALKTGEGDAKAVALPKD 231

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
             +    V+     +   ++  +   +  +++ + 
Sbjct: 232 SGKMLKTVNKVIKRLEKEDKYKVYISDAAKLTGNQ 266


>gi|239928548|ref|ZP_04685501.1| glutamate binding protein [Streptomyces ghanaensis ATCC 14672]
 gi|291436873|ref|ZP_06576263.1| glutamate binding periplasmic protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291339768|gb|EFE66724.1| glutamate binding periplasmic protein [Streptomyces ghanaensis ATCC
           14672]
          Length = 282

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 8/219 (3%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  +  GI     G  +    G + GFDVD    ++  +  D  +I++    + +R   L
Sbjct: 41  KKKITIGIKFDQPGLGQKTPQG-YAGFDVDVATYVAKKLGYDEKQIEWKESKSADRETML 99

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151
           Q   +D ++     T  RE    + F        Q  ++      I S   L+ A +C  
Sbjct: 100 QRGDVDFIAATYSITPEREA--KVDFAGPYLLAHQDVLIRADDDSIKSPEDLNDAKLCSV 157

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+T+   + D       K     +          +    DA T D S L      +   
Sbjct: 158 TGSTSAQNVKDKLA---PKAQLQPYPTYSACLPGLQNGAVDALTTDDSILAGYAAQDQFK 214

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +  +    ++       + +G ++    ++    AMV+
Sbjct: 215 GKFKLGGFKLTNENYGIGVKKG-SDLKAKINDALEAMVS 252


>gi|163941904|ref|YP_001646788.1| extracellular solute-binding protein [Bacillus weihenstephanensis
           KBAB4]
 gi|229134969|ref|ZP_04263775.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-ST196]
 gi|163864101|gb|ABY45160.1| extracellular solute-binding protein family 3 [Bacillus
           weihenstephanensis KBAB4]
 gi|228648471|gb|EEL04500.1| Arginine-binding extracellular protein artP [Bacillus cereus
           BDRD-ST196]
          Length = 259

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N     + + +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKANGENKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+      F
Sbjct: 61  FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTAERK--NNADF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I S+  L G  + VQ G+  E    ++ K  + K      +R
Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKTE 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|288572816|ref|ZP_06391173.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568557|gb|EFC90114.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 253

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 82/251 (32%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L     +S    AS +        L  G  +    F          GFD
Sbjct: 1   MKKVLILCMAVLSFFVLSSTVLAASAMDK----DTLLVGTESTFKPFEFRNEENKIVGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++S +      ++ + +       +L + +ID+++     T  R   +   F  
Sbjct: 57  IDLINTIASKMGKK---VEIVDMAFDALIPSLLTGKIDMIAAGMSATPERAKRVA--FSD 111

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y     F +   +  I+S+  L G  + VQ GT     + D F +         +++ 
Sbjct: 112 VYYTTPDAFTVKADRTDIASLDDLDGKKVSVQLGT-----IQDAFVSKRKGLEVKRYQKT 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           ++        R D    D +     K       ++     +    P+     A A+   D
Sbjct: 167 DDAFREVLLGRVDVACVDGTVT---KENLKNNKDYTDTLKVAFFHPISQTGMALAMGLED 223

Query: 235 TEWYNIVSWTH 245
            E    V+   
Sbjct: 224 MELKKNVNAAL 234


>gi|161502924|ref|YP_001570036.1| cystine transporter subunit [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864271|gb|ABX20894.1| hypothetical protein SARI_00983 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 282

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +++RG L  G+      F+    +
Sbjct: 17  MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVRERGTLLVGLEGTYPPFSFQGDD 76

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L SK+ID++      + +R+  
Sbjct: 77  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK- 132

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + ++L G  + V  GT  E  L  +        
Sbjct: 133 -KYDFSTPYTVSGVQALVKKGNEGTIKTAAELQGKKVGVGLGTNYEEWLRQHV----QGV 187

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L         +  D  S+     A+ 
Sbjct: 188 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 245

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    V    
Sbjct: 246 KGNEDLLKAVDNAI 259


>gi|160935367|ref|ZP_02082749.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441725|gb|EDP19425.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC
           BAA-613]
          Length = 278

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 11/228 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             ST    L  + K   +  G       F     +G   G+DVD    L+ ++  +   +
Sbjct: 34  GNSTQTGTLQKVLKERKMTVGCILSFPPFGYKSEDGTPMGYDVDMIHELADSLGVE---V 90

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + + + A  R  +L++ ++D +  N   TL R  +  + F       G+  ++ K  GI+
Sbjct: 91  EIVEVTADARIPSLETGKVDAVFGNFTRTLER--AQKIDFSNPYVVAGERLLVKKGSGIN 148

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +V  L+G  + V  G+T     A+     N     + FE   +   A +  +C  +  D 
Sbjct: 149 TVDDLTGKKVAVTKGSTN----AELMATLNPNAEVVFFETSADALQAVKNGQCATFLEDS 204

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +            V+   +IS    A  + +GD +W N ++   +
Sbjct: 205 --NFQQYQAAQNDDLEVVGDSLISLEYNAIGVKKGDQDWLNYLNLFIF 250


>gi|28870091|ref|NP_792710.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213966881|ref|ZP_03395031.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301381564|ref|ZP_07229982.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061680|ref|ZP_07253221.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302131523|ref|ZP_07257513.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28853337|gb|AAO56405.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213928203|gb|EEB61748.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|330877719|gb|EGH11868.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330965183|gb|EGH65443.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 277

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 13/236 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80
            +A  L D+  +  L CG+   +  F+       +  G DVD C+AL+  +  +   ++ 
Sbjct: 20  AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMGVE---LEL 76

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            PL+ + R   ++  ++D++  N  +T  R  +  + F    Y   +  ++         
Sbjct: 77  KPLSVEARIPEVKMGRVDVIFANLAYTRSR--ADQIQFSDPYYIAKETLVVRAANADQPK 134

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           S      I    G+T+E ++            P+ F+       A + ++      +   
Sbjct: 135 SFFKDKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMT 188

Query: 201 LYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              L         E  I  + ++  P+   + QG+  +   V+ + YAM  A E+ 
Sbjct: 189 AIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGEID 244


>gi|298530982|ref|ZP_07018383.1| extracellular solute-binding protein family 3 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509005|gb|EFI32910.1| extracellular solute-binding protein family 3 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 253

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 92/258 (35%), Gaps = 22/258 (8%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
           M +  FF+ +L  + +F + F+++            L   ++T  V F    ++ G++ G
Sbjct: 1   MKRSGFFLCLLLGVFMFMSMFASS-------LHAKKLTVAVDTAFVPFEFRDSDTGEYVG 53

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A++  +  +       P++      ALQ+  +D        T  RE    + F
Sbjct: 54  FDIDLWDAIADRLGVEYE---LQPMDFSGIVPALQTGSVDAALAGITITAEREKV--VDF 108

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   ++ K    I     + G +I V+ GTT+         A       + F 
Sbjct: 109 SHPYYDSGLSIMVMKDNDEIQGPEDIEGRTIAVRTGTTSADHAPRLNPA-----DIVQFP 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            +E      RA R DA   D   +     T        + P  +           G +E 
Sbjct: 164 NIEAAYMEVRAGRVDAAMHDTPNVLYYIQTAGDDQVKAVGP-RMQSQSYGIGFPLG-SEL 221

Query: 238 YNIVSWTHYAMVTAEELG 255
            N V+     +V + E  
Sbjct: 222 RNDVNVAFLELVDSGEYA 239


>gi|312958493|ref|ZP_07773013.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311287036|gb|EFQ65597.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 266

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 91/247 (36%), Gaps = 16/247 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K + ++ L  +         +A  + D  +RG L+ G     V F      G   GF+
Sbjct: 1   MIKRYCLAALICVAALIQHNLAHAGAIDDAARRGVLRVGTTPTYVPFEMTDKQGRIVGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   ++S A+      ++ + +   E    L +K+ D++      T  R  +L L F  
Sbjct: 61  IDLLASMSQALGVK---LELVSVPYTELLPGLMAKKFDLIGSGMTVTQER--NLKLNFSD 115

Query: 121 ITYFDGQGFIMH-----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                GQ  ++H     K   +  +   +G  I V  GTT E        A       + 
Sbjct: 116 SFIVVGQTVLLHPSLLGKVSSVEDLDD-AGYRIAVTEGTTGEAVAQRLLGAA----RLLS 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F   EE        + DA+  D           +  SE + L    +  PLA  + +GD 
Sbjct: 171 FATPEEGVRQVVRGQADAFIYDAPYNLIALSRPEN-SELLALEQPFTFEPLAFGVKKGDF 229

Query: 236 EWYNIVS 242
           +  N ++
Sbjct: 230 DSLNWIN 236


>gi|302560614|ref|ZP_07312956.1| sugar-binding protein [Streptomyces griseoflavus Tu4000]
 gi|302478232|gb|EFL41325.1| sugar-binding protein [Streptomyces griseoflavus Tu4000]
          Length = 345

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 79/242 (32%), Gaps = 17/242 (7%)

Query: 16  FFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67
             +    +   + +IK R      L  G++     +     NG      +GFD+D    +
Sbjct: 69  TLSPSDADGRTIEEIKNRKGEKRKLIVGVDQNSYRWGYRDPNGGESGTLEGFDIDLVHRI 128

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  I  D   IQ+  +   +R  A+Q+ ++D++ R        +    +AF    +  GQ
Sbjct: 129 AEDILGDRDAIQFKAIPTDQRIPAIQAGRVDMVVRTMTINC--DRIKDVAFSAPYFKTGQ 186

Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183
             +  K   I    + L+   IC   G+T    L    KA  +              +  
Sbjct: 187 QVLAPKSAPIEGYDETLADQEICTATGSTAYAKLEADKKAGRLPESTGIGTTVPNQLDCL 246

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +   +    +       +  +  +      A+ +   +    V+ 
Sbjct: 247 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGEAFTTEYYGVAMRKDADDMVRRVNR 303

Query: 244 TH 245
             
Sbjct: 304 IL 305


>gi|110804857|ref|YP_688377.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 5 str. 8401]
 gi|110614405|gb|ABF03072.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 5 str. 8401]
          Length = 243

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 83/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVISKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +  +      L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDQQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|87303445|ref|ZP_01086233.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           WH 5701]
 gi|87282093|gb|EAQ74055.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           WH 5701]
          Length = 299

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 9/225 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQY 80
            S+L  +   G L  G +     FA     G   G+ +D    +   I      P K++ 
Sbjct: 25  GSLLQSVAASGVLVGGTSRDAFPFAYQNEEGQLVGYSIDMMNLIREEIERQTGRPIKLKL 84

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL+  +R  +L+S  ++++   + +T  R+    + F       G   ++ +  G+SS 
Sbjct: 85  VPLDTDQRLSSLESGAVNLVCDASSFTWSRDE--KVDFSVSYGITGTQLLVPRGSGLSSP 142

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  + V   TT+ L +A    A       ++ +  +E   A +  R DA+  D   
Sbjct: 143 ESLAGKRVGVLPRTTSVLAVASRQPAA----SLVLLKDRQEGYEALQQGRIDAFADDGML 198

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           LYA        +   +  D  S+  +A  + Q ++ +  +V    
Sbjct: 199 LYAWLQRQGGQAPFKVSADTYSREGIACMVPQNNSSFQRVVDLAL 243


>gi|331015352|gb|EGH95408.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 277

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 13/236 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80
            +A  L D+  +  L CG+   +  F+       +  G DVD C+AL+  +  +   ++ 
Sbjct: 20  AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMGVE---LEL 76

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            PL+ + R   ++  ++D++  N  +T  R  +  + F    Y   +  ++         
Sbjct: 77  KPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIAKETLVVRAANADQPK 134

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           S      I    G+T+E ++            P+ F+       A + ++      +   
Sbjct: 135 SFFKDKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMT 188

Query: 201 LYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              L         E  I  + ++  P+   + QG+  +   V+ + YAM  A E+ 
Sbjct: 189 AIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGEID 244


>gi|212640610|ref|YP_002317130.1| glutamine ABC transporter periplasmic-binding component
           [Anoxybacillus flavithermus WK1]
 gi|212562090|gb|ACJ35145.1| ABC-type glutamine transport system, periplasmic-binding component
           [Anoxybacillus flavithermus WK1]
          Length = 265

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++ +++         +S          +    +     F  +   G+  GFD
Sbjct: 1   MKKGIIATLVFMLMFALVGCG--SSTEKTATTEKKITVVTDASFAPFEYMN-KGEIVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+           +   +     F A+Q K  D+           +      F  
Sbjct: 58  VDLLKAVMKEAG---LAYELKNIGWDPLFAAIQGKTADMAVSGITIND--DRKQTYDFSI 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      ++ K   I S   L G  + VQ GTT +  +       N   +   FE   
Sbjct: 113 PYFESTHMILVKKGSSIKSAKDLQGKVVGVQNGTTGQEAVEKILGKEN--PNIKKFENTV 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239
                      +A   D +        N          P+            +G +E   
Sbjct: 171 VAIMDLLNGGVEAVVTDNAVANEYVKNNPDAKIVAFEDPEHFESEFYGFMFPKG-SELKQ 229

Query: 240 IVSWTHYAMV 249
            V      ++
Sbjct: 230 KVDEALKKVI 239


>gi|322832150|ref|YP_004212177.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rahnella sp. Y9602]
 gi|321167351|gb|ADW73050.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rahnella sp. Y9602]
          Length = 243

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  ++                ++  +      F  V ++   +GFD
Sbjct: 1   MKKLVIAAVLATVSLSASAA-------------DTIRFAMEASYPPFEFVDSSNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +          +L+ ++ D +    D T  R+  +   F  
Sbjct: 48  VDLANAMCKEM---QATCTFTNQAFDSLIPSLKFRRFDAVISGMDITPERQKQVA--FTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI H  +  + V+ L G  + +Q GTT +  L D           + ++  +
Sbjct: 103 PYYDNSAIFIAHSGQF-TDVAALKGKRVGMQNGTTHQKYLMDKHPE----ITAVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N         I       + L  A+ Q +TE  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNKNLAAVGDKITDPTYFGTGLGVAVRQNNTELL 217

Query: 239 NIVSWTH 245
             ++   
Sbjct: 218 TKLNDAL 224


>gi|170769131|ref|ZP_02903584.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia albertii TW07627]
 gi|170122203|gb|EDS91134.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia albertii TW07627]
          Length = 248

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +G     + V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDALRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|324112658|gb|EGC06634.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
          Length = 243

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ K+ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFKKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|21223285|ref|NP_629064.1| bifunctional protein [Streptomyces coelicolor A3(2)]
 gi|20520711|emb|CAD30902.1| putative bifunctional protein [Streptomyces coelicolor A3(2)]
          Length = 670

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 75/227 (33%), Gaps = 6/227 (2%)

Query: 32  KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            R  L  G      G +    + G W GFDVD   AL+  +    +++ +  +    R  
Sbjct: 417 ARKRLTIGAKEDQPGLSFYNKDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRAS 476

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-IC 149
            L++ ++D++  +   T  RE   G++F    Y  G   ++ K      + +        
Sbjct: 477 KLKNGEVDLVVASYSMTPEREKRDGISFVGPYYKAGSSLLVRKNSAKYDLGEAVDVKRNR 536

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+  T  + T AD  +           +  +E        R   Y      +       +
Sbjct: 537 VEVCTARDSTYADRLEEDGYTTGKWQPDTYKECVERLLDKRSSVYAVASDDVLLAGYAQN 596

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIV----SWTHYAMVTAE 252
            P+   +LP      P   A+ + D    + V             AE
Sbjct: 597 DPAHLKLLPSGAGTEPYGVAMRKDDPLLKSKVCSGLREILAGKEWAE 643


>gi|302388265|ref|YP_003824087.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
 gi|302198893|gb|ADL06464.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
          Length = 299

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 107/301 (35%), Gaps = 48/301 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFST---------------------NASI----------LGD 29
           M K   +++    +   T+  T                       S           +  
Sbjct: 2   MKKMLSLALAFAAVASLTACGTKAPETTTAAPAETTAKEGTGTAGSTEAAGKGLAADVQK 61

Query: 30  IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD-------DPSKIQYL 81
           I  RG LK G    +  F+    A G+++GF+ D    ++  IF        +   +++ 
Sbjct: 62  IIDRGVLKVGCKADIPKFSLQNTATGEYEGFEDDLAYEIAGTIFGCTAAEAKEKKLVEFQ 121

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + AK R   L++ +ID++      T  R+ +    F    Y D  G +++K+ GI S+ 
Sbjct: 122 GVTAKTRGPLLENGEIDLVIATFTITPERKET--YNFSTPYYTDAVGLLVNKESGIDSIE 179

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDIS 199
            L G  I V   +TT+     Y     +K +P    F+    +  A    + D ++ D +
Sbjct: 180 DLDGKIIGVAQSSTTKDGFKKYVDEKGLKVNPQFQEFDGYPALAQALATKQIDCFSVDRA 239

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L            + IL D  ++     A  + +T     V     +M++   L   Q 
Sbjct: 240 ILAGYVN-----DGNQILQDRFAEQDYGVAAAKENTGLAAFVDEKITSMLSDGSLKALQD 294

Query: 260 N 260
            
Sbjct: 295 Q 295


>gi|228919287|ref|ZP_04082657.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228840394|gb|EEM85665.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 264

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDIEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVTKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|158340821|ref|YP_001521989.1| ABC transporter, periplasmic substrate-binding protein
           [Acaryochloris marina MBIC11017]
 gi|158311062|gb|ABW32675.1| ABC transporter, periplasmic substrate-binding protein
           [Acaryochloris marina MBIC11017]
          Length = 319

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 100/271 (36%), Gaps = 20/271 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKI 78
           +  ++L  I++   +  G N   + FA     G ++G+ ++  + + + +         +
Sbjct: 43  SAETVLEKIERTSTVTAGTNKNTLPFAFQDEQGQFQGYSIEMLKQIQAQLSKKLGKEINL 102

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + + L   ER   L + ++DI+   + +T  R+    + F       G   ++ + K   
Sbjct: 103 ELVALTPNERIPKLVAGEVDIVCDASSYTWERDK--DIDFSVSYGLTGTRLLIKQGKKAW 160

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L    I   AGTT E+ +         K   IV     +   A      DA+  D 
Sbjct: 161 EPEMLVNQKIAAVAGTTNEIAIRR----AQPKAQIIVLPDHTQGYKALEQGTVDAFAADG 216

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
             L     T+  P +  ++    S+  +A  + + ++++ N V+++    +     G   
Sbjct: 217 ILLEGWLQTSQNPEDFTVVG-YFSREGIACMVPENNSKFVNQVNYSLVRFMEGYLKG--- 272

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
                  K+       R+ G +    + + L
Sbjct: 273 -------KEPYVKTFDRWFGPEAKVPLTQDL 296


>gi|145299602|ref|YP_001142443.1| ABC-type histidine/lysine/arginine/ornithine transporter,
           periplasmic binding protein [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142852374|gb|ABO90695.1| ABC-type histidine/lysine/arginine/ornithine transporter,
           periplasmic binding protein [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 257

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 24/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +   +   +  +         K+   ++ G+      F+  + +G+ KGFD
Sbjct: 1   MNKLMLATAIVTALSSGSLMA---------KEWKEVRIGVEGAYPPFSWTEPSGEVKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +     K   +  +      AL S++ D +    D T  R+    + F  
Sbjct: 52  IDIANALCAEM---KVKCTLVKQDWDGIIPALLSRKYDAIIATMDITEERKK--KVDFTQ 106

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F   K   +    + + G ++ VQ  T+ +  + D F           +   
Sbjct: 107 KYQHIPARFAAKKGTDVQLDKAFMDGKAVAVQRATSMDTYITDNFP----NATIKRYGTA 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +E     ++ R D    D +A+    L  +       +   ++           A+ + D
Sbjct: 163 DEAYLDLKSGRVDYVLADSAAITDGLLKKEGGDGFEFVGPKLTDPKWFGEGAGIAVRKAD 222

Query: 235 TEWYNIVSWTHYAM 248
            +     +    A+
Sbjct: 223 KDLKEKFNTAILAL 236


>gi|104784119|ref|YP_610617.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas entomophila L48]
 gi|95113106|emb|CAK17834.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Pseudomonas entomophila L48]
          Length = 253

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 18/250 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK FF++    +++   + +              L+ GI      F    A+G   GFD 
Sbjct: 4   YKKFFLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGQVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +    + +  +      AL +K+ D +  +   T  R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CEVVTSDWDGIIPALNAKKFDFIVSSLSITDERK--QAVDFTDP 107

Query: 122 TYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y + Q FI   K    +  + L G +I  Q  T     L D        +   +++  E
Sbjct: 108 YYSNKQQFIAPKKVDFKTDRASLKGKTIGTQRATQAATWLDDNGGLDG-DFKVNLYDGQE 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R DA   D  A Y    +            +     +  A+ +GD E  N 
Sbjct: 167 NAYLDLTSGRVDAILADKYANYDWLKSKAGQDYEFKGDPVNESDKVGIAVRKGDNELRNK 226

Query: 241 VSWTHYAMVT 250
           ++     +V 
Sbjct: 227 LNAALKEIVA 236


>gi|229101614|ref|ZP_04232337.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-28]
 gi|228681856|gb|EEL36010.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-28]
          Length = 265

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMIANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +        R D +T +        L   + ++  I+      S       
Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|76788144|ref|YP_329665.1| polar amino acid ABC transporter amino acid-binding protein
           [Streptococcus agalactiae A909]
 gi|76563201|gb|ABA45785.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus agalactiae A909]
          Length = 277

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55
                  I  L ++  ++   +   +  I      +K   +  G +   V       +GD
Sbjct: 5   KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 64

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          +++ P+N   +   L +  ID++      T  R     
Sbjct: 65  YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 119

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           +AF      + Q  +      I+S+  + G  +  Q+G++         D  K       
Sbjct: 120 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 179

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + ++   +     + +R D    D                +  +              +
Sbjct: 180 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 239

Query: 233 GDTEWYNIVSWTHY 246
            D      ++    
Sbjct: 240 VDRRLIEKINKAFK 253


>gi|323976755|gb|EGB71843.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TW10509]
          Length = 243

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|16759800|ref|NP_455417.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764251|ref|NP_459866.1| arginine transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167992143|ref|ZP_02573241.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168230797|ref|ZP_02655855.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168236835|ref|ZP_02661893.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168240771|ref|ZP_02665703.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168263590|ref|ZP_02685563.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168466508|ref|ZP_02700370.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168819946|ref|ZP_02831946.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194451374|ref|YP_002044920.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194472996|ref|ZP_03078980.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194735976|ref|YP_002113983.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197264800|ref|ZP_03164874.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198245831|ref|YP_002214854.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|204929825|ref|ZP_03220846.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205352139|ref|YP_002225940.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|213021407|ref|ZP_03335854.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
 gi|213052700|ref|ZP_03345578.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213418750|ref|ZP_03351816.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
 gi|213428039|ref|ZP_03360789.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213580628|ref|ZP_03362454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213609524|ref|ZP_03369350.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213647845|ref|ZP_03377898.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|238913407|ref|ZP_04657244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289804213|ref|ZP_06534842.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
 gi|289825016|ref|ZP_06544379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25296354|pir||AG0607 arginine-binding periplasmic protein 1 precursor [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16419398|gb|AAL19825.1| arginine transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502093|emb|CAD05329.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|194409678|gb|ACF69897.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194459360|gb|EDX48199.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194711478|gb|ACF90699.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195630902|gb|EDX49488.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197243055|gb|EDY25675.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197290097|gb|EDY29454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197940347|gb|ACH77680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|204320819|gb|EDZ06020.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205271920|emb|CAR36763.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205329600|gb|EDZ16364.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334641|gb|EDZ21405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205339789|gb|EDZ26553.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205343109|gb|EDZ29873.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205347815|gb|EDZ34446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|261246145|emb|CBG23948.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992652|gb|ACY87537.1| arginine transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|312911917|dbj|BAJ35891.1| arginine ABC transporter substrate binding protein ArtI [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320085164|emb|CBY94951.1| Arginine-binding periplasmic protein Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321223251|gb|EFX48320.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322616364|gb|EFY13273.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322619614|gb|EFY16489.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322622690|gb|EFY19535.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322628602|gb|EFY25389.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322631539|gb|EFY28295.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322637066|gb|EFY33769.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322641735|gb|EFY38371.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322644472|gb|EFY41012.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322650067|gb|EFY46484.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322654140|gb|EFY50463.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322658055|gb|EFY54322.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322663529|gb|EFY59731.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322670265|gb|EFY66405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322671501|gb|EFY67623.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322676857|gb|EFY72924.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322682782|gb|EFY78801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322686461|gb|EFY82443.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|323196085|gb|EFZ81248.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323196769|gb|EFZ81913.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323202952|gb|EFZ87986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323208992|gb|EFZ93929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323211897|gb|EFZ96725.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323215171|gb|EFZ99916.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323222374|gb|EGA06752.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323223890|gb|EGA08189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323229849|gb|EGA13972.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323233074|gb|EGA17170.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323240809|gb|EGA24851.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323243126|gb|EGA27146.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323248668|gb|EGA32596.1| putative ABC transporter arginine-biding protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251669|gb|EGA35536.1| putative ABC transporter arginine-biding protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323257343|gb|EGA41041.1| putative ABC transporter arginine-biding protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323261931|gb|EGA45497.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
 gi|323267947|gb|EGA51426.1| putative ABC transporter arginine-biding protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323271986|gb|EGA55401.1| putative ABC transporter arginine-biding protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 243

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNTAL 224


>gi|25010991|ref|NP_735386.1| hypothetical protein gbs0937 [Streptococcus agalactiae NEM316]
 gi|23095391|emb|CAD46596.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 276

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55
                  I  L ++  ++   +   +  I      +K   +  G +   V       +GD
Sbjct: 4   KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 63

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          +++ P+N   +   L +  ID++      T  R     
Sbjct: 64  YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           +AF      + Q  +      I+S+  + G  +  Q+G++         D  K       
Sbjct: 119 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + ++   +     + +R D    D                +  +              +
Sbjct: 179 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 238

Query: 233 GDTEWYNIVSWTHY 246
            D      ++    
Sbjct: 239 VDRRLIEKINKAFK 252


>gi|254718966|ref|ZP_05180777.1| extracellular solute-binding protein [Brucella sp. 83/13]
          Length = 293

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 77/252 (30%), Gaps = 20/252 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F     C +I+ F +           ++   L  G       F  +  +G   GFDVD
Sbjct: 33  RGFKRIAACAVIVGFAAIGAA-----RAEEPLKLVIGTEGAYPPFNFINPDGSLSGFDVD 87

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RAL   +    ++  ++         ALQ+ + D    +   T  R+    + F    
Sbjct: 88  IARALCDEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 142

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y    G    K   I   +   L+G +I VQ  TT        F           +   E
Sbjct: 143 YNTPLGVAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEQVF----TDSTIKAYPTAE 198

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236
           E        R DA   D   L     T D     +       D I    +  A  +G  E
Sbjct: 199 EYRLDLANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDAIHGVGVGVAFKKGRPE 258

Query: 237 WYNIVSWTHYAM 248
                +    A+
Sbjct: 259 LVEKFNAAIKAI 270


>gi|283796770|ref|ZP_06345923.1| extracellular solute-binding protein, family 3 [Clostridium sp.
           M62/1]
 gi|291075658|gb|EFE13022.1| extracellular solute-binding protein, family 3 [Clostridium sp.
           M62/1]
          Length = 302

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 84/287 (29%), Gaps = 47/287 (16%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28
           M K  F  +    ++F  T+ STNA                                   
Sbjct: 1   MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60

Query: 29  ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                 + K  G     G +        V  +G++ GFD++    ++  +          
Sbjct: 61  EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG---LTFVPQ 117

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+    + + L+S  ID +      T   +      +      + Q  ++ +  GI S +
Sbjct: 118 PIAWDAKNMELESGNIDCIWNGFTMTGREDE---YTWSEPYMENSQVVVVLEDSGIESTA 174

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  + VQA ++ E  L +  +                          DA   D   +
Sbjct: 175 DLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD--VI 232

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            A      R     IL D ++    A    +G+    + V      M
Sbjct: 233 VAGYQLQQRDGGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEM 279


>gi|297243524|ref|ZP_06927456.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis AMD]
 gi|296888569|gb|EFH27309.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis AMD]
          Length = 255

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 9/218 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  ++ GI     G      +G + GFDVD  + ++  +     +I +    +K+R   L
Sbjct: 12  KKVIRIGIKFDQPGIGFK-KSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETML 70

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151
           Q+  +D++  +   T  R+    + F    +  GQ  ++ K +  +S  + L G  +C  
Sbjct: 71  QNGDVDMIVASYSITDARKKM--VTFAGPYFIAGQDLLVRKDEHKVSGPNDLDGKRLCSV 128

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +G+T+ + + + + +   K   +      E   A  +   DA T D   L  L   +   
Sbjct: 129 SGSTSAIAIKERYSS---KVQLMQQPGYAECATALFSGIVDAVTTDDIILAGLATASR-- 183

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
               ++    +       I +G+T     ++     M+
Sbjct: 184 GRLKLVNKPFTAEYYGIGIKKGNTGLAKKINAALKDMI 221


>gi|166032314|ref|ZP_02235143.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC
           27755]
 gi|166028037|gb|EDR46794.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC
           27755]
          Length = 296

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 93/262 (35%), Gaps = 31/262 (11%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-------------------ILGDIKKRGFLKCGINT 42
            K   ++ +        +  +++S                    L +IKK G +  G+ +
Sbjct: 7   KKLITLATVVASTFALVACGSSSSDDSKGSDSSAKKDSGTVYRTLDEIKKDGTINIGVFS 66

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               F  V  NG+++G+DV F   +   +      + ++   A  R   LQ+ ++D++  
Sbjct: 67  DKNPFGYVDENGEYQGYDVYFANRIGEDLGVK---VNFVSTEAANRIEYLQTGKVDLILA 123

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLA 161
           N   T  R     + F         G +      I S+    S   + V +GTT E  L 
Sbjct: 124 NFTVTDERAE--EVDFALPYMNVALGVVSPDSNVIKSLDKWNSKDQMIVISGTTAETYLT 181

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           +    +        ++       A       A+  D + + A           V + ++ 
Sbjct: 182 E----NYPDIPLQKYDSYATAKNALENGNGVAWANDNTEVIAFA--LQNKGYTVGISELG 235

Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243
           +K  +APA+ +G+    + V+ 
Sbjct: 236 NKDTIAPAVSKGNDTLLDWVNE 257


>gi|325063352|gb|ADY67042.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 278

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 84/251 (33%), Gaps = 13/251 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
           +++   +     +    A  L  I     L+C     +V FA       +  GFDVD C 
Sbjct: 6   LTLTVALAGTALASPAAADQLDTIMANKVLRCATFADVVPFAAPDPKTREMAGFDVDLCN 65

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +          P++ + R   ++  ++DI   N  +T  R   +   F    Y  
Sbjct: 66  AIAKELGVKAEV---KPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQ--FSDPYYLA 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            +  I+         S   G  +    G+T+E+++         K  P+ F+       A
Sbjct: 121 KEMLIVPVDDAGKKKSDYEGQRVASTKGSTSEMSI------KLNKSEPLTFQDTASAYLA 174

Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            +  +      +          +  +     ++ + +   P+   + + +      ++  
Sbjct: 175 VQQGKARGMVANTMTTTKFVNESKTKGKPMRMIEEPMLYQPIGVGMAKDNPALTAKINEV 234

Query: 245 HYAMVTAEELG 255
              +  + E+ 
Sbjct: 235 LRTLDASGEIN 245


>gi|284007899|emb|CBA73838.1| arginine ABC transporter, substrate-binding protein [Arsenophonus
           nasoniae]
          Length = 247

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 25/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ILC + L   + +              ++         F  + AN +  GFD
Sbjct: 1   MKKSLLAIILCSLSLPILATTKE-----------TIRFATEATYAPFESIDANNNIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +   +   +      +L+ ++ D L    D T  R+    + F  
Sbjct: 50  IDLANAICKKL---DANCTFTHQSFDSLIPSLKMRRFDALIAGIDITPERQK--QVNFTD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   I+ +S L G  I VQ GTT +  +    K        + ++  +
Sbjct: 105 TYYNNSATFIAVK-NKINKISLLKGKKIGVQNGTTHQKYIIQQHKE----MQAVPYDNYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD +       T    +   +   +   +     LA A+ +G+  
Sbjct: 160 TAILDLQNGRIDAVFGDTAVTTEWLKTKGNENLAAVGEKVTDANYFGVGLAIAVRKGNKT 219

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 220 LLDKLNKAL 228


>gi|229061836|ref|ZP_04199167.1| Arginine-binding extracellular protein artP [Bacillus cereus AH603]
 gi|228717445|gb|EEL69112.1| Arginine-binding extracellular protein artP [Bacillus cereus AH603]
          Length = 259

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N     + + +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLLSISFALILIVSMFSACSNGEEKANGENKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+      F
Sbjct: 61  FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNADF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I S+  L G  + VQ G+  E    ++ K  + K      +R
Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKKYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKTE 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|218234758|ref|YP_002365196.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus B4264]
 gi|229148756|ref|ZP_04277006.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           m1550]
 gi|218162715|gb|ACK62707.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus B4264]
 gi|228634764|gb|EEK91343.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           m1550]
          Length = 264

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|313902716|ref|ZP_07836114.1| extracellular solute-binding protein family 3 [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467013|gb|EFR62529.1| extracellular solute-binding protein family 3 [Thermaerobacter
           subterraneus DSM 13965]
          Length = 293

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 78/228 (34%), Gaps = 15/228 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKI 78
           S   S+L +IK+RG++    +               +  GFD+D  +A++  +  +   +
Sbjct: 58  SGEKSLLDEIKERGYMTFATDGAYPPMEFPDPENPSELIGFDIDLGKAIAEKLGVEHRAV 117

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGI 137
               ++       L+S + D++  + + T  R+      F           +     KGI
Sbjct: 118 V---VDWDGILAGLESGRYDVVMSSMNITEERQK--SADFVQYFEMGQMIVVAKGNPKGI 172

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S+  L G  I VQ GTT E        A         F+   +        R DA   D
Sbjct: 173 HSLDDLKGKVIAVQIGTTNEEIARGIEGA-----TVKTFQTFPDALKEVHVGRADATILD 227

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                           +  + +   ++P+  A+ +G+ +    +    
Sbjct: 228 EPVARYYANIEGDK--YEFVGEPFERAPVGIAVAKGNEDLVQAIQKAL 273


>gi|303248475|ref|ZP_07334733.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
 gi|302490095|gb|EFL50015.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
          Length = 271

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 85/258 (32%), Gaps = 21/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50
           M +   +  L  + L        ++           L  I +RG L  G+      F  V
Sbjct: 1   MVRFIRIISLAFVALTMCCGPAVSATTPFDIYEGSNLRKIVQRGTLVVGMELKFWPFEYV 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+  GFDVD  + L+  +      ++   +       AL + +ID++      TL R
Sbjct: 61  DKEGNPVGFDVDIAKTLADRLGVK---LEIKDMEWTGLIPALTAGKIDLIISGISGTLER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHN 168
             S+       T          +   + +V  L   G  + V+ GTT +L     F    
Sbjct: 118 AKSITFTSPYFTTGLCALLSAKRAGDVKNVDALNAPGRVLAVKTGTTADLVATKKFTKA- 176

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  ++          A R DA+  D  ++   K     P     +    +  P   
Sbjct: 177 ---TINRYKDETACVQEVVAGRADAFFYDQISIA--KHHKQNPEATKAILKPFTYEPFCI 231

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A+ +GD +W+  +     
Sbjct: 232 ALQKGDFDWWQWLEMYLT 249


>gi|301157472|emb|CBW16962.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
          Length = 243

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D +         + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKYPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNTAL 224


>gi|254758427|ref|ZP_05210454.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Australia 94]
          Length = 265

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGYGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|228963946|ref|ZP_04125081.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228795797|gb|EEM43270.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 260

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|229171631|ref|ZP_04299206.1| Extracellular solute-binding protein family 3 [Bacillus cereus MM3]
 gi|228611777|gb|EEK69024.1| Extracellular solute-binding protein family 3 [Bacillus cereus MM3]
          Length = 265

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSSPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +        R D +T +        L   + ++  I+      S       
Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 229 KGSDKVVQEVNKAL 242


>gi|22537110|ref|NP_687961.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 2603V/R]
 gi|22533971|gb|AAM99833.1|AE014235_6 amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 2603V/R]
          Length = 276

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55
                  I  L ++  ++   +   +  I      +K   +  G +   V       +GD
Sbjct: 4   KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 63

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D   A+          +++ P+N   +   L +  ID++      T  R     
Sbjct: 64  YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172
           +AF      + Q  +      I+S+  + G  +  Q+G++         D  K       
Sbjct: 119 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + ++   +     + +R D    D                +  +              +
Sbjct: 179 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 238

Query: 233 GDTEWYNIVSWTHY 246
            D      ++    
Sbjct: 239 VDRRLIEKINKAFK 252


>gi|30260991|ref|NP_843368.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Ames]
 gi|47526143|ref|YP_017492.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49183836|ref|YP_027088.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis str. Sterne]
 gi|65318268|ref|ZP_00391227.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bacillus anthracis str.
           A2012]
 gi|75761725|ref|ZP_00741666.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|165871941|ref|ZP_02216583.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0488]
 gi|167635930|ref|ZP_02394238.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0442]
 gi|167638898|ref|ZP_02397172.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0193]
 gi|170687588|ref|ZP_02878804.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0465]
 gi|170708288|ref|ZP_02898733.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0389]
 gi|177653896|ref|ZP_02935968.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0174]
 gi|190566744|ref|ZP_03019661.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035161|ref|ZP_03102567.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus W]
 gi|206967580|ref|ZP_03228536.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
 gi|218895896|ref|YP_002444307.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|218902065|ref|YP_002449899.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|227816277|ref|YP_002816286.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CDC 684]
 gi|228899528|ref|ZP_04063784.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis IBL 4222]
 gi|228906600|ref|ZP_04070476.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis IBL 200]
 gi|228919694|ref|ZP_04083056.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228926025|ref|ZP_04089106.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229120486|ref|ZP_04249733.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           95/8201]
 gi|229602873|ref|YP_002865431.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0248]
 gi|254682948|ref|ZP_05146809.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254725736|ref|ZP_05187518.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A1055]
 gi|254734362|ref|ZP_05192075.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254739990|ref|ZP_05197682.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Kruger B]
 gi|254753329|ref|ZP_05205365.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Vollum]
 gi|30254440|gb|AAP24854.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Ames]
 gi|47501291|gb|AAT29967.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49177763|gb|AAT53139.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. Sterne]
 gi|74490779|gb|EAO54054.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|164712372|gb|EDR17907.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0488]
 gi|167513028|gb|EDR88400.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0193]
 gi|167528747|gb|EDR91506.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0442]
 gi|170126809|gb|EDS95691.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0389]
 gi|170668401|gb|EDT19148.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0465]
 gi|172081124|gb|EDT66201.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0174]
 gi|190562296|gb|EDV16264.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|195992225|gb|EDX56187.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus W]
 gi|206736500|gb|EDZ53647.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
 gi|218539124|gb|ACK91522.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH820]
 gi|218543043|gb|ACK95437.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|227007853|gb|ACP17596.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. CDC 684]
 gi|228663071|gb|EEL18664.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           95/8201]
 gi|228833737|gb|EEM79293.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228840048|gb|EEM85327.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228853149|gb|EEM97927.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis IBL 200]
 gi|228860118|gb|EEN04522.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis IBL 4222]
 gi|229267281|gb|ACQ48918.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           anthracis str. A0248]
          Length = 265

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|228937646|ref|ZP_04100283.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228970535|ref|ZP_04131185.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228977105|ref|ZP_04137506.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis Bt407]
 gi|228782553|gb|EEM30730.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis Bt407]
 gi|228789122|gb|EEM37051.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228822020|gb|EEM68011.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326938142|gb|AEA14038.1| cystine-binding protein [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 264

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEQVNKALDEII 239


>gi|229009852|ref|ZP_04167072.1| Amino acid ABC transporter, solute binding protein [Bacillus
           mycoides DSM 2048]
 gi|228751470|gb|EEM01276.1| Amino acid ABC transporter, solute binding protein [Bacillus
           mycoides DSM 2048]
          Length = 264

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESATSSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     LQSK+ D +  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|200389730|ref|ZP_03216341.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|199602175|gb|EDZ00721.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 245

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 3   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 50  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219

Query: 239 NIVSWTH 245
              +   
Sbjct: 220 QKFNTAL 226


>gi|30062342|ref|NP_836513.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 2457T]
 gi|56479746|ref|NP_706740.2| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 301]
 gi|30040587|gb|AAP16319.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 2457T]
 gi|56383297|gb|AAN42447.2| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 301]
 gi|281600183|gb|ADA73167.1| Arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2002017]
 gi|313650233|gb|EFS14645.1| arginine-binding periplasmic protein 2 [Shigella flexneri 2a str.
           2457T]
          Length = 243

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVISKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|307328497|ref|ZP_07607672.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
 gi|306885909|gb|EFN16920.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
          Length = 351

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 82/242 (33%), Gaps = 16/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66
                 S +   +  IK R         L  G++     +       GD  GFD+D  RA
Sbjct: 75  ASLRPSSASGPAIKRIKNREVNGHKLNKLIAGVDQNSYRWGYRDPATGDLTGFDIDLVRA 134

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  IF DP  + +  +   +R  ALQ  ++D++ R        +    +AF    +  G
Sbjct: 135 IAEDIFGDPDAVIFRTIPTSQRIKALQQGKVDVVVRTMTINC--DRIKDVAFSTAYFQAG 192

Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEID 183
           Q  ++     I+  ++ L G  +C   G+T E  L   D    H             +  
Sbjct: 193 QQVLVADDSSITGYNKTLRGKRVCTAQGSTAEAELDKPDTGAEHLGAIKVKPVPNQLDCL 252

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +  + DA   D +        +       ++    +      A+ + D +    V+ 
Sbjct: 253 VRLQLGQVDAVITDNALAAGQAAQDP---SVKLVGSRFTDEFYGVAMNKDDDDLVRRVNK 309

Query: 244 TH 245
             
Sbjct: 310 VL 311


>gi|212705002|ref|ZP_03313130.1| hypothetical protein DESPIG_03070 [Desulfovibrio piger ATCC 29098]
 gi|212671554|gb|EEB32037.1| hypothetical protein DESPIG_03070 [Desulfovibrio piger ATCC 29098]
          Length = 246

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 22/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +++  L+++     +              L    + G      +       G+ 
Sbjct: 1   MIRKLTLALCFLVLMSSAVAA------------KTLVVAGHCGYPPMEYLNDKKVPTGYS 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+ + ++     D   +++  +     F  L S   DIL+ +T  T  R+ +    F  
Sbjct: 49  IDYIKEVAKRAGFD---MKFRDVAWDGIFAGLASGNYDILASSTTITPERQKT--FDFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  +M K K I S++ L G ++  Q G T    L       N+      ++ + 
Sbjct: 104 PYYGVVQAVVMAKGKKIDSLAGLKGLTVGSQIGITGVFVLQ----KANVGAKIKEYDDIG 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYN 239
                  A R DA   D           +  +    +  +          + +G+TE   
Sbjct: 160 LAFEDLAAGRIDAVIADDPVAKFYANKREDFAGKFSVAYLHKDPEYFGFCVRKGETELVK 219

Query: 240 IVSWTHYAM 248
            ++    AM
Sbjct: 220 RINKAIAAM 228


>gi|323467040|gb|ADX70727.1| Glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus helveticus H10]
          Length = 272

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 86/233 (36%), Gaps = 10/233 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L       N ++   +K+   +  G+      F       G  +GF++D   AL+  + 
Sbjct: 19  ALIACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +   ++   A  R   L++  ID +      T  R     + F    +  G   ++ 
Sbjct: 79  GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVDFSKPYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I +V  L+G ++    GTT    +  +          + ++   +  +A +A++  
Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVDDVHKFAPKA----RVLQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A T D   L  +    + P  + ++  + + +P   A+ +G  +  + ++   
Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYNNAPYGIAVNKGQKDMVDHINKAL 242


>gi|323526379|ref|YP_004228532.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323383381|gb|ADX55472.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 260

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 90/255 (35%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+  L  + L   + +              ++ G++T    F    A G+  GFD
Sbjct: 1   MKLRVFLGALAAVCLPLAASADTGKT---------IRFGVDTSYPPFEAKSARGELIGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +    +K  ++  +      AL++++ D +  N+  T   + S  + F  
Sbjct: 52  IDLGNAICAKL---NAKCMWVENSFDGMIPALEARKFDAI--NSSMTKSEQRSKAIDFSN 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   +  ++     +  +   L G  + VQ G+T E     ++ +       + ++  
Sbjct: 107 KLYSPVEALVVKGGSPLAPTAESLHGKRVGVQQGSTQEAYARKHWGSKG--VEVVPYQTQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
           +++       R DA            L   +  ++        K        ++  + +G
Sbjct: 165 DQVWNDLVTGRIDAALAFAPQAEGGFLKTPQGRDYGFARGPAIKDDSIFGPGVSIGVRKG 224

Query: 234 DTEWYNIVSWTHYAM 248
           D    + ++    ++
Sbjct: 225 DKALLDAINSAIDSI 239


>gi|317492652|ref|ZP_07951079.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919402|gb|EFV40734.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 260

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L ++  +S                L+ G +     F+     G   GFD
Sbjct: 1   MKKQVLAVSLVLAMVGSSSVFAAVP--------DHLRVGTDPTYAPFSSKNPQGQLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    ++  ++  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLAKELCKRI---NTQCTFVESDFDALIPSLKAKKIDTIISSLSITEKRQKEIA--FTE 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   I  ++  L G  + V  G+T E     +++   +    + ++  
Sbjct: 108 KLYAADSRLVAAKGSPIQPTLESLKGKHVGVLQGSTQETYANQHWRPQGVD--VVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R DA   D  A     L      ++      +  + +        + + D
Sbjct: 166 DLIYADLAAGRIDAAFQDEVAASEGFLKQPVGKDYAFAGPSVKDNAIFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            +          A+  A +        ++ +K   + +V
Sbjct: 226 ADLKV-------ALDKAFDSMRKDGTYDKFAKKYFDFNV 257


>gi|110668634|ref|YP_658445.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           substrate-binding protein [Haloquadratum walsbyi DSM
           16790]
 gi|109626381|emb|CAJ52840.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           substrate-binding protein [Haloquadratum walsbyi DSM
           16790]
          Length = 300

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 16/222 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     F     +G+  GFDVD  +A+           ++ P +      +L + 
Sbjct: 64  VVIGSDIPYRPFEYETTSGELTGFDVDIAQAVFEDQLG--VNYEFKPTSFDSIIPSLNNG 121

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
              I+         R+    + F    +   Q  I+     ISS   L G  + VQ GTT
Sbjct: 122 NFRIIMSAMTINDTRDE--KVDFSDPYFTAYQTIIVRADSSISSRGDLEGTVVGVQKGTT 179

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----- 210
                 +     +       ++++     A +  +  A   D +         D      
Sbjct: 180 GANAAEELQSDFDGNIELNRYDQIPAAFQALKNGQVSAVINDNTVNAEFASQEDNIEFIE 239

Query: 211 -------PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    +       ++      A  + D+E+   V    
Sbjct: 240 GEGAAVEAGQDAPPYLTLTVENYGIAFREDDSEFLERVDEAL 281


>gi|331676648|ref|ZP_08377344.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli H591]
 gi|331075337|gb|EGI46635.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli H591]
          Length = 260

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 18  MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITSER--SKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|288905591|ref|YP_003430813.1| amino acid transporter, amino acid-binding protein [Streptococcus
           gallolyticus UCN34]
 gi|288732317|emb|CBI13887.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus gallolyticus UCN34]
          Length = 279

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAE---VK 51
           M        L +++      S   S         DIK +G L   +N     F     V 
Sbjct: 1   MKVSKLFGGLAVVVASLFLLSACGSSSSEDTSVSDIKDKGTLVVALNPEFAPFEFKTLVD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G DV+  +A++  +  D   +++  ++      +LQS + DI       T  R+
Sbjct: 61  GKDTIVGADVEIAKAIAEELGVD---VKFSSMSFNNVLASLQSGKADIAISGISATEERK 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
                 F    Y      ++ K      +    L G S+  Q G+  E   ++       
Sbjct: 118 K--AYDFSDPYYEAENVVLIRKTDIDKYTDTDSLDGLSVGTQKGSIQETVASEQL----T 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +   +  E+    +  + +A   +          N   +   I          A A
Sbjct: 172 GAKVVSLTQNSEMINELKNSQIEAVVLEKPIAEGYVANNSDLTISDITLTSDDADAYAVA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +G T+    V+     +  + ++ 
Sbjct: 232 LPKGSTKLTKKVNKVIKELKESGKID 257


>gi|206968146|ref|ZP_03229102.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus AH1134]
 gi|206737066|gb|EDZ54213.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus AH1134]
          Length = 264

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +     +  + +       + S  +S      ++   +  ++     F   + +G   
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSTNGEK-EFRYAMSGLYKPFNYKENDGKLV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++
Sbjct: 60  GFDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114

Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G   F+  K   ISS   L G  I V   +T +  +A              +
Sbjct: 115 FSNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +  AI + D E
Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 227 MVEKVNKALDEII 239


>gi|77456603|ref|YP_346108.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77380606|gb|ABA72119.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 265

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 90/250 (36%), Gaps = 15/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +       +  A  + D  KRG LK G++   + F      G+  GF+
Sbjct: 1   MKK-YLSMLLVGVTALVAVNAAQAGAIDDAVKRGSLKVGMDPTYMPFEMTNKRGEIIGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ A+      ++ +         AL + + D++      T  R  +L L F  
Sbjct: 60  VDILKAMTKAMGVK---LELVSTGYDGIIPALMTDKFDMIGSGMTLTQER--NLRLNFSE 114

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     I  + GTT E+                 +
Sbjct: 115 PFIVVGQTLLIRKELEGTIKSYKDLNTADYRITSKLGTTGEMVAKKLISKAKYHG----Y 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D                 V L    +  PLA  + +GD +
Sbjct: 171 DNEQEAVLDVVNGKADAFIYDAPYNVVAVNKVGAGK-LVFLDKPFTYEPLAFGLKKGDYD 229

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 230 SLNFINNFLH 239


>gi|306829759|ref|ZP_07462948.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus mitis ATCC 6249]
 gi|304428110|gb|EFM31201.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus mitis ATCC 6249]
          Length = 271

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 79/254 (31%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K        L  +   +  ++       +  IK++G L    +     F     V    
Sbjct: 4   KKWILAVCSMLASMILVACQSSTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              F    Y +   F++ K        +S L+ A+I  Q GT  E  + +          
Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     +A + DA   D     +    N       +   +      A AI +
Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDIVVASVNLTMKDGEANAVAIKK 234

Query: 233 GDTEWYNIVSWTHY 246
             ++   +V     
Sbjct: 235 DQSDLKAVVDKVIQ 248


>gi|228906127|ref|ZP_04070016.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis IBL 200]
 gi|228853536|gb|EEM98304.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis IBL 200]
          Length = 264

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|110633915|ref|YP_674123.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110284899|gb|ABG62958.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 261

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             ++R  LK G       F  + A+G+ +GFD+D  RAL   +  +    +++       
Sbjct: 24  QAQERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIARALCEEMNAE---CEFVTQEWDGM 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGA 146
             ALQ+ + D +  +   T  R+    + F    Y      ++ K   I   +   L+G 
Sbjct: 81  IPALQAGKFDAIIASMSITDERK--QQVDFTEKYYNTPPAIVVAKDSDIAGVTKEDLAGR 138

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +I  QA TT        F+         ++   EE        R DA   D+  L     
Sbjct: 139 TIGAQASTTHGNFAEATFQE----SEVKLYPTAEEYKLDMTNGRLDAVVDDVIVLQDWLS 194

Query: 207 TNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAM 248
           T        +L  +          +  AI +G+ E     +    A+
Sbjct: 195 T-PDGECCKVLGTLTPVEEIYGEGIGIAIRKGEDELREKFNAAIQAI 240


>gi|55981140|ref|YP_144437.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Thermus thermophilus HB8]
 gi|55772553|dbj|BAD70994.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Thermus thermophilus HB8]
          Length = 254

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 11/223 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +IK+ G ++ G       F          GF+VD   A++  +   P   +++  +   
Sbjct: 24  EEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKP---RWIAQSFDT 80

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
             + L   + D +  +   T  R     + F    Y  G   +  K     +   L G  
Sbjct: 81  LLIQLNQGRFDFVIASHGITEERAR--AVDFTNPHYCTGGVIVSRKGGP-RTAKDLPGKV 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ GTT                    ++R  +      A R DA+  D        + 
Sbjct: 138 VGVQVGTTYMEAAQKIPGIK----EVRTYQRDPDALQDLLAGRIDAWITDRFV-AKEAIK 192

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +    + + +++ +  +A A+ +G+    + ++     ++ 
Sbjct: 193 ERKLENTLQVGELVFQERVAMAVAKGNKGLLDALNRALAELMQ 235


>gi|294814954|ref|ZP_06773597.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|326443325|ref|ZP_08218059.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|294327553|gb|EFG09196.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
          Length = 329

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 79/242 (32%), Gaps = 18/242 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+ +G ++ G +           +G   G D D   AL   +       ++       
Sbjct: 70  QAIRDKGVVRVGSDIAYPPVEFKDDSGATTGIDPDIAAALGKELGVK---FEFQNGTFDT 126

Query: 88  RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMH--KKK 135
               L+SK+ DI       T  R          ++  G+ F    +  G        K +
Sbjct: 127 LITGLRSKRYDIAMSAMTDTKDRQNGVDSETGKKVGEGVDFVD-YFTAGVSIYTPKGKDQ 185

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI--VFERVEEIDAAYRAHRCDA 193
           GI + + L G  I VQ GT +E       K    K       F+   E     RA   DA
Sbjct: 186 GIKTWADLCGKKIAVQRGTVSEDLAKAENKKCGDKGPIKIEAFDNDLEAQTRLRAGGADA 245

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            + D          +    +  ++ + +  +P   A  + +T+  + V     A++   E
Sbjct: 246 GSADFPVAAYAVQKSGGGKDFQLVGEQVEAAPYGIAFAKDNTQLRDAVKAALDAIIKNGE 305

Query: 254 LG 255
             
Sbjct: 306 YQ 307


>gi|242239703|ref|YP_002987884.1| cationic amino acid ABC transporter periplasmic protein [Dickeya
           dadantii Ech703]
 gi|242131760|gb|ACS86062.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech703]
          Length = 243

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 82/252 (32%), Gaps = 25/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + +  ++                L+         F  V A+    GFD
Sbjct: 1   MKKIILAALLAGLSVSASA-------------TDTLRFATEASYPPFESVDASNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   I    +   +           L+ ++ D +    D T  R     ++F  
Sbjct: 48  IDLANALCKQI---QATCTFSNQAFDSLIPGLKFRRFDAVIAGMDITPER--QQQVSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   I++V+ LSG  + VQ GTT +  L D  K        + ++  +
Sbjct: 103 PYYENSAMFIAQK-DKIANVAALSGKRVGVQNGTTHQKFLLDKHK----DITVVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N         +         L  A+ Q + E  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNQGLAAVGDKVADKDYFGIGLGIAVRQNNDELV 217

Query: 239 NIVSWTHYAMVT 250
              +     +  
Sbjct: 218 KKFNAALNTIKQ 229


>gi|238753777|ref|ZP_04615138.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia ruckeri ATCC 29473]
 gi|238708013|gb|EEQ00370.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia ruckeri ATCC 29473]
          Length = 259

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + +++   T+ S  A++         LK G +     F+   A+G+  GFD
Sbjct: 1   MKKQIL--AISMVLALATASSAFAAVP------KTLKVGTDPTYAPFSSKNASGELVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L + I    +K  ++  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLAKELCNRI---DTKCTFVDSDFDALIPSLKAKKIDAIIASLSITEKRQKEIA--FTD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L+G  I V  G+T E      ++   +    + ++  
Sbjct: 108 KLYAANSRLIAQKSSTIQPTLASLAGKRIGVLQGSTQEAFANALWQPKGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   + R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYADLASGRIDAAFQDEVAASEGFLKQQGGKDYAFAGPSVKDDKYFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A+  A          ++++K   + ++
Sbjct: 226 TELKA-------ALDKAFAEMRKDGTYDKLAKKYFDFNI 257


>gi|227823793|ref|YP_002827766.1| putative extracellular solute-binding protein, family 3
           [Sinorhizobium fredii NGR234]
 gi|227342795|gb|ACP27013.1| putative extracellular solute-binding protein, family 3
           [Sinorhizobium fredii NGR234]
          Length = 309

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 77/253 (30%), Gaps = 14/253 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L+ L   + +   S L ++K  G LK G       F    ANG   GFD
Sbjct: 53  MKLLPTLFAAALVQLAAFAPAEAGSNLDEVKSAGVLKIGTEGTYAPFTYHDANGALVGFD 112

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +        +L          L + + D +      T  R+      F  
Sbjct: 113 VEIGEAVAKRLGVKAE---FLEGKWDGLIAGLDANRYDTVINQVGITEERKK--KYDFSE 167

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+    + I   + L G     Q+ T+    LA+   A       +  +  
Sbjct: 168 PYIASKAVLIVKGDNEEIKDFADLKGKKSA-QSLTSNFGKLAEASGA-----ELVGTDGF 221

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    K          I  +          + + + E   
Sbjct: 222 DQSIQLVLTGRADATINDSLSFLDFKKQKPNA-NVRIAAEKPDADYSGIILRKDEPELLA 280

Query: 240 IVSWTHYAMVTAE 252
            ++    A + A+
Sbjct: 281 AINKAL-AEIKAD 292


>gi|170749711|ref|YP_001755971.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656233|gb|ACB25288.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 280

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 9/247 (3%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             ++  L  +     +  A  +  IKKRG L  G+      F     +G   G + D   
Sbjct: 14  LSALAALSTVALPGRAAAADGVDAIKKRGTLIVGVKADYKPFGFRDPSGTIIGLEPDLAA 73

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L+  +      +  +   +  R   LQ  ++D+L         R   +           
Sbjct: 74  DLAKRLGVKLELVPVV---SANRIEFLQQGKVDLLIATLSDKPERRRVVQAIDPNYYSDF 130

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
               +  K  GI+  +QL G  +C  +G      +A  + A       + F+  E+   A
Sbjct: 131 VNVLL-PKSSGITDWAQLKGKPLCATSGAWYNKDVARTYGA-----EIVAFDGSEKPLFA 184

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   C  Y  D S L    L +D  + + +    I  +P   A+ QG+T     V    
Sbjct: 185 LKQGNCIGYVYDQSMLQGKLLDDDWKANYALPLKGILDAPWMMAVAQGNTTLQAAVEDAT 244

Query: 246 YAMVTAE 252
              +   
Sbjct: 245 KDWMKTG 251


>gi|238920409|ref|YP_002933924.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri
           93-146]
 gi|238869978|gb|ACR69689.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri
           93-146]
          Length = 243

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 85/248 (34%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL  I +  T+                ++         F  + A    +GFD
Sbjct: 1   MKKIIIAAILTGISVSATAAQ-------------TIRFAAEASYPPFEFMDAQNKMQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +   +      +L+ K+ID +  + D T  R+    + F  
Sbjct: 48  VDLANAICQQM---KATCTFSNQSFDSLIPSLRFKRIDAVISSMDITPERQK--QVDFSQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L G  + +Q GTT +  L D          P+ ++  +
Sbjct: 103 PYYDNSALFIAEKG-KVADVAALKGKRVGIQNGTTHQKYLMDKHPE----LTPVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N    P    +       + L  A+ +G+    
Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLL 217

Query: 239 NIVSWTHY 246
              +    
Sbjct: 218 EQFNAALN 225


>gi|212705000|ref|ZP_03313128.1| hypothetical protein DESPIG_03068 [Desulfovibrio piger ATCC 29098]
 gi|212671552|gb|EEB32035.1| hypothetical protein DESPIG_03068 [Desulfovibrio piger ATCC 29098]
          Length = 246

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 83/253 (32%), Gaps = 23/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   +++  L+++     +              L    N        +       G+ 
Sbjct: 1   MFRKLTLTLCALVLMCTPVAA------------KTLVVAGNCAFPPMEFLTDKKVPTGYS 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+   ++        KI +  +     F  L +   DIL+ +T  T  R       F  
Sbjct: 49  IDYIHEIAKRAG---LKITFRDVAWDGIFAGLAAGNYDILASSTTITPER--QQAFDFTI 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  +M K K I+S++ L G ++  Q G T    L    +  N+      ++ + 
Sbjct: 104 PYYGAVQAVVMPKGKKINSLADLKGLTVGSQIGITGVFVL----RKANVGAKIKEYDDIG 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYN 239
                  A R DA   D           +  +    +  +          + +G+TE   
Sbjct: 160 LAFEDLAAGRTDAVICDDPVAKFYANKREDFAGKFSVAYLHKDPEYYGFCLRKGETELLE 219

Query: 240 IVSWTHYAMVTAE 252
            ++    A + A+
Sbjct: 220 RLNKAI-ASMQAD 231


>gi|769794|emb|CAA60105.1| artJ [Escherichia coli K-12]
          Length = 243

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKCIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|227327918|ref|ZP_03831942.1| putative cystine-binding periplasmic protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 255

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   L    L  TS   +A  L  IK  G +K G       +     +G   GFD
Sbjct: 1   MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKIGTEGTYAPYTYHDKSGQLVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +      I+            + +K+ D +      T  R+      F  
Sbjct: 59  VDIGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKERQA--KYDFSK 113

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++      I   S L G     Q+ T+     A  + A       +  +  
Sbjct: 114 PYIDSKAVLVVRGDNTTIKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----EIVPTDGF 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K          I        P A  + +       
Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKQKPDA-NVKIAATSKDGEPSAILVRKDQAPLVE 226

Query: 240 IVSWTH 245
            ++   
Sbjct: 227 ALNKAL 232


>gi|55823399|ref|YP_141840.1| ABC transporter substrate-binding protein, amino acid
           [Streptococcus thermophilus CNRZ1066]
 gi|55739384|gb|AAV63025.1| ABC transporter substrate-binding protein, amino acid
           [Streptococcus thermophilus CNRZ1066]
          Length = 265

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 76/261 (29%), Gaps = 15/261 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K  F ++ L           +       IK+   +     + L  F     V      
Sbjct: 1   MKKFWFMLTALVATCFLVACRGSQGVSTKTIKENKKIVLATESELAPFEFKSLVNGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+   +      +++  ++      ++QS + DI       T  R+     
Sbjct: 61  VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +S   L+  ++  Q G+  E      F         +
Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETVAKKQFSKA----SVV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    ++ +  A   + +        ND  +              A AI +G 
Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLASFNLKSDGSDAYAVAIRKGS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    ++        + +  
Sbjct: 232 DDLLKEINAVIKETKVSGKFD 252


>gi|75759591|ref|ZP_00739678.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218895476|ref|YP_002443887.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus G9842]
 gi|228899077|ref|ZP_04063349.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis IBL 4222]
 gi|74492926|gb|EAO56055.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218542572|gb|ACK94966.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus cereus G9842]
 gi|228860518|gb|EEN04906.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis IBL 4222]
          Length = 264

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + + E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDNKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|302538271|ref|ZP_07290613.1| glutamate binding periplasmic protein [Streptomyces sp. C]
 gi|302447166|gb|EFL18982.1| glutamate binding periplasmic protein [Streptomyces sp. C]
          Length = 270

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 89/251 (35%), Gaps = 11/251 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++  +I L  T+         +      +  GI     G    + +G + GFD
Sbjct: 1   MKVPKAGAVATVIALAATASGCGGEAPKE-----PISIGIKFDQPGIGMREPDGTFTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +    ++I++  + + +R L +Q  ++  ++ +      R     + F  
Sbjct: 56  VDVATYIAKELGYKANEIEFKQVYSSDRELLIQYNEVKFVAASYTINDKR--REKVEFAG 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  ++      I+    L+   +C  +G+T+   +         K   +     
Sbjct: 114 PYFVAHQDLMIRADDNSITKAEDLNNKRLCTVSGSTSAENIRKNLA---PKASVLELGGY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A R +  DA T D S L       +   +  +L   +S       + +GD +   
Sbjct: 171 SECLVAIRDNTADAMTTDNSILAGYAARKENAGKFKLLGLNMSNENYGIGLKKGDNDLQR 230

Query: 240 IVSWTHYAMVT 250
            ++     MV+
Sbjct: 231 KINTAITKMVS 241


>gi|82776110|ref|YP_402457.1| glutamine ABC transporter periplasmic protein [Shigella dysenteriae
           Sd197]
 gi|309786522|ref|ZP_07681145.1| glutamine-binding periplasmic protein [Shigella dysenteriae 1617]
 gi|81240258|gb|ABB60968.1| periplasmic glutamine-binding protein [Shigella dysenteriae Sd197]
 gi|308925585|gb|EFP71069.1| glutamine-binding periplasmic protein [Shigella dysenteriae 1617]
          Length = 248

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 86/247 (34%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L + F  S       +        L    +T  V F   + +  + GFD
Sbjct: 1   MKSVLKVSLAALTLAFAVSSHA----VDK-----KLVVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D       P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T    S+   + D +       A  +G  E  +
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGN-SQFKAVGDSLEAQQYGIAFPKGSDELRD 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|308186225|ref|YP_003930356.1| Arginine-binding periplasmic protein precursor [Pantoea vagans
           C9-1]
 gi|308056735|gb|ADO08907.1| Arginine-binding periplasmic protein precursor [Pantoea vagans
           C9-1]
          Length = 243

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L  T+                ++         F  V A+   +GFD
Sbjct: 1   MKKMVLAALLAGFSLSATAAQ-------------TIRFATEASYPPFEFVDADNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPDREK--QVLFTK 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++SV  L G  + VQ GTT +  LAD     +     + ++  +
Sbjct: 103 PYYDNSALFVAQKG-KVASVEALKGKRVGVQNGTTHQKYLAD----KHSDITIVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N         +       + L  A+  G+T+  
Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKQNAALAAVGDKVTDKAYFGTGLGIAVRTGNTDLQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 TKFNGAL 224


>gi|269797856|ref|YP_003311756.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
 gi|269094485|gb|ACZ24476.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
          Length = 268

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 77/258 (29%), Gaps = 22/258 (8%)

Query: 2   YKDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58
            K       ++    L     S+N            L  G N   V F         + G
Sbjct: 7   KKIILGGCMLVMAASLVGGCGSSNQPT------SNKLIVGTNATFVPFEFKDEKTQDYTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++  RA+   I  D   ++   +       AL +  ID+ +     T  R  S  + F
Sbjct: 61  FDIELIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y +    +      ++S+  L G  I  Q GTT                    F+ 
Sbjct: 116 SSPYYENALAVVYKDGTAVNSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDH 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEW 237
             E     +    DA   D+    A   +   P +H   +    +K  L  AI + +   
Sbjct: 171 SNEALLELQNGGVDATVIDLP--VAQYYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKAL 228

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++     M    E  
Sbjct: 229 QEEINKAIADMKADGEFN 246


>gi|27382317|ref|NP_773846.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27355488|dbj|BAC52471.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 275

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M +      L L  L   + +  A +  +IK+ G LK  +N+             +  G 
Sbjct: 1   MTR--LSHFLSLAALAAVTSAQAAELPAEIKQAGALKLTVNSTYAPMEYRDPATNELVGL 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +     KI +      E   +LQ+K+ D +         R       F 
Sbjct: 59  DIDLANELAKRLGG--LKIVWSETPFAELIPSLQTKRADFIISGISDRASR--RETADFV 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174
                 G  F +       + + L G  +     T+  + +  + K +           +
Sbjct: 115 D-YLQTGPQFFVMADSEAKAATDLCGKKVGTTRSTSFPVEIEKWSKQNCEAAGKPAIQYV 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   ++    +  R DA       L         P ++ I+ +  +K        + D
Sbjct: 174 PGENSIDVRNQLKQGRIDAAVQGSETLP--YAQTQEPGKYRIVGEAFAKGYQGIMFRKDD 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
                +V+    AM+      
Sbjct: 232 AALREVVTEKLTAMIADGAYK 252


>gi|156934694|ref|YP_001438610.1| glutamine ABC transporter periplasmic protein [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156532948|gb|ABU77774.1| hypothetical protein ESA_02529 [Cronobacter sakazakii ATCC BAA-894]
          Length = 262

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 85/249 (34%), Gaps = 21/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 17  KSVFKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 67  LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 121

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 122 YNSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 177

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D ++      A  +G  E    V
Sbjct: 178 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLAGQQYGIAFPKGSDELRTKV 236

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 237 NGALKTLKE 245


>gi|191166156|ref|ZP_03027990.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli B7A]
 gi|190903765|gb|EDV63480.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli B7A]
          Length = 243

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R     ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERRK--QVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|161614845|ref|YP_001588810.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194444543|ref|YP_002040128.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|197248178|ref|YP_002145843.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|161364209|gb|ABX67977.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403206|gb|ACF63428.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|197211881|gb|ACH49278.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|326622607|gb|EGE28952.1| Bacterial extracellular solute-binding protein, family 3
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|326627182|gb|EGE33525.1| Bacterial extracellular solute-binding protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 245

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 3   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 50  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219

Query: 239 NIVSWTH 245
              +   
Sbjct: 220 QKFNTAL 226


>gi|325273128|ref|ZP_08139425.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas sp. TJI-51]
 gi|324101733|gb|EGB99282.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas sp. TJI-51]
          Length = 250

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 22/252 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    +++   + +              L+ GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTDP 107

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K     +    L G  I  Q  T     L D    +       +++  E
Sbjct: 108 YYSNKLQFIAPKNVDFKTDKASLKGKVIGTQRATLAGTYLED----NYPGVDVKLYDTQE 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R D    D    Y    + D  +       ++    +  A+ +GDT+  + 
Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTQLRDN 223

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 224 LNKAL-AEIKAD 234


>gi|295096505|emb|CBK85595.1| L-glutamine-binding protein [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 247

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 83/249 (33%), Gaps = 21/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVTSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 52  LWAAVAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITEERKK--AIDFSDGY 106

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 107 YKSGLLVMVKADNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 162

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T         + D +       A  +G  +  N V
Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGDSLEAQQYGIAFPKGSDDLRNKV 221

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 222 NGALKTLKE 230


>gi|293414141|ref|ZP_06656790.1| arginine ABC transporter [Escherichia coli B185]
 gi|291434199|gb|EFF07172.1| arginine ABC transporter [Escherichia coli B185]
          Length = 243

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|167766389|ref|ZP_02438442.1| hypothetical protein CLOSS21_00894 [Clostridium sp. SS2/1]
 gi|167711798|gb|EDS22377.1| hypothetical protein CLOSS21_00894 [Clostridium sp. SS2/1]
 gi|291560832|emb|CBL39632.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2]
          Length = 268

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 82/255 (32%), Gaps = 16/255 (6%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K     +++     +                L D++ +  L  G+++           
Sbjct: 1   MKKFLVGLLTVALAASMLVGCGKKEEKTKTDNSLKDVQSKKELVLGLDSSFPPMGFTDKK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D  + ++  +     K++  P+N   +   L ++++D L     ++  R   
Sbjct: 61  DNIVGFDIDLAKEVTKRMG---IKLKLQPINWNSKEQELNTEKVDCLWNGVTYSKARAKE 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +          + Q  I+     I S+  ++  +       +T    AD  K        
Sbjct: 118 MLC--SESYMDNHQVLIVPANSKIKSLKDITKDTEVGIQSGSTAADAADSVKELKNS-KI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +     +I         DA   D   + A   T     ++ +L D ++K        + 
Sbjct: 175 KLLADNVQILNDLGHG-LDAAVMDE--VVAKYYTKKDAGKYKVLEDSVAKEKYVIGFRKD 231

Query: 234 DTEWYNIVSWTHYAM 248
           D    N V     AM
Sbjct: 232 DKALCNEVVKQLKAM 246


>gi|16128828|ref|NP_415381.1| arginine binding protein, periplasmic [Escherichia coli str. K-12
           substr. MG1655]
 gi|89107711|ref|AP_001491.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080519|ref|YP_001729839.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|238900119|ref|YP_002925915.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|256023513|ref|ZP_05437378.1| arginine transporter subunit [Escherichia sp. 4_1_40B]
 gi|301027627|ref|ZP_07190947.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 196-1]
 gi|307137488|ref|ZP_07496844.1| arginine transporter subunit [Escherichia coli H736]
 gi|2507363|sp|P30860|ARTJ_ECOLI RecName: Full=ABC transporter arginine-binding protein 1; Flags:
           Precursor
 gi|1651393|dbj|BAA35574.1| arginine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1787085|gb|AAC73947.1| arginine binding protein, periplasmic [Escherichia coli str. K-12
           substr. MG1655]
 gi|169888354|gb|ACB02061.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|238860006|gb|ACR62004.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|260449993|gb|ACX40415.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli DH1]
 gi|299879229|gb|EFI87440.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 196-1]
 gi|309701138|emb|CBJ00436.1| arginine ABC transporter, substrate-binding protein [Escherichia
           coli ETEC H10407]
 gi|315135509|dbj|BAJ42668.1| arginine transporter subunit [Escherichia coli DH1]
 gi|315619867|gb|EFV00386.1| arginine-binding periplasmic protein 2 [Escherichia coli 3431]
 gi|323937967|gb|EGB34229.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1520]
 gi|323969576|gb|EGB64864.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TA007]
          Length = 243

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|94986085|ref|YP_605449.1| extracellular solute-binding protein [Deinococcus geothermalis DSM
           11300]
 gi|94556366|gb|ABF46280.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 253

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 75/214 (35%), Gaps = 14/214 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G LK  +      F      G   GFDVD  +A+++ +   P    ++          LQ
Sbjct: 28  GVLKIAMEGTYPPFTYKDEQGQLSGFDVDIAKAVAAKLGLRPE---FVLTEWSGILGGLQ 84

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQ 151
           + + D++      T  R+ ++G  F     +     I+ K    +  +++ L G  + V 
Sbjct: 85  ANKYDVIVNQVGITPERQKTIG--FSRPYAYSSPQIIVRKGSSFNPKTLADLKGKRVGVG 142

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  E  L           + + +    E  A   A R DA   D   +  L   N+ P
Sbjct: 143 LGSNFEQQLRQA-----GGINVVTYPGAPEYLADLAAGRLDAAYNDRLLVGYLITKNNLP 197

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   I    P+  A  + +T   N ++   
Sbjct: 198 I--KGAGVIGQPEPVGIAFKKTNTALGNAINRAL 229


>gi|319938932|ref|ZP_08013296.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
 gi|319811982|gb|EFW08248.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
          Length = 277

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 80/255 (31%), Gaps = 14/255 (5%)

Query: 1   MY-KDFFVSILCLI-ILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M  K + ++I  LI  L  T+ S             +++  +  G +   V     + NG
Sbjct: 1   MKIKRYVLAICSLISFLLLTACSNVNNPKVDNWSKYQQKKSITIGFDNTFVPMGFEQKNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD+D   A+         K+ + P++   +   L +  ID++      T  R    
Sbjct: 61  QYVGFDIDLANAVFKEYG---IKVNWQPIDWDMKETELTNGTIDLIWNGYSATDERRK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY 171
            + F      + Q  +  K   I+  + +    +  Q G++       +    K     +
Sbjct: 116 KVQFTIPYMKNEQVLVAKKSSNIAKTADMKDKILGAQTGSSGYDEFEAHPELLKNLVKNH 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++   E     +  R D    D               ++ + P        A    
Sbjct: 176 KAAQYQSFTEALIDLQNSRIDGLLIDRVYANYYLKEEGILPDYYVFPAGFDSESFAVGAR 235

Query: 232 QGDTEWYNIVSWTHY 246
           + D +    ++    
Sbjct: 236 KTDKQLVENINQAFK 250


>gi|269138891|ref|YP_003295592.1| amino-acid ABC transporter periplasmic component [Edwardsiella
           tarda EIB202]
 gi|267984552|gb|ACY84381.1| amino-acid ABC transporter periplasmic component [Edwardsiella
           tarda EIB202]
 gi|304558877|gb|ADM41541.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Edwardsiella tarda FL6-60]
          Length = 257

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 83/246 (33%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L L +L   + + ++  L  I+  G +K G       +    A+G   GFD
Sbjct: 1   MMKKTARALLALTLLSGGALAQSSDELAAIQSAGSIKFGTEGTYPPYTYHDASGKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA+++ +   P    ++          L +K+ D +      T  R+      F  
Sbjct: 61  VDIARAVAAKMGLKP---VFVEGRWDGLIAGLSAKRYDAVINQVGITPERQA--KFDFSD 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      + S   L G     Q+ T+    LA+++ A       +  +  
Sbjct: 116 PYVGAKAVLIVRSDNAQLKSFDDLRGQK-AAQSLTSNYAKLAEHYGA-----DLVPTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R  A   D  +    +          ++     ++  A  + +G  +   
Sbjct: 170 NQSLELVISGRAAATLNDNLSYLDFRQHKPNAP-LKVVAVADQRADSAILVRKGQPQLVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 ALNRAL 234


>gi|54025807|ref|YP_120049.1| putative glutamate transporter glutamate-binding protein [Nocardia
           farcinica IFM 10152]
 gi|54017315|dbj|BAD58685.1| putative glutamate transporter glutamate-binding protein [Nocardia
           farcinica IFM 10152]
          Length = 277

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 10/235 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
                  S L   ++ G L  GI     G      +G + GFDV   + ++  +   P  
Sbjct: 23  CGGGDEGSALEHAQE-GKLTIGIKYDQPGLGLRTKDGAYTGFDVAVAQYVAGKLGVQPDG 81

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-G 136
           I +    + +R   +++ Q+D +      T  R+    + F    Y  GQ  ++      
Sbjct: 82  ITFKEAPSAQRETLIENGQVDFVVATYSITDKRKE--KVDFAGPYYIAGQSLLVKADNTD 139

Query: 137 ISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           I+ V  L+G   +C   G+T    + D +           F+       A R    DA T
Sbjct: 140 ITGVESLNGNKKLCSVKGSTPAQNVKDKYAQ---DVQLQEFDTYSLCVEALRNGSVDAVT 196

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D   L      +  P +  ++    +       + +GD E  + ++    AM+ 
Sbjct: 197 TDDIILAGFAAQS--PGQLKVVGQPFTTENYGIGLKKGDQETRDKINDAIEAMIA 249


>gi|304405143|ref|ZP_07386803.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304346022|gb|EFM11856.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 495

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 98/308 (31%), Gaps = 44/308 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--------------LKCGINTGLVG 46
           M K   V IL L ++ F             +  G               L  G +     
Sbjct: 1   MKKSAIVRILALTLIVFILLGVFGPT-DRSRANGATSNASASFCPDGKALVMGTSPDYPP 59

Query: 47  FAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
           +  V A   GD  G D+D  +A++S +      ++   ++      ALQ+ ++D +    
Sbjct: 60  YENVDAKHGGDIVGLDIDIAKAITSKLGCK---LEISAMDFNGLIAALQTHRVDFVMSGM 116

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R+    + F    Y      +  KKK  +++ +L G  + VQ G+T E  +A   
Sbjct: 117 SVTPERKE--NVDFSNPYYAARNTIVSKKKKPFATLQELEGGKVGVQLGSTQETAIAGLK 174

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            A            +  +    +A+R DA   + +        N       ++P      
Sbjct: 175 NAK-----ITKLNTISSLIQELKANRIDAAIVEDAVAIGYIEANAD-LAFTMIPSDDDAE 228

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284
             A A  +G          +  A   AE   +                +  + G  + + 
Sbjct: 229 GYAIAFPKG---------SSLVAPFNAELAELESS-------GEKQKMIDSWFGQHEGAK 272

Query: 285 IGEALGLT 292
            G  L L 
Sbjct: 273 KGNQLNLD 280


>gi|218688597|ref|YP_002396809.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           ED1a]
 gi|331656832|ref|ZP_08357794.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA206]
 gi|218426161|emb|CAR06981.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Escherichia coli ED1a]
 gi|331055080|gb|EGI27089.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli
           TA206]
          Length = 248

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T     +   + D +       A  +G  E  + +
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKI 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|118476114|ref|YP_893265.1| amino acid ABC transporter periplasmic-binding protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|118415339|gb|ABK83758.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 264

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P+ I       +     L++K+ D +  +   T  R     + F
Sbjct: 61  FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDAILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 AEKVNKALDEII 239


>gi|226323072|ref|ZP_03798590.1| hypothetical protein COPCOM_00844 [Coprococcus comes ATCC 27758]
 gi|225208639|gb|EEG90993.1| hypothetical protein COPCOM_00844 [Coprococcus comes ATCC 27758]
          Length = 257

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 84/254 (33%), Gaps = 17/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDW 56
           M K   V + C  +  F +  + +        +      L    N     F     + + 
Sbjct: 3   MKKVISVVLACACVFSFAACGSKSDSSKSDSAKSDKKEKLVMATNAEFPPFEYYDGD-EV 61

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D +F  A++  +  D   ++   +       A+QS + DI +     T   + +  +
Sbjct: 62  VGIDAEFAAAIADKLGMD---LKIEDMAFDSIIPAVQSGKADIGAAGMTVTE--DRATQV 116

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y   Q  I+     I+    L G  I VQ GTT ++   D F       +   F
Sbjct: 117 DFSDSYYTGVQVIIVTDDSDITEPDDLKGKKIGVQQGTTGDIYSTDDFG----DDNVERF 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +  E   A +  + DA   D       K   +      IL     +   A AI +G+ +
Sbjct: 173 NKGMEAVQALQQGKIDAVIIDN---QPAKTFVEENEGLKILETSYVEEDYALAIKKGNDD 229

Query: 237 WYNIVSWTHYAMVT 250
               V+     +  
Sbjct: 230 LVKKVNDAIKELKE 243


>gi|254386082|ref|ZP_05001396.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1]
 gi|194344941|gb|EDX25907.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1]
          Length = 279

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 6/236 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                 ++        K+  +  GI     G      +G + GFDVD    ++  +   P
Sbjct: 20  ATACGGSSDKASDGGAKKDKVVIGIKFDQPGVGLKTPDGKFTGFDVDVATYVAKELGYTP 79

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            +I++    + ER   + +  +  +  +      R+    + F    +   Q  ++    
Sbjct: 80  EQIEFKQAISAERENLISNGDVKFVVASYSINDKRKE--KVDFAGPYFLAHQDLLVRSDD 137

Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+    L+   +C   G+T+   +         +          E      +   DA 
Sbjct: 138 NSITKPEDLNSKKLCSVTGSTSAQNIKTKLA---PEADLKQSAGYSECLTGLESKSMDAL 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           T D S L           +  ++   +S       + +GD E    ++     MV 
Sbjct: 195 TTDNSILAGYAAQEKNKGKFKLVGLNLSNENYGIGLKKGDKELQTKINAALKKMVA 250


>gi|323129194|gb|ADX16624.1| arginine-binding periplasmic protein 1precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
          Length = 245

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 3   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 50  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D +         + ++  +
Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKYPE----ITTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219

Query: 239 NIVSWTH 245
              +   
Sbjct: 220 QKFNTAL 226


>gi|295836167|ref|ZP_06823100.1| glutamate-binding protein [Streptomyces sp. SPB74]
 gi|197695263|gb|EDY42196.1| glutamate-binding protein [Streptomyces sp. SPB74]
          Length = 280

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 75/241 (31%), Gaps = 11/241 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGD 55
           M      + + +++    + S       D           +  GI     G  +   +G 
Sbjct: 1   MKFRKVSAAVAVVLTVGLAASACGKNDDDKASGGSGGGKKITIGIKFDQPGLGQKLPSGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFDVD    ++ A+    ++I +    + +R   L+   +D ++ +   T  RE    
Sbjct: 61  FAGFDVDVATYVAKALGYKTNQIVWKEAKSADRETMLERGDVDFIAASYSITDEREA--K 118

Query: 116 LAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F            +   +K I+    L+   +C   G+T+   +              
Sbjct: 119 VDFAGPYLLAHQDVLVREDEKEINDPKDLNSRKLCSVTGSTSAQNIKKDLAPR---ADLQ 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E          DA T D S L       +   +  +    ++       + +G 
Sbjct: 176 EYGGYSECLTGLENKAVDALTTDDSILAGYAAQKEFQGKFKLAGFKMTNENYGIGVKKGS 235

Query: 235 T 235
            
Sbjct: 236 D 236


>gi|15800615|ref|NP_286629.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 EDL933]
 gi|291281862|ref|YP_003498680.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O55:H7 str. CB9615]
 gi|12513881|gb|AAG55239.1|AE005267_4 arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. EDL933]
 gi|209775328|gb|ACI85976.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775330|gb|ACI85977.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775332|gb|ACI85978.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775334|gb|ACI85979.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775336|gb|ACI85980.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|290761735|gb|ADD55696.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O55:H7 str. CB9615]
          Length = 260

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN    GFD
Sbjct: 18  MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESMDANNQIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T   + S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITP--DRSKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNSRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|299769347|ref|YP_003731373.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter sp. DR1]
 gi|298699435|gb|ADI90000.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Acinetobacter sp. DR1]
          Length = 261

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + L L  +     +         K    ++ G  +    F     +G   GFD
Sbjct: 5   MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +    +K  ++  +      AL++K+ D +  +   T  R     + F  
Sbjct: 56  VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    + + + L G  + VQ GT  E     Y+         + +   
Sbjct: 111 KIYNTPTRMVAKKGSPLLPTAASLKGKRVGVQQGTIQETYAKTYWATKG--VTVVPYPVQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I     + R DA   D   +    L   +      +   +  +       A  + + D
Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFTFVGSNVVDAKTLGVGAAIGLRKED 228

Query: 235 TEWYNIVSWTHYAMVT 250
            +    +     A++ 
Sbjct: 229 ADLKANIDKALAAIIA 244


>gi|296101732|ref|YP_003611878.1| cystine transport system substrate-binding protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295056191|gb|ADF60929.1| cystine transport system substrate-binding protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 266

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+           ++L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F   L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGSIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +   +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    +    
Sbjct: 230 KGNEDLVKAIDSAI 243


>gi|268590211|ref|ZP_06124432.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Providencia rettgeri DSM 1131]
 gi|291314492|gb|EFE54945.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Providencia rettgeri DSM 1131]
          Length = 247

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  T+            ++  ++         F     N    GFD
Sbjct: 1   MKKIILAALLGAVTLSATAA-----------EKETIRFATEATYAPFEMFDKNNQIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +   +      +L+ ++ + L    D T  R     + F  
Sbjct: 50  VDLANAMCEKM---NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITPER--QQQVDFTE 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K+  ISSV QL    I VQ GTT +  + +  K        + ++  +
Sbjct: 105 TYYPNSAEFIAVKE-KISSVDQLKDKKIGVQNGTTHQKYIMEQHK----GMTTVPYDNYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD +            +   +   +         L  A+ +G+ E
Sbjct: 160 SAILDLQNGRIDAVFGDTAVADEWLKAKGNENLAAVGEKVTDPQYFGIGLGIAVRKGNKE 219

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 220 LLDKMNKAL 228


>gi|193069411|ref|ZP_03050366.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli E110019]
 gi|192957364|gb|EDV87812.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Escherichia coli E110019]
          Length = 248

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +    +      +   + D +       A  +G  E  + V
Sbjct: 164 AYMELGTNRADAVLHDTPNIL-YFIKTAGSGQFKAVGDSLEAQQYGIAFPKGSDELRDKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|228476953|ref|ZP_04061593.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
 gi|228251372|gb|EEK10533.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
          Length = 224

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 19/223 (8%)

Query: 2   YKDF----FVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFA 48
            K        S+  L I   TS  T A           +  I KRG L  G+   +  F 
Sbjct: 4   KKILRYLTVASLAILTIFLITSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L       
Sbjct: 64  YYSAKTNTYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIATYTIN 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+ S  +      Y+D  GF++ K  GI+ +S L+G +I V  G +T+  L +Y  A+
Sbjct: 121 DERKASYAI--STPYYYDQIGFLVLKDSGINKISDLNGKTIGVSQGASTKAALQEYASAN 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           N+K++ +      E+  +  AHR DA++ D S L   +    +
Sbjct: 179 NLKFNYVQLGSFPELAVSLYAHRVDAFSVDKSILSGYESKKTK 221


>gi|218779108|ref|YP_002430426.1| extracellular solute-binding protein family 3 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760492|gb|ACL02958.1| extracellular solute-binding protein family 3 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 247

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 76/253 (30%), Gaps = 23/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L + +    + ++             +    ++       V AN D  G+ 
Sbjct: 1   MLKKLMLIALAVSLFACPALASE----------KTIVFATDSTWPPMEFVDANKDIVGYA 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+  A +           +  +     F  L + + D +  +   T  R+    + F  
Sbjct: 51  IDYMNAAAKEAGFKAE---FKAVAWDGIFAGLDAGKYDAICSSVSITEDRKA--SMDFST 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  I+ K   ++S+  L G  +  Q  TT    +               ++ V 
Sbjct: 106 PYFRVKQAVIVPKDSTVTSLKDLVGQKVGSQISTTGTFAV-----KAEEGVISKTYDEVG 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLT---NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  A   D        L         +  ++ +         A+ +G+ E 
Sbjct: 161 LAVEDLFNGRIAAVVCDDPVAANYALQNDRYKGALKIAVVIEAGDVEYYGIAVKKGNKEV 220

Query: 238 YNIVSWTHYAMVT 250
            ++V+    A+  
Sbjct: 221 LDLVNKGIAAVKE 233


>gi|315181506|gb|ADT88419.1| ABC glutamine transporter extracellular solute-binding protein,
           family 3 [Vibrio furnissii NCTC 11218]
          Length = 263

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 90/241 (37%), Gaps = 10/241 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             S+L    L F + +  A  L  ++++G LK  +      F  V  +    G+D+D   
Sbjct: 7   MSSVLMSASLLFGATTAQADQLESVQQKGVLKVAVPQDFPPFGSVGTDLKPHGYDIDMAG 66

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L+  +     K++ +P+ +  R   LQ+ ++D++  +      RE    + F       
Sbjct: 67  YLAKKL---DVKLELVPVTSANRIPYLQTGKVDLVISSMGKNAEREKV--IDFSAAYAPF 121

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             G      + ++S   LSG +I V  G+  +L L+    +         FE      ++
Sbjct: 122 YLGVFGSSDEAVTSAQDLSGKTIGVTRGSVEDLELSKIAPS---DATIKRFEDNNATLSS 178

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + + +          +  +      P++      ++  SP    +++G+      V+   
Sbjct: 179 FLSGQVSLIATGNLVVTEIATRY--PAKAPQTKFLLKNSPCYVGVMKGEDALLKEVNRLI 236

Query: 246 Y 246
            
Sbjct: 237 T 237


>gi|228989958|ref|ZP_04149934.1| Extracellular solute-binding protein family 3 [Bacillus
           pseudomycoides DSM 12442]
 gi|228996155|ref|ZP_04155806.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           Rock3-17]
 gi|229003759|ref|ZP_04161570.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           Rock1-4]
 gi|228757492|gb|EEM06726.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           Rock1-4]
 gi|228763605|gb|EEM12501.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           Rock3-17]
 gi|228769782|gb|EEM18369.1| Extracellular solute-binding protein family 3 [Bacillus
           pseudomycoides DSM 12442]
          Length = 266

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 72/255 (28%), Gaps = 22/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTS---------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K F V  +  + +   +          +T+   L  IKK G    G       F    
Sbjct: 1   MKKLFSVLAVATLAVGIVAGCGKEEKKDTATSQDALQQIKKSGEFVVGTEGTYPPFTFHD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFDV+    ++  +   P    +           L +K+ D+++         +
Sbjct: 61  GSGKLTGFDVELTEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--RED 115

Query: 112 ISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                 F           ++ K     +S + + G +   Q+ T+    LA    A    
Sbjct: 116 RQKKYDFSKPYISSSAALVVAKDKDKPASFTDVKGLT-AAQSLTSNYADLAKKNGAK--- 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 E   +        R D +T +        L   + +   I       S      
Sbjct: 172 --IQGVEGFSQAVELLNTGRVD-FTINDKLSVLNYLQTKKDANIKIAATEKEASQSGFLF 228

Query: 231 IQGDTEWYNIVSWTH 245
            +G  +    V    
Sbjct: 229 RKGSDKLVQEVDKAL 243


>gi|224582740|ref|YP_002636538.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224467267|gb|ACN45097.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
          Length = 245

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 3   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 50  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D     + +   + ++  +
Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMD----KHQEITTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219

Query: 239 NIVSWTH 245
              +   
Sbjct: 220 QKFNTAL 226


>gi|304397041|ref|ZP_07378920.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
 gi|304355190|gb|EFM19558.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
          Length = 243

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 82/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L  T+                ++         F  V A+   +GFD
Sbjct: 1   MKKMVLAALLAGFSLSATAAQ-------------TIRFATEASYPPFEYVDADNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPDREK--QVLFTK 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++SV  L G  + VQ GTT +  L D     +     + ++  +
Sbjct: 103 PYYDNSALFVAQKG-KVASVEALKGKRVGVQNGTTHQKYLTD----KHSDITIVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N         +       + L  A+  G+TE  
Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKQNAALAAVGDKVTDKAYFGTGLGIAVRTGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 TKFNGAL 224


>gi|294102366|ref|YP_003554224.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
 gi|293617346|gb|ADE57500.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
          Length = 251

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 88/257 (34%), Gaps = 17/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  I +F ++    A        +  ++ G  +    F       +  GFD
Sbjct: 1   MKK--LVVLLAFIFVFVSAAGAMA---ESALDKDVIRVGTESTFRPFEFRNVKNEVVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +      ++ +         +L +K+IDI++     T  R     ++F  
Sbjct: 56  IDLINMVAEKLGKK---VEIVDAAFDSLIPSLLTKKIDIIAAGMSATEERAK--RVSFSH 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      ++  ++  I++   L G    VQ GT     + D +           F + 
Sbjct: 111 VYYITPSAVVVKAEETGITAEEDLKGKIATVQMGT-----IQDVYVTQLDLKEVKRFAKT 165

Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           ++        R D A          LK   D       + ++     +A A+ + D ++ 
Sbjct: 166 DDAFREVLLGRADFAVVDGTVTKENLKENKDFTGTLKQVFELRIDKGMALALRKDDPQFL 225

Query: 239 NIVSWTHYAMVTAEELG 255
             V+     +  +  L 
Sbjct: 226 EAVNKALDELKESGTLA 242


>gi|322833009|ref|YP_004213036.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321168210|gb|ADW73909.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 278

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 87/271 (32%), Gaps = 19/271 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  +I    + +  A  L DIK  G +  GI+     +      G+  G+ 
Sbjct: 1   MKK--IALLIAALITAGAAGTAQADTLSDIKSSGKITVGIDPTFPPYEFTNDKGEITGYS 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V   ++ +  +      +++           L S   +    + + T  R     + F  
Sbjct: 59  VAIMQSFAKDLGVK---LEFQKTAFSGILPGLISGSFNAEGSSLNVTAERAK--KVLFTV 113

Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYF----KAHNMK 170
                  G ++ +           S  QLSG S  V++ +  E  L  +     K     
Sbjct: 114 PYSKTVNGVLVREADVKKFSGKTLSPEQLSGLSGAVKSASVPEQLLKGFNETLTKEGKKP 173

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  + +++  +     R D    DIS L  +            + +      +A A 
Sbjct: 174 ITIISVDTLDQTVSTLMTKRADFVFDDISVLAPIVKKYPNKVA--QVGEAGPSQWMAWAT 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            + DT     +S    AM    EL   QK  
Sbjct: 232 RKDDTRLNKAISDHILAMQKDGELTTLQKQY 262


>gi|207856322|ref|YP_002242973.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|206708125|emb|CAR32418.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
          Length = 243

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ + +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DASCTFTNQAFDGLIPSLKFRRFNAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNTAL 224


>gi|261247561|emb|CBG25388.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
          Length = 260

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A G++ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAAIPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257


>gi|294787061|ref|ZP_06752315.1| glutamate-binding protein [Parascardovia denticolens F0305]
 gi|315226711|ref|ZP_07868499.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Parascardovia denticolens DSM 10105]
 gi|294485894|gb|EFG33528.1| glutamate-binding protein [Parascardovia denticolens F0305]
 gi|315120843|gb|EFT83975.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Parascardovia denticolens DSM 10105]
          Length = 286

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 87/255 (34%), Gaps = 11/255 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                I  LI+   T+   +A      K    +  GI     G      NG + GFDVD 
Sbjct: 14  RLLWKICSLILALTTAVGLSACGAVRGKSDHVITIGIKFDQPGLGYK-KNGTYSGFDVDV 72

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            R +++ +     +I ++   +K+R   LQ+  +D++      T  R+ +  + F     
Sbjct: 73  ARYIANKLGYKDYEINWVEAPSKQRETMLQNGDVDMILATYSITDDRKKT--VDFAGPYL 130

Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             GQ  ++ K    I     L G  +C   G+T+   +      ++ K   +      E 
Sbjct: 131 VAGQDLLVRKDNTNIHGPQDLDGKRLCSVTGSTSATVIKQ---KYSNKVQLMEQPSYAEC 187

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG--DTEWYNI 240
             A  +   DA T D   L  L           ++    ++      I +      + + 
Sbjct: 188 ATALFSGIVDAVTTDDIILAGLSANAR--GRLKLVGRPFTQEYYGVGIQKNAKSKAFAHK 245

Query: 241 VSWTHYAMVTAEELG 255
           ++     MV      
Sbjct: 246 INAAINEMVATGAWQ 260


>gi|229159926|ref|ZP_04287933.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           R309803]
 gi|228623665|gb|EEK80484.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           R309803]
          Length = 265

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 74/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNGANI 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +      +        R D +T +        L   + ++  I+      S       
Sbjct: 172 ENVE--GFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|222106267|ref|YP_002547058.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737446|gb|ACM38342.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 278

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/291 (22%), Positives = 99/291 (34%), Gaps = 24/291 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K  F  +L L  L  T  S +A  L  IK RG L  G+      F  +     + KGF
Sbjct: 6   MTKTIFGFVLSLSALVATQASADA-TLDRIKGRGKLTVGVILSGAPFGYIDPKSQEQKGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  +AL+  +      +    +    R   LQ  ++DIL  N  +T  R     L F 
Sbjct: 65  NVDIAQALADDLGVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKV--LDFV 119

Query: 120 P-ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           P      G   ++ K  G+   + L G  +CV  G+     L + + A            
Sbjct: 120 PTPYDRSGGAAVVRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEEYGA-----VVKALPS 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A +   C A     + +  L        +   +P      P    I     E  
Sbjct: 175 QPESLLALQGGNCVAAVHVGATVGLLLQDRPEEWKDYAIPFPTELVPSDSVIWLRKGE-- 232

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
              + T  A+  A +       +   +K +      R L ID      +AL
Sbjct: 233 ---ADTQTALDNAVKKLHVSGKLLDFAKSS------RLLNIDYLEQEHKAL 274


>gi|51244883|ref|YP_064767.1| amino acid ABC transporter, periplasmic substrate-binding protein
           [Desulfotalea psychrophila LSv54]
 gi|50875920|emb|CAG35760.1| probable amino acid ABC transporter, periplasmic substrate-binding
           protein [Desulfotalea psychrophila LSv54]
          Length = 255

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 89/251 (35%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  + L F+  ++    L        +  GI+     FA V  NG   GFD
Sbjct: 6   MSKKLITGLIVTLALSFSLSTSA---LAR-----TVVNGIDANYPPFAYVDKNGVPAGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +     ++ + P+       A+ SK+ID +      T  R+    + F  
Sbjct: 58  VDSMNWIAKHM---DFEVIHKPMEWSTIVQAVASKKIDTVMSGMTITPERKA--QVNFSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I +     F++ K   +++ S L S   +  Q GT+    L    KA         ++  
Sbjct: 113 IYWSVKNVFVVKKDSQLTTDSILASKGRVGYQTGTSDGKWLDKENKAQGWGLQLRQYDSS 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +I +     R  A   +++  +             I  +I        A+   D E   
Sbjct: 173 PQIISEVLNGRLLAGEMNMTPAHDAISK---GVPVKIAGNIGEHEDFGVAVRYDDKELLK 229

Query: 240 IVSWTHYAMVT 250
           I++     ++ 
Sbjct: 230 IINQGLKDLMA 240


>gi|82543348|ref|YP_407295.1| arginine 3rd transport system periplasmic binding protein [Shigella
           boydii Sb227]
 gi|157155628|ref|YP_001462058.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli E24377A]
 gi|157160383|ref|YP_001457701.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli HS]
 gi|170020737|ref|YP_001725691.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|191172082|ref|ZP_03033626.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli F11]
 gi|193064415|ref|ZP_03045496.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli E22]
 gi|193069339|ref|ZP_03050294.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli E110019]
 gi|194428194|ref|ZP_03060737.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli B171]
 gi|194433140|ref|ZP_03065422.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Shigella dysenteriae 1012]
 gi|194438447|ref|ZP_03070537.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli 101-1]
 gi|209918109|ref|YP_002292193.1| arginine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|215485991|ref|YP_002328422.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218553446|ref|YP_002386359.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           coli IAI1]
 gi|218557764|ref|YP_002390677.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli S88]
 gi|218688642|ref|YP_002396854.1| arginine ABC transporter subunit periplasmic-binding protein
           [Escherichia coli ED1a]
 gi|218694334|ref|YP_002402001.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli 55989]
 gi|218699236|ref|YP_002406865.1| arginine ABC transporter subunit periplasmic-binding protein
           [Escherichia coli IAI39]
 gi|218704287|ref|YP_002411806.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           coli UMN026]
 gi|253774110|ref|YP_003036941.1| cationic amino acid ABC transporter periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160975|ref|YP_003044083.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|256021019|ref|ZP_05434884.1| arginine-binding periplasmic protein 2 precursor [Shigella sp. D9]
 gi|260843111|ref|YP_003220889.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O103:H2 str. 12009]
 gi|260854152|ref|YP_003228043.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O26:H11 str. 11368]
 gi|260867033|ref|YP_003233435.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O111:H- str. 11128]
 gi|293404165|ref|ZP_06648159.1| arginine ABC transporter [Escherichia coli FVEC1412]
 gi|293409235|ref|ZP_06652811.1| arginine ABC transporter [Escherichia coli B354]
 gi|293433158|ref|ZP_06661586.1| arginine transport system substrate-binding protein [Escherichia
           coli B088]
 gi|298379948|ref|ZP_06989553.1| arginine ABC transporter [Escherichia coli FVEC1302]
 gi|306812691|ref|ZP_07446884.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           NC101]
 gi|307311752|ref|ZP_07591392.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|312969073|ref|ZP_07783280.1| arginine-binding periplasmic protein 2 [Escherichia coli 2362-75]
 gi|312970984|ref|ZP_07785163.1| arginine-binding periplasmic protein 2 [Escherichia coli 1827-70]
 gi|331656933|ref|ZP_08357895.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA206]
 gi|331662272|ref|ZP_08363195.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA143]
 gi|331667234|ref|ZP_08368099.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA271]
 gi|331682369|ref|ZP_08382988.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli H299]
 gi|81244759|gb|ABB65467.1| arginine 3rd transport system periplasmic binding protein [Shigella
           boydii Sb227]
 gi|157066063|gb|ABV05318.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli HS]
 gi|157077658|gb|ABV17366.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli E24377A]
 gi|169755665|gb|ACA78364.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|190907609|gb|EDV67204.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli F11]
 gi|192928877|gb|EDV82490.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli E22]
 gi|192957292|gb|EDV87740.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli E110019]
 gi|194413754|gb|EDX30033.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli B171]
 gi|194418637|gb|EDX34724.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Shigella dysenteriae 1012]
 gi|194422671|gb|EDX38668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli 101-1]
 gi|209911368|dbj|BAG76442.1| arginine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|215264063|emb|CAS08405.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218351066|emb|CAU96770.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360214|emb|CAQ97764.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218364533|emb|CAR02215.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli S88]
 gi|218369222|emb|CAR16977.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218426206|emb|CAR07030.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli ED1a]
 gi|218431384|emb|CAR12262.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222032589|emb|CAP75328.1| Arginine-binding periplasmic protein 2 [Escherichia coli LF82]
 gi|242376676|emb|CAQ31388.1| artJ, subunit of arginine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325154|gb|ACT29756.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972876|gb|ACT38547.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|253977090|gb|ACT42760.1| arginine transporter subunit [Escherichia coli BL21(DE3)]
 gi|257752801|dbj|BAI24303.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O26:H11 str. 11368]
 gi|257758258|dbj|BAI29755.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O103:H2 str. 12009]
 gi|257763389|dbj|BAI34884.1| arginine 3rd transport system periplasmic binding protein ArtJ
           [Escherichia coli O111:H- str. 11128]
 gi|281177995|dbj|BAI54325.1| arginine ABC transporter substrate binding component [Escherichia
           coli SE15]
 gi|284920713|emb|CBG33776.1| arginine ABC transporter, substrate-binding protein [Escherichia
           coli 042]
 gi|291323977|gb|EFE63399.1| arginine transport system substrate-binding protein [Escherichia
           coli B088]
 gi|291428751|gb|EFF01776.1| arginine ABC transporter [Escherichia coli FVEC1412]
 gi|291469703|gb|EFF12187.1| arginine ABC transporter [Escherichia coli B354]
 gi|294492075|gb|ADE90831.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli IHE3034]
 gi|298279646|gb|EFI21154.1| arginine ABC transporter [Escherichia coli FVEC1302]
 gi|305853454|gb|EFM53893.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           NC101]
 gi|306908307|gb|EFN38806.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|307552703|gb|ADN45478.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           ABU 83972]
 gi|310336745|gb|EFQ01912.1| arginine-binding periplasmic protein 2 [Escherichia coli 1827-70]
 gi|312286475|gb|EFR14388.1| arginine-binding periplasmic protein 2 [Escherichia coli 2362-75]
 gi|312945377|gb|ADR26204.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315060145|gb|ADT74472.1| arginine transporter subunit [Escherichia coli W]
 gi|320177806|gb|EFW52792.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Shigella boydii ATCC 9905]
 gi|320183200|gb|EFW58058.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Shigella flexneri CDC 796-83]
 gi|320196645|gb|EFW71268.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli WV_060327]
 gi|320199095|gb|EFW73692.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli EC4100B]
 gi|323155766|gb|EFZ41935.1| arginine-binding periplasmic protein 2 [Escherichia coli EPECa14]
 gi|323159682|gb|EFZ45661.1| arginine-binding periplasmic protein 2 [Escherichia coli E128010]
 gi|323172173|gb|EFZ57811.1| arginine-binding periplasmic protein 2 [Escherichia coli LT-68]
 gi|323175518|gb|EFZ61113.1| arginine-binding periplasmic protein 2 [Escherichia coli 1180]
 gi|323185176|gb|EFZ70541.1| arginine-binding periplasmic protein 2 [Escherichia coli 1357]
 gi|323190682|gb|EFZ75951.1| arginine-binding periplasmic protein 2 [Escherichia coli RN587/1]
 gi|323379297|gb|ADX51565.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli KO11]
 gi|323947116|gb|EGB43127.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H120]
 gi|323953436|gb|EGB49302.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H252]
 gi|323958149|gb|EGB53858.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H263]
 gi|323962973|gb|EGB58545.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H489]
 gi|324116074|gb|EGC09998.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1167]
 gi|330910642|gb|EGH39152.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli AA86]
 gi|331055181|gb|EGI27190.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA206]
 gi|331060694|gb|EGI32658.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA143]
 gi|331065590|gb|EGI37483.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli TA271]
 gi|331080000|gb|EGI51179.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli H299]
 gi|332088881|gb|EGI93993.1| arginine-binding periplasmic protein 2 [Shigella boydii 5216-82]
 gi|332091102|gb|EGI96192.1| arginine-binding periplasmic protein 2 [Shigella dysenteriae
           155-74]
 gi|332097166|gb|EGJ02149.1| arginine-binding periplasmic protein 2 [Shigella boydii 3594-74]
          Length = 243

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|260102751|ref|ZP_05752988.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus helveticus DSM 20075]
 gi|260083444|gb|EEW67564.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus helveticus DSM 20075]
          Length = 272

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 86/233 (36%), Gaps = 10/233 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L       N ++   +K+   +  G+      F       G  +GF++D   AL+  + 
Sbjct: 19  ALTACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +   ++   A  R   L++  ID +      T  R     + F    +  G   ++ 
Sbjct: 79  GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVDFSKPYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I +V  L+G ++    GTT    +  +          + ++   +  +A +A++  
Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A T D   L  +    + P  + ++  + + +P   A+ +G  +  + ++   
Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYNNAPYGIAVNKGQKDMVDHINKAL 242


>gi|239817008|ref|YP_002945918.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239803585|gb|ACS20652.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 275

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 11/235 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79
           + +A  L DIKK+G L  G+         +        G++VD   A++  I   P    
Sbjct: 20  AAHADQLADIKKKGELVVGVLGTDEPATFIDPKTRQIVGYEVDLVNAIAKKIGVKP---V 76

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              +    R   LQ   +D+++        RE    + F   T+  GQ  I+ K  GI+ 
Sbjct: 77  LKQIAVAARIPELQQGHVDLVAAGLTHNKEREA--QIDFSLTTFVTGQKAIVKKDSGITE 134

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V QL+G  +    G T E  +    +        + F+  ++   A +  +   Y  D +
Sbjct: 135 VPQLAGKKVLTIRGGTQEPNI----RKAVPTAEVVTFDTSQQAFQALQQGKGVGYVDDEA 190

Query: 200 ALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           AL         + +++V+L   +S   LA  I +G++    +V  T   +  + E
Sbjct: 191 ALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGESALKAVVDDTLRELEKSGE 245


>gi|307627731|gb|ADN72035.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli
           UM146]
          Length = 243

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|22537577|ref|NP_688428.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 2603V/R]
 gi|22534460|gb|AAN00301.1|AE014257_8 amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae 2603V/R]
          Length = 268

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 94/275 (34%), Gaps = 16/275 (5%)

Query: 1   MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   + IL L+ +       S++  +   ++K+G L   ++     F     V     
Sbjct: 1   MSKKIILGILSLLSVVTLVACGSSDKQLQDKVEKKGKLVLAVSPDYAPFEFKALVNGKDK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D++  +A++  +     K++  P++      +LQ+ + D+      +T  R     
Sbjct: 61  VVGADIELAQAIADEL---HVKLEVSPMSFDNVLSSLQTGKADMAISGLSYTKERAKV-- 115

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      ++ K      +S+  L G  I VQ G+  E      FK      H 
Sbjct: 116 YDFSKPYYTTENAVLVRKSDLGKYTSIESLKGKKIAVQKGSIEEGVSKKSFK----NSHV 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +    + E  +  ++ + +A   + +        N                  A A+ + 
Sbjct: 172 VSLTAMGEAISELKSGKVEAVDLEKTVAEGYLAQNPDLVLAKFALKTGEGDAKAVALPKD 231

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
             +    V+     +   ++  +   +  +++ + 
Sbjct: 232 SGKMLKTVNKVIKRLEKEDKYKVYISDAAKLTGNQ 266


>gi|26987024|ref|NP_742449.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
 gi|24981643|gb|AAN65913.1|AE016219_6 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
          Length = 250

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 22/252 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    +++   + +              L+ GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTNP 107

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K     +  + L G  I  Q  T     L D    +       +++  E
Sbjct: 108 YYSNKLQFIAPKNVDFKTDKESLKGKVIGTQRATLAGTYLED----NYPDVEIKLYDTQE 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R D    D    Y    + D  +       ++    +  A+ +GDT+  + 
Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 224 LNKAL-AEIKAD 234


>gi|323143937|ref|ZP_08078595.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Succinatimonas hippei YIT 12066]
 gi|322416301|gb|EFY06977.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Succinatimonas hippei YIT 12066]
          Length = 250

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 76/248 (30%), Gaps = 19/248 (7%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           ++     + F +    A           L+ G       F  +  N   +G+D+D   A+
Sbjct: 11  TLCAAAAVTFCAVQAQAE---------VLRVGTEATYAPFEFMDDNVQPQGYDIDIINAV 61

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
             A+  D   +Q   +       AL + QID++      T  R   +             
Sbjct: 62  GKAMGYD---VQVQNMAFDGLIPALMTSQIDVVIAAMTITEERAKRVDFTEPYYKSGLSI 118

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             +   K    ++  L    +C Q GTT         KA  +  +   F    E     +
Sbjct: 119 LILEENKDKFKTIDDLKNERLCAQIGTTGA------LKAQEISGNVGAFNTEPEAFMELK 172

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           A  C     D                 + + + I+      A+ +G++E    ++     
Sbjct: 173 AKGCAGVVNDRPVNLYFLTK-SASKGVIEMSERITAEDYGIAVRKGNSELLKALNEGLKK 231

Query: 248 MVTAEELG 255
           +  + E+ 
Sbjct: 232 IKESGEMA 239


>gi|153011129|ref|YP_001372343.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563017|gb|ABS16514.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 257

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 74/246 (30%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQIIATAGIIQAALFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+++ +   P    ++          L SK+ D +      T  R+      F  
Sbjct: 61  VEIGEAVAAKLGVKPE---FVEGKWDGLIAGLDSKRYDAVINQVGITEERQK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKDDTIKDFADLKGKKSA-QSLTSNYGKLAKEAGA-----ELVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    K    +     ++ +  +       + +GD +   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSFLDFKKHQPKAPV-KVVAEKENADASGIIVRKGDDDLVT 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|302554581|ref|ZP_07306923.1| glutamate binding protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302472199|gb|EFL35292.1| glutamate binding protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 279

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 80/256 (31%), Gaps = 13/256 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M  +    +   +  L  T+ +   +              +  GI     G  +    G 
Sbjct: 1   MKLRKVTAASATVFALALTATACGGNNSTGGDSGSGGGKSITVGIKFDQPGLGQKTPQG- 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFDVD    ++  +  +  +I++    + +R   L+   +D ++     T  R+    
Sbjct: 60  YAGFDVDVATYVAKKLGYNADQIEWKESKSGDRETMLKRGDVDFIAATYSITPERQKL-- 117

Query: 116 LAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F            +      I S   L+ A +C   G+T+   + D       K    
Sbjct: 118 VDFAGPYLLAHQDVLVRADDSKIKSPKDLNNAKLCSVTGSTSAQNVKDKLA---PKAQLQ 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +          +    DA T D S L           +  +    ++       + +G 
Sbjct: 175 PYPTYSACLPGLQNGAVDALTTDDSILAGYASQAQFKGKFKLGGFKLTNENYGIGVKKG- 233

Query: 235 TEWYNIVSWTHYAMVT 250
           ++  + ++     MV 
Sbjct: 234 SDLKDKINKALEDMVA 249


>gi|254389483|ref|ZP_05004710.1| glutamate binding periplasmic protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294815860|ref|ZP_06774503.1| Putative glutamate ABC transporter substrate-binding protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326444202|ref|ZP_08218936.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|197703197|gb|EDY49009.1| glutamate binding periplasmic protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294328459|gb|EFG10102.1| Putative glutamate ABC transporter substrate-binding protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 301

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 81/225 (36%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++      + RG    G         E     G + GFD++  R +S+++  DP++I ++
Sbjct: 49  SSPTWRKAEARGHFVVGAKEDQPYLGEKDPATGLYSGFDIEIARMVSASLGLDPARISFV 108

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQ+ QID           R+  +G  F    Y  GQ  ++ K    I   
Sbjct: 109 TIASANRETALQNGQIDYYVGTYTINDNRKKLVG--FAGPYYMAGQDLLVRKDETDIKGP 166

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  +C   G+T    +   +         + ++           ++ DA T D + 
Sbjct: 167 EDLAGKRVCSATGSTPYQRIKQDYPQA----VLVSYDTYSICVDNLLTYQVDAVTTDDAI 222

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L         P E  ++    S+ P    + + D      +    
Sbjct: 223 LTGYAAKA--PDELKVVGKPFSQEPYGIGVPRSDNALRFAIDDAL 265


>gi|118476506|ref|YP_893657.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|196046984|ref|ZP_03114204.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB108]
 gi|225862823|ref|YP_002748201.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB102]
 gi|229074556|ref|ZP_04207585.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock4-18]
 gi|229095490|ref|ZP_04226481.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-29]
 gi|229114442|ref|ZP_04243860.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock1-3]
 gi|229183180|ref|ZP_04310410.1| Extracellular solute-binding protein family 3 [Bacillus cereus BGSC
           6E1]
 gi|300119245|ref|ZP_07056939.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus SJ1]
 gi|118415731|gb|ABK84150.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bacillus thuringiensis str. Al Hakam]
 gi|196022213|gb|EDX60900.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB108]
 gi|225790687|gb|ACO30904.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus 03BB102]
 gi|228600319|gb|EEK57909.1| Extracellular solute-binding protein family 3 [Bacillus cereus BGSC
           6E1]
 gi|228669121|gb|EEL24545.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock1-3]
 gi|228688036|gb|EEL41923.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-29]
 gi|228708676|gb|EEL60820.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock4-18]
 gi|298723353|gb|EFI64101.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus SJ1]
          Length = 265

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +        R D +T +        L   + ++  I+      S       
Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|331651878|ref|ZP_08352897.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli M718]
 gi|331050156|gb|EGI22214.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli M718]
          Length = 260

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 18  MKKLVLAALLASFTFGTSAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFANHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|332040838|gb|EGI77210.1| extracellular solute-binding protein family 3 [Hylemonella gracilis
           ATCC 19624]
          Length = 267

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 79/252 (31%), Gaps = 14/252 (5%)

Query: 1   MYKDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +  F+          +    + +     L  + +   +K  + T    +  V  +   
Sbjct: 1   MNRRPFLHAMLGAAATTLALLCTPAQAQDALSQVMQTKKIKIAVPTDYPPYGFVGLDLQP 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D++  + +++ +      ++ +P+ +  R   LQ+ Q+ ++          +    +
Sbjct: 61  QGLDIEVAKLIANKLG---VSVELVPVTSANRIPYLQTGQVQLVISTLGKNP--DRMKVI 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F        Q     K   I S + L G +I V  G   E  L     A         +
Sbjct: 116 DFTHAYSPFFQAVYAPKSLAIKSFADLGGKTIAVAKGAMEEQELVKSGPA---SMVFKRY 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E      AA+ A +        S   A  +    P        +I  SP    + +G   
Sbjct: 173 EDQAASTAAFVAGQTQVIAT--SVSNAGLMMQKNPQLGAEFKLLIKDSPNFIGVAKGQDA 230

Query: 237 WYNIVSWTHYAM 248
               V+    A 
Sbjct: 231 LRAKVNDILLAA 242


>gi|206562729|ref|YP_002233492.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198038769|emb|CAR54731.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 260

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   A R DA   D        L + R + +  +   +    +        + Q D
Sbjct: 166 DGVYADLIAGRLDAALQDEVQAAIGFLKSPRGANYTFVGPELVDEKVLGIGAGIGLRQED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 226 TDLKAKIDRAILDMV 240


>gi|326797153|ref|YP_004314973.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326547917|gb|ADZ93137.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 268

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 22/255 (8%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    K     +     L  T+ ++ AS +  I     LK     G + F     +G + 
Sbjct: 1   MKFGFKKALTGLALAGSLLATTQASAASAIDGILSSNELKVCFEAGYIPFEMKTKDGRFI 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLG 115
           GFD+D  + ++ ++      ++++P+N        ALQ+++ DI+      T  R  +L 
Sbjct: 61  GFDIDLGKHMARSM-----DVKFVPVNTAWDGIIPALQTEKCDIIMGGMTVTAQR--NLK 113

Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICV--QAGTTTELTLADYFKAHNMKY 171
           + F       GQ  ++  +    I+S   L+     +  Q GTT       Y     +  
Sbjct: 114 VMFSNPYITIGQTVVIKPELKGTITSYKDLNNPKYTITSQIGTTGAEAAKKYLPKAKLD- 172

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
              +FE   +        + DA+  D+         +     H  L +  +  PL  AI 
Sbjct: 173 ---LFETSADGVLQVANGKADAFVYDLPFNALYSSQHKDTVVH--LDESFTYEPLGWAIR 227

Query: 232 QGDTEWYNIVSWTHY 246
           Q D  + N ++    
Sbjct: 228 QDDPNFLNFLNNYLT 242


>gi|295095483|emb|CBK84573.1| L-cystine-binding protein/Diaminopimelate-binding protein
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 266

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            +  + L+           ++L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGMMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F + L+  +          P        +L SK+ID++      +  R+  
Sbjct: 61  GKLTGFEVEFAQELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I S + L G  + V  GT  E    ++ + +    
Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGSIKSAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               ++         R  R DA   D   L AL L     +   +  D  S+     A+ 
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVR 229

Query: 232 QGDTEWYNIVSWTH 245
           +G+ +    +    
Sbjct: 230 KGNEDLLKAIDGAI 243


>gi|239831830|ref|ZP_04680159.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824097|gb|EEQ95665.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 268

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G       F  +  +G   GFDVD  +AL   +  +    +++         ALQ+
Sbjct: 35  KLKIGTEGAYPPFNFINPDGTLSGFDVDIAKALCEEMKAE---CEFVTQEWDGAIPALQA 91

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 92  GKFDAFIASMSITDERKK--QVDFSNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQV 149

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     + D   
Sbjct: 150 STTHSNYSEKTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLAQWLKSPDGAC 205

Query: 213 EHVILPDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248
             ++           P    A  +G  E     +    A+
Sbjct: 206 CKMVGTFPPVIEIHGPGAGVAFKKGRPELVEKFNAAIKAI 245


>gi|300947050|ref|ZP_07161271.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 116-1]
 gi|300957064|ref|ZP_07169309.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 175-1]
 gi|300316149|gb|EFJ65933.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 175-1]
 gi|300453289|gb|EFK16909.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 116-1]
          Length = 260

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  GI+     F  + AN +  GFD
Sbjct: 18  MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|329935647|ref|ZP_08285454.1| bifunctional protein [Streptomyces griseoaurantiacus M045]
 gi|329304908|gb|EGG48779.1| bifunctional protein [Streptomyces griseoaurantiacus M045]
          Length = 665

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 72/224 (32%), Gaps = 1/224 (0%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            R  L  G      G +     G W GFD+D   AL+  +  D  ++ +  +    R   
Sbjct: 413 ARKRLTIGAKEDQPGLSLHDRKGVWSGFDIDIAYALARELGYDEKQVDFYGVTTANRASK 472

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICV 150
           L++ ++D++  +   T  RE   G+ F    Y  G   ++ +K     + +        V
Sbjct: 473 LRNGEVDLVVASYSMTPEREKRDGIRFVGPYYKAGTSLLVRRKSARYDLDEAVDVKRNHV 532

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
              T  + T AD  +           +  +E            Y      +       D 
Sbjct: 533 DVCTARDSTYADRLRKDGYTTGKWQPDTYKECVKRLLDRNSSVYAVASDDVLLAGYAKDD 592

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           P+   +LP      P   A+ + D      V      ++   E 
Sbjct: 593 PAHLKLLPSGSGTEPYGVAMRKDDPLLRGRVCSALRKILAGAEW 636


>gi|313893698|ref|ZP_07827265.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441712|gb|EFR60137.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Veillonella sp. oral taxon 158 str. F0412]
          Length = 268

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 3   KDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           K   V   +L +         +++           L  G N   V F         + GF
Sbjct: 7   KKLIVGSCMLVMAGSLVGGCGSSSQT-----TSNKLIVGTNATFVPFEFKDEKTQDYTGF 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  RA+   I  D   ++   +       AL ++ ID+ +     T  R  S  + F 
Sbjct: 62  DIELIRAIGKRINKD---VELKNIAFDALIPALNTRDIDVAASGMTITKAR--SKKVLFS 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y +    +      ++S+  L G  I  Q GTT                    F+  
Sbjct: 117 SPYYENALAVVYKDGTTVNSLDDLKGKKIAAQLGTTGADLAHKIEGTA-----VKEFDHS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWY 238
            E     +    DA   D+    A   +   P +H   +    +K  L  A+ + +    
Sbjct: 172 NEALLELQNGGVDATVIDLP--VAQYYSTKHPDQHIKFMAYPNTKEYLGLAMNKDNKALQ 229

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     M    E  
Sbjct: 230 EQINKAIADMKADGEFN 246


>gi|209549649|ref|YP_002281566.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209535405|gb|ACI55340.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 257

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 23/261 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F  + +  + LF  S   +               G ++    F  V A+G  +GFD+D
Sbjct: 6   RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL + +    ++  ++  +      AL +K+ D++  +   T  R     + F    
Sbjct: 57  ITKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y       + K   I+ V+ L G  I  Q  TT       +           ++   +E 
Sbjct: 112 YNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238
                + R DA   D+  L     ++      ++    + K         AI +GD    
Sbjct: 168 KLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226

Query: 239 NIVSWTHYAMVTAEELGITQK 259
             ++    A+  + E    Q 
Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247


>gi|300716010|ref|YP_003740813.1| Glutamine high-affinity transporter [Erwinia billingiae Eb661]
 gi|299061846|emb|CAX58962.1| Glutamine high-affinity transporter [Erwinia billingiae Eb661]
          Length = 248

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 87/249 (34%), Gaps = 21/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  L + F  S +              L    +T  V F   + N ++ GFD
Sbjct: 1   MKSIVKFSLAALTLAFAVSSTAAE---------KKLVVATDTAFVPFEFKQGN-EYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  +       P++      ALQ++ ID+       T  RE    + F  
Sbjct: 51  VDLWAAIAKQLNIEY---TLKPMDFSGIIPALQTRNIDLALAGITITPEREK--AIEFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I S++ L G  + V++GT +     ++ K+         F  +
Sbjct: 106 GYYKSGLLVMVKANNDKIKSIADLDGKVVAVKSGTGSVDYAKEHIKSK----ELHQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T  +  +   + + IS      A  +G  E   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFINTAGKG-QFKAVGESISAQQYGIAFPKGSDELRE 220

Query: 240 IVSWTHYAM 248
            V+     +
Sbjct: 221 KVNGALKVL 229


>gi|218548379|ref|YP_002382170.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           fergusonii ATCC 35469]
 gi|218355920|emb|CAQ88535.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 243

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ K+ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFKKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAVIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|218232648|ref|YP_002368957.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus B4264]
 gi|218160605|gb|ACK60597.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus B4264]
          Length = 259

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++IL   S  +N         +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLVSISFALILILSMFSACSNGESKETKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEGLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R DA   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|148545555|ref|YP_001265657.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148509613|gb|ABQ76473.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 250

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 88/252 (34%), Gaps = 22/252 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    +++   + +              L+ GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTEP 107

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K     +  + L G  I  Q  T     L D FK         +++  E
Sbjct: 108 YYSNKLQFIAPKNVDFKTDKESLKGKVIGTQRATLAGTYLEDNFK----GVDIKLYDTQE 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R D    D    Y    + D  +       ++    +  A+ +GDT+  + 
Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 224 LNKAL-AEIKAD 234


>gi|225028750|ref|ZP_03717942.1| hypothetical protein EUBHAL_03029 [Eubacterium hallii DSM 3353]
 gi|224953941|gb|EEG35150.1| hypothetical protein EUBHAL_03029 [Eubacterium hallii DSM 3353]
          Length = 266

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 89/264 (33%), Gaps = 27/264 (10%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILG------DIKKRGFLKCGINTGLVG 46
           M K   V++  ++ +   +         S  +S            K G L    N     
Sbjct: 3   MKKLAAVALAVVMSVSMLAGCGSSNDKKSAESSTSANGTATVKTAKDGVLTMATNATFPP 62

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +   + N D  G D D  +A++  +     K++   +       A+QS + D+       
Sbjct: 63  YESYEGN-DIVGIDADIAKAIADKLG---LKLEIQDMEFNSIITAVQSGKADLGLAGMTV 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    + F        Q  I+ +   I S+  L G  I VQ  TT ++   D F  
Sbjct: 119 TDERK--QSVDFTDSYATGIQSVIVKEGSSIKSIDDLKGKKIGVQLATTGDIYAKDDFGE 176

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            N       + +  +   A  + + DA   D       K   +      IL     +   
Sbjct: 177 EN----VEEYNKGADAVMALTSGKIDAVIIDN---QPAKSFVETTDGLQILDTDYVQEDY 229

Query: 227 APAIIQGDTEWYNIVSWTHYAMVT 250
           A AI +G+T+  N V+     +  
Sbjct: 230 AAAIQKGNTDLLNAVNGALKELKE 253


>gi|153009544|ref|YP_001370759.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561432|gb|ABS14930.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 268

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 76/253 (30%), Gaps = 18/253 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +    + +  I    +     A+   +  K   L  G       F     +G   GFDV
Sbjct: 5   KRIAVAASIVGIAATASGLVIGAATAEEPLK---LVIGTEGAYPPFNFTNPDGSLSGFDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RAL   +    ++  ++         ALQ+ + D    +   T  R+    + F   
Sbjct: 62  DIARALCEEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITDERKK--QVDFSNK 116

Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y    G  + K   I   +   L+G +I VQ  TT        F           +   
Sbjct: 117 YYNTPPGIAVPKDSDIKGVTKEDLAGKTIGVQVSTTHANYAEHAF----TDSTIKAYPTA 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           EE        R DA   D   L     T D     ++       +        A+ +G  
Sbjct: 173 EEYRLDMANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPSDDNIHGVGVGVALKKGRP 232

Query: 236 EWYNIVSWTHYAM 248
           E     +    A+
Sbjct: 233 ELVEKFNNAIKAI 245


>gi|107104175|ref|ZP_01368093.1| hypothetical protein PaerPA_01005248 [Pseudomonas aeruginosa PACS2]
 gi|296391926|ref|ZP_06881401.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAb1]
          Length = 259

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 14/243 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +L +  L   +    A  + D  KRG L+ G++   + F      G   GF+VD  +A+
Sbjct: 1   MVLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFEVDLLKAM 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           + ++      ++ +  +      AL + + D++      T  R  +L L F       GQ
Sbjct: 61  AKSMGVK---LELVSTSYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSEPFIVVGQ 115

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEID 183
             ++ K+    I S   L+     + +   TT E+                 F+   E  
Sbjct: 116 TLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKYHG----FDNEPEAV 171

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 + DA+  D                 V L    +  PLA  + +GD +  N ++ 
Sbjct: 172 MDVVNGKADAFIYDSPYNVVAVSKFGAGK-LVYLDQPFTYEPLAFGLKKGDYDSINFINN 230

Query: 244 THY 246
             +
Sbjct: 231 FLH 233


>gi|167584967|ref|ZP_02377355.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ubonensis Bu]
          Length = 260

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    L+ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAAA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITAQRAEQIA--FTT 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K   +   +  L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLVPSADSLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   A R DA   D        L + R + +  +   +    +        + + D
Sbjct: 166 DGVYADLLAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGVGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
            +    +      MV
Sbjct: 226 ADLKAKIDRAILDMV 240


>gi|330954118|gb|EGH54378.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae Cit 7]
          Length = 277

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 90/235 (38%), Gaps = 13/235 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +A  L D+  +  L CG+   +  F+       +  G DVD C+AL+  +  +   ++  
Sbjct: 21  HADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMGVE---LELK 77

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL+ + R   ++  ++D++  N  +T  R  +  + F    Y   +  ++         S
Sbjct: 78  PLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIAKETLVVRAANADQPKS 135

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
              G  I    G+T+E ++            P+ F+       A + ++      +    
Sbjct: 136 CFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMTA 189

Query: 202 YALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             L         E  I  + ++  P+   + QG+  +   V+ +  AM  A E+ 
Sbjct: 190 IKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLRAMEAAGEID 244


>gi|308187257|ref|YP_003931388.1| ABC transport system, periplasmic protein precursor [Pantoea vagans
           C9-1]
 gi|308057767|gb|ADO09939.1| Putative ABC transport system, periplasmic protein precursor
           [Pantoea vagans C9-1]
          Length = 266

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 85/247 (34%), Gaps = 15/247 (6%)

Query: 3   KDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +   + ++ + ++   +       ++L  IK+RG L  G+      F+     G   GF+
Sbjct: 8   RQMVMGVMAVALIAGVNVKTFAAENLLNKIKERGTLLVGLEGTYPPFSFQDEKGKLTGFE 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F   L+  +          P        +L +K+ID++      +  R+      F  
Sbjct: 68  VEFAEQLAQHMGVKA---SLKPTKWDGMLASLDAKRIDVVINQVTISDERKK--KYDFST 122

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                G   +  K     I+  + L+G  + V  GT  E  L +  K          ++ 
Sbjct: 123 PYTVSGIQALTMKANAGTITKPADLAGKKVGVGLGTNYEQWLRENVK----GVDIRTYDD 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                   R+ R +A   D   L AL L         +  D  S+     A+ +G+ +  
Sbjct: 179 DPTKYQDLRSGRLNAILVDR--LAALDLVKKTGDTMAVAGDAFSRQESGVAVRKGNDDLL 236

Query: 239 NIVSWTH 245
             +    
Sbjct: 237 KAIDQAI 243


>gi|213852331|ref|ZP_03381863.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 243

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 80/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                +  G++     F  + A+    GFD
Sbjct: 1   MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    + + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +    D   GD + +     TN +  P+   +       + L  A+   +    
Sbjct: 158 NAIIDLKNGHIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNNALAAI 227


>gi|329296932|ref|ZP_08254268.1| family 3 extracellular solute-binding protein [Plautia stali
           symbiont]
          Length = 261

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 83/222 (37%), Gaps = 10/222 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  L DI+KRG ++  +      F  V  N   +G+D+D  + L+  +     K+Q +P+
Sbjct: 23  ADQLQDIQKRGVIRVAVPQDFPPFGSVGTNLQPQGYDIDMAKYLAKQM---KLKLQLVPV 79

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            +  R   LQ+ ++D++  +      RE    + F         G    K + +   + L
Sbjct: 80  TSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFSRAYAPFFLGVFGPKGETLKDAAAL 137

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           SG SI V  G   ++ L+D             +E      +AY + +          + A
Sbjct: 138 SGKSIGVTRGAVEDMVLSDVAPK---DAQVKRYEDNTTTLSAYLSGQVQYVATGNLVVAA 194

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +        +  +   ++  SP    + + +      V+   
Sbjct: 195 IARQ--NAEKAPVPQFMLKDSPCVIGLKKNEPALKEKVNALI 234


>gi|317498349|ref|ZP_07956646.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894371|gb|EFV16556.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 268

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 16/255 (6%)

Query: 1   MYKDFFVSI-LCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K     + + L                  + L D++ +  L  G+++           
Sbjct: 1   MKKFLVGLLTVALAASMLVGCGKKEEKKKADNSLKDVQSKKELVLGLDSSFPPMGFTDKK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D  + ++  +     K++  P+N   +   L ++++D L     ++  R   
Sbjct: 61  DNIVGFDIDLAKEVTKRMG---IKLKLQPINWNSKEQELNTEKVDCLWNGVTYSKARAKE 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +          + Q  I+     I S+  ++  +       +T    AD  K        
Sbjct: 118 MLC--SESYMDNHQVLIVPANSKIKSLKDITKDTEVGIQSGSTAADAADSVKELKNS-KI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +     +I         DA   D   + A   T     ++ +L D ++K        + 
Sbjct: 175 KLLADNVQILNDLGHG-LDAAVMDE--VVAKYYTKKDAGKYKVLEDSVAKEKYVIGFRKD 231

Query: 234 DTEWYNIVSWTHYAM 248
           D    N V     AM
Sbjct: 232 DKALCNEVVKQLKAM 246


>gi|205357022|ref|ZP_02344159.2| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205324568|gb|EDZ12407.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 245

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 3   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 50  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G ++ VQ GTT +  + D           + ++  +
Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKNVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219

Query: 239 NIVSWTH 245
              +   
Sbjct: 220 QKFNTAL 226


>gi|209521051|ref|ZP_03269783.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209498507|gb|EDZ98630.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 270

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 11/231 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L F +   +A  L +I K G LK  +      F  V  +   +G+D+D    L+ A+   
Sbjct: 26  LAFHAGVAHADTLDNITKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTATLLAKAM--- 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++ +P+N+  R   LQ+ ++D++  +   T  RE    + F        QG      
Sbjct: 83  SVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKV--IDFSTAYAPYYQGVFGPAD 140

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +S  + L+G ++    G   E+ L               FE      AA+ + +    
Sbjct: 141 IKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNATIAAFLSGQVQLI 196

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   A+      P        +I  SP    + + +      V    
Sbjct: 197 AAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVDAAI 245


>gi|67923374|ref|ZP_00516855.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
 gi|67854799|gb|EAM50077.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
          Length = 261

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 10/232 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   +  L + +    +    A+ L +IK+RG L   +   +     +      +G ++
Sbjct: 7   RKLVLILTLGVFLNLGNNHLVIAATLEEIKERGKLLVAVKDNIRPLGFLDHKNQLQGLEI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R L+  I  DP  +   P++ +ER   +   ++D+          R     + F P 
Sbjct: 67  DLARQLAQDILGDPQALILQPVSNQERLQKVIDGEVDLAIARVTINSSRGRL--VNFSPY 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y DG G I      I +V  L  + I V  G++T   +             I  +  +E
Sbjct: 125 YYLDGTGIIT-NNGRIRAVDHLRESKIAVLEGSSTIAVIRAELPQAK----LIGVKSYQE 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                   + +A+  D S L           ++  LP  +S   L   + +G
Sbjct: 180 AMTLLETEKVEAFVADNSILTGWVQQYP---QYYRLPVRLSGEALGVVMPKG 228


>gi|307329669|ref|ZP_07608827.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
 gi|306884727|gb|EFN15755.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
          Length = 307

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 84/226 (37%), Gaps = 10/226 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++      + RG L  G+        E     G + GFD++  R +S+++   P  I++ 
Sbjct: 55  SSPTWRRAEHRGHLTVGVKEDQPYLGERDPATGRYSGFDIEIARMMSASLGFAPKTIRFQ 114

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQS QID          LR+  +G  F    +  GQ  ++      I   
Sbjct: 115 TIASANRETALQSGQIDYYVGTYTINPLRKRLVG--FAGPYFMAGQSLLVRTDENDIHGP 172

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G ++C  AG+T    +   +       H + ++          + + DA T D + 
Sbjct: 173 ADLAGRTVCSVAGSTPLQRIQTDYPKA----HAVAYDTYSVCVDNLLSFQVDAVTTDNTI 228

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           L         P E  ++    SK P    + + D      +     
Sbjct: 229 LLGYAAKA--PEELKVVGRPFSKEPYGIGVPKRDNALRFALDDAIQ 272


>gi|209516018|ref|ZP_03264878.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
 gi|209503478|gb|EEA03474.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
          Length = 258

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   + L ++   + +         K+   ++ G++     F     NGD  GFD
Sbjct: 1   MKK--FALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAPNGDIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  RAL + +     K  ++  +      AL++++ D +  +   T  R     + F  
Sbjct: 50  ADLTRALCAKM---NVKCVWVAQDLDGIIPALKARKFDAIISSLSVTDQR--REQIDFSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I       + +   L G  + V+ G+T E     +++        + ++  
Sbjct: 105 KLFDAPARMIAKTGSPLLPTPESLKGKHVGVEQGSTQEQYAKAWWEPKG--VVVVSYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234
           +++ A   + R DA   D     A  L   R        P++          A  + +GD
Sbjct: 163 DQVYADLTSGRLDAALQDEVQADASFLKTPRGKGFGWAGPEVNDPKTIGEGTAIGLRKGD 222

Query: 235 TEWYNIVSWTH 245
            +     +   
Sbjct: 223 GDLKAKFNQAL 233


>gi|311740950|ref|ZP_07714776.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311303986|gb|EFQ80063.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 337

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 87/223 (39%), Gaps = 15/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI KRG L  G++      +   A +GD +GF+VD  R ++  IF DP+K+ +  + + +
Sbjct: 86  DIVKRGRLIVGVDRSNNLMSYRDAASGDVRGFEVDIAREIARDIFGDPNKVDFRFIESSD 145

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL S  +D++ R    +  RE  +   F           ++    GI SV   +G +
Sbjct: 146 RVDALNSGAVDMIVRTMTISPERERDVA--FSIPYMSTQTRMLVLTNSGIKSVKDAAGKT 203

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C    +T   T+ ++          +V     +   A + ++ D    D + L  +   
Sbjct: 204 LCGVGASTALETIREHAPK----SDILVTRSWGDCLMALQLNQADGIVVDDALLSGMAAQ 259

Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245
           +       I+ + +       A+               V+ T 
Sbjct: 260 DS---YTSIVGEPLETENYGVAVRRPSKQHDTRPLLRQVNSTL 299


>gi|209521610|ref|ZP_03270307.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209497964|gb|EDZ98122.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 262

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 90/253 (35%), Gaps = 17/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   +S++    L  +  +  A      + +G L+ GI      F     +G  +GFD
Sbjct: 1   MFRKLQLSLIVTAALVGSLGTVGA------QAQGTLRFGIEAAYPPFESKSPSGQLQGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +        ++         AL++++ D+++   + T  R+ S+    +P
Sbjct: 55  VDVGNAVCTKLGVK---CVWVENAFDGLIPALEARKFDVINSAMNITDKRKQSIEFT-KP 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I               +  V  L G  + V  G++ E  L  ++         + ++  +
Sbjct: 111 IYVVPIVMVARRGSGLLPDVKSLQGKRVGVLQGSSQEDFLKAHWANAG--VTVVSYQDQD 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235
           ++ A     R DA   +        L      E+ I+   +S            + + D 
Sbjct: 169 QVYADLVGGRLDAAVQEAQTAQDGFLGKPAGHEYAIVGKPLSDPATLGEGTGWGVRKADK 228

Query: 236 EWYNIVSWTHYAM 248
                V+    A+
Sbjct: 229 ALVAKVNAALDAL 241


>gi|307131836|ref|YP_003883852.1| histidine/lysine/arginine/ornithine ABC transporter
           periplasmic-binding protein [Dickeya dadantii 3937]
 gi|306529365|gb|ADM99295.1| periplasmic-binding component of an ABC superfamily
           histidine/lysine/arginine/ornithine transporter [Dickeya
           dadantii 3937]
          Length = 259

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 22/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L+           S L ++ K   +K G +     F    A+G   GFD
Sbjct: 1   MKKMLKLLPLALVF-------AAGSALAEVPKN--IKIGTDPTYAPFESKDASGQLVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKELCKRI---EANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V   +T E     Y++   +    + ++  
Sbjct: 107 KLYAANARLIAKKGSPILPTLEALKGKRVGVLQASTQESYANQYWQPKGVD--VVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R DA   D  A     L      E+      +    L        + + +
Sbjct: 165 DLIYADLTAGRIDAAFQDEVAGSEGFLKQAAGKEYAFAGPAVKDDKLFGVGTGMGLRKNE 224

Query: 235 TEWYNIVSWT 244
           TE    +   
Sbjct: 225 TELKAALDKA 234


>gi|300902393|ref|ZP_07120376.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 84-1]
 gi|301305368|ref|ZP_07211463.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 124-1]
 gi|300405540|gb|EFJ89078.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 84-1]
 gi|300839386|gb|EFK67146.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 124-1]
 gi|315257896|gb|EFU37864.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 85-1]
          Length = 260

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  GI+     F  + AN +  GFD
Sbjct: 18  MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 65  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 233 LLEKLNNALAAI 244


>gi|257790426|ref|YP_003181032.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
 gi|257474323|gb|ACV54643.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
          Length = 276

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 14/243 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
           ++L   S   +A         G   L  G + G   +  V  +G + GFD++  +A+   
Sbjct: 20  VMLAGCSGGGDAQSADSAATDGSFTLAVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEK 79

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   ++  P++   +   + S  I+ +                 F     ++ Q  +
Sbjct: 80  MGWE---LKLEPIDWDAKDALIGSGTINCIWNGFTM---ENRENDYTFSEPYMYNEQVVV 133

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAYR 187
           + K      +  L+G ++  Q  +     L D        +                   
Sbjct: 134 VKKDSDAKKLEDLAGKTVLTQVDSAALHVLEDEKGQKALADTFKELQTIGDYNNAFMQLE 193

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           +   DA   D+S   A      +P  +V L  +      A    +GDTE    V+    A
Sbjct: 194 SGMVDAVACDLSI--ASYQMAAKPDTYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALKA 250

Query: 248 MVT 250
           +  
Sbjct: 251 LDE 253


>gi|161507107|ref|YP_001577061.1| glutamine-binding protein precursor [Lactobacillus helveticus DPC
           4571]
 gi|160348096|gb|ABX26770.1| Glutamine-binding protein precursor [Lactobacillus helveticus DPC
           4571]
          Length = 272

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 86/233 (36%), Gaps = 10/233 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L       N ++   +K+   +  G+      F       G  +GF++D   AL+  + 
Sbjct: 19  ALTACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +   ++   A  R   L++  ID +      T  R     + F    +  G   ++ 
Sbjct: 79  GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVDFSKPYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I +V  L+G ++    GTT    +  +          + ++   +  +A +A++  
Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A T D   L  +    + P  + ++  + + +P   A+ +G  +  + ++   
Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYNNAPYGIAVNKGQKDMVDHINKAL 242


>gi|282901104|ref|ZP_06309036.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194003|gb|EFA68968.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis
           raciborskii CS-505]
          Length = 267

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 91/250 (36%), Gaps = 17/250 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              +    L+ L     ++ A+ + +I++RG++   +       A     G+ +G ++D 
Sbjct: 14  TILLFSCVLLPLPGIINTSLAATMQEIQERGYITIAVKDNTPPLAFRDKQGNLQGLEIDL 73

Query: 64  CRALSSAIFDD------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            + L+  +  D        ++++ P+   ER  A+ + ++D+       T  R   + L+
Sbjct: 74  AKRLARDLLGDSPSSRVKLQVKFQPVTNVERLPAVFNHKVDLAIARVTATPSRSRIVSLS 133

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                       I+ K   I  +S L+   ICV   ++T   +         +   +   
Sbjct: 134 IPYYYDGTA---IVTKNPAIQKLSDLNKRRICVLNYSSTIPHVKYAIP----QGELVGVN 186

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDT 235
              E        + DA   D +          + S++ IL D +S  PL+  + +     
Sbjct: 187 SYLEAKKLLDNGQVDACAADSTVFQGWI--EPQYSQYKILLDRLSVEPLSIVMPKGLQYD 244

Query: 236 EWYNIVSWTH 245
           +    V+   
Sbjct: 245 DLRTRVNDLM 254


>gi|323529254|ref|YP_004231406.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323386256|gb|ADX58346.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 277

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 85/227 (37%), Gaps = 11/227 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  + +RG L+ G       F     +G   G+DVD  + L+  +      + 
Sbjct: 34  SAGTDSTLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPDGYDVDLAKELAKQMGVKLEVVN 93

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
                +  R   LQ+ ++D++  N    L R   +   F        +  +++K  GI S
Sbjct: 94  ---TTSANRIPNLQTSKVDVVFCNFTRNLERAKEIA--FTNPYVVASEALLVNKSSGIKS 148

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           ++ ++  +I    G+T      D  ++ NM+     F+  +    A +  + DA   D +
Sbjct: 149 INDMANRTIATVKGSTN----GDEVRSLNMQVKIQEFDSSQAAILAVKQGQADAMIEDNN 204

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            L         P   V    ++     A  +  GD  W N ++   +
Sbjct: 205 FLAYQASL--DPDLTVTNEALVPLEYNAFGVKAGDQVWLNYLNLFLF 249


>gi|30019027|ref|NP_830658.1| cystine-binding protein [Bacillus cereus ATCC 14579]
 gi|229042722|ref|ZP_04190462.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH676]
 gi|229108460|ref|ZP_04238077.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock1-15]
 gi|229126283|ref|ZP_04255301.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-Cer4]
 gi|229143576|ref|ZP_04272001.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST24]
 gi|229149191|ref|ZP_04277432.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           m1550]
 gi|296501587|ref|YP_003663287.1| cystine-binding protein [Bacillus thuringiensis BMB171]
 gi|29894569|gb|AAP07859.1| Cystine-binding protein [Bacillus cereus ATCC 14579]
 gi|228634390|gb|EEK90978.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           m1550]
 gi|228639932|gb|EEK96337.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST24]
 gi|228657275|gb|EEL13095.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-Cer4]
 gi|228675087|gb|EEL30314.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock1-15]
 gi|228726662|gb|EEL77879.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH676]
 gi|296322639|gb|ADH05567.1| cystine-binding protein [Bacillus thuringiensis BMB171]
          Length = 265

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 76/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +  + 
Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNGAEI 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +      +      + R D +T +        L   + ++  I+      S       
Sbjct: 172 EGVE--GFSQAAELLASGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|300870611|ref|YP_003785482.1| polar amino acid uptake ABC transporter amino acid-binding protein
           [Brachyspira pilosicoli 95/1000]
 gi|283462653|gb|ADB22527.1| oligopeptide-binding protein 5 [Brachyspira pilosicoli]
 gi|300688310|gb|ADK30981.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Brachyspira pilosicoli 95/1000]
          Length = 271

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 89/229 (38%), Gaps = 8/229 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S+  + L  +K+ G L  G++  L        NG+  GFD+D  R +++ +  +      
Sbjct: 28  SSADNSLQKVKENGKLVLGLDDTLAPMGFRDDNGEIVGFDIDLAREVANRLGVELEA--- 84

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
            P++     L+L+   +D++         R     + F     ++      +  +  I+S
Sbjct: 85  KPIDWSSAILSLKKGDVDVIWNGFAVNESR--KQQVNFTKPYLYNRLMIAKYSDRDDINS 142

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L G  + VQ+G++   TL +   +  +K     ++          A R DA   D  
Sbjct: 143 KEELKGKIVGVQSGSSNYETLVNDPVSKEIK-EIRQYDSYVNAFLDLEAKRIDAVIVDE- 200

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +    ++ +     ++    I+   L+  + + DTE  N +      M
Sbjct: 201 IVARYYISKENADFTLLEDKPITSQYLSVGLRKTDTELLNAIDKALDDM 249


>gi|146310956|ref|YP_001176030.1| glutamine ABC transporter periplasmic protein [Enterobacter sp.
           638]
 gi|145317832|gb|ABP59979.1| L-glutamine-binding protein [Enterobacter sp. 638]
          Length = 247

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 82/245 (33%), Gaps = 21/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 52  LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITEERKK--AIEFSDGY 106

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 107 YKSGLLLMVKADNNDVKSVKDLDGKIVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 162

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T         + + +       A  +G  E  N V
Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQQYGIAFPKGSDELRNKV 221

Query: 242 SWTHY 246
           +    
Sbjct: 222 NGALK 226


>gi|283786384|ref|YP_003366249.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter
           rodentium ICC168]
 gi|282949838|emb|CBG89461.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter
           rodentium ICC168]
          Length = 260

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 94/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L+I    S S  A++         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSVL--ALSLLIGLSASVSGYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    D +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDALKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E          A   A          ++++K   + +V
Sbjct: 226 GELKA-------AFDKALADLRQDGTYDKMAKKYFDFNV 257


>gi|229820930|ref|YP_002882456.1| extracellular solute-binding protein family 3 [Beutenbergia
           cavernae DSM 12333]
 gi|229566843|gb|ACQ80694.1| extracellular solute-binding protein family 3 [Beutenbergia
           cavernae DSM 12333]
          Length = 294

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 7/205 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G +  GI     G      N ++ GFDVD    ++  +     +I+++   + +R   
Sbjct: 50  AEGTINIGIKFDQPGLGFRDGN-EYTGFDVDVATYVACQLGYAEDQIEWVESPSAQRENM 108

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150
           LQ+ Q+D++      T  R+  +   F    +  GQ  ++      I+    L G ++C 
Sbjct: 109 LQTGQVDMIFATYSITDERKEVVA--FAGPYFVAGQDLLVRADETDIAGPEDLEGRNLCS 166

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G+T+   + D +       + +      +      A + DA T D   L  L      
Sbjct: 167 VTGSTSAQRIKDEYAE---GTNLVEQPGYADCVTVLLAGQVDAVTTDDIILAGLAAQPAN 223

Query: 211 PSEHVILPDIISKSPLAPAIIQGDT 235
             +  ++    S+      I Q   
Sbjct: 224 QGQLTVVGAPFSEENYGVGIPQDSE 248


>gi|209695039|ref|YP_002262968.1| extracellular solute-binding protein [Aliivibrio salmonicida
           LFI1238]
 gi|208008991|emb|CAQ79219.1| extracellular solute-binding protein [Aliivibrio salmonicida
           LFI1238]
          Length = 253

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 19/263 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K       CL +L   S S  A  L DI++ G ++ G       F+      ++ G+D
Sbjct: 1   MQKKLL----CLSVLLAASCSAQADRLDDIQESGVIRVGTTGDYKPFSSFDGK-NYTGYD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +      ++ +  + K     L + + DI        + R++        
Sbjct: 56  IDVAKHIADQLGVK---LELVKTSWKNLIPDLNADKYDIAMGGITRKMQRQLHAEQTQGY 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +T+         K    +++ +++   + V         +  +  AH        +E   
Sbjct: 113 MTFGKCFLVAKGKADAFNTIDKVNMKEVRVGINIGGTNEI--FADAHLQNATFTRYENNL 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + D    +       + T+ R  E        +KS     + +G+ E  N 
Sbjct: 171 DVPQAVATGKVDVMVTETPEALFYQATDKR-LEAARCETPFTKSQFGYLVPKGEQELLNT 229

Query: 241 VSWTHYAMVTAEELGITQKNINQ 263
           V++            +  KNI++
Sbjct: 230 VNFIMD--------EMKLKNIDE 244


>gi|167031323|ref|YP_001666554.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166857811|gb|ABY96218.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 250

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 89/252 (35%), Gaps = 22/252 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    +++   + +              L+ GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTEP 107

Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K     +  + L G SI  Q  T     L D FK         +++  E
Sbjct: 108 YYSNKLQFIAPKNVDFKTDAASLKGKSIGTQRATLAGTYLEDNFK----GVDVKLYDTQE 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R D    D    Y    + D  +       ++    +  A+ +GDT+  + 
Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 224 LNKAL-AEIKAD 234


>gi|319897440|ref|YP_004135637.1| bacterial extracellular solute-binding protein [Haemophilus
           influenzae F3031]
 gi|317432946|emb|CBY81313.1| Bacterial extracellular solute-binding protein [Haemophilus
           influenzae F3031]
          Length = 257

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 80/259 (30%), Gaps = 19/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHSKDGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +     K+++        +  L +K+ D+++  T      E      +  
Sbjct: 61  VEIIEKVAEKLG---LKVEFKETAWDGMYAGLNAKRFDVIANQT--NPSPERLKKYDYSA 115

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     +       I + S L G      A +       D           +  + +
Sbjct: 116 PYNYSAGVIVTKENNDSIKTFSDLKGKKSAQSATSNWSKDARD------NGAIIVTMDSL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  R D+   D  A+             + + +   K P     ++G+     
Sbjct: 170 AQNLEAVKQERVDSTVNDKLAVLDYFKKQPNAGLKIAV-ESDKKIPTGFVSLKGEEALIA 228

Query: 240 IVSWTHYAMVTAEELGITQ 258
            V+         EEL    
Sbjct: 229 KVNKAL------EELRQDG 241


>gi|62180926|ref|YP_217343.1| lysine/arginine/ornithine ABC transporter ATP-binding protein
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224583157|ref|YP_002636955.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|62128559|gb|AAX66262.1| ABC superfamily (bind_prot), lysine/arginine/ornithine transport
           protein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224467684|gb|ACN45514.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|322715404|gb|EFZ06975.1| lysine/arginine/ornithine ABC transporter ATP-binding protein
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 260

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A G++ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257


>gi|46199113|ref|YP_004780.1| amino acid ABC transporter, binding protein [Thermus thermophilus
           HB27]
 gi|46196737|gb|AAS81153.1| amino acid ABC transporter, binding protein [Thermus thermophilus
           HB27]
          Length = 254

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 75/223 (33%), Gaps = 11/223 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +IK+ G ++ G       F          GF+VD   A++  +   P   +++  +   
Sbjct: 24  EEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKP---RWIAQSFDT 80

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
             + L   + D +  +   T  R     + F    Y  G   +  K     +   L G  
Sbjct: 81  LLIQLNQGRFDFVIASHGITEERAR--AVDFTNPHYCTGGVIVSRKGGP-RTAKDLQGKV 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ GTT                    ++R  +      A R D +  D        + 
Sbjct: 138 VGVQVGTTYMEAAQKIPGIK----EVRTYQRDPDALQDLLAGRIDTWITDRFV-AKEAIK 192

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +    + + +++ +  +A A+ +G+    + ++     ++ 
Sbjct: 193 ERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQ 235


>gi|306833385|ref|ZP_07466512.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
 gi|304424155|gb|EFM27294.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
          Length = 280

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 17/258 (6%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51
           M  K   V +L L+     +  +++               K G +  G +   V      
Sbjct: 1   MKFKKVLVGVLALVSTLTLAACSSSSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFD+D   A+          +++  +N   +   L +  ID++      T  R 
Sbjct: 61  EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDER- 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168
            S  + F      + Q  +  K  GI+S + +    +  Q+G++         +  K   
Sbjct: 117 -SEKVLFTDPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSHPEVLKDIV 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  +E   +     +  R D    D                + I+         A 
Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235

Query: 229 AIIQGDTEWYNIVSWTHY 246
              + D      ++    
Sbjct: 236 GARKADKTLVKKINQAFK 253


>gi|153011067|ref|YP_001372281.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562955|gb|ABS16452.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 266

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 11/231 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             + DIK  G +K G+      F  +  + +  G+D D  + L+  +  D   +    + 
Sbjct: 28  QTVDDIKSAGKIKIGMLVDFPPFGIMNTSNEPDGYDADVAKLLAKELGVDAQIVP---VT 84

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   LQS Q+D+L  +   T  R     + F         G    K   ++   +LS
Sbjct: 85  GPNRIPYLQSGQVDVLVASLGITEERAK--SVDFSQPYAGISIGVFGPKDTVVTKPEELS 142

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G SI V   +T +  +           +   F+       A  + + +           +
Sbjct: 143 GKSIGVARASTQDTAVTKVAPQ---DANIRRFDDDASAVQALLSGQVELIGLSNVVAAEI 199

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +       +  I    +S+     A+ +G TE    V+       +  EL 
Sbjct: 200 EKAAPGRYDQKI---QLSQQVQGIAVRKGATEMLEFVNKFIEKAKSDGELN 247


>gi|74311404|ref|YP_309823.1| arginine 3rd transport system periplasmic binding protein [Shigella
           sonnei Ss046]
 gi|73854881|gb|AAZ87588.1| arginine 3rd transport system periplasmic binding protein [Shigella
           sonnei Ss046]
 gi|323165793|gb|EFZ51579.1| arginine-binding periplasmic protein 2 [Shigella sonnei 53G]
          Length = 243

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDSVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|15830197|ref|NP_308970.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|168750048|ref|ZP_02775070.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4113]
 gi|168756658|ref|ZP_02781665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4401]
 gi|168763286|ref|ZP_02788293.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767374|ref|ZP_02792381.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4486]
 gi|168776405|ref|ZP_02801412.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779416|ref|ZP_02804423.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787085|ref|ZP_02812092.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC869]
 gi|168799854|ref|ZP_02824861.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC508]
 gi|195936908|ref|ZP_03082290.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. EC4024]
 gi|208809343|ref|ZP_03251680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4206]
 gi|208815419|ref|ZP_03256598.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822095|ref|ZP_03262414.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4042]
 gi|209400027|ref|YP_002269532.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4115]
 gi|217324548|ref|ZP_03440632.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. TW14588]
 gi|254792059|ref|YP_003076896.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|261225513|ref|ZP_05939794.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258518|ref|ZP_05951051.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. FRIK966]
 gi|13360402|dbj|BAB34366.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|187768247|gb|EDU32091.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4196]
 gi|188015730|gb|EDU53852.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002772|gb|EDU71758.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4076]
 gi|189356275|gb|EDU74694.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363585|gb|EDU82004.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4486]
 gi|189366502|gb|EDU84918.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373030|gb|EDU91446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC869]
 gi|189377718|gb|EDU96134.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC508]
 gi|208729144|gb|EDZ78745.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4206]
 gi|208732067|gb|EDZ80755.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4045]
 gi|208737580|gb|EDZ85263.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4042]
 gi|209161427|gb|ACI38860.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC4115]
 gi|217320769|gb|EEC29193.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. TW14588]
 gi|254591459|gb|ACT70820.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|320192656|gb|EFW67297.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. EC1212]
 gi|320637729|gb|EFX07521.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. G5101]
 gi|320642853|gb|EFX12054.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H- str. 493-89]
 gi|320648310|gb|EFX16965.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H- str. H 2687]
 gi|320654147|gb|EFX22215.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320659771|gb|EFX27327.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664241|gb|EFX31392.1| Arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326338247|gb|EGD62076.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. 1125]
 gi|326346224|gb|EGD69962.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli O157:H7 str. 1044]
          Length = 243

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN    GFD
Sbjct: 1   MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESMDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T   + S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITP--DRSKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNSRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|190892105|ref|YP_001978647.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190697384|gb|ACE91469.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|327189351|gb|EGE56519.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CNPAF512]
          Length = 257

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 23/261 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F  + +  + LF  S   +               G ++    F  V A+G  +GFD+D
Sbjct: 6   RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL + +    ++  ++  +      AL +K+ D++  +   T  R     + F    
Sbjct: 57  ITKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y       + K   I+ V+ L G  I  Q  TT       +           ++   +E 
Sbjct: 112 YNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238
                + R DA   D+  L     ++      ++    + K         AI +GD    
Sbjct: 168 KLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226

Query: 239 NIVSWTHYAMVTAEELGITQK 259
             ++    A+  + E    Q 
Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247


>gi|317401661|gb|EFV82286.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Achromobacter xylosoxidans C54]
          Length = 302

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 85/234 (36%), Gaps = 8/234 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS----AIFDDPSKIQY 80
           S L  I+  G +  G     V FA +  N    G+ V+ C+ ++     A+      ++Y
Sbjct: 25  SRLDKIRDTGVITIGHPETSVPFAYLDGNQKPIGYTVEICQEIAQHIKTALKLPKLDVRY 84

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--S 138
            P  +  R   L +  ID+   NT   L R     ++F P T+      +  K  G+  +
Sbjct: 85  NPTTSATRIPLLANGTIDLECGNTTNNLERHKL--VSFAPTTFVAQVVLVARKDGGVDPN 142

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +++   G +I  QAG  T   ++      N+       +   E      + R      D 
Sbjct: 143 NLASFRGKTIAAQAGGQTFKLISRLNAEGNLGISMAPTKDTAETLLMVESGRAAGSANDD 202

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              Y +  ++  P   VI    +  +P      + D  +  +V      M+ + 
Sbjct: 203 GIAYGVVASSKNPDVFVIGTKGLELAPYGIMQPKDDPAFKKVVDDAVLDMMKSG 256


>gi|16765682|ref|NP_461297.1| lysine/arginine/ornithine transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|161612911|ref|YP_001586876.1| hypothetical protein SPAB_00617 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167993042|ref|ZP_02574137.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237379|ref|ZP_02662437.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168242479|ref|ZP_02667411.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261623|ref|ZP_02683596.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465935|ref|ZP_02699805.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817909|ref|ZP_02829909.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194446318|ref|YP_002041618.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194449415|ref|YP_002046410.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194735350|ref|YP_002115425.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197248703|ref|YP_002147315.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197264781|ref|ZP_03164855.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|200389109|ref|ZP_03215721.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929153|ref|ZP_03220296.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238912365|ref|ZP_04656202.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|20141196|sp|P02911|ARGT_SALTY RecName: Full=Lysine-arginine-ornithine-binding periplasmic
           protein; Short=LAO-binding protein; Flags: Precursor
 gi|16420898|gb|AAL21256.1| lysine/arginine/ornithine transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|161362275|gb|ABX66043.1| hypothetical protein SPAB_00617 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404981|gb|ACF65203.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194407719|gb|ACF67938.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710852|gb|ACF90073.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631170|gb|EDX49730.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197212406|gb|ACH49803.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197243036|gb|EDY25656.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289681|gb|EDY29044.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199606207|gb|EDZ04752.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321697|gb|EDZ06896.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205328786|gb|EDZ15550.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338490|gb|EDZ25254.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344716|gb|EDZ31480.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349521|gb|EDZ36152.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|267994455|gb|ACY89340.1| lysine/arginine/ornithine transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301158913|emb|CBW18426.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312913346|dbj|BAJ37320.1| lysine/arginine/ornithine ABC transporter substrate binding protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320086790|emb|CBY96562.1| Histidine-binding periplasmic protein HBP; Flags: Precursor
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321222944|gb|EFX48015.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322617100|gb|EFY14006.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617594|gb|EFY14493.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624776|gb|EFY21605.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630326|gb|EFY27096.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634506|gb|EFY31239.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639217|gb|EFY35909.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640080|gb|EFY36747.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645700|gb|EFY42224.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652064|gb|EFY48427.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656236|gb|EFY52533.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659388|gb|EFY55635.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665848|gb|EFY62031.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669913|gb|EFY66054.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322673898|gb|EFY69995.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322678657|gb|EFY74713.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683548|gb|EFY79562.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687623|gb|EFY83593.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323130686|gb|ADX18116.1| lysine/arginine/ornithine transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323193542|gb|EFZ78747.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198449|gb|EFZ83551.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204561|gb|EFZ89564.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208501|gb|EFZ93440.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323213639|gb|EFZ98428.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218326|gb|EGA03036.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222919|gb|EGA07268.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323224506|gb|EGA08788.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232321|gb|EGA16424.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235645|gb|EGA19729.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241195|gb|EGA25231.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244937|gb|EGA28939.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323250056|gb|EGA33950.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323253840|gb|EGA37665.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323254977|gb|EGA38768.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323259836|gb|EGA43468.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264143|gb|EGA47650.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270841|gb|EGA54279.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 260

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A G++ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257


>gi|294637081|ref|ZP_06715395.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Edwardsiella tarda ATCC 23685]
 gi|291089709|gb|EFE22270.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Edwardsiella tarda ATCC 23685]
          Length = 248

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 20/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    + +  + L F   +  A           L    +T  V F   K +  + GFD+D
Sbjct: 2   KSLLKASVAALALTFALGAQAAE--------KPLIVATDTAFVPFEFKKGD-KYVGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  +       P++      ALQ+  +D+       T  R+    + F    
Sbjct: 53  LWEAIAKQLHLNY---TLKPMDFSGIIPALQTHNVDLALAGISITEERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I  +  L G  + V++GT       DY KAH        F  ++ 
Sbjct: 108 YNSGLMVMVKSDNAEIKGIKDLDGKVVAVKSGTAGV----DYAKAHVKSKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R DA   D   +     T     +   + D +       A  +G       V
Sbjct: 164 AYLELATGRADAVLHDTPNILYFIQTAGNG-QFKAVGDSLEAQAYGIAFPKGSDALREQV 222

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 223 NGALKTLKE 231


>gi|227547864|ref|ZP_03977913.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Corynebacterium lipophiloflavum DSM 44291]
 gi|227080049|gb|EEI18012.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Corynebacterium lipophiloflavum DSM 44291]
          Length = 332

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 10/226 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +T A  + D+ +RG +  G++      +      GD +GF++D  R +S  IF DP ++ 
Sbjct: 75  ATPAERIPDVVERGRIVVGVDQSQYLLSYRDVTAGDLRGFEIDLAREVSRDIFGDPDRVD 134

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +  + +++R  +LQ+ ++DI+ R    T  R     + F           ++ + +GISS
Sbjct: 135 FRFVGSQQRAQSLQNGEVDIVIRTMSVTPTR--VASVDFSTPYLTSYVRLLVPRDRGISS 192

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G ++CV  G+     L    +    +   +      +   A +    DA   D +
Sbjct: 193 EDDLPGTTVCVVDGS----NLVQLAREIAPQSTILRTRTWADCLMATQQFHADAILADGA 248

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L  +   +       ILP    +   A    +GD      V+ T 
Sbjct: 249 ILAGMVSQDP---YTTILPRRYGRQQYAVGTHKGDAGMTMQVNSTM 291


>gi|37528308|ref|NP_931653.1| hypothetical protein plu4487 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787746|emb|CAE16859.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 257

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 15/252 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K    ++L  +I F  ++S +A S L +IK  G  K         F     +G   GFD+
Sbjct: 2   KMLLTALLAGVIQFGIAYSAHAESGLDNIKSAGVFKIATEGTYPPFTYHDVSGALTGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R ++  +        +           L +K+ D +      T  R+      F   
Sbjct: 62  DIGREIARRLNVKAE---FTEGKWDGLIAGLDAKRYDAVLNQVAITPERKK--KYDFSGP 116

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   I  K    I + S L G +    + T+    LA +F A       +  E   
Sbjct: 117 YIISKAVLITRKNNDSIKTFSDLKGKTSS-HSLTSNYAQLAKHFGA-----EIVPTEGFN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        R DA   D  +    +         V+  +      +   I +G+ E    
Sbjct: 171 QAIDLVATGRADATINDNLSYLDFRKHKPNAPVKVVASEPNGDL-VGVLIRKGEPELQAA 229

Query: 241 VSWTHYAMVTAE 252
           +     A + A+
Sbjct: 230 IDKAL-ADIKAD 240


>gi|328887000|emb|CCA60239.1| amino acid ABC transporter, amino acid-binding protein
           [Streptomyces venezuelae ATCC 10712]
          Length = 291

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 13/256 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           + L    F+  A+ +        +  GI     G      +G + GFDVD    ++  + 
Sbjct: 29  LSLTSAGFANGAAAVPADHGGDKITVGIKYDQPGIGLKTPDGTYTGFDVDVATYIAKELG 88

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            DPS I +    + +R   LQ   +D ++ +      R     + F        Q  ++ 
Sbjct: 89  HDPSDIVWKEAKSADRETLLQRGDVDFIAASYSINDERAK--KVDFAGPYLLAHQDVLIR 146

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                I   S L+   +C   G+T+   + +             +    E          
Sbjct: 147 ADDDSIKKPSDLNNKKLCSVTGSTSAQNVKEKIA---PDAQLQEYGGYSECLTGLENGVI 203

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY----- 246
           DA T D S L      +    +  +    +S       + +G ++  + ++         
Sbjct: 204 DALTTDDSILAGYASQDQFKGKFKLGGFKLSNENYGIGVQKG-SDLKDKINTALEKMVAD 262

Query: 247 -AMVTAEELGITQKNI 261
            +   A E      N 
Sbjct: 263 GSWDKAVEKNFGPANY 278


>gi|295706523|ref|YP_003599598.1| arginine ABC transporter arginine-binding protein ArtP [Bacillus
           megaterium DSM 319]
 gi|294804182|gb|ADF41248.1| arginine ABC transporter, arginine-binding protein ArtP [Bacillus
           megaterium DSM 319]
          Length = 269

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 75/220 (34%), Gaps = 17/220 (7%)

Query: 1   MY-KDFF--VSILCLIILFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVK- 51
           M  K +    +I  L      +              D K +  L  G +     F  +  
Sbjct: 1   MKLKKWLSVTAIGLLAAGVLAACGAGEGTSNGGASNDDKDKKVLVMGTSADYPPFEYIDT 60

Query: 52  --ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              + +  GFDVD  + +   +  D   +Q   +       ALQS ++D++      T  
Sbjct: 61  AKGDSEAIGFDVDLAKTIGKKLGYD---VQVKDMEFGGLIPALQSNKVDLVLAGMTPTEK 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F  + Y      +  K   I +  +L G ++ VQ  +       +  K  + 
Sbjct: 118 RKK--NVDFSDVYYEAKNMIVSKKDAPIKNAEELKGKTVGVQTSSIQADEAKEIAKEVD- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             +    +R+ E+    +++R DA   + +        + 
Sbjct: 175 GVNVTTRDRIPELIQEMKSNRIDAAIIEDTVAKGYVNKDK 214


>gi|229593008|ref|YP_002875127.1| putative ABC transporter substrate-binding exported protein
           [Pseudomonas fluorescens SBW25]
 gi|229364874|emb|CAY52937.1| putative ABC transport system, substrate-binding exported protein
           [Pseudomonas fluorescens SBW25]
          Length = 253

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 84/252 (33%), Gaps = 18/252 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +S   L +L   + + +A           L+         F  V +     GF
Sbjct: 1   MKKPLSTISTASLWLLCTVTGAAHAET---------LRIASEGAYPPFNYVDSTNTLHGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   AL   +        ++  + +    AL +K+ D +  + + T  R+    +AF 
Sbjct: 52  DIDIANALCERM---KVTCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKK--KIAFT 106

Query: 120 PITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y       +    GI        G ++  Q+ +T  +   + + A        ++  
Sbjct: 107 NRYYRTPLSVAVANDSGIRDAQTDFKGLTVGAQSYSTQAIYAEERYGAAG--ATVKLYPS 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E  +   A R D    D   L A   +  +    V+     + +  A A+ Q D    
Sbjct: 165 QDEAASDLAAGRLDGVIADKYPLLAWVESAGKDCCKVLGDIYGTNTDAAIAVRQEDVALR 224

Query: 239 NIVSWTHYAMVT 250
             ++     +V 
Sbjct: 225 ERLNRALDEIVA 236


>gi|15890697|ref|NP_356369.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158966|gb|AAK89154.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 278

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 90/251 (35%), Gaps = 13/251 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
           +++   ++    +    A  L  I     L+C     +V FA       +  GFDVD C+
Sbjct: 6   LTLTAAVLGVAAASPAMADQLDTITANKVLRCATFADVVPFAAPDPKTREMAGFDVDLCK 65

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +          P++ + R   ++  ++DI   N  +T  R   +   F    Y  
Sbjct: 66  AIAKELGVKAE---IKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQ--FSDPYYLA 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            +  I+  +      S   G  +    G+T+E+++         K  P+ F+       A
Sbjct: 121 KEMLIVPVEDAGKKKSDYEGQRVASTKGSTSEMSI------KLNKSEPLTFQDTASAYLA 174

Query: 186 YRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            +  +      + ++    +K +  +     ++ + +   P+   + + +      ++  
Sbjct: 175 VQQGKARGMVANTMTTTKFVKESKTKGKPMRMIEEPMLYQPIGIGMAKDNPALTAKINEI 234

Query: 245 HYAMVTAEELG 255
              +    E+ 
Sbjct: 235 LRKLDADGEIN 245


>gi|330968064|gb|EGH68324.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 254

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   +     +     +F+              LK GI      F    A+G   G
Sbjct: 1   MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD +  +AL + +  +    + +  +      AL +++ D L  +   T  R     + F
Sbjct: 49  FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITEER--KQVVDF 103

Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               Y +   F+  K   I       +   L+G S+  Q  T     L D  +       
Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSPIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             +++  E       + R DA   D    Y    +    +       ++    +  A+ +
Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDKIGIAVRK 219

Query: 233 GDTEWYNIVSWTHYAMVT 250
           GD      ++     ++ 
Sbjct: 220 GDDPLRERLNVALKEVIA 237


>gi|330874238|gb|EGH08387.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 254

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   +     +     +F+              LK GI      F    A+G   G
Sbjct: 1   MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD +  +AL + +  +    + +  +      AL +++ D L  +   T  R     + F
Sbjct: 49  FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITEER--KQVVDF 103

Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               Y +   F+  K   I       +   L+G S+  Q  T     L D  +       
Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             +++  E       + R DA   D    Y    +    +       ++    +  A+ +
Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDKIGIAVRK 219

Query: 233 GDTEWYNIVSWTHYAMVT 250
           GD      ++     ++ 
Sbjct: 220 GDDPLRERLNVALKEVIA 237


>gi|325970769|ref|YP_004246960.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy]
 gi|324026007|gb|ADY12766.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp.
           Buddy]
          Length = 271

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 11/240 (4%)

Query: 13  IILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
             LF       A    S L  +  +G    G++            G+  GFDVD  + ++
Sbjct: 16  ASLFAAGTKEQAIGGDSSLDKVMSKGQFVMGLDDNFPPMGFRNEKGEIVGFDVDLAKEVT 75

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++  P++   +   L +  ID +      T  R+    + F      + Q 
Sbjct: 76  KRMG---VTLKLQPIDWNAKEQELNTGNIDCIWNGFTITEERK--QAMTFTAPYIHNAQV 130

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++      ++++ LSG S+  QAG++    +             I F+           
Sbjct: 131 VVVRDDSPYTTLASLSGKSVGYQAGSSASSAIDASPDFKKSIKTFIEFKENLTGLMDLEI 190

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              DA   D     A            IL + ++         +GD +  + V     AM
Sbjct: 191 GGIDALVVD--VTVANDNIKRSGKAFRILTEELAPEDYGIGFRKGDQKLADAVWSQLLAM 248


>gi|188534296|ref|YP_001908093.1| Arginine-binding periplasmic protein 1 [Erwinia tasmaniensis
           Et1/99]
 gi|188029338|emb|CAO97215.1| Arginine-binding periplasmic protein 1 [Erwinia tasmaniensis
           Et1/99]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L   +                ++         F  + A+   +GFD
Sbjct: 1   MNKIVIAALLAGFSLSAGASQ-------------TIRFAAEASYPPFEFIDADNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I  D     +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCHEIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++++  L G  + VQ GTT +  +             + ++  +
Sbjct: 103 PYYDNSALFIAQKG-KLANMDALKGKRVGVQNGTTHQKYI----GEKLPDVKVVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N    P    +       + L  A+ QG++E  
Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKNNQELAPLGEKVTDKTYFGNGLGIAVRQGNSELQ 217

Query: 239 NIVSWTH 245
           + ++   
Sbjct: 218 SKLNAAL 224


>gi|322516945|ref|ZP_08069838.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
 gi|322124490|gb|EFX95981.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
          Length = 283

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 84/256 (32%), Gaps = 18/256 (7%)

Query: 1   MYKDFFVSIL-CLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAEV 50
           M K     +L CL+I    + S  +S               K   +K G +   V     
Sbjct: 1   MKKIVKTVLLSCLVIFPLFALSACSSRSHFATQKDQWQIYTKEKKIKIGFDATFVPMGYE 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G + GFD+D   A+      +   +++  ++   +   L++  ID++      T  R
Sbjct: 61  EKDGSYVGFDIDLATAVFKLYGIN---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAH 167
           +      F      + Q  +  K  GI SV+ +SG ++  QAG +            +  
Sbjct: 118 K--QSADFTEPYMVNEQVLVTKKSSGIDSVAGMSGKTLGAQAGASGYDAFNASPKILRDI 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + +    +      + R D    D          +    ++ ++P        A
Sbjct: 176 VANQKAVQYSTFTQALIDLDSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235

Query: 228 PAIIQGDTEWYNIVSW 243
               + D      ++ 
Sbjct: 236 VGARKADKTLIKKINQ 251


>gi|260655474|ref|ZP_05860962.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Jonquetella anthropi E3_33 E1]
 gi|260629922|gb|EEX48116.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Jonquetella anthropi E3_33 E1]
          Length = 250

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 16/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++ L      S +  AS++      G +  G  +    F  +  +G  +G+D
Sbjct: 1   MKK-LGSALVLLAAAVLGSSAWGASVMDK----GEIVVGTESTFPPFEFLSPDGKLQGYD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +      + +  ++      +L + +ID+++     +  R   +G  F  
Sbjct: 56  VDLAEAIGQKLGKK---VVWRDMSFDALIPSLLTGKIDLIAAGMSASPERAKRVG--FSD 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y      ++     I S++ L G ++ VQ GT  E  L               +++ +
Sbjct: 111 VYYRATSVVVIAAGSPIKSLADLQGKTMAVQLGTIQETFLR-----GQPGVSVRAYQKYD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239
           +        R D    D +         D   + V      +     A A+ +GD  + +
Sbjct: 166 DCLREVVLGRADGAMMDETVAGEFLKQADFAGKIVSAFTQAAGESGQALAMPKGDETFIS 225

Query: 240 IVSWTH 245
            V+   
Sbjct: 226 AVNKAL 231


>gi|239983304|ref|ZP_04705828.1| glutamate binding periplasmic protein [Streptomyces albus J1074]
 gi|291455131|ref|ZP_06594521.1| glutamate binding periplasmic protein [Streptomyces albus J1074]
 gi|291358080|gb|EFE84982.1| glutamate binding periplasmic protein [Streptomyces albus J1074]
          Length = 312

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 13/243 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            +      K RG L  G         E    G  + GFD++  + + + +    +++++ 
Sbjct: 60  ESPTWRKAKARGALVVGAKEDQPYLGEKDPAGGGYTGFDIEIAKMVGAHLGFAENRVRFT 119

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            + +  R  ALQ+ QID           R+  +G  F    Y  GQG ++    + I   
Sbjct: 120 TIASANRETALQNGQIDYYVGTYTINDNRKRLVG--FAGPYYVAGQGLLVRSDEEDIKGP 177

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G  +C  AG+T    + + +         + ++           ++ DA T D + 
Sbjct: 178 EDLDGKRVCSAAGSTPYQRMQEEYPKA----VLVSYDTYSICVDNLLTYQVDAVTTDDAI 233

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L         P E  ++    S+ P    +++ D      +     A+   E  G  +  
Sbjct: 234 LLGYAAKV--PEELKVVGKPFSEEPYGIGVLRSDNALRLAIDD---ALEEGERKGYWKAA 288

Query: 261 INQ 263
            + 
Sbjct: 289 YDA 291


>gi|307130768|ref|YP_003882784.1| arginine ABC transporter periplasmic-binding protein [Dickeya
           dadantii 3937]
 gi|306528297|gb|ADM98227.1| periplasmic-binding component of an ABC superfamily arginine
           transporter [Dickeya dadantii 3937]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 81/248 (32%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  ++  L  L  ++ +              ++         F  V A+    GFD
Sbjct: 1   MKKLFVAAL--LGGLSLSAGAAE-----------TIRFATEASYPPFESVDASNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   I    +   +           L+ ++ D +    D T  R     ++F  
Sbjct: 48  IDLANALCKQI---QATCTFSNQAFDSLIPGLKFRRFDAVIAGMDITPER--QQQVSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ ++ L G  + VQ GTT +  L D  K        + ++  +
Sbjct: 103 PYYENSALFIAQKG-KLADIAALKGKRVGVQNGTTHQKFLLDKHK----DITVVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N+        +         L  A+ Q + E  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNENLASVGDKVTDKDYFGIGLGIAVRQNNDELV 217

Query: 239 NIVSWTHY 246
              +    
Sbjct: 218 KKFNDALN 225


>gi|28872469|ref|NP_795088.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28855724|gb|AAO58783.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 254

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   +     +     +F+              LK GI      F    A+G   G
Sbjct: 1   MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD +  +AL + +  +    + +  +      AL +++ D L  +   T  R     + F
Sbjct: 49  FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITDER--KQVVDF 103

Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               Y +   F+  K   I       +   L+G S+  Q  T     L D  +       
Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             +++  E       + R DA   D    Y    +    +       ++    +  A+ +
Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDKIGIAVRK 219

Query: 233 GDTEWYNIVSWTHYAMVT 250
           GD      ++     ++ 
Sbjct: 220 GDDPLRERLNVALKEVIA 237


>gi|121609960|ref|YP_997767.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121554600|gb|ABM58749.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 246

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 20/244 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            +F+S+L            +A  +        ++   +     F     NG   GFD++ 
Sbjct: 3   RYFISLLAAFSFGLLPALASAQTVS------VIRVATDATFPPFEFF-KNGKRTGFDIEL 55

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              L+  +      +++  ++ K     L S++ D+ S     T  R     + F    Y
Sbjct: 56  IELLAKNMGKK---VEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRV--VDFTDPYY 110

Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             G   +       I   S L+G  + VQ GT +   L  Y+     +   I  E+ +E+
Sbjct: 111 PGGLVVLTKASNTAIRQPSDLAGKKVSVQVGTKSANYLKAYYP----QTERIEVEKNQEM 166

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  R DA      A      T        +L   +S      A+ +   +    ++
Sbjct: 167 FNLVEIGRADAAVTGKPAAIEYAKTRPG---MKVLDKQVSVELYGYAVRKDLPQLTEEMN 223

Query: 243 WTHY 246
               
Sbjct: 224 AALK 227


>gi|295693349|ref|YP_003601959.1| amino acid ABC transporter, amino acid-binding protein
           [Lactobacillus crispatus ST1]
 gi|295031455|emb|CBL50934.1| Amino acid ABC transporter, amino acid-binding protein
           [Lactobacillus crispatus ST1]
          Length = 289

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 107/299 (35%), Gaps = 42/299 (14%)

Query: 1   MYKDFF----VSILCLIILFFT---------SFSTNASILGD------IKKRGFLKCGIN 41
           M K  F      +  ++++            + + +     +      IK+RG+L+  + 
Sbjct: 2   MAKKIFNWIMAVLFAVVVVIAGYFGITRPGINGTASGDRWNNENNVSSIKRRGYLRVAVF 61

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
             L  +  V + G   G+DV   R ++  +   P   +++ +NA  R   L S + DI+ 
Sbjct: 62  GDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVL 118

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+     ++         G I  K   I+S  QL G S+ V  GTT E    
Sbjct: 119 ANFTLTPERKSV--ASWTKPYMKVSVGVISPKSAPITSPKQLKGKSVIVTKGTTAENYFT 176

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                     + + F+   +   A +  R  A   D S LYA       P   V +  I 
Sbjct: 177 -----KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIG 229

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
               ++ A+ +G+      +              IT+ N         N +++ + G +
Sbjct: 230 PNQYISGAVKKGNKSLQKWMDR-----------EITKLNSESFFTYDYNKELKPYFGKE 277


>gi|329295876|ref|ZP_08253212.1| glutamine ABC transporter periplasmic protein [Plautia stali
           symbiont]
          Length = 248

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 84/245 (34%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      +  + L F+  ST A           L    +T  V F   + +  + GFD+D
Sbjct: 2   KSLIKVSVAALALAFSLSSTAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWDAIAKQLKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITEERKK--AIEFSDGY 107

Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I  +  L+G  + V++GT +     DY KAH        F  ++ 
Sbjct: 108 YKSGLLVMVRNNENDIKGIDDLNGKVVAVKSGTGSV----DYAKAHIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T  +      + D I       A  +G  +    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAIGDSIEAQQYGIAFPKGSDDLREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|300311590|ref|YP_003775682.1| amino acid ABC transporter/signal transduction system periplasmic
           protein/domain-containing protein [Herbaspirillum
           seropedicae SmR1]
 gi|300074375|gb|ADJ63774.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 267

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 87/254 (34%), Gaps = 12/254 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K     +L L  +        A  L DI+K G ++ G+      F  V  +   +G D+
Sbjct: 6   RKTMLAVVLGLAAM--QGGLARADALADIQKNGVVRIGVPQDFAPFGSVNTDLQLQGLDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R ++  +      +Q +P+ +  R   LQ+ + D++         RE    + F   
Sbjct: 64  DVARLIAQKMGVK---LQLVPVASANRIAYLQTHKADLVISTLGRNAEREKV--IDFSQP 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                          +S  + L+  ++ V  GT  +L L D             +E    
Sbjct: 119 YAPYNNSVFGVASVKVSGPADLADKTVGVARGTFQDLQLTDTAPK---SATIKRYEDNNA 175

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           + +AY + +           YAL           +L  II +S     + +G+      V
Sbjct: 176 MISAYVSGQVQLVGTGDFVAYALAEKAPN--NKPVLKYIIQESACNVGLNKGEPALLAKV 233

Query: 242 SWTHYAMVTAEELG 255
           +    A   + EL 
Sbjct: 234 NEALTAAKKSGELN 247


>gi|51893761|ref|YP_076452.1| amino acid ABC transporter substrate-binding protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51857450|dbj|BAD41608.1| amino acid ABC transporter substrate-binding protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 291

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 76/229 (33%), Gaps = 19/229 (8%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKI 78
              S L  IK+ G +    +     F     +       G++++   A+++ +      +
Sbjct: 49  APVSRLEQIKQAGKIVVATSADYPPFEYHAIIDGKDKIVGWEMELAEAIANELGVK---L 105

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKG 136
           +          L L + + D++      T  R     + F    +   Q  ++ K  +  
Sbjct: 106 EITEGIFDTLLLDLAAGKADMVISAMTITPER--LESVDFSEPYWMTAQSVLIPKAAEGT 163

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S   L G +I VQ GTT E+   +   A         +E  E       A R  A  G
Sbjct: 164 IQSAEDLIGKTIGVQLGTTGEIAAKEVEGA-----EVRSYELFEAAVLDLVAGRVQAVVG 218

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D + +     T    +    L    +K   A A  Q D E    V+   
Sbjct: 219 DYAVVKNYAATRPELTVAFEL----TKEENAVAFRQDDDELREAVNAIL 263


>gi|323967295|gb|EGB62718.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli M863]
 gi|325496802|gb|EGC94661.1| arginine-binding periplasmic protein 2 precursor [Escherichia
           fergusonii ECD227]
 gi|327253647|gb|EGE65276.1| arginine-binding periplasmic protein 2 [Escherichia coli STEC_7v]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLSSCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|170681491|ref|YP_001742968.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ
           [Escherichia coli SMS-3-5]
 gi|170519209|gb|ACB17387.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli SMS-3-5]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLSSCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKKNTY-KTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|161521438|ref|YP_001584865.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189352394|ref|YP_001948021.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160345488|gb|ABX18573.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189336416|dbj|BAG45485.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 260

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   A R DA   D        L + R + +  +   +    +        + + D
Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 226 TDLKAKIDRAILDMV 240


>gi|16330909|ref|NP_441637.1| glutamine-binding protein [Synechocystis sp. PCC 6803]
 gi|1653403|dbj|BAA18317.1| glutamine-binding protein [Synechocystis sp. PCC 6803]
          Length = 296

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 28/261 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLVG 46
           +   V+   L ++   + S  A                  L  I++RG L+ G+   L  
Sbjct: 26  RSLIVASCLLFLIPGLTVSATAQTMVLETNGIAMTSREVSLEAIRQRGKLRVGVKDNLRP 85

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                  G+  G ++   R L+ A+  D + ++ +P+  ++R   L +  +D++      
Sbjct: 86  LGFRDGQGELTGLEIALARRLALALLGDETAVELVPVQNQDRLPLLLNGDVDLIIAQMGQ 145

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R+    + F P  Y DG G I  K   + ++ +    +I V   + T   +   F  
Sbjct: 146 NPARDRL--VDFSPPYYMDGVGLIS-KNSSLKNIDRNQAHTIAVLNNSGTIPVIKQAFPQ 202

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  +  +  ++        +  A+ GD S L     +     ++  LP  ++ +PL
Sbjct: 203 A----TLVGVDSYDQAYQILEQGQAMAFAGDNSVLSGWAQSQS---DYYHLPLQLTVNPL 255

Query: 227 APAIIQ--GDTEWYNIVSWTH 245
           A A+ +          V+ T 
Sbjct: 256 AIAMAKGLQHQALQREVNQTL 276


>gi|312796580|ref|YP_004029502.1| cystine-binding protein [Burkholderia rhizoxinica HKI 454]
 gi|312168355|emb|CBW75358.1| Cystine-binding protein [Burkholderia rhizoxinica HKI 454]
          Length = 280

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 15/227 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             +K+ G L+ G+      F    A+G+  G+DVD  +A++  +   P    ++      
Sbjct: 47  DQVKEHGTLRIGLEGTYPPFNFRDAHGELVGYDVDVAKAIALRLGVKPE---FITTEWSG 103

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSG 145
               LQ+ + D++      T +R       F     +     I  K       S+  L G
Sbjct: 104 IIAGLQAGKFDVIVNQVGITPVR--QQTFDFSQPYTYSVAQLIQRKDDSRQFKSLDNLKG 161

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + V  G+                     +    E      A R DA   D   L  L 
Sbjct: 162 KKLGVSLGSNYND-----MAKSVPGIEVKTYPGAPEYLRDLAAGRIDAALNDRLMLAYLI 216

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            TN  P        +  +  +     +G+ ++   +     A + A+
Sbjct: 217 KTNALP--LRPSSTLGQQEKVGIPFKKGNPKFAKAIDDAI-AQLKAD 260


>gi|146307938|ref|YP_001188403.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas mendocina ymp]
 gi|145576139|gb|ABP85671.1| L-arginine-binding protein / L-ornithine-binding protein
           [Pseudomonas mendocina ymp]
          Length = 257

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 82/265 (30%), Gaps = 24/265 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   + +              L+ GI      FA    +G   GFD
Sbjct: 1   MKKIALLGALALSMLSPLAMA-----------EKPLRIGIEAAYPPFAFKTPDGQISGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +  +    +++         AL+ ++ D +  +   T   +    + F  
Sbjct: 50  YDIGNALCEEMKVE---CKWIEQEFDGLIPALKVRKFDAVLSSMSITE--DRLKSVDFTG 104

Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y       M     +      L G  + VQ  +  +    D F    +    + +   
Sbjct: 105 KYYHTPAKLAMKAGTELKDPLVDLKGKKVGVQRASIYDRYATDVFAPAGI--EVVRYSSQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI    ++ R DA   D   +    L  D            +++         A+ +GD
Sbjct: 163 NEIFLDLQSGRLDATLADSVNIDDGFLKTDAGKGFAFTGPDYTETKYFGEGAGIAVRKGD 222

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
            E  + +S    A+    +    Q 
Sbjct: 223 KELADKISAAILAIRANGKYKEVQD 247


>gi|152974180|ref|YP_001373697.1| extracellular solute-binding protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152022932|gb|ABS20702.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus
           NVH 391-98]
          Length = 264

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 86/253 (33%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F     + +       + S  +S       +   +  ++     F   + +G   
Sbjct: 1   MKKKLFTVAATITLSLSFILGACSKESSTTST-DGKKEFRYAMSGLYKPFNYKENDGKLM 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +   P+ +       +     LQ+K+ D++  +   T  R     ++
Sbjct: 60  GFDVEIGEALAKKMGMKPAPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114

Query: 118 FR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F  P      Q F+  +   ISSV  L G  + V   +T +  +               +
Sbjct: 115 FTKPYYRSGAQIFVSKQNDSISSVDDLKGKKVGVVKASTFKALVE------KQTDKITEY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +A A+ + D +
Sbjct: 169 DSDLTALMDLEPGRVDAVITD--QMVGLRMIKEGNSSIKEAGKPLNLDEMAIAVRKDDKK 226

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 227 MVEKVNKALDEII 239


>gi|325576596|ref|ZP_08147314.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|301155429|emb|CBW14895.1| cystine transporter subunit [Haemophilus parainfluenzae T3T1]
 gi|325161159|gb|EGC73274.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 257

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 19/260 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K FF + L    L  ++F+    I   +++   L  G       F     +G   GFD
Sbjct: 1   MKKSFFSTALLAAGLALSTFANAGEIADRVEQTKTLLVGTEGTYAPFTFHDKDGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      +++        +  L +K+ D+++  T      E      +  
Sbjct: 61  VEIIEKVAQKLGWK---VEFKETAWDGMYAGLNAKRFDVIANQT--NPSPERLKKYDYSA 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     +       I S   L G      A +       D           +  + +
Sbjct: 116 PYNYSAGVIVTKADNDSIKSFPDLKGKKSAQSATSNWSKDARD------NGAIIVTVDSL 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  R DA   D  A+             + + +   K P   A ++G+     
Sbjct: 170 AQNLEAVKQGRVDATVNDKLAVLDYFKKQPNAGLKIAV-ESDKKIPTGFAFLKGEEPLIA 228

Query: 240 IVSWTHYAMVTAEELGITQK 259
            V+         EEL     
Sbjct: 229 KVNQAL------EELRKDGT 242


>gi|295092613|emb|CBK78720.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
          Length = 302

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 83/287 (28%), Gaps = 47/287 (16%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28
           M K  F  +    ++F  T+ STNA                                   
Sbjct: 1   MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60

Query: 29  ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                 + K  G     G +        V  +G++ GFD++    ++  +          
Sbjct: 61  EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG---LTFVPQ 117

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+    + + L+S  ID +      T   +      +      + Q  ++ +  GI S +
Sbjct: 118 PIAWDAKNMELESGNIDCIWNGFTMTGREDE---YTWSEPYMENSQVVVVLEDSGIESTA 174

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  + VQA ++ E  L +  +                          DA   D   +
Sbjct: 175 DLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD--VI 232

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            A            IL D ++    A    +G+    + V      M
Sbjct: 233 VAGYQLQQWDGGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEM 279


>gi|166030981|ref|ZP_02233810.1| hypothetical protein DORFOR_00662 [Dorea formicigenerans ATCC
           27755]
 gi|166029248|gb|EDR48005.1| hypothetical protein DORFOR_00662 [Dorea formicigenerans ATCC
           27755]
          Length = 275

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 9/220 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              + K+      G +        V  +G++ GFD++  + +      + +     P+  
Sbjct: 39  TFEEKKEGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAKEVCDRNGWEFNP---EPIAW 95

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             +   L+S +ID +          +      +      + Q F++    GI+S   L+G
Sbjct: 96  DSKDALLKSGEIDCIWNGFTMNGREDE---YTWSEPYLDNQQVFVVRADSGINSEKDLAG 152

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ VQ  ++ E  L D     +  +   +            +   DA   D   + A  
Sbjct: 153 KTVDVQTDSSAEAALKDN-TELSSTFSTEIIPDYNTGFMNLESGAVDAVAMD--IVVAKY 209

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               R +E  IL   I+         +G+    + V  T 
Sbjct: 210 QIESRSAEFKILDYEIASEQYGVGFAKGNDAVKDQVQKTL 249


>gi|29142427|ref|NP_805769.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|29138057|gb|AAO69618.1| arginine-binding periplasmic protein 1 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANSKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNTAL 224


>gi|261341396|ref|ZP_05969254.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288316710|gb|EFC55648.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 247

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 81/249 (32%), Gaps = 21/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 52  LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 106

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V+ GT +     DY KA+        F  ++ 
Sbjct: 107 YKSGLLVMVKADNNDVKSVKDLDGKVVAVKGGTGSV----DYAKANIKTKDLRQFPNIDN 162

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T         + D +       A  +G  +    V
Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGDSLEAQQYGIAFPKGSDDLRTKV 221

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 222 NGALKTLKE 230


>gi|317488404|ref|ZP_07946957.1| bacterial extracellular solute-binding protein, family 3
           [Eggerthella sp. 1_3_56FAA]
 gi|316912448|gb|EFV34004.1| bacterial extracellular solute-binding protein, family 3
           [Eggerthella sp. 1_3_56FAA]
          Length = 256

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 74/215 (34%), Gaps = 8/215 (3%)

Query: 35  FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L+ G    + GF       G+ +G +VD  R L+  I   P  ++   +N   R   L 
Sbjct: 18  VLRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKGSPDALRVTGVNVTTRGAMLD 77

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           +  +D        T  R+      F    Y D  G ++ K  GI  +  L G ++ V   
Sbjct: 78  NGTLDATLATFTITEARKK--SYNFSRPYYTDHIGVLVKKSSGIVDLKDLDGKTVGVALS 135

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            TT   L        +      +    EI  A    R DA++ D S L            
Sbjct: 136 ATTRDKLTAAGDEIGIHMSFAEYSTYPEIKIALVTGRVDAFSVDRSILNGYV-----DDS 190

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            ++L    +      A  + +TE  + V     AM
Sbjct: 191 TMLLDAQFAPQEYGVATKKSNTELADQVDAAIGAM 225


>gi|295677022|ref|YP_003605546.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295436865|gb|ADG16035.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 259

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 69/246 (28%), Gaps = 14/246 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      +  ++    +   +A  L  IK  G  + G       F      G   GFDV+
Sbjct: 2   KPIRSLAMAALLQAVLAHPASADDLAQIKASGVFRIGTEGTYAPFTYHDDAGKLTGFDVE 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +   P   Q++          L   + D +      T  R+  L   +    
Sbjct: 62  LASAIAQRLGVKP---QFIEGKWDGLIAGLDVNRYDAVINEVAVTDERK--LKYDYSDPY 116

Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                  I+      I S   L G         T    +     AH      I  +  +E
Sbjct: 117 ITSHAVLIVASDNTTIRSFDDLKGRKSA----NTLTSNVGRIAAAHG--AQVIPAQGFDE 170

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYN 239
                 A R DA   D  +    K         V+  D    S    A  I +G+ +   
Sbjct: 171 SIDLLVAGRVDATVNDSLSFLDYKKRVPDARIKVVAVDTSPDSSDKSAVLIRKGNPKLRL 230

Query: 240 IVSWTH 245
            +    
Sbjct: 231 AIDDAL 236


>gi|310779668|ref|YP_003968001.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309748991|gb|ADO83653.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 260

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 83/256 (32%), Gaps = 26/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I  L ++  +SFS              L  G+      F    A G+  G  
Sbjct: 1   MKK-IITIISMLFLISLSSFSQEKP----------LVVGMELAYPPFEMTDAKGNPTGIS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   +  D   I    +       AL++K++DI+  +   T  R+    + F  
Sbjct: 50  VDMAKALGEYLGRD---IVIENMGYGGLIPALKTKKVDIILSSMTITDQRKK--SINFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    ++ K+  +   S L+  G +I V+ GTT  +     F   N     +VFE+
Sbjct: 105 PYAKSYLTLLVSKRSPVKRPSDLNTRGVNIAVKKGTTGHVVATKLFPKAN----IMVFEK 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SPLAPAIIQGDTE 236
                      + DA+  D       K     P+    + D   K           G+  
Sbjct: 161 ESVCVLEVTQGKADAFIYDPLT--VFKNWKKNPNTTRPIFDQFQKDVEYWGVGYRHGEDA 218

Query: 237 WYNIVSWTHYAMVTAE 252
               ++        + 
Sbjct: 219 LGREINGFIKEFKESG 234


>gi|307701104|ref|ZP_07638129.1| bacterial extracellular solute-binding protein, family 3
           [Mobiluncus mulieris FB024-16]
 gi|307614099|gb|EFN93343.1| bacterial extracellular solute-binding protein, family 3
           [Mobiluncus mulieris FB024-16]
          Length = 278

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 71/260 (27%), Gaps = 20/260 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD---------IKKRG-FLKCGINTGLVGFAEVK 51
            K        ++ L   +    ++              K  G     G +     +    
Sbjct: 4   KKLSAAGCAAILALTLGACGNTSASNDKNHSTDHASAAKAAGEKFTIGFDPNFPPYGYKD 63

Query: 52  AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G++ GFD+D  + ++     +  K    P++   + + L S  +D L          
Sbjct: 64  EKTGEYVGFDIDLAKEVAKR---NEWKFVPQPIDWDAKDMELNSGTVDCLWNGFTINGRE 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN 168
           +      +      +   F+      I+    L+G  + VQA ++    L   D     +
Sbjct: 121 DK---YTWSKPYVDNSIVFVTKTADKITDTKGLAGKHVLVQADSSGLTALENKDNKDLKD 177

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       +      +   DA   D+         +++     I+           
Sbjct: 178 SFASLDQVPDYNQAFMNMESGAADAVAVDVGVANFQVQAHEKGK-FTIMNPPFHTEQYGI 236

Query: 229 AIIQGDTEWYNIVSWTHYAM 248
              +G+    + V      M
Sbjct: 237 GFKKGNESLRDQVQKALDEM 256


>gi|260770435|ref|ZP_05879368.1| ABC glutamine transporter extracellular solute-binding protein
           family 3 [Vibrio furnissii CIP 102972]
 gi|260615773|gb|EEX40959.1| ABC glutamine transporter extracellular solute-binding protein
           family 3 [Vibrio furnissii CIP 102972]
          Length = 263

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 90/241 (37%), Gaps = 10/241 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             S+L    L F + +  A  L  ++++G LK  +      F  V  +    G+D+D   
Sbjct: 7   MSSVLMSASLLFGATTAQADQLESVQQKGVLKVAVPQDFPPFGSVGTDLKPHGYDIDMAG 66

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L+  +     K++ +P+ +  R   LQ+ ++D++  +      RE    + F       
Sbjct: 67  YLAQKL---DVKLELVPVTSANRIPYLQTGKVDLVISSMGKNAEREKV--IDFSAAYAPF 121

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             G      + ++S   LSG +I V  G+  +L L+    +         FE      ++
Sbjct: 122 YLGVFGSSDEAVTSAQDLSGKTIGVTRGSVEDLELSKIAPS---DATIKRFEDNNATLSS 178

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + + +          +  +      P++      ++  SP    +++G+      V+   
Sbjct: 179 FLSGQVSLIATGNLVVTEIATRY--PAKAPQTKFLLKNSPCYVGVMKGEDALLKEVNRLI 236

Query: 246 Y 246
            
Sbjct: 237 T 237


>gi|160903094|ref|YP_001568675.1| extracellular solute-binding protein [Petrotoga mobilis SJ95]
 gi|160360738|gb|ABX32352.1| extracellular solute-binding protein family 3 [Petrotoga mobilis
           SJ95]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 86/257 (33%), Gaps = 24/257 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    LI   F++FS                 G       F  V   G++ GFD
Sbjct: 1   MLKKAFLVSAILISFVFSAFSV------------TYVVGTEASFPPFEYV-EGGEFVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R +      D   ++   ++      +L +  IDI+      T  RE    + F  
Sbjct: 48  MDLIREIGKMYGFD---VEIRDISFDSLIPSLMTGNIDIIVAGMTITEEREKV--VDFTI 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
             Y   Q  ++ K +  +    L    I VQ GTT +L + +         K + I ++ 
Sbjct: 103 PYYSADQSIMVRKGEDTNLTILLRKPKIGVQTGTTGDLWVTENLIDAGFLPKTNLIRYDT 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                        D    D     A + T   P E V +           A+  G+ +  
Sbjct: 163 FNFAVRDLVNKNIDVIVLDNP--VAERFTKTDPVEIVGIIKTN--ENYGMAVAPGNEDLL 218

Query: 239 NIVSWTHYAMVTAEELG 255
           N+++     +  + ++ 
Sbjct: 219 NMLNEGITKLQESGKMD 235


>gi|254253567|ref|ZP_04946884.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124898212|gb|EAY70055.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 290

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++++ + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 31  MKR--LIAVVSIALLAVSAGPAIA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 82

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G  F  
Sbjct: 83  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 137

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 138 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVAYQNQ 195

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   A R DA   D        L + R +    +   +    +        + + D
Sbjct: 196 DGVYADLIAGRLDAALQDEVQAAIGFLKSPRGAGFQFVGPELVDEKVLGVGAGIGLRKED 255

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 256 TDLKAKIDRAILDMV 270


>gi|228477470|ref|ZP_04062106.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
 gi|228250905|gb|EEK10093.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
          Length = 224

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 95/213 (44%), Gaps = 16/213 (7%)

Query: 3   KDFFVSILCLIILFF----TSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA 52
           +   +S++  + +      +S +  +S L        I K+G L  G+   +  F    A
Sbjct: 8   RILAISVIAFLAVLLWNTKSSQADESSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYYSA 67

Query: 53  N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
               ++G ++D  + ++  +     K+ +  +  + R   + +  ID+L      T  R+
Sbjct: 68  KTNTYQGMEIDLAKKIAKEL---KVKVNFTAVTPQTREALMDNGTIDMLIATYTITDERK 124

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF++  K G   +S L+G +I V  G++ +  + +Y  A+N+K+
Sbjct: 125 ASYAM--STPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKAAVEEYASANNLKF 182

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           + +      E+  +  A+R DA+ GD S L   
Sbjct: 183 NYVQLGSYPELAVSLYAYRIDAFAGDKSILSGY 215


>gi|206975631|ref|ZP_03236543.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus H3081.97]
 gi|217958458|ref|YP_002337006.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH187]
 gi|222094599|ref|YP_002528659.1| amino acid ABC transporter , amino acid-binding protein [Bacillus
           cereus Q1]
 gi|229137672|ref|ZP_04266277.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST26]
 gi|229195189|ref|ZP_04321964.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           m1293]
 gi|206746093|gb|EDZ57488.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus H3081.97]
 gi|217068071|gb|ACJ82321.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH187]
 gi|221238657|gb|ACM11367.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus Q1]
 gi|228588418|gb|EEK46461.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           m1293]
 gi|228645787|gb|EEL02016.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST26]
          Length = 265

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|311280246|ref|YP_003942477.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
 gi|308749441|gb|ADO49193.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 86/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  T+                ++         F  + A+    GFD
Sbjct: 1   MKKVLIAALLASVSLSATAAE-------------TIRFATEASYPPFESMDASNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ID +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRIDAVMAGMDITPEREK--QVLFSK 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K    +++ QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFIGQKG-KYATIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +     +ND+       +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKSNDKLASVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNAAL 224


>gi|222086233|ref|YP_002544765.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723681|gb|ACM26837.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 260

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 78/238 (32%), Gaps = 20/238 (8%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           F  +   +            +  G +     +  + A+G   GFD+D   AL   +    
Sbjct: 19  FAGAALADGDS---------IVIGTDATYPPYESLDASGKIVGFDIDIANALCDQM---K 66

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K  ++  +      ALQ+K+ D +  +   T  RE    + F    Y       + K  
Sbjct: 67  IKCTFVNQDFDGIIPALQAKKFDAIVSSMSITPEREK--AIDFTNKYYNTPPAIAVPKDS 124

Query: 136 GISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            I+  +   L G SI  Q+ TT     A+Y  AH       ++   +E        R DA
Sbjct: 125 TIADTTDEALKGKSIGAQSSTTH----ANYATAHLKDAELKLYPSPDEYKLDLSNGRIDA 180

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
              D+  L     ++      ++    I           G  +    +     A +TA
Sbjct: 181 VIDDVVVLSEWVKSDAGSCCKLLGTLKIDPEINGIGAGIGLRKGDTALKDKFNAAITA 238


>gi|116695743|ref|YP_841319.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113530242|emb|CAJ96589.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 267

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 11/258 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +     +L L++L   +F+  A  + +I K+G +  G+ TG   F    A G   G+DVD
Sbjct: 8   RRAAAPVLTLLVLTSAAFTAQAQTVAEIVKKGRVTIGVVTGAPPFGTTDATGKPAGYDVD 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L   +      +  +PL +  R  AL++ ++D L      T  R     + F    
Sbjct: 68  VANLLGKYLG---VPVDIVPLTSPSRIPALEAGKVDFLVATLAPTPERAR--AIMFSAPY 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                          + +++L    + V  GTT +  L           + + FE     
Sbjct: 123 SAFELTIFAPVAAKYARLTELGKKKVGVTRGTTQDTALTRLAV---PGMNIVRFEDDATC 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  +++ +A     +     ++   R +         S  P + A+ +   E    ++
Sbjct: 180 AQALISNQVEAIALPNTT--GNEIMKARGAGKFDAKFAFSVQPNSMAVRRDAFELRQWLN 237

Query: 243 WTH-YAMVTAEELGITQK 259
            T  Y  +  E   I QK
Sbjct: 238 TTISYVKLNGELDAIAQK 255


>gi|292900018|ref|YP_003539387.1| histidine ABC transporter substrate-binding protein [Erwinia
           amylovora ATCC 49946]
 gi|291199866|emb|CBJ46990.1| histidine ABC transporter, substrate-binding protein [Erwinia
           amylovora ATCC 49946]
 gi|312173032|emb|CBX81287.1| Histidine-binding periplasmic protein HBP; Flags: Precursor
           [Erwinia amylovora ATCC BAA-2158]
          Length = 260

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 79/254 (31%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + I    +                L+ G +     F    A G   GFD
Sbjct: 1   MKKQVLALSLLMAITAAGNAFAAGP--------KTLRIGTDPTYAPFEMKNAEGQLTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K  ++  +      +L++K++D +  +   T  R     +AF  
Sbjct: 53  IDLANEICQRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKR--QQEIAFSA 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L G +I +  GTT E      ++   +   P  +   
Sbjct: 108 KLYAANSRLIAPKGSKIQPTLASLKGKTIGLLQGTTQETYANQNWRPQGVTVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D  A     L      ++      I    +        + + +
Sbjct: 166 DLVYQDLTAGRIDAAFQDEVAASEGFLKQPVGKDYAFAGPAIKDEKIFGVGTGIGLSKDN 225

Query: 235 TEWYNIVSWTHYAM 248
                 +      M
Sbjct: 226 PALKAAIDKAFDDM 239


>gi|260424786|ref|ZP_05733292.2| amino acid ABC transporter, permease/substrate-binding protein
           [Dialister invisus DSM 15470]
 gi|260403193|gb|EEW96740.1| amino acid ABC transporter, permease/substrate-binding protein
           [Dialister invisus DSM 15470]
          Length = 305

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 27/289 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS------------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M +   + I     LF +  S              + ++  IKK+G L  G  +G   + 
Sbjct: 27  MIRAVILGIAASAALFVSGCSDGNKAPDQGAVQKESPLMQKIKKQGKLVVGTASGYPPYE 86

Query: 49  EVKAN---GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            +  +       G D+   + ++  +      ++   +N +    +L   ++DI     +
Sbjct: 87  FIDTSVGEKKVIGIDMALAQKIADELGVK---LEVQDMNFQALLTSLTGGKVDIAIAGIN 143

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADY 163
            T  R+    + F        Q  I+ K+       +  L G ++ VQ  TT E    + 
Sbjct: 144 PTEERKK--SMDFSADYLPTEQKVIIRKEDGSRYKKLEDLFGKTVGVQKSTTQEALAKEK 201

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            K        +    V E+    +  + D    +        L  +       +    + 
Sbjct: 202 IK----DTKIVSLAHVPEVVLELKQGKVDGLVVEGIVG-GQYLVFNDDLMFSEVEFPNAV 256

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
              A A+ +G+ +   +V+                   ++ + +  +  
Sbjct: 257 KSSAAAVQKGNEDVVAVVNKVIKENTDNGNFKKWTDEYSRKAVENADKQ 305


>gi|221212306|ref|ZP_03585283.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD1]
 gi|221167405|gb|EED99874.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD1]
          Length = 260

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   A R DA   D        L + R + +  +   +    +        + + D
Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 226 TDLKAKIDRAILDMV 240


>gi|323942777|gb|EGB38942.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E482]
          Length = 243

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  GI+     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T   P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|254720343|ref|ZP_05182154.1| hypothetical protein Bru83_12605 [Brucella sp. 83/13]
 gi|265985360|ref|ZP_06098095.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306837437|ref|ZP_07470313.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
 gi|306840652|ref|ZP_07473404.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
 gi|306845794|ref|ZP_07478362.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
 gi|264663952|gb|EEZ34213.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306273686|gb|EFM55524.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
 gi|306289390|gb|EFM60626.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
 gi|306407480|gb|EFM63683.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
          Length = 257

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 71/246 (28%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAVAEKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +          + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEADASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|220903864|ref|YP_002479176.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868163|gb|ACL48498.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 247

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 78/260 (30%), Gaps = 25/260 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F  ++L L +    + +                   +        +  N    GFD
Sbjct: 1   MIRRFAFALLVLTLFCGQALAAE-----------KYVVATDCTWPPMELLDENKQPVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF   +  A   +   +    +     F  + + Q DI++  T  T  R+      F  
Sbjct: 50  VDFITEVGKAAGFE---VDVRNIAWDGIFGGVATGQYDIVAAATTITPERQK--QFDFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  ++   + I S+  L G  +  Q GTT    +    +   +      ++ V 
Sbjct: 105 PYYEVAQAVVLPAGQNIKSLDDLKGKKVGGQIGTTGVFVI----RKSGVPVDLKEYDDVG 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    R DA   D                +  +      K      + +G T+   
Sbjct: 161 LAIQDMLGGRIDAVICDEPVAMYYANKKADTAGKLNLSFKTAEKEYYGFTVRKGRTDLVE 220

Query: 240 IVSWTHYAM----VTAEELG 255
            ++    A+    V AE L 
Sbjct: 221 KLNKGIKAVKASGVEAELLE 240


>gi|121610413|ref|YP_998220.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121555053|gb|ABM59202.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 274

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 95/307 (30%), Gaps = 65/307 (21%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSK 77
            + +A  +  IK RG L CG+ +  V F+ ++        G+D+D C A++  +   P  
Sbjct: 22  GTASADEIDTIKARGTLICGVGSNTVPFSYIEDPQTRKNVGYDIDLCEAVAKTLGVKPE- 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
                +    R   +Q  ++D+   +   T  R+    ++F       G   I    + +
Sbjct: 81  --LKFVTTATRIPEVQQGRVDLALASVTITPERQEL--ISFSHPHLVTGTAIITPASRPM 136

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            ++S +    + V  G  T   ++           PI F        A    +  A   D
Sbjct: 137 KALSDMENKRVSVIEGGLTGPAVSQKIP----GAKPIGFVTPATAFLALEQGKVQAMAAD 192

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            + L  L      P ++ +  + +    L   + +   +    V+ T             
Sbjct: 193 ETTLLGL--MRSTPGKYAMFNEYLVLEKLGIGVHKERPKLLAAVNQT------------- 237

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
                              L ++KS                    +      +DR  G  
Sbjct: 238 ------------------MLDMEKSGQ----------------AQV-----SYDRWFGAN 258

Query: 318 SELKIPR 324
           S LK  R
Sbjct: 259 SPLKRKR 265


>gi|154246379|ref|YP_001417337.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154160464|gb|ABS67680.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 271

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 10/238 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + S +A+ L DI+KRG ++ G+ TG      V  +G   G+DVD    + + +F+    
Sbjct: 26  VAGSADATSLSDIQKRGKVRIGVLTGAPPMGMVDEHGKPAGYDVDVANLVGT-MFN--LP 82

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+    R  ALQ+ Q+D L      T  R  +  + F           +    K  
Sbjct: 83  VELVPVTPPARIPALQTGQVDFLVATLAPTGERAKT--VMFTTPYSAFNMVVVSGPGKVY 140

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + V  L G  I V  G++ E  L    +A+      +V+E       A  + + D     
Sbjct: 141 NVVGDLKGKRIAVNRGSSQETALR---RANVPGLELVVYEDDATTAQALLSGQVDGTALP 197

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +   AL      PS  + +     +   + A + GD E  + +    Y M  + +L 
Sbjct: 198 STVAAALLKQM--PSAGLQVGQPFFRQGNSMATLPGDFELLHYLDTLIYLMKVSGQLD 253


>gi|228984045|ref|ZP_04144234.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228775725|gb|EEM24102.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 265

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIVGVEGFSQAAELLSSGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|323969573|gb|EGB64861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TA007]
          Length = 243

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|213971201|ref|ZP_03399319.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301382330|ref|ZP_07230748.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302060015|ref|ZP_07251556.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302132166|ref|ZP_07258156.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213924070|gb|EEB57647.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|331017118|gb|EGH97174.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 254

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   +     +     +F+              LK GI      F    A+G   G
Sbjct: 1   MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD +  +AL + +  +    + +  +      AL +++ D L  +   T  R     + F
Sbjct: 49  FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITDER--KQVVDF 103

Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               Y +   F+  K   I       +   L+G S+  Q  T     L D  +       
Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             +++  E       + R DA   D    Y    +    +       ++    +  A+ +
Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDRIGIAVRK 219

Query: 233 GDTEWYNIVSWTHYAMVT 250
           GD      ++     ++ 
Sbjct: 220 GDDPLRERLNVALKEVIA 237


>gi|218247435|ref|YP_002372806.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           8801]
 gi|257061227|ref|YP_003139115.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
 gi|218167913|gb|ACK66650.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8801]
 gi|256591393|gb|ACV02280.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
          Length = 272

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 81/250 (32%), Gaps = 9/250 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  + +  F+      +IL  I++ G +  G     + F      G+W G+ 
Sbjct: 1   MKKTVIALLSLIFLASFSLKVVAETILDKIERTGEMTAGARKDAIPFGYEDEGGNWTGYS 60

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           V+    +   +      P K+ +       RF  +Q++ +D++   T  T  R   +  +
Sbjct: 61  VELIHLIHQELEKSLKKPIKLTFKEATLDNRFEIVQTETVDLVCEATTITQERLKKVDFS 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                        +           LS   I    GTTT+  +   +   + K    V +
Sbjct: 121 LPFFMTGAQFLVKLKDASTFDINGTLSKIPIAFIPGTTTQEIIPQIYPFADWK----VVK 176

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILP-DIISKSPLAPAIIQGDT 235
              E     +     A   D   L   L    + P +  ++P   I+       + + + 
Sbjct: 177 SRREGLLKLKKGEVQAVVSDGVLLVGELVQVGNNPRDFTLIPRQPITTELYGCMLPKNNP 236

Query: 236 EWYNIVSWTH 245
           +W   +    
Sbjct: 237 DWKEFIDNVI 246


>gi|313904156|ref|ZP_07837535.1| extracellular solute-binding protein family 3 [Eubacterium
           cellulosolvens 6]
 gi|313470958|gb|EFR66281.1| extracellular solute-binding protein family 3 [Eubacterium
           cellulosolvens 6]
          Length = 271

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 82/265 (30%), Gaps = 23/265 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF---------STNASILGDIKK-----RGFLKCGINTGLVG 46
           M K     +   ++L   +          + + + + ++ +      G L    N     
Sbjct: 1   MKKILVAVLSLGMMLSLAACGSTENKESNAVSGTSVSNVAELNLVEDGKLHMATNASFPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +     +G ++G DV+    ++  +     ++    +       ++Q+ + DI       
Sbjct: 61  YEMTTDDGGYEGIDVEIATEIAKKLG---LELVVDDMEFSSVITSVQNGKSDIAMAGLTV 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFK 165
              R+    + F        Q  I+ +   I+SV  L  A  I  Q GTT  +  +D  +
Sbjct: 118 NEERKK--NINFTDTYTKGVQSIIVPEDSEIASVDDLGKAKAIGCQEGTTGYIYCSDTEE 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                   I +        A    + DA   D       +          IL    ++  
Sbjct: 176 NGGYGDKAIAYPDGATAVQALTTGKVDAVVIDN---APAQEFVKANKGLKILDTAYAEEE 232

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVT 250
            A  + + +      V+     ++ 
Sbjct: 233 YAIGVSKKNDLLLEAVNKALNELIE 257


>gi|157144750|ref|YP_001452069.1| hypothetical protein CKO_00477 [Citrobacter koseri ATCC BAA-895]
 gi|157081955|gb|ABV11633.1| hypothetical protein CKO_00477 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ + + + L        ++ G +     F+   A GD+ GFD
Sbjct: 1   MKKTVLALSL---LVGLSATAASYAALPQ-----TVRIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QIKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   +      L G  + V  G+T E    D +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSSVQPTIDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A   A          ++++K   + +V
Sbjct: 226 TELKA-------AFDKALSDLRADGTYDKMAKKYFDFNV 257


>gi|116252499|ref|YP_768337.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257147|emb|CAK08242.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 257

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 89/261 (34%), Gaps = 23/261 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F  + +  + LF  S   +               G ++    F  V A+G  +GFD+D
Sbjct: 6   RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL + +    ++  ++  +      AL +K+ D++  +   T  R     + F    
Sbjct: 57  ITKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y       + K   IS V+ L G  I  Q  TT       +           ++   +E 
Sbjct: 112 YNTPPAIAVPKDSTISDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238
                + R DA   D+  L     ++      ++    + K         AI +GD    
Sbjct: 168 KLDVASGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226

Query: 239 NIVSWTHYAMVTAEELGITQK 259
             ++    A+  + E    Q 
Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247


>gi|329770547|ref|ZP_08261925.1| hypothetical protein HMPREF0433_01689 [Gemella sanguinis M325]
 gi|328836296|gb|EGF85965.1| hypothetical protein HMPREF0433_01689 [Gemella sanguinis M325]
          Length = 276

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 79/255 (30%), Gaps = 14/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M     +  L   +L  T  ++            D + +  +  G +   V       +G
Sbjct: 1   MKISKLIITLLSFLLILTGCASGGKDKPQKDNWNDFENQKTIVIGFDNTFVPMGFQDKSG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D    +         K+Q+  +N   +   L++  ID++      T  RE + 
Sbjct: 61  KNIGFDIDLANEVFKKY---NIKVQWQAINWDLKETELKNGNIDLIWNGYSKTSEREKT- 116

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            + F      + Q  +  K K I +  QL    +  Q G++   +     +  K+     
Sbjct: 117 -VLFSDEYMINEQVIVTKKSKNIVNKDQLKDKVLGAQNGSSGYDSFNSNPEILKSIVKNN 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   E        R DA   D           ++  ++ I          A    
Sbjct: 176 DATQYESFNEALIDLENDRIDALLIDRVYANYYLKQQNKLQDYNIFNAGFEGDSFAVGAR 235

Query: 232 QGDTEWYNIVSWTHY 246
           + DT     V+    
Sbjct: 236 KADTTLVKKVNEAFK 250


>gi|49480141|ref|YP_035104.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|52144471|ref|YP_082357.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus E33L]
 gi|228944594|ref|ZP_04106964.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229089914|ref|ZP_04221169.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-42]
 gi|49331697|gb|AAT62343.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51977940|gb|AAU19490.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus E33L]
 gi|228693539|gb|EEL47245.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock3-42]
 gi|228815054|gb|EEM61305.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 265

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|34556715|ref|NP_906530.1| binding protein component ABC transporter [Wolinella succinogenes
           DSM 1740]
 gi|34482429|emb|CAE09430.1| BINDING PROTEIN COMPONENT ABC TRANSPORTER [Wolinella succinogenes]
          Length = 267

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 15/247 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     +L L + +    +    S L  I KRG L+   + G   F      G+  GF
Sbjct: 1   MKKILLGILLALGVAWAADMALWEKSTLNAIIKRGELRVSTDPGYYPFEMKDKKGNVIGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  R ++ A+      +  +  +       L + + D++      T  R  +L +AF 
Sbjct: 61  DIDIAREMAKAMGVK---LVIVQGSFDSLISGLLTDKADLILAGMTITPER--NLKVAFS 115

Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIV 175
              +  GQ  ++     + + +   L      V      T E+      K          
Sbjct: 116 NPYFTIGQTLLVRPDLKEKVKNYKDLDKPEYTVVTKLGVTGEIVARRMMK----NAKIKT 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++   E        + DA+  D        +   +    V L   I+  PL  A+ +GD 
Sbjct: 172 YDTEAEAVQEVLNGKADAFIYDFPFNSTFMMQKGKGL-LVHLDQSITYEPLGIALKKGDP 230

Query: 236 EWYNIVS 242
           ++ N ++
Sbjct: 231 DFLNWLN 237


>gi|190895059|ref|YP_001985352.1| putative amino acid ABC transporter substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190700720|gb|ACE94802.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|327194401|gb|EGE61261.1| putative amino acid ABC transporter substrate-binding protein
           [Rhizobium etli CNPAF512]
          Length = 275

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 79/239 (33%), Gaps = 10/239 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K  F   ++ +  LF  + S   A  L  +K  G LK G  T    F  + A G+  G
Sbjct: 1   MRKNSFLKGLVGVAFLFGATISAHAADTLAAVKAAGTLKVGTETAFAPFDFIDA-GEHVG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +VD    +   +      I+++ L     F AL++ + D+++     T  R       F
Sbjct: 60  LNVDLFNEIGKELGVK---IEWVTLPWDGVFPALEAGKFDVVAGPATITKKR--MERYRF 114

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            P         +       I+    ++G  I V   T     L ++ +    K     + 
Sbjct: 115 TPPLAEATIAILKKAGDKTINKPEDIAGKKIGVGKATAQLDQLKEFSETLPTKVDVREYP 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E  A   A R       +  +          +  V+LP    KS      ++    
Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232


>gi|110801621|ref|YP_699371.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Clostridium perfringens SM101]
 gi|110682122|gb|ABG85492.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens SM101]
          Length = 502

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWK 57
           M K   +  L +  +++     S N++ +         +    +     F  +   G+ K
Sbjct: 1   MKKKLMLLFLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELK 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+VD    +   +  D   +++   +    F  L+S +++ ++     T  RE      
Sbjct: 60  GFEVDVWNEIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYY 114

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     + G   I+ K    I S   L G  + V  G+  E  + D  K  N +   + +
Sbjct: 115 FSEPYVYSGAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTY 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-- 234
           +  +         R DA   D  +  A+    ++     +  + I K   A   ++ +  
Sbjct: 173 QNTDAAFNELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKG 230

Query: 235 TEWYNIVSWTHYAM 248
            +    V+     M
Sbjct: 231 KDLSENVNKALDEM 244


>gi|187730469|ref|YP_001880943.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ
           [Shigella boydii CDC 3083-94]
 gi|187427461|gb|ACD06735.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Shigella boydii CDC 3083-94]
          Length = 243

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKAFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|256851586|ref|ZP_05556975.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus jensenii 27-2-CHN]
 gi|260661010|ref|ZP_05861925.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus jensenii 115-3-CHN]
 gi|282932374|ref|ZP_06337805.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1]
 gi|297206404|ref|ZP_06923799.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus jensenii JV-V16]
 gi|256616648|gb|EEU21836.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus jensenii 27-2-CHN]
 gi|260548732|gb|EEX24707.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus jensenii 115-3-CHN]
 gi|281303488|gb|EFA95659.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1]
 gi|297149530|gb|EFH29828.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus jensenii JV-V16]
          Length = 263

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    + L  I L   + S   S   ++  +G L  G+      ++    NG  KGF+V
Sbjct: 5   KKISLFAGLIAISLGLVACSNQKSTNSEVLNKGTLTVGLEGTYAPYSYR-ENGKLKGFEV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A++         I+++P         L +K+ DI+  +   T  R+      F   
Sbjct: 64  DLAKAVAKKAGYK---IKFVPTKWDSLIAGLGAKKFDIVINDIAMTPERKK--AYTFSTP 118

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     IM K    I S   + G  I    GT     +  +   +      +      
Sbjct: 119 YIYSKSALIMKKTNNTIKSAKDIKGLKIAAATGTANADNVKKFGGQN------VSSTDFS 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEW 237
                 R +R  A      A       +   ++   +    ++ P   +   + +G++  
Sbjct: 173 TAMELIRQNRVVAAMNSKEAFL-YYQKSQHVTDLKYVEIPTNQIPAQEIGIMMSKGNSSL 231

Query: 238 YNIVSWTHY 246
              ++    
Sbjct: 232 QKKINKALN 240


>gi|307945340|ref|ZP_07660676.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Roseibium sp. TrichSKD4]
 gi|307771213|gb|EFO30438.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Roseibium sp. TrichSKD4]
          Length = 258

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 74/220 (33%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       F  + ++G   GFD+D   AL   +  +    +++  +      ALQ+
Sbjct: 27  KVRIGTEGAYPPFNSLTSDGQLVGFDIDIANALCEEMKVE---CEFVTQDWDGMIPALQA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
            + D +  +   T  R     + F    Y       + K   +   +   LSG  +  Q+
Sbjct: 84  GKFDAVIASMSITEER--KQKVDFTNKYYNTPPAIGVPKDSKLAGVTKEDLSGILLGAQS 141

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT       +F          ++   +E        R DA   D+  L     T +   
Sbjct: 142 STTHSNYAEAHFP----DAELKLYPTADEYKLDLENGRIDAVIEDVVVLSDWLATENGAC 197

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             V        +I+      AI +G+ E   + +    A+
Sbjct: 198 CKVLSTLKSDPVINGEGAGIAIRKGEDELKEMFNKAIVAI 237


>gi|116617768|ref|YP_818139.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096615|gb|ABJ61766.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 490

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 96/278 (34%), Gaps = 26/278 (9%)

Query: 3   KDFFVSILCLI----ILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VK 51
           K   + I+ +     +L       +A+     L  IKK+G L  G++     F     V 
Sbjct: 6   KKISIVIMTITMLLPLLAVLPTHADAATTDPALTKIKKKGTLVIGLSADYAPFEFHATVN 65

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 GFDV+  + ++  +   P       +       ALQ+ +ID++    + T  RE
Sbjct: 66  GRDQIVGFDVEMAKKIAKDLGVKP---VIKEMGFDGLIGALQTGKIDVIISGINATPERE 122

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHN 168
               + F        Q  ++ KK        L+   G  I VQ  TT E    +      
Sbjct: 123 KV--VDFSNSYMKPLQTVMVLKKDASKYSGNLNSFSGKKIGVQKQTTQETYAQESM---- 176

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLA 227
                +  ++V ++ A     +      +     A        +  +I P   S    ++
Sbjct: 177 SGSTIVSLQKVPDLVAQLSTGKIAGIVLNEPISKAYTQQ--NKAFKIIYPKPSSGEGAVS 234

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            A+ +        ++ +   ++ + EL   QK  N++ 
Sbjct: 235 IAMPKNSPVLKAKINKSLGNIIKSGELEAYQKRANKLM 272


>gi|237732343|ref|ZP_04562824.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter
           sp. 30_2]
 gi|283832259|ref|ZP_06352000.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Citrobacter youngae ATCC 29220]
 gi|226907882|gb|EEH93800.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter
           sp. 30_2]
 gi|291071900|gb|EFE10009.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Citrobacter youngae ATCC 29220]
          Length = 260

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 93/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ + + + L        ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKTVLALSL---LVGLSATAASYAALPQ-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QIKCTWVASDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    D +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E                EL       ++++    N +V
Sbjct: 226 AELKAAFDKAL------GELRKDGT-YDKMASKYFNFNV 257


>gi|167031269|ref|YP_001666500.1| cystine transporter subunit [Pseudomonas putida GB-1]
 gi|166857757|gb|ABY96164.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 264

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 74/227 (32%), Gaps = 12/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  I+++G +  G+      F+    NG   GF+V+    L+  +       + 
Sbjct: 25  AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEVELSELLAKELGVKA---KI 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138
            P        AL+SK++D++      +  R+     +            +  K  +  I 
Sbjct: 82  QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S   L+G  + V  GT  E  +               +E      A  R  R DA   D 
Sbjct: 142 SAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPSKFADLRNGRIDAILIDR 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A            +  +  D  S+     A+ +G+ E    ++   
Sbjct: 198 LAALEYAQKAK---DTELAGDAFSRLESGVALRKGEPELLAAINKAI 241


>gi|251790578|ref|YP_003005299.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247539199|gb|ACT07820.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 273

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 76/259 (29%), Gaps = 20/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L L   F  S +   S L  +K+ G ++  +      F+ +       GFD
Sbjct: 1   MKKLLALTALALSACFMLSAAQAGSTLERVKQTGVVRNVLFNDYPPFSYLDDKNQLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +                        + D+   +      R     L F  
Sbjct: 61  VDVANAVAKKLGTRLELATPGWETIVGGK---WQGRWDMCICSMTPNAERAKV--LDFST 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177
             Y      I+HK +  I S + LS   + +  G++ E  L         K     F   
Sbjct: 116 PYYSTFAVLIVHKDEKNIQSAADLSNKKVGLGLGSSYENYLNKSLAIPGGKPIDFPFNHV 175

Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                  +            R DA   D            +      L       P   A
Sbjct: 176 QAVPTDEDMAFRNLALGPGKRLDAVISDRITAKPRIEKLPQLRILQQL----YAEPNWIA 231

Query: 230 IIQGDTEWYNIVSWTHYAM 248
           + +GD EW   ++    A+
Sbjct: 232 VDKGDPEWSKTLADAISAL 250


>gi|227875261|ref|ZP_03993403.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus mulieris ATCC 35243]
 gi|306818523|ref|ZP_07452246.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Mobiluncus mulieris ATCC 35239]
 gi|227844166|gb|EEJ54333.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus mulieris ATCC 35243]
 gi|304648696|gb|EFM45998.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Mobiluncus mulieris ATCC 35239]
          Length = 305

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 70/260 (26%), Gaps = 20/260 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD---------IKKRG-FLKCGINTGLVGFAEVK 51
            K        ++ L   +    ++              K  G     G +     +    
Sbjct: 31  KKLSAAGCAAILALTLGACGNTSASNDKNHSTDHASAAKAAGEKFTIGFDPNFPPYGYKD 90

Query: 52  AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G++ GFD+D  + ++     +  K    P++   + + L S  +D L          
Sbjct: 91  EKTGEYVGFDIDLAKEVAKR---NEWKFVPQPIDWDAKDMELNSGTVDCLWNGFTINGRE 147

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN 168
           +      +      +   F+      I+    L+G  + VQA ++    L   D     +
Sbjct: 148 DK---YTWSKPYVDNSIVFVTKTADKITDTKGLAGKHVLVQADSSGLTALENKDNKDLKD 204

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       +      +   DA   D+          ++     I+           
Sbjct: 205 SFASLDQVPDYNQAFMNMESGAADAVAVDVGVANFQVQAREKGK-FTIMNPPFHTEQYGI 263

Query: 229 AIIQGDTEWYNIVSWTHYAM 248
              +G+    + V      M
Sbjct: 264 GFKKGNESLRDQVQKALDEM 283


>gi|288574034|ref|ZP_06392391.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569775|gb|EFC91332.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 257

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 94/255 (36%), Gaps = 24/255 (9%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGD 55
           M+K      F+S + L +    S +     L DI KRG +   + +     F  V  +GD
Sbjct: 4   MFKTSASVRFISSVFLTVFLSASCAWAGDRLDDIVKRGEMVVAVGDFENEPFFFV-EDGD 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ-----SKQIDILSRNTDWTLLR 110
             GFDVD  R ++  I  D   ++++ +                 + D+   +      R
Sbjct: 63  LVGFDVDLGRMIAKEIGVD---VRFVRVPWDGLIALAWYSRYPWSRYDMAIASITIRQSR 119

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                  F    ++ GQ  ++ ++ G  +   L G +I V AG+T   T      A    
Sbjct: 120 TR--ACDFSDWYFYTGQKLLVREEDGYETPLDLEGKTIAVMAGSTGYETAKRDLAA---- 173

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +V +  +E   A RA R D    D + + A     D     V L  +++       +
Sbjct: 174 -QTVVMDSPQETVDALRAGRVDGALSDATIVIAAAERYDG---LVALEGMVTTERYGVVL 229

Query: 231 IQGDTEWYNIVSWTH 245
            +G+ +   +V    
Sbjct: 230 PKGEEDLRKVVDSVV 244


>gi|327393261|dbj|BAK10683.1| glutamine-binding periplasmic protein precursor GlnH [Pantoea
           ananatis AJ13355]
          Length = 248

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 20/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   +  + L F+  +T A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSLFNVSVAALALAFSLSATAAE--------KKLIVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ++ +D+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTRNVDLALAGITITDERKK--AIEFSDGY 107

Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I S++ L+G  + V++GT +     DY K+H        F  ++ 
Sbjct: 108 YKSGLLVMVRNNENDIKSINDLNGKVVAVKSGTGSV----DYAKSHIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  +R DA   D   +     T  +      + D I       A  +G  +    V
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFINTAGKGR-FKAVGDSIEAQQYGIAFPKGSDDLREKV 222

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 223 NGALKTLKE 231


>gi|322516686|ref|ZP_08069597.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
 gi|322124787|gb|EFX96220.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
          Length = 224

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 20/224 (8%)

Query: 2   YKDFF----VSILCLIILFFTSF--STNASI--------LGDIKKRGFLKCGINTGLVGF 47
           +K       V+ L ++ +F  S   +             +  I KRG L  G+   +  F
Sbjct: 3   FKKILRYLTVACLAIVTIFLISSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNF 62

Query: 48  AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
               A    ++G +VD  + ++  +     K+ Y+P+  + R   + +  ID+L      
Sbjct: 63  GYYSAKTNSYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              R+ S  +      Y D  GF++ K   I+ +S L+G +I V  G +T+  L +Y  A
Sbjct: 120 NDERKASYAI--SDPYYHDQIGFLVLKNSDINKISDLNGKTIGVSQGASTKAALQEYASA 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           HN+K++ +      E+  +  AHR +A++ D S L   +    +
Sbjct: 178 HNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTK 221


>gi|320333844|ref|YP_004170555.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM
           21211]
 gi|319755133|gb|ADV66890.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           maricopensis DSM 21211]
          Length = 251

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 81/245 (33%), Gaps = 24/245 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   ++ L LI       S +A+ L      G LK G+      F          GFDVD
Sbjct: 5   RTLMIAALALI------TSASAATLEK----GVLKIGMEGTYPPFTYKDEQNQLVGFDVD 54

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +A+++ +     K +++          LQ+ + D++      T  R+ S+   F    
Sbjct: 55  IAKAVAAKLG---LKTEFVLTEWSGILAGLQANKYDVIVNQVGVTAERQKSIA--FSTPY 109

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +     I+ K       +++ L G  + V  G+  E  L D         + + +    
Sbjct: 110 AYSSAQIIVRKNDNAAYKTLASLKGKRVGVGLGSNYEKMLRDA-----GGINVVTYPGAS 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        R DA   D   +      +           I     +A A+ + +T+    
Sbjct: 165 EYLRDLAVGRLDAALNDR-LMVGYFAKSQNLPV-KGAGVIEDPQAIAIALKKTNTDLKAK 222

Query: 241 VSWTH 245
           +    
Sbjct: 223 IDRAL 227


>gi|295699112|ref|YP_003607005.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia sp. CCGE1002]
 gi|295438325|gb|ADG17494.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1002]
          Length = 260

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 89/255 (34%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L + ++   S   +A     I      + G++     F    A+G   GFD
Sbjct: 1   MKK--LLAALTVALIATVSIGAHAKDWSTI------RFGVDASYPPFESKGADGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 53  IDLGNEICKRVG---AKCVWVENDFDGMIPALKAKKFDGVLSSMSMTPQRAEQVA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  +  GI  +   L G S+ V+ GT  E     Y++        + ++  
Sbjct: 108 KLFNTPTRLVAKQGSGILPTAESLKGKSVGVEQGTIQETYAKTYWEPKG--AKVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++ A   + R DA   D        L   R +    +   +    +        + + D
Sbjct: 166 DQVYADLISGRLDAALQDAVQAEQGFLKTPRGAGFAFVGQNLDDPKILGNGAGIGMRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    V      M+
Sbjct: 226 TDLKAKVDKAIADMI 240


>gi|293603253|ref|ZP_06685684.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292818342|gb|EFF77392.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 275

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 103/278 (37%), Gaps = 15/278 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M       I  + +    + + +A  + DIK RG   CG       F+          G+
Sbjct: 1   MKTTIASFIAAVGVAATLAPAAHADTVQDIKARGKFICGTMGTAEPFSFQDPKTRAIVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD C+A++ ++      ++   +  + R   L + ++D+++ N  W    E +  + + 
Sbjct: 61  EVDMCQAVADSLG---VPLELKLIAVEARIPELIAGRVDVVAANLGW--SPERAQQIDYS 115

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  +    +K + + + L+G  I    G+++E       + +     P+ F+ 
Sbjct: 116 HQHFVSLQKILARESEKDLKAPADLAGKRISAVRGSSSEQ----GARKNIPNVEPVTFKD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                 A +  +   + G    L  L+           IL   +   P    + +GDT  
Sbjct: 172 PSGAFLALQQGKVSGFVGSELMLVKLQHQAASSAVPVKILQPALFVEPWGMGVRKGDTAM 231

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
            N V+     M   E  G   K  ++     T  +++R
Sbjct: 232 LNQVNKVLDGM---EASGQATKVFDKWFGTGTQFNMKR 266


>gi|228922904|ref|ZP_04086201.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228836760|gb|EEM82104.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 259

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58
           M K   +S   ++I+   S  +N         +  L  G +     +  V+A+   +  G
Sbjct: 1   MKKLVSISFALILIVSIFSACSNGEPKERKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  + +   +  +   ++   ++      +L S ++D +      T  R+    + F
Sbjct: 61  FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I +      +  K   I SV  L G  + VQ G+  E   A++     + +     +R
Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI    +A R +A   + +             + + + +   +   A A+ +   +  
Sbjct: 174 IPEIVQEIKAGRFEAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232

Query: 239 NIVSWTHYAMVTAE 252
                        E
Sbjct: 233 EFNKVIKKMQENGE 246


>gi|269964162|ref|ZP_06178459.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio harveyi 1DA3]
 gi|269831117|gb|EEZ85279.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio harveyi 1DA3]
          Length = 243

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 89/258 (34%), Gaps = 25/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+       S NA+   +IK        +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLV-------SANAAAQEEIK------FAMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K+  ++    L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 217

Query: 239 NIVSWTHYAMVTAEELGI 256
           N ++     +    E  +
Sbjct: 218 NKLNTALKTVKANGEYDV 235


>gi|253686637|ref|YP_003015827.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251753215|gb|ACT11291.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 255

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 72/246 (29%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   L    L  TS   +A  L DIK  G LK G       +     +G   GFD
Sbjct: 1   MKKIRF--ALLTSALLATSVFAHADDLSDIKSAGVLKIGTEGTYAPYTYHDKSGQLVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +      I+            + +K+ D +      T  R+      F  
Sbjct: 59  VDIGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKERQA--KYDFSK 113

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++      +   S L G     Q+ T+     A  + A       +  +  
Sbjct: 114 PYIDSKAVLVVRGDNTTLKDFSDLKGKK-AAQSLTSNYSKQATSYGA-----DIVPTDGF 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K          I        P A  + +       
Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKNQATLVE 226

Query: 240 IVSWTH 245
            ++   
Sbjct: 227 ALNKAL 232


>gi|170016503|ref|YP_001727422.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803360|gb|ACA81978.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 288

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 19/252 (7%)

Query: 4   DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
               +++ L +++ T+ +     +   L  ++K G +  G+      F  +    G  +G
Sbjct: 15  IVLAAVIVLGLMWATATAKQNEAHQDTLARVEKLGRIVWGVKADTKLFGLMNTKTGKPEG 74

Query: 59  FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           FD+D  +AL+  I      P   +++P++A  +   +++  ID        T+  E    
Sbjct: 75  FDIDIAKALTVQISKQTGVPMSAEFVPVSASSKMQLIKNTNIDGSVS--TMTITPEREKI 132

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    +  GQ  ++ K  GI+SV  ++    +I V  GTT    +A +          
Sbjct: 133 IDFTNQYFDAGQSILVKKDSGINSVKDMNDSKYTIIVVVGTTAATEIAKFAPKAK----V 188

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +       A ++ +  A + D + LY     N    ++ I     +  P   A    
Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---DYHIAGGTFTHGPYGIAFDNN 245

Query: 234 DTEWYNIVSWTH 245
                   +   
Sbjct: 246 QKPMIREANKAL 257


>gi|23098331|ref|NP_691797.1| amino acid ABC transporter substrate-binding protein
           [Oceanobacillus iheyensis HTE831]
 gi|22776557|dbj|BAC12832.1| amino acid ABC transporter substrate-binding protein
           [Oceanobacillus iheyensis HTE831]
          Length = 296

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 79/267 (29%), Gaps = 28/267 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----------------LGDIKKRGFLKCGINTG 43
           M K      + + IL   +   +                       +++ G L  G +  
Sbjct: 5   MKKVMLSLFVLMFILLLAACGASEETGETPENSDNEETASDERWESVQQSGELVVGTSGT 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L+  +      +  G+DV+  + ++  +     +I++  +       A+QS +ID+ + +
Sbjct: 65  LIAASYYDDEDELTGYDVEIMKEIAKRL---DVEIKFEIMGIDSMLPAVQSGRIDLAAND 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
            + T  R+     +      +           GI S+  L G      A TT    +A++
Sbjct: 122 IEITDKRKEQFNFSEPYKYSYATMAVRESDNSGIESLEDLEGKKAGGGA-TTIYSQIAEH 180

Query: 164 FKAHNMKYHPIVFER-VEEID-AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           + A       + +     E   +     R D    D                H+      
Sbjct: 181 YGA-----EVVTYGNAPNEAYLSDVSNGRTDVVVNDYYLTKFGVAAFPDFDLHLHPTIKF 235

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             S     + +        ++     M
Sbjct: 236 HPSQQGVIMPKDADVMTEEINNVLQEM 262


>gi|327393303|dbj|BAK10725.1| arginine-binding periplasmic protein 1 precursor ArtI [Pantoea
           ananatis AJ13355]
          Length = 246

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 77/213 (36%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  V AN   +GFDVD   AL   +    +   +          +L+ 
Sbjct: 25  TIRIATEASYPPFEFVDANNKIQGFDVDLANALCKEM---DATCTFTNQAFDSLIPSLKF 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D +    D T  RE    + F    Y +   F+  K   ++SV  L G  + VQ GT
Sbjct: 82  RRFDAVMAGMDITPEREK--QVLFSKPYYDNSAIFVAQKG-KVASVEALKGKRVGVQNGT 138

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L D     +     + ++  +      +  R DA  GD + +      N    P 
Sbjct: 139 THQKYLTD----KHADITVVPYDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNANLAPV 194

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       + L  A+ QG+TE  +  +   
Sbjct: 195 GEKVTDKAYFGTGLGIAVRQGNTELQSKFNTAL 227


>gi|116751367|ref|YP_848054.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700431|gb|ABK19619.1| extracellular solute-binding protein, family 3 [Syntrophobacter
           fumaroxidans MPOB]
          Length = 258

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 83/248 (33%), Gaps = 13/248 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61
           K       CL +L   + +        +++RG L  G       F        +++GFDV
Sbjct: 5   KRMVGLWTCLFLLTLPAVAAADDSWSKVQQRGELIVGFCAQYPPFESKNEKTAEFEGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A++  +      ++++    +     L+    D+L      +  R  +  +    +
Sbjct: 65  DLGKAVARQMGVK---VKFVDAEWQGLLAGLKKGDYDVLITCMSKSEAR--NENVNMSDV 119

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y      ++ + + +      L G  + VQ G+ +E  LAD  +          +    
Sbjct: 120 YYTLPDVIVVRQDESVIRDRDGLKGKIVGVQLGSGSEQ-LADKNREL--FKEIKRYNYNP 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E     +  R DA                    + ++   ++++ +     +G       
Sbjct: 177 EAFTDLKHKRIDAVIVG---YAYAVNQIKTDPSYKVVGKPLAEADIVIVAARGADALTAR 233

Query: 241 VSWTHYAM 248
           ++ +  A+
Sbjct: 234 INQSLSAV 241


>gi|270262832|ref|ZP_06191103.1| hypothetical protein SOD_c04570 [Serratia odorifera 4Rx13]
 gi|270043516|gb|EFA16609.1| hypothetical protein SOD_c04570 [Serratia odorifera 4Rx13]
          Length = 260

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 86/251 (34%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVS-ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  ++  +    ++F+   S          LK G +     F    A G+  GF
Sbjct: 1   MKKLVKVLPLVLALSAVSSAFAALPST---------LKIGTDPTYAPFESKNAKGELVGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L   I    ++  ++  +      +L++K+ID +  +   T  R     +AF 
Sbjct: 52  DIDLAKELCKRI---NTQCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFT 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K   +      L G S+ V  GTT E      ++   +    + ++ 
Sbjct: 107 DKLYAANARLIAPKGSKLLPTVDALKGKSVGVLQGTTQEAYANAMWQPKGI--TVVPYQN 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            + + A   + R DA   D  A     L      ++    + +             + + 
Sbjct: 165 QDLVYADLASGRIDAAFQDEVAGSDGFLKQPPGKDYAFAGESVKDDKFFGVGTGMGLRKT 224

Query: 234 DTEWYNIVSWT 244
           DTE    +   
Sbjct: 225 DTELKAALDKA 235


>gi|197118313|ref|YP_002138740.1| polar amino acid/opine ABC transporter periplasmic amino
           acid-binding protein [Geobacter bemidjiensis Bem]
 gi|197087673|gb|ACH38944.1| polar amino acid/opine ABC transporter, periplasmic amino
           acid-binding protein [Geobacter bemidjiensis Bem]
          Length = 248

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 75/249 (30%), Gaps = 18/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++++        + +  A           +    +        V AN    GFD
Sbjct: 1   MKAIRIMAVVVAFAGLCFASAALA-------APKTVTVATDATWPPMEFVDANKKIVGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF  A++           +        F  + + Q D +  +   T  R+      F  
Sbjct: 54  IDFMNAVAKEAGFQA---SFKNTAWDGIFAGIAAGQYDAIISSVTITDERKA--KFDFTV 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                GQ  ++ K +  + +  L G  I  Q GTT  + +               ++ V 
Sbjct: 109 PYISIGQILVVPKAEKGTKIGDLKGKKIGAQIGTTGAMEIKKVA-----GVELKTYDEVG 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  A R      D        L   +  ++  I+    +K      + +G+ E  +
Sbjct: 164 LAFEDMAAGRISGVVCDQPTAVTYALDKKEYSNKFKIVGQPFTKEAYGIVVKKGNKELVD 223

Query: 240 IVSWTHYAM 248
            ++    A+
Sbjct: 224 QLNKGIAAV 232


>gi|332162248|ref|YP_004298825.1| arginine-binding periplasmic protein 2 precursor [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606311|emb|CBY27809.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666478|gb|ADZ43122.1| arginine-binding periplasmic protein 2 precursor [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330860382|emb|CBX70692.1| arginine-binding periplasmic protein 2 [Yersinia enterocolitica
           W22703]
          Length = 249

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 84/250 (33%), Gaps = 19/250 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL  ++   T+  T  S          ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLLAAILSGMVFSATAAETTHSTE-------TIRFAASATYPPFESIGANNEIVGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 54  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FSQ 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS + L G  I ++ GTT +  L D           + ++  +
Sbjct: 109 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +T   
Sbjct: 164 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLAAVGEHVTDPQYFGTGLGIAVRPDNTALL 223

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 224 EKLNKAIDAV 233


>gi|196249836|ref|ZP_03148532.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           G11MC16]
 gi|196210712|gb|EDY05475.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           G11MC16]
          Length = 273

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 77/254 (30%), Gaps = 15/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI---KKRG-FLKCGINTGLVGFAEVKANGDWK 57
            K F V+++  + +   +   +          K+    +  G +     F  +   G   
Sbjct: 5   KKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYM-EKGKVV 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD D   A+      D        +     F +LQSK+ID+       T  R+      
Sbjct: 64  GFDADLLDAVMKEAGLDYE---LKNIGWDPLFASLQSKEIDMGISGITITDKRK--QSYD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +   Q  ++ +   + +   L G +I VQ  TT +      F       H   FE
Sbjct: 119 FSAPYFEATQVILVKEGSPVKNALDLKGKTIGVQNATTGQEAAEKLF---GKGEHIKKFE 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTE 236
                         DA   D +        N      VI  PD  +         + D++
Sbjct: 176 TSVVAIMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPK-DSD 234

Query: 237 WYNIVSWTHYAMVT 250
               V      ++ 
Sbjct: 235 LKAKVDEALKNIIE 248


>gi|239834092|ref|ZP_04682420.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239822155|gb|EEQ93724.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 257

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 74/246 (30%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLLTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+++ +   P    ++          L +K+ D +      T  R+      F  
Sbjct: 61  VEIGEAVAAKLGVKPE---FVEGKWDGLIAGLDAKRYDAVINQVGITEERQK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKKSA-QSLTSNYGKLAKEAGA-----ELVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    K    +     ++ +  +       + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSFLDFKKHQPKAPV-KVVAEKENADASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|88800984|ref|ZP_01116534.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
 gi|88776251|gb|EAR07476.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
          Length = 254

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 83/277 (29%), Gaps = 27/277 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++ +      + +  A     I+       G++     F     +G   GF+
Sbjct: 1   MEQKMKKTLVAIAGALALTSAVEAKDWDTIRA------GVDAPYPPFEYKAPDGTLTGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    +   I       +++          L +++ D++  +      R+    + F  
Sbjct: 55  IELGNEVCKEITGKE--CEWVIQAWDGIIPGLLARKYDMIFSSMSINEERQK--RVLFSD 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     F           +   G  I VQ  T  +  + ++          + +   +
Sbjct: 111 PYYTTPSAFFSA---NAFDPADADGKRIGVQRATIQDTYVTEFLD----DAEIVRYTTAD 163

Query: 181 EIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           ++    +  R DA   D      +        +  + V  P  I    +  A  + D + 
Sbjct: 164 DMVVDLQGGRLDAMFVDAPVGLEMLGEDSDIVQVGDFVKEPVRIFGEGVGAAFRKRDKDL 223

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              VS        A E        +++     + D++
Sbjct: 224 EEAVS-------AALEKVKASGKYDEIMNRYFDFDIK 253


>gi|260768891|ref|ZP_05877825.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           furnissii CIP 102972]
 gi|260616921|gb|EEX42106.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           furnissii CIP 102972]
 gi|315180585|gb|ADT87499.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio furnissii NCTC 11218]
          Length = 258

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 79/231 (34%), Gaps = 14/231 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ GI      F+  +A+G  KGFDVD   AL   +     + + +P +      
Sbjct: 22  KEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCKEM---QVQCKIVPQDWDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           +L +++ D +      T  R+    + F          FI  K   +    + L G  I 
Sbjct: 79  SLLARKYDAIIAAMSITEERKK--KVDFTNKYALIPNKFIAKKGAQLDFTKEGLKGVKIG 136

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           VQ  TT +  L D +         + +   +E        R  A  GD SAL    L   
Sbjct: 137 VQRATTHDKYLTDNY---GDAVEIVRYGSFDEAYLDLANGRIAAVLGDASALEDGVLNKP 193

Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +  +   ++           A  + D +    ++    A+    E  
Sbjct: 194 GGEGYEFVGPSLTDPKWFGDGFGIATRKQDKDLTEKLNAAIDALRAKGEYQ 244


>gi|256027993|ref|ZP_05441827.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11]
 gi|289765938|ref|ZP_06525316.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11]
 gi|289717493|gb|EFD81505.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11]
          Length = 253

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 95/259 (36%), Gaps = 18/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V ++ ++ +       N   +  I KRG L  G  +    F  +  NG+ K +D
Sbjct: 1   MKKILIVLLIAIVSVISY---ANNDGVEKILKRGVLYVGTTSDYKPFTYI-ENGEHKSYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + ++  +      ++++P   K     LQ+ + DI       T  R+    +    
Sbjct: 57  IEVAKLIAKELGVK---VEFVPTTWKTLLDDLQAGKFDIAMGGITRTTKRQAICNM--TN 111

Query: 121 ITYFDGQGFIMHK--KKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                G+ F++ K  K   +S+  +      + V  G T E  + +Y          I +
Sbjct: 112 PYLVFGKCFLVRKGDKNKYNSLEAVNKPNVRVGVNIGGTNEALVNEYITKA----TVIRY 167

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   ++  A      D    +       +  N +  E  +L   ++KS +   I + +  
Sbjct: 168 KNNLDVPVALEKGEVDVMITETPEAITYQKNNPK-LEGALLDKTLTKSQMGYMIAKENQH 226

Query: 237 WYNIVSWTHYAMVTAEELG 255
             N V++    +    E+ 
Sbjct: 227 LLNTVNFILSELELRGEIE 245


>gi|229028649|ref|ZP_04184763.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1271]
 gi|228732668|gb|EEL83536.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1271]
          Length = 265

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    +S  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVSKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSSPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +        R D +T +        L   + ++  I+      S       
Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 229 KGSDKLVQEVNKAL 242


>gi|110798792|ref|YP_696773.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding
           protein/permease [Clostridium perfringens ATCC 13124]
 gi|168208796|ref|ZP_02634421.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens B str. ATCC 3626]
 gi|168212869|ref|ZP_02638494.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens CPE str. F4969]
 gi|168215721|ref|ZP_02641346.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens NCTC 8239]
 gi|110673439|gb|ABG82426.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens ATCC 13124]
 gi|170713169|gb|EDT25351.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715496|gb|EDT27678.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens CPE str. F4969]
 gi|182382310|gb|EDT79789.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens NCTC 8239]
          Length = 502

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWK 57
           M K   +  L +  +++     S N++ +         +    +     F  +   G+ K
Sbjct: 1   MKKKLMLLFLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELK 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+VD    +   +  D   +++   +    F  L+S +++ ++     T  RE      
Sbjct: 60  GFEVDVWNEIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYY 114

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     + G   I+ K    I S   L G  + V  G+  E  + D  K  N +   + +
Sbjct: 115 FSEPYVYSGAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTY 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-- 234
           +  +         R DA   D  +  A+    ++     +  + I K   A   ++ +  
Sbjct: 173 QNTDAAFNELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKG 230

Query: 235 TEWYNIVSWTHYAM 248
            +    V+     M
Sbjct: 231 KDLSENVNKALDEM 244


>gi|329770428|ref|ZP_08261810.1| hypothetical protein HMPREF0433_01574 [Gemella sanguinis M325]
 gi|328836551|gb|EGF86211.1| hypothetical protein HMPREF0433_01574 [Gemella sanguinis M325]
          Length = 273

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 100/283 (35%), Gaps = 24/283 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55
           M K   F  SI+ +  L   S S++ + L ++K +G +  G++     +  +     N  
Sbjct: 1   MKKLILFITSIITVFTLTACSSSSSKNKLEEVKSKGKIVLGVSPDYAPYEFLTTENGNKK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+     ++  +     +++   +       +L + ++D++    + T  R+    
Sbjct: 61  VVGADIYLAEQIAKKL---DVEVEIQEMGFDSLIASLNANKVDMVISGINPTDERKK--A 115

Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F  + Y     F+++K    I SV  L    + VQ G+T E    +  K    + +  
Sbjct: 116 VDFSDVYYTGKGIFVVNKDSDEIKSVDDLKNKKVGVQKGSTYETYAKEQLKIA--ESNIQ 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAI 230
               V  +    +  + D            K+  ++ S+  I        P    +A A 
Sbjct: 174 SLTDVPSLLQDLKNKKIDVVLIPDDV---AKIAMNKYSDIKISSFTADNDPEATGMAIAF 230

Query: 231 IQGDT----EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
            +G      E    V+     +   +E         Q++  + 
Sbjct: 231 KKGKDDSNKELLEQVNSVIKEIQEKKEFEKQLDKYAQIAAQSE 273


>gi|322419251|ref|YP_004198474.1| family 3 extracellular solute-binding protein [Geobacter sp. M18]
 gi|320125638|gb|ADW13198.1| extracellular solute-binding protein family 3 [Geobacter sp. M18]
          Length = 247

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 79/249 (31%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++ +  + L F S +  A           +    +        V AN    GFD
Sbjct: 1   MKSLRIMAAVLALGLCFVSAALAAP--------KAITVASDATWPPMEFVDANKKIVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF  A++        ++ +        F  +++ Q D +  +   T  R+      F  
Sbjct: 53  IDFMTAVAKEAG---LQVTFKNTAWDGIFAGVEAGQYDAIISSVTITPERQA--KYDFTA 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                GQ  ++ K +  + ++ L G  I  Q GTT  + +               ++ V 
Sbjct: 108 PYVNIGQILVVPKAEKGTKIADLKGKKIGAQIGTTGAMEVKKVA-----GVELKTYDEVG 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  A R      D        L      ++  I+    +K      + +G+ +   
Sbjct: 163 LAFEDMAAGRIAGVVCDEPTAVTYALQKKEYSTKFKIVGKPFTKEAYGIVVKKGNKDLVA 222

Query: 240 IVSWTHYAM 248
            ++    A+
Sbjct: 223 QLNKGIAAV 231


>gi|229131788|ref|ZP_04260662.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST196]
 gi|228651682|gb|EEL07645.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST196]
          Length = 265

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + N   L  IK+ G L  G       F     
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTANQDALQKIKQSGELVIGTEGTYPPFTFHDT 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           N    GFDV+    ++  +   P    +           + +K+ D+++         + 
Sbjct: 61  NDKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGIDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSSPYISSSAALVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +      + R D +T +        L   + ++  I+      S       
Sbjct: 170 EITGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 229 KGSDKLVQEVNKAL 242


>gi|222082457|ref|YP_002541822.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727136|gb|ACM30225.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 275

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 77/239 (32%), Gaps = 10/239 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +      ++    LF  + S   A  L  +K  G LK G  T    F  + A G+  G
Sbjct: 1   MKRNSLLKGLVGAAFLFGATLSAHAADTLAAVKAAGTLKVGTETAFAPFDFIDA-GEHAG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +VD    +   +      I+++ L     F AL++ + DI++     T  R       F
Sbjct: 60  LNVDLFAEIGKELGVK---IEWVALPWDGVFPALEAGKFDIVAGPATITKKR--MERYRF 114

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            P         +       I+    ++G  I V   T+    L ++      K     + 
Sbjct: 115 TPPIAEATIAILKKAGDTTINKPEDIAGKKIGVGKATSQLDQLKEFSDTLPTKAEIREYP 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E  A   A R       +  +          +  V+LP    KS      ++    
Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232


>gi|283784630|ref|YP_003364495.1| arginine ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
 gi|282948084|emb|CBG87649.1| arginine ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFIGQQG-KFTSVEQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAPVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LQQKFNAAL 224


>gi|224827116|ref|ZP_03700212.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224600625|gb|EEG06812.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 254

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 74/251 (29%), Gaps = 25/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +        L  L   S +              L+   +     F++   +G   GFD
Sbjct: 1   MKQPLLTLGALLCALTAASHAE------------TLRFATDASYPPFSQQGPDGKMAGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  RAL +A+          P +      AL +K+ D++  + + T  R+    + F  
Sbjct: 49  PDIARALCAAM---KVTCDVEPQDFDGIIPALNAKKFDVIIASMNITDERKK--AVNFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +      ++      G  I V   +  E    D++         + + +  
Sbjct: 104 KYYNMPSRLVAKAGTAVNDA-WFKGKKIGVLRSSIQEKYARDHWVKLG--AKLVPYGKAP 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           E     +A R DA   D +      L               +++         A+ + D 
Sbjct: 161 ESFLDLKAGRVDASFVDAAVGDTDFLKTANGKGFAFAGPAYNEAKYFGEGAGIAVRKTDA 220

Query: 236 EWYNIVSWTHY 246
                ++    
Sbjct: 221 ALLERINKALK 231


>gi|302024591|ref|ZP_07249802.1| amino-acid ABC transporter extracellular-binding protein
           [Streptococcus suis 05HAS68]
          Length = 202

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 15/205 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+    ++ + L     ++    ST+ ++L  IK+ G ++ G       ++    +G   
Sbjct: 1   MFTSLLLAGIVLAACNSSAGISNSTDQTLLAQIKEEGVIQIGTEGAYAPYSYHDESGKLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DV+   A++  +      ++++          L + + D ++     T  R+      
Sbjct: 61  GYDVEVAEAVAEKLGVK---VEFVETEWDSMIAGLDAARFDTIANQVGITDERKA--KYD 115

Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     +     +  K    I+S + LSG        +      AD  + +      +  
Sbjct: 116 FSTPYTYIYGALVTQKDNTDITSFADLSGKKSANSLTS----NWADLARENG--AEVVGV 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201
           +   +        R DA   D    
Sbjct: 170 DGFSQAVELLNTGRVDATINDNLVY 194


>gi|182435530|ref|YP_001823249.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776167|ref|ZP_08235432.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
 gi|178464046|dbj|BAG18566.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326656500|gb|EGE41346.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 307

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 75/238 (31%), Gaps = 15/238 (6%)

Query: 15  LFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALS 68
              T  +     L        K+RG L  G             A  +  GFD++  + ++
Sbjct: 45  ALPTYTAAKDVTLDSPVFKKAKERGKLVIGAKADQPYLGFEDQATKERSGFDIEIAKMIA 104

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           + +     +I++  +++  R  A+   Q+D           R+  +G  F    Y  G  
Sbjct: 105 ADLGFSDKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVG--FAGPYYKAGAD 162

Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            ++ K     +    + G  +C   G+T    +             +   +  +      
Sbjct: 163 LLVRKDDKSITGKDSVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLL 218

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + DA T D S L           +  ++ D  +  P    + + D      +S + 
Sbjct: 219 TKQVDAVTTDDSILKGYAAA--NSGKLHVVGDPFTDEPYGVGLNKDDKVLREAISKSL 274


>gi|289168796|ref|YP_003447065.1| ABC transporter substrate-binding protein [Streptococcus mitis B6]
 gi|288908363|emb|CBJ23205.1| ABC transporter substrate-binding protein [Streptococcus mitis B6]
          Length = 268

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 16/261 (6%)

Query: 2   YKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
            K   +++  L++L   F   +  ++ +  IK +G L   +N     F     V      
Sbjct: 4   IKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+++ +  +   ++  P++      ++QS + D+       T  R      
Sbjct: 64  VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K       SV+ L+   +  Q G+  E    D           +
Sbjct: 119 DFSVPYYTSKNKVIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              +   +    ++ + DA   +          N   +   I  D       A A+ +  
Sbjct: 175 SLPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEIEFDQEKDDSYAVAMKKDS 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E    V      +  + +L 
Sbjct: 235 KELKAAVDQAIQKLKDSGDLE 255


>gi|170683620|ref|YP_001742971.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Escherichia coli SMS-3-5]
 gi|170521338|gb|ACB19516.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli SMS-3-5]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDRLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|18311075|ref|NP_563009.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|18145757|dbj|BAB81799.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
          Length = 502

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWK 57
           M K   +  L +  +++     S N++ +         +    +     F  +   G+ K
Sbjct: 1   MKKKLMLLFLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELK 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+VD    +   +  D   +++   +    F  L+S +++ ++     T  RE      
Sbjct: 60  GFEVDVWNEIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYY 114

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     + G   I+ K    I S   L G  + V  G+  E  + D  K  N +   + +
Sbjct: 115 FSEPYVYSGAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTY 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-- 234
           +  +         R DA   D  +  A+    ++     +  + I K   A   ++ +  
Sbjct: 173 QNTDAAFNELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKG 230

Query: 235 TEWYNIVSWTHYAM 248
            +    V+     M
Sbjct: 231 KDLSENVNKALDEM 244


>gi|269978150|ref|ZP_06185100.1| polar amino acid ABC transporter periplasmic substrate-binding
           protein [Mobiluncus mulieris 28-1]
 gi|269933659|gb|EEZ90243.1| polar amino acid ABC transporter periplasmic substrate-binding
           protein [Mobiluncus mulieris 28-1]
          Length = 278

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 70/260 (26%), Gaps = 20/260 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD---------IKKRG-FLKCGINTGLVGFAEVK 51
            K        ++ L   +    ++              K  G     G +     +    
Sbjct: 4   KKLSAAGCAAILALTLGACGNTSASNDKNHSTDHASAAKAAGEKFTIGFDPNFPPYGYKD 63

Query: 52  AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G++ GFD+D  + ++     +  K    P++   + + L S  +D L          
Sbjct: 64  EKTGEYVGFDIDLAKEVAKR---NEWKFVPQPIDWDAKDMELNSGTVDCLWNGFTINGRE 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN 168
           +      +      +   F+      I+    L+G  + VQA ++    L   D     +
Sbjct: 121 DK---YTWSKPYVDNSIVFVTKTADKITDTKGLAGKHVLVQADSSGLTALENKDNKDLKD 177

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       +      +   DA   D+          ++     I+           
Sbjct: 178 SFASLDQVPDYNQAFMNMESGAADAVAVDVGVANFQVQAREKGK-FTIMNPPFHTEQYGI 236

Query: 229 AIIQGDTEWYNIVSWTHYAM 248
              +G+    + V      M
Sbjct: 237 GFKKGNESLRDQVQKALDEM 256


>gi|228938117|ref|ZP_04100737.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228970992|ref|ZP_04131629.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228977595|ref|ZP_04137987.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis Bt407]
 gi|228782239|gb|EEM30425.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis Bt407]
 gi|228788801|gb|EEM36743.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821602|gb|EEM67607.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326938618|gb|AEA14514.1| cystine-binding protein [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 265

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 76/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D +T +        L   + ++  I+      S       
Sbjct: 170 EIIGVEGFSQAAELLASGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|229016184|ref|ZP_04173136.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1273]
 gi|229022420|ref|ZP_04178958.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1272]
 gi|228738901|gb|EEL89359.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1272]
 gi|228745138|gb|EEL95188.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1273]
          Length = 265

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F     
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDT 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           N    GFDV+    ++  +   P    +           + +K+ D+++         + 
Sbjct: 61  NDKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGIDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSSPYISSSAALVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +      + R D +T +        L   + ++  I+      S       
Sbjct: 170 EITGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 229 KGSDKLVQEVNKAL 242


>gi|170740012|ref|YP_001768667.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168194286|gb|ACA16233.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 273

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 76/235 (32%), Gaps = 12/235 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
              A+   +IK RG L  G+ T    F    A+    G+DVD  R  + ++  +   +  
Sbjct: 29  PAEAATPDEIKARGKLVVGVLTDYPPFGGTDADQKPAGYDVDVARLFAKSLGVELDLVP- 87

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             +    R   L + ++D+L      T  R  S  + F           +  K   +S  
Sbjct: 88  --VTGPNRIPYLLTNKVDMLIATFGITAER--SKQVLFSNPYSTLSTYVLGPKSLAVSKP 143

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G +I V   +T +  ++            + F+       A  + +  +     + 
Sbjct: 144 EDLKGVTIGVARASTQDTAVSAVAP---PGTRIMRFDDDATTTQAIISGQVQSIGASNTV 200

Query: 201 LYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           L  L       +   I P    +      A  + DT   +  +     +    EL
Sbjct: 201 LAQL---TKDYASLGIEPKFNLREQANGMAFRKADTALRDRANAFIAEIAGNGEL 252


>gi|322373064|ref|ZP_08047600.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C150]
 gi|321278106|gb|EFX55175.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. C150]
          Length = 283

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 79/256 (30%), Gaps = 18/256 (7%)

Query: 1   MYKDFFVS----------ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K                        + F+T         K   +K G +   V     
Sbjct: 1   MKKIVKTVLLGCLVLLPLFALSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + NG + GFD+D   A+      D   +++  ++   +   L++  ID++      T  R
Sbjct: 61  EKNGSYVGFDIDLATAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169
           +      F      + Q  +  K  GI SV+ +SG ++  QAG++         K     
Sbjct: 118 K--QSADFTEPYMINEQVLVTKKSSGIDSVAGMSGKTLGAQAGSSGYDAFNASPKILKNI 175

Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + +    +      + R D    D          +    ++ ++P        A
Sbjct: 176 VANQKAVQYSTFTQALIDLESGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235

Query: 228 PAIIQGDTEWYNIVSW 243
               + D      ++ 
Sbjct: 236 VGARKSDKTLITKINQ 251


>gi|198242827|ref|YP_002216427.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|207857773|ref|YP_002244424.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|197937343|gb|ACH74676.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|206709576|emb|CAR33921.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
          Length = 260

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A G++ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKALI------ELRQDGT-YDKMAKKYFDFNV 257


>gi|150398048|ref|YP_001328515.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150029563|gb|ABR61680.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 275

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 85/273 (31%), Gaps = 28/273 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F    + +  L F + +     L  +  +  +    N+G    + +  + +  GFD
Sbjct: 1   MKGLFAKLAIGVAALAFVTAAQAGETLDRVMGKKAMVVATNSGWPPQSFLDDSNELVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   + +   +           + D+   +   T  R  +  + F  
Sbjct: 61  IDVSKEIAKRLGVE---VSFETPDWATLTGGRWQGRYDLGVGSVTPTKAR--AQVIDFVG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF---- 176
           I YF    +++HK     SV  L+G  I V+  TT+E  +    +       PI +    
Sbjct: 116 IYYFSPYVYVLHKDSQAKSVGDLNGKKIGVETATTSEDFIRRRLEIDAPGLPPIEYKIEP 175

Query: 177 ---ERVEEI---DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPL 226
                  +        R     R DA                      +L  +   + PL
Sbjct: 176 GEVRTYADSMLPFDDLRIGDGTRLDAVIAPE---QTALNAIKNGYPLRVLEGEYAFREPL 232

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                + D +W   V          EE+     
Sbjct: 233 VVIAEKVDPDWTKKVGAVI------EEMKTDGT 259


>gi|47640|emb|CAA24651.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|154124|gb|AAA75577.1| LAO protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 260

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A G++ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   +  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPVQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257


>gi|242241096|ref|YP_002989277.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242133153|gb|ACS87455.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 256

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 77/246 (31%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L + +L     S     L  IK  G +K G       +     +G   GFD
Sbjct: 1   MKK-VSSALLSVALLTTAFASHAQDDLSAIKAAGVIKFGTEGTYAPYTYHDQSGKLVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  RA++  +        ++          + +K+ D +      T  R+      F  
Sbjct: 60  VEIGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKERQA--KFDFSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I +  +L G     Q+ T+    LA  + A+      +  +  
Sbjct: 115 PYIDARSVLIVRGDNTTIKNFDELKGRKSA-QSLTSNYSKLATSYGAN-----IVPTDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K          ++    S  P A  + +   +   
Sbjct: 169 NQSLELVLSGRADATLNDNLSFLDFKKHKPDA-NVKVVATAESGDPSAILVRKNQPQLVE 227

Query: 240 IVSWTH 245
            ++   
Sbjct: 228 ALNSAL 233


>gi|190895140|ref|YP_001985433.1| putative amino acid ABC transporter substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190700801|gb|ACE94883.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 282

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 88/243 (36%), Gaps = 15/243 (6%)

Query: 2   YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            + F       + + FT  S      A+ L +IKK+G +  GI T    F+ + A+G  +
Sbjct: 10  RRTFLAFSSLALAIAFTGASHIRQAGAATLDEIKKKGTITFGIVTDQPPFSFINASGQNE 69

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+D  + ++  +  +     Y+P+ +  R   L + ++D+L          + +  + 
Sbjct: 70  GYDIDLSKLMAKELGVEA---AYVPITSANRIPQLMTGKVDMLICVMGV--YPDRAKVVQ 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +              K  G++ V +LSG SI V+ G++ +  + D             F+
Sbjct: 125 YVAPYAEINAAIYGPKDGGVTKVEELSGHSIAVEKGSSMDKAVTDAAPK---DATIQRFD 181

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  A  + + +           ++          I+   +S      A+     E 
Sbjct: 182 DASSAVQALLSGQVEYLGSYSHQFGGVEKAAPGKYAQKIV---LSTEYEGIAVRPKSEEL 238

Query: 238 YNI 240
              
Sbjct: 239 GKW 241


>gi|82777621|ref|YP_403970.1| arginine 3rd transport system periplasmic binding protein [Shigella
           dysenteriae Sd197]
 gi|309785094|ref|ZP_07679727.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617]
 gi|81241769|gb|ABB62479.1| arginine 3rd transport system periplasmic binding protein [Shigella
           dysenteriae Sd197]
 gi|308927464|gb|EFP72938.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLEAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|326803928|ref|YP_004321746.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650155|gb|AEA00338.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 280

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 87/218 (39%), Gaps = 11/218 (5%)

Query: 35  FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            ++ G+      F       G+ +GFD+D  + L+  I    ++ +++ + +K R   L+
Sbjct: 43  KIRWGVKVDTNLFGFYNIEKGEVEGFDIDIAKELTKRIVGPNAQAEFVEVTSKTRIPLLK 102

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           +  ID +      +  R+    + F  I +  GQ  ++     +  V  L    ++    
Sbjct: 103 NANIDAIIATMTISDERKK--QVDFSDIYFNAGQALLVGPDVKLKGVEDLGPDHTVLAVK 160

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T+   + ++          +  E   E   A ++ +  A T D + L  +  + + P 
Sbjct: 161 GSTSAQRIKEHAPEAK----VLELENYSEAFTALKSGQGQAMTTDNAILLGI--SKENP- 213

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           ++ I     ++ P   A+ +G  ++   ++     MV 
Sbjct: 214 DYHIAGSTFTREPYGIAVNKGQDDFRQAINQGLKDMVA 251


>gi|270261144|ref|ZP_06189417.1| hypothetical protein SOD_a03690 [Serratia odorifera 4Rx13]
 gi|270044628|gb|EFA17719.1| hypothetical protein SOD_a03690 [Serratia odorifera 4Rx13]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I +  ++                ++         F  + A    +GFD
Sbjct: 1   MKKLIIAAVLAGISVSASAAE-------------TIRFATEASYPPFEFIDAGNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I  D     +          +L+ K+ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEIQAD---CTFTNQAFDSLIPSLKFKRFDAVMAGMDITPEREK--QVLFTK 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++ V+ L G  + VQ GTT +  L D           + ++  +
Sbjct: 103 PYYDNSALFVAQKG-KVADVAALKGKKVGVQNGTTHQKYLTDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD + +          +   +   +  K      L  A+ Q +TE
Sbjct: 158 NAILDLKNGRVDAVFGDTAVVNEWLKQ--NAALAAVGDKVTDKDYFGTGLGIAVRQKNTE 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LQGKFNAAL 224


>gi|116748259|ref|YP_844946.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697323|gb|ABK16511.1| extracellular solute-binding protein, family 3 [Syntrophobacter
           fumaroxidans MPOB]
          Length = 268

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 19/255 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M++    ++    +L     +           S+L  + KR  L  G+      F     
Sbjct: 1   MFRKCLSALWVPALLLTCGIAFAVTPFEVFDGSVLNQVIKRNKLMVGMEVKFFPFEYADE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G   GFDV+     +  +  +   ++   +       ALQ  ++D++      TL R  
Sbjct: 61  KGRPLGFDVEIAGLAAKELGVE---LEIKDMEFSGLIPALQGGKVDMIISGMTRTLTRAK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMK 170
           ++                  +   +  V +L   G  I V+ GTT +L  A  F      
Sbjct: 118 TVSFTQAYFETGLCALLSNRRAPDVKDVKELNAPGRVIAVKLGTTGDLVTAKMFPEA--- 174

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                ++            R DA+  D   L   K   + P     +    +  P A AI
Sbjct: 175 -QVNRYKEETACVREVVTGRADAFLYD--QLSIGKHHKENPDTTHAVLTPFTYEPFAIAI 231

Query: 231 IQGDTEWYNIVSWTH 245
            +GD ++ N ++   
Sbjct: 232 RKGDPDFLNWLNQFL 246


>gi|91225767|ref|ZP_01260796.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio alginolyticus 12G01]
 gi|91189656|gb|EAS75931.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio alginolyticus 12G01]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 89/258 (34%), Gaps = 25/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+       S NA+   +IK        +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLV-------SANAAAQEEIK------FAMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K+  ++    L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGDHVTNPKYFGNGFGIAVNKGNDELV 217

Query: 239 NIVSWTHYAMVTAEELGI 256
           N ++     +    E  +
Sbjct: 218 NKLNTALKTVKANGEYDV 235


>gi|325272375|ref|ZP_08138773.1| cystine transporter subunit [Pseudomonas sp. TJI-51]
 gi|324102500|gb|EGB99948.1| cystine transporter subunit [Pseudomonas sp. TJI-51]
          Length = 264

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 73/229 (31%), Gaps = 12/229 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +     L  I+++G +  G+      F+    NG   GF+V+    L+  +       
Sbjct: 23  CQAFAGEELKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA--- 79

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKG 136
           +  P        AL+SK++DI+      +  R+     +            +  K  +  
Sbjct: 80  KIQPTKWDGILAALESKRLDIVVNQVTISEERKKKYDFSEPYTISGIQALILKKKAEQLN 139

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+    L+G  + V  GT  E  +               +E      A  R  R DA   
Sbjct: 140 INGAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPSKFADLRNGRIDAILI 195

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D  A            +  +     S+     A+ +G+ E    ++   
Sbjct: 196 DRLAALEYAQKAK---DTELAGPAFSRLESGVALRKGEPELLAAINKAI 241


>gi|26246886|ref|NP_752926.1| arginine-binding periplasmic protein 1 [Escherichia coli CFT073]
 gi|91209897|ref|YP_539883.1| arginine-binding periplasmic protein 1 [Escherichia coli UTI89]
 gi|110641064|ref|YP_668794.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli
           536]
 gi|110804860|ref|YP_688380.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 5 str. 8401]
 gi|117623043|ref|YP_851956.1| arginine transporter subunit [Escherichia coli APEC O1]
 gi|191172067|ref|ZP_03033611.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli F11]
 gi|193069380|ref|ZP_03050335.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli E110019]
 gi|194433081|ref|ZP_03065363.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Shigella dysenteriae 1012]
 gi|215485994|ref|YP_002328425.1| arginine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218557767|ref|YP_002390680.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli S88]
 gi|218688645|ref|YP_002396857.1| arginine ABC transporter subunit periplasmic-binding protein
           [Escherichia coli ED1a]
 gi|218699239|ref|YP_002406868.1| arginine ABC transporter subunit periplasmic-binding protein
           [Escherichia coli IAI39]
 gi|218704290|ref|YP_002411809.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           coli UMN026]
 gi|227884173|ref|ZP_04001978.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli
           83972]
 gi|237707173|ref|ZP_04537654.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA]
 gi|293404168|ref|ZP_06648162.1| arginine ABC transporter [Escherichia coli FVEC1412]
 gi|293409238|ref|ZP_06652814.1| arginine ABC transporter [Escherichia coli B354]
 gi|298379951|ref|ZP_06989556.1| arginine ABC transporter [Escherichia coli FVEC1302]
 gi|300901230|ref|ZP_07119331.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 198-1]
 gi|300935046|ref|ZP_07150078.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 21-1]
 gi|300991843|ref|ZP_07179668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 200-1]
 gi|300993467|ref|ZP_07180409.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 45-1]
 gi|301020603|ref|ZP_07184680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 69-1]
 gi|301051209|ref|ZP_07198038.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 185-1]
 gi|312969070|ref|ZP_07783277.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75]
 gi|331646131|ref|ZP_08347234.1| arginine-binding periplasmic protein 1 [Escherichia coli M605]
 gi|331651881|ref|ZP_08352900.1| arginine-binding periplasmic protein 1 [Escherichia coli M718]
 gi|331656936|ref|ZP_08357898.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206]
 gi|331662275|ref|ZP_08363198.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143]
 gi|331682372|ref|ZP_08382991.1| arginine-binding periplasmic protein 1 [Escherichia coli H299]
 gi|26107286|gb|AAN79469.1|AE016758_73 Arginine-binding periplasmic protein 1 precursor [Escherichia coli
           CFT073]
 gi|91071471|gb|ABE06352.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli
           UTI89]
 gi|110342656|gb|ABG68893.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli
           536]
 gi|110614408|gb|ABF03075.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 5 str. 8401]
 gi|115512167|gb|ABJ00242.1| arginine transporter subunit [Escherichia coli APEC O1]
 gi|190907594|gb|EDV67189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli F11]
 gi|192957333|gb|EDV87781.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli E110019]
 gi|194418578|gb|EDX34665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Shigella dysenteriae 1012]
 gi|215264066|emb|CAS08408.1| arginine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218364536|emb|CAR02218.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli S88]
 gi|218369225|emb|CAR16980.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218426209|emb|CAR07033.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli ED1a]
 gi|218431387|emb|CAR12265.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli UMN026]
 gi|226898383|gb|EEH84642.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA]
 gi|227838925|gb|EEJ49391.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli
           83972]
 gi|284920716|emb|CBG33779.1| arginine ABC transporter, substrate-binding protein [Escherichia
           coli 042]
 gi|291428754|gb|EFF01779.1| arginine ABC transporter [Escherichia coli FVEC1412]
 gi|291469706|gb|EFF12190.1| arginine ABC transporter [Escherichia coli B354]
 gi|294494173|gb|ADE92929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli IHE3034]
 gi|298279649|gb|EFI21157.1| arginine ABC transporter [Escherichia coli FVEC1302]
 gi|300297116|gb|EFJ53501.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 185-1]
 gi|300305453|gb|EFJ59973.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 200-1]
 gi|300355304|gb|EFJ71174.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 198-1]
 gi|300398621|gb|EFJ82159.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 69-1]
 gi|300406581|gb|EFJ90119.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 45-1]
 gi|300459709|gb|EFK23202.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 21-1]
 gi|307552706|gb|ADN45481.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli
           ABU 83972]
 gi|312286472|gb|EFR14385.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75]
 gi|315287305|gb|EFU46716.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 110-3]
 gi|315292538|gb|EFU51890.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 153-1]
 gi|315299388|gb|EFU58640.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 16-3]
 gi|320177803|gb|EFW52789.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Shigella boydii ATCC 9905]
 gi|320196642|gb|EFW71265.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli WV_060327]
 gi|323190685|gb|EFZ75954.1| arginine-binding periplasmic protein 1 [Escherichia coli RN587/1]
 gi|323953433|gb|EGB49299.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H252]
 gi|323958152|gb|EGB53861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H263]
 gi|324009771|gb|EGB78990.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 57-2]
 gi|324013025|gb|EGB82244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 60-1]
 gi|330910643|gb|EGH39153.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli AA86]
 gi|331044883|gb|EGI17010.1| arginine-binding periplasmic protein 1 [Escherichia coli M605]
 gi|331050159|gb|EGI22217.1| arginine-binding periplasmic protein 1 [Escherichia coli M718]
 gi|331055184|gb|EGI27193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206]
 gi|331060697|gb|EGI32661.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143]
 gi|331080003|gb|EGI51182.1| arginine-binding periplasmic protein 1 [Escherichia coli H299]
 gi|332088878|gb|EGI93990.1| arginine-binding periplasmic protein 1 [Shigella boydii 5216-82]
 gi|332091087|gb|EGI96177.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae
           155-74]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|16128831|ref|NP_415384.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|74311407|ref|YP_309826.1| arginine 3rd transport system periplasmic binding protein [Shigella
           sonnei Ss046]
 gi|82543351|ref|YP_407298.1| arginine 3rd transport system periplasmic binding protein [Shigella
           boydii Sb227]
 gi|89107714|ref|AP_001494.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|157156637|ref|YP_001462061.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli E24377A]
 gi|157160386|ref|YP_001457704.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli HS]
 gi|170080522|ref|YP_001729842.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|187732757|ref|YP_001880940.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Shigella boydii CDC 3083-94]
 gi|188494716|ref|ZP_03001986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli 53638]
 gi|191166170|ref|ZP_03028004.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli B7A]
 gi|193064432|ref|ZP_03045513.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli E22]
 gi|194438380|ref|ZP_03070470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli 101-1]
 gi|209918112|ref|YP_002292196.1| arginine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218553449|ref|YP_002386362.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           coli IAI1]
 gi|218694337|ref|YP_002402004.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli 55989]
 gi|238900122|ref|YP_002925918.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|253774107|ref|YP_003036938.1| cationic amino acid ABC transporter periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160978|ref|YP_003044086.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|256021016|ref|ZP_05434881.1| arginine transporter subunit [Shigella sp. D9]
 gi|256023510|ref|ZP_05437375.1| arginine transporter subunit [Escherichia sp. 4_1_40B]
 gi|260843114|ref|YP_003220892.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli O103:H2 str. 12009]
 gi|260854155|ref|YP_003228046.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli O26:H11 str. 11368]
 gi|260867036|ref|YP_003233438.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli O111:H- str. 11128]
 gi|293414144|ref|ZP_06656793.1| arginine transport system substrate-binding protein [Escherichia
           coli B185]
 gi|293433161|ref|ZP_06661589.1| arginine-binding periplasmic protein 1 [Escherichia coli B088]
 gi|297516292|ref|ZP_06934678.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli OP50]
 gi|300817037|ref|ZP_07097256.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 107-1]
 gi|300824004|ref|ZP_07104126.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 119-7]
 gi|300902396|ref|ZP_07120379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 84-1]
 gi|300921106|ref|ZP_07137490.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 115-1]
 gi|300924472|ref|ZP_07140442.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 182-1]
 gi|300929327|ref|ZP_07144801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 187-1]
 gi|300947046|ref|ZP_07161268.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 116-1]
 gi|300957067|ref|ZP_07169312.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 175-1]
 gi|301027623|ref|ZP_07190944.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 196-1]
 gi|301305365|ref|ZP_07211460.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 124-1]
 gi|301325871|ref|ZP_07219304.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 78-1]
 gi|301646303|ref|ZP_07246193.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 146-1]
 gi|307137491|ref|ZP_07496847.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli H736]
 gi|307311749|ref|ZP_07591389.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|309795342|ref|ZP_07689760.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 145-7]
 gi|331641384|ref|ZP_08342519.1| arginine-binding periplasmic protein 1 [Escherichia coli H736]
 gi|331667237|ref|ZP_08368102.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271]
 gi|331676651|ref|ZP_08377347.1| arginine-binding periplasmic protein 1 [Escherichia coli H591]
 gi|2507362|sp|P30859|ARTI_ECOLI RecName: Full=Putative ABC transporter arginine-binding protein 2;
           Flags: Precursor
 gi|1651396|dbj|BAA35577.1| arginine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1787088|gb|AAC73950.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|73854884|gb|AAZ87591.1| arginine 3rd transport system periplasmic binding protein [Shigella
           sonnei Ss046]
 gi|81244762|gb|ABB65470.1| arginine 3rd transport system periplasmic binding protein [Shigella
           boydii Sb227]
 gi|157066066|gb|ABV05321.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli HS]
 gi|157078667|gb|ABV18375.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli E24377A]
 gi|169888357|gb|ACB02064.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|187429749|gb|ACD09023.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Shigella boydii CDC 3083-94]
 gi|188489915|gb|EDU65018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli 53638]
 gi|190903779|gb|EDV63494.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli B7A]
 gi|192928894|gb|EDV82507.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli E22]
 gi|194422604|gb|EDX38601.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli 101-1]
 gi|209911371|dbj|BAG76445.1| arginine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218351069|emb|CAU96773.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360217|emb|CAQ97767.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia coli IAI1]
 gi|238860009|gb|ACR62007.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|242376679|emb|CAQ31391.1| artI, subunit of arginine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325151|gb|ACT29753.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972879|gb|ACT38550.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|253977093|gb|ACT42763.1| arginine transporter subunit [Escherichia coli BL21(DE3)]
 gi|257752804|dbj|BAI24306.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli O26:H11 str. 11368]
 gi|257758261|dbj|BAI29758.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli O103:H2 str. 12009]
 gi|257763392|dbj|BAI34887.1| arginine 3rd transport system periplasmic binding protein ArtI
           [Escherichia coli O111:H- str. 11128]
 gi|260449990|gb|ACX40412.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli DH1]
 gi|291323980|gb|EFE63402.1| arginine-binding periplasmic protein 1 [Escherichia coli B088]
 gi|291434202|gb|EFF07175.1| arginine transport system substrate-binding protein [Escherichia
           coli B185]
 gi|299879259|gb|EFI87470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 196-1]
 gi|300316152|gb|EFJ65936.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 175-1]
 gi|300405543|gb|EFJ89081.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 84-1]
 gi|300411957|gb|EFJ95267.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 115-1]
 gi|300419357|gb|EFK02668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 182-1]
 gi|300453329|gb|EFK16949.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 116-1]
 gi|300462746|gb|EFK26239.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 187-1]
 gi|300523515|gb|EFK44584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 119-7]
 gi|300530389|gb|EFK51451.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 107-1]
 gi|300839383|gb|EFK67143.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 124-1]
 gi|300847385|gb|EFK75145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 78-1]
 gi|301075460|gb|EFK90266.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 146-1]
 gi|306908304|gb|EFN38803.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|308120992|gb|EFO58254.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 145-7]
 gi|309701141|emb|CBJ00439.1| arginine ABC transporter, substrate-binding protein [Escherichia
           coli ETEC H10407]
 gi|315060148|gb|ADT74475.1| arginine transporter subunit [Escherichia coli W]
 gi|315135512|dbj|BAJ42671.1| arginine transporter subunit [Escherichia coli DH1]
 gi|315257899|gb|EFU37867.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 85-1]
 gi|315619870|gb|EFV00389.1| arginine-binding periplasmic protein 1 [Escherichia coli 3431]
 gi|320175303|gb|EFW50409.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Shigella dysenteriae CDC 74-1112]
 gi|323155763|gb|EFZ41932.1| arginine-binding periplasmic protein 1 [Escherichia coli EPECa14]
 gi|323159685|gb|EFZ45664.1| arginine-binding periplasmic protein 1 [Escherichia coli E128010]
 gi|323165796|gb|EFZ51582.1| arginine-binding periplasmic protein 1 [Shigella sonnei 53G]
 gi|323172170|gb|EFZ57808.1| arginine-binding periplasmic protein 1 [Escherichia coli LT-68]
 gi|323175515|gb|EFZ61110.1| arginine-binding periplasmic protein 1 [Escherichia coli 1180]
 gi|323185173|gb|EFZ70538.1| arginine-binding periplasmic protein 1 [Escherichia coli 1357]
 gi|323379294|gb|ADX51562.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli KO11]
 gi|323942780|gb|EGB38945.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E482]
 gi|323947113|gb|EGB43124.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H120]
 gi|323962976|gb|EGB58548.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H489]
 gi|324015939|gb|EGB85158.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Escherichia coli MS 117-3]
 gi|324116077|gb|EGC10001.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1167]
 gi|331038182|gb|EGI10402.1| arginine-binding periplasmic protein 1 [Escherichia coli H736]
 gi|331065593|gb|EGI37486.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271]
 gi|331075340|gb|EGI46638.1| arginine-binding periplasmic protein 1 [Escherichia coli H591]
 gi|332097032|gb|EGJ02015.1| arginine-binding periplasmic protein 1 [Shigella boydii 3594-74]
 gi|332104595|gb|EGJ07941.1| arginine transporter subunit [Shigella sp. D9]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|323339298|ref|ZP_08079588.1| glutamate ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Lactobacillus ruminis ATCC
           25644]
 gi|323093282|gb|EFZ35864.1| glutamate ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Lactobacillus ruminis ATCC
           25644]
          Length = 276

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 81/260 (31%), Gaps = 24/260 (9%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEV-- 50
           M K+        ++ +C + L        +S   + ++K    L  G +     F     
Sbjct: 1   MKKNMIKKFTFGIASVCALGLILCGCGKKSSDNSVQEVKDNKTLTIGTSADFAPFEFPIV 60

Query: 51  -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                +  G+D+   + ++  +      ++ +          L++ ++D++      T  
Sbjct: 61  KNGKKEITGYDIMIAQKVADKLGVK---LKIVNTEFPSLISELKNDKVDLVLSGMTKTAK 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           RE    + F    Y      ++ KK     + +S   G  I  Q  TT E  +    K  
Sbjct: 118 REKV--VDFSKPYYTVENVMLVQKKDADKYNKISDTKGKQIGAQQSTTQEDIIKKQMKGA 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SP 225
           N+    +      E     +  + D    + +        N        +     K    
Sbjct: 176 NLVTESVTTSLATE----LKNGKIDGLVLENAIANNYVKQNPGKYAIAKVKLTTGKDIES 231

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
            + A  +GD +   +V+   
Sbjct: 232 YSVAAKKGDKKLIKVVNKVI 251


>gi|163938763|ref|YP_001643647.1| extracellular solute-binding protein [Bacillus weihenstephanensis
           KBAB4]
 gi|229010278|ref|ZP_04167487.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           DSM 2048]
 gi|229165790|ref|ZP_04293558.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH621]
 gi|163860960|gb|ABY42019.1| extracellular solute-binding protein family 3 [Bacillus
           weihenstephanensis KBAB4]
 gi|228617791|gb|EEK74848.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH621]
 gi|228750973|gb|EEM00790.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           DSM 2048]
          Length = 265

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + N   L  IK+ G L  G       F     
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTANQDALQKIKQSGELVIGTEGTYPPFTFHDT 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           N    GFDV+    ++  +   P    +           + +K+ D+++         + 
Sbjct: 61  NDKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGIDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSSPYISSSAALVVAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +      + R D +T +        L   + ++  I+      S       
Sbjct: 170 EITGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 229 KGSDKLVQEVNKAL 242


>gi|323937970|gb|EGB34232.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1520]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAALGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|187932424|ref|YP_001887466.1| amino acid ABC transporter [Clostridium botulinum B str. Eklund
           17B]
 gi|187720577|gb|ACD21798.1| amino acid ABC transporter [Clostridium botulinum B str. Eklund
           17B]
          Length = 278

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 29/263 (11%)

Query: 2   YKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFAE 49
            K   V  +  + +     + N            AS+L  IK++G L  G +     +  
Sbjct: 7   KKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSADYPPYEF 66

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              V       GFD+   ++L+  +  +   +Q   ++     +ALQ+ ++D++      
Sbjct: 67  HKEVDGKDQIVGFDISIAKSLAEDLGVE---LQINDMDFDGLLIALQAGKVDMVFAGMTP 123

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+      F  I Y    G I+ K  +  I S+  L    I VQ G+  E    +  
Sbjct: 124 TDERKE--NADFSDIYYTAQHGVIVRKGEEGKIKSIDDLKDKKIGVQKGSIQERLANEKI 181

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK 223
                K       +V ++    + ++ DA   ++         N      +VIL D    
Sbjct: 182 PDAQKK----ALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGG 237

Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246
           S  A A+ +G  +  + ++ T  
Sbjct: 238 S--AIAMSKGSDDLKSEINKTIQ 258


>gi|104779494|ref|YP_605992.1| cystine transporter subunit [Pseudomonas entomophila L48]
 gi|95108481|emb|CAK13175.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Pseudomonas entomophila L48]
          Length = 264

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 73/227 (32%), Gaps = 12/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  I+++G +  G+      F+    NG   GF+V+    L+  +       + 
Sbjct: 25  AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEVELSELLAKELGVKA---KV 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138
            P        AL+SK++D++      +  R+     +            +  K  +  I 
Sbjct: 82  QPTKWDGILAALESKRLDVVINQVTISEERKKKYDFSEPYTISGIQALILKKKAEQLNIK 141

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +   L+G  + V  GT  E  +               +E      A  R  R DA   D 
Sbjct: 142 TAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPTKFADLRNGRIDAILIDR 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A            +  +     S+     A+ +G+ E    ++   
Sbjct: 198 LAALEYAQKAK---DTELAGAPFSRLESGVALRKGEPELLEALNKAI 241


>gi|328544436|ref|YP_004304545.1| ABC transporter, substrate binding protein (Amino acid)
           [Polymorphum gilvum SL003B-26A1]
 gi|326414178|gb|ADZ71241.1| ABC transporter, substrate binding protein (Amino acid)
           [Polymorphum gilvum SL003B-26A1]
          Length = 257

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 15/233 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K    ++ G       F  + ++G   GFD+D  +AL   +  +    +++  +    
Sbjct: 20  QAKDWSKVRIGTEGAYPPFNNLTSDGQLVGFDIDIAKALCEEMKVE---CEFITQDWDGI 76

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGA 146
             ALQ+ + D +  +   T  R+    + F    Y       + K   I  ++ + L G 
Sbjct: 77  IPALQAGKFDAIIASMSITDERKQM--VDFTNKYYNTPPAIAVPKDSPIAGTTDADLKGK 134

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I  Q+ TT     ++Y +         ++   +E        R DA   D+  L     
Sbjct: 135 VIGAQSATTH----SNYAEEKLTSAQIKLYPTADEYKLDVANGRIDAVIDDVVVLSDWLA 190

Query: 207 TNDRPSEH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           T D         +    +I+      AI + D     + +    A+  + +  
Sbjct: 191 TADGACCKLLGTLKPDPVINGEGAGIAIRKEDQNLKEMFNTAITAIRASGKYK 243


>gi|331672402|ref|ZP_08373193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280]
 gi|331070597|gb|EGI41961.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG++E
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNSE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|293374468|ref|ZP_06620790.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
 gi|325841138|ref|ZP_08167263.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Turicibacter sp. HGF1]
 gi|292646847|gb|EFF64835.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
 gi|325489995|gb|EGC92341.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Turicibacter sp. HGF1]
          Length = 257

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA---EVKANGDWK 57
           M K   + IL L+++     S N   +  I+K G L  G++     F     +       
Sbjct: 1   MKK--MLMILGLMLVGVVGCSQNGVSVESIEKNGSLLVGLSADYPPFESVKMIDGKETLV 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV     +++ +      +++  ++      ALQ+ Q+D++         R+    + 
Sbjct: 59  GFDVMLAEEIANELGVK---VEFKQMDFSGLVGALQASQVDMVISGMSPDEERQK--QVD 113

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F  + Y      ++  +    I S   L G  I  Q G+           A+ +  +   
Sbjct: 114 FSDLYYTGENAVLIRTESVDSIKSEDDLKGIKIGTQLGSVQSPI------AYELTENVKE 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               + I         DA               +      +   + S+  +A A+ +G T
Sbjct: 168 LATTQAIVLELSNGNLDAVIVGKEIANRYAEQFENVEVADL--KVSSEEYMAVAMPKGST 225

Query: 236 EWYNIVSWTH 245
           +    V+   
Sbjct: 226 DLVEKVNEVI 235


>gi|221197101|ref|ZP_03570148.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2M]
 gi|221203773|ref|ZP_03576791.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2]
 gi|221175939|gb|EEE08368.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2]
 gi|221183655|gb|EEE16055.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2M]
          Length = 260

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAASAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  N      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENNFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   A R DA   D        L + R + +  +   +    +        + + D
Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 226 TDLKAKIDRAILDMV 240


>gi|325528847|gb|EGD05895.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. TJI49]
          Length = 266

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 13/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S  A +L  +K+ G LK  +      F    A+G  +GFDVD  +A+++ +   P   Q+
Sbjct: 24  SHAADLLDTVKQAGVLKIALEGTYPPFDYRNADGQLEGFDVDVAKAVAARLGVKP---QF 80

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138
           +          LQ+ + D++      T  R     L F     +     +  +       
Sbjct: 81  VTTEWSGILAGLQAGKFDVIVNQVAITPSR--RQALDFSQPYVYSSAQLLQRQNDARAFR 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+ +L G  + V  G+     +              V+    E      A R DA   D 
Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKRVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +    + N                 +     +G+ ++   +    
Sbjct: 194 -LMLNYLIKNSHLPLRPGSVLADGADEMGIPFRKGNPKFAKALDDAI 239


>gi|241205008|ref|YP_002976104.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240858898|gb|ACS56565.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 257

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 89/261 (34%), Gaps = 23/261 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F  + +  + LF  S   +               G ++    F  V A+G  +GFD+D
Sbjct: 6   RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL + +    ++  ++  +      AL +K+ D++  +   T  R     + F    
Sbjct: 57  ITKALCAEM---KAECTFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y       + K   IS V+ L G  I  Q  TT       +           ++   +E 
Sbjct: 112 YNTPPAIAVPKDSTISDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238
                + R DA   D+  L     ++      ++    + K         AI QGD    
Sbjct: 168 KLDVASGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRQGDP-LR 226

Query: 239 NIVSWTHYAMVTAEELGITQK 259
             ++    A+  + E    Q 
Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247


>gi|320547044|ref|ZP_08041343.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus equinus ATCC
           9812]
 gi|320448329|gb|EFW89073.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, binding protein [Streptococcus equinus ATCC
           9812]
          Length = 291

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 90/280 (32%), Gaps = 19/280 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAE---VKA 52
           M   K F   +L       T+  +N    + + DIK +G +   +N     F     V  
Sbjct: 20  MKLSKVFGGLVLVASTCLLTACGSNDKKDTSVSDIKDKGTMVVALNPEFAPFEFKTLVDG 79

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G DV    A+   +      +++  ++      +LQS + DI       T  R+ 
Sbjct: 80  KDTIVGADVKIAEAIGEELGVK---VKFSSMSFNNVLASLQSGKADIAISGISATPERKK 136

Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                F    Y      ++ K      +  + L G S+  Q GT  E   ++  K     
Sbjct: 137 --AYNFSEPYYESENVVLIKKTDLDKYTKTTSLDGLSVGTQKGTIQETVASEQLK----G 190

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +   +  E+    +  +  A   +          ND  +   I          A A+
Sbjct: 191 AKVVALTQNGEMINELKNGQIQAVVLEKPIAEGYVANNDDLTISNITLKNDDADAYAVAL 250

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
            + D +    V+     +  + ++    ++   +S   +N
Sbjct: 251 PKDDDKLTKKVNKVINDLKDSGKIDQFVQDAYALSTSDSN 290


>gi|319794875|ref|YP_004156515.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315597338|gb|ADU38404.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 266

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 88/247 (35%), Gaps = 10/247 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   ++   + +L     +   + L ++ K   +K  + T    +  V  N   +G DV
Sbjct: 7   KRHLALAFASVALLATAGGAHAQNALDNVLKAKTIKIAVPTDYPPYGSVDKNMKPQGLDV 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    +++ +      I+ +P+ +  R   LQ+++ D++         RE    + F   
Sbjct: 67  EMAELIATKLGVK---IELVPVTSANRIPYLQTRKADLVISTLGKNPEREKV--IEFSSA 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                Q     K   +++ S ++G ++ V  G   +  L     A+        FE    
Sbjct: 122 YAPFFQAVYAAKSMKLTAFSDMAGKTVAVTRGAMEDQELNKVAPAN---VDYRRFEDNNA 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA+ A +        SA  A  +    P        ++  SP    + +G+T     V
Sbjct: 179 TIAAFVAGQTQTLAT--SAAVAGDMLAKNPKVSAEFKLLLKDSPCFVGVAKGETALKTKV 236

Query: 242 SWTHYAM 248
           +    A 
Sbjct: 237 NEIIAAA 243


>gi|281491029|ref|YP_003353009.1| glutamate or arginine ABC transporter substrate binding protein
           [Lactococcus lactis subsp. lactis KF147]
 gi|281374787|gb|ADA64307.1| Glutamate or arginine ABC transporter, substrate binding protein
           [Lactococcus lactis subsp. lactis KF147]
          Length = 269

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 25/272 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
           M K     +    +    +     +  + +  +KK G LK  ++     F          
Sbjct: 1   MKKLALGMVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKN 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G DVD   A+   +      ++   ++      +L + + DI          RE   
Sbjct: 61  TIVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            + F  + Y      ++ K       SV    G  +  Q G+T E  +   FK       
Sbjct: 116 SVNFSDVYYTASNYLVVKKSDLSKYRSVDDFKGKKVAAQKGSTQEGIVTSQFK----GAT 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAI 230
            I   ++ +     +  +      +     +    N        +     K       A+
Sbjct: 172 EIALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVDVKTPKDSYGSAVAL 230

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
            +G  E   +V+         EEL   Q N +
Sbjct: 231 PKGSDELTKVVNSVIK-----EELKNGQINKD 257


>gi|229189060|ref|ZP_04316088.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC
           10876]
 gi|228594480|gb|EEK52271.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC
           10876]
          Length = 265

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|330807010|ref|YP_004351472.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375118|gb|AEA66468.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 251

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 82/250 (32%), Gaps = 20/250 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    ++   ++ + +            LK GI      F    A+G   GFD 
Sbjct: 4   YKKFLLAAAASLVFSASAMAAD-----------KLKMGIEAAYPPFNNKDASGQVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +    + +  +      AL +++ D L  +      R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CEVVTSDWDGIIPALLAQKFDFLISSLSVNDERK--QAVDFTDP 107

Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K          L G  I  Q  T     L D            +++  E
Sbjct: 108 YYSNKLQFIAPKNVDFKVDKESLKGKVIGAQRSTLAGTWLED---ELGSDITAKLYDTQE 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R DA   D    Y    T    +       ++    +A A+ +G+ E  N 
Sbjct: 165 NAYLDLTSGRVDAILADKYVNYDWLKTEAGRAYEFKGDPVVEGDKIAIAVRKGNDELRNK 224

Query: 241 VSWTHYAMVT 250
           ++     ++ 
Sbjct: 225 LNAALKEIIA 234


>gi|322832079|ref|YP_004212106.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rahnella sp. Y9602]
 gi|321167280|gb|ADW72979.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rahnella sp. Y9602]
          Length = 247

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 82/234 (35%), Gaps = 20/234 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFD+D
Sbjct: 2   KSLLKVSLAALTLAFAVSSHAAD--------KKLIVATDTAFVPFEFKQGD-KYVGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +       +  P++      ALQ+  ID+       T  R+    + F    
Sbjct: 53  LWDAVAKEM---KVSYELKPMDFGGIIPALQTHNIDLALAGITITPERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV+ L G ++ V++GT++     DY KA+        F  ++ 
Sbjct: 108 YNSGLMVMVKSNNDAIKSVADLKGKTVAVKSGTSSV----DYMKANVQTKDLRQFPNIDS 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                   R DA   D   +     T  +  +   + D ++      A  QG  
Sbjct: 164 AYMELGTGRADAVMHDTPNILYFIKTAGKG-QFKAVGDSLAGQQYGIAFPQGSD 216


>gi|295697368|ref|YP_003590606.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
 gi|295412970|gb|ADG07462.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
          Length = 275

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 8/212 (3%)

Query: 35  FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
               G +     F  V       +GFD+D   A++ A      ++++     K  F AL 
Sbjct: 47  VYVVGTDAAYAPFESVNPQTNQIEGFDIDLLNAVAKAAG---FQVKFENTPWKGIFQALS 103

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
             Q DIL      T  R+    + F    +   Q  ++     I ++  L G  + VQ G
Sbjct: 104 IGQRDILISAITITDERK--QSMDFSNPYFQAQQMIVVPPGSPIRTLQDLKGKKVGVQTG 161

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +  + D+        +   ++         +    DA   D   +      N     
Sbjct: 162 TTGDEIVTDFLGK--TDPNIKRYDTTPLALEDLKNKGVDAVVADNGVVLDYIRQNSSKGF 219

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    K     A+ +G+T     ++   
Sbjct: 220 EHYTDPKFPKEYYGIAVKKGNTALLEKINDGL 251


>gi|206576073|ref|YP_002239486.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Klebsiella pneumoniae 342]
 gi|206565131|gb|ACI06907.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Klebsiella pneumoniae 342]
          Length = 243

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  ++                ++         F  V AN    GFD
Sbjct: 1   MKKVLIAALLAGMSLSASAAQ-------------TIRFATEASYPPFELVDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +           L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFTNQAFDSLIPGLKFRRFDAVMAGMDITPEREK--QVLFST 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +S+ QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KFTSIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD + +         P    +   +  K+     L  A+ QG+T+
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWL--KSNPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LQQKFNAAL 224


>gi|319795334|ref|YP_004156974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315597797|gb|ADU38863.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 275

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 90/237 (37%), Gaps = 11/237 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77
               +A  L DIKK+G L  G+         V        G++VD   A++  I   P  
Sbjct: 18  GTVAHADQLADIKKKGELVVGVLGTDEPATFVDPKTRQIVGYEVDLVNAIAKKIGVKP-- 75

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
                +    R   LQ   +D+++        RE    + F   T+  GQ  I+ K  GI
Sbjct: 76  -VLKQIAVAARIPELQQGHVDLVAAGLTHNKEREA--QIDFSLTTFVTGQKAIVKKDSGI 132

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + + QL G  +    G T E  +    +        + F+  ++   A +  +   Y  D
Sbjct: 133 ADIPQLGGKKVLTIRGGTQEPNI----RKAVPTAEVVTFDTSQQAFQALQQGKGVGYVDD 188

Query: 198 ISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            +AL           +++V+L   +S   LA  I +G++    +V  T   +  + E
Sbjct: 189 EAALLRSYAKLGPAKAQYVVLKQNLSTEALAIGIKKGESGLKAVVDDTLRELEKSGE 245


>gi|306844082|ref|ZP_07476676.1| extracellular solute-binding protein [Brucella sp. BO1]
 gi|306275525|gb|EFM57257.1| extracellular solute-binding protein [Brucella sp. BO1]
          Length = 262

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 29  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 86  GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 200 CKMVGTYPPDDAIHGVGIGVAFKKGRPELVEKFNAAIKAI 239


>gi|218234702|ref|YP_002365641.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus B4264]
 gi|218162659|gb|ACK62651.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus B4264]
          Length = 265

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G    G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGEFVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D +T +        L   + ++  I+      S       
Sbjct: 170 EIIGVEGFSQAAELLASGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|138897014|ref|YP_001127467.1| glutamine transport system substrate-binding protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268527|gb|ABO68722.1| Glutamine transport system substrate-binding protein [Geobacillus
           thermodenitrificans NG80-2]
          Length = 273

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 77/254 (30%), Gaps = 15/254 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI---KKRG-FLKCGINTGLVGFAEVKANGDWK 57
            K F V+++  + +   +   +          K+    +  G +     F  +   G   
Sbjct: 5   KKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYM-EKGKVV 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD D   A+      D        +     F +LQSK+ID+       T  R+      
Sbjct: 64  GFDADLLDAVMKEAGLDYE---LKNIGWDPLFASLQSKEIDMGISGITITDKRK--QSYD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +   Q  ++ +   + +   L G +I VQ  TT +      F       H   FE
Sbjct: 119 FSAPYFEATQVILVKEGSLVKNALDLKGKTIGVQNATTGQEAAEKLF---GKGEHIKKFE 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTE 236
                         DA   D +        N      VI  PD  +         + D++
Sbjct: 176 TSVVAIMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPK-DSD 234

Query: 237 WYNIVSWTHYAMVT 250
               V      ++ 
Sbjct: 235 LKAKVDEALKNIIE 248


>gi|299536404|ref|ZP_07049716.1| histidine-binding protein precursor (Hbp) [Lysinibacillus
           fusiformis ZC1]
 gi|298727888|gb|EFI68451.1| histidine-binding protein precursor (Hbp) [Lysinibacillus
           fusiformis ZC1]
          Length = 258

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 80/249 (32%), Gaps = 10/249 (4%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWK 57
           M ++    ++I+    L      +  +          + K G          +   G+  
Sbjct: 1   MKRNLMVLLTIMAAFTLVLAGCGSKDNTSSGDGDSKKVYKVGTEATFAPIVSLDDKGNIV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD  +A++  +     ++++  +  +  F  +++ + DI       T  R+ +    
Sbjct: 61  GIDVDVLQAIADEM---DFEVKWESIGWEPVFQTIKNGETDIGGAGITITDERKET--FD 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y      ++ +   I S+ +L    I VQ   T  +             +   FE
Sbjct: 116 FTEPYYESQLLIVVKEDSKIQSLDELKDKKISVQINATGHMAAKKLQGE--SSPNIFAFE 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                         +A  GD S +Y     +      VI  D   K      + +G+ E 
Sbjct: 174 NQPIAIQEMLNGNVEAAIGDNSVVYEYIKAHPNDKIKVIKDDSFEKEYYGFMVQKGNKEL 233

Query: 238 YNIVSWTHY 246
            + ++    
Sbjct: 234 LDKLNEGLK 242


>gi|325684593|gb|EGD26752.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 279

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 78/236 (33%), Gaps = 16/236 (6%)

Query: 18  TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
           ++ +  +     +   +K    +  G+      F          +GF++D  R L+  I 
Sbjct: 24  SACAVESDNSVRVYNHVKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEIL 83

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K +++ + ++ +   L++  +D +      T  R+    + F    +  G   +  
Sbjct: 84  GKDGKAKFIEVTSQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141

Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
               I S+  L+  G    V  GTT    +A              +        A  A +
Sbjct: 142 TSSPIKSIKDLNHKGRVAIVVKGTTAADDIARLAPKAK----IRQYNDYGACTNALLAGQ 197

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            DA   D   L  +   +       ++   ++  P   A+ +G T+    ++    
Sbjct: 198 GDAVATDNGILAGIAEQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250


>gi|296119013|ref|ZP_06837586.1| amino acid ABC transporter, amino acid-binding protein
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295968111|gb|EFG81363.1| amino acid ABC transporter, amino acid-binding protein
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 356

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 10/210 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +I +RG L  G++      +   A  G+ +GF+VD    ++  IF D +++ +  L + E
Sbjct: 102 NIIERGRLIVGVDQSHNLLSYRDAATGELRGFEVDLAHEIAEDIFGDRNRVDFRFLESAE 161

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL +  +DI+ R    T  RE  +   F           ++    GI+SV Q SG +
Sbjct: 162 RTRALANGTVDIVIRTMTITPDREKEIA--FSQPYMITDTRMLVLTSSGITSVEQTSGRT 219

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C   G+T    + D+        + ++ +   +   + +  + +A   D + L  +   
Sbjct: 220 LCAVDGSTALDKIPDFAP----NSNLLITKSWGDCLMSLQLGQANAVVVDDALLSGMMAQ 275

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +   S   I+ + +        + + D  +
Sbjct: 276 DPYSS---IVGETLDTEVYGIGVRKPDAHY 302


>gi|289671688|ref|ZP_06492578.1| glutamine ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330982576|gb|EGH80679.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 277

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 89/238 (37%), Gaps = 13/238 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78
            + +A  L D+  +  L CG+   +  F+       +  G DVD C+AL+  +  +   +
Sbjct: 18  SAVHADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMGVE---L 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +  PL+ + R   ++  ++D++  N  +T  R   +   F    Y   +  ++       
Sbjct: 75  ELKPLSVEARIPEVKMGRVDVIFANLAYTKSRAEQIQ--FSDPYYIAKETLVVRAANADQ 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             S   G  I    G+T+E ++            P+ F+       A + ++      + 
Sbjct: 133 PKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNT 186

Query: 199 SALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                L         E  I  + ++  P+   + QG+  +   V+ +   M  A E+ 
Sbjct: 187 MTAIKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGEID 244


>gi|225570416|ref|ZP_03779441.1| hypothetical protein CLOHYLEM_06516 [Clostridium hylemonae DSM
           15053]
 gi|225160787|gb|EEG73406.1| hypothetical protein CLOHYLEM_06516 [Clostridium hylemonae DSM
           15053]
          Length = 289

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 15/226 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G    G +     +     NG++ GFD+D  + +         K    P++   + + 
Sbjct: 44  DDGTFVVGFDAAFPPYGYKDDNGEYVGFDLDLAQEVCDRNGWKLKK---QPIDWDSKDME 100

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S  ID +          +      +      + Q  ++ +   I     L+G  + VQ
Sbjct: 101 LSSGTIDCIWNGFTMNGREDK---YTWSDPYVDNSQVIVVPEDSDIKEFKDLAGKMVEVQ 157

Query: 152 AGTTTELTLADYFKAHNMKYHPI-------VFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           A ++   TL    K    +                        +  C+A   D     A 
Sbjct: 158 ADSSALHTLESDDKEEGGQAELAATFGALNQVADYNTAFMDLESGACEAIAMD--VGVAN 215

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              + R     +L + +S         +G+ E  + V  T   M  
Sbjct: 216 YQIDSRGGGFRLLDEKLSTEQYGIGFKKGNEELRDTVQKTLNEMAE 261


>gi|123441810|ref|YP_001005794.1| arginine-binding periplasmic protein 2 precursor [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088771|emb|CAL11577.1| arginine-binding periplasmic protein 2 precursor [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 249

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 84/250 (33%), Gaps = 19/250 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL  ++   T+  T  S          ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATILSGMVFSATAAETTHSTE-------TIRFAASATYPPFESIGANNEIVGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 54  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FSQ 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS + L G  I ++ GTT +  L D           + ++  +
Sbjct: 109 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +T   
Sbjct: 164 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLAAVGEHVTDPQYFGTGLGIAVRPDNTALL 223

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 224 EKLNKAIDAV 233


>gi|295700121|ref|YP_003608014.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295439334|gb|ADG18503.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 262

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 90/253 (35%), Gaps = 17/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   +S++    L  +  +  A      + +  L+ GI      F     +G  +GFD
Sbjct: 1   MFRKLQLSLIVAAALVGSLGTVGA------QAQDTLRFGIEAAYPPFESKSPSGQLQGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ S +        ++         AL++++ D+++   + T  R+ S+    +P
Sbjct: 55  VDVGNAVCSKLGVK---CVWVENAFDGLIPALEARKFDVINSAMNITDKRKQSIEFT-KP 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I               +  V  L G  + V  G++ E  L  ++         + ++  +
Sbjct: 111 IYIVPIVMVARRGSGLLPDVKSLQGKRVGVLQGSSQEDFLKAHWANAG--VTVVSYQDQD 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235
           ++ A     R DA   +        L      E+ I+   +S            + +GD 
Sbjct: 169 QVYADLVGGRLDAAVQEAQTAQDGFLGKPAGHEYAIVGKPLSDPATLGEGTGWGLRKGDK 228

Query: 236 EWYNIVSWTHYAM 248
                V+    A+
Sbjct: 229 ALVAKVNAALDAL 241


>gi|256059130|ref|ZP_05449339.1| hypothetical protein Bneo5_02065 [Brucella neotomae 5K33]
 gi|261323081|ref|ZP_05962278.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella neotomae 5K33]
 gi|261299061|gb|EEY02558.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella neotomae 5K33]
          Length = 257

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIPAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|229159506|ref|ZP_04287522.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           R309803]
 gi|228623963|gb|EEK80773.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           R309803]
          Length = 264

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 79/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKDSATTSSSGEKEFRYAMSGLYKPFNYKENDGKLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +   P  I       +     LQ+K+ D++  +   T  R     + F
Sbjct: 61  FDVEIGAALAKKMNMKPVPIT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L    I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKDKKIGVVKASTFKDLVA------KYTDKITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|213852498|ref|ZP_03382030.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
          Length = 217

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 25/240 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N +  P    +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217


>gi|209516645|ref|ZP_03265498.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209502920|gb|EEA02923.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 259

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 72/249 (28%), Gaps = 14/249 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      +  ++    +   NA  L  IK  G  + G       F      G   GFDV+
Sbjct: 2   KPIRSLAMIALLQAVLAHPANADDLAQIKASGVFRIGTEGTYAPFTYHDDAGKLTGFDVE 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +   P   Q++  N +     L   + D +      T  R+  L   +    
Sbjct: 62  LASAIAQRLGVKP---QFIEGNWEGLIGGLDVNRYDAVVNEVAITDERK--LKYDYSDPY 116

Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                  I+      I S   L G         T    L     AH      I  +   E
Sbjct: 117 ITSHAVLIVASDNTTIRSFDDLKGRKSA----NTLSSNLGRIAAAHG--ALVIPAQGFNE 170

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYN 239
                 A R DA   D  +    K         V+  D    S    A  I +G+ +   
Sbjct: 171 SIELLVAGRVDATVNDSLSFLDYKKREPDAKIKVVAVDTSPDSSDKSAVLIRKGNPKLRV 230

Query: 240 IVSWTHYAM 248
            ++     M
Sbjct: 231 AINDALVGM 239


>gi|297619590|ref|YP_003707695.1| extracellular solute-binding protein family 3 [Methanococcus voltae
           A3]
 gi|297378567|gb|ADI36722.1| extracellular solute-binding protein family 3 [Methanococcus voltae
           A3]
          Length = 261

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 83/231 (35%), Gaps = 10/231 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
            F   + N +   ++++   L  G +     F  +  NG   GFD+D    +   +    
Sbjct: 20  SFAGCTDNGNANSNVEEPYVLTVGSSVDFRPFEYMDENGKPTGFDMDIIHEIGRRL---D 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKK 134
            +I+ +         AL +K+ D +      T  R   +   F    +  GQ   +    
Sbjct: 77  MEIEIIDSQFGGLIPALNTKKFDCVISAMTITENRSKEVK--FSEPYFEAGQILSVNKDN 134

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+++  LS   + VQ  TT +L  ++   A    Y    + ++ +     +  + DA 
Sbjct: 135 NEITTLEDLSDKKVGVQIATTGDLIASEN--ASKYNYEVKQYNKIGDAFMDMKNGKIDAV 192

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D   + A +   + P  + +  D+++      A    DTE    +    
Sbjct: 193 LVDN--VVATEYFQENPGLYKLTGDLMTSESYGIATRLDDTELSEKIDKAL 241


>gi|330957238|gb|EGH57498.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 254

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 81/256 (31%), Gaps = 27/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MYK   +     +    ++F+              ++ GI      F    A+G   GFD
Sbjct: 3   MYKKILLIAAATLAFSSSAFAE------------KMRMGIEGAYPPFNNKDASGQVVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   AL + +  +    + +  +      AL +++ D L  +   T  R     + F  
Sbjct: 51  REIGDALCAKMKVE---CEVVTSDWDGIIPALNAEKFDFLISSLSITDER--KQVVDFTD 105

Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             Y +   F+  K   +       +   L+G S+  Q  T     L D  +         
Sbjct: 106 PYYSNKLQFLAPKTSSVDVSSIEKAKESLAGKSVGAQRSTLAASWLEDKLE----IMDAK 161

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  E       + R D    D    Y    +    +       ++    +  A+ +G 
Sbjct: 162 LYDTQENAFLDLLSGRVDVMLADKYVSYEWLKSEAGQNFEFKGEPVVQNDKIGIAVRKGS 221

Query: 235 TEWYNIVSWTHYAMVT 250
            E    ++     ++ 
Sbjct: 222 DELRERLNVALKEIIA 237


>gi|300784269|ref|YP_003764560.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299793783|gb|ADJ44158.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 308

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 79/227 (34%), Gaps = 8/227 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80
             + +   +K  G L  G      G        G + GFD++  + +S+ +  DP KI +
Sbjct: 57  AGSPVFAKMKSAGALTVGAKDDQPGLGMKDPTTGKFGGFDIEIAKLVSAGLGFDPEKITF 116

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
             +++  R   + +  ++        T  R+    ++F    +  GQ  ++ K    I+ 
Sbjct: 117 RTVDSGAREQTIANGDVNYYVGTYSITDKRKAL--VSFAGPYFLAGQDLLVRKDDSSITG 174

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G  +C   G+T    +           + + F++  +     ++   DA T D +
Sbjct: 175 KDTLKGKKVCSVTGSTPIQKIRSEN--LTEPGNIVEFQKYSQCVEKLQSKDVDAVTTDDA 232

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            L         P    ++    S       + + D    + V+    
Sbjct: 233 ILKGYAAQ--EPDSLKVVGQTFSTEKYGIGLNKDDKVLRDKVNDILQ 277


>gi|171059885|ref|YP_001792234.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6]
 gi|170777330|gb|ACB35469.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii
           SP-6]
          Length = 263

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 12/257 (4%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +       +L L  L         + L  +  R  +   + T    +  V  +   +G
Sbjct: 1   MQRRPLVMSVVLGLSALLSPLAVQAQAALDTVMSRKLINIAVPTDFPPYGFVGIDLKPQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DVD    +++ +      I+ +P+ +  R   LQ+K+ D++         RE    + F
Sbjct: 61  LDVDMANLIAAKLGVK---IELIPVTSANRIPYLQTKKADLVISTLGKNAEREKV--IDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   Q     K   I S + L+G ++ V  G   ++ L     A         FE 
Sbjct: 116 TAAYSPFFQAVFAAKGVAIKSPADLAGKTVAVTRGAIEDMELTKLAPA---GADIKRFED 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                +A+ + +  A     S   A  +    P        ++  SP    + +G+ +  
Sbjct: 173 NNATVSAFVSGQVQAIATGAS--VAGNMMQRSPQLGAEYKFLLKDSPNFIGVGKGEDKLR 230

Query: 239 NIVSWTHYAMVTAEELG 255
             V+    A   A EL 
Sbjct: 231 LKVNEIIAAAKAAGELD 247


>gi|319781052|ref|YP_004140528.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317166940|gb|ADV10478.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 257

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 84/255 (32%), Gaps = 18/255 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   ++   L  L  T+    A+ L  IK+ G +K G       F     +G   G
Sbjct: 1   MKWLKSLIIAG-TLQALAVTAGHAGAN-LDQIKQAGVIKVGTEGTYAPFTYHDTSGALVG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+  +A++  +      +++L          L + + D +      T  R+      F
Sbjct: 59  FDVEIAKAIADKLGVK---VEFLEGKWDGLIAGLDANRYDAVINEVGITDARKA--KYDF 113

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I+      I + + L G     Q+ T+    LA+   A       +  +
Sbjct: 114 SDPYIASKAVLIVRGDNTDIKTFADLKGKKSA-QSLTSNFGKLAETNGA-----ELVGTD 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             ++        R DA   D  +    K      +  +   +  +       + +GD E 
Sbjct: 168 GFDQSIQLLLTGRADATINDSLSFLDFKKHKPDANVKIAAQE-ENADYSGVIVRKGDPEL 226

Query: 238 YNIVSWTHYAMVTAE 252
              ++    A + A+
Sbjct: 227 VAAINKAL-ADIKAD 240


>gi|298290460|ref|YP_003692399.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296926971|gb|ADH87780.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 267

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 10/231 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
                +A  L  I+    ++  +      F  V A+   KG+DVD  + ++  +      
Sbjct: 25  APLPAHADALATIEANKVIRIAVPQDFPPFGTVGADMQPKGYDVDMAKLIADKMGVK--- 81

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ +  R   LQ+ ++D++  +      RE    + F         G     +   
Sbjct: 82  LELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKV--IDFSAAYAPFFNGVFGPAEVAA 139

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                LSG ++ V  G   +L L     A         +E      +A+ + + D     
Sbjct: 140 KDAKDLSGKTVGVTRGAVEDLELTKIAPA---DVTIKRYEDNNGTISAFLSGQVDLIATG 196

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                A+      P +   +  +I  SP    + + +      V+    A 
Sbjct: 197 NVVAAAILER--NPPKKPEIKFLIKNSPCFIGLNKNEPALLAKVNDIIAAA 245


>gi|157146480|ref|YP_001453799.1| hypothetical protein CKO_02240 [Citrobacter koseri ATCC BAA-895]
 gi|157083685|gb|ABV13363.1| hypothetical protein CKO_02240 [Citrobacter koseri ATCC BAA-895]
          Length = 245

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + A+    GFD
Sbjct: 3   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDASNKIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 50  VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  +    +S+ QL G  + VQ GTT +  + D           + ++  +
Sbjct: 105 PYYDNSALFIGQQG-KYTSIDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 160 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAPVGDKVTDKDYFGTGLGIAVRQGNTE 217

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 218 LQQKFNTAL 226


>gi|153009565|ref|YP_001370780.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561453|gb|ABS14951.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 268

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 69/220 (31%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G       F  +K +G   GFDVD  +AL   +    ++ +++         ALQ+
Sbjct: 35  KLKIGTEGAYPPFNFIKPDGTLSGFDVDIAKALCEEM---KAQCEFVTQEWDGAIPALQA 91

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 92  GKFDAFIASMSITDERKK--QVDFSNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQV 149

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     + D   
Sbjct: 150 STTHSNYSEKTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGAC 205

Query: 213 EHVILPDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248
             ++           P    A  +G  E     +    A+
Sbjct: 206 CKMVGTFPPVIEIHGPGAGVAFKKGRPELVEKFNAAIKAI 245


>gi|187919667|ref|YP_001888698.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187718105|gb|ACD19328.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 274

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 11/239 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++   L  L     + +A  L +I K G ++ G+      F  +  +    G+D+D    
Sbjct: 22  LAFTALGALCALPSAAHADALDNIAKSGTVRIGVFEDYPPFGSIGPDMKPMGYDIDVANL 81

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +  A+    +K++ + +    R   L   + D+L      T  RE    + F        
Sbjct: 82  IGKAL---NAKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSQPYAPYY 135

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K   + + + L+G SI V  GT  +L++           +   F+      +A+
Sbjct: 136 LAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAF 192

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + +             +      P+        +  SP    + + +      V  T 
Sbjct: 193 LSGQVQLMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVDETI 249


>gi|171320700|ref|ZP_02909714.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171094060|gb|EDT39156.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 317

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 86/244 (35%), Gaps = 11/244 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCR 65
              +  ++  F+  +   S L  I +R  +  G+      F  +        GF+VD   
Sbjct: 50  ALFVAALLSAFSGVARADSTLDRIHQRHKITIGVILSGPPFGSLDPATQKPVGFNVDLAN 109

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +  D   ++  P+    R   LQ  ++D L  N + T  R   L  A  P     
Sbjct: 110 DVAKRLGVD---VELTPVQPSNRVQFLQQGKVDALIANMELTKERAEILSYAPTPF-ESI 165

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   I  K  GI S + L G  +CV  G+     LA  + A         F    E   A
Sbjct: 166 GGALIARKDSGIKSWADLRGKPVCVSQGSNYTKPLATEYGA-----QVKAFRGQPESLLA 220

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            R + C A       L  L   N    ++   LP  +  SP    + +G+T+  N +   
Sbjct: 221 LRGNNCVAAVHVAPTLRMLVARNPDWKDYTTLLPTDLIPSPAVIWVRKGETDTQNALDRI 280

Query: 245 HYAM 248
               
Sbjct: 281 VQDW 284


>gi|238762600|ref|ZP_04623570.1| Extracellular solute-binding protein family 3 [Yersinia
           kristensenii ATCC 33638]
 gi|238699245|gb|EEP91992.1| Extracellular solute-binding protein family 3 [Yersinia
           kristensenii ATCC 33638]
          Length = 252

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 84/244 (34%), Gaps = 18/244 (7%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L+     S    A  +  I        G++ G   F  +  +G+  GFD+D   AL  
Sbjct: 1   MALLTGLILSAPVAAQTIETI------SFGVDGGYPPFDVLAPSGEITGFDIDIANALCD 54

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    +K  ++    +    AL +++ D +  +   T  R+    + F    Y      
Sbjct: 55  NL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTDRYYRSAAQL 109

Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +  K    +  V+ L G ++ VQ G+  E     ++         + +   + +     +
Sbjct: 110 VARKGSPLLPDVASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQDNVYLDLLS 167

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWT 244
            R +A   D     +  +   R  +      +I    +      A+ + +    + ++  
Sbjct: 168 GRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNPALRDALNGA 227

Query: 245 HYAM 248
             A+
Sbjct: 228 IKAI 231


>gi|325499701|gb|EGC97560.1| arginine-binding periplasmic protein 2 precursor [Escherichia
           fergusonii ECD227]
          Length = 271

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V +L    L F + + N            L  G +     +  V A+    GFD
Sbjct: 26  MKQKLLVMLLA--GLSFQATAANTKT---------LHFGTSATYAPYEFVDADNQIVGFD 74

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+   +    ++ Q+   +       L+ K+ D +    D T  RE    ++F  
Sbjct: 75  IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKRE--QQVSFSQ 129

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K   +S ++L G  I ++ GTT +  L D  K        + ++   
Sbjct: 130 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQDKQKE----ITAVAYDSYL 185

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPL----APAIIQGDT 235
                 +++R D   GD   + A+        ++ I+ +              A+ +G+ 
Sbjct: 186 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDERAKDPEYYGKGLGIAVRKGND 242

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 243 ALLAEINAALDKVKASPEYA 262


>gi|313123229|ref|YP_004033488.1| ABC amino acid transport/signal transduction system, periplasmic
           component/domain [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279792|gb|ADQ60511.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 279

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 78/235 (33%), Gaps = 16/235 (6%)

Query: 18  TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
           ++ +  +     +   +K    +  G+      F          +GF++D  R L+  I 
Sbjct: 24  SACAVESDNSVRVYNHVKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEIL 83

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K +++ + ++ +   L++  +D +      T  R+    + F    +  G   +  
Sbjct: 84  GKDGKAKFIEVTSQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141

Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
               I S+  L+  G    V  GTT    +A              +        A  A +
Sbjct: 142 TSSPIKSIKDLNHKGRVAIVVKGTTAADDIARLAPKAK----IRQYNDYGACTNALLAGQ 197

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA   D   L  +   +       ++   ++  P   A+ +G T+    ++   
Sbjct: 198 GDAVATDNGILAGIAEQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKAL 249


>gi|223985125|ref|ZP_03635221.1| hypothetical protein HOLDEFILI_02527 [Holdemania filiformis DSM
           12042]
 gi|223962947|gb|EEF67363.1| hypothetical protein HOLDEFILI_02527 [Holdemania filiformis DSM
           12042]
          Length = 269

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 85/266 (31%), Gaps = 23/266 (8%)

Query: 1   MY-KDFFV---SILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50
           M  K   +    I   ++   +   +          L  I++RG L+ G        +  
Sbjct: 1   MKYKSLRLRAGLIAAAVVFILSGCQSGGQTKGEGDLLSQIQQRGVLRIGTEGTYSPNSYH 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G+  GFDV+  R ++  +        ++       F  + S ++D +          
Sbjct: 61  DESGELVGFDVEVARGVAEQLGVKAE---FVEAEWDSLFAGMDSGRVDTVINE--VEYSE 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           E +    F     +     ++      I+    L G     Q  T++   +A+ + A   
Sbjct: 116 ERAEKYDFSDPYTYVHGALLVAADNPEIAGFDDLKGKRSA-QNMTSSWGRMAESYGA--- 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +  + + +      + R DA     +A Y     +      ++     + S L   
Sbjct: 172 --EVVSVDTLTQCVELLTSGRVDATLNAETAFYDYLKQHPEAPVTIVAMTESTTSSL-IP 228

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + + + E    ++     M  + EL 
Sbjct: 229 VKKNNPELVEAINNALQTMRDSGELA 254


>gi|306831271|ref|ZP_07464431.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426507|gb|EFM29619.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 280

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 74/258 (28%), Gaps = 17/258 (6%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51
           M  K   V  L L+     +  +++               K G +  G +   V      
Sbjct: 1   MKFKKVLVGALALVSTLTLAACSSSSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFD+D   A+          +++  +N   +   L +  ID++      T  R 
Sbjct: 61  EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDERA 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168
               + F      + Q  +  K  GI+S + +    +  Q+G++         +  K   
Sbjct: 118 E--KVLFTNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIV 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  +E   +     +  R D    D                + I+         A 
Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235

Query: 229 AIIQGDTEWYNIVSWTHY 246
              + D      ++    
Sbjct: 236 GARKADKTLVKKINQAFK 253


>gi|256848428|ref|ZP_05553870.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256714695|gb|EEU29674.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 265

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 24/256 (9%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K          S+L ++ L     S++++    +KK G L  G+      ++    NG
Sbjct: 1   MKKWLKRISVIGASLLAMVALAACGRSSSSNSPQLVKK-GTLTVGLEGTYAPYSYR-ENG 58

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  RAL+  +      ++++P         + S + D+   N   T  R+   
Sbjct: 59  KLTGFEVDMARALAKKMGYK---VKFVPTKWDSLIAGVGSHKFDMAINNIAMTPERQK-- 113

Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +     IM K    I +V+ + G  I    GT     +  +   +      
Sbjct: 114 AYLFSTPYIYSKTSLIMKKDNNDIKNVNDIKGKKIAAATGTANADNVKKFGGDN------ 167

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAI 230
           +         +  R  R  A      A        +   +   +    SK P   +   +
Sbjct: 168 VSSPDFATAMSLIRQGRVQAAMNSKEAFL-YYQRTNNADDLKEMTVPTSKIPSQKIGILM 226

Query: 231 IQGDTEWYNIVSWTHY 246
            + +            
Sbjct: 227 AKNNKGLKKKTDKALN 242


>gi|308277190|gb|ADO27089.1| ABC-type amino acid transport [Corynebacterium pseudotuberculosis
           I19]
          Length = 322

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 10/216 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76
           T    +   +  I++RG L  GI+      +    A G+ +GF+VD  R +S  IF DP+
Sbjct: 62  TGSDADPENIRKIRERGRLMVGIDQSQNLLSFRNTATGELQGFEVDLAREISRDIFGDPT 121

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           KI +  ++A     AL++  +D+  R+   T  R     + F    +      ++HK  G
Sbjct: 122 KIDFRYIDADTWVKALENNDVDLAIRSISIT--RGRQDQVFFSTPYFSGKTKLLVHKNSG 179

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           ISSV  L G ++C  A +T                  ++     +   A +    DA   
Sbjct: 180 ISSVDDLPGKTVCATAESTGAQRTRYVAPRAK----LLIVSSSADCLLALQQGHTDAVIS 235

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           D + L  +   +       I+ + +++     A  +
Sbjct: 236 DDTILSGMLAQDP---FTEIVGNALAEEHYGIAFAK 268


>gi|300859245|ref|YP_003784228.1| hypothetical protein cpfrc_01828 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686699|gb|ADK29621.1| hypothetical protein cpfrc_01828 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206936|gb|ADL11278.1| Bacterial extracellular solute-binding protein, family 3
           [Corynebacterium pseudotuberculosis C231]
          Length = 323

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 10/216 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76
           T    +   +  I++RG L  GI+      +    A G+ +GF+VD  R +S  IF DP+
Sbjct: 63  TGSDADPENIRKIRERGRLMVGIDQSQNLLSFRNTATGELQGFEVDLAREISRDIFGDPT 122

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           KI +  ++A     AL++  +D+  R+   T  R     + F    +      ++HK  G
Sbjct: 123 KIDFRYIDADTWVKALENNDVDLAIRSISIT--RGRQDQVFFSTPYFSGKTKLLVHKNSG 180

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           ISSV  L G ++C  A +T                  ++     +   A +    DA   
Sbjct: 181 ISSVDDLPGKTVCATAESTGAQRTRYVAPRAK----LLIVSSSADCLLALQQGHTDAVIS 236

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           D + L  +   +       I+ + +++     A  +
Sbjct: 237 DDTILSGMLAQDP---FTEIVGNALAEEHYGIAFAK 269


>gi|225378340|ref|ZP_03755561.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM
           16841]
 gi|225209777|gb|EEG92131.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM
           16841]
          Length = 299

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 101/310 (32%), Gaps = 42/310 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---------------------------ILGDIKKR 33
           M K   +    L +      +                                L +IK+ 
Sbjct: 1   MKKWNRILAAVLTLSLTAGLTACGGSTSDATANNASAADEGTVSNGSSEVYRTLDEIKES 60

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  G+ +    F  V  NG+++G+D+ F   L   +  D   + ++   A  R   LQ
Sbjct: 61  GTINIGVFSDKNPFGYVDENGEYQGYDIYFANRLGEDLGVD---VNFVSTEAANRIEYLQ 117

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152
           + ++DI+  N   T  R     + F         G +    K I ++        + V +
Sbjct: 118 TGKVDIILANFTVTDERAE--EVDFALPYMNVALGVVSPDSKVIENLDDWDSNDQMIVIS 175

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT E  + D    +        ++       A       A+  D + + A         
Sbjct: 176 GTTAETYMID----NYPDIPLQKYDSYATAKNALENGSGAAWVNDNTEVIAYA--LQNTG 229

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
             V +P + S   +APA+ +G+T   + ++     +    E      +      DT   D
Sbjct: 230 YTVGIPSLGSNDTIAPAVSKGNTTLLDWINDEIKTL---GEEQFFHADYEATLVDTYGSD 286

Query: 273 VQRFLGIDKS 282
            +  L ++  
Sbjct: 287 YEESLVVEGG 296


>gi|308185549|ref|YP_003929680.1| ABC transport system, periplasmic solute-binding protein precursor
           [Pantoea vagans C9-1]
 gi|308056059|gb|ADO08231.1| Putative ABC transport system, periplasmic solute-binding protein
           precursor [Pantoea vagans C9-1]
          Length = 270

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 82/247 (33%), Gaps = 11/247 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               + L L  L F + + + S    + + G L+         +    A+G + GFDV+F
Sbjct: 9   TLLGTALALCSLSFCTLAASDSNPYGLIEPGQLRVASVGDSKPYTFTDASGQFTGFDVEF 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            R ++  I  D   + ++  +      A+ + Q D        T  RE +  + F     
Sbjct: 69  FRDVAHRIGIDK--VDFIGQDFSAIMPAVANGQYDAAVAAIGITPAREKT--VDFSTGYL 124

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                 +     G+  V+ L+   + V  GT  E    ++F     +   + F       
Sbjct: 125 AGFLTVLTRSDSGVKDVASLAKHRLGVVQGTLQESYAVEHFP----QTDLVRFPDNNSAV 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A      DA   D     A K   +R             +P   AI +G   +   +  
Sbjct: 181 SALNNGTLDAIFLD---YEAAKSYAERFKLVSAADIPSFDAPAGIAIAKGKPAFKAALDG 237

Query: 244 THYAMVT 250
              A + 
Sbjct: 238 AIKAAMQ 244


>gi|223939004|ref|ZP_03630889.1| extracellular solute-binding protein family 3 [bacterium Ellin514]
 gi|223892300|gb|EEF58776.1| extracellular solute-binding protein family 3 [bacterium Ellin514]
          Length = 278

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 81/250 (32%), Gaps = 21/250 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K+ F+  L +I       S         K    L  G+      F      G+  G  VD
Sbjct: 20  KNAFIICLAVICFITAGCSQ--------KAHDKLIVGMELSYPPFEMTDEKGNPAGISVD 71

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + L   +  +   ++           AL++ +ID++  +   T  R  +  + F    
Sbjct: 72  LAQTLGKYLNRE---VEIQNTPFDGLIPALKTGKIDLIISSMTATPER--AQSIDFSDPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              G   +++K   I S+  L   G ++ V+ GTT         K        +V ++  
Sbjct: 127 LRTGLCLLVNKNSSIQSIQDLDQPGKTVAVKKGTTGHTYATGNMKQAK----VLVLDKES 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    + DA+  D  + Y  +           +     +   A  I +G+TE  + 
Sbjct: 183 ACVLEVVQGKADAFIYDQMSTY--QNWKHNEETTRPILKPFKEESWAVGIQKGNTELQSK 240

Query: 241 VSWTHYAMVT 250
           V+        
Sbjct: 241 VNQFLKDFKN 250


>gi|218551435|ref|YP_002385227.1| arginine-binding periplasmic protein 2 [Escherichia fergusonii ATCC
           35469]
 gi|218358977|emb|CAQ91637.1| arginine-binding periplasmic protein 2 precursor [Escherichia
           fergusonii ATCC 35469]
          Length = 271

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V +L    L F + + N            L  G +     +  V A+    GFD
Sbjct: 26  MKQKLLVMLLA--GLSFQATAANTKT---------LHFGTSATYAPYEFVDADNQIVGFD 74

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+   +    ++ Q+   +       L+ K+ D +    D T  RE    ++F  
Sbjct: 75  IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKRE--QQVSFSQ 129

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K   +S ++L G  I ++ GTT +  L D  K        + ++   
Sbjct: 130 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQDKQKE----ITAVAYDSYL 185

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPL----APAIIQGDT 235
                 +++R D   GD   + A+        ++ I+ +              A+ +G+ 
Sbjct: 186 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDERAKDPEYYGKGLGIAVRKGND 242

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 243 ALLAEINAALDKVKASPEYA 262


>gi|317048165|ref|YP_004115813.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316949782|gb|ADU69257.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 242

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 14/219 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +    ++  I+        ++ N    GFDVD   ALS  +        Y  ++ K    
Sbjct: 18  QAADPIRVAIDPTFPPMEYIQ-NNQRTGFDVDLAAALSKQMG---RPWVYTDMDFKAMVP 73

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASIC 149
           ++ + + DI+      T  R+    + F    +  G   ++ K    I +   L+G  + 
Sbjct: 74  SVLAGRQDIVLSAIYITDDRKKV--VDFTDPYFSAGLVVMVKKGDTRIKTPQDLAGKRVA 131

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           VQ GT +   LAD F +       +  E+ EE+  +  A R DA         AL  +  
Sbjct: 132 VQVGTKSVKVLADQFPSA----QSVEVEKNEEMFNSLEAGRADAVVTGKP--AALLYSKT 185

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           R +   ILP+ ++      A+ + + E    ++    A+
Sbjct: 186 RGTT-QILPEPLTHEEYGIAVSKREPELRQQLNDALKAI 223


>gi|205353470|ref|YP_002227271.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205273251|emb|CAR38214.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326628562|gb|EGE34905.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 260

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A G++ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAAGYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGGGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKALI------ELRQDGT-YDKMAKKYFDFNV 257


>gi|255325801|ref|ZP_05366893.1| bacterial extracellular solute-binding protein, family 3
           [Corynebacterium tuberculostearicum SK141]
 gi|255297013|gb|EET76338.1| bacterial extracellular solute-binding protein, family 3
           [Corynebacterium tuberculostearicum SK141]
          Length = 337

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 15/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI KRG L  G++      +   A  GD +GF+VD  R ++  IF DP+K+ +  + + +
Sbjct: 86  DIVKRGRLIVGVDRSNNLMSYRDAATGDVRGFEVDIAREIARDIFGDPNKVDFRFIESSD 145

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL +  +D++ R    +  RE  +   F           ++    GI SV   +G +
Sbjct: 146 RVNALNTGAVDMIVRTMTISPERERDVA--FSIPYMNTQTRMLVLTNSGIKSVKDAAGKT 203

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C    +T   T+ ++          ++     +   A + ++ D    D + L  +   
Sbjct: 204 LCGVGASTALETIREHAPK----SDILITRSWGDCLMALQLNQADGIVVDDALLSGMAAQ 259

Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245
           +       I+ + +       A+               V+ T 
Sbjct: 260 DS---YTSIVGEPLETENYGVAVRRPSKQHNTRPLLRQVNSTL 299


>gi|312899028|ref|ZP_07758415.1| putative glutamine ABC transporter periplasmic protein [Megasphaera
           micronuciformis F0359]
 gi|310619935|gb|EFQ03508.1| putative glutamine ABC transporter periplasmic protein [Megasphaera
           micronuciformis F0359]
          Length = 255

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 86/246 (34%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K F  +++ L ++  ++ +   +          L  G+N     F   +   D+ GFD
Sbjct: 1   MFKKFL-ALITLTLIAVSALTGCGTSSPQGNTEKTLIIGMNPNFPPFEFTQGE-DYVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +   P       +       ALQS QID+++   D T  R     + F  
Sbjct: 59  VDLSKAIAEKLGMKPE---IKAMAFDGLIPALQSGQIDLIASGMDATPERREH--VNFTQ 113

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             + DG   ++ K    I S   L   ++  Q GT           A         F + 
Sbjct: 114 TYFKDGYTIVVRKDNDTIHSFDDLKDITVGAQMGTKAADY------AKQYGAVVKEFNQN 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++      +H CDA   +                   + + I  + +A A  + ++E   
Sbjct: 168 DQCWMELESHTCDAVVVNRVVALYFLNQGGN-KAFKTVGEPILSAGVAMATTKENSELTA 226

Query: 240 IVSWTH 245
            V    
Sbjct: 227 KVDKAL 232


>gi|172037363|ref|YP_001803864.1| solute-binding family protein 3 [Cyanothece sp. ATCC 51142]
 gi|171698817|gb|ACB51798.1| putative extracellular solute-binding protein, family 3 [Cyanothece
           sp. ATCC 51142]
          Length = 276

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 83/257 (32%), Gaps = 11/257 (4%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M  K   + ++ LI          A   L  IK+ G L  G+    + F  V   G W G
Sbjct: 1   MKNKSLILVLITLIFCSIFPSFALAETVLEKIKRTGELNAGVRKDAIPFGYVNQRGKWTG 60

Query: 59  FDVDFCRALSSAIFDDPSK---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + VD    +   +  D ++   +         RF  +Q   +DI+   T  T  R   + 
Sbjct: 61  YSVDLIHLIHKRLEKDLNQSIKLNLREATIDSRFRIVQRGDVDIMCGATTITQTRSKRVD 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +             +           L+   I    GTTT+  +   + + N K     
Sbjct: 121 FSVPFFMTGAQFLVKLEDAPNFDYNGSLNNIPIAFLPGTTTQEIIPQIYPSANWKN---- 176

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-SEHVILP-DIISKSPLAPAIIQG 233
            +  EE     +     A   D   L    +       + V+LP   I++      + Q 
Sbjct: 177 IKNREEGVRKLKRDEVKAVVSDGILLLGEIVQQGNNIEDFVLLPSQPITRELYGCILPQK 236

Query: 234 DTEWYNIVSWTHYAMVT 250
           + +W   V+ T  +   
Sbjct: 237 NPQWKQFVNVTILSPEN 253


>gi|303256935|ref|ZP_07342949.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|302860426|gb|EFL83503.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderiales bacterium 1_1_47]
          Length = 256

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 80/260 (30%), Gaps = 18/260 (6%)

Query: 1   MYKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56
           M K  F++I     L +   T+           K    L+ G N     F    K + D 
Sbjct: 1   MLKRSFLAIPLVAVLSMSLLTACGDKKEAAAPAKAEKVLRVGTNPTFAPFEFQAKGSNDL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +AL   +      ++ + L       AL +  ID+       T  R+    +
Sbjct: 61  TGFDIDLAKALGKQMGYK---VELVNLGFDGLIPALSTGNIDLAVSGMSITEERK--NAV 115

Query: 117 AFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    Y  G    +   +  I  ++ L G  I  Q GTT     +    A         
Sbjct: 116 DFCDPYYTSGLIVLVRPDETNIKGINDLVGKRIGAQIGTTGATKASSVKGA-----DVKQ 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E          DA   D   +           +  ++ DI+       A  +G+ 
Sbjct: 171 YNNANEPFIELDNKGVDAVINDQPVVAYY---LVNGGKGKMVGDIMEAEYYGIAAKKGNK 227

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                V+    A+    E  
Sbjct: 228 ALVKQVNEALAALKKNGEYD 247


>gi|229829574|ref|ZP_04455643.1| hypothetical protein GCWU000342_01671 [Shuttleworthia satelles DSM
           14600]
 gi|229791563|gb|EEP27677.1| hypothetical protein GCWU000342_01671 [Shuttleworthia satelles DSM
           14600]
          Length = 262

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 82/251 (32%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKANGDW 56
           M K   + ++ L  +   +   ++      K    K+  L          +  ++ N D+
Sbjct: 5   MKKIAVLGLVMLTSISILAACGSSKTDDSGKTGSEKKDTLTMATAADFPPYEYMEGN-DY 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KG D++  +A++  +      ++   +        +QS + D           R+    +
Sbjct: 64  KGIDIELSQAIADKLGVK---LEIQNVPFDSIIAGVQSGKYDFGMSGITINDERK--QSV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F        Q  I+     I+    L   + I VQ GTT +      +    +  + + 
Sbjct: 119 NFSDPYISAVQSIIVKSDSSIADKDALKDVSKIGVQTGTTGDSDATKDYGEDKITRYTVA 178

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                +   A  + + DA   D     A +      S   ILP    +   A A+ + + 
Sbjct: 179 ----TDAIQALMSGKVDAVIIDN--KPAQEYVKANGSALKILPTAYEEEQYAIAVNKSND 232

Query: 236 EWYNIVSWTHY 246
           +    ++    
Sbjct: 233 DLQKKINQAIK 243


>gi|330808625|ref|YP_004353087.1| putative amino acid transporter [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376733|gb|AEA68083.1| putative amino acid transporter [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 259

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 84/251 (33%), Gaps = 22/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +L  ++ +  A           ++ GI  G   F+    +G   GFD
Sbjct: 1   MNKLAMFGALALSVLSLSAVAEEA---------KPIRLGIEAGYPPFSMKTPDGKLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     K  ++         AL+ K+ID +  +   T  R+    + F  
Sbjct: 52  VDIGDALCEQM---KVKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK--NVDFTI 106

Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+M +   +    ++L G  + V   +T +    +      +  + + +   
Sbjct: 107 KYYHTPARFVMKEGSEVKDPLTELKGKKVGVLRASTHDRFATEVLVPAGI--NLVRYGSQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E +    A R DA   D   L    L  D       +      +         A+ +GD
Sbjct: 165 QEANLDMVAGRLDAMLADSVNLDDGFLKTDAGKGFAFVGPTYEDAKYFGGGAGIAVRKGD 224

Query: 235 TEWYNIVSWTH 245
               +  +   
Sbjct: 225 KVLADKFNAAI 235


>gi|313496590|gb|ADR57956.1| Cystine transporter subunit [Pseudomonas putida BIRD-1]
          Length = 264

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 12/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  I+++G +  G+      F+    NG   GF+V+    L+  +       + 
Sbjct: 25  AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA---KI 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138
            P        AL+SK++D++      +  R+     +            +  K  +  I 
Sbjct: 82  QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G  + V  GT  E  +               +E      A  R  R DA   D 
Sbjct: 142 GAQDLAGKKVGVGLGTNYEQWVKKDVPQA----DVRTYEDDPSKFADLRNGRIDAILIDR 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A            +  +  D  S+     A+ +G+ E    ++   
Sbjct: 198 LAALEYAQKAK---DTQLAGDAFSRLESGVAMRKGEPELLAAINKAI 241


>gi|260469634|ref|ZP_05813798.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259028601|gb|EEW29913.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 258

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 25/258 (9%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F ++    + L   + S   +          L+ G       F    A+G   GFD+D 
Sbjct: 6   RFVLAASVALTLAAGAASAQDN---------KLRIGTEGAYPPFNYANADGTLGGFDIDL 56

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +AL + +  D    ++   +      ALQ+ + D +      T+  E +  + F    Y
Sbjct: 57  GKALCAEMKAD---CEFTVQDFDGSIPALQAGKFDAIIN---ITITPERAEKVEFTRKYY 110

Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                  + K   I  +S   L G ++ VQ  T        + +          +   ++
Sbjct: 111 QTPPAIAVPKDSPIAGTSPEDLRGKALGVQTATIH----QKFAEQKYAGSTVKAYPTGDD 166

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSP-LAPAIIQGDTEW 237
                   R DA       L       D         +  D     P +  A+ +G+ E 
Sbjct: 167 ARTDMANGRLDAMMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKEL 226

Query: 238 YNIVSWTHYAMVTAEELG 255
            +  +    A+  A +  
Sbjct: 227 ADKFNAAIDALRAAGKYK 244


>gi|306812688|ref|ZP_07446881.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|305853451|gb|EFM53890.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily protein [Escherichia coli NC101]
          Length = 243

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQVFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|239831851|ref|ZP_04680180.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824118|gb|EEQ95686.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 273

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 78/252 (30%), Gaps = 17/252 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V+   + I+  T      +     ++   L  G       F  +  +G   GFDVD
Sbjct: 10  KRITVAASMVGIVATTGGFAIGA--ASAEEPLKLIIGTEGAYPPFNFINPDGSLSGFDVD 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RAL   +    ++  ++         ALQ+ + D    +   T  R+    + F    
Sbjct: 68  IARALCEEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 122

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y    G    K   I   +   L+G +I VQ  TT        F           +   E
Sbjct: 123 YNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEHAFTE----STIKAYPTAE 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236
           E        R DA   D   L     T D     +       D I    +  A+ +G  E
Sbjct: 179 EYRLDMANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDNIHGVGVGVALKKGRPE 238

Query: 237 WYNIVSWTHYAM 248
                +    A+
Sbjct: 239 LVEKFNKAIKAI 250


>gi|322391759|ref|ZP_08065224.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus peroris ATCC 700780]
 gi|321145239|gb|EFX40635.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus peroris ATCC 700780]
          Length = 271

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 20/255 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K  FV    +   F  +  ++ S     +  IK++G L    +     F     V    
Sbjct: 4   KKWIFVLCSLIASFFLVACQSSNSSSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+D  +A++  +      ++   ++      +LQ+ + D+       T  R+   
Sbjct: 64  QVVGADIDMAQAIADELGVK---LEVSSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGA---SICVQAGTTTELTLADYFKAHNMKY 171
              F    Y +   F++ K   +     L+     +I  Q GT  E  + +         
Sbjct: 120 -FDFSIPYYENKMSFLIRK-SDLEKYKDLNSIASANIAAQKGTVPESMVKEQLP----NA 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                  + E     ++ + DA   D     +    N   +   +   +      A AI 
Sbjct: 174 QLTSLTNMGEAVNELQSGKVDAVHMDEPVALSYAGKNSDLAVATVSLTMKEGEANAVAIK 233

Query: 232 QGDTEWYNIVSWTHY 246
           +G ++   +V     
Sbjct: 234 KGSSDLKEVVDKVIQ 248


>gi|319892895|ref|YP_004149770.1| Glutamate ABC transporter, periplasmic glutamine- binding protein
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162591|gb|ADV06134.1| Glutamate ABC transporter, periplasmic glutamine- binding protein
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 486

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 90/258 (34%), Gaps = 23/258 (8%)

Query: 1   MY---KDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49
           M    K   + ++ +  +        + + +      IK RG L+ G++           
Sbjct: 1   MKYLGKLMTMMLIVVFSISGIPAKYDAQAASEDQWDVIKDRGELRVGLSADYAPMEFERT 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V    ++ G D++  + ++     +  K++ + +       AL++ +ID++      T  
Sbjct: 61  VNGEREYAGIDIELAKKIAKD---NGVKLKIVNMQFDSLLGALKTGKIDMIISGMTPTAE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R+    + F        Q  ++ K  K    ++  L+   I  Q  TT E       +  
Sbjct: 118 RKK--EVDFSDNYMTVDQKVVVRKKDKDKYKTLKDLAHHRIGAQKQTTQEELAQKEIE-- 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                     R+ E+  + ++++ DA   D +   A    N+            SK   A
Sbjct: 174 --GADVQSLTRLPEVILSLKSNKVDAIVMDSAVGKAYLEQNED-LTFSDASFADSKKQTA 230

Query: 228 PAIIQGDTEWYNIVSWTH 245
            AI +   +    V+ + 
Sbjct: 231 IAIPKDSPKLLKRVNQSI 248


>gi|294669321|ref|ZP_06734400.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria elongata subsp. glycolytica ATCC 29315]
 gi|291308731|gb|EFE49974.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria elongata subsp. glycolytica ATCC 29315]
          Length = 265

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 88/266 (33%), Gaps = 23/266 (8%)

Query: 1   MYKDFFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K    ++ C  +L             S    A     +      +  +N     F  +
Sbjct: 3   MKKWLATALACSALLTACGGQGQNQGQESAPAGAQGGEKV-----YRVAMNAEFAPFEFM 57

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            +  + +GFDVD   A++ A      K+++        F AL +  +DIL+     T   
Sbjct: 58  DSANNIQGFDVDLVNAMAKA---GNFKVEFKHQPWDSLFPALGNGDVDILASAVTITD-- 112

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNM 169
           +    + F    Y   Q  ++ + K I S   L     + V  GTT +L  +    +   
Sbjct: 113 DRKQTMDFSDPYYKITQVILVPQGKTIKSAEDLKQVNKVGVVTGTTGDLAASKTLGS--D 170

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 FE +  +         DA   D + +      N      ++     ++     A
Sbjct: 171 STKIARFENIILVTKELENGGLDAVISDSAVIANYIKNNGSKGFSMVEIPDFTEENYGFA 230

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +GDT    +++     +  + E  
Sbjct: 231 VRKGDTATVAMLNDALKKVRESGEYD 256


>gi|237732152|ref|ZP_04562633.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2]
 gi|283832472|ref|ZP_06352213.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Citrobacter youngae ATCC 29220]
 gi|226907691|gb|EEH93609.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2]
 gi|291072131|gb|EFE10240.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Citrobacter youngae ATCC 29220]
          Length = 243

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +S+ QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSIDQLKGKKVGVQNGTTHQKFIMDKHPE----VTTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LQQKFNAAL 224


>gi|170020734|ref|YP_001725688.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|169755662|gb|ACA78361.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
          Length = 243

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       + P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KNNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|127514094|ref|YP_001095291.1| extracellular solute-binding protein [Shewanella loihica PV-4]
 gi|126639389|gb|ABO25032.1| extracellular solute-binding protein, family 3 [Shewanella loihica
           PV-4]
          Length = 242

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 79/258 (30%), Gaps = 27/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKG 58
           M K   ++    ++L               K++ +L  G N     F  V   +     G
Sbjct: 1   MNKSILLAGFTALLLLSGCG----------KEQDYLVVGTNAAFPPFEYVGGVSGDQVMG 50

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  R ++         ++   +      +AL + +ID+++     T  R+    + F
Sbjct: 51  FDIDLARKVAEDAGK---TLKVENMKFDSLIVALNAGKIDMIASGMTITPERQA--SVDF 105

Query: 119 R-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             P         +  +   I S++ L+G    VQ G+T +        A         F 
Sbjct: 106 SEPYYEATQVVLVNKQDDSIHSLADLTGKHFAVQLGSTAD------MMAKKYTQSVTAFN 159

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E     +  + D    D          N    E  ++           A+ +   E 
Sbjct: 160 TGFEAIMELKNGKVDLVLFDSEPAANYLAKNP---ELKLISLDFPPEFYGFAVAKSQPEL 216

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++ T   M    E  
Sbjct: 217 LASINKTLATMKQNGEYD 234


>gi|330998814|ref|ZP_08322541.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Parasutterella excrementihominis YIT 11859]
 gi|329576028|gb|EGG57547.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           GlnH [Parasutterella excrementihominis YIT 11859]
          Length = 256

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 80/260 (30%), Gaps = 18/260 (6%)

Query: 1   MYKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56
           M K  F++I     L +   T+           K    L+ G N     F    K + D 
Sbjct: 1   MLKRSFLAIPLVAVLSMSLLTACGNKKEAAAPAKAEKVLRVGTNPTFAPFEFQAKGSNDL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  +AL   +      ++ + L       AL +  ID+       T  R+    +
Sbjct: 61  TGFDIDLAKALGKQMGYK---VELVNLGFDGLIPALSTGNIDLAVSGMSITEERK--NAV 115

Query: 117 AFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    Y  G    +   +  I  ++ L G  I  Q GTT     +    A         
Sbjct: 116 DFCDPYYTSGLIVLVRPDETNIKGINDLVGKRIGAQIGTTGATKASSVKGA-----DVKQ 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E          DA   D   +           +  ++ DI+       A  +G+ 
Sbjct: 171 YNNANEPFIELDNKGVDAVINDQPVVAYY---LVNGGKGKMVGDIMEAEYYGIAAKKGNK 227

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                V+    A+    E  
Sbjct: 228 ALVKQVNEALAALKKNGEYD 247


>gi|317486284|ref|ZP_07945116.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316922454|gb|EFV43708.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 252

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 21/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ L +  +  T     AS          L    +T  + F     +G + GFD
Sbjct: 1   MKR---IAALIMGFVLMTVLVAPAS-------AKELVVAHDTNFMPFEFKGPDGKFTGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    ++  +       ++ P++       LQ+  +D+       T  R   +   F  
Sbjct: 51  IELWETIAKKLG---LSYKFQPMDFNGIIPGLQTGNVDVGIAGMTITPERAKVVQ--FSN 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++   +  IS V  L+G  + V+ GT++   + D+ KA         F   
Sbjct: 106 GYYTSGLKILVRDDEKGISKVEDLAGKVVAVKTGTSSVPFMKDFGKAK----ELKQFPNN 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + +     +   DA   D+  + A   +  +    V+ P +           QG+ E   
Sbjct: 162 DGMFFELLSKGVDAVVFDMPVVTAFANSAGKGKAKVVGP-LYEGQKYGIGFAQGNEELVK 220

Query: 240 IVSWTH 245
            V+   
Sbjct: 221 KVNGVL 226


>gi|188590808|ref|YP_001795408.1| high-affinity glutamine transporter, ABC transporter periplasmic
           protein peri_bind) [Cupriavidus taiwanensis LMG 19424]
 gi|170937702|emb|CAP62686.1| high-affinity glutamine transport protein, ABC transporter,
           periplasmic binding component peri_bind) [Cupriavidus
           taiwanensis LMG 19424]
          Length = 251

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 81/245 (33%), Gaps = 20/245 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   ++ L  +       S +A      +    L+   +        +  NG   GFDV
Sbjct: 4   RRKCLIAALSAVAGLTFGASAHA------QDSNVLRVATDATFPPMEFI-ENGKRTGFDV 56

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++  +     ++++  ++ K     L S++ D+       T  R     + F   
Sbjct: 57  ELVEAMAKTMGK---QVEWTNIDFKGLIPGLVSRRFDMAVSGIYITPERRKV--VDFTEP 111

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G   ++      I+    L+G  + VQ GT +   L D +     +   +  E+ +
Sbjct: 112 YYTGGLVALVKSGNTAINKPEDLNGKKVSVQVGTKSVSFLRDTYP----QVTRVEVEKNQ 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+       R DA      A      T        ++   ++      A+ +   E    
Sbjct: 168 EMFNLVEIGRADAAVTGKPAAMQYVKTRGG---LRVVEQQLTTEEYGMAVRKDTPELTRA 224

Query: 241 VSWTH 245
           ++   
Sbjct: 225 LNAAL 229


>gi|18313093|ref|NP_559760.1| solute-binding family 3 protein [Pyrobaculum aerophilum str. IM2]
 gi|18160601|gb|AAL63942.1| bacterial extracellular solute-binding proteins, family 3
           [Pyrobaculum aerophilum str. IM2]
          Length = 282

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 10/244 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            +  IKKRG L  G +     +  V  N    G+DVD  R +++A+     +++   +  
Sbjct: 47  SVDAIKKRGKLIVGTDATWPPWEWVMGN-QIVGWDVDIAREIANALG---VQLELRDMRF 102

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLS 144
                A+++  +D+      WT  RE    L F    Y +    +    +  I+ V  L 
Sbjct: 103 AGLLEAVRNGDVDLAISAITWTTEREKV--LEFSMPYYLESIVVVTKASRTDINKVEDLY 160

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++ VQ GTT E   A   +           +    +    R    DA   D S   AL
Sbjct: 161 GKTVGVQIGTTHEEWAATNLEKPGKASVRRYDKVYPYMVEVLRRGDVDAIILDRSIATAL 220

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263
                       LP       ++ A+ +   +   +V+     ++   +L  I QKN   
Sbjct: 221 VRKFPDLKIAFELPGSAG--YISVAMPKCAQDLKLVVNQVIENLIQTGKLDQIMQKNFEL 278

Query: 264 VSKD 267
             + 
Sbjct: 279 FLQS 282


>gi|186476914|ref|YP_001858384.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia phymatum STM815]
 gi|184193373|gb|ACC71338.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia phymatum STM815]
          Length = 258

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L ++     +           K+   ++ G++     F  +  NG   GFD
Sbjct: 1   MKKYTLCVALAVMASAAMA-----------KEWKTVRIGVDASYPPFESIAPNGHMVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL + +     K  ++  +      AL+ K+ D++  +   T  R     + F  
Sbjct: 50  VDLTKALCAKM---NVKCVWIAQDLDGIIPALKGKKYDMIVSSLTVTDKR--REQIDFSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I  K    + +   L G  + V+ G+T E     Y++        + ++  
Sbjct: 105 KLFDAPARMIAKKGSPLLPTAESLKGKHVGVEQGSTQEAYAKAYWEPRG--VTVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLA----PAIIQGD 234
           +++ A     R DA   D     +  L   R  +      ++     +       + + D
Sbjct: 163 DQVYADLATGRLDAALQDELQADSGFLKTPRGKDFAWAGREVKDAKTIGDGTAIGLRKED 222

Query: 235 TEWYNIVSWTH 245
            E   +++   
Sbjct: 223 GELKAMLNKAL 233


>gi|297199735|ref|ZP_06917132.1| sugar-binding protein [Streptomyces sviceus ATCC 29083]
 gi|297147474|gb|EDY57926.2| sugar-binding protein [Streptomyces sviceus ATCC 29083]
          Length = 350

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 76/242 (31%), Gaps = 17/242 (7%)

Query: 16  FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67
             +  S + + +  IK R      L  G++     +     N     D +GFD+D    +
Sbjct: 73  TLSPSSADGTTIDKIKAREGAKRKLIVGVDQNSYRWGYRNPNSGPKADLEGFDIDLVHRI 132

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  I  DP  +Q+  +   +R  A+Q  ++D++ R       R   +   F    +  GQ
Sbjct: 133 AQDILGDPKAVQFKAIPTNQRIPAIQKGRVDMVVRTMTINCKRLADVA--FSAPYFKTGQ 190

Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHN---MKYHPIVFERVEEID 183
             +  K   I      L+   IC   G+T    L +  +A                 +  
Sbjct: 191 QVLAPKSSDIKGYDGTLAHKKICTAEGSTAFSQLDEDKRAGKLVASADLRTTVPNQLDCL 250

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +   +    +       +     +      A+     +    V+ 
Sbjct: 251 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGSPFTTEYYGVAMKSDADDLVRRVNQ 307

Query: 244 TH 245
             
Sbjct: 308 VL 309


>gi|283784627|ref|YP_003364492.1| arginine ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
 gi|282948081|emb|CBG87646.1| arginine ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
          Length = 243

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    +  ++                +  G++     F  + A+    GFD
Sbjct: 1   MKKLVLAALLASFAVGASAAE-------------KISFGVSATYPPFESLDASNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  LDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    + + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSALVIAKKDAYKTFADLKGKRIGMENGTTHQKYLHDKHPE----VQTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN +   +   +       + L  A+   +    
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGAATEKVTDPQYFGTGLGIAVRPDNKALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNSALAAI 227


>gi|222032592|emb|CAP75331.1| Arginine-binding periplasmic protein 1 [Escherichia coli LF82]
 gi|312945380|gb|ADR26207.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily protein [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 243

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++I+ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRIEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|187924056|ref|YP_001895698.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187715250|gb|ACD16474.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 262

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 17/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +S+     L  +  + +A        +  L+ GI      F      G  +GFD
Sbjct: 1   MLQKLSLSVFVAAALLGSVGTVSAET------QNTLRFGIEAAYPPFESKSPTGQLEGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +       +++         ALQ+++ D ++   + T  R+ ++    RP
Sbjct: 55  VDVGNAVCAKMGVK---CEWVENAFDGLIPALQARKFDAINSAMNITDKRKQTIAFT-RP 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I               +  V  L G  + V   ++ E  L  ++    +    + +   +
Sbjct: 111 IYVVPIVMVAKRSSGLLPDVKSLQGKRVGVLQASSQEDFLKRHWANAGVS--IVSYADQD 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235
           ++ A   A R DA   +   +    L      ++ I    +S            + +GD 
Sbjct: 169 QVYADLVAGRLDAAVQEAQTVQDGFLNKPAGHDYAIAGQPLSDPATLGEGTGFGLRKGDR 228

Query: 236 EWYNIVSWTHYAM 248
                +     A+
Sbjct: 229 ALAGKIDAALDAL 241


>gi|294791749|ref|ZP_06756897.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 6_1_27]
 gi|294793610|ref|ZP_06758747.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 3_1_44]
 gi|294455180|gb|EFG23552.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 3_1_44]
 gi|294456979|gb|EFG25341.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 6_1_27]
          Length = 268

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 77/258 (29%), Gaps = 22/258 (8%)

Query: 2   YKDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58
            K       ++    L     S+N            L  G N   V F         + G
Sbjct: 7   KKIILGGCMLVMAASLVGGCGSSNQPT------SNKLVVGTNATFVPFEFKDEKTQDYTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++  RA+   I  D   ++   +       AL +  ID+ +     T  R  S  + F
Sbjct: 61  FDIELIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y +    +      ++S+  L G  I  Q GTT                    F+ 
Sbjct: 116 SSPYYENALAVVYKDGTAVNSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDH 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEW 237
             E     +    DA   D+    A   +   P +H   +    +K  L  AI + +   
Sbjct: 171 SNEALLELQNSGVDATVIDLP--VAQYYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKAL 228

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++     M    E  
Sbjct: 229 QEEINKAIADMKADGEFN 246


>gi|320175300|gb|EFW50406.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Shigella dysenteriae CDC 74-1112]
          Length = 243

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + L G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYENSAVVIAKK-DTYKTFANLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P   V    +         L  A+   +  
Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALAAI 227


>gi|238760845|ref|ZP_04621942.1| Arginine-binding periplasmic protein 2 [Yersinia aldovae ATCC
           35236]
 gi|238700937|gb|EEP93557.1| Arginine-binding periplasmic protein 2 [Yersinia aldovae ATCC
           35236]
          Length = 243

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 83/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +   L  + F++ +              ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATF--LSGMVFSATAAE-----------TIRFAASATYPPFEFMDANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R  S  + F  
Sbjct: 48  MDLAKALCKQM---DANCTFTNQAFDSLIPALKFKRYDAVISGMDITPER--SKQVTFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDLHPE----IKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   ++   
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPDLASVGKHVTDPQYFGTGLGIAVRPDNSALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNKAIDAI 227


>gi|253700905|ref|YP_003022094.1| extracellular solute-binding protein family 3 [Geobacter sp. M21]
 gi|251775755|gb|ACT18336.1| extracellular solute-binding protein family 3 [Geobacter sp. M21]
          Length = 248

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 20/250 (8%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      ++++    L F S +  A           +    +        V AN    GF
Sbjct: 1   MKAIRIMLAVVAFAGLCFASAALAAP--------KTVTVATDATWPPMEFVDANKKIVGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+DF  A++           +        F  + + Q D +  +   T  R+      F 
Sbjct: 53  DIDFMNAVAKEAGFQA---SFKNTAWDGIFAGIAAGQYDAIISSVTITNERKA--KFDFT 107

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 GQ  ++ K +  + ++ L G  I  Q GTT  + +               ++ V
Sbjct: 108 VPYISIGQILVVPKAEKGTKIADLKGKKIGAQIGTTGAMEIKKVA-----GVELKTYDEV 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                   A R      D        L   +   +  I+    +K      + +G+ E  
Sbjct: 163 GLAFEDMAAGRISGVVCDQPTAVTYALDKKEYNKKFKIVGQPFTKEAYGIVVKKGNKELV 222

Query: 239 NIVSWTHYAM 248
            +++    A+
Sbjct: 223 ALLNKGIAAV 232


>gi|161613484|ref|YP_001587449.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161362848|gb|ABX66616.1| hypothetical protein SPAB_01201 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 244

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +  +L  +K+RG L  G+      F+    +G   GF+VDF  AL+  +          
Sbjct: 7   ADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHLGVKAL---LK 63

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
           P        +L +K+ID++      + +R+      F       G   ++ K     I +
Sbjct: 64  PTKWDGILASLDAKRIDVVINQVTISDVRKK--KYDFSTPYTVSGVQALVKKGNEGTIKT 121

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G  + V  GT  E  L  +            ++         R  R DA   D  
Sbjct: 122 AADLQGKKVGVGLGTNYEEWLRQHV----QGVDIRTYDDDPTKYQDLRVGRIDAILVDR- 176

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L AL L         +  D  S+     A+ +G+ +    V    
Sbjct: 177 -LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAI 221


>gi|146306128|ref|YP_001186593.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas mendocina ymp]
 gi|145574329|gb|ABP83861.1| L-ornithine-binding protein / L-arginine-binding protein
           [Pseudomonas mendocina ymp]
          Length = 258

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 79/254 (31%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L      + +   +          L+ GI      FA   A+G   GFD
Sbjct: 1   MNKIALFGALALSTFGTFAVAAEPA----------LRIGIEAAYPPFAFKTADGKIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L + +     K Q++         +L+ +++D +  +   T   +    + F  
Sbjct: 51  YDIGNELCAQM---QVKCQWVEQEFDGLIPSLKVRKVDAVLSSMSITE--DRLKSVDFSK 105

Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M +   I   S  L G  + VQ  +T +              + + +   
Sbjct: 106 KYYHTPGKLVMKEGSQIQDPSVDLKGKKVAVQRASTYDRYATAELTPAG--VNVVRYGSN 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            E      A R DA   D+  +    L  D      ++    +           A+ +GD
Sbjct: 164 NEAFLDLLAGRVDAVLADVVNIDEGFLKTDGGKGFALVGPDFNDPRYFGRGAGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
                 ++    A+
Sbjct: 224 AATAEKLNAAIDAI 237


>gi|16761280|ref|NP_456897.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29141024|ref|NP_804366.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56412748|ref|YP_149823.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|167549640|ref|ZP_02343399.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168229730|ref|ZP_02654788.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194468551|ref|ZP_03074535.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197361682|ref|YP_002141318.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|213161135|ref|ZP_03346845.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213418062|ref|ZP_03351137.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
 gi|213426989|ref|ZP_03359739.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213622202|ref|ZP_03374985.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213649622|ref|ZP_03379675.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|213852677|ref|ZP_03382209.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|289827476|ref|ZP_06546088.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25296356|pir||AI0800 lysine-arginine-ornithine-binding periplasmic protein precursor
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|16503579|emb|CAD07587.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29136649|gb|AAO68215.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|56127005|gb|AAV76511.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|194454915|gb|EDX43754.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197093158|emb|CAR58602.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|205325477|gb|EDZ13316.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205335779|gb|EDZ22543.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 260

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257


>gi|148545498|ref|YP_001265600.1| cystine transporter subunit [Pseudomonas putida F1]
 gi|148509556|gb|ABQ76416.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 264

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 12/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  I+++G +  G+      F+    NG   GF+V+    L+  +       + 
Sbjct: 25  AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA---KI 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138
            P        AL+SK++D++      +  R+     +            +  K  +  I 
Sbjct: 82  QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G  + V  GT  E  +               +E      A  R  R DA   D 
Sbjct: 142 GAQDLAGKKVGVGLGTNYEQWVKKDVPQA----DVRTYEDDPSKFADLRNGRIDAILIDR 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A            +  +  D  S+     A+ +G+ E    ++   
Sbjct: 198 LAALEYAQKAK---DTQLAGDAFSRLESGVALRKGEPELLAAINKAI 241


>gi|291616876|ref|YP_003519618.1| ArtI [Pantoea ananatis LMG 20103]
 gi|291151906|gb|ADD76490.1| ArtI [Pantoea ananatis LMG 20103]
          Length = 246

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  V AN   +GFDVD   AL   +    +   +          +L+ 
Sbjct: 25  TIRIATEASYPPFEFVDANNKIQGFDVDLANALCKEM---DATCTFTNQAFDSLIPSLKF 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D +    D T  RE    + F    Y +   F+  K   ++SV  L G  + VQ GT
Sbjct: 82  RRFDAVMAGMDITPEREK--QVLFSKPYYDNSAIFVAQKG-KVASVEALKGKRVGVQNGT 138

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L D     +     + ++  +      +  R DA  GD + +      N +  P 
Sbjct: 139 THQKYLTD----KHADITVVPYDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNAKLAPV 194

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       + L  A+ QG+TE  +  +   
Sbjct: 195 GEKVTDKAYFGTGLGIAVRQGNTELQSKFNTAL 227


>gi|254702999|ref|ZP_05164827.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686]
          Length = 251

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 15/243 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +  +++         A      K+   ++         F  +  +G   GFD+D   
Sbjct: 1   MAGLASVVLTVSIQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFDLDIAN 54

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL  A+    +K   +  +      +LQ+ + D +  +   T  R+  +   F    Y  
Sbjct: 55  ALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTDRYYTT 109

Query: 126 GQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
               ++ K   I S   S  +G  +  QAGTT      D +          ++   +E +
Sbjct: 110 PLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPTADEAN 167

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A   + R DA   D                  +     S++ +A A+ QGD +     + 
Sbjct: 168 ADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLREQFNA 227

Query: 244 THY 246
              
Sbjct: 228 AIK 230


>gi|21223627|ref|NP_629406.1| secreted protein [Streptomyces coelicolor A3(2)]
 gi|256785262|ref|ZP_05523693.1| secreted protein [Streptomyces lividans TK24]
 gi|289769153|ref|ZP_06528531.1| secreted protein [Streptomyces lividans TK24]
 gi|9968710|emb|CAC05959.1| secreted protein [Streptomyces coelicolor A3(2)]
 gi|289699352|gb|EFD66781.1| secreted protein [Streptomyces lividans TK24]
          Length = 320

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 19/254 (7%)

Query: 17  FTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
               +  A  L   I+ +G +K G +           +G   G D D   AL   +    
Sbjct: 49  SAGGAPLADKLPQSIRDKGTIKVGSDIAYAPVEFKDDSGKTVGIDPDLADALGKQLGVK- 107

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFD 125
              ++           L+SK+ DI       T  R+             G+ F    +  
Sbjct: 108 --FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDGDTGKKVGQGVDFVD-YFTA 164

Query: 126 GQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEE 181
           G      K   +GI + S L G  + VQ GT +E       +      K     F+  ++
Sbjct: 165 GVSIYTKKGDDQGIKTWSDLCGKKLVVQRGTVSEDLAKAENEKCPAGKKISMQPFDNDQQ 224

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                RA   DA + D         T+    +  ++ + +  +P   A+ + +T+  + +
Sbjct: 225 AQTRLRAGGADAGSSDFPVAAYAVKTSGGGKDFELVGEQVEAAPYGIAVAKDNTQLRDAL 284

Query: 242 SWTHYAMVTAEELG 255
                A++   E  
Sbjct: 285 KAALDAVIANGEYK 298


>gi|15800618|ref|NP_286632.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 EDL933]
 gi|15830200|ref|NP_308973.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|168750052|ref|ZP_02775074.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4113]
 gi|168756662|ref|ZP_02781669.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4401]
 gi|168763282|ref|ZP_02788289.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767378|ref|ZP_02792385.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4486]
 gi|168776409|ref|ZP_02801416.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779420|ref|ZP_02804427.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787089|ref|ZP_02812096.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC869]
 gi|168799850|ref|ZP_02824857.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC508]
 gi|195936912|ref|ZP_03082294.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. EC4024]
 gi|208808622|ref|ZP_03250959.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4206]
 gi|208816255|ref|ZP_03257434.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822439|ref|ZP_03262758.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397117|ref|YP_002269536.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4115]
 gi|217324500|ref|ZP_03440584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. TW14588]
 gi|254792062|ref|YP_003076899.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           coli O157:H7 str. TW14359]
 gi|261225517|ref|ZP_05939798.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258514|ref|ZP_05951047.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291281865|ref|YP_003498683.1| Arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Escherichia coli O55:H7 str. CB9615]
 gi|12513884|gb|AAG55242.1|AE005267_7 arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360405|dbj|BAB34369.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|187768202|gb|EDU32046.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4196]
 gi|188015722|gb|EDU53844.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002776|gb|EDU71762.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4076]
 gi|189356239|gb|EDU74658.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363375|gb|EDU81794.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4486]
 gi|189366498|gb|EDU84914.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373113|gb|EDU91529.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC869]
 gi|189377781|gb|EDU96197.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC508]
 gi|208728423|gb|EDZ78024.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4206]
 gi|208732903|gb|EDZ81591.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4045]
 gi|208737924|gb|EDZ85607.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4042]
 gi|209158517|gb|ACI35950.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC4115]
 gi|209775298|gb|ACI85961.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775300|gb|ACI85962.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775302|gb|ACI85963.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775304|gb|ACI85964.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|209775306|gb|ACI85965.1| arginine 3rd transport system periplasmic binding protein
           [Escherichia coli]
 gi|217320721|gb|EEC29145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. TW14588]
 gi|254591462|gb|ACT70823.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290761738|gb|ADD55699.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O55:H7 str. CB9615]
 gi|320192652|gb|EFW67293.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. EC1212]
 gi|320637733|gb|EFX07525.1| putative ABC transporter arginine-biding protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320642856|gb|EFX12057.1| putative ABC transporter arginine-biding protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320648313|gb|EFX16968.1| putative ABC transporter arginine-biding protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320654151|gb|EFX22219.1| putative ABC transporter arginine-biding protein [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320659775|gb|EFX27331.1| putative ABC transporter arginine-biding protein [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664245|gb|EFX31396.1| putative ABC transporter arginine-biding protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326338243|gb|EGD62072.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. 1125]
 gi|326346220|gb|EGD69958.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli O157:H7 str. 1044]
          Length = 243

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITAEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|312961851|ref|ZP_07776349.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311284110|gb|EFQ62693.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 259

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 86/249 (34%), Gaps = 17/249 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             S+   ++L   + + +A    +I      + G+      F  V A+G  +GFD++   
Sbjct: 4   LRSLFAALLLPLCATAAHAQEWKEI------RFGVFPEYPPFESVAADGSLQGFDIELGN 57

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+ + +     K  ++         AL++++ D +  +   T  RE    + F    +  
Sbjct: 58  AICAKL---EVKCTWVHNEFDGMIPALRARKFDAIMSSMAVTPAREK--QIDFTDRLFLS 112

Query: 126 GQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               I  K      +   L G  + V  G+  E     +            ++  ++  A
Sbjct: 113 PTSVITRKGADFGDTPESLKGKQVGVLQGSLQEAYARAHLAKLG--AQVKAYQSQDQNYA 170

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEWYNIV 241
             +  R DA   D        L+    ++    P   D      +A  + + D E  +++
Sbjct: 171 DLQNGRLDATLTDKLEAQLNFLSKPEGADFKTGPAFKDPTLPLDIAMGLRKNDQELRDLI 230

Query: 242 SWTHYAMVT 250
           +    A+  
Sbjct: 231 NKGIAAVQA 239


>gi|271501285|ref|YP_003334310.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Dickeya dadantii Ech586]
 gi|270344840|gb|ACZ77605.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech586]
          Length = 259

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 85/250 (34%), Gaps = 22/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L+   F + S  A +  +IK       G +     F    A+G   GFD
Sbjct: 1   MKKMLKLLPLALV---FAAGSAFAEVPKNIK------IGTDPTYAPFESKDASGQLVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKDLCQRI---KANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V   +T E     Y++   +    + ++  
Sbjct: 107 KLYAANARLIAKKGSPIVPALDALKGKRVGVLQASTQEAYANQYWQPKGVD--VVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   + R DA   D  A     L      ++      +    L        + + +
Sbjct: 165 DLIYADLTSGRIDAAFQDEVAGSEGFLKQAAGKDYAFAGPAVKDDKLFGVGTGMGLRKDE 224

Query: 235 TEWYNIVSWT 244
           T+    +   
Sbjct: 225 TDLKVALDKA 234


>gi|15672545|ref|NP_266719.1| glutamate or arginine ABC transporter substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|12723450|gb|AAK04661.1|AE006290_6 glutamate or arginine ABC transporter substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|326406064|gb|ADZ63135.1| glutamate or arginine ABC transporter substrate binding protein
           [Lactococcus lactis subsp. lactis CV56]
          Length = 269

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 25/272 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
           M K     +    +    +     +  + +  +KK G LK  ++     F          
Sbjct: 1   MKKLALGMVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKN 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G DVD   A+   +      ++   ++      +L + + DI          RE   
Sbjct: 61  TVVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            + F  + Y      ++ K       SV    G  +  Q G+T E  +   FK       
Sbjct: 116 SVNFSDVYYTASNYLVVKKSDLSKYRSVDDFKGKKVAAQKGSTQEGIVTSQFK----GAT 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAI 230
            I   ++ +     +  +      +     +    N        +     K       A+
Sbjct: 172 EIALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVDVKTPKDSYGSAVAL 230

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
            +G  E   +V+         EEL   Q N +
Sbjct: 231 PKGSDELTKVVNSVIK-----EELKNGQINKD 257


>gi|159026759|emb|CAO86640.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 276

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 86/254 (33%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
           M K+F++  L L+++     S  A   L  I + G LK         F+ +    G W G
Sbjct: 1   MSKNFWLIFLGLLLINNLHLSVLAETVLQRIARTGELKAAARKDATPFSYIDEKTGQWTG 60

Query: 59  FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + V+  R +   +      P  I +       RF  ++  Q+ +       T  R     
Sbjct: 61  YGVELMRLVQRRLAQELGKPITITFTEATTNNRFQQVEQGQVYLSCNTATITEER--LEK 118

Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    +  G  F+  ++    I   + L+  +I     TTT+  +   +   N +   
Sbjct: 119 VNFSTPYFMTGAQFLTKRENVDKIDINNTLAAVAIAYIPHTTTDSIIRYIYPLANWQ--- 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILP-DIISKSPLAPAII 231
                  E  A  +     A   D   L    +     P + V+LP   I+       + 
Sbjct: 176 -AVSDRSEAVAKLQRGEVKAVVSDGILLLGELVKQGQDPRQFVLLPSQPITTELYGCILP 234

Query: 232 QGDTEWYNIVSWTH 245
           + D EW   V    
Sbjct: 235 KNDPEWKKFVDTVV 248


>gi|301052510|ref|YP_003790721.1| amino acid ABC transporter amino acid-binding protein [Bacillus
           anthracis CI]
 gi|300374679|gb|ADK03583.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus biovar anthracis str. CI]
          Length = 265

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIVGVEGFIQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|15966715|ref|NP_387068.1| putative amino acid-binding periplasmic ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307300250|ref|ZP_07580030.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|307321127|ref|ZP_07600531.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|15075987|emb|CAC47541.1| Putative DL-2-aminoadipic acid ABC transporter, periplasmic
           solute-binding component [Sinorhizobium meliloti 1021]
 gi|306893202|gb|EFN23984.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306904416|gb|EFN35000.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 275

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 84/262 (32%), Gaps = 22/262 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F    + +  L F + +     L  +  +  +    N+G    + +  + +  GFD
Sbjct: 1   MKGLFAKLAIGVAALAFVTAAQAGETLDRVMGKKAMVVATNSGWPPQSYLDDSNELVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   + +   +           + D+   +   T  R  +  + F  
Sbjct: 61  IDVSKEIAKRLGVE---VSFETPDWATLTGGRWQGRYDLGVGSVTPTKAR--AQVIDFAG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF---- 176
           I YF    +++HK     SV+ L+G  I V+  TT+E  +    +       PI +    
Sbjct: 116 IYYFSPYVYVLHKDSQAKSVADLNGKIIGVETATTSEDFIRRQLEIDAPGLPPIEYKIEP 175

Query: 177 ---ERVEEI---DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPL 226
                  +        R     R DA                      +L  +   + PL
Sbjct: 176 GEIRTFADSMLPFDDLRLGDGVRLDAVIAPE---QTALNAVKNGYPLRVLEGEYAFREPL 232

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
                + D +W   V      M
Sbjct: 233 VVIAEKVDPDWTKKVGSIIDEM 254


>gi|254502159|ref|ZP_05114310.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
 gi|222438230|gb|EEE44909.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
          Length = 253

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 15/234 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              K    ++ G       F  + A+G   GFD+D   AL   +  +    +++  +   
Sbjct: 15  ATAKDWSKVRIGTEGAYPPFNSLTADGQLVGFDIDIANALCEEMKVE---CEFVTQDWDG 71

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSG 145
              ALQ+ + D +  +   T  R+    + F    Y       + K   ++  +   LSG
Sbjct: 72  MIPALQAGKYDAIIASMSITEERK--QKVDFTNKYYNTPPSIGVPKDTKLTGVTKEDLSG 129

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             +  Q+ TT       +F          ++   +E        R DA   D+  L    
Sbjct: 130 ILLGAQSSTTHSNYAEAHFP----DAELKLYPTADEYKLDLENGRIDAVIEDVVVLSDWL 185

Query: 206 LTNDRPSEHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            T++     V        +I+      A+ +G+ E  +  +    A++   +  
Sbjct: 186 ATDNGACCKVLSTLKSDPVINGEGAGIALRKGEDELKDKFNAAIEAILANGKYK 239


>gi|296532448|ref|ZP_06895172.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296267223|gb|EFH13124.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 299

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 106/277 (38%), Gaps = 20/277 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S   S L  IK RG L  G  +    +    A+G  +G D+D  R L+ ++FDDP+K+++
Sbjct: 42  SAGRSRLQMIKDRGRLIVGTGSTNPPWHFEGADGKLQGMDIDLARLLAKSLFDDPNKVEF 101

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +   +  R  +L + ++DI+ +    T  R  +  + F    Y +G   ++  +      
Sbjct: 102 VLQGSDARIPSLITDKVDIVVQWMTVTPGR--AQQVEFTIPYYREGVTLLLLARGAKYQN 159

Query: 141 SQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              +  A   V  G    + + ++ +    +     FE  + +  A  A R DAY  D S
Sbjct: 160 YDAMKAAGNAVTVGGMQNVFMEEWVRKALPQAKVDAFESPDAVLQALNARRIDAYMADQS 219

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              A  L    P   V        +  A A+  GD  W N V+  +   +   +      
Sbjct: 220 --AARWLMQQTPGRFVDAGYGWMPNSYASAVKPGDPVWLNWVNTVYKEAMMGVDFDYFAA 277

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           +             +++ GI+        +G   ++ 
Sbjct: 278 SY------------KKWFGIELP---TPKIGYPNEFA 299


>gi|262041040|ref|ZP_06014259.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259041598|gb|EEW42650.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 250

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  ++                ++         F  V AN    GFD
Sbjct: 8   MKKVLIAALLAGMSLSASAAQ-------------TIRFATEASYPPFELVDANNQIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +           L+ ++ D +    D T  RE    + F  
Sbjct: 55  VDLANALCKEI---DATCTFTNQAFDSLIPGLKFRRFDAVMAGMDITPEREK--QVLFST 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +S+ QL G  + VQ GTT +  + D           + ++  +
Sbjct: 110 PYYNNSALFVGQQG-KFTSIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD + +         P    +   +  K+     L  A+ QG+T+
Sbjct: 165 NAKLDLQNGRIDAVFGDTAVVTEWL--KSNPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 222

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 223 LQQKFNAAL 231


>gi|229543205|ref|ZP_04432265.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
 gi|229327625|gb|EEN93300.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
          Length = 265

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 79/258 (30%), Gaps = 23/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K      +  ++L  T+          S +  + G IK +G L  G       F+   
Sbjct: 1   MRKYIKWLAVFCLLLALTACGKNTDNQNASKSNDLYGQIKSKGVLLIGTEGTYPPFSFH- 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG   G+D+D  + ++  +        +        F  L SK+ D+++         +
Sbjct: 60  KNGKLTGYDIDVAKEVAKRLGLKAE---FKETQWDAMFAGLNSKRFDMIANQVGI--RAD 114

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                 F           ++ K    I S + L G     Q+ T+   T+A    A+   
Sbjct: 115 RQKKYDFSTPYTISKAVVLVRKDNTNIKSFADLKGKKSA-QSLTSNFATIAKKNGAN--- 170

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +  E   +      ++R DA   D       K          +       S  A   
Sbjct: 171 --IVSVEGFNQAIQLLTSNRVDATVNDSLTYLDYKKQKPNA-AIKVAATANDASKSALLF 227

Query: 231 IQGDTEWYNIVSWTHYAM 248
            +   +  + V+     M
Sbjct: 228 RKHSGKLTDKVNDALKDM 245


>gi|312142891|ref|YP_003994337.1| extracellular solute-binding protein family 3 [Halanaerobium sp.
           'sapolanicus']
 gi|311903542|gb|ADQ13983.1| extracellular solute-binding protein family 3 [Halanaerobium sp.
           'sapolanicus']
          Length = 244

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L +  +F  SFS  A              G + G   F  V  +G+  GFD
Sbjct: 1   MKK-ILVLMLLVFAVFAFSFSAYAETY---------VVGTSAGFPPFEYV-EDGEIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + +    +   +++  ++      AL +  IDI++     T  R     L F  
Sbjct: 50  MDLITEIGNRQGFE---VEFRDISFDSLIPALTTGSIDIIAAAMTITEERAEV--LDFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             Y   Q  ++H+              I VQ GTT ++ + D+     +   +   ++  
Sbjct: 105 PYYSANQAVLVHEDSEEGLTILFGDNDIGVQTGTTGDIWVQDHLVEPGILTGNVRNYDSF 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +         D    D         +   P    ++ +II+      A+ QG+ E   
Sbjct: 165 VLVIRDLANQNIDGVVLDKP--VGETYSQGNPV--KVVAEIITGEEYGMAVAQGNDELLE 220

Query: 240 IVS 242
            ++
Sbjct: 221 KIN 223


>gi|300811418|ref|ZP_07091914.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497653|gb|EFK32679.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 279

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 16/236 (6%)

Query: 18  TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
           ++ +  +     +   +K    +  G+      F          +GF++D  R L+  I 
Sbjct: 24  SACAVESDNSVRVYNHVKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEIL 83

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K +++ + A+ +   L++  +D +      T  R+    + F    +  G   +  
Sbjct: 84  GKDGKAKFIEVTAQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141

Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
               I S+  L+  G    V  GTT    +A              +        A  A +
Sbjct: 142 TSSPIKSIKDLNHKGRVAIVVKGTTAADDIARLAPKAK----IRQYNDYGACTNALLAGQ 197

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            DA   D   L  +           ++   ++  P   A+ +G T+    ++    
Sbjct: 198 GDAVATDNGILAGIADQQK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250


>gi|149201666|ref|ZP_01878640.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. TM1035]
 gi|149144714|gb|EDM32743.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. TM1035]
          Length = 269

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 89/229 (38%), Gaps = 11/229 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + +  + L  ++   TS +  A  L DIK  G +  G+      +  + ++G+ +G ++D
Sbjct: 2   RTYIKAALTAVVATLTSTAAMADALQDIKDAGKIVVGVKQDYKPWGYLTSDGELQGLEID 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +  +   ++ +P+ A  R   LQ  +I+++         R   +G+      
Sbjct: 62  LAKDVAERLGVE---VELVPVVASNRMEFLQQGRINLIIATMGDNEQRRQVIGMIEPNYY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                     K  G+ +   L GA +C   G+     +   +  +      + F  + E 
Sbjct: 119 AGGTNVLA-PKAAGLKNWEDLKGADVCALQGSYYNKRVTQLYGPN-----LVAFAGIPEA 172

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            AA     C A+  D + + +   ++ + +E  +        P A +I 
Sbjct: 173 TAALLNGSCIAFLYDNTWIESQLASDAQWAEFEMPFPTE--DPQAWSIA 219


>gi|17988946|ref|NP_541579.1| cystine-binding periplasmic protein precursor [Brucella melitensis
           bv. 1 str. 16M]
 gi|225686456|ref|YP_002734428.1| family 3 extracellular solute-binding protein [Brucella melitensis
           ATCC 23457]
 gi|256043564|ref|ZP_05446491.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256262404|ref|ZP_05464936.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           2 str. 63/9]
 gi|260564758|ref|ZP_05835243.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           1 str. 16M]
 gi|265989982|ref|ZP_06102539.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984779|gb|AAL53843.1| cystine-binding periplasmic protein precursor [Brucella melitensis
           bv. 1 str. 16M]
 gi|225642561|gb|ACO02474.1| extracellular solute-binding protein family 3 [Brucella melitensis
           ATCC 23457]
 gi|260152401|gb|EEW87494.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           1 str. 16M]
 gi|263000651|gb|EEZ13341.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092137|gb|EEZ16434.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           2 str. 63/9]
 gi|326410834|gb|ADZ67898.1| family 3 extracellular solute-binding protein [Brucella melitensis
           M28]
 gi|326554125|gb|ADZ88764.1| family 3 extracellular solute-binding protein [Brucella melitensis
           M5-90]
          Length = 257

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 73/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++     R  R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVRTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|26986970|ref|NP_742395.1| cystine transporter subunit [Pseudomonas putida KT2440]
 gi|24981584|gb|AAN65859.1|AE016214_4 cysteine ABC transporter, periplasmic cysteine-binding protein,
           putative [Pseudomonas putida KT2440]
          Length = 264

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 12/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  I+++G +  G+      F+    NG   GF+V+    L+  +       + 
Sbjct: 25  AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA---KI 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138
            P        AL+SK++D++      +  R+     +            +  K  +  I 
Sbjct: 82  QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L+G  + V  GT  E  +               +E      A  R  R DA   D 
Sbjct: 142 GAQDLAGKKVGVGLGTNYEQWVKKDVPQA----DVRTYEDDPSKFADLRNGRIDAILIDR 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A            +  +  D  S+     A+ +G+ E    ++   
Sbjct: 198 LAALEYAQKAK---DTELAGDAFSRLESGVALRKGEPELLAAINKAI 241


>gi|222087274|ref|YP_002545809.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221724722|gb|ACM27878.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 296

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 99/264 (37%), Gaps = 18/264 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + +  L +      +  A  L  I ++G ++ G  T  V F+  K +G+  G+ +D C  
Sbjct: 9   LVLAGLALGVAAHVAAAAQTLDLIARKGTIRIGYITDEVPFSFKKKDGNPAGYTIDLCGK 68

Query: 67  LSSAIFDDPSKI--QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           ++ A+     ++   Y+ +   + F A++S QID+L       L R     + F    + 
Sbjct: 69  IADAVARKLPQVKRDYVEITLADGFDAVKSNQIDLLCGAVTINLGR--RDSVDFSQPIFL 126

Query: 125 DGQGFIMHKKKGISSVSQLSGAS--------------ICVQAGTTTELTLADYFKAHNMK 170
            G   ++ K                            I V+A TTT  TL +       +
Sbjct: 127 TGASALLRKDSPEYLQILFLDKRPTRATDRKSPSASIIGVRADTTTGATLREALGPDVPQ 186

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              + F   ++   A   H+ DAY  D + L +L      PS   I   + +  P   A+
Sbjct: 187 TRVVDFSTHQDGLNALENHKIDAYFADRALLISLAAHARAPSTLAIGNRLFTHEPYGIAL 246

Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254
            + D+ +  +V         +++ 
Sbjct: 247 RRDDSTFRLLVDQALTEFYQSDDF 270


>gi|152969453|ref|YP_001334562.1| arginine 3rd transport system periplasmic binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893924|ref|YP_002918658.1| arginine 3rd transport system periplasmic binding component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|288936334|ref|YP_003440393.1| cationic amino acid ABC transporter periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|290510610|ref|ZP_06549980.1| arginine transport system substrate-binding protein [Klebsiella sp.
           1_1_55]
 gi|329998471|ref|ZP_08303108.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella sp. MS 92-3]
 gi|150954302|gb|ABR76332.1| arginine 3rd transport system periplasmic binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546240|dbj|BAH62591.1| arginine 3rd transport system periplasmic binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891043|gb|ADC59361.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|289777326|gb|EFD85324.1| arginine transport system substrate-binding protein [Klebsiella sp.
           1_1_55]
 gi|328538661|gb|EGF64757.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella sp. MS 92-3]
          Length = 250

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  ++                ++         F  V AN    GFD
Sbjct: 8   MKKVLIAALLAGMSLSASAAQ-------------TIRFATEASYPPFELVDANNQIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +           L+ ++ D +    D T  RE    + F  
Sbjct: 55  VDLANALCKEI---DATCTFTNQAFDSLIPGLKFRRFDAVMAGMDITPEREK--QVLFST 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +S+ QL G  + VQ GTT +  + D           + ++  +
Sbjct: 110 PYYDNSALFVGQQG-KFTSIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD + +         P    +   +  K+     L  A+ QG+T+
Sbjct: 165 NAKLDLQNGRIDAVFGDTAVVTEWL--KSNPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 222

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 223 LQQKFNAAL 231


>gi|224476916|ref|YP_002634522.1| hypothetical protein Sca_1432 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421523|emb|CAL28337.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 491

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 16/212 (7%)

Query: 5   FFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGF 59
             +S   +     +  + +       +IKKRG LK G++                ++ G 
Sbjct: 16  LLLSFALVFGSLGSKVNAAVQDKTWEEIKKRGVLKVGLSADYAPLEFESHKNGKREYVGI 75

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + ++     +  K++ + +N      AL++ +ID++      T  R+    + F 
Sbjct: 76  DIDIAKKIAKD---NGLKLEIVNMNFDSLLGALKTGKIDMIISGMTPTPERKK--EVDFS 130

Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 GQ  ++ K       S+   +   I  Q  TT E    +  +            
Sbjct: 131 DSYLKSGQTMVVKKTNIDKYKSLKDFANKRIGAQKQTTQEELAKNEIE----NADIQSMT 186

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           R+ E+  A ++ + D    +     A    N 
Sbjct: 187 RLPEVIMALKSGKTDGAIIEGPVAEAYLQQNP 218


>gi|241889508|ref|ZP_04776807.1| arginine-binding extracellular protein ArtP [Gemella haemolysans
           ATCC 10379]
 gi|241863815|gb|EER68198.1| arginine-binding extracellular protein ArtP [Gemella haemolysans
           ATCC 10379]
          Length = 273

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 95/259 (36%), Gaps = 20/259 (7%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55
           M K   F  SI+ ++IL   S S   + L ++K++  +  G++     +  +     N  
Sbjct: 1   MKKLVLFITSIITVVILTACSSSNTKNKLQEVKEKNKIVLGVSPDYPPYEFLTTENGNKK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+     ++  +     +++   +       AL + ++D++    + T  R+    
Sbjct: 61  VVGADIYLAEQVAKKLG---VQVEIQQMAFDSLIAALNANKVDMVISGVNPTEERKK--A 115

Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F  + Y     F+++K    I SV+ L    I VQ G+T E    +  K      +  
Sbjct: 116 VDFSDVYYTSKGIFVVNKDSEEIKSVADLKNKKIGVQKGSTYETYAKEQLKM--DDKNIQ 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAI 230
               V  +    +  + DA           K+  ++ ++  I        P    +A   
Sbjct: 174 ALTDVPSLLQDLKNKKIDAVLIPDDV---AKIAMNKYTDIKISSFTADNDPEATGMAIVF 230

Query: 231 IQGDTEWYNIVSWTHYAMV 249
            +G  +    +     A++
Sbjct: 231 KKGKNDSNKELLEQVNAVI 249


>gi|228950911|ref|ZP_04113033.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228808759|gb|EEM55256.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 264

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +     +  + +       + S  +S      ++   +  ++     F   + +    
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSTNGEK-EFRYAMSGLYKPFNYKENDSKLV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++
Sbjct: 60  GFDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114

Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G   F+  K   ISS   L G  I V   +T +  +A              +
Sbjct: 115 FSNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +            R DA   D   +  L++  +  S        ++   +  AI + D E
Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226

Query: 237 WYNIVSWTHYAMV 249
               V+     ++
Sbjct: 227 MVEKVNKALDEII 239


>gi|254712479|ref|ZP_05174290.1| hypothetical protein BcetM6_03671 [Brucella ceti M644/93/1]
 gi|254715552|ref|ZP_05177363.1| hypothetical protein BcetM_03702 [Brucella ceti M13/05/1]
 gi|261217289|ref|ZP_05931570.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261320160|ref|ZP_05959357.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
 gi|260922378|gb|EEX88946.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261292850|gb|EEX96346.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
          Length = 257

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 71/246 (28%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L +   D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANDYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYSRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|237802193|ref|ZP_04590654.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025050|gb|EGI05106.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 254

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 84/256 (32%), Gaps = 27/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MYK   +     +           S+L +      +K GI      F    A+G   GFD
Sbjct: 3   MYKKILMIAAATLAFS-------GSVLAE-----KMKMGIEGAYPPFNNKDASGQVVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   AL + +  +    + +  +      AL +++ D L  +   T  RE    + F  
Sbjct: 51  REIGDALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITKEREKM--VDFTT 105

Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             Y +   F+  K   I       +   L+G S+  Q  T     L D            
Sbjct: 106 PYYSNKLQFVAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLASTWLEDTLG----IMDAK 161

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  E       A R DA   D  A Y    +    +       ++    +  A+ +G+
Sbjct: 162 LYDTQENAFFDLVAGRMDAMLADKYASYEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGN 221

Query: 235 TEWYNIVSWTHYAMVT 250
            E    ++     ++ 
Sbjct: 222 DELRERLNVALKEIIA 237


>gi|182418197|ref|ZP_02949497.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           butyricum 5521]
 gi|237666247|ref|ZP_04526234.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182378015|gb|EDT75555.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           butyricum 5521]
 gi|237658337|gb|EEP55890.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 272

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 16/241 (6%)

Query: 12  LIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRAL 67
           + ++   S        L  IK+ G L  G +     +     V    + KGFD+D  +A+
Sbjct: 20  ISMVGCGSSGDENKTALDKIKESGKLVVGTSADYPPYEFHATVDGKDEIKGFDIDIAQAV 79

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +      ++   ++     +ALQ  ++D++      T  R       F  I Y    
Sbjct: 80  ADDLGVK---LEIKDMDFDGLLVALQGDKVDMVFAGMTPTEER--KQNADFSDIYYTATH 134

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            FI+   +   + S   L    I VQ G+  E    D F A N         +V ++   
Sbjct: 135 RFILRSGEEGSVKSFDDLKDKKIGVQKGSIQEGIAKDNFDAAN----IKSLAKVTDLVLD 190

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + ++ DA   +          N+             +   A A+ +G TE    V+ T 
Sbjct: 191 LKNNKVDAILIEDGVAKINCDKNE-GIAMSDFVVTDEEGGSAIALKKGSTELQTEVNNTI 249

Query: 246 Y 246
            
Sbjct: 250 N 250


>gi|22126721|ref|NP_670144.1| arginine 3rd transport system periplasmic binding protein [Yersinia
           pestis KIM 10]
 gi|45441083|ref|NP_992622.1| arginine 3rd transport system periplasmic binding protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|229895773|ref|ZP_04510943.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis Pestoides A]
 gi|229903223|ref|ZP_04518336.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis Nepal516]
 gi|21959741|gb|AAM86395.1|AE013887_2 arginine 3rd transport system periplasmic binding protein [Yersinia
           pestis KIM 10]
 gi|45435942|gb|AAS61499.1| arginine 3rd transport system periplasmic binding protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|229678993|gb|EEO75096.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis Nepal516]
 gi|229700696|gb|EEO88725.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis Pestoides A]
 gi|320015810|gb|ADV99381.1| ABC transporter, periplasmic arginine-bindingprotein artI precursor
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 252

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L  + F++ +              L+   +     F  + AN +  GFD
Sbjct: 10  MKKLLLATL--LSGMAFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 57  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S+ + L G  I ++ GTT +  L D           + ++  +
Sbjct: 112 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVSYDSYQ 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +    
Sbjct: 167 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALL 226

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 227 TKLNKAIDAV 236


>gi|256015452|ref|YP_003105461.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|255998112|gb|ACU49799.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
          Length = 257

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|152976560|ref|YP_001376077.1| extracellular solute-binding protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152025312|gb|ABS23082.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus
           NVH 391-98]
          Length = 261

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 12/263 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKAN--GDW 56
           M K   +SI  ++IL   S  +          K +  L  G +     +  V+A+   + 
Sbjct: 1   MKKVLSISIALILILSMFSACSKGEEKEVGADKNKKVLIMGTSADYKPYEYVEASKSDEI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  + +   +  +   ++   ++      +L S ++D +      T  R+     
Sbjct: 61  IGFDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERKE--NA 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  I +      +  K   I S+  L G  + VQ G+  E    ++ K  ++K      
Sbjct: 116 DFTDIYFVAKNMIVSKKDSNIKSLQDLKGKKVGVQTGSIQEEKANEFKKQVDLKAEGR-- 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +RV EI    +A R DA   + +      L   +  + + + +   +   A A+ +   +
Sbjct: 174 DRVPEIVQEIKAGRFDAAILEDTI-AKHYLEKVKGLQGIEIQEAPEEVGAAIALPKNSDK 232

Query: 237 WYNIVSWTHYAMVTAEELGITQK 259
                          E   + +K
Sbjct: 233 TAEFNKVIQKMKENGEMNKLVKK 255


>gi|86146431|ref|ZP_01064754.1| ABC-type amino acid transport, signal transduction
           system,periplasmic component/domain [Vibrio sp. MED222]
 gi|218709049|ref|YP_002416670.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           splendidus LGP32]
 gi|85835694|gb|EAQ53829.1| ABC-type amino acid transport, signal transduction
           system,periplasmic component/domain [Vibrio sp. MED222]
 gi|218322068|emb|CAV18138.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Vibrio splendidus LGP32]
          Length = 256

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 14/220 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ GI      F+  +A+G  KGFDVD   AL + +     K + +  +      
Sbjct: 22  KEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVKCKIVAQDWDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           +L +++ D +      T  R+    + F          FI  K  G+ +   LSG  I V
Sbjct: 79  SLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-NFDDLSGQKIAV 135

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  TT +  L D +         + +   +E        R  A  GD SAL    L    
Sbjct: 136 QRATTHDKYLTDNY---GDTVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVLNKAG 192

Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
             ++  +   ++           A+ + D +    +    
Sbjct: 193 GEDYEFVGPSLTDPKWFGEGFGIALRKQDKDLTKQLDAAI 232


>gi|254239636|ref|ZP_04932958.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192]
 gi|126193014|gb|EAZ57077.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192]
          Length = 273

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 79/232 (34%), Gaps = 6/232 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L DI + G L+C +           A  +  GFDVD+C  L+ A+    
Sbjct: 17  CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       +R  AL S + D++  +T  TL R  ++G+      +   +  +  +  
Sbjct: 77  EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194
            I+S   L G  +   AGT   L L    KA    K     ++   +   A      DA 
Sbjct: 132 SIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +   +   +       +          +A    + +    N ++    
Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243


>gi|330874081|gb|EGH08230.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 261

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 10/233 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +    +A+ L D+  RG LK  +      F  V  +   +G D+D  + L+  +    
Sbjct: 17  MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADRL---K 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++  P+N+  R   L + ++D++  +      RE    + F                 
Sbjct: 74  VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            +  ++ L G +I V  G   ++ L+              FE      AAY A + D   
Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                + A  ++   P     L   +  SP+   + +G  E  + V+    A 
Sbjct: 189 SGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLSKVNEILNAA 239


>gi|159186274|ref|NP_355978.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159141408|gb|AAK88763.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 267

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 10/230 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +I  RG +K G+ TG      V   G+  G+DVD    + S +      ++ +PL  
Sbjct: 31  SLSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVDVANLIGSYL---SLPVELVPLTP 87

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R  ALQ+ ++D L      T  R  +  + F           I  K +   ++  L G
Sbjct: 88  PARIPALQTGKVDFLVATLAPTGERAKT--VMFTQPYSAFNMDIISGKDQKFENLDSLKG 145

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + V  G++ E  L    KA+      +V+E       A  A + DA      +     
Sbjct: 146 KRVSVNRGSSQETALR---KANVEGLEIVVYEDDSTSAQALLAGQVDAVAL--PSTVGEA 200

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +   RP   + +     +   + A    D E    ++ + Y M  + +L 
Sbjct: 201 IIKQRPEAGLQVGFTFFQQGNSMATKIEDFELRQWLNTSIYLMKMSGDLD 250


>gi|313496645|gb|ADR58011.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida BIRD-1]
          Length = 250

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 22/252 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    +++   + +              L+ GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAATLVMTANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTEP 107

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K     +    L G  I  Q  T     L D    +       +++  E
Sbjct: 108 YYSNKLQFIAPKNVDFKTDKASLKGKVIGTQRATLAGTYLED----NYPDVDVKLYDTQE 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R D    D    Y    + D  +       ++    +  A+ +GDT+  + 
Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 224 LNKAL-AEIKAD 234


>gi|311031432|ref|ZP_07709522.1| amino acid ABC transporter ATP-binding protein [Bacillus sp. m3-13]
          Length = 259

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 82/247 (33%), Gaps = 17/247 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   +  L L+     +     +     ++ K        +     F+    +G+  G
Sbjct: 1   MKKRVLLVTLFLLSTILAACGGKTTTSEGYELVKEDKFIFASSGEFAPFSVTDGSGNMTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++   A+++ +  +P + +Y           +++ + D    +   T  R     + F
Sbjct: 61  FDIEVGEAIAAELGLEPEQEKY---TFASIVEGVKNGRFDAAVASHTITEER--LKEVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y+ G    +     I ++  L G  I V  G+T    +        +  + + ++ 
Sbjct: 116 STPYYYSGAQIFVRPDSEIQTMDDLEGVEIAVSRGSTYADLVE------GVSDNIVNYDS 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 A    R DA   D       +       E     +++ +S  A A+ +G+    
Sbjct: 170 DVVALEALNNGRHDAVVTD---FVTGREAIGSGMELEA-RELLDRSEQAVAVAKGNEALL 225

Query: 239 NIVSWTH 245
             ++   
Sbjct: 226 EAINEAL 232


>gi|308070242|ref|YP_003871847.1| Probable amino-acid ABC transporter extracellular binding protein
           yckK precursor [Paenibacillus polymyxa E681]
 gi|305859521|gb|ADM71309.1| Probable amino-acid ABC transporter extracellular binding protein
           yckK precursor [Paenibacillus polymyxa E681]
          Length = 286

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 74/272 (27%), Gaps = 39/272 (14%)

Query: 1   MYK-DFFVSILCLIILFFTSFS-------------------------TNASILGDIKKRG 34
           M K  F   +L ++ L  ++                           T  + L  +K  G
Sbjct: 4   MKKFSFLPIVLIVMALLVSACGNNDKGASTNNASTGDNGSNNGKADTTATATLESVKASG 63

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G       F    A G   GFDVD    +S  +   P    ++       F  L S
Sbjct: 64  KLRIGTEGTYAPFTYHDAAGKLTGFDVDIATEVSKRLGVQPE---FIETQWDGIFAGLNS 120

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAG 153
           K+ D +      T  R+      F            +      I   + L G        
Sbjct: 121 KRFDTVFNEVSITDERK--QKYDFSDPYIVSKAVLIVSEDNTDIQKFADLKGKKAG---- 174

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            +    L    K++      +  E   +      + R DA   D  +   LK        
Sbjct: 175 QSLTSNLTQIAKSNG--AEIVATEGFNQAIDLLTSKRVDATVNDGLSYLDLKKQKPDAP- 231

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              + +    S  A    +G  +    V+   
Sbjct: 232 IKKVDESSDASHSAAVFNKGSEDLIKEVNKAL 263


>gi|170078777|ref|YP_001735415.1| glutamine-binding protein [Synechococcus sp. PCC 7002]
 gi|169886446|gb|ACB00160.1| glutamine-binding protein [Synechococcus sp. PCC 7002]
          Length = 260

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 96/246 (39%), Gaps = 12/246 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             +     F ++  T A+ L  I+ RG L+  +   +         G+ +G +++    L
Sbjct: 11  LAIAASFFFGSTSLTQATPLETIQARGILRVAVKENVRPLGFRDEAGNLQGLEIEIAHQL 70

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +  D   ++ +PL  +ER  A+ + ++D++         R+    + F P  Y DG 
Sbjct: 71  AAELLGDRQAVELIPLTNQERLDAVLTGEVDLVIAQLGLNASRQRL--VNFSPYYYLDGI 128

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           GF+   +  I S++Q+S   I V  G+     +  YF         +     +E      
Sbjct: 129 GFVTRDR-EIQSLNQISDQRIVVLEGSEAIAAVRAYFP----GVTLVGVNSYQEALNYLE 183

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWTH 245
            +    + GD S L           E+ +LP  ++ +PLA A  +G         +  T 
Sbjct: 184 NNETAFFAGDHSVLTGWVQEYP---EYQLLPAWLTGNPLAIAFPKGRQHQSLSQALQKTV 240

Query: 246 YAMVTA 251
                +
Sbjct: 241 TDWQNS 246


>gi|227834107|ref|YP_002835814.1| putative extracellular solute-binding protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262183407|ref|ZP_06042828.1| putative extracellular solute-binding protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227455123|gb|ACP33876.1| putative extracellular solute-binding protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 363

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 10/210 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI  RG L  G++      +    A+G+ +GF+VD  R ++  IF DP+K+ +  + A E
Sbjct: 92  DILARGRLIVGVDRSNNLLSYRDTASGEVRGFEVDIAREIARDIFGDPNKVDFRFVEASE 151

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL  + +DI+ R    +  R+    ++F           ++ K  G+ S++  +G +
Sbjct: 152 RARALNDRTVDIVIRTMTISPSRQR--EVSFSIPYMQTDARLLVLKNSGVESIADTAGMT 209

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C   G+T    +  +  A       +      +   A +  + D    D + L  +   
Sbjct: 210 LCATKGSTMVDAIRTHAPA----SDILETRAWGDCLMALQLGQADGIVVDDALLSGMLAQ 265

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                   I+   +       A+ + D  +
Sbjct: 266 ---DRYTEIVGGPLESQSYGVAVRKPDGSY 292


>gi|311742426|ref|ZP_07716235.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Aeromicrobium marinum DSM 15272]
 gi|311314054|gb|EFQ83962.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Aeromicrobium marinum DSM 15272]
          Length = 293

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 9/227 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
             + + ++ ++G +K G+     G     A  D   GFD +  + L+S +  D   I+++
Sbjct: 44  AGTRMAELNEQGTVKIGVKFDQPGIGFKGATQDVPSGFDPEMGKILASKLGIDSQDIEWV 103

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
              +  R   L+S  +D +  +   T  R   +G A  P         +      IS   
Sbjct: 104 ETISSNREPFLESGTVDFVIASYSITDDRRTIVGQA-GPYYVTGQALMVAADDDSISGPE 162

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  +C   G+T+  T+ + + A      P  F+   E          DA T D + L
Sbjct: 163 DLDGKIVCSVTGSTSIKTVEEEYGA-----QPAPFDTYSECTDQLLNGSVDAVTTDAAIL 217

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                  + P +  ++ D  S+            E    ++    A 
Sbjct: 218 LGYAA--ENPDQLKVVGDPFSEERYGIGYGLDHPELCEFINEVLEAA 262


>gi|186472290|ref|YP_001859632.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184194622|gb|ACC72586.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 259

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +   L +    + + ++           L+ GI      F    A+G  +GFD
Sbjct: 1   MNLKLSFAAAVLAMTAGAACAQSSDT---------LRFGIEAAYPPFESKSASGQLEGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +     K  ++         ALQ+++ D+++   + T  R+ S+     P
Sbjct: 52  VDVGNAVCAKL---KMKCVWVENAFDGLIPALQARKFDVINSAMNITSKRKESIAFT-PP 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I          H       V  L G  + V  G++ E  L  ++         + ++  +
Sbjct: 108 IYIVPIVMIAKHGSGLKPDVKNLQGKHVGVLQGSSQEDFLKAHWANAG--VQVVSYQDQD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235
           ++ A   A R DA   +        L     +   I+ + +             + +GD 
Sbjct: 166 QVYADLVAGRLDAAVQEAQTASDGFLNKPAGAGFEIVGEPLKDPSTLGEGTGFGLRKGDK 225

Query: 236 EWYNIVSWTH 245
                V    
Sbjct: 226 ALQAKVDGAL 235


>gi|23500424|ref|NP_699864.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|148558719|ref|YP_001257649.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161620736|ref|YP_001594622.1| extracellular solute-binding protein [Brucella canis ATCC 23365]
 gi|163844811|ref|YP_001622466.1| hypothetical protein BSUIS_B0666 [Brucella suis ATCC 23445]
 gi|225629163|ref|ZP_03787196.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti str. Cudo]
 gi|254699906|ref|ZP_05161734.1| hypothetical protein Bsuib55_03472 [Brucella suis bv. 5 str. 513]
 gi|254703028|ref|ZP_05164856.1| hypothetical protein Bsuib36_03642 [Brucella suis bv. 3 str. 686]
 gi|254711058|ref|ZP_05172869.1| hypothetical protein BpinB_12527 [Brucella pinnipedialis B2/94]
 gi|256029439|ref|ZP_05443053.1| hypothetical protein BpinM2_02090 [Brucella pinnipedialis
           M292/94/1]
 gi|256157636|ref|ZP_05455554.1| hypothetical protein BcetM4_02115 [Brucella ceti M490/95/1]
 gi|256253389|ref|ZP_05458925.1| hypothetical protein BcetB_03642 [Brucella ceti B1/94]
 gi|260167468|ref|ZP_05754279.1| hypothetical protein BruF5_03607 [Brucella sp. F5/99]
 gi|260568043|ref|ZP_05838512.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str.
           40]
 gi|261220511|ref|ZP_05934792.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ceti B1/94]
 gi|261318649|ref|ZP_05957846.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261750382|ref|ZP_05994091.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261753639|ref|ZP_05997348.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|261756881|ref|ZP_06000590.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99]
 gi|265986448|ref|ZP_06099005.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella pinnipedialis M292/94/1]
 gi|265996141|ref|ZP_06108698.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ceti M490/95/1]
 gi|23464047|gb|AAN33869.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|148370004|gb|ABQ62876.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161337547|gb|ABX63851.1| extracellular solute-binding protein family 3 [Brucella canis ATCC
           23365]
 gi|163675534|gb|ABY39644.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225615659|gb|EEH12708.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti str. Cudo]
 gi|260154708|gb|EEW89789.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str.
           40]
 gi|260919095|gb|EEX85748.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ceti B1/94]
 gi|261297872|gb|EEY01369.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261736865|gb|EEY24861.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99]
 gi|261740135|gb|EEY28061.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261743392|gb|EEY31318.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|262550438|gb|EEZ06599.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ceti M490/95/1]
 gi|264658645|gb|EEZ28906.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella pinnipedialis M292/94/1]
          Length = 257

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|326333229|ref|ZP_08199476.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1]
 gi|325948873|gb|EGD40966.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1]
          Length = 272

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 8/230 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K GI     G    +A+G + GFDVD    ++  +  +  +I+++   +  R   L+ 
Sbjct: 36  KIKIGIKFDQPGLGFKEADGSYSGFDVDMATYIAEGLGYEGDQIEFVEAVSANRETFLKD 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
             +D++      T  R+    + F    Y  GQ  ++       +    L G  +C   G
Sbjct: 96  GTVDMILATYSITDERKA--EVDFAGPYYIAGQDLLVAADNTDITGPDTLDGKKLCSVTG 153

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   + D +           F+   +   A    + DA T D   L         P +
Sbjct: 154 STSAQKVKDEYAK---GVQLQEFDTYSKCVTAIEGGQLDAMTTDDIILAGYAQQ--DPGK 208

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
             I+    S+      + +G  +   I      +            N+ +
Sbjct: 209 FKIVGAPFSEENYGVGLPKGSKDRDKINDLIEQSFEDGAWEKAFNDNLGE 258


>gi|261339174|ref|ZP_05967032.1| hypothetical protein ENTCAN_05398 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319019|gb|EFC57957.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Enterobacter cancerogenus ATCC 35316]
 gi|295096440|emb|CBK85530.1| L-arginine-binding protein [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 243

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 84/247 (34%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALLASVSLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +   +          +L+ ++ID +    D T  RE    + F  
Sbjct: 48  VDLANALCKEI---DATCTFSNQAFDSLIPSLKFRRIDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K    +SV  L G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFIGQKG-KYASVDLLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      ND+       +       + L  A+ QG+TE  
Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 QKFNAAL 224


>gi|222151827|ref|YP_002560987.1| glutamine-binding periplasmic protein homolog [Macrococcus
           caseolyticus JCSC5402]
 gi|222120956|dbj|BAH18291.1| glutamine-binding periplasmic protein homolog [Macrococcus
           caseolyticus JCSC5402]
          Length = 483

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 96/273 (35%), Gaps = 23/273 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVD 62
            V I+ L +  F++  +       IKK G L+ G++     +           + G D++
Sbjct: 11  LVFIVLLSVFPFSTARSATDQYDVIKKNGVLRVGLSADYAPYEFEKTKNGKRVYAGIDIE 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + L+  +  +   ++ + +       AL++ +ID+++     T  R+    + F    
Sbjct: 71  LSKKLAKDLGVE---LKIVNMQFDSLLGALKTGKIDMIASGMSPTPERKK--EVDFTDYY 125

Query: 123 YFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               Q  I+ K  K  + S+   +G +I VQ  TT E                    RV 
Sbjct: 126 MHVQQRMIIQKKDKDKLKSIEDFTGKAIGVQKQTTQEELAKKEIPEA----EVQSLTRVP 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EI  +    + D    +     A    N        L    ++   A AI +   +  + 
Sbjct: 182 EIIMSLNTGKIDGVILEGPVGEAYLSQNKT-LTFSELQFADAEKGTAIAIPKNSPKLLSE 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           ++             +  KN+ Q  KD  N ++
Sbjct: 241 LNKHI--------KEVNDKNLIQDYKDKANQEM 265


>gi|300172544|ref|YP_003771709.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811]
 gi|299886922|emb|CBL90890.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 288

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 19/252 (7%)

Query: 4   DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
              V+++ L +++ T+ +     +   L  ++K G +  G+      F  +    G  +G
Sbjct: 15  IVLVAVIVLGLMWATATANRNAEHQDTLARVEKLGRIVWGVKADTRLFGLMDTKTGISQG 74

Query: 59  FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           FD+D  RAL+  I      P   +++P++   +   L++  ID        T  RE    
Sbjct: 75  FDIDIARALTVQISKQTGVPMSAEFVPVSTASKMQLLKNTNIDGSVSTMTITPEREKI-- 132

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    +  GQ  ++ K  GI+S+  ++    +I V  GTT     A +          
Sbjct: 133 IDFTNQYFDAGQSILVKKDSGINSIKDMNSSKYTIIVVVGTTAATETAKFAPKAK----L 188

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +       A ++ +  A + D + LY     N    ++ I     +  P   A    
Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---DYHIAGGTFTHGPYGIAFDNN 245

Query: 234 DTEWYNIVSWTH 245
                   +   
Sbjct: 246 QKPMIKETNAAL 257


>gi|152985442|ref|YP_001349486.1| putative ABC transporter binding protein subunit [Pseudomonas
           aeruginosa PA7]
 gi|150960600|gb|ABR82625.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PA7]
          Length = 273

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 6/232 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L DI + G L+C +           A  +  GFDVD+C  L+ A+    
Sbjct: 17  CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       +R  AL S + D++  +T  TL R  ++G+      +   +  +  +  
Sbjct: 77  EIVE---TPFPDRIPALVSGRADVIVASTSDTLERARTIGM--SIPYFAFVKVVLTREDT 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194
           GI+S + L G  +   AGT   L L    KA    K     ++   +   A      DA 
Sbjct: 132 GIASYADLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +   +   +       +          +A    + +    N ++    
Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243


>gi|47564801|ref|ZP_00235845.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bacillus cereus G9241]
 gi|229154560|ref|ZP_04282677.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC
           4342]
 gi|47558174|gb|EAL16498.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bacillus cereus G9241]
 gi|228628958|gb|EEK85668.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC
           4342]
          Length = 265

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    +S  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVSKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +        R D +T +        L   + ++  I+      S       
Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|324112238|gb|EGC06216.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
          Length = 246

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 28/260 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V +L    L F + + N            L  G +     +  V A+    GFD
Sbjct: 1   MKQKLLVMLLA--GLSFQATAANTKT---------LHFGTSATYAPYEFVDADNQIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+   +    ++ Q+   +       L+ K+ D +    D T  RE    ++F  
Sbjct: 50  IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKRE--QQVSFSQ 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      ++ +K   +S ++L G  I ++ GTT +  L D  K        + ++   
Sbjct: 105 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQDKQKE----ITAVAYDSYL 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPL----APAIIQGDT 235
                 +++R D   GD   + A+        ++ I+ +              A+ +G+ 
Sbjct: 161 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDERAKDPEYYGKGLGIAVRKGND 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                ++     +  + E  
Sbjct: 218 ALLAEINAALDKVKASPEYA 237


>gi|290473512|ref|YP_003466381.1| putative cysteine ABC transporter periplasmic binding protein
           [Xenorhabdus bovienii SS-2004]
 gi|289172814|emb|CBJ79585.1| putative cysteine transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus bovienii SS-2004]
          Length = 257

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 75/262 (28%), Gaps = 13/262 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  +I L  T  +   S L +I+  G  + G       F+   A+G   GFD
Sbjct: 1   MNIILNILLATIIQLGITQLAYAKSTLDNIQSTGVFRIGTEGAYAPFSYHDASGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +   P    ++          L + + D +      T  RE     +F  
Sbjct: 61  VEIGREIALRMKVKPE---FIEGKWDGLIGGLDAGRSDAVMNQIAITPEREK--KYSFSL 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K    I +   L G +    +  T     A   + +      I     
Sbjct: 116 PYVISEAVLITRKDNNDIKTFRDLKGRT----SSHTLTNNFAQIARHYG--AEIIGTNGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R DA   D  +    K         ++  D  +    A  + + D E   
Sbjct: 170 SQEVELVSTGRADATINDKLSYLDYKKHRPDAPVKIVAADTNAAQ-TAVLLRKSDPELKA 228

Query: 240 IVSWTHYAMVTAEELGITQKNI 261
            V      +           N 
Sbjct: 229 AVDKAITEIKNDGTYQQIWDNY 250


>gi|255322519|ref|ZP_05363664.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter showae RM3277]
 gi|255300427|gb|EET79699.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter showae RM3277]
          Length = 273

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 79/243 (32%), Gaps = 22/243 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTN--ASILGDIKK-------RGFLKCGINTGLVGFAEVKA 52
           +K  FV +   ++L     S+N  AS    +K        +  ++ G +     F  +  
Sbjct: 14  FKKLFVFVAAALMLSGCGQSSNEKASKDAAVKNEAAPVAVQQTIRVGSSADYPPFEYIDE 73

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GF++D   A+   I           ++      AL++ +ID        T  R  
Sbjct: 74  HNKIVGFEIDMIEAVGKKIGVK---FDIQNMSFDGLIPALKTGKIDAALSGMSATEERRK 130

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F    YF    FI  K       + ++  ++ ++  +    TL +          
Sbjct: 131 --SVDFTKPYYFSDNLFIRKKG------TDVNATNMHLKKISAQIGTLQESAAKSICGDL 182

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E V     + +A + D    D    Y     N    E + LPD       A A  +
Sbjct: 183 SVPAETVAAAILSLKAGKIDVVLTDSPIGYEYLKQNSDLEEFLKLPD--GTEGFAVAFDK 240

Query: 233 GDT 235
              
Sbjct: 241 DKH 243


>gi|281177998|dbj|BAI54328.1| arginine ABC transporter substrate binding component [Escherichia
           coli SE15]
          Length = 243

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LQQKFNTAL 224


>gi|86741119|ref|YP_481519.1| extracellular solute-binding protein [Frankia sp. CcI3]
 gi|86567981|gb|ABD11790.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Frankia sp. CcI3]
          Length = 343

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 79/223 (35%), Gaps = 8/223 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            ++L  I++RG+L  G+   +  F  +    G ++GFDV+    +   IF     +++  
Sbjct: 94  GTVLETIERRGYLIAGVLADVPPFGSISPFTGQFEGFDVEIANLVGRRIFGADGHVRFRA 153

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +   ER   L+   +D++         R     + F  + Y + Q  ++ +      +  
Sbjct: 154 VTYAERIPVLRDGAVDVVVATMTTNCERRAL--VDFSAVYYNETQRVLVPRDSPYQGMDD 211

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  +C  AG           +    +        + +     +A   DA     + L 
Sbjct: 212 LGGRRVCTAAGAAAGAAAT--IRRAPSRPVLRTVPNIADCLVLLQAGEVDAVMTTTAILN 269

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   + R     ++   +S  P A A+     E    V+   
Sbjct: 270 GMAAQDPR---LYVVGPALSDEPDAVAVSLDHPELTRFVNGVL 309


>gi|320331821|gb|EFW87759.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 261

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 10/244 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +    +A+ L D+  RG LK  +      F  V  +   +G D+D  + L+  +    
Sbjct: 17  MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++  P+N+  R   L + ++D++  +      RE    + F                 
Sbjct: 74  VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            +  ++ L G +I V  G   ++ L+              FE      AAY A + D   
Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                + A  ++   P     L   +  SP+   + +G  E    V     A      L 
Sbjct: 189 SGNVVMAA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246

Query: 256 ITQK 259
              +
Sbjct: 247 KASQ 250


>gi|296103996|ref|YP_003614142.1| histidine/lysine/arginine/ornithine transport system
           substrate-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058455|gb|ADF63193.1| histidine/lysine/arginine/ornithine transport system
           substrate-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 93/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++    +  + A++         ++ G +     F+   A GD+ GFD
Sbjct: 1   MKKTVL--ALSLLVGLSAAAGSYAALPQ------TVRIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRI---AVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E      ++   +    + ++  
Sbjct: 108 KLYAADSRLIAAKGSPIQPTIDSLKGKHVGVLQGSTQEGYANANWREKGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A   A          ++++K   + +V
Sbjct: 226 TELKA-------AFDKAFAELRKDGTYDKLAKKYFDFNV 257


>gi|157369898|ref|YP_001477887.1| cationic amino acid ABC transporter periplasmic binding protein
           [Serratia proteamaculans 568]
 gi|157321662|gb|ABV40759.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Serratia proteamaculans 568]
          Length = 243

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 83/249 (33%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I +  ++                ++         F  + A    +GFD
Sbjct: 1   MKKLIIAAVLAGISVSASAAE-------------TIRFATEASYPPFEFIDAGNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    ++  +          +L+ K+ D +    D T  RE    + F  
Sbjct: 48  VDLANALCKEM---QAECTFTNQAFDSLIPSLKFKRFDAVMAGMDITPEREK--QVLFTK 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++ V+ L G  + VQ GTT +  L D           + ++  +
Sbjct: 103 PYYDNSALFVAQKG-KVADVAALKGKKVGVQNGTTHQKYLTDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD + +          +   +   +  K      L  A+ Q +T+
Sbjct: 158 NAILDLKNGRVDAVFGDTAVVNEWLKQ--NAALAAVGDKVTDKDYFGTGLGIAVRQKNTD 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LQGKFNAAL 224


>gi|238792442|ref|ZP_04636076.1| Arginine-binding periplasmic protein 2 [Yersinia intermedia ATCC
           29909]
 gi|238728368|gb|EEQ19888.1| Arginine-binding periplasmic protein 2 [Yersinia intermedia ATCC
           29909]
          Length = 243

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L  + F++ +              ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATL--LSGMVFSATAAE-----------TIRFAASATYPPFESMDANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +K  +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EAKCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +T   
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNKAIDAV 227


>gi|325062203|gb|ADY65893.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 267

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 10/230 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +I  RG +K G+ TG      V   G+  G+DVD    + S +      ++ +PL  
Sbjct: 31  SLSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVDVANLIGSYL---SLPVELVPLTP 87

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R  ALQ+ ++D L      T  R  +  + F           I  K +   ++  L G
Sbjct: 88  PARIPALQTGKVDFLVATLAPTGERAKT--VMFTQPYSAFNMDIISGKDQKFENLDSLKG 145

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + V  G++ E  L    KA+      +V+E       A  A + DA     +      
Sbjct: 146 KRVSVNRGSSQETALR---KANVEGLEIVVYEDDSTSAQALLAGQVDAVALPST--VGEA 200

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +   RP   + +     +   + A    D E    ++ + Y M  + +L 
Sbjct: 201 IIKQRPEAGLQVGFTFFQQGNSMATKIEDFELRQWLNTSIYLMKMSGDLD 250


>gi|282896969|ref|ZP_06304973.1| extracellular solute-binding protein, family 3 [Raphidiopsis
           brookii D9]
 gi|281198142|gb|EFA73034.1| extracellular solute-binding protein, family 3 [Raphidiopsis
           brookii D9]
          Length = 274

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 93/250 (37%), Gaps = 15/250 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              +    ++ L  T  ++ A+ + +I++RG++   +   +   A     G+ +G ++D 
Sbjct: 19  TILLFSWVVLPLPGTINTSLAATMQEIEERGYITIAVKDNIPPLAFRDKQGNLQGLEIDL 78

Query: 64  CRALSSAIFDD------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            + L+  +  D        ++++ P+   ER   + + ++D+       T  R   + L+
Sbjct: 79  AKRLTRDLLGDSPSSRVKLQVKFQPVTNMERLPVVFNHRVDLAIARVTATPSRSRIVSLS 138

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                       I+ K   I   S L+   ICV   ++T   +         +   +   
Sbjct: 139 IPYYYDGTA---IVTKNLTIQKPSDLNKRRICVLNYSSTIPHVRYAIP----QGELVGVN 191

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDT 235
              E        + DA   D +        +++ S++ IL D +S  PL+  + +     
Sbjct: 192 SYLEAKKLLDNGQVDACAADSTVFQGWIEADNQYSQYKILLDKLSVEPLSIVMPKGLQYD 251

Query: 236 EWYNIVSWTH 245
           E    V+   
Sbjct: 252 ELRTRVNDLI 261


>gi|295675886|ref|YP_003604410.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1002]
 gi|295435729|gb|ADG14899.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1002]
          Length = 258

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   + L ++   + +         K+   ++ G++     F     NGD  GFD
Sbjct: 1   MKK--FALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAPNGDIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  RAL + +     K  ++  +      AL++++ D++  +   T  R     + F  
Sbjct: 50  ADLTRALCAKM---NVKCVWVTQDLDGLIPALKARKFDVIISSLSVTDKR--REQIDFSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I       + +   L    + V+ G+T E     +++        + ++  
Sbjct: 105 KMFDAPARMIAKTGSPLLPTPESLKRKRVGVEQGSTQEQYAKVWWEPKG--VVVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234
           +++ A   + R DA   D     A  L   R        P++          A  + + D
Sbjct: 163 DQVYADLASGRLDAALQDEVQADAGFLKTPRGKGFSWAGPEVKDPKTIGEGTAIGLRKAD 222

Query: 235 TEWYNIVSWTH 245
            +     +   
Sbjct: 223 ADLKAKFNQAL 233


>gi|228963461|ref|ZP_04124619.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228796232|gb|EEM43682.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 264

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M +     +  + +         +         G    +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDLEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + + + 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDNKKM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|282862287|ref|ZP_06271349.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
 gi|282562626|gb|EFB68166.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
          Length = 307

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 10/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++      K+RG L  G             A  +  GFD++  + +++ +     +I++ 
Sbjct: 58  DSPAFKKAKERGKLIIGAKADQPYLGFEDQATKERSGFDIEIAKMIAADLGFSDKQIEWK 117

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140
            +++  R  A+   Q+D L         R+  +G  F    Y  G   ++ K    I+  
Sbjct: 118 TVDSGIRETAIAKGQVDYLVGTYTINDERKKQVG--FAGPYYKAGADLLVRKDESSITGK 175

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  +C   G+T    +             +   +  +        + DA T D S 
Sbjct: 176 DAVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLLTKQVDAVTTDDSI 231

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L           +  ++    ++ P    + + D    + ++ + 
Sbjct: 232 LKGYAAA--NSGKLKVVGQPFTEEPYGVGLNKDDKALRDAINTSL 274


>gi|227431443|ref|ZP_03913492.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352809|gb|EEJ42986.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 288

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 20/253 (7%)

Query: 4   DFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
              ++ + ++ L + + +      +   L  ++K G +  G+ +    F  +    G  K
Sbjct: 14  TIVLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTKTGVSK 73

Query: 58  GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           GFDVD  +AL+  I      P   +++P+++  +   L++  ID        T   E   
Sbjct: 74  GFDVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITP--EREK 131

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYH 172
            + F    +  GQ  ++ K  GI S+  ++     I V  GTT       +         
Sbjct: 132 NIDFTNQYFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTAAEETKKFAPKAK---- 187

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +       A +A +  A + D + LY      + P ++ I+    +  P   A   
Sbjct: 188 LLAVQDYATGMQALKAGQGQAMSTDNAILYGFAT--ENP-DYQIVGGTFTHGPYGIAFDN 244

Query: 233 GDTEWYNIVSWTH 245
                    +   
Sbjct: 245 NQGPMVRETNKAL 257


>gi|317490081|ref|ZP_07948570.1| bacterial extracellular solute-binding protein, family 3
           [Eggerthella sp. 1_3_56FAA]
 gi|316910786|gb|EFV32406.1| bacterial extracellular solute-binding protein, family 3
           [Eggerthella sp. 1_3_56FAA]
          Length = 281

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 14/243 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
           ++L   S   +A         G   L  G + G   +  V  +G + GFD++  +A+   
Sbjct: 25  VMLAGCSGRGDAQSADSAATDGSFTLAVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEK 84

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   ++  P++   +   + S  I+ +                 F     ++ Q  +
Sbjct: 85  MGWE---LKLEPIDWDAKDALIGSGTINCIWNGFTM---ENRENDYTFSEPYMYNEQVVV 138

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAYR 187
           + K      +  L+G ++  Q  +     L D        +                   
Sbjct: 139 VKKDSDAKKLEDLAGKTVLTQVDSAALHVLEDEKGQKALADTFKELQTIGDYNNAFMQLE 198

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           +   DA   D+S   A      +P  +V L  +      A    +GDTE    V+    A
Sbjct: 199 SGMVDAVACDLSI--ASYQMAAKPDTYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALKA 255

Query: 248 MVT 250
           +  
Sbjct: 256 LDE 258


>gi|300868858|ref|ZP_07113464.1| putative amino acid ABC transporter,substrate-binding protein
           [Oscillatoria sp. PCC 6506]
 gi|300333075|emb|CBN58656.1| putative amino acid ABC transporter,substrate-binding protein
           [Oscillatoria sp. PCC 6506]
          Length = 285

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 10/232 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            +      S +   S L  I   G ++  +      F  V  +   +G+D+D  + L+ +
Sbjct: 35  AVAAAPSQSTAPGTSTLDKIISAGKVRIAVPQDSPPFGSVGTDMQPQGYDIDVAKMLAES 94

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     K++ +P+ +  R   LQS ++D++  +   T  R     + F         G  
Sbjct: 95  L---EVKLELVPVTSTNRIPYLQSDRVDLVISSLGATPERAK--SIYFSIAYAPFYSGIY 149

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                  SS + LSG ++ V  G+  ++ LA              FE      +A  A +
Sbjct: 150 GFPGINASSYTDLSGKTVGVTQGSLEDIELAKRAPK---DIQIKRFEDNSTTASALLAGQ 206

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +      +   A K++ D P + +    ++  SP    + +GD +    V+
Sbjct: 207 IELMATGNTI--ANKISKDNPDKKIENKFVMKNSPCYIGVRRGDLDLLQWVN 256


>gi|302337060|ref|YP_003802266.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634245|gb|ADK79672.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 257

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 80/249 (32%), Gaps = 21/249 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +  L L      +     S    I   G      + G   F  +  NGD +
Sbjct: 1   MKRITSVLLMIALLLPAATLFAGGKQESSDNTISFAG------SGGYPPFNFITENGDVE 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD    ++  +      ++Y           L++ + D +  +   T  RE    + 
Sbjct: 55  GFDVDVAAEIAKRMGK---TLEYKTTAWDGIIEGLRAGRYDGILGSMGITEEREKV--VD 109

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y+ G   I+ K  GI   S+LS   +I +  GTT E        A+ +     ++
Sbjct: 110 FSDPYYYSGPQLIVRKDSGIDGPSELSADNTIGLVTGTTFEG------DANALGVKVKLY 163

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E   +        R D    D               +  ++  ++    +  A    D E
Sbjct: 164 EDDNQTLMELLNGRVDGVLTDRIVGLNAIGKLKGGDKLTLVGSVLRTEKMGIAFQADDDE 223

Query: 237 WYNIVSWTH 245
               V+   
Sbjct: 224 LRETVNTIL 232


>gi|82699734|ref|YP_414308.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|260545445|ref|ZP_05821186.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus NCTC 8038]
 gi|82615835|emb|CAJ10837.1| Solute-binding protein/glutamate receptor:Ionotropic glutamate
           receptor:Bacterial extracellular solute-binding protein,
           family 3 [Brucella melitensis biovar Abortus 2308]
 gi|260096852|gb|EEW80727.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus NCTC 8038]
          Length = 282

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 49  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 105

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 106 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 163

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 164 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 219

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 220 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 259


>gi|325479869|gb|EGC82954.1| ABC transporter, permease protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 491

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 94/272 (34%), Gaps = 17/272 (6%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F+  +  + IL  F      AS   DI   G +  G +     +   + + +  G 
Sbjct: 1   MRKKFYRILSTIFILTMFLPVRAFAS--EDIVDDGVIDLGTSADFPPYEYYEGD-EIVGI 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D  +A+   +  +   I+   ++      ++QS +ID  +     T  R+    + F 
Sbjct: 58  DPDIIKAIGDYLGVE---IKLHDMDFNNIIASIQSGKIDGGAAGFTVTEERKK--SVNFT 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  Q  I  K   I+ V  L     I  Q GT  +    D F   N       F +
Sbjct: 113 DSFTKTSQIIIKRKDSDINDVEDLKDKKKIGTQLGTIGDTIAKDDFGEEN----VTSFNK 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           V +   + ++ + DA   D  +      +N    +  I+     +   A AI + + E  
Sbjct: 169 VPDAILSLQSKKIDAVILDEQSAKNFTSSNK---DLEIVDTPYLEEEYAIAISKDNPELL 225

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
             ++    A+  + E+              ++
Sbjct: 226 EKMNEAIAALKESGEIDKIMAKYEASDNANSD 257


>gi|261420862|ref|YP_003254544.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC61]
 gi|319768533|ref|YP_004134034.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC52]
 gi|261377319|gb|ACX80062.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC61]
 gi|317113399|gb|ADU95891.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC52]
          Length = 273

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 11/223 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  +  G +     F  ++  G   GFDVD   A+  A   D        +     F +L
Sbjct: 42  KKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASL 97

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           QSK++D+       T  R+      F    +   Q  ++ +   + +   L G +I VQ 
Sbjct: 98  QSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQN 155

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT +      F       H   FE              DA   D +        N    
Sbjct: 156 ATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKK 212

Query: 213 EHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             VI  P   +         + ++E    V      ++ + + 
Sbjct: 213 LQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 254


>gi|165760995|pdb|2PVU|A Chain A, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
          Length = 239

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 11/223 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  +  G +     F  ++  G   GFDVD   A+  A   D        +     F +L
Sbjct: 4   KKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASL 59

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           QSK++D+       T  R+      F    +   Q  ++ +   + +   L G +I VQ 
Sbjct: 60  QSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQN 117

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT +      F       H   FE              DA   D +        N    
Sbjct: 118 ATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKK 174

Query: 213 EHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             VI  P   +         + ++E    V      ++ + + 
Sbjct: 175 LQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 216


>gi|154148689|ref|YP_001406380.1| polar amino acid ABC uptake transporter substrate binding protein
           [Campylobacter hominis ATCC BAA-381]
 gi|153804698|gb|ABS51705.1| polar amino acid ABC uptake transporter substrate binding protein
           [Campylobacter hominis ATCC BAA-381]
          Length = 271

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 16/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L   +L       NA+ L +I+    L+ G+      F+++K++G+++GF+
Sbjct: 1   MKKFLIFLVLAFSLL-------NANSLNEIRSSKTLRVGVYDAQPPFSQLKSSGEFEGFE 53

Query: 61  VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + F + ++  IF +    +++  ++A +R   LQ   +D++      T  R     + F 
Sbjct: 54  IGFAKEIAKGIFGESGGNVEFKAVSANDRIKFLQDNSVDLVIATLTITDERAKL--VDFS 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    G +  K   I   SQL    I  Q G T E          N+ ++ +  +  
Sbjct: 112 NPYFAVNIGVLTRKDDEIKEFSQLKNKIIITQKGGTAEDYF------KNLGFNVMTCDNG 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                       +A         AL       S  V + ++ +   L   + +G+ E  N
Sbjct: 166 AAGCYKLLKQTPNAIGFADDVTVALAYAVIDKSVEVNVKNLGASDFLGIGVQKGNKELLN 225

Query: 240 IVSWTH 245
           +V+   
Sbjct: 226 VVNDEL 231


>gi|108806624|ref|YP_650540.1| hypothetical protein YPA_0627 [Yersinia pestis Antiqua]
 gi|108812804|ref|YP_648571.1| hypothetical protein YPN_2643 [Yersinia pestis Nepal516]
 gi|145599631|ref|YP_001163707.1| hypothetical protein YPDSF_2359 [Yersinia pestis Pestoides F]
 gi|153949883|ref|YP_001401604.1| arginine ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162419115|ref|YP_001606077.1| arginine ABC transporter periplasmic substrate-binding protein ArtJ
           [Yersinia pestis Angola]
 gi|166009726|ref|ZP_02230624.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211812|ref|ZP_02237847.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167400025|ref|ZP_02305543.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167424057|ref|ZP_02315810.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|270487014|ref|ZP_06204088.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Yersinia pestis KIM D27]
 gi|294503332|ref|YP_003567394.1| hypothetical protein YPZ3_1222 [Yersinia pestis Z176003]
 gi|108776452|gb|ABG18971.1| hypothetical protein YPN_2643 [Yersinia pestis Nepal516]
 gi|108778537|gb|ABG12595.1| hypothetical protein YPA_0627 [Yersinia pestis Antiqua]
 gi|145211327|gb|ABP40734.1| hypothetical protein YPDSF_2359 [Yersinia pestis Pestoides F]
 gi|152961378|gb|ABS48839.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pseudotuberculosis IP 31758]
 gi|162351930|gb|ABX85878.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis Angola]
 gi|165991122|gb|EDR43423.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207583|gb|EDR52063.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167050733|gb|EDR62141.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167056906|gb|EDR66669.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|262361372|gb|ACY58093.1| hypothetical protein YPD4_1185 [Yersinia pestis D106004]
 gi|262365090|gb|ACY61647.1| hypothetical protein YPD8_0960 [Yersinia pestis D182038]
 gi|270335518|gb|EFA46295.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Yersinia pestis KIM D27]
 gi|294353791|gb|ADE64132.1| hypothetical protein YPZ3_1222 [Yersinia pestis Z176003]
          Length = 243

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L  + F++ +              L+   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATL--LSGMAFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S+ + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +    
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 TKLNKAIDAV 227


>gi|189024049|ref|YP_001934817.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus S19]
 gi|189019621|gb|ACD72343.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus S19]
          Length = 262

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 29  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 86  GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 200 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 239


>gi|83593586|ref|YP_427338.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83576500|gb|ABC23051.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 263

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 81/251 (32%), Gaps = 10/251 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K          IL      T A  + D +    ++         F    A G  +GFD
Sbjct: 4   MKKTATALFAAAGILLGGQAVTMALGVADARAE-TIRFATEGAFPPFNFTDAAGKPQGFD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    ++   +  +       L +K+ D +  +   T  R     + F  
Sbjct: 63  IDIANALCAQL---KAECSMVTQDWDGIIPGLLAKKYDAIIASMSITPER--QQSVLFTD 117

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y +   F+  K K    S + L G +I  Q  T +   + D            +++  
Sbjct: 118 AYYNNQFHFVGPKGKDFDLSKAGLKGKAIGAQRATVSSQWIEDTL---GDTVSLNLYDTA 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE      A R D    D    Y    +    +  +    +I    +  A+ + DT    
Sbjct: 175 EEAYLDLEAGRVDLLLNDTYPTYDWLNSPAGQAYELKGESVIKDDVVGIALRKDDTALAA 234

Query: 240 IVSWTHYAMVT 250
            ++     ++ 
Sbjct: 235 KLNGALKEIIA 245


>gi|170701914|ref|ZP_02892840.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria IOP40-10]
 gi|170133176|gb|EDT01578.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria IOP40-10]
          Length = 260

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    L  G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAVA------KDWTTLHFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   + R DA   D        L + R + +  +   +    +        + + D
Sbjct: 166 DGVYADLTSGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELIDEKVLGIGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 226 TDLKAKIDRAILDMV 240


>gi|196037503|ref|ZP_03104814.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus NVH0597-99]
 gi|196031745|gb|EDX70341.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus NVH0597-99]
          Length = 265

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    +S  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELAEEVSKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E   +        R D +T +        L   + ++  I+      S       
Sbjct: 170 EITNVEGFSQATELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V    
Sbjct: 229 KGSDKLVQEVDKAL 242


>gi|88601350|ref|YP_501528.1| extracellular solute-binding protein [Methanospirillum hungatei
           JF-1]
 gi|88186812|gb|ABD39809.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 272

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 87/262 (33%), Gaps = 26/262 (9%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K     ++   +L                 +     +     +++     GI+     
Sbjct: 1   MDKKVVSVLITFFVLIGVCLCGCTEKPAEEKGAVVAPEATAAGSEEKPTYIVGIDGEYPP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           ++ +  NG+ +GFDV+  + ++  +  +   ++   +       ALQ+ +ID++      
Sbjct: 61  YSFIDKNGEPQGFDVESVKWIADEMGFN---VKIQAMAWDGIIPALQAGKIDMVYSGMTI 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFK 165
           T  R+    + F    +   Q   +H     +    ++GA  +  Q GTT      D   
Sbjct: 118 TDERKEV--VNFSDPYWKVNQSVAVHDDSEFTMDDFMAGAGKVGAQRGTTGAFWAEDNLV 175

Query: 166 AHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
             ++      + ++    +    +  R D    D   +              I+ +I + 
Sbjct: 176 NKSIMTADMLVTYDNFPLVATDLQNKRIDFAIYDRPPMLDAIAGKP----LHIIGEIDTG 231

Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245
                AI + DTE    ++   
Sbjct: 232 EEYGIAIRKTDTELLETMNEGL 253


>gi|319638303|ref|ZP_07993066.1| amino acid ABC transporter [Neisseria mucosa C102]
 gi|317400576|gb|EFV81234.1| amino acid ABC transporter [Neisseria mucosa C102]
          Length = 274

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                 S + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGTIAAVVLAACGGEGSNSASSAPAQSGAASGSLIERINNKGTITVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +  K   I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|261218782|ref|ZP_05933063.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261321719|ref|ZP_05960916.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
 gi|260923871|gb|EEX90439.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261294409|gb|EEX97905.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
          Length = 282

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 49  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 105

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 106 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 163

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 164 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 219

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 220 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 259


>gi|308071441|ref|YP_003873046.1| Probable amino-acid ABC transporter binding protein yxeM precursor
           [Paenibacillus polymyxa E681]
 gi|305860720|gb|ADM72508.1| Probable amino-acid ABC transporter binding protein yxeM precursor
           [Paenibacillus polymyxa E681]
          Length = 269

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 76/239 (31%), Gaps = 10/239 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V+ + L ++  T   +  S          +  G       FA      +  G+D
Sbjct: 1   MKKSALVAAIGLSLVLLTGALSGCSSKDAASGDKVIYVGTQNDYPPFAFTNDKNELTGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + +   +  D  KI+++P      FLAL S ++ +++        RE      F  
Sbjct: 61  VEVVKEIDKKL--DGYKIEFVPSGWDAIFLALDSNKVQMIADEVAKNPEREK--KYLFSD 116

Query: 121 I-TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE- 177
              +      I+ K +  I S+  L G  +    G +    L  Y   +  K      + 
Sbjct: 117 ESYFSAQSVIIVKKGRTDIHSLKDLEGKKVAASVGDSYTQLLEQYNAKNGNKIILKYNDT 176

Query: 178 -RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               +     +  R DAY  D     A         +   + + +    +     +   
Sbjct: 177 GTSSDNLQDVQNGRVDAYVNDPVMTAA--TIKKEGLQVEAVGEPVQSDNINLVFKKDKQ 233


>gi|77459027|ref|YP_348533.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77383030|gb|ABA74543.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 273

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 81/259 (31%), Gaps = 23/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   + +  ++       L  + ++G L   +      F+ +       GFD
Sbjct: 1   MKTPTHLTLGLALAVSCSAAFA-GPTLDRVTQKGELTGVLMESYPPFSFLNDQNQLDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         + + DI   +   +  R       F  
Sbjct: 60  VDVAKAVAERLGVK---LKLETPSWDVIAAGRWNGRYDICVCSMTPSKARAEV--FDFPV 114

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----- 174
             Y       +  K K I++   LSG  + V + +T E  L         +  P+     
Sbjct: 115 EYYQSPAVIVVNAKDKDIATGKDLSGKKVGVISASTYEAYLNKDLVIEGAEDKPLSYPFD 174

Query: 175 -----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                 ++               R DA   +   L   +    +     I  D +   P 
Sbjct: 175 NVQIAPYDNETVAFQDLALGTGVRLDAMVTN---LITARERIAQDPRFKIAGDPLYAEPN 231

Query: 227 APAIIQGDTEWYNIVSWTH 245
             A+ +GD +W   V+   
Sbjct: 232 VVAVEKGDPQWNAKVTEVI 250


>gi|75909655|ref|YP_323951.1| extracellular solute-binding protein [Anabaena variabilis ATCC
           29413]
 gi|75703380|gb|ABA23056.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Anabaena variabilis ATCC 29413]
          Length = 271

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 101/248 (40%), Gaps = 12/248 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              +I+   ++  T  + +A+ L +I++RG++   +   L       A G+ +G ++D  
Sbjct: 17  ILSAIIICWMISATGLAASAAELPEIQRRGYITVAVKDNLPLLGFKDAQGNLQGLEIDLA 76

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L++ +      ++  P+N ++R   + + Q+D+       T  R     ++F    Y 
Sbjct: 77  KRLAADLLGKADAVKLQPVNNRDRLPVVFNHQVDLAIARVTATESRSRL--VSFSVPYYM 134

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DG   I      +  ++ L+   I V   ++T   +  Y  +       +     +E  A
Sbjct: 135 DGTYLITKDVS-VQQINDLATRKIAVLNNSSTIAEVRYYIPSA----ELVGVNSYQEAQA 189

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVS 242
           A   +   A+  D S L       D P ++ +LP  +S +PL+  + +     E    V+
Sbjct: 190 AIENNSVAAFAADGSLLSGW--VRDNP-QYRLLPTKLSTAPLSVVMPKGLQYDELRREVN 246

Query: 243 WTHYAMVT 250
               + + 
Sbjct: 247 EAIASYIA 254


>gi|238917322|ref|YP_002930839.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
 gi|238872682|gb|ACR72392.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
          Length = 510

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 23/261 (8%)

Query: 1   MYKD-----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K+       +++L +I+  FT+ S   S   D   R     G +     +     +G+
Sbjct: 5   MAKNIRKAVLLLAMLSVIVGMFTACSNKKS--DD--GRTTFTVGFDAEFPPYGYKDDSGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D  + +      +  K    P++   + + L S  ID +         RE    
Sbjct: 61  YVGFDLDLAQEVCERNGWNLVK---QPIDWDSKDMELSSGSIDCIWNGFTLNG-RER--E 114

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT------TTELTLADYFKAHNM 169
             +      + Q  I+    GI  +  L G  + VQA +      T E    +       
Sbjct: 115 YTWSKAYIDNSQVVIVKSGLGIKKLEDLKGKVVIVQADSSALAAFTGEDATEENLALAAQ 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                             +   DA   D+    A      R ++  +L + +S       
Sbjct: 175 FKTLQQVSDYNSAFMNLESGSADAVCMDM--GVAKYQLEQRGNKFTMLDETVSSEQYGIG 232

Query: 230 IIQGDTEWYNIVSWTHYAMVT 250
              G+T   + V  +   M+ 
Sbjct: 233 FKLGNTALRDEVQTSLNDMLA 253


>gi|254713965|ref|ZP_05175776.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M644/93/1]
 gi|254716977|ref|ZP_05178788.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M13/05/1]
          Length = 262

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 29  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 86  GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 200 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 239


>gi|229592163|ref|YP_002874282.1| putative histidine-binding periplasmic protein [Pseudomonas
           fluorescens SBW25]
 gi|229364029|emb|CAY51593.1| putative histidine-binding periplasmic protein precursor
           [Pseudomonas fluorescens SBW25]
          Length = 261

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 87/278 (31%), Gaps = 25/278 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLVLLGALALSVLSMQAFAEGKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCKQM---DVKCTWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFTN 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M +   +S     L G  I VQ G+  +    +           + +   
Sbjct: 106 RYYLSPAQLVMKEGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKG--ATVVPYSSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L       +  +       P      +  A+ +G
Sbjct: 164 NEIYLDVEAGRLDGTVADATLLQDGFLKTPAGKGYAFVG-PQFTDPKYFGDGIGIAVRKG 222

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
           D E  + ++    A+    E    Q           +P
Sbjct: 223 DKENLDRINAAIAAIRANGEYKKIQDKYFDFDIYGADP 260


>gi|15596457|ref|NP_249951.1| amino acid ABC transporter periplasmic binding protein [Pseudomonas
           aeruginosa PAO1]
 gi|218892766|ref|YP_002441635.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|254234386|ref|ZP_04927709.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719]
 gi|296390361|ref|ZP_06879836.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAb1]
 gi|9947192|gb|AAG04649.1|AE004555_9 amino acid ABC transporter periplasmic binding protein [Pseudomonas
           aeruginosa PAO1]
 gi|126166317|gb|EAZ51828.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719]
 gi|218772994|emb|CAW28806.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
          Length = 273

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L DI + G L+C +           A  +  GFDVD+C  L+ A+    
Sbjct: 17  CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       +R  AL S + D++  +T  TL R  ++G+      +   +  +  +  
Sbjct: 77  EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194
           GI+S   L G  +   AGT   L L    KA    K     ++   +   A      DA 
Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +   +   +       +          +A    + +    N ++    
Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243


>gi|188534835|ref|YP_001908632.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Erwinia tasmaniensis Et1/99]
 gi|188029877|emb|CAO97761.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Erwinia tasmaniensis Et1/99]
          Length = 257

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  ++   F+S +   + L  ++  G LK G       F+    +G   GFD
Sbjct: 1   MKSIATLLLAGMVQFGFSSQALAETELAKVQSAGTLKIGTEGTYPPFSYHDTSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +        ++          L +++ D +      T  R       F  
Sbjct: 61  VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I+S   L G        T+    LA  + A       +  +  
Sbjct: 116 PYISSRAVLIVRSNNGAITSFDDLKGKKSA-HTLTSNFAQLATRYGA-----QVVGTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D    Y     +   ++  I   +         + + + E   
Sbjct: 170 NQSVDLVASGRADATINDN-LSYLDFKKHKPDADVKIAATLPDAEDEGILLRKNNPELKA 228

Query: 240 IVSWTH 245
            +    
Sbjct: 229 AIDKAI 234


>gi|148559050|ref|YP_001258837.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|260563889|ref|ZP_05834375.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           melitensis bv. 1 str. 16M]
 gi|260757834|ref|ZP_05870182.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260761657|ref|ZP_05874000.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260883638|ref|ZP_05895252.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|261213861|ref|ZP_05928142.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|261222047|ref|ZP_05936328.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261314392|ref|ZP_05953589.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261317512|ref|ZP_05956709.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261324969|ref|ZP_05964166.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261752179|ref|ZP_05995888.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261758065|ref|ZP_06001774.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99]
 gi|265988547|ref|ZP_06101104.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
 gi|265990961|ref|ZP_06103518.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265994798|ref|ZP_06107355.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|265998012|ref|ZP_06110569.1| extracellular solute-binding protein family 3 [Brucella ceti
           M490/95/1]
 gi|265999502|ref|ZP_05466659.2| bacterial extracellular solute-binding protein [Brucella melitensis
           bv. 2 str. 63/9]
 gi|306840354|ref|ZP_07473123.1| extracellular solute-binding protein [Brucella sp. BO2]
 gi|148370307|gb|ABQ60286.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|260153905|gb|EEW88997.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           melitensis bv. 1 str. 16M]
 gi|260668152|gb|EEX55092.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260672089|gb|EEX58910.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260873166|gb|EEX80235.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|260915468|gb|EEX82329.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|260920631|gb|EEX87284.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261296735|gb|EEY00232.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261300949|gb|EEY04446.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261303418|gb|EEY06915.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261738049|gb|EEY26045.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99]
 gi|261741932|gb|EEY29858.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|262552480|gb|EEZ08470.1| extracellular solute-binding protein family 3 [Brucella ceti
           M490/95/1]
 gi|262765911|gb|EEZ11700.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|263001745|gb|EEZ14320.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263094346|gb|EEZ18191.1| bacterial extracellular solute-binding protein [Brucella melitensis
           bv. 2 str. 63/9]
 gi|264660744|gb|EEZ31005.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
 gi|306289675|gb|EFM60871.1| extracellular solute-binding protein [Brucella sp. BO2]
          Length = 282

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 49  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 105

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 106 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 163

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 164 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 219

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 220 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 259


>gi|330872824|gb|EGH06973.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 261

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 10/244 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +    +A+ L D+  RG LK  +      F  V  +   +G D+D  + L+  +    
Sbjct: 17  MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++  P+N   R   L + ++D++  +      RE    + F                 
Sbjct: 74  VKLELTPVNNTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            +  ++ L G +I V  G   ++ L+              FE      AAY A + D   
Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                + A  ++   P     L   +  SP+   + +G  E    V     A      L 
Sbjct: 189 SGNVVMAA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246

Query: 256 ITQK 259
              +
Sbjct: 247 KASQ 250


>gi|107100709|ref|ZP_01364627.1| hypothetical protein PaerPA_01001736 [Pseudomonas aeruginosa PACS2]
          Length = 273

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L DI + G L+C +           A  +  GFDVD+C  L+ A+    
Sbjct: 17  CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       +R  AL S + D++  +T  TL R  ++G+      +   +  +  +  
Sbjct: 77  EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194
           GI+S   L G  +   AGT   L L    +A    K     ++   +   A      DA 
Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSRAWGDAKGSFRAYQSEADTALAISQGHIDAT 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +   +   +       +          +A    + +    N ++    
Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243


>gi|78043559|ref|YP_359362.1| glutamine ABC transporter glutamine-binding protein
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995674|gb|ABB14573.1| glutamine ABC transporter, glutamine-binding protein
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 272

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 88/267 (32%), Gaps = 20/267 (7%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGF-------LKCGINTGLVGFAEV 50
           M K    F V +L L ++     +  A      + +         +    +T    F   
Sbjct: 1   MKKFGALFLVVVLTLGLILTACGNKQAEQTNSAQNQEQKQEQKQKIVVASDTSYAPFEFQ 60

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
             + G + GFD+D  +A+  A+  +   ++   +N      ++QS  +D        T  
Sbjct: 61  DPSTGKYVGFDMDLIQAIGEAVGFE---VEIKSMNFDGVLTSVQSGTVDAAISAISITDK 117

Query: 110 REISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R+  +   F    Y  G   ++      I  +  L G  + VQ  TT      +  KA  
Sbjct: 118 RKEVM--NFSEPYYDSGLAIVVKGDNNTIKGIDDLKGKRVAVQIATTGADYANE-LKAKG 174

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           +      F  + +     R +  DA   D          +   S+  ++ D ++      
Sbjct: 175 IVKEVKTFNTLPDALMELRNNGVDAVINDWPVNAYYIKQS--FSDLKMVGDKLTGESYGI 232

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
           A+ +   E    ++     +  + +  
Sbjct: 233 AVPKSKPEILAKINEGLKKVKESGKYA 259


>gi|313106245|ref|ZP_07792494.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
 gi|310878996|gb|EFQ37590.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
          Length = 273

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L DI + G L+C +           A  +  GFDVD+C  L+ A+    
Sbjct: 17  CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCHDLAKALDVKA 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       +R  AL S + D++  +T  TL R  ++G+      +   +  +  +  
Sbjct: 77  EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194
           GI+S   L G  +   AGT   L L    KA    K     ++   +   A      DA 
Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +   +   +       +          +A    + +    N ++    
Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243


>gi|254689113|ref|ZP_05152367.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 6 str. 870]
 gi|260754611|ref|ZP_05866959.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260674719|gb|EEX61540.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
          Length = 254

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 21  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 77

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 78  GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 135

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 136 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 191

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 192 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 231


>gi|17987387|ref|NP_540021.1| arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis bv. 1 str. 16M]
 gi|17983075|gb|AAL52285.1| arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis bv. 1 str. 16M]
          Length = 251

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 18  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 74

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 75  GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 132

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 133 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 188

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 189 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 228


>gi|315037815|ref|YP_004031383.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL
           1112]
 gi|312275948|gb|ADQ58588.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL
           1112]
 gi|327183109|gb|AEA31556.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL
           1118]
          Length = 272

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 85/234 (36%), Gaps = 10/234 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L         ++   ++    +  G+      F      +G  +GF++D  +AL+  + 
Sbjct: 19  TLSACGNKGKQNVYQKVETSKHIVWGVRADTRLFGLTNVKSGKIEGFEMDLAKALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                  ++   A  R   L++  +D +      T  R     + F    +  G   ++ 
Sbjct: 79  GKKGTASFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFTKAYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I++V  L+  ++    GTT    +             + ++   +  +A +A++  
Sbjct: 137 NNSKITNVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A T D   L  +    + P  + ++  + S +P   A+ +G TE  + ++    
Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSDAPYGIAVNKGQTEMADHINKALK 243


>gi|323464072|gb|ADX76225.1| glutamine-binding periplasmic protein [Staphylococcus
           pseudintermedius ED99]
          Length = 486

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 90/258 (34%), Gaps = 23/258 (8%)

Query: 1   MY---KDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49
           M    K   + ++ +  +        + + +      IK RG L+ G++           
Sbjct: 1   MKYLGKLMTMMLIVVFSISGIPAKYDAQAASEDQWDVIKDRGELRVGLSADYAPMEFERT 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V    ++ G D++  + ++     +  K++ + +       AL++ +ID++      T  
Sbjct: 61  VNGEREYAGIDIELAKKIAKD---NGVKLKIVNMQFDSLLGALKTGKIDMIISGMTPTAE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R+    + F        Q  ++ K  K    ++  L+   I  Q  TT E       +  
Sbjct: 118 RKK--EVDFSDNYMTVDQKVVVRKKDKDKYKTLKDLAHHRIGAQKQTTQEELAQKEIE-- 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                     R+ E+  + ++++ DA   D +   A    N+            SK   A
Sbjct: 174 --GADVQSLTRLPEVILSLKSNKVDAIVMDSAVGKAYLEQNEE-LTFSDASFADSKKQTA 230

Query: 228 PAIIQGDTEWYNIVSWTH 245
            AI +   +    V+ + 
Sbjct: 231 IAIPKDSPKLLKRVNQSI 248


>gi|288905201|ref|YP_003430423.1| amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus UCN34]
 gi|288731927|emb|CBI13492.1| Putative amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus UCN34]
          Length = 280

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 74/258 (28%), Gaps = 17/258 (6%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51
           M  K   +  L L+     +  +++               K G +  G +   V      
Sbjct: 1   MKFKKVLMGALALVSTLTLAACSSSSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFD+D   A+          +++  +N   +   L +  ID++      T  R 
Sbjct: 61  EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDERA 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168
               + F      + Q  +  K  GI+S + +    +  Q+G++         +  K   
Sbjct: 118 E--KVLFTNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIV 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  +E   +     +  R D    D                + I+         A 
Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235

Query: 229 AIIQGDTEWYNIVSWTHY 246
              + D      ++    
Sbjct: 236 GARKADKTLVKKINQAFK 253


>gi|209516767|ref|ZP_03265618.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209502730|gb|EEA02735.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 260

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 89/251 (35%), Gaps = 21/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V++  + +    + S         K+   ++ GI+     F  +  +G   GFD
Sbjct: 1   MKRSLKVAVAAVSMALACAASA--------KEWQTIRVGIDPTYPPFESLSTSGTVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +    +K  ++  +       LQ+++ D++  +   T  R     + F  
Sbjct: 53  VDLGNALCTKL---KAKCVWVQSSFDGLIPGLQARKFDVILSSMAATAKR--REQIDFTD 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y +    I  +  G +   ++L    + VQ GT  E    + + A       + ++  
Sbjct: 108 RLYRNQTRLIAREGSGLLPDGAKLGHKRVAVQQGTVQETYAREKWAAAG--VEVVSYQNY 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           ++  A     R DA   D        L            +++    +     A  + + D
Sbjct: 166 DQAYADLGTGRVDAVLMDAVQGKLGFLDTPSGKGFAFAGEVVYDPKIMGDGDAAGVRKSD 225

Query: 235 TEWYNIVSWTH 245
           ++  + ++   
Sbjct: 226 SDLRDALNVAI 236


>gi|62289808|ref|YP_221601.1| amino acid ABC transporter periplasmic-binding protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|225852374|ref|YP_002732607.1| extracellular solute-binding protein family 3 [Brucella melitensis
           ATCC 23457]
 gi|254697246|ref|ZP_05159074.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|256031458|ref|ZP_05445072.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis M292/94/1]
 gi|256254864|ref|ZP_05460400.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti B1/94]
 gi|256257362|ref|ZP_05462898.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 9 str. C68]
 gi|62195940|gb|AAX74240.1| hypothetical amino-acid ABC transporter, periplasmic binding
           protein protein [Brucella abortus bv. 1 str. 9-941]
 gi|225640739|gb|ACO00653.1| extracellular solute-binding protein family 3 [Brucella melitensis
           ATCC 23457]
          Length = 262

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 29  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 86  GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 200 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 239


>gi|165761002|pdb|2Q2A|A Chain A, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
 gi|165761003|pdb|2Q2A|B Chain B, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
 gi|165761004|pdb|2Q2A|C Chain C, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
 gi|165761005|pdb|2Q2A|D Chain D, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
          Length = 243

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 11/223 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +  +  G +     F  ++  G   GFDVD   A+  A   D        +     F +L
Sbjct: 10  KKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASL 65

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           QSK++D+       T  R+      F    +   Q  ++ +   + +   L G +I VQ 
Sbjct: 66  QSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQN 123

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT +      F       H   FE              DA   D +        N    
Sbjct: 124 ATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKK 180

Query: 213 EHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             VI  P   +         + ++E    V      ++ + + 
Sbjct: 181 LQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 222


>gi|312795993|ref|YP_004028915.1| Histidine-binding protein [Burkholderia rhizoxinica HKI 454]
 gi|312167768|emb|CBW74771.1| Histidine-binding protein [Burkholderia rhizoxinica HKI 454]
          Length = 276

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 19/254 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F ++   ++ F  S    A     I      + G++     F    A+G   GFD+D
Sbjct: 17  KKLFAAMSVAVVAFGASAGAYAKDWSTI------RFGVDASYPPFESKAADGKLVGFDID 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   +    +K  ++  N      AL++++ D +  +   T  R   +   F    
Sbjct: 71  LGNEICRRL---HAKCMWVENNFDGMIPALKARKFDGVLSSMTMTPQRAKQVA--FSAKL 125

Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +      +      I  +   L G  + V+ GT  E     Y+         + ++  ++
Sbjct: 126 FNTPTRLVAKVGSSIQPTPESLKGKRVGVEQGTIQETYAKTYWAPKG--VEVVPYQNQDQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236
           + A   A R DA   D        L   R   +  +   +          +  + + DT+
Sbjct: 184 VYADLLAGRLDAALQDTVQADVGFLKTPRGKGYAFVGPGLQDEKTLGTGASIGLRKKDTD 243

Query: 237 WYNIVSWTHYAMVT 250
              +++     M+ 
Sbjct: 244 LKVMINKAISDMLN 257


>gi|261380949|ref|ZP_05985522.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria subflava NJ9703]
 gi|284796208|gb|EFC51555.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria subflava NJ9703]
          Length = 274

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                 S S + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGSIAAVVLAACGGEGSNSASSTPAQSGSASGSLIERINNKGTITVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +  K   I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|209546711|ref|YP_002278629.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537955|gb|ACI57889.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 275

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 78/239 (32%), Gaps = 10/239 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K      ++    LF  + S   A  L  +K  G +K G  T    F  + A G+  G
Sbjct: 1   MRKNSLLKGLVGAAFLFGATISAHAADTLAAVKAAGTMKVGTETAFAPFDFIDA-GEHVG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +VD    +   +      I+++ L     F AL++ + D+++     T  R       F
Sbjct: 60  LNVDLFNEIGKELGVK---IEWVTLPWDGVFPALEAGKFDVVAGPATITKKR--MERYRF 114

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            P         +     + I+    ++G  I V   T     L ++ +    K     + 
Sbjct: 115 TPPLAEATIAILKKAGDQTINKPEDIAGKKIGVGKATAQLDQLKEFSETLPTKVDIREYP 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E  A   A R       +  +          +  V+LP    KS      ++    
Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232


>gi|225870335|ref|YP_002746282.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
 gi|225699739|emb|CAW93498.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
          Length = 258

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 76/243 (31%), Gaps = 14/243 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCR 65
           ++ +  L     +   S+   I+++G L   ++     F     V       G D++  +
Sbjct: 1   MVSVFALAACGQANKTSLQDRIQEKGKLVVAVSPDYAPFEFKALVDGKDTIVGADIELAQ 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +      ++   +N      +LQ+ ++DI      +T  R       F    Y  
Sbjct: 61  AIADELGVK---LELSAMNFDNVLSSLQTGKVDIAISGLSYTKERAKV--YDFSEAYYET 115

Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
               ++        ++   L G  + VQ G+  E  + +     N     +    + E  
Sbjct: 116 ENAILVKASDAKHYANKDSLVGKKVAVQKGSIEEGLVKEQLNKANC----VSLTVMGEAI 171

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              ++ +  A   +          +   +              A A+ +G  +    ++ 
Sbjct: 172 NELKSGQVQAVDLEAPVAAGFLAQHKDLALAPFKLQASDGDAKAVAMPKGSDDLRQTINK 231

Query: 244 THY 246
              
Sbjct: 232 VIK 234


>gi|78063101|ref|YP_373009.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77970986|gb|ABB12365.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 260

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 95/255 (37%), Gaps = 21/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  +      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GTT E     Y+       + + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPL----APAIIQGD 234
           + + A   + R DA   D        L + R + +  + P+++    L       + + D
Sbjct: 166 DGVYADLTSGRLDAALQDEVQAAIGFLKSSRGANYTFVGPELVDDKVLGIGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +      MV
Sbjct: 226 TDLKAKIDGAILDMV 240


>gi|255598562|ref|XP_002537036.1| Cystine-binding periplasmic protein precursor, putative [Ricinus
           communis]
 gi|223517731|gb|EEF25348.1| Cystine-binding periplasmic protein precursor, putative [Ricinus
           communis]
          Length = 271

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 10/226 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A +L  +K RG L+  +      F       G   G+DV+  R L++ +   P    
Sbjct: 29  AHAADLLDTVKARGTLRIAMEGTYPPFNYKDKKTGQLTGYDVEVARLLAARMGLKPE--- 85

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++          L + + D++      T  RE +   +              +      S
Sbjct: 86  FISTEWSAILAGLGAGKYDVIVAQVGITPKREATFDFSVPYTYSIPQLVVRNNDTTSYKS 145

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           ++ L G  + V  GT  E  L    KA         +    E        R DA   D  
Sbjct: 146 LADLKGKKVGVGQGTVFEQQL----KAAPPGIDIKSYPATPETLQDLAFGRIDAALQDSL 201

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  L   +  P        +   S +     +G+ ++   +    
Sbjct: 202 MVNYLVKNSHLP--LRGGARVGEISRMGIPFQKGNPKFKAALDKAI 245


>gi|310643433|ref|YP_003948191.1| amino acid abc transporter [Paenibacillus polymyxa SC2]
 gi|309248383|gb|ADO57950.1| amino acid ABC transporter [Paenibacillus polymyxa SC2]
          Length = 283

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 74/272 (27%), Gaps = 39/272 (14%)

Query: 1   MYK-DFFVSILCLIILFFTSFS-------------------------TNASILGDIKKRG 34
           M K  F   +  ++ L  ++                           T A+ L  +K  G
Sbjct: 1   MRKFSFLPIVFIVMALLVSACGNNDKGAGTNNASTGENGSNNGKADTTAAATLESVKASG 60

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G       F    A G   GFDVD    +S  +   P    ++       F  L S
Sbjct: 61  KLRIGTEGTYAPFTYHDAAGKLTGFDVDIATEVSKRLGVQPE---FIETQWDGIFAGLNS 117

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAG 153
           K+ D +      T  R+      F            +      I   S L G        
Sbjct: 118 KRFDAVFNEVSITDERK--QKYDFSDPYIVSKAVLIVSEDNTDIQKFSDLKGKKAG---- 171

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            +    L    K++      +  E   +      + R DA   D  +   LK        
Sbjct: 172 QSLTSNLTQIAKSNG--AEIVATEGFNQAIDLLTSKRVDATVNDGLSYLDLKKQKPDAP- 228

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              + +    S  A    +G  +    V+   
Sbjct: 229 IKKVDESADASHSAAVFNKGSEDLIKAVNKAL 260


>gi|260102963|ref|ZP_05753200.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus helveticus DSM 20075]
 gi|260083248|gb|EEW67368.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus helveticus DSM 20075]
 gi|328463862|gb|EGF35396.1| amino acid ABC transporter, amino acid-binding protein
           [Lactobacillus helveticus MTCC 5463]
          Length = 267

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 84/233 (36%), Gaps = 7/233 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            L   + S N      I+K   +  G++   V     K NG   G+D+D  RA+      
Sbjct: 15  TLTGCAKSNNPDSWQTIEKNKQVVIGLDDSFVPMGFEKKNGQLTGYDIDLARAVFKEYG- 73

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              K+ +  ++       L++  ID++      T  R+    +AF      + Q  ++ K
Sbjct: 74  --IKVSFQTIDWSMNVTELRNGTIDLIWNGYSITPERKK--KVAFSRPYLRNRQVLVVKK 129

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI SV+Q+    + +Q G+T E          + K   + ++ +        + R   
Sbjct: 130 NSGIDSVAQMKKYELGMQTGSTAEQWYETKQNVLHAKKTIL-YDTISNSFLDLNSGRIQG 188

Query: 194 YTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D            + SE+ ++  D +     A  + +GD      ++   
Sbjct: 189 ILLDEVYADYYIAHMVKSSEYKVIQNDRVPFDEFAVGMRKGDKTLQKKLNEGL 241


>gi|262043355|ref|ZP_06016483.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette
           transporter, binding protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039307|gb|EEW40450.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette
           transporter, binding protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 260

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   ++ S  A++   I      + G +     F+   A GD+ GFD
Sbjct: 1   MKKTIL--ALSLLVGMSSTASVFAALPQSI------RIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L S I     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D +++  +    + ++  
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E                E+       ++++K   + +V
Sbjct: 226 AELKAAFDKAL------GEMRKDGT-YDKMAKKYFDFNV 257


>gi|49082912|gb|AAT50856.1| PA0888 [synthetic construct]
          Length = 260

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+ +            ++ GI      F+    +G   GFD
Sbjct: 1   MKKLALLGALALSVLSLPTFAADKP----------VRIGIEAAYPPFSLKTPDGQLAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     + +++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  VDIGNALCEEM---KVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKR--SVDFTN 105

Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+M +   ++     L G    V  G+T +   +            + +   
Sbjct: 106 KYYNTPVRFVMKEGASLNDPKADLKGKKAGVLRGSTADRYASAELTPAG--VEVVRYNSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E +    A R DA   D   L    L  D    +  +   ++ +         A+ +GD
Sbjct: 164 QEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLTDAKYFGEGVGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
           +E     +    A+
Sbjct: 224 SELAGKFNAAIDAL 237


>gi|134288194|ref|YP_001110357.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134132844|gb|ABO59554.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 255

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 86/257 (33%), Gaps = 26/257 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L      +           K    ++ G       F     +G   GFD
Sbjct: 1   MKKLAISVALALAATSVYA-----------KDWKEIRFGTEPTSPPFESKAIDGKLVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +    +K  ++  +      AL++K+ D +  +   T  R     +AF  
Sbjct: 50  IDLGNAICAKL---KAKCVWVENDFDGMIPALKAKKFDGILASMTVTEKR--MQEIAFSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K  G +   + L G  + V+ GT  E     ++++     +   ++  
Sbjct: 105 KIYNTPTRLVTKKGSGLLPIATSLKGKRVGVEQGTIQETYAKAHWESAG--VNVTSYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233
           + +    ++ R DA+  D  A     L   +  +           P       A  + + 
Sbjct: 163 DLVYQDMQSGRLDAFLQDAIAADLGFLKTPKGHDFAFAG-PNLDDPSTLGTGAAIGLRKE 221

Query: 234 DTEWYNIVSWTHYAMVT 250
           D +    ++    A++T
Sbjct: 222 DVDLRQAINMALAAIMT 238


>gi|310768019|gb|ADP12969.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand
           binding protein [Erwinia sp. Ejp617]
          Length = 264

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 87/249 (34%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +  L ++   S +  A     I++   ++  ++     F      G+  GFD
Sbjct: 4   MERATVGKLAALALMSSCSLTAQA----KIEQ---VRFAVDASYPPFESKTPKGELVGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    +   ++         AL++++ D +  +   T  R   +     P
Sbjct: 57  IDLGNALCTQM---QANCVWVESQFDGMIPALKARKFDAILSDMGITEERLKQINFT-VP 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +     Q         +   + L G ++ VQ GT  E      ++ H    + + +    
Sbjct: 113 LYDTHTQLIARKGSGLLPDAASLKGKNVGVQQGTVQERYALAKWQPHG--VNVVAYGDQA 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +++    + R D    D +      L + +  +   L   I + P+     A  + +GD 
Sbjct: 171 QVENDLVSGRLDVVFTDAAQAAIGFLKHPQGQDF-ELAGPIVQDPIIGPGTAIGLRKGDD 229

Query: 236 EWYNIVSWT 244
           E    +   
Sbjct: 230 ELKTALDNA 238


>gi|15891686|ref|NP_357358.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15160140|gb|AAK90143.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 300

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 103/285 (36%), Gaps = 11/285 (3%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S +     L  I + G ++ G     + F+ +    +  G+ ++ C  ++ +I   
Sbjct: 18  VAAASDNAQPPTLETIARTGTIRLGFADRNIPFSYLGTGPEPIGYSIELCLRVADSIKRK 77

Query: 75  ----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 K++++      R + L    ID+    +  T  R     + F    +  G  ++
Sbjct: 78  LALPELKVEFVKRTPSNRIMLLNDGTIDMECVASTNTEERRK--AVWFSYSHFITGTRYV 135

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             K  G+++V+ L+G ++ V  GT     L    +   M    +  +  E        +R
Sbjct: 136 ALKSSGLNTVADLAGRTVVVTTGTINISQLNVLNRKLGMNIAVLQNDSTEGSFDMVTENR 195

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             A+  D   L +      RP ++VI  + +    P    +  GDT + + V+     + 
Sbjct: 196 ASAFVMDDILLRSFIAETGRPEDYVISNEYLAPPQPYGLMLRHGDTGFRDAVNEALGQIY 255

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
            + E+                 +++R L      ++ EA     D
Sbjct: 256 QSGEIEKIYDKWFNAPIPPNGINLKRPL----PGDLAEAFRSPVD 296


>gi|325956290|ref|YP_004286900.1| glutamine-binding protein [Lactobacillus acidophilus 30SC]
 gi|325332855|gb|ADZ06763.1| glutamine-binding protein precursor [Lactobacillus acidophilus
           30SC]
          Length = 272

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 84/234 (35%), Gaps = 10/234 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
            L         ++   ++    +  G+      F      +G  +GF++D  +AL+  + 
Sbjct: 19  TLSACGNKGKQNVYQKVETSKHIVWGVRADTRLFGLTNVKSGKIEGFEMDLAKALTKQML 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                  ++   A  R   L++  +D +      T  R     + F    +  G   ++ 
Sbjct: 79  GKKGTASFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFTKAYFPAGSSLLVP 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I++V  L+  ++    GTT    +             + ++   +  +A +A++  
Sbjct: 137 NNSKITNVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQYDDYGQAMSALKANQGV 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A T D   L  +   N     + ++  + S +P   A+ +G TE  + ++    
Sbjct: 193 ALTTDNGLLAGIAQENKG---YKLVGGVYSDAPYGIAVNKGQTEMADHINKALK 243


>gi|255066533|ref|ZP_05318388.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria sicca ATCC 29256]
 gi|255049117|gb|EET44581.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria sicca ATCC 29256]
          Length = 280

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 82/227 (36%), Gaps = 10/227 (4%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K     +   N     F  + + G+ +GFDVD   A++ A      K+++        F 
Sbjct: 34  KADKVYRVAANAEFAPFESLDSAGNVEGFDVDLMNAMAKAGG---FKVEFKHQPWDSLFP 90

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SIC 149
           AL++   DI+      T  R+    + F    +   Q  ++ K K ++S   L     + 
Sbjct: 91  ALKNGDTDIVISGVTITDERK--QSMDFTDPYFEITQVVLVPKGKKVASSDDLKNMAKVG 148

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  G T + +++      N       FE V  +         DA   D + +      N 
Sbjct: 149 VVTGQTGDFSVSKLLG--NDNPKIARFESVPLVIKELENGGVDAVVSDSAVIANYVKNNP 206

Query: 210 -RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +  + + LPD  +      A+ +GD     +++     +  + E  
Sbjct: 207 TKSMDFITLPD-FTIENYGIAVRKGDEATVKMLNEALKKVRDSGEYD 252


>gi|91778422|ref|YP_553630.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia xenovorans LB400]
 gi|91691082|gb|ABE34280.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 274

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%)

Query: 3   KDFFVSILC------LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           +  F ++        L  L     + +A  L  I K G ++ G+      F  +  +   
Sbjct: 12  RRVFATLAATLAFTGLGALCALPSAAHADALDTIAKSGTVRIGVFEDYPPFGSIGPDMKP 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D+D    +  A+    +K++ +P+    R   L   + D+L      T  RE    +
Sbjct: 72  MGYDIDVANLIGKAL---NAKVELVPVTGDNRMAYLADHKADMLLS-VGQTPEREKV--I 125

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F              K   + + + L+G SI V  GT  +L++           +   F
Sbjct: 126 DFSQPYAPYYLAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRF 182

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +      +A+ + +             +      P+        +  SP    + + +  
Sbjct: 183 DDPNGAISAFLSGQVQLMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPR 240

Query: 237 WYNIVSWTH 245
               V  T 
Sbjct: 241 LKQKVDETI 249


>gi|327438994|dbj|BAK15359.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Solibacillus silvestris
           StLB046]
          Length = 266

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 77/274 (28%), Gaps = 25/274 (9%)

Query: 1   MYKDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K   +  L  ++L            S   + L +I+  G ++ G+      F+    +
Sbjct: 1   MKKLLSIVTLSALVLAACGGDKSDENASEAKNKLEEIQADGKIQIGLEGTFPPFSFHDES 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+ +    ++  +  +     Y+          L + + D +  N   T  R+  
Sbjct: 61  GALTGFEYEIADQIAKDLGVEAE---YVETKWDSLIAGLDTDKYDFVINNVSITDERKE- 116

Query: 114 LGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F            +      I   + + G      +  T     A   +A      
Sbjct: 117 -KYDFSVPYMKSEAVVAVHTDNTEIKEPADMKGKK----SSQTITSNFARDAEALG--AE 169

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +    +          R D    D              ++  +L   I+ + +A  + +
Sbjct: 170 VVATNDLMSSIELVVQGRADGTIHDRVTFLTYLQEQPD-TKLKVLDGAINSTDIALILNK 228

Query: 233 GDTEWYNIVSWTHY-----AMVTAEELGITQKNI 261
            + E+   ++             A       +N+
Sbjct: 229 ENDEFREKLNEIIKERTEDGTFEAISEKYFGENV 262


>gi|239928983|ref|ZP_04685936.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 348

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 18/256 (7%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
               ++      +   I+ +G +K G +           +G   G D D   AL   +  
Sbjct: 75  TASTSAAPLADKLPQAIRDKGVVKVGSDIAYAPVEFKDDSGKTVGIDPDVAAALGKQLGV 134

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITY 123
                ++           L+SK+ DI       T  R+  +          G+ F    +
Sbjct: 135 K---FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDFVD-YF 190

Query: 124 FDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERV 179
             G      K   +GI + S L G  I VQ GT +E       +      K     F+  
Sbjct: 191 TAGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEAFDND 250

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++     RA   +A + D         T+   ++  ++ + +  +P   AI + +T+  +
Sbjct: 251 QQAQTRLRAGGANAGSSDFPVAAYAVKTSGGGNDFQLVGEQVEAAPYGIAIAKDNTQLRD 310

Query: 240 IVSWTHYAMVTAEELG 255
            +     A++   E  
Sbjct: 311 AIKAALDAIIENGEYQ 326


>gi|256832817|ref|YP_003161544.1| extracellular solute-binding protein family 3 [Jonesia
           denitrificans DSM 20603]
 gi|256686348|gb|ACV09241.1| extracellular solute-binding protein family 3 [Jonesia
           denitrificans DSM 20603]
          Length = 278

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 78/217 (35%), Gaps = 7/217 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  GI     G        ++ GFDVD  R ++  +      ++++   +  R   L+ 
Sbjct: 36  TLTIGIKFDQPGLGFKDGE-EYTGFDVDVARYVADKLGYAEEDVEFVEAISANRETMLEG 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
            Q+D++      T  R+    + F    +  GQ  ++   +   +    L G ++C  +G
Sbjct: 95  DQVDMIFATYSITEERDEV--VDFAGPYFVAGQDLLVRADETDITGPDTLEGKNLCSVSG 152

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   + D +       + +      E  +   + + DA T D   L  L    +    
Sbjct: 153 STSAQRVKDTYD-QGTGINLVEQPGYSECLSLLTSGQVDAVTTDDIILAGLAA-EEGSGA 210

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             ++ +  S+      I +G  +    ++     M  
Sbjct: 211 MKVVGNPFSEERYGVGIPEGSDQC-QAINDALTDMFE 246


>gi|206580482|ref|YP_002237298.1| lysine-arginine-ornithine-binding periplasmic protein [Klebsiella
           pneumoniae 342]
 gi|238895829|ref|YP_002920565.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Klebsiella pneumoniae NTUH-K2044]
 gi|288934233|ref|YP_003438292.1| cationic amino acid ABC transporter periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|329997348|ref|ZP_08302731.1| lysine/arginine/ornithine ABC transporter [Klebsiella sp. MS 92-3]
 gi|206569540|gb|ACI11316.1| lysine-arginine-ornithine-binding periplasmic protein [Klebsiella
           pneumoniae 342]
 gi|238548147|dbj|BAH64498.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288888962|gb|ADC57280.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|328539097|gb|EGF65133.1| lysine/arginine/ornithine ABC transporter [Klebsiella sp. MS 92-3]
          Length = 260

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   ++ S  A++   I      + G +     F+   A GD+ GFD
Sbjct: 1   MKKTIL--ALSLLVGMSSTASVFAALPQSI------RIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L S I     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D +++  +    + ++  
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E                E+       ++++K   + +V
Sbjct: 226 AELKAAFDKAL------GEMRKDGT-YDKMAKKYFDFNV 257


>gi|170770021|ref|ZP_02904474.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia albertii TW07627]
 gi|218548382|ref|YP_002382173.1| arginine ABC transporter periplasmic-binding protein [Escherichia
           fergusonii ATCC 35469]
 gi|170121087|gb|EDS90018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia albertii TW07627]
 gi|218355923|emb|CAQ88538.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
 gi|323967298|gb|EGB62721.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli M863]
 gi|323976752|gb|EGB71840.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TW10509]
 gi|324112655|gb|EGC06631.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
 gi|325496805|gb|EGC94664.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia fergusonii ECD227]
 gi|327253650|gb|EGE65279.1| arginine-binding periplasmic protein 1 [Escherichia coli STEC_7v]
          Length = 243

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 84/249 (33%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESMDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ +++D +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVDAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LQQKFNTAL 224


>gi|165761009|pdb|2Q2C|B Chain B, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
          Length = 234

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 69/222 (31%), Gaps = 11/222 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G +     F  ++  G   GFDVD   A+  A   D        +     F +LQ
Sbjct: 1   KKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASLQ 56

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           SK++D+       T  R+      F    +   Q  ++ +   + +   L G +I VQ  
Sbjct: 57  SKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQNA 114

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +      F       H   FE              DA   D +        N     
Sbjct: 115 TTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKL 171

Query: 214 HVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            VI  P   +         + ++E    V      ++ + + 
Sbjct: 172 QVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 212


>gi|165761008|pdb|2Q2C|A Chain A, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
 gi|165761010|pdb|2Q2C|C Chain C, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
 gi|165761011|pdb|2Q2C|D Chain D, Crystal Structures Of The Arginine-, Lysine-, Histidine-
           Binding Protein Artj From The Thermophilic Bacterium
           Geobacillus Stearothermophilus
          Length = 233

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 69/222 (31%), Gaps = 11/222 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G +     F  ++  G   GFDVD   A+  A   D        +     F +LQ
Sbjct: 1   KKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASLQ 56

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           SK++D+       T  R+      F    +   Q  ++ +   + +   L G +I VQ  
Sbjct: 57  SKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQNA 114

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +      F       H   FE              DA   D +        N     
Sbjct: 115 TTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKL 171

Query: 214 HVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            VI  P   +         + ++E    V      ++ + + 
Sbjct: 172 QVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 212


>gi|300858066|ref|YP_003783049.1| glutamate ABC transporter substrate-binding protein
           [Corynebacterium pseudotuberculosis FRC41]
 gi|300685520|gb|ADK28442.1| glutamate ABC transport system substrate-binding protein
           [Corynebacterium pseudotuberculosis FRC41]
 gi|302205788|gb|ADL10130.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis
           C231]
 gi|302330347|gb|ADL20541.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis
           1002]
 gi|308276023|gb|ADO25922.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis
           I19]
          Length = 293

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 93/287 (32%), Gaps = 27/287 (9%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +    F+    + +L  T+ +         A +LG I + G +  G      G    +
Sbjct: 1   MIRTSTRFLGASAIALLSATTLAACGGNNNDGAGLLGHI-ESGQVTLGTKFDQPGLGMKE 59

Query: 52  ANGDWKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           A+G   G DVD        ++         +++    + +R   +Q+ ++D+++      
Sbjct: 60  ASGGMSGLDVDIAQYVVNHIADTKGWKHPDVEWRETPSAQRESLIQNGEVDLIAATYSIN 119

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQL-SGASICVQAGTTTELTLADYFK 165
             R  +  + F        Q  +  K    I  V  L  G  +C  +G+T    + +   
Sbjct: 120 KSRAET--VNFGGPYLLTHQALLTRKDDAGIKEVKDLEHGKILCSVSGSTPAQKVKESLP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP----SEHVILPDII 221
                     ++       A R    DA T D + L      N+                
Sbjct: 178 ----GVQLQEYDTYSSCVEALRQGNVDALTTDATILNGYAQQNEGSFKVVEMFKEDQTPY 233

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKD 267
           +       + + D E    V+     + ++ E   + +KN+   +  
Sbjct: 234 TDEYYGIGLKKDDAEATKAVNEALNQLNSSGEFEKLVKKNLGDAAAG 280


>gi|291530246|emb|CBK95831.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Eubacterium siraeum 70/3]
          Length = 294

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 59/304 (19%), Positives = 112/304 (36%), Gaps = 35/304 (11%)

Query: 1   MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40
           M K  F  ++ L +        FT+ STNA+               L +IK  G +  G+
Sbjct: 1   MKKLNFKKLIALGLTAAAAVASFTACSTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
            +    F  V  NG+++G+D+ F   L   +  +   I Y+   A  R   L++ ++DI+
Sbjct: 61  FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELT 159
             N   T  R     + F         G +      I+S+ +  +   + V +GTT EL 
Sbjct: 118 LANFTVTEERAE--KVDFALPYMNVALGVVSPDSNVITSLDNWKAEDKMIVISGTTAELY 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L      +        ++      +A       A+  D + + A           V +  
Sbjct: 176 LT----KNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQ--NKGYTVGIDS 229

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
           + S+  +APA+ +G+    N ++     +    +      + +    DT   D +  L +
Sbjct: 230 LGSQDTIAPAVSKGNETLLNWINDEIKTL---GKENFFHADYDATLTDTYGADYKETLVV 286

Query: 280 DKSS 283
           +   
Sbjct: 287 EGGE 290


>gi|242239986|ref|YP_002988167.1| cationic amino acid ABC transporter periplasmic protein [Dickeya
           dadantii Ech703]
 gi|242132043|gb|ACS86345.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech703]
          Length = 259

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 96/279 (34%), Gaps = 29/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L+    T+       L D+ K   +K G +     F    A+G+  GFD
Sbjct: 1   MKKMLKLLPLALVFATGTA-------LADVPKN--IKIGTDPTYAPFESKNASGELVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKELCKRI---AANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V   +T E     Y++   +    + ++  
Sbjct: 107 KLYAANARLIAKKGSTIQPSVDSLKGKRVGVLQASTQEAYANQYWQPKGID--VVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R D    D  A     L  D    +      +    L        + + +
Sbjct: 165 DLIYADLTAGRIDTAFQDEVAGSEGFLKQDAGKAYAFAGPAVKDDKLFGVGTGMGLRKNE 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE    +    +A +            ++++K   + +V
Sbjct: 225 TELKVALDKA-FASIR------KDGTYDKLAKKYFDFNV 256


>gi|15596085|ref|NP_249579.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           PAO1]
 gi|107100346|ref|ZP_01364264.1| hypothetical protein PaerPA_01001371 [Pseudomonas aeruginosa PACS2]
 gi|116048812|ref|YP_792388.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218893143|ref|YP_002442012.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           LESB58]
 gi|254239241|ref|ZP_04932564.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           C3719]
 gi|254245175|ref|ZP_04938497.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           2192]
 gi|296390758|ref|ZP_06880233.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           PAb1]
 gi|313105771|ref|ZP_07792034.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           39016]
 gi|9946788|gb|AAG04277.1|AE004523_5 arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           PAO1]
 gi|2668595|gb|AAC71070.1| arginine and ornithine binding protein [Pseudomonas aeruginosa
           PAO1]
 gi|115584033|gb|ABJ10048.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126171172|gb|EAZ56683.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           C3719]
 gi|126198553|gb|EAZ62616.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           2192]
 gi|218773371|emb|CAW29183.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           LESB58]
 gi|310878536|gb|EFQ37130.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           39016]
          Length = 259

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+ +            ++ GI      F+    +G   GFD
Sbjct: 1   MKKLALLGALALSVLSLPTFAADKP----------VRIGIEAAYPPFSLKTPDGQLAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     + +++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  VDIGNALCEEM---KVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKR--SVDFTN 105

Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+M +   ++     L G    V  G+T +   +            + +   
Sbjct: 106 KYYNTPARFVMKEGASLNDPKADLKGKKAGVLRGSTADRYASAELTPAG--VEVVRYNSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E +    A R DA   D   L    L  D    +  +   ++ +         A+ +GD
Sbjct: 164 QEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLTDAKYFGEGVGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
           +E     +    A+
Sbjct: 224 SELAGKFNAAIDAL 237


>gi|291437322|ref|ZP_06576712.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291340217|gb|EFE67173.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 368

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 18/256 (7%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
               ++      +   I+ +G +K G +           +G   G D D   AL   +  
Sbjct: 95  TASTSAAPLADKLPQAIRDKGVVKVGSDIAYAPVEFKDDSGKTVGIDPDVAAALGKQLGV 154

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITY 123
                ++           L+SK+ DI       T  R+  +          G+ F    +
Sbjct: 155 K---FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDFVD-YF 210

Query: 124 FDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERV 179
             G      K   +GI + S L G  I VQ GT +E       +      K     F+  
Sbjct: 211 TAGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEAFDND 270

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++     RA   +A + D         T+   ++  ++ + +  +P   AI + +T+  +
Sbjct: 271 QQAQTRLRAGGANAGSSDFPVAAYAVKTSGGGNDFQLVGEQVEAAPYGIAIAKDNTQLRD 330

Query: 240 IVSWTHYAMVTAEELG 255
            +     A++   E  
Sbjct: 331 AIKAALDAIIENGEYQ 346


>gi|319940985|ref|ZP_08015322.1| amino acid ABC transport system periplasmic binding component
           [Sutterella wadsworthensis 3_1_45B]
 gi|319805558|gb|EFW02353.1| amino acid ABC transport system periplasmic binding component
           [Sutterella wadsworthensis 3_1_45B]
          Length = 258

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 9/222 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G       F     N +  GFD+D  +A++ A   D   ++++       F AL +
Sbjct: 26  TYTVGTGATYRPFEYEAPNKEIVGFDIDLMKAIAKAQGFD---VEFVNTTWSTIFPALNN 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              DI+      T  R+    + F    +   Q  +      I S+  L G  I V   +
Sbjct: 83  GDRDIIMSGITITDKRKE--AVDFSEPYFLAHQLILTSSNLQIKSLKDLEGKLIAVVNAS 140

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             ++  ++ F       +   F+              DA  GD+  L    +  +   + 
Sbjct: 141 AGDVAASNAFGKA--STNIRRFDNTPLALEELANGGVDAMIGDVGVLQ-WYMKQNPDKKF 197

Query: 215 VILPDIISKSPL-APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               D   +       + +G+T+  N V+     ++ +    
Sbjct: 198 NQCRDPEFQEQYFGIGVRKGNTQVLNDVNAGLKKVIESGAYN 239


>gi|311278729|ref|YP_003940960.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
 gi|308747924|gb|ADO47676.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
          Length = 260

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 89/279 (31%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L I   +S                ++ G +     F+   A GD+ GFD
Sbjct: 1   MKKTVLALSLLLGISSASSVFAALP--------HNVRIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QIKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + ++   +    + ++  
Sbjct: 108 KLYAADSRLIATKGSPIVPTIDSLKGKHVGVLQGSTQEAYANENWRTKGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E          A   A          ++++K   + +V
Sbjct: 226 VELKA-------AFDKALADLRKDGTYDKMAKKYFDFNV 257


>gi|170699413|ref|ZP_02890458.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170135669|gb|EDT03952.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 266

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 13/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S  A +L  +K+ G LK  +      F    A G  +GFDVD  +A+++ +   P   Q+
Sbjct: 24  SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138
           +          LQ+ + D++      T  R     L F     +     +  +       
Sbjct: 81  VTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVYSSAQLLQRQNDTRAFK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+ +L G  + V  G+     +              V+    E      A R DA   D 
Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + +  + N              +  +     +G+ ++   +    
Sbjct: 194 -LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239


>gi|257481840|ref|ZP_05635881.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289624459|ref|ZP_06457413.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289651580|ref|ZP_06482923.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298485183|ref|ZP_07003277.1| ABC transporter amino acid-binding protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298160295|gb|EFI01322.1| ABC transporter amino acid-binding protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|330866609|gb|EGH01318.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330886066|gb|EGH19967.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330986783|gb|EGH84886.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331009475|gb|EGH89531.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 261

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 10/244 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +    +A+ L D+  RG LK  +      F  V  +   +G D+D  + L+  +    
Sbjct: 17  MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++  P+N+  R   L + ++D++  +      RE    + F                 
Sbjct: 74  VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            +  ++ L G +I V  G   ++ L+              FE      AAY A + D   
Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                + A  ++   P     L   +  SP+   + +G  E    V     A      L 
Sbjct: 189 SGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246

Query: 256 ITQK 259
              +
Sbjct: 247 KASQ 250


>gi|241554227|ref|YP_002979440.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863533|gb|ACS61195.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 275

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 10/239 (4%)

Query: 1   MY-KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M        ++    L   + S   A  L  +K  G LK G  T    F  + A G+  G
Sbjct: 1   MKAHSLLKGLVGAAFLLGAAVSAHAADTLAAVKAAGTLKVGTETAFAPFDYIDA-GEHTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +VD    +   +      I+++ L     F AL++ + D+++     T  R       F
Sbjct: 60  LNVDLFAEIGKELGVK---IEWVALPWDGVFPALEAGKFDVVAGPATITKKR--MERYRF 114

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            P         +       IS    ++G +I V   T     L ++      K     + 
Sbjct: 115 TPPIAEATIAILKKAGDTTISKPEDIAGKTIGVGKATAQLDQLKEFSATLPTKVDVREYP 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E  A   A R       +  +     +  + +  V+LP    KS      ++    
Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVASQRKGTFEVVLPPFGKKSYFGFIGLKDADH 232


>gi|71733916|ref|YP_272590.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71554469|gb|AAZ33680.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 320

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 10/244 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +    +A+ L D+  RG LK  +      F  V  +   +G D+D  + L+  +    
Sbjct: 76  MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 132

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++  P+N+  R   L + ++D++  +      RE    + F                 
Sbjct: 133 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 190

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            +  ++ L G +I V  G   ++ L+              FE      AAY A + D   
Sbjct: 191 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 247

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                + A  ++   P     L   +  SP+   + +G  E    V     A      L 
Sbjct: 248 SGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 305

Query: 256 ITQK 259
              +
Sbjct: 306 KASQ 309


>gi|24112233|ref|NP_706743.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 301]
 gi|30062345|ref|NP_836516.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 2457T]
 gi|24051080|gb|AAN42450.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 301]
 gi|30040590|gb|AAP16322.1| arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2a str. 2457T]
 gi|281600186|gb|ADA73170.1| Arginine 3rd transport system periplasmic binding protein [Shigella
           flexneri 2002017]
 gi|313650230|gb|EFS14642.1| arginine-binding periplasmic protein 1 [Shigella flexneri 2a str.
           2457T]
          Length = 243

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEAPYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|290960317|ref|YP_003491499.1| extracellular transport-associated solute-binding protein
           [Streptomyces scabiei 87.22]
 gi|260649843|emb|CBG72959.1| putative extracellular transport-associated solute-binding protein
           [Streptomyces scabiei 87.22]
          Length = 350

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 14/232 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-----WKGFDVDFCRALSSAIFDDPSK 77
           + + +  IK  GF+  G++     +     N        +GFD+D  R ++  I  DP K
Sbjct: 87  SGTTIQRIKDNGFITVGVDQNSYRWGYRDPNAKDDGAQLEGFDIDIVRRIAKEILGDPDK 146

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           + +  +    R  AL+  ++D++ R    +  R     +AF    +  GQ  +  K   I
Sbjct: 147 VHFKAIPTSRRIPALRDGEVDMVVRTMTISCER--MDEVAFSQPYFRTGQQVLAPKSSTI 204

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNM----KYHPIVFERVEEIDAAYRAHRCDA 193
               +         A T+T LT     K            +      +     +  + DA
Sbjct: 205 KGYGKSLADKKICTAATSTALTALTAGKKSGEVPASTDISLQVPNQLDCLVRLQLGQVDA 264

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D +   +    +       +  +  +      A+     +    V+   
Sbjct: 265 VVTDGALAASQAAQDP---TVDLKGEPFTTEYYGVAMNLDAKDLVRRVNQVL 313


>gi|294631352|ref|ZP_06709912.1| arginine/ornithine binding protein [Streptomyces sp. e14]
 gi|292834685|gb|EFF93034.1| arginine/ornithine binding protein [Streptomyces sp. e14]
          Length = 320

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+ +G ++ G +          A+G   G D D   A+   +        +       
Sbjct: 61  ASIRDKGVIRVGSDISYAPVEFKDASGKVAGIDPDLADAMGKQLGVK---FDFQNGTFDA 117

Query: 88  RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMHKKKG- 136
               L+S + DI          R          ++  G+ F       G      K    
Sbjct: 118 LLTGLRSNRYDIAMSAMTDNKNRQDGVDPTTGKKVGEGVDFVD-YLQAGVSIYTRKGDTK 176

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDA 193
            I+S S L G  I V+ GT +E       K      K     F+  ++ +   R+   DA
Sbjct: 177 GIASWSDLCGKKIAVERGTVSEDLAKSETKKCPAGKKITIQAFDDNQQAETRLRSGGADA 236

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            + D         T+    +  I+ D +  +P   A+ + +T+  + +     A++ + E
Sbjct: 237 VSADFPVAAYAVKTSGGGKDFEIVGDQVEAAPYGIAVGKSNTQLRDALQAAMDAVIKSGE 296

Query: 254 LG 255
             
Sbjct: 297 YQ 298


>gi|51595707|ref|YP_069898.1| ABC transporter, periplasmic arginine binding protein artJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|170024949|ref|YP_001721454.1| cationic amino acid ABC transporter periplasmic binding protein
           [Yersinia pseudotuberculosis YPIII]
 gi|186894781|ref|YP_001871893.1| cationic amino acid ABC transporter periplasmic binding protein
           [Yersinia pseudotuberculosis PB1/+]
 gi|51588989|emb|CAH20607.1| ABC transporter, periplasmic arginine binding protein artJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|169751483|gb|ACA69001.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis YPIII]
 gi|186697807|gb|ACC88436.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis PB1/+]
          Length = 243

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L  + F++ +              L+   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATL--LSGMVFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S+ + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +    
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 TKLNKAIDAV 227


>gi|153011680|ref|YP_001372894.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563568|gb|ABS17065.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 264

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 93/280 (33%), Gaps = 34/280 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + I+  ++    +   +A           ++ G       F  +  +G  KGFD
Sbjct: 1   MLKQAKMGIIAALVAVCGALPAHAE---------EIRMGAEGAYAPFNYLDPSGQLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +  D     +          ALQSK+ DI++ +   T  R     ++F  
Sbjct: 52  IDVGNAICEKLKAD---CVWSANEWSGIIPALQSKKFDIMASSMAITESR--MQQVSFSD 106

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y++   F+  K+ G+   +     G  I  Q G+     L  +F  +       ++  
Sbjct: 107 PYYYNTMRFVALKELGLKDVTPESAKGKVIGTQTGSIAVDALQRFFPDN----EVKLYPT 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGD 234
           +EE        R D       AL           E      +L   +       A  + D
Sbjct: 163 LEEAFLDIENGRIDLLLESKFALSDWIKKGADCCEFVGNEFLLDGTLGA---GMAFRKDD 219

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            E    V+     ++          + +++S    + D++
Sbjct: 220 EELRMRVNKALAEII-------QDGSYDKISAKYFDFDIR 252


>gi|295836545|ref|ZP_06823478.1| arginine/ornithine binding protein [Streptomyces sp. SPB74]
 gi|197697328|gb|EDY44261.1| arginine/ornithine binding protein [Streptomyces sp. SPB74]
          Length = 324

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 86/261 (32%), Gaps = 23/261 (8%)

Query: 14  ILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
                +  +    L      +I+ +G +K G +           +G   G D+D   AL 
Sbjct: 46  AASAGTSKSAGDSLNAKLPKEIRDKGVIKVGSDIAYPPVEYKDKSGKVVGIDIDLADALG 105

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR----------EISLGLAF 118
             +       ++           L+SK+ D+       T  R          ++  G+ F
Sbjct: 106 KELGVK---FEFQNATFDTLLTGLRSKRYDLAMSAMTDTADRQNGVDGDTGKKVGEGVDF 162

Query: 119 RPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPI 174
               +  G        K +GI + + L G  I +Q GT +        K  A   K    
Sbjct: 163 VD-YFTAGVSIYTPKGKTQGIKTWADLCGKKIVLQRGTVSHDLAKAESKKCAGGKKIAIE 221

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++  ++     RA   DA + D         T+    +  ++ + +  +P   AI + +
Sbjct: 222 AYDNDQQAQTRLRAGGGDAGSSDFPVAAWAVKTSGGGKDFELVGEQVEAAPYGIAIAKSN 281

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
           T   + +     A++   E  
Sbjct: 282 TGLRDAIKSAMEAIIANGEYD 302


>gi|302521885|ref|ZP_07274227.1| secreted protein [Streptomyces sp. SPB78]
 gi|318060271|ref|ZP_07978994.1| arginine/ornithine binding protein [Streptomyces sp. SA3_actG]
 gi|318076289|ref|ZP_07983621.1| arginine/ornithine binding protein [Streptomyces sp. SA3_actF]
 gi|302430780|gb|EFL02596.1| secreted protein [Streptomyces sp. SPB78]
          Length = 324

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 84/242 (34%), Gaps = 18/242 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +I+ +G +K G +           +G   G DVD   AL   +     + ++       
Sbjct: 65  AEIRDKGVIKVGSDIAYPPVEYKDKSGKVVGIDVDLAEALGKELG---VRFEFQNATFDT 121

Query: 88  RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMH--KKK 135
               L+SK+ D+       T  R          ++  G+ F    +  G        K +
Sbjct: 122 LLTGLRSKRYDLAMSAMTDTADRQNGVDGDTGKKVGEGVDFVD-YFTAGVSIYTPKGKTQ 180

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           GI + S L G  I +Q GT +        K  A   K     ++  ++     RA   DA
Sbjct: 181 GIKTWSDLCGKKIVLQRGTVSHDLAKAESKKCAGGKKIAIEAYDNDQQAQTRLRAGGGDA 240

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            + D         T+    +  ++ + +  +P   AI + +T   + +     A++   E
Sbjct: 241 GSSDFPVAAWAVKTSGGGKDFELVGEQVEAAPYGIAIAKSNTRLRDAIKAAMDAIIANGE 300

Query: 254 LG 255
             
Sbjct: 301 YD 302


>gi|116333853|ref|YP_795380.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           brevis ATCC 367]
 gi|116099200|gb|ABJ64349.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus brevis ATCC
           367]
          Length = 280

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 18/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K   +  L  + +  +            +  A     +K++  +  G++   V     
Sbjct: 1   MKKGLRIWALLAVCIGLSGLLAGCRTVTQRANTADTWSKVKQQKKVVVGLDDSFVPMGFR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G   G+D+D  RA+         K+ +  ++       L +  ID++      T  R
Sbjct: 61  QKSGKLVGYDIDLARAVFKLYG---IKVDFQTIDWNMNVTELHNGTIDLIWNGFSITPQR 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F     ++ Q  +  KK  I S + + G  +  Q G++    +  Y K    +
Sbjct: 118 QKQAA--FSDTYLYNDQVLVTLKKNKIKSFADMQGKVLGAQTGSSGANDIDTYPKLLKNR 175

Query: 171 Y---HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + ++            R      D +           P  + +    + K   A
Sbjct: 176 IKNHEAVTYDSFTNAFIDLNVGRIQGLLIDSTYANYYIKHQAHPENYRVTTGALPKEKFA 235

Query: 228 PAIIQGDTEWYNIVSWTHY 246
             + +GD    + ++    
Sbjct: 236 VGMRKGDVTMRHKINAGLK 254


>gi|256843605|ref|ZP_05549093.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           crispatus 125-2-CHN]
 gi|312984334|ref|ZP_07791676.1| CjaA protein [Lactobacillus crispatus CTV-05]
 gi|256615025|gb|EEU20226.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           crispatus 125-2-CHN]
 gi|310894259|gb|EFQ43339.1| CjaA protein [Lactobacillus crispatus CTV-05]
          Length = 288

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 108/299 (36%), Gaps = 42/299 (14%)

Query: 1   MYKDFF---VSILCLIILFFTS----------FSTNASIL------GDIKKRGFLKCGIN 41
           M K  F   ++IL ++++               + +            IK+RG+L+  + 
Sbjct: 1   MAKKIFNWIMAILFVVVVLVAGYIGISRPGINGTASEDRWNSENNVSSIKRRGYLRIAVF 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
             L  +  V + G   G+DV   R ++  +   P   +++ +NA  R   L S + DI+ 
Sbjct: 61  GDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVL 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+     ++         G I  K   +++  QL G S+ V  GTT E    
Sbjct: 118 ANFTLTPERKSV--ASWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAENYFT 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                     + + F+   +   A +  R  A   D S LYA       P   V +  I 
Sbjct: 176 -----KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIG 228

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
               ++ A+ +G+      +              IT+ N         N +++ + G +
Sbjct: 229 PNQYISGAVKKGNKSLQKWMDR-----------EITKLNRESFFTYDYNKELKPYFGKE 276


>gi|170683333|ref|YP_001744510.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli SMS-3-5]
 gi|170521051|gb|ACB19229.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli SMS-3-5]
          Length = 260

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    D +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKALN------ELRQDGT-YDKMAKKYFDFNV 257


>gi|319792874|ref|YP_004154514.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315595337|gb|ADU36403.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 265

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 76/240 (31%), Gaps = 10/240 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +   +A  + DIKK+G +  G+      +    A     G+D D  + L+       
Sbjct: 21  TVFAPFASAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYDADVAKLLAKD---WG 77

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K   +P+    R   L + ++D+L  +   T  R   +   F               K 
Sbjct: 78  VKANIVPVTGPNRIPFLLTNKVDLLVASLAVTPERAKQVQ--FSQPYAAATIVLYGATKT 135

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I + + L G  + V   +T ++ +               F+       A  + + DA  
Sbjct: 136 PIKAATDLKGLRVGVARASTQDVAVTKAAPE---GTEIRRFDDDASAMQALISGQVDAI- 191

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              S   A ++    P+        + +  +  A+  G  E    V+          EL 
Sbjct: 192 -GCSVTVAAQIAKRVPAGTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQKNTANGELN 250


>gi|237815293|ref|ZP_04594291.1| extracellular solute-binding protein [Brucella abortus str. 2308 A]
 gi|237790130|gb|EEP64340.1| extracellular solute-binding protein [Brucella abortus str. 2308 A]
          Length = 293

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 60  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 116

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 117 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 174

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 175 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 230

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 231 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 270


>gi|145592208|ref|YP_001154210.1| extracellular solute-binding protein [Pyrobaculum arsenaticum DSM
           13514]
 gi|145283976|gb|ABP51558.1| extracellular solute-binding protein, family 3 [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 282

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 95/290 (32%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFF------------TSFSTNASI---------LGDIKKRGFLKCG 39
           M       +  ++ L              T+ +T  S          +  IKKRG L  G
Sbjct: 1   MKSTILAVVALVVGLIAGYLVGMYSAPKPTAPATQTSTPAAAQCPVSVDIIKKRGKLILG 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +     +  V AN  + G+D+D  R ++ A+  +   ++   +       A++   +D+
Sbjct: 61  TDATWPPWEWV-ANNTFVGWDIDIAREIAKALGVE---LEIRDMRFAGLLEAVRKGDVDL 116

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTEL 158
                 WT  RE    L F    Y +    +    +  I+ V  L G  + VQ GTT + 
Sbjct: 117 ALSAITWTTEREKV--LEFSMPYYLESIVIVTKTSRNDINKVEDLYGKKVGVQIGTTHDE 174

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
                 +           +    +    R    DA   D S   AL            LP
Sbjct: 175 WSTTNLEKPGKASVSRYDKVYPYMVEVLRRGDVDAIILDRSIATALVRKFPDLKIAFELP 234

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKD 267
                  ++ A+ +   +   +V      ++   +L  I QKN     K 
Sbjct: 235 GSAG--YISVAMPKCAQDLKLVVDQVIENLIQTGKLDEIMQKNFELFLKS 282


>gi|116619008|ref|YP_819379.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097855|gb|ABJ63006.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 288

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 20/253 (7%)

Query: 4   DFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
              ++ + ++ L + + +      +   L  ++K G +  G+ +    F  +    G  K
Sbjct: 14  TIVLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTKTGVSK 73

Query: 58  GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           GFDVD  +AL+  I      P   +++P+++  +   L++  ID        T   E   
Sbjct: 74  GFDVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITP--EREK 131

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYH 172
            + F    +  GQ  ++ K  GI S+  ++     I V  GTT       +         
Sbjct: 132 IIDFTNQYFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTAAEETKKFAPKAK---- 187

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +       A +A +  A + D + LY      + P ++ I+    +  P   A   
Sbjct: 188 LLAVQDYATGMQALKAGQGQAMSTDNAILYGFAT--ENP-DYQIVGGTFTHGPYGIAFDN 244

Query: 233 GDTEWYNIVSWTH 245
                    +   
Sbjct: 245 NQGPMVRETNKAL 257


>gi|307703651|ref|ZP_07640593.1| arginine-binding periplasmic protein 1 [Streptococcus oralis ATCC
           35037]
 gi|307623058|gb|EFO02053.1| arginine-binding periplasmic protein 1 [Streptococcus oralis ATCC
           35037]
          Length = 259

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 82/245 (33%), Gaps = 14/245 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDF 63
           +    +++   +   ++ S +  IK++G L    +     F     V       G D+D 
Sbjct: 1   MLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKNQVVGADIDM 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +A++  +      ++   ++      +LQ+ + D+       T  R+      F    Y
Sbjct: 61  AQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV--FDFSIPYY 115

Query: 124 FDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +   F++ K        +S L+ A+I  Q GT  E  + +           I    + E
Sbjct: 116 ENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQLISLTNMGE 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                +A + DA   D     +    N       +   +      A AI +  ++   +V
Sbjct: 172 AVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKKDQSDLKAVV 231

Query: 242 SWTHY 246
                
Sbjct: 232 DKVIQ 236


>gi|27379088|ref|NP_770617.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27352238|dbj|BAC49242.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 265

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 14/247 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F      + +       +A  L D+   G L+ GI T    +      G+  G D D
Sbjct: 5   KSLFAIAATALAVLAAPNLAHADKLQDVLGSGKLRVGILTDAAPWGFKDDKGEIAGLDAD 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R +++ +      ++ +P+    R  +L S +ID+L      T  R  +  + F    
Sbjct: 65  LARLIAADMGVK---LELVPVTGAARIPSLLSDKIDMLIAGLGATPER--AQQVMFSQPY 119

Query: 123 YFDGQGFIMHKKKGISS---VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                G    K    ++      L G S+ V  G+T ++ L D           + FE  
Sbjct: 120 AVVNLGVYGAKSLPSATSKKPDNLDGRSVAVAKGSTLDVWLTDNAPK----VKLVRFEDT 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AA+ A + D +  + +   ALK+ +  P++ V L  +I +SP    + QG+    N
Sbjct: 176 PAALAAFLAGQADTFAENSAI--ALKVQDQNPTKEVELKFLIRQSPAHVGVRQGEQNLLN 233

Query: 240 IVSWTHY 246
            ++   +
Sbjct: 234 WINTDIF 240


>gi|326790342|ref|YP_004308163.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
           5427]
 gi|326541106|gb|ADZ82965.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium
           lentocellum DSM 5427]
          Length = 280

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 98/278 (35%), Gaps = 30/278 (10%)

Query: 1   MYK---DFFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVGF 47
           M K       ++L + +L             +  +    +  IK  G LK G    +  F
Sbjct: 1   MKKGIKKIMATLLAVTMLGVLGSCTKTETSEAGGSATGGIQKIKDAGVLKVGCKIDVPSF 60

Query: 48  AEVK-ANGDWKGFDVDFCRALSSAIF-------DDPSKIQYLPLNAKERFLALQSKQIDI 99
                A G+++G ++D    ++  IF        +   + +  + AK R   L S +ID+
Sbjct: 61  GLQNTATGEYEGVEIDLAYEIAGKIFDCTAAEAKEKKLVAFQGVTAKTRGGLLDSGEIDL 120

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +      T  R+      F    Y D  G ++ K  GI S++ L G  I V  G+ T+  
Sbjct: 121 VIATFTVTEERKE--SWNFSTPYYTDAVGLMVLKDSGIQSINDLDGKIIGVSQGSITKDG 178

Query: 160 LADYFKAHNMKYHPI--VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
              Y K   +   P+   F+    +  A      D +  D + L             +IL
Sbjct: 179 FEAYIKETGINVTPVFEEFDGYPALSTALSTKNIDVFAVDRAILAGY-----SDDSTMIL 233

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D  ++     A    + E    V      +V + ++ 
Sbjct: 234 EDRFAEQDYGVASALSNKELAETVDGVVKGLVDSGKMA 271


>gi|294852215|ref|ZP_06792888.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|294820804|gb|EFG37803.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
          Length = 285

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 52  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 108

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 109 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 166

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 167 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 222

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 223 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 262


>gi|163843133|ref|YP_001627537.1| extracellular solute-binding protein [Brucella suis ATCC 23445]
 gi|163673856|gb|ABY37967.1| extracellular solute-binding protein family 3 [Brucella suis ATCC
           23445]
          Length = 293

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 66/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 60  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 116

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 117 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 174

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 175 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 230

Query: 213 EH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                     D I    +  A  +G  E     +    A+
Sbjct: 231 CKTVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 270


>gi|323525063|ref|YP_004227216.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323382065|gb|ADX54156.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 267

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 82/229 (35%), Gaps = 11/229 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            TS + +A  L +I K G LK  +      F  V  +   +G+D+D    L+ ++     
Sbjct: 25  MTSPAVHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTAALLAKSM---NV 81

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K++ +P+N+  R   LQ+ ++D++  +   T  RE    + F        QG        
Sbjct: 82  KLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKV--IDFSTAYAPYYQGVFGPADIK 139

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +S  + L+G ++    G   EL L               FE      AA+ + +      
Sbjct: 140 VSGPADLTGKTVGATRGALEELGLTQMAP----NATIKRFEDNNATIAAFLSGQVQLIAA 195

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 A+      P        +I  SP    + + +      V+   
Sbjct: 196 GNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVNAAI 242


>gi|261365992|ref|ZP_05978875.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria mucosa ATCC 25996]
 gi|288565423|gb|EFC86983.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria mucosa ATCC 25996]
          Length = 276

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 81/227 (35%), Gaps = 10/227 (4%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K     +   N     F  + + G+ +GFDVD   A++ A      K+++        F 
Sbjct: 34  KADKVYRVAANAEFAPFESLDSAGNVEGFDVDLMNAMAKAGG---FKVEFKHQPWDSLFP 90

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SIC 149
           AL++   DI+      T  R+    + F    +   Q  ++ K K ++S   L     + 
Sbjct: 91  ALKNGDTDIVISGVTITDERK--QSMDFTDPYFEITQVVLVPKGKKVASSDDLKNMAKVG 148

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  G T + +++      N       FE V  +         DA   D + +      N 
Sbjct: 149 VVTGQTGDFSVSKLLG--NDNPKIARFESVPLVIKELENGGVDAVVSDSAVIANYVKNNP 206

Query: 210 -RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +  + + LPD  +      A  +GD     +++     +  + E  
Sbjct: 207 TKSMDFITLPD-FTIENYGIAARKGDEATIKMLNEALKKVRDSGEYD 252


>gi|251797220|ref|YP_003011951.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
 gi|247544846|gb|ACT01865.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
          Length = 313

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 70/232 (30%), Gaps = 13/232 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  + + + L  IK  G +  G       F     +G   GFDV+    ++  I      
Sbjct: 74  SGNAASDNSLKAIKSSGEITIGTEGTYAPFTFHDKSGKLTGFDVEIAEEIAKRIGVKA-- 131

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKG 136
            +++          L +K+ D+++         +      F           I+      
Sbjct: 132 -KFVETKWDGMLAGLDAKRFDMVANEVTI--RDDRKAKYDFSDPYILSKAVLIVKESNTN 188

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+S L G         +    L D  KA+      +  +   +      + R DA   
Sbjct: 189 IKSLSDLKGKKSG----QSLTSDLGDIAKANG--AQLVAVDGFNQAIDLLTSGRIDATIN 242

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           D  +   LK          ++ +    S       +G  E  + VS     M
Sbjct: 243 DKLSYLDLKKARPD-VPIKVVAETDQVSQSGMLFRKGSKELVDAVSNAIKDM 293


>gi|153011031|ref|YP_001372245.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562919|gb|ABS16416.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 253

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 81/248 (32%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         K+   ++         F  V A+G  +G D
Sbjct: 1   MLKAILFAGVASVIAALPAQA---------KEWKEIRIATEGAYPPFNFVAADGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VEIANALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSITEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G S+  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVSKDSPITSLDAEAFKGKSVGAQGSTTQGNYAEDVYGKAGAD--VKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  +  R DA   D   +      +      +I     +++    A+ QGD +  
Sbjct: 165 ADEANADLKNGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTGIALRQGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|330718494|ref|ZP_08313094.1| amino acid ABC transporter periplasmic protein [Leuconostoc fallax
           KCTC 3537]
          Length = 265

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 15/235 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75
             S + +      IK++  +  G+      F  +    G+++GFDVD  RA++  I  D 
Sbjct: 10  GASEAKHVDTFDRIKEQHRIVWGVKADTRLFGLMNTKTGEYEGFDVDIARAVTKQIAKDQ 69

Query: 76  S---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +   K + + +++  +   L++  ID  +     T  RE    + F    +  GQ  ++ 
Sbjct: 70  NIKLKAELVQVSSSSKIQLLKNANIDATASVMTITKERE--NQVDFTQPYFPAGQSLLVK 127

Query: 133 KKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           +   I SV  L   G ++    GTT   T+ ++          +      +   A +A +
Sbjct: 128 ENSDIRSVKDLNQPGRTVIGAVGTTAIPTMKEFAPK----VRVLSLADYAQSMTALKAGQ 183

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA T D + LY L   N     + I+    +  P   A           ++   
Sbjct: 184 GDALTTDNAILYGLAQQNPG---YKIVGGNFTNQPYGLATDNDQPRMIAAMNKAL 235


>gi|322411346|gb|EFY02254.1| glutamine-binding protein precursor [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 266

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 97/222 (43%), Gaps = 11/222 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           ++L  I K+G L+ G+   +  F         ++G ++D  + ++ A+   P   Q+  +
Sbjct: 30  NVLKQITKKGQLRIGVKQDVPNFGYYHPKHRQFEGMEIDIAKKIAKALDVKP---QFTAV 86

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A+ R   L ++Q+D++      T   E     AF    Y D  GF++ K   I+S+ +L
Sbjct: 87  TAQTREALLDNQQLDMIIATYTITP--ERQKQYAFSNPYYLDEIGFLVKKSDAITSIKEL 144

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +  +I V  G+TT+  + +Y KAH++ +  +      E+  +  A+R  +++ D S L  
Sbjct: 145 NQKTIGVAQGSTTKNAIEEYGKAHDLSFSFVQLGSYPELAISLYANRIASFSVDKSILSG 204

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                       IL +  ++     A  + +      ++   
Sbjct: 205 YTNQKT-----TILTEGFNQQAYGVATTKSNKALITHINKLL 241


>gi|303256727|ref|ZP_07342741.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|330999369|ref|ZP_08323086.1| ABC transporter, substrate-binding protein, family 3
           [Parasutterella excrementihominis YIT 11859]
 gi|302860218|gb|EFL83295.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|329575227|gb|EGG56778.1| ABC transporter, substrate-binding protein, family 3
           [Parasutterella excrementihominis YIT 11859]
          Length = 255

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 80/255 (31%), Gaps = 18/255 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + +   + +      +                 G       F       +  GFD
Sbjct: 3   MKKLLWTACAAIALTASAGINAE-----------EYVVGTGATYRPFEYETPQKELVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++ A   D   ++++    +  F  +     DI+      T  R+    + F  
Sbjct: 52  VDLMRAIAKAEGFD---VKFINTPWEGIFATVDKGDRDIIMSGITITDKRK--QVVDFSK 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  +  K   I+ +S LS  S+ V +G+  ++  +  F           F+   
Sbjct: 107 PYFLAHQLILTDKSVKINKLSDLSKGSVAVVSGSAGDVAASKAFGKA--STRIRRFDNTP 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                       A  GDI  L      N     ++       +     A+ +G+ +  + 
Sbjct: 165 LALEELNQGGVVAAIGDIGVLAFYARNNPDKHFNMTRDPAFEEQYFGIAVKKGNQKLIDK 224

Query: 241 VSWTHYAMVTAEELG 255
           ++     ++ + E  
Sbjct: 225 INAGLEKVIASGEYN 239


>gi|224825589|ref|ZP_03698694.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
 gi|224602510|gb|EEG08688.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
          Length = 256

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 26/255 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +   ++L   S    A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK-----LAACLMLSLASVGAFA------KDWKVIRFGVDASYAPFESKAADGKLVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 50  VDLGNAICEKL---KAKCVWVENDFDGMIPALKAKKFDGILSSLSVTEKRAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K    + +   L    I V+ GTT E     Y++      + + ++  
Sbjct: 105 KLFNAPVRMVAKKGSNLLPTAESLKSKRIGVEQGTTQETYAKAYWEPKG--VNVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233
             + A   + R DA   D        L   +  +         K P       A  + + 
Sbjct: 163 SLVLADLGSGRLDAALQDAVQADIGFLKTPQGRDFAFAG-PELKDPKTLGTGTAIGLRKD 221

Query: 234 DTEWYNIVSWTHYAM 248
           D +    V+    A+
Sbjct: 222 DADLRQQVNQALAAI 236


>gi|77461680|ref|YP_351187.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77385683|gb|ABA77196.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 261

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 81/241 (33%), Gaps = 10/241 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
              +A  L D+ KRG LK  +      F  V  +   +G D+D  + L+  +     K++
Sbjct: 21  APAHADGLDDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKLLAEQL---KVKLE 77

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P+N+  R   L + ++D++  +      RE    + F                  +S+
Sbjct: 78  LTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFSRAYAPFYLAVFGPPDAAVST 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  L G +I V  G   ++ L               FE      AAY A + D       
Sbjct: 136 LDDLKGKTISVTRGAIEDIELTKVAPE---GVTIKRFEDNNSTIAAYLAGQVDLIASGNV 192

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            + A  ++   P     L   +  SP+   + + +      V+           L    +
Sbjct: 193 VMVA--ISEKNPKRVPALKVKLKDSPVYVGVNKNEPALLGKVNEILTTAKADGALEKNAQ 250

Query: 260 N 260
            
Sbjct: 251 T 251


>gi|307709177|ref|ZP_07645636.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis SK564]
 gi|307620123|gb|EFN99240.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus mitis SK564]
          Length = 279

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 8/229 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +           +++G +  G +   V     + NG + GFD+D  +A+S  +     K+
Sbjct: 25  ASDPKQDNWNKYQEQGSITIGFDNTFVPMGFEEKNGQYTGFDIDLAQAVSEKLG---FKV 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           Q+ P++   +   LQ+  ID +      T  R     +AF      + Q  +  K + I 
Sbjct: 82  QFQPIDWDMKETELQNGTIDAIWNGYSATNER--REKVAFSIPYMENQQVLVAKKSQQIH 139

Query: 139 SVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           SV ++   ++  QAG++  L      D  K          ++   E     +  R DA  
Sbjct: 140 SVEEMKDKALGAQAGSSGYLDFEAQPDLLKNRVKDQKANQYQSFNEALIDLKNDRIDALL 199

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            D         +    +++ +          A  +   D      ++  
Sbjct: 200 IDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPADKRLLQALNQA 248


>gi|317053673|ref|YP_004118807.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316952778|gb|ADU72251.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 270

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 11/246 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F + + L  L FT+ + +      +   G L+         +    A+G + GFDV+F 
Sbjct: 10  LFGAAIALCSLSFTTLAASQDNPWGLLSPGHLRVASVGDSKPYTFTDASGQFTGFDVEFF 69

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +  D  ++ ++  +      A+ + Q D        T  RE +  + F      
Sbjct: 70  KNVAHRMGID--QVDFVGQDFSAILPAVANGQFDAGVAAIGITPAREKT--VDFSTGYLA 125

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                +     G+++V  L+   + V  GT  E     +F     +   + F       +
Sbjct: 126 GYLTVLTRSDSGVTNVETLAKHRLGVIQGTLQESYAVQHF----TQTDIVRFPDNNTAVS 181

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A      DA   D     A K    R             +P   AI +    +   +   
Sbjct: 182 ALNNSTLDAVFLD---YEAAKSYAGRFKLVSAADIPSFNAPAGVAIAKDKPAFKAALDKA 238

Query: 245 HYAMVT 250
             A + 
Sbjct: 239 IKAAMQ 244


>gi|325265329|ref|ZP_08132054.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium sp. D5]
 gi|324029508|gb|EGB90798.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium sp. D5]
          Length = 282

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 79/267 (29%), Gaps = 27/267 (10%)

Query: 1   MYKDFFVSIL-----CLIILFFTSFSTNASILGDIKKRGF-------------LKCGINT 42
           M +   +++         +    S + +       K                    G + 
Sbjct: 1   MKRKIALAMAAALVLTTALAGCGSKAEDTKSDDSAKDNKKTEAVSEEKSEGDSFTVGFDA 60

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               +      G++ GFD+D  + +      +  K    P++   + + L S  ID +  
Sbjct: 61  SFPPYGYKDEEGEYVGFDLDLAQEVCDRNGWELKK---QPIDWDAKDMELSSGTIDCIWN 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
                   +      +      + Q  ++ +  GI S+  L+G  + VQA ++    L +
Sbjct: 118 GFTMNGRED---DYTWSDPYVDNSQVVVVAEDSGIKSLEDLAGKLVEVQADSSALTALQE 174

Query: 163 YFKA-HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             K   +                   A   +A   D     A      R   ++ L + I
Sbjct: 175 DQKELADTFGQLTQVPDYNTAFMDLEAGAAEAVAMD--VGVAKYQIESRGGGYITLDETI 232

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           S         +G+ +  + V  T   M
Sbjct: 233 SSEQYGIGFKKGNEKLRDQVQKTLDEM 259


>gi|302336896|ref|YP_003802102.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634081|gb|ADK79508.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 249

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 89/253 (35%), Gaps = 28/253 (11%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD-WK 57
           M +    ++ + L+ L         S+L   +++  L  G N     F  +  A+G+   
Sbjct: 1   MKRIATLLTAIALVALL--------SVLSGCQEKNELVMGTNAAFPPFEYIGGADGNAVV 52

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+  +A++         ++   +       AL + +ID        T  RE    + 
Sbjct: 53  GFDVEIAKAIAEKAGK---TLRIEDMEFDSLLTALNADKIDFAIAGMTITDEREK--SVD 107

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y   Q  I+ K    IS+   L+G  I VQ GTT      +  K      + + F
Sbjct: 108 FSDPYYEATQAVIVRKADNPISTKDDLNGKKISVQLGTTG----NEIAKEFTDDSNIVAF 163

Query: 177 ERVEEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QG 233
               E     +  + DA    +  A   ++      S+  I+           A+   + 
Sbjct: 164 NTGFEAIMELKNGKVDAMIIDEQPAQNFIRQN----SDLEIVSLDFDPEYYGIAVKEGKS 219

Query: 234 DTEWYNIVSWTHY 246
             E   I++ T  
Sbjct: 220 SEELLPIINETLK 232


>gi|256059176|ref|ZP_05449385.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella neotomae 5K33]
 gi|261323128|ref|ZP_05962325.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261299108|gb|EEY02605.1| extracellular solute-binding protein [Brucella neotomae 5K33]
          Length = 253

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADRCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|260889730|ref|ZP_05900993.1| amino acid ABC transporter, amino acid-binding protein
           [Leptotrichia hofstadii F0254]
 gi|260860336|gb|EEX74836.1| amino acid ABC transporter, amino acid-binding protein
           [Leptotrichia hofstadii F0254]
          Length = 215

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 15/216 (6%)

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                  G+  GFD+D  +A++  +    S++++ P+N   + L L    ID++      
Sbjct: 1   MGFKDEKGEIVGFDIDLAKAVAQKLG---SEVEFKPINWDSKILDLNGGNIDLIWNGLTI 57

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R+    +      +   Q  ++     I++ + L+G ++  Q  ++ E  +      
Sbjct: 58  TEERKKETEM--TKPYFTSHQLIVVKAGSSINTKADLAGKNVGSQTESSGEEAVKKSGDD 115

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISK 223
              K     + + ++      A R DA   D       K T +   +   + IL D   +
Sbjct: 116 KKFK-EFKTYAQYDQAFMDLDAGRVDAIIADEVLAKYTKKTKETQAKKELYQILNDNYGE 174

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                A  +G+T+    ++         EEL     
Sbjct: 175 EEYGIAAKKGNTKLIEAINKAI------EELKADGT 204


>gi|262394743|ref|YP_003286597.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
 gi|6691543|dbj|BAA89348.1| unnamed protein product [Vibrio alginolyticus]
 gi|262338337|gb|ACY52132.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
          Length = 256

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K + +  +
Sbjct: 16  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCKIVAQD 72

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +     L 
Sbjct: 73  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 129

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 130 GKKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 187 VLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232


>gi|302671821|ref|YP_003831781.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio
           proteoclasticus B316]
 gi|302396294|gb|ADL35199.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio
           proteoclasticus B316]
          Length = 303

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 107/313 (34%), Gaps = 45/313 (14%)

Query: 1   MYKDFF------VSILCLIILFFTSFSTNASI------------------------LGDI 30
           M K+ F      ++   L+    T   ++ S                         L +I
Sbjct: 1   MKKNLFTKSAGVITAATLVGASITGCGSSVSTASASDAQAQAETAEAPASSEVYRTLDEI 60

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+ G +  G+ +    F  V  NG++ G+DV F   +   +      I Y+   A  R  
Sbjct: 61  KESGTINIGVFSDKSPFGYVDENGEYAGYDVYFAERIGQDLGVK---INYVSTEAANRIE 117

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASIC 149
            LQ+ ++DI+  N   T  R  +  + F         G +      I S+  + +   I 
Sbjct: 118 YLQTGKVDIILANFTVTEER--AQEVDFALPYMNVALGVVSPSDAVIDSLDNVGADDEII 175

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V +GTT E  L      +        ++   E   A        +  D + + A  +  +
Sbjct: 176 VISGTTAETYLE----KNYPDIKLQKYDAYAEAKTAIENGNAAGWANDNTEVIAFAI--E 229

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                V +P +     +APA+ +G+    N ++    A+    E      +      DT 
Sbjct: 230 NEGFTVGVPSLGDSDTIAPAVTKGNETLLNWLNDEIKAI---GEENFFHADYEATLLDTY 286

Query: 270 NPDVQRFLGIDKS 282
             D +  L ++  
Sbjct: 287 GADYEDTLVVEGG 299


>gi|104781755|ref|YP_608253.1| amino acid ABC transporter periplasmic binding protein [Pseudomonas
           entomophila L48]
 gi|95110742|emb|CAK15455.1| putative amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas entomophila L48]
          Length = 250

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 20/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V   C + L   + +              L+         F  V AN    GFD
Sbjct: 1   MKRTMAVVGACALWLAGNASAE------------TLRFATEGAYPPFNYVDANNQLHGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  + +    AL +++ D +  +   T  R     +AF  
Sbjct: 49  IDITHALCEQMKVE---CTLVAQDWEGIIPALMARKYDAVVASMIDTQERRK--KIAFTD 103

Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y       + K   IS       G ++  Q+ +T  +   D +          ++  +
Sbjct: 104 HYYRTPLTVAVAKDSKISDAQTDFKGYTVGAQSSSTQAIYAEDVYGKAG--AEVKLYPTM 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E +A   A R D    D   L+     N +    ++     +K+  A A+ + D     
Sbjct: 162 DEANADLAAGRLDGVIADKFPLHEWLSKNGQDCCKILGDVANTKADAAIAVRKEDEALRA 221

Query: 240 IVSWTHYAMVT 250
            ++    A+V 
Sbjct: 222 RLNEALAAIVA 232


>gi|299820599|ref|ZP_07052489.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Listeria grayi DSM 20601]
 gi|299818094|gb|EFI85328.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Listeria grayi DSM 20601]
          Length = 273

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 8/226 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             +     IKK   +  G++   V            GFDVD  +A+         K+++ 
Sbjct: 24  AGSDRWTAIKKEKEIVVGLDDTFVPMGFRDKKDKIIGFDVDLAKAVFKEYG---IKVKFQ 80

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P++   +   L+++ ID++         R     +AF      + Q  +  KK  I S +
Sbjct: 81  PIDWTLKETELKNESIDLIWNGYTVNKERAE--KVAFSQPYMKNEQVLVTLKKNNIRSFA 138

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            + G  +  Q G +    +A   +          P +++   +       +R D    D 
Sbjct: 139 GMKGKLLGAQNGASALDDMAKQPEVLTNIIKNKQPELYDSFNDAFIDLNNNRIDGLIIDN 198

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                +       +++ I       +  A  + + D      V+  
Sbjct: 199 VYARYIIAKQKNRADYRITTGGFKPADFAVGMRKTDKTLKKKVNQA 244


>gi|225627351|ref|ZP_03785388.1| extracellular solute-binding protein [Brucella ceti str. Cudo]
 gi|254693596|ref|ZP_05155424.1| extracellular solute-binding protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254701627|ref|ZP_05163455.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513]
 gi|254706927|ref|ZP_05168755.1| extracellular solute-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|254709965|ref|ZP_05171776.1| extracellular solute-binding protein [Brucella pinnipedialis B2/94]
 gi|254730145|ref|ZP_05188723.1| extracellular solute-binding protein [Brucella abortus bv. 4 str.
           292]
 gi|256044536|ref|ZP_05447440.1| extracellular solute-binding protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256060967|ref|ZP_05451125.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|256113396|ref|ZP_05454250.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256159584|ref|ZP_05457346.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|256369290|ref|YP_003106798.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           microti CCM 4915]
 gi|260168592|ref|ZP_05755403.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           sp. F5/99]
 gi|297248211|ref|ZP_06931929.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|225617356|gb|EEH14401.1| extracellular solute-binding protein [Brucella ceti str. Cudo]
 gi|255999450|gb|ACU47849.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           microti CCM 4915]
 gi|297175380|gb|EFH34727.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|326408881|gb|ADZ65946.1| extracellular solute-binding protein [Brucella melitensis M28]
 gi|326538598|gb|ADZ86813.1| extracellular solute-binding protein family 3 [Brucella melitensis
           M5-90]
          Length = 293

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 60  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 116

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 117 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 174

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT        F           +   EE        R DA   D   L     T D   
Sbjct: 175 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 230

Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D I    +  A  +G  E     +    A+
Sbjct: 231 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 270


>gi|118592146|ref|ZP_01549539.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Stappia aggregata IAM 12614]
 gi|118435118|gb|EAV41766.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Stappia aggregata IAM 12614]
          Length = 277

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 86/249 (34%), Gaps = 13/249 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M      ++L    +  ++    A     +   IK++G ++ G+      F     +G  
Sbjct: 1   MTLRSVGALLIAATIAGSAVPAMAQEFPPLPEMIKEQGKIRIGVKCDSPPFGATGVDGKP 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G +V+  + +    F      +   + ++ R  +L S ++D++         RE    +
Sbjct: 61  MGIEVEMAKKIGEFAFGSEDGAELSCVTSEARISSLNSGKLDLILATLGRFPAREEV--I 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  I ++     ++ K   +  +S L G ++ +  G +    L +           +  
Sbjct: 119 DFSNIYFWGTSNVLVQKDSPVQKLSDLEGKTLLIVKGGSQIKWLEENIP----DIEMMQL 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               +   A    R + + GD   +Y L        +  ++ + +        + +G+ E
Sbjct: 175 NTTADGVQALIQGRAEGFVGDGGLIYTL---GGNYEDLRVVEEGLDLGVNGIGLRKGEPE 231

Query: 237 WYNIVSWTH 245
               V+   
Sbjct: 232 LKAFVNAAL 240


>gi|254471566|ref|ZP_05084968.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Pseudovibrio sp. JE062]
 gi|211959712|gb|EEA94910.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Pseudovibrio sp. JE062]
          Length = 278

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 86/260 (33%), Gaps = 20/260 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    + L +        +     L  I K   L  G N+     A +  +   +GFD+D
Sbjct: 7   KAIIGAALFVSASVVGLSAQAGEALDAIMKNKTLVVGSNSDYRPNAFMGDDNQLQGFDID 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +  D   +Q++    +         +  ++  +   T  R  +  L F  + 
Sbjct: 67  VSKEIAKRLGVD---VQFVTPGWEVMTAGRWHGRWHMVVGSMTPTKAR--AQVLDFPAVY 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---------AHNMKYHP 173
           Y+    F +HK    +S++ L+G  I V   +T    L    +          + +    
Sbjct: 122 YYTPAAFAVHKNSKATSLADLNGKVIGVVGSSTYHKYLEHRLEIDAVGAPSFEYAVTPGE 181

Query: 174 IVFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
           I                  R DA    +  +   +    +      L D I   PLA AI
Sbjct: 182 IKLYSDINEFDELSLGDGVRLDALAQSVPVI---QQAMKKGLPIKQLGDPIFYEPLAIAI 238

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            +GD E  + ++     M  
Sbjct: 239 DKGDKELNDKLAAIVDEMKN 258


>gi|194428243|ref|ZP_03060786.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli B171]
 gi|194413803|gb|EDX30082.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli B171]
          Length = 243

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 31/250 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 +  R D   GD + +           +   + D ++           A+ QG+T
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEW---LKDSPKLAAVGDKVTDKDYFGTGLGIAVRQGNT 214

Query: 236 EWYNIVSWTH 245
           E    ++   
Sbjct: 215 ELQQKLNTAL 224


>gi|269124459|ref|YP_003297829.1| extracellular solute-binding protein family 3 protein
           [Thermomonospora curvata DSM 43183]
 gi|268309417|gb|ACY95791.1| extracellular solute-binding protein family 3 [Thermomonospora
           curvata DSM 43183]
          Length = 279

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 8/218 (3%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I  +  L+ G+     G    + +G ++GFDVD  R ++  +      I ++   +  R 
Sbjct: 35  ILDKSTLRIGVKADQPGLGLKRPDGTFEGFDVDVARYVAGRLGFAEEDITFVETPSSVRE 94

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASI 148
            ALQ +++D++      T  R+    + F  P         +      + +V  LSG  +
Sbjct: 95  QALQERRVDMIVATYSITAGRKT--KVTFAGPYYVAHQDTLVRAGDGAVRNVRDLSGRRL 152

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           C   G+ +   + +      +    +      +      +   DA + D   L       
Sbjct: 153 CKVTGSNSWRRVTE---ERKVPARLVETSSYSDCVNRLLSGELDAVSTDDLILAGFAARY 209

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                  I+   IS       + + D +    ++    
Sbjct: 210 GD--RVKIINAPISDEKYGIGLHKSDIDGCEAINTALT 245


>gi|150396797|ref|YP_001327264.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150028312|gb|ABR60429.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 260

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 82/252 (32%), Gaps = 23/252 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    +    + +  T  +              +  G       F  ++++G   GFD+D
Sbjct: 5   KRLAATASAAVFVLMTGIAMADGE--------KVVIGSEGAYPPFNNLESDGTLTGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL   +  D     ++         AL +K+ D +  +   T  R+    + F    
Sbjct: 57  IAKALCEEMKAD---CTFVTQEWDGMIPALIAKKFDAIVASMSITEERK--QQVDFTNKY 111

Query: 123 YFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y      ++ K   I+  +   LSG  +  Q+ TT       + K         ++   +
Sbjct: 112 YNTPPAIVVPKDSPITEATAAGLSGKVLGAQSSTTHSNYAEAHMKE----SELKLYPTAD 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDTE 236
           E        R DA   D+  L     T D         + +  +I+      A+ +GD  
Sbjct: 168 EYKLDLANGRIDAAIDDVVVLSEWLKTEDGACCKLLGTLPIDPVINGEGAGIAVRKGDDA 227

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 228 LREKLNKAIEAI 239


>gi|293380805|ref|ZP_06626846.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
 gi|290922629|gb|EFD99590.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus crispatus 214-1]
          Length = 283

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 108/299 (36%), Gaps = 42/299 (14%)

Query: 1   MYKDFF---VSILCLIILFFTS----------FSTNASIL------GDIKKRGFLKCGIN 41
           M K  F   ++IL ++++               + +            IK+RG+L+  + 
Sbjct: 1   MAKKIFNWIMAILFVVVVLVAGYIGISRPGINGTASEDRWNSENNVSSIKRRGYLRIAVF 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
             L  +  V + G   G+DV   R ++  +   P   +++ +NA  R   L S + DI+ 
Sbjct: 61  GDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVL 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            N   T  R+     ++         G I  K   +++  QL G S+ V  GTT E    
Sbjct: 118 ANFTLTPERKSV--ASWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAENYFT 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                     + + F+   +   A +  R  A   D S LYA       P   V +  I 
Sbjct: 176 -----KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIG 228

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
               ++ A+ +G+      +              IT+ N         N +++ + G +
Sbjct: 229 PNQYISGAVKKGNKSLQKWMDR-----------EITKLNRESFFTYDYNKELKPYFGKE 276


>gi|224367658|ref|YP_002601821.1| AapJ1 [Desulfobacterium autotrophicum HRM2]
 gi|223690374|gb|ACN13657.1| AapJ1 [Desulfobacterium autotrophicum HRM2]
          Length = 119

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/119 (43%), Positives = 74/119 (62%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    FV +L +  LF T+    A  L D+K +GF++ G+N  L GF +    G W+G D
Sbjct: 1   MKSVKFVGVLLMAALFLTAGMATADTLEDVKAKGFIQAGVNGDLFGFGKPDEKGVWRGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           VD  RA+++A+F D +K+++ PL AK RF ALQS +ID+L+RN   TL R+  LGL F 
Sbjct: 61  VDTARAVAAAVFGDANKVKFTPLTAKTRFTALQSGEIDVLTRNCTQTLTRDTDLGLDFA 119


>gi|330970137|gb|EGH70203.1| glutamine ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 277

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 88/235 (37%), Gaps = 13/235 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +A  L D+  +  L CG+   +  F+       +  G DVD C+AL+  +  +   ++  
Sbjct: 21  HADQLSDVMSKKSLSCGVYADVPPFSAPDPETRELVGMDVDLCKALAKHMGVE---LELK 77

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL+ + R   ++  ++D++  N  +T  R   +   F    Y   +  ++         S
Sbjct: 78  PLSVEARIPEVKMGRVDVIFANLAYTKSRAEQIQ--FSDPYYIAKETLVVRAANADQPKS 135

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
              G  I    G+T+E ++            P+ F+       A + ++      +    
Sbjct: 136 FFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMTA 189

Query: 202 YALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             L         E  I  + ++  P+   + QG+  +   V+ +   M  A E+ 
Sbjct: 190 IKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGEID 244


>gi|260566580|ref|ZP_05837050.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           suis bv. 4 str. 40]
 gi|261754839|ref|ZP_05998548.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|260156098|gb|EEW91178.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           suis bv. 4 str. 40]
 gi|261744592|gb|EEY32518.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
          Length = 268

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 52/162 (32%), Gaps = 11/162 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G   GFDVD  RAL   +    ++  ++         ALQ+
Sbjct: 52  KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 108

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I VQ 
Sbjct: 109 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 166

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            TT        F           +   EE        R DA 
Sbjct: 167 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAV 204


>gi|241895477|ref|ZP_04782773.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Weissella paramesenteroides ATCC 33313]
 gi|241871451|gb|EER75202.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Weissella paramesenteroides ATCC 33313]
          Length = 270

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 83/259 (32%), Gaps = 23/259 (8%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGD------IKKRGFLKCGINTGLVGFAEV 50
           M +     + ++I+ L+IL    F    +          +K +G L  G+      ++  
Sbjct: 1   MKRTRVISYSIAIVILLILAVVYFGNRKNTTQKDAFQSELKTKGKLTIGLEGTYAPYSYR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             NG   GF+V+  RA++  +        ++P         L S++ D++  N   T  R
Sbjct: 61  -KNGKLTGFEVEMGRAVAKKMGVKAD---FVPTKWDSLVAGLGSQKYDVVINNISETPAR 116

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F     +     I  K   IS +  +SG       GT  E        A    
Sbjct: 117 KKVYK--FSNPYIYSRYALITPKNSQISHLKDISGKKFAEGTGTNNEQV------AKKYH 168

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPA 229
              +         +  R  R D       A YA K        E+  L   I    ++  
Sbjct: 169 AKLVSSGDFSTTLSLLRTGRADGTINAAEAWYAYKKDNATDGLEYKDLSSEIDPVKVSAM 228

Query: 230 IIQGDTEWYNIVSWTHYAM 248
             + D +     +    A+
Sbjct: 229 FNKKDPKTRAKFNKALAAI 247


>gi|260776172|ref|ZP_05885067.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607395|gb|EEX33660.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 256

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 75/220 (34%), Gaps = 14/220 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ GI      F+  +A+G  KGFDVD   AL   +     K + +  +      
Sbjct: 22  KDWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCKEM---QVKCKIVAQDWDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           +L +++ D +      T  R+    + F          FI  K  G+     L G  I V
Sbjct: 79  SLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFDNLDGQKIAV 135

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  TT +  L D +     K   + +   +E        R  A  GD SAL    L    
Sbjct: 136 QRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVLNKAG 192

Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
              +  +   ++           A+ + D +    +    
Sbjct: 193 GEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232


>gi|58336906|ref|YP_193491.1| glutamine-binding protein precursor [Lactobacillus acidophilus
           NCFM]
 gi|227903464|ref|ZP_04021269.1| ABC superfamily ATP binding cassette transporter, glutamine-binding
           protein [Lactobacillus acidophilus ATCC 4796]
 gi|58254223|gb|AAV42460.1| glutamine-binding protein precursor [Lactobacillus acidophilus
           NCFM]
 gi|227868784|gb|EEJ76205.1| ABC superfamily ATP binding cassette transporter, glutamine-binding
           protein [Lactobacillus acidophilus ATCC 4796]
          Length = 272

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
                 ++ ++   +K    +  G+      F       G  +GF++D  RAL+  +   
Sbjct: 21  SACGNKSSQNVYRKVKADKQIVWGVRADTRLFGLTNVKTGKIEGFEIDLARALTKQMLGK 80

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +K  ++   A  R   L++  ID +      T  R     + F    +  G   ++   
Sbjct: 81  NAKADFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVPND 138

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I SV  L+  ++    GTT    +             + F+   +  +A +A++  A 
Sbjct: 139 SKIKSVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQFDDYGQAMSALKANQGVAL 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           T D   L  +    + P  + ++  + S +P   A+ +G  +  + +    
Sbjct: 195 TTDNGLLAGIAQ--ENPG-YKLVGGVYSDAPYGIAVNKGQKDMADHIDKAL 242


>gi|148977577|ref|ZP_01814156.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
 gi|145963228|gb|EDK28495.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
          Length = 256

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 78/220 (35%), Gaps = 14/220 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ GI      F+  +A+G  KGFDVD   AL + +     + + +  +      
Sbjct: 22  KEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVQCKIVAQDWDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           +L +++ D +      T  R+    + F          FI  K  G+ +   LSG  I V
Sbjct: 79  SLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-NFDDLSGQKIAV 135

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  TT +  L D +         + +   +E        R  A  GD SAL    L    
Sbjct: 136 QRATTHDKYLTDNY---GDTVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVLNKAG 192

Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
              +  +   ++           A+ + D +    +    
Sbjct: 193 GEAYEFVGPSLTDPKWFGEGFGIALRKQDKDLTKKLDAAI 232


>gi|154245544|ref|YP_001416502.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154159629|gb|ABS66845.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 266

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 86/226 (38%), Gaps = 7/226 (3%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IK+RG L   I+     +  +       G DV+  + L+  +      ++ +P++   R 
Sbjct: 30  IKQRGKLIVAIDVSHPPYGMLDDKAKETGSDVETAQLLAKDLG---VALEVVPVSGANRV 86

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
            +L + ++D++  +   T  R+    + +              K   I S + L+G SI 
Sbjct: 87  PSLLANKVDVVIASFSITPERKKV--VDYSLPYGVIPVVVSAPKAMAIKSPADLAGKSIA 144

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  GTT ++ L+   K   +  + + +E       A    + D     +S    +     
Sbjct: 145 VARGTTADIELSRTIKDAKVAANIVRYEDEATAVTALATGQQDLLAAALSTANTVAEQ-- 202

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            P + + +   ++  P+A  + + D E    V     A +   +L 
Sbjct: 203 NPGKTLEVKLEMAAYPMAVGLRKTDPELKAYVDEWVKANLANGKLN 248


>gi|242239814|ref|YP_002987995.1| glutamine ABC transporter periplasmic protein [Dickeya dadantii
           Ech703]
 gi|242131871|gb|ACS86173.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech703]
          Length = 248

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 85/245 (34%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F + +  + L F+  S  A           L    +T  V F   + +  + GFD+D
Sbjct: 2   KSLFKASVAALALAFSISSHAAE--------KPLLVATDTAFVPFEFKQGD-KYVGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +          P++      ALQ++ +D+       T  R+    + F    
Sbjct: 53  LWDAIAKQL---NLTYTLKPMDFSGIIPALQTRNVDLALAGITITEERKR--AIDFSEGY 107

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++    + I S + L+G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YNSGLLVMVRSENQEIKSEADLAGKVVAVKSGTGSV----DYAKANIKTKELRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                  HR DA   D   +     T         + D I       A  +G  +    V
Sbjct: 164 AYLELGTHRADAVLHDTPNILYFIKTAGNGK-FKAVGDSIKAQQYGIAFPKGSDDLREKV 222

Query: 242 SWTHY 246
           +    
Sbjct: 223 NGALK 227


>gi|119387586|ref|YP_918620.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119378161|gb|ABL72924.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 268

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 80/222 (36%), Gaps = 6/222 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L DI   G L+C +            +    GFDVD+C  L++A+      ++     
Sbjct: 23  DKLDDIIASGTLRCAVVLDFPPMGMRDESNTPVGFDVDYCNDLAAALGVKAEIVE---TP 79

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
             ER  AL S ++D+   +T  TL R  ++G+      +        + K GI+S   + 
Sbjct: 80  FPERIPALMSGRVDVGVASTSDTLERAKTVGM--SIPYFAFEMAVTANDKSGIASFEDMK 137

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++   AGT   + L    K          ++   ++  A    + DA     +   + 
Sbjct: 138 GKTVGATAGTFEAIALEKQVKEWGEG-TFRPYQTQADVFLALSQGQLDATVSTSTVAQSN 196

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             T + P   V+         +A    + +    N ++    
Sbjct: 197 VKTGNFPGISVVGKAPFDIDYVALFTNREEYGLINYLNLFVN 238


>gi|300718196|ref|YP_003742999.1| polar amino acid ABC transporter, periplasmic ligand binding
           protein [Erwinia billingiae Eb661]
 gi|299064032|emb|CAX61152.1| polar amino acid ABC transporter, periplasmic ligand binding
           protein [Erwinia billingiae Eb661]
          Length = 278

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 19/265 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L  ++    S    A  L DIK  G +  GI+     +      G+  G+ 
Sbjct: 1   MKK--ITLLLAAMLTLGASGLAQADTLADIKASGKMTVGIDPTFPPYEYTNDKGEIIGYS 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V   ++++  +      + +           L S   +    + +    R     + F  
Sbjct: 59  VSIMQSVAKDLGVK---LDFQKTAFNGIIPGLISGSFNAEGSSLNVNAERAK--KVLFTV 113

Query: 121 ITYFDGQGFIMHKKK------GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK---- 170
                  G ++ K +         S+  L+G     ++ +  E  L  + +    K    
Sbjct: 114 PYSKTVNGILIRKDEAGKFSAKPLSIESLAGLRGAAKSTSVPEQLLKTFNETLKSKGLKP 173

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  + +++  +A    R D    DI+ L  +      P++   + ++     +A A 
Sbjct: 174 IEIISVDTLDQTVSALMTKRADFVIDDIAVLAPVAKKY--PAKLSQVGEVGPSQWMAWAT 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255
            + D      +S    AM  + EL 
Sbjct: 232 RKDDVALNKAISDHILAMQKSGELA 256


>gi|290508436|ref|ZP_06547807.1| lysine/arginine/ornithine transport system substrate-binding
           protein [Klebsiella sp. 1_1_55]
 gi|289777830|gb|EFD85827.1| lysine/arginine/ornithine transport system substrate-binding
           protein [Klebsiella sp. 1_1_55]
          Length = 260

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   ++ S  A++   I      + G +     F+   A GD+ GFD
Sbjct: 1   MKKTIL--ALSLLVGMSSTASVFAALPQSI------RIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L S I     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D +++  +    + ++  
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E                E+       ++++K   + +V
Sbjct: 226 VELKAAFDKAL------GEIRKDGT-YDKMAKKYFDFNV 257


>gi|269960969|ref|ZP_06175338.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
 gi|269834188|gb|EEZ88278.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
          Length = 258

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 14/229 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K Q +  +
Sbjct: 18  SGMAQAKEWKTVRFGIEGAYPPFSWTETDGSIKGFDVDMANALCEEM---QVKCQIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K  G+     L 
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLK 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              + VQ  TT +  L D +         + +   +E        R  A  GD SAL   
Sbjct: 132 DVKVGVQRATTHDKYLTDNY---GDDVEIVRYGSFDEAYLDLANGRIAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
            L       +  +   ++        +  A+ + D +    +     A+
Sbjct: 189 VLNKAGGEAYEFVGPSLTDPKWFGEGMGIAVRKQDKDLTKKLDAAIKAL 237


>gi|325661857|ref|ZP_08150478.1| hypothetical protein HMPREF0490_01216 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471835|gb|EGC75052.1| hypothetical protein HMPREF0490_01216 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 276

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 88/262 (33%), Gaps = 34/262 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M ++  +  + + I                 +      ++ +     G +     +  + 
Sbjct: 1   MKRNLAIFFMGMTIATMVLGGCGDKENISKKDGKQSESVEDKKTFTVGFDAEYPPYGYMD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG++ GFD++   A+      +  K    P+N   + + L S  ID +          E
Sbjct: 61  ENGEYTGFDLELAEAVCELEGWELVK---KPINWDSKDMELNSGAIDCIWNGFTMNGREE 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-----------ELTL 160
                 F      + Q  ++ +K G+ ++  L G S+ VQA +             +  L
Sbjct: 118 E---YTFSTPYVDNSQVIVVAEKSGMKTLEDLQGKSVGVQAASAALDLLQSEEEGGQKAL 174

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
           AD F A N       F          +A   DA   D     A      R   + IL + 
Sbjct: 175 ADTFSALN------EFADYNTAFTELQAGALDALAID--VGVANYQIKSRGEGYQILEET 226

Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242
           ++    A    +G+ E  ++V+
Sbjct: 227 LNTEQYAIGFKKGNQELCDVVN 248


>gi|291454092|ref|ZP_06593482.1| secreted protein [Streptomyces albus J1074]
 gi|291357041|gb|EFE83943.1| secreted protein [Streptomyces albus J1074]
          Length = 348

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 15/250 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+      +    +  G +K G +           +G   G DVD   AL   +  +   
Sbjct: 80  TAAPLADKLPKKYQDSGVVKVGSDIAYPPVEFKDKDGKTVGLDVDLAAALGEQLGVE--- 136

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFDGQ 127
           +++           L+SK+ D+       T  R+             G+ F         
Sbjct: 137 LKFENGTFDTLLGGLRSKRYDVAMSAMTDTKARQEGLDSETGKKVGEGVDFVDYFTAGVS 196

Query: 128 GFIMH-KKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAA 185
            +    K +GI +   L G  I VQ GT +     A+  K    +     F+  ++    
Sbjct: 197 IYTNKGKDQGIKTWQDLCGKKIVVQRGTVSHDLAKAESKKCEKGEIKMETFDNDQQAQTR 256

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R+   DA + D         T+       ++ + +  +P   AI + + E  + +    
Sbjct: 257 LRSGGADAGSSDFPVAAYAVKTSGGGDHFELVGEQVEAAPYGIAISKSNPELRDAIKAAL 316

Query: 246 YAMVTAEELG 255
            A++ + E  
Sbjct: 317 DAIIESGEYD 326


>gi|253751388|ref|YP_003024529.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus suis SC84]
 gi|253753289|ref|YP_003026429.1| amino acid ABC transporter, extracellular amino acid-binding
           protein [Streptococcus suis P1/7]
 gi|253755880|ref|YP_003029020.1| amino acid ABC transporter, extracellular amino acid-binding
           protein [Streptococcus suis BM407]
 gi|251815677|emb|CAZ51265.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus suis SC84]
 gi|251818344|emb|CAZ56168.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus suis BM407]
 gi|251819534|emb|CAR45122.1| putative amino acid ABC transporter, extracellular amino
           acid-binding protein [Streptococcus suis P1/7]
          Length = 278

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K    ++  +  L   +      +T +      +    +  G +   V     + +G +
Sbjct: 4   KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D   A+          +++ P++   +   L +  ID++      T  R+    +
Sbjct: 64  TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173
            F      + Q  +  K   IS VS +    +  QAG++            K        
Sbjct: 119 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +    E     +  R D    D              +++ I+         A    + 
Sbjct: 179 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 238

Query: 234 DTEWYNIVSWT 244
           DT     ++  
Sbjct: 239 DTTLVENINKA 249


>gi|172063791|ref|YP_001811442.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171996308|gb|ACB67226.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 266

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 74/227 (32%), Gaps = 13/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S  A +L  +K+ G LK  +      F    A G  +GFDVD  +A+++ +   P   Q+
Sbjct: 24  SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138
           +          LQ+ + D++      T  R     L F     F     +  +       
Sbjct: 81  VTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVFSSAQLLQRRNDTRAFK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+ +L G  + V  G+     +              V+    E      A R DA   D 
Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + +  + N              +  +     +G+ ++   +    
Sbjct: 194 -LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239


>gi|254229002|ref|ZP_04922423.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Vibrio sp. Ex25]
 gi|151938470|gb|EDN57307.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Vibrio sp. Ex25]
          Length = 258

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K + +  +
Sbjct: 18  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCKIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +     L 
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 132 GKKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 189 VLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 234


>gi|329120282|ref|ZP_08248950.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327462623|gb|EGF08946.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 268

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 83/239 (34%), Gaps = 8/239 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + +  +S     ++    +   N     F  +  N + +GFDVD   A++ A      +
Sbjct: 26  AANTPASSAPAAPQEGKVYRVAANAEFAPFEFMDTNNNVQGFDVDLINAMAKAGG---FR 82

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++        F AL +  +DIL+     T  R+    + F    Y   Q  ++ + K I
Sbjct: 83  VEFKHQPWDSLFAALGNGDVDILASAVTITDERK--QSMDFSDPYYKITQVILVPQGKDI 140

Query: 138 SSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
            S   L     + V  GTT +L +     A N       FE +  +         DA   
Sbjct: 141 KSAEDLKKANKVGVVTGTTGDLAVGKLLGADN--GKIARFENITLVTKELENGGLDAVVS 198

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D + +      N      ++      +      + +GDTE    ++     +  + E  
Sbjct: 199 DSAVVANYVKNNGNKGFTMVTVPDFPEENYGFVVRKGDTETQAALNAALKKVRESGEYD 257


>gi|49475425|ref|YP_033466.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           henselae str. Houston-1]
 gi|49238231|emb|CAF27441.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           henselae str. Houston-1]
          Length = 250

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 89/248 (35%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++  +  L   +   NA           LK   +     F+ V +N + +GFD
Sbjct: 1   MK---LLAVALITNLVLFTQLANAKT---------LKIASDASYPPFSYVNSNNELQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  + +     L +K+ D +  +   T  R     + F  
Sbjct: 49  IDISYALCKKMNVE---CTIVTQDFEGMIPGLLAKKYDAIISSLAPTEER--LQKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+HK  GI   S       ++ VQ+ TT  +   D++ A     +  ++  
Sbjct: 104 AYYSTELVVIVHKDSGIKEISAEAFKDKNLGVQSNTTQAVYAEDHYAAEG--VNIKLYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E+     +HR D    D  A        ++    ++     +K P+A AI + + +  
Sbjct: 162 AIEVKRDLLSHRLDIVISDKLAAVNWLENEEKDCCQLLGSLKKTKLPIAIAIRKNNNDLK 221

Query: 239 NIVSWTHY 246
           N  +    
Sbjct: 222 NKFNEAIK 229


>gi|299783459|gb|ADJ41457.1| Glutamate ABC transporter substrate-binding component
           [Lactobacillus fermentum CECT 5716]
          Length = 273

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 22/283 (7%)

Query: 1   MY--KDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52
           M   K +   +    ++          +   L  IK +  L  G +     F        
Sbjct: 1   MKVNKKWLALLSLAFLVVIGLAGCGKKSDDSLQQIKDKKVLTMGTSADYAPFEFTIMKNG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
             ++ G+D+   + ++ ++      ++   +        LQ  ++DI     + T  R+ 
Sbjct: 61  KKEYVGYDIMVAQKIADSLGVK---LKVQNMEFSSIISELQDHKVDIALAGMNVTPQRKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              + F    Y + +  ++ K      ++++   GAS  VQ  +T E       KA  + 
Sbjct: 118 --AVDFSKPYYTEQESLLVKKADADKYNTIADTKGASFGVQQSSTQETIAKTQTKAKLVS 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAP 228
              +            ++ + D                        V +    S   ++ 
Sbjct: 176 ESLVTGL-----ATDLKSGKLDGVVLAKKVAEQYVAQYPDTYAIAKVKITAPASMKEISI 230

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
           AI + + +    V+     +  + EL    K   ++ +  TN 
Sbjct: 231 AIPKNEPKLKAAVNKEITKLQKSGELDKLFKKAQEIQEQNTNK 273


>gi|260663430|ref|ZP_05864320.1| glutamate ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
 gi|260551971|gb|EEX25024.1| glutamate ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
          Length = 273

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 22/283 (7%)

Query: 1   MY--KDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52
           M   K +   +    ++          +   L  IK +  L  G +     F        
Sbjct: 1   MKVNKKWLALLSLAFLVVIGLAGCGKKSDDSLQQIKDKKVLTMGTSADYAPFEFTIMKNG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
             ++ G+D+   + ++ ++      ++   +        LQ  ++DI     + T  R+ 
Sbjct: 61  KKEYVGYDIMVAQKIADSLGVK---LKVQNMEFSSIISELQDHKVDIALAGMNVTPQRKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              + F    Y + +  ++ K      ++++   GAS  VQ  +T E       KA  + 
Sbjct: 118 --AVDFSKPYYTEQESLLVKKVDADKYNTIADTKGASFGVQQSSTQETIAKTQTKAKLVS 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAP 228
              +            ++ + D                        V +    S   ++ 
Sbjct: 176 ESLVTGL-----ATDLKSGKLDGVVLAKKVAEQYVAQYPDTYAIAKVKITAPASMKEISI 230

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
           AI + + +    V+     +  + EL    K   ++ +  TN 
Sbjct: 231 AIPKNEPKLKAAVNKEITKLQKSGELDKLFKKAQEIQEQNTNK 273


>gi|56750285|ref|YP_170986.1| polar amino acid transport system substrate-binding protein
           [Synechococcus elongatus PCC 6301]
 gi|81300085|ref|YP_400293.1| extracellular solute-binding protein [Synechococcus elongatus PCC
           7942]
 gi|56685244|dbj|BAD78466.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus elongatus PCC 6301]
 gi|81168966|gb|ABB57306.1| extracellular solute-binding protein, family 3 [Synechococcus
           elongatus PCC 7942]
          Length = 260

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 92/234 (39%), Gaps = 18/234 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   +    L   F+ + ++   A+ L  IK+RG+L  G+   +   +   A G W+GF
Sbjct: 11  RRWLLLGTSVLASFFYGANTSGTIAADLETIKRRGYLIVGVQANVAPLSWQDAQGQWQGF 70

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  R+L++ +  + + +++  L +++R  AL + ++D+L      T  R+      F 
Sbjct: 71  EVDLARSLAAELLGNSAAVRFEGLQSRDRLPALLADRVDLLIAQMTVTDARQRVAQ--FS 128

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y D  G +  +              + V  G++    L             +  +  
Sbjct: 129 RPYYRDRIGLLTRRGIT-------QPQRVAVLQGSSAIPLLRWQAPE----LALVGVKSY 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                A    + D    D   L   +  +DR   + +LP      PLA A+ QG
Sbjct: 178 AAAQTALDRGQVDGIAADRLVLQQWQRQSDR---YQLLPQQWGDFPLAIALPQG 228


>gi|297192144|ref|ZP_06909542.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720210|gb|EDY64118.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 357

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 84/244 (34%), Gaps = 14/244 (5%)

Query: 16  FFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
              S +  A  L  +I+ +G +K G +        +       G D+D  +AL   +  +
Sbjct: 90  GTASAAPLADKLPKEIRDKGVIKVGSDIAYAPMEFMDEGNKPAGVDIDIAKALGKVLGVE 149

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR------EISLGLAFRPITYFDGQG 128
               Q+      +  L + + + DI+  +   T  R      +   G  F    +  G  
Sbjct: 150 ---FQFENSTFDQLVLGMNNGRTDIVMSSMTDTKERQQGATEDAKGGADFVN-YFKAGSA 205

Query: 129 FIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE-EIDAA 185
            ++ K     ++++  L G ++  Q GT  E  L +  K              + +    
Sbjct: 206 ILVQKGNPKQVTTLDDLCGLTVAAQRGTANEALLKETQKKCGSDKIKEFISDQDTDSITQ 265

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  R DA   D       +L         ++ + I  +P   A+ + +T+  + +    
Sbjct: 266 LQTKRADAVITDFPVALYNELNAGGGKLFEVVGEQIDAAPYGIAVSKKNTQLRDALQAAV 325

Query: 246 YAMV 249
             ++
Sbjct: 326 QKII 329


>gi|300310886|ref|YP_003774978.1| amino acid ABC transporter periplasmic protein [Herbaspirillum
           seropedicae SmR1]
 gi|300073671|gb|ADJ63070.1| ABC-type amino acid transport system, periplasmic component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 265

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 83/249 (33%), Gaps = 10/249 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
                L ++        A  L DI+K G +K G+      +  V ++   +G D+D  R 
Sbjct: 7   AIAASLGLMAVAVHPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVARL 66

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +      +    +    R   LQ+ +ID++         RE    + F        
Sbjct: 67  VAKGMGVKAELVP---VPISSRMAFLQTHKIDLIISTLGKNAEREKV--IDFSQGYAPYN 121

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                     ++  + L+  ++ V   T  +L L D             +E    + AAY
Sbjct: 122 NSVFGVAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPK---STVIKRYEDNNGLIAAY 178

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + +            A  L    P+   +L  II+ S     + +G+      V+    
Sbjct: 179 VSGQVQLVGTGD--FVAYALAEKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALT 236

Query: 247 AMVTAEELG 255
           A   + EL 
Sbjct: 237 ASKKSGELN 245


>gi|289642305|ref|ZP_06474453.1| extracellular solute-binding protein family 3 [Frankia symbiont of
           Datisca glomerata]
 gi|289507837|gb|EFD28788.1| extracellular solute-binding protein family 3 [Frankia symbiont of
           Datisca glomerata]
          Length = 286

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 90/260 (34%), Gaps = 24/260 (9%)

Query: 5   FFVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
                + L      S                  +    + + G +  G       F    
Sbjct: 4   VLAGTVALAAAGCGSDTTGTEAETPAKPTFAAGTTAARLAEAGKVTVGTKFDQPLFGLKG 63

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             GD +GFDV+  + ++  +  DP  I ++   + +R  A+Q  ++D +         R+
Sbjct: 64  LGGDVEGFDVEIAKIIADGLGIDPDDITFVETPSAQREGAIQQSRVDFIVATYTINDKRK 123

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVS---QLSGASICVQAGTTTELTLADYFKAHN 168
               ++F    Y  GQ  ++ K     +     + + A +C  +G+T    + +Y  A N
Sbjct: 124 --QLISFAGPYYQAGQDIMVKKDNTTITGPESLRATNAKVCSVSGSTPAEKIKEYADASN 181

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                ++F+   +   A R  + DA T D   L  L   +       I+    +  P   
Sbjct: 182 ----IVLFDVYSKCADALRTGQVDAVTTDNVVLLGL--VDASGGAFKIVGKPFTTEPYGI 235

Query: 229 AIIQGDTEWYNIVSWTHYAM 248
            I +GDT +   +     A 
Sbjct: 236 GIKKGDTAFCQFIDEQLTAA 255


>gi|170741318|ref|YP_001769973.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168195592|gb|ACA17539.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 263

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    ++L         F+ +A +L D+     ++   +  +     + AN    G D
Sbjct: 1   MRRPILAALLAATAFVAMPFAAHADLLDDVLSAKKIRVATDLAIPPSGMIDANLKPTGSD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + L+  +     +++++      R   +Q+ + D++      T  R     + F  
Sbjct: 61  VETAQLLAKDLG---LELEFVQTTGATRIPNVQTNKADLIISTLSVTPERAKV--IDFTK 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                       K     S   L G +I V  GTT + TL +     +       ++   
Sbjct: 116 PYAALQSVVGCLKSVEAKSWPDLKGKTIAVSRGTTQDTTLTNM---KDRDLRLARYDDDA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  A  + + D      +     ++    PS        I+   LA  + +G+  +   
Sbjct: 173 TMVTAAVSGQADCIATSATI--VNQIGVKNPSRVYEPKVPITTFDLAMGVRKGEPRFVE- 229

Query: 241 VSWTHYAMVTA 251
                 A +  
Sbjct: 230 ---KLNAWIET 237


>gi|220929988|ref|YP_002506897.1| extracellular solute-binding protein family 3 [Clostridium
           cellulolyticum H10]
 gi|220000316|gb|ACL76917.1| extracellular solute-binding protein family 3 [Clostridium
           cellulolyticum H10]
          Length = 268

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 85/250 (34%), Gaps = 15/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K  F   +   I    +       +  I+K G L  G +     +     V       
Sbjct: 5   MLKKLFCLFIVAAIGISIAGCGGGETMKRIEKTGKLVVGTSADYAPYEYHMLVDGKDTIV 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+     ++  +     ++Q +  +      +L + ++DI+          E    + 
Sbjct: 65  GIDISIVEEIAKDMG---VQLQIVDTDFNGLLSSLNTNKVDIVIAGM--NPDEERKKSVD 119

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F  I Y   QG ++  +      +V+ L    +  Q GTT E  + +  +      + + 
Sbjct: 120 FSKIYYEAKQGVMVRAEDKDKYKTVADLKDKKVGAQLGTTQEKIVKEQIE----GVNLVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             ++ ++    +  + DA   +     +  + N+       +P        A A+ +G++
Sbjct: 176 LGKIPDLVMELKNKKIDALVVEFPV-ASGYVKNNDDLALTDIPVKDDTGGSAIAVKKGNS 234

Query: 236 EWYNIVSWTH 245
                ++ + 
Sbjct: 235 NLVEQINKSL 244


>gi|313892375|ref|ZP_07825967.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Dialister microaerophilus UPII 345-E]
 gi|313119234|gb|EFR42434.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Dialister microaerophilus UPII 345-E]
          Length = 260

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 12/249 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K           L      ++++    I     ++ G  T    F  V  +  + GFD+
Sbjct: 6   FKTILAIGAMAAALISAGCGSDSTTKNGIPP--VIRVGSETTFPPFEFVDGD-KYVGFDL 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+   +    SK+++  +       A+QS QID+++   D T  R   +  +    
Sbjct: 63  DLAEAVIKQMG---SKMEFKSMGFDALIPAVQSGQIDMIAAGMDATPERAKQVAFSDPYF 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +              I     L G ++  Q GT +     +   A+         +   +
Sbjct: 120 SENGYVIVTRKDNDTIHDWKDLEGKNVGAQVGTQSVELAQEAKAAN-----VKQLDSNSQ 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                +A   DA   D               +  I+        ++ A+ + + E  + V
Sbjct: 175 AFMELQASTLDAVVLDRPVTMYYLNQGAD-KDLQIVGTPKPGPAMSLAVNKDNKELQDAV 233

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 234 NKALKEIKE 242


>gi|300313610|ref|YP_003777702.1| amino acid ABC transporter/signal transduction system periplasmic
           protein/domain-containing protein [Herbaspirillum
           seropedicae SmR1]
 gi|300076395|gb|ADJ65794.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 271

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 73/259 (28%), Gaps = 21/259 (8%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGF 47
           M K F        L    +     +                          G+ +    F
Sbjct: 1   MIKMFTRHARALALTAGFVGMLGLAACGKQEDKSATAAAPQAAAPARVYVVGVESAYAPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           +      D  GFD+D  +AL+  I  +   ++++P   +  F  L     D+L      T
Sbjct: 61  SSENEQKDVVGFDIDIMKALAKKIGIE---VKFVPTPFEGFFNFLAQGDRDLLISAITIT 117

Query: 108 LLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
             R+    +AF    +   Q   +      +S +  L   ++  Q+ T+ +  +      
Sbjct: 118 DERKK--SVAFSEPYFVATQTIALPAADTKVSKMEDLKPLTVGTQSATSGDELVQQVLGK 175

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +        F+          +   DA   D   +      N       +      K   
Sbjct: 176 N--SAKIKRFDSTPLALKELESGGVDAVVADEPVVKNYIANNPNSKLRTVTDPSFPKEDY 233

Query: 227 APAIIQGDTEWYNIVSWTH 245
             A+ + D E    ++   
Sbjct: 234 GIAVRKDDPELLAKINKGL 252


>gi|251788514|ref|YP_003003235.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247537135|gb|ACT05756.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 240

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 81/222 (36%), Gaps = 10/222 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A    DI+KRG L+  +      F  V  +   +G+D+D    L+  +     K+Q +P+
Sbjct: 2   ADQWQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAHYLADEM---KLKLQLVPV 58

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            +  R   LQ+ ++D++  +      RE    + F         G    K+  + +   L
Sbjct: 59  TSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSSAYAPFFLGVFGPKETDVGAPEAL 116

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V  G   ++ L +             +E      +AY + +          + A
Sbjct: 117 QGKTVGVTRGAVEDMVLTETAPK---TADIKRYEDNNTTLSAYMSGQVQYIATGNLVVAA 173

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +      P++  +   ++  SP    + + +      V+   
Sbjct: 174 IA--EKNPAKAPVAKFMLKDSPCYIGLKKDEPALKAKVNELI 213


>gi|209526069|ref|ZP_03274601.1| extracellular solute-binding protein family 3 [Arthrospira maxima
           CS-328]
 gi|209493457|gb|EDZ93780.1| extracellular solute-binding protein family 3 [Arthrospira maxima
           CS-328]
          Length = 282

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 97/268 (36%), Gaps = 23/268 (8%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   + +L LI+ + FT ++   ++L  I++ G L+ G+ T  V F+ +  NG+ +G+
Sbjct: 1   MNQKLAIPLLSLILSVGFTGYAAAETVLEQIERTGVLRAGVRTDAVPFSYLNDNGEIEGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            VD  R +   +    + P +++   +  ++RF  +Q   +D++   T  T  RE   G+
Sbjct: 61  SVDLIRLIHGRLEEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE--NGV 118

Query: 117 AFRPITYFDGQGFIMHKKKGIS-----------SVSQLSGASICVQAGTTTELTLADYFK 165
            F    +  G   ++  +               S   L   +I     TT +  L   + 
Sbjct: 119 DFSTPFFVTGIQMLVKTENRDRLDPTQLSETDISTVSLERVTIGFLESTTADSELRPVYP 178

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISK 223
               +          E     +A        D   L      +    ++  L     ++ 
Sbjct: 179 EAQWE----AVPSRAEGIRRLQAGELQGIVSDGILLLGQLWKDGSDRQNFQLVPSQPLTF 234

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                 +     EW  +V+ T  +    
Sbjct: 235 ENYGCILPMNSREWSRVVNSTIASPENT 262


>gi|124485037|ref|YP_001029653.1| hypothetical protein Mlab_0210 [Methanocorpusculum labreanum Z]
 gi|124362578|gb|ABN06386.1| extracellular solute-binding protein, family 3 [Methanocorpusculum
           labreanum Z]
          Length = 263

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 90/263 (34%), Gaps = 18/263 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F  ++  +++     +          ++     GI+     ++ V  +G++ GFD
Sbjct: 1   MDRKVFFGVIIALLVVSAVLTAGCVSNQT--EKKTYIVGIDGDYPPYSYVDESGNFVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + ++     +   ++   +       AL + +ID++      T  R     + F  
Sbjct: 59  VESIQWIAEQ---EGFNVEIKAVAWDGIIPALLANKIDMVYSGMTITPERAA--QVTFSK 113

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLA--DYFKAHNMKY-----H 172
             +   QG  +     ++    +    +I VQ   + +  +   D+F             
Sbjct: 114 PYWSVDQGVAVKNGSTVTLDQFKAGNLTIGVQRSCSADQYIQSDDFFGQAKYDQMVKDGK 173

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             +++   +   A       A   D   +             V+L  I +    A A+  
Sbjct: 174 IKLYDTFPQSMVALENGLVQAVIFDDVNIKDYI---KGKDGIVMLATIPTGEEYAVAMRN 230

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
           GDTE   +++     ++ +E+  
Sbjct: 231 GDTELQKLINDGLTKLMASEKWN 253


>gi|70726105|ref|YP_253019.1| hypothetical protein SH1104 [Staphylococcus haemolyticus JCSC1435]
 gi|68446829|dbj|BAE04413.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 484

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 81/257 (31%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           M K   V  + ++I          + +   +    IK RG L+ G++             
Sbjct: 1   MKKLTKVLAIAILISLTLIYIQPMALADEDATWNKIKDRGELRVGLSADYAPLEFEKTKN 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D++  + ++     +  K++ + +       AL++ +ID++      T  R+
Sbjct: 61  GKTEYAGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDVIISGMTTTPERK 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F       G   ++ K        +S  +   I  Q G+  E       +    
Sbjct: 118 K--EVDFSEPYMETGNVMLIRKNNNDTYHKLSDFNNKKIGAQKGSEQEKIAQQEIE---- 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                   R+ +   A ++ + D    +           ++      +     K P   A
Sbjct: 172 NAQISSLNRLPDAILALKSKKIDGLVIEKPV-ADAYAKQNKDLNIAHVSFNEEKKPTVIA 230

Query: 230 IIQGDTEWYNIVSWTHY 246
           + +        ++ +  
Sbjct: 231 LPKDSPILLEHLNHSIK 247


>gi|255655793|ref|ZP_05401202.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-23m63]
 gi|296450969|ref|ZP_06892716.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP08]
 gi|296879065|ref|ZP_06903061.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP07]
 gi|296260187|gb|EFH07035.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP08]
 gi|296429938|gb|EFH15789.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP07]
          Length = 267

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 84/258 (32%), Gaps = 16/258 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M        +  I+L         S   + K +         +  G +   V    +   
Sbjct: 1   MKNILKKVGIFTIMLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREI 112
           G+  GFDVD  +     +     ++++ P++   +   L   + +D+L      T  R+ 
Sbjct: 61  GNTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMK 170
              +++      + Q  +      I+S + L    +  Q G+T    +     F      
Sbjct: 118 I--VSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKG 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             P++++  ++        R  A  GD   +    +      ++ +L D         A 
Sbjct: 176 GAPVLYDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVAT 234

Query: 231 IQGDTEWYNIVSWTHYAM 248
            + + E    ++ T   M
Sbjct: 235 SKENPELCEKINETLKEM 252


>gi|184155854|ref|YP_001844194.1| glutamate ABC transporter substrate-binding component
           [Lactobacillus fermentum IFO 3956]
 gi|227515552|ref|ZP_03945601.1| glutamate ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Lactobacillus fermentum ATCC
           14931]
 gi|183227198|dbj|BAG27714.1| glutamate ABC transporter substrate-binding component
           [Lactobacillus fermentum IFO 3956]
 gi|227085982|gb|EEI21294.1| glutamate ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Lactobacillus fermentum ATCC
           14931]
          Length = 273

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 22/283 (7%)

Query: 1   MY--KDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52
           M   K +   +    ++          +   L  IK +  L  G +     F        
Sbjct: 1   MKVNKKWLALLSLAFLVVIGLAGCGKKSDDSLQQIKDKKVLTMGTSADYAPFEFTIMKNG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
             ++ G+D+   + ++ ++      ++   +        LQ  ++DI     + T  R+ 
Sbjct: 61  KKEYVGYDIMVAQKIADSLGVK---LKVQNMEFSSIISELQDHKVDIALAGMNVTPQRKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              + F    Y + +  ++ K      ++++   GAS  VQ  +T E       KA  + 
Sbjct: 118 --AVDFSKPYYTEQESLLVKKADADKYNTIADTKGASFGVQQSSTQETIAKTQTKAKLVS 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAP 228
              +            ++ + D                        V +    S   ++ 
Sbjct: 176 ESLVTGL-----ATDLKSGKLDGVVLAKKVAEQYVAQYPDTYAIAKVKITAPASMKEISI 230

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
           AI + + +    V+     +  + EL    K   ++ +  TN 
Sbjct: 231 AIPKDEPKLKAAVNKEITKLQKSGELDKLFKKAQEIQEQNTNK 273


>gi|51245411|ref|YP_065295.1| amino acid ABC transporter, periplasmic substrate-binding protein
           [Desulfotalea psychrophila LSv54]
 gi|50876448|emb|CAG36288.1| probable amino acid ABC transporter, periplasmic substrate-binding
           protein [Desulfotalea psychrophila LSv54]
          Length = 261

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 83/247 (33%), Gaps = 14/247 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
            + F    + L +   T  S  A S L  +   G ++ G       F  V    G+++GF
Sbjct: 6   KQKFCFGFIVLSLFLLTGISAQADSSLQQVVDSGEIRVGFCAQYPPFESVNVKTGEFEGF 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+   +A++  +      I       +     L+    D+L      +  R       F 
Sbjct: 66  DIALAKAIADEMGVAAVLID---AEWQGLLGGLKKGDYDVLITCMAKSESR--RDNTNFS 120

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            + Y      ++ +   I      LSG  I VQ G+ +E  LAD  +          +  
Sbjct: 121 DVYYTLPDVIVVRQDDTIVKDKDDLSGKVIGVQLGSGSEQ-LADSME--GRLKEIKRYNY 177

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E     +A R DA                  S + I+ + ++K+ +   + +G     
Sbjct: 178 NPEAFTDLKAKRIDAVFVG---YAYAVNHMKSDSAYKIVDEPLAKADIVAVLDKGADALT 234

Query: 239 NIVSWTH 245
             ++ + 
Sbjct: 235 QKINESL 241


>gi|120403417|ref|YP_953246.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119956235|gb|ABM13240.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 279

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 10/223 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G      G  +   +G   GFDVD    ++  +   P KI++    + +R   +Q+
Sbjct: 43  TIVIGTKFDQPGLGQKNPDGTMSGFDVDVATYVAGELGYTPDKIEWKESPSAQRENLIQN 102

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI-CVQA 152
            Q+  ++     T  R+    ++F       GQ  ++      I+  + L    I C  +
Sbjct: 103 GQVTFIAATYSITDARKE--KVSFAGPYLITGQSLLVRSDNTDITGEASLENNKILCSVS 160

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T    + D             ++       A +    DA T D   L      +  P 
Sbjct: 161 GSTPAQKIKD----KYQGVQLQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQS--PG 214

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              I+ +  S+      + + DTE    ++     M  +    
Sbjct: 215 AFKIVGEPFSEERYGIGLKKDDTELRTKINDALKKMEESGAWK 257


>gi|227114777|ref|ZP_03828433.1| histidine-binding periplasmic protein [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 259

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 97/279 (34%), Gaps = 29/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V  L LI+          S + +I K   +K G +     F    A+G+  GFD
Sbjct: 1   MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L G  + V   +T E      ++   +    + ++  
Sbjct: 107 KLYAANSRLIAKKGTSIEPTLASLGGKRVGVLQASTQEAFANANWQPKGVD--VVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R DA   D  A     L  D   ++      +             + + D
Sbjct: 165 DLIYADLAAGRIDAAFQDEVAASEGFLKLDAGKDYEFAGPAVKDDKFFGVGTGMGLRKAD 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE    +          EE+       +  +K   + DV
Sbjct: 225 TELKAALDKAF------EEMRKDGT-YDTFAKKYFDFDV 256


>gi|310644684|ref|YP_003949443.1| amino acid abc transporter, amino acid-binding protein/permease
           protein, his/glu/gln/arg/opine family [Paenibacillus
           polymyxa SC2]
 gi|309249635|gb|ADO59202.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Paenibacillus
           polymyxa SC2]
          Length = 269

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 76/239 (31%), Gaps = 10/239 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V+ + L ++  T   +  S          L  G       FA      +  G+D
Sbjct: 1   MKKSALVAAIGLSLVLLTGALSGCSSKEAASGDKVLYVGTQNDYPPFAFTNDKNELTGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + +   +  D  KI+++P      FLAL + ++ I++        RE      F  
Sbjct: 61  VEVVKEIDKKL--DGYKIEFVPSGWDAIFLALDANKVQIIADEVAKNPEREK--KYLFSD 116

Query: 121 I-TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE- 177
              +      I+ K +  I S+  L G  +    G +    L  Y   +  K      + 
Sbjct: 117 ESYFSAQSVIIVKKGRTDIHSLKDLEGKKVAASVGDSYTQLLEQYNAKNGNKIILKYNDT 176

Query: 178 -RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               +     +  R DAY  D     A         +   + + +    +     +   
Sbjct: 177 GTSSDNLQDVQNGRVDAYVNDPVMAAA--TIKKEGLQVEAVGEPVQSDNINLVFKKDKQ 233


>gi|251789979|ref|YP_003004700.1| cationic amino acid ABC transporter periplasmic binding protein
           [Dickeya zeae Ech1591]
 gi|247538600|gb|ACT07221.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya zeae Ech1591]
          Length = 249

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 24/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +F+  A+          ++   +     F  + A     GFD
Sbjct: 1   MKKLILAALLAGTAFSSMTFNAMAAE--------TIRFAASATYPPFESLDAGNQIVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +        +          AL+ ++ D +    D T  R   +   F  
Sbjct: 53  IDLANALCKQL---QVTCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     S++ L G  I ++ GTT +  L +           + ++  +
Sbjct: 108 PYYANSAIVIAQKG-KFHSLADLKGKRIGIENGTTHQKFLQEKHPE----VTTVPYDSYQ 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P    +   +   +     L  A+   +  
Sbjct: 163 NALIDLKNGRLDGVFGDTAVVNEWL--KANPDLATVGEKVTDPAYFGIGLGIAVRPDNQA 220

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 221 LLEKLNSALNAI 232


>gi|330939294|gb|EGH42689.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 254

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 27/254 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------KMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  RE    + F   
Sbjct: 52  EIGQALCAKMKVECEAVT---SDWDGIIPALMASKFDFLISSLSITEAREEV--VDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L G S+  Q  T     L D          P +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSIEKAKESLVGKSVGAQRSTLAATWLEDKLG----IMDPKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +G+T
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGNT 222

Query: 236 EWYNIVSWTHYAMV 249
           E  + ++     ++
Sbjct: 223 ELRDRLNVALKEII 236


>gi|296876760|ref|ZP_06900808.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus parasanguinis ATCC 15912]
 gi|296432262|gb|EFH18061.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus parasanguinis ATCC 15912]
          Length = 275

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +     +  L ++F T+                +K   +  G +   V     + +G 
Sbjct: 1   MKRVIPWLLGVLSLVFLTACGQTVSDPKVDNWQKYQKEQSITIGFDNTFVPMGFEQKDGT 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + GFD+D    +  +       + + P++   +   L++  ID +      T  R     
Sbjct: 61  YAGFDIDLANQVFESYG---IHVNWQPIDWDMKETELKNGTIDAIWNGYSATDER--RES 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI- 174
           +AF      + Q  +  K  GI SV  +    +  Q G++  +      K    K     
Sbjct: 116 VAFTKPYMKNEQVLVTKKASGIQSVDGMKEKRLGAQTGSSGYMDFEANPKILKNKVKNQK 175

Query: 175 --VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++   E     +  R D    D         T     ++ + P        A  + +
Sbjct: 176 ATQYQSFNEALIDLQNDRIDGLLIDRVYANYYLQTEGILKDYNVFPVGFETESFAVGVRK 235

Query: 233 GDTEWYNIVSWT 244
            D      +   
Sbjct: 236 SDKTLKKKIDEA 247


>gi|241763926|ref|ZP_04761969.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241366821|gb|EER61253.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 249

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 14/213 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G +        V  NG   GFD++   A++  +     +++++ ++ K     L S
Sbjct: 28  VLRVGTDATFPPMEFV-ENGKRTGFDIELVEAIAKTMGK---QVEWVDIDFKGLIPGLIS 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           K+ D+       T  R+    + F    Y  G   ++      I+ ++ L G  + VQ G
Sbjct: 84  KRFDMAVSAIYITDERKKV--VDFTDSYYAGGLVVMVKADNKAINKLADLDGKKVSVQVG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T +   L + F         +  E+ +E+       R DA         A +    RP  
Sbjct: 142 TKSVAYLTEKFPK----VQRVEVEKNQEMFNLVDIGRADAAVTGKP--AAFQYVRTRPG- 194

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +L + ++      A+ +   E     +    
Sbjct: 195 LRVLDEQLTTEEYGMALRKDTPELTKAFNGAIN 227


>gi|259047506|ref|ZP_05737907.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
 gi|259035697|gb|EEW36952.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
          Length = 268

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 21/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           M K   + +L + +L   +       ST +++L  I  +  +  G       F       
Sbjct: 1   MKKIIAMLMLVMGLLAACTQQPTIENSTGSAVLDRIYTKKKIVIGTTADYPPFEWHYVKD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G D+D   AL  A+  +   ++   +       A+++ ++D++      T  R 
Sbjct: 61  GKDSVVGIDIDIANALGEALGVE---VEIREMEFNFLIAAMKAGKVDLVLAGITPTEERS 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
             +   F  I Y      ++ K      +++    GA++  Q GT+ E  + D     N+
Sbjct: 118 KEVA--FSNIYYDSHMVAVVKKTDADKYTTIDAFDGANVGAQKGTSQEGIVKDTLTGANL 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
              P        +  A +  + DA   D        +  +       +      +  A  
Sbjct: 176 TSQPK----NPTLILALQQGKLDAVIMDN-IAADEFVKANSDLTVASVEIPSEDAGTAAV 230

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
             +G+  +   V     A+  + +L 
Sbjct: 231 AQKGNEVFLKKVQEVLDALEASGKLK 256


>gi|39998495|ref|NP_954446.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Geobacter sulfurreducens PCA]
 gi|39985442|gb|AAR36796.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Geobacter sulfurreducens PCA]
 gi|298507440|gb|ADI86163.1| polar amino acid/opine ABC transporter, periplasmic amino
           acid-binding protein [Geobacter sulfurreducens KN400]
          Length = 251

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 16/247 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   + +    +    +    A   G       +    +        V AN    GFD+D
Sbjct: 5   RRTLMVLTLAAVCLTAAVPRQAEAAGR-----TVTVATDATWPPMEMVDANKKIVGFDID 59

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A++         +Q+        F  L + + D +  +   T  R+      F    
Sbjct: 60  FMNAIAKEAG---FAVQFKNTAWDGIFAGLGAGRYDAIISSVTITEERKK--QYDFSDPY 114

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              GQ  ++ K +  +++S L G  +  Q GTT    +               ++ +   
Sbjct: 115 INIGQILVVPKTEKATNLSGLKGKKVGAQIGTTGAFEIKKV-----QGVELKNYDEIGLA 169

Query: 183 DAAYRAHRCDAYTGDISALY-ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                A R      D            +  ++  I+    +       + +GD E   ++
Sbjct: 170 FEDMAAGRIVGVVCDEPTAAHYALQKAEYKNKFKIVGKSFTAESYGIVVKKGDKELLALI 229

Query: 242 SWTHYAM 248
           +    A+
Sbjct: 230 NKGIKAV 236


>gi|329121306|ref|ZP_08249932.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Dialister micraerophilus DSM 19965]
 gi|327469715|gb|EGF15181.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Dialister micraerophilus DSM 19965]
          Length = 260

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 12/249 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K           L      ++++    I     ++ G  T    F  V  +  + GFD+
Sbjct: 6   FKTILAIGAMAAALISAGCGSDSTTKNGIPP--VIRVGSETTFPPFEFVDGD-KYVGFDL 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+   +    SK+++  +       A+QS QID+++   D T  R   +  +    
Sbjct: 63  DLAEAVIKQMG---SKMEFKSMGFDALIPAVQSGQIDMIAAGMDATPERAKQVAFSDPYF 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +              I     L G ++  Q GT +     +   A+         +   +
Sbjct: 120 SENGYVIVTRKDNDTIHDWKDLEGKNVGAQVGTKSVELAQEAKAAN-----VKQLDSNSQ 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                +A   DA   D               +  I+        ++ A+ + + E  + V
Sbjct: 175 AFMELQASTLDAVVLDRPVTMYYLNQGAD-KDLQIVGTPKPGPAMSLAVNKDNKELQDAV 233

Query: 242 SWTHYAMVT 250
           +     +  
Sbjct: 234 NKALKEIKE 242


>gi|270260986|ref|ZP_06189259.1| hypothetical protein SOD_a02110 [Serratia odorifera 4Rx13]
 gi|270044470|gb|EFA17561.1| hypothetical protein SOD_a02110 [Serratia odorifera 4Rx13]
          Length = 247

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 81/247 (32%), Gaps = 22/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSIFKVSLAALSLAFAVSSHAA----------DKLIVATDTAFVPFEFKQGD-KYVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +  D       P++      ALQ+K ID+       T  R+    + F  
Sbjct: 50  IDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITEERKK--AIEFSD 104

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      + SV  L G  + V++GT +     DY K +        F  +
Sbjct: 105 GYYKSGLLVMVNANDDSVKSVKDLDGKVVAVKSGTGSV----DYAKQNIKTKDLRQFPNI 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +    +      +   + + +       A  +G  E   
Sbjct: 161 DNAYMELGTKRADAVLHDTPNIL-YFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRV 219

Query: 240 IVSWTHY 246
            V+    
Sbjct: 220 KVNGALK 226


>gi|166366371|ref|YP_001658644.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
 gi|166088744|dbj|BAG03452.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
          Length = 299

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 111/307 (36%), Gaps = 22/307 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    V + C++ +F  S S   +++  + + GFL  G     + ++ +   G+  G+
Sbjct: 1   MKKILQLVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYIDDKGELVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +   +      P  +Q +  N     + L       ++ +T +T  R     +
Sbjct: 61  SMDVLERIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGEIDIACSTAFTWERAKV--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G   +  K   +S+   L G  I +   +     +               +
Sbjct: 119 DFSISYSISGIRILAKKGSNLSTPQSLIGKRIALVPTSAAVDVIKLVQPQA---TIVTTY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDT 235
             VEE   A +  + DA  GD  +L    L  D P  + I+P+    +  +A  + + ++
Sbjct: 176 STVEEAIEALKTGKIDAIAGDSISLAGTILR-DNPKIYEIVPEEALANFGIACMVPENNS 234

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
            + + V++          + + Q  I       T   + R+ G      I   L L   +
Sbjct: 235 TFLDDVNYAI--------VKMMQDYITN--DTATVSQIDRWFGSQGMVPIPPEL-LKGFF 283

Query: 296 TYRIIRH 302
            +++I H
Sbjct: 284 AFKVIEH 290


>gi|312963937|ref|ZP_07778408.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311281972|gb|EFQ60582.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 273

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 25/259 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M     ++ L L +L  ++ +   + L  ++++  L  G+       F+ +       GF
Sbjct: 1   MKLKPLLA-LGLTMLAASTQAFGGATLDRVEQKKEL-VGVLMESYPPFSFLNDQNQLDGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  +A++  +      ++    +         S + DI   +   +  R       F 
Sbjct: 59  DVDVAKAVAQKLGVK---LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFP 113

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---------- 168
              Y      +++     I + + LSG  + + + ++ E  L                  
Sbjct: 114 VEYYASPAVIVVNATDDRIHNAADLSGKKVGLTSASSYESYLNKNLVIEGAEDKQLRYPF 173

Query: 169 MKYHPIVFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                  ++               R DA   +   L   +    +     +  + +   P
Sbjct: 174 ENVQIAPYDTDNVAFQDLGLGAGVRLDAILTN---LVTAQPRLSQDKRFKLAGEPLYSEP 230

Query: 226 LAPAIIQGDTEWYNIVSWT 244
            + AI +GD +W + V   
Sbjct: 231 NSVAIEKGDPQWDSKVREV 249


>gi|302023526|ref|ZP_07248737.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus suis 05HAS68]
          Length = 278

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K    ++  +  L   +      +T +      +    +  G +   V     + +G +
Sbjct: 4   KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D   A+          +++ P++   +   L +  ID++      T  R+    +
Sbjct: 64  TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173
            F      + Q  +  K   IS VS +    +  QAG++            K        
Sbjct: 119 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +    E     +  R D    D              +++ I+         A    + 
Sbjct: 179 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 238

Query: 234 DTEWYNIVSWT 244
           DT     ++  
Sbjct: 239 DTTLVENINKA 249


>gi|229068524|ref|ZP_04201825.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           F65185]
 gi|229078175|ref|ZP_04210750.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock4-2]
 gi|228705121|gb|EEL57532.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           Rock4-2]
 gi|228714666|gb|EEL66540.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           F65185]
          Length = 265

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYAPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|228951347|ref|ZP_04113456.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229177390|ref|ZP_04304773.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           172560W]
 gi|228606113|gb|EEK63551.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           172560W]
 gi|228808284|gb|EEM54794.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 265

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F V  +  + +   +         + +   L  IK+ G L  G       F    +
Sbjct: 1   MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYAPFTFHDS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+    ++  +   P    +           L +K+ D+++         + 
Sbjct: 61  SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F           ++ K     ++ + + G     Q+ T+     AD  K +    
Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             I  E   +      + R D    D  ++     T       ++  +  +         
Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228

Query: 232 QGDTEWYNIVSWTH 245
           +G T+    V    
Sbjct: 229 KGSTKLVQEVDKAL 242


>gi|229915827|ref|YP_002884473.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
 gi|229467256|gb|ACQ69028.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
          Length = 255

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 83/257 (32%), Gaps = 17/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD-WKG 58
           M K      L +  +   + S      G+  ++  L  G +     +  V  ANGD   G
Sbjct: 1   MKKWLLAFTLMMSAVLLGACSQE--TEGEATEQKTLVMGTSADYFPYEFVDTANGDAIVG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++    ++  +  +   ++   ++      AL S ++D +      T  R+      F
Sbjct: 59  FDIEIAETITERLGYE---LKIEDMDFGSLLGALNSGRVDFVMAGMTPTEERKE--NADF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I        +   +  + ++  LSG  I VQ  +  E    +           +   +
Sbjct: 114 SDIYLSATNLIMTKDES-LQAIEDLSGKKIGVQTASIQENIAKEQAP----DAELVSLNK 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI       R DA   + +         D+                + A  + D E  
Sbjct: 169 IPEIVQELNTGRIDAMVIEDTVAQKY---LDQDDSFYTFALKEDGEKGSAAAFKLDDELR 225

Query: 239 NIVSWTHYAMVTAEELG 255
           +  +     M+ + E+ 
Sbjct: 226 DQFNEELNKMMESGEID 242


>gi|70731863|ref|YP_261605.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas
           fluorescens Pf-5]
 gi|68346162|gb|AAY93768.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas
           fluorescens Pf-5]
          Length = 258

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 85/265 (32%), Gaps = 23/265 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLVLLGALALSVLSLPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCVWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTN 105

Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     IS  +++L G +I VQ G+  E    +             +   
Sbjct: 106 KYYNTPARLVMKAGTQISDGLAELKGKNIGVQRGSIHERFAREVLAPLG--AQIKPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    +           A+ +GD
Sbjct: 164 NEIYLDVAAGRLDGTVADATLLNDGFLKTDAGKGFAFVGPAFTDVKYFGDGVGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
               + ++    A+    +    Q 
Sbjct: 224 KADLDKINAAIAAIRENGKYKQIQD 248


>gi|24379272|ref|NP_721227.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus mutans UA159]
 gi|290580723|ref|YP_003485115.1| putative amino acid transporter amino acid-binding protein
           [Streptococcus mutans NN2025]
 gi|24377189|gb|AAN58533.1|AE014922_8 putative amino acid transporter, amino acid-binding protein
           [Streptococcus mutans UA159]
 gi|254997622|dbj|BAH88223.1| putative amino acid transporter amino acid-binding protein
           [Streptococcus mutans NN2025]
          Length = 271

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 80/253 (31%), Gaps = 18/253 (7%)

Query: 2   YKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      +S + +  L   S S + ++  DIK++  L   ++     F     V     
Sbjct: 3   FKKLVLGLLSFVAVFTLVACSSSNSKNLQDDIKEKKKLVVAVSPDYAPFEFKALVNGKDT 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+D  +A++  +      ++   ++      +L++ + DI      +T  R  +  
Sbjct: 63  VVGADIDLAKAIAKELGVK---LELSSMSFDNVLSSLKTGKADIAISGLSYTKER--AQA 117

Query: 116 LAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
             F    Y      ++ K          S  +   + VQ GT  E    +  K    + +
Sbjct: 118 YDFSEAYYKTENAILIKKSDLNKYTMISSFNNKTKVAVQKGTIEEGLAKNQLK----QSN 173

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 + E     ++ + DA   +          N       +          A A+ +
Sbjct: 174 ITSLTSMGEAVNELKSGQVDAIDLEKPVAEGYVSQNSDLVLAKVALKTGEGDAKAVALPK 233

Query: 233 GDTEWYNIVSWTH 245
              +    V+   
Sbjct: 234 DSGQLVKTVNKVI 246


>gi|261253295|ref|ZP_05945868.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
 gi|260936686|gb|EEX92675.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
          Length = 256

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 77/224 (34%), Gaps = 14/224 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +   K    ++ GI      F+  +A+G  KGFDVD   AL   +     K + +P +  
Sbjct: 18  VAQAKDWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEM---QVKCKIVPQDWD 74

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               +L +++ D +      T  R+    + F          FI  K  G+     L G 
Sbjct: 75  GIIPSLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-DFDNLDGQ 131

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL    L
Sbjct: 132 KIAVQRATTHDKYLTDNY---GDKVSIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188

Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
                  +  +   ++           A+ + D +    +    
Sbjct: 189 NKAGGEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232


>gi|260363802|ref|ZP_05776557.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus K5030]
 gi|260876938|ref|ZP_05889293.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus AN-5034]
 gi|260897920|ref|ZP_05906416.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus Peru-466]
 gi|308085463|gb|EFO35158.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus Peru-466]
 gi|308093844|gb|EFO43539.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus AN-5034]
 gi|308113879|gb|EFO51419.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus K5030]
          Length = 256

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K Q +  +
Sbjct: 16  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 72

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +   + L 
Sbjct: 73  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 129

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 130 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 187 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 232


>gi|238024846|ref|YP_002909078.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain-containing protein
           [Burkholderia glumae BGR1]
 gi|237879511|gb|ACR31843.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Burkholderia
           glumae BGR1]
          Length = 269

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 11/228 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
              + +A  L  I K G L+  +      F  V A+   +G+D+D    L+ A+    +K
Sbjct: 28  GVSAAHADALDSITKSGVLRVAVPEDYPPFGSVGADMQPQGYDIDTAGLLAKALG---AK 84

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +Q +P+N+  R   L + ++D++  +   T  RE    + F        QG        +
Sbjct: 85  LQLVPVNSANRIPYLTTNKVDLVISSLGKTPEREKV--IDFSAAYGPYFQGVFGPADLKV 142

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           S  + L+G ++    G   E+ L+              FE       A+ + +       
Sbjct: 143 SGPADLTGKTVGATRGALEEIALSQMAP----NATIKRFEDNNATIQAFLSGQVQLIAAG 198

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                A+      P        +I  SP    + + +      V+   
Sbjct: 199 NIVAAAILA--KNPPRRPETKFVIKNSPCFVGLNKNEPRLLAKVNAAI 244


>gi|225571602|ref|ZP_03780598.1| hypothetical protein CLOHYLEM_07700 [Clostridium hylemonae DSM
           15053]
 gi|225159679|gb|EEG72298.1| hypothetical protein CLOHYLEM_07700 [Clostridium hylemonae DSM
           15053]
          Length = 261

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGD 55
           M     VS+L +     +  +  +           K +  L    N     +     + D
Sbjct: 3   MKLKKLVSVLLVGACVVSLAACGSDKKEKSDDGDKKSKDTLVMATNAEFPPYEFRDGD-D 61

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D +  +A++  +     +++   +       A+ S + D  +     T  R+    
Sbjct: 62  VVGIDAEVAQAIADKLG---MELKIEDMAFDSIIPAVTSGKADFGAAGLTVTDERKE--N 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F        Q  ++ +   ++    L+G  I VQ GTT ++   D   A         
Sbjct: 117 VDFTDTYAKATQVIMVKEDSKVAGPDDLTGKKIGVQLGTTGDIYAGDIEDA-----EVER 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           + +  E   A +  + DA   D       K    +     IL +  ++   A A+ +G+ 
Sbjct: 172 YNKGFEAVQALQQGKIDAVVID---GEPAKEFVKQAEGIKILDEAFTEEEYALAVDKGNE 228

Query: 236 EWYNIVSWTHY 246
           +    ++    
Sbjct: 229 DLLGKINDALN 239


>gi|153837350|ref|ZP_01990017.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AQ3810]
 gi|260903455|ref|ZP_05911850.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus AQ4037]
 gi|149749381|gb|EDM60154.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AQ3810]
 gi|308110371|gb|EFO47911.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Vibrio parahaemolyticus AQ4037]
          Length = 256

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K Q +  +
Sbjct: 16  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 72

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +   + L 
Sbjct: 73  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 129

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 130 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 187 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 232


>gi|126737005|ref|ZP_01752740.1| probable amino acid ABC transporter, substrate-binding protein
           [Roseobacter sp. SK209-2-6]
 gi|126721590|gb|EBA18293.1| probable amino acid ABC transporter, substrate-binding protein
           [Roseobacter sp. SK209-2-6]
          Length = 280

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 80/257 (31%), Gaps = 21/257 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            +     +   + + F+  +  A   L  I   G L  G N+     + +  N +  GFD
Sbjct: 7   RRTAIKGLAAALSVSFSGLAAQAGETLDRILSDGVLTVGTNSDYRPNSFMNDNNELDGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   + +++ +  D   ++++    +       + + D++  +   T  R     L F  
Sbjct: 67  IAVSKEVAARLGVD---VKFVTPGWEVMTAGRWAGRWDMVVGSMTPTKARAEV--LDFPA 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-------AHNMKYHP 173
           I YF    F +HK         L G  + V + +T    L    K       A      P
Sbjct: 122 IYYFSPAAFAVHKTSSAEKPGDLDGKIVGVVSASTYNRYLEHDLKLDVVGMPAFTYDVTP 181

Query: 174 IVFERVEEI--DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  ++            R  A    +  +               L + +   PLA 
Sbjct: 182 GEIRAYSDVNEFDDLALGDGARLHAVLQSVPVIGEAVAV---GLPIKQLGEPVFFEPLAL 238

Query: 229 AIIQGDTEWYNIVSWTH 245
           A  +GD E    +    
Sbjct: 239 ATDKGDAELNARLHNII 255


>gi|317122404|ref|YP_004102407.1| extracellular solute-binding protein family 3 [Thermaerobacter
           marianensis DSM 12885]
 gi|315592384|gb|ADU51680.1| extracellular solute-binding protein family 3 [Thermaerobacter
           marianensis DSM 12885]
          Length = 296

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 15/224 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           S+L +IK+RG++    +              G+  GFD+D  +A++  +  +    +   
Sbjct: 65  SLLDEIKERGYMTFATDGAYPPMEFPDPENPGELIGFDIDLGKAIAEKLGVEY---RVEV 121

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141
              +     L++++ D +    + T  R+      F           +     +GI S+ 
Sbjct: 122 AEWEGLLAGLEARRFDAVMSAMNITEERQK--SADFVQYFEMGQMIVVPKGNPQGIQSLD 179

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  I VQ GTT E        A         ++   +      A R DA   D    
Sbjct: 180 DLKGKVIAVQIGTTNEEIARGIEGA-----TVKTYQTFPDALQEVAAGRADATILDEPVA 234

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                      E+V +P     +P+  A+ +G+ E    V    
Sbjct: 235 RYYANIEGDKYEYVGVP--FETAPVGIALPKGEDELVQAVQQAL 276


>gi|161502500|ref|YP_001569612.1| hypothetical protein SARI_00544 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863847|gb|ABX20470.1| hypothetical protein SARI_00544 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDVGNEMCQRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++      + + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKG--VNVVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A   A          ++++K   + +V
Sbjct: 226 TELKA-------AFDKALAELREDGTYDKMAKKYFDFNV 257


>gi|55823258|ref|YP_141699.1| ABC transporter substrate binding protein [Streptococcus
           thermophilus CNRZ1066]
 gi|55739243|gb|AAV62884.1| ABC transporter substrate binding protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 270

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 92/245 (37%), Gaps = 20/245 (8%)

Query: 1   MYKDFFVSILCLIILFFTS-----FSTNASILGDIKKR----GFLKCGINTGLVGFAEVK 51
           M K    +I+ +I +   +      ++ +     + K       L+          +   
Sbjct: 1   MKKKSIFAIVGIIFIAVIAYFGYQTASGSKTTQTVSKSSSNEKVLRVATTGVSFPGSYKD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           +NGD  GFDV+  RA+   I      ++++  +    F  LQS ++D ++ +   T  R+
Sbjct: 61  SNGDLTGFDVEIARAVGKKIGYK---VEFITTSFDGLFGLLQSGKVDAVASSIAITDERQ 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F         G ++ K   +++++++ G ++    G+     +     A++   
Sbjct: 118 K--SYDFTTPYATFQYGVVVKKDSSLTNINEIGGHTLAATVGSNQIKVVN----AYDPSI 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               F+  E         + D Y+   + L A+     +  +  IL   + +  +A A  
Sbjct: 172 QIQTFDDREAALTGVTNGQVDGYSNSKTILSAIIKQ--KNLDLKILDGELGQENIAIAFN 229

Query: 232 QGDTE 236
           +G  +
Sbjct: 230 KGKNK 234


>gi|331003247|ref|ZP_08326754.1| hypothetical protein HMPREF0491_01616 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412900|gb|EGG92280.1| hypothetical protein HMPREF0491_01616 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 263

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 26/257 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG------------DIKKRGFLKCGINTGLVGFA 48
           M K     ++  +++   +    +                   + G L    N     + 
Sbjct: 1   MKKKILALLITGLMVASLAACGGSKRADTKPGSENADGSVKTIQSGKLVVATNAEFPPYE 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             + +    G D++   A++  +     +++   +      L + S + D        T 
Sbjct: 61  YHEGD-KIVGIDMEIADAIAKKMG---LELEIEDIAFDSVILEVTSGKADAGVAGISATE 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F        Q  I+ +   ++S + L G ++ VQ GTT +L  +D   A  
Sbjct: 117 ERK--QSVDFSDTYTTSKQLIIVKEDSKVASGADLEGKTVGVQTGTTGDLLASDIKDA-- 172

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  + +  +   A    + DA   D       K   +  S   IL +  ++   A 
Sbjct: 173 ---TVERYAKGMDAVQALSQGKIDAVVID---SEVAKKFVEETSGLKILDEAYAEEQYAI 226

Query: 229 AIIQGDTEWYNIVSWTH 245
           AI +G+ E  + V+   
Sbjct: 227 AIKKGNKELLDGVNKAL 243


>gi|37528305|ref|NP_931650.1| hypothetical protein plu4484 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787743|emb|CAE16856.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 257

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 70/250 (28%), Gaps = 14/250 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K     +L   I F   +S NA   L  IK  G L+         F    A+G   GFDV
Sbjct: 2   KTLITLLLANTIQFGLVYSANAEPTLDKIKSTGTLRIATEGAYPPFTYRDASGTLTGFDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R ++  +   P    ++          L + + D +      T  R+      F   
Sbjct: 62  DIGREIAHRLHVKP---TFIEGKWDGLIAGLDAGRSDAVINQIAITPERKK--KYDFSIP 116

Query: 122 TYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I   S L G +       T     A   + +      I      
Sbjct: 117 YITSQAVLIINKNNNNIRKFSDLKGKTSA----HTLTNNFAQIARDNG--AEIIGTNGFS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        R DA   D  +    K         ++     +    A  + +G+ E    
Sbjct: 171 QEIELVSTGRADATINDSLSYLDYKKHKPNAPVKIVAATPNAGQ-TAVLLRKGEPELKVA 229

Query: 241 VSWTHYAMVT 250
           +      + T
Sbjct: 230 IDQAITDIKT 239


>gi|292487346|ref|YP_003530218.1| putative ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|292898591|ref|YP_003537960.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291198439|emb|CBJ45547.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291552765|emb|CBA19810.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
 gi|312171452|emb|CBX79710.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 261

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 103/289 (35%), Gaps = 30/289 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L   +LF       A  L D++KRG L+  +      F  V  +   +G+D
Sbjct: 1   MKKG-LSTLLAAALLFSQISVVQADQLQDVEKRGVLRVAVPQDFPPFGSVGTDLQPQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    + F  
Sbjct: 60  IDMATYLAKQM---KLKLQLVPVTSANRVPYLQTGKVDLVISSLGKNPEREKV--IDFSR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +   + LSG S+ V  G   ++ L               +E   
Sbjct: 115 AYAPFFLGVFGAKPGALKDAAGLSGKSVGVTRGAVEDMVLTSVAPK---DAQVKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALY--ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +AY + +          +   A +  +  P    +L D     P    + +G+    
Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAIARQQADKAPVAQFMLKDS----PCFIGMKKGEPALK 227

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
             V           E  +  K +N++++        R+L     +++G 
Sbjct: 228 AKVDALI-------EQALKDKTLNRLAE--------RWLKAPLPADLGA 261


>gi|167759819|ref|ZP_02431946.1| hypothetical protein CLOSCI_02182 [Clostridium scindens ATCC 35704]
 gi|167662438|gb|EDS06568.1| hypothetical protein CLOSCI_02182 [Clostridium scindens ATCC 35704]
          Length = 260

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 18/258 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILG----DIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K   V ++   +    +  +              +  L    N     +   + + D  
Sbjct: 4   KKLVSVLLVAACVFSLAACGSKDDSKDSGDSKKDSKDTLVMATNAEFPPYEFHEGD-DVV 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D D  RA+   +     +++   +       A+ S + D  +     T  R+    + 
Sbjct: 63  GIDADIARAIGEEMG---MEVKIEDMAFDSIIPAVTSGKADFGAAGMTVTEDRKK--NVD 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F        Q  I+ +   I+    L+G  I VQ GTT ++   D   A         + 
Sbjct: 118 FTDTYATATQVIIVKEGSDIAGPDDLTGKKIGVQLGTTGDIYADDIEDA-----EVERYN 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E   A    + DA   D       K          IL +  ++   A A+ + + + 
Sbjct: 173 KGFEAVQALTQDKIDAVVID---GEPAKEFVAEADGLKILDEAFTEEEYAIAVAKDNDDL 229

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++    ++  + ++ 
Sbjct: 230 LKKMNEALASLKESGKID 247


>gi|322831959|ref|YP_004211986.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rahnella sp. Y9602]
 gi|321167160|gb|ADW72859.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rahnella sp. Y9602]
          Length = 260

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F V  L L+++  ++ S  A++   I        G +     F    ++G   GFD
Sbjct: 1   MKKLFKV--LPLVLVLASAGSAFAAVPKAI------NIGTDPTYAPFESKDSSGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +         K  Y+  +      +L++K+ID +  +   T  R     + F  
Sbjct: 53  IDLANEMCKRA---AIKCTYVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIDFTE 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   +      L G ++ V  G+T E      ++   +  + + ++  
Sbjct: 108 KLYAANARLIAPKGSKVLPTLDALKGKNVGVLQGSTQEAYANAMWQPKGI--NVVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   + R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYADLASGRLDAAFQDEVAGSEGFLKQAAGKDYAFAGPSVKDDKFFGVGTGMGLRKTD 225

Query: 235 TEWYNIVSWTHYAM 248
           T+  + ++    +M
Sbjct: 226 TDLKDALNKAFDSM 239


>gi|227872731|ref|ZP_03991056.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Oribacterium sinus F0268]
 gi|227841426|gb|EEJ51731.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Oribacterium sinus F0268]
          Length = 286

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 84/270 (31%), Gaps = 37/270 (13%)

Query: 1   MYKDFFVSILCLIILFF----------TSFSTNASILGDIKKRG--------------FL 36
           M K   ++ L  + L            T+  + A      + RG               L
Sbjct: 11  MKKYLLIAALAGLSLVACGGSKGSTEGTAKGSEAGTEQGNQARGSKETDSAKAEAKGGTL 70

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               N     +   +   D  G DVD   A++  +     K++   +       A+QS +
Sbjct: 71  IMATNAEFPPYEYHEGK-DIVGIDVDIAEAIAEEMG---MKLEISDIAFDAIIPAVQSGK 126

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D  +         +    + F        Q  I+ +   IS +  L G  + VQ GTT 
Sbjct: 127 ADFGAAGMTVNE--DRLKNVDFSDSYATSVQSVIVTEDSSISKIDDLKGKKVGVQQGTTG 184

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +L   D             F +  +   A +A + DA   D +        N       +
Sbjct: 185 DLYSTDDLGEK----SVERFPKGADAVQALQAGKVDAVIIDKNPAEVFVSQNKG---LKL 237

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           L    ++   A  + +G+TE    ++    
Sbjct: 238 LDSAYAEEDYAICVKKGNTELVEKINAALK 267


>gi|296272604|ref|YP_003655235.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096778|gb|ADG92728.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 260

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 92/255 (36%), Gaps = 10/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K+  + +L +  L   S   NA+ L DIKK G +K  +      F  V  +   +G+D
Sbjct: 1   MFKNVLLKVLAIGALLSVSLL-NANQLADIKKSGVIKIAVPQDFAPFGSVSKDMSIQGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +      I    + +  R   LQ+ ++++   +      R     + F  
Sbjct: 60  VDTAKLIAKKLGVKLELIP---VASANRIPYLQTGKVNLTISSLGKNPERAR--AIDFSD 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G    K   +SS + L G ++ V  GT  ++ L+      +       +E   
Sbjct: 115 AYAIFYLGVFGSKDVKVSSPADLKGKTVGVTRGTIEDIELSKLV---DPSVTIKRYEDNN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +++ + +          +  +   N    E +    +I  +P    I + + E    
Sbjct: 172 MTTSSFLSGQVKLIATGNVIVSEMARKNPGKEEAMT-KFMIVNNPCYIGIKKHEPELMAF 230

Query: 241 VSWTHYAMVTAEELG 255
           ++          +L 
Sbjct: 231 INKFIKENKENGKLN 245


>gi|296159865|ref|ZP_06842686.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295889848|gb|EFG69645.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 274

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 80/249 (32%), Gaps = 17/249 (6%)

Query: 3   KDFFVSILC------LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           +  F ++        L  L     + +A  L  I K G ++ G+      F  +  +   
Sbjct: 12  RRVFATLAATLAFTGLGALCALPSAAHADALDTIAKSGTVRIGVFEDYPPFGSIGPDMKP 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D+D    +  A+    +K++ + +    R   L   + D+L      T  RE    +
Sbjct: 72  MGYDIDVANLIGRAL---NAKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--I 125

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F              K   + + + L+G SI V  GT  +L++           +   F
Sbjct: 126 DFSQPYAPYYLAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRF 182

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +      +A+ + +             +      P+        +  SP    + + +  
Sbjct: 183 DDPNGAISAFLSGQVQLMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPR 240

Query: 237 WYNIVSWTH 245
               V  T 
Sbjct: 241 LKQKVDETI 249


>gi|188534334|ref|YP_001908131.1| glutamine ABC transporter periplasmic protein [Erwinia tasmaniensis
           Et1/99]
 gi|188029376|emb|CAO97253.1| Glutamine high-affinity transporter [Erwinia tasmaniensis Et1/99]
          Length = 248

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F VSI  L + F  S +              L    +T  V F   + +G + GFD
Sbjct: 1   MKSIFKVSIAALTLAFSLSSTAAE---------KKLVVATDTAFVPFEFKQ-DGKYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  +       P++      ALQ++ ID+       T  R+    +AF  
Sbjct: 51  VDLWDAIAKQLNMEY---TLKPMDFSGIIPALQTRNIDLALAGITITDERKK--AIAFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      +  +  L+G  + V++GT +      + K          F  +
Sbjct: 106 GYYKSGLLVMVKANNDSVKGIDDLNGKVVAVKSGTGSVDYAKQHIKYK----DLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T  +  +   + D I       A  +G  +   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFINTAGKG-QFKAVGDSIEAQQYGIAFPKGSDDLRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|91211606|ref|YP_541592.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli UTI89]
 gi|117624500|ref|YP_853413.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           APEC O1]
 gi|218559223|ref|YP_002392136.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli S88]
 gi|237704787|ref|ZP_04535268.1| lysine/arginine/ornithine transporter subunit [Escherichia sp.
           3_2_53FAA]
 gi|91073180|gb|ABE08061.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli UTI89]
 gi|115513624|gb|ABJ01699.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           APEC O1]
 gi|218365992|emb|CAR03736.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli S88]
 gi|226901153|gb|EEH87412.1| lysine/arginine/ornithine transporter subunit [Escherichia sp.
           3_2_53FAA]
 gi|294489449|gb|ADE88205.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli IHE3034]
 gi|307626153|gb|ADN70457.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli UM146]
 gi|315285928|gb|EFU45366.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 110-3]
 gi|323952103|gb|EGB47977.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H252]
 gi|323956076|gb|EGB51829.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H263]
          Length = 260

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDTIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKALN------ELRQDGT-YDKMAKKYFDFNV 257


>gi|72161213|ref|YP_288870.1| extracellular solute-binding protein [Thermobifida fusca YX]
 gi|71914945|gb|AAZ54847.1| extracellular solute-binding protein, family 3 [Thermobifida fusca
           YX]
          Length = 285

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 8/215 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G+     G   ++ N    GFDVD    ++  +   P +I++    +  R   LQ 
Sbjct: 42  TITIGVKYDQPGLGLLEGN-KPVGFDVDVATYIAGELGYSPDQIEWTEAASANRETFLQQ 100

Query: 95  KQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
             +D++      T  R+    + F  P         +      I     L G  +C  +G
Sbjct: 101 GTVDMIVATYSITDERK--NVVDFAGPYYIAQQDIIVSADNTDIQGPEDLEGKVLCSASG 158

Query: 154 TTTELTLAD--YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           + +   + D        +           E          DA T D + L         P
Sbjct: 159 SRSANNIVDSEENGGLGIGAELREAGNYSECMELLANGTVDAVTTDNTILAGFAAQ--NP 216

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + ++ +   +      + +G TE    V+    
Sbjct: 217 DAYRMVNNPFGEEKYGVGLPKGSTEMCEKVNEAIT 251


>gi|328473251|gb|EGF44099.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 10329]
          Length = 258

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K Q +  +
Sbjct: 18  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +   + L 
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 189 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 234


>gi|318081102|ref|ZP_07988434.1| sugar-binding protein [Streptomyces sp. SA3_actF]
          Length = 346

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 17/225 (7%)

Query: 33  RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           RG L  G++     +         N D +GFD+D   A++  +  DP  +    +    R
Sbjct: 91  RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 150

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGAS 147
             A+    +D++ R    T  R     ++F    +   Q  I+ +   +   +  L+G  
Sbjct: 151 VQAVADHDVDMVVRTMTITCRR--LKDVSFSTPYFRTTQRIIVPRGSSVDGFNASLTGKR 208

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C    +T E  L + FK    K   +      +     +    DA   D +        
Sbjct: 209 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 265

Query: 208 NDRPSEHVILPDIISK-------SPLAPAIIQGDTEWYNIVSWTH 245
           +          +                A+ Q   +    V+   
Sbjct: 266 DPSLDMQGGPDENNPADRDSPAWEYYGIAMNQDSPQLVARVNKIL 310


>gi|28897773|ref|NP_797378.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805986|dbj|BAC59262.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
          Length = 258

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K Q +  +
Sbjct: 18  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +   + L 
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 189 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 234


>gi|237786244|ref|YP_002906949.1| putative extracellular solute-binding protein [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237759156|gb|ACR18406.1| putative extracellular solute-binding protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 370

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 78/208 (37%), Gaps = 10/208 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI +RG +  G+++ L        + G+ +GFDV   R ++  IF DP +I +  L++ E
Sbjct: 119 DIVRRGRIIVGVSSSLNFLGFQDPSSGNLEGFDVSLAREIARDIFGDPERIDFRFLSSAE 178

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  ALQ   +DI+ R       RE    +AF           +      I S   L  A+
Sbjct: 179 RVDALQHGNVDIVVRTMTI--DRERRAKVAFSAPYLHAQARILASTSSSIQSADDLRDAT 236

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV   +T +                ++     +   A + H+  A   D S L  L   
Sbjct: 237 VCVPKDSTFQHNAQVIAP----HSRFLITNDWSDCLVAMQQHQVQAIISDDSILSGLAAQ 292

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +       ++      S  A  I +   
Sbjct: 293 DSN---THLVGQPYGSSDYAVGIAKTTP 317


>gi|15965623|ref|NP_385976.1| putative amino-acid binding periplasmic protein [Sinorhizobium
           meliloti 1021]
 gi|307314027|ref|ZP_07593640.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|307321204|ref|ZP_07600606.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|15074804|emb|CAC46449.1| Putative amino-acid binding periplasmic protein [Sinorhizobium
           meliloti 1021]
 gi|306893106|gb|EFN23890.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306899149|gb|EFN29788.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 260

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 84/252 (33%), Gaps = 23/252 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    +    + +     +              +  G       F  ++++G   GFD+D
Sbjct: 5   RRLAATASAAVFVLMAGVAMAEGE--------KVVIGTEGAYPPFNNLESDGTLTGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL   +    ++  ++  +      AL +K+ D +  +   T  R+    + F    
Sbjct: 57  IAKALCEEM---KAECTFVTQDWDGIIPALIAKKFDAIVASMSITEERK--QQVDFTNKY 111

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y      ++ K   I+  + + LSG ++  Q  TT       + K         ++   +
Sbjct: 112 YNTPPAIVVPKDSPITEATAAALSGKALGAQGSTTHSNYAEAHMKE----SEVKLYPTAD 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDTE 236
           E        R DA   D+  L     T D         + +  +I+      AI +GD  
Sbjct: 168 EYKLDLANGRIDAAIDDVVVLSEWLKTEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDA 227

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 228 LREKLNKAIEAI 239


>gi|84393751|ref|ZP_00992499.1| ABC-type amino acid transport, signal transduction system,
           periplasmic component/domain [Vibrio splendidus 12B01]
 gi|84375613|gb|EAP92512.1| ABC-type amino acid transport, signal transduction system,
           periplasmic component/domain [Vibrio splendidus 12B01]
          Length = 256

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 80/224 (35%), Gaps = 14/224 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +   K+   ++ GI      F+  +A+G  KGFDVD   AL + +     + + +  +  
Sbjct: 18  VAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVQCKIVAQDWD 74

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               +L +++ D +      T  R+    + F          FI  K  G+ +   LSG 
Sbjct: 75  GIIPSLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-NFDDLSGQ 131

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I VQ  TT +  L D +         + +   +E        R  A  GD SAL    L
Sbjct: 132 KIAVQRATTHDKYLTDNY---GDTVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188

Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
                 ++  +   ++           A+ + D +    +    
Sbjct: 189 NKAGGEDYEFVGPSLTDPKWFGDGFGIALRKQDKDLTKQLDAAI 232


>gi|255527867|ref|ZP_05394714.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|255508449|gb|EET84842.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
          Length = 178

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 12/183 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K     ++ +  L               +   +I+++G    G++            G
Sbjct: 1   MKKKLVFLVIAIFTLGLLISGCGKKEQATDNSWKEIQQKGKFVLGLDDSFPPMGFKDDKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D  +  +  +      ++  P+      L+L +K ID++      T  R    
Sbjct: 61  QIIGFDIDMAQEAAKRMGVK---VELKPVQWDGVLLSLNNKDIDVIWNGLTITDKR--KQ 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHP 173
            +AF  +   + Q  + +    I +   L+G  + +Q G+++E  L AD   A ++K + 
Sbjct: 116 QIAFSKVYLQNKQIIVTNNDSNIKTKKDLAGKKVGLQLGSSSETALNADSATAKSIKENK 175

Query: 174 IVF 176
            +F
Sbjct: 176 KIF 178


>gi|318060368|ref|ZP_07979091.1| sugar-binding protein [Streptomyces sp. SA3_actG]
          Length = 375

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 17/225 (7%)

Query: 33  RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           RG L  G++     +         N D +GFD+D   A++  +  DP  +    +    R
Sbjct: 120 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 179

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGAS 147
             A+    +D++ R    T  R     ++F    +   Q  I+ +   +   +  L+G  
Sbjct: 180 VQAVADHDVDMVVRTMTITCRR--LKDVSFSTPYFRTTQRIIVPRGSSVDGFNASLTGKR 237

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C    +T E  L + FK    K   +      +     +    DA   D +        
Sbjct: 238 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 294

Query: 208 NDRPSEHVILPDIISK-------SPLAPAIIQGDTEWYNIVSWTH 245
           +          +                A+ Q   +    V+   
Sbjct: 295 DPSLDMQGGPDENNPADRDSPAWEYYGIAMNQDSPQLVARVNKIL 339


>gi|215487523|ref|YP_002329954.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218700786|ref|YP_002408415.1| lysine/arginine/ornithine ABC transporter subunit
           periplasmic-binding protein [Escherichia coli IAI39]
 gi|300936888|ref|ZP_07151775.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 21-1]
 gi|312967610|ref|ZP_07781825.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 2362-75]
 gi|331658393|ref|ZP_08359355.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA206]
 gi|331673813|ref|ZP_08374576.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA280]
 gi|215265595|emb|CAS09998.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218370772|emb|CAR18585.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli IAI39]
 gi|222034066|emb|CAP76807.1| Lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli LF82]
 gi|300457999|gb|EFK21492.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 21-1]
 gi|312287807|gb|EFR15712.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 2362-75]
 gi|312946929|gb|ADR27756.1| lysine/arginine/ornithine transporter subunit; periplasmic-binding
           component of ABC superfamily protein [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315298157|gb|EFU57421.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 16-3]
 gi|320196178|gb|EFW70802.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli WV_060327]
 gi|323187965|gb|EFZ73260.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli RN587/1]
 gi|331056641|gb|EGI28650.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA206]
 gi|331069086|gb|EGI40478.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA280]
          Length = 260

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKALN------ELRQDGT-YDKMAKKYFDFNV 257


>gi|167750530|ref|ZP_02422657.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702]
 gi|167656456|gb|EDS00586.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702]
          Length = 294

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 111/304 (36%), Gaps = 35/304 (11%)

Query: 1   MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40
           M K  F  ++ L +        FT+  TNA+               L +IK  G +  G+
Sbjct: 1   MKKLNFKKLIALGLTAAAAVASFTACGTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
            +    F  V  NG+++G+D+ F   L   +  +   I Y+   A  R   L++ ++DI+
Sbjct: 61  FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELT 159
             N   T  R     + F         G +      I+S+ +  +   + V +GTT EL 
Sbjct: 118 LANFTVTEERAE--KVDFALPYMNVALGVVSPDSNVITSLDNWKAEDRMIVISGTTAELY 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L      +        ++      +A       A+  D + + A           V +  
Sbjct: 176 LT----KNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQ--NKGYTVGIDS 229

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
           + S+  +APA+ +G+    N ++     +    +      + +    DT   D +  L +
Sbjct: 230 LGSQDTIAPAVSKGNETLLNWINDEIKTL---GKENFFHADYDATLTDTYGADYKETLVV 286

Query: 280 DKSS 283
           +   
Sbjct: 287 EGGE 290


>gi|146318206|ref|YP_001197918.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus suis 05ZYH33]
 gi|146320400|ref|YP_001200111.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus suis 98HAH33]
 gi|145689012|gb|ABP89518.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus suis 05ZYH33]
 gi|145691206|gb|ABP91711.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus suis 98HAH33]
 gi|292558007|gb|ADE31008.1| ABC transporter substrate-binding protein [Streptococcus suis GZ1]
 gi|319757674|gb|ADV69616.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus suis JS14]
          Length = 280

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K    ++  +  L   +      +T +      +    +  G +   V     + +G +
Sbjct: 6   KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 65

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D   A+          +++ P++   +   L +  ID++      T  R+    +
Sbjct: 66  TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173
            F      + Q  +  K   IS VS +    +  QAG++            K        
Sbjct: 121 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 180

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +    E     +  R D    D              +++ I+         A    + 
Sbjct: 181 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 240

Query: 234 DTEWYNIVSWT 244
           DT     ++  
Sbjct: 241 DTTLVENINKA 251


>gi|293607249|ref|ZP_06689590.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
 gi|292814341|gb|EFF73481.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
          Length = 269

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 76/254 (29%), Gaps = 14/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  LI     + +   S L  IK  G  K G       F    A+G   GFD
Sbjct: 10  MKLFRSLFIAGLIQAAALTAAHAQSGLEQIKSAGTFKIGTEGTYAPFTFHDASGQLTGFD 69

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +       Q++          L +K+ D +      T  R+      F  
Sbjct: 70  VDIGRAIAERLGVKA---QFVEGKWDGLIAGLDAKRYDAVINQVGITDARKA--KYDFSD 124

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I S   L G        T+    LA    A       +  +  
Sbjct: 125 PYISSAAVLIVRDDNTSIKSFDDLKGKKSA-NTLTSNFGKLAQSHGA-----EVVAVQGF 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWY 238
            E      + R +A   D  +    K         +   D     S     I +G+ E  
Sbjct: 179 NEAIDLLTSGRVEATVNDNLSFLDFKKQKPNAKVKIAATDKTAEFSNSGVLIRKGNPELQ 238

Query: 239 NIVSWTHYAMVTAE 252
             ++    A + A+
Sbjct: 239 AAINKAL-ADIKAD 251


>gi|241890064|ref|ZP_04777362.1| amino acid ABC transporter, amino acid-binding protein [Gemella
           haemolysans ATCC 10379]
 gi|241863686|gb|EER68070.1| amino acid ABC transporter, amino acid-binding protein [Gemella
           haemolysans ATCC 10379]
          Length = 278

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 14/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K  F   L + +L  T  ++            D +    +  G +   V       +G
Sbjct: 1   MRKLRFFLTLVITVLIITGCASGGKDKPKKDNWNDFQTDKKIVIGFDNTFVPMGFQDKSG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   A+         K+++  +N   +   L++  ID++      T  RE  +
Sbjct: 61  KNVGFDIDLANAVFEKYG---IKVEWQAINWDLKETELKNGNIDLIWNGYSKTAEREAVV 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171
              F      + Q  ++ K KG+ +V+ L    +  Q G++   T  +  +         
Sbjct: 118 Q--FTKQYMVNEQVVVVKKSKGVKNVTDLKDKILGAQNGSSGYDTFNENPEVLKNIVKNN 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   E        R DA   D           ++  +  IL         A    
Sbjct: 176 DATQYESFNEALIDLENDRIDALLIDRVYANYYLKQQNKLEDFDILNAGFDSEAFAVGAR 235

Query: 232 QGDTEWYNIVSWTHYAM 248
           + D      ++   Y M
Sbjct: 236 KADVTLVKKINEAFYEM 252


>gi|227432357|ref|ZP_03914349.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351878|gb|EEJ42112.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 490

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 96/278 (34%), Gaps = 26/278 (9%)

Query: 3   KDFFVSILCLI----ILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VK 51
           K   + I+ +     +L       +A+     L  IKK+G L  G++     F     V 
Sbjct: 6   KKISIVIMTITMLLPLLAVLPTHADAATTDPALTKIKKKGTLVIGLSADYAPFEFHATVY 65

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 GFDV+  + ++  +   P       +       ALQ+ +ID++    + T  RE
Sbjct: 66  GRDQIVGFDVEMAKKIAKDLGVKP---VIKEMGFDGLIGALQTGKIDVIISGVNATPERE 122

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHN 168
               + F        Q  ++ KK        L+   G  I VQ  TT E    +      
Sbjct: 123 KV--VDFSNSYMKPLQTVMVLKKDASKYSGNLNSFSGKKIGVQKQTTQETYAQESM---- 176

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLA 227
                +  ++V ++ A     +      +     A        +  +I P   S    ++
Sbjct: 177 SGSTIVSLQKVPDLVAQLSTGKIAGIVLNEPISKAYTQQ--NKAFKIIYPKPSSGEGAVS 234

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            A+ +        ++ +   ++ + EL   QK  N++ 
Sbjct: 235 IAMPKNSPVLKAKINKSLGNIIKSGELEAYQKRANKLM 272


>gi|223039536|ref|ZP_03609823.1| TcmP [Campylobacter rectus RM3267]
 gi|222879107|gb|EEF14201.1| TcmP [Campylobacter rectus RM3267]
          Length = 273

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 85/264 (32%), Gaps = 23/264 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTN--ASILGDIKK-------RGFLKCGINTGLVGFAEVKA 52
           +K  FV  +  ++L     S+N  AS    +K        +  ++ G +     F  +  
Sbjct: 14  FKKLFVFAVTALMLSGCGQSSNEKASKDAAVKNEAAPVAVQQTIRVGSSADYPPFEYIDE 73

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GF++D   A+   I           ++      AL++ +ID        T  R  
Sbjct: 74  HNKIVGFEIDMIEAVGKKIGVK---FDIQNMSFDGLIPALKTGKIDAALSGMSATEERRK 130

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F    YF    FI  K       + ++  ++ ++  +    TL +          
Sbjct: 131 --SVDFTKPYYFSDNLFIRKKG------ADVNATNMHLKKISAQVGTLQETAAKSICGDL 182

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E V     A +A + D    D    Y     N    E + LPD       A A  +
Sbjct: 183 AVPAENVAAAILALKAGKIDIVLTDSPIGYEYLKQNSDLEEFLKLPD--GTEGFAVAFDK 240

Query: 233 GDT-EWYNIVSWTHYAMVTAEELG 255
           G   E    +      +  + E  
Sbjct: 241 GKHLELIGKIDAAIEELKKSGEFD 264


>gi|254508519|ref|ZP_05120637.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
 gi|219548544|gb|EED25551.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
          Length = 258

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 78/226 (34%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K    ++ GI      F+  +A+G  KGFDVD   AL + +     K + +  +
Sbjct: 18  SGVAQAKDWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVKCKIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K  G+     L 
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFDNLD 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 189 VLNKAGGEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTQKLDAAI 234


>gi|319442374|ref|ZP_07991530.1| putative extracellular solute-binding protein [Corynebacterium
           variabile DSM 44702]
          Length = 369

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 15/230 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +T    + DI  RG L  G++  +          G+  GF+VD    ++  IF DP ++ 
Sbjct: 76  ATPEQRVPDIIDRGRLIVGVSQSMNQLGFRDPVTGEMAGFEVDIAHEIARDIFGDPDRVD 135

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +  +    R  AL+   +DI+ R+   T  R   + + F           ++++  GI+S
Sbjct: 136 FRYIEGDGRDEALRDGDVDIVIRSMTVT--RLRQMNVEFSIPYLTVSPRLLVNRNSGIAS 193

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+  ++C    +T+  +L             ++ E   +   A +  + DA   D +
Sbjct: 194 EEDLADKTVCATTRSTSAQSLTSI-----DHNRLLLTETWPDCLMAMQHGQVDAIYSDSA 248

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAII----QGDTEWYNIVSWTH 245
            L  L   +       ++         A A      +        V+ T 
Sbjct: 249 VLSGLLAQDPN---TELVGMSDHTDHYAVATAPPTIRNTAGLVRQVNTTL 295


>gi|271500849|ref|YP_003333874.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Dickeya dadantii Ech586]
 gi|270344404|gb|ACZ77169.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech586]
          Length = 244

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +                ++   +     F  + A+    GFD
Sbjct: 1   MRKLILAALLASTTFSALATE-------------TIRFAASATYPPFESLDADNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +   +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  IDLANALCKQL---QATCSFTNQAFDSLIPALKFRRYDAIISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     S++ L G  I ++ GTT +  L +           + ++  +
Sbjct: 103 PYYANSAIVIAQKG-KFHSLADLKGKRIGMENGTTHQKFLQEKHPE----VTTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +      N   +     I         L  A+   +    
Sbjct: 158 NALIDLKNGRLDGVFGDTAVVNEWLKNNPDLATVGEKITDPTYFGIGLGIAVRPDNQALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNGALNAI 227


>gi|261819591|ref|YP_003257697.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261603604|gb|ACX86090.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 255

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   L    L  TS   +A  L  IK  G +K G       +     +G   GFD
Sbjct: 1   MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKFGTEGTYAPYTYHDKSGQLVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +      I+            + +K+ D +      T  R   +   F  
Sbjct: 59  VDVGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKER--QVKYDFSK 113

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++      I   S L G     Q+ T+     A  + A       +  +  
Sbjct: 114 PYIDSKAVLVVRGDNTAIKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----EIVPTDGF 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K          I        P A  + +       
Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKDQAPLVE 226

Query: 240 IVSWTH 245
            ++   
Sbjct: 227 ALNKAL 232


>gi|169831296|ref|YP_001717278.1| extracellular solute-binding protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638140|gb|ACA59646.1| extracellular solute-binding protein, family 3 [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 268

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 76/251 (30%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK--GF 59
            K   +  L   +          +      ++  L    +T    F      G+    GF
Sbjct: 6   KKVLALFFLVTFLFVVVGCGGGQTTPAPAPEKQKLTVASDTAYAPFEMQGGPGEPTYIGF 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  RA+   +  +   ++ + +       ALQS  +D        T  R   +  +  
Sbjct: 66  DMDLIRAIGEVLGKE---VEIISMGFDGIIPALQSGSVDCAISAMTITEERAKVVNFS-V 121

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P         +      I     L+G  I VQ GTT  L   +   A         F  +
Sbjct: 122 PYYESGLITAVRADNNDIKGFEDLAGKKIAVQIGTTGALKAQEVPDAK-----ISTFNTI 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +      +    DA   D      L        +  ++ D++S      A+ +G  +  N
Sbjct: 177 DLAFLELKKGAVDAVINDAP--VTLYFIQQGNEDVKVVGDLLSGEFYGIAVPKGKEDLLN 234

Query: 240 IVSWTHYAMVT 250
            ++     +  
Sbjct: 235 QINDALKTLKE 245


>gi|300765934|ref|ZP_07075906.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes FSL N1-017]
 gi|300513320|gb|EFK40395.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes FSL N1-017]
          Length = 178

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 67/165 (40%), Gaps = 8/165 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++++ +++L   + S+  S       IKK   +  G++   V       + +  
Sbjct: 1   MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+ +         ++ P++   +   L++  ID++      T  R+  +   
Sbjct: 61  GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
           F      + Q  +  K   I+  S +   ++  Q G ++   +A 
Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAK 160


>gi|90962592|ref|YP_536508.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           salivarius UCC118]
 gi|301301156|ref|ZP_07207313.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821786|gb|ABE00425.1| Amino acid ABC transporter, substrate binding protein
           [Lactobacillus salivarius UCC118]
 gi|300851285|gb|EFK79012.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 272

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 21/250 (8%)

Query: 6   FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           FV +  L + F  +    AS          ++K++G L  G+      ++    +G   G
Sbjct: 13  FVGVASLGLAFNVARPAQASADKISAATSSELKQKGTLTIGLEGTFAPYSYR-KDGKLTG 71

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+V+  + ++  +       +++P         + + + DI+  N   T  R+   G  F
Sbjct: 72  FEVELGKDIAKQMGLKA---KFVPTKWDGLIEGVNTGKYDIVLNNVTVTKERQAKFG--F 126

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                +     I  K  G++++  + G  I    GT   +       A       +    
Sbjct: 127 STPYIYSHFALISKKGSGLNTLKDIKGVKIASGTGTDNSVV------AKKFGAKVVPSSE 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236
                   R  R       +SA YA K                 + P  ++  + + +T+
Sbjct: 181 FSTSLDMVRQGRVKGTINSMSAWYAYKKDGKNVKGLQAKDVSKDEKPAKISALMAKKNTD 240

Query: 237 WYNIVSWTHY 246
               V+    
Sbjct: 241 LKKDVNKALK 250


>gi|254695720|ref|ZP_05157548.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 3
           str. Tulya]
 gi|261216129|ref|ZP_05930410.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|260917736|gb|EEX84597.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
          Length = 257

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLSVKPG---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGHLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|320325715|gb|EFW81776.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 273

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MKYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|104773641|ref|YP_618621.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422722|emb|CAI97349.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|325125283|gb|ADY84613.1| Glutamine ABC transporter solute-binding component [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 279

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 79/236 (33%), Gaps = 16/236 (6%)

Query: 18  TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
           ++ +  +     +   +K    +  G+   +  F          +GF++D  R L+  I 
Sbjct: 24  SACAVESDNSVRVYNHVKSSKTITWGVKFDMALFGIKSVKTNKLEGFEIDLARLLTKEIL 83

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K +++ + A+ +   L++  +D +      T  R+    + F    +  G   +  
Sbjct: 84  GKDGKAKFIEVTAQTKIPQLKNNNLDAVLATMTITNERKK--SVDFSTPYFKAGTSLMTK 141

Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
               I S+  L+  G  + V  GTT    +A                       A  A +
Sbjct: 142 TSSPIKSIKDLNHKGRVVIVAKGTTAADDIARLAPKA----TIRQHNDYGACTNALLAGQ 197

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            DA   D   L  +   +       ++   ++  P   A+ +G T+    ++    
Sbjct: 198 GDAVATDNGILAGIAKQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250


>gi|296113902|ref|YP_003627840.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis RH4]
 gi|295921596|gb|ADG61947.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis RH4]
 gi|326561452|gb|EGE11802.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 46P47B1]
 gi|326562223|gb|EGE12551.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 7169]
 gi|326565595|gb|EGE15758.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 12P80B1]
 gi|326567177|gb|EGE17299.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC1]
 gi|326568459|gb|EGE18539.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC7]
 gi|326572013|gb|EGE22015.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC8]
 gi|326573960|gb|EGE23910.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis O35E]
 gi|326574951|gb|EGE24881.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 101P30B1]
          Length = 262

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 10/238 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDWK 57
           M K F        +          S       +     +          F +  A+G   
Sbjct: 1   MIKPFATLATVACVTLAGCTKEETSTQTTAPAQPSQKSIVIATEAAYPPFNDTDASGQII 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL + +    +  Q +  +      +L + + D +      T  R+    + 
Sbjct: 61  GFDVDVMNALCAEM---HAHCQIIAQDWDGLIPSLLAGKYDAIIAGMSITPERQA--QVD 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    + +   ++  K  G    + ++  ++  Q GTT    + + +          + +
Sbjct: 116 FSDSYFSNTIVWL-AKSDGSFDPNNITNQTLASQRGTTGAAYITEKYD-GKDGNRVQLHD 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                    +A R  A   +  +              +I  +I +   L  A+ +GD+
Sbjct: 174 TYTNAYLDTKAGRNHAVMAEKVSAIDWLKQEGNGEFGLIGEEIDNNDHLGIAVRKGDS 231


>gi|330833057|ref|YP_004401882.1| amino acid ABC transporter amino acid-binding protein
           [Streptococcus suis ST3]
 gi|329307280|gb|AEB81696.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus suis ST3]
          Length = 280

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K    ++  +  L   +      +T +      +    +  G +   V     + +G +
Sbjct: 6   KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 65

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D   A+          +++ P++   +   L +  ID++      T  R+    +
Sbjct: 66  TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173
            F      + Q  +  K   IS VS +    +  QAG++            K        
Sbjct: 121 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 180

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +    E     +  R D    D              +++ I+         A    + 
Sbjct: 181 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 240

Query: 234 DTEWYNIVSWT 244
           DT     ++  
Sbjct: 241 DTTLVENINKA 251


>gi|315657916|ref|ZP_07910790.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
 gi|315496952|gb|EFU85273.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
          Length = 497

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 1   MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50
           M K   + ++  I+   T       + +        IK+ G LK G++           V
Sbjct: 13  MKKLIQLLMVVAIVCGLTIANITPIAHAEQDKNWEKIKESGELKVGLSADYAPMEFEHNV 72

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               ++ G D++  + ++     +  K++ + +       AL++ +IDI+      T  R
Sbjct: 73  NGKNEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTSTPER 129

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           +    + F     +     ++ K       S+  L+   I VQ  T  E       +   
Sbjct: 130 KK--EVDFSDPYMYSNNTVLVKKSDAKKYHSLKDLANKKIAVQKSTEQEKIAQTEIE--- 184

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                    R+ +   + ++H+ DA   +     A    N 
Sbjct: 185 -NASITSLTRLPDAILSLKSHKVDAVVIEKPVAEAYLKQNK 224


>gi|289550425|ref|YP_003471329.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus lugdunensis HKU09-01]
 gi|289179957|gb|ADC87202.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus lugdunensis HKU09-01]
          Length = 485

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 1   MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50
           M K   + ++  I+   T       + +        IK+ G LK G++           V
Sbjct: 1   MKKLIQLLMVVAIVCGLTIANITPIAHAEQDKNWEKIKESGELKVGLSADYAPMEFEHNV 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               ++ G D++  + ++     +  K++ + +       AL++ +IDI+      T  R
Sbjct: 61  NGKNEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTSTPER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           +    + F     +     ++ K       S+  L+   I VQ  T  E       +   
Sbjct: 118 KK--EVDFSDPYMYSNNTVLVKKSDAKKYHSLKDLANKKIAVQKSTEQEKIAQTEIE--- 172

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                    R+ +   + ++H+ DA   +     A    N 
Sbjct: 173 -NASITSLTRLPDAILSLKSHKVDAVVIEKPVAEAYLKQNK 212


>gi|254711106|ref|ZP_05172917.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis B2/94]
 gi|256029487|ref|ZP_05443101.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis M292/94/1]
 gi|261318696|ref|ZP_05957893.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|265986495|ref|ZP_06099052.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|261297919|gb|EEY01416.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|264658692|gb|EEZ28953.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
          Length = 253

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|157369722|ref|YP_001477711.1| glutamine ABC transporter periplasmic protein [Serratia
           proteamaculans 568]
 gi|157321486|gb|ABV40583.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Serratia proteamaculans 568]
          Length = 247

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 79/247 (31%), Gaps = 22/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSIFKVSLAALSLAFAVSSHAA----------DKLVVATDTAFVPFEFKQGD-KYVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +  D       P++      ALQ+K ID+       T  R+    + F  
Sbjct: 50  IDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITEERKK--AIEFSD 104

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I  +  L+G  + V++GT +      + K          F  +
Sbjct: 105 GYYKSGLLVMVNANDNNIKGIDDLNGKVVAVKSGTGSVDYAKQHIKTK----DLRQFPNI 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +    +      +   + + +       A  +G  E   
Sbjct: 161 DNAYMELGTKRADAVLHDTPNIL-YFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRV 219

Query: 240 IVSWTHY 246
            V+    
Sbjct: 220 KVNGALK 226


>gi|227502018|ref|ZP_03932067.1| amino acid ABC superfamily ATP binding cassette transporter
           glutamin-binding protein [Corynebacterium accolens ATCC
           49725]
 gi|227077302|gb|EEI15265.1| amino acid ABC superfamily ATP binding cassette transporter
           glutamin-binding protein [Corynebacterium accolens ATCC
           49725]
          Length = 335

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 84/223 (37%), Gaps = 15/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI KRG L  G++      +   A +GD +GF+VD    ++  IF DP+K+ +  + + +
Sbjct: 85  DILKRGRLIVGVDRSNNLLSYRDAASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESSD 144

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL +  +DI+ R    +  RE  +   F           ++    G++S+    G  
Sbjct: 145 RTAALDNGTVDIIVRTMTISPEREKEVA--FSIPYMTTQTRMLVLTSSGMNSIDDADGKR 202

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C   G+T      D  +    +   ++     +   A + ++ D    D + L  +   
Sbjct: 203 LCGVRGSTAL----DTIRERAPQSDILITRSWGDCLMALQLNQADGVVVDDALLSGMAAQ 258

Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245
           +       I+ + +       A                V+ T 
Sbjct: 259 DS---YTSIVGEPLKTENYGVAARLPNKDHDTRPLLRQVNSTL 298


>gi|84496801|ref|ZP_00995655.1| glutamate-binding protein of ABC transporter system [Janibacter sp.
           HTCC2649]
 gi|84383569|gb|EAP99450.1| glutamate-binding protein of ABC transporter system [Janibacter sp.
           HTCC2649]
          Length = 280

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 10/242 (4%)

Query: 17  FTSFSTNASILGD--IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
            T+   +A           G +K GI     G      +  + G DVD  + ++  +   
Sbjct: 19  LTACGDSADDGDTGSTSSAGKIKIGIKFDQPGLGLKSGS-SYSGLDVDVAKYVAKELGHA 77

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I+++   + +R   + + Q+ ++      T  R+ +  ++F    +  GQ  ++   
Sbjct: 78  EGDIEFVQAPSAQRETLISTGQVQMIFATYSITDKRKAT--VSFAGPYFIAGQDLLVRAD 135

Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+    L+G  +C   G+T+   + D F           F    E  AA  +   DA
Sbjct: 136 DTSITGPETLTGKKLCSVTGSTSAQNVKDKFP----GVQLQQFGTYSECVAALASKGIDA 191

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            T D + L      +    +  ++    S+      I +GDT     ++     M+ + +
Sbjct: 192 LTTDNTILAGYAAQDQYKGKLKVVGKTFSEERYGVGIKKGDTALCGKINTALTKMIDSGD 251

Query: 254 LG 255
             
Sbjct: 252 WQ 253


>gi|325833848|ref|ZP_08166198.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella
           sp. HGA1]
 gi|325485206|gb|EGC87678.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella
           sp. HGA1]
          Length = 276

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 77/243 (31%), Gaps = 14/243 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
           ++L   S   +A         G   L  G + G   +  V  +G + GFD++  +A+   
Sbjct: 20  VMLAGCSGGGDAQSADSAATDGSFTLAVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEK 79

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
              +   ++  P++   +   + S  I+ +                 F     ++ Q  +
Sbjct: 80  NGWE---LKLEPIDWDAKDALIGSGTINCIWNGFTM---ENRENDYTFSEPYMYNEQVVV 133

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAYR 187
           + K      +  L+G ++  Q  +     L D        +                   
Sbjct: 134 VKKDGDAKKLEDLAGKTVLTQVDSAALHVLEDEKGQKALADTFKELQTIGDYNNAFMQLE 193

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           +   DA   D+S   A      +P  +V L  +      A    +GDTE    V+    A
Sbjct: 194 SGMVDAVACDLSI--ASYQMAAKPDTYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALKA 250

Query: 248 MVT 250
           +  
Sbjct: 251 LDE 253


>gi|298290887|ref|YP_003692826.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296927398|gb|ADH88207.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 261

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 78/243 (32%), Gaps = 20/243 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            +  +    +A      K+   ++ G       F  +  N + KGFD+D  +AL   +  
Sbjct: 16  TMGASLSGASA------KEWKTVRIGTEGAYPPFNYI-ENNELKGFDIDIGKALCEKM-- 66

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
                 ++  +      AL + + D +  +   T  R+    + F    Y     F + K
Sbjct: 67  -KVTCTFVAQDWDGIIPALLAGKYDAIVASMSITEERKK--QINFSKKYYKTPATFAVPK 123

Query: 134 KKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
              I  +S + L G ++  Q  T     L D +          ++ + +E +      R 
Sbjct: 124 DSKITDTSPASLKGKTLGAQGSTIHSNYLEDVYAKAG--AEVKLYGKQDEANLDLANGRL 181

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDI----ISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           DA   D   L     + D         +          +   I + D E   + +     
Sbjct: 182 DAVLADKVVLLEWLNSKDGACCKFTGAEYTDPKYFGEGVGVGIRKDDPELVAMFNKAIDE 241

Query: 248 MVT 250
           +V 
Sbjct: 242 IVA 244


>gi|254720388|ref|ZP_05182199.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. 83/13]
 gi|265985407|ref|ZP_06098142.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306837483|ref|ZP_07470359.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
 gi|264663999|gb|EEZ34260.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306407526|gb|EFM63729.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
          Length = 253

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSIAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|23500375|ref|NP_699815.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|62317516|ref|YP_223369.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269499|ref|YP_418790.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|148558167|ref|YP_001257613.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161620690|ref|YP_001594576.1| extracellular solute-binding protein [Brucella canis ATCC 23365]
 gi|163844780|ref|YP_001622435.1| hypothetical protein BSUIS_B0627 [Brucella suis ATCC 23445]
 gi|189022772|ref|YP_001932513.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus S19]
 gi|254691015|ref|ZP_05154269.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 6 str. 870]
 gi|254698800|ref|ZP_05160628.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732245|ref|ZP_05190823.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 4 str. 292]
 gi|256015407|ref|YP_003105416.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|256111451|ref|ZP_05452471.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella melitensis bv. 3 str. Ether]
 gi|256256201|ref|ZP_05461737.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 9 str. C68]
 gi|260544754|ref|ZP_05820575.1| amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260568087|ref|ZP_05838556.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|260756610|ref|ZP_05868958.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260760040|ref|ZP_05872388.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260763279|ref|ZP_05875611.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260882427|ref|ZP_05894041.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|265992954|ref|ZP_06105511.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|294853579|ref|ZP_06794251.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|297249559|ref|ZP_06933260.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|306840710|ref|ZP_07473459.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
 gi|23463993|gb|AAN33820.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|62197709|gb|AAX76008.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939773|emb|CAJ12778.1| Solute-binding protein/glutamate receptor:Ionotropic glutamate
           receptor:Bacterial extracellular solute-binding protein,
           family 3 [Brucella melitensis biovar Abortus 2308]
 gi|148369452|gb|ABQ62324.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161337501|gb|ABX63805.1| extracellular solute-binding protein family 3 [Brucella canis ATCC
           23365]
 gi|163675503|gb|ABY39613.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|189021346|gb|ACD74067.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus S19]
 gi|255998067|gb|ACU49754.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260098025|gb|EEW81899.1| amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260154752|gb|EEW89833.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|260670358|gb|EEX57298.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260673700|gb|EEX60521.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260676718|gb|EEX63539.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260871955|gb|EEX79024.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|262763824|gb|EEZ09856.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|294819234|gb|EFG36234.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|297173428|gb|EFH32792.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|306289283|gb|EFM60527.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
          Length = 253

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|300215199|gb|ADJ79615.1| Amino acid ABC transporter, substrate binding protein
           [Lactobacillus salivarius CECT 5713]
          Length = 272

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 21/250 (8%)

Query: 6   FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           FV +  L + F  +    AS          ++K++G L  G+      ++    +G   G
Sbjct: 13  FVGVASLGLAFNVARPAQASADKISAATSSELKQKGTLTIGLEGTFAPYSYR-KDGKLTG 71

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+V+  + ++  +       +++P         + + + DI+  N   T  R+   G  F
Sbjct: 72  FEVELGKDIAKQMGLKA---KFVPTKWDGLIEGVNTGKYDIVLNNVTVTKERQAKFG--F 126

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                +     I  K  G++++  + G  I    GT   +       A       +    
Sbjct: 127 STPYIYSHFALISKKGSGLNTLKDIKGVKIASGTGTDNSVV------AKKFGAKVVPSSE 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236
                   R  R       +SA YA K                 + P  ++  + + +T+
Sbjct: 181 FSTSLDMVRQGRVKGTINSMSAWYAYKKDGKNVKGLQAKDVSKDEKPAKISALMAKKNTD 240

Query: 237 WYNIVSWTHY 246
               V+    
Sbjct: 241 LKKDVNKALK 250


>gi|323498051|ref|ZP_08103058.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
 gi|323316899|gb|EGA69903.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
          Length = 256

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 14/224 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +   K+   ++ GI      F+  +A+G  KGFDVD   AL + +     K + +  +  
Sbjct: 18  VAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVKCKIVAQDWD 74

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               +L +++ D +      T  R+    + F          FI  K  G+     L G 
Sbjct: 75  GIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFENLDGQ 131

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL    L
Sbjct: 132 KIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188

Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
                  +  +   ++           A+ + D +    +    
Sbjct: 189 NKAGGEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232


>gi|322832617|ref|YP_004212644.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rahnella sp. Y9602]
 gi|321167818|gb|ADW73517.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rahnella sp. Y9602]
          Length = 259

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 91/254 (35%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L ++  +  ++             ++ G +     F    A+G  +GFD
Sbjct: 1   MKKTLALFSLGLAMIGLSGHASAQQ---------QIRFGTDATFPPFEFKAADGSLQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +    +K  ++         ALQ+++ D +  +   T  R+    + F  
Sbjct: 52  IDLGNAICAQL---KAKCVWVENGFDGLIPALQARKFDAIISSLSITDERKK--AINFSD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +++ L G  + VQ G+  E     ++++       + +   
Sbjct: 107 KLFNTPAYLVASKDSGLKPLAESLRGKRVGVQQGSVFEAYAKKHWQSQG--VELVSYPGA 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           E + A     R DA   D + +    L   +     ++   +    +        I + +
Sbjct: 165 EAVYADLVVGRLDATLDDATVVTTALLDKPQGKNFSLIEPQVKDDAIFGPGTGIGISKQN 224

Query: 235 TEWYNIVSWTHYAM 248
            E    ++    A+
Sbjct: 225 AELLEQLNGAIKAI 238


>gi|227891346|ref|ZP_04009151.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus salivarius ATCC 11741]
 gi|227866924|gb|EEJ74345.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus salivarius ATCC 11741]
          Length = 277

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 21/250 (8%)

Query: 6   FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           FV +  L + F  +    AS          ++K++G L  G+      ++    +G   G
Sbjct: 18  FVGVASLGLAFNVARPAQASADKISAATSSELKQKGTLTIGLEGTFAPYSYR-KDGKLTG 76

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+V+  + ++  +       +++P         + + + DI+  N   T  R+   G  F
Sbjct: 77  FEVELGKDIAKQMGLKA---KFVPTKWDGLIEGVNTGKYDIVLNNVTVTKERQAKFG--F 131

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                +     I  K  G++++  + G  I    GT   +       A       +    
Sbjct: 132 STPYIYSHFALISKKGSGLNTLKDIKGVKIASGTGTDNSVV------AKKFGAKVVPSSE 185

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236
                   R  R       +SA YA K                 + P  ++  + + +T+
Sbjct: 186 FSTSLDMVRQGRVKGTINSMSAWYAYKKDGKNVKGLQAKDVSKDEKPAKISALMAKKNTD 245

Query: 237 WYNIVSWTHY 246
               V+    
Sbjct: 246 LKKDVNKALK 255


>gi|325569897|ref|ZP_08145891.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Enterococcus casseliflavus ATCC 12755]
 gi|325157020|gb|EGC69188.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Enterococcus casseliflavus ATCC 12755]
          Length = 281

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 89/290 (30%), Gaps = 29/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46
           M K F   ++   IL   +                   + L  IK  G L    +     
Sbjct: 1   MKKLFGALVVLTGILVLGACGNGGSSSTGSSSASGSADNQLEAIKAAGVLNVATSADFAP 60

Query: 47  FAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           F     +       G D+D    ++  +  +   +  L L+      ALQ  + DI    
Sbjct: 61  FEFHALIDGKDTIVGADIDMVNEIADRLGVE---VNILDLDFNAVLTALQQGKADIAVSG 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLA 161
              T  R       F    +   Q  +++K       S+  LSG  +  Q G+  E+ + 
Sbjct: 118 ISATDER--KQTFDFTDNYFTPEQKVVVNKNNESAFDSIESLSGKKVGAQKGSIQEMIVQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           D           +   +V  +    +    D    + +   +    ND      +  +  
Sbjct: 176 DQLA----DSQLVSIAKVPNLVNELKQGSIDGLVLESAVAESYVAQNDDLVITDVALEAS 231

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTN 270
                A A+ +G TE    ++     ++    +    QKN +  +++   
Sbjct: 232 EGDSYAIALPKGSTELQEELNSILKELIEDGTIDEYVQKNTDLANENAAQ 281


>gi|254705878|ref|ZP_05167706.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis M163/99/10]
 gi|261313307|ref|ZP_05952504.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261302333|gb|EEY05830.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
          Length = 241

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|241758845|ref|ZP_04756958.1| L-cystine-binding protein TcyA [Neisseria flavescens SK114]
 gi|241321053|gb|EER57266.1| L-cystine-binding protein TcyA [Neisseria flavescens SK114]
          Length = 274

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 69/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                 S + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGTIAAVVLAACGGEGSNSASSAPAQSGAASGSLIERINNKGTITVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +     K+++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVADKLG---IKVEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   ++ K   I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVVRKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+         
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKNKPD 214


>gi|170696018|ref|ZP_02887156.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170139098|gb|EDT07288.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 260

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 65/248 (26%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L+     S    A     IK  G  + G       F     +G   GFD
Sbjct: 1   MKSIRSILLVALLQAVAVSPVFAADEFAQIKSSGVFRIGTEGTYAPFTYHDESGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  I   P   Q++          L   + D +      T  R+      F  
Sbjct: 61  VEIGTQIAQRIGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDARKA--KYDFSD 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I +   L G        +           A +     I  +  
Sbjct: 116 PYITSHAALIVRSDNTTIKNFDDLKGKKSANTLTSNFGKI------AASHGAEVIPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEW 237
            E      A R DA   D  +    K         +   D    S    A  I +G  E 
Sbjct: 170 NESIDLLTAGRVDATVNDSLSFLDFKKHKPNAKVKIATLDTSPESSDKSAVLIRKGSPEL 229

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 230 VAAINKAL 237


>gi|62317472|ref|YP_223325.1| FliY, amino acid ABC transporter periplasmic amino acid-binding
           protein [Brucella abortus bv. 1 str. 9-941]
 gi|83269453|ref|YP_418744.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|189022726|ref|YP_001932467.1| Solute-binding protein/glutamate receptor [Brucella abortus S19]
 gi|237817023|ref|ZP_04596015.1| FliY, amino acid ABC transporter, periplasmic amino acid-binding
           protein [Brucella abortus str. 2308 A]
 gi|254690969|ref|ZP_05154223.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 6
           str. 870]
 gi|254698753|ref|ZP_05160581.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254732197|ref|ZP_05190775.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 4
           str. 292]
 gi|256256154|ref|ZP_05461690.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 9
           str. C68]
 gi|260544709|ref|ZP_05820530.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC
           8038]
 gi|260756562|ref|ZP_05868910.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260759993|ref|ZP_05872341.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260763233|ref|ZP_05875565.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260882380|ref|ZP_05893994.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 9 str. C68]
 gi|297249513|ref|ZP_06933214.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|62197665|gb|AAX75964.1| FliY, amino acid ABC transporter, periplasmic amino acid-binding
           protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939727|emb|CAJ12724.1| Solute-binding protein/glutamate receptor:Bacterial extracellular
           solute-binding protein, family 3 [Brucella melitensis
           biovar Abortus 2308]
 gi|189021300|gb|ACD74021.1| Solute-binding protein/glutamate receptor [Brucella abortus S19]
 gi|237787836|gb|EEP62052.1| FliY, amino acid ABC transporter, periplasmic amino acid-binding
           protein [Brucella abortus str. 2308 A]
 gi|260097980|gb|EEW81854.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC
           8038]
 gi|260670311|gb|EEX57251.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260673654|gb|EEX60475.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260676670|gb|EEX63491.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260871908|gb|EEX78977.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 9 str. C68]
 gi|297173382|gb|EFH32746.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 257

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1   MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P    ++          L + + D +      T  R+      F  
Sbjct: 61  VEIGEAIAGKLSVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I   + L G     Q+ T+    LA    A       +  +  
Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    +    +     ++ +    +     + +GD E   
Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 AINKAL 234


>gi|300721605|ref|YP_003710880.1| putative cysteine ABC transporter periplasmic-binding protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297628097|emb|CBJ88648.1| putative cysteine transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 257

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 72/247 (29%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  +  L FT  +   S L  I+  G  + G       F+   A+G   GFD
Sbjct: 1   MKILLTILLAGISQLSFTHLAYAQSTLDTIQSTGIFRIGTEGAYAPFSYHDASGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +   P    ++          L + + D +      T  RE     +F  
Sbjct: 61  VEVGREIALRMKIKPE---FIEGKWDGLIGGLDAGRSDAVMNQIAITPEREK--RYSFSL 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I       I + S L G         T     A    A + K   +     
Sbjct: 116 PYVISEAVLITRTDNNDIKTFSDLKGKKSA----HTLTNNFAQM--ARHYKAEIMGTNGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R DA   D  +    K         ++  D  +    A  + + DTE   
Sbjct: 170 NQEIELVSTGRADATINDKLSYLDYKKHRPDAPVKIVAADTQAAK-TAVLLRKNDTELKT 228

Query: 240 IVSWTHY 246
            V     
Sbjct: 229 AVDNAIT 235


>gi|116049212|ref|YP_791985.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|115584433|gb|ABJ10448.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 273

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L DI + G L+C +           A  +  GFDVD+C  L+ A+    
Sbjct: 17  CSLAGLVQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       +R  AL S + D++  +T  TL R  ++G+      +   +  +  +  
Sbjct: 77  EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194
           GI+S   L G  +   AGT   L L    KA    K     ++   +   A      DA 
Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +   +   +       +          +A    + +    N ++    
Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243


>gi|257865887|ref|ZP_05645540.1| family 3 extracellular solute-binding protein [Enterococcus
           casseliflavus EC30]
 gi|257799821|gb|EEV28873.1| family 3 extracellular solute-binding protein [Enterococcus
           casseliflavus EC30]
          Length = 281

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 89/290 (30%), Gaps = 29/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46
           M K F   ++   IL   +                   + L  IK  G L    +     
Sbjct: 1   MKKLFGALVVLTGILVLGACGNGGSSSTGSSSASGSADNQLEAIKAAGVLNVATSADFAP 60

Query: 47  FAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           F     +       G D+D    ++  +  +   +  L L+      ALQ  + DI    
Sbjct: 61  FEFHALIDGKDTIVGADIDMVNEIADRLGVE---VNILDLDFNAVLTALQQGKADIAVSG 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLA 161
              T  R       F    +   Q  +++K       S+  LSG  +  Q G+  E+ + 
Sbjct: 118 ISATDER--KQTFDFTDNYFTPEQKLVVNKNNESAFDSIESLSGKKVGAQKGSIQEMIVQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           D           +   +V  +    +    D    + +   +    ND      +  +  
Sbjct: 176 DQLA----DSQLVSIAKVPNLVNELKQGSIDGLVLESAVAESYVAQNDDLVITDVALEAS 231

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTN 270
                A A+ +G TE    ++     ++    +    QKN +  +++   
Sbjct: 232 EGDSYAIALPKGSTELQEELNSILKELIEDGTIDEYVQKNTDLANENAAQ 281


>gi|257461099|ref|ZP_05626197.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441473|gb|EEV16618.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 269

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 13/204 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     IL L++    S +  A  L +IK  G L+ G+      F+++  +G  +GF+
Sbjct: 1   MKK----FILSLLVAALASSALCARSLSEIKSSGVLRIGVYDAQPPFSKI-EDGVHQGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +     K+++  + A +R   LQ  ++D +      T  RE    + F  
Sbjct: 56  VDMANTIAKDMLPSGGKVEFTSVLANQRIKFLQEDKVDAVIATLTVTPEREK--QIDFTT 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +    G +   +  I S+++L   +I V +G T E             Y+    +   
Sbjct: 114 PYFSVNIGILTRVEDKIKSLNELQDKTILVLSGGTAETYFE------KQGYNIARCDNAN 167

Query: 181 EIDAAYRAHRCDAYTGDISALYAL 204
               A +A + D Y  D   + A 
Sbjct: 168 ACYKALKAGQGDGYADDNLVVLAY 191


>gi|156933096|ref|YP_001437012.1| hypothetical protein ESA_00906 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531350|gb|ABU76176.1| hypothetical protein ESA_00906 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 89/279 (31%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    S                ++ G +     F+   A GD+ GFD
Sbjct: 1   MKKKVLAFSLLLGLSTSASVFAALPQ--------TVRIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKRQKEIA--FSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    + ++        + ++  
Sbjct: 108 KLYAADSRLIAAKGATIQPTIESLKGKHVGVLQGSTQEAYANEKWR--GKGVDVVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      ++      +             + + D
Sbjct: 166 DLIYSDLSAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKNYFGDGTGVGLRKED 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E                E+       ++++K   + +V
Sbjct: 226 AELKAAFDKAL------GEIRKDGT-YDKMAKKYFDFNV 257


>gi|237653226|ref|YP_002889540.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T]
 gi|237624473|gb|ACR01163.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T]
          Length = 263

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 89/259 (34%), Gaps = 28/259 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   +L   + +  A      K    ++         F  + A+G  +GFD
Sbjct: 1   MKKY----ALLCAVLALHAGAGFA------KDWNEIRLASEGAYPPFNLIAADGSLQGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  ++         AL S++ D +  +   T  R+    + F  
Sbjct: 51  IDIGNALCEEM---KAKCTWVKQEWDGMIPALVSRKFDAIIASMSITDERKA--KVDFTE 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   +   +  L+G  + VQ GT ++     Y+    M    I + + 
Sbjct: 106 KYYASPLALIAKKGSTLRPDLPSLAGKKVGVQRGTVSDNFATKYWDGKGM--QIIRYAKQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS----------KSPLAPA 229
           +E     RA R DA   D    Y   LT    + + +  + +              +  A
Sbjct: 164 DEAYLDLRAGRLDAAFSDYLEAYGGFLTKPEGAGYDVAGERLFGKDADEKAVIGEGIGIA 223

Query: 230 IIQGDTEWYNIVSWTHYAM 248
           + + D E    ++    A+
Sbjct: 224 VRKRDKELTEKLNQALGAI 242


>gi|238793405|ref|ZP_04637030.1| Glutamine-binding periplasmic protein [Yersinia intermedia ATCC
           29909]
 gi|238727178|gb|EEQ18707.1| Glutamine-binding periplasmic protein [Yersinia intermedia ATCC
           29909]
          Length = 247

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 87/251 (34%), Gaps = 22/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS++ L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSLVKVSLVALTLAFAVSSHAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K    P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  IDLWDAIAKKL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++    + I   + L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYNSGLLVMVKADNQDIKGEADLKGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T     +   + + I       A  QG ++  +
Sbjct: 162 DNAYLELGTGRADAVLHDTPNILYFIKTAGNG-QFKAVGESIKAQQYGVAFPQG-SDLRD 219

Query: 240 IVSWTHYAMVT 250
            V+    ++  
Sbjct: 220 KVNVALKSLKE 230


>gi|116670892|ref|YP_831825.1| extracellular solute-binding protein [Arthrobacter sp. FB24]
 gi|116611001|gb|ABK03725.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 273

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 73/231 (31%), Gaps = 12/231 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDD 74
                    S L D+K  G LK G       F+   + +G+  G+DV+   A++  +   
Sbjct: 31  GSAPTGGADSSLSDVKSAGELKIGTEGTYKPFSFHAEGSGELTGYDVEIITAVAGKLGVK 90

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P    +        F  L++K+ D+++     T  R+      F           +    
Sbjct: 91  P---SFQETQFDAIFAGLEAKRFDVVANQVSITDERKA--KYEFSEPYTVSTGVIVTKAD 145

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            G  S           Q+ T+    LA    A+         E   +     +  R DA 
Sbjct: 146 DGSISSFDSLKGKTTAQSLTSNWYKLAQQSGAN-----VEAVEGWAQAVTLLKQGRVDAT 200

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D    Y       + S+  I  +   KS  A A  +G T     V+   
Sbjct: 201 INDK-LTYLDYQKTAKDSDIKIAAETTDKSLSALAFRKGSTSLTEAVNKAL 250


>gi|320535311|ref|ZP_08035431.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
 gi|320147843|gb|EFW39339.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
          Length = 273

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 92/253 (36%), Gaps = 15/253 (5%)

Query: 1   MYKDFFVSILCLIILFF-----TSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F +  L  +I        +    NA        ++  GF+  G+   L        
Sbjct: 1   MKKIFTIFFLIFLISSCQKNLKSDEEKNAYTDVSFDKVRVNGFITVGVGDPLPPLISYSL 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G+D+D   A +  +     KI+   ++  E+   L S ++D ++     T  RE 
Sbjct: 61  SGYMVGYDIDLLEAAAKKL---HLKIKVKAISWDEKEAILDSGEVDCIASGLSITPDREE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F      D Q  +      I +   L    I +Q G+T    L ++ +    KY 
Sbjct: 118 IYA--FTQPYLKDAQVIVTLDSAAIFTFDDLVDKCIGIQKGSTAAGLLKEHLEEKAGKYS 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +   ++  A    + DA   ++  +Y++ L   RP  + I  + ++    A     
Sbjct: 176 ILELDEFMDLLVALENKKTDAIVVNLLTIYSMILREHRP--YRIFDEPLATDYYAFGFRH 233

Query: 233 GDTEWYNIVSWTH 245
            D +  ++V    
Sbjct: 234 KDIKLRDMVQKAL 246


>gi|307130765|ref|YP_003882781.1| arginine-binding periplasmic protein 2 [Dickeya dadantii 3937]
 gi|306528294|gb|ADM98224.1| Arginine-binding periplasmic protein 2 precursor [Dickeya dadantii
           3937]
          Length = 249

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 76/250 (30%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L        +    A+          ++   +     F  + A     GFD
Sbjct: 1   MKKLVLAALLAGTAFSTMTLRAMAA--------DTIRFAASATYPPFESLDAGNQIVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +   +          AL+ ++ D +    D T  R   +   F  
Sbjct: 53  IDLANALCKQL---QTTCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     S++ L G  I ++ GTT +  L D           + ++  +
Sbjct: 108 PYYANSAIVIAQKG-KFHSLADLKGKRIGMENGTTHQKFLQDKHPE----VKTVPYDSYQ 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +      N   +     +         L  A+   +    
Sbjct: 163 NALIDLKNGRLDGVFGDTAVVNEWLKINPDLATVGEKVTDPAYFGIGLGIAVRPDNQALL 222

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 223 EKLNGALNAI 232


>gi|260461454|ref|ZP_05809701.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259032524|gb|EEW33788.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 257

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 14/253 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I   +     +     + L  IK+ G +K G       F    A+G   GFD
Sbjct: 1   MKWLKSLIIAGTLQALAVASGHAGANLDQIKQAGVIKVGTEGTYAPFTYHDASGALVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  +A+   +      +++L          L   + D +      T  R+      F  
Sbjct: 61  VEIAKAIGDKLGVK---VEFLEGKWDGLIAGLDVNRYDAVINEVGITDARKA--KYDFSD 115

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I + + L G     Q+ T+    LA+   A       +  +  
Sbjct: 116 PYIASKAVLIVRGDNTDIKTFADLKGKKSA-QSLTSNFGKLAETNGA-----ELVGTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++        R DA   D  +    K      +  +   +  +       + +GD E   
Sbjct: 170 DQSIQLLLTGRADATINDSLSFLDFKKHKPDANVKIAAQE-ENADYSGVIVRKGDPELVA 228

Query: 240 IVSWTHYAMVTAE 252
            ++    A + A+
Sbjct: 229 AINKAL-ADIKAD 240


>gi|116513633|ref|YP_812539.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092948|gb|ABJ58101.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 279

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 79/236 (33%), Gaps = 16/236 (6%)

Query: 18  TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72
           ++ +  +     +   +K    +  G+   +  F          +GF++D  R L+  I 
Sbjct: 24  SACAVESDNSVRVYNHVKSSKTITWGVKFDMALFGIKSVKTNKLEGFEIDLARLLTKEIL 83

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K +++ + A+ +   L++  +D +      T  R+    + F    +  G   +  
Sbjct: 84  GKDGKAKFIEVTAQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141

Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
               I S+  L+  G  + V  GTT    +A                       A  A +
Sbjct: 142 TSSPIKSIKDLNHKGRVVIVAKGTTAADDIARLAPKA----TIRQHNDYGACTNALLAGQ 197

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            DA   D   L  +   +       ++   ++  P   A+ +G T+    ++    
Sbjct: 198 GDAVATDNGILAGIAKQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250


>gi|256784799|ref|ZP_05523230.1| glutamate binding protein [Streptomyces lividans TK24]
 gi|289768687|ref|ZP_06528065.1| glutamate binding protein [Streptomyces lividans TK24]
 gi|289698886|gb|EFD66315.1| glutamate binding protein [Streptomyces lividans TK24]
          Length = 278

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 73/235 (31%), Gaps = 14/235 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  GI     G  +   +G + GFDVD    ++  +     +I++    + +R   LQ
Sbjct: 38  KKITIGIKFDQPGLGQKTPDG-YAGFDVDVATYVAKKLGYTEDQIEWKESKSADRETMLQ 96

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQA 152
              +D ++     T  R  S  + F            I      I S   L+ A +C   
Sbjct: 97  RGDVDFIAATYSITPER--SEKVDFAGPYLLAHQDVLIRADDDKIKSPEDLNDAKLCSVT 154

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T+   + D       K     +          +    DA T D S L      +    
Sbjct: 155 GSTSAQNVKDKLA---PKAQLQKYPTYSACLNGLQTGAIDALTTDDSILAGYAAQSQFKG 211

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNI 261
           +  +    ++       + +G ++    ++          A   A E      N 
Sbjct: 212 KFKLGGFKMTNENYGIGVKKG-SDLKAKINDALEAMATDGAWDKAVEDNFGPANY 265


>gi|224824430|ref|ZP_03697537.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224602923|gb|EEG09099.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 255

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L + ++   + +              ++ GI+     FA+  A+G  +GFD
Sbjct: 1   MRKTALSLLLAVSMVPLMAQAE------------TIRFGIDGNYPPFAKQAADGHLEGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   +L  A+    +  + +P        AL + + D +  +   T  R+    + F  
Sbjct: 49  VDIALSLCEAM---KATCEIVPQEWDGLIPALNAGKFDAILSSMQITDERKR--AVDFTN 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +        +    SG  I V   +T E    D++         + + +V 
Sbjct: 104 RYYQTPSRMVTKSGVVKVTKDDFSGKRIGVLRASTEERYAKDHWGKKG--VQIVNYGKVT 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           E     +  R D    D     +  L       +      IS +         A+ +G+ 
Sbjct: 162 EAFLDLKTERLDGVFVDQVVADSEFLKRGGTPAYAFAGPGISDTRYFGYGAGIAVKKGNN 221

Query: 236 EWYNIVSWTH 245
                ++   
Sbjct: 222 ALRERLNKAI 231


>gi|170781632|ref|YP_001709964.1| putative glutamate/aspartate-binding transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169156200|emb|CAQ01342.1| putative glutamate/aspartate-binding transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 330

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 9/256 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             + +  +   G +K G       F     +G   GFDV     ++S +      I +  
Sbjct: 82  EGTTMARLAAAGEMKVGTKYDQPLFGLAGLDGKPAGFDVAIAALIASKMGIPFDGITFTE 141

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141
             +  R   +Q+  +D +         R+  +G  F    Y  GQ  ++      I++  
Sbjct: 142 TVSANREPFIQNGSVDAVVATYTINDKRKEVVG--FAGPYYVAGQALMVLADDTTINTPE 199

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G  +C  AG+T    +   F A       +  +   +     R  +  A T D   L
Sbjct: 200 DVRGKQVCSVAGSTPAANIEATFGA-----VVVPTDVYSKCLDPLRNGQVSAVTTDNVIL 254

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-AMVTAEELGITQKN 260
                 N+   + V   +  ++ P    I +GD  +   ++ T   A        + +  
Sbjct: 255 SGFIDQNEGEFKLVGGGETFTQEPYGIGIAKGDEAFRTFINDTLQEAYDDGTWARLFEAT 314

Query: 261 INQVSKDTTNPDVQRF 276
              V      P + R+
Sbjct: 315 AGTVIDTPEPPAIDRY 330


>gi|312962621|ref|ZP_07777111.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas
           fluorescens WH6]
 gi|311283201|gb|EFQ61792.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas
           fluorescens WH6]
          Length = 261

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 85/266 (31%), Gaps = 25/266 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59
           M K   +  L L +L              +   G  LK GI      FA    +G   GF
Sbjct: 1   MKKLVLLGALALSVLSM-----------QVFAEGKPLKIGIEAAYPPFASKAPDGSIVGF 49

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F 
Sbjct: 50  DYDIGNALCKQM---DVKCTWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFT 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      +M +   +S     L G  I VQ G+  +    +           + +  
Sbjct: 105 NRYYLSPARLVMKEGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKG--ATVVPYST 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
             EI     A R D    D + L    L  D    +  +    + +         A+ +G
Sbjct: 163 QNEIYLDVEAGRLDGTVADATLLQDGFLKTDAGKGYAFVGPSFTDAKYFGDGIGIAVRKG 222

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D E  + ++    A+    E    Q 
Sbjct: 223 DKENLDRINAAIAAIRANGEYKKIQD 248


>gi|166364039|ref|YP_001656312.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
 gi|166086412|dbj|BAG01120.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
          Length = 260

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 78/228 (34%), Gaps = 12/228 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
             + ++ L  I +RG L   +   L   A + + G+ +G ++D  + L+  I    + I 
Sbjct: 16  APSFSADLDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLAEEILGSDTAII 75

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P++ +ER   +   ++D        T  R+    + F P  Y D  GF+  K      
Sbjct: 76  LKPVSNQERLQVVIDDRVDFAIARVAITPARQRL--VDFSPFYYLDSSGFVT-KNLLFQR 132

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  L+ + I V  G+TT   +  +                +E          DA+  D S
Sbjct: 133 LEDLANSRIAVLNGSTTIALVRSHLPKA----TLRGVASYQEALNLLETGEIDAFAADNS 188

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTH 245
            L            +  LP  +    L   + +          V+   
Sbjct: 189 LLTGWVQQFPN---YRQLPIQLGAIALGVVLPKGLQYQSLRERVNQAI 233


>gi|89094513|ref|ZP_01167452.1| probable periplasmic binding protein [Oceanospirillum sp. MED92]
 gi|89081249|gb|EAR60482.1| probable periplasmic binding protein [Oceanospirillum sp. MED92]
          Length = 249

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 9/215 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + A+G+  GFDVD  +AL   +  D    + +  +       L++
Sbjct: 26  KIRIATEGAYAPFNMINADGELAGFDVDIAKALCEEMKAD---CKIVAQDWDGIIPGLKA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D +  +   T  R     ++F    Y +   F+  K+        + G  I  Q  T
Sbjct: 83  RKYDAIIASLSITPERSRV--VSFTDHYYSNSLTFVTGKETS-FDPKMVEGKVIGAQRAT 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L D       K    +++  +       + R DA   D    Y    + +  +  
Sbjct: 140 IAGQYLEDNL---GDKATVKLYDTQDNAYIDLASGRLDAILSDKLPAYDWLQSKEGQAFE 196

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                I     +A A+ + D+E     +    A++
Sbjct: 197 FRGEKIDIDDKIAIAVRKPDSELKEKFNKALKAII 231


>gi|330980617|gb|EGH78720.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 254

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------KMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R     + F   
Sbjct: 52  EIGQALCAKMKVECEAVT---SDWDGIIPALMASKFDFLISSLSITEER--QQVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D  +       P +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSIEKAKESLAGKSVGAQRSTLAATWLEDKLE----IMDPKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNVALKEIIA 237


>gi|154175116|ref|YP_001407876.1| TcmP [Campylobacter curvus 525.92]
 gi|112803448|gb|EAU00792.1| TcmP [Campylobacter curvus 525.92]
          Length = 255

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 73/225 (32%), Gaps = 20/225 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K F      +  LFF     +A    + K           K G +     F  +    
Sbjct: 1   MKKLF---AFLVAALFFAGCGDSADKSSNAKASAPSSSEQVFKVGASADYPPFEFIDDKN 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   A+ + I       +   ++      AL++ +ID +      T   +   
Sbjct: 58  KITGFDIDLLEAIGNKIGVK---FEVQNISFDGLIPALKTGKIDAIMSAMSATE--DRRK 112

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F    Y     FI  K   ++  S +    I VQ GT  E+       A       +
Sbjct: 113 SVDFTKPYYSTENLFIRKKGSDVND-SNIGSKQIGVQLGTVQEIAARAITGAK-----VV 166

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
             E +     A +A + D    D S  Y     N    E + LPD
Sbjct: 167 PAEAIGSSILALKAGKIDIVLVDSSIGYGYLKQNPDLEEFLKLPD 211


>gi|291557062|emb|CBL34179.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a]
          Length = 294

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 111/304 (36%), Gaps = 35/304 (11%)

Query: 1   MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40
           M K  F  ++ L +        FT+  TNA+               L +IK  G +  G+
Sbjct: 1   MKKLNFKKLIALGLTAAAAVASFTACGTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
            +    F  V  NG+++G+D+ F   L   +  +   I Y+   A  R   L++ ++DI+
Sbjct: 61  FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELT 159
             N   T  R     + F         G +      I+S+ +  +   + V +GTT EL 
Sbjct: 118 LANFTVTEERAE--KVDFALPYMNVALGVVSPDSNVITSLDNWKAEDRMIVISGTTAELY 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L      +        ++      +A       A+  D + + A           V +  
Sbjct: 176 LT----KNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQ--NKGYTVGIDS 229

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
           + S+  +APA+ +G+    N ++     +    +      + +    DT   D +  L +
Sbjct: 230 LGSQDTIAPAVTKGNETLLNWINDEIKTL---GKENFFHADYDATLTDTYGADYKETLVV 286

Query: 280 DKSS 283
           +   
Sbjct: 287 EGGE 290


>gi|119873347|ref|YP_931354.1| extracellular solute-binding protein [Pyrobaculum islandicum DSM
           4184]
 gi|119674755|gb|ABL89011.1| extracellular solute-binding protein, family 3 [Pyrobaculum
           islandicum DSM 4184]
          Length = 292

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 81/236 (34%), Gaps = 9/236 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     +  IKKRG L  G +     +  V  +    G+D+D  R ++ A+     +++ 
Sbjct: 52  AACPVSVDVIKKRGKLIVGTDATWPPWEWVMGD-KIVGWDIDIAREIAKALG---VQLEI 107

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
             +       A++   +D+      WT  RE    L F    Y +    +    +  I+ 
Sbjct: 108 RDMRFAGLLEAVRKGDVDLAISAITWTSEREKV--LEFSMPYYLESIVVVTKASRTDINK 165

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V  L G ++ VQ GTT E   A   +           +    +    +    DA   D S
Sbjct: 166 VEDLYGKTVGVQIGTTHEEWAATNLEKPGKATVRRYDKVYPYMVEVLKRGDVDAIILDRS 225

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              AL            LP       ++ A+ +   +   +V      ++   +L 
Sbjct: 226 IATALVRKFPDLKIAFELPGSAG--YISVAMPKCAQDLKLVVDQVIENLMQTGKLD 279


>gi|145224550|ref|YP_001135228.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK]
 gi|315444881|ref|YP_004077760.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|145217036|gb|ABP46440.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
 gi|315263184|gb|ADT99925.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 279

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 81/244 (33%), Gaps = 16/244 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G      G  +   +G   GFDVD    ++  +   P KI++    + +R   +Q+
Sbjct: 43  TIVIGTKFDQPGLGQKNPDGTMSGFDVDVATYVAGELGYAPDKIEWKESPSAQRETLIQN 102

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI-CVQA 152
            Q+  ++     T  R+    +AF       GQ  ++      I+  + L    I C  +
Sbjct: 103 GQVTFIAATYSITDSRKE--KVAFAGPYLITGQSLLVRNDNNDITGAASLENNKILCSVS 160

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T    + D +           ++       A +    DA T D   L      +  P 
Sbjct: 161 GSTPAQKIKDEY----QGVQLQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQS--PG 214

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNINQVSK 266
              I+ +  S+      + + D E    ++          A   A +  +    I   + 
Sbjct: 215 TFKIVGEPFSEERYGIGLKKDDAELRTKINDALKKMEDSGAWKEAFDKNLGPAGITAPAP 274

Query: 267 DTTN 270
              +
Sbjct: 275 PPLD 278


>gi|329766948|ref|ZP_08258476.1| hypothetical protein HMPREF0428_00173 [Gemella haemolysans M341]
 gi|328837673|gb|EGF87298.1| hypothetical protein HMPREF0428_00173 [Gemella haemolysans M341]
          Length = 277

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 93/284 (32%), Gaps = 16/284 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +   +  L + +L  +  ++            D +K   +  G +   V       +G
Sbjct: 1   MKRFKLLITLLISVLIISGCASGGKDKPKKDNWEDFQKDKKVVIGFDNTFVPMGFQDKSG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   ++         K+++  +N   +   L++  ID++      T  RE  +
Sbjct: 61  KNVGFDIDLANSVFEKYG---IKVEWQAINWDLKETELKNGNIDLIWNGYSKTKERESVV 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171
              F      + Q  ++ K K I ++S+L    +  Q G++   T  +  +         
Sbjct: 118 R--FTKQYMINEQVVVVKKSKKIKTISELKDRVLGAQNGSSGYDTFNEKPEVLKNIVKNN 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +E   E        R D    D           ++  +  IL         A    
Sbjct: 176 DATQYESFNEALIDLENDRIDVLLIDKVYANYYLKQQNKLRDFDILNAGFDSEAFAVGAR 235

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
           + D    N V+     +   EE    + +     +D    ++++
Sbjct: 236 KADVTLINKVNEAFNKLY--EEGKFQEISNKWFGEDVATDEIKK 277


>gi|188533489|ref|YP_001907286.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand
           binding protein [Erwinia tasmaniensis Et1/99]
 gi|188028531|emb|CAO96393.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand
           binding protein [Erwinia tasmaniensis Et1/99]
          Length = 264

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 88/252 (34%), Gaps = 22/252 (8%)

Query: 1   MYKDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K+   +   +  L ++   S +  A     I++   ++  ++     F      G+  
Sbjct: 1   MKKNTLATFCKLAALALMAGWSLAAQA----KIEQ---VRFAVDPTYPPFESKTPKGELI 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   AL + +    +K  ++         AL++++ D +  +   T  R   +   
Sbjct: 54  GFDIDLGNALCTQM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEERLKQINFT 110

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             P+     Q         + + + L G ++ VQ GT  E      ++ H    + + + 
Sbjct: 111 -VPLYDTHTQLIAHKGSGLLPTAASLKGKNVGVQQGTVQERYALAKWQPHG--VNVVAYG 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQ 232
               ++    + R D    D +      L          L   I + P+     A  + +
Sbjct: 168 DQALVENDLVSGRLDVVFTDAAQAAIGFLKRPEGQGF-ELAGPIVEDPIIGPGTAIGLRK 226

Query: 233 GDTEWYNIVSWT 244
           GD E  + +   
Sbjct: 227 GDDELKSALDNA 238


>gi|134278785|ref|ZP_01765499.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia pseudomallei 305]
 gi|134250569|gb|EBA50649.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia pseudomallei 305]
          Length = 273

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 78/239 (32%), Gaps = 11/239 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + +  +  L   +   +A  L  I K G ++ G+      F  +  +   +G+D+D    
Sbjct: 21  LLLASVAGLSLFAPQAHADALDTIAKSGIVRIGVFEDYPPFGSIGPDMKPQGYDIDVASL 80

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +  A+    +K++ + +    R   L   + D+L          E +  + F        
Sbjct: 81  IGKAL---NAKVELVQVTGDNRMAYLADHKTDML---LSVGETPERAKVIDFSQPYAPYY 134

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K   + +   L+G ++ V  GT  +L+++    A         F+      +A+
Sbjct: 135 LAVFGPKSLAVKNAGDLAGKTVAVARGTLEDLSVSKVAPA---SAVIKRFDDPNGAISAF 191

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + +             +      P+        +  SP    + + +      V+   
Sbjct: 192 LSGQAQLLVVGNDVGATIMAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVNEAI 248


>gi|15807633|ref|NP_294751.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
          Length = 250

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 82/238 (34%), Gaps = 13/238 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +    +    ++KK G L    +     F  + AN    GFD+D   A++  +     K+
Sbjct: 17  TAHAQSGCFANVKKNG-LTVVTSPDYPPFETLDANNKVVGFDMDLLNAVAKHMATHGVKV 75

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137
             +  +      +L +K+ D+++     T  R+    + F           ++ K    I
Sbjct: 76  NLVTQSFDGLVPSLLAKKADLIAAGMTVTEERKK--SVLFSVPYISGPNAIVIRKDTPGI 133

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           S +S LSG ++ VQ GT  E  + D   A         F    +   A +  +  A    
Sbjct: 134 SKLSDLSGKTVAVQLGTAQEKLVGDVKGA-----SVKSFNLYTDAAMAVQTRQAQAMVLH 188

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                +             L  + +    + A+ +   +  N V+     +  + E+ 
Sbjct: 189 KVVANSFVKVYPDLKIAGTLGSLNT----SFAMRKDCGDLQNRVNAALIQVRKSGEMD 242


>gi|33592910|ref|NP_880554.1| putative glutamine-binding periplasmic protein precursor
           [Bordetella pertussis Tohama I]
 gi|33572558|emb|CAE42138.1| putative glutamine-binding periplasmic protein precursor
           [Bordetella pertussis Tohama I]
          Length = 247

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 21/229 (9%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + +A           ++   +        V  +G   GFD++   AL+ A+      
Sbjct: 19  GAGAAHAQE--------TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAQAMGKK--- 66

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I+++ ++ K    ALQ+ + DI       T  R+    + F    Y  G   +  K   +
Sbjct: 67  IEWIDIDFKGLIPALQAGRADIAVSAIYITAERQKV--VDFTDPYYAGGLVVLTKKDGPV 124

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S+  L G  + VQ GT +   L ++F         +  E+ +E+    +  R DA    
Sbjct: 125 KSLKDLEGRKVSVQVGTKSVNYLKEHFPK----VQRVEVEKNQEMFNLVQIGRADAAVTG 180

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             A      +        +L + I+      A+ +  +     ++    
Sbjct: 181 KPAAKLFAQSTQN---LAVLSEQITTEEYGIAVPKSKSGLTRELNEALK 226


>gi|323490819|ref|ZP_08096020.1| ABC transporter (substrate-binding protein) [Planococcus
           donghaensis MPA1U2]
 gi|323395531|gb|EGA88376.1| ABC transporter (substrate-binding protein) [Planococcus
           donghaensis MPA1U2]
          Length = 259

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 13/258 (5%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKG 58
           M K   F+++     L   +  +++       ++   L+ G +     F      GD  G
Sbjct: 1   MIKKLSFITLFASSALVLGACGSSSEEETGSSEKKEVLEMGTSAEFAPFESRNTEGDIVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D    ++  +  +   ++   +       ALQ+ ++D++      T  R+    + F
Sbjct: 61  FDIDLANHIADELGYE---LEITDMKFDGLIGALQNDRVDMVIAGMSATDSRKE--NVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  G+ F+  K  G++S+  L G ++ VQ GT  E           + +     + 
Sbjct: 116 STEYNHSGEMFVTAKDSGLTSLESLEGKTVGVQLGTIQEEGAKSIIADEGINFELKALDD 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEW 237
              +     + R DA   D               +     D  + SP +A A  +G +E 
Sbjct: 176 SGALIQEILSGRIDAAYIDKQVALGYI----EAQDLSAFDDPTTASPGMAVAFPKG-SEL 230

Query: 238 YNIVSWTHYAMVTAEELG 255
              V+     M  + +L 
Sbjct: 231 LEDVNGVLAEMEESGKLD 248


>gi|227877752|ref|ZP_03995786.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus crispatus JV-V01]
 gi|256850081|ref|ZP_05555511.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           crispatus MV-1A-US]
 gi|262047369|ref|ZP_06020326.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           crispatus MV-3A-US]
 gi|227862655|gb|EEJ70140.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus crispatus JV-V01]
 gi|256713053|gb|EEU28044.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           crispatus MV-1A-US]
 gi|260572343|gb|EEX28906.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           crispatus MV-3A-US]
          Length = 290

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 107/297 (36%), Gaps = 41/297 (13%)

Query: 2   YKDF--FVSILCLIILFFTS----------FSTNASIL------GDIKKRGFLKCGINTG 43
            K F   ++IL ++++               + +            IK+RG+L+  +   
Sbjct: 5   KKIFNWIMAILFVVVVLVAGYIGISRPGINGTASGDRWNSENNVSSIKRRGYLRIAVFGD 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L  +  V + G   G+DV   R ++  +   P   +++ +NA  R   L S + DI+  N
Sbjct: 65  LPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVLAN 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+     ++         G I  K   +++  QL G S+ V  GTT E      
Sbjct: 122 FTLTPERKSV--ASWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAENYFT-- 177

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                   + + F+   +   A +  R  A   D S LYA       P   V +  I   
Sbjct: 178 ---KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIGPN 232

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
             ++ A+ +G+      +              IT+ N         N +++ + G +
Sbjct: 233 QYISGAVKKGNKSLQKWMDR-----------EITKLNRESFFTYDYNKELKPYFGKE 278


>gi|218886666|ref|YP_002435987.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218757620|gb|ACL08519.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 249

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 70/206 (33%), Gaps = 9/206 (4%)

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           GI+     FA V  +G   GFDV+    ++  +     K+ + P++       L +K+ID
Sbjct: 30  GIDANYPPFAYVDKSGKPAGFDVESMDWIAKKMG---FKVTHQPMDWDGIIPNLLAKKID 86

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTE 157
           ++      T  R     + F    +   Q FI  K   +++   L G   + VQ GT+  
Sbjct: 87  MVCSGMSITEER--RQKVNFSNPYWNVKQVFIAKKGSTLNTDQILKGKVKLGVQRGTSEA 144

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L    +A    Y    ++            R DA T D                  ++
Sbjct: 145 EALQKDKEAKGYGYDLRFYDSAPLAIEDVLNGRIDAATMDNLPADDAAAKG---KAIQVV 201

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSW 243
                      A  + D E   +++ 
Sbjct: 202 GVYGDSEDFGVATRKEDAELLKMIND 227


>gi|330862548|emb|CBX72703.1| hypothetical protein YEW_JG40510 [Yersinia enterocolitica W22703]
          Length = 193

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 6/166 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  +++   + +  A  L  I++RG L+  +      F  V  +   +G+D
Sbjct: 3   MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +     K+Q +P+ +  R   LQ+ ++D++  +      RE    +AF  
Sbjct: 62  IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
                  G    K+  +    QL+G ++ V  G   ++ L++    
Sbjct: 117 AYAPFFLGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK 162


>gi|310766632|gb|ADP11582.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Erwinia sp. Ejp617]
          Length = 257

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 72/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  ++   F+S +   + L  ++  G LK G       F+    +G   GFD
Sbjct: 1   MKSIATLLLAGMVQFGFSSQAMAETDLAKVQSAGTLKIGTEGTYPPFSYHDTSGKLIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +        ++          L +++ D +      T  R       F  
Sbjct: 61  VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I S   L G        T+    LA  + A       +  +  
Sbjct: 116 PYISSRAVLIVRSNNSAIKSFDDLKGKKSA-HTLTSNFAQLATRYGA-----QVVGTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K       +  I   + +       + + + E   
Sbjct: 170 NQSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKDNPELKA 228

Query: 240 IVSWTH 245
            +    
Sbjct: 229 AIDKAI 234


>gi|148273187|ref|YP_001222748.1| putative glutamate ABC transporter substrate-binding protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147831117|emb|CAN02069.1| putative glutamate ABC transporter, substrate-binding protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 307

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 9/256 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             + +  +   G +K G       F     +G   GFDV     ++S +      I++  
Sbjct: 59  EGTTMARLAAAGEMKVGTKYDQPLFGLAGLDGKPAGFDVAIAALVASKMGIPFDSIKFTE 118

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141
             +  R   +Q+  +D +         R+    + F    Y  GQ  ++      I++  
Sbjct: 119 TVSANREPFIQNGSVDAVVATYTINDKRKEV--VDFAGPYYVAGQALMVLADDTTINTPE 176

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G  +C  AG+T    +   F A       +  +   +     R  +  A T D   L
Sbjct: 177 DVRGKQVCSVAGSTPAANIEATFGA-----VVVPTDVYSKCLDPLRNGQVSAVTTDNVIL 231

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-AMVTAEELGITQKN 260
                 N+   + V   +  ++ P    I + D  +   ++ T   A        + +  
Sbjct: 232 SGFIDQNEGEFKLVGDGETFTQEPYGIGIAKDDEAFRTFINDTLQEAYDDGTWARLFEAT 291

Query: 261 INQVSKDTTNPDVQRF 276
              V      P + R+
Sbjct: 292 AGTVIDTPEPPAIDRY 307


>gi|239944758|ref|ZP_04696695.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239991223|ref|ZP_04711887.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces roseosporus NRRL 11379]
          Length = 307

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 10/232 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
             T    ++ +    K+RG L  G             +  +  GFD++  + +++ +   
Sbjct: 51  AATGVDLDSPVFKKAKERGKLVIGAKADQPYLGFEDQSTKERSGFDIELAKMVAADLGFS 110

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +I++  +++  R  A+   Q+D           R+  +G  F    Y  G   ++ K 
Sbjct: 111 EKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVG--FAGPYYKAGADLLVRKD 168

Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+    + G  +C   G+T    +             +   +  +        + DA
Sbjct: 169 ETAITGKESVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLLTKQVDA 224

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            T D S L           +  ++    +  P    + + D      +S + 
Sbjct: 225 VTTDDSILKGYAAA--NKGKLKVVGKPFTDEPYGIGLNKDDKVLREAISKSL 274


>gi|167748299|ref|ZP_02420426.1| hypothetical protein ANACAC_03043 [Anaerostipes caccae DSM 14662]
 gi|167652291|gb|EDR96420.1| hypothetical protein ANACAC_03043 [Anaerostipes caccae DSM 14662]
          Length = 259

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V++  ++         +      I +   +  G N     F  V  N    GFD
Sbjct: 1   MRKILTVALAGVLAATMLFAGCSKKEEAAIPE--KIIVGTNAEFPPFEYVDDNKKIDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   + ++  +     KI+   +  K    +L+SK I+ ++     T   E    + F  
Sbjct: 59  IAMMKEIAKRM---DVKIEIKNMEFKSLIGSLESKTINAVAAGM--TKDPERMEAVDFSD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIV 175
             Y   Q  I+ K   +  +++L G  + VQ GTT +         +  K          
Sbjct: 114 SYYTSSQVMIVKKDSKLKKMTELKGKKVGVQEGTTGDKLATGENFGEKQKPVVKGVDVRR 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F +        +    DA   D                  I+ D  ++     A+ +G+ 
Sbjct: 174 FPKGVNAVMDLKNGGVDAVVIDEKPAMEF---VKNNKGLKIVRDKAAEEYYCIALPKGNE 230

Query: 236 EWYNIVSWTHYAMVT 250
           +    ++    AM  
Sbjct: 231 KLVKEINKQLKAMKE 245


>gi|171185713|ref|YP_001794632.1| extracellular solute-binding protein [Thermoproteus neutrophilus
           V24Sta]
 gi|170934925|gb|ACB40186.1| extracellular solute-binding protein family 3 [Thermoproteus
           neutrophilus V24Sta]
          Length = 295

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 80/236 (33%), Gaps = 9/236 (3%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     +  IKKRG L  G +     +  V  +    G+D+D  R ++ A+     +++ 
Sbjct: 55  AACPVSVDVIKKRGKLIVGTDATWPPWEWVMGD-KIVGWDIDIAREIAKALG---VQLEI 110

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
             +       A++   +D+      WT  RE    L F    Y +    +    +  I+ 
Sbjct: 111 RDMRFAGLLEAVRKGDVDLAISAITWTSEREKV--LEFSMPYYRESIVVVTKASRTDINK 168

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V  L G ++ VQ GTT E   A   +           +    +    +    DA   D S
Sbjct: 169 VEDLYGKTVGVQIGTTHEEWAAANLEKPGKATVRRYDKVYPYMVEVLKRGDVDAIILDRS 228

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              AL            +P       ++ A+ +   +   +V      +    +L 
Sbjct: 229 IATALVKKFPDLKIAFEIPGSAG--YISVAMPKCAQDLKLVVDQVIENLTQTGKLD 282


>gi|50119207|ref|YP_048374.1| putative cystine-binding periplasmic protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49609733|emb|CAG73167.1| putative cystine-binding periplasmic protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 255

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   L    L  TS   +A  L  IK  G +K G       +     +G   GFD
Sbjct: 1   MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKFGTEGTYAPYTYHDKSGQLVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +      I+            + +K+ D +      T  R   +   F  
Sbjct: 59  VDVGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKER--QVKYDFSK 113

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++      I   S L G     Q+ T+     A  + A       +  +  
Sbjct: 114 PYIDSKAVLVVRGDNAAIKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----EIVPTDGF 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K          I        P A  + +       
Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKDQAPLVE 226

Query: 240 IVSWTH 245
            ++   
Sbjct: 227 ALNKAL 232


>gi|298290179|ref|YP_003692118.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296926690|gb|ADH87499.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 270

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 74/226 (32%), Gaps = 6/226 (2%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
              A  L DI   G L+C +           A+ +  GFDVD+C  L+  +      ++ 
Sbjct: 20  PAQADKLDDIIASGTLRCAVVLDFPPMGSRDASNNPIGFDVDYCNDLAKVLGVKAEIVE- 78

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                 +R  AL S ++D+   +T  TL R  + G  F    +      +     GI   
Sbjct: 79  --TPFPDRIPALVSGRVDVGVASTSDTLERAKTAG--FTIPYFAFKMVVLTKDGLGIKDY 134

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G      +GT   L L    KA         ++   ++  A    + +A     + 
Sbjct: 135 DSLKGKKTGSVSGTFEALALEKDVKAWGTG-SFRGYQTQADVFLALAQGQIEATVVTSTV 193

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             A+          +          +A   ++ +    N ++    
Sbjct: 194 AAAIVKEGKYKGLMMGGDAPYDIDYVALIALRNEQGLINYLNLFIN 239


>gi|254695678|ref|ZP_05157506.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 3 str. Tulya]
 gi|261216080|ref|ZP_05930361.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|260917687|gb|EEX84548.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
          Length = 253

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVALPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|77404680|ref|YP_345254.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77390330|gb|ABA81513.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Rhodobacter sphaeroides 2.4.1]
          Length = 280

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 87/248 (35%), Gaps = 12/248 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+K G ++ G+      F     +G  +G +V+  R +    F      +   + ++ 
Sbjct: 35  EAIQKAGKIRIGVKCDSPPFGASGPDGKPRGIEVEMARKIGDYAFGSEEGAELSCVTSEA 94

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  +L + ++D++      T  R     + +  I ++     ++     +  +S L G S
Sbjct: 95  RISSLNAGKLDLIIATLGRTAAR--QEVIDYSNIYFWGTSNVLVPADSPVQKLSDLQGRS 152

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G T    L     A+      +      +   A    R D + GD   +Y L   
Sbjct: 153 VLVVKGATQIKWLE----ANIPDISIVQLNTTADGVQALMQGRADGFVGDGGLIYTLGGN 208

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
             +     ++ + +        + +G+TE    V+     +   +        I Q  ++
Sbjct: 209 YPK---LRVIEEGLDLGVNGVGMRKGETELQTFVNAVLDELRKGDFYETV---IPQFVEE 262

Query: 268 TTNPDVQR 275
               DV +
Sbjct: 263 PAVVDVMK 270


>gi|323702152|ref|ZP_08113819.1| extracellular solute-binding protein family 3 [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532839|gb|EGB22711.1| extracellular solute-binding protein family 3 [Desulfotomaculum
           nigrificans DSM 574]
          Length = 269

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 72/213 (33%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G +     F  V  NG   GFDVD   AL      +   + +  +N      ALQ+
Sbjct: 45  KLVVGSDAAFAPFEFV-ENGKPTGFDVDLITALCEEAGYE---LDFRNMNFDGLIPALQT 100

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAG 153
            QID+          R     + F    Y  G    +  K   I     L G  I VQ+G
Sbjct: 101 GQIDVAVSGMSINEER--KQVVNFTDPYYKSGLIVAVQAKNNDIKGFDDLKGKKIAVQSG 158

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT     A   +    K   + F   +++    +    DA   D   L        + ++
Sbjct: 159 TTG----AKMAEKVTTKDKIVYFSNSDQVLLDLKNGSVDAVINDYPVLKYFMDKVAK-ND 213

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             ++ + ++      A+ +  TE    ++    
Sbjct: 214 VKLVGEKLTSEDYGIAVPKNKTEVLEKLNAALK 246


>gi|300933043|ref|ZP_07148299.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium resistens DSM 45100]
          Length = 293

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 88/290 (30%), Gaps = 23/290 (7%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K      +    + +    + S   S     L +  K G +  G      G       
Sbjct: 1   MRKPSLAMRIVAAVMTLFSVAALSACGSNEARTLLESIKSGHVILGTKYDQPGLGVRTPA 60

Query: 54  GDWKGFDVDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            +++G D D  R     ++        K+ +    + +R   +++ ++D+++        
Sbjct: 61  KEYEGVDTDVSRYVVKYIAEKNGWAMPKMTWRETPSAQRETLIKNGEVDMIAATYSINKG 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHN 168
           R     + F        Q  ++ K   I  +S + +G  +C   G+T    +        
Sbjct: 121 R--YKSVDFGGPYLQTHQAILVRKDDPIQGLSDMGAGTKVCSVTGSTPAQKIKKALPE-- 176

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII----SKS 224
                  F+       A    + DA + D + L             V L        +  
Sbjct: 177 --VQLQEFDTYSACVEALARGKVDALSTDATILAGFAEQYPGTMRVVELKKDDGSYWTNE 234

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273
                + +G  +    ++     M  + E   I +KN+    K    P +
Sbjct: 235 NYGIGLAKGQPDAVKAINDALNEMHDSGEYERIIKKNLGDAIKPGDKPKI 284


>gi|210611518|ref|ZP_03288938.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787]
 gi|319936515|ref|ZP_08010930.1| extracellular solute-binding protein family 3 [Coprobacillus sp.
           29_1]
 gi|210151965|gb|EEA82972.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787]
 gi|319808407|gb|EFW04962.1| extracellular solute-binding protein family 3 [Coprobacillus sp.
           29_1]
          Length = 290

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 12/219 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            + +IKK G +  G+ +    F  V  NG+++G+D+ F   L   +      I Y+   A
Sbjct: 42  TVDEIKKSGTINIGVFSDKAPFGYVDENGEYQGYDIYFAERLGKDLGVK---INYVSTEA 98

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-S 144
             R   LQ+ ++D++  N   T  R     + F         G + HK+  I+ +SQ+ +
Sbjct: 99  ANRIEYLQTGKVDVILANFTVTDERAE--EVDFALPYMNVSLGVVSHKEHVITDLSQVGA 156

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              + V +GTT E  L      +        F+      +A+      A+  D + + A 
Sbjct: 157 DEQVIVISGTTAETYLT----KNYPDIKLQKFDTYAAAKSAFENGTGVAWANDNTEVIAF 212

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               +     + +  + S   +APA+ +G+T   + ++ 
Sbjct: 213 A--KENEGYTIGIDSLGSSDTIAPAVTKGNTSLLDWLNE 249


>gi|254699861|ref|ZP_05161689.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis bv. 5 str. 513]
 gi|261750335|ref|ZP_05994044.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261740088|gb|EEY28014.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
          Length = 253

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M KD   + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKDIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|227824560|ref|ZP_03989392.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21]
 gi|226905059|gb|EEH90977.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21]
          Length = 265

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 77/261 (29%), Gaps = 16/261 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEV-KANGD 55
           M K    + +L  +IL       NA+         ++  L  G       F    +    
Sbjct: 4   MKKSLKMMCLLAALILGVAGCGGNAAKDDKKAAAPQKKELVVGTAPSFAPFEFPSEEADK 63

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD++   A+   +  +   +    +       A+ +  ID++      T  R+    
Sbjct: 64  PTGFDMELIEAIGKKMGYEK--VTIKGMGFDALIPAMNAGNIDVIISGMSITDARKK--Q 119

Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F    Y  G   I+ K    I S   L G  I VQ GTT          A        
Sbjct: 120 VLFTDPYYESGLMVIVKKDNNEIKSFDDLKGKRIGVQLGTTGAQEAEKIEGAK-----VT 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+  +      +    DA   D+  L    L     S    +           A  +  
Sbjct: 175 NFDTSDLACIELKNGNVDAVISDLPVLQ-YFLKQKGSSYAKAVGTPKKGDFYGIAAPKDK 233

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +  + ++     +  + E  
Sbjct: 234 KDLVDGMNKALKELKDSGEYK 254


>gi|152989478|ref|YP_001349970.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           PA7]
 gi|150964636|gb|ABR86661.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa
           PA7]
          Length = 259

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+ +            ++ GI      F+    +G   GFD
Sbjct: 1   MKKLALLGALALSVLSLPTFAADKP----------VRIGIEAAYPPFSLKTPDGQLAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     + +++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  VDIGNALCEEM---KVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKR--SVDFTN 105

Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+M +   ++     L G    V  G+T +   +            + +   
Sbjct: 106 KYYNTPARFVMKEGASLNDPKADLKGRKAGVLRGSTADRYASGELTPAG--VEVVRYNSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E +    A R DA   D   L    L  D    +  +   ++           A+ +GD
Sbjct: 164 QEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLNDVKYFGEGVGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
           +E     +    A+
Sbjct: 224 SELAGKFNAAIDAL 237


>gi|119717234|ref|YP_924199.1| extracellular solute-binding protein [Nocardioides sp. JS614]
 gi|119537895|gb|ABL82512.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nocardioides sp. JS614]
          Length = 294

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 87/229 (37%), Gaps = 10/229 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPS 76
           + S+ A  L  I   G L    +     F          + GFDVD   A++  +  +  
Sbjct: 53  TGSSEAPSLNLISD-GTLTVCSDVPYPPFENFDKTTPTGFAGFDVDIVNAIAEQLDLE-V 110

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           +I+    NA +  LAL S Q D+ +     T  RE  +G  F    Y   Q  ++     
Sbjct: 111 QIKDSDFNALQSGLALNSGQCDMAASAMTITPEREQKIG--FSDGYYDSEQSLLVPSDSS 168

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+ +  L G  + VQ GTT E    +    +      +VF    E+ AA +A + DA   
Sbjct: 169 IAGIGDLDGVKVGVQKGTTGEAYANE----NASGADIVVFPSDGEMYAAIKAGQVDALLQ 224

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D+      +     P E  ++    +      A+ + +T   + V+   
Sbjct: 225 DLPVNLDHQNDPKAPGEFKVVEKYDTGESYGLAMKKDNTGLIDAVNEAL 273


>gi|319405828|emb|CBI79460.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella sp. AR 15-3]
          Length = 250

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++  +I     S   NA           LK         F+ + +N    GFD
Sbjct: 1   MK---LLAVAFIISATLFSQLANAKT---------LKIATEGSYPPFSYIDSNNKLHGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +     +      +     L L +++ D +  +   T  R     + F  
Sbjct: 49  IDITHALCEKM---KIECVITIQDFDGIILGLLAQKYDAIIASLSPTQER--LKKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+ K   I   S     G ++ VQ  TT  +   +++ +     +   +  
Sbjct: 104 AYYSTELAVIVLKDSQIKEISAEAFKGKNLGVQLNTTQAIYAENHYVSKG--VNIKFYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E+     ++R D    D   +        +   H +     ++ P+A AI Q + +  
Sbjct: 162 TKEVIRDLLSNRLDIVILDKLQILDWFKNKGKDCCHFLGSIKGTQLPIAIAIRQNNDDLK 221

Query: 239 NIVSWTHYAM 248
           +  +    A+
Sbjct: 222 SQFNKAIKAI 231


>gi|58698602|ref|ZP_00373499.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630093|ref|YP_002726884.1| amino acid ABC transporter, periplasmic amino acid binding protein
           [Wolbachia sp. wRi]
 gi|58534872|gb|EAL58974.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592074|gb|ACN95093.1| amino acid ABC transporter, periplasmic amino acid binding protein
           [Wolbachia sp. wRi]
          Length = 244

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 72/211 (34%), Gaps = 19/211 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+ + IL             +I     ++  I+     F     NG + GFD
Sbjct: 1   MKKYILNAIIVISILLTGC---KEDKHDNI-----IRFAISADYPPFEYY-ENGKFTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + ++  +  +     +  +     F ALQS  +D        T  RE      F  
Sbjct: 52  IELAQLVAKELGKEA---IFKDMQFSTIFAALQSNSVDAAISTIGSTEEREK--NFDFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y    G + HK K I+ ++ L+   I VQ GT  E+ L ++          I  +   
Sbjct: 107 SYYTGEFGILYHKNKPIAGINNLTHKKIAVQLGTVMEIWLKEHVP---TTAQIIAIDNNN 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +     ++   D    D         +   P
Sbjct: 164 QAVETLKSGHVDGVLIDE--FQGKVFSKKNP 192


>gi|307152145|ref|YP_003887529.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
 gi|306982373|gb|ADN14254.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
          Length = 261

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 16/253 (6%)

Query: 1   MYKD-----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K        ++I  + +  F   ST A+ L +I  RG L  G+             G+
Sbjct: 1   MIKSQKLLNLSLAIALMTLGLFPWASTRAASLEEIIHRGKLIVGVKDNTRPLGFKNEQGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GF++D  + L+  +      +   P+N  ER   +    +DI       T  R     
Sbjct: 61  LQGFEIDVAQRLAQELLGSAEAVILRPVNNLERLQVVIDGTVDITIARVTDTSSRSRV-- 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           +      Y DG G +  K   I +    + + + +   ++T   +             I 
Sbjct: 119 VDLSIYYYLDGTGLVT-KNPLIRNRFDAASSRVALLNNSSTIAVIKSEMP----NAKLIG 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +  EE  +   + + D + GD S L           ++  LP  +S   L   + +G  
Sbjct: 174 VDSYEEALSLLESGQADVFAGDNSILAGWVQEYP---QYRQLPVRLSGEALCVVMPKGL- 229

Query: 236 EWYNIVSWTHYAM 248
           ++ ++ +  + A+
Sbjct: 230 QYKSLHNRVNDAI 242


>gi|326560579|gb|EGE10960.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 103P14B1]
 gi|326576281|gb|EGE26196.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis CO72]
          Length = 262

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 10/237 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDWK 57
           M K F        +          S       +     +          F +  A+G   
Sbjct: 1   MIKPFATLATVACVTLAGCTKEETSTQTTAPAQPSQKSIVIATEAAYPPFNDTDASGQII 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL + +    +  Q +  +      +L + + D +      T  R+    + 
Sbjct: 61  GFDVDVMNALCAEM---HAHCQIIAQDWDGLIPSLLAGKYDAIIAGMSITPERQA--QVD 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    + +   ++  K  G    + ++  ++  Q GTT    + + +          + +
Sbjct: 116 FSDSYFSNTIVWL-AKSDGSFDPNNITNQTLASQRGTTGAAYITEKYD-GKDGNRVQLHD 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                    +A R  A   +  +              +I  +I +   L  A+ +GD
Sbjct: 174 TYTNAYLDTKAGRNHAVMAEKVSAIDWLKQEGNGEFGLIGEEIDNNDHLGIAVRKGD 230


>gi|289672222|ref|ZP_06493112.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae FF5]
 gi|330900966|gb|EGH32385.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 254

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------KMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R     + F   
Sbjct: 52  EIGQALCAKMKVECEAVT---SDWDGIIPALMASKFDFLISSLSITEER--QQVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D          P +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSIEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDPKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNVALKEIIA 237


>gi|70730426|ref|YP_260167.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68344725|gb|AAY92331.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 259

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 21/253 (8%)

Query: 1   MYKDFFVS-ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +    +L +  +   + +         K+   L+ G+N     F    A G  +GF
Sbjct: 1   MTKHWLAVPLLAIACVSMGASA---------KEWKELRFGVNPSYPPFESTTAGGGVQGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD   A+ + +     K  ++  +      AL++ + D +  +   T  R     + F 
Sbjct: 52  GVDLGNAICAEL---KLKCVWVSNDFDGLIPALKAGKFDAIESSMTVTDARRK--QIDFS 106

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      +  K  G+  +   L G ++    GT  E                  ++ 
Sbjct: 107 DRLYAGPTAIVTRKGSGLEPTGESLKGKTLGYMQGTVQETYARAKLGPAG--VKLRAYQN 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDT 235
            +++ A     R DA   D        L + + ++      + D +  S +A  + +   
Sbjct: 165 QDQVYADLVYGRLDASIQDKLQAQMSFLASPQGADFENSVGISDPLVPSEIAIGLRKDQD 224

Query: 236 EWYNIVSWTHYAM 248
           E   +++    A+
Sbjct: 225 ELKAMLNGAIQAL 237


>gi|317491413|ref|ZP_07949849.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920960|gb|EFV42283.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 243

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 86/248 (34%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I +  ++                ++         F  + AN   +GFD
Sbjct: 1   MKKIIIATVLAGISVSASAAE-------------TIRFAAEASYPPFEFMDANNQMQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +   +   +      +L+ K+ID +    D T  R+  +   F  
Sbjct: 48  IDLANAICKQM---KATCTFTNQSFDSLIPSLKFKRIDAVISGMDITPERQKQVA--FTA 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ ++ L G  + +Q G+T +  L +          P+ ++  +
Sbjct: 103 PYYDNSALFIAEKG-KVADIAALKGKRVGMQNGSTHQKYLQEKHPE----ITPVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N   +     +       + L  A+ Q + E  
Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKQNSALTAVGDKVTDPNYFGTGLGIAVRQNNAELL 217

Query: 239 NIVSWTHY 246
           N  +    
Sbjct: 218 NQFNAALN 225


>gi|307729123|ref|YP_003906347.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307583658|gb|ADN57056.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 260

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 64/248 (25%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L+     S    A     IK  G  + G       F     +G   GFD
Sbjct: 1   MKSIRSIVLVALLHAVAASPVFAADEFAQIKSSGVFRIGTEGTYAPFTYHDESGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +   P   Q++          L   + D +      T  R+      F  
Sbjct: 61  VEIGTQIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDARKA--KYDFSD 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I +   L G        +      A            I  +  
Sbjct: 116 PYITSHAALIVRSDNTTIKTFDDLKGKKSANTLTSNFGRIAAA------HGAEVIPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237
            E      A R DA   D  +    K         +   D    S    A  I +G  E 
Sbjct: 170 NESIDLLTAGRVDATVNDSLSFLDFKKHKPNAKVKIAALDTSGESSDKSAVLIRKGSPEL 229

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 230 VAAINKAL 237


>gi|13470758|ref|NP_102327.1| amino acid ABC transporter amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
 gi|14021501|dbj|BAB48113.1| probable amino acid binding protein of ABC transporter
           [Mesorhizobium loti MAFF303099]
          Length = 261

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 16/224 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L+ G       F  + ++G   GFD+D  +AL   +     K  ++  +      A
Sbjct: 24  QEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQM---KVKCTFVAQDWDGIIPA 80

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
           LQ+ + D +  +   T  R+    + F    Y       + K   +   + + L+G +I 
Sbjct: 81  LQAGKFDAIVASMSITPERKE--KVDFTHKYYNTPSALAVPKDSTLKGVTKADLAGKTIG 138

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V   TT     +  +           +    E  A     R DA   DI  L     + D
Sbjct: 139 VATTTTHFNYASKTY----TDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQWLDSPD 194

Query: 210 RPSEHVIL-PDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248
                ++  P         P    A+ +G+T+  N ++    A+
Sbjct: 195 GACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNEAIDAI 238


>gi|319408410|emb|CBI82065.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           schoenbuchensis R1]
          Length = 250

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++I+ ++ +   +   NA           LK         F+ + +N   +GFD
Sbjct: 1   MK---LLAIILMVSVTLFTQLVNAKT---------LKIATEGSYPPFSYIDSNNKLQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  +       L +K+ D +  +   T  R     + F  
Sbjct: 49  IDISYALCEKMNVE---CSIILQDFDGIIPGLLAKKYDAIIASLAPTQER--LQKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+ K   I   S     G ++ VQ+ TT  +   D + +     +  ++  
Sbjct: 104 AYYRTALAVIVPKDSQIKEISAEAFKGKNLGVQSNTTQSMYAEDNYASKG--VNIKLYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E++    +HR D    D   + +      +    ++     ++ P+A  I   + +  
Sbjct: 162 AIEVNRDLLSHRLDVVILDKLQILSWLENEGKECCRLLGSIEETQLPIAIGIRHNNDDLK 221

Query: 239 NIVSWTHY 246
           N  +    
Sbjct: 222 NKFNEAIK 229


>gi|317495049|ref|ZP_07953421.1| extracellular solute-binding protein [Gemella moribillum M424]
 gi|316914821|gb|EFV36295.1| extracellular solute-binding protein [Gemella moribillum M424]
          Length = 192

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M K   +  + +  +  T+ S   +    + +IK++G +  G++     +          
Sbjct: 1   MKKLLLLITVMVAAITLTACSGAKTTKTKMDEIKEKGKIVLGVSPDYPPYEFTTTENGQK 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G D+   + ++  +  +   ++   +       A+ + ++D++    + T  R+   
Sbjct: 61  KVVGADIYLAQEIAKKLGVE---VEIQEMAFDSLIAAVNANKVDMVISGVNPTEERKK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F  I Y     F+++K    I SV+ L G  + VQ G+T E    +  K        
Sbjct: 116 AVDFSDIYYTGKGIFVVNKDSAEIKSVADLKGKKVGVQKGSTYETYAKEQLKI--EDKDL 173

Query: 174 IVFERVEEIDAAYRAHRCD 192
                V  +    +  +  
Sbjct: 174 QSLTDVPSLLQDLKNKKLM 192


>gi|239982245|ref|ZP_04704769.1| secreted protein [Streptomyces albus J1074]
          Length = 316

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 15/250 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+      +    +  G +K G +           +G   G DVD   AL   +  +   
Sbjct: 48  TAAPLADKLPKKYQDSGVVKVGSDIAYPPVEFKDKDGKTVGLDVDLAAALGEQLGVE--- 104

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFDGQ 127
           +++           L+SK+ D+       T  R+             G+ F         
Sbjct: 105 LKFENGTFDTLLGGLRSKRYDVAMSAMTDTKARQEGLDSETGKKVGEGVDFVDYFTAGVS 164

Query: 128 GFIMH-KKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAA 185
            +    K +GI +   L G  I VQ GT +     A+  K    +     F+  ++    
Sbjct: 165 IYTNKGKDQGIKTWQDLCGKKIVVQRGTVSHDLAKAESKKCEKGEIKMETFDNDQQAQTR 224

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R+   DA + D         T+       ++ + +  +P   AI + + E  + +    
Sbjct: 225 LRSGGADAGSSDFPVAAYAVKTSGGGDHFELVGEQVEAAPYGIAISKSNPELRDAIKAAL 284

Query: 246 YAMVTAEELG 255
            A++ + E  
Sbjct: 285 DAIIESGEYD 294


>gi|210629971|ref|ZP_03296194.1| hypothetical protein COLSTE_00078 [Collinsella stercoris DSM 13279]
 gi|210160722|gb|EEA91693.1| hypothetical protein COLSTE_00078 [Collinsella stercoris DSM 13279]
          Length = 275

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 89/239 (37%), Gaps = 16/239 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD-- 73
            ++ +   S L  I+ RG L  G+   + G+         ++G ++D C  ++++IF   
Sbjct: 24  GSTSAAPGSKLAAIQARGQLNAGVKKDVPGYGYYDPAARTYEGMEIDLCYQVAASIFGVS 83

Query: 74  -----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                +   + +  +  K R   + + Q+DI+      T  R       F      D  G
Sbjct: 84  YEEARERELVAFTDVTPKTRGPLIDNDQLDIVCATYTITPER--RESWDFSSAYRTDYVG 141

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAY 186
            ++ K+ G   ++ L G  I V  G TT+  +    K  ++   P  + F     I ++ 
Sbjct: 142 LMVKKRSGFKRIADLDGRIIGVSQGATTQGLIEQMLKDEDIDATPEFLAFSGYPIIKSSL 201

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A   D +  D S L          +  ++ P++           +  ++   +V  T 
Sbjct: 202 DAGNIDCFAMDRSTLAGYM----NETVELLEPEVKFGEQQYGIATKKGSDLSAVVDQTV 256


>gi|241765820|ref|ZP_04763759.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241364268|gb|EER59430.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 253

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 98/274 (35%), Gaps = 23/274 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       ++   +     FS  A  L DIKK G +          F   K      GF+
Sbjct: 1   MK---LFKVIASTLALCAVFSVQARSLDDIKKGGKIIVATEGQFAPFNYFKGT-TLTGFE 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +     KI++  +        L+  + D++  +   T  R     + F  
Sbjct: 57  VEVAELVAKKMG---LKIEWKTIGFDALLTGLKQDRWDLVIASHGVTEERAK--AVTFTE 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++   G ++     I S   L+G  + VQ GT+    +        MK     F    
Sbjct: 112 P-HYCSGGMVISMDPAIRSAKDLAGKIVAVQTGTSYLENVQKVTTIKEMKN----FPTDV 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  +A  +HR DA+  D     A ++    P   + L +++    +A A+ +G+    + 
Sbjct: 167 DARSALTSHRVDAWVTDR--FVAKEVVAKNPKAGLKLGEMVFIERIASAVAKGNQPLAD- 223

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
                 A   A    +   +   VSK   N DV+
Sbjct: 224 ------AWSKALAETMADGSYTAVSKKYFNEDVR 251


>gi|218440339|ref|YP_002378668.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
 gi|218173067|gb|ACK71800.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
          Length = 276

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 88/254 (34%), Gaps = 15/254 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    +  L LI L   S    A   L  I++ G L  G     + F      G+W G
Sbjct: 1   MNKNKITLFFLSLICLTNYSLKVYAETVLEKIQRTGELNAGARIDAIPFGYKTDKGEWTG 60

Query: 59  FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + V+  R +   +    + P K+    +    RF  ++ +Q+DI+   T  T  R     
Sbjct: 61  YSVELLRLIHQDLEKKLNKPIKLNLKEVTIDNRFQTVEKQQVDIVCGATTITQQR--LEK 118

Query: 116 LAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    +  G  F++             L   +I     TTT+  +   +     +   
Sbjct: 119 VDFSIPFFMTGSQFLVKLEDATNFDINGTLKDKAIAYLPNTTTDQIIRQIYPFAKWQ--- 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPD-IISKSPLAPAII 231
                 +E     +A    A   D   L    +   + P +  ++P+  ++    A  + 
Sbjct: 176 -TVTNRDEGVRKLKAGEVTAVVSDGILLVGEIVRQGNNPRDFALMPNVPMTTELYACILP 234

Query: 232 QGDTEWYNIVSWTH 245
           + + +W   V  T 
Sbjct: 235 KNNPQWKEFVDQTI 248


>gi|116254800|ref|YP_770636.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259448|emb|CAK10586.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 275

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 10/239 (4%)

Query: 1   MY-KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M        ++    L   + S   A  L  +K  G LK G  T    F  + A G+  G
Sbjct: 1   MKAHSLLKGLVGAAFLIGAAVSAHAADTLAAVKAAGTLKVGTETAFAPFDYIDA-GEHTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +VD    +   +      I+++ L     F AL++ + D+++     T  R       F
Sbjct: 60  LNVDLFAEIGKELGVK---IEWVALPWDGVFPALEAGKFDVVAGPATITKKR--LERYRF 114

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            P         +       IS    ++G  I V   T     L ++ +    K     + 
Sbjct: 115 TPPIAEATIAILKKAGDTTISKPEDIAGKKIGVGKATAQLDQLKEFSETLPTKVDVREYP 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E  A   A R       +  +     +  + +  V+LP    KS      ++    
Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVASQRKGTFEVVLPPFGKKSYFGFIGLKDADH 232


>gi|317492206|ref|ZP_07950635.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919545|gb|EFV40875.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 256

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 77/246 (31%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L   +   ++ +  A  L  IK  G +K G       +     +G   GFD
Sbjct: 1   MKK-MTLALLATSLFATSALAQAADDLAAIKSAGVMKFGTEGTYAPYTYHDKSGKLVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +   P    ++          L +K+ D +      T  R+      F  
Sbjct: 60  VDVARAVAEKMGVKPE---FVEGRWDGLIAGLSAKRYDAVINQVGITDERKA--KFDFSQ 114

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++      I S + L G     Q+ T+    LA    A       +  +  
Sbjct: 115 PYIGSKAVLVVRDDNTTIKSFADLKGQK-AAQSLTSNYSKLATKNGA-----DLVPTDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R  A   D  +    K         ++  D  +    A  + +   E   
Sbjct: 169 NQSLDLVLSGRAAATLNDNLSFLDFKKHKPDAKVKIVATD-ENTENSAILLRKDQPELVK 227

Query: 240 IVSWTH 245
            V+   
Sbjct: 228 AVNKAL 233


>gi|317057054|ref|YP_004105521.1| family 3 extracellular solute-binding protein [Ruminococcus albus
           7]
 gi|315449323|gb|ADU22887.1| extracellular solute-binding protein family 3 [Ruminococcus albus
           7]
          Length = 285

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 79/258 (30%), Gaps = 21/258 (8%)

Query: 1   MY--KDF--FVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKAN 53
           M   K     +S   +        + + S  GD K          G +     +     N
Sbjct: 1   MKYTKILTAMLSAAVMTAALAGCGAKDGSKSGDKKNSKGENTFTVGFDAEFPPYGYKDDN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G++ GFD+     +      +  K    P++   + + L S  ID +          +  
Sbjct: 61  GEYVGFDLSLAEEVCKRNGWELVK---QPIDWDSKDMELSSGSIDCIWNGFTINGREDA- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA------DYFKAH 167
               +      + Q  ++    GI  +S LSG  + VQA ++    L       D     
Sbjct: 117 --YTWTTPYVDNSQVVVVKADSGIEKLSDLSGKVVIVQADSSALHALTGDDASDDNKALA 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                               +   +A   D     A+    +R S+  IL + IS     
Sbjct: 175 ASFADLQQVGDYNSAFMNLDSGAAEAVCLDY--GVAVYEVANRGSDFKILDEKISTEQYG 232

Query: 228 PAIIQGDTEWYNIVSWTH 245
               +G+TE  + V  T 
Sbjct: 233 VGFQKGNTELRDKVQSTL 250


>gi|116514276|ref|YP_813182.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093591|gb|ABJ58744.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 500

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 89/264 (33%), Gaps = 26/264 (9%)

Query: 1   MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K      ++L L  LF  +             + +++  IKK G L  GI+       
Sbjct: 1   MKKLIKIMTALLLLAGLFTAAIPAVDAASSRKVASGTVMKKIKKSGKLVVGISADYPPLE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
               V     + G DV+  + ++  +      ++   ++     +AL++ +ID++     
Sbjct: 61  FTKNVNGKNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117

Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R+    + F  I Y    D        K   +S +   G ++  Q G+    +L  
Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                 +K   +       +  A ++ + DA             TND     V      +
Sbjct: 176 NAAKSGIKVKGLAKISN--LLMALKSGKLDAVLLGE-LNAKTYATNDTSLSLVKSSLSQA 232

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246
           +   A  + +G  +    ++ T  
Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256


>gi|84386734|ref|ZP_00989760.1| lysine-arginine-ornithine-binding protein [Vibrio splendidus 12B01]
 gi|84378540|gb|EAP95397.1| lysine-arginine-ornithine-binding protein [Vibrio splendidus 12B01]
          Length = 253

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 26/253 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V+ + +  +F  +           K    ++  +      F+    +G+ +GF+VD
Sbjct: 2   KWILVAFVSVFSVFTYA-----------KDWKQIRFTVEGAYPPFSWTTQDGELEGFEVD 50

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              AL   +     K      +      +L S++ D +      T  RE    + F    
Sbjct: 51  LANALCIEL---EVKCIISKTDWDGIIPSLLSRKNDAIIAAMTITEEREK--KVNFTMPY 105

Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 F+M K + I      L+  +I VQ  T  +  L++ +           +   +E
Sbjct: 106 AKVPTRFVMEKGREINMDDGSLNELTIGVQRATIGDKYLSEIYP----DVDIKRYGSFDE 161

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236
                   R D+  G    L A  L  D+  ++       ++          A+ + D E
Sbjct: 162 AFTDLLNGRLDSVFGGSMGLNAGFLETDQGKDYHFTGPKFTEEKWFGRGIGVAVRKQDDE 221

Query: 237 WYNIVSWTHYAMV 249
             +++      ++
Sbjct: 222 LKDLIDSGIQRLI 234


>gi|239931234|ref|ZP_04688187.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672]
 gi|291439606|ref|ZP_06578996.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342501|gb|EFE69457.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672]
          Length = 332

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 17/256 (6%)

Query: 16  FFTSFSTNASILGDIK-KRG---FLKCGINTGLVGFAEVKAN----GDWKGFDVDFCRAL 67
             +    +   +  IK +RG    L  G++     +     N    G  +GFD+D    +
Sbjct: 55  TLSPSRADGETIEAIKNRRGEKRKLIVGVDQNSYRWGYRNPNSGESGRLEGFDIDLVHRI 114

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  I  D   +Q+  +   +R  A+Q  ++D++ R       R     +AF    +  GQ
Sbjct: 115 AEDILGDADAVQFKAIPTDQRIPAIQDGRVDMVVRTMTINCAR--MEEVAFSAPYFRTGQ 172

Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183
             +  K   +      L+   IC  AG+T    L +  KA  +              +  
Sbjct: 173 QVLAPKSSPVEGYDGTLANRRICTAAGSTAYAKLEEDKKAGALPESTDIRTTVPNQLDCL 232

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +    DA   D +   +    +       +  +  +      A+ +   +    V+ 
Sbjct: 233 VRLQLGEVDAVVTDAALAASQAAQDP---TVRLKGEAFTTEYYGVAMKKDADDLVRRVNQ 289

Query: 244 THYAMVTAEELGITQK 259
                    E G    
Sbjct: 290 ILVDFREDTEDGWQSS 305


>gi|159026223|emb|CAO86379.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 299

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 111/307 (36%), Gaps = 22/307 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    V + C++ +F  S S   +++  + + GFL  G     + ++ V   G+  G+
Sbjct: 1   MKKILQLVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYVNDKGELVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            +D    +   +      P  +Q +  N     + L       ++ +T +T  R     +
Sbjct: 61  SMDVLERIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGDIDIACSTAFTWERAKV--V 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G   +  K   +S+   L G  I +   +     +               +
Sbjct: 119 DFSISYSISGIRILAKKGSNLSTPQSLIGKRIALVPTSAAVDVIKLVQPQA---TIVTTY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDT 235
             VEE   A +  + DA  GD  +L    L  D P  + I+P+    +  +A  + + ++
Sbjct: 176 STVEEALEALKTGKIDAIAGDSISLAGTILR-DNPKIYEIVPEEALANFGIACMVPENNS 234

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
            + + V++          + + Q  I       T   + R+ G      I   L L   +
Sbjct: 235 TFLDDVNYAI--------VKMMQDYITN--DTATVSQIDRWFGSQGMVPIPPEL-LKGFF 283

Query: 296 TYRIIRH 302
            +++I H
Sbjct: 284 AFKVIEH 290


>gi|295694799|ref|YP_003588037.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
 gi|295410401|gb|ADG04893.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
          Length = 265

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 19/235 (8%)

Query: 18  TSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
               T +S   +  + G      L  G +T    F   + NG   GFD+D  +A++    
Sbjct: 18  AGCGTGSSTPSNSGQSGQTQPVTLHVGADTTFPPFE-TEKNGQVTGFDIDLIKAIAQK-- 74

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            +  ++    ++ +    ALQ+  ID+       T  R+    + F    Y  G   ++ 
Sbjct: 75  -ENMQVDLKTMDFQGLIPALQTGDIDVAVAGITITDDRKK--SVNFSDPYYHSGLSILVK 131

Query: 133 KKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I+    L+G ++ V+ GTT     AD   +     +   F  + +  +  +    
Sbjct: 132 KDNTTINVPDDLTGKTVAVKLGTT-----ADLMFSKKPGVNVKRFTNISDAYSELQNGGA 186

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           DA   D         T        I+  +++      A+ +   +    ++    
Sbjct: 187 DAVVFDNPVNLNYIRTGHD--NVKIVGPLLTGEDYGIAVRKNAPDLLQKINDGLK 239


>gi|302554087|ref|ZP_07306429.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302471705|gb|EFL34798.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 317

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 19/255 (7%)

Query: 16  FFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
              S +  A  L   I+ +G +K G +           +G   G D D   A+   +  D
Sbjct: 45  GSASSAPLADKLPKSIRDKGVVKVGSDIAYAPVEFKDNSGKTVGIDPDLAAAMGKQLGVD 104

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITYF 124
               Q+           L+SK+ DI       T  R+  +          G+ F    + 
Sbjct: 105 ---FQFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSDTGKKVGEGVDFVD-YFT 160

Query: 125 DGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVE 180
            G      K   +GI + S L G  I +Q GT +E       K      K     F+  +
Sbjct: 161 AGVSIYTKKGDDQGIKTWSDLCGKKIVLQRGTVSEDLAKAESKKCPAGKKIAIEAFDNDQ 220

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +     RA    A + D         T+    +  ++ + +  +P   A+ +  T+  + 
Sbjct: 221 QAQTRLRAGGAAAGSSDFPVAAYAVKTSGGGKDFQLVGEQVEAAPYGIAVAKNQTQLRDA 280

Query: 241 VSWTHYAMVTAEELG 255
           +     A++ + E  
Sbjct: 281 LKAALDAVIKSGEYE 295


>gi|261822130|ref|YP_003260236.1| glutamine ABC transporter periplasmic protein [Pectobacterium
           wasabiae WPP163]
 gi|261606143|gb|ACX88629.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium wasabiae WPP163]
          Length = 248

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 82/247 (33%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  L ++   S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSLLKASLAALTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K    P++      ALQ++ ID+       T  R+    + F  
Sbjct: 51  IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I     L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYDSGLLVMVKADNNDIKGEQDLAGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + D I       A  +G+ E   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGNNELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|71064872|ref|YP_263599.1| ABC basic amino acid transporter, periplasmic binding protein
           [Psychrobacter arcticus 273-4]
 gi|71037857|gb|AAZ18165.1| ABC basic amino acid transporter, periplasmic binding protein
           [Psychrobacter arcticus 273-4]
          Length = 266

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 85/270 (31%), Gaps = 18/270 (6%)

Query: 3   KDFFVSILCLIILFFTSFST----NASILGDIKKRGF----LKCGINTGLVGFAEVKANG 54
           +  + S+     L   + S      A    D    G     ++         F    A+G
Sbjct: 6   RLLWSSMTVTAALVLGACSQPANDAADTNADTPAAGTSGKTIRIATEGAYPPFNYTNADG 65

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   AL   +    +K + +  +       L +++ D +      T  R    
Sbjct: 66  SLAGFDIDVANALCEQM---QAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAER--QE 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F    + +   ++   K        +   ++  Q  TT    L D +          
Sbjct: 121 KVDFSEPYFANTMVWLTDTKGS-FDPKVIKNLTLGGQRSTTPGAYLQDNY-EGKDGNTVK 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQG 233
           +++  +      ++ R D    +  +  +     D P    I+  +I +   +A A+ +G
Sbjct: 179 LYDSYDNAYLDLKSGRSDVVLAEKVSAKSWLA--DNPEGFGIVGDEIDNDDNIAIAVRKG 236

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           D    +            E   + QKN  Q
Sbjct: 237 DAIKEDFNKALSEIRSNGELARLEQKNFGQ 266


>gi|86147680|ref|ZP_01065988.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio sp. MED222]
 gi|218709553|ref|YP_002417174.1| ABC transporter substrate-binding protein [Vibrio splendidus LGP32]
 gi|85834461|gb|EAQ52611.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio sp. MED222]
 gi|218322572|emb|CAV18731.1| ABC transporter: substrate binding protein precursor [Vibrio
           splendidus LGP32]
          Length = 247

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 84/259 (32%), Gaps = 25/259 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L        ++             +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLSSAGMAVNASAQD---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +          AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCEEM---KATCTFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LKQVNFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI   +  ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 107 AYYDNSAAFISI-EGKVADQAALEGKRVGVQNGSTHQSFLLEQMA----GVTAVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
           +     +  R D+  GD + +       D  +   +   + ++         A+ + + E
Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKQDNLT--YVGDQVTNQEYFGNGFGIAVNKSNQE 219

Query: 237 WYNIVSWTHYAMVTAEELG 255
             + ++    A+    E  
Sbjct: 220 LVDQLNVALAAVKANGEYD 238


>gi|156742157|ref|YP_001432286.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM
           13941]
 gi|156233485|gb|ABU58268.1| extracellular solute-binding protein family 3 [Roseiflexus
           castenholzii DSM 13941]
          Length = 295

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 45/287 (15%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNA--------------------------------SI 26
           M K   +  +++  I+         A                                  
Sbjct: 1   MKKQMLLIVTLIAAILAISACGGAPAAQPTQPAAQPTQPAAQPTQPAAQPTQPATQPEGK 60

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I+  G L  G +     +  + ANG++ GFD+D  RA+   +     +++   +   
Sbjct: 61  LAQIRAAGKLIVGTSADYPPYESIDANGNFVGFDMDLIRAVGEKLG---VQVEIRDMPFD 117

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLS 144
               +LQ  +ID +      T  RE    + F          FI      I  S     +
Sbjct: 118 SLIASLQEGKIDAVIAAMQATAEREE--KVDFTIPYRMTKDAFIGAGDTTIVMSKPEDAA 175

Query: 145 GASICVQAGTTTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           G +I  Q GT  E  +     A  +        +ER ++      + R      D  A  
Sbjct: 176 GMTIGAQTGTVQEGWIQKNLVATGLTPADKVFSYERADQAALDLASGRLQLVLMD--AEP 233

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           AL+L      + +++ +  ++   + AI +G  +    +      ++
Sbjct: 234 ALELAQKNNLKVLLVTETTAEGGKSIAIPEGAGDLKAELDRIIQGLI 280


>gi|319783613|ref|YP_004143089.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169501|gb|ADV13039.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 261

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 16/224 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L+ G       F  + A+G   GFD+D  +AL   +     K  ++  +      A
Sbjct: 24  QEKTLRIGTEGAYPPFNNLTADGQLVGFDIDIAKALCDEM---KVKCTFVAQDWDGIIPA 80

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
           LQ+ + D +  +   T  R+    + F    Y       + K   +   +   L+G +I 
Sbjct: 81  LQAGKFDAIVASMSITPERKE--KVDFSNKYYNTPSAIAVPKDSTLKGVTKEDLAGKTIG 138

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V   TT     +  +           +    E  A     R DA   DI  L     + D
Sbjct: 139 VATTTTHFNYASKTY----TDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQFLDSPD 194

Query: 210 RPSEHVIL-PDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248
                ++  P         P    A+ +G+T+  N ++    A+
Sbjct: 195 GACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNSAIAAI 238


>gi|116254532|ref|YP_770368.1| putative substrate binding periplasmic component of ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|115259180|emb|CAK10298.1| putative substrate binding periplasmic component of ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 280

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 17/261 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +  F++    + +   + S  A+   L  IK  G +K G+      F+    NG   G+D
Sbjct: 6   RRLFLAATMGLAVAVGAGSAMAAERTLAAIKADGVIKIGVEGVFAPFSYR-ENGVIVGYD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +   P    ++         AL S + DI+  +  +T  R     + F  
Sbjct: 65  VDLAEMMFKDLGVKPE---FVDTQWSGIVPALLSSKFDIIMSSLSYTKER--MQKVNFSI 119

Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF-----KAHNMKYHP 173
                    ++    +  I S   +SG  I ++AGT  E ++  +         N     
Sbjct: 120 PYADSSLAMLVRAADESTIKSFDDMSGKPIAIKAGTPEEASMPKFNEQVEKAKGNGFGEV 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            VF+       A      D    +++ L  +      P ++ ++ ++   S     I + 
Sbjct: 180 KVFDSEPMSILALNQGTVDGVISNMTNLGLVIKNA--PGKYALVQNVAGSSLAGIGIRKE 237

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           D E    +     A   + +L
Sbjct: 238 DEELRKYIDEQLLAATKSGKL 258


>gi|238789652|ref|ZP_04633435.1| Arginine-binding periplasmic protein 2 [Yersinia frederiksenii ATCC
           33641]
 gi|238722205|gb|EEQ13862.1| Arginine-binding periplasmic protein 2 [Yersinia frederiksenii ATCC
           33641]
          Length = 243

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I  L  + F++ +              ++   +     F  +  N +  GFD
Sbjct: 1   MKKLLLATI--LSGMVFSATAAE-----------TIRFAASATYPPFESIGTNNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R  S  + F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPER--SKQVTFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +T   
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPENTALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNKAIDAV 227


>gi|13473306|ref|NP_104873.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
 gi|14024054|dbj|BAB50659.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
          Length = 267

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 16/254 (6%)

Query: 2   YKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
              +  S++    L     +     + L  IK+ G +K G       F    A+G   GF
Sbjct: 10  KMKWLKSLIVAGTLQALAVTSGHAGANLDQIKQAGVIKVGTEGTYAPFTYHDASGALVGF 69

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  +A++  +      +++L          L  K+ D +      T  R+      F 
Sbjct: 70  DVEIAKAIADKLGVK---VEFLEGKWDGLIAGLDVKRYDAVINEVGITDARKA--KYDFS 124

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                     I+      I + + L G     Q+ T+    LA+   A       +  + 
Sbjct: 125 DPYIASKAVLIVRGDNTDIKTFADLKGKKSA-QSLTSNFGKLAEASGA-----ELVGTDG 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            ++        R DA   D  +    K      +  +   +  +       + +GD E  
Sbjct: 179 FDQSIQLLLTGRADATINDSLSFLDFKKHKPDANVKIAAQE-ENADYSGVIVRKGDAELV 237

Query: 239 NIVSWTHYAMVTAE 252
             ++    A + A+
Sbjct: 238 AAINKAL-ADIKAD 250


>gi|170721100|ref|YP_001748788.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169759103|gb|ACA72419.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 261

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 90/261 (34%), Gaps = 13/261 (4%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +  F++ L             A  L DI  RG LK  +      F  V  +   +G
Sbjct: 1   MKTFRTLFLASLFCSSALMLPT-AQADALADISARGVLKVAVPQDFPPFGSVGPDLKPRG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  + L+  +      +   P+N+  R   L + ++D++  +      R     + F
Sbjct: 60  LDIDTAQLLADKLGVK---LALTPVNSTNRIPFLTTGKVDLVISSLGKNPERAAV--IDF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          +  I+ +  ++G +I V  G+  ++ L+              FE 
Sbjct: 115 SRPYAPFYLAVFGPAEVDIAGIDAVAGKTISVTRGSIEDMELSAVAPK---GAVIKRFED 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                AAY + + +        + A+      P++  ++   +  SP+   + + +    
Sbjct: 172 NNSTIAAYLSGQVELIASGSVVMAAIAQ--KNPAKVPVVKVKLKDSPVYVGLAKNEPALL 229

Query: 239 NIVSWTHYAMVTAEELGITQK 259
           + V+ T  A      L    +
Sbjct: 230 DKVNATLEAAKADGSLNRNAE 250


>gi|116254850|ref|YP_770686.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259498|emb|CAK10636.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 273

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 26/276 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M      ++L    L  ++ +  A           ++ G+ N     F    A+G W+G+
Sbjct: 17  MK--LLPTLLAGAALVLSAVTAQA----------EVRFGVMNESYPPFFAKDASGQWQGW 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+   +     K   + ++      ALQSK+ D++  +   T  R     + F 
Sbjct: 65  EIDLMNAVCEEM---KEKCSIVEISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 119

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K +   ++   + G +I +Q  T        YF A         ++ 
Sbjct: 120 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFAAA---AEEKTYQT 176

Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           ++E      + R D   GD  AL   LK    +     +      K  L   +  G  + 
Sbjct: 177 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEILGAGVSGGLRKE 236

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
              +       + A          + ++K   + D+
Sbjct: 237 DTELKAKLNTAIAA---VRASGQYDAINKKYFDFDI 269


>gi|317048781|ref|YP_004116429.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Pantoea sp. At-9b]
 gi|316950398|gb|ADU69873.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. At-9b]
          Length = 265

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 86/241 (35%), Gaps = 21/241 (8%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L + +L   +F   A     I +   ++  ++     F      G   GFD+D   AL  
Sbjct: 14  LAMAVLAGCAFGAQA----KIDQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCE 66

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    +K  ++         AL++++ D +  +   T  R     + F    Y      
Sbjct: 67  QM---KTKCVWVESQFDGMIPALKARKFDAILSDMGVTEER--LKQIDFTVPLYDTKTQL 121

Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           I  K  G + +   L G ++ V+ GT  E      ++ +    + + +    ++++   +
Sbjct: 122 IARKGSGLLPTAESLKGKTVGVEQGTVQERYARAKWQPNG--VNVVPYGDQAQVESDLVS 179

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243
            R DA   D +      L   +  +   L     + P+     A  + +GDTE    +  
Sbjct: 180 GRLDAVFTDAAQAAIGFLKQPQGKDF-ELAGPTVQDPIIGPGTAIGLRKGDTELKTALDD 238

Query: 244 T 244
            
Sbjct: 239 A 239


>gi|238784967|ref|ZP_04628966.1| Arginine-binding periplasmic protein 2 [Yersinia bercovieri ATCC
           43970]
 gi|238714182|gb|EEQ06195.1| Arginine-binding periplasmic protein 2 [Yersinia bercovieri ATCC
           43970]
          Length = 243

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL  ++   T+                ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATILSGMVFSATAA-------------DTIRFAASATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S+ + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDMHPE----IQTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +T   
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNKAIDAV 227


>gi|209551039|ref|YP_002282956.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536795|gb|ACI56730.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 274

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 81/238 (34%), Gaps = 11/238 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + +A+ + +IK +G L  GI      +  V  +G   GFD D     +  +      
Sbjct: 22  GATTASAATVEEIKAKGTLVVGIQGDNAPWGFVNTSGKQDGFDADIATLFAKELGVK--- 78

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++ PL    R  AL + ++DIL      T  R     + +      +       K   +
Sbjct: 79  VEFQPLAVANRIPALTTGKVDILFATMAMTEERAK--SIQYSKPYAANTISLYAAKADAV 136

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            + + ++   I V   ++ +  + D   A         F+       A  + +  A  G+
Sbjct: 137 KAPADVAAWEIGVPKSSSQDKAVTD---AVGSTATIRRFDDDAATIQALISGQVKAVGGN 193

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               Y  +L       +    D   K+        G+ +W    +     +  + EL 
Sbjct: 194 --QFYGQRLDAASAGTYERKID-FLKTYNGVGTRLGEKDWNEAANSFIDKIKASGELA 248


>gi|126699383|ref|YP_001088280.1| amino acid ABC transporter substrate-binding protein [Clostridium
           difficile 630]
 gi|255306801|ref|ZP_05350972.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile ATCC 43255]
 gi|115250820|emb|CAJ68644.1| ABC-type transport system, aminoacid-family extracellular
           solute-binding protein [Clostridium difficile]
          Length = 267

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 84/258 (32%), Gaps = 16/258 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M        +  I+L         S   + K +         +  G +   V    +   
Sbjct: 1   MKNILKKVGIFTIMLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREI 112
           GD  GFDVD  +     +     ++++ P++   +   L   + +D+L      T  R+ 
Sbjct: 61  GDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMK 170
              +++      + Q  +      I+S + L    +  Q G+T    +     F      
Sbjct: 118 I--VSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKG 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             P++++  ++        R  A  GD   +    +      ++ +L D         A 
Sbjct: 176 GAPVLYDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVAT 234

Query: 231 IQGDTEWYNIVSWTHYAM 248
            + + E    ++ T   M
Sbjct: 235 SKENPELCEKINETLKEM 252


>gi|254975411|ref|ZP_05271883.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-66c26]
 gi|255314540|ref|ZP_05356123.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-76w55]
 gi|255517215|ref|ZP_05384891.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-97b34]
 gi|255650321|ref|ZP_05397223.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-37x79]
 gi|260683434|ref|YP_003214719.1| amino acid ABC transporter substrate-binding protein [Clostridium
           difficile CD196]
 gi|260687030|ref|YP_003218163.1| amino acid ABC transporter substrate-binding protein [Clostridium
           difficile R20291]
 gi|306520288|ref|ZP_07406635.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-32g58]
 gi|260209597|emb|CBA63246.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile CD196]
 gi|260213046|emb|CBE04400.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile R20291]
          Length = 267

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 84/258 (32%), Gaps = 16/258 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M        +  I+L         S   + K +         +  G +   V    +   
Sbjct: 1   MKNILKKVGIFTIMLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREI 112
           GD  GFDVD  +     +     ++++ P++   +   L   + +D+L      T  R+ 
Sbjct: 61  GDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMK 170
              +++      + Q  +      I+S + L    +  Q G+T    +     F      
Sbjct: 118 I--VSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKG 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             P++++  ++        R  A  GD   +    +      ++ +L D         A 
Sbjct: 176 GAPVLYDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVAT 234

Query: 231 IQGDTEWYNIVSWTHYAM 248
            + + E    ++ T   M
Sbjct: 235 SKENPELCEKINKTLKEM 252


>gi|93005156|ref|YP_579593.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
           K5]
 gi|92392834|gb|ABE74109.1| extracellular solute-binding protein, family 3 [Psychrobacter
           cryohalolentis K5]
          Length = 266

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 18/270 (6%)

Query: 3   KDFFVSILCLIILFFTSFST----NASILGDIKKRGF----LKCGINTGLVGFAEVKANG 54
           +  + SI     L   + S      A    D    G     ++         F    A+G
Sbjct: 6   RLLWSSITVTAALMLGACSQPANDAADTNADAPAAGTTGKTIRIATEGAYPPFNYTNADG 65

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   AL   +    +K + +  +       L +++ D +      T  R    
Sbjct: 66  SLAGFDIDVANALCEQM---QAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAER--QE 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F    + +   ++   K        +   ++  Q  TT    L D +          
Sbjct: 121 KVDFSEPYFANTMVWLTDTKGS-FDPKVIKNLTLGGQRSTTPGAYLQDNY-EGKDGNTVK 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQG 233
           +++  +      ++ R D    +  +  +     D P    I+  +I +   +A A+ +G
Sbjct: 179 LYDNYDNAYLDLKSGRSDVVLAEKVSAKSWLA--DNPEGFGIVGDEIDNDDNIAIAVRKG 236

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           D    +     +      E   + Q+N  Q
Sbjct: 237 DAIKEDFNKALNEIRSNGELARLEQQNFGQ 266


>gi|300931332|ref|ZP_07146664.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 187-1]
 gi|300460837|gb|EFK24330.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 187-1]
          Length = 260

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 97/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      E       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKEFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE     +          EL       ++++K   + +V
Sbjct: 226 TELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|213586572|ref|ZP_03368398.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 232

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +K+RG L  G+      F+    +G   GF+VDF  AL+  +          P      
Sbjct: 2   KVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGM 58

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGA 146
             +L SK+ID++      + +R+      F       G   ++ K     I + + L G 
Sbjct: 59  LASLDSKRIDVVINQVTISDVRKK--KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGK 116

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            + V  GT  E  L  +            ++         R  R DA   D   L AL L
Sbjct: 117 KVGVGLGTNYEEWLRQHV----QGVDIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDL 170

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    +  D  S+     A+ +G+ +    V    
Sbjct: 171 VKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAI 209


>gi|293396871|ref|ZP_06641145.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
 gi|291420342|gb|EFE93597.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
          Length = 243

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 83/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I +   +                ++         F  V A+   +GFD
Sbjct: 1   MKKLIIAAVLAGISVSAIAAE-------------TIRFATEASYPPFEFVGADNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +          +L+ K+ D +    D T  RE    + F  
Sbjct: 48  VDLANAMCKEM---QATCTFTNQAFDSLIPSLKFKRFDAVMAGMDITPEREK--QVLFTK 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L G  + VQ GTT +  L D           + ++  +
Sbjct: 103 PYYDNSALFIAQKG-KVADVASLKGKKVGVQNGTTHQKFLTDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      ND  +     +       + L  A+ Q +T+  
Sbjct: 158 NAILDLKNGRVDAVFGDTAVVNEWLKQNDALTAVGDKVTDKGYFGTGLGIAVRQKNTDLQ 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 GKFNAAL 224


>gi|312115327|ref|YP_004012923.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220456|gb|ADP71824.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 257

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 87/257 (33%), Gaps = 26/257 (10%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     +L L+ L F    + +A           L+         F+ + A G+  GF
Sbjct: 1   MVKASLTRLLALVCLAFLLPLTASAQT--------KLRIATEGTNPPFSIIDARGEVTGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  +AL + +    ++ +    +      +L +K+ D +  + + T   +    +AF 
Sbjct: 53  DVDIAKALCAKM---QAECEITEQDWDGIVPSLLAKKYDAVVASLNITE--DRKNVVAFT 107

Query: 120 PITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y     F++ K       S   L+G  + VQ  T     L D       +    ++ 
Sbjct: 108 KPYYRSPSVFVVRKGFDAKDVSPKALTGKPVGVQTATNHSAFLED----KYHRSIVRLYN 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQ 232
            V +      A R D    D  A+Y   L         I P  ++           A+ +
Sbjct: 164 TVADAYRDLSAGRVDYVLYDKLAVYDW-LKTPEGQCCEIAPTELADEAYFGSGVGIALRK 222

Query: 233 GDTEWYNIVSWTHYAMV 249
           GD       +     +V
Sbjct: 223 GDDALVKRFNDALDGIV 239


>gi|290580725|ref|YP_003485117.1| putative amino acid transporter amino acid-binding protein
           [Streptococcus mutans NN2025]
 gi|254997624|dbj|BAH88225.1| putative amino acid transporter amino acid-binding protein
           [Streptococcus mutans NN2025]
          Length = 271

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 19/265 (7%)

Query: 1   MYK--DFFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52
           M K     + I+  ++L      S S+    L  IK +G +   +N     F     V  
Sbjct: 1   MKKLKKILLGIIAALMLVALAACSSSSKDDSLQKIKDKGKIVVAMNPEFAPFEFKTLVNG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G DV+  +A++  +      +++  ++      ++QS + DI       T  R+ 
Sbjct: 61  KDTIVGADVEIAKAIAKELGVK---VEFSAMSFNNVLSSVQSGKADIGISGISATKERQK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                F    Y      I+ K +       + L G S+  Q GT  E    +        
Sbjct: 118 V--YDFSDTYYESVNVVIVKKSELAKYKKTNSLKGLSVATQKGTIQETVAKEQL----TG 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +   +  E+    ++ + +    +          ND  +   I     S    A A+
Sbjct: 172 AKIVSLVQNGEMINELKSGQVNGVVLEKPIAEGYVAKNDDLAIAQIKLKSSSSDAYAVAM 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255
            +G +     V      +  A ++ 
Sbjct: 232 PKGSSALKKKVDKVIKKLKKANKID 256


>gi|91225248|ref|ZP_01260416.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
 gi|91189887|gb|EAS76159.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
          Length = 256

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K + +  +
Sbjct: 16  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSIKGFDVDMANALCEEM---QVKCKIVAQD 72

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K  G+     L 
Sbjct: 73  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLK 129

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              I VQ  TT +  L D +         + +   +E        R  A  GD SAL   
Sbjct: 130 DVKIGVQRATTHDKYLTDNY---GDDVEIVRYGSFDEAYLDLENGRIAAVLGDASALEEG 186

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            +       +  +   ++        +  A+ + D +    +    
Sbjct: 187 VINKAGGEAYEFVGPSLTDPKWFGEGMGIAVRKQDKDLTKKLDAAI 232


>gi|59711877|ref|YP_204653.1| cyclohexadienyl dehydratase precursor [Vibrio fischeri ES114]
 gi|59479978|gb|AAW85765.1| cyclohexadienyl dehydratase precursor [Vibrio fischeri ES114]
          Length = 254

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 100/268 (37%), Gaps = 17/268 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K       C+ +LF  SF+ +A  L +I++ G ++ G       F+       + G+D
Sbjct: 2   MKKKLL----CISVLFAASFTAHADRLDEIQEAGIIRVGTTGDYKPFSSFDGK-QFSGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +     K++ +  + K     L + + DI        + R++    +   
Sbjct: 57  IDVAKYIAEQL---DVKLELVQTSWKNLIPDLNADKYDIAMGGITRKIQRQLHAEQSQGY 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +T+         K +  +++ +++ +S  +         +  +   H        ++   
Sbjct: 114 MTFGKCFLVAKGKAETYNTIDKVNKSSTRLGINIGGTNEI--FADTHLQSATFTRYKNNL 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + D    +       + T+ R  E     D  +KS     + +G+ E  N 
Sbjct: 172 DVPQAVATGKVDVMVTETPEALYYQATDKR-LEASRCDDPFTKSQFGYLVPKGEQELLNA 230

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT 268
           V++        +E+ +   +   + K+ 
Sbjct: 231 VNFIM------DEMKLKGVDKELMKKNA 252


>gi|33601619|ref|NP_889179.1| putative glutamine-binding periplasmic protein precursor
           [Bordetella bronchiseptica RB50]
 gi|33576056|emb|CAE33135.1| putative glutamine-binding periplasmic protein precursor
           [Bordetella bronchiseptica RB50]
          Length = 247

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 83/229 (36%), Gaps = 21/229 (9%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + +A           ++   +        V  +G   GFD++   AL+ A+      
Sbjct: 19  GAGAAHAQE--------TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAQAMGKK--- 66

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I+++ ++ K    ALQ+ + DI       T  R+    + F    Y  G   +  K   +
Sbjct: 67  IEWIDIDFKGLIPALQAGRADIAVSAIYITAERQKV--VDFTDPYYAGGLVVLTKKDGPV 124

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S+  L G  + VQ GT +   L ++F         +  E+ +E+    +  R DA    
Sbjct: 125 KSLKDLEGRKVSVQVGTKSVNYLKEHFPK----VQRVEVEKNQEMFNLVQIGRADAAVTG 180

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                A KL      +  +L + I+      A+ +  +     ++    
Sbjct: 181 KP---AAKLFAQSTQDLAVLSEQITTEEYGIAVPKSKSGLTRELNEALK 226


>gi|221218204|ref|YP_002524231.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Rhodobacter sphaeroides KD131]
 gi|221163231|gb|ACM04197.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Rhodobacter sphaeroides KD131]
          Length = 280

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 12/248 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+K G ++ G+      F     +G  +G +V+  + +    F      +   + ++ 
Sbjct: 35  EAIQKAGKIRIGVKCDSPPFGASGPDGKPRGIEVEMAKKIGDYAFGSEEGAELSCVTSEA 94

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  +L + ++D++      T  R+    + +  I ++     ++     +  +S L G S
Sbjct: 95  RISSLNAGKLDLIIATLGRTAARQEV--IDYSNIYFWGTSNVLVPADSPVQKLSDLQGRS 152

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G T    L     A+      +      +   A    R D + GD   +Y L   
Sbjct: 153 VLVVKGATQIKWLE----ANIPDISIVQLNTTADGVQALMQGRADGFVGDGGLIYTLGGN 208

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
             +     ++ + +        + +G+TE    V+     +   +        I Q  ++
Sbjct: 209 YPK---LRVIEEGLDLGVNGVGMRKGETELQTFVNAVLDELRKGDFYETV---IPQFVEE 262

Query: 268 TTNPDVQR 275
               DV +
Sbjct: 263 PAVVDVMK 270


>gi|242240915|ref|YP_002989096.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242132972|gb|ACS87274.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 275

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 77/257 (29%), Gaps = 16/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58
           M K    +++   +L   + +     L   IK +G L   I                  G
Sbjct: 1   MKKIMLSALITGALLGSAAHAAI--TLPDSIKSKGELTVAIMPNYPPMEFKDPATNQLMG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D D    ++  +      I +  +  ++   A+ +K++D++      T  R+    ++F
Sbjct: 59  VDYDLGMEMAKKLGVK---INWQEIGFEQMINAVATKRVDMIMSGMTDTQERQKV--VSF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHP 173
                   Q +    +  I  ++ L G  +     TT    +A + KA+           
Sbjct: 114 VDYFSTGPQFYTTTSRSDIKELTDLCGKRVGSSRRTTFPAEIAAWSKANCEAAGKPAIDV 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  E   +  A  R  R D        L  +         +  L    S       I   
Sbjct: 174 VGAEGTADARAQLRQRRLDGAVQGSETLPYIMNLEKD--TYKPLGKAFSFQLTGIGIDNK 231

Query: 234 DTEWYNIVSWTHYAMVT 250
           D      V     AM+ 
Sbjct: 232 DPVLVAAVQAAFNAMIA 248


>gi|218191223|gb|EEC73650.1| hypothetical protein OsI_08176 [Oryza sativa Indica Group]
          Length = 449

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 94/311 (30%), Gaps = 51/311 (16%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSIFKVSLAALSLAFAVSSHAA----------DKLVVATDTAFVPFEFKQGD-KYVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +  D       P++      ALQ+K +D+       T  R+    + F  
Sbjct: 50  IDLWAAVAKELKLDY---TLKPMDFGGIIPALQTKNVDLALAGITITDERKK--AIDFSD 104

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      +  +  L+G  + V++GT +      + K          F  +
Sbjct: 105 GYYKSGLLVMVNADNNSVKGIDDLNGKVVAVKSGTGSVDYAKQHIKTK----DLRQFPNI 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T         + D +       A  +G      
Sbjct: 161 DNAYMELGTKRADAVLHDTPNILYFIKTAGAGK-FKTVGDSLEAQQYGIAFPKGSDALRE 219

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS------NIGEAL--- 289
            V+                     + ++ T  ++ +++ G +         + G  L   
Sbjct: 220 KVNGALK----------------TLRENGTYNEIYKKWFGTEPKGRQNDPVDFGPRLIGG 263

Query: 290 ---GLTKDWTY 297
              GL   +  
Sbjct: 264 LIIGLVAGFAR 274


>gi|70729567|ref|YP_259305.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68343866|gb|AAY91472.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 250

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 17/243 (6%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
                 L   + +  A           LK         F  V +N    GFDVD   AL 
Sbjct: 7   FAGACALVIAASTAQAET---------LKIATEGAYPPFNYVDSNNQLHGFDVDIANALC 57

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +  +    Q +  + +    AL +K+ D +  +   T  R+    +AF    Y     
Sbjct: 58  KQMKVE---CQIVAQDWEGIIPALLAKKYDAVVASMIATDERKK--KIAFSNHYYRTPLS 112

Query: 129 FIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             + K   I+       G ++  QA +T  +   D++           +  ++E ++   
Sbjct: 113 VAVAKDSDITDAQTNFKGRTVGAQASSTQAIYAEDHYGPAGAD--VKFYPTLDEANSDLA 170

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           A R D    D   L A   +  +    +I     + +  + A+ + D      ++     
Sbjct: 171 AGRVDGVIADKFPLLAWAESTGKDCCKIIGDVNGTTADASIAVRKEDNALRERLNKALDE 230

Query: 248 MVT 250
           +V 
Sbjct: 231 IVA 233


>gi|2108229|gb|AAC45332.1| high affinity cystine binding protein [Lactobacillus reuteri]
          Length = 264

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 19/216 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS-------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K +  ++L +  L   + +        ++++  ++K +G L  G+      ++    N
Sbjct: 1   MMKFWKKALLTVAALTLGTSAGISSIHAASSAVNSELKNKGELTIGLEGTYSPYSYR-KN 59

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GF+VD  +A++  +       +++P         L S + D++  N   T  R   
Sbjct: 60  NKLTGFEVDLGKAVAKKMGLKA---KFVPTKWDSLVAGLGSGKYDVVMNNITQTPERAK- 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F           I+     I S+  + G  +    GT           A       
Sbjct: 116 -QYNFSTPYIKSRFALIVPADSKIKSLKDIKGKKVVAGTGTNNADI------AKKFGAKL 168

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           +            +  R DA      A YA    N 
Sbjct: 169 VPNGDFASAVGMIKQGRADAEINSREAWYAYSKKNS 204


>gi|258423136|ref|ZP_05686030.1| polar amino acid ABC transporter [Staphylococcus aureus A9635]
 gi|257846700|gb|EEV70720.1| polar amino acid ABC transporter [Staphylococcus aureus A9635]
          Length = 485

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQNQTWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVSEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|51596867|ref|YP_071058.1| glutamine ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|153948725|ref|YP_001400473.1| glutamine ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|186895948|ref|YP_001873060.1| glutamine ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51590149|emb|CAH21786.1| ABC tranporter, periplasmic glutamine-binding protein glnH
           [Yersinia pseudotuberculosis IP 32953]
 gi|152960220|gb|ABS47681.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|186698974|gb|ACC89603.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis PB1/+]
          Length = 247

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 85/251 (33%), Gaps = 22/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSLVKVSLAALTLAFAVSAYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K    P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  IDLWDAIAKKL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I S + L G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYNSGLLVMVKADNNDIKSEADLQGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T     +   + + I       A  QG ++   
Sbjct: 162 DNAYLELGTGRADAVLHDTPNILYFIKTAGNG-QFKAVGESIKAQQYGVAFPQG-SDLRE 219

Query: 240 IVSWTHYAMVT 250
            V+    ++  
Sbjct: 220 KVNAALKSLKE 230


>gi|329116638|ref|ZP_08245355.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
 gi|326907043|gb|EGE53957.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
          Length = 270

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 80/253 (31%), Gaps = 17/253 (6%)

Query: 2   YKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55
            K    S++    L+ L     S+  S+   IKK G L   ++     F           
Sbjct: 3   KKQILTSVVATMALLSLSACGNSSKESLQDQIKKDGKLVVALSPDYAPFEFKTLQNGKDT 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +      ++  P++      ++Q+ + D+      +T  R     
Sbjct: 63  IVGSDVQLAQAIADELGVK---LEISPMSFDNVLSSVQTGKADMAISGISYTEERAKV-- 117

Query: 116 LAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      ++    K  + ++  L+   + VQ GT  E    +  K+     H 
Sbjct: 118 YDFSKPYYSTENAILIKASNKNQLQNLDSLANKKVAVQKGTIEEGLSKEQLKS----SHI 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +    + E     ++ + DA   +          N   +              A A+ +G
Sbjct: 174 VSLTAMSEAVNELKSGQVDAVDLEGPVAEGYLAQNPELAIADYKLKTSEGDAKAVAMPKG 233

Query: 234 DTEWYNIVSWTHY 246
             E     +    
Sbjct: 234 SKELKATTNKVIT 246


>gi|293410667|ref|ZP_06654243.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B354]
 gi|331663826|ref|ZP_08364736.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA143]
 gi|291471135|gb|EFF13619.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B354]
 gi|331059625|gb|EGI31602.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA143]
          Length = 260

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTVDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|291541188|emb|CBL14299.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Roseburia intestinalis
           XB6B4]
          Length = 284

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 80/276 (28%), Gaps = 37/276 (13%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNASIL------------------------GDIKKRGF 35
           M K     +L  ++     +  +N++                           D  ++  
Sbjct: 1   MKKKVISILLTAVLATGMAACGSNSNTAGNSANNTADNAQNTAETSTESTGSADSAEKPV 60

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G+      +     NG   GF+VD   A+   +  D   +Q++         AL + 
Sbjct: 61  LTVGMEGTYAPYTYHDENGTLTGFEVDMANAIGEKMGYD---VQFVETEWDSITAALDAG 117

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
             D++      T  R+      F     +     I+      I+S   ++G        +
Sbjct: 118 NFDVVMNQVTITDERKE--KFDFSTPYIYSKPVLIVAADNTDINSFEDINGKKAAEGLTS 175

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                 +D  +++      +  ++         +   D    D       K         
Sbjct: 176 ----NFSDIARSYG--AEIVGQDKFALAMECVLSGEADCAINDELTYAYWKQQKGGEDST 229

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            I+ +  + +  A  + +G+ E    ++     ++ 
Sbjct: 230 KIVAETDNVNSSAIMVKKGNDELIEKLNSAIDELLA 265


>gi|67921185|ref|ZP_00514704.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
 gi|67857302|gb|EAM52542.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
          Length = 232

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 10/211 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L ++     S    IL  I++ G ++ G       F  V   G+W G+ 
Sbjct: 1   MKK-ILGMMLSLALVAVPLKSVAEPILQRIERTGTIRAGAWKDAKPFGYVNEKGEWVGYS 59

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           +D  R + S +    D P K++ + ++ +     ++ +++DI    T +T  RE    + 
Sbjct: 60  IDIMRVIQSQVETALDKPIKLELVEVDTQNFLDHVRDRKVDISCGPTSFTWNRERY--ID 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +  G   ++ K   I SV +L    I ++A TT E  L             IV  
Sbjct: 118 FSISYFVTGTQVLVKKGVTIDSVEELKTKRIGLEANTTNEAVLKTLAP----DLQVIVVN 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
              +  A  +    D Y GD   L ALK   
Sbjct: 174 SRSDGFAKLQQGVIDGYAGDGILLEALKPRF 204


>gi|306845741|ref|ZP_07478310.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
 gi|306274062|gb|EFM55889.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
          Length = 253

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R DA   D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDNDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|294101063|ref|YP_003552921.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
 gi|293616043|gb|ADE56197.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
          Length = 251

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 88/248 (35%), Gaps = 19/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + + C+ ++   S    A        +     GI+     ++ +  +G   GFD
Sbjct: 1   MKKIGVLLLCCIFVVLGASNVLAAD-------KKTYIVGIDGDYYPYSFIGQDGKPAGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + ++  +  +   ++  P+       AL +K+ID++      T   E    +AF  
Sbjct: 54  VESIQWIAKEMGFE---VKVQPMAWDGIIPALLAKKIDMVYSGM--TASPERREVVAFSK 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHN--MKYHPIVFE 177
           + +   Q   +      +  +   G  +I  Q G T  + L DY          +  +++
Sbjct: 109 VYWIINQAVCVRNNTDTNMGNLFDGKHTIGTQRGCTAAMWLEDYVVKTGIIPSQNLKLYD 168

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +           +  I+  I +    A A+ + D E 
Sbjct: 169 NFPLAAKDLENGRIDAAMMDDVIVA----KAVEGKDMKIIGTISTGEEYAVAMRKEDKEL 224

Query: 238 YNIVSWTH 245
           +++++   
Sbjct: 225 HDLINEGL 232


>gi|269967640|ref|ZP_06181690.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
 gi|269827727|gb|EEZ82011.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
          Length = 258

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K + +  +
Sbjct: 18  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSIKGFDVDMANALCEEM---QVKCKIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K  G+     L 
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLK 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              I VQ  TT +  L D +         + +   +E        R  A  GD SAL   
Sbjct: 132 DVKIGVQRATTHDKYLTDNY---GDDVEIVRYGSFDEAYLDLENGRIAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            +       +  +   ++        +  A+ + D +    +    
Sbjct: 189 VINKAGGEAYEFVGPSLTDPKWFGEGMGIAVRKQDKDLTKKLDAAI 234


>gi|119946458|ref|YP_944138.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
 gi|119865062|gb|ABM04539.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 258

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 25/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++ L  L                    ++ G+      F++ +A+G   GFD
Sbjct: 1   MKK--MSMLIALFTLSVNVAQAKQWT--------QIRIGVEGAYPPFSQTEADGSVTGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +  D      +  +      AL +++ D +    D T  R+  +   F  
Sbjct: 51  IDIANALCAEMKAD---CTLIKQDWDGIIPALMARKFDAIVATMDITEERKKRVA--FTN 105

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F   K      S + ++G  + VQ  T+ +L ++D +           +   
Sbjct: 106 KYQHIPARFAALKGTEYQASPAFMAGKKVGVQRATSMDLYISDNYPEA----EIKRYGSA 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISK-SPLAPAIIQGD 234
           +E     +A R D    D +A+    L  +   +       L D          A+ Q D
Sbjct: 162 DEAYLDLKAGRLDYIMADSAAITGGLLEKEGGDKFELVGPKLNDPKWFGEGAGIAVRQQD 221

Query: 235 TEWYNIVSWTHYAM 248
            +  +  +    A+
Sbjct: 222 KDLVDQFNAAIKAI 235


>gi|78358781|ref|YP_390230.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78221186|gb|ABB40535.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 261

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 16/226 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  IK+ G +   ++ G   F     + +  GFDVD  + ++S +      + ++P+ 
Sbjct: 29  DALSRIKEAGEISFAMSGGYPPFNFYNDSNELTGFDVDVAKEVASRLG-----VAFVPVT 83

Query: 85  --AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    L+S   D +  +   T  R     + F    Y+ G   ++      ++  +
Sbjct: 84  TEWSGIIEGLRSGAYDGILGSMAVTPERLKV--VNFSNAYYYSGAQVMVKDSAPYTAPQE 141

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G    V  GTT     A+  +         +++   +          DA   D   + 
Sbjct: 142 LKGKVFGVVTGTTF----AEDAEKLGAG-EVRLYKDDTQTLLELDNGVVDAVITDR--VV 194

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +   N       +L   +    +A A  +G+      V+    AM
Sbjct: 195 GVNAVNSGRFNIRMLGAPLRSENIAVAFRKGEDTLLKEVNAVLAAM 240


>gi|187730169|ref|YP_001881132.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           boydii CDC 3083-94]
 gi|193062441|ref|ZP_03043536.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E22]
 gi|193068230|ref|ZP_03049194.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E110019]
 gi|194429430|ref|ZP_03061953.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B171]
 gi|209919810|ref|YP_002293894.1| histidine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218695909|ref|YP_002403576.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli 55989]
 gi|256017532|ref|ZP_05431397.1| lysine/arginine/ornithine transporter subunit [Shigella sp. D9]
 gi|260844897|ref|YP_003222675.1| lysine/arginine/ornithine transporter subunit ArgT,
           periplasmic-binding component [Escherichia coli O103:H2
           str. 12009]
 gi|260856354|ref|YP_003230245.1| lysine/arginine/ornithine transporter subunit ArgT,
           periplasmic-binding component [Escherichia coli O26:H11
           str. 11368]
 gi|260869032|ref|YP_003235434.1| lysine/arginine/ornithine transporter subunit ArgT,
           periplasmic-binding component [Escherichia coli O111:H-
           str. 11128]
 gi|293446647|ref|ZP_06663069.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B088]
 gi|300818087|ref|ZP_07098299.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 107-1]
 gi|300822184|ref|ZP_07102326.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 119-7]
 gi|300903700|ref|ZP_07121615.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 84-1]
 gi|300918518|ref|ZP_07135111.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 115-1]
 gi|300924579|ref|ZP_07140541.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 182-1]
 gi|301303228|ref|ZP_07209353.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 124-1]
 gi|301328811|ref|ZP_07221856.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 78-1]
 gi|307311129|ref|ZP_07590773.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|331669009|ref|ZP_08369857.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA271]
 gi|331678256|ref|ZP_08378931.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli H591]
 gi|331683981|ref|ZP_08384577.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli H299]
 gi|187427161|gb|ACD06435.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           boydii CDC 3083-94]
 gi|192932107|gb|EDV84706.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E22]
 gi|192958509|gb|EDV88948.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E110019]
 gi|194412491|gb|EDX28790.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B171]
 gi|195183049|dbj|BAG66609.1| lysine/arginine/ornithine transporter subunit [Escherichia coli
           O111:H-]
 gi|209913069|dbj|BAG78143.1| histidine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218352641|emb|CAU98422.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli 55989]
 gi|257755003|dbj|BAI26505.1| lysine/arginine/ornithine transporter subunit ArgT,
           periplasmic-binding component [Escherichia coli O26:H11
           str. 11368]
 gi|257760044|dbj|BAI31541.1| lysine/arginine/ornithine transporter subunit ArgT,
           periplasmic-binding component [Escherichia coli O103:H2
           str. 12009]
 gi|257765388|dbj|BAI36883.1| lysine/arginine/ornithine transporter subunit ArgT,
           periplasmic-binding component [Escherichia coli O111:H-
           str. 11128]
 gi|291323477|gb|EFE62905.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B088]
 gi|300404282|gb|EFJ87820.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 84-1]
 gi|300414332|gb|EFJ97642.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 115-1]
 gi|300419210|gb|EFK02521.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 182-1]
 gi|300525314|gb|EFK46383.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 119-7]
 gi|300529231|gb|EFK50293.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 107-1]
 gi|300841402|gb|EFK69162.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 124-1]
 gi|300844811|gb|EFK72571.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 78-1]
 gi|306908635|gb|EFN39132.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|315061603|gb|ADT75930.1| lysine/arginine/ornithine transporter subunit [Escherichia coli W]
 gi|315255247|gb|EFU35215.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 85-1]
 gi|320183766|gb|EFW58600.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Shigella flexneri CDC 796-83]
 gi|320199901|gb|EFW74490.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli EC4100B]
 gi|323156461|gb|EFZ42616.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli EPECa14]
 gi|323161647|gb|EFZ47532.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E128010]
 gi|323176764|gb|EFZ62354.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 1180]
 gi|323184370|gb|EFZ69746.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 1357]
 gi|323377816|gb|ADX50084.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli KO11]
 gi|323944823|gb|EGB40889.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H120]
 gi|324020832|gb|EGB90051.1| lysine/arginine/ornithine ABC transporter [Escherichia coli MS
           117-3]
 gi|324117812|gb|EGC11711.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1167]
 gi|331064203|gb|EGI36114.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli TA271]
 gi|331074716|gb|EGI46036.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli H591]
 gi|331078933|gb|EGI50135.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli H299]
 gi|332093390|gb|EGI98448.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           boydii 3594-74]
 gi|332100892|gb|EGJ04238.1| lysine/arginine/ornithine transporter subunit [Shigella sp. D9]
          Length = 260

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
          Length = 722

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 80/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F ++ S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISSTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++     +   +   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A GD+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|301630377|ref|XP_002944298.1| PREDICTED: histidine-binding periplasmic protein-like [Xenopus
           (Silurana) tropicalis]
          Length = 253

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 13/220 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           + G+N     F    A G+  GFDVD   AL + I     K  ++          LQ+K+
Sbjct: 23  RVGLNPAYEPFESKTATGEIVGFDVDIINALCAQI---QRKCVFVESEWDSIIPGLQAKK 79

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D++  +   T  R     + F    Y      ++ K       + L G  I V  G+T 
Sbjct: 80  YDVIVSSMSITPERARV--VDFSNRYYKTPSAIVVKKGTKYDGPASLKGMKIGVLKGSTQ 137

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E       K      + + ++   ++    +A R D    D   ++   L      +   
Sbjct: 138 EKWALGELKPAG--VNVVPYQSQNQVYLDIKAGRLDGTVADKVEVHGGFLRKPEGQDFGY 195

Query: 217 L-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           +             +  A+ +G  E    ++    A + A
Sbjct: 196 VGADQYDPKYYGEGIGIALRKGQGELKKQLNDAI-ATIRA 234


>gi|327193816|gb|EGE60693.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CNPAF512]
          Length = 321

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 81/233 (34%), Gaps = 13/233 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L  I     L+C     +  FA       +  GFDVD C A++  +          P+
Sbjct: 67  DQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCGAIAKELGVKAE---IKPV 123

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + + R   ++  ++DI   N  +TL R   +   F    Y   +  I+       + +  
Sbjct: 124 SVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADDAGKTKADY 181

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +G  I    G+T+E+++         K  P+ F+       A +  +      +      
Sbjct: 182 AGQRIASTKGSTSEMSI------KLNKSEPLTFQDTASAYLAVQQGKARGMVANTMTTTK 235

Query: 204 LKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +  +  E  ++ + +   P+   + +        V+   + +  + E+ 
Sbjct: 236 FVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPALTAKVNEILHKLDESGEIN 288


>gi|323967751|gb|EGB63163.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli M863]
 gi|323977489|gb|EGB72575.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TW10509]
 gi|327252581|gb|EGE64240.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli STEC_7v]
          Length = 260

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    D +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|73541284|ref|YP_295804.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72118697|gb|AAZ60960.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 252

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 19/244 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K     +  LI L F + +              L+   +        +  NG   GFDV
Sbjct: 5   RKCLMAGLTALIGLTFGAAAHAED-------NAVLRVATDATFPPMEFI-ENGKRTGFDV 56

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++  +     ++++  ++ K     L S++ D+       T  R   +     P 
Sbjct: 57  ELVEAMAKTMGK---RVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFT-EPY 112

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   +      I + + L+G  + VQ GT +   L D +     +   +  E+ +E
Sbjct: 113 YTGGLVALVKSGNTTIHAPADLNGKKVSVQVGTKSVSFLRDTYP----QVQRVEVEKNQE 168

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +       R DA      A      T        ++   ++      A+ +   E    +
Sbjct: 169 MFNLVEIGRADAAVTGKPAAMQYVKTRGG---LRMVEQPLTTEEYGMAVRKDMPELTRAL 225

Query: 242 SWTH 245
           +   
Sbjct: 226 NAAL 229


>gi|238795810|ref|ZP_04639323.1| Arginine-binding periplasmic protein 2 [Yersinia mollaretii ATCC
           43969]
 gi|238720273|gb|EEQ12076.1| Arginine-binding periplasmic protein 2 [Yersinia mollaretii ATCC
           43969]
          Length = 243

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I  L  + F++ +              ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATI--LSGMVFSATAAE-----------TIRFAASATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +T   
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNKAIDAV 227


>gi|295112703|emb|CBL31340.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Enterococcus sp. 7L76]
          Length = 190

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 19/184 (10%)

Query: 1   MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M K   +   +  L++                 ++ S     +  +KK G +K G+   +
Sbjct: 1   MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60

Query: 45  VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F  +  +    +G + D  R ++  I      ++++ + AK R   L + ++D++   
Sbjct: 61  PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y D  GF++ K+   SS+  L G +I V    TT+  L   
Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178

Query: 164 FKAH 167
            K  
Sbjct: 179 RKRK 182


>gi|224826830|ref|ZP_03699930.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
 gi|224601050|gb|EEG07233.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
          Length = 256

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 24/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L      +           K    ++ G++     F    A+G   GFD
Sbjct: 1   MKKLALTVCLALASSGVFA-----------KDWKVIRFGVDASYAPFESKAADGKLTGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++  +      AL++K+ D +      T  R   +   F  
Sbjct: 50  IDLGNAICEKL---KAKCVWVENDFDGMIPALKAKKFDGILSALSVTEKRAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   +  +   L G  I V+ G+T E     +++      + + ++  
Sbjct: 105 KMYNSPVRMIAKKGAPLQPTPESLRGKRIGVEQGSTQEAYAKAHWEPKG--VNVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   + R DA   D        L   R +        ++ + +     A  + + D
Sbjct: 163 DLVLSDLVSGRLDASLQDAVQADVGFLRTARGNGFAFAGPEVNDAKILGTGTAIGLRKDD 222

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 223 ADLRQQINQALAAI 236


>gi|110642514|ref|YP_670244.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 536]
 gi|191169972|ref|ZP_03031526.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli F11]
 gi|218690470|ref|YP_002398682.1| lysine/arginine/ornithine ABC transporter subunit
           periplasmic-binding protein [Escherichia coli ED1a]
 gi|227887368|ref|ZP_04005173.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Escherichia coli 83972]
 gi|300980888|ref|ZP_07175234.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 200-1]
 gi|301049068|ref|ZP_07196052.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 185-1]
 gi|306814578|ref|ZP_07448740.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli NC101]
 gi|331647965|ref|ZP_08349057.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli M605]
 gi|110344106|gb|ABG70343.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 536]
 gi|190909488|gb|EDV69073.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli F11]
 gi|218428034|emb|CAR08805.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia coli ED1a]
 gi|227835718|gb|EEJ46184.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Escherichia coli 83972]
 gi|281179396|dbj|BAI55726.1| histidine ABC transporter substrate binding component [Escherichia
           coli SE15]
 gi|300299115|gb|EFJ55500.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 185-1]
 gi|300307701|gb|EFJ62221.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 200-1]
 gi|305851972|gb|EFM52424.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli NC101]
 gi|307554371|gb|ADN47146.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli ABU 83972]
 gi|324006680|gb|EGB75899.1| lysine/arginine/ornithine ABC transporter [Escherichia coli MS
           57-2]
 gi|324013188|gb|EGB82407.1| lysine/arginine/ornithine ABC transporter [Escherichia coli MS
           60-1]
 gi|330912133|gb|EGH40643.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli AA86]
 gi|331043689|gb|EGI15827.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli M605]
          Length = 260

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|288555161|ref|YP_003427096.1| glutamine ABC transporter substrate-binding protein [Bacillus
           pseudofirmus OF4]
 gi|288546321|gb|ADC50204.1| glutamine ABC transporter substrate-binding protein [Bacillus
           pseudofirmus OF4]
          Length = 267

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 22/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK--------KRGFLKCGINTGLVGFAEVKA 52
           M K ++ S++   +L   +   +     +          +R       +   V F  +  
Sbjct: 1   MKKSYWKSVVFGGLLLVATACGSEDTSSEADNGAAAEDGERESYVVATDNAYVPFEFLDE 60

Query: 53  -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+  GFD+D   A++     D   I++  +        + S + DI       T  R+
Sbjct: 61  ETGELVGFDIDLMTAIAEEAGFD---IEFEAMEFDGIVAGIGSGRFDIGIAGMTITEERK 117

Query: 112 ISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
               + F    Y  G    +      I+SV  L G  +  + G+T+E  + +     N  
Sbjct: 118 E--NIDFSQPYYDAGLIVAVHADNDEINSVDDLDGKVVATRTGSTSETYIRE-----NTG 170

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             P  F ++ E        R DA   DI        + +   +   + + ++      A 
Sbjct: 171 GTPEAFPQITEAYQNVIQGRADAVIYDIP-NVQYYASTEGGGQLKTVGEALTGEEYGIAF 229

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            +G +E  +I       +  
Sbjct: 230 PKG-SELRDIADEALTTLKE 248


>gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis HIP11704]
 gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis HIP11704]
 gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
          Length = 722

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F +  S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++     +   +   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLNAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKS--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A GD+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|111657052|ref|ZP_01407848.1| hypothetical protein SpneT_02001717 [Streptococcus pneumoniae
           TIGR4]
          Length = 274

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 13/248 (5%)

Query: 5   FFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
             V +  +  LF  +       T+       +    +  G ++  V     + +G + GF
Sbjct: 1   MLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGSYAGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+          + + P++   +   L    ID++      T  R     +AF 
Sbjct: 61  DIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REKVAFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVF 176
                + Q  +  K  GI++   ++G ++  QAG++         +             +
Sbjct: 116 NSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKEANQY 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E     +  R D    D              +++ +    +     A    + DT 
Sbjct: 176 QTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTN 235

Query: 237 WYNIVSWT 244
               ++  
Sbjct: 236 LVKKINEA 243


>gi|306836971|ref|ZP_07469921.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium accolens ATCC 49726]
 gi|304567154|gb|EFM42769.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium accolens ATCC 49726]
          Length = 339

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 84/223 (37%), Gaps = 15/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI KRG L  G++      +   A +GD +GF+VD    ++  IF DP+K+ +  + + +
Sbjct: 89  DIVKRGRLIVGVDRSNNLLSYRDAASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESSD 148

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL +  +DI+ R    +  RE  +   F           ++    G++S+    G  
Sbjct: 149 RTAALDNGTVDIIVRTMTISPEREKEVA--FSIPYMTTQTRMLVLTSSGMNSIDDADGKR 206

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C   G+T      D  +    +   ++     +   A + ++ D    D + L  +   
Sbjct: 207 LCGVRGSTAL----DTIRERAPRSDILITRSWGDCLMALQLNQADGVVVDDALLSGMAAQ 262

Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245
           +       I+ + +       A                V+ T 
Sbjct: 263 DS---YTSIVGEPLKTENYGVAARLPNKDHDTRPLLRQVNSTL 302


>gi|253689166|ref|YP_003018356.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755744|gb|ACT13820.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 259

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 96/279 (34%), Gaps = 29/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V  L LI+          S + +I K   +K G +     F    A+G+  GFD
Sbjct: 1   MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L G  + V   +T E      ++        + ++  
Sbjct: 107 KLYAANARLIAKKGASIEPTLASLGGKRVGVLQASTQEAFANANWQPKG--VEVVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R DA   D  A     L  D   ++      +             + + D
Sbjct: 165 DLIYADLTAGRIDAAFQDEVAGSEGFLKLDMGKDYAFAGPAVKDDKFFGVGTGMGLRKAD 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE    +          EE+       +  +K   + DV
Sbjct: 225 TELKAALDKAF------EEMRKDGT-YDTFAKKYFDFDV 256


>gi|13474012|ref|NP_105580.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
 gi|14024764|dbj|BAB51366.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
          Length = 257

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 18/250 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F   +    +  T  S  AS          L+ G       F    A+G   GFD+D 
Sbjct: 2   RLFGRFVLAASVALTLASGAASAQDK------LRIGTEGAYPPFNYANADGTLGGFDIDL 55

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +AL + +    ++ ++   +      ALQ+ + D +      T+  E +  + F    Y
Sbjct: 56  GKALCAEM---KAECEFTVQDFDGSIPALQAGKFDAIIN---ITITPERAEKVEFTHKYY 109

Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                  + K   I  +S   L G ++ VQ  T        + +          +   ++
Sbjct: 110 QTPPAITVPKDSTIAGTSPDDLKGKALGVQTATIH----QKFAEQKYSGSTVKAYPTGDD 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R DA       L       D     ++       +   P +     +    +
Sbjct: 166 ARTDMANGRLDAMMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKEL 225

Query: 242 SWTHYAMVTA 251
           +    A + A
Sbjct: 226 AGKFNAAIDA 235


>gi|108799122|ref|YP_639319.1| extracellular solute-binding protein [Mycobacterium sp. MCS]
 gi|119868237|ref|YP_938189.1| extracellular solute-binding protein [Mycobacterium sp. KMS]
 gi|126434728|ref|YP_001070419.1| extracellular solute-binding protein [Mycobacterium sp. JLS]
 gi|108769541|gb|ABG08263.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. MCS]
 gi|119694326|gb|ABL91399.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. KMS]
 gi|126234528|gb|ABN97928.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 275

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 16/246 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G      G      +G   GFDVD    ++  +   P +I++    + +R   +Q+
Sbjct: 38  TIVIGTKFDQPGLGLRNPDGSMSGFDVDVATYVAGELGYTPEQIEWKESPSGQRETLIQN 97

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQA 152
            Q+D +      T  R+    + F       GQ  ++       + +    +   +C  +
Sbjct: 98  DQVDYIVATYSITDSRKE--KVDFAGPYLITGQSLLVRNDNTDITGAASLANNKRLCSVS 155

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T    + D +           ++       A +    DA T D   L         P 
Sbjct: 156 GSTPAQKIKDEYP----GVQLQQYDTYSACIEALKNGAIDAVTTDEVILAGYAAQ--TPG 209

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNINQVSK 266
              I+ D  S+      + + D+E    ++          A   A +  +    I   + 
Sbjct: 210 AFKIVGDTFSEERYGVGLKKDDSELRAKINAAIEKMESSGAWKEAFDKNLGPAGITAPTP 269

Query: 267 DTTNPD 272
              + +
Sbjct: 270 PPVDSN 275


>gi|227114003|ref|ZP_03827659.1| putative cystine-binding periplasmic protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 255

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   L    L  TS   +A  L  IK  G +K G       +     +G   GFD
Sbjct: 1   MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKFGTEGTYAPYTYHDKSGQLVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +      I+            + +K+ D +      T  R   +   F  
Sbjct: 59  VDIGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKER--QVKYDFSK 113

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++      +   S L G     Q+ T+     A  + A       +  +  
Sbjct: 114 PYIDSKAVLVVRGDNTTLKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----DIVPTDGF 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K          I        P A  + +       
Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKNQAPLVE 226

Query: 240 IVSWTH 245
            ++   
Sbjct: 227 ALNKAL 232


>gi|239816640|ref|YP_002945550.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239803217|gb|ACS20284.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 266

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 88/247 (35%), Gaps = 10/247 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   +++  + +L     +   + L ++ K   +K  + T    +  V  N   +G DV
Sbjct: 7   KRHLSLALASVAMLAAAGGAQAQNALDNVLKAKTIKIAVPTDYPPYGSVDRNMKPQGLDV 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    +++ +      ++ +P+ +  R   LQ+++ D++         RE    + F   
Sbjct: 67  EMAELIAAKLGVK---VELVPVTSANRIPYLQTRKADLVISTLGKNPEREKV--IDFSAA 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                Q     K   ++S + ++G ++ V  G   +  L      +        FE    
Sbjct: 122 YAPFFQAVYAAKSMKLTSFADMAGKTVAVTRGAMEDQELNKVAPPN---VDYRRFEDNNA 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA+ A +        SA  A  +    P        ++  SP    + +G+T     V
Sbjct: 179 TIAAFVAGQTQTLAT--SAAVAGDMLAKNPKVSAEFKLLLKDSPCFVGVAKGETALKTKV 236

Query: 242 SWTHYAM 248
           +    A 
Sbjct: 237 NEIIAAA 243


>gi|320155821|ref|YP_004188200.1| amino acid ABC transporterperiplasmic amino acid-binding protein
           [Vibrio vulnificus MO6-24/O]
 gi|319931133|gb|ADV85997.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus MO6-24/O]
          Length = 256

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 80/226 (35%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  +A+G  KGFDVD   AL   +     + + +  +
Sbjct: 16  SGIAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEM---KVQCKIVAQD 72

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K  G++    LS
Sbjct: 73  WDGIIPSLLARKYDAIIAAMSITEERK--QKVDFTGKYALIPNKFIAKKGAGLNFDK-LS 129

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +  +      + +   +E        R  A  GD SAL   
Sbjct: 130 GVKIGVQRATTHDKYLTDNYGKN---VDIVRYGSFDEAYLDLANGRIAAVLGDASALEEG 186

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 187 VLNKAGGEGYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKQLDAAI 232


>gi|227327250|ref|ZP_03831274.1| histidine-binding periplasmic protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 259

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 97/279 (34%), Gaps = 29/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V  L LI+          S + +I K   +K G +     F    A+G+  GFD
Sbjct: 1   MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L G  + V   +T E      ++   +    + ++  
Sbjct: 107 KLYAANSRLIAKKGASIEPTLASLGGKRVGVLQASTQEAFANANWQPKGVD--VVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R DA   D  A     L  D   E+      +             + + D
Sbjct: 165 DLIYADLAAGRIDAAFQDEVAASEGFLKLDAGKEYEFAGPAVKDDKFFGVGTGMGLRKAD 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE    +          EE+       +  +K   + DV
Sbjct: 225 TELKAALDKAF------EEMRKDGT-YDTFAKKYFDFDV 256


>gi|301300408|ref|ZP_07206610.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852010|gb|EFK79692.1| bacterial extracellular solute-binding protein, family 3
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 291

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 17/255 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAEVK 51
           K     I CL+       +         +  G               G++   V     +
Sbjct: 8   KKIVKIITCLLAFLIVGATLAGCTNVRKRANGQDNWKKIEKKKKVVIGLDDSFVPMGFRE 67

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFDVD  R +      D   + +  ++   +   L++  ID++         R+
Sbjct: 68  KDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPERK 124

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMK 170
            ++   F      + Q  +  KK+ +     + G ++ +Q+G++  E  ++      N  
Sbjct: 125 KTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKNYV 182

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              + ++          A+R      D             P+ + I          A  +
Sbjct: 183 KETVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAVGM 242

Query: 231 IQGDTEWYNIVSWTH 245
            +GD      ++   
Sbjct: 243 RKGDKTLQKKINMAL 257


>gi|296110977|ref|YP_003621358.1| glutamine ABC transporter, substrate binding protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295832508|gb|ADG40389.1| glutamine ABC transporter, substrate binding protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 288

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 95/252 (37%), Gaps = 19/252 (7%)

Query: 4   DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
               +++ L +++ T+ +     +   L  ++K G +  G+      F  +    G  +G
Sbjct: 15  IVLAAVIVLGLMWATATAKKNEEHQDTLARVEKLGRIVWGVKADTRLFGLMDTKTGISQG 74

Query: 59  FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           FD+D  RA++  I      P   +++P+++  +   +++  ID        T+  E    
Sbjct: 75  FDIDIARAITVQISKQTGVPMSAEFVPVSSSSKMQLIKNTNIDGSVS--TMTITPEREKI 132

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    +  GQ  ++ K  GI S+  ++    +I V  GTT    L  +     M    
Sbjct: 133 IDFTNQYFDAGQSILVKKDSGIRSIKDMNDSKYTIIVVVGTTAATELKKFAPKAKM---- 188

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +       A ++ +  A + D + LY     N    E+ I  +  +  P   A    
Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---EYHIAGEAFTHGPYGIAFDNN 245

Query: 234 DTEWYNIVSWTH 245
                +  +   
Sbjct: 246 QKPMIDETNKAL 257


>gi|292656558|ref|YP_003536455.1| putative glutamine ABC transporter periplasmic substrate-binding
           protein [Haloferax volcanii DS2]
 gi|291371439|gb|ADE03666.1| ABC-type transport system periplasmic substrate-binding protein
           (probable substrate glutamine) [Haloferax volcanii DS2]
          Length = 297

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 72/234 (30%), Gaps = 26/234 (11%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     F      GD  GFDVD   A+           ++ P +      +L +
Sbjct: 58  TITIGSDIPYRPFEYETIEGDLTGFDVDIAEAVFDGQLG--IDYEFKPTSFDSIIPSLNN 115

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
               I+         R  +  + F    +   Q  I+ +   I S   L G ++ VQ GT
Sbjct: 116 NNFRIIMSAMTINDQR--AQEVDFSDPYFTAYQTVIVRQDSDIQSREDLRGTTVGVQKGT 173

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY------------ 202
           T      +  +  + +     +++V     A    +  A   D +               
Sbjct: 174 TGADAALELQEEFDGELELNQYDQVTGAFQALVNGQVVAVINDNTVNAEFVNNQGEGEVR 233

Query: 203 ------ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 A   + +   +++ L    +      A  Q D E+   V+    A+  
Sbjct: 234 FLQGEGAAAESGENAPDYLTL----TVENYGIAFRQDDDEFRQRVNEALAAIKE 283


>gi|118471525|ref|YP_887548.1| amino acid ABC transporter [Mycobacterium smegmatis str. MC2 155]
 gi|118172812|gb|ABK73708.1| ABC-type amino acid transport system, secreted component
           [Mycobacterium smegmatis str. MC2 155]
          Length = 295

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 86/288 (29%), Gaps = 39/288 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN----------------------ASIL-GDIKKRGFLK 37
           M++ F V +     L  ++ ++                       A+ L  DIK  G L 
Sbjct: 1   MWR-FAVVLAASGALTLSACASGEGGGESSPESTQAASGAKVDEIANTLPEDIKSSGKLI 59

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G+N           +G   GFDVD   A+++ +   P    Y   +  +   ++Q    
Sbjct: 60  VGVNIPYAPNEFKDPSGKIVGFDVDLMNAVAATLGLTPE---YREADFAKIIPSIQGGTF 116

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           ++   +   T  RE    + F   TYF        +  G        G  + VQA T  E
Sbjct: 117 NVGMSSFTDTKERE--QSVDFV--TYFSAGSLWAQRVGGGIDPENACGKKVAVQATTVQE 172

Query: 158 -----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
                        A       + F+  +    A    + DA + D      L        
Sbjct: 173 TDELPARSKKCTDAGQPAIEIVPFDGQDAATNAVVLGQVDAMSADSP--VTLYAIKQSNG 230

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           +     ++   +P    + +G       +      ++   E      N
Sbjct: 231 KLEKAGEVFDSAPYGWPVAKGSP-LAQSLQQALQHLIDNGEYEKIAAN 277


>gi|306831677|ref|ZP_07464834.1| amino acid ABC superfamily ATP binding cassette transporter
           periplasmic protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426102|gb|EFM29217.1| amino acid ABC superfamily ATP binding cassette transporter
           periplasmic protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 271

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 16/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K F   IL +I+   ++ S++  +    I+ +G +     +    F     +      
Sbjct: 1   MKKFFRGFILLIIVGSLSACSSSTGVSQSSIQDKGKIVIATESEFAPFEFKTLIDGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++   A++ A+  D     +  ++      ++ S + DI       T  R+     
Sbjct: 61  VGADIELGNAIADALGVDAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AY 115

Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +++  L+G ++  Q G+  E    D           +
Sbjct: 116 DFSDAYYEAENIVIIKKSDEATYTTLESLAGKAVGTQKGSIQENIAKDQLP----DSSLV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    + ++  A   + +        ND      +  +       A A  +G 
Sbjct: 172 SLTSNGEMINELKNNQLQAVVLEKAIAEGYVSQNDDLMIADMTLESSDTDAYAVAFAKGT 231

Query: 235 TE-WYNIVSWTHY 246
            +   + V+    
Sbjct: 232 DQDLIDTVNDVIK 244


>gi|92112667|ref|YP_572595.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91795757|gb|ABE57896.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 261

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 16/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M K    +++    +   + S  +++  +      LK GI+      F    A+G W GF
Sbjct: 1   MIKQLKATLMQATGIVLLALSATSAMADE-----PLKIGISAEPYPPFTYKDADGSWTGF 55

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+  +A+ + +    +  +  P      F AL S +ID++  +   T  R+  +   F 
Sbjct: 56  EVELGQAICAQM---DAACEITPTGWSGIFPALNSGKIDMIMNSLSITEKRKRVIA--FS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              YF    ++  K   +     L G  + VQ  TT                   V+++ 
Sbjct: 111 DPYYFTPSAYVTAKANDMQIPEDLDGKILGVQGSTTNATFARRSLADTG--VELKVYDQQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTE 236
           E+ +    A R DA   D  A+  +  + +        I P D    + +   + Q D  
Sbjct: 169 EQANRDLLAGRVDAILADEIAMTEFVERDSAQDFEIRAIAPRDDAFGNGVGIGLRQEDDA 228

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 229 LRDKLNAAI 237


>gi|71736303|ref|YP_277028.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556856|gb|AAZ36067.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 254

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R+    + F   
Sbjct: 52  EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D            +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDVKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNAALKEIIA 237


>gi|320322170|gb|EFW78266.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 261

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 82/244 (33%), Gaps = 10/244 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +    +A+ L D+  RG LK  +      F  V  +   +G D+D  + L+  +    
Sbjct: 17  MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++  P+N+  R   L + ++D++  +      RE    + F                 
Sbjct: 74  VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            +  ++ L G +I V  G   ++ L+              FE      AAY A +     
Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTGLIA 188

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                + A  ++   P     L   +  SP+   + +G  E    V     A      L 
Sbjct: 189 SGNVVMAA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246

Query: 256 ITQK 259
              +
Sbjct: 247 KASQ 250


>gi|170780722|ref|YP_001709054.1| putative extracellular solute-binding transport protein
           [Clavibacter michiganensis subsp. sepedonicus]
 gi|169155290|emb|CAQ00393.1| putative extracellular solute-binding transport protein
           [Clavibacter michiganensis subsp. sepedonicus]
          Length = 327

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 15/233 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFD 73
             +     A+ L D+K +G L  G       F+  + +G     G+DV+   A++  +  
Sbjct: 84  GTSGTPAAATSLSDVKAKGELVIGTEGTYSPFSFHEGSGSGALTGYDVEVATAVADKLGV 143

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132
            P    +        F  L++ + D+++     T  R+      F           I+  
Sbjct: 144 KP---VFEETQFDGIFAGLEAGRWDVIANQISITDERKTV--YDFSEPYTVSPGVIIVKG 198

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GISS + L G +   Q+ T+    LA    A          E   +     +  R D
Sbjct: 199 SDSGISSFADLEGKTTA-QSLTSNWNELATQSGAK-----VEAVEGFAQAVTLLQQGRVD 252

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A   D              S+  +  +    S  A    +G  +    V    
Sbjct: 253 ATINDR-LTLLDYQKQQGDSDLKVAAETDDPSLSALVFRKGSDDLVAAVDQAL 304


>gi|218458308|ref|ZP_03498399.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli Kim 5]
          Length = 62

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/61 (60%), Positives = 49/61 (80%)

Query: 282 SSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            + IG  LGLT +W Y I++++GNYGE+F+RN+G  S+LKI RG NALWSKGG+ YAPP+
Sbjct: 2   DTKIGTDLGLTNEWAYNIVKNVGNYGEVFERNIGQGSQLKIDRGLNALWSKGGIQYAPPV 61

Query: 342 R 342
           R
Sbjct: 62  R 62


>gi|108801905|ref|YP_642102.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119871057|ref|YP_941009.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108772324|gb|ABG11046.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. MCS]
 gi|119697146|gb|ABL94219.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 489

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 31/268 (11%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  S +      IK  G L+ G       F+   A+G   G+DVD  RA++  I      
Sbjct: 18  SCASADDGSDEPIKSAGVLRVGTEGVYAPFSYHDASGQLVGYDVDVARAVADKIGVRAE- 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
             ++       F AL++ + D+++        R                   +       
Sbjct: 77  --FVETPWDAMFAALEAGRFDVVANEVTINAERRA--KYDLSQPYSVGEGVIVTRADDDS 132

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+++  L+G      A +      ++  +    +   +      +        R D    
Sbjct: 133 ITTLDDLAGKVAAENATS----NWSEVAREAGARVEAVE--GFTQAITLLNQGRVDVVVN 186

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D  A+YA        +   I   +  KS    A  +       +                
Sbjct: 187 DSIAVYAYLAETGD-TSVKIAGTVGEKSEQGFAARKDSGLLPELNRA------------- 232

Query: 257 TQKNINQVSKDTTNPDV-QRFLGIDKSS 283
               ++++  D T  ++ QR+L  + S 
Sbjct: 233 ----LDELRADGTLAEISQRYLKANASG 256


>gi|330448489|ref|ZP_08312137.1| bacterial extracellular solute-binding s, 3 family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492680|dbj|GAA06634.1| bacterial extracellular solute-binding s, 3 family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 270

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 82/245 (33%), Gaps = 9/245 (3%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F V +  L +LF    +F+     L  IK+RG L+ G++T  V +A     G+  G
Sbjct: 1   MKRIFAVLLTALTLLFSVNHAFAAEKGTLEQIKERGTLRVGLST-FVPWAMRDKQGELIG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + ++         ++++P        AL + + D++      T  R  +L + F
Sbjct: 60  FEVDVAKRVAKDAGVK---VEFIPTAWDGIIPALLAGKFDVIIGGMSITPQR--NLSVLF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  G      K+     ++        V              K +  K     F+ 
Sbjct: 115 TTPYSHSGIQLAASKELASDKLTIADYNKRSVTLAVRRGAVTVQTAKKYFPKAKLRQFDD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +           A          + L        +   + +S+     AI QGD    
Sbjct: 175 ESQAFQEVLNGNAQAVLASTPKPEQMALQYKDKL-FIPFKERLSQGSEGFAIRQGDFNLL 233

Query: 239 NIVSW 243
           N  + 
Sbjct: 234 NFFNN 238


>gi|153835764|ref|ZP_01988431.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi HY01]
 gi|148867544|gb|EDL66878.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi HY01]
          Length = 256

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +     K Q +  +
Sbjct: 16  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---KVKCQIVAQD 72

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +     L 
Sbjct: 73  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 129

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 130 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 187 VLNKAGGEAYEFVGPSLTDPKWFGDGFGIAVRKQDKDLTKKLDAAI 232


>gi|329766799|ref|ZP_08258329.1| hypothetical protein HMPREF0428_00026 [Gemella haemolysans M341]
 gi|328839310|gb|EGF88892.1| hypothetical protein HMPREF0428_00026 [Gemella haemolysans M341]
          Length = 273

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 95/259 (36%), Gaps = 20/259 (7%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55
           M K      SI+ ++ L   S S+  + L ++K++  +  G++     +  +     N  
Sbjct: 1   MKKLLLFITSIITVVTLTACSSSSTKNKLQEVKEKNKIVLGVSPDYPPYEFLTTENGNKK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+     +S  +     +++   +       AL + ++D++    + T  R+    
Sbjct: 61  VVGADIYLAEQVSKKLG---VQVEIQQMAFDSLIAALNANKVDMVISGVNPTEERKK--A 115

Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F  + Y     F+++K    I SV+ L    I VQ G+T E    +  K      +  
Sbjct: 116 VDFSEVYYTSKGIFVVNKDSEEIKSVADLKNKKIGVQKGSTYETYAKEQLKM--DDKNIQ 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAI 230
               V  +    +  + DA           K+  ++ ++  I        P    +A A 
Sbjct: 174 ALTDVPSLLQDLKNKKIDAVLIPDDV---AKIAMNKYTDIKISTFTADNDPEATGMAIAF 230

Query: 231 IQGDTEWYNIVSWTHYAMV 249
            +G  +    +     A++
Sbjct: 231 KKGKNDSNKELLEQVNAVI 249


>gi|315641165|ref|ZP_07896243.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus italicus DSM 15952]
 gi|315483089|gb|EFU73607.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Enterococcus italicus DSM 15952]
          Length = 283

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 101/292 (34%), Gaps = 31/292 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----------------NASILGDIKKRGFLKCGINTGL 44
           M K     +  + ++   + S+                 ++   +IKK G +K G +   
Sbjct: 1   MKKGLIGLVSVVALMVLGACSSSTTSSSSSSSTKSSSDASNQWSEIKKAGVIKVGTSADF 60

Query: 45  VGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
             F     V       G D+D   A+   +      ++Y+ ++      +L+  Q+DI  
Sbjct: 61  APFEFHTMVNGKDTIVGADIDMMDAIGKELGVK---VEYVDMDFNAVLASLEQGQVDIAV 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELT 159
                T  R+ +    F    +   Q  +++K      +++  L+   +  Q G+  E  
Sbjct: 118 SGISATDERKKT--FDFSVNYFTPEQLVVVNKANVSKYTTLDSLANKRVGAQKGSIQESI 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           + D           +   +V  +    + +  DA   + +   +    ND  +      +
Sbjct: 176 VKDQLP----DSQIVSLAKVPNLMVELKQNSIDAAVVESAVAQSYVAQNDDLAIADAKLE 231

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT-AEELGITQKNINQVSKDTTN 270
                  A A+ +G TE  + ++     M+         QKN +  +++ +N
Sbjct: 232 TAEGDAYAIAMPKGSTELADKINSALEKMIADGTIKEYVQKNTDLANENASN 283


>gi|227893084|ref|ZP_04010889.1| glutamine-binding protein precursor [Lactobacillus ultunensis DSM
           16047]
 gi|227865062|gb|EEJ72483.1| glutamine-binding protein precursor [Lactobacillus ultunensis DSM
           16047]
          Length = 272

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 83/236 (35%), Gaps = 10/236 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
                    ++   +K+   +  GI      F       G  +GF+ D  +AL+  I   
Sbjct: 21  SACGKPGKQNVYQKVKENNEIVWGIRADTRLFGLTNVKTGHIEGFETDLAKALTKQILGK 80

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +  ++   A  R   L++  +D +      T  R     + F    +  G   ++   
Sbjct: 81  KGRASFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFTKPYFPAGSSLLVPNN 138

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I SV  L+  ++    GTT    +             + ++   +  +A +AH+    
Sbjct: 139 SKIKSVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQYDDYGQAMSALKAHQGVTL 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           T D   L  +    + P  + ++  + S +P   A+ +G TE  + ++     +  
Sbjct: 195 TTDNGLLAGIAQ--ENPG-YKLVGGVYSDAPYGIAVNKGQTEMADHINEALKELEE 247


>gi|291448221|ref|ZP_06587611.1| glutamate binding periplasmic protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351168|gb|EFE78072.1| glutamate binding periplasmic protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 299

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 10/232 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
             T    ++ +    K+RG L  G             +  +  GFD++  + +++ +   
Sbjct: 43  AATGVDLDSPVFKKAKERGKLVIGAKADQPYLGFEDQSTKERSGFDIELAKMVAADLGFS 102

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +I++  +++  R  A+   Q+D           R+  +G  F    Y  G   ++ K 
Sbjct: 103 EKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVG--FAGPYYKAGADLLVRKD 160

Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+    + G  +C   G+T    +             +   +  +        + DA
Sbjct: 161 ETAITGKESVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLLTKQVDA 216

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            T D S L           +  ++    +  P    + + D      +S + 
Sbjct: 217 VTTDDSILKGYAAA--NKGKLKVVGKPFTDEPYGIGLNKDDKVLREAISKSL 266


>gi|90962036|ref|YP_535952.1| polar amino acid ABC transporter substrate-binding protein
           [Lactobacillus salivarius UCC118]
 gi|90821230|gb|ABD99869.1| Polar amino acid ABC transporter, substrate binding protein
           [Lactobacillus salivarius UCC118]
          Length = 285

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 81/257 (31%), Gaps = 18/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAE 49
           M K   +    L  L   +     + +   +  G               G++   V    
Sbjct: 1   MKKIVKIITCLLAFLIVGATLAGCTNVRK-RANGQDNWKKIEKKKKVVIGLDDSFVPMGF 59

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            + +G   GFDVD  R +      D   + +  ++   +   L++  ID++         
Sbjct: 60  REKDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHN 168
           R+ ++   F      + Q  +  KK+ +     + G ++ +Q+G++  E  ++      N
Sbjct: 117 RKKTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKN 174

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + ++          A+R      D             P+ + I          A 
Sbjct: 175 YVKEAVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAV 234

Query: 229 AIIQGDTEWYNIVSWTH 245
            + +GD      ++   
Sbjct: 235 GMRKGDKTLQKKINMAL 251


>gi|260769856|ref|ZP_05878789.1| hypothetical amino acid ABC transporter amino acid-binding protein
           [Vibrio furnissii CIP 102972]
 gi|260615194|gb|EEX40380.1| hypothetical amino acid ABC transporter amino acid-binding protein
           [Vibrio furnissii CIP 102972]
 gi|315182148|gb|ADT89061.1| hypothetical amino acid ABC transporter, periplasmic
           aminoacid-binding protein [Vibrio furnissii NCTC 11218]
          Length = 257

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 26/251 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V + C+  LF T+ S              ++   +     F    + G+  GFD
Sbjct: 1   MKK-LAVGLACVATLFCTAVSA-----------KEVRLASDFTYPPFNYKNSAGEPVGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL      D     ++  +      +L +++ D++  +   T  R+    + F  
Sbjct: 49  IEIADALCQEAKLD---CTWVAQSWDALIPSLLARKSDVIMASMRITDDRKK--KVLFTH 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+  K    +     L+G  I VQ GT  +  + D F A         +   
Sbjct: 104 KYYQTPARFVTRKSADFTLDKAGLTGKVIGVQQGTIHDRYVTDKFGA---VADIKRYTGQ 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E+    +  R DA  G+   L    L      +     D ++         A A+ + D
Sbjct: 161 DEVYIDLQNGRLDATFGNADQLSLAFLDKADGQDFEFKGDAVTDKAYIGEGTALALRKQD 220

Query: 235 TEWYNIVSWTH 245
                 ++   
Sbjct: 221 QALAEKLNQAI 231


>gi|197335081|ref|YP_002156067.1| cyclohexadienyl dehydratase [Vibrio fischeri MJ11]
 gi|197316571|gb|ACH66018.1| cyclohexadienyl dehydratase [Vibrio fischeri MJ11]
          Length = 254

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 100/268 (37%), Gaps = 17/268 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K       C+ +LF  SF+ +A  L +I++ G ++ G       F+       + G+D
Sbjct: 2   MKKKLL----CISVLFAASFTAHADRLDEIQEAGIIRVGTTGDYKPFSSFDGK-QFSGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +     K++ +  + K     L + + DI        + R++    +   
Sbjct: 57  IDVAKYIAEQL---DVKLELVQTSWKNLIPDLNADKYDIAMGGITRKIQRQLHAEQSQGY 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +T+         K +  +++ +++ +S  +         +  +   H        ++   
Sbjct: 114 MTFGKCFLVAKGKAETYNTIDKVNKSSTRLGINIGGTNEI--FADTHLQSATFTRYKNNL 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + D    +       + T+ R  E     D  +KS     + +G+ E  N 
Sbjct: 172 DVPQAVATGKVDVMVTETPEALYYQATDKR-LEAARCDDPFTKSQFGYLVPKGEQELLNA 230

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT 268
           V++        +E+ +   +   + K+ 
Sbjct: 231 VNFIM------DEMKLKGVDKELMKKNA 252


>gi|253578612|ref|ZP_04855884.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850930|gb|EES78888.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 280

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 9/226 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G +     F     NG++ GFD+D  + +   +  +  K    P+N   + + 
Sbjct: 12  DSKTLTVGFDAQYPPFGYKDDNGEYVGFDLDLAQEVCDNLGWELVK---KPINWDSKDME 68

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S  ID +          +      +      + Q  ++    GI  +  L+G ++ VQ
Sbjct: 69  LNSGSIDCIWNGFTINGRED---DYTWSNPYLNNEQVMVVAADSGIEKLDDLAGKNVVVQ 125

Query: 152 AGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           A +     L   D                         +   DA   DI          +
Sbjct: 126 AASAALDALNSDDNKDLTASFASLTENPDYNTAFMNLDSGAADAIAVDIGVAKYQLSQRE 185

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +VIL + I          +G+ E  + V      +  A E+ 
Sbjct: 186 EGK-YVILDEPIQSEEYGIGFKKGNDELKDTVWEEVLKLYDAGEVD 230


>gi|49083417|gb|AAT51027.1| PA1260 [synthetic construct]
          Length = 274

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L DI + G L+C +           A  +  GFDVD+C  L+ A+    
Sbjct: 17  CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       +R  AL S + D++  +T  TL R  ++G+      +   +  +  +  
Sbjct: 77  EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPHFAFVKVVLTREDT 131

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194
           GI+S   L G  +   AGT   L L    KA    K     ++   +   A      DA 
Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +   +   +       +          +A    + +    N ++    
Sbjct: 192 VVSSTVAASWIKSGKYKGLEIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243


>gi|227325923|ref|ZP_03829947.1| glutamine ABC transporter periplasmic protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
 gi|253687972|ref|YP_003017162.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754550|gb|ACT12626.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 248

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 81/247 (32%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  L ++   S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSLLKASLAALTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K    P++      ALQ++ ID+       T  R+    + F  
Sbjct: 51  IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I     L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYNSGLLVMVKADNNDIKGEQDLAGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + D I       A  +G  E   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGSNELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|170767489|ref|ZP_02901942.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           albertii TW07627]
 gi|170123823|gb|EDS92754.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           albertii TW07627]
          Length = 260

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 95/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++    + S+ A++   +      + G +T    F+   A GD+ GFD
Sbjct: 1   MKKSIL--ALSLLVGISAAASSYAALPEAV------RIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    D +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGID--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|227833320|ref|YP_002835027.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium aurimucosum ATCC 700975]
 gi|262184304|ref|ZP_06043725.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium aurimucosum ATCC 700975]
 gi|227454336|gb|ACP33089.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium aurimucosum ATCC 700975]
          Length = 294

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 84/253 (33%), Gaps = 16/253 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDD 74
           S S    +L  I + G +  G      G    + +G   G DVD        ++     +
Sbjct: 31  SASGGDGLLASI-ESGSVTLGTKFDQPGLGLREGDGSMTGLDVDVATYVVNHIAKDKGWE 89

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +I++    + +R   +++ ++D+++        R     + F        Q  +    
Sbjct: 90  EPEIEWRETPSAQRETLIENGEVDLIAATYSINASRAE--KVNFAGPYLITHQALLTQND 147

Query: 135 K-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+ +  L G  +C   G+T    + +   +         ++       A      DA
Sbjct: 148 NKDITGLEGLDGKILCSVTGSTPAQKVKEALPS----VQLQEYDTYSSCVEALSQGNVDA 203

Query: 194 YTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            T D + L      N    + V L       +       + + D E  + ++     + +
Sbjct: 204 MTTDATILNGYAAQNPGKFQVVELEKDGKPFTDEYYGVGLKKDDQEATDAINKALEELHS 263

Query: 251 AEELG-ITQKNIN 262
           + E   +  KN++
Sbjct: 264 SGEFDKLVSKNLD 276


>gi|50121692|ref|YP_050859.1| glutamine ABC transporter periplasmic protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612218|emb|CAG75668.1| glutamine-binding periplasmic protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 248

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 81/247 (32%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  L ++   S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSLLKASLAALTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K    P++      ALQ++ ID+       T  R+    + F  
Sbjct: 51  IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I     L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYDSGLLVMVKADNNDIKGEQDLAGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + D I       A  +G  E   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGSNELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|257461157|ref|ZP_05626255.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257441531|gb|EEV16676.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 267

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 100/246 (40%), Gaps = 22/246 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F  IL    LF       A+ L +I+  G ++ G+  G   F+E+ + G ++GF+++
Sbjct: 2   KLLFTLILLCAGLF-------ANTLQEIRNSGVIRVGVRDGRPPFSEI-SGGKFEGFEIE 53

Query: 63  FCRALSSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
              A++ AIF     ++Q++ L+A +R   L + ++D+++        R+    + F   
Sbjct: 54  LANAIAKAIFGAKQGEVQFVSLSAADRVSYLVNNKVDMVAATFVIDSARKNH--VDFSMP 111

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +    G +  K   I  +S+L    +  + GTT +  L      +         +   E
Sbjct: 112 YFSTNLGVLTRKADAIKDISRLRDMRLITEEGTTVDNYLKKEKFTNAS-----YCKSTSE 166

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWYN 239
             A  R  + D Y      + A  +      + + +P      P  +   + +G+ E  +
Sbjct: 167 CYAMIRDGKADGYVNLNITVLAYAVV----DDTLEVPFQNFGKPDFIGIGVQKGNKELLD 222

Query: 240 IVSWTH 245
            ++   
Sbjct: 223 FINAEL 228


>gi|257093093|ref|YP_003166734.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045617|gb|ACV34805.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 257

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 90/244 (36%), Gaps = 15/244 (6%)

Query: 4   DFFVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            F   +L  +  +    +  + A     IK+ G L      G   F          GF+V
Sbjct: 2   RFLARLLSAVIPLSLMIAGPSEAREWNAIKQSGTLVAATEGGFQPFNYYDGP-KLTGFEV 60

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++  +     K+++  +    +  AL+  + D    +  +T  R     + F   
Sbjct: 61  DLAEAIAKKLG---LKLEWRVVPFDGQIAALKQDRFDFAIASHGYTEERAK--SVDFANP 115

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y  G     HK   + +V  L+G ++ VQ  T+     AD  K          ++   E
Sbjct: 116 HYCTGGQIAAHKDGPL-TVVALNGKTVGVQLATSY----ADAAKKVKGIKTIKTYKGDPE 170

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA RA++ DA+  D   + A    +  P   +   +++    ++  + + + E  + +
Sbjct: 171 AFAALRANKVDAWISDKFTVKATL--DKNPDAGITGGELVFVERVSMILRKNNKELADKL 228

Query: 242 SWTH 245
           +   
Sbjct: 229 NQAL 232


>gi|153833182|ref|ZP_01985849.1| arginine-binding periplasmic protein 1 [Vibrio harveyi HY01]
 gi|148870612|gb|EDL69520.1| arginine-binding periplasmic protein 1 [Vibrio harveyi HY01]
          Length = 247

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 85/258 (32%), Gaps = 21/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L      + +              +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K+  ++    L G  + VQ G+T +  L +           + +   +
Sbjct: 107 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221

Query: 239 NIVSWTHYAMVTAEELGI 256
           N ++     +    E  +
Sbjct: 222 NKLNTALKTVKANGEYDV 239


>gi|240145777|ref|ZP_04744378.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Roseburia intestinalis L1-82]
 gi|257202109|gb|EEV00394.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Roseburia intestinalis L1-82]
          Length = 284

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 80/276 (28%), Gaps = 37/276 (13%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNASIL------------------------GDIKKRGF 35
           M K     +L  ++     +  +N++                           D  ++  
Sbjct: 1   MKKKVISILLTAVLATGMAACGSNSNTASNSANNTADNAQNTAETSTESTGSADSAEKPV 60

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G+      +     NG   GF+VD   A+   +  D   +Q++         AL + 
Sbjct: 61  LTVGMEGTYAPYTYHDENGTLTGFEVDMANAIGEKMGYD---VQFVETEWDSITAALDAG 117

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
             D++      T  R+      F     +     I+      I+S   ++G        +
Sbjct: 118 NFDVVMNQVTITDERKE--KFDFSTPYIYSKPVLIVAADNTDINSFEDINGKKAAEGLTS 175

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                 +D  +++      +  ++         +   D    D       K         
Sbjct: 176 ----NFSDIARSYG--AEIVGQDKFALAMECVLSGEADCAINDELTYAYWKQQKGGEDST 229

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            I+ +  + +  A  + +G+ E    ++     ++ 
Sbjct: 230 KIVAESDNVNSSAIMVKKGNDELIEKLNSAIDELLA 265


>gi|323339543|ref|ZP_08079818.1| glutamate ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Lactobacillus ruminis ATCC
           25644]
 gi|323093023|gb|EFZ35620.1| glutamate ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Lactobacillus ruminis ATCC
           25644]
          Length = 273

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 80/268 (29%), Gaps = 22/268 (8%)

Query: 1   MYKDF------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---K 51
           M            ++   I L     S     +  IK +G L  G +     F       
Sbjct: 1   MKNRLAKIFCSLAAVGAAIFLISGCGSKKTGAVDTIKDKGTLVVGTSADYAPFEFPIVKD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              +  G+D+   + ++  +      ++ +          L++K+ID++      T  R 
Sbjct: 61  GKKEIVGYDMMVAQKIADDMGVK---LKIVNTEFPSLISELKNKKIDLIMAGMVSTAERR 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
             +   F    Y      ++ KK      + + L+G  I VQ  TT E       KA   
Sbjct: 118 KVIA--FSKPYYKVYNVVLVQKKDAKNFPTKASLAGKQIGVQQSTTQEAIAKKQLKA--- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--PLA 227
               +   ++  +    +  +      + +       T         +  +  +    + 
Sbjct: 173 -SKLVTESQLTSLTTELKEGKLSGVVCEKAIADNYLATYPDKYAVAKVKLVTPEENKNID 231

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             I + D +    V      +  + +L 
Sbjct: 232 IGIRKDDKDLKKCVDKVLTKLEKSGQLD 259


>gi|170724085|ref|YP_001751773.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169762088|gb|ACA75404.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 250

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 76/235 (32%), Gaps = 20/235 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    ++    + +              L+ GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAATLVFSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 53  DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTDP 107

Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K     +    L G  I  Q  T     L D +          +++  E
Sbjct: 108 YYSNKLQFIAPKNVDFKTDAGYLKGKIIGTQRATLAGTWLEDTY---GSDIDIKLYDTQE 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                  + R D    D    Y    + D  +       ++    +  A+ +GD 
Sbjct: 165 NAYLDLISGRVDGILADKYVQYEWLKSKDGMNFEFKGEPVVDSDKIGIAVRKGDP 219


>gi|21224122|ref|NP_629901.1| glutamate binding protein [Streptomyces coelicolor A3(2)]
 gi|2687341|emb|CAA15882.1| glutamate binding protein [Streptomyces coelicolor A3(2)]
          Length = 278

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 8/218 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  GI     G  +   +G + GFDVD    ++  +     +I++    + +R   LQ
Sbjct: 38  KKITIGIKFDQPGLGQKTPDG-YAGFDVDVATYVAKKLGYTEDQIEWKESKSADRETMLQ 96

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQA 152
              +D ++     T  R  S  + F            I      I S   L+ A +C   
Sbjct: 97  RGDVDFIAATYSITPER--SEKVDFAGPYLLAHQDVLIRADDDKIKSPEDLNDAKLCSVT 154

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T+   + D       K     +          +    DA T D S L      +    
Sbjct: 155 GSTSAQNVKDKLA---PKAQLQKYPTYSACLNGLQTGAIDALTTDDSILAGYAAQSQFKG 211

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +  +    ++       + +G ++    ++    AM T
Sbjct: 212 KFKLGGFKMTNENYGIGVKKG-SDLKAKINDALEAMAT 248


>gi|27365435|ref|NP_760963.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio vulnificus CMCP6]
 gi|37680522|ref|NP_935131.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus YJ016]
 gi|27361582|gb|AAO10490.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus CMCP6]
 gi|37199270|dbj|BAC95102.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus YJ016]
          Length = 258

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 80/226 (35%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  +A+G  KGFDVD   AL   +     + + +  +
Sbjct: 18  SGIAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEM---KVQCKIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K  G++    LS
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERK--QKVDFTGKYALIPNKFIAKKGAGLNFDK-LS 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +  +      + +   +E        R  A  GD SAL   
Sbjct: 132 GVKIGVQRATTHDKYLTDNYGKN---VDIVRYGSFDEAYLDLANGRIAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 189 VLNKAGGEGYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKQLDAAI 234


>gi|294787651|ref|ZP_06752895.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Simonsiella muelleri ATCC 29453]
 gi|294483944|gb|EFG31627.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Simonsiella muelleri ATCC 29453]
          Length = 282

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 102/335 (30%), Gaps = 75/335 (22%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL------GDIKKRGFL---KCGINTGLVGFAEVK 51
           M  +   ++ CL+IL        A+ +        +     L     G +     F    
Sbjct: 6   MKNNIL-ALTCLLILAACGNDAPATQISNNQPVESVSAPKKLERYVVGTDATYPPFDFKD 64

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFD D  +A++    +    I+++P    + F  L      IL+        R 
Sbjct: 65  EHGQLTGFDADLLKAIAD---NQNFSIEFIPTARSQLFPGLNEGYYQILAACLGINAERL 121

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               +       F     +      + +++QL  +S+ VQ  + T   L D    +    
Sbjct: 122 AQSEM--SEPYAFAPNVIMGKTGNNVQTLAQLGNSSVAVQQDSYTHKVLTDSGIKN---- 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAP 228
             I  +   E    + + R D   GD   L      N     P  +  + +      +A 
Sbjct: 176 -IITEKTPYEAYVDFVSGRADYVVGDAGVLNYYHKNNKDTHKPQTYSAVYNKTEDVRVAF 234

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
           A+ +G+TE  N ++                                              
Sbjct: 235 AVKKGNTELINKINE--------------------------------------------- 249

Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
            GL        I+  G Y +++ +  G  + L++P
Sbjct: 250 -GLKN------IKANGTYDKIYAKWFGTDNSLRVP 277


>gi|70733847|ref|YP_257487.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68348146|gb|AAY95752.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 250

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 75/236 (31%), Gaps = 22/236 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   ++    + L F++ +              LK GI      F    A+G   GFD 
Sbjct: 4   YKKILLA--AAVTLAFSASAAAE----------TLKMGIEAAYPPFNNKDASGQVVGFDK 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 52  DIGDALCAKMKVE---CTVVTSDWDGIIPALNAKKFDFLISSLSITDERK--QAVDFTDP 106

Query: 122 TYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y +   FI    K    +  + L G  I  Q  T     L D            +++  
Sbjct: 107 YYSNKLQFIAPKAKTDFKTDKASLKGKIIGAQRATLAGTWLEDNL---GDDITIKLYDTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E       + R DA   D    Y    ++           ++    +  A+ + D 
Sbjct: 164 ENAYLDLTSGRLDAILADKYVNYEWLKSDAGKPYEFKGEPMVESDKIGIAVRKKDP 219


>gi|302519117|ref|ZP_07271459.1| sugar-binding protein [Streptomyces sp. SPB78]
 gi|302428012|gb|EFK99827.1| sugar-binding protein [Streptomyces sp. SPB78]
          Length = 336

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 33  RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           RG L  G++     +         N D +GFD+D   A++  +  DP  +    +    R
Sbjct: 81  RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 140

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGAS 147
             A+    +D++ R    T  R     ++F    +   Q  I+ +   +   +  L+G  
Sbjct: 141 VQAVADHDVDMVVRTMTITCRR--LKDVSFSTPYFRTTQRIIVPRGSSVDGFNASLTGKR 198

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C    +T E  L + FK    K   +      +     +    DA   D +        
Sbjct: 199 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 255

Query: 208 NDRPSEHVILPDIISK-------SPLAPAIIQGDTEWYNIVSWTH 245
           +          +                A+ Q        V+   
Sbjct: 256 DPSLDMQGGPDENNPADRDSPAWEYYGIAMNQDSPRLVARVNKIL 300


>gi|251777721|ref|ZP_04820641.1| amino acid ABC transporter [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082036|gb|EES47926.1| amino acid ABC transporter [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 278

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 94/263 (35%), Gaps = 29/263 (11%)

Query: 2   YKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFAE 49
            K   +  +  + +     + N            AS+L  IK++G L  G +     +  
Sbjct: 7   KKLGLIVAIGAMAISIVGCAGNKNEAGSKGGKETASVLESIKQKGKLVVGTSADYPPYEF 66

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              V       GFD+   ++L+  +  +   +Q   ++     +ALQ+ ++D++      
Sbjct: 67  HKEVGGKDQIVGFDISIAKSLAEDLGVE---LQINDMDFDGLLIALQAGKVDMVFAGMTP 123

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R       F  I Y    GFI+ K  +  I S+  L    I VQ G+  E    +  
Sbjct: 124 TDER--KQNAEFSDIYYTAQHGFIVRKGEEGNIKSIDDLKDKKIGVQKGSIQERLANEKI 181

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK 223
                        +V ++    + ++ DA   ++         N      +VIL D    
Sbjct: 182 P----DAEKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGG 237

Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246
           S  A A+ +G  +    ++ T  
Sbjct: 238 S--AIAMSKGSDDLKGEINKTIQ 258


>gi|322411493|gb|EFY02401.1| arginine-binding protein [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 270

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 77/264 (29%), Gaps = 18/264 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
            K  F  ++ L+I    +   +   +    IK+ G L   ++     F     V      
Sbjct: 4   KKILFSLLVPLLIFTLAACGKSEKVNRQDSIKQAGKLVVAVSPDYAPFEFKALVNGKDTI 63

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+   +A++  +      ++  P++      +LQ+ + D+      +T  R      
Sbjct: 64  VGADIQLAQAIADELGVK---LELSPMSFDNVLSSLQTGKADMAISGLSYTKERAKV--Y 118

Query: 117 AFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      +M     K    V+ L G  +  Q G+  E  +       N     +
Sbjct: 119 DFSTPYYETENAILMRAADAKAAKDVTSLEGQKVAAQKGSIEEGLVKSQLPKSN----LV 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               + E     +A +  A   +          +   +              A A+ +  
Sbjct: 175 ALTAMGEAVNELKAGQVYAVDLEGPVAAGYLAQHKDLALASFSLKTTDGDAKAVALPKNS 234

Query: 235 TEWYNIVSWTHYAMVTAEELGITQ 258
                 V+        AE+     
Sbjct: 235 GALTKTVNKVI--AKLAEDNQYKT 256


>gi|261820773|ref|YP_003258879.1| cationic amino acid ABC transporter periplasmic protein
           [Pectobacterium wasabiae WPP163]
 gi|261604786|gb|ACX87272.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium wasabiae WPP163]
          Length = 259

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 96/279 (34%), Gaps = 29/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V  L LI+          S + DI K   +K G +     F    A+G+  GFD
Sbjct: 1   MKKLIKVLPLALIL-------AAGSAMADIPKN--IKIGTDPTYAPFESKNASGELVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKELCKRI---EANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L G  + V   +T E      ++        + ++  
Sbjct: 107 KLYAANSRLIAKKGANIEPTLASLGGKRVGVLQASTQEAFANANWQPKG--VEVVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R DA   D  A     L  D   ++      +             + + D
Sbjct: 165 DLIYADLAAGRVDAAFQDEVAASEGFLKLDMGKDYAFAGPAVKDDKFFGVGTGMGLRKAD 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A+  A E        +  +K   + DV
Sbjct: 225 TELKA-------ALDKAFEAMRKDGTYDTFAKKYFDFDV 256


>gi|86605397|ref|YP_474160.1| cystine ABC transporter, cystine-binding protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86553939|gb|ABC98897.1| cystine ABC transporter, cystine-binding protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 287

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 89/261 (34%), Gaps = 23/261 (8%)

Query: 5   FFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            F+++     L     +  +  + +L  +++RG L+   ++     + +  +G W+GFDV
Sbjct: 12  LFLTLAGCWALGTHQGSLLAQGSDLLAQVQERGVLRVSTDSNYRPQSYLNPDGSWEGFDV 71

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R ++  +        +L +N         + + D+   +   T  R+    L F   
Sbjct: 72  DVAREIAKRLGVKAE---FLDINFDVITAGSWNGRWDVNVGSMTVTAERQK--ALLFTIP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-------PI 174
            Y+    F++H+   ++ ++ L G  + V   TT +  L                     
Sbjct: 127 YYYTPASFVVHQASTLTDIAALEGKRVGVGTATTYQAYLEGNLTLEGETIQVPAPRVDIR 186

Query: 175 VFERVEEIDAAYRAH---RCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAI 230
           +++               R DA    +     A++           L D +    LA A+
Sbjct: 187 IYDTDSLALQDLALGDGTRLDAVLTALPTAENAIREGLP----LKTLGDPVYYEALAVAL 242

Query: 231 IQGDTEWYNIVSWTHYAMVTA 251
            +        +      ++ +
Sbjct: 243 DRSSPAPSESLQAKINEILES 263


>gi|329298254|ref|ZP_08255590.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Plautia stali symbiont]
          Length = 243

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V ++   +GFDVD   AL   I    +   +          +L+ 
Sbjct: 22  TLRFATEASYPPFEFVDSDNKIQGFDVDLANALCKEI---DATCTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D +    D T  RE    + F    Y +   FI  K   ++ V+ L G  + VQ GT
Sbjct: 79  RRFDAVMAGMDITPEREKH--VLFTKPYYDNSATFIAQKG-KLADVAALKGKRVGVQNGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L+D     +     + ++  +      +  R DA  GD + +      N   +  
Sbjct: 136 THQKYLSD----KHSDITIVPYDSYQNAVLDLKNGRIDAVFGDTAVVNEWLKQNANLAAL 191

Query: 215 --VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       + L  A+ QG+TE     +   
Sbjct: 192 GEKVTDKAYFGTGLGIAVRQGNTELQQKFNGAL 224


>gi|317406131|gb|EFV86388.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans
           C54]
          Length = 247

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 13/212 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++   +        V  +G   GFD++   AL++A+      ++++ ++ K    ALQ+
Sbjct: 28  TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAAAMGKK---VEWIDIDFKGLIPALQA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + DI       T  R     + F    Y  G   +  K   + ++  L G  + VQ GT
Sbjct: 84  GRADIAVSAIYITPERSKV--VDFTDPYYAGGLVVLTKKDGPVKTLKDLDGRKVSVQVGT 141

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L +++ +       +  E+ +E+    +  R DA         A KL     ++ 
Sbjct: 142 KSVNYLKEHYPS----VQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTTDL 194

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            +L D I+      A+ +   E    ++    
Sbjct: 195 TVLADQITTEDYGIAVPKNKPELTRGLNEALQ 226


>gi|324112847|gb|EGC06823.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
          Length = 260

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    D +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPAVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|319950339|ref|ZP_08024258.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4]
 gi|319436031|gb|EFV91232.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4]
          Length = 273

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 8/216 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK GI     G    + N ++ GFDVD  R ++  +      I+++   + +R   L++ 
Sbjct: 34  LKVGIKFDQPGLGLKEGN-EYTGFDVDVARYIAEKLGTAEDDIEWIQAPSAQRETLLETG 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154
           Q+D++      T  R+  +G  F    +  GQ  ++       +    L G  +C   G+
Sbjct: 93  QVDMIVATYSITDSRKEKVG--FAGPYFIAGQDLLVRADDDSITGPDSLDGKRLCSVTGS 150

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T+  T+ +         +   F    E  +A  ++  DA T D + L      +    + 
Sbjct: 151 TSAQTVKEKVP----GVNLQEFGTYSECVSALVSNAVDALTTDDTILAGYASQDQYQGQL 206

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            ++    ++      I +GDTE    ++     M++
Sbjct: 207 KVVGAPFTEERYGVGIAKGDTEKCEQINEAIREMIS 242


>gi|171320533|ref|ZP_02909559.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171094226|gb|EDT39307.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 266

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 72/227 (31%), Gaps = 13/227 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S  A +L  +K+ G LK  +      F    A G  +GFDVD   A+++ +   P    +
Sbjct: 24  SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVATAVAARLGVKP---AF 80

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138
           +          LQ+ + D++      T  R     L F     +     +  +       
Sbjct: 81  VTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVYSSAQLLQRQNDTRAFK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+ +L G  + V  G+     +              V+    E      A R DA   D 
Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + +  + N              +  +     +G+ ++   +    
Sbjct: 194 -LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239


>gi|313115586|ref|ZP_07801045.1| bacterial extracellular solute-binding protein, family 3
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622101|gb|EFQ05597.1| bacterial extracellular solute-binding protein, family 3
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 282

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 100/264 (37%), Gaps = 15/264 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  IK+ G +  G+ +    F  V  NG+++G+DV F R L   +  +   I ++   A
Sbjct: 5   TLDQIKESGTINIGVFSDKNPFGYVDENGEYQGYDVYFARRLGEDLGVE---INFVSTEA 61

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144
             R   LQ+ + D++  N   T  R     + F         G I      I+++ +  +
Sbjct: 62  ANRIEYLQTGKADVILANFTVTPERAE--EVDFALPYMNVALGVISPDSNVITTLDNWNA 119

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              + V +GTT E  L   +           ++       A       A+  D + + A 
Sbjct: 120 DDQMIVISGTTAETYLTKEYP----DIPLQKYDSYATAKNALENGNGVAWANDNTEVIAF 175

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                     V +P + S+  +APA+ QG+T   + ++    A+    E     K+  + 
Sbjct: 176 AKQ--NTGYTVGIPSLGSQDTIAPAVSQGNTTVLDWLNEEIKAL---GEENFFHKDYEET 230

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEA 288
             DT   D +  L ++     G  
Sbjct: 231 LVDTYGLDYEDELVVEGGVTGGAD 254


>gi|303247503|ref|ZP_07333775.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
 gi|302491199|gb|EFL51091.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
          Length = 250

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           + +L F   +          +      GI+ G   F  V  +G   GFDV+    ++  +
Sbjct: 14  VFVLCFGGLAAA--------EEKVYINGIDFGFPPFGYVDKDGKPTGFDVESLNWIAKKM 65

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K+++ P++      AL +K+IDI++     T  R     + F    Y   Q  ++
Sbjct: 66  G---FKVKHQPMDWDGIIPALLAKKIDIVASGMSATAERAK--KVDFSIPYYEVTQVLLV 120

Query: 132 HKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
            +K   +    L  G  I VQ GT T   L +       K+  + ++  +      +  R
Sbjct: 121 PEKDKTTLAEMLKSGKKIGVQRGTVTAKLLEELVTKPGYKFEVVPYDSTDLSIEDVKIGR 180

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 D +     K     P   +             A+ + D E+   ++     ++ 
Sbjct: 181 IAGSGMDSTI---AKEVMKNPGFKIAGTFDAKPEKYGYAMRKEDKEFQKKINDGLKLLMA 237


>gi|293415602|ref|ZP_06658245.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B185]
 gi|291433250|gb|EFF06229.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli B185]
          Length = 260

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANEAWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|320183197|gb|EFW58055.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Shigella flexneri CDC 796-83]
          Length = 243

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIYANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       D P    +   +  K      L  A+ QG+TE
Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 216 LQQKLNTAL 224


>gi|226313902|ref|YP_002773798.1| L-cystine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226096852|dbj|BAH45294.1| L-cystine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 277

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 71/270 (26%), Gaps = 33/270 (12%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASI--------LGDIKKRGFLKCGI 40
           M K  F  +   +++                 +  A          L  +K  G +  G 
Sbjct: 1   MKKLLFSLLASTLLVALAGCGSSSTGQSPQNSAAPAPTEEKKEQNLLEKVKADGKMLIGT 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 F     +G   G+DV+    ++  I  +P    +        F  L SK+ D++
Sbjct: 61  EGTYAPFTFHDQSGKLTGYDVEVVTEVAKRIGVEP---VFQETQWDAMFAGLDSKRFDVV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELT 159
           +         +      F           + HK    +   + + G         T    
Sbjct: 118 ANQVGI--RPDRQEKYDFSNPYTVSTAVLVTHKDNTTVKGFADIKGLKAA----QTLTSN 171

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L D  K +      +  E   +      + R D    D  +L             +I  D
Sbjct: 172 LTDIAKKNG--AEIVGVEGFNQAIDLLVSKRVDVTINDGISLLDFMKQKPDVPIKIIAKD 229

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                       +G TE  +  +     M 
Sbjct: 230 PNVAK-NGFLFRKGSTELVDAFNKALDDMT 258


>gi|224367455|ref|YP_002601618.1| ArgT [Desulfobacterium autotrophicum HRM2]
 gi|223690171|gb|ACN13454.1| ArgT [Desulfobacterium autotrophicum HRM2]
          Length = 250

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 82/246 (33%), Gaps = 17/246 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            ++  + +  + ++   + +  A           +  GI+     FA +   G   GFDV
Sbjct: 3   KRNLILLVAAVSLIVAGTTTAFAG--------KKIVNGIDANFPPFAYIDKTGKPAGFDV 54

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    ++  +     +++++P++      +L +K+IDI++     T   + S  + F   
Sbjct: 55  EAMEWIAKDLG---LEVEHMPIDWDGIITSLLTKKIDIIASGMSITP--DRSEKVTFTIP 109

Query: 122 TYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +   Q  ++ K   ++    +  G  I VQ GTT    L    +     +    +    
Sbjct: 110 YWKINQVMVVKKDSTLTMNDLMKGGKKIGVQQGTTEAKWLKAESEPRAWNFKLGYYSSSP 169

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R                   +    ++    +       A+ + +TE    
Sbjct: 170 LAVEDVLNGR---IAAAAMDDAPAHDAVSKKDVKILGNFGMEAEDFGYAVRKDETELLEK 226

Query: 241 VSWTHY 246
           ++ +  
Sbjct: 227 INASLK 232


>gi|169826052|ref|YP_001696210.1| histidine-binding protein [Lysinibacillus sphaericus C3-41]
 gi|168990540|gb|ACA38080.1| Histidine-binding protein precursor (HBP) [Lysinibacillus
           sphaericus C3-41]
          Length = 264

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +   K G       F  V   G   G DVD  +A++  +     ++++  +  +  F  +
Sbjct: 41  KKVYKVGTEATFAPFESVDDKGKIVGIDVDILKAIADEM---DFEVEWNNIGWEPVFQTI 97

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           ++ +  I +     T  R+      F    Y      ++ +   I S+ +L    + VQ 
Sbjct: 98  KNGETHIGASGITITDERKE--SFDFTEPYYESQLLIVVKEDSKIKSLDELKDKKVSVQI 155

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
             T  +             + + FE              DA  GD + +Y     +    
Sbjct: 156 NATGHMAAKKLQGEA--STNIMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQK 213

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             VI  D   K      + +G+ E  + ++    
Sbjct: 214 IKVIQDDAFEKEYYGFMVQKGNKELLDKLNEGLK 247


>gi|150019609|ref|YP_001311863.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149906074|gb|ABR36907.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 277

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 87/267 (32%), Gaps = 31/267 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINTGL 44
           M K     ++  + +   +F                   +S L DIK +G +  G +   
Sbjct: 1   MKKFLLKKLIVFVAISSIAFGIIGCSSNTNSSGKNSDVKSSSLSDIKSKGKIVVGTSADY 60

Query: 45  VGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
             +     +       G DV   + ++  +  +   ++   ++     ++LQ+ + D++ 
Sbjct: 61  PPYEFHKEIDGKDQIVGIDVSIAKEVAKDLGVE---LEIKDMDFDGLLVSLQAGKSDLVF 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELT 159
              + T  R       F  I   +   FI+ K     I S+  L    I VQ G+  E  
Sbjct: 118 AAMNPTDER--RENADFSDIYNKEKNIFIVRKGEADSIKSMDDLKNKKIGVQKGSVQEGL 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           + D   +           +  ++    +  + DA   D          N    E   +  
Sbjct: 176 VKDNLPSA----EVKGLGKATDLVLDLKNKKVDAILLDSPVAKFNCDKN-NDIELTSVTI 230

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +   A A+ +G TE    ++ T  
Sbjct: 231 EAQEDGAAIAMRKGSTELQTEINKTIK 257


>gi|139437314|ref|ZP_01771474.1| Hypothetical protein COLAER_00453 [Collinsella aerofaciens ATCC
           25986]
 gi|133776961|gb|EBA40781.1| Hypothetical protein COLAER_00453 [Collinsella aerofaciens ATCC
           25986]
          Length = 286

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 98/279 (35%), Gaps = 44/279 (15%)

Query: 1   MYKDFFVSILC----LIILFFTSFSTNASI--------------LGDI--------KKRG 34
           M      +        + L  T   ++ +               +  +         K G
Sbjct: 1   MKLKKLGAFAATGAMALALALTGCGSSNATSGSDASSSSSDDAKVEKVDGSKEYALVKDG 60

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G +     F     NGD++GFD++  +A+   +  D   ++Y+  +       + S
Sbjct: 61  TLTVGTSAEYAPFEYKDDNGDYQGFDLELIKAIGDKLGLD---VEYVNNDFDTLVPGVAS 117

Query: 95  K-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS------GAS 147
             + D+       T  RE    + F    Y D Q  +        +    S       A+
Sbjct: 118 GAKYDVSIAAITDTPEREK--EVTFSDSYYMDDQAIVTKVDNTDITADNFSEKLNNADAT 175

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ+G+T E    + F         + ++   E  +A ++ + DA   + S   A +LT
Sbjct: 176 IIVQSGSTAEAFAQENFPKAK----IVPYKDATECFSALQSDKGDAVVTNRS--VASQLT 229

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++ +    +  I +    A AI QG+T+  + ++    
Sbjct: 230 AEQFNTCQTIKQISTGEEYAIAINQGNTKLKDDINQAIK 268


>gi|319763455|ref|YP_004127392.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|317118016|gb|ADV00505.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
          Length = 251

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 12/211 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G +        V  NG   GFD++   A++ A+     +++++ ++ K     L S
Sbjct: 29  VLRVGTDATFPPMEFV-ENGKRTGFDIELVEAIAKAMGK---QVEWVDIDFKGLIPGLIS 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D+       T  R   +     P         +      I  +S L G  + VQ GT
Sbjct: 85  RRFDMAVSAIYITDERRKVVDFT-EPYYAGGLVAMVKESNTSIRKLSDLDGKRVSVQVGT 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L      +  K   I  E+ +E+       R DA      A Y    T       
Sbjct: 144 KSVGFLTQ----NYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPG---L 196

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +L + ++      A+ +   E    V+   
Sbjct: 197 RVLEEQLTTEEYGMALRKDTPELTKAVNAAL 227


>gi|113866078|ref|YP_724567.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113524854|emb|CAJ91199.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 251

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 77/244 (31%), Gaps = 19/244 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K     +  L  L   + +         +    L+   +        +  NG   GFDV
Sbjct: 5   RKCLMAGLATLTALTLGTAAQA-------QDNAVLRVATDATFPPMEFI-ENGKRTGFDV 56

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++  +     ++++  ++ K     L S++ D+       T  R   +     P 
Sbjct: 57  ELVEAMAKTMGK---RVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFT-EPY 112

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   +      + + + L+G  + VQ GT +   L D +     +   +  E+ +E
Sbjct: 113 YVGGLVALVKSGNTTVHAPADLNGKKVSVQVGTKSVSFLRDTYP----QVQRVEVEKNQE 168

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +       R DA      A      T        ++   ++      A+ +   E    +
Sbjct: 169 MFNLVEIGRADAAVTGKPAAMQYVKTRGG---LRMVEQQLTTEEYGMAVRKDTPELTRAL 225

Query: 242 SWTH 245
           +   
Sbjct: 226 NAAL 229


>gi|152985756|ref|YP_001347035.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa PA7]
 gi|150960914|gb|ABR82939.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa PA7]
          Length = 268

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 77/252 (30%), Gaps = 18/252 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +    ++ CL++L   S     S L  I   G L+ G       F+     G + GFDV
Sbjct: 5   IRHLIQALACLVLLASASLQAQESRLDRILDSGVLRVGSTGDYKPFSYRTEQGGYVGFDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+ ++    +++  +P +       L   + DI        L R+      F   
Sbjct: 65  DMAQRLAESLG---ARLVLVPTSWPSLMRDLADDRFDIAMSGISINLERQR--QAYFSMP 119

Query: 122 TYFDGQGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              DG+  I       +          G +  V  G T E     + +AH  +   +V  
Sbjct: 120 YLRDGKTPITLCANQARFQTLEQIDRPGVTAIVNPGGTNE----KFARAHLKQARILVHP 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQ 232
               I       + D    D          +       P       +     P   A  +
Sbjct: 176 DNVTIFQQIVDGKADLMMTDAIETRLQSRLHPELCAVHPERPFDFAEKAYLLPRDEAFKR 235

Query: 233 GDTEWYNIVSWT 244
              +W +I   T
Sbjct: 236 YVDQWLHIAEQT 247


>gi|86609571|ref|YP_478333.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558113|gb|ABD03070.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 287

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 89/262 (33%), Gaps = 28/262 (10%)

Query: 9   ILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            LCL +    + S +        + +L  +++RG L+   ++     +    +G W+GFD
Sbjct: 11  ALCLTLAGCWALSAHQGSLLAQGSDLLAQVQERGVLRISTDSNYRPQSYRNPDGSWEGFD 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R ++  +  +     +L +N         + + D+   +   T  R+    L F  
Sbjct: 71  VDVAREIAKRLGVEAE---FLDINFDVITAGSWNGRWDVNVGSMTVTAERQK--ALLFTI 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-------P 173
             Y+    F++H+   ++ ++ L G  + V   TT +  L                    
Sbjct: 126 PYYYTPASFVVHQASTLTDIAALEGKRVGVGTATTYQAYLEGNLTLEGETIQVPAPRVDI 185

Query: 174 IVFERVEEIDAAYRAH---RCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPA 229
            +++               R DA    +     A++           L D +    LA A
Sbjct: 186 RIYDTDSLALQDLALGDGTRLDAVLTALPTAENAIREGLP----LKTLGDPVYYEALAVA 241

Query: 230 IIQGDTEWYNIVSWTHYAMVTA 251
           + +        +      ++ +
Sbjct: 242 LDRSSPAPSESLQAKINEILES 263


>gi|329297448|ref|ZP_08254784.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Plautia stali symbiont]
          Length = 260

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 83/254 (32%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +      S  AS+   + +   L  G +     F    A G   GFD
Sbjct: 1   MKKRVLALSLMLAM------SGAASVFAAVPQS--LCIGTDPTYPPFESKNAQGQLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I    +K  Y+  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLANEICKRI---KTKCTYVESDFDALIPSLKAKKIDAIISSLSITEKRQEEIA--FSE 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   +  ++  L G +I +  GTT E    +Y++   +   P  +   
Sbjct: 108 KLYAANARLVAPKGSKLQPTIESLKGKNIGLLQGTTQETYANEYWRPKGVTVTP--YANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA   D        L       +      +    +        + + D
Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPAVKDEKIFGVGTGMGLCKDD 225

Query: 235 TEWYNIVSWTHYAM 248
            +    +      M
Sbjct: 226 ADLKAAIDKAFNDM 239


>gi|325978616|ref|YP_004288332.1| polar amino acid transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178544|emb|CBZ48588.1| polar amino acid transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 271

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 16/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K F   IL +I+   ++ S++  +    I+ +G +     +    F     +      
Sbjct: 1   MKKFFRGFILLIIVGSLSACSSSTGVSQSSIQDKGKIVIATESEFAPFEFKTLIDGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++   A++ A+  D     +  ++      ++ S + DI       T  R+     
Sbjct: 61  VGADIELGNAIADALGVDAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AY 115

Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +++  L+G ++  Q G+  E    D           +
Sbjct: 116 DFSDAYYEAENIVIIKKSDEATYTTLESLAGKAVGAQKGSIQENIAKDQLP----DSSLV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    + ++  A   + +        ND      +  +       A A  +G 
Sbjct: 172 SLTSNGEMINELKNNQLQAVVLEKAIAEGYVSQNDDLMIADMTLESSDTDAYAVAFAKGT 231

Query: 235 TE-WYNIVSWTHY 246
            +   + V+    
Sbjct: 232 DQDLIDTVNDVIK 244


>gi|330821143|ref|YP_004350005.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
 gi|327373138|gb|AEA64493.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
          Length = 267

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 15/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   ++ +          +  A +L  +K+ G LK  +      F    A+G   GFD
Sbjct: 7   MFK---LACIAAWFGVAAGAAQAADLLDTVKQAGVLKIAMEGTYPPFDSRDASGKLVGFD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+++ +   P    ++          LQ+ + D++      T  R+    L F  
Sbjct: 64  VDVAKAVAARLGVKPE---FIATEWSGILAGLQAGKYDVIVNEVTITPPRK--QALDFSQ 118

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +     I          S+++  G         T      D         +   +  
Sbjct: 119 PYVYSAAQLIQRANDDRRFGSLAEFKGDKKLGVTLGTNY----DAMARAVPGINAQTYPG 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E  +     R DA   D   +  L  T   P     +     +  +     +G+ ++ 
Sbjct: 175 APEKLSDLVNRRIDATLDDRLMVPYLLKTTQLPLRAGAVVPGGGQE-MGIPFRKGNPKFA 233

Query: 239 NIVSWTHYAMVT 250
             +     AM  
Sbjct: 234 KALDDAISAMKQ 245


>gi|300311601|ref|YP_003775693.1| glutamine ABC transporter periplasmic protein [Herbaspirillum
           seropedicae SmR1]
 gi|300074386|gb|ADJ63785.1| ABC-type glutamine transport system, periplasmic component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 251

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 25/251 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    K     +  L +L     + +A+          ++ G +        V  +G   
Sbjct: 1   MKTFSKLLCAGMASLSLLIAAVPAAHANGE-------VIRVGTDATFPPMEFV-KDGKRT 52

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+   AL+  +      +Q++ ++ K     L S + DI +     T  R     + 
Sbjct: 53  GFDVELIEALAKTMGKK---VQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKV--VN 107

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y  G   ++ +    I     L+ G  + VQ GT +   L D F         + 
Sbjct: 108 FSDPYYRGGLAVLVRRDDNSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFP----GVERVE 163

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E+ + +       R +A      A      T        +L   ++      A+ + DT
Sbjct: 164 VEKNQAMFDLLATGRVNAVVTGRPAAVEYARTQP---LVRVLDKGLTTELYGFALRKSDT 220

Query: 236 EWYNIVSWTHY 246
           E    ++    
Sbjct: 221 ELTAQLNKALQ 231


>gi|126437886|ref|YP_001073577.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126237686|gb|ABO01087.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 489

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 31/268 (11%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  S +      IK  G L+ G       F+   A+G   G+DVD  RA++  I      
Sbjct: 18  SCASADDGSDEPIKSAGVLRVGTEGVYAPFSYHDASGQLVGYDVDVARAVADKIGVRAE- 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
             ++       F AL++ + D+++        R                   +       
Sbjct: 77  --FVETPWDAMFAALEAGRFDVVANEVTINAERRA--KYDLSQPYSVGEGVIVTRADDDS 132

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+++  L+G      A +      ++  +    +   +      +        R D    
Sbjct: 133 IATLDDLAGKVAAENATS----NWSEVAREAGARVEAVE--GFTQAITLLNQGRVDVVVN 186

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D  A+YA        +   I   +  KS    A  +       +                
Sbjct: 187 DSIAVYAYLAETGD-TSVKIAGTVGEKSEQGFAARKDSGLLPELNRA------------- 232

Query: 257 TQKNINQVSKDTTNPDV-QRFLGIDKSS 283
               ++++  D T  ++ QR+L  + S 
Sbjct: 233 ----LDELRADGTLAEISQRYLKANASG 256


>gi|81429106|ref|YP_396106.1| putative glutamine/glutamate ABC transporter,
           membrane-spanning/substrate-binding subunit precursor
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610748|emb|CAI55799.1| Putative glutamine/glutamate ABC transporter,
           membrane-spanning/substrate-binding subunit precursor
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 478

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 94/303 (31%), Gaps = 15/303 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L++  F   S     +   +K   +  G +     F     +  + G D
Sbjct: 1   MKKITLFLSSLLLLGLFVFGSQQVQSVQAAEKTYEI--GTDVTYPPFEFANKDNKYVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ +   +  K+   PL       A+QS QID +      T  R+      F  
Sbjct: 59  IDIMKAIAKS---EGFKVNIQPLGFNAAVQAVQSGQIDGVIAGMTITDERKA--KFDFAD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + K   I+ +  L G  + ++ GT          K +      + F+  +
Sbjct: 114 PYYHTGVVMAVKKDSKITGLKGLKGQRVAIKTGTAAGDYAKSKAKEYGF--TTVTFDDSD 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +          A   D   +   +          I+ + +       A+ +  + E   
Sbjct: 172 NMYNDVVNGNSVACFEDEPVM---QYGIKTGLGLKIVTNPVQGGDYGFAVKKGTNPELVA 228

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL-GLTKDWTYR 298
             +     +  + E    Q         +       F G+ K  N G  L GL +     
Sbjct: 229 KFNKGLKKLKASGEYAKIQAKYLNTKASSEKEADHSFFGLLKE-NKGAILDGLGQTLLLT 287

Query: 299 IIR 301
           +I 
Sbjct: 288 VIA 290


>gi|238898833|ref|YP_002924515.1| arginine transport protein (ABC superfamily, peri_bind) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466593|gb|ACQ68367.1| arginine transport protein (ABC superfamily, peri_bind) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 249

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L+ L  +        L    ++  L+         F  + A+ + +GFD
Sbjct: 1   MKKLVLSVFFALVSLAIS--------LSVFAEKKILRFATEASYPPFEFMSAHNEIEGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +     +  ++         +L+S++ID +    D T  R   +   F  
Sbjct: 53  IDLAKALCQKM---QIECVFVNQAFDSLIPSLKSRRIDAVIAGLDITPERSKQVA--FTI 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +   FI+      + +  L G  + +Q G+T +  L D          PI +   +
Sbjct: 108 PYCKNSALFIIQTG-KFAGIDDLQGKRVGMQNGSTHQKFLMDEHPE----MIPISYSTYQ 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R DA  GD +A+    +    P+   +   I   +     L  A+ Q D  
Sbjct: 163 NAILDLKNGRLDAVFGDTAAVNQWLI--KNPTLGALGNKITDSNYFGVGLGIAVKQADDS 220

Query: 237 WYNIVSWTHY 246
             N ++    
Sbjct: 221 LLNKLNEAIK 230


>gi|223041391|ref|ZP_03611595.1| putative amino-acid ABC transporter-binding protein [Actinobacillus
           minor 202]
 gi|223017781|gb|EEF16187.1| putative amino-acid ABC transporter-binding protein [Actinobacillus
           minor 202]
          Length = 260

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 84/247 (34%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  L  + L  ++ S    S+L  I  +G +  G       F     NG   G+
Sbjct: 1   MLKKLSVIALTTLALATSATSFAKESLLERINNKGTITVGTEGTYAPFTYHDENGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      +++   N       L++ + D+++     T   E        
Sbjct: 61  DVEVTRAIADKLGVK---VEFKETNWDSMLAGLKADRFDLVANQVALT-SPERQATFDKT 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G      K    I  V  + G     Q+ T+    LA  ++A       +  + 
Sbjct: 117 EPYNWSGAVLAAPKDETRIKKVEDVKGLK-AAQSLTSNYGELARKYEA-----VIVPVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +        R D +T + S      L  +  S+  I  +   K        +G+ E  
Sbjct: 171 LAQSVKVIETKRAD-FTFNDSLAVLDYLKKNPKSDLKIFWESSDKVGAGLVANKGNQEAL 229

Query: 239 NIVSWTH 245
           + +S   
Sbjct: 230 DKISAVI 236


>gi|91786939|ref|YP_547891.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91696164|gb|ABE42993.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 249

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 79/211 (37%), Gaps = 14/211 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G +        V  NG   GFDV+   A++ A+     +++++ ++ K     L SK
Sbjct: 29  LRVGTDATFPPMEFV-ENGKRTGFDVELVEAIAKAMGK---QVEWVDIDFKGLIPGLMSK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
           + D+       T  R+    + F    Y  G   +  +    I  ++ L G  + VQ GT
Sbjct: 85  RFDMAVSAIYITDERKKV--VDFTNSYYAGGLVAMTKEGNTAIKKLADLEGKKVTVQVGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L +++         I  E+ +E+       R DA         A +    RP   
Sbjct: 143 KSVGYLQEHYPK----VQRIEVEKNQEMFNLVDIGRADAAVTGKP--AAFQYVRTRPG-L 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +L + ++      A+ +   E    V+   
Sbjct: 196 RVLEEQLTTEEYGMALRKDTPELTRAVNGAI 226


>gi|238788815|ref|ZP_04632606.1| Glutamine-binding periplasmic protein [Yersinia frederiksenii ATCC
           33641]
 gi|238723120|gb|EEQ14769.1| Glutamine-binding periplasmic protein [Yersinia frederiksenii ATCC
           33641]
          Length = 247

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 22/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     VS+  L + F  S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSLVKVSLAALTLAFAVSSHAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K    P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  IDLWDAIAKKL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I   + L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYNSGLLVMVKADNNDIKGEADLAGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T     +   + + I       A  QG ++   
Sbjct: 162 DNAYLELGTGRADAVLHDTPNILYFIKTAGNG-QFKAVGESIKAQQYGVAFPQG-SDLRE 219

Query: 240 IVSWTHYAMVT 250
            V+    ++  
Sbjct: 220 KVNAALKSLKE 230


>gi|83592631|ref|YP_426383.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83575545|gb|ABC22096.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 292

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 76/246 (30%), Gaps = 10/246 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K        L+ +   S   NA  L DIKK G +K         F  ++ +  + G D D
Sbjct: 22  KAMVAGAAALMTMVAASLPANADTLEDIKKAGVIKAATEMQFPPFDFLEGD-KYVGVDRD 80

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      ++Y+ L        L++ + D++      T  R       F    
Sbjct: 81  LMDEVAKELGVK---VEYIDLPWTSVLPGLEAGKFDLVIAPVTITKERLARYA--FTLPI 135

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                  +       I+    ++G +I    GT+    + +Y  A   K     +    +
Sbjct: 136 SEGTAALMKRADDDSITKPEDIAGKTIGGGKGTSQLGQIKEYAAALPGKVEFKEYVDSNQ 195

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QGDTEWYN 239
             A   A R DA       L          +  V+LP     +  +      + D     
Sbjct: 196 SYADLAAGRVDASVNSYPNLAYAAAQRPE-TFAVVLPPFGKTTYFSWVSRLGEKDASLVE 254

Query: 240 IVSWTH 245
            V+   
Sbjct: 255 AVNAAL 260


>gi|42518711|ref|NP_964641.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582997|gb|AAS08607.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 497

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 89/264 (33%), Gaps = 28/264 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46
           M K   +S    +++FF+  +                 S+L  IKK G L  G +     
Sbjct: 1   MKKTKLLSFFFALLMFFSLGATFIKPAQAASQKQVAEGSVLKKIKKSGELVVGTSADYPP 60

Query: 47  FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
                       + G D++  + ++  +      +    ++     +AL++ ++D++   
Sbjct: 61  LEFTASENGKTKYVGVDIELAKDIAKDLGVK---LVIKNMSFDSLLVALETGKVDMVISA 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLAD 162
              T  R+ S+  +            +  K     +S+  L G ++  Q G+     +  
Sbjct: 118 MTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKYTSIQSLKGQTVGAQTGSNQYNLVKS 177

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDII 221
             K            ++  +  A ++ +  A   +     A    N    + H  L +  
Sbjct: 178 QMK----DSKLKGLGKINNLVLALQSGKVSAVVVEELIAKAYAENNSGLAAVHSNLKETQ 233

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
           + +  A AI +G  +    V+ T 
Sbjct: 234 AGN--AVAIAKGQDDLVAQVNKTI 255


>gi|330820140|ref|YP_004349002.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Burkholderia
           gladioli BSR3]
 gi|327372135|gb|AEA63490.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Burkholderia
           gladioli BSR3]
          Length = 269

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 11/229 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           F + +  A  L  I K G L+  +      F  V A+   +G+D+D    L+ ++     
Sbjct: 27  FGANAAQADALDTITKSGTLRVAVPEDYPPFGSVGADMQPQGYDIDTAALLAKSLGVK-- 84

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +Q +P+N+  R   L + ++D++  +   T  RE    + F        QG        
Sbjct: 85  -LQLVPVNSANRIPYLTTNKVDLVISSLGKTPDREKV--IDFSAAYGPYFQGVFGPADIK 141

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           ++  + L+G ++    G   E+ L               FE       A+ + +      
Sbjct: 142 VAGPADLTGKTVGATRGALEEIALTQMAP----NATIKRFEDNNATIQAFLSGQVQLIAA 197

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 A+      P        +I  SP    + + +      V    
Sbjct: 198 GNIVAAAILAR--NPPRRPETKFVIKNSPCFVGLNKNEPRLLAKVDAAI 244


>gi|319780440|ref|YP_004139916.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317166328|gb|ADV09866.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 258

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 75/250 (30%), Gaps = 17/250 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F   +    +  T  +  AS          L+ G       F    A+G   GFD+D 
Sbjct: 2   RLFGRFVLAASVALTLATGAASAQDK-----KLRIGTEGAYPPFNYASADGTLGGFDIDL 56

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +AL + +    ++ ++   +      ALQ+ + D +      T+  E +  + F    Y
Sbjct: 57  GKALCAEM---KAECEFSVQDFDGSIPALQAGKFDAIIN---ITITPERAEKVEFTHKYY 110

Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                  + K   I  +S   L G ++ VQ  T        +            +   ++
Sbjct: 111 QTPPAIAVPKDSTIAGTSPEDLKGKALGVQTATIH----QKFADQKYAGSTVKAYPTGDD 166

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R DA       L       D     ++       +   P +     +    +
Sbjct: 167 ARTDMANGRLDAIMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKEL 226

Query: 242 SWTHYAMVTA 251
           +    A + A
Sbjct: 227 ADKLNAAIDA 236


>gi|300214734|gb|ADJ79150.1| Polar amino acid ABC transporter, substrate binding protein
           [Lactobacillus salivarius CECT 5713]
          Length = 285

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 81/257 (31%), Gaps = 18/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAE 49
           M K   +    L  L   +     + +   +  G               G++   V    
Sbjct: 1   MKKIVKIITCLLAFLIVGATLAGCTNVRK-RANGQDNWKKIEKKKKVVIGLDDSFVPMGF 59

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            + +G   GFDVD  R +      D   + +  ++   +   L++  ID++         
Sbjct: 60  REKDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHN 168
           R+ ++   F      + Q  +  KK+ +     + G ++ +Q+G++  E  ++      N
Sbjct: 117 RKKTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKN 174

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + ++          A+R      D             P+ + I          A 
Sbjct: 175 YVKEAVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAV 234

Query: 229 AIIQGDTEWYNIVSWTH 245
            + +GD      ++   
Sbjct: 235 GMRKGDKTLQKKINVAL 251


>gi|253689717|ref|YP_003018907.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756295|gb|ACT14371.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 261

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  FV  LC   L  T   T+A              G       F    A  + +GFD+
Sbjct: 3   KKLLFVGALCATALSTTVLPTSAFAAEP-----TYVVGSGGTYRPFEFENAQKELEGFDI 57

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A++ A   +   I+ +    +  F  L S   DI+      T  R+    + F   
Sbjct: 58  DIIKAIAKA---ENFNIKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSAP 112

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +   Q  ++ K   I S++ L    + V   +T ++ ++D    +        F+    
Sbjct: 113 YFPAEQSIVVPKGSTIDSIAALKDHKVGVVNSSTADVVVSDVLGKN--STSIKRFDNTPL 170

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +          A  GD+  +     T+     +++      +     A+ +G+ +    +
Sbjct: 171 MLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLREKI 230

Query: 242 SWTHY 246
           +    
Sbjct: 231 NAGLK 235


>gi|156973840|ref|YP_001444747.1| hypothetical protein VIBHAR_01550 [Vibrio harveyi ATCC BAA-1116]
 gi|156525434|gb|ABU70520.1| hypothetical protein VIBHAR_01550 [Vibrio harveyi ATCC BAA-1116]
          Length = 258

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +   K+   ++ GI      F+  + +G  KGFDVD   AL   +  +    Q +  +
Sbjct: 18  SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCQEMKVE---CQIVAQD 74

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 +L +++ D +      T  R+    + F          FI  K   +     L 
Sbjct: 75  WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 131

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL   
Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188

Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            L       +  +   ++           A+ + D +    +    
Sbjct: 189 VLNKAGGKAYEFVGPSLTDPKWFGDGFGIAVRKQDKDLTKKLDAAI 234


>gi|260598730|ref|YP_003211301.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Cronobacter turicensis z3032]
 gi|260217907|emb|CBA32484.1| Lysine-arginine-ornithine-binding periplasmic protein [Cronobacter
           turicensis z3032]
          Length = 260

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    S                ++ G +     F+   A GD+ GFD
Sbjct: 1   MKKKVLAFSLLLGLSTSASVFAALPQ--------TVRIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I     K  ++  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDLGNEMCKRI---QVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKRQKEIA--FSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    + ++        + ++  
Sbjct: 108 KLYAADSRLIAAKGATIQPTIESLKGKHVGVLQGSTQEAYANEKWR--GKGVDVVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLSAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKNYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E                E+       ++++K   + +V
Sbjct: 226 AELKAAFDKAL------GEIRKDGT-YDKMAKKYFDFNV 257


>gi|148273812|ref|YP_001223373.1| putative polar amino acid ABC transportersubstrate-binding protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147831742|emb|CAN02711.1| putative polar amino acid ABC transporter,substrate-binding protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 282

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 75/233 (32%), Gaps = 15/233 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFD 73
             +     A+ L D+K +G L  G       F+  + +G     G+DV+   A++  +  
Sbjct: 39  GTSGTPAAATSLSDVKAKGELVIGTEGTYSPFSFHEGSGSGALTGYDVEVATAVADKLGV 98

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132
            P    +        F  L++ + D+++     T  R+      F           I+  
Sbjct: 99  KP---VFEETQFDGIFAGLEAGRWDVIANQISITDERKTV--YDFSEPYTVSPGVIIVKG 153

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              GISS + L+G +   Q+ T+    LA    A          E   +     +  R D
Sbjct: 154 SDSGISSFADLAGKTTA-QSLTSNWNELATQSGAK-----VEAVEGFAQAVTLLQQGRVD 207

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A   D              S+  +  +    S  A    +G  +    V    
Sbjct: 208 ATINDR-LTLLDYQKQQGDSDLQVAAETDDPSLSALVFRKGSDDLVTAVDQAL 259


>gi|769791|emb|CAA60102.1| artI [Escherichia coli K-12]
          Length = 244

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 30/250 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   I    +   +          +L+ ++++ +    D T  RE    + F  
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMGGMDITPEREK--QVLFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI-CVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y +   F+  +    +SV QL G  +  VQ GTT +  + D           + ++  
Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVRSVQNGTTHQKFIMDKHPE----ITTVPYDSY 157

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235
           +         R D   GD + ++      D P   V+   +  K      L  A+ QG+T
Sbjct: 158 QNAKLDLENGRIDGVFGDTAVVHEWL--KDNPKLVVVGDKVTDKDYFGTGLGIAVRQGNT 215

Query: 236 EWYNIVSWTH 245
           E    ++   
Sbjct: 216 ELQQKLNTAL 225


>gi|242279755|ref|YP_002991884.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242122649|gb|ACS80345.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 247

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 76/248 (30%), Gaps = 24/248 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K   + +  LI       +            G L    +T    F       G   GF
Sbjct: 1   MKKLLSIIVAALITATMVGTAFA----------GKLTVACDTSFPPFEFKDPATGKHTGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+   A++  I  D       P++       LQS Q+D+          R     + F 
Sbjct: 51  DVELWEAIAKKIGADYD---LQPMDFNGIIPGLQSNQLDVGIAGITIKPERAKV--VDFS 105

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++ K    ++ +  L G  I  +  T++    AD+ K    K    ++  
Sbjct: 106 DGYYNSGLLILVKKDENSVNGIEDLKGKIIATKLSTSS----ADFAKTAGAK-EVKLYPN 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            + +         DA   D   +        +    V+ P + +      A  +G +   
Sbjct: 161 NDAMFMELMTGGADAVIFDSPVIADFMRKAGKGQVKVVGP-LYNGQQYGIAFPKG-SSLV 218

Query: 239 NIVSWTHY 246
             V+    
Sbjct: 219 AKVNAALK 226


>gi|254411623|ref|ZP_05025399.1| Bacterial extracellular solute-binding protein, family 3
           [Microcoleus chthonoplastes PCC 7420]
 gi|196181345|gb|EDX76333.1| Bacterial extracellular solute-binding protein, family 3
           [Microcoleus chthonoplastes PCC 7420]
          Length = 260

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 89/241 (36%), Gaps = 12/241 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V +  + +      S   + L +I++RG L   +   L       A G  +G ++D  R 
Sbjct: 11  VVLGLMGVAVLQPPSAYPAELAEIEQRGQLIVAVKDNLRPLGFRDATGSLQGLEIDIARR 70

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +   P  +   P+  ++R   +   Q+DI       T  R     + F    Y DG
Sbjct: 71  LAKELLGSPEAVVLQPVANRDRLSVVVEDQVDIAIARVTVTDSRARL--VDFSIPYYLDG 128

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            G I +    I+ +S L   +I V  G++T   +             +  +  +E     
Sbjct: 129 AGIITNDAS-INLLSDLDNQTIAVIKGSSTIPVIKYALP----NAQLVGVDSYQEALFLL 183

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWT 244
            A   +A+  D + L           ++ +LP  +S + LA  + +    TE    V+  
Sbjct: 184 EAGEANAFAADQTVLTGWVQQYP---DYRLLPYRLSGAALAIVMPKGLQYTELRQQVNQA 240

Query: 245 H 245
            
Sbjct: 241 I 241


>gi|160943013|ref|ZP_02090251.1| hypothetical protein FAEPRAM212_00490 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445707|gb|EDP22710.1| hypothetical protein FAEPRAM212_00490 [Faecalibacterium prausnitzii
           M21/2]
          Length = 275

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 94/276 (34%), Gaps = 35/276 (12%)

Query: 1   MYKDFFVSI----LCLIILFFTSFST---NASI--------LGDIKKRGFLKCGINTGLV 45
           M +  F+S+        +L  T  S+    AS         L  I+K G L   +     
Sbjct: 1   MKRRTFISLMGVMAAAGVLSLTGCSSKDTAASTASSAPLNKLDSIQKSGKLVVALEGAWQ 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            ++   A+    G+DV+  RA++  +  +P    Y+  +    F  L + + D++    +
Sbjct: 61  PWSYHDASDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRYDMVCNGVE 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164
            T  R  +    F     +      + K    I S   L G +      +T    LA+ +
Sbjct: 118 VTEERAKTYA--FTTPYGYIHTALAVRKDNEDIHSFEDLKGKTTANSLASTYME-LAESY 174

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            A          + +EE      A R DA      + Y     +    +  ++      S
Sbjct: 175 GA-----TVQGIDTLEETIQLLTAGRIDATLNADVSFYDYLNVHPDA-DFKLVAQTAEAS 228

Query: 225 PLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            +A P +   DT + + ++         EEL     
Sbjct: 229 HVAIPVLKSEDTAYLDALNTAI------EELRADGT 258


>gi|256253345|ref|ZP_05458881.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti B1/94]
 gi|261220463|ref|ZP_05934744.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|260919047|gb|EEX85700.1| extracellular solute-binding protein [Brucella ceti B1/94]
          Length = 240

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R D    D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDTVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|319792887|ref|YP_004154527.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315595350|gb|ADU36416.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 270

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 75/273 (27%), Gaps = 22/273 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-------FLKCGINTGLVGFAEVKANG 54
            +    +   L+ L         +                 L  G +     F      G
Sbjct: 5   RRLTLTAASLLVGLALAGCGKQEAAAPAAASAPPPPAAARVLVVGTDAAYAPFESQNEKG 64

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFD+D  +A++     +   ++++    +  F +L     D+L  +   T  R    
Sbjct: 65  EVVGFDIDVVKAVAQKAGIE---VKFVNTPWEGIFNSLDQGDRDLLVSSITITDER--RQ 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F P  +   Q   +     ++    +    + VQ GTT +  +       N      
Sbjct: 120 TMDFSPPYFEARQLIAVKSDSPVAKFDDIKTLKVGVQNGTTGDEVVGKLLGKSNTA--IK 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            FE          A    A   D   +      N       +            A+ +G+
Sbjct: 178 RFESTPLALKELEAGGVQAVVADNGVVAHYLANNAGGGFKTVSDAGFPSEQYGIAVKKGN 237

Query: 235 TEWYNIVSWTH--------YAMVTAEELGITQK 259
            E    +            YA + A   G   K
Sbjct: 238 AELLAKIDKGLADIKADGTYAKIYASHFGAASK 270


>gi|304397411|ref|ZP_07379289.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
 gi|304355029|gb|EFM19398.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
          Length = 263

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 89/241 (36%), Gaps = 21/241 (8%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L + ++   +F   A     I++   ++  ++     F      G   GFD+D   AL +
Sbjct: 12  LAVAVMAGCAFGAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCT 64

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    +K  ++         AL++++ D +  +   T  R     + F    Y      
Sbjct: 65  QM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQINFTVPLYDTHTQL 119

Query: 130 IMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           I  K  GI  +V  L G ++ V+ GT  E      ++ H      + +    ++++   +
Sbjct: 120 IARKGSGILPTVESLKGKTVGVEQGTVQERYALAKWQPHG--VTVVPYGDQAQVESDLVS 177

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243
            R DA   D +      L + +  +   L   I + P+     A  + +GD E    +  
Sbjct: 178 GRLDAVFTDAAQAAIGFLKHPQGKDF-ELAGPIIQDPIIGPGTAIGLRKGDEELKTALDN 236

Query: 244 T 244
            
Sbjct: 237 A 237


>gi|86149797|ref|ZP_01068026.1| cjaC protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839615|gb|EAQ56875.1| cjaC protein [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 251

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++++ L+ LF  + S + +   +      LK G       F     N    GFD
Sbjct: 1   MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++     T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + + L G  I VQ GT     L +              + +
Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                A + ++ DA   D           + P       +       + A  +   + 
Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFCQETDGGEGFSFAFDKNKQKN 223


>gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX0104]
 gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX1322]
 gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           ATCC 29200]
 gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ATCC 4200]
 gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis DS5]
 gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Merz96]
 gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis D6]
 gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis AR01/DG]
 gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis R712]
 gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis S613]
 gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX0104]
 gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           ATCC 29200]
 gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX1322]
 gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ATCC 4200]
 gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis DS5]
 gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Merz96]
 gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis D6]
 gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ARO1/DG]
 gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis R712]
 gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis S613]
 gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis 62]
 gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus faecalis OG1RF]
 gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 722

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F +  S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++     +   +   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A GD+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|119387390|ref|YP_918424.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119377965|gb|ABL72728.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 269

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 97/242 (40%), Gaps = 7/242 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    + L L I+        A +   IK+RG +   I+     +  + +     G DV
Sbjct: 5   RKAATAAGLVLGIVTGLVGPAAADVPAAIKERGKVLIAIDVSHPPYGMLDSQARETGSDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + L+  +      ++ +P++   R  +L S+++D++  +   T  R+    + +   
Sbjct: 65  ETAKLLAEDMG---VALEIVPVSGANRVPSLLSRKVDMVIASFSITEERKKV--IDYSRP 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                      +  GI++ + L+G ++ V  GTT ++ L+   K   +    + +E    
Sbjct: 120 YGVIPVVISAPQDMGIAAPADLAGQALAVARGTTADIELSRIVKESGVNARIVRYEDEAT 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
            + A    +       +S   A +++   P  ++ +   ++  P+A  + +GD E    V
Sbjct: 180 TNTAVATGQQKILAAALST--ANEVSEQNPGLNLEVKLDMAAYPMAVGLRKGDDELKAWV 237

Query: 242 SW 243
             
Sbjct: 238 DE 239


>gi|53719990|ref|YP_108976.1| putative histidine-binding periplasmic protein precursor
           [Burkholderia pseudomallei K96243]
 gi|53725264|ref|YP_102388.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|67641795|ref|ZP_00440562.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei GB8 horse 4]
 gi|76809716|ref|YP_334223.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710b]
 gi|121600313|ref|YP_993723.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei SAVP1]
 gi|124385987|ref|YP_001028819.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126449003|ref|YP_001081270.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|126454248|ref|YP_001067028.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1106a]
 gi|167001097|ref|ZP_02266898.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei PRL-20]
 gi|167720493|ref|ZP_02403729.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei DM98]
 gi|167739479|ref|ZP_02412253.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 14]
 gi|167816688|ref|ZP_02448368.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 91]
 gi|167825092|ref|ZP_02456563.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 9]
 gi|167846595|ref|ZP_02472103.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei B7210]
 gi|167895180|ref|ZP_02482582.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 7894]
 gi|167903564|ref|ZP_02490769.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911812|ref|ZP_02498903.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 112]
 gi|167919814|ref|ZP_02506905.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei BCC215]
 gi|217420404|ref|ZP_03451909.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 576]
 gi|226199966|ref|ZP_03795516.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813138|ref|YP_002897589.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei MSHR346]
 gi|242317880|ref|ZP_04816896.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1106b]
 gi|254178236|ref|ZP_04884891.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 10399]
 gi|254184263|ref|ZP_04890853.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1655]
 gi|254191297|ref|ZP_04897801.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254195866|ref|ZP_04902292.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei S13]
 gi|254199287|ref|ZP_04905653.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei FMH]
 gi|254205597|ref|ZP_04911949.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei JHU]
 gi|254258072|ref|ZP_04949126.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1710a]
 gi|254296923|ref|ZP_04964376.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 406e]
 gi|254357758|ref|ZP_04974031.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei 2002721280]
 gi|52210404|emb|CAH36385.1| putative histidine-binding periplasmic protein precursor
           [Burkholderia pseudomallei K96243]
 gi|52428687|gb|AAU49280.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|76579169|gb|ABA48644.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710b]
 gi|121229123|gb|ABM51641.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei SAVP1]
 gi|124294007|gb|ABN03276.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126227890|gb|ABN91430.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1106a]
 gi|126241873|gb|ABO04966.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|147748883|gb|EDK55957.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei FMH]
 gi|147753040|gb|EDK60105.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei JHU]
 gi|148026885|gb|EDK84906.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei 2002721280]
 gi|157806747|gb|EDO83917.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 406e]
 gi|157938969|gb|EDO94639.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160699275|gb|EDP89245.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 10399]
 gi|169652611|gb|EDS85304.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei S13]
 gi|184214794|gb|EDU11837.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1655]
 gi|217395816|gb|EEC35833.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 576]
 gi|225928022|gb|EEH24059.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237502755|gb|ACQ95073.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei MSHR346]
 gi|238522783|gb|EEP86225.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei GB8 horse 4]
 gi|242141119|gb|EES27521.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1106b]
 gi|243063051|gb|EES45237.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei PRL-20]
 gi|254216761|gb|EET06145.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1710a]
          Length = 264

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     K  ++         ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R     + F    Y      I  K  G + + + L G  I V  
Sbjct: 87  ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRIGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +      ++ R DA   D  A     L+  + +
Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                 D +S + +        + + D +  + V+    
Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGMRKNDAQLKSAVNQALK 241


>gi|317125234|ref|YP_004099346.1| amino acid ABC transporter substrate-binding protein
           [Intrasporangium calvum DSM 43043]
 gi|315589322|gb|ADU48619.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 274

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 87/257 (33%), Gaps = 24/257 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53
           M   +   V+I  +  L   +  ++          G      +K GI     G       
Sbjct: 1   MKLRRTSAVAIATVAALGLAACGSDGG------NSGAAGGDKVKVGIKFDQPGLGLKTGA 54

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
             + GFDVD    ++  +  D   ++++   + +R   L++ Q+  +      T  R   
Sbjct: 55  -TYSGFDVDVANFIAKELNLD---VEFVEAVSAQRETLLKTGQVKYIVGTYSITEKR--M 108

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYH 172
             ++F    +  GQ  ++       +    L G  +C   G+T+   + D         +
Sbjct: 109 ADVSFAGPYFIAGQDLLVRSDDTSITGKDTLDGKKLCSVKGSTSAQKIKDEIP----GVN 164

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +        A ++   DA T D + L      +    +  ++ +  S       + +
Sbjct: 165 LQEYNTYSLCVDALKSGAVDALTTDDTILAGYAAQDTNKGKLKVVGNKFSTENYGVGVKK 224

Query: 233 GDTEWYNIVSWTHYAMV 249
           GDTE+ N V       +
Sbjct: 225 GDTEFCNQVVTALKKFI 241


>gi|294497335|ref|YP_003561035.1| L-cystine import ABC transporter L-cystine-binding protein TcyA
           [Bacillus megaterium QM B1551]
 gi|294347272|gb|ADE67601.1| L-cystine import ABC transporter, L-cystine-binding protein TcyA
           [Bacillus megaterium QM B1551]
          Length = 273

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 13/229 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S+   +   +KK G L  G       F          GFDV+  + ++  +        +
Sbjct: 36  SSQGDLYNKVKKDGVLTIGTEGTYPPFTFHDDKQKLTGFDVELAQEVAKRLGVKAE---F 92

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139
                   F  L +K+ D+++         +      F       G   I+ K +  I S
Sbjct: 93  KETQWDGMFAGLDAKRFDMIANEVGI--REDRQKKYDFSDPYIQSGAVLIVRKDEKDIKS 150

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G     Q+ T+    +A  + A+         E   +      A+R DA   D  
Sbjct: 151 FKDLKGKKSA-QSLTSNYKDMAQSYGAN-----ITSAEGFAQAVELMSANRVDATINDKL 204

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +    K  +       I  +    +       +   +  + V+     M
Sbjct: 205 SFLDYKKKHPNAP-IKIADEKSDGAASGFMFRKDSGKLVDEVNKALKDM 252


>gi|82751513|ref|YP_417254.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           RF122]
 gi|82657044|emb|CAI81481.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           RF122]
          Length = 485

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 95/283 (33%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++ G         V 
Sbjct: 2   KCLIRFILVLGLLISSAMGYINPTAHAEQDQTWDKIKERGELRVGLSAGYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      TL R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTLERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +A   +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEAAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|269139579|ref|YP_003296280.1| arginine 3rd transport system periplasmic binding protein
           [Edwardsiella tarda EIB202]
 gi|267985240|gb|ACY85069.1| arginine 3rd transport system periplasmic binding protein
           [Edwardsiella tarda EIB202]
 gi|304559467|gb|ADM42131.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Edwardsiella tarda FL6-60]
          Length = 244

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++   +  L F++ +              ++   +     F  + A+ +  GFD
Sbjct: 1   MKK--LLACAIVAALSFSAQAAEN-----------IRFASSATYPPFESLDASNNIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R+  +   F  
Sbjct: 48  IDLAKALCQEM---KANCTFNNQAFDSLITALKFKRYDAVISGMDITPERQKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     +++ + G  + ++ GTT +  L D          P+ ++  +
Sbjct: 103 PYYANSAIIIAQK-DKYHTIADMKGLRVGMENGTTHQKYLQDKHPE----IKPVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +      N +       +         L  A+   +    
Sbjct: 158 NAILDLKNGRIDGVFGDTAVVNEWLKNNPQLEAVGEHVTDPQYFGIGLGIAVRPDNQALL 217

Query: 239 NIVSWTHYAM 248
           + ++    A+
Sbjct: 218 DQLNQALAAI 227


>gi|238758199|ref|ZP_04619378.1| Amino acid-binding protein [Yersinia aldovae ATCC 35236]
 gi|238703529|gb|EEP96067.1| Amino acid-binding protein [Yersinia aldovae ATCC 35236]
          Length = 262

 Score =  115 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 84/246 (34%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +   CL  +   S +  A              G       F    +    +GFD
Sbjct: 1   MFKRLILVGTCLAAVLSASATMAAEP--------TYVVGSGGTYRPFEYENSQKQLEGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   D  +++ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 53  IDIIKAIAKA---DGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   + S++ L   ++ V   +T ++ ++D    +        F+   
Sbjct: 108 PYFPAEQTIVVAKGSKVDSIAALKNLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+        T+   +  ++      +     A+ +G+ E  N 
Sbjct: 166 LMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFELVSDTKFERQYFGIAVAKGNDELRNK 225

Query: 241 VSWTHY 246
           ++    
Sbjct: 226 INNGLQ 231


>gi|256157682|ref|ZP_05455600.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M490/95/1]
 gi|265996187|ref|ZP_06108744.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|262550484|gb|EEZ06645.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
          Length = 242

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 18/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +A  ++ R D    D   +      +      +I     +++  A A+  GD +  
Sbjct: 165 ADEANADLKSGRLDTVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224

Query: 239 NIVSWTHY 246
              +    
Sbjct: 225 EQFNAAIK 232


>gi|126458803|ref|YP_001055081.1| extracellular solute-binding protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126248524|gb|ABO07615.1| extracellular solute-binding protein, family 3 [Pyrobaculum
           calidifontis JCM 11548]
          Length = 299

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 9/238 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + S     +  IKKRG L  G +     +  V+ N +  G+D+D  R ++ A+     ++
Sbjct: 57  AASQCPVSVDVIKKRGKLILGTDATWPPWEWVRGN-EIVGWDIDIAREIAKALG---VQL 112

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGI 137
           +   +       A+++  +D+      WT  RE    L F    Y +    +   K+  I
Sbjct: 113 EVRDMRFAGLLEAVRNGDVDLALSAITWTSEREKV--LEFSMPYYLESVVVVTLAKRTDI 170

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + V  L G ++ VQ GTT E   A+  +           +    +    R    DA   D
Sbjct: 171 NRVEDLYGKTVGVQIGTTHEEWAAENLEKPGKAAVRRYDKVYPYMVEVLRRGDVDAIILD 230

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            S   AL            +P       ++ A+ +   +   +V      ++    L 
Sbjct: 231 RSIATALVRKFPDLKISFEIPGTAG--YISVAMPKCAQDLKLVVDQVIENLMQTGRLD 286


>gi|323492516|ref|ZP_08097664.1| hypothetical protein VIBR0546_15806 [Vibrio brasiliensis LMG 20546]
 gi|323313303|gb|EGA66419.1| hypothetical protein VIBR0546_15806 [Vibrio brasiliensis LMG 20546]
          Length = 256

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 77/224 (34%), Gaps = 14/224 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +   K+   ++ GI      F+  +A+G  KGFDVD   AL   +     K + +  +  
Sbjct: 18  VAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCQEM---EVKCKIVAQDWD 74

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               +L +++ D +      T  R+    + F          FI  K  G+     L G 
Sbjct: 75  GIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFDNLDGQ 131

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I VQ  TT +  L D +     K   + +   +E        R  A  GD SAL    L
Sbjct: 132 KIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188

Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
                  +  +   ++           A+ + D +    +    
Sbjct: 189 NKAGGEAYEFVGPSLTDPKWFGDGFGIALRKQDKDLTKKLDAAI 232


>gi|291482760|dbj|BAI83835.1| hypothetical protein BSNT_00642 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 268

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      + + I    +              +  +   IKK+G L  G       F  
Sbjct: 1   MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              +     G+DV+    ++  +     K+ +        F  L SK+ D+++     T 
Sbjct: 61  HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWDSMFAGLNSKRFDVIANQVGKT- 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +      F           +  K    I S + + G +   Q+ T+    LA    A 
Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    E + +     +  R D    D  A+     T+   +  +       +S   
Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGDPQSTY- 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               +G  E  + V+     M  
Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250


>gi|28900492|ref|NP_800147.1| arginine ABC transporter periplasmic arginine-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|260365645|ref|ZP_05778166.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           K5030]
 gi|260877445|ref|ZP_05889800.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           AN-5034]
 gi|260898926|ref|ZP_05907367.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           Peru-466]
 gi|260901240|ref|ZP_05909635.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           AQ4037]
 gi|28808872|dbj|BAC61980.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089190|gb|EFO38885.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           Peru-466]
 gi|308090773|gb|EFO40468.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           AN-5034]
 gi|308106806|gb|EFO44346.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           AQ4037]
 gi|308111454|gb|EFO48994.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           K5030]
 gi|328470442|gb|EGF41353.1| arginine ABC transporter periplasmic arginine-binding protein
           [Vibrio parahaemolyticus 10329]
          Length = 247

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 86/257 (33%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ LI     + +              +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLTSLIGLISANVAANAVAQD---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCKEM---DAKCSFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 107 AYYDNSAAFVSIK-DKVADQNALEGKRVGVQNGSTHQSYLIEQMP----GVTSVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGERVTNPKYFGNGFGIAVNKGNDELV 221

Query: 239 NIVSWTHYAMVTAEELG 255
           N ++    A+    E  
Sbjct: 222 NKLNTALEAVKANGEYD 238


>gi|126438726|ref|YP_001059743.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 668]
 gi|126218219|gb|ABN81725.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 668]
          Length = 264

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 75/218 (34%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     K  ++         ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R     + F    Y      I  K  G + + + L G  I V  
Sbjct: 87  ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRIGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +      ++ R DA   D  A     L+  + +
Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
                 D +S + +        + + D +  + V+   
Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGMRKNDAQLKSAVNQAL 240


>gi|50121973|ref|YP_051140.1| histidine-binding periplasmic protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612499|emb|CAG75949.1| histidine-binding periplasmic protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 259

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 95/279 (34%), Gaps = 29/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V  L LI+          S + +I K   +K G +     F    A+G+  GFD
Sbjct: 1   MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +   ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 52  IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  +++ L G  + V   +T E      ++        + ++  
Sbjct: 107 KLYAANARLIAKKGASIEPTLASLGGKRVGVLQASTQEAFANANWQPKG--VEVVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   A R DA   D  A     L  D   ++      +             + + D
Sbjct: 165 DLIYADLSAGRIDAAFQDEVAGSEGFLKLDMGKDYAFAGPAVKDDKFFGVGTGMGLRKAD 224

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE    +     AM             +  +K   + DV
Sbjct: 225 TELKAALDKAFDAM-------RKDGTYDTFAKKYFDFDV 256


>gi|121604972|ref|YP_982301.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120593941|gb|ABM37380.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 255

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 87/245 (35%), Gaps = 13/245 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   F  + L    LF  + + +A +L DI++   ++  ++TG   +  V       G
Sbjct: 1   MKKTSLFLRTALAGAALFAFAGAAHADLLKDIREAKKIRIAVDTGSPPYGFVDDALKPVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+  + L+  +      ++ +   +  R   LQ+ + DI+  +   T  RE    + F
Sbjct: 61  SDVETAQLLAQDLG---VALEMVQTTSPNRIPFLQTGKADIVVASLSVTPEREKV--VDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                         K   I     L G  +    G+  +       K   M    + ++ 
Sbjct: 116 STPYAQILAVVAGPKAVSIKGFDDLQGKRVATTRGSNNDRVATLGAKGAQM----VRYDD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +  A  + + D      + + A+      P + ++   ++   PL   + + + E  
Sbjct: 172 DATLVTAAVSGQADIIATSPAIVNAVL--GKSPQKDLVTKFVMQTVPLGIGMRKNEPELK 229

Query: 239 NIVSW 243
             ++ 
Sbjct: 230 AWLND 234


>gi|161519896|ref|YP_001583323.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189353926|ref|YP_001949553.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160343946|gb|ABX17031.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189337948|dbj|BAG47017.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 260

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ S  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKDASGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++  +      AL++++ D +  +   T  R+  +   F  
Sbjct: 53  VDLGNEICRRL---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +   L G SI V+ GT  E     Y+         + ++  
Sbjct: 108 KLFNTPTRLVAKKGSGLMPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +++ A   A R D    D        L   R +        +             + + D
Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGANFDFAGKDLDDPKTLGEGAGIGLRKED 225

Query: 235 TEW 237
           T+ 
Sbjct: 226 TDL 228


>gi|320327366|gb|EFW83380.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330881566|gb|EGH15715.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 273

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MKYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQILGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|301024141|ref|ZP_07187851.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 69-1]
 gi|284922298|emb|CBG35383.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli 042]
 gi|300396685|gb|EFJ80223.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Escherichia coli MS 69-1]
          Length = 260

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      E       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKEFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|227891055|ref|ZP_04008860.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus salivarius ATCC 11741]
 gi|227867144|gb|EEJ74565.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus salivarius ATCC 11741]
          Length = 291

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 17/255 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAEVK 51
           K     I CL+       +         +  G               G++   V     +
Sbjct: 8   KKIVKIITCLLAFLIVGATLAGCTNVRKRANGQDNWKKIEKKKKVVIGLDDSFVPMGFRE 67

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GFDVD  R +      D   + +  ++   +   L++  ID++         R+
Sbjct: 68  KDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPERK 124

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMK 170
            ++   F      + Q  +  KK+ +     + G ++ +Q+G++  E  ++      N  
Sbjct: 125 KTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKNYV 182

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              + ++          A+R      D             P+ + I          A  +
Sbjct: 183 KEAVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAVGM 242

Query: 231 IQGDTEWYNIVSWTH 245
            +GD      ++   
Sbjct: 243 RKGDKTLQKKINVAL 257


>gi|15802857|ref|NP_288884.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli O157:H7 EDL933]
 gi|15832448|ref|NP_311221.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|168748162|ref|ZP_02773184.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|168755065|ref|ZP_02780072.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|168761249|ref|ZP_02786256.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|168767939|ref|ZP_02792946.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|168772961|ref|ZP_02797968.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|168780168|ref|ZP_02805175.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|168787220|ref|ZP_02812227.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC869]
 gi|168798483|ref|ZP_02823490.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC508]
 gi|195935689|ref|ZP_03081071.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EC4024]
 gi|208809204|ref|ZP_03251541.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208813287|ref|ZP_03254616.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208820048|ref|ZP_03260368.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209399107|ref|YP_002271719.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|217327395|ref|ZP_03443478.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|254794203|ref|YP_003079040.1| lysine/arginine/ornithine ABC transporter periplasmic-binding
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|261223235|ref|ZP_05937516.1| lysine/arginine/ornithine transporter subunit, periplasmic-binding
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259215|ref|ZP_05951748.1| lysine/arginine/ornithine transporter subunit, periplasmic-binding
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283551|ref|YP_003500369.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli O55:H7 str. CB9615]
 gi|12516669|gb|AAG57439.1|AE005463_2 lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli O157:H7 str. EDL933]
 gi|13362664|dbj|BAB36617.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|187771168|gb|EDU35012.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|188017337|gb|EDU55459.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|189002105|gb|EDU71091.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357571|gb|EDU75990.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362920|gb|EDU81339.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|189368356|gb|EDU86772.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|189372974|gb|EDU91390.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC869]
 gi|189378927|gb|EDU97343.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC508]
 gi|208729005|gb|EDZ78606.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208734564|gb|EDZ83251.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740171|gb|EDZ87853.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209160507|gb|ACI37940.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|209764868|gb|ACI80746.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli]
 gi|209764870|gb|ACI80747.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli]
 gi|209764872|gb|ACI80748.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli]
 gi|209764874|gb|ACI80749.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli]
 gi|209764876|gb|ACI80750.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Escherichia coli]
 gi|217319762|gb|EEC28187.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|254593603|gb|ACT72964.1| lysine/arginine/ornithine transporter subunit, periplasmic-binding
           component of ABC superfamily [Escherichia coli O157:H7
           str. TW14359]
 gi|290763424|gb|ADD57385.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli O55:H7 str. CB9615]
 gi|320192066|gb|EFW66711.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli O157:H7 str. EC1212]
 gi|320641138|gb|EFX10617.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Escherichia coli O157:H7 str. G5101]
 gi|320646526|gb|EFX15445.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Escherichia coli O157:H- str. 493-89]
 gi|320651623|gb|EFX20003.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Escherichia coli O157:H- str. H 2687]
 gi|320663077|gb|EFX30394.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667895|gb|EFX34803.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Escherichia coli O157:H7 str. LSU-61]
 gi|326339663|gb|EGD63474.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli O157:H7 str. 1125]
 gi|326344125|gb|EGD67886.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Escherichia coli O157:H7 str. 1044]
          Length = 260

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|83720746|ref|YP_442315.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|167581209|ref|ZP_02374083.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis TXDOH]
 gi|167619295|ref|ZP_02387926.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis Bt4]
 gi|257138512|ref|ZP_05586774.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|83654571|gb|ABC38634.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
          Length = 264

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     K  ++         ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R     + F    Y      I  K  G + + + L G  + V  
Sbjct: 87  ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +      ++ R DA   D  A     L+  + +
Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                 D +S + +        + + D +  + V+    
Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGLRKNDAQLKSAVNQALK 241


>gi|291459897|ref|ZP_06599287.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417238|gb|EFE90957.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 271

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 32/274 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRG-----FLKCGIN 41
           M K    ++  +  L   + +++A+                G+ K  G      L    N
Sbjct: 1   MKKILAAAMAVVTALSLGACASSAAKSGGTESAKDTSSESAGEAKAEGSYAGKTLIMATN 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                +   +   D  G DV+  +A++  +    +K +   +       A+ S + D  +
Sbjct: 61  AEFPPYEYHEGK-DIVGIDVEIAKAVAEQMG---AKFEVSDMAFDAIISAVDSGKADFGA 116

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  R+    + F        Q  I+ +   I S+  L G  I VQ GTT ++   
Sbjct: 117 AGMTVTEDRKK--NVDFSDTYATSVQSVIVPENSDIKSIDDLKGKKIGVQQGTTGDIYAT 174

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             +           F +  +   A  A + DA   D       K          +L    
Sbjct: 175 KDYGK----DAIQPFPKGVDAVLALGAGKVDAVIID---GNTAKAFVADQKGLKLLDSAY 227

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++   A  + +G+TE  + ++     +  + +L 
Sbjct: 228 AEEEYAICVKKGNTELRDGINAALKELKASGKLD 261


>gi|325496650|gb|EGC94509.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii ECD227]
          Length = 260

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|238019865|ref|ZP_04600291.1| hypothetical protein VEIDISOL_01741 [Veillonella dispar ATCC 17748]
 gi|237863389|gb|EEP64679.1| hypothetical protein VEIDISOL_01741 [Veillonella dispar ATCC 17748]
          Length = 266

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 14/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K      L  +                 ++ G L+ G  T    F   + +  + GFDV
Sbjct: 10  FKKLTAIALVAVAAMGLLAGCGNDKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++  +     K+++  +       A+QS  ID+++   + T  RE    L F  +
Sbjct: 69  DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 123

Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +      I ++ +L+G ++  Q GT                      +  
Sbjct: 124 YFDQGGFITVVRKDNTTIHNMDELAGHTVGAQIGTIPVEMAQKI-----PNTTVKQIDSN 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I    +A   D    D  A+    L      +  ++ +          + +G+     
Sbjct: 179 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADQDLKLVGEPTKAEGTVLGVKKGNKALQE 237

Query: 240 IVSWTHYAMVT 250
            V+     +  
Sbjct: 238 AVNKALKELKE 248


>gi|311106035|ref|YP_003978888.1| extracellular solute-binding protein, family 3 family protein 4
           [Achromobacter xylosoxidans A8]
 gi|310760724|gb|ADP16173.1| bacterial extracellular solute-binding protein, family 3 family
           protein 4 [Achromobacter xylosoxidans A8]
          Length = 247

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 13/212 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++   +        V  +G   GFD++   AL+ A+      ++++ ++ K    ALQ+
Sbjct: 28  TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAGAMGKK---VEWIDIDFKGLIPALQA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + DI       T  R     + F    Y  G   +  K   + ++  L G  + VQ GT
Sbjct: 84  GRADIAVSAIYITPERAKV--VDFTDPYYAGGLVVMTKKDGPVKTLKDLDGRKVSVQVGT 141

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L +++ A       +  E+ +E+    +  R +A      A      +     + 
Sbjct: 142 KSVNYLKEHYPA----VQRVEVEKNQEMFNLVQIGRAEAAVTGKPAAKLFAQSTP---DL 194

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            +L D I+      A+ +   E    ++    
Sbjct: 195 TVLNDQITTEDYGIAVPKNKPELTRELNAALQ 226


>gi|70733436|ref|YP_263211.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68347735|gb|AAY95341.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 273

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 79/253 (31%), Gaps = 24/253 (9%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCR 65
           +  L L +L  +S +   + L  I+++  L  G+       F+ +       GFDVD  +
Sbjct: 6   LLALGLTVLAASSQAFAGATLERIEQKKEL-VGVLMESYPPFSFLNEQNQLDGFDVDVAK 64

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +     +++    +         S + DI   +   +  R       F    Y  
Sbjct: 65  AVADKLG---VRLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVQYYAS 119

Query: 126 GQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN----------MKYHPI 174
                +  K + I     LS   + + A ++ E  L                        
Sbjct: 120 PAVIVVNAKDERIHGAQDLSDKKVGLTAASSYEGYLNKNLVIEGAEDTHLQYPFENVQIA 179

Query: 175 VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            ++               R DA   +   L   +    + S   +  + +   P + AI 
Sbjct: 180 PYDTDNVAFQDLGLGPGVRLDAILTN---LVTAQPRLTQDSRFKLAGEPLYAEPNSVAIE 236

Query: 232 QGDTEWYNIVSWT 244
           +GD +W   V   
Sbjct: 237 KGDAQWNAKVREV 249


>gi|240950026|ref|ZP_04754334.1| amino acid ABC transporter, substrate-binding protein
           [Actinobacillus minor NM305]
 gi|240295504|gb|EER46247.1| amino acid ABC transporter, substrate-binding protein
           [Actinobacillus minor NM305]
          Length = 260

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  L  + L  ++ S    S+L  I  +G +  G       F     +G   G+
Sbjct: 1   MLKKLSVIALTTLALATSATSFAKESLLERINNKGTITVGTEGTYAPFTYHDESGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      +++   N       L++ + D+++     T   E        
Sbjct: 61  DVEVTRAIADKLGVK---VEFKETNWDSMLAGLKADRFDLVANQVALT-SPERQATFDKT 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G      K    I  V  + G     Q+ T+    LA  ++A       +  + 
Sbjct: 117 EPYNWSGAVLAAPKDETRIKKVEDVKGLK-AAQSLTSNYGELARKYEA-----VIVPVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +        R D +T + S      L  +  S+  I  +   K        +G+ E  
Sbjct: 171 LAQSVKVIETKRAD-FTFNDSLAVLDYLKKNPKSDLKIFWESSDKVGAGLVANKGNQEAL 229

Query: 239 NIVSWTH 245
           + +S   
Sbjct: 230 DKISAVI 236


>gi|17230921|ref|NP_487469.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp.
           PCC 7120]
 gi|17132562|dbj|BAB75128.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp.
           PCC 7120]
          Length = 271

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 97/243 (39%), Gaps = 12/243 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              +I+   ++  T    +A+ + +I++RG++   +   L       A+G  +G ++D  
Sbjct: 17  ILSAIIICFMISATGLVASAAEMPEIQRRGYITVAVKDNLPLLGFKDADGKLQGLEIDLA 76

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L++ +      ++  P++ ++R   + + ++DI       T  R     ++F    Y 
Sbjct: 77  KRLAADLLGKADAVKLQPVSNRDRLSVVFNHKVDIAIARVTATESRSRL--VSFSVPYYM 134

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DG   I  K   +  ++ L+   I V   ++T   +  Y          +     +E  A
Sbjct: 135 DGTYLIT-KDATVQQINDLAKRKIAVLNNSSTIAEVRYYIPKA----ELVGVNSYQEAQA 189

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVS 242
           A   +   A+  D S L      +    ++ +LP  +S +PL+  + +     E    ++
Sbjct: 190 AIENNSVAAFAADGSLLSGWVREHP---QYRLLPTKLSTAPLSVVMPKGLQYDELRREIN 246

Query: 243 WTH 245
              
Sbjct: 247 EAI 249


>gi|238785180|ref|ZP_04629173.1| Extracellular solute-binding protein family 3 [Yersinia bercovieri
           ATCC 43970]
 gi|238713928|gb|EEQ05947.1| Extracellular solute-binding protein family 3 [Yersinia bercovieri
           ATCC 43970]
          Length = 265

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 88/253 (34%), Gaps = 17/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L   ++      +  +    I+    +  G++ G   F  +  +G+  GFD
Sbjct: 4   MKKTL--AALLTGMILSAPMLSATAAAAAIE---TISFGVDGGYPPFDVLSPSGEITGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  ++    +    AL +++ D +  +   T  R+    + F  
Sbjct: 59  IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTD 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K    +  V+ L G ++ VQ G+  E     ++         + +   
Sbjct: 114 RYYRSAAQLVARKGSPLLPEVASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
           + +     + R +A   D     +  +   R  +      +I    +      A+ + + 
Sbjct: 172 DNVYLDLLSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDDTISSDVGIAVGKDNP 231

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 232 ALRDALNGAIKAI 244


>gi|322420356|ref|YP_004199579.1| family 3 extracellular solute-binding protein [Geobacter sp. M18]
 gi|320126743|gb|ADW14303.1| extracellular solute-binding protein family 3 [Geobacter sp. M18]
          Length = 264

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 80/249 (32%), Gaps = 22/249 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M+K        +C++ L   + S        ++    L  G+      F     +G   G
Sbjct: 1   MFKGIGWLSLFVCILALPLLAPSP-------VRAEKPLVVGMELAYPPFEMTDTSGKPDG 53

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
             V     L  A+      ++   +       AL++ +ID++  +   T  R     + F
Sbjct: 54  VSVQLAYELGKALG---RPVKIKNMAFDGLIPALKTGKIDLIISSMTATAERAR--SIDF 108

Query: 119 RPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                  G   ++ K    + + +L   G +I V+ GTT     A + +        +V 
Sbjct: 109 SDPYLTTGLCLLVRKSLPANDIEELDQPGRTIAVKKGTTGHSYAAAHLR----NASVLVL 164

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++           + DA+  D  + Y         +    +         A  I +G+ +
Sbjct: 165 DKEAAAVLEVVQGKADAFIYDQMSTYRHYQR--NKATTRAILKPFQTESWAIGIRKGNDD 222

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 223 LKAKINRFL 231


>gi|242279378|ref|YP_002991507.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242122272|gb|ACS79968.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 277

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 22/249 (8%)

Query: 6   FVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
             + + ++ L    ++ +A       S L  + KR  L+ G +T    +A    NG++ G
Sbjct: 11  ITTAILIMGLSSAVWAGDARQNLSQDSTLEKVLKRETLRVGFST-FKPWAMKGKNGEFIG 69

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  + L+S +      ++++P        AL + + DI+      T  R  +L + F
Sbjct: 70  FEIDVAKRLASDMGVK---VRFIPTKWDGIIPALLTGKFDIIIGGMGITPKR--NLKVNF 124

Query: 119 RPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPI 174
                F G   + +K    G SS++  + A   V     TT E    ++          +
Sbjct: 125 SDPYEFSGMSIVANKDVAAGKSSLADFNNAETRVSVRLGTTAEKAAKNFLPKAK----IL 180

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F             +             L         ++ L    +  P+  A+ +GD
Sbjct: 181 KFNDEAASIQELLNGKAACLVASNPLPETLAKKYP-GKLYLPLQADFTSEPIGFAVRKGD 239

Query: 235 TEWYNIVSW 243
            ++ N ++ 
Sbjct: 240 PDFLNYLNN 248


>gi|167584860|ref|ZP_02377248.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ubonensis Bu]
          Length = 260

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 23/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ S  A      K    ++ G++     F     +G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKGPDGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++  +      AL++++ D +  +   T  RE  +   F  
Sbjct: 53  VDLGNEICRRL---SAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPAREEQIA--FSA 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   +   V  + G  I V+ GT  E     Y+         + ++  
Sbjct: 108 KLFNTPTRLVAKKGSSLMPDVKSVKGHRIGVEQGTIQETYAKTYWAPAG--ATVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233
           +++ A   A R D    D        L   R  +   +       P          + + 
Sbjct: 166 DQVYADLIAGRLDGALQDAVQADIGFLKTPRGKDFQFVG-TDLDDPKTLGNGAGIGLRKE 224

Query: 234 DTEWYNIVSWTH 245
           DT+    +    
Sbjct: 225 DTDLKAKIDKAI 236


>gi|51243941|ref|YP_063825.1| substrate-binding periplasmic protein (FliY) [Desulfotalea
           psychrophila LSv54]
 gi|50874978|emb|CAG34818.1| similar to substrate-binding periplasmic protein (FliY)
           [Desulfotalea psychrophila LSv54]
          Length = 275

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 25/256 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEV 50
           M   K  F ++  L I+   +   +        +S++  I+K+  L+ G++     +A  
Sbjct: 1   MKVQKIAFFTLALLCIMMLGTVQASQIQGDITRSSVISKIQKKRVLRVGMDV-FQPWAMK 59

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+  GF++D  R L+  +     +++++P        AL + + D+L      T  R
Sbjct: 60  NKKGELVGFEIDVARRLAKDMG---VRVEFVPTPWSGIVPALLTGKFDVLIGGIGITSKR 116

Query: 111 EISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
             +L + F     + G G + H    K              I V+ GT+       Y   
Sbjct: 117 --ALKVNFTIPYDYSGMGIVAHRKLAKGFSSIEDFNRPEIEIAVKLGTSAVTATKKYMPR 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                   +F+   +     R  +  A  G         L          + D  S+ P+
Sbjct: 175 AK----LRMFDTEIQAYQELRNGKVAAVVGSAPRPVYEALDYQD-ILFNPIADTFSQEPI 229

Query: 227 APAIIQGDTEWYNIVS 242
           A A+ +GD +     +
Sbjct: 230 AFALRKGDPDALAFFN 245


>gi|330964979|gb|EGH65239.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 273

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 78/251 (31%), Gaps = 20/251 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +  + L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFDVD  +A
Sbjct: 6   LLCIGLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFDVDVAKA 65

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +      ++    +         S + DI   +   +  R                
Sbjct: 66  VAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VEYYASPA 121

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------VF 176
              +      I S   LSG  + + + ++ E  L         +  P+           +
Sbjct: 122 VIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDDVQIAPY 181

Query: 177 ERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +               R DA   +   L   K   D+     +  + + + P + AI + 
Sbjct: 182 DNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNSVAIEKD 238

Query: 234 DTEWYNIVSWT 244
           D EW   V   
Sbjct: 239 DPEWDAKVREV 249


>gi|257428635|ref|ZP_05605033.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431272|ref|ZP_05607649.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433952|ref|ZP_05610310.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436868|ref|ZP_05612912.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus M876]
 gi|282914654|ref|ZP_06322440.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282924999|ref|ZP_06332665.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C101]
 gi|293503725|ref|ZP_06667572.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510746|ref|ZP_06669451.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus M809]
 gi|293537288|ref|ZP_06671968.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|257275476|gb|EEV06963.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278220|gb|EEV08868.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257282045|gb|EEV12182.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284219|gb|EEV14342.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus M876]
 gi|282313365|gb|EFB43761.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C101]
 gi|282321835|gb|EFB52160.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|290920133|gb|EFD97201.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291095391|gb|EFE25656.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291466637|gb|EFF09158.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus M809]
          Length = 485

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 93/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L  ++         +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPAAYAEQDQKWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNDYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGVVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T  A+     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKAVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|326202621|ref|ZP_08192489.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
 gi|325987205|gb|EGD48033.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
          Length = 270

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           M K     I CL+I+       +       +  I+K G L  G +     +     V   
Sbjct: 1   MKKGLLKRIFCLLIVATIGISIAGCGGGETMKRIEKTGKLVVGTSGDYAPYEYHMLVDGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D+     ++  +     + Q +  +      +L + ++DI+          +  
Sbjct: 61  DTIVGIDISIVEEIAKDMG---VQFQIVDADFNGLLSSLNTNKVDIVIAGM--NPDEKRK 115

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F  I Y   QG ++  +      +V+ L    +  Q GTT E  + +  K  N   
Sbjct: 116 KSVDFSKIYYEAKQGVMVRAEDKDKYKTVADLKDKKVGAQLGTTQEKIVQEQIKGAN--- 172

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +   ++ ++    +  + DA   ++    +  + N+       +P        A A+ 
Sbjct: 173 -LVSLGKIPDLVMELKNKKIDALVVELPV-ASGYVKNNNDLALTNVPVKDDTGGSAIAVK 230

Query: 232 QGDTEWYNIVSWTH 245
           +G++   + ++ T 
Sbjct: 231 KGNSNLVDKINKTL 244


>gi|228956817|ref|ZP_04118602.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802858|gb|EEM49691.1| Amino acid ABC transporter, solute binding protein [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 264

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +     V+ + L   F     +  S           +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNSEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|159027770|emb|CAO89640.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 260

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 12/228 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
             + ++ L  I +RG L   +   L   A + + G+ +G ++D  + L+S I    S I 
Sbjct: 16  APSFSADLDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLASEILGSDSAII 75

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
             P++ +ER   +   ++D+       T  R+    + F P  Y D  GF+  K   +  
Sbjct: 76  LKPVSNQERLQVVIDDRVDLAIARVAITPARQRL--VDFSPFYYLDSSGFVT-KNPQLQR 132

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  L+ + I V  G+TT   +    +++            +E          DA+  D S
Sbjct: 133 LEDLANSRIAVLNGSTTIALV----RSNLPNAILRGVASYQEALNLLETGEIDAFAADNS 188

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTH 245
            L            +  LP  +    L   + +          V+   
Sbjct: 189 LLTGWVQQFPN---YRQLPIELGAIALGVVLPKGLQYQSLRERVNQAI 233


>gi|260459414|ref|ZP_05807669.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259034968|gb|EEW36224.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 261

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 75/228 (32%), Gaps = 24/228 (10%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L+ G       F  + ++G   GFD+D  +AL   +     K  ++  +      A
Sbjct: 24  QEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQM---KVKCTFVAQDWDGIIPA 80

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
           LQ+ + D +  +   T  R+    + F    Y       + K   +   +   L+G +I 
Sbjct: 81  LQAGKFDAIVASMSITPERKE--KVDFSHKYYNTPSALAVPKDSTLKGVTKEDLAGKTIG 138

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V   TT     +  +           +    E  A     R DA   DI  L        
Sbjct: 139 VATTTTHFNYASKTY----TDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQWL---- 190

Query: 210 RPSEHVILPDIISKSPL---------APAIIQGDTEWYNIVSWTHYAM 248
              +      +   SP            A+ +G+T+  N ++    A+
Sbjct: 191 DSPDGACCKILGQPSPQPVDIFGPGAGIAVRKGETDLVNKLNEAIDAI 238


>gi|317506458|ref|ZP_07964259.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255219|gb|EFV14488.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
          Length = 508

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 17/252 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S +    +L D K  G L  G+     G  E + +G  +G D+D    +++ +      I
Sbjct: 18  SGAGTRDVLADAKA-GRLIIGVKFDQPGLGERRPDGSMRGLDIDVATYIAAELGVPEDHI 76

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +    +  R   L++ ++D +  +   +  R     + F    +  GQ  ++       
Sbjct: 77  TWREAPSPNRENLLRNGEVDFIVASYSISGAR--LNVVDFAGPYFHAGQSLLVRADDASI 134

Query: 139 SVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +      SG  +C   G+T    +    + +        ++       A    + DA T 
Sbjct: 135 TNVASLNSGKRLCSVTGSTPAQNI----RKNYPGVQLQQYDSYSACVEALHRGKIDALTT 190

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVT 250
           D   L      +  P E  ++    S       + +G T     ++          A   
Sbjct: 191 DDIILAGYAAQS--PGEFKLVGQPFSDELYGVGLARGQTPAKAQINAALQKMFDSAAWDA 248

Query: 251 AEELGITQKNIN 262
           A         I+
Sbjct: 249 AVLSAFGSSGID 260


>gi|157371444|ref|YP_001479433.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157323208|gb|ABV42305.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 263

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 87/257 (33%), Gaps = 23/257 (8%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   V +L L   F       +           +K GI+          A G   GF
Sbjct: 1   MKTKSSLVLLLPLAFSFAALGGEFSG--------KVIKLGIDPTFPPLEYKTAQGTLTGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  +AL + +    ++  ++  +       LQ+K+ D ++ +   T  RE    ++F 
Sbjct: 53  GVDIAQALCNEM---QARCVWVESSWDGMIPGLQAKKFDAIASSMTITPQREK--QISFS 107

Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                     +  K   +  + + L G SI VQ G++ E      ++      + I ++ 
Sbjct: 108 NKVSNAPARLVARKGSDLQPTAASLKGKSIGVQQGSSQEAYANAMWRQAG--VNVIAYQS 165

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            +E++      R DA +   S   +         +       +S S          + + 
Sbjct: 166 QQEVNEDLANGRLDA-SLLASVSASEFFKTPGGKDFAFTGAELSDSKYFGIGDGIGVRKE 224

Query: 234 DTEWYNIVSWTHYAMVT 250
           D    +  +    A++ 
Sbjct: 225 DRALLDAFNAALKAIIA 241


>gi|326692922|ref|ZP_08229927.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 288

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 19/252 (7%)

Query: 4   DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
               +++ L +++ T+ +     +   L  +++ G +  G+      F  +    G  +G
Sbjct: 15  IVLAAVIVLGLMWATATAKKNSEHEDTLARVERLGRIVWGVKADTKLFGLMNTKTGTPEG 74

Query: 59  FDVDFCRALS---SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           FDVD  +AL+   +     P   Q++P++A  +   L++  ID        T+  E    
Sbjct: 75  FDVDIAKALTVQIAKQTGVPMSAQFIPVSASSKMQLLKNTNIDGSVS--TMTITPEREKI 132

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    +  GQ  ++ K  GI SV  ++    +I V  GTT    +  +          
Sbjct: 133 IDFTKPYFDAGQSILVKKDSGIHSVKDMNDSKYTIIVVVGTTAATEIKKFAPKAK----V 188

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +       A ++ +  A + D + LY     N    E+ I     +  P   A    
Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---EYHIAGGTFTHGPYGIAFDND 245

Query: 234 DTEWYNIVSWTH 245
                   +   
Sbjct: 246 QGPMIREANKAL 257


>gi|291534359|emb|CBL07471.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Roseburia intestinalis
           M50/1]
          Length = 284

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 80/276 (28%), Gaps = 37/276 (13%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNASIL------------------------GDIKKRGF 35
           M K     +L  ++     +  +N++                           D  ++  
Sbjct: 1   MKKKVISILLTAVLATGMAACGSNSNTAGNSANNTADNAQNTAETSTESTGSADSAEKPV 60

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G+      +     NG   GF+VD   A+   +  D   +Q++         AL + 
Sbjct: 61  LTVGMEGTYAPYTYHDENGTLTGFEVDMANAIGEKMGYD---VQFVETEWDSITAALDAG 117

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
             D++      T  R+      F     +     I+      I+S   ++G        +
Sbjct: 118 NFDVVMNQVTITDERKE--RFDFSTPYIYSKPVLIVAADNTDINSFEDINGKKAAEGLTS 175

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                 +D  +++      +  ++         +   D    D       K         
Sbjct: 176 ----NFSDIARSYG--AEIVGQDKFALAMECVLSGEADCAINDELTYAYWKQQKGGEDST 229

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            I+ +  + +  A  + +G+ E    ++     ++ 
Sbjct: 230 KIVAESDNVNSSAIMVKKGNDELIEKLNSAIDELLA 265


>gi|291616873|ref|YP_003519615.1| ArtJ [Pantoea ananatis LMG 20103]
 gi|291151903|gb|ADD76487.1| ArtJ [Pantoea ananatis LMG 20103]
 gi|327393299|dbj|BAK10721.1| arginine-binding periplasmic protein 2 precursor ArtJ [Pantoea
           ananatis AJ13355]
          Length = 243

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 87/250 (34%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +   L+ L  ++ +              ++   +     F  + ++    GFD
Sbjct: 1   MKKWMIAA--ALVSLAVSAQAAE-----------KIRFATSATYPPFESLNSDNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  + F  
Sbjct: 48  IDLAKALCEQM---KAECSFTNTAFDSLIPSLKFRRYDAVIAGMDITAER--SKQVDFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    +++  L G  I V+ GTT +  L D         + + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFTAIDALKGKRIGVENGTTHQKYLQDKHPE----INVVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + +     TN+        +       + L  A+ +G+    
Sbjct: 158 NAILDMKSGRLDGVFGDSAVVNQWLKTNNDLASVGEHVTDPAYFGTGLGIAVRKGNAPLR 217

Query: 239 NIVSWTHYAM 248
           +  +    A+
Sbjct: 218 DKFNQALAAL 227


>gi|269960137|ref|ZP_06174513.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835108|gb|EEZ89191.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 254

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 91/248 (36%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L   +    S    A  L DI+K G L+ G       F+       + G+D
Sbjct: 1   MKK---TTLLLASVAMALSGVAQADKLEDIQKSGTLRVGTTGDYKPFSYYDGK-TYSGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   ++ +  + KE    L   + DI        + R+++       
Sbjct: 57  IDVAKHVAKQLGVE---LEIVRTSWKELLTDLNQDKYDIAMGGITRKMQRQLNAEQTQGY 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +T+         K +  +++ +++ AS+ V            +  A+  K     FE   
Sbjct: 114 MTFGKCFLVAKGKAEQYNTIDKVNQASVRVGVNIGGTN--EAFADANLQKASFTRFENNL 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + D    +       ++T++R  E     D  +K      I +G+    N 
Sbjct: 172 DVPKAVATGKVDVMVTETPEGLFYQVTDER-LEAARCEDPFTKGQFGYLIPKGEQRLLNT 230

Query: 241 VSWTHYAM 248
           V++    M
Sbjct: 231 VNFIIDEM 238


>gi|242239706|ref|YP_002987887.1| cationic amino acid ABC transporter periplasmic protein [Dickeya
           dadantii Ech703]
 gi|242131763|gb|ACS86065.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech703]
          Length = 244

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 77/253 (30%), Gaps = 31/253 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    L  T+                ++   +     F  + A     GFD
Sbjct: 1   MKKIVLAALLAGFTLSATAAE-------------TVRFAASATYPPFESLDAGNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   I    +   +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  IDLANALCKQI---QATCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     S++ L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAQKG-KYHSLANLKGKRIGMENGTTHQKYLQDTHPE----VKTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 +  R D   GD + +           E   + + ++           A+   + 
Sbjct: 158 NALIDLKNGRLDGVFGDTAVVNEW---LKTNPELATVGEKVTDEAYFGIGLGIAVRPDNQ 214

Query: 236 EWYNIVSWTHYAM 248
                ++    A+
Sbjct: 215 ALLEKLNNALAAI 227


>gi|239907730|ref|YP_002954471.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
 gi|239797596|dbj|BAH76585.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
          Length = 246

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 70/252 (27%), Gaps = 24/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++  + +       T +  L        +    +        V A+    G  
Sbjct: 1   MVKKLVLTLALVAM-------TASPTLAK-----TIVFATDATWPPMEFVNADKKITGLA 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A        P    +  +     F  L + + D +  +   T  R+    + F  
Sbjct: 49  VDLMEAAGKEAGFTPE---FKAVAWDGIFAGLAAGKYDAICSSVTITDERK--NTMDFST 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 Q  ++ KK     +  L G ++  Q  TT    +       +  Y  +      
Sbjct: 104 PYMKVRQALVIPKKSAAKCIEDLKGKTLGAQISTTGHFAVKKTEGVKDKSYDEVGL---- 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDTEWY 238
                    R D    D        L  D   + + +             A+ +G+ E  
Sbjct: 160 -AFEDLYNGRIDGVVCDDPVAKLYALKKDNYKDALKIACIIPADDELYGVAVQKGNKETL 218

Query: 239 NIVSWTHYAMVT 250
            +++    A+  
Sbjct: 219 ELINKGLAAVTA 230


>gi|89898980|ref|YP_521451.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89343717|gb|ABD67920.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 265

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 14/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M      ++  +      S +         L  I  +  +  G+ +    +  +  +   
Sbjct: 1   MKFKLLSTLAGVFASAVLSLATPAHAADDSLSSILAKKSIALGVASDFPPYGYMGPDFKL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DV   + ++  +      +    ++   R   LQ+K+ID++         RE    +
Sbjct: 61  TGVDVATAQLIADKLGVKAELVP---VSTPNRIPYLQTKKIDLIVSALGKNPEREKV--I 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F        Q     K   I S   L+G SI V  GT  +  L               F
Sbjct: 116 DFTVAYAPFFQAVFGPKALSIKSFDDLAGKSIAVTRGTIQDDVLQKVAP---PTLKIQRF 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E      AA+ + +        +   A       P        ++  SP    + +G+T 
Sbjct: 173 EDDATTVAAFISQQTQLLATGAAVAAAAVQ--KNPQVQAEYKLLLKDSPNFIGVRKGETA 230

Query: 237 WYNIVSWTHYAM 248
               V+    A 
Sbjct: 231 LMTKVNEILLAA 242


>gi|225868709|ref|YP_002744657.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701985|emb|CAW99548.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 258

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 76/243 (31%), Gaps = 14/243 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCR 65
           ++ ++ L     +   S+   I++ G L   ++     F     V       G D++  +
Sbjct: 1   MVSVLALAACGQTNKTSLQDRIRENGKLVVAVSPDYAPFEFKALVDGKDTIVGADIELAQ 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +      ++   +N      +LQ+ + DI      +T  R       F    Y  
Sbjct: 61  AIADELGVK---LELSAMNFDNVLSSLQTGKADIAISGLSYTKERAKV--YDFSEAYYET 115

Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
               ++        ++   L+G  + VQ G+  E  + +     N     +    + E  
Sbjct: 116 ENAILVKASDAKRYANKDSLAGKKVAVQKGSIEEGLVKEQLDKANC----VSLTVMGEAI 171

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              ++ +  A   +          +   +              A A+ +G  +    ++ 
Sbjct: 172 NELKSGQVQAVDLEAPVAAGFLAQHKDLALAPFKLQTGDGDAKAVAMPKGSDDLRQTINK 231

Query: 244 THY 246
              
Sbjct: 232 VIK 234


>gi|206558854|ref|YP_002229614.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198034891|emb|CAR50763.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 260

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 72/256 (28%), Gaps = 18/256 (7%)

Query: 1   MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   F  S+L + +L     + +  A  L  IK  G  + G       F      G   G
Sbjct: 1   MK--FLRSLLVVALLQATAATSALAADDLSQIKSAGVFRVGTEGTYAPFTYHDETGKLTG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD   A++  +   P   Q++          L   + D +      T  R+      F
Sbjct: 59  FDVDIATAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVVNEVSITDARKA--KYDF 113

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I+      I S   L G        T+    LA    A       +  +
Sbjct: 114 STPYITSHAVLIVRADNTTIRSFDDLKGKKSA-NTLTSNFGKLAAAHGA-----DVVPVQ 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236
              E      + R DA   D  +    +         +   D   +       + +G   
Sbjct: 168 GFNESIDLLTSGRVDATINDSLSYLDFRKHKPDAKLKIAATDQTGAGDASGVLLRKGSPA 227

Query: 237 WYNIVSWTHYAMVTAE 252
               +     A + A+
Sbjct: 228 LVAAIDKAL-ADIKAD 242


>gi|329297628|ref|ZP_08254964.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Plautia stali symbiont]
          Length = 263

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 89/241 (36%), Gaps = 21/241 (8%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L L +L   +F   A     I +   ++  I+     F      G   GFD+D   AL +
Sbjct: 14  LALAVLTGCAFGAQA----KIDQ---VRFAIDPTYPPFESKTPQGKLVGFDIDLGNALCA 66

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    +K  ++         AL++++ D +  +   T  R     + F    Y      
Sbjct: 67  QM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTVPLYDTHTQL 121

Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           I  K  G + +   L G ++ V+ GT  E      ++ H    + + +    ++++   +
Sbjct: 122 IARKGSGLLPTAESLKGKTVGVEQGTVQERYALAKWQPHG--VNVVPYGDQAQVESDLIS 179

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243
            R D    D +      L + +  +   L   I + P+     A  + +GDTE    +  
Sbjct: 180 GRLDVVFTDAAQAANGFLKHPQGKDF-ELAGPIVQDPIIGPGTAIGLRKGDTELKTALDN 238

Query: 244 T 244
           T
Sbjct: 239 T 239


>gi|314936089|ref|ZP_07843436.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis subsp. hominis C80]
 gi|313654708|gb|EFS18453.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis subsp. hominis C80]
          Length = 484

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 1   MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
           M+K   ++IL  +        + +   +    IK+ G L+ G++     F     VK   
Sbjct: 4   MFKTIIIAILISLTFINKEPMAHADQDAKWEKIKESGELRVGLSADYAPFEFEKTVKGKS 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ G D+D  + ++     +  K++ + +       AL++ +ID++      T  R+   
Sbjct: 64  EYVGIDIDLAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDVIISGMTSTPERKK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            + F       G   ++ K       ++   S   +  Q GT  E       +       
Sbjct: 119 EVDFSDSYTKTGNVMLIRKSDKNKFHTLKDFSNKKVAAQKGTEQEKIAQQEIE----NAD 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                R+ +   A ++++ +    +     A     +       +     K     A+ +
Sbjct: 175 ISSLNRLPDAILAVKSNKVEGLVIEKPVAEAYV-KQNNSLMIANVNFNEEKKDNVIAVPK 233

Query: 233 GDTEWYNIVSWTHY 246
                   V+ +  
Sbjct: 234 NSPILLANVNKSIK 247


>gi|228475903|ref|ZP_04060613.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis SK119]
 gi|228270058|gb|EEK11528.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis SK119]
          Length = 484

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 1   MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
           M+K   ++IL  +        + +   +    IK+ G L+ G++     F     VK   
Sbjct: 4   MFKTIIIAILISLTFINIEPMAHADQDAKWEKIKESGELRVGLSADYAPFEFEKTVKGKS 63

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ G D+D  + ++     +  K++ + +       AL++ +ID++      T  R+   
Sbjct: 64  EYVGIDIDLAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDVIISGMTSTPERKK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            + F       G   ++ K       ++   S   +  Q GT  E       +       
Sbjct: 119 EVDFSDSYTKTGNVMLIRKSDKNKFHTLKDFSNKKVAAQKGTEQEKIAQQEIE----NAD 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                R+ +   A ++++ +    +     A     +       +     K     A+ +
Sbjct: 175 ISSLNRLPDAILAVKSNKVEGLVIEKPVAEAYV-KQNNSLMIANVNFNEEKKDNVIAVPK 233

Query: 233 GDTEWYNIVSWTHY 246
                   V+ +  
Sbjct: 234 NSPILLANVNKSIK 247


>gi|210618018|ref|ZP_03291853.1| hypothetical protein CLONEX_04086 [Clostridium nexile DSM 1787]
 gi|210149011|gb|EEA80020.1| hypothetical protein CLONEX_04086 [Clostridium nexile DSM 1787]
          Length = 259

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 93/267 (34%), Gaps = 19/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    +   +   +     + K    +  G   G   +  +K N +  G D
Sbjct: 1   MKKKLLSALLVATCVVSMAACGSNKTEKEAKD-DKIIVGTEAGFAPYEYMKGN-EVVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++  +  +   ++   ++      A+ S ++D ++         +    + F  
Sbjct: 59  MDIAKAIADDMGKE---LEIKNMDFDGALAAVASGKVDFVAAGVSI--DEDRLKTMDFSH 113

Query: 121 ITYFDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                 +  +++ +    +        S L G  + VQ G   ++ ++   +        
Sbjct: 114 EYVNSTEVIVVNGESPAVTPAGAELSGSDLDGKVVAVQQGNIADIWVS--NEEKCKPKEV 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             + +  +     + ++ D    D     A +L     +   IL  ++ +   A A+ +G
Sbjct: 172 KRYTKFAQAAEDLKNNKVDCIVMD--QYPAEQLVASNGT-LKILDGVLFEDKYAIAVKKG 228

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKN 260
           + E  + ++     ++   ++     N
Sbjct: 229 NQELLDKINKVIDQLIEDGKIEEFTAN 255


>gi|311695922|gb|ADP98795.1| extracellular solute-binding protein, family 3 [marine bacterium
           HP15]
          Length = 250

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 80/247 (32%), Gaps = 22/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F +   L ++   + +              L+   +     F     NG+  GF+
Sbjct: 1   MKKMIFAASCALALIAGGAQAQERD----------LRIAFDVPYEPFEYKDENGELTGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+   +    +  +++          L +++ D++  +   T  R     + F  
Sbjct: 51  VELAEAMCEEM---NANCEFVIQAWDGMIPGLLARKFDLIMSSMSITPERAE--RVLFSE 105

Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G+   +     ++ +S + G ++ VQ GTT +  + +             +  
Sbjct: 106 PYYNTPGGWFGPESFNTDVTDMSAMEGKTVGVQRGTTMDTYVTENM---GGIVTIKRYTT 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +++       R D    D       +    +     +   +     +  A+ Q DT+  
Sbjct: 163 ADDMVLDLEGQRLDVVFVDYP--VGEQTVLTKEGFKEVGEAVKLGEGVGVAMRQRDTDLA 220

Query: 239 NIVSWTH 245
             V+   
Sbjct: 221 EEVNAAL 227


>gi|253574192|ref|ZP_04851534.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251846669|gb|EES74675.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 281

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 13/229 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
               ++L  +K  G L+ G       F     +G   GFDV+    ++  +  +     +
Sbjct: 45  PAEQNLLEAVKASGKLRIGTEGTYAPFTFHDKDGKLTGFDVEIAEEVAKRLGVEAE---F 101

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139
           +       F  L +K+ D +          +      F           I+ +    I +
Sbjct: 102 IETPWDGIFAGLDAKRFDAVFNEVTI--RDDRKEKYDFSDPYIVSRAVLIVPEDNEDIKT 159

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G         +    L D  + +      +  E   +      + R DA   D  
Sbjct: 160 FADLKGKKAG----QSLTSNLTDIARENG--AEIVATEGFNQAIDLLLSKRIDATVNDGL 213

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +   LK       +  ++ ++   S  A    +G+ E    V+    AM
Sbjct: 214 SFLDLKKQRPD-VKLKVVDEMPEASESAALFNKGNEELVQAVNEALAAM 261


>gi|238854602|ref|ZP_04644935.1| L-cystine-binding protein TcyA [Lactobacillus jensenii 269-3]
 gi|260664278|ref|ZP_05865131.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           jensenii SJ-7A-US]
 gi|282933429|ref|ZP_06338808.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1]
 gi|238832787|gb|EEQ25091.1| L-cystine-binding protein TcyA [Lactobacillus jensenii 269-3]
 gi|260562164|gb|EEX28133.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           jensenii SJ-7A-US]
 gi|281302443|gb|EFA94666.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1]
          Length = 263

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 84/252 (33%), Gaps = 15/252 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    + L  I +   + S   S   ++  +G L  G+      +A    NG   GF+V
Sbjct: 5   KKISLFAGLIAISVGLVACSNQKSSSSEVLHKGTLTVGLEGTYAPYAYR-ENGKLTGFEV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A++         I+++P         L +K+ DI+  +   T  R+     AF   
Sbjct: 64  DLAKAVAKKAGYK---IKFVPTKWDSLIAGLGAKKFDIVINDIAMTPERKK--AYAFSTP 118

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     IM K    I S   + G  I    GT     +  +   +      +      
Sbjct: 119 YIYSKSALIMKKTNNTIKSAKDIKGLKIAAATGTANADNVKKFGGQN------VSSTDFS 172

Query: 181 EIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWY 238
                 R +R  A      A  Y  K  +    +++ +P    +   +   + +G++   
Sbjct: 173 TAMELIRQNRVVAAMNSKEAFLYYQKSQHVTDLKYMEVPSSQIAAQEIGIMMAKGNSSLQ 232

Query: 239 NIVSWTHYAMVT 250
             ++     +  
Sbjct: 233 KKINKALNTLKE 244


>gi|227115306|ref|ZP_03828962.1| glutamine ABC transporter periplasmic protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 248

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 81/247 (32%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  + ++   S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSLLKASLAAMTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K    P++      ALQ++ ID+       T  R+    + F  
Sbjct: 51  IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I     L+G  + V++GT +     DY KA+        F  +
Sbjct: 106 GYYNSGLLVMVKADNNDIKGEQDLAGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +        +R DA   D   +     T     +   + D I       A  +G  E   
Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGSNELRE 220

Query: 240 IVSWTHY 246
            V+    
Sbjct: 221 KVNGALK 227


>gi|296158681|ref|ZP_06841511.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295891249|gb|EFG71037.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 267

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 9/246 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++  F+ +L  ++   T+    A  L  I K G ++ G+N      +   A     GFD
Sbjct: 1   MFRAVFL-VLAAVVATMTAQVAEARTLDQIIKSGTIRIGVNPNFPPMSSYNATNQLAGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++S +        ++P  A +R   L S +IDI       T   E +  + F  
Sbjct: 60  IDVGNKIASTLNIKAE---FVPTEAAQRVPFLVSDRIDISLGAL--TRSAERAQLIDFTV 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             + +    +   K   +  + L+  SI +           DY K    K   ++ E + 
Sbjct: 115 PLHTESMSVLTTSKIKATKWTDLNSPSITLVDMRGNWSV--DYVKDKLPKAKMLLVESIA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A    R DA   +I              +   L D I  +  +  + +G++   + 
Sbjct: 173 DTVRAVAQGRGDAIVENIDFFQNFTKNYPN-IKWRTLNDPIFVNYDSIGVSKGNSTLKDY 231

Query: 241 VSWTHY 246
           ++   +
Sbjct: 232 LNVVLF 237


>gi|261217243|ref|ZP_05931524.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261320114|ref|ZP_05959311.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
 gi|260922332|gb|EEX88900.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261292804|gb|EEX96300.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
          Length = 251

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 11/239 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +  +     + S  A +    K+   ++         F  +  +G   GFD+D   AL  
Sbjct: 1   MAGLASVVLTVSVQAPV--QAKEWKEIRIASEGAYPPFNYMSPDGKLVGFDLDIANALCE 58

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+    +K   +  +       L+S + D +  +   T  R+  +   F    Y      
Sbjct: 59  AM---EAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTDKYYSTPLSV 113

Query: 130 IMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            + K   I+S       G ++  Q  TT      D +          ++   +E +A  +
Sbjct: 114 AVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPTADEANADLK 171

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           + R DA   D   +      +      +I     +++  A A+  GD +     +    
Sbjct: 172 SGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLREQFNAAIK 230


>gi|241554156|ref|YP_002979369.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863462|gb|ACS61124.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 278

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 13/238 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78
               A  L +I     L+C     +  FA       +  GFDVD C A++  +       
Sbjct: 19  LPAKADQLDNIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCGAIAKELGVKAE-- 76

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
              P++ + R   ++  ++DI   N  +TL R   +   F    Y   +  I+       
Sbjct: 77  -IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADDAGK 133

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             +  +G  I    G+T+E+++         K  P+ F+       A +  +      + 
Sbjct: 134 KKADYAGQRIASTKGSTSEMSI------KLNKSDPLTFQDTASAYLAVQQGKARGMVANT 187

Query: 199 SALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                    +  +     ++ + +   P+   + +        ++     + T+ E+ 
Sbjct: 188 MTTTKFVNESKSKGKAMRMIEEPMLYQPIGIGMAKDQPALTAKINEILRKLDTSGEIN 245


>gi|163868116|ref|YP_001609320.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           tribocorum CIP 105476]
 gi|161017767|emb|CAK01325.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           tribocorum CIP 105476]
          Length = 250

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 82/248 (33%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F   L +    FT  +              LK         F+ + +N   +GFD
Sbjct: 1   MK--LFARALIISAALFTQLA----------DAKTLKIASEGTYPPFSYIDSNNKLQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  + +     L +K+ D +  +   T  R     + F  
Sbjct: 49  IDISYALCKKMNVE---CTIVTQDFEGMIPGLIAKKYDAIVASLSHTQER--LQKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+ K  GI   S     G ++ VQ+ TT      D++ +  +K    ++  
Sbjct: 104 PYYDTALAVIVTKDSGIKEISTQSFRGRNLGVQSNTTQATYAEDHYASKGIK--IKLYPS 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E++     HR D    D            R    ++     +K P+A A+ Q + +  
Sbjct: 162 TIEVNRDLLNHRLDLIIVDKLQALNWLKNEGRDCCLLLGTLEETKFPVAIALRQNNNDLK 221

Query: 239 NIVSWTHY 246
              +    
Sbjct: 222 TKFNEAIK 229


>gi|294085010|ref|YP_003551770.1| polar amino acid uptake family ABC transporter periplasmic
           substrate-binding protein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664585|gb|ADE39686.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 301

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 89/237 (37%), Gaps = 16/237 (6%)

Query: 1   MYKDFFVSILCLIILFF-TSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K   + +    + F   + S +           I  RG +  G+      +    ++G
Sbjct: 22  MLKKIALGMAAASVAFVPLAVSADGHKCTNDTWNKIMSRGKIVVGVKADYKPWGYRNSDG 81

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G ++D  + +++ +  +   ++ +P+ +  R   L+  + D+L         R   +
Sbjct: 82  SLVGMEIDMAKDVAAKMGVE---LEMVPVQSSNRMQFLEQGKTDLLIATMSDRQDRREIV 138

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G+   P  Y  G   +  K  G++S   L G  +C + G      + + + A       I
Sbjct: 139 GIV-GPNYYTSGTNVMAPKALGLTSWEDLRGKPVCGKQGAFYNQIVEERYGA-----QVI 192

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            F    E   A R  +C A+  D S++    L++ +  +  +       +P A A+ 
Sbjct: 193 AFTGNAEAKQALRDKKCIAWVYDDSSI-GSDLSSGQYDDFEMPLQSEDDNPWALAVP 248


>gi|239816390|ref|YP_002945300.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239802967|gb|ACS20034.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 268

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 75/240 (31%), Gaps = 10/240 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +   +A  + DIKK+G +  G+      +    A     G+D D  R L+       
Sbjct: 24  TVFAPFASAQSVADIKKKGEITIGMLVDFPPYGTTNAQNQPDGYDADVARLLAKD---WG 80

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K   +P+    R   L + ++D+L  +   T  R   +   F               K 
Sbjct: 81  VKANIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQ--FSQPYAAATIVLYGATKA 138

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I +   L G  + V   +T ++ +               F+       A  + + DA  
Sbjct: 139 PIKAAGDLKGLRVGVARASTQDVAVTKAAPE---GTEIRRFDDDASAMQALISGQVDAI- 194

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              S   A ++    P+        + +  +  A+  G  E    V+          EL 
Sbjct: 195 -GCSVTVAAQIAKRVPAGTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVAKNTANGELN 253


>gi|257869173|ref|ZP_05648826.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           gallinarum EG2]
 gi|257803337|gb|EEV32159.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           gallinarum EG2]
          Length = 275

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 24/256 (9%)

Query: 6   FVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAE---VKA 52
           F+++  L+ L       ++S           L  IK  G L    +     F     +  
Sbjct: 4   FITVAALLTLAACGNGGSSSTDSSKKGDQNQLEAIKSAGVLNVATSADFAPFEFHALIDG 63

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G D+D    ++  +      +  + L       AL   + DI       T  R  
Sbjct: 64  KDQIVGADIDLVNEIAKELGVK---VNVMDLEFNAVLTALSQGKADIAVSGISATDER-- 118

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                F    +   Q  ++ K     +S++   SG  +  Q G+  E  + +        
Sbjct: 119 KQTFDFTDNYFTPEQKIVIKKDNTDALSAIDDFSGKKVGAQKGSIQEAVVQNQLA----D 174

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +   +V  +    +    D    + +   +    ND  +   I  +       A A+
Sbjct: 175 SQLVSIAKVPNLINELKQGSIDGLVLESAVADSYVAQNDDLAVADIALEASPDDSYAIAL 234

Query: 231 IQGDTEWYNIVSWTHY 246
            +G TE  + ++    
Sbjct: 235 PKGSTELKDELNRILK 250


>gi|209809240|ref|YP_002264778.1| bacterial extracellular solute-binding protein [Aliivibrio
           salmonicida LFI1238]
 gi|208010802|emb|CAQ81199.1| bacterial extracellular solute-binding protein [Aliivibrio
           salmonicida LFI1238]
          Length = 266

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 16/239 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K   +S + L +LF +S  + +    +  IK+RG LK G++T  V +A     G+  GF+
Sbjct: 2   KRILLSFVSLCLLFSSSAFSESMTPNVDKIKERGTLKVGLST-FVPWAMRDTQGNLIGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + L+     D   I ++P        +L S + D++      T  R     + F  
Sbjct: 61  VDVAKRLAKDSGLD---IVFIPTAWDGIIPSLISGKFDVIIGGLTITDERAK--SVLFTT 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                G     +KK       +   +    I V+ G  T   + + F         + F+
Sbjct: 116 PYSHSGVQVAANKKLTEGFTREQFNSRRVKIAVRRGAVTVAAVRESFPKAK----VLQFD 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              +           A            +       ++   + +S+   A A+  G+ +
Sbjct: 172 DDAQAFQEVLNGNAHAVAASTPKPEFDAIKYSD-VLYLPFKERLSEGNEAFAVRLGEDD 229


>gi|241661636|ref|YP_002979996.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240863663|gb|ACS61324.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 275

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 77/231 (33%), Gaps = 10/231 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                  +A  L +I+K G ++  I      F  +  +   +G+D+D    ++  +    
Sbjct: 31  LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMANLVAKELGVKA 90

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +    + +  R   L + ++D++  +      R     + F        +     K  
Sbjct: 91  ELVP---VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDV 145

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I + + L+G +I V  G+T +L L+    A         +E       +Y   +    T
Sbjct: 146 SIKAPADLAGKTIGVTRGSTEDLALSAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 202

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                  A+          + L   +  +P    + +G+    + V+    
Sbjct: 203 VGNIVANAVNERTK--LRQLDLKFPVEDTPCYVGVAKGEPALLDKVNAVIT 251


>gi|153837562|ref|ZP_01990229.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           AQ3810]
 gi|149749059|gb|EDM59870.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus
           AQ3810]
          Length = 247

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 86/257 (33%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    SI+ LI     + +              +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLTSIIGLISANVAANAVAQD---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCKEM---DAKCSFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 107 AYYDNSAAFVSIK-DKVADQNALEGKRVGVQNGSTHQSYLIEQMP----GVTSVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGERVTNPKYFGNGFGIAVNKGNDELV 221

Query: 239 NIVSWTHYAMVTAEELG 255
           N ++    A+    E  
Sbjct: 222 NKLNTALEAVKANGEYD 238


>gi|332180504|gb|AEE16192.1| ABC-type transporter, periplasmic subunit family 3 [Treponema
           brennaborense DSM 12168]
          Length = 278

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 83/285 (29%), Gaps = 22/285 (7%)

Query: 1   MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
           M K         +++            S L  IK +G +  G +     +          
Sbjct: 1   MLKKTLTVFAAFLLVLPVIALGQKDAGSKLDQIKAKGKIILGTSADYPPYEFHLLKDGKD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFDV     ++  +      ++   +N      AL S  +D +      T  R+   
Sbjct: 61  TIVGFDVAIAEEIAKDLG---VTLEIKDMNFDGLLAALVSGNVDFVISGMTPTEERK--Q 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKA----- 166
            + F  I Y    G ++         S    L  A +  Q G        +  K      
Sbjct: 116 NVDFSDIYYQAVHGAVIRAADTGKYGSDPASLKNAMLGAQKGAIQVGIAKEQIKGVTGAA 175

Query: 167 -HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             +          + ++    +  + +A   ++    A    N          +      
Sbjct: 176 LDDNHPQIKELGTLPDLIMEVKNGKVEAVVAELPVAKAYVKANPDLILADYTFEDSEGGS 235

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
            A A+ +G+ +  + ++ T  A +TAE+          +  D+  
Sbjct: 236 -AIAVKKGNQDLVSAINKTI-ARLTAEDKITEFVGTASLLADSQQ 278


>gi|330951074|gb|EGH51334.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7]
          Length = 273

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTHAMAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVRQV 249


>gi|157369895|ref|YP_001477884.1| cationic amino acid ABC transporter periplasmic binding protein
           [Serratia proteamaculans 568]
 gi|157321659|gb|ABV40756.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Serratia proteamaculans 568]
          Length = 244

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++   L  + F + +              ++   +     F  + AN    GFD
Sbjct: 1   MKK-LLLAATVLAGIAFNASAAE-----------TIRFAASATYPPFESLDANNKIVGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ K+ D +    D T  R   +   F  
Sbjct: 49  IDLANALCKQM---KAECTFTNQAFDSLIAALKFKKYDAVISGMDITPERSKQVA--FTQ 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS++ L G  + ++ GTT +  + D         + + ++  +
Sbjct: 104 PYYANSAIVIAEKG-KFSSLADLKGKKVGMENGTTHQKYMQDKHPE----INTVSYDSYQ 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +      N +  P    +       + L  A+   +    
Sbjct: 159 NAILELKNGRIDGVFGDTAVVNEWLKNNPQLAPVGEHVTDAQYFGTGLGIAVRPDNQALL 218

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 219 AKLNSALDAI 228


>gi|302187473|ref|ZP_07264146.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae 642]
          Length = 254

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 82/255 (32%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           Y+   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YRKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R  S  + F   
Sbjct: 52  EIGQALCAKMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITKER--SEVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D            +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSVEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ + DT
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKDDT 222

Query: 236 EWYNIVSWTHYAMVT 250
           +  + ++     ++ 
Sbjct: 223 QLRDRLNAALKEIIA 237


>gi|167572118|ref|ZP_02364992.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia oklahomensis C6786]
          Length = 256

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 19/245 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++ L + +L  ++    A     I      + G++     F     +G   GFDVD    
Sbjct: 1   MAALTVALLAVSAGGAYAKDWSTI------RFGVDASYPPFESKGPDGKVVGFDVDLGNE 54

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +    +K  ++  +      AL++++ D +  +   T  RE  +   F    +   
Sbjct: 55  ICKRV---KAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTP 109

Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              +  K   +   +  L G ++ V+ GT  E     Y+    +K  P  ++  +++ A 
Sbjct: 110 TRLVTKKGANLMPTADSLKGKTVGVEQGTIQETYAKTYWAPKGVKVQP--YQNQDQVYAD 167

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNI 240
             A R DA   D        L   R  +       +             + + DT+    
Sbjct: 168 LLAGRLDAALQDAVQADIGFLKTPRGKDFAFAGSDLDDPKTLGEGAGIGLRKEDTDLKAK 227

Query: 241 VSWTH 245
           +    
Sbjct: 228 IDKAI 232


>gi|125718174|ref|YP_001035307.1| arginine/histidine ABC transporter permease [Streptococcus
           sanguinis SK36]
 gi|125498091|gb|ABN44757.1| Arginine/histidine ABC transporter, permease component, putative
           [Streptococcus sanguinis SK36]
          Length = 722

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 61/210 (29%), Gaps = 16/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L   F    +  A           +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   I            A+Q+ Q D +      T  RE         
Sbjct: 52  VDIINKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL G  + V+ GT  +  L      +        F+  +
Sbjct: 107 TYYDTKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D   +         
Sbjct: 165 LMYNSLSAGDVDAVMDDQPVIEYAINQGQN 194



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +       ++    F     +  + G D++  +A++         ++           ++
Sbjct: 270 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 326

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q+ Q D +      T  R+ +    +    Y       +     I S  +L G ++ V+ 
Sbjct: 327 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 384

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT ++  L +    +        F     +  +       A   D   +        +  
Sbjct: 385 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 440

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               L   I  +P    A          ++   +  +   +E G  Q+ +++        
Sbjct: 441 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 496

Query: 272 D 272
            
Sbjct: 497 S 497


>gi|66048136|ref|YP_237977.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63258843|gb|AAY39939.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 254

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R+    + F   
Sbjct: 52  EIGQALCAKMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D            +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSVEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNAALKEIIA 237


>gi|296276990|ref|ZP_06859497.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus MR1]
          Length = 485

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|292487227|ref|YP_003530099.1| putative ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|292900398|ref|YP_003539767.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291200246|emb|CBJ47374.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291552646|emb|CBA19691.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
          Length = 257

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  ++    +S +   + L  ++  G LK G       F+    +G   GFD
Sbjct: 1   MKSIATLLLAGMVQFGLSSQALAETELAKVQSAGTLKIGTEGTYPPFSYHDTSGKLIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +        ++          L +++ D +      T  R       F  
Sbjct: 61  VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      + S   L G        T+    LA ++ A       +  +  
Sbjct: 116 PYLSSRAVLIVRNDNSEMKSFDDLKGKKSA-HTLTSNFAQLAGHYGA-----QIVGTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K       +  I   + +       + +G+ E   
Sbjct: 170 NQSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKGNPELKA 228

Query: 240 IVSWTH 245
            +    
Sbjct: 229 AIDKAI 234


>gi|212704552|ref|ZP_03312680.1| hypothetical protein DESPIG_02612 [Desulfovibrio piger ATCC 29098]
 gi|212671951|gb|EEB32434.1| hypothetical protein DESPIG_02612 [Desulfovibrio piger ATCC 29098]
          Length = 247

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 82/245 (33%), Gaps = 21/245 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K F  ++L  ++    +F+                 GI++    FA V    G   GF
Sbjct: 1   MKKLFVCALLFGLLASVPAFAQ-----------KTYVNGIDSNYPPFAYVDEKTGQPAGF 49

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++  +     K+ + P+      LAL +KQID+++     T  R     + F 
Sbjct: 50  DVDAMNWIAKTMG---FKVVHKPVAWDGIVLALANKQIDMIASGMSITEKRRKV--VDFS 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   + F++     ++    LS    + VQ GT+    +    K     +    +E 
Sbjct: 105 DPYWEVSRVFLVPADSKLTPADILSKPIKLGVQRGTSEAEAIKQEQKEKGYPFELRFYES 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      R +A   D S      +   +                  AI +GD E  
Sbjct: 165 CPLAVEDLVNGRIEAALMD-SLPAGDAIARGKAV--KKAGVHGEPDQFGVAIRKGDKELR 221

Query: 239 NIVSW 243
            ++  
Sbjct: 222 ALIDE 226


>gi|238920412|ref|YP_002933927.1| arginine-binding periplasmic protein 2 [Edwardsiella ictaluri
           93-146]
 gi|238869981|gb|ACR69692.1| arginine-binding periplasmic protein 2 [Edwardsiella ictaluri
           93-146]
          Length = 244

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 31/253 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++   ++   F++ +              ++   +     F  + A+ +  GFD
Sbjct: 1   MKK--LLACAIVVACSFSAQAAEN-----------IRFASSATYPPFESLDASNNIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R+  +   F  
Sbjct: 48  IDLAKALCQEM---KANCTFNNQAFDSLITALKFKRYDAVISGMDITPERQRQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     S++ + G  + ++ GTT +  L D          P+ ++  +
Sbjct: 103 PYYANSAIIIAQKG-KYHSIADMKGLRVGMENGTTHQKYLQDKHPE----IKPVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 +  R D   GD + +           +   + + ++           A+   + 
Sbjct: 158 NAILDLKNGRIDGVFGDTAVVNEW---LKNNPQLAAVGEYVTDPQYFGIGLGIAVRPDNQ 214

Query: 236 EWYNIVSWTHYAM 248
              + ++    A+
Sbjct: 215 ALLHQLNQALAAI 227


>gi|258405469|ref|YP_003198211.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257797696|gb|ACV68633.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 244

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 78/251 (31%), Gaps = 25/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L + +    + +              +   ++        V +  +  G+ 
Sbjct: 1   MLKKLLFTVLAICLGAQMAVA------------KEIVFAVDATWPPMEFVNSEKEIVGYS 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF  A +      P    +  +     F  L     D +  +   T  R+    + F  
Sbjct: 49  IDFMTAAAEEAGFTP---VFKNVAWDGIFAGLAGGNYDAICSSVSITEERKE--AMDFSE 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K     ++  L G  +  Q GTT   T+ D     +    P  ++ + 
Sbjct: 104 PYFQVQQALVVPKDVEAKTLEDLEGEPVGAQIGTTGYFTIKD-----DGAPEPKSYDEIG 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEW 237
                    R      D           +  S+ + +    +  ++     A+ +G+ + 
Sbjct: 159 LAMQDLLNGRLAGVVCDDPVAANYAKQEEGFSDALKIAAILESDTEEYYGIALKKGNEDL 218

Query: 238 YNIVSWTHYAM 248
             +++    A+
Sbjct: 219 LKLINKGIRAV 229


>gi|238753464|ref|ZP_04614827.1| Arginine-binding periplasmic protein 2 [Yersinia ruckeri ATCC
           29473]
 gi|238708417|gb|EEQ00772.1| Arginine-binding periplasmic protein 2 [Yersinia ruckeri ATCC
           29473]
          Length = 243

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL  + L  ++                L+   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATILTGMALSASAAE-------------TLRFAASATYPPFESMGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I HK    +S++ L G  I ++ GTT +  + +           + ++  +
Sbjct: 103 PYYANSAIVIAHKG-KFTSLADLKGKRIGMENGTTHQKYMQEKHPE----IQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     T+         +       + L  A+   +TE  
Sbjct: 158 NAILDLKNGRIDGVFGDTAVVNEWLKTHPELASVGEHVTDAQYFGTGLGIAVRPENTELL 217

Query: 239 NIVSWTHYAM 248
           N ++    A+
Sbjct: 218 NKLNKALDAV 227


>gi|221308175|ref|ZP_03590022.1| hypothetical protein Bsubs1_02048 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312497|ref|ZP_03594302.1| hypothetical protein BsubsN3_02034 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317433|ref|ZP_03598727.1| hypothetical protein BsubsJ_02048 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321695|ref|ZP_03602989.1| hypothetical protein BsubsS_02059 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767112|ref|NP_388243.2| cystine ABC transporter substrate-binding lipoprotein [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|239938837|sp|P42199|TCYA_BACSU RecName: Full=L-cystine-binding protein tcyA; Flags: Precursor
 gi|225184739|emb|CAB12155.2| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 268

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      + + I    +              +  +   IKK+G L  G       F  
Sbjct: 1   MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              +     G+DV+    ++  +     K+ +        F  L SK+ D+++     T 
Sbjct: 61  HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWDSMFAGLNSKRFDVVANQVGKT- 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +      F           +  K    I S + + G +   Q+ T+    LA    A 
Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    E + +     +  R D    D  A+     T+   +  +       +S   
Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGEPQSTY- 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               +G  E  + V+     M  
Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250


>gi|74312827|ref|YP_311246.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           sonnei Ss046]
 gi|73856304|gb|AAZ89011.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           sonnei Ss046]
 gi|323168517|gb|EFZ54197.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           sonnei 53G]
          Length = 260

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 95/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L              +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKAFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|332111085|gb|EGJ11117.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 285

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 8/215 (3%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G +     F      G+  GFD+D  +A+++    +   ++++    +  F +L     
Sbjct: 52  VGTDAAYAPFESQDEKGEIVGFDIDVLKAIAAKAGFE---VKFINTPWEGIFNSLGQGDR 108

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           DI+      T  R+    L F    +   Q   +     ++  + L    + VQ GTT +
Sbjct: 109 DIVISAVTITDERK--QTLDFSDAYFDAAQLIAVRDNSKVTKFADLKKLKVGVQTGTTGD 166

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +           +   FE          +   DA   D   +      N       I 
Sbjct: 167 EAVTKL--QGKTSTNIKRFESTPLALKELESGGVDAVVADNGVVIHHVANNPGAKFKTIS 224

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               +      A+ +G+T     ++    A + A+
Sbjct: 225 DTEFAPEQYGIAVKKGNTAVLEKINQGL-AGIKAD 258


>gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
          Length = 722

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 78/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F +  S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++        ++   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +       + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSSLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNDQKLQLVGDKETGSSYGFAVKKGQN 223



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A GD+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|310829836|ref|YP_003962193.1| extracellular solute-binding protein family 3 [Eubacterium limosum
           KIST612]
 gi|308741570|gb|ADO39230.1| extracellular solute-binding protein family 3 [Eubacterium limosum
           KIST612]
          Length = 271

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 83/219 (37%), Gaps = 14/219 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G++             +  GFDVD     +  +  +P   +   +N   + L L S
Sbjct: 43  TFVVGLDDSFPPMGFRDDQNNIVGFDVDLATEAAKRMGMEP---KMQVVNWDTKELELDS 99

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             ID +      T  RE ++ +        + Q  ++ K  GI+  + L G ++ +Q G+
Sbjct: 100 GNIDAIWNGLSVTPEREEAMLM--TKPYLKNDQVIVVKKDSGITKKADLEGKNVGLQKGS 157

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEE---IDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +      D F+A ++           E           R DA   D S +    ++++  
Sbjct: 158 SAY----DAFEADDIHTKVAGMNEYPENVSALQDLGIGRIDAVIVD-SVVARYYISSENA 212

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            ++VIL + +S    A A+ +G+TE    +      MV 
Sbjct: 213 -DYVILDESLSPETYAVAVKKGNTELQGKIQKAIDDMVA 250


>gi|291570910|dbj|BAI93182.1| extracellular solute-binding protein [Arthrospira platensis
           NIES-39]
          Length = 282

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 23/268 (8%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   +S+L L++ + FT  +   ++L  I + G L+ G+ T  V F+ +  NGD +G+
Sbjct: 1   MNQKLAISLLSLVLSVGFTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            VD  R +   +    + P +++   +  ++RF  +Q   +D++   T  T  RE   G+
Sbjct: 61  SVDLIRLIHGRLQEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE--NGV 118

Query: 117 AFRPITYFDGQGFIMHKKKGIS-----------SVSQLSGASICVQAGTTTELTLADYFK 165
            F    +  G   ++  +               S   L   +I     TTT+  L   + 
Sbjct: 119 DFSTPFFVTGIQMLVKTENRDRLDPTQLSETDISTVSLERVTIGFLESTTTDSELRPVYP 178

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISK 223
               +          E     +         D   L      + R  ++  L     ++ 
Sbjct: 179 EAQWE----AVPSRAEGIRRLQEGELQGIVSDGILLLGQLWKDGRTRQNFQLVPSQPLTF 234

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                 +     EW  +V+ T  +    
Sbjct: 235 ENYGCILPMNSREWSRVVNSTIASPENT 262


>gi|255100911|ref|ZP_05329888.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-63q42]
          Length = 267

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 85/253 (33%), Gaps = 12/253 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            K    +I+  ++      S   +        + +  +  G +   V    +   GD  G
Sbjct: 6   KKVGIFTIMLGLLGGVVGCSKPNNEKDKDASKESKKEVVVGFDNTFVPMGFLDEKGDTVG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREISLGLA 117
           FDVD  +     +     ++++ P++   +   L   + +D+L      T  R+    ++
Sbjct: 66  FDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKKI--VS 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIV 175
           +      + Q  +      I+S + L    +  Q G+T    +     F        P++
Sbjct: 121 YTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKGGAPVL 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  ++        R  A  GD   +    +      ++ +L D         A  + + 
Sbjct: 181 YDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVATSKENP 239

Query: 236 EWYNIVSWTHYAM 248
           E    ++ T   M
Sbjct: 240 ELCEKINETLKEM 252


>gi|167837282|ref|ZP_02464165.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           thailandensis MSMB43]
          Length = 264

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     +  ++         ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCTKL---KVRCVWVENAFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R     + F    Y      I  K  G + +V+ L G  I V  
Sbjct: 87  ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTVASLKGKRIGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +      ++ R DA   D  A     L+  + +
Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                 D +S + +        + + D +  + V+    
Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGLRKHDAQLKSAVNQALK 241


>gi|257095770|ref|YP_003169411.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048294|gb|ACV37482.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 304

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 77/240 (32%), Gaps = 8/240 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSK 77
             +  L  I+    +  G   G   FA +       GF +D CR    A+ + +      
Sbjct: 29  AGSPTLDKIRAAETVYLGYREGSAPFAYLDPEQKAIGFSLDLCRHVTDAIQARLGLPALS 88

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +  +P     R + L+++ ID+       T  R+ S+  +            ++ +   +
Sbjct: 89  VVQVPTTPGSRQIMLEAETIDLDCGPVTNTEQRQRSVAYSVTIFVAGVKA--LVRQDSSV 146

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            ++  L    +   AGTT E  +        +  +        E          D    D
Sbjct: 147 RALKDLKDKVVVTTAGTTAEAYIKSAAVRQGLLINYRFGRDHAESLRLLLRGNADVLVLD 206

Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L  L            ++L D     P   A  + D E+  +V  T   ++ + E  
Sbjct: 207 DALLAGLLSNLPPAERGRLIVLADSYGFEPYGLAFRRQDPEFKRLVDDTLVGVMQSGEFA 266


>gi|322647257|gb|EFY43756.1| cystine transporter subunit [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
          Length = 193

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 67/202 (33%), Gaps = 18/202 (8%)

Query: 1   MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M            V  + L+         +  +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VDF  AL+  +          P        +L +K+ID++      + +R+  
Sbjct: 61  GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F       G   ++ K     I + + L G  + V  GT  E  L  +        
Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171

Query: 172 HPIVFERVEEIDAAYRAHRCDA 193
               ++         R  R DA
Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDA 193


>gi|148268330|ref|YP_001247273.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150394392|ref|YP_001317067.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|253315189|ref|ZP_04838402.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|255006646|ref|ZP_05145247.2| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257793783|ref|ZP_05642762.1| polar amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|258413720|ref|ZP_05681993.1| polar amino acid ABC transporter [Staphylococcus aureus A9763]
 gi|258420773|ref|ZP_05683712.1| polar amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|258438434|ref|ZP_05689718.1| polar amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|258443879|ref|ZP_05692218.1| polar amino acid ABC transporter [Staphylococcus aureus A8115]
 gi|258447334|ref|ZP_05695481.1| polar amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|258448183|ref|ZP_05696310.1| polar amino acid ABC transporter [Staphylococcus aureus A6224]
 gi|258453384|ref|ZP_05701367.1| polar amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|269203495|ref|YP_003282764.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282895157|ref|ZP_06303376.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A8117]
 gi|282928597|ref|ZP_06336196.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A10102]
 gi|295406165|ref|ZP_06815973.1| polar amino acid ABC transporter [Staphylococcus aureus A8819]
 gi|297244912|ref|ZP_06928789.1| polar amino acid ABC transporter [Staphylococcus aureus A8796]
 gi|147741399|gb|ABQ49697.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946844|gb|ABR52780.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|257787755|gb|EEV26095.1| polar amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|257839507|gb|EEV63978.1| polar amino acid ABC transporter [Staphylococcus aureus A9763]
 gi|257843377|gb|EEV67787.1| polar amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|257848478|gb|EEV72469.1| polar amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|257851285|gb|EEV75228.1| polar amino acid ABC transporter [Staphylococcus aureus A8115]
 gi|257853921|gb|EEV76877.1| polar amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|257858422|gb|EEV81298.1| polar amino acid ABC transporter [Staphylococcus aureus A6224]
 gi|257864476|gb|EEV87221.1| polar amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|262075785|gb|ACY11758.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589806|gb|EFB94891.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A10102]
 gi|282762501|gb|EFC02642.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A8117]
 gi|283471129|emb|CAQ50340.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus ST398]
 gi|294969162|gb|EFG45183.1| polar amino acid ABC transporter [Staphylococcus aureus A8819]
 gi|297177992|gb|EFH37240.1| polar amino acid ABC transporter [Staphylococcus aureus A8796]
 gi|315130497|gb|EFT86483.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|329732960|gb|EGG69304.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 485

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
          Length = 722

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F +  S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++        ++   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223



 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 75/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A  D+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQSDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|163868117|ref|YP_001609321.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           tribocorum CIP 105476]
 gi|161017768|emb|CAK01326.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           tribocorum CIP 105476]
          Length = 250

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       I+   +   ++ S              LK   +     F+ + +N + +GFD
Sbjct: 1   MKLLARALIISATLFTLSANSQ------------TLKIASDASYPPFSYIDSNNELQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  + +     L +K+ D +  +   T  R     + F  
Sbjct: 49  IDISYALCKKMNVE---CTIVTQDFEGMIPGLLAKKYDAIISSLSPTKER--LQKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+ K   I   S     G ++ VQ+ TT      D++       +  ++  
Sbjct: 104 PYYNTALAVIVTKNSEIREISPQAFRGKNLGVQSNTTQAAYAEDHYAPEG--VNIKLYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E++    +HR D    D            +    ++     +K P+A A+ + + +  
Sbjct: 162 TIEVNRDLLSHRLDIIIFDKLKALNWLENEGKDCCKLLGTLEETKFPVAIALRKNNHDLK 221

Query: 239 NIVSWTHY 246
           N  +    
Sbjct: 222 NSFNKAIK 229


>gi|257077632|ref|ZP_05571993.1| amino acid ABC transporter [Enterococcus faecalis JH1]
 gi|256985662|gb|EEU72964.1| amino acid ABC transporter [Enterococcus faecalis JH1]
          Length = 569

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F +  S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++     +   +   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A GD+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|255261459|ref|ZP_05340801.1| arginine-binding periplasmic protein 1 [Thalassiobium sp. R2A62]
 gi|255103794|gb|EET46468.1| arginine-binding periplasmic protein 1 [Thalassiobium sp. R2A62]
          Length = 245

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 79/245 (32%), Gaps = 22/245 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L ++ +  T+ + +            L+         F  V ++G+  GFD
Sbjct: 1   MKKTLIGASLAVVAMTTTAQAQD-----------VLRIATEGAYPPFNNVTSDGELVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+     + + +  +       L + + D +  +   T  R     + F  
Sbjct: 50  VDIAKALCVAM---DRECEIVAQDWDGIIPGLVNNKYDAIIASMSITEER--LEAINFTA 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    +  +   + +   L   +I  Q  T       D F     +    +++   
Sbjct: 105 PYYSNYLSVLGKEGSDL-TREGLGDVAIGAQRSTVGWQWTEDQF---GSRADVRLYDTNP 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +   A R +A   D     A  L       ++    I     +   I +GD E  N 
Sbjct: 161 AAVSDLEAGRIEAIVMD-FLPAAEVLNTTSGLGYID-EKIDINDQIGIGIRKGDDELTNA 218

Query: 241 VSWTH 245
            +   
Sbjct: 219 FNAAL 223


>gi|222152850|ref|YP_002562027.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
 gi|222113663|emb|CAR41586.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
          Length = 270

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 84/254 (33%), Gaps = 18/254 (7%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           M K    F ++    ++  T+ S N  AS+   IK +G L   ++     F         
Sbjct: 1   MKKFKLIFTALSLSSLMLLTACSQNSSASLQTKIKDKGKLVVALSPDYAPFEFKTLKDGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D+   + +++ +      ++  P++      +LQ+ + D+      +T  R   
Sbjct: 61  DTIVGSDIMLAQEIANKL---DVALELSPMSFDNVLSSLQTGKADLAISGISYTKERAKV 117

Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      ++  +    + S+  L+G  I VQ GT  E       KA     
Sbjct: 118 --YDFSKPYYSTKNAMLIKGESKNDLKSLEDLAGKKIGVQKGTIEESLSKKQLKA----S 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           H +    + E     ++ + DA   +          N+                 A A+ 
Sbjct: 172 HIVSLTTMSEAINELKSGQIDAVDLEGPVAEGYLAQNEDLVLAPFKLKTGEGDAKAIAMP 231

Query: 232 QGDTEWYNIVSWTH 245
           +G  +    V+   
Sbjct: 232 KGSKDLKKTVNQVI 245


>gi|172064620|ref|YP_001812270.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171998105|gb|ACB69021.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 265

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 19/230 (8%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G       F+ ++ +G   GFD+D   AL + +  +      + +       
Sbjct: 24  KEWKDIRIGYEGAYPPFSSMQPDGTPVGFDIDIIHALCAQMHAN---CTLVQIGWDGLLP 80

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASI 148
           AL + ++D +  +   T  R+    +AF    Y   +  ++ K   +   + ++L G  +
Sbjct: 81  ALMADKVDAIVASVAITAERK--QKVAFTDKYYNTPRRLVVAKSSPVKDATPAELKGKRV 138

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GT  +   + Y+  +      + +    E+    RA R DA   D +A Y+  LT 
Sbjct: 139 GVQRGTLADKYASAYWVPNG--VLVVRYPTQGEVYLDLRAGRIDAALQDATAAYSAFLTK 196

Query: 209 DRPSEHVILPDIIS----------KSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +    +   I                  + + D      ++     +
Sbjct: 197 PEGANFKFVGTPIVGTTPEQKALLGEGYGIPVRKTDDGLRQQLNQAITGI 246


>gi|54288345|gb|AAV31633.1| putative amino acid-binding protein [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 261

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 11/242 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L ++       NA  L  I   G +K  +      F  V A+G+ +G+D
Sbjct: 1   MKK-ILSFLTALTLMIGPISFANAGDLSKILADGVVKIAVPESFAPFGSVGASGEHEGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +      +  +   +K+R   L++ ++D++         R     + F  
Sbjct: 60  VDVAKLIAEDLGVKLELVPVV---SKQRIPFLETDRVDLVVSVMGANPKRAK--SINFSS 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G     K  +SS   LSG ++ V  GT  +L L     +         F    
Sbjct: 115 AYAPFYSGAFASSKIDVSSPGDLSGLTVGVTGGTLEDLELTKVAPS---DAKITRFGDNA 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +AY + +        +A  +L  T+  P+  +    II  SP    + +G+ +    
Sbjct: 172 ATLSAYTSGQVQVLVTGNTAAASL--TDADPNLDLERKYIIKDSPCFIGVKKGNEDLLRW 229

Query: 241 VS 242
           V+
Sbjct: 230 VN 231


>gi|300717492|ref|YP_003742295.1| lysine/arginine/ornithine ABC transporter, periplasmic ligand
           binding protein [Erwinia billingiae Eb661]
 gi|299063328|emb|CAX60448.1| lysine/arginine/ornithine ABC transporter, periplasmic ligand
           binding protein [Erwinia billingiae Eb661]
          Length = 265

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 87/252 (34%), Gaps = 21/252 (8%)

Query: 1   MYKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    S+L    I       +  A     I     ++  ++     F      G   G
Sbjct: 1   MAKALMSSVLRKAAIASLMAGCAFGAQ--AKI---DRVRFAVDPTYPPFESKTPQGKLVG 55

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   AL + +    +K  ++         AL++++ D +  +   T  R     + F
Sbjct: 56  FDIDLGNALCTQM---QAKCVWVESQFDGMIPALKARKFDAILSDMGVTEER--LKQIDF 110

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y      I  K  G + +   L G ++ V+ GT  E      ++      + + + 
Sbjct: 111 TEPMYDTKTQLIARKGSGLLPTPESLKGKTVGVEQGTVQERYALAKWQPAG--VNVVPYG 168

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQ 232
              ++++   + R DA   D +      L + +  +   L   I + P+     A  + +
Sbjct: 169 DQAQVESDLVSGRLDAVFTDAAQAAIGFLKHPQGKDF-ELAGPIVQDPIIGPGTAIGLRK 227

Query: 233 GDTEWYNIVSWT 244
           GD E    +   
Sbjct: 228 GDAELKTALDNA 239


>gi|321314030|ref|YP_004206317.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus
           subtilis BSn5]
 gi|320020304|gb|ADV95290.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus
           subtilis BSn5]
          Length = 268

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      + + I    +              +  +   IKK+G L  G       F  
Sbjct: 1   MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              +     G+DV+    ++  +     K+ +        F  L SK+ D+++     T 
Sbjct: 61  HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWDSMFAGLNSKRFDVVANQVGKT- 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +      F           +  K    I S + + G +   Q+ T+    LA    A 
Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    E + +     +  R D    D  A+     T+   +  +       +S   
Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGDPQSTY- 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               +G  E  + V+     M  
Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250


>gi|300920063|ref|ZP_07136520.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           115-1]
 gi|300412882|gb|EFJ96192.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS
           115-1]
          Length = 215

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 78/232 (33%), Gaps = 20/232 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                  +R DA   D   +     T     +   + D +       A  + 
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKA 214


>gi|21283528|ref|NP_646616.1| hypothetical protein MW1799 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486677|ref|YP_043898.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57650648|ref|YP_186741.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87161641|ref|YP_494491.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88195682|ref|YP_500488.1| ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221962|ref|YP_001332784.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161510076|ref|YP_001575735.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221142158|ref|ZP_03566651.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253732516|ref|ZP_04866681.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|258452651|ref|ZP_05700650.1| amino acid ABC transporter [Staphylococcus aureus A5948]
 gi|282924191|ref|ZP_06331866.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9765]
 gi|284024905|ref|ZP_06379303.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|294850288|ref|ZP_06791023.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9754]
 gi|297207424|ref|ZP_06923861.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911508|ref|ZP_07128953.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304380538|ref|ZP_07363213.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|21204969|dbj|BAB95664.1| MW1799 [Staphylococcus aureus subsp. aureus MW2]
 gi|49245120|emb|CAG43586.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57284834|gb|AAW36928.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87127615|gb|ABD22129.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87203240|gb|ABD31050.1| ABC transporter, permease protein, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374762|dbj|BAF68022.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160368885|gb|ABX29856.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723797|gb|EES92526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257859626|gb|EEV82475.1| amino acid ABC transporter [Staphylococcus aureus A5948]
 gi|269941329|emb|CBI49726.1| putative extracellular glutamine-bindingprotein [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282592986|gb|EFB97988.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9765]
 gi|294822904|gb|EFG39338.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9754]
 gi|296887887|gb|EFH26783.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300887140|gb|EFK82340.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302751667|gb|ADL65844.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340867|gb|EFM06792.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315196792|gb|EFU27136.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141291|gb|EFW33136.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|329314534|gb|AEB88947.1| Polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329729517|gb|EGG65919.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 485

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|291283550|ref|YP_003500368.1| Histidine-binding periplasmic protein precursor [Escherichia coli
           O55:H7 str. CB9615]
 gi|209764884|gb|ACI80754.1| histidine transport system histidine-binding periplasmic protein
           [Escherichia coli]
 gi|290763423|gb|ADD57384.1| Histidine-binding periplasmic protein precursor [Escherichia coli
           O55:H7 str. CB9615]
 gi|320663076|gb|EFX30393.1| histidine ABC transporter substrate-binding protein HisJ
           [Escherichia coli O55:H7 str. USDA 5905]
          Length = 260

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 22/261 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +FS+  +    I +   ++ G +     F    + G+  GFD+D  + L   I    ++ 
Sbjct: 13  AFSSATATFAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQC 67

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++         +L++K+ID +  +   T  R     +AF    Y      ++ K   I 
Sbjct: 68  TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125

Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L G  + V  GTT E    +++    +    + ++  + I +   A R DA   D
Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252
             A     L      ++      +    L        + + D E    ++   +A + A+
Sbjct: 184 EVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242

Query: 253 ELGITQKNINQVSKDTTNPDV 273
                     +++K   + DV
Sbjct: 243 ------GTYEKLAKKYFDFDV 257


>gi|188590550|ref|YP_001922410.1| amino acid ABC transporter [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188500831|gb|ACD53967.1| amino acid ABC transporter [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 278

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 29/263 (11%)

Query: 2   YKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFAE 49
            K   +  +  + +     + N            AS+L  IK++G L  G +     +  
Sbjct: 7   KKLGLIVAIGAMAISIVGCAGNKNEAGSKDGKETASVLESIKQKGKLVVGTSADYPPYEF 66

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              V       GFD+   ++L+  +  +   +Q   ++     ++LQ+ ++D++      
Sbjct: 67  HKEVGGKDQIVGFDISIAKSLAEDLGVE---LQINDMDFDGLLISLQAGKVDMVFAGMTP 123

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R       F  I Y    GFI+ K  +  I S+  L    I VQ G+  E    +  
Sbjct: 124 TDER--KQNAEFSDIYYTAQHGFIVRKGEEGNIKSIDDLKDKKIGVQKGSIQEKLANEKI 181

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK 223
                        +V ++    + ++ DA   ++         N      +V+L D    
Sbjct: 182 P----DAEKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVVLEDSEGG 237

Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246
           S  A A+ +G  +    ++ T  
Sbjct: 238 S--AIAMSKGSDDLKGEINKTIQ 258


>gi|172041410|ref|YP_001801124.1| putative extracellular solute-binding protein [Corynebacterium
           urealyticum DSM 7109]
 gi|171852714|emb|CAQ05690.1| putative extracellular solute-binding protein [Corynebacterium
           urealyticum DSM 7109]
          Length = 382

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 9/200 (4%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSA 70
           L  L  T+ S   ++  +I KRG L  G+   L         + D  GF+VD  R ++  
Sbjct: 76  LGSLAPTAASVQENVP-NISKRGRLIVGVAQSLYRLGYRDSESSDLIGFEVDLAREIARD 134

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           IF DP K+++  + ++ R  AL++  +D++ R    T  R+    L F        +  +
Sbjct: 135 IFGDPDKVEFRYVESRHREEALRTGDVDLVLR--TMTTTRKRQKALEFSIPYLHVQERLL 192

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             K  GI SV+ L   ++C          +AD           +      +   A +  +
Sbjct: 193 TQKGSGIESVADLKHKTVCASQDF-PPGMVADLL----HPKRILQTRTWTDCLMAMQQGQ 247

Query: 191 CDAYTGDISALYALKLTNDR 210
            DA   D + L  L   +  
Sbjct: 248 VDAIYSDDAVLSGLAAQDPD 267


>gi|78358110|ref|YP_389559.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220515|gb|ABB39864.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 273

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 15/223 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +     RG LK G +T  V +A     G++ GF+VD  R L++ +     ++Q++P  
Sbjct: 33  STIARAVDRGVLKVGFST-FVPWAMKDKQGEFIGFEVDVARRLAADLG---LEVQFVPTK 88

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQ 142
                 AL + + D++          + ++ + F     + G   + H  K  G S +  
Sbjct: 89  WSGIIPALLTGKFDVIIGGMSV--KPDRNISVNFTIPYDYAGMAVMAHKGKAAGFSRLED 146

Query: 143 LSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                + V A   TT       YF A        +F+   +        R  A       
Sbjct: 147 FDREDVVVVARIGTTAASVAKKYFPAA----QVRLFDDEAQAVQELLNGRAHAMVSSAPL 202

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                L +   +  + +    ++ P+  A+ +GD +  N+ + 
Sbjct: 203 PAFTVLEHPD-TLFMPVEGTFTREPVGFAVRKGDIDTLNVFNN 244


>gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein
           [Enterococcus faecalis HH22]
 gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system
           [Enterococcus faecalis E1Sol]
 gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Fly1]
 gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein
           [Enterococcus faecalis HH22]
 gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system
           [Enterococcus faecalis E1Sol]
 gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Fly1]
 gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 722

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F +  S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++        ++   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A GD+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|71737344|ref|YP_273294.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71557897|gb|AAZ37108.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 273

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKMGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|15614024|ref|NP_242327.1| ABC transporter (substrate-binding protein) [Bacillus halodurans
           C-125]
 gi|10174078|dbj|BAB05180.1| ABC transporter (substrate-binding protein) [Bacillus halodurans
           C-125]
          Length = 276

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 24/246 (9%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDI-------------KKRGFLKCGINTG 43
           M K            L +    +  T      +              +K+  L  G +  
Sbjct: 1   MKKIKNWMQLGVTSILAVGLLVACGTAEDTPEEATTGADDVEAEAGDEKKSVLVMGTSAD 60

Query: 44  LVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              +  V    G+  GFDVD    ++S +  +   ++   ++      ALQ+ ++D    
Sbjct: 61  YPPYESVDVTTGEIVGFDVDIAEYITSELGYE---LKIQDMDFNGIIPALQAGRVDFALS 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R+    + F  + Y      +  ++ G+SSV  L+G ++ VQ  +  E    +
Sbjct: 118 GMTPTEERKK--SVDFSDVYYDAQNLVVFKEEDGLSSVEDLAGKTVGVQLASIQEEAAVE 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             +  +         RV E+     A R DA   + +        N       I  +  +
Sbjct: 176 LQEELD-GLTIETRNRVPELVQELLAGRVDALIIEDTVAAGHLEANPGLVRFAIESEGET 234

Query: 223 KSPLAP 228
            S +A 
Sbjct: 235 GSAIAF 240


>gi|218768584|ref|YP_002343096.1| histidine-binding periplasmic protein [Neisseria meningitidis
           Z2491]
 gi|121052592|emb|CAM08932.1| histidine-binding periplasmic protein [Neisseria meningitidis
           Z2491]
 gi|319410821|emb|CBY91211.1| putative amino acid-binding lipoprotein (HBP) [Neisseria
           meningitidis WUE 2594]
          Length = 268

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252


>gi|305680314|ref|ZP_07403122.1| bacterial extracellular solute-binding protein, family 3
           [Corynebacterium matruchotii ATCC 14266]
 gi|305659845|gb|EFM49344.1| bacterial extracellular solute-binding protein, family 3
           [Corynebacterium matruchotii ATCC 14266]
          Length = 333

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +I  RG L  GI+      +      G+ +GF+VD  + +++ IF DP+KI++  +++  
Sbjct: 81  EIISRGRLIVGIDQSQNLLSFRNTITGELQGFEVDIAKEIAADIFGDPTKIEFRYVDSAN 140

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              +L+S QID+  R    T  R+    + F           ++HK   I  +S++ G  
Sbjct: 141 WIDSLESHQIDMAIRTLSIT--RDRQDQVFFSTPYLKGSTKILVHKSSAIKGISEIGGRP 198

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV + +T      +           +V     +     + ++  A   D   L  +   
Sbjct: 199 VCVTSQSTGIHYARNLAP----TSDLVVVRSSADCLIVMQQNQASAVITDDVILSGMSAQ 254

Query: 208 NDRPSEHVILPDIISKSPLAPA-----IIQGDTEWYNIVSWTH 245
           +       I    +S      A                ++ T 
Sbjct: 255 DP---FTTIEGGSLSNENYGIATAKPGYRHHTDGLIRQINATL 294


>gi|253688085|ref|YP_003017275.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754663|gb|ACT12739.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 243

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I    T+                ++   +     F  + AN +  GFD
Sbjct: 1   MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ ++ D +    D T  R  S  + F  
Sbjct: 48  MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPER--SKQVTFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S  + + G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P    +   +         L  A+   D  
Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KTNPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNNALDAI 227


>gi|118470254|ref|YP_890525.1| glutamine-binding periplasmic protein/glutamine transporter
           permease [Mycobacterium smegmatis str. MC2 155]
 gi|118171541|gb|ABK72437.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Mycobacterium smegmatis str. MC2 155]
          Length = 475

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 70/222 (31%), Gaps = 14/222 (6%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIF 72
           +L              IK  G L+ G       F+       +  G+D+D  +A++  I 
Sbjct: 1   MLLAGCGPAANDSDEPIKAAGVLRVGTEGVYAPFSYHDPATNELTGYDIDVVKAVADKIG 60

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +IQ++       F AL++ + DI++     T  R+                  +  
Sbjct: 61  ---VQIQFVETPWDSIFAALEANRFDIIANEVTITDERKA--KYDLSEPYSVGEGVIVTR 115

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                I+S+  L G  +  +  T+    +A    A          E   +        R 
Sbjct: 116 ADDNSITSLDDLKG-KVAAENATSNWSEIARQAGAR-----VEAVEGFTQAIKLLNQGRV 169

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           D    D  A+YA        +   I  ++  KS    A  + 
Sbjct: 170 DVVVNDSIAVYAYLAETGD-TSVKIAGEVGEKSEQGFAARKD 210


>gi|312830230|emb|CBX35072.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Staphylococcus aureus subsp. aureus ECT-R 2]
          Length = 485

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDNGLIDKYMTNAANAMNDDSGF 273


>gi|300693431|ref|YP_003749404.1| substrate-binding periplasmic (pbp) ABC transporter protein
           [Ralstonia solanacearum PSI07]
 gi|299075468|emb|CBJ34762.1| putative substrate-binding periplasmic (Pbp) abc transporter
           protein [Ralstonia solanacearum PSI07]
          Length = 254

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 76/218 (34%), Gaps = 13/218 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +IK+ G L          F     +    GF+++  +A+   +      I++  L+   
Sbjct: 26  EEIKQSGKLIVATGGEFPPFNYFAGS-QLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               LQ  + D++  +   T  R     + F    Y  G   +      I + + L+G  
Sbjct: 82  LLAGLQQNRWDLVISSHGVTEERAK--AVDFASPHYCSGSSIVAR-DPAIRTAADLTGKV 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ G+T    +    K          F +  +   A  + R DA+  D     AL   
Sbjct: 139 VAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDR--FVALAAI 192

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P  ++ L   +    +A A+ +G+T      +   
Sbjct: 193 QSNPETNLKLGSPLFVERIAAAVAKGNTALAASYNKAL 230


>gi|86360204|ref|YP_472093.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86284306|gb|ABC93366.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 257

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 93/276 (33%), Gaps = 26/276 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M      ++   +    ++ +  A           ++ G+ N     F    A+G+W+G+
Sbjct: 1   MK--LLPTLFAGVAFALSAVAAQA----------EVRFGVMNESYPPFFAKNASGEWQGW 48

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+   +     K   + ++      ALQSK+ D++  +   T  R     + F 
Sbjct: 49  EIDLMNAVCEEM---KEKCSIVEISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 103

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K +   ++   + G +I +Q  T        YF           ++ 
Sbjct: 104 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFAEA---ADEKTYQT 160

Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           ++E      + R D   GD  AL   LK    +     +      K  L   +  G  + 
Sbjct: 161 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEVLGAGVSGGLRKE 220

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
              +     A + A          + ++K   + D+
Sbjct: 221 DTELKAKLNAAIAA---VRANGQYDAITKKYFDFDI 253


>gi|313893844|ref|ZP_07827410.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441408|gb|EFR59834.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella sp. oral taxon 158 str. F0412]
          Length = 261

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 92/322 (28%), Gaps = 69/322 (21%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
           M  K     +    I      +   +    +  +   + G +     F      +G   G
Sbjct: 1   MKFKKIAALLGAFTIASSLFIAGCGNT---VTSQKTWRVGTDATYAPFGFKDKDSGKLAG 57

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A++     +        LN      ALQS  IDI   +       + +  + F
Sbjct: 58  FDIDIINAIAKEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTI--SEDRAKSVDF 112

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G G +++     I+S   L G  I V  G+T     +    A   +++ IV  
Sbjct: 113 SKPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIKNADVRQFNIIV-- 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +     +    D    D            +     +  +    +PL  A+ +G+ E 
Sbjct: 171 ---DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNGEV 226

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
            N ++                                               GL K    
Sbjct: 227 LNKIND----------------------------------------------GLAK---- 236

Query: 298 RIIRHMGNYGEMFDRNLGNQSE 319
             I+  G Y E++ +  G +  
Sbjct: 237 --IKANGKYAEIYKKWFGKEPP 256


>gi|312171328|emb|CBX79587.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 257

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  ++    +S +   + L  ++  G LK G       F+    +G   GFD
Sbjct: 1   MKSIATLLLAGMVQFGLSSQALAETELAKVQSAGTLKIGTEGTYPPFSYHDTSGKLIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +        ++          L +++ D +      T  R       F  
Sbjct: 61  VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      + S   L G        T+    LA ++ A       +  +  
Sbjct: 116 PYLSSRAVLIVRDDNSEMKSFDDLKGKKSA-HTLTSNFAQLAGHYGA-----QIVGTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D  +    K       +  I   + +       + +G+ E   
Sbjct: 170 NQSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKGNPELKA 228

Query: 240 IVSWTH 245
            +    
Sbjct: 229 AIDKAI 234


>gi|225386719|ref|ZP_03756483.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme
           DSM 15981]
 gi|225047197|gb|EEG57443.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme
           DSM 15981]
          Length = 306

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 105/304 (34%), Gaps = 56/304 (18%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASI--------------------------------- 26
           M K+    + +   ++   S +                                      
Sbjct: 1   MKKNLKMSAAILAAVMVMGSLTACGGSSSDPTTAAAAKDTTAAAADSGSSAAADSGSATG 60

Query: 27  -----LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD------- 73
                +  I   G LK G+ T +  F+ +  A G+++G + D    ++  IF        
Sbjct: 61  DVTADVQKIIDAGVLKVGVKTDVPCFSLLNTATGEYEGLEDDLAYNIAGKIFGCTPDEAK 120

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           +   +++  + AK R   +++ ++D++      T  R+ +    F    + D  G ++ K
Sbjct: 121 EKKLVEFQGVTAKTRGPLVENGELDMVIATFTITEERKET--YNFSTPYFTDAVGLLVLK 178

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI--VFERVEEIDAAYRAHRC 191
             GI+S+  L G  I V  G+T++     Y     +   P    F+    + AA  A   
Sbjct: 179 DSGINSIEDLDGKVIGVAQGSTSQKGFEAYVAEKGINVKPTFEEFDGYPALAAALSAKNI 238

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           D ++ D + L   +        + +L D  ++        + +T    +V      +  +
Sbjct: 239 DVFSVDRAILAGYR-----DDTNKLLDDRYAEQEYGVCTKKENTGLAELVDGVVTDLKDS 293

Query: 252 EELG 255
            +L 
Sbjct: 294 GKLA 297


>gi|113868715|ref|YP_727204.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 gi|113527491|emb|CAJ93836.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia
           eutropha H16]
          Length = 264

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 87/220 (39%), Gaps = 8/220 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  L  IK+R  +   ++     +  +       G D++  R L+  +  D   ++ +P
Sbjct: 23  SADTLDTIKQRKKILVAVDISAPPYGMLDTQARQSGSDIETARLLAKDLGVD---LEIVP 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +    R   L +++ D++  +   T  R+    + F               K  + S + 
Sbjct: 80  VTGPNRVPFLLTRKADVVLASFSVTDARKKV--IDFSEPYGVIPVVVGGPTKAQVKSFAD 137

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           LSG ++ V  GTT++  L+   KA     + + +E     + A    + D     IS + 
Sbjct: 138 LSGKTVAVTRGTTSDQELSRGAKAV-AAVNIVRYEDDATTNTAVSTGQQDYLAAAISVIP 196

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            ++     PS  + +  ++   P A  + +GDT   + + 
Sbjct: 197 EVR--RSNPSRDLEIKFVMQTFPYAIGLRKGDTALKDWLD 234


>gi|320657375|gb|EFX25177.1| ABC transporter lysine/arginine/ornithine binding periplasmic
           protein [Escherichia coli O55:H7 str. 3256-97 TW 07815]
          Length = 260

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSELAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|297563321|ref|YP_003682295.1| extracellular solute-binding protein family 3 [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296847769|gb|ADH69789.1| extracellular solute-binding protein family 3 [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 281

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 77/244 (31%), Gaps = 9/244 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
           ++   + S        +     L  G+ T          +G   GFDVD    ++  +  
Sbjct: 18  VIGLPACSAVLGEEESLLDADTLTVGVKTDQPNLGLEDGSGGITGFDVDVAFYIADRLGF 77

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
               ++   + + +R   L S ++D++      T  R+  +     P         +  +
Sbjct: 78  AAEDVEVTGVTSADREEKLISGEVDMVVATYSITPARKTQVTFG-GPYYVAKQDVLVRAE 136

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              +  V  L   S+C   G+ + + +++      +               A RA   DA
Sbjct: 137 DTDVRGVRDLEDRSVCQGEGSYSAVRISEGL---GIGIEQREAPSYSACIDALRAGEVDA 193

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---YAMVT 250
            + D   L       + P     + +  +       +  GD      V+      Y   T
Sbjct: 194 VSTDNLILAGFLA--EEPDAFRFVNNPFTDEKYGVGLPHGDVRACEAVNRAISQMYQDGT 251

Query: 251 AEEL 254
           AEEL
Sbjct: 252 AEEL 255


>gi|171186212|ref|YP_001795131.1| extracellular solute-binding protein [Thermoproteus neutrophilus
           V24Sta]
 gi|170935424|gb|ACB40685.1| extracellular solute-binding protein family 3 [Thermoproteus
           neutrophilus V24Sta]
          Length = 276

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 86/267 (32%), Gaps = 24/267 (8%)

Query: 1   MYKDFFVSILCLIILFFTS------------FSTNASILGDIKKRGFLKCGINTGLVGFA 48
           M     + I   + L   +             +   + +  IKKRG L  G +     + 
Sbjct: 8   MDYRLILGIAIGVALGVLAMALFAGQSQPQTAAACPTSVEAIKKRGKLVVGTSADWPPYE 67

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V   G   G D+D  R ++ ++     +++   +       A++   +D++  +   T 
Sbjct: 68  YV-EGGRIVGIDIDIARRIADSLG---VQLEIRDMKFSALIEAVKRGDVDMVIADMAVTP 123

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            RE    + F      D    I+ + + +S V  L G SI VQ GT  E          N
Sbjct: 124 ERER--QVLFSIPYQVDTSVVIVRRGEAVSGVEALRGKSIGVQVGTVQEDWAVKTLG--N 179

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                   +    +  A R    DA         AL        +   +    S    A 
Sbjct: 180 YSKIVRYDKVYPYMVEALRKGDVDAIVVGGVVGKALVKRFPDLEQAFTVGVRYS----AV 235

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
           A+     +    +    Y M+ + EL 
Sbjct: 236 AVPLCAYDLKIQIDRVIYDMLQSGELE 262


>gi|154247956|ref|YP_001418914.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154162041|gb|ABS69257.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 296

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 88/232 (37%), Gaps = 7/232 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80
             L  +      + G       ++   ANG   G+ VD CR ++      +     K+ Y
Sbjct: 38  QTLDRVAGGEAFRIGYRQFAPPYSYAAANGQPSGYIVDLCREVADGVKRTLKLPAIKVDY 97

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           + + A++RF A++  +IDIL   +  T+ R     + F   T+ DG G +      +  +
Sbjct: 98  VKVTAEDRFEAVRDGRIDILCEPSSMTMSRRAL--VDFSLPTFLDGAGVVTR-GAPVKGL 154

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G  + V  GTTTE TL        +    +      +        + DAY GD   
Sbjct: 155 EDLKGKKVGVLRGTTTEETLRSTLGQMRIAADIVTVTDHPDGLKQLADGKLDAYFGDRGI 214

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           L  L   +   +   +     +    A A+ +GD  +  +V  T   +   E
Sbjct: 215 LNYLIANSPAGNRLSLSDQYFTFETYALALPRGDQAFRLVVDATLADLYRTE 266


>gi|119387803|ref|YP_918837.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119378378|gb|ABL73141.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 265

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 70/244 (28%), Gaps = 13/244 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +  F ++   ++        +A+ L  IK  G L+ G+      F    A+G   G
Sbjct: 1   MKLNRRIFTALAAGVLAMGLVPPASAADLDAIKNAGTLRVGMLVDFPPFGIQDASGKADG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D D   AL   +      +    +    R   L S Q+D+L  +   T  R     + F
Sbjct: 61  YDADVANALGEFLGVQAQIVP---VTGPNRIPYLLSGQVDVLVASLGITEERAE--KVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                             ++    L+G S+ V   +T +  +               F+ 
Sbjct: 116 SKPYAGISIAVYGDGGLEVTDAEGLAGQSLAVARASTQDTGVTAVAPQ---GTDIRRFDD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 A  + +             +        +       +S      A+  G     
Sbjct: 173 DASAVQALMSGQVRLIGLSNVVFSQVSTVAGDRFDKKF---DLSSQVQGIAVAPGSDALL 229

Query: 239 NIVS 242
             V+
Sbjct: 230 EQVN 233


>gi|303247515|ref|ZP_07333787.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
 gi|302491211|gb|EFL51103.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
          Length = 246

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 78/250 (31%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F +++  + +    S +              +    +        V A+    G+ 
Sbjct: 1   MVKKFILALALVAMTASPSLA------------KTIVFATDATWPPMEFVNADKQISGYA 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +++ +A +          ++  +     F  L + + + +  +   T  R+    + F  
Sbjct: 49  IEYMKAAAKEAG---FTAEFKAVPWDGIFAGLAAGKYNAICSSVTITPERKK--SMDFST 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++  K     +  + G ++  Q  TT    +       +  Y  +      
Sbjct: 104 PYFKVRQALVVPAKSAAKCIDDMKGKTLGAQISTTGHFAIKKAEGVKDKSYDEVGL---- 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SPLAPAIIQGDTEWY 238
                    R D    D        L N++    + +  II         A+ +GD E  
Sbjct: 160 -AFEDLYNGRIDGVVCDDPVAAQYALQNEKYKHSLKIACIIEAGDEYYGIAVKKGDKEDL 218

Query: 239 NIVSWTHYAM 248
           ++++    A+
Sbjct: 219 DLINKGIEAV 228


>gi|86153292|ref|ZP_01071496.1| histidine-binding protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843018|gb|EAQ60229.1| histidine-binding protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 251

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++++ L+ LF  + S + +   +      LK G       F     N    GFD
Sbjct: 1   MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++     T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + + L G  I VQ GT     L +              + +
Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                A + ++ DA   D           + P       +       + A  +   + 
Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQKN 223


>gi|307312875|ref|ZP_07592504.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306899389|gb|EFN30022.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 269

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M          +  +  ++   NA           L+ G+      F    ++G  +G+D
Sbjct: 1   MKNWQTSLTGLITAVLLSAAPANADT---------LRVGMECTYAPFNYRTSDGKLEGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +S  I  D    +Y+         AL + + D++  +   T  R+    + F  
Sbjct: 52  VDVAKRISEIIGVD---FEYVCQEWDGMIPALLANKFDLIIASMSITDKRKE--QIDFSS 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------LSGASICVQAGTTTELTLADYFKAHNMKYH 172
                    +    K +               G  I V+  +T      ++F A   K  
Sbjct: 107 PYRNSVGRIVGPVGKDLKLFDDKGQPVVGHFDGLRIGVERASTYF----EWFSAKLPKAD 162

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------L 226
            ++++  E +    +  R D    +    +   L+ +   ++  +       P      +
Sbjct: 163 LVLYDSNEAMYLDLKNGRVDVIMTNPMKAHLSFLSGEGKGKYEFIG-PEVNEPKFFGPGV 221

Query: 227 APAIIQGDTEWYNIVSWTH 245
              + +G+ E  + +S   
Sbjct: 222 GVGLRKGNDELRDKISAAI 240


>gi|323142443|ref|ZP_08077264.1| ABC transporter, substrate-binding protein, family 3
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413088|gb|EFY03986.1| ABC transporter, substrate-binding protein, family 3
           [Phascolarctobacterium sp. YIT 12067]
          Length = 258

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 8/217 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G++             +  G D+D  R           ++++ P++   +   L+
Sbjct: 27  KKMVIGLDDNFAPMGYRNEKNEIVGMDIDLAREACKRAG---MEVEFKPIDWGAKEAELK 83

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           SK+ID +         RE   G+        + Q  ++ K   I ++  L G  + VQ  
Sbjct: 84  SKRIDAIWNCFTVNPEREKVYGM--SKPYINNSQLVVVPKDSPIKTLEDLKGKIVAVQDD 141

Query: 154 TTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +T    L                 +     I       R DA   D            +P
Sbjct: 142 STGSYLLEQPAHKELAASMKEVRKYPDFAAIYMEIDNKRVDAAIVDAVLARGYYDK-KKP 200

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             + IL   +    +A A  + D ++ + +      M
Sbjct: 201 GAYRILEQNMGDEVVAIAFRKDDKDFKDRIDKAMDEM 237


>gi|302333524|gb|ADL23717.1| amino acid ABC transporter protein [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 485

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|15889639|ref|NP_355320.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15157537|gb|AAK88105.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 256

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 98/273 (35%), Gaps = 24/273 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVD 62
            FF ++L       ++F+ +A           ++ GI N     F    A+G W+G+++D
Sbjct: 2   KFFATLLAGTAFAVSAFTASAD----------VRFGIMNESYPPFFAKDASGKWQGWEID 51

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+ + +     K   + L+      ALQ+K+ D++  +   T  RE    + F    
Sbjct: 52  LMDAVCAEM---KEKCSIVELSWDGLIPALQTKKFDVIWSSMSNTQEREKV--IDFTNKY 106

Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y      I  K +   ++   + G +I +Q  T        YF A         ++ ++E
Sbjct: 107 YNTPSKLIGAKGEKPGAAPEDVKGKTIGIQVATIQSEYYKKYFAA---VADEKTYQTLDE 163

Query: 182 IDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 A R D   GD   L   +K    +     +      K  +   +  G  +    
Sbjct: 164 AFQDLAAGRIDYVFGDSLVLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTE 223

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           +     A + A          ++++K   + D+
Sbjct: 224 LKNKLNAAIAA---VRASGKYDEITKKYFSFDI 253


>gi|311898837|dbj|BAJ31245.1| putative ABC transporter substrate-binding protein [Kitasatospora
           setae KM-6054]
          Length = 316

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 86/240 (35%), Gaps = 12/240 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71
             +         + + +I+KRG+L  G++     +    + +G  +GFD+D  RA++ ++
Sbjct: 58  TGVSLPPAQQAGARIQEIRKRGYLVVGVDQSAYNWGYRDSLSGKIEGFDIDLARAVAKSV 117

Query: 72  FDDPSKIQYLPLNAKERFLALQS--KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
             D +K+    +   +R   LQ   + ID++ R    T   +    +AF    +   Q  
Sbjct: 118 LGDENKLVLKTIATADRVKLLQQQPQPIDLIVRAMTITC--DRMKQIAFSAPYFKVSQRV 175

Query: 130 IMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +  K     S    L G  +C    +++   L       +     +  +   +       
Sbjct: 176 VAPKTAHADSVAKALGGKRVCAALNSSSHTELKANA---HGAASIVTPDNQLDCLVLMEL 232

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              DA   D S   A+   ++      +  +    + +   + Q DT+    V+      
Sbjct: 233 GEADATLSDSSLAAAMVAQDE---TMELAGESFLPTYMGVGMNQRDTDLVGWVNQVLVDW 289


>gi|229056202|ref|ZP_04195628.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH603]
 gi|228721136|gb|EEL72668.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH603]
          Length = 264

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +     V+ + L   F     +  S       +   +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNSKKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL   +   P  +       +     LQSK+ D++  +   T  R     + F
Sbjct: 61  FDVEIGEALGKKMGMKPVPVT---NPWETLIQGLQSKKYDVILGSMAITEER--LKAVNF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNISISSPEDLKGKKIGVVKASTFKTLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S        ++   +  AI + + + 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIHKDNKDM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|167563465|ref|ZP_02356381.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           oklahomensis EO147]
 gi|167570633|ref|ZP_02363507.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           oklahomensis C6786]
          Length = 264

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFDVD   A+ + +     K  ++         ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLAGFDVDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R     + F    Y      I  K  G + + + L G  I V  
Sbjct: 87  ARKFDAINSDMTITDQRRR--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRIGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E+     +         + ++  +      ++ R DA   D  A     L+  + +
Sbjct: 145 GTIQEVYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D +    V+    
Sbjct: 203 GFAFAGGHVSDAEILGAGVGFGLRKNDAQLKTAVNQALK 241


>gi|39997743|ref|NP_953694.1| amino acid ABC transporter amino acid-binding protein [Geobacter
           sulfurreducens PCA]
 gi|39984635|gb|AAR36021.1| amino acid ABC transporter, amino acid-binding protein [Geobacter
           sulfurreducens PCA]
 gi|298506679|gb|ADI85402.1| amino acid ABC transporter, amino acid-binding protein [Geobacter
           sulfurreducens KN400]
          Length = 269

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 74/243 (30%), Gaps = 22/243 (9%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           + + +  ++ L  +                 L  G+      F      G   G  VD  
Sbjct: 14  WLIGLFFVLFLNVSLALAAGDS---------LVVGMELAYPPFEMTDTTGKPTGVSVDLA 64

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             L  A+      I    +       AL++ +ID++  +      R     + F      
Sbjct: 65  TELGKALGKK---IVIQNMAFDGLIPALKTGKIDLIISSMTANAER--GKSIDFSDPYLN 119

Query: 125 DGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G   ++ K+     +  L   G S+ V+ GTT     +   K        +V ++    
Sbjct: 120 TGLCLLVKKESPAKGIGDLDQPGRSVAVKKGTTGHAWASKNLKKA----RVLVLDKEAAA 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  + DA+  D  + Y  +      +    + +   K   A  I +G+ +    V+
Sbjct: 176 VLEVVQGKADAFIYDQMSTY--QNWQKNRATTRAILEPFQKESWAVGIRKGNDDLRKKVN 233

Query: 243 WTH 245
              
Sbjct: 234 AFL 236


>gi|288961663|ref|YP_003451973.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288913943|dbj|BAI75429.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 260

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 79/245 (32%), Gaps = 13/245 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               +L    +   S +   + L  IK  G LK G       F    A+G   GFDV+  
Sbjct: 8   LVAGLLQAAAVTAGSSAWAQADLDRIKADGALKIGTEGTYAPFTYHDASGALVGFDVEIG 67

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R ++  I      +++L          L +++ D +      T  R+      F      
Sbjct: 68  REIAKRIGVK---VEFLEGKWDGLIAGLDARRYDAVINQVGITEARKA--KYDFSDPYIT 122

Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                I+      I   + L G     Q+ T+    LA+   A       +  +  ++  
Sbjct: 123 SRAVLIVRGDNDAIKGFADLKGRKSA-QSLTSNFGKLAEAAGA-----QLVGTDGFDQSI 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R DA T + S  +     +   ++  I+            + +G+ +    ++ 
Sbjct: 177 QLVLNGRADA-TVNDSLSFLDFKKHKPDADVKIVATRDDADQSGIIVRKGEAKLVAAINE 235

Query: 244 THYAM 248
              A+
Sbjct: 236 ALAAI 240


>gi|186474524|ref|YP_001863495.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184198483|gb|ACC76445.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 256

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 87/250 (34%), Gaps = 23/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++ + +L   +  + A     I      + G++     F    A+G   GF+
Sbjct: 1   MKK-----LISVFVLSSMAVGSYAKDWSAI------RFGVDPTYPPFESKDASGKLAGFE 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  ++  +      AL++++ D +      T  R   +   F  
Sbjct: 50  IDIGNEVCARL---RAKCVWVENDFDGMIPALKARKFDAVLSGMSITAQRASQIA--FTN 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G + +   L   +I VQ GT  E     ++ + N     + ++  
Sbjct: 105 KLWNSSLRLVARKDSGLLPTAESLKSKTIGVQQGTVGETYAKQHWASSN--VTVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIISKSPLAPAIIQGDT 235
           +++ A     R DA            L   R + +  +     D  S    A  + + DT
Sbjct: 163 DQVYADLTVGRLDALLIGDVQAQMGFLQTPRGAGYAFVGDRVVDPTSDKGAAIGLRKEDT 222

Query: 236 EWYNIVSWTH 245
           +    ++   
Sbjct: 223 DLREKINQAI 232


>gi|187478361|ref|YP_786385.1| ABC transporter solute-binding protein [Bordetella avium 197N]
 gi|115422947|emb|CAJ49476.1| ABC transporter, solute-binding protein [Bordetella avium 197N]
          Length = 252

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 72/207 (34%), Gaps = 7/207 (3%)

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           G++                GFD+D  R  S  +  +   +++ P++   +   L  K++D
Sbjct: 30  GLDDNFPPMGFRDEKNQLVGFDIDMAREASRRMGVE---VEFKPIDWSAKEAELNGKRVD 86

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
           +L      T  R+ ++   F      + Q  ++     I + + L+G  +  Q G++   
Sbjct: 87  VLWNGLTITDERKKNIA--FTQPYMANHQIILVTASSPIQTKADLAGRVLGAQDGSSAVD 144

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +              +F           A R D     +  +    L + RP E+ +L 
Sbjct: 145 AIKKEEAVAKSLKELKLFGDNVTALMDLSATRLD--GVVVDEVVGRYLASKRPGEYRVLD 202

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +          + + DT+ +  +  T 
Sbjct: 203 ENFGTEDYGVGVRKDDTDLHAKLDRTL 229


>gi|148655938|ref|YP_001276143.1| extracellular solute-binding protein [Roseiflexus sp. RS-1]
 gi|148568048|gb|ABQ90193.1| extracellular solute-binding protein, family 3 [Roseiflexus sp.
           RS-1]
          Length = 288

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 36/229 (15%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNA-------------------------SILGDIKKR 33
           M K     ++ +   ++        A                           L  I+  
Sbjct: 1   MQKQTLIMLAFIAASLVMSACGGAPAAQPTQPAAQPTQPTAQPTQPAAQTDGKLAQIRAA 60

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G +     +  +  NG++ GFD+D  RA+   +  +   ++   +       +LQ
Sbjct: 61  GKLIVGTSADYPPYESIDENGNFVGFDMDLIRAVGEKLGVE---VEIRDMPFDSLIASLQ 117

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQ 151
             +ID +      T  RE    + F          FI      I  +     +G +I  Q
Sbjct: 118 EGKIDAVIAAMQATAEREE--KVDFTIPYRMTKDAFIGAGNTTITLNKPEDAAGLTIGAQ 175

Query: 152 AGTTTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDI 198
            GT  E  +     A  +        +ER ++      + R      D 
Sbjct: 176 TGTVQEGWIQKNLVATGLTPADKVFSYERADQAALDLASGRLQLVLMDA 224


>gi|303229960|ref|ZP_07316734.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella atypica ACS-134-V-Col7a]
 gi|302515326|gb|EFL57294.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella atypica ACS-134-V-Col7a]
          Length = 260

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 88/251 (35%), Gaps = 15/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++ +  +   +   +       ++ G L+ G  T    F   + +  + GFDV
Sbjct: 5   KKLTAIALVAVAAMGLLAGCGSEKS-KMTQEAGVLRVGSETTFPPFEFTEGD-KYVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++  +     K+++  +       A+QS  ID+++   + T  RE    L F  +
Sbjct: 63  DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 117

Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +      I ++ +L+G ++ VQ GT                      +  
Sbjct: 118 YFDQGGFITVVRKNNTSIHNMDELAGKTVGVQIGTVPVD-----MAKAIPNTTVKEMDSN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I    +A   D    D  A+    L      +  ++ +      +   + +G+ E  +
Sbjct: 173 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADKDLKLVGEPTKAPGIVLGVKKGNKELQD 231

Query: 240 IVSWTHYAMVT 250
            V+     +  
Sbjct: 232 AVNKALKELKE 242


>gi|229587937|ref|YP_002870056.1| putative ABC transporter exported protein [Pseudomonas fluorescens
           SBW25]
 gi|229359803|emb|CAY46653.1| putative ABC transport system, exported protein [Pseudomonas
           fluorescens SBW25]
          Length = 267

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +     + +  A  + D  KRG LK G++   + F      G+  GF+
Sbjct: 2   MMKKYLSMLLLGVTALVAAAAVQAGAIDDAVKRGTLKVGMDPTYMPFEMTDKRGEIIGFE 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      ++ +         A  + + D++      T  R  +L L F  
Sbjct: 62  VDILKAMAKSMGVK---LELVSTGYDGIIPAFLTGKFDMIGSGMTLTQER--NLRLNFSE 116

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 +
Sbjct: 117 PFIVVGQTLLIRKELEGTIKSYKDLNDEKYRLTSKLGTTGEMVAKKLISKAKYHG----Y 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D       +         V L +  +  PLA  + +GD +
Sbjct: 173 DNEQEGVLDVVNGKADAFVYDAPYNVVAEKKVGNGK-LVFLEEPFTFEPLAFGLKKGDYD 231

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 232 SINFINNFLH 241


>gi|330970706|gb|EGH70772.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 254

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R+    + F   
Sbjct: 52  EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D            +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSVEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNAALKEIIA 237


>gi|323697765|ref|ZP_08109677.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323457697|gb|EGB13562.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 286

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 83/222 (37%), Gaps = 11/222 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            S L  I KRG ++ G +T    +A    NGD+ GF+++  R L+  +      ++++P 
Sbjct: 45  GSQLDVILKRGTIRVGFDT-FKPWAMKDKNGDYIGFEIEVARQLAKDMGVK---VEFVPT 100

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
                  AL + + DI+      T  R + +  +                 +G +S+   
Sbjct: 101 KWSGIIPALLTGKFDIIIGGMSVTPQRNLKVNFSLPYEYSGMSIVASRKLAEGRASIEDF 160

Query: 144 --SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
              G +I V+ GTT      ++          + F+   +        R  A        
Sbjct: 161 NNPGTTIAVRLGTTAAEAAKNFLPQAK----ILFFDEESQTIQELLNERVHAVVASNPLP 216

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             L          + L D  ++ P+A A+ +GD ++ N ++ 
Sbjct: 217 LTLSKEYAD-QLFLPLKDDFTREPIAFAVKKGDLDFLNWLNN 257


>gi|238919598|ref|YP_002933113.1| hypothetical protein NT01EI_1697 [Edwardsiella ictaluri 93-146]
 gi|238869167|gb|ACR68878.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 257

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 86/246 (34%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L L +L   + + ++  L +++  G +K G       +    A+G   GFD
Sbjct: 1   MMKKTALALLALTLLSGGAQAQHSDDLSEMRSAGSIKFGTEGTYPPYTYHDASGKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA+++ +   P    ++          L +K+ D +      T  R+      F  
Sbjct: 61  VDIARAVAAKMGLKP---VFVEGRWDGLIAGLSAKRYDAVINQVGITPERQA--KFDFSD 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      +++   L G     Q+ T+    LA+++ A       +  +  
Sbjct: 116 PYIGAKAVLIVRSDNTRLNNFDDLRGQK-AAQSLTSNYARLAEHYGA-----ELVPTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R  A   D  +    +          ++     ++  A  + +G  +   
Sbjct: 170 NQSLELVISGRAVATLNDNLSYLDFRQHKPSAP-LKVVAVADQRADSAILVRKGQPQLVA 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 ALNHAL 234


>gi|171779920|ref|ZP_02920824.1| hypothetical protein STRINF_01707 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281268|gb|EDT46703.1| hypothetical protein STRINF_01707 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 269

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 15/278 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K      L L +   T+ ST+ +    I+ +G +     +    F             
Sbjct: 1   MKKFLGGLFLLLALGTMTACSTSGTSQKSIQNKGKIVIATESEFAPFEFKTLIDGKDTLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D++  +A++  +        +  ++      ++ S + DI       T  R+      
Sbjct: 61  GADIELAKAIAKELDVKAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AYE 115

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K      +S+  L+G S+  Q G+  E    D   +       + 
Sbjct: 116 FSDAYYEAENVVILKKADLATYTSLESLAGKSVGAQKGSIQENIAKDQLPS----SSLVS 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                E+    + ++  A   + +            +   +          A A  +G  
Sbjct: 172 LTSNGEMINELKNNQLQAVVLEKAIAEGYISQTPDLAIADMPLKSTDTDAYAVAFAKGTD 231

Query: 236 -EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
            +    V+        + E     +  +  ++ ++  +
Sbjct: 232 KKLIASVNKVIKKAKKSGEFDAWIEKASTYTQSSSESE 269


>gi|257483719|ref|ZP_05637760.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289650582|ref|ZP_06481925.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298489315|ref|ZP_07007330.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156166|gb|EFH97271.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|320326492|gb|EFW82544.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320331783|gb|EFW87721.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330954814|gb|EGH55074.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae Cit 7]
 gi|330987164|gb|EGH85267.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331012128|gb|EGH92184.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 254

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R+    + F   
Sbjct: 52  EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D            +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNAALKEIIA 237


>gi|224826540|ref|ZP_03699641.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224601141|gb|EEG07323.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 257

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 28/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L L        +              L+   +     F  V ANG   GF+
Sbjct: 1   MKKPIILALLSLTAPLAAHSAE------------TLRIATDATYPPFEYVDANGKVSGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A+   +     + + +          LQ K+ D +  + + T  R     + F  
Sbjct: 49  VDFAYAVCKEM---KVQCEVVNQPWDGLIPGLQVKKYDAIMSSMNITDERRK--AVDFSK 103

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y     F+  K        + LSG +I VQ GT  +  +   F           +   
Sbjct: 104 VYYLMQNRFVTAKGHKGEIQPAALSGKTIAVQTGTPQDRFVTQQF---GKSATIKRYVNA 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-------DIISKSPLAPAIIQ 232
           ++      + R D   G+   L    L          +        D +    +A A+ +
Sbjct: 161 QDPMMELTSGRADYTFGNTVQLQKGFLETAPGKGFEFVGPVFDGRQDKVLGEGVAVALHK 220

Query: 233 GDTEWYNIVSWTHYAM 248
            D+      +    A+
Sbjct: 221 QDSALKARFNAAIDAV 236


>gi|289626774|ref|ZP_06459728.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289648365|ref|ZP_06479708.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868473|gb|EGH03182.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 273

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVRQV 249


>gi|88597125|ref|ZP_01100361.1| cjaC protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562373|ref|YP_002344152.1| histidine-binding protein precursor [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|88190814|gb|EAQ94787.1| cjaC protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360079|emb|CAL34871.1| histidine-binding protein precursor [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925990|gb|ADC28342.1| histidine-binding protein precursor [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315928978|gb|EFV08224.1| histidine-binding protein precursor [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 251

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++++ L+ LF  + S + +   +      LK G       F     N    GFD
Sbjct: 1   MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++     T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + + L G  I VQ GT     L +              + +
Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                A + ++ DA   D           + P       +       + A  +   + 
Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQKN 223


>gi|157165339|ref|YP_001466156.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Campylobacter concisus 13826]
 gi|112800359|gb|EAT97703.1| L-cystine-binding protein TcyA [Campylobacter concisus 13826]
          Length = 259

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 13/243 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F    LC++    +  S +A+    IKK G ++         F+      +  G+DV+  
Sbjct: 7   FKFGALCVVGCLLSLNSASANSYEQIKKDGVIRIATEGVYSPFSFHNEKDELMGYDVEIA 66

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA++  +   P   +++  +      A  + + D++      T  R+      +      
Sbjct: 67  RAVAKKLGVKP---KFIEASWDAMLAAFDAGKADVVFNQVSITDERKK--KYDYSVPYML 121

Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                ++HK    I S + L G        +    T+             +V + + +  
Sbjct: 122 SYSAIVVHKDNNDIKSFADLKGKRSVHSVNSMWIPTVE------KYGAKLVVADSLSDQI 175

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R D    D    Y     +       I+         A  + +G+ E  N ++ 
Sbjct: 176 NLIITKRADDTIDDAVMFYDYIKQHPNAP-IKIIEAGDEPMYTAAIVKKGNKELLNKINN 234

Query: 244 THY 246
              
Sbjct: 235 ALN 237


>gi|330961755|gb|EGH62015.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 273

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNAADDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|161870463|ref|YP_001599635.1| polar amino acid transport system substrate-binding protein
           [Neisseria meningitidis 053442]
 gi|161596016|gb|ABX73676.1| polar amino acid transport system substrate-binding protein
           [Neisseria meningitidis 053442]
          Length = 268

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252


>gi|68535318|ref|YP_250023.1| putative extracellular solute-binding protein [Corynebacterium
           jeikeium K411]
 gi|260578467|ref|ZP_05846381.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium jeikeium ATCC 43734]
 gi|68262917|emb|CAI36405.1| putative extracellular solute-binding protein [Corynebacterium
           jeikeium K411]
 gi|258603489|gb|EEW16752.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium jeikeium ATCC 43734]
          Length = 361

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 14/222 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            I +RG L  G+   L         +GD  GF+VD  R ++  IF DP++I++  + ++E
Sbjct: 96  QIMRRGRLVVGVAQSLNRLGFRDPVSGDVAGFEVDLAREIARDIFGDPNRIEFRYVESRE 155

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL+S  +DI+ R    TL R     L F           ++     I S + L   +
Sbjct: 156 RAEALKSGDVDIVVRTMSPTLSR--QSKLEFSIPYLQVHSRLLVLSDSQIESFNDLHNKT 213

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV   +T+ + +  Y          ++ +   +   A +  + DA   D + L  L+  
Sbjct: 214 VCVTRDSTSAVRVKQY-----DVGRLLLTQAWTDCLMAMQRFQADAIFTDDAILTGLRAQ 268

Query: 208 NDRPSEHVILPDIISK----SPLAPAIIQGDTEWYNIVSWTH 245
           +   +     P+        SP  P   +  T     V+ T 
Sbjct: 269 DPYTTLVADAPETSYYSVAISP--PGFPKNTTGLVMQVNSTM 308


>gi|295702708|ref|YP_003595783.1| L-cystine import ABC transporter L-cystine-binding protein TcyA
           [Bacillus megaterium DSM 319]
 gi|294800367|gb|ADF37433.1| L-cystine import ABC transporter, L-cystine-binding protein TcyA
           [Bacillus megaterium DSM 319]
          Length = 273

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 13/229 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S+   +   +KK G L  G       F          GFDV+  + ++  +        +
Sbjct: 36  SSQEDLYNKVKKDGVLTIGTEGTYPPFTFHDDKQKLTGFDVELAQEVAKRLGVKAE---F 92

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139
                   F  L +K+ D+++         +      F       G   I+ K +  I S
Sbjct: 93  KETQWDGMFAGLDAKRFDMIANEVGI--REDRQKKYDFSDPYIQSGAVLIVRKDEKDIKS 150

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G     Q+ T+    +A  + A+         E   +      A+R DA   D  
Sbjct: 151 FKDLKGKKSA-QSLTSNYKDMAQSYGAN-----ITSAEGFAQAVELMSANRVDATINDKL 204

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +    K  +       I  +    +       +   +  + V+     M
Sbjct: 205 SFLDYKKKHPNAP-IKIADEKSDGAASGFMFRKDSGKLVDEVNKALKDM 252


>gi|90418079|ref|ZP_01225991.1| periplasmic substrate-binding protein, ABC-type amino acid
           transporter [Aurantimonas manganoxydans SI85-9A1]
 gi|90337751|gb|EAS51402.1| periplasmic substrate-binding protein, ABC-type amino acid
           transporter [Aurantimonas manganoxydans SI85-9A1]
          Length = 265

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 81/251 (32%), Gaps = 19/251 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             A      K    +  G       F  + A+G+ +GFDVD  +AL + +  +     ++
Sbjct: 21  AQAQESDADKDWSKVVIGTEGAYPPFNFLDASGELQGFDVDIAKALCAEMKVE---CSFV 77

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--S 139
             +      ALQ+   D L  +   T  RE  +   F    Y       + K   I+  +
Sbjct: 78  TQDWDGIIPALQNGNFDALVASMSITPEREEQIA--FTNKYYQTPPAIAVPKDSDITEAT 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G +I  Q  TT       YF           +   EE      + R DA   D+ 
Sbjct: 136 AEALAGKAIGAQTSTTHARAAESYFP----DAEVRQYPTAEEYKLDIESGRVDAVVDDVV 191

Query: 200 ALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            L     ++        L D +   P      +   + QG  +   + +    A+     
Sbjct: 192 VLDEWLKSDAGACC--KLLDTLKADPAIYGKGIGIGLRQGSDKLAGMFNDAIAAIRENGT 249

Query: 254 LGITQKNINQV 264
               QK   + 
Sbjct: 250 YDEVQKKYFEF 260


>gi|222102916|ref|YP_002539955.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739517|gb|ACM40250.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 279

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 87/233 (37%), Gaps = 13/233 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L DI     L+C     +  FA       +  GFDVD C A+++ +          P+
Sbjct: 25  DQLADIMAAKTLRCATFADVPPFASPDPKTREMAGFDVDLCNAIAAKLGVKAE---IKPV 81

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + + R   ++  ++DI   N  +TL R   +   F    Y   +  I+       + +  
Sbjct: 82  SVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADTAGKTKADF 139

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALY 202
           SG  +    G+T+E+++         K  P+ F+       A +  + +    + ++   
Sbjct: 140 SGKRLASTKGSTSEMSI------KLNKSDPLTFQDTASAYLAVQQGKAEGMVANTMTTTK 193

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +  +  +     ++ D +   P+   + + +      ++ T  A+    E+ 
Sbjct: 194 FVNESQTKGKRMRMIDDPMLYQPIGVGMKKDEPALTAKINDTLRALDADGEIN 246


>gi|283852210|ref|ZP_06369483.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
 gi|283572436|gb|EFC20423.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
          Length = 250

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 90/251 (35%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L +      S  A+      +      GI+ G   F  V  +G   GFD
Sbjct: 1   MRKRLGLLLAALAVFVLCCGSLAAA------EEKVYVNGIDFGFPPFGFVDKDGKPTGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +     K+++ P++      AL +K+IDI++     T  R  +  + F  
Sbjct: 55  VESLDWIAKKMG---FKVKHQPMDWDGIIPALLAKKIDIIASGMSATAER--AQKVDFSI 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  ++  K+  +    L+ G  + +Q GT T   L +       K+  + ++  
Sbjct: 110 PYYEVTQVLVVPAKETATLPQLLTSGKKLGIQRGTVTAKLLEEMAAKPEYKFEAVPYDST 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +      +  R      D +     K     P   +             A+ + D E+ +
Sbjct: 170 DLSMEDVKVGRIAGSGMDSTI---AKELMKNPGFKIAGTFDADPEKYGYAMRKEDKEFQD 226

Query: 240 IVSWTHYAMVT 250
            V+     ++ 
Sbjct: 227 KVNKGLKLLMA 237


>gi|269962668|ref|ZP_06177013.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832591|gb|EEZ86705.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 258

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L + +L  T  +   S L +I  +G L+ G                 ++GF
Sbjct: 1   MKKTLL--ALGMCLLAMTQVAHAESRLQEILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++++  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEFVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  +        +    GT  E  + D+F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFDKPDVKVAATLGTVQEKMVKDFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|120612399|ref|YP_972077.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120590863|gb|ABM34303.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 302

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 89/232 (38%), Gaps = 9/232 (3%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
           F +++    +        +     IK+ G L+ G       F+ +   +G  +GFD    
Sbjct: 36  FDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKLRGFDAGLA 95

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  I  D SK+Q+  +N+  R   L + Q+D++      T  R     ++F    Y 
Sbjct: 96  QLITRYILGDASKVQFTQVNSSTREQVLINGQVDMVVATYSITPARAE--KISFAGPYYT 153

Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              G ++    + I SV+ L G  +  QAG+T    LA +            F+  +E  
Sbjct: 154 SQAGVLVKASNQAIQSVNDLGGRKVATQAGSTGPAILAQFAPK----STVQEFQTHQEAL 209

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            A R  R  AY  D + L    L+       +      ++ P    + +G  
Sbjct: 210 DALRQGRVAAYVTDHTLLLNT-LSLGTADAKLAGAPFGAQDPYGIGLPKGSD 260


>gi|221200818|ref|ZP_03573859.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2M]
 gi|221207014|ref|ZP_03580025.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2]
 gi|221210264|ref|ZP_03583244.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD1]
 gi|221169220|gb|EEE01687.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD1]
 gi|221173088|gb|EEE05524.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2]
 gi|221179390|gb|EEE11796.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia multivorans CGD2M]
          Length = 260

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ S  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKDASGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++  +      AL++++ D +  +   T  R+  +   F  
Sbjct: 53  VDLGNEICRRL---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +   L G SI V+ GT  E     Y+         + ++  
Sbjct: 108 KLFNTPTRLVAKKGSGLMPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +++ A   A R D    D        L   R +        +             + + D
Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGASFDFAGKDLDDPKTLGEGAGIGLRKED 225

Query: 235 TEW 237
           T+ 
Sbjct: 226 TDL 228


>gi|121635265|ref|YP_975510.1| histidine-binding periplasmic protein [Neisseria meningitidis
           FAM18]
 gi|120866971|emb|CAM10733.1| histidine-binding periplasmic protein [Neisseria meningitidis
           FAM18]
 gi|308389741|gb|ADO32061.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis alpha710]
 gi|325130652|gb|EGC53393.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis OX99.30304]
 gi|325132704|gb|EGC55387.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis M6190]
 gi|325136726|gb|EGC59326.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis M0579]
 gi|325138590|gb|EGC61149.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis ES14902]
 gi|325144831|gb|EGC67119.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis M01-240013]
 gi|325201717|gb|ADY97171.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis M01-240149]
 gi|325208539|gb|ADZ03991.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis NZ-05/33]
          Length = 268

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252


>gi|330824298|ref|YP_004387601.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|329309670|gb|AEB84085.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 251

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 77/212 (36%), Gaps = 14/212 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G +        V  NG   GFD++   A++ A+     +++++ ++ K     L S
Sbjct: 29  VLRVGTDATFPPMEFV-ENGKRTGFDIELVEAIAKAMGK---QVEWVDIDFKGLIPGLIS 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAG 153
           ++ D+       T  R     + F    Y  G   ++ +    I  +S L G  + VQ G
Sbjct: 85  RRFDMAVSAIYITDERRKV--VDFTEPYYAGGLVAMVKEGNTSIRKLSDLDGKRVSVQVG 142

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T +   L      +  K   I  E+ +E+       R DA      A Y    T      
Sbjct: 143 TKSVGFLTQ----NYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPG--- 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +L + ++      A+ +   E    V+   
Sbjct: 196 LRVLEEQLTTEEYGMALRKDTPELTKAVNAAL 227


>gi|294101238|ref|YP_003553096.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
 gi|293616218|gb|ADE56372.1| extracellular solute-binding protein family 3 [Aminobacterium
           colombiense DSM 12261]
          Length = 250

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 89/257 (34%), Gaps = 17/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L  + +  +S S  A  L      G +  G  +    +       + +GFD
Sbjct: 1   MKKITGFLLLLCLFMALSS-SAYAGALDK----GTIIVGTESTYPPYEFRDEKNNLQGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    ++  +  +   ++++ +       AL +++IDI++     T  R   +   F  
Sbjct: 56  IELMNTIAEKLGKE---LEWVDMPFDSLIPALLAQKIDIVAAGMSATPERAKRVA--FST 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   FI+ K    + S+  +   +I VQ GT     + + F           F++ 
Sbjct: 111 PYEVSMSAFIVKKDNIALKSLDDMKSKTIAVQLGT-----VQETFSRTVEGAKVKTFQKF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           ++        R DA   DI          D      V     I+ +  A A+   +  + 
Sbjct: 166 DDCVREVMLGRADASLMDIPVAKKFLEQKDFDGKIAVAFEQEITGAGKALAMNLEEKAFA 225

Query: 239 NIVSWTHYAMVTAEELG 255
             +S     M  + EL 
Sbjct: 226 EAISSVLDEMQKSGELE 242


>gi|218548235|ref|YP_002382026.1| lysine/arginine/ornithine ABC transporter periplasmic-binding
           protein [Escherichia fergusonii ATCC 35469]
 gi|218355776|emb|CAQ88389.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding
           component of ABC superfamily [Escherichia fergusonii
           ATCC 35469]
          Length = 260

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      E       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKEFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|119898554|ref|YP_933767.1| putative amino acid-binding protein [Azoarcus sp. BH72]
 gi|119670967|emb|CAL94880.1| putative amino acid-binding protein [Azoarcus sp. BH72]
          Length = 272

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 9/202 (4%)

Query: 3   KDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +  F     + +      +   A +L +++K G L+  +      F  V  +   +G+D+
Sbjct: 14  RSLFGLAAGIAVASTIGLADARADVLANVQKAGTLRVAVPQDFPPFGSVGTDLKPRGYDI 73

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++  +      ++ +P+ +  R   L + + D++  +      RE    + F   
Sbjct: 74  DMANLIAKELGVK---VELIPVTSTNRIPYLTTGKADLVISSLGKNPDREKV--IDFSEA 128

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 G    +   ++ V +L G ++ V  G+  +L L         K     FE    
Sbjct: 129 YAPFFNGVFGPEDVKLTKVEELDGKTVGVTRGSVEDLELTKIAS---PKVTIKRFEDNNA 185

Query: 182 IDAAYRAHRCDAYTGDISALYA 203
             +AY   +            A
Sbjct: 186 TISAYLTGQVQFVATGNVVAAA 207


>gi|300173515|ref|YP_003772681.1| amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811]
 gi|299887894|emb|CBL91862.1| Amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811]
          Length = 491

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 122/351 (34%), Gaps = 51/351 (14%)

Query: 3   KDFFVSILCLIILF-----FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAE---VK 51
           K   ++ + LI+L      F   +  A        IKKRG L  G++     F     V 
Sbjct: 7   KKLVMTAMGLILLLPMFLVFVPQTQAADTDPAYAAIKKRGVLIVGLSADYAPFEFHATVG 66

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 GF+V   + ++  +      IQ   +       A+Q+ +ID++    + T  RE
Sbjct: 67  GRDQIVGFEVSMAKQIAKDLGVK---IQIKEMGFDGLIGAVQTGKIDVIISGINATPERE 123

Query: 112 ISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
               + F        Q  ++ K    +  ++V   SG  +  Q  TT E  + +   +  
Sbjct: 124 KV--VDFSKSYMSPKQTILILKKNAPQFTTNVDSFSGKKVGAQRQTTQETFVQNNMPS-- 179

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLA 227
                +  ++V ++ +   A +      +     A        +  VI P        ++
Sbjct: 180 --STLVSIQKVPDLVSQLSAGKISGVVLNDPISEAYAQQ--NKALQVIYPKPNESEGAVS 235

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGI--TQKNINQVSKDTTNPDVQRFL--GIDKSS 283
            A+ +      + ++ +   +V++ +L     + N    +K +           G   + 
Sbjct: 236 IAMRKNSPVLQSKINASIDGIVSSGKLKAYQKEANTLMFAKQSFWAKYGNLFIKGTLITL 295

Query: 284 NI-------GEALG-------LTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
            +       G  LG       L+ ++   I++ +GN   ++   +   + L
Sbjct: 296 ALAAIAVVIGAVLGTVLALFKLSPNF---ILKSLGN---IYIEYV-RGTPL 339


>gi|323526705|ref|YP_004228858.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323383707|gb|ADX55798.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 260

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 64/248 (25%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L+     S    A     IK  G  + G       F     +G   GFD
Sbjct: 1   MKSIRSILLVALLHTVAVSPVFAADEFAQIKSSGVFRIGTEGTYAPFTYHDESGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +   P   Q++          L   + D +      T  R       F  
Sbjct: 61  VEIGTQIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDAR--KQKYDFSD 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I +   L G        +           A +     I  +  
Sbjct: 116 PYITSHAALIVRSDNNTIKNFDDLKGKKSANTLTSNFGKI------AASHGAEVIPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237
            E      A R DA   D  +    K         +   D    S    A  I +G  E 
Sbjct: 170 NESIDLLTAGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSADSSDKSAVLIRKGSPEL 229

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 230 VAAINKAL 237


>gi|197295420|ref|YP_002153961.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|195944899|emb|CAR57508.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 268

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + +  ++L   +I  F +   +A  L  I K G L+  +      F  V  +   +G+D
Sbjct: 10  RRTWLAALLAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+ A+      ++ +P+N+  R   L + ++D++  +   T  RE    + F  
Sbjct: 70  IDMAGLLAKALGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 QG        +S+ + L+G ++    G   E+ L+              FE   
Sbjct: 125 AYAPYFQGVFGPSDVKVSAPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P     +  +I  SP    + + +      
Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238

Query: 241 VSWTH 245
           +    
Sbjct: 239 IDDAI 243


>gi|257482033|ref|ZP_05636074.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|298485706|ref|ZP_07003785.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298159732|gb|EFI00774.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330887839|gb|EGH20500.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330988580|gb|EGH86683.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008891|gb|EGH88947.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 273

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|167646870|ref|YP_001684533.1| cystine transporter subunit [Caulobacter sp. K31]
 gi|167349300|gb|ABZ72035.1| extracellular solute-binding protein family 3 [Caulobacter sp. K31]
          Length = 265

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 77/223 (34%), Gaps = 14/223 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  ++    L+ G+      F     +G   GF+VDF +AL++ +   P    + P    
Sbjct: 36  LKRVESSKTLRIGLEGTYPPFNFQDKDGQLAGFEVDFAKALAAQMKVKPE---FSPSPFA 92

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145
               AL++K+ID++      T  R       F       G   I+   +  IS+ + L+G
Sbjct: 93  GLLGALEAKRIDVVINQITITPERAA--KYDFSRPYTISGIQIIVRAGQTGISTPADLAG 150

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + V  GT  E  L               ++         +A R DA   D        
Sbjct: 151 KKVGVGLGTNYESWLRKTVPTA----IVRTYDDDPTKYQDLKAGRIDAVLNDRLVAADFV 206

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            T+    + V      +   +  A+++ D      +     A+
Sbjct: 207 KTSP---DFVASGPAFASQGMGVAMLR-DPALKVAIDQAIDAL 245


>gi|241206673|ref|YP_002977769.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860563|gb|ACS58230.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 265

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +  +   + +    + +  A  L DIK  G +  GI +    F+   A+   KG+D
Sbjct: 5   MKLRY-TATAAIAVFGILAGAAQADELADIKAAGEINIGIFSDFPPFSSASADMSIKGYD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +      +  + +  + R   L   ++D+L         +E +  + F  
Sbjct: 64  VDVAQKIADGLGVK---LNLVSVTGQNRIAYLNDDRVDLL---MSVGYSKERAEVIDFAA 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      +S    L+  ++ V  GT  + +L               FE   
Sbjct: 118 PYAPYYIAVIGPAALKVSGKEDLADKTVAVNRGTLEDTSLTAVAP---GSAAIQRFENYN 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  A+ + +             +    D          + S S +A  + +G+     +
Sbjct: 175 SVIQAFISGQTQLMVVGNDVGAQVLARQDELKPEQKFQLLSSPSHIA--LRKGEEGLKKV 232

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           V+ +  AM++   L  + K+  +   +  N
Sbjct: 233 VNDSVAAMISDGSLDASSKSWLKAPLNPEN 262


>gi|187927127|ref|YP_001897614.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|309780170|ref|ZP_07674921.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
 gi|187724017|gb|ACD25182.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
 gi|308920873|gb|EFP66519.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 275

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 10/231 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                  +A  L +I+K G ++  I      F  +  +   +G+D+D    ++  +    
Sbjct: 31  LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMAGLIAKELGVKA 90

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +    + +  R   L + ++D++  +      R     + F        +     K  
Sbjct: 91  ELVP---VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDV 145

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I   + L+G +I V  G+T +L L+    A         +E       +Y   +    T
Sbjct: 146 SIKGPADLAGKTIGVTRGSTEDLALSAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 202

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                  A+          + L   +  +P    + +G+    + V+    
Sbjct: 203 VGNIVANAVNERTK--LRQLDLKFPVEDTPCYVGVAKGEPALLDKVNTVIT 251


>gi|238757577|ref|ZP_04618761.1| Arginine-binding periplasmic protein 1 [Yersinia aldovae ATCC
           35236]
 gi|238704082|gb|EEP96615.1| Arginine-binding periplasmic protein 1 [Yersinia aldovae ATCC
           35236]
          Length = 243

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 84/248 (33%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L  ++                L+         F  + AN   +GFD
Sbjct: 1   MKKLIIAALLATVSLSTSAAE-------------TLRFAAEATYPPFEFIDANNKMQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          +L+ K+ D +    D T  R   +   F  
Sbjct: 48  IDLANALCKEM---QAECTFTNQAFDSLIPSLKFKRFDAVISGMDITPERLKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++ ++ L G  + +Q G+T +  L +           + ++  +
Sbjct: 103 PYYENSALFVAEKG-KVADLAALKGKRVGMQNGSTHQKYLMEQHPE----ITAVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      ND+       +       + L  A+ Q +TE  
Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKQNDQLVAVGDKVTDANYFGTGLGIAVRQNNTELQ 217

Query: 239 NIVSWTHY 246
             +     
Sbjct: 218 GKLDAALT 225


>gi|295106093|emb|CBL03636.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 281

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G + G   +  V  +G + GFD++  +A+   +  +   ++  P++   +   + S
Sbjct: 45  TLTVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEKMGWE---LKLEPIDWDAKDALIGS 101

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             I+ +                 F     ++ Q  ++ K  G  ++  L+G ++  Q  +
Sbjct: 102 GTINCIWNGFTM---ENREDDYTFSEPYMYNEQVVVVKKDSGAKNLEDLAGKTVLTQVDS 158

Query: 155 TTELTLADYFKAHNMK-------YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
                L +       +                        +   DA   D+S   A    
Sbjct: 159 AALHVLENDNAEEGGQAALAATFKELQTIGDYNNAFMQLESGMVDAVACDLSI--ASFQM 216

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +P  +V L  +      A    +GDTE    V+    
Sbjct: 217 AAKPDAYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALK 254


>gi|307547048|ref|YP_003899527.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307219072|emb|CBV44342.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 256

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 76/256 (29%), Gaps = 25/256 (9%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M +        S + L +      +     L             +   V F  +    G+
Sbjct: 1   MKRQLKSVSLASCIGLGLGASGLAAAQDQTLD---------VATDPSFVPFEMMDQETGE 51

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + +S     D +      ++      A+Q+  IDI       T  R     
Sbjct: 52  MTGFDMDIIKEISERAGFDYN---LRTMDFNGIIPAVQTGNIDIAIAGITITDERSKI-- 106

Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F    Y  G   +++     I +V  L G  +  + G+T+   L +            
Sbjct: 107 VDFSDPYYDSGLKLLVNADDDSIQTVEDLEGKKVGTKIGSTSYDYLEENL---GDSADIT 163

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    ++  A      DA   D                   +  +        A+++G 
Sbjct: 164 PYPGSSDMYMALLGGSVDAVFYDAP-NVGYFSQTKGEGRVKTVGPLYEGQQYGLALVKG- 221

Query: 235 TEWYNIVSWTHYAMVT 250
           +EW   V+    AM  
Sbjct: 222 SEWLEPVNEALAAMKE 237


>gi|297559648|ref|YP_003678622.1| extracellular solute-binding protein family 3 [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296844096|gb|ADH66116.1| extracellular solute-binding protein family 3 [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 283

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 19/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50
           M      +IL        + S   +            G       +  G+     G   +
Sbjct: 1   MRVRRISTILGGTAALAFALSACGTADVGGGSGGEGGGGEGGGDTITIGVKYDQPGLGLL 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +    GFDVD    ++  +  +P +I++    +  R   LQ   +D++      T  R
Sbjct: 61  DGD-APVGFDVDVATYIAGELGYEPEQIEWTEAASANRESFLQQGTVDMVIATYSITDER 119

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
                + F    Y   Q  ++      I     L+G  +C  +G+ +   + D      +
Sbjct: 120 --RQVVDFAGPYYVAQQDILVQADNEDIQGPEDLAGKVLCSASGSRSANNIVDDM---GI 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                      E  +       DA T D + L         P  + ++ +   +      
Sbjct: 175 DAELREAGNYSECLSLLGNGTVDAVTTDNTILAGFAAQ--DPGTYRVVNNPFGEERYGVG 232

Query: 230 IIQGDTEWYNIVSWTHY 246
           +  G TE    V+    
Sbjct: 233 LPAGSTERCEEVNAAIQ 249


>gi|167838712|ref|ZP_02465571.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia thailandensis MSMB43]
          Length = 256

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 84/245 (34%), Gaps = 19/245 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++ L + +L  ++    A     I      + G++     F     +G   GFDVD    
Sbjct: 1   MAALTVALLAVSAGGVQAKDWSTI------RFGVDASYPPFESKGPDGKVVGFDVDLGNE 54

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +    +K  ++  +      AL++++ D +  +   T  RE  +   F    +   
Sbjct: 55  ICKRV---KAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTP 109

Query: 127 QGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              +  K   +  +   L G ++ V+ GT  E     ++    +K  P  ++  +++ A 
Sbjct: 110 TRLVTKKGANLMPTAESLQGKTVGVEQGTIQETYAKVHWAPKGVKVQP--YQNQDQVYAD 167

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNI 240
             A R DA   D        L   R  ++      +             + + DT+    
Sbjct: 168 LIAGRLDAALQDAVQADIGFLKTPRGKDYAFAGTDLDDPKTLGEGAGIGLRKEDTDLKAK 227

Query: 241 VSWTH 245
           +    
Sbjct: 228 IDKAI 232


>gi|325524891|gb|EGD02832.1| lysine/arginine/ornithine ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. TJI49]
          Length = 260

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 89/254 (35%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ S  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKGADGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++  +      AL++++ D +  +   T  R+  +   F  
Sbjct: 53  VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +   L G S+ V+ GT  E     Y+ +     + + ++  
Sbjct: 108 KLFNTPTRLVTKKGAGLMPTAESLKGKSVGVEQGTIQETYAKTYWASKG--VNVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +++ A   + R D    D        L   R +        +             + + D
Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFAFAGKDLDDPKTLGEGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAM 248
           T+    +      M
Sbjct: 226 TDLKAKIDSAIAGM 239


>gi|28868349|ref|NP_790968.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967199|ref|ZP_03395348.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301381065|ref|ZP_07229483.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061560|ref|ZP_07253101.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302130066|ref|ZP_07256056.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28851586|gb|AAO54663.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213928041|gb|EEB61587.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 273

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKNDPEWDAKVREV 249


>gi|282849349|ref|ZP_06258734.1| putative glutamine ABC transporter periplasmic protein [Veillonella
           parvula ATCC 17745]
 gi|282581053|gb|EFB86451.1| putative glutamine ABC transporter periplasmic protein [Veillonella
           parvula ATCC 17745]
          Length = 260

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 14/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K      L  +                 ++ G L+ G  T    F   + +  + GFDV
Sbjct: 4   FKKLTAIALVAVAAMGLLAGCGNDKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++  +     K+++  +       A+QS  ID+++   + T  RE    L F  +
Sbjct: 63  DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 117

Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +      I ++ +L+G ++  Q GT                      +  
Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVEMAQKI-----PGTTVKQIDSN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I    +A   D    D  A+    L      +  ++ +          + +G+     
Sbjct: 173 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADQDLKLVGEPTKAEGTVLGVKKGNKALQE 231

Query: 240 IVSWTHYAMVT 250
            V+     +  
Sbjct: 232 AVNKALKELKE 242


>gi|227327758|ref|ZP_03831782.1| amino acid-binding protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 256

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 16/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K              TS                   G       F    A  + +GFD
Sbjct: 1   MFKKLLFVGALFATALSTSAFAAEPTY---------VVGSGGTYRPFEFENAQKELEGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +   I+ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 52  IDIIKAIAKA---ENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   I S++ L    + V   +T ++ ++D    +        F+   
Sbjct: 107 PYFPAEQSIVVPKGSTIDSIAALKDHKVGVVNSSTADIVVSDVLGKN--STSIKRFDNTP 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+  +     T+     +++      +     A+ +G+ +    
Sbjct: 165 LMLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLRAK 224

Query: 241 VSWTHY 246
           ++    
Sbjct: 225 INSGLK 230


>gi|307730134|ref|YP_003907358.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307584669|gb|ADN58067.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 256

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 15/242 (6%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L  + L   +     S +   K+   ++ G++     F  V  +G  +GFDVD   AL 
Sbjct: 1   MLTAVALALMAT----STMATAKEWTTIRVGVDPTYPPFESVAKDGTVEGFDVDLGNALC 56

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           + +    +K  ++  +       LQS++ D++  +      R   +      +     + 
Sbjct: 57  AKL---KAKCVWVQSSFDGLIPGLQSRKFDVILSSMAANERRRQQIDFT-ARLYRNQTRL 112

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
                   +   S+L+G  + V+ GT  E      + A       + +   ++  +   A
Sbjct: 113 IAKESAHLLPEASKLAGKRVAVEQGTVQETYARQKWAASG--VEVVAYPSYDQAYSDLTA 170

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243
            R DA   D        L       +    D++  + +     A  + + D +  + ++ 
Sbjct: 171 GRVDAVLMDAVQGRLGFLNTPAGKGYAFAGDVVYDAKIMGDGDAAGVRKSDPDLRDALNG 230

Query: 244 TH 245
             
Sbjct: 231 AI 232


>gi|222082284|ref|YP_002541649.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726963|gb|ACM30052.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 290

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 96/238 (40%), Gaps = 9/238 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               +  +  +   + + + S+L  +   G L+  +   L  ++ V A+G   G+D+D  
Sbjct: 31  LLGGLAIVASVSMPASAESGSVLQSVLSNGKLRIAVLGSLPPYSTVGADGVPVGYDIDIA 90

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L++A+  +P    ++  +   R  +LQ+ ++D+   +    + R  S  +AF      
Sbjct: 91  KKLAAALKVEPE---FVVTDIPSRVTSLQTGKVDVTIADFTRNVER--STSVAFSNPYVV 145

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                ++ +     ++ + + A I V    +   T      AH      + F    +  +
Sbjct: 146 TNMRLLVPESAPYKTIDEANAAKIRVAI--SRGGTAERAVPAHLPNAQIVRFNTQADELS 203

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           A  + + DA   D    Y  K   D   +   +   ++++ +A  +  GD +W  +++
Sbjct: 204 ALLSGQVDAMAEDD--FYNRKAIGDNQGKLRQVDGSLARAEIAIGVPAGDADWLRVIN 259


>gi|331018097|gb|EGH98153.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 273

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAENKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKNDPEWDAKVREV 249


>gi|237729706|ref|ZP_04560187.1| extracellular solute-binding protein [Citrobacter sp. 30_2]
 gi|226908312|gb|EEH94230.1| extracellular solute-binding protein [Citrobacter sp. 30_2]
          Length = 306

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 92/253 (36%), Gaps = 8/253 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            +   +  + I        NA+ L  I+    L  G    L  F+    NG   G+ +  
Sbjct: 26  QWLFLLAGIGITPALMAQQNAATLDHIQSSSVLNVGYRQ-LPPFSFTDHNGKVTGYTIAV 84

Query: 64  CRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C  ++      +  +   + Y+P+N  ERF AL S++ID+       T   E +  ++F 
Sbjct: 85  CNMIADKLRQYLKLNNLTVHYIPVNFAERFSALNSRKIDMDCGV--NTNAPERTASVSFS 142

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y      I  +K  I S+S L G ++ +   +   L      +  ++    I    +
Sbjct: 143 ENYYTAKMRIISLRKNNIRSISDLKGRTVSLTGSSKDLLEFNKANREQHLNISTITSTTI 202

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWY 238
           +        +   A+  D    + L   +++P    +  + I +    A  + + D ++ 
Sbjct: 203 KGAFEKMAHNESAAFFIDDILAWPLINHSEQPELFSVSSESIGNDMHYAIMMRKNDQQFV 262

Query: 239 NIVSWTHYAMVTA 251
             V  T      +
Sbjct: 263 TFVDSTLKDFFAS 275


>gi|158423460|ref|YP_001524752.1| polar amino acid ABC transporter periplasmic substrate-binding
           protein [Azorhizobium caulinodans ORS 571]
 gi|158330349|dbj|BAF87834.1| polar amino acid uptake family ABC transporter periplasmic
           substrate- binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 347

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 83/235 (35%), Gaps = 8/235 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + +A +L  IK++G L  G+      F     +G   G + D    ++  +      
Sbjct: 94  GTVAASADVLDKIKEKGVLTVGVKADYKPFGFRDPSGAIVGIEPDLAADVAKRLGVKLEL 153

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +  +   +  R   LQ  +ID++         R   +     P         +  K K +
Sbjct: 154 VPVV---SANRIEFLQQGKIDLMIATMSDKPERRKVVLAIDPPYYSDAVNILLSKKVKNV 210

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +    L G  +C  +G      ++  + A         F+  E+   A +   C  Y  D
Sbjct: 211 TKWEDLKGKVLCGTSGAWYNKDVSTKYGA-----EVKAFDGSEKPLFALKGGECIGYLYD 265

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            + +    L  +  +++ +    + ++P   A+  G+ ++   ++ T    +   
Sbjct: 266 QTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAPGEDKFAKFMTDTTLDWMKTG 320


>gi|118590275|ref|ZP_01547678.1| putative amino-acid binding periplasmic protein [Stappia aggregata
           IAM 12614]
 gi|118437247|gb|EAV43885.1| putative amino-acid binding periplasmic protein [Stappia aggregata
           IAM 12614]
          Length = 253

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 15/234 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            + K    ++ G       F  + A+G   GFDVD  +AL   +  +    +++  +   
Sbjct: 15  AEAKDWSKVRIGTEGAYPPFNSLTADGQLVGFDVDIAKALCEEMKVE---CEFVTQDWDG 71

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSG 145
              ALQ+ + D +  +   T  R+    + F    Y       + K   +   S   L G
Sbjct: 72  MIPALQAGKFDAVIASMSITDERKE--KVDFTNKYYNTPPAIAVPKDSTLKGTSDEDLKG 129

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++  Q+ TT      +   +        ++   +E      + R DA   D+  L    
Sbjct: 130 VTLGAQSSTTHSNYAEEKLPSA----DLKLYPTPDEYKLDVASGRVDAVIDDVVVLSDWL 185

Query: 206 LTNDRPSEH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            T+D         +    +I+      AI + D E   + +     ++   +  
Sbjct: 186 ATDDGACCKLLGTLTPDPVINGEGAGIAIRKDDGELKEMFNKAIEGILANGKYK 239


>gi|220903863|ref|YP_002479175.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868162|gb|ACL48497.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 247

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 79/254 (31%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++    +++  ++ +              +    +        + AN   +G+ 
Sbjct: 1   MLRRMTLAFAGFVLMCSSAMAAE-----------KIVVASDCTWPPMEMLDANKKPEGYS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D+ RA+  A   D        +     F  + + Q D+++ +   T  R+      F  
Sbjct: 50  SDYLRAVGKAAGLDMD---IRNVAWDGIFGGVATGQYDVVASSVTITPERQK--QFDFTE 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  ++ + + + S++ L G  +  Q GTT         +  ++      ++ V 
Sbjct: 105 PYYEVVQAVVLPEGQSVKSLADLKGKKVGGQIGTTGIFV----TRKADVGADIKEYDDVG 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    R DA   D                +  +      K      + +G  +  +
Sbjct: 161 LAIQDLVNGRIDAVVCDDPVAMYYVNKKADTAGKLNLSYKTDEKEYYGFTVRKGRKDLLD 220

Query: 240 IVSWTHYAMVTAEE 253
            ++     +  + E
Sbjct: 221 KLNKGIREVKASGE 234


>gi|186473374|ref|YP_001860716.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184195706|gb|ACC73670.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 289

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 14/256 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                L L   F      +A+   +IK RG+L          F  V A+G   G+D D  
Sbjct: 22  LRTCALALAATFGIVHVAHAASAEEIKARGYLSVATEDDYNPFEFV-ADGKNTGYDNDLL 80

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             +   I  D   ++   +        + + + D+       T  R+ +    F   T  
Sbjct: 81  ALVRKKIGVD---VKQQIMPWSGILPGVTTGKYDMALTAVLVTEERKKT--FDFASPTCE 135

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAH---NMKYHPIVFER 178
               +   K   I +   L G  +  + G+     L    +  K     N     I ++ 
Sbjct: 136 AVTFYATKKGSPIKTPDDLVGKVVGAETGSAMLADLKLFDEQLKKKHGGNGIKQIIEYQS 195

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E        R DA      +L +L     RP    +   I   + +A A+ +G+T+  
Sbjct: 196 YPEAYQDLGVGRVDAVANTQISLNSL--VKTRPDVFAVGQAIGKPTYIAWAVKKGNTDVL 253

Query: 239 NIVSWTHYAMVTAEEL 254
            +V      +  + E+
Sbjct: 254 KMVDAALLELRKSGEM 269


>gi|260167421|ref|ZP_05754232.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|261756833|ref|ZP_06000542.1| extracellular solute-binding protein [Brucella sp. F5/99]
 gi|261736817|gb|EEY24813.1| extracellular solute-binding protein [Brucella sp. F5/99]
          Length = 220

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 18/200 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +I    + +         ++   ++         F  V ++G  +G D
Sbjct: 1   MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL  A+    +K   +  +       L+S + D +  +   T  R+  +   F  
Sbjct: 52  VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y       + K   I+S       G ++  Q  TT      D +          ++  
Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164

Query: 179 VEEIDAAYRAHRCDAYTGDI 198
            +E +A  ++ R DA   D 
Sbjct: 165 ADEANADLKSGRLDAVVSDK 184


>gi|154484327|ref|ZP_02026775.1| hypothetical protein EUBVEN_02040 [Eubacterium ventriosum ATCC
           27560]
 gi|149734804|gb|EDM50721.1| hypothetical protein EUBVEN_02040 [Eubacterium ventriosum ATCC
           27560]
          Length = 285

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 86/271 (31%), Gaps = 33/271 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-----------------------GFLK 37
           M K   V +  ++ +   +   ++    + K                         G L 
Sbjct: 1   MKKFLAVVMTAVLAMSMMTACGSSKSSEENKDTTAAKAETTKAETIDASGVTLVSDGVLT 60

Query: 38  CGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G   G   F  ++ +G   +GFD+D    ++  +     K+ ++  +       +  K 
Sbjct: 61  VGAEMGYAPFETLQKDGKTPEGFDIDIITEIAKRLG---LKVNFINTSFDGILGKI-GKD 116

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGT 154
            D++         R+    + F      + Q  ++ K     I+S+  L G S+ VQ GT
Sbjct: 117 YDVVCSAVTINPTRKK--AVLFSTPYITNYQTVVVKKGSDLKINSLKDLDGKSVGVQKGT 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T++  +++Y     +       +++            DA   D +        N    E 
Sbjct: 175 TSDQLMSEYKSTKTINVEVAANDKLLNCFTQLTNGEIDAVVVDSTVADGFVAKNPDKYEK 234

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   +     AI + + +    ++   
Sbjct: 235 AFSDKTEPEE-FGIAIGKNNAKLQEAINKAL 264


>gi|116254865|ref|YP_770701.1| putative ABC transporter component [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115259513|emb|CAK10651.1| putative ABC transporter component [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 278

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 13/238 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKI 78
               A  L +I     L+C     +  FA       +  GFDVD C A++  +       
Sbjct: 19  LPAQADQLDNIMSAKTLRCATFADVPPFASPDLKTREMAGFDVDLCGAIAKELGVKAE-- 76

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
              P++ + R   ++  ++DI   N  +TL R   +   F    Y   +  I+       
Sbjct: 77  -IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADDAGK 133

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             +  +G  I    G+T+E+++         K  P+ F+       A +  +      + 
Sbjct: 134 KKADYAGQRIASTKGSTSEMSI------KLNKSDPLTFQDTASAYLAVQQGKARGMVANT 187

Query: 199 SALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                    +  +     ++ + +   P+   + +        ++     + T+ E+ 
Sbjct: 188 MTTTKFVNESKSKGKAMRMIEEPMLYQPIGIGMAKDQPALTAKINEILRKLDTSGEIN 245


>gi|89902914|ref|YP_525385.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89347651|gb|ABD71854.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 247

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 24/245 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F +S   +  L     +              L+ G +        V  N    GFD+
Sbjct: 4   RRTFLLSCFAVASLGAAHSNAQ----------DVLRVGTDATFPPMEFV-ENDKRTGFDI 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+  A+     +I+++ ++ K     L SK+ D+       T  R+    + F   
Sbjct: 53  DLVEAMGKAMNK---RIEWVDIDFKGLIPGLVSKRFDMSVSAIYITDERKKV--VDFTDS 107

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G   ++      I ++  L+G  + VQ GT +   L      +  +   +  E+ +
Sbjct: 108 YYAGGLVAMVKDGNTGIKTLKDLNGKKVAVQVGTKSVGYL----GTNYPQVQLVEVEKNQ 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+       R DA         A +    R   H +L   ++      A+ +   +    
Sbjct: 164 EMFNLVDIGRADAAVTGKP--AAFQYVRTRGGLH-VLEQQLTTEEYGMALRKDTPDLTRA 220

Query: 241 VSWTH 245
           V+   
Sbjct: 221 VNAAL 225


>gi|30018610|ref|NP_830241.1| cystine-binding protein [Bacillus cereus ATCC 14579]
 gi|229042256|ref|ZP_04190008.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH676]
 gi|229108025|ref|ZP_04237651.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock1-15]
 gi|229125852|ref|ZP_04254877.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BDRD-Cer4]
 gi|229143145|ref|ZP_04271577.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BDRD-ST24]
 gi|296501182|ref|YP_003662882.1| cystine-binding protein [Bacillus thuringiensis BMB171]
 gi|29894151|gb|AAP07442.1| Cystine-binding protein [Bacillus cereus ATCC 14579]
 gi|228640226|gb|EEK96624.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BDRD-ST24]
 gi|228657510|gb|EEL13323.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           BDRD-Cer4]
 gi|228675425|gb|EEL30643.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           Rock1-15]
 gi|228727047|gb|EEL78252.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus
           AH676]
 gi|296322234|gb|ADH05162.1| cystine-binding protein [Bacillus thuringiensis BMB171]
          Length = 264

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +     V+ + L   F     +  S           +  ++     F   + +G   G
Sbjct: 1   MKRKLLTIVASITLCTSFILGACSKESSTTSSNSEKEFRYAMSGLYKPFNYKENDGKLVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   AL+  +    + +       +     LQ+K+ D++  +   T  R     ++F
Sbjct: 61  FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115

Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y  G   F+  K   ISS   L G  I V   +T +  +A              ++
Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D   +  L++  +  S+       ++   +  AI + D E 
Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSKIKEAGKPLNLDEMGIAIRKDDKEM 227

Query: 238 YNIVSWTHYAMV 249
              V+     ++
Sbjct: 228 VEKVNKALDEII 239


>gi|330892335|gb|EGH24996.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 254

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL +K+ D L  +   T  R+    + F   
Sbjct: 52  EIGQALCARMKVECEAVT---SDWDGIIPALMAKKFDFLISSLSITEERK--QVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K   I       +   L+G S+  Q  T     L D            +
Sbjct: 107 YYSNKLQFIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSKAGQNFEFKGEPVVEDDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNAALKEIIA 237


>gi|253735261|ref|ZP_04869426.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253726668|gb|EES95397.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 485

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 23/282 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                   R+ ++  A ++ + +    +     A    N +     +  +   K  +  A
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNGEEKDTV-IA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
           + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|222082602|ref|YP_002541967.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727281|gb|ACM30370.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 280

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 79/222 (35%), Gaps = 13/222 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVD 62
             F + L +  LF T    +A  L  IK RG L  G+      F  +   G + KG+++D
Sbjct: 10  TLFAAALSIGALFSTIAHADA-TLDRIKGRGSLTVGVILSGAPFGYIDPAGQEQKGYNID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL+  +      +    +    R   LQ  ++DIL  N  +T  R   L        
Sbjct: 69  IAKALADKLGVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEERAKILDYV-PTAY 124

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              G   +  K  G+   S L G ++CV  G+     L + + A              E 
Sbjct: 125 DRSGGAAVGRKDSGLKDWSDLKGKAVCVSQGSNYTQPLIEQYGA-----EVKALPSQPES 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
             A +   C A    + A   L L  DRP E      +    
Sbjct: 180 LLALQGGNCVAAV-HVGATVGLLLQ-DRPEEWKDYTILFPTE 219


>gi|319407360|emb|CBI81007.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella sp. 1-1C]
          Length = 250

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 80/236 (33%), Gaps = 9/236 (3%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L   +F  +A++                    F+ + +N    GFD+D   AL   +   
Sbjct: 3   LLAAAFIISATLFSQFVNAKTFTIATEGSYPPFSYIDSNNKLHGFDIDIAHALCKKM--- 59

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
                    +     L L +K+ D +  +   T  R     + F    Y      I+ K 
Sbjct: 60  KIACVITIQDFDGIILGLLAKKYDAIIASLSPTQER--LKKIDFTDAYYSTESAAIVPKD 117

Query: 135 KGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
             I   SV    G ++ VQ  TT  +   +++ +     +   +   +E+     ++R D
Sbjct: 118 SQIKEISVEAFKGKNLGVQLNTTQAIYAENHYSSKG--VNIKFYPTTKEVIRDLLSNRLD 175

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               D   +        +   H +     ++ P+A AI Q + +  N  +    A+
Sbjct: 176 IVILDKLQILDWFKNQGKDCCHFLGSIEGTELPVAIAIRQNNDDLKNQFNKAIKAI 231


>gi|298249930|ref|ZP_06973734.1| extracellular solute-binding protein family 3 [Ktedonobacter
           racemifer DSM 44963]
 gi|297547934|gb|EFH81801.1| extracellular solute-binding protein family 3 [Ktedonobacter
           racemifer DSM 44963]
          Length = 300

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 91/269 (33%), Gaps = 30/269 (11%)

Query: 3   KDFFVSILCLIILFF--TSFSTNASI-----LGDI----------KKRGFLKCGINTGLV 45
           K F + ++C+++L    ++   N+S      L  +          +  G L  G +    
Sbjct: 18  KKFIIVLMCMLLLTLIISACGGNSSTTSNEQLAKVTPNVPAPKDLQTAGTLTIGTDPTYF 77

Query: 46  GFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
               V   +  + GFD+D  +AL++ +      +  +  +    F  L +K+ DI+  + 
Sbjct: 78  PMEYVDQTSNQYTGFDIDLSQALAAHMGVK---VNVVKTSFDTIFDDLNNKRFDIIVSSV 134

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTL--- 160
             +  R       F           + +   K +  V  L G ++ VQ GT+ +  L   
Sbjct: 135 YMSPKR--LPKFDFVEYMQAGSALLVQNGNPKNVKGVDDLCGLNVSVQNGTSQQEKLTTT 192

Query: 161 -ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                         +V     ++  A    R DA     S           P +      
Sbjct: 193 SKACEAKGKSAIKVMVLGTETDVIQALVDRRVDATFQG-SLSAGYYNRL-HPEQFAYGGP 250

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +I  +P    I +GD E  N V     A+
Sbjct: 251 VIEAAPSGIVIRKGDAEMQNAVQKAFQAL 279


>gi|254805377|ref|YP_003083598.1| histidine transport system substrate-binding protein [Neisseria
           meningitidis alpha14]
 gi|254668919|emb|CBA07124.1| histidine transport system substrate-binding protein [Neisseria
           meningitidis alpha14]
 gi|254670060|emb|CBA04906.1| glutamine transport system substrate-binding protein [Neisseria
           meningitidis alpha153]
 gi|254673285|emb|CBA08377.1| glutamine transport system substrate-binding protein [Neisseria
           meningitidis alpha275]
 gi|261392151|emb|CAX49659.1| putative amino acid-binding lipoprotein (HBP) [Neisseria
           meningitidis 8013]
 gi|325142784|gb|EGC65156.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis 961-5945]
 gi|325198722|gb|ADY94178.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis G2136]
          Length = 268

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252


>gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 722

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++++   +F +  S   + KK      G +     F    + G + G D
Sbjct: 1   MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFTPFEFQDSKGKYIGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++     +   +   PL       A+QSKQID +      T  R+      F  
Sbjct: 58  VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I S   L G ++  + GT +   L          Y    F+  
Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +  A      DA   D      L        +  ++ D  + S    A+ +G  
Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 18  TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           T+       +  I  K+       ++    F    A GD+ G DVD  +  ++ +     
Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            +++  +       A++S Q D +      T  R+      F    +  G    + K   
Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G  + V+ GT +   L          Y     +  + + +A      DA  
Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D   +    +  ++P    I  +         A+ +  + E   + +     M    E 
Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486

Query: 255 G 255
            
Sbjct: 487 D 487


>gi|270262710|ref|ZP_06190981.1| hypothetical protein SOD_c03320 [Serratia odorifera 4Rx13]
 gi|270043394|gb|EFA16487.1| hypothetical protein SOD_c03320 [Serratia odorifera 4Rx13]
          Length = 262

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 86/256 (33%), Gaps = 21/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++  + L F++F    S          +K G++            G   GF 
Sbjct: 1   MKTTMSLVLVLPLALSFSAFGGEFSG-------KVIKLGVDPTYPPLEYKTPQGTLTGFG 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+   +    +K  ++  +       L +K+ D ++ +   T  R   + +AF  
Sbjct: 54  VDIAQAMCDQM---QAKCVWVESSWDGMIPGLLAKKFDAIASSMTITPQR--QMQIAFSN 108

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    +  K   +  + + L G S+ VQ G++ E      ++      + + ++  
Sbjct: 109 KVSNAPARLVARKGSDLQPTAASLKGKSVGVQQGSSQEAYATALWRTAG--VNVVSYQSQ 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E +      R DA +   S             +   +   ++ S          + + D
Sbjct: 167 QEANEDLINGRLDA-SLLASVSAGEFFHTPAGKDFAFVGAELNDSKYFGIGDGIGLRKED 225

Query: 235 TEWYNIVSWTHYAMVT 250
           T   +  +     ++ 
Sbjct: 226 TALRDAFNSALQTIIA 241


>gi|222151672|ref|YP_002560828.1| ABC-type amino acid transport system substrate binding component
           [Macrococcus caseolyticus JCSC5402]
 gi|222120797|dbj|BAH18132.1| ABC-type amino acid transport system substrate binding component
           [Macrococcus caseolyticus JCSC5402]
          Length = 255

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 65/237 (27%), Gaps = 17/237 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +  L+ +     S         K    L  G       F      G   G+D
Sbjct: 1   MKK-LFAVLTALLFVLAACGSNEEDTK---KDSKTLTVGTEGTYAPFTFHDKEGKLTGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++         ++++       F  L S + D ++        R       F  
Sbjct: 57  VEVTEAVAKKAGYK---VKFVETQWDSMFSGLNSGRFDTVANQVGINEER--KDKYNFSK 111

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     ++ K    I S   + G  +  Q  T+    LA    A          E  
Sbjct: 112 PYTYSEGVLVVRKNNDSIQSFDDVKGKKLA-QTLTSNYGKLAKDKGA-----EITSVEGF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +      ++R +    D            + ++  ++     KS       +   +
Sbjct: 166 NQAIEMVLSNRVEGTFNDK-LSVLDYQKQKKAADIKLITGDAEKSQSGFVFTKKTDK 221


>gi|239618042|ref|YP_002941364.1| extracellular solute-binding protein family 3 [Kosmotoga olearia
           TBF 19.5.1]
 gi|239506873|gb|ACR80360.1| extracellular solute-binding protein family 3 [Kosmotoga olearia
           TBF 19.5.1]
          Length = 259

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 92/237 (38%), Gaps = 16/237 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            S++ +IK+RG L+ G + G +        G+  G +VD  + +++ +     +++++ +
Sbjct: 22  GSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVDVLKIMATLLG---VRLEFVVV 78

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVS 141
           N      AL S++ DI+      T  R     + F       GQ  +    K   + S+ 
Sbjct: 79  NWDGIIPALLSEKFDIIWSGMTITDERAK--KVDFSEPYLKIGQVLVYNNRKISSVPSLE 136

Query: 142 QLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +L+     I VQ GTT +      F         + F+ ++E      + R D +T   S
Sbjct: 137 ELNNPSVRIAVQLGTTGDEAARRLFPRAK----ILTFDSMDEAAFQVASGRAD-FTVVDS 191

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
                           +    ++   L  AI + D E  N ++     + ++  + +
Sbjct: 192 IYAQYVAKKYD--RLSVADGFLTSEELGVAIRKNDPETLNWINNFIEGLKSSGFMEL 246


>gi|322392131|ref|ZP_08065593.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus peroris ATCC 700780]
 gi|321145031|gb|EFX40430.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus peroris ATCC 700780]
          Length = 280

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 8/223 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
                 K++  +  G +   V     + NG + GFD+D  +A+S  +     K+ + P++
Sbjct: 31  DNWNKYKQQYSITIGFDNTFVPMGFEEKNGQYVGFDIDLAQAVSEKLG---IKVHFQPID 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              +   LQ+  ID +      T  R     +AF      + Q  +  K + I SVS + 
Sbjct: 88  WDMKETELQNGTIDAIWNGYSATDER--REKVAFTIPYMQNQQVIVSKKSQNIQSVSDMK 145

Query: 145 GASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
              +  QAG++  L      +  K          ++   E     +  R DA   D    
Sbjct: 146 DKVLGAQAGSSGYLDFEGQPELLKNIVKDQKANQYQSFNEALIDLQNDRIDALLIDRVYA 205

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                T     ++ I P        A  +   D      ++  
Sbjct: 206 NYYLQTEGILEQYEIFPAGFESESFAVGVRPADQTLLANLNKA 248


>gi|317053175|ref|YP_004119529.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316953502|gb|ADU72973.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 272

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 82/245 (33%), Gaps = 13/245 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            V   C+      + + NA  L +I K   L  G+N  L             GFD    +
Sbjct: 10  LVIASCIASALLGAATANARSLDEIMKSKTLIVGVNPNLPPLGVYDDKNQISGFDATVAK 69

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++ ++      ++ + + + +R   + S +ID +          +    + F      +
Sbjct: 70  KIADSMGVK---LELVAVGSNDRVPFIMSDKIDAVMGGMTRND--DRMKVVDFTDPVNTE 124

Query: 126 GQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G +   KK       L+     +    GTT    + D           ++ +   +  
Sbjct: 125 VLGILTTDKKPYKKWQDLNDPAVKLVQVRGTTPIKYIQDNIPKA----QLLILDNYPDAV 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A    R DA    +  +  L  T   P++  ++ D I       A+ +G+T     ++ 
Sbjct: 181 RAIAQGRADALIDVLDFM--LDYTKKYPTKWHVVDDPIEVDYDCIAVSKGNTALREKLNT 238

Query: 244 THYAM 248
              A+
Sbjct: 239 EIAAL 243


>gi|148976100|ref|ZP_01812843.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrionales bacterium SWAT-3]
 gi|145964495|gb|EDK29749.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrionales bacterium SWAT-3]
          Length = 243

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 81/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L      +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLASFNAAAQE-------------EIKFAMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCEEM---KATCTFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LQQVNFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI   +  ++  + L G  I VQ G+T +  L +           + +   +
Sbjct: 103 AYYDNSAAFISI-EGKVADQAALEGKRIGVQNGSTHQSYLLEQLP----GVTAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +       D       + + ++           A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDN---LTYVGEQVTNQEYFGNGFGIAVNKSNP 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    ++    A+    E  
Sbjct: 215 ELVAQLNTALAAVKANGEYD 234


>gi|153831543|ref|ZP_01984210.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01]
 gi|148872053|gb|EDL70870.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01]
          Length = 254

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 91/248 (36%), Gaps = 10/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L   +    S    A  L DI+K G L+ G       F+      ++ G+D
Sbjct: 1   MNK---TTLLLASVALTLSGVAQADKLEDIQKSGTLRVGTTGDYKPFSYYDGK-NYSGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + +++ +  +   ++ +  + K     L   + DI        + R+++       
Sbjct: 57  IDVAKHVAAELGVE---LEIVRTSWKALLTDLNQDKYDIAMGGITRKMQRQLNAEQTQGY 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +T+         K +  +++ +++  S+ V            +  A+  K     FE   
Sbjct: 114 MTFGKCFLVAKGKAEQYNTLDKVNQPSVRVGVNIGGTN--EAFADANLQKASFTRFENNL 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A    + D    +       ++T++R  E     D  +K      I +G+    N 
Sbjct: 172 DVPKAVATGKVDVMVTETPEGLFYQVTDER-LEAARCEDPFTKGQFGYLIPKGEQRLLNT 230

Query: 241 VSWTHYAM 248
           V++    M
Sbjct: 231 VNFIMDEM 238


>gi|304386971|ref|ZP_07369229.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria meningitidis ATCC 13091]
 gi|304338928|gb|EFM05024.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria meningitidis ATCC 13091]
          Length = 268

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252


>gi|296113904|ref|YP_003627842.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis RH4]
 gi|295921598|gb|ADG61949.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis RH4]
 gi|326560581|gb|EGE10962.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 103P14B1]
 gi|326562225|gb|EGE12553.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 7169]
 gi|326565593|gb|EGE15756.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 12P80B1]
 gi|326567179|gb|EGE17301.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC1]
 gi|326568461|gb|EGE18541.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC7]
 gi|326572015|gb|EGE22017.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC8]
 gi|326573962|gb|EGE23912.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis O35E]
 gi|326574953|gb|EGE24883.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 101P30B1]
 gi|326576283|gb|EGE26198.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis CO72]
          Length = 265

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M    F  ++  I+  F+  + +       K  G  L+         F     +G   GF
Sbjct: 1   MKFKTF-GLMAAIVGTFSISACSGQNEQSTKASGDTLRIATEGTYAPFNYTNPDGSLGGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   AL + +    ++ Q +  +      AL++ + D +      T  R  S  + F 
Sbjct: 60  DVDIANALCNKM---QTECQIIAQDWDGIIPALKTGKFDAIVAAMSVTPER--SEQVDFS 114

Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              + +   F+  K       S   ++ A I  Q  T +   L   +        P +++
Sbjct: 115 EPYFVNSLVFLAKKGSNFDPSSTDAINNAKIVAQRSTISSQWLTQTYP----NSKPQLYD 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            ++         R DA   D         ++   +  +   DI     ++ A+ +G+T  
Sbjct: 171 TLDNAFIDLGNERADAMISDKLPALTWLSSDLGQNFEIKGGDININDKVSIAVDKGNTAL 230

Query: 238 YNIVSWTHYAM 248
               +    A+
Sbjct: 231 LQKFNEALAAI 241


>gi|207724232|ref|YP_002254629.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           MolK2]
 gi|206589448|emb|CAQ36409.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           MolK2]
          Length = 254

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 13/218 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +I++ G L          F     +    GF+++  +A+   +      I++  L+   
Sbjct: 26  EEIQQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               LQ  + D++  +   T  R     + F    Y  G   +      I + + L+G  
Sbjct: 82  LLAGLQQNRWDLVISSHGVTEERAK--AVDFTTPHYCSGSSIVAR-DPAIRTAADLTGKV 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ G+T    +    K          F +  +   A  + R DA+  D     AL   
Sbjct: 139 VAVQTGSTYLENVHKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FVALAAI 192

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P  ++ L   +    +A A+ +G+T      +   
Sbjct: 193 QSNPEANLKLGSPLFVERIAAAVAKGNTALATRYNKAL 230


>gi|254471178|ref|ZP_05084580.1| cystine ABC transporter, cystine-binding protein [Pseudovibrio sp.
           JE062]
 gi|211959324|gb|EEA94522.1| cystine ABC transporter, cystine-binding protein [Pseudovibrio sp.
           JE062]
          Length = 280

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 90/267 (33%), Gaps = 21/267 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             SI+ L +L  +    +  ++  + +   ++   N+G    + + A+G ++G+D+D  +
Sbjct: 10  IGSIVGLSLLAVSQPVFSGEVMDRVMETKVIRVATNSGYPPASYLNADGVFEGYDIDVSK 69

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +        +L    +         + ++   +   T  R     L F  + Y+ 
Sbjct: 70  EVAKRMGAKAE---FLNPAWEAITSGKWGGRWEMSIGSMTPTPARAKV--LDFPAVYYYT 124

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY----------FKAHNMKYHPIV 175
              F +HK     ++ +L+G  I    G+T E  L             F+          
Sbjct: 125 PAAFYVHKDSSYETLIELNGKRIGASTGSTFEYYLQHELELDPVYSPAFEFAVTPGEVRT 184

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +E    +    R          I+++  +           IL + +   PLA    + D 
Sbjct: 185 YEADSNVLDDLRLGDGKRLDAGITSVPTILEAIKASYPIRILGEAVFFEPLAVVTSRDDP 244

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN 262
           E+   V          EE+      + 
Sbjct: 245 EFSKKVGEII------EEMRADGTLVE 265


>gi|156976754|ref|YP_001447660.1| ABC amino acid transporter periplasmic ligand binding protein
           [Vibrio harveyi ATCC BAA-1116]
 gi|156528348|gb|ABU73433.1| hypothetical protein VIBHAR_05529 [Vibrio harveyi ATCC BAA-1116]
          Length = 247

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 85/258 (32%), Gaps = 21/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L      + +              +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    ++  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCKEM---EAQCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K+  ++    L G  + VQ G+T +  L +           + +   +
Sbjct: 107 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       +  +     +       +    A+ +G+ E  
Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221

Query: 239 NIVSWTHYAMVTAEELGI 256
           N ++     +    E  +
Sbjct: 222 NKLNTALKTVKANGEYDV 239


>gi|78059833|ref|YP_366408.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77964383|gb|ABB05764.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 274

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 78/253 (30%), Gaps = 15/253 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              +      L   +   +A  L  I K G ++ G+      F  +  +    G+D+D  
Sbjct: 20  LLCACAGTAGLAAFAPLAHADALDTIAKSGVVRIGVFEDYPPFGSIGPDMKPLGYDIDMA 79

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             +  A+    +K++ + +    R   L  ++ D+L          E +  + F      
Sbjct: 80  NLIGKAL---NAKVELVQVTGDNRMAYLADRKTDML---LSVGQTPERAKVIDFSNAYAP 133

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   +   + L+G S+ V  GT  +L+++              F+      A
Sbjct: 134 YYLAVFGPKSLAVKGNADLAGKSVAVARGTLEDLSVSKVAP---PSATIKRFDDPNGAIA 190

Query: 185 AYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           A+ + +             +   +    P +   L      SP    + + +      V+
Sbjct: 191 AFLSGQAQLLVVGNDVGATIIARHPSIDPEQKFSL----FSSPDHVGLNKNEPRLMQKVN 246

Query: 243 WTHYAMVTAEELG 255
                   +  L 
Sbjct: 247 DAIAGARKSGTLN 259


>gi|57237036|ref|YP_178838.1| CjaC [Campylobacter jejuni RM1221]
 gi|86151588|ref|ZP_01069802.1| cjaC protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|157415021|ref|YP_001482277.1| CjaC [Campylobacter jejuni subsp. jejuni 81116]
 gi|57165840|gb|AAW34619.1| CjaC [Campylobacter jejuni RM1221]
 gi|85841217|gb|EAQ58465.1| cjaC protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|157385985|gb|ABV52300.1| CjaC [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747659|gb|ADN90929.1| Histidine-binding protein [Campylobacter jejuni subsp. jejuni M1]
 gi|315058196|gb|ADT72525.1| Histidine-binding protein precursor [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315931938|gb|EFV10893.1| CjaC protein [Campylobacter jejuni subsp. jejuni 327]
          Length = 251

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 76/237 (32%), Gaps = 16/237 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++++ L+ LF  + S + +   +      LK G       F     N    GFD
Sbjct: 1   MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++     T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + + L G  I VQ GT     L +              + +
Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                A + ++ DA   D           + P       +       + A  +   +
Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 222


>gi|319899028|ref|YP_004159121.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           clarridgeiae 73]
 gi|319402992|emb|CBI76547.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           clarridgeiae 73]
          Length = 250

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++I  +I     +   NA           LK         F+ + +N    GFD
Sbjct: 1   MK---LLAIALIISATLFAQLVNAKT---------LKIATEGSYPPFSYIDSNNKLHGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +         +     L L +++ D +  +   T  R     + F  
Sbjct: 49  IDITYALCKKMKVE---CVITLQDFDGIILGLLAQKYDAIIASLSPTQER--LKKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+ K   I   SV    G ++ VQ+ TT  +   +++ +     +  ++  
Sbjct: 104 AYYNTELAAIVPKDSKIKEISVEAFKGKNLGVQSNTTQAIYAENHYASKG--VNIKLYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E+     + R D    D   +        +     +     ++ P+A AI + +    
Sbjct: 162 SKEVTRDLLSKRLDIVILDKLQILDWFKNKGKGCCRFLGSIEGTQLPIAIAIRKNNDILK 221

Query: 239 NIVSWTHYAM 248
           N  +    A+
Sbjct: 222 NQFNEAIKAI 231


>gi|296158456|ref|ZP_06841287.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295891400|gb|EFG71187.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 260

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 68/251 (27%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L      S +  A  L  IK  G  + G       F     +G   GFD
Sbjct: 1   MKSIRSILLIALFQAVAVSSAFAADELAQIKSAGVFRIGTEGTYAPFTYHDESGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P   Q++          L   + D +      T  R++     F  
Sbjct: 61  VEIGTAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAITDARKV--KYDFSD 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +      I +   L G        +      A            I  +  
Sbjct: 116 PYITSHAALIVQSNNTTIKNFDDLKGKKSANTLTSNFGKIAAA------HGAEVIPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEW 237
            E      + R DA   D  +    K         +   D    S    A  I +G+ E 
Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSTDSSDKSAVLIRKGNPEL 229

Query: 238 YNIVSWTHYAM 248
              ++     +
Sbjct: 230 QAAINKALAGI 240


>gi|325205656|gb|ADZ01109.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis M04-240196]
          Length = 268

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVAANAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252


>gi|118475359|ref|YP_892389.1| arginine-binding periplasmic protein 1 [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414585|gb|ABK83005.1| arginine-binding periplasmic protein 1 [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 242

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 88/258 (34%), Gaps = 29/258 (11%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K FF  I+   I    S + +            ++ G N     F  +       GFD+D
Sbjct: 2   KCFFKFIVVACIAAGFSHAAD-----------VIRVGTNATYPPFEFIDEQNKIAGFDMD 50

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              ALS  +  +    + + ++      AL++ +ID ++     T   +    ++F    
Sbjct: 51  LIDALSKKVGFEY---KIVNMSFDALIPALKAGKIDAVAAAMSATP--DRIKAVSFTKPY 105

Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y     FI   K   ++S   L G  I VQ GT  E+               +  E +  
Sbjct: 106 YNTENLFIKQAKNGDLTSKQNLDGKKIAVQLGTVQEIAARAM-----KGVKVMANEDIFA 160

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +  + DA   D S  Y     N   +E   L +         +I     +  ++V
Sbjct: 161 AIMALKNGKVDAVLVDSSIGYGYLNKNKDLAEF--LKEPDGSE--GFSIAFDKNKHTDLV 216

Query: 242 SWTHYAMVTAEELGITQK 259
           +  + A+   EEL     
Sbjct: 217 AKINQAV---EELKSDGT 231


>gi|313123999|ref|YP_004034258.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312280562|gb|ADQ61281.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 500

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 26/264 (9%)

Query: 1   MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K      ++L L  LF  +             + +++  IKK G L  G++       
Sbjct: 1   MKKLIKIMTALLLLAGLFTAAIPAVDAASSKKMASGTVMKKIKKSGKLVVGMSADYPPLE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
               V     + G DV+  + ++  +      ++   ++     +AL++ +ID++     
Sbjct: 61  FTKNVNGRNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117

Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R+    + F  I Y    D        K   +S +   G ++  Q G+    +L  
Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                 +K   +       +  A ++ + DA             TND     V      +
Sbjct: 176 NAAESGIKVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYATNDTSLSLVKSSLSQA 232

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246
           +   A  + +G  +    ++ T  
Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256


>gi|121612379|ref|YP_001000430.1| cjaC protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005371|ref|ZP_02271129.1| cjaC protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249414|gb|EAQ72374.1| cjaC protein [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 251

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 76/237 (32%), Gaps = 16/237 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++++ L+ LF  + S + +   +      LK G       F     N    GFD
Sbjct: 1   MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++     T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + + L G  I VQ GT     L +              + +
Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                A + ++ DA   D           + P       +       + A  +   +
Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 222


>gi|330811274|ref|YP_004355736.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379382|gb|AEA70732.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 257

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 81/257 (31%), Gaps = 28/257 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLVLLGALALSVLSLPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCVWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFTN 105

Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +S  +++L G +I VQ G+  E    +             +   
Sbjct: 106 KYYNTPARLVMKAGTQVSDGLAELKGKNIGVQRGSIHERFAREVLAPLG--AEIKPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    +           A+ +GD
Sbjct: 164 NEIYLDVSAGRLDGTVADATLLDDGFLKTDAGKGFAFVGPAFTDVKYFGDGVGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAMVTA 251
                 +       + A
Sbjct: 224 -----ALKDKINGAIAA 235


>gi|319782304|ref|YP_004141780.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168192|gb|ADV11730.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 265

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 80/259 (30%), Gaps = 34/259 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       + CL     ++ +            G L  G       ++   A+G+  GFD
Sbjct: 1   MKLKVLTLLACLAGSMGSALAAE----------GELSIGTEGAYPPWSMSDASGNVTGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L + +        ++         AL++K+ D++      T  R+    + F  
Sbjct: 51  ADVGALLCTKL---AVTCHFVVQAFDGLIPALKAKRFDVIISGMSITADRKK--EINFSV 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-------LSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                   F+  K   +++++        L G  + VQAGTT    L             
Sbjct: 106 GYAELANMFVAAKGSDLAAITDVDTLLKSLDGKKVGVQAGTTHAHFLEKRAP----NADL 161

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-------DIISKSPL 226
             ++ ++++     + R D    D SAL              ++        D      +
Sbjct: 162 KTYDTLDQMQIDLASGRIDTAFADQSALQDFLDK-PDGKNFQLVGVEIKSTYDPTLGEGI 220

Query: 227 APAIIQGDTEWYNIVSWTH 245
              I Q +TE    +    
Sbjct: 221 GVGIAQDNTELKAKIDKAL 239


>gi|90961050|ref|YP_534966.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
 gi|90820244|gb|ABD98883.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
          Length = 485

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 30/281 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ I+  +       + N + +           G +     F     N  + G D
Sbjct: 1   MLKKAFIFIVSCLCTLLIFTNLNNNHVNA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+   P+       +LQS QID +      T  R+      F  
Sbjct: 59  IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + K   I+S+ QL G  + ++ GT            +  K   + F+  +
Sbjct: 114 PYYKTGFIMTVAKNSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236
            +          A   D+  +     T  +     I+           A+++G  +    
Sbjct: 172 NMYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTKPAQSGYYGFAVMKGKNQELLH 228

Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263
                         +  IV+        AE+    + + N+
Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269


>gi|300697047|ref|YP_003747708.1| substrate-binding periplasmic (Pbp) abc transporter protein
           [Ralstonia solanacearum CFBP2957]
 gi|299073771|emb|CBJ53292.1| putative substrate-binding periplasmic (Pbp) abc transporter
           protein [Ralstonia solanacearum CFBP2957]
          Length = 254

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 13/218 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +I++ G L          F     +    GF+++  +A+   +      I++  L+   
Sbjct: 26  EEIQQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               LQ  + D++  +   T  R     + F    Y  G   +      I + + L+G  
Sbjct: 82  LLAGLQQNRWDLVISSHGVTEERAK--AVDFTTPHYCSGSSIVAR-DPAIRTAADLTGKV 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ G+T    +    K          F +  +   A  + R DA+  D     AL   
Sbjct: 139 VAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FVALAAI 192

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P  ++ L   +    +A A+ +G+T      +   
Sbjct: 193 QSNPEANLKLGSPLFVERIAAAVAKGNTALAARYNKAL 230


>gi|325204584|gb|ADZ00038.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis M01-240355]
          Length = 268

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252


>gi|292669508|ref|ZP_06602934.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Selenomonas noxia ATCC 43541]
 gi|292648871|gb|EFF66843.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Selenomonas noxia ATCC 43541]
          Length = 265

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 88/323 (27%), Gaps = 71/323 (21%)

Query: 2   YKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
            +    ++I  + +       T              + G +     F        ++ GF
Sbjct: 11  KRCLLGLTIFAVAVFGLAGCGTGEKT-----ASNVWRVGTDASYAPFGFQDEKSHEYVGF 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  RA++     +   +    LN      ALQ+  +DI   +      R  +  + F 
Sbjct: 66  DIDIIRAIAETQGHE---VAIKNLNFDGLIPALQTGDLDIAISDMTINEERAKT--VDFT 120

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++      I+S   L G  I V  G+T          A         F  
Sbjct: 121 DSYYKAGLSMVVRADETRINSFDDLEGLRIGVTIGSTGAEAARGIPNA-----DLHEFST 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +          DA   D            +     ++P  I++  L  A+ +G+ E  
Sbjct: 176 ISDAFLDLYNGGVDAVVNDTPVDEYYVENKGKGIA-KVVPAQINQEDLGIAVKKGNAE-- 232

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
                                                 LG   +               +
Sbjct: 233 -------------------------------------LLGQLNAG-------------LK 242

Query: 299 IIRHMGNYGEMFDRNLGNQSELK 321
            I+  G Y E++ +  G +   K
Sbjct: 243 TIKENGKYAEIYRKWFGKEPPAK 265


>gi|259909461|ref|YP_002649817.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Erwinia pyrifoliae Ep1/96]
 gi|224965083|emb|CAX56615.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding
           protein [Erwinia pyrifoliae Ep1/96]
 gi|283479534|emb|CAY75450.1| putative ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
          Length = 257

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 72/245 (29%), Gaps = 14/245 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K     +L  ++ F  S    A   L  ++  G LK G       F+    +G   GFDV
Sbjct: 2   KSIATLLLAGMVQFGLSSQAMAETELSKVQSAGALKIGTEGTYPPFSYHDTSGKLTGFDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  R ++  +        ++          L +++ D +      T  R       F   
Sbjct: 62  EIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSVP 116

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   I+      I S   L G        T+    LA  + A       +  +   
Sbjct: 117 YISSRAVLIVRSNNSAIKSFDDLKGKKSA-HTLTSNFAQLATRYGA-----QVVGTDGFN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +      + R DA   D  +    K       +  I   + +       + +G+TE    
Sbjct: 171 QSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKGNTELKAA 229

Query: 241 VSWTH 245
           +    
Sbjct: 230 IDKAI 234


>gi|1166636|gb|AAA85769.1| histidine-binding periplasmic protein HisJ [Escherichia coli]
          Length = 260

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 22/261 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +FS+  + L  I +   ++ G +     F    + G+  GFD+D  + L   I    ++ 
Sbjct: 13  AFSSATAALAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQC 67

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++         +L++K+ID +  +   T  R     +AF    Y      ++ K   I 
Sbjct: 68  TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125

Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L G  + V  GTT E    +++    +    + ++  + I +   A R DA   D
Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252
             A     L      ++      +    L        + + D E    ++   +A + A+
Sbjct: 184 EVAAGEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242

Query: 253 ELGITQKNINQVSKDTTNPDV 273
                     +++K   + DV
Sbjct: 243 ------GTYEKLAKKYFDFDV 257


>gi|238762101|ref|ZP_04623074.1| Arginine-binding periplasmic protein 2 [Yersinia kristensenii ATCC
           33638]
 gi|238699829|gb|EEP92573.1| Arginine-binding periplasmic protein 2 [Yersinia kristensenii ATCC
           33638]
          Length = 243

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L  + F++ +              ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATM--LSGMVFSATAAE-----------TIRFAASATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    ++ + L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAPKG-KFTAFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN         +       + L  A+   +T   
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 EKLNKAIEAV 227


>gi|227329294|ref|ZP_03833318.1| arginine-binding periplasmic protein 2 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 243

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I    T+                ++   +     F  + A+ +  GFD
Sbjct: 1   MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S  + + G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P    +   +         L  A+   D  
Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KTNPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNKALDAI 227


>gi|157164376|ref|YP_001467257.1| homoserine kinase (HSK; HK) [Campylobacter concisus 13826]
 gi|112801978|gb|EAT99322.1| arginine-binding periplasmic protein 1 [Campylobacter concisus
           13826]
          Length = 256

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 79/267 (29%), Gaps = 19/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDI-KKRGFL--KCGINTGLVGFAEVKANGDW 56
           M     V  L L++ F      +    + +  +    +  K G +     F  +      
Sbjct: 1   MKNLLKVLALGLVMFFIGCGDDSGKKTVANAPEASKEVVYKVGSSADYPPFEYLDDKNQI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D    ++              ++      AL++ +IDI       T  R     +
Sbjct: 61  VGFEIDLLNEITKKTGIKFDVAN---MSFDGLIPALKTGKIDIAISGMSATDERRK--SV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    YF    FI  K   ++  + L    I  Q GT  E        A  +    I  
Sbjct: 116 DFTKPYYFSENLFIRKKGSDVNKDN-LKDKKISAQVGTLQEE------AAKKITTQSIPA 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-T 235
           E V     +  A + D    D          N    E + LPD       A A  +G  T
Sbjct: 169 ENVAAAIMSLNAGKIDVVLTDSPIGVEFLKQNPDLEEFLRLPD--GTEGFAMAFDKGKHT 226

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN 262
           +    +      +  + E        +
Sbjct: 227 DLIKKIDAAIEELQKSGEFDKMLAKYD 253


>gi|325678864|ref|ZP_08158462.1| ABC transporter, substrate-binding protein, family 3 [Ruminococcus
           albus 8]
 gi|324109368|gb|EGC03586.1| ABC transporter, substrate-binding protein, family 3 [Ruminococcus
           albus 8]
          Length = 283

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 80/253 (31%), Gaps = 18/253 (7%)

Query: 3   KDFFVSIL--CLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58
           K    ++L   ++   F+               G      G +     +     NG++ G
Sbjct: 4   KRVMAAVLGMAVVAAAFSGCGAKGEKGEKKSADGKKTFTVGFDAEFPPYGFKDDNGEYVG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+     +     +D   ++  P++   + + L S  ID +          +      +
Sbjct: 64  FDLSLAEEVCKR--NDWELVK-QPIDWDSKDMELSSGSIDCIWNGFTINGREDS---YTW 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN----MKYH 172
                 + Q  ++    GIS +  L+G  + VQA ++    L   D    +         
Sbjct: 118 STPYIDNSQVVVVKADGGISDLKGLAGKVVIVQADSSALHALDGEDASDENKALAATFAD 177

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                          +   DA   D     A    + R   +VIL + +S        ++
Sbjct: 178 LQQVGDYNTAFLNLESGAADAICMDY--GVAAYEVSSRGDAYVILDENVSTERYGVGFLK 235

Query: 233 GDTEWYNIVSWTH 245
           G+TE  + V  T 
Sbjct: 236 GNTELRDKVQDTL 248


>gi|293395142|ref|ZP_06639428.1| histidine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
 gi|291422319|gb|EFE95562.1| histidine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
          Length = 260

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F V  L + +   +S                LK G +     F    A G+  GFD
Sbjct: 1   MKKRFLVVPLVMALAAASSAFAAIPT--------TLKIGTDPTYAPFESKNAKGELVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L   I    ++  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLATELCKRI---NTQCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G S+ V  GTT E      ++        + ++  
Sbjct: 108 KLYAANARLIAPKGAKILPSVDSLKGKSVGVLQGTTQEAYANANWQPKG--VTVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   + R DA   D  A     L      ++    + +             + + D
Sbjct: 166 DLVYADLASGRIDAAFQDEVAGSDGFLKQPPGKDYAFAGEAVKDDKFFGVGTGMGLRKTD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE          A+  A          ++ +K   + DV
Sbjct: 226 TELKA-------ALDKAFAEMRKDGTYDKFAKKYFDFDV 257


>gi|171321439|ref|ZP_02910387.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MEX-5]
 gi|171093285|gb|EDT38485.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MEX-5]
          Length = 257

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 82/255 (32%), Gaps = 24/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L  +   + + + S          ++ G++     F    A+G   GFD
Sbjct: 1   MKK--LALSIALACIAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    + + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 50  VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   +  +   L G SI V+ GT  E     Y+         + ++  
Sbjct: 105 KLFNTPTRLVSKKGTHLQPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VQVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           + +     + R DA   D        L   R +        I       +     + + D
Sbjct: 163 DGVYQDLMSGRLDAALQDAVQAEIGFLKTPRGANFEFAGKDIDDPKTLGNGAGIGLRKDD 222

Query: 235 TEWYNIVSWTHYAMV 249
            +    +      ++
Sbjct: 223 ADLKAKIDHAIADII 237


>gi|300213989|gb|ADJ78405.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius CECT 5713]
          Length = 411

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 89/281 (31%), Gaps = 30/281 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ I+  +       + N + +           G +     F     N  + G D
Sbjct: 1   MLKKAFIFIVSCLCTLLIFTNLNNNHVKA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+   P+       +LQS QID +      T  R+      F  
Sbjct: 59  IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + K   I+S+ QL G  + ++ GT            +  K   + F+  +
Sbjct: 114 PYYKTGFIMAVAKNSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236
            +          A   D+  +     T  +     I+           AI++G  +    
Sbjct: 172 NMYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTKPAQSGYYGFAIMKGKNQELLH 228

Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263
                         +  IV+        AE+    + + N+
Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269


>gi|229587936|ref|YP_002870055.1| putative ABC transporter substrate-binding protein [Pseudomonas
           fluorescens SBW25]
 gi|229359802|emb|CAY46652.1| putative ABC transport system, substrate-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 266

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 90/251 (35%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +  ++L   + +       A  + D  +RG LK G     V F      G   GF+
Sbjct: 1   MSKGYCSALLISAVAWIHMGLAQAGAIDDAVRRGALKVGTTPTYVPFEMTDKQGRIVGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + +S A+  +   ++ + +   E    LQ+K+ D++      T  R  +L L F  
Sbjct: 61  IDLLKVMSQALGVE---LELVTVPYTELVAGLQAKKFDLIGSGMTVTQER--NLKLNFSD 115

Query: 121 ITYFDGQGFIMH-----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                GQ  ++H     K   +  +   +   I    GTT E     +  A         
Sbjct: 116 SFIVVGQSVVLHPRLLGKVSSVEDLDD-ASYRIATTEGTTGEAAARRFLGAA----RISS 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F   EE      A   DA+  D           +  +  + L    +  PLA  + +GD 
Sbjct: 171 FATPEEGVRQVLAGAADAFIHDAPYNLIALSRPENST-LLALEQPFTFEPLAFGLKKGDF 229

Query: 236 EWYNIVSWTHY 246
           +  N ++    
Sbjct: 230 DSLNWINHFLN 240


>gi|227515035|ref|ZP_03945084.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate binding protein [Lactobacillus fermentum ATCC
           14931]
 gi|227086611|gb|EEI21923.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate binding protein [Lactobacillus fermentum ATCC
           14931]
 gi|299783275|gb|ADJ41273.1| Amino acid ABC superfamily ATP binding cassette transporter
           substrate binding protein [Lactobacillus fermentum CECT
           5716]
          Length = 276

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 29/270 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           K +   ++   ++   + S         S + DIKK+G L  G +     +         
Sbjct: 4   KKWLKMLMVAALVVMGAVSLAGCSSSSDSSVQDIKKKGELVVGTSADYPPYEFQIVKNGK 63

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G+DV+    ++  I      ++++ +        LQ+K+ D++     WT  R   
Sbjct: 64  QQIVGYDVELAHLIAKNIGVKK--VKFVNIAFPSLISELQNKKFDMVMAGMVWTKERAK- 120

Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             ++F    +  GQ  ++ K  +   S +S L GA++  Q  +  E              
Sbjct: 121 -AVSFSSTYHHGGQVLLVSKANENKYSGISALKGATLGAQQSSEQET-----IGKSLSGV 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SP 225
             +    +  +    +A   D      ++  A     + P+++ I  +I  K       P
Sbjct: 175 KLVTESSITTLSQEVKAGTLDGLILAQTS--ADAFVAEHPNDYAIAKNITFKISAKTSDP 232

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + + D     +V+ T      + EL 
Sbjct: 233 -RVVVRKSDKALLKVVNKTIKDAKKSGELD 261


>gi|241554177|ref|YP_002979390.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863483|gb|ACS61145.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 257

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 91/276 (32%), Gaps = 26/276 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M      ++     L  ++ +  A           ++ G+ N     F    A+G W+G+
Sbjct: 1   MK--LLPTLFAGAALVLSAVTAQA----------EVRFGVMNESYPPFFAKDASGQWQGW 48

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+   +     K   + ++      ALQSK+ D++  +   T  R     + F 
Sbjct: 49  EIDLMNAVCEQM---KEKCSIVEISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 103

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K +   ++   + G +I +Q  T        YF           ++ 
Sbjct: 104 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFAEA---AEEKTYQT 160

Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           ++E      + R D   GD  AL   LK    +     +      K  L   +  G  + 
Sbjct: 161 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEILGAGVSGGLRKE 220

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
              +       + A          + ++K   + D+
Sbjct: 221 DTELKAKLNTAIAA---VRASGQYDAINKKYFDFDI 253


>gi|325685987|gb|EGD28048.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 500

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 26/264 (9%)

Query: 1   MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K      ++L L  LF  +             + +++  IKK G L  G++       
Sbjct: 1   MKKLIKIMTALLLLAGLFTAAIPAVDAASSKKMASGTVMKKIKKSGKLVVGMSADYPPLE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
               V     + G DV+  + ++  +      ++   ++     +AL++ +ID++     
Sbjct: 61  FTKNVNGRNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117

Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R+    + F  I Y    D        K   +S +   G ++  Q G+    +L  
Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                 +K   +       +  A ++ + DA             TND     V      +
Sbjct: 176 NAAKSGIKVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYATNDTSLSLVKSSLSQA 232

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246
           +   A  + +G  +    ++ T  
Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256


>gi|134291672|ref|YP_001115441.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134134861|gb|ABO59186.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 268

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + +  ++L   +    + +   +  L  I K G L+  +      F  V  +   +G+D
Sbjct: 10  RRTWLAALLAASVTALFAAAPAQADALDTIAKSGTLRVAVPEDYPPFGSVGTDMQPQGYD 69

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+ A+      +  +P+N+  R   L + ++D++  +   T  RE    + F  
Sbjct: 70  IDMAGLLARALGVK---LALVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 QG        +S+ + L+G ++    G   E+ L               FE   
Sbjct: 125 AYAPYFQGVFGPADVKVSTPADLTGKTVGATRGALEEIALTQLAP----NATIKRFEDNN 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P     +  +I  SP    + + +      
Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238

Query: 241 VSWTH 245
           +    
Sbjct: 239 IDDAI 243


>gi|322833795|ref|YP_004213822.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321168996|gb|ADW74695.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 259

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L   +  F++ +  +           LK G+      F    A G+ +GFD
Sbjct: 1   MKKLKIALLLGCAVASFSALADGS----------TLKFGLEAQYPPFESKSATGELQGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ +A      K  +   +      ALQ+++ D ++   + T  R     + F  
Sbjct: 51  IDLGNAVCAAA---SVKCDWYDTSFDGLIAALQARKFDAINSAMNVTDKR--RQAIDFTN 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      I  K  G + +   L G  I V  G+  E     ++    +    + ++  
Sbjct: 106 VIYRVPTKLIAKKDSGLLPTTESLKGKHIGVLQGSIQESYAQAHWAPKGVD--IVSYQDQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            ++     + R D       A     L+     ++  + D +         +A  + +GD
Sbjct: 164 NQVYLDLSSGRLDGTLVLAPAGQTGFLSRPDGKDYGFVGDAVRDDKILGSGIAFGLRKGD 223

Query: 235 TEWYNIVSWTH 245
           T+    +    
Sbjct: 224 TQLKEKLDTAI 234


>gi|293552749|ref|ZP_06673410.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium E1039]
 gi|294615207|ref|ZP_06695088.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1636]
 gi|294620019|ref|ZP_06699384.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1679]
 gi|291591931|gb|EFF23559.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1636]
 gi|291593741|gb|EFF25250.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1679]
 gi|291603058|gb|EFF33249.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium E1039]
          Length = 278

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    +++       ++  T A     +   +++K+  L    +  L   +      +
Sbjct: 1   MKKKRLFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  + ++  +     KI +   N   +  ++   + D  + +   T  RE    
Sbjct: 61  LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKGESDFAANDFGITKEREKKFS 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L+      FD          GI S+  L G     +  T+         + H  K     
Sbjct: 118 LSEPFKYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               ++  +     R D    D                 ++     +++     + +G+ 
Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233

Query: 236 EWYNIVSWTHYAMVT 250
                +      M  
Sbjct: 234 ALKKKIDGVLKEMKE 248


>gi|269968082|ref|ZP_06182119.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio alginolyticus 40B]
 gi|269827328|gb|EEZ81625.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio alginolyticus 40B]
          Length = 247

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 85/258 (32%), Gaps = 21/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L      + +              +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +K  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCKEI---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFTN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K+  ++    L G  + VQ G+T +  L +           + +   +
Sbjct: 107 AYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221

Query: 239 NIVSWTHYAMVTAEELGI 256
           N ++     +    E  +
Sbjct: 222 NKLNTALKTVKANGEYDV 239


>gi|237799756|ref|ZP_04588217.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022611|gb|EGI02668.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 273

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFSFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNATDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLADESLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|86138396|ref|ZP_01056970.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Roseobacter sp. MED193]
 gi|85824921|gb|EAQ45122.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Roseobacter sp. MED193]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 89/246 (36%), Gaps = 15/246 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F + L L   F T+    A  L  IK+ G ++  ++     F  V  + +  GFD     
Sbjct: 12  FAAGLALAATFTTANFAAAEELDQIKEDGVIRIAMSGAYPPFNFVNDSNEVVGFDPAVGA 71

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +  +   ++ +          L + + D +  +   T  R     + F    Y  
Sbjct: 72  EIAKRMGVE---VEIVTTAWDGIIGGLLANKYDAIVGSMSITEER--QQVVDFVGPYYTT 126

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            +     K  GI+S + L  A + +  G T E    +      M Y    ++ + E+   
Sbjct: 127 KRAI-FAKPGGITSAAALGDAKVGLTLGETHEAWARE------MGYDVRTYKGLPELLLE 179

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWT 244
               R D    D   + A+    +   ++V++ D  ++      AI +G+ E    +   
Sbjct: 180 LEHGRVDVIVNDS--IAAILAMKETGQDYVMITDFETEEFGAGIAIRKGNPELAAAMQGA 237

Query: 245 HYAMVT 250
             AM+ 
Sbjct: 238 LDAMME 243


>gi|238020028|ref|ZP_04600454.1| hypothetical protein VEIDISOL_01904 [Veillonella dispar ATCC 17748]
 gi|237863552|gb|EEP64842.1| hypothetical protein VEIDISOL_01904 [Veillonella dispar ATCC 17748]
          Length = 261

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 93/324 (28%), Gaps = 73/324 (22%)

Query: 1   MY-KDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56
           M  K     +    +    F +   N             + G +     F      +G  
Sbjct: 1   MKFKKIATLLGAFTIASSLFIAGCGNTGTSQK-----TWRVGTDATYAPFGFKDKDSGKL 55

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD   A++     +        LN      ALQS  IDI   +       + +  +
Sbjct: 56  AGFDVDIINAIAQEEGVEADV---QNLNFDALLPALQSNTIDIAISDMTI--SEDRAKSV 110

Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    Y  G G +++     I+S   L G  I V  G+T     +    A   +++ IV
Sbjct: 111 DFSKPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVRQFNLIV 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                +     +    D    D         +  +     +  +    +PL  A+ +G+T
Sbjct: 171 -----DAFLELQNRGVDVVINDTPVNEYYVNSKGKGIA-KVTGEDYDAAPLGIAVKKGNT 224

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           E  N V+                                               GL K  
Sbjct: 225 ELLNKVND----------------------------------------------GLAK-- 236

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSE 319
               I+  G Y E++ +  G +  
Sbjct: 237 ----IKANGKYAEIYKKWFGKEPP 256


>gi|237785696|ref|YP_002906401.1| glutamate ABC transporter solute-binding protein [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758608|gb|ACR17858.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium kroppenstedtii DSM 44385]
          Length = 317

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 22/274 (8%)

Query: 3   KDFFVSILCLIILF--FTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +    ++  L+ +    T+  ++   S+L +IK  G +  G      G      +  + G
Sbjct: 30  RAMMAAVTALVFVTPTLTACGSSEPVSVLDEIKA-GHIVVGTKYDQPGMGMRTPDKKFVG 88

Query: 59  FDVDFCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            D D  R     ++     D  KI +    + +R   +++ ++ +++        R  + 
Sbjct: 89  VDPDVSRYVIDHIAEKNGWDKPKITWRETPSAQRETLIKNGEVGMITATYSINKGR--AN 146

Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172
            +AF        Q  ++  K  GI S++ L+ G  +C  +G+T    + +          
Sbjct: 147 AVAFGGPYLVTHQALLVRDKDTGIKSLTDLNKGKRLCSVSGSTPAQKVKEALPE----VQ 202

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII----SKSPLAP 228
              F+       A    + DA T D + LY            V +        +      
Sbjct: 203 LQEFDSYSSCVEALHQKKVDALTTDATILYGFATQYPGEFRVVDMKQDDGSWWTDEHYGI 262

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261
              +GDT+    ++     M  +     I  KN+
Sbjct: 263 GHAKGDTKSTEAINDALKDMWASGAYASIVHKNL 296


>gi|260222060|emb|CBA31247.1| Lysine-arginine-ornithine-binding periplasmic protein [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 261

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 25/266 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F  ++L  + L                    ++ G  +    F    A+G  KG +
Sbjct: 1   MKRQFVKALLSGLFLAAGLAQAQ----------DVVRIGTLSDYPPFEYKDASGQLKGME 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+   +    +K +Y+ ++      AL++K+ID +      T  R     + F  
Sbjct: 51  IELGNAMCKHM---QAKCEYVTMDFDALIPALKAKKIDAVLAQMSITAERSKV--VDFTD 105

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           +       ++     GI+   + L G ++ V +G+ +E                  +   
Sbjct: 106 LFTLAPVQYVAKVGSGINEDPATLRGKTVGVYSGSNSETYFKKRLPKSKSGIVTKAYPNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           + I     A R +    D +  Y       +          ++           A+ +GD
Sbjct: 166 DAIWLDLEAGRLNTTLTDTTVAYEWLQKTGKAKGFDFAGKPVNDVEIFGEGTGIAVRKGD 225

Query: 235 ---TEWYNIVSWTH-YAMVTAEELGI 256
                +   +          AE   +
Sbjct: 226 ALKARFNAAIKKVLADGTFAAENKKV 251


>gi|146309284|ref|YP_001189749.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
 gi|145577485|gb|ABP87017.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 250

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 73/220 (33%), Gaps = 10/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               LK G       F  + A+G   GFDV+  +AL + +    ++ + +  +      A
Sbjct: 23  AADKLKLGTEGAYPPFNLIDASGKVTGFDVEIGQALCAKM---QAECEVVTSDWDGIIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +K+ D L  +   T  R+    + F    Y +   FI  K     +    L G  I  
Sbjct: 80  LNAKKFDFLIASMSITEERQA--AVDFTEPYYTNKLQFIAPKSAEFKTDEASLKGKVIGA 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  T     L D            +++  E       + R D    D    +    ++  
Sbjct: 138 QRATIAGTWLEDNL---GKVVDIKLYDTQENAYLDLASGRLDGVLADTFVNWEWLKSDAG 194

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +       +     +  A+ +GD      ++    A++ 
Sbjct: 195 KNFEFKGDPVFDNDKIGIAVRKGDP-LREKLNTALQAIIE 233


>gi|329727185|gb|EGG63641.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 485

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWKKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|260887996|ref|ZP_05899259.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Selenomonas sputigena ATCC 35185]
 gi|260862247|gb|EEX76747.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Selenomonas sputigena ATCC 35185]
          Length = 251

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 68/242 (28%), Gaps = 14/242 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L    +        A+          +  G++        +    +  GFDV+  +  +
Sbjct: 1   MLAAGFMAGCGGQKAAND-----APKKIVIGLDDNFPPMGFLDEKNEITGFDVELAKEAA 55

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +  +   +++  ++   +   +QS +ID L    + T  R+    L F      D Q 
Sbjct: 56  KRLGTE---VEFKGIDWASKEAEIQSGRIDALWNGLEITEERKK--NLLFSEPYMNDQQV 110

Query: 129 FIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                    I+    L    +  Q+ + T     D  K          +           
Sbjct: 111 IFKRANDASIAKEDDLKDKIVATQSASGTAEDYVDGHKDVTGYKDVKKYADYLSAFMDLE 170

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHY 246
             R DA   D          +  P +   L   +   +    A  + DT     +     
Sbjct: 171 NGRVDAIVCDEII--GRYYMSKHPDKIAALDGHVGPVTQFGVAYRKDDTALKEKMQKVLD 228

Query: 247 AM 248
            M
Sbjct: 229 EM 230


>gi|94500104|ref|ZP_01306638.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Oceanobacter sp. RED65]
 gi|94427677|gb|EAT12653.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Oceanobacter sp. RED65]
          Length = 250

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 81/252 (32%), Gaps = 30/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    ++   + L  ++ + +            ++  ++     F     +G   GF+
Sbjct: 1   MKRQLL-TLFSALALSVSANAADP-----------IRVAVDAPYPPFEYKAPDGSLTGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+   I        ++          L +++ D++  +      R+    + F  
Sbjct: 49  IELGNAVCQEITK--QDCDWVIQAWDGIIPGLLARKYDMIFSSMSINEKRK--QKVLFSE 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     F   K  G  + +   G  I VQ  T  +  L +  K        + +   +
Sbjct: 105 PYYQTPSAFFAEKGNG-FNPTDSKGKRIGVQRATVQDTYLTEMHKEA----EIVRYTTAD 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SPLAPAIIQGD 234
           ++    +  R DA   D     ++         +  + D+++K        +A A  + +
Sbjct: 160 DMVIDLKGERLDALFVDAPVGESM---LKDDKGYEQVGDMVNKPVSIFGEGIAAAFNKRN 216

Query: 235 TEWYNIVSWTHY 246
            +    VS    
Sbjct: 217 KDLEKKVSAALK 228


>gi|299068867|emb|CBJ40108.1| putative substrate-binding periplasmic (Pbp) abc transporter
           protein [Ralstonia solanacearum CMR15]
          Length = 255

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 13/223 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A    +IK+ G L          F     +    GF+++  +A+   +      I++  
Sbjct: 22  QARSYEEIKQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKT 77

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+       LQ  + D++  +   T  R     + F    Y  G   +      I + + 
Sbjct: 78  LSFDSLLAGLQQNRWDLVISSHGVTETRAK--AVDFTSPHYCSGSSIVAR-DPAIRTAAD 134

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+   + VQ G+T    +    K          F +  +   A  + R DA+  D     
Sbjct: 135 LTDKVVAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FV 188

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           AL      P   + L   +    +A A+ +G+T      +   
Sbjct: 189 ALAAIQSNPGAGLKLGSPLFVERIAAAVAKGNTALAASYNTAL 231


>gi|82880401|gb|ABB92746.1| sensor protein FLII81PE [synthetic construct]
          Length = 753

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 6/210 (2%)

Query: 50  VKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           + +N    G+  D+  A+  A+         +++ +P+ ++ R   LQ+   D    +T 
Sbjct: 264 LGSNQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTT 323

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
             + R+      F    +  G   +  K   I   + L   ++ V +GTT+E+ L    +
Sbjct: 324 NNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNE 381

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
              M    I  +   +      + R  A+  D + L   +    +P    I+    S+  
Sbjct: 382 EQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEA 441

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + + D ++  ++  T   + T+ E  
Sbjct: 442 YGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 471



 Score = 45.8 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 11/32 (34%)

Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            S L  I K G +  G     V F+     G
Sbjct: 1  AGSTLDKIAKNGVIVVGHRESSVPFSYYDVAG 32


>gi|238786811|ref|ZP_04630612.1| Amino acid-binding protein [Yersinia frederiksenii ATCC 33641]
 gi|238725179|gb|EEQ16818.1| Amino acid-binding protein [Yersinia frederiksenii ATCC 33641]
          Length = 262

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 84/246 (34%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +   CL  +   S +  A              G       F    +    +GFD
Sbjct: 1   MFKRLMLVGTCLAAVLSASSAMAAEP--------TYVVGSGGTYRPFEYENSQKQLEGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+  A   +  +++ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 53  IDIIKAIGKA---EGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   + S++ L   ++ V   +T ++ ++D    +        F+   
Sbjct: 108 PYFPAEQTIVVPKDSKVDSIAALKNLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+        T+   +  ++  D   +     A+ +G+ E  N 
Sbjct: 166 LMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFQLVSDDKFERQYFGIAVAKGNEELRNK 225

Query: 241 VSWTHY 246
           ++    
Sbjct: 226 INSGLQ 231


>gi|303231763|ref|ZP_07318485.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella atypica ACS-049-V-Sch6]
 gi|302513554|gb|EFL55574.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella atypica ACS-049-V-Sch6]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 88/251 (35%), Gaps = 15/251 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++ +  +   +   +       ++ G L+ G  T    F   + +  + GFDV
Sbjct: 5   KKLTAIALVAVAAMGLLAGCGSEKS-KMTQEAGVLRVGSETTFPPFEFTEGD-KYVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++  +     K+++  +       A+QS  ID+++   + T  RE    L F  +
Sbjct: 63  DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINSTPEREK--ALDFSDV 117

Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +      I ++ +L+G ++ VQ GT                      +  
Sbjct: 118 YFDQGGFITVVRKDNTSIHNMDELAGKTVGVQIGTVPVD-----MAKAIPNTTVKEMDSN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I    +A   D    D  A+    L      +  ++ +      +   + +G+ E  +
Sbjct: 173 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADKDLKLVGEPTKAPGIVLGVKKGNKELQD 231

Query: 240 IVSWTHYAMVT 250
            V+     +  
Sbjct: 232 AVNKALKELKE 242


>gi|293605112|ref|ZP_06687504.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292816515|gb|EFF75604.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 247

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 13/212 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++   +        V  +G   GFD++   AL+ A+      ++++ ++ K    ALQ+
Sbjct: 28  TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAGAMGKK---VEWIDIDFKGLIPALQA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + DI       T  R     + F    Y  G   +      I ++  L G  + VQ GT
Sbjct: 84  GRADIAVSAIYITPERSKV--VDFTDPYYAGGLVVLTKADGPIKTLKDLDGRKVSVQVGT 141

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L ++F +       +  E+ +E+    +  R DA         A KL     +  
Sbjct: 142 KSVNYLKEHFPS----VQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTTGL 194

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            +L D I+      A+ +   E    ++    
Sbjct: 195 TVLGDQITTEDYGIAVPKSKPELTRELNAALQ 226


>gi|227891736|ref|ZP_04009541.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
 gi|227866461|gb|EEJ73882.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
          Length = 485

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 90/281 (32%), Gaps = 30/281 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ I+  +       + N + +           G +     F     N  + G D
Sbjct: 1   MLKKAFIFIVSCLCTLLIFTNLNNNHVNA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+   P+       +LQS QID +      T  R+      F  
Sbjct: 59  IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + K   I+S+ QL G  + ++ GT            +  K   + F+  +
Sbjct: 114 PYYKTGFIMAVAKNSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236
            +          A   D+  +     T  +     I+ +         A+++G  +    
Sbjct: 172 NMYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTNPAQSGYYGFAVMKGKNQELLH 228

Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263
                         +  IV+        AE+    + + N+
Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269


>gi|261340702|ref|ZP_05968560.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Enterobacter cancerogenus ATCC 35316]
 gi|288317118|gb|EFC56056.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Enterobacter cancerogenus ATCC 35316]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 88/245 (35%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D    L   I    ++  Y+         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAKGELVGFDIDLANELCKRI---KAQCTYVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           K+ID++  +   T  R     +AF    Y      ++ K   I      L G  + V  G
Sbjct: 84  KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKSSDIQPTLDSLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  E I A   A R DA   D  A     L      +
Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      I    L        + + D E    ++   +A + A+         ++++K  
Sbjct: 200 YKFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYDKLAKKY 252

Query: 269 TNPDV 273
            + +V
Sbjct: 253 FDFNV 257


>gi|125623402|ref|YP_001031885.1| arginine-binding periplasmic protein 1 precursor [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124492210|emb|CAL97139.1| Arginine-binding periplasmic protein 1 precursor [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300070149|gb|ADJ59549.1| arginine-binding periplasmic protein 1 precursor [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 273

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 81/271 (29%), Gaps = 26/271 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           K   + ++ L  +   +   N       +  +KK G LK  ++     F           
Sbjct: 6   KKMTLGLVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKNT 65

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DVD   A+   +      ++   ++      +L + + DI          RE    
Sbjct: 66  VVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK--S 120

Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F  + Y      ++ K      SSV    G  +  Q G+  E  +   FK        
Sbjct: 121 VNFSDVYYTASNYLVVKKSDLSKYSSVDDFKGKKVAAQKGSIQEGIVTSQFK----GTTE 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAII 231
           I   ++ +     +  +      +     +    N        +     K       A+ 
Sbjct: 177 IALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVEVKTPKDSYGSAVALP 235

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           +G  E   +V+         EEL   Q N +
Sbjct: 236 KGSDELTKVVNSVIK-----EELKNGQINKD 261


>gi|170735478|ref|YP_001774592.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169821516|gb|ACA96097.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 268

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 86/245 (35%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + +  ++L   +I  F +   +A  L  I K G L+  +      F  V  +   +G+D
Sbjct: 10  RRTWLAALLAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+ ++      ++ +P+N+  R   L + ++D++  +   T  RE    + F  
Sbjct: 70  IDMAGLLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 QG        +S+ + L+G ++    G   E+ L+              FE   
Sbjct: 125 AYAPYFQGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P     +  +I  SP    + + +      
Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238

Query: 241 VSWTH 245
           +    
Sbjct: 239 IDDAI 243


>gi|330505508|ref|YP_004382377.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
 gi|328919794|gb|AEB60625.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
          Length = 250

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 72/220 (32%), Gaps = 10/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               LK G       F  + A+G   GFDV+  +AL + +    ++ + +  +      A
Sbjct: 23  AADKLKLGTEGAYPPFNLIDASGKVTGFDVEIGQALCAKM---QAECEVVTSDWDGIIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +K+ D L  +   T  R+    + F    Y +   FI  K     +    L G  I  
Sbjct: 80  LNAKKFDFLIASMSITEERQA--AVDFTEPYYTNKLQFIAPKSADFKTDEASLKGKVIGA 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  T     L D            +++  E       + R D    D    +    ++  
Sbjct: 138 QRATIAGTWLEDNL---GKVVDIKLYDTQENAYLDLASGRLDGVLADTFVNWEWLKSDAG 194

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    +     +  A+ +GD      ++    A++ 
Sbjct: 195 KDFEFKGDPVFDNDKIGIAVRKGDP-LREKLNTALQAIIE 233


>gi|325293716|ref|YP_004279580.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Agrobacterium sp. H13-3]
 gi|325061569|gb|ADY65260.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Agrobacterium sp. H13-3]
          Length = 256

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 90/254 (35%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M   FF ++L       ++F+ +A           ++ GI N     F    A+G W+G+
Sbjct: 1   MK--FFATLLAGTAFAVSAFTASAD----------VRFGIMNESYPPFFAKDASGKWQGW 48

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+ + +     K   + L+      ALQ+K+ D++  +   T  RE    + F 
Sbjct: 49  EIDLMDAVCAEM---KEKCSIVELSWDGLIPALQTKKFDVIWSSMSNTEEREKV--IDFT 103

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K     ++   + G +I +Q  T        YF A         ++ 
Sbjct: 104 NKYYNTPSKLIGAKDGKPGAAPEDVKGKTIGIQVATIQSEYYKKYFAA---VADEKTYQT 160

Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           ++E      A R D   GD   L   +K    +     +      K  L   +  G  + 
Sbjct: 161 LDEAFQDLAAGRIDYVFGDSLVLDAFVKSDAGKDCCADMGNVADDKEILGLGVSGGLRKD 220

Query: 238 YNIVSWTHYAMVTA 251
              +     A + A
Sbjct: 221 DTELKNKLNAALAA 234


>gi|298291725|ref|YP_003693664.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296928236|gb|ADH89045.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 266

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 13/261 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++            +  A +L DI     ++   +  +     + ++    G D
Sbjct: 1   MLKHSVLAAALAAAFLVGGTAAKADLLDDIMAAKKIRISTDLAIPPSGMMDSSMKPVGSD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    L+  +      I+++      R   LQ+ + D++      T  R     + F  
Sbjct: 61  VETAELLAKDLG---LTIEWVQTTGATRIPNLQTNKADVVISTLSVTPERAKV--IDFTD 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                       K   +     L G +I V  GTT +  L +  K     ++   ++   
Sbjct: 116 PYAALESVVGGLKTIEVKDWDGLKGKTIAVSRGTTQDTALTNRAKEGG-GFNVARYDDDA 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  A    + D      +     ++    P+       +I+   LA  + +G+      
Sbjct: 175 TMVTAAVTGQADFIATSATI--VNQIGVKNPARAFEPKVLITTFNLAMGVKKGEPRL--- 229

Query: 241 VSWTHYAMVTAEELGITQKNI 261
                   + AE +   + N 
Sbjct: 230 -KAKLNEWI-AENIKNGKLNA 248


>gi|288905590|ref|YP_003430812.1| amino acid ABC transporter (binding protein) [Streptococcus
           gallolyticus UCN34]
 gi|288732316|emb|CBI13886.1| putative amino acid ABC transporter (binding protein)
           [Streptococcus gallolyticus UCN34]
          Length = 271

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 82/253 (32%), Gaps = 16/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K F   IL +I+   ++ S++  +    I+ +G +     +    F     +      
Sbjct: 1   MKKFFRRFILLIIVGSLSACSSSTGVSQSSIQDKGKIVIATESEFAPFEFKTLIDGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++   A++ A+  D     +  ++      ++ S + DI       T  R+     
Sbjct: 61  VGADIELGNAIADALGVDAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AY 115

Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +++  L+G ++  Q G+  E    D           +
Sbjct: 116 DFSDAYYEAENIVIIKKSDEATYTTLESLAGKAVGAQKGSIQENIAKDQLP----DSSLV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    + ++      + +        ND      +  +       A A  +G 
Sbjct: 172 SLTSNGEMINELKNNQLQTVVLEKAIAEGYVSQNDDLMIADMTLESSDTDAYAVAFAKGT 231

Query: 235 TE-WYNIVSWTHY 246
            +   + V+    
Sbjct: 232 DQDLIDTVNDVIK 244


>gi|240850319|ref|YP_002971712.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella grahamii as4aup]
 gi|240267442|gb|ACS51030.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella grahamii as4aup]
          Length = 250

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L +    FT  +              LK         F+ + +N   +G D
Sbjct: 1   MK--LLAGALIISAALFTQLA----------DAKTLKIASEGTYPPFSYIDSNNKLQGLD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  + +     L +K+ D +  +   T  R     + F  
Sbjct: 49  IDISYALCKKMNVE---CTVVTQDFEGMIPGLIAKKYDAIIASLSLTQER--LQKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+ K  GI   S     G ++ VQ+ TT      D++ +   +    ++  
Sbjct: 104 PYYDTALAVIVTKASGIKEISTQDFRGKNLGVQSNTTQAFYAEDHYAS--EEVKIKLYPS 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E++     HR D    D            +    ++     +K P+A A+ Q + +  
Sbjct: 162 TIEVNRDLLNHRLDVIIVDKLQALNWLKNEGKDCCLLLGTLEETKFPVAIALRQNNNDLK 221

Query: 239 NIVSWTHY 246
           N  +    
Sbjct: 222 NKFNKALK 229


>gi|327438809|dbj|BAK15174.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Solibacillus silvestris
           StLB046]
          Length = 259

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 73/246 (29%), Gaps = 9/246 (3%)

Query: 3   KDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +  F   + L    +  T+   + S     K+   +  G       F  +   G+  G D
Sbjct: 4   RKLFKWAAPLAAASMILTACGADESTSTGDKEYTKIVAGTEATYAPFEYLDDKGNVVGLD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A+   +  +        +        + + ++D+ +     T  R+      F  
Sbjct: 64  SEILAAIGEEMGIETEV---KNVGWDSMMSQVTNGEVDMGAAAITITDERKE--SYDFTD 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +  +   ++S+  +    I VQ  TT  +   +           + +E   
Sbjct: 119 PYYEATLLIVTKEGSTVASLEDIKDKKIAVQINTTGHIAAQELQGVA--SSKILAYENFS 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                      DA  GD + +      N       +  +   K      + +G+ E  +I
Sbjct: 177 VALTEVLTGAADAAIGDNAVILDYLENNPDSGLKAVEDNSFEKDYFGFMVKKGNKELLDI 236

Query: 241 VSWTHY 246
           ++    
Sbjct: 237 LNEGLQ 242


>gi|311278730|ref|YP_003940961.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
 gi|308747925|gb|ADO47677.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cloacae SCF1]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KVRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   +   +S L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVKKGSPVTPELSTLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      I    L        + + D E    ++   +A + A+         ++++K  
Sbjct: 200 YQFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAQMRAD------GTYDKLAKKY 252

Query: 269 TNPDV 273
            + +V
Sbjct: 253 FDFNV 257


>gi|224583158|ref|YP_002636956.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224467685|gb|ACN45515.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 97/264 (36%), Gaps = 26/264 (9%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           F ++ S  A+I   I      + G +     F    A G+  GFD+D  + L   I    
Sbjct: 14  FSSATSAFAAIPQKI------RIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---N 64

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           ++  ++         +L++K+ID +  +   T  R     +AF    Y      ++ K  
Sbjct: 65  TQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNS 122

Query: 136 GIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            I  +V+ L G  + V  GTT E    +++    +    + ++  + I +   A R DA 
Sbjct: 123 DIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAA 180

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
             D  A     L      ++      +    L        + + D E    ++   +A +
Sbjct: 181 FQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEM 239

Query: 250 TAEELGITQKNINQVSKDTTNPDV 273
            A+          +++K   + DV
Sbjct: 240 RAD------GTYEKLAKKYFDFDV 257


>gi|298293081|ref|YP_003695020.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296929592|gb|ADH90401.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 265

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G       +     +G   GF+VD   A+ + +     +I ++ +   E   AL  
Sbjct: 32  VLRVGTFPDNPPWEFR-EDGHLVGFEVDLIEAIGTRLG---MRIDFVGMAFGELLPALAG 87

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID+   +   T  R       F    Y   QG ++ K   + S+  L+G  +  +AG+
Sbjct: 88  DRIDVAMCSMSITPERRR--RFDFTQPYYRTSQGMVVMKSARVRSLEDLAGKRVGTEAGS 145

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E  L+D    +      +    +E       A   DAY GD+ AL    L     +  
Sbjct: 146 TNEQWLSDNRARYGFGPT-VPVVGLERALELLSAGEIDAYFGDLPALLYQLLKRPELAVV 204

Query: 215 VILPDIISKSPLAPAIIQGDT 235
             LP        A A+     
Sbjct: 205 ERLPTEDR---YAMALRLNSP 222


>gi|77460513|ref|YP_350020.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas
           fluorescens Pf0-1]
 gi|77384516|gb|ABA76029.1| L-ornithine-binding protein / L-arginine-binding protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 257

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 85/265 (32%), Gaps = 24/265 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLVLLGALALSVLSLPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K Q++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCQWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTN 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M +   +   +++L G +I VQ G+  E    +             +   
Sbjct: 106 KYYNTPARLVMKEGTQVSEGLAELKGKNIGVQRGSIHERFAREVLAPLG--AEIKPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    +           A+ +G 
Sbjct: 164 NEIYLDVAAGRLDGTVADATLLNDGFLKTDAGKGFAFVGPAFTDVKYFGDGVGIAVRKG- 222

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
               + ++    A+    +    Q 
Sbjct: 223 DALKDKINTAIAAIRENGKYKAIQD 247


>gi|254251722|ref|ZP_04945040.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124894331|gb|EAY68211.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 22  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ DI+  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 79  ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKRVG 136

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++ H      + ++  +++     + R DA   D        L   
Sbjct: 137 VEQGSTQETYAKAYWEPHG--VTIVPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 194

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINKAL 235


>gi|225181290|ref|ZP_03734735.1| extracellular solute-binding protein family 3 [Dethiobacter
           alkaliphilus AHT 1]
 gi|225168070|gb|EEG76876.1| extracellular solute-binding protein family 3 [Dethiobacter
           alkaliphilus AHT 1]
          Length = 268

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 89/259 (34%), Gaps = 26/259 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI------------KKRGFLKCGINTGLVGFA 48
           M K  ++++  +++L     +   +   +             +    L  G N     F 
Sbjct: 1   MKKFKWLALCFVLVLALGVLAGCGNNEANNNENNNGNDNGDAEAAETLIMGTNAEFAPFE 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +  + ++ GFDVD  + ++  +     +++   +       A+ S+++D+       T 
Sbjct: 61  FINDDNEYDGFDVDMAKMIADELG---MELEIDNMAFDGLISAVLSERVDMAVAAMTITE 117

Query: 109 LREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
            R     + F       GQ  ++      I SV  L    S+ VQ GTT ++  +     
Sbjct: 118 ER--QEEVNFSDPYINAGQVIVVLEDNDEIQSVEDLQEDKSVAVQLGTTGDIEASRIVD- 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                + +  +++          R DA   D         T        ++ + +++   
Sbjct: 175 ---DSNIVRLQQINAAFMELETGRVDAVIVDNPVAQRYINTMG---SLKMVGEPLTEEYY 228

Query: 227 APAIIQGDTEWYNIVSWTH 245
             A+ + +TE    ++   
Sbjct: 229 GIAVNKDNTELLEQINQAL 247


>gi|254422605|ref|ZP_05036323.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
 gi|196190094|gb|EDX85058.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
          Length = 299

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 85/221 (38%), Gaps = 8/221 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           + L  I++ G +K  + +    F  V  + +  G+D+D  + ++  +  +   I  +   
Sbjct: 58  ATLEQIRESGQVKVAVPSDFPPFGFVNTSMEPIGYDIDMAKEIAKGLNAELEIIPVV--- 114

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   LQ+ ++D++  +      R+  L + F                  IS++  LS
Sbjct: 115 GGYRIPFLQTDRVDMIISSLGKNDERD--LIIDFSEPYAPFFSAIYGGPTADISTIEDLS 172

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G SI V  G+  +L ++              +       +A  + + DA       + A 
Sbjct: 173 GRSIGVAQGSLEDLEIS-SLTEDISNVDIKRYANNSLTASALVSGQVDAIATGN--VVAA 229

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           KL  D P   +    I+  SP    + +GDTE+ + ++   
Sbjct: 230 KLIRDNPGSEITSKFILKDSPCYVGVREGDTEFVDEINEII 270


>gi|171057833|ref|YP_001790182.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6]
 gi|170775278|gb|ACB33417.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii
           SP-6]
          Length = 283

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 9/220 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +     F      G+  GFD+D   A+++    +   ++++    +  F AL 
Sbjct: 48  KVYVVGTDAAYAPFELQNEKGEIVGFDIDVVTAIAAKAGIE---VKFVNTPWEGIFNALG 104

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
               D L  +   T  R+    + F    +   Q   +     ++  + L    + VQ G
Sbjct: 105 QGDRDALVSSITITEERK--QTMDFSAPYFDAQQLIAVKDTSKVAKFADLKKLKVGVQTG 162

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +  +      +    +   FE         ++   DA   D   +      N     
Sbjct: 163 TTGDEVVTKLLGKN--STNIKRFESTPLALKELQSGGVDAVVADNGVVIHYVANNPADKF 220

Query: 214 HVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             +  +          A+ +G+ E    ++    A + A+
Sbjct: 221 KTVADNTSFAPEQYGIAVKKGNAELLEKINKGL-ADIKAD 259


>gi|317152557|ref|YP_004120605.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942808|gb|ADU61859.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 261

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M        +  + +     +  A      L  +K  G +   ++ G   F     + + 
Sbjct: 1   MKTFLRSLAVLTVTVLLLGLAACADTETDSLQRVKNAGEISFAMSGGYPPFNFYSQDNEL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVD  R +++ +      ++ +          L+S   D +  +   T   +    +
Sbjct: 61  VGFDVDVAREVATRMG---LTLKPVTTEWSGIIEGLRSGVYDGILGSMAVTE--DRLKVV 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y+ G   ++     ++  + + G  + V  GTT     AD            ++
Sbjct: 116 NFSTPYYYSGAQLMVKSGSPLALPADIKGRIVGVVTGTTF----ADDAAKLGAG-EVKLY 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      +   D    D   +  +   N    + V L   +    +A A  + DT 
Sbjct: 171 KDDTQTLTELSSGVVDGVITDR--VVGVNAMNSGKFDIVPLGAPLRSEDIAVAFNKDDTT 228

Query: 237 WYNIVSWTHYAM 248
               V     AM
Sbjct: 229 LLAEVDRILAAM 240


>gi|212704998|ref|ZP_03313126.1| hypothetical protein DESPIG_03066 [Desulfovibrio piger ATCC 29098]
 gi|212671550|gb|EEB32033.1| hypothetical protein DESPIG_03066 [Desulfovibrio piger ATCC 29098]
          Length = 246

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 83/253 (32%), Gaps = 23/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   +++  L+++  +  +              L    N        +       G+ 
Sbjct: 1   MFRKLTLTLCALMMMCTSVAAE------------TLVVATNCTYPPMEFLNDKKVPNGYS 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           + +   +      +   ++   +     F  L +   D+L+ +T  T  R+      F  
Sbjct: 49  IAYATEVLKRAGYE---MELRDVAWDGIFAGLAAGNYDLLAASTTITPERQK--AFDFTE 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  +M K K I+S++ L G ++  Q G T  L L +     N+      ++ + 
Sbjct: 104 PYYGVVQAVVMPKGKKINSLADLKGLTVGSQIGITGVLVLQE----ANVGAKIREYDDIG 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  A R DA   D                +  I     +       + +G T+  N
Sbjct: 160 LAFEDLAAGRVDAVICDDPVAKYYANKRTDFAGKFGIAYQHNNPEYFGFCVRKGRTDMLN 219

Query: 240 IVSWTHYAMVTAE 252
            ++    A + A+
Sbjct: 220 RLNKAI-AEIKAD 231


>gi|312862681|ref|ZP_07722921.1| putative major cell-binding factor [Streptococcus vestibularis
           F0396]
 gi|311101541|gb|EFQ59744.1| putative major cell-binding factor [Streptococcus vestibularis
           F0396]
          Length = 277

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 101/254 (39%), Gaps = 21/254 (8%)

Query: 3   KDFFVSILCLIILFF----TSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA 52
           +   +S++  + +      +S +  +S L        I K+G L  G+   +  F    A
Sbjct: 8   RILAISVIAFVAVLLWNTKSSQADESSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYYSA 67

Query: 53  N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
               ++G ++D              K+ +  +  + R   + +  ID+L      T  R+
Sbjct: 68  KTNTYQGMEID---LAKKIAKKLKVKVNFTAVTPQTREALMDNGTIDMLIATYTITDERK 124

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF++  K G   +S L+G +I V  G++ +  + +Y  A+N+K+
Sbjct: 125 ASYAM--SNPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKTAVEEYASANNLKF 182

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +      E+  +  A+R DA+ GD S L   +    +     IL +         A  
Sbjct: 183 DYVQLGSYPELAVSLYAYRIDAFAGDKSILSGYESDKTK-----ILDEGFKTQEYGIASS 237

Query: 232 QGDTEWYNIVSWTH 245
           + + E  +  +   
Sbjct: 238 KSNQELIDYTNNLI 251


>gi|257884576|ref|ZP_05664229.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,501]
 gi|257887402|ref|ZP_05667055.1| extracellular solute-binding protein [Enterococcus faecium
           1,141,733]
 gi|257895894|ref|ZP_05675547.1| extracellular solute-binding protein [Enterococcus faecium Com12]
 gi|257898520|ref|ZP_05678173.1| extracellular solute-binding protein [Enterococcus faecium Com15]
 gi|293377066|ref|ZP_06623276.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium PC4.1]
 gi|257820414|gb|EEV47562.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,501]
 gi|257823456|gb|EEV50388.1| extracellular solute-binding protein [Enterococcus faecium
           1,141,733]
 gi|257832459|gb|EEV58880.1| extracellular solute-binding protein [Enterococcus faecium Com12]
 gi|257836432|gb|EEV61506.1| extracellular solute-binding protein [Enterococcus faecium Com15]
 gi|292644282|gb|EFF62382.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium PC4.1]
          Length = 278

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 77/255 (30%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    +++  +    ++  T A+        +++K+  L    +  L   +      +
Sbjct: 1   MKKKRLFALITSVFFILSACGTAAANQEDHSWSNVEKKKELVVATSGTLFPASYYNDQNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  + ++  +     KI +   N   +  ++   + D  + +   T  RE    
Sbjct: 61  LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKGESDFAANDFGITKEREKKFS 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L+      FD          GI S+  L G     +  T+         + H  K     
Sbjct: 118 LSEPFKYSFDSMIVRKKDDSGIHSLDDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               ++  +     R D    D                 ++     +++     + +G+ 
Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233

Query: 236 EWYNIVSWTHYAMVT 250
                +      M  
Sbjct: 234 ALKKKIDGVLKEMKE 248


>gi|240850320|ref|YP_002971713.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella grahamii as4aup]
 gi|240267443|gb|ACS51031.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella grahamii as4aup]
          Length = 250

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +I     + S N+           LK   +     F+ + +N + +GFD
Sbjct: 1   MK---LLAGALIISATLFTLSANSQT---------LKIASDASYPPFSYIDSNNELQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  + +     L +K+ D +  +   T  R     + F  
Sbjct: 49  IDISYALCKKMNVE---CTIVTQDFEGMIPGLLAKKYDAIVSSLSPTKER--LQKIDFTD 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I+ K  GI   S     G ++ VQ+ TT      D++ +   + +  ++  
Sbjct: 104 PYYNTVLAVIVTKNSGIKEISTQNFRGKNLGVQSNTTQAAYAEDHYAS--ERVNIKLYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E +    +HR D    D            +    ++     +K P+A A+ Q + +  
Sbjct: 162 AIEANRDLLSHRLDIIIFDKLKALNWLENEGKDCCILLGTLEETKFPVAIALRQNNNDLK 221

Query: 239 NIVSWTH 245
           N  +   
Sbjct: 222 NSFNKAI 228


>gi|159905831|ref|YP_001549493.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159887324|gb|ABX02261.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 254

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 99/256 (38%), Gaps = 13/256 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +   ++   LII  F+   ++  +  D  K G L  GI  GL        +G+ KG
Sbjct: 1   MKIPEILVITAAILIITSFSGCISSYGLESDTVKPGVLTVGITPGLPPLEYY-EDGELKG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  + ++  +     K+++   + +    AL + +ID +       +  E    + F
Sbjct: 60  YDIDLMKEIAHQMG---LKLEFKVYSYEGAEKALLNGEIDCIPSTA---VSPERKEKMDF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                       + ++     +  L+G ++ V   T +E     Y  +  +  +   ++ 
Sbjct: 114 SRAYIQTYMVIAVFERSSYHEIKDLNGKNVAVLKNTYSEDWADRYLGS--IDANIKPYDS 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           V+ + +  ++   DA   D   ++    T     +   + + I+ +  A A+ + +    
Sbjct: 172 VDVLMSDVQSGNLDAVVTD--QIHLDYYTKMNNVDSRAISEKITIAYWAIALKKDNKGLQ 229

Query: 239 NIVSWTHYAMVTAEEL 254
           N ++   + +   E L
Sbjct: 230 NKINDALFELEEDEAL 245


>gi|307299194|ref|ZP_07578995.1| extracellular solute-binding protein family 3 [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306914990|gb|EFN45376.1| extracellular solute-binding protein family 3 [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 240

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 73/208 (35%), Gaps = 11/208 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             G +     F  V  NG++ GFD+D  +A++  +     +I+   ++      AL S  
Sbjct: 24  VVGTSADFPPFEYV-ENGEFVGFDIDLIKAIAEEM---DFEIEIRDMSFDSLIAALASGN 79

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           IDI+      T  RE    ++F    +   Q  ++     ++        +I VQ GTT 
Sbjct: 80  IDIVISGMTITPEREEV--VSFSKPYWTADQSVVVRDDSELTVTVLFGKHNIGVQTGTTG 137

Query: 157 ELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +L + D      +       ++              DA   D     +            
Sbjct: 138 DLWVEDNLVKTKILTGDFKRYDTYVLAMTDLVNKNIDAIVLDAPVAESFAKVRP----VK 193

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           I+  I +      A+ + + +  N+++ 
Sbjct: 194 IVGVIKTYEDYGIAVNKSNKDLLNLINE 221


>gi|288561201|ref|YP_003424687.1| amino acid ABC transporter substrate-binding protein
           [Methanobrevibacter ruminantium M1]
 gi|288543911|gb|ADC47795.1| amino acid ABC transporter substrate-binding protein
           [Methanobrevibacter ruminantium M1]
          Length = 273

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53
           M +      + L +     +++        D    G         G N+    F     N
Sbjct: 1   MKRSIIFLTIILSLFLVIGYASAGLFDFSSDDAGSGENTDDVFVVGFNSQFPPFGYK-EN 59

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G++ GFD++  + ++         +    ++   +   L S ++D +          +  
Sbjct: 60  GEYTGFDIELAKEVARRNNWTFKPVPI--IDWNTKRFELDSNEVDCIWSEFTIDGRED-- 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               +    + + +  I+     I+ +  L G ++ VQ G++   T+             
Sbjct: 116 -DYTWSQPYFNNTKLVIVRGDSDINDLDDLKGKTLEVQQGSSILNTIEKNETLKRKFAKI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +  +       +  CD    D        L +++ ++  IL   IS      A  +G
Sbjct: 175 EQVDGYDTAFMDLESGVCDVIIIDSGL--GRYLVSEKHNDTKILNQTISNEKYGVAFEKG 232

Query: 234 DTEWYNIVSWTHYAM 248
           +TE  + V  T   M
Sbjct: 233 NTELRDKVQKTLDEM 247


>gi|206564458|ref|YP_002235221.1| putative periplasmic lysine-arginine-ornithine-binding protein
           [Burkholderia cenocepacia J2315]
 gi|198040498|emb|CAR56483.1| putative periplasmic lysine-arginine-ornithine-binding protein
           [Burkholderia cenocepacia J2315]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 90/255 (35%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ S  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGSAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++  +      AL++++ D +  +   T  R+  +   F  
Sbjct: 53  VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSA 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +   L G S+ V+ GT  E     Y+ +     + + ++  
Sbjct: 108 KLFNTPTRLVTKKGTGLMPTAESLKGKSVGVEQGTIQETYAKTYWASKG--VNVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233
           +++ A   + R D    D        L   R +            P          + + 
Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGK-DLDDPKTLGNGAGIGLRKE 224

Query: 234 DTEWYNIVSWTHYAM 248
           DT+    +     AM
Sbjct: 225 DTDLKAKIDGAIAAM 239


>gi|239813180|ref|YP_002942090.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239799757|gb|ACS16824.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 246

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 85/247 (34%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59
           M     +    L  L F  F+  A      + +G  L+   +        V  NG   GF
Sbjct: 1   MNTRRTLVAAALSSLAFFGFAATA------QAQGEPLRVATDATFPPMEFV-ENGKRTGF 53

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+   A+   +      I+++ ++ K     L SK+ D+       T  R     + F 
Sbjct: 54  DVELVEAIGKTLGRK---IEWIDIDFKGLVPGLISKRFDMAVSAIYITDERRKV--VDFT 108

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++      I + + ++G  + VQ GT +     + F     +   +  E+
Sbjct: 109 VPYYAGGLVVMVKDGNTAIKAPADINGKKVSVQVGTKSVAYTKEKFP----QVQLMEVEK 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E+       R DA      A Y    T        +LP+ I+      AI +   E  
Sbjct: 165 NQEMFNLVDIGRADAAVTGKPAAYQYVRTRGG---LKVLPEQITTEEYGMAIRKDTPELT 221

Query: 239 NIVSWTH 245
             V+   
Sbjct: 222 KAVNGAI 228


>gi|70733919|ref|YP_257559.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68348218|gb|AAY95824.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 265

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 83/230 (36%), Gaps = 14/230 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A  + D  KRG LK G++   + F      G+  GF+VD  +A++ ++      ++ 
Sbjct: 20  TAQAGAIDDAVKRGTLKVGMDPTYMPFEMTNKRGEIIGFEVDLLKAMAKSMGVK---LEM 76

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138
           +         AL + + D++      T  R  +L L F       GQ  ++ K     I 
Sbjct: 77  VSTGYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSEPFIVVGQTLLIRKDLEGTIK 134

Query: 139 SVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           S   L+     I  + GTT E+                 ++  +E        + DA+  
Sbjct: 135 SYKDLNSADYRITSKLGTTGEMVAKKLIAKAKYHG----YDNEQEAVLDVVNGKADAFIY 190

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D                 V L    +  PLA  + +GD +  N ++   +
Sbjct: 191 DAPYNVVAVNKVGNGK-LVFLDKPFTYEPLAFGLKKGDYDSINFINNFLH 239


>gi|261340703|ref|ZP_05968561.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Enterobacter cancerogenus ATCC 35316]
 gi|288317119|gb|EFC56057.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Enterobacter cancerogenus ATCC 35316]
          Length = 260

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L        ++ G +     F+   A G++ GFD
Sbjct: 1   MKKTVLALSL---LVGLSAAASSYAALPQ-----TVRIGTDATYAPFSSKDAKGEFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSE 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E      ++   +    + ++  
Sbjct: 108 KLYAADSRLIAAKGSPIQPTIDSLKGKHVGVLQGSTQEGYANANWREKGVD--VVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLTAGRLDAAFQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKAFT------ELRKDGT-YDKLAKKYFDFNV 257


>gi|83748399|ref|ZP_00945422.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum
           UW551]
 gi|207738969|ref|YP_002257362.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           IPO1609]
 gi|83724915|gb|EAP72070.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum
           UW551]
 gi|206592340|emb|CAQ59246.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum
           IPO1609]
          Length = 254

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 13/218 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +I++ G L          F     +    GF+++  +A+   +      I++  L+   
Sbjct: 26  EEIQQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               LQ  + D++  +   T  R     + F    Y  G   +      I + + L+G  
Sbjct: 82  LLAGLQQNRWDLVISSHGVTEERAK--AVDFTTPHYCSGSSIVAR-DPAIRTAADLTGKV 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ G+T    +    K          F +  +   A  + R DA+  D     AL   
Sbjct: 139 VAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FVALAAI 192

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P  ++ L   +    +A A+ +G+T      +   
Sbjct: 193 QSNPEANLKLGSPLFVERIAAAVAKGNTALAAHYNKAL 230


>gi|121606331|ref|YP_983660.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120595300|gb|ABM38739.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 285

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 62/217 (28%), Gaps = 7/217 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +     F      G+  GFD+D  +A +     +   ++++    +  F ++ 
Sbjct: 48  KVYVVGTDAAYAPFESQNEKGEIVGFDIDVVKAAAQKAGIE---VKFVNTPWEGIFNSVA 104

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
               D+L      T  R     L F    +   Q   +     I+    L    + VQ G
Sbjct: 105 QGDRDLLVSAITITPER--RQTLDFSAPYFDAQQLIAVKSDSKIAKFDDLKKLKVGVQNG 162

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +  +           +   FE              DA   D   +      N     
Sbjct: 163 TTGDEVITKL--QGKDSPNVKRFESTPLALKEMEGGGVDAVVADNGVVVHYVANNPGSKF 220

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             I     +      A+ +G+ E    ++     +  
Sbjct: 221 KTIADSTFAAEQYGIAVKKGNAELLEKINQGLAGIKE 257


>gi|331007213|ref|ZP_08330422.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989]
 gi|330418980|gb|EGG93437.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989]
          Length = 532

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 18/265 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M   F   ++     F  + + + +  L  IK RG +  G+      +A   A+G+  G 
Sbjct: 1   MIIRFSHLLILFSFFFTNALAASDSPRLDLIKSRGAVIVGVKNDYPPWAYYDASGNLVGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  + ++  +      ++   + +  R   L+   IDI+      T  R    G+   
Sbjct: 61  EVDLAQDIADRLG---VSLKLQAVTSSNRISQLEQGSIDIIIATMGDTAKRRQQTGII-E 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P  Y  G   ++HKK  + S ++L G S+C+   T     L + F        P  +E  
Sbjct: 117 PSYYSSGATILIHKKSPLKSWAELYGKSVCLTKNTYLNRDLIERF-----LLKPQKYEGT 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY- 238
            +  AA +  +C  +  D +AL    L   R  +     D I   P   A+ + + +   
Sbjct: 172 LDNMAALQFGKCSGWIYDDTAL-TRLLQEPRWQDFKAPLDSIMLIPWTLAVKKSEKDSTL 230

Query: 239 ------NIVSWTHYAMVTAEELGIT 257
                  ++ W     + A E    
Sbjct: 231 GLLVSDAVIDWHRTGKILALEEKWK 255


>gi|116254187|ref|YP_770025.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115258835|emb|CAK09941.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 265

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 90/260 (34%), Gaps = 12/260 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +  +   + +    + +  A  L DIK  G +  GI +    F+   A+   KG+D
Sbjct: 5   MKLRY-TATAAIAVFGILAGAAQADELADIKAAGEINIGIFSDFPPFSSASADMSIKGYD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +      +  + +  + R   L   ++D+L         +E +  + F  
Sbjct: 64  VDVAQKIADGLGVK---LNLVSVTGQNRIAYLNDDRVDLL---MSVGYSKERAEVIDFAA 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      +S    L+  S+ V  GT  + +L               FE   
Sbjct: 118 PYAPYYIAVIGPAALKVSGKEDLADKSVAVNRGTLEDTSLTAVAP---GSAAIQRFENYN 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  A+ + +             +    D          + S S +A  + +G+     +
Sbjct: 175 SVIQAFISGQTQLMVVGNDVGAQVLARQDELKPEQKFQLLSSPSHIA--LRKGEEGLKKV 232

Query: 241 VSWTHYAMVTAEELGITQKN 260
           V+ +  AM++   L  + K+
Sbjct: 233 VNDSVAAMISNGSLDASSKS 252


>gi|328950984|ref|YP_004368319.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451308|gb|AEB12209.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus
           hydrothermalis DSM 14884]
          Length = 254

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 14/235 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                +     L  I+  G +  G       F      G+  GFD++  +AL+  +    
Sbjct: 15  ASLGLAQRFRSLDQIQADGTIVIGTEGAFPPFNFFDE-GNLVGFDIEIGQALAERLGVKY 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
               +         +AL   + D +  +   T  R  +  + F    Y  G   +     
Sbjct: 74  E---WKAQAFDTLLIALNQGRFDFVIASHTITPER--AQAVDFTKPYYCTGNLIVAL-PG 127

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G  +  +L G  + VQ GTT                    ++   +        R DA+ 
Sbjct: 128 GPRTPEELKGKVVGVQVGTTYFEYAQTIEGIK----EIKTYQTNPDALQDLLNQRIDAWI 183

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D            +    + L D++ +  +  A+ +G+      ++     ++ 
Sbjct: 184 TDQF---TALEAMKQRDVELQLSDLLVREEIGIAVAKGNETLLAALNNALDEILA 235


>gi|319744949|gb|EFV97279.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus agalactiae ATCC 13813]
          Length = 261

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 72/242 (29%), Gaps = 12/242 (4%)

Query: 12  LIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           +IIL     S             +K   +  G +   V       +GD+ GFD+D   A+
Sbjct: 1   MIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGDYTGFDIDLANAV 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
                     +++ P+N   +   L +  ID++      T  R     +AF      + Q
Sbjct: 61  FKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--KVAFTNPYMNNHQ 115

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDA 184
             +      I+S+  + G  +  Q+G++         D  K        + ++   +   
Sbjct: 116 VIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKEAVQYDTFTQALI 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             + +R D    D                +  +              + D      ++  
Sbjct: 176 DLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARKVDRRLIEKINKA 235

Query: 245 HY 246
             
Sbjct: 236 FK 237


>gi|319777992|ref|YP_004134422.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317171711|gb|ADV15248.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 277

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 75/241 (31%), Gaps = 21/241 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +   ++L  +   G LK   +      + + A+ +  GFD+D  + +   I      +++
Sbjct: 23  AQAGAVLDRVVAAGTLKVATDANWAPQSFLNASNELDGFDIDVAKEIGKRIGVK---VEF 79

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +              + D+   +   T  R       F  + Y+      +HK     S+
Sbjct: 80  VTPGWDIITAGNWVGRWDMHVGSMTPTKKRAEI--FDFPAVYYYTPAAVAVHKDSKAKSL 137

Query: 141 SQLSGASICVQAGTTTELTLAD----------YFKAHNMKYHPIVFERVEEIDAAYRAH- 189
           S L+G  +     +T E                F+          +E         R   
Sbjct: 138 SDLNGKVVGATTTSTFEAYAKKDLTLDAAGAPPFEYKLNPKEVHSYENSTTAFDDLRVGD 197

Query: 190 --RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
             R DA      ++               + D +   PLA AI  GD E+   ++    A
Sbjct: 198 GVRLDAVVSSQPSIVD---AVKAGYPIRQIGDPVFYEPLAVAIEHGDPEFSARIADAVKA 254

Query: 248 M 248
           M
Sbjct: 255 M 255


>gi|328957593|ref|YP_004374979.1| high affinity arginine ABC transporter binding lipoprotein
           [Carnobacterium sp. 17-4]
 gi|328673917|gb|AEB29963.1| high affinity arginine ABC transporter binding lipoprotein
           [Carnobacterium sp. 17-4]
          Length = 507

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 95/257 (36%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASI-LGDIKKRGFLKCGINTGLVGFAE---VK 51
           M K+ F  I+  ++  F  F+     + A   L D++++G L  G +     +     V 
Sbjct: 17  MKKNSFYLIVLSLLTVFGLFAPVETVSAADTGLEDVQEKGTLVIGTSADFPPYEFHSTVD 76

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G D+   + ++  +  +   ++   +       AL+S+++D++      T  R+
Sbjct: 77  GKDTIVGMDISIAQKIAEDLGVE---LKIEDIGFDSLLPALESEKVDMVISGMSPTDERK 133

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F  + Y  GQ  ++        ++V  L+G  + VQ G+  E    +       
Sbjct: 134 K--SVEFSDVYYTGGQNIVVRDADKEIYTNVDDLTGMKVGVQTGSLQETLAKEQMP---- 187

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAP 228
               +   ++ ++  A + ++ +A   +  +  A    +D+         +       A 
Sbjct: 188 DSELLSLSKITDLILALKTNKIEAILMEKPSAEAYIGNDDQLVTFDGGFLLEDGEQGSAI 247

Query: 229 AIIQGDTEWYNIVSWTH 245
           A  +      + V+ + 
Sbjct: 248 AFKKDTQSLVDAVNASL 264


>gi|326561454|gb|EGE11804.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 46P47B1]
          Length = 265

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M    F  ++  I+  F+  + +       K  G  L+         F     +G   GF
Sbjct: 1   MKFKTF-GLMAAIVGTFSISACSGQNEQSTKASGDTLRIATEGTYAPFNYTNPDGSLGGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   AL + +    ++ Q +  +      AL++ + D +      T  R  S  + F 
Sbjct: 60  DVDIANALCNKM---QTECQIIAQDWDGIIPALKTGRFDAIVAAMSVTPER--SEQVDFS 114

Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              + +   F+  K       S   ++ A I  Q  T +   L   +        P +++
Sbjct: 115 EPYFVNSLVFLAKKGSNFDPSSTDAINNAKIVAQRSTISSQWLTQTYP----NSKPQLYD 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            ++         R DA   D         ++   +  +   DI     ++ A+ +G+T  
Sbjct: 171 TLDNAFIDLGNERADAMISDKLPALTWLSSDLGQNFEIKGGDININDKVSIAVDKGNTAL 230

Query: 238 YNIVSWTHYAM 248
               +    A+
Sbjct: 231 LQKFNEALAAI 241


>gi|311278681|ref|YP_003940912.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308747876|gb|ADO47628.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 260

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 23/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  LI +   SF+ + +          ++ G++     F     +G   GFD
Sbjct: 1   MKKQLIPLLFTLISVSGASFAGSIT---------EIRFGVDPTFPPFESKTTDGHIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++  N      AL++K+ D +      T  R+    L F  
Sbjct: 52  IDLGNAICQKL---QAKCSWVESNFDGIIPALKAKKFDAILSAMYVTEKRKE--QLTFSD 106

Query: 121 -ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I                +    L   +I V+ G+  E     Y++      + + ++  
Sbjct: 107 KIYSGPIFVVARKNTITATDAGALKNKTIGVEQGSVQETYANKYWRNAG--VNVVAYQGA 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           ++I     + R DA            L  ++  +   + + +    L     A  + + D
Sbjct: 165 DQIIPDLESGRIDAAALAGVMAEYSFLNKEQGKDFTFVGNALQDKTLFTNGDAIGLRKED 224

Query: 235 TEWYNIVSWTHYAMVTAE 252
           TE    ++    A + A+
Sbjct: 225 TELQQAINGAI-AQIIAD 241


>gi|330873260|gb|EGH07409.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 273

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 79/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++ +   + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   L+G  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNATDDRIHSAKDLTGKKVGLTSASSYESFLNKNLVIDGAEDKPLQYPFDD 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|86360923|ref|YP_472810.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86285025|gb|ABC94083.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 277

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 23/265 (8%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +      +   L I+     +   ++L  +     LK   +      + +    +  G
Sbjct: 1   MNRLTKMTAAAASLAIVLAAVPANAGAVLDRVMADKDLKVATDANWAPQSFMNDKNELDG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  + +   +      ++++            + + D+   +   T  R       F
Sbjct: 61  FDIDVAKDIGRRLGVK---VEFVTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEI--FDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-------ADYFKAHNMKY 171
             + Y+       HK    + +S L G  +   A +T E          A    A   ++
Sbjct: 116 PAVYYYTPAAVAAHKDSKATKLSDLDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEF 175

Query: 172 HPIVFERVE---EIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
            P   +            R     R DA    +    ++            + D +   P
Sbjct: 176 KPKEVKSYANSSTAFDDLRLGDGTRLDAVVSSLP---SILDAVKAGYPIKQIGDPVFYEP 232

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVT 250
           LA AI  GD E+ + ++    AM  
Sbjct: 233 LAVAIEHGDKEFNDKIAEAVKAMQA 257


>gi|227504864|ref|ZP_03934913.1| glutamate-binding protein GluB [Corynebacterium striatum ATCC 6940]
 gi|227198555|gb|EEI78603.1| glutamate-binding protein GluB [Corynebacterium striatum ATCC 6940]
          Length = 295

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 83/272 (30%), Gaps = 24/272 (8%)

Query: 7   VSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            S +        +   ++          L  I + G +  G      G    + +G   G
Sbjct: 13  TSAVLASGALLAACGGSSDSAPGEGEGLLAHI-ESGNVTLGTKFDQPGLGLREGDGSMSG 71

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            DVD        ++        KI++    + +R   +++ Q+D+++        R    
Sbjct: 72  LDVDVATYVVNHIAKEKGWAEPKIEWKETPSAQRETLIENGQVDMIAATYSINASRAE-- 129

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F        Q  ++      I  +  L G  +C   G+T    + +   +       
Sbjct: 130 KVNFGGPYLVTHQALLVSADNAEIKGLDGLDGKILCSVTGSTPAQKVKEALPS----VQL 185

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAI 230
             F+       A      DA T D + L      N+   + V L       +       +
Sbjct: 186 QEFDTYSSCVEALSQGTIDAMTTDATILNGYAAQNEGKFKVVELEKDGKPFTDEYYGIGL 245

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261
            + D E    ++     M ++ E   +   N+
Sbjct: 246 AKDDQEATEAINAALKEMHSSGEFDKLVSANL 277


>gi|161524065|ref|YP_001579077.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160341494|gb|ABX14580.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 258

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I        ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++K+ DI+  +   T  R     + F    Y      I      +  +V+ L G  + 
Sbjct: 77  ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETYAKTYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKIRINKAL 233


>gi|330816087|ref|YP_004359792.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia gladioli BSR3]
 gi|327368480|gb|AEA59836.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia gladioli BSR3]
          Length = 265

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 22/255 (8%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    +      +       T    +A+ L  I      + G+      F     +G   
Sbjct: 1   MKLNWRKMAAGAVATAAAMSTLSGASAADLKQI------RFGVEASYAPFEYKLPDGKLA 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   A+ + +     K  ++  +      ALQ+++ D ++ +   T  R+    +A
Sbjct: 55  GFDIDVGNAVCAKL---KVKCVWVENDFDGLIPALQARKFDAINSDMTITDQRKK--AIA 109

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y      I  K  G + + + L G  + V  GT  E      +         + +
Sbjct: 110 FTDPIYSIPNQLIAKKGSGLLPTPASLKGKRVGVLQGTIQESYAKARWAPAG--VEVVPY 167

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALY-ALKLTNDRPSEHVILPDIISKSPL----APAII 231
           +  +      ++ R DA   D  A                  P ++    L       + 
Sbjct: 168 QTQDLAYEDLKSGRLDATFQDSEAAAKGFLAKPQAAGFAFAGPQVVDAEILGSGVGFGLR 227

Query: 232 QGDTEWYNIVSWTHY 246
           + DT+  N ++    
Sbjct: 228 KNDTDLRNAINGALK 242


>gi|309784980|ref|ZP_07679613.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           dysenteriae 1617]
 gi|308927350|gb|EFP72824.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           dysenteriae 1617]
          Length = 260

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L++    + S+ A++         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKK--LILALSLLVGLSAAASSYAALPE------TVRIGTDTIYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANESWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|229589724|ref|YP_002871843.1| putative ABC transporter exported solute-binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229361590|emb|CAY48467.1| putative ABC transport system, exported solute-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 283

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 10/247 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
           K      L   +    S +   + L  I++R  +  G+      F  +    G+ +G++V
Sbjct: 8   KALASLCLAGALASGASLARADATLDKIEQRHVINIGVMLSGPPFGTIDPKTGEHQGYNV 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + ++ A+  + + +    + A  R   LQ  ++DIL  N  +T  R   L     P 
Sbjct: 68  ELAKGVAKALGVEANTVS---VLAPNRVQFLQQGKVDILIANMQFTEERGEILDYVPTP- 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               G   ++ K  GI+  + L G  +CV  G+     L + + A         F    E
Sbjct: 124 YEEVGGAALIRKGSGITQWADLKGKPVCVSQGSNFIKPLQETYGA-----QIKAFRSQSE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              + R + C A       ++AL    +     + LP  +  S     + +G+ +    +
Sbjct: 179 SLLSLRGNGCVAAVHVSPTMHALLSDAEWAGYEIPLPGDLIPSNSVIWLRKGEHDTQAKL 238

Query: 242 SWTHYAM 248
                  
Sbjct: 239 DAIVRDW 245


>gi|258654113|ref|YP_003203269.1| family 1 extracellular solute-binding protein [Nakamurella
           multipartita DSM 44233]
 gi|258557338|gb|ACV80280.1| extracellular solute-binding protein family 3 [Nakamurella
           multipartita DSM 44233]
          Length = 321

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 8/202 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  GI     G      +G + GFDV+  + ++  +      I ++   + ER   + 
Sbjct: 84  GKVTVGIKFDQPGLGLKNPDGSFSGFDVEVAKYVAGKLGVPEGGITFVESKSAEREGLID 143

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152
             ++D +      T  R+    + F    +   Q  ++      I+    ++G  +C   
Sbjct: 144 RGEVDYIVATYSITDARKE--KVNFAGPYFIAAQDLLVKSDNTDITGPEAMAGKILCSVT 201

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T+   + D + A         +    E   A R+   DA T D   L         P 
Sbjct: 202 GSTSAQKVKDNYAA---DVALQEYGTYTECVEALRSGAVDAVTTDNVILAGYAAQY--PG 256

Query: 213 EHVILPDIISKSPLAPAIIQGD 234
           E  ++    S       + +GD
Sbjct: 257 ELKVVGKGFSTENYGIGLKKGD 278


>gi|15600346|ref|NP_253840.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter periplasmic binding protein [Pseudomonas
           aeruginosa PAO1]
 gi|107104253|ref|ZP_01368171.1| hypothetical protein PaerPA_01005327 [Pseudomonas aeruginosa PACS2]
 gi|116053300|ref|YP_793624.1| putative periplasmic binding protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152987515|ref|YP_001351209.1| putative periplasmic binding protein [Pseudomonas aeruginosa PA7]
 gi|218894253|ref|YP_002443122.1| putative periplasmic binding protein [Pseudomonas aeruginosa
           LESB58]
 gi|254238144|ref|ZP_04931467.1| hypothetical protein PACG_04266 [Pseudomonas aeruginosa C3719]
 gi|254243966|ref|ZP_04937288.1| hypothetical protein PA2G_04796 [Pseudomonas aeruginosa 2192]
 gi|296392007|ref|ZP_06881482.1| putative periplasmic binding protein [Pseudomonas aeruginosa PAb1]
 gi|313110214|ref|ZP_07796111.1| putative ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas aeruginosa 39016]
 gi|9951454|gb|AAG08538.1|AE004928_4 amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter periplasmic binding protein [Pseudomonas
           aeruginosa PAO1]
 gi|115588521|gb|ABJ14536.1| putative ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170075|gb|EAZ55586.1| hypothetical protein PACG_04266 [Pseudomonas aeruginosa C3719]
 gi|126197344|gb|EAZ61407.1| hypothetical protein PA2G_04796 [Pseudomonas aeruginosa 2192]
 gi|150962673|gb|ABR84698.1| probable periplasmic binding protein [Pseudomonas aeruginosa PA7]
 gi|218774481|emb|CAW30298.1| probable periplasmic binding protein [Pseudomonas aeruginosa
           LESB58]
 gi|310882613|gb|EFQ41207.1| putative ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas aeruginosa 39016]
          Length = 250

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 9/205 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L+ G       F  + A+G   GFD+D  +AL + +    ++ + +  +      A
Sbjct: 23  AADKLRIGTEGAYPPFNGIDASGQAVGFDLDIGKALCAKM---KTECEVVTSDWDGIIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +K+ D +  +   T  R+    + F    Y +   F+  K     +    L G  I  
Sbjct: 80  LNAKKFDFIVASMSITDERK--QAVDFTDPYYTNKLQFVAPKSVDFKTDKDSLKGKVIGA 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  T     L D            +++  E       + R D    D    Y    ++  
Sbjct: 138 QRATIAGTWLEDNMA---DVVTIKLYDTQENAYLDLSSGRLDGVLADKFVQYDWLKSDAG 194

Query: 211 PSEHVILPDIISKSPLAPAIIQGDT 235
                    +     +  A+ +GD 
Sbjct: 195 KEFEFKGEPVFDNDKIGIAVRKGDP 219


>gi|308187461|ref|YP_003931592.1| ABC transport system, periplasmic solute-binding protein precursor
           [Pantoea vagans C9-1]
 gi|308057971|gb|ADO10143.1| Putative ABC transport system, periplasmic solute-binding protein
           precursor [Pantoea vagans C9-1]
          Length = 263

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 91/241 (37%), Gaps = 21/241 (8%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L + ++   +F+  A     I++   ++  ++     F      G   GFD+D   AL +
Sbjct: 12  LAVAVMAGCTFAAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCT 64

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    +K  ++         AL++++ D +  +   T  R     + F    Y      
Sbjct: 65  QM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTVPLYDTHTQL 119

Query: 130 IMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           I  K  GI  +V  L G ++ V+ GT  E      ++ +      + +    ++++   +
Sbjct: 120 IARKGAGILPTVESLKGKTVGVEQGTVQERYALAKWQPYG--VTVVPYGDQAQVESDLVS 177

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243
            R DA   D +      L + +  +   L   I + P+     A  + +GDTE    +  
Sbjct: 178 GRLDAVFTDAAQAAIGFLKHPQGKDF-ELAGPIIQDPIIGPGTAIGLRKGDTELKTALDN 236

Query: 244 T 244
            
Sbjct: 237 A 237


>gi|289804383|ref|ZP_06535012.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 200

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 75/215 (34%), Gaps = 16/215 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E    D ++   +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           + I +   A R DA   D  A     L      E+
Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEY 200


>gi|70729728|ref|YP_259467.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68344027|gb|AAY91633.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 262

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 11/227 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  I++   ++  ++     F+         GFD     AL+  +      +  +   
Sbjct: 29  DDLQSIRESREIRIAMSGQYSPFSFANEQNQIVGFDASISEALAQRLGVK---VSIVTTP 85

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                  L +K+ D +  +   T  R     + F    Y  G+  ++ +   I+S++ L 
Sbjct: 86  FDGIIAGLLAKKYDAIIASMTITPERLR--AVDFVGPYYHAGRTIVVKEDSPINSLADLK 143

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI-SALYA 203
             ++ V     T     D +           ++ + E+     A R DA   D    L A
Sbjct: 144 DVTVGV-----TLGDAHDKWARARGNLKVKTYKGLPEMLVDLEAGRLDALVMDSVPVLVA 198

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +K T  +               +  A+ + + E    +      M+ 
Sbjct: 199 VKETGQKVRIITPPDSDGGVEGMGIALRKNNPELKAAMQQALNDMLA 245


>gi|84393206|ref|ZP_00991969.1| cyclohexadienyl dehydratase precursor [Vibrio splendidus 12B01]
 gi|84376172|gb|EAP93057.1| cyclohexadienyl dehydratase precursor [Vibrio splendidus 12B01]
          Length = 254

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L   I    S    A  L DI+K G L+ G       F+       + G+D
Sbjct: 1   MKK---TSLLLASITLALSGVVQADQLEDIQKSGTLRVGTTGDYKPFSYFDGK-TYSGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   +Q +    K+    L S + DI        + R+++       
Sbjct: 57  IDVAKHVAEQLGVE---LQIVRTTWKDLLTDLDSDKYDIAMGGITRKMQRQLNAEQTQGY 113

Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +T+         K +  +S+    LS   + V  G T E+    +  A+        +E 
Sbjct: 114 MTFGKCFLVAKGKAEQYNSIEKVNLSSVRVGVNIGGTNEM----FADANLQDASFTRYEN 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             ++  A    + D    +       ++T++R  E        + S     I +G+    
Sbjct: 170 NLDVPQAVAEGKVDVMVTETPEGLFYQVTDER-LEAARCETPFTNSQFGYLIPKGEQRLL 228

Query: 239 NIVSWTHYAM 248
           N V++    M
Sbjct: 229 NTVNFIMDEM 238


>gi|254229406|ref|ZP_04922822.1| arginine-binding periplasmic protein 1 [Vibrio sp. Ex25]
 gi|262396866|ref|YP_003288719.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio sp. Ex25]
 gi|151938097|gb|EDN56939.1| arginine-binding periplasmic protein 1 [Vibrio sp. Ex25]
 gi|262340460|gb|ACY54254.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio sp. Ex25]
          Length = 247

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 84/258 (32%), Gaps = 21/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L      + +              +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +   +      AL+ K+ D      D T  R     + F  
Sbjct: 52  VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFTN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K+   +    L G  + VQ G+T +  L +           + +   +
Sbjct: 107 AYYENSAAFVSIKE-KAADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       D  +     +       +    A+ +G+ E  
Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221

Query: 239 NIVSWTHYAMVTAEELGI 256
           N ++     +    E  +
Sbjct: 222 NKLNTALKTVKANGEYDV 239


>gi|52425332|ref|YP_088469.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307384|gb|AAU37884.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 262

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 65/211 (30%), Gaps = 10/211 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K   +    +  +  T+ +  A  L   I  +G +  G       F    A+G   G+
Sbjct: 1   MFKKLVLLATGMFAVATTTQAVAADSLLDRINNKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      +++           L++ + DI++     T   E        
Sbjct: 61  DVEVTRAVADKLGVK---VEFKETAWDSMMAGLKAGRFDIVANQVALT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               + G    +                   Q+ T+    LA   +A       +  + +
Sbjct: 117 EPYSWSGAMMAVRADDDSIKTLDDIKDRKAAQSLTSNYGELAREKQAK-----IVPVDGL 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +     +  R D    D  A+      N  
Sbjct: 172 AQSLLVVQQKRADFTLNDSLAILDYLKKNPN 202


>gi|330877311|gb|EGH11460.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 260

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 87/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKSGVTTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ A   + R DA   D+       L +   +++     +   +  + +A  I QG+ E
Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKIAIGIAQGNKE 225

Query: 237 WYNIVSWTHYAM 248
              ++     AM
Sbjct: 226 LKALLDKGIKAM 237


>gi|291302343|ref|YP_003513621.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
 gi|290571563|gb|ADD44528.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
          Length = 315

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 75/221 (33%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD---DPSKIQYLPLN 84
           DI   G L  G             A G  +GFD +  R ++  IF    +   + ++   
Sbjct: 68  DILDSGRLTIGSKFDQPLTGLRDKATGRIEGFDAEIGRIITQRIFGKVAEGENLDFIETV 127

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   L+   +D++      T   E    + F    Y  GQ  +  K +GI  +  LS
Sbjct: 128 PANREKYLEDGTVDLVLATYTITP--ERKKAVTFAGPYYEAGQAIMTRKGEGIEDIKDLS 185

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              +C   GTT+   +  +    N+               A      DA + D   LY  
Sbjct: 186 KKKVCAAEGTTSLDNVEKHNPRANVS---KPMRNWSSCRQALLEKEYDAVSTDDVILYGF 242

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + PS+  I     +  P    + +G TE    ++ T 
Sbjct: 243 LS--EDPSKLEISKKTFTTEPYGIGLPKGSTELQKFINETL 281


>gi|82777721|ref|YP_404070.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           dysenteriae Sd197]
 gi|81241869|gb|ABB62579.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           dysenteriae Sd197]
          Length = 260

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L++    + S+ A++         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKK--LILALSLLVGLSAAASSYAALPE------TVRIGTDTIYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|330942301|gb|EGH44929.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 273

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 84/258 (32%), Gaps = 23/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++     + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R  S    F  
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKAR--SEVFNFPV 114

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----- 174
             Y      +++  +  I S   LSG  + + + ++ E  L         +  P+     
Sbjct: 115 EYYASPAVIVVNATEDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEEKPLQYPFE 174

Query: 175 -----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                 ++               R DA   +   L   K   D+     +  + + + P 
Sbjct: 175 DVQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPN 231

Query: 227 APAIIQGDTEWYNIVSWT 244
           + AI + D EW   V   
Sbjct: 232 SVAIEKDDPEWDAKVRQV 249


>gi|116255121|ref|YP_770955.1| putative exported solute-binding protein [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115259769|emb|CAK02861.1| putative exported solute-binding protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 279

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 88/276 (31%), Gaps = 12/276 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + I   + L   +      +   +K  G L          F  V ANG   G DVD
Sbjct: 2   KATHLGIFVALTLAQNAIGAEVPVTESVKSSGTLTIANGLDYAPFEFVDANGQPAGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
                +  I    +K+    +    +  +L + ++ +      +T+  +    + F    
Sbjct: 62  LAHEAAKLI---TAKLDLQRIPFASQIPSLSAGRVKVAWA--TFTVKEDRLKQVDFVTFL 116

Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGT----TTELTLADYFKAHNMKYHPIVFE 177
                  ++  KK  IS    L G  + VQ G+    TT+    D  K++  K   +++ 
Sbjct: 117 QSGTVAMVLPDKKDSISDAKSLCGKRVAVQTGSAADFTTDKLSEDCAKSNLPKIDKVIYP 176

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             ++   A    R DA   D S               V+ P +    PL  A+ +GD   
Sbjct: 177 EQKDTIQAVLTGRADARFDD-STAAGYYEQTSNGK-LVVAPGVYDVLPLGVAVQKGDKAS 234

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             ++      ++   +                   +
Sbjct: 235 AEMMQAIFQELIANGKYETVLDKYGMSLAAVKKSRI 270


>gi|300812584|ref|ZP_07093001.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496457|gb|EFK31562.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 500

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 91/264 (34%), Gaps = 26/264 (9%)

Query: 1   MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K      ++L L  LF  +             +++++  IKK G L  G++       
Sbjct: 1   MKKLIKIMTALLLLAGLFTAAIPAVDAASSKKVTSSTVMKKIKKSGKLVVGMSADYPPLE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
               V     + G DV+  + ++  +      ++   ++     +AL++ +ID++     
Sbjct: 61  FTKNVNGRNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117

Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R+    + F  I Y    D        K   +S +   G ++  Q G+    +L  
Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                 +K   +       +  A ++ + DA            +TND     V      +
Sbjct: 176 NAAKSGIKVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYVTNDTSLSLVKSSLSQA 232

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246
           +   A  + +G  +    ++ T  
Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256


>gi|189351174|ref|YP_001946802.1| polar amino acid transporter substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189335196|dbj|BAG44266.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 260

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I        ++  +      
Sbjct: 22  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++K+ DI+  +   T  R     + F    Y      I      +  +V+ L G  + 
Sbjct: 79  ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 136

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 137 VEQGSTQETYAKTYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 194

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKIRINKAL 235


>gi|269102811|ref|ZP_06155508.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162709|gb|EEZ41205.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 245

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 83/258 (32%), Gaps = 24/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++ L      +                LK  +      F  +  N   +GFD
Sbjct: 1   MKKIVLATLIGLASTHALAAEQ------------ELKFAMEATYAPFEYIDENNQIQGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     K  +          AL+ K+ D      D T  R     ++F  
Sbjct: 49  VDLANALCQQM---DVKCTFHNQAFDSLIPALKFKRYDAAISGIDITEAR--QQQVSFSE 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K   ++  + L+G  I VQ G+T +  L D           + +   +
Sbjct: 104 PYYDNAAAFVSLK-DKVADQAALTGKRIGVQNGSTHQSYLLDNM----SGVTAVPYSSYQ 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R DA  GD + +      +   +     I       +    A+ + + E  
Sbjct: 159 DAFIDMQNGRIDAVFGDTAVVAEWFKKDPNLAYVGKPITNQKYFGNGFGIAVNKSNQELV 218

Query: 239 NIVSWTHYAMVTAEELGI 256
           N ++     +    +  +
Sbjct: 219 NKLNTALKTVKANGQYQV 236


>gi|237736429|ref|ZP_04566910.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421471|gb|EEO36518.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 242

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 89/247 (36%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F  ++L  +  +   SF  +            L  G N     F  ++ NG+  GF
Sbjct: 1   MKKLFLKAVLVSMFAVSGLSFGAD-----------KLYVGTNAEFEPFEYLQ-NGEIVGF 48

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++ ++  +   I++  +       ALQ+K++D++      T  R+  +  +  
Sbjct: 49  DVDLMEEIAKSMGKE---IEWKNIAFDGLLPALQAKKLDVIIAGMTATEERKKFVNFSQT 105

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                +    +  K   + S  +L G  + V  G T ++ +++             +   
Sbjct: 106 Y-YESNQMMLVHEKNPVVKSFDELKGHDVGVVLGYTGDIAVSEI-----EGVKVHRYNAT 159

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +A + D    D     A       P E  ++   ++K   A A+ + D E   
Sbjct: 160 SEAIMALKAQKIDVVVLDSE--PAKNYAKQNP-ELKLINTDVAKEEYAIAVGKNDKELVE 216

Query: 240 IVSWTHY 246
            +     
Sbjct: 217 DIDKALT 223


>gi|218517221|ref|ZP_03514061.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
          Length = 261

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 11/231 (4%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
                         A+ L +IKK+G +  GI T    F+ + A+G  +G+D+D  + ++ 
Sbjct: 1   AIAFTGASHIRQAGAATLDEIKKKGTITFGIVTDQPPFSFINASGQNEGYDIDLSKLMAK 60

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +  +     Y+P+ +  R   L + ++D+L          + +  + +           
Sbjct: 61  ELGVEA---AYVPITSANRIPQLMTGKVDMLICVMGV--YPDRAKVVQYVAPYAEINAAI 115

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              K  G++ V +LSG SI V+ G++ +  + D             F+       A  + 
Sbjct: 116 YGPKDGGVTKVEELSGHSIAVEKGSSMDKAVTDAAPK---DATIQRFDDASSAVQALLSG 172

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           + +           ++          I+   +S      A+     E    
Sbjct: 173 QVEYLGSYSHQFGGVEKAAPGKYAQKIV---LSTEYEGIAVRPKSEELGKW 220


>gi|157369611|ref|YP_001477600.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157321375|gb|ABV40472.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 259

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 22/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     I    +L   S     +          L+ G+      F    A+G  +GFD+D
Sbjct: 2   KSLKTLIAAGCLLAAGSTLAAENT---------LRFGLEALYPPFESKSASGKLEGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+ +A      K  ++  +      AL++++ D ++   + T  R     + F    
Sbjct: 53  LGNAVCAAA---QLKCSWVETSFDSLIPALKARKFDAINSAMNVTDQR--RQAIDFTDSI 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y      I     G + + + L+G  + V  G+  E     ++    +    + ++   +
Sbjct: 108 YQVPNRLIAKADSGLLPNATSLAGKHVGVLQGSIQETYAKAHWAPQGVD--VVSYQDQNQ 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTE 236
                 A R DA      +  +  L +        + D +S        +A  + +GD  
Sbjct: 166 AYLDLTAGRLDATLVMAPSGQSGFLAHPDGKGFAFVGDAVSDDKILGEGIAFGLRKGDDA 225

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 226 LKKKLNEAI 234


>gi|83718624|ref|YP_441446.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|257139878|ref|ZP_05588140.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|83652449|gb|ABC36512.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
          Length = 363

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD    +   I    +K  + P +      
Sbjct: 125 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLANEVCKRI---NAKCTWTPQDLDGIIP 181

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + SV  L G  + 
Sbjct: 182 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLLPSVESLKGKRVG 239

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 240 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDEFQADYGFLRTP 297

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  N ++   
Sbjct: 298 RGKGFAWAG-PAVKDPKTLGDGTAMGLRKDDADLKNAINRAL 338


>gi|258405217|ref|YP_003197959.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257797444|gb|ACV68381.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 247

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 89/255 (34%), Gaps = 20/255 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +LCL  +  T+ S  A           L    +T  + F     +G++ GFD
Sbjct: 1   MRIVTRILLLCLAAVVMTAGSLQAKT---------LTVACDTNFMPFEFK-KDGEYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +  D    +  P++      ALQ+  +D           RE  +  +  P
Sbjct: 51  IDIWDTIAQDLGLDY---KLQPMDFNGIIPALQTGNVDAAIAAITIKSTREEVVDFSH-P 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +  +      I  +S L    +  + GTT+    ADY + +       +F  ++
Sbjct: 107 YYDAGLRVIVSADNNSIKGLSDLDDKIVATKIGTTS----ADYARENMDAKDVKLFPNID 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 R    DA   D  A+     T  + +  V+ P +        A  QG ++    
Sbjct: 163 AAYMELRTGGADAVLFDAPAVMYYANTAGKGAVKVVGP-LYQGQSYGIAFPQG-SDLREK 220

Query: 241 VSWTHYAMVTAEELG 255
           V+     M+ + E  
Sbjct: 221 VNIALLKMIESGEYA 235


>gi|261400966|ref|ZP_05987091.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria lactamica ATCC 23970]
 gi|296313787|ref|ZP_06863728.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria polysaccharea ATCC 43768]
 gi|269209074|gb|EEZ75529.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria lactamica ATCC 23970]
 gi|296839609|gb|EFH23547.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria polysaccharea ATCC 43768]
 gi|309378375|emb|CBX23021.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 268

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K +SS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252


>gi|24113681|ref|NP_708191.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella flexneri 2a str. 301]
 gi|24052749|gb|AAN43898.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella flexneri 2a str. 301]
          Length = 264

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 16/240 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +FS+  + L  I +   ++ G +     F    + G+  GFD++  + L   I    ++ 
Sbjct: 13  AFSSATAALAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIELAKELCKRI---NTQC 67

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++         +L++K+ID +  +   T  R     +AF    Y      ++ K   I 
Sbjct: 68  TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125

Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L G  + V  GTT E    +++    +    + ++  + I +   A R DA   D
Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252
             A     L      ++      +    L        + + D E    ++   +A + A+
Sbjct: 184 EVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242


>gi|317491410|ref|ZP_07949846.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920957|gb|EFV42280.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 243

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    + FT+ +              ++   +     F  + +N    GFD
Sbjct: 1   MKKLMVCALLA--GMSFTATAAE-----------TIRFASSATYPPFESMDSNNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R+  +   F  
Sbjct: 48  MDLAKALCKQM---QATCTFTNQAFDSLIPALKFKRYDAVISGMDITPERQKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     + + + G  + ++ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIIIAEKG-KYKTFADMKGLRVGMENGTTHQKYLQDKHPE----IKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + +     +N         +       + L  A+   +T   
Sbjct: 158 NAILDLKSGRLDGVFGDTAVVNEWLKSNPNLAAVGDHVTDAQYFGTGLGIAVRPENTALL 217

Query: 239 NIVSWTH 245
             ++   
Sbjct: 218 AQLNKAL 224


>gi|293392787|ref|ZP_06637105.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
 gi|291424646|gb|EFE97857.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
          Length = 256

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 81/246 (32%), Gaps = 16/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +   CL        +   +             G       F    ++   +GFD
Sbjct: 1   MFKRLVLIGACLAASLSAGSAVAETTY---------VVGSGGTYRPFEFENSSKQLEGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +  +I+ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 52  IDIIKAVAKA---EGFQIKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   + S++ L    + V   +T ++ ++D    +        F+   
Sbjct: 107 PYFPAEQAIVVPKTSTVDSIAALKSLKVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+        T+      ++      +     A+ +G+ E  + 
Sbjct: 165 LMLQELFEDGISAAVGDVGVAKFYIKTHPEKQFKLVTDAKFQRQYFGIAVAKGNVELRDR 224

Query: 241 VSWTHY 246
           ++    
Sbjct: 225 INAGLK 230


>gi|29831920|ref|NP_826554.1| amino acid ABC transporter solute-binding protein [Streptomyces
           avermitilis MA-4680]
 gi|29609037|dbj|BAC73089.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 335

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 15/233 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-----WKGFDVDFCRALSSAIFDDPS- 76
           + + +  IKKRG+L  G++     +     N        +GFD+D    ++  I   P+ 
Sbjct: 76  SGAAIKAIKKRGYLSVGVDQNSYRWGYRDPNSTKKGSDLEGFDIDLAHRIADEILGKPNA 135

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +++  +   +R  A++S Q+D++ R    T  R   +   F    +  GQ  +  KK G
Sbjct: 136 DVRFHAIPTNQRIEAIRSGQVDMVVRTMTITCKRLADVA--FSDPYFRTGQQVLAPKKSG 193

Query: 137 ISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEIDAAYRAHRCD 192
           I+     L+   IC  A +T   TL    KA  +              +     +  + D
Sbjct: 194 ITGYDKSLAHKRICTAASSTAFDTLTADRKAGRLVVSARMSEPVPNQLDCLVRLQLGQVD 253

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A   D +   +    +       +     +      A+     +    V+   
Sbjct: 254 AVVTDGALAASQAAQDP---TVELKGAAFTDEYYGVAMKLDAKDLVRRVNQVL 303


>gi|49089440|gb|AAT51683.1| PA5153 [synthetic construct]
          Length = 251

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 9/205 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L+ G       F  + A+G   GFD+D  +AL + +    ++ + +  +      A
Sbjct: 23  AADKLRIGTEGAYPPFNGIDASGQAVGFDLDIGKALCAKM---KTECEVVTSDWDGIIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +K+ D +  +   T  R+    + F    Y +   F+  K     +    L G  I  
Sbjct: 80  LNAKKFDFIVASMSITDERK--QAVDFTDPYYTNKLQFVAPKSVDFKTDKDSLKGKVIGA 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  T     L D            +++  E       + R D    D    Y    ++  
Sbjct: 138 QRATIAGTWLEDNMA---DVVTIKLYDTQENAYLDLSSGRLDGVLADKFVQYDWLKSDAG 194

Query: 211 PSEHVILPDIISKSPLAPAIIQGDT 235
                    +     +  A+ +GD 
Sbjct: 195 KEFEFKGEPVFDNDKIGIAVRKGDP 219


>gi|77456539|ref|YP_346044.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77380542|gb|ABA72055.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 248

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 77/249 (30%), Gaps = 27/249 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK  F++    +     + +              LK GI      F    A+G+  GFD 
Sbjct: 4   YKKVFLAAAVTLAFSAGAMAE------------TLKMGIEAAYPPFNNKDASGNVVGFDK 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +      +  +      AL +K+ D L  +   T  R+    + F   
Sbjct: 52  DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLISSMSITDERKG--AVDFTDP 106

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y +   FI  K K   +    L G  I  Q  T     + D            +++  E
Sbjct: 107 YYSNKLQFIAPKDKEFKTDKDSLKGKVIGAQRATLAGTFMEDNMP----GVEVKLYDTQE 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + R D    D    Y    ++   +       +     +  A+ +GD      
Sbjct: 163 NAYLDLISGRLDGILADKYVNYEWLKSDAGKAYEFKGDPVEESDKIGIAVRKGDP----- 217

Query: 241 VSWTHYAMV 249
           +     A +
Sbjct: 218 IREKLNAAL 226


>gi|225022582|ref|ZP_03711774.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944650|gb|EEG25859.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 333

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +I  RG L  GI+      +      G+ +GF+VD  + +++ IF +P+KI++  +++  
Sbjct: 81  EIISRGRLIVGIDQSQNLLSFRNTITGELQGFEVDIAKEIAADIFGNPTKIEFRYVDSAN 140

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              +L+S QID+  R    T  R+    + F           ++HK   I  +S++ G  
Sbjct: 141 WIDSLESHQIDMAIRTLSIT--RDRQDQVFFSTPYLKGSTKILVHKSSAIKGISEIGGRP 198

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV + +T      +           +V     +     + ++  A   D   L  +   
Sbjct: 199 VCVTSQSTGIHYARNLAP----TSDLVVVRSSADCLIVMQQNQASAVITDDVILSGMSAQ 254

Query: 208 NDRPSEHVILPDIISKSPLAPA-----IIQGDTEWYNIVSWTH 245
           +       I    +S      A                ++ T 
Sbjct: 255 DP---FTTIEGGSLSNENYGIATAKPGYRHHTDGLIRQINATL 294


>gi|118593287|ref|ZP_01550672.1| probable amino acid ABC transporter, substrate-binding protein
           [Stappia aggregata IAM 12614]
 gi|118434178|gb|EAV40834.1| probable amino acid ABC transporter, substrate-binding protein
           [Stappia aggregata IAM 12614]
          Length = 257

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 16/252 (6%)

Query: 4   DFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +F +I    +L     S +     L  IK  G LK G       F      G   GFDV
Sbjct: 2   SWFKAIATAAVLQALTFSAAQAGENLDAIKSAGVLKIGTEGTYAPFTFHDGEGKLVGFDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++  +        ++          L  ++ D++      T  R+      F   
Sbjct: 62  EIGEAVAEKLGVKAE---FIEGKWDGLIAGLDVERYDVVINQVGITDARK--QKYDFSDP 116

Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   I+      I     L G     Q+ T+    LA    A       +  +  +
Sbjct: 117 YIASKAVLIVRDSNDDIKGFEDLDGKK-AAQSLTSNFGKLAVEAGA-----ELVGTDGFD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        R DA   D  +    K          ++ +  +       + +GD E    
Sbjct: 171 QSIQLVLTRRADATINDSLSYLDFKKQKPDAPV-KVVAEKANADHSGILVRKGDPELVAA 229

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 230 LNEAL-ADIKAD 240


>gi|83950196|ref|ZP_00958929.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius nubinhibens ISM]
 gi|83838095|gb|EAP77391.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius nubinhibens ISM]
          Length = 269

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 85/231 (36%), Gaps = 12/231 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   I    I+ F +    A  L +IK  G +  G+      +  + ++G+  G +
Sbjct: 1   MKHAWKTVIASAAIVAFGTT-AQADQLQEIKDEGKIVVGVKQDYKPWGYLTSDGELAGLE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R ++  +  +   ++ +P+ A  R   L   +ID++         R   +G+    
Sbjct: 60  IDLARDVAERLGVE---VELVPVVASNRMEFLSQGRIDLIIATMGDNPKRREVVGMIEPN 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                       K  G+     L G  +C   G+     +   +  +      + F  + 
Sbjct: 117 YYAGGTNVLA-PKAVGLKEWEDLRGKDVCALQGSYYNKRVTQLYGPN-----LVAFAGIP 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           E+ +A +   C  +  D + + +   ++++ +E  +        P A +I 
Sbjct: 171 EVTSALKNGSCIGFLYDNTWIESQLASDEQWAEFEMPFPTE--DPQAWSIA 219


>gi|219669813|ref|YP_002460248.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
 gi|219540073|gb|ACL21812.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
          Length = 281

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 90/254 (35%), Gaps = 20/254 (7%)

Query: 1   MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K++           SIL          +  +    D      L  G+      F    
Sbjct: 1   MKKNYLLLLTAALLISSILLGCSKSQAPANQPSQAGNDATAAQELIVGMELAYPPFEMTD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+  G  VDF + L +A+      ++   +       ALQ+K+ID++  +   T  R+
Sbjct: 61  EKGNPTGVSVDFAKDLGAALG---RPVKIENMAFSGLIPALQTKKIDMVISSMTITDERK 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169
            ++   F           ++++K  +  V  L   G  + V+ GTT  +       A+  
Sbjct: 118 KTVA--FSDPYAKAWLALLINEKSSVKEVKDLNAPGRKVAVKNGTTGHIYAQ----ANLP 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           +   +VFE+           + DA+  D  ++Y     N++ +   + P          A
Sbjct: 172 QAEIMVFEKESACILEVGQGKADAFIYDTLSIYRAWKQNEKTTRANLNPFQDKVEEWGVA 231

Query: 230 IIQGDTEWYNIVSW 243
           + Q D E    V+ 
Sbjct: 232 LRQDDKELTAKVNQ 245


>gi|330446185|ref|ZP_08309837.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490376|dbj|GAA04334.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 242

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 83/248 (33%), Gaps = 28/248 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+ L      +                +K  +      F  +  N   +GFD
Sbjct: 1   MNKILLATIIGLASSQAVAQ--------------EIKFAMEATYAPFEYMDENNQIQGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +   +      AL+ K+ D      D T  R     ++F  
Sbjct: 47  VDIANALCKEL---DATCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--QQQVSFSQ 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +  GFI  K   ++ +  L G  + VQ G+T +  L D           + +   +
Sbjct: 102 PYYDNAAGFISIKG-KVADIDALKGKRVGVQNGSTHQSYLTDQMP----NVTTVPYNSYQ 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEW 237
           +     +  R DA  GD + +    L  D    +V  P    K   +    A+ + + E 
Sbjct: 157 DAFIDMQNGRIDAVFGDTAVVAEW-LKKDDKLAYVGKPVTNPKYFGNGFGIAVNKNNQEL 215

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 216 LKQLNTAL 223


>gi|206578400|ref|YP_002239863.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|238893545|ref|YP_002918279.1| putative extracellular solute-binding protein [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288936703|ref|YP_003440762.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290510241|ref|ZP_06549611.1| lysine/arginine/ornithine transport system substrate-binding
           protein [Klebsiella sp. 1_1_55]
 gi|329999458|ref|ZP_08303432.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Klebsiella sp. MS 92-3]
 gi|206567458|gb|ACI09234.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|238545861|dbj|BAH62212.1| putative bacterial extracellular solute-binding protein [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891412|gb|ADC59730.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289776957|gb|EFD84955.1| lysine/arginine/ornithine transport system substrate-binding
           protein [Klebsiella sp. 1_1_55]
 gi|328538321|gb|EGF64459.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Klebsiella sp. MS 92-3]
          Length = 258

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 81/258 (31%), Gaps = 25/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  +      +                ++ G++     F      G   GFD
Sbjct: 1   MKKSLLLWLALMASTSALAEGG-----------KEIRFGVDPTFAPFEWKDPQGKLAGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++  N      AL++++ D +      T  R+  +   F  
Sbjct: 50  IDLGNAICQQL---QAKCVWVESNFDGIIPALKARKFDAILSGMYMTEKRKAQIA--FSD 104

Query: 121 I-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                             ++  QL G +I V+ G+  E  +  +++   +  + + ++  
Sbjct: 105 KLYNGPVFLVARKNTLQGNTPEQLKGKTIGVEQGSAQETYVNQHWRPQGI--NIVAYQGA 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     + R D             L   +  E   +   +    L     A  + + D
Sbjct: 163 DSVVRDLESGRIDGAVLSGMMADYSFLQQPQGKEFAFVGGHLQDDTLFGAGAAIGLRKDD 222

Query: 235 TEWYNIVSWTHYAMVTAE 252
                 ++    A + A+
Sbjct: 223 EALRQEINGAI-AKILAD 239


>gi|293570940|ref|ZP_06681985.1| L-cystine-binding protein TcyA [Enterococcus faecium E980]
 gi|291609003|gb|EFF38280.1| L-cystine-binding protein TcyA [Enterococcus faecium E980]
          Length = 278

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 80/255 (31%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    +++       ++  T A+        +++K+  L    +  L   +      +
Sbjct: 1   MKKKRLFALITSTFFILSACGTAAANQEDHSWSNVEKKKELVVATSGTLFPASYYNDQNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  + ++  +     K+ +   N   +  ++   + D  + +   T  RE    
Sbjct: 61  LVGYDVDLAKEVAKRL---NVKVSFKEYNVDGQITSVSKGESDFAANDFGITKEREKKFS 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L+      FD          GI S+  L G         T+ + LA+ + A  + Y    
Sbjct: 118 LSEPFKYSFDSMIVRKKDDSGIHSLDDLKGKK-AAGEPNTSYMRLAEKYGAKLVTYD--- 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               ++  +     R D    D                 ++     +++     + +G+ 
Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233

Query: 236 EWYNIVSWTHYAMVT 250
                +      M  
Sbjct: 234 ALKKKIDGVLKEMKE 248


>gi|316983779|gb|EFV62760.1| L-cystine-binding protein tcyA [Neisseria meningitidis H44/76]
 gi|325140059|gb|EGC62588.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis CU385]
 gi|325200527|gb|ADY95982.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis H44/76]
          Length = 274

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   ++     I S++ + G        +          KA
Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVVRNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|319410153|emb|CBY90489.1| putative amino acid ABC transporter binding lipoprotein [Neisseria
           meningitidis WUE 2594]
 gi|325203873|gb|ADY99326.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis M01-240355]
          Length = 274

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|308388973|gb|ADO31293.1| putative amino acid permease substrate-binding protein [Neisseria
           meningitidis alpha710]
 gi|325127934|gb|EGC50837.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis N1568]
 gi|325144175|gb|EGC66482.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis M01-240013]
          Length = 274

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|77459080|ref|YP_348586.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77383083|gb|ABA74596.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 274

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 80/255 (31%), Gaps = 15/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M    FV    L  L     +  A +   IK++G +   I                  G 
Sbjct: 1   MKN--FVIPAVLTSLMSCGVAVAAELPASIKEKGEIVVAIMPNYPPMDFKDPATNKLTGL 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D   AL+  +      I++     ++   AL ++++D++      T  R+    + F 
Sbjct: 59  DYDLGNALAERLGVK---IKWQETGFEQMINALTTERVDMVLSGMTDTAERQA--SVTFV 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174
                  Q + + K    + +  L G  +     TT    +A + K +         + I
Sbjct: 114 DYFTSGPQFYTLQKNATTNEIIDLCGKKVGTSRRTTFPAEIAAWSKENCEAAGKPAINVI 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   +  A  R  R DA       L  LK        +  +   IS       + +  
Sbjct: 174 GTEGSADARAQLRQSRIDAAMQGSETLSYLKTQEKD--MYKTVGQPISVQFTGLGVSKKK 231

Query: 235 TEWYNIVSWTHYAMV 249
            E    V     +MV
Sbjct: 232 PELSEAVKVALQSMV 246


>gi|157376892|ref|YP_001475492.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
 gi|157319266|gb|ABV38364.1| extracellular solute-binding protein, family 3 [Shewanella
           sediminis HAW-EB3]
          Length = 245

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 28/260 (10%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDW 56
           M K      S+    +L  T            K    L  G N     F  V   +  + 
Sbjct: 1   MKKSILCLGSLGLAGVLMLTGCG---------KSDDVLVVGTNASFPPFEYVGGVSGDEI 51

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD+D  R ++         ++   +      +AL + ++D+++     T  R+    +
Sbjct: 52  KGFDIDLARQIAKDAGK---TLKVENMKFDSLIVALNAGKVDLIASGMTITAERQA--SV 106

Query: 117 AFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    Y       +      I SV  L G  I VQ G+T +        A +       
Sbjct: 107 NFSDPYYEATQVVLVNRDNTSIKSVDDLKGKHIAVQLGSTGD------IMAKSYSQEVTA 160

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    E     +  + D    D     +    N       ++           A+ +   
Sbjct: 161 FNTGFEAIMELKNAKVDLVLFDSEPAASFLDKNPG---LKMVELDFDPEFYGFAVTKEKV 217

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E  + ++ T   M    E  
Sbjct: 218 ELLHSINSTLTTMKHNGEYD 237


>gi|149191815|ref|ZP_01870052.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
 gi|148834333|gb|EDL51333.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
          Length = 230

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 14/218 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ GI      F+  +A+G  KGFDVD   AL   +    +K   +P +      +L ++
Sbjct: 1   MRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEL---KAKCVIVPQDWDGIIPSLLAR 57

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D +      T  R+    + F          FI  K  G+     L+GA I VQ  TT
Sbjct: 58  KYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLNGAKIGVQRATT 114

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +  L D +     +   + +   +E        R  A  GD SAL    +  D    + 
Sbjct: 115 HDKYLTDNY---GDQVEIVRYGSFDEAYLDLANGRIVAVLGDASALEEGVINKDGGDAYE 171

Query: 216 ILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
            +   ++        +  A+ + D +    +     ++
Sbjct: 172 FVGPSLTDPKWFGEGMGIAVRKQDKDLTKQLDAAIKSL 209


>gi|289627331|ref|ZP_06460285.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|330870383|gb|EGH05092.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 254

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 79/255 (30%), Gaps = 27/255 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK   +     +    ++F+              +K GI      F    A+G   GFD 
Sbjct: 4   YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +AL + +  +   +     +      AL + + D L  +   T  R+    + F   
Sbjct: 52  EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106

Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            Y +   FI  K           +   L+G S+  Q  T     L D            +
Sbjct: 107 YYSNKLQFIAPKTSSFDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++  E       + R DA   D    +    +    +       ++    +  A+ +GD 
Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222

Query: 236 EWYNIVSWTHYAMVT 250
                ++     ++ 
Sbjct: 223 ALRERLNAALKEIIA 237


>gi|291087463|ref|ZP_06346539.2| amino acid ABC transporter substrate-binding protein [Clostridium
           sp. M62/1]
 gi|291075062|gb|EFE12426.1| amino acid ABC transporter substrate-binding protein [Clostridium
           sp. M62/1]
          Length = 287

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 14/212 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G N     +     +    G DV+   A+   +  D   +Q   +       AL 
Sbjct: 70  GTLIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALV 125

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S ++D ++     T  RE    + F        Q  I+ +   I+SV  L+G  + VQ G
Sbjct: 126 SDKVDFVAAGMTVTPDREA--SVNFTDTYATAAQVIIVKEGSDIASVDDLAGKVVGVQLG 183

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +L +++             + +  E   +    + DA   D +        ++    
Sbjct: 184 TTGDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDNAPAKNFVAQDEG--- 235

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            VIL + +S    A A+ + +TE    ++   
Sbjct: 236 LVILEEALSSEDYAMAVNKDNTELLEQINGAI 267


>gi|30063735|ref|NP_837906.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella flexneri 2a str. 2457T]
 gi|110806272|ref|YP_689792.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella flexneri 5 str. 8401]
 gi|30041990|gb|AAP17716.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella flexneri 2a str. 2457T]
 gi|110615820|gb|ABF04487.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella flexneri 5 str. 8401]
 gi|281601750|gb|ADA74734.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella flexneri 2002017]
 gi|313651133|gb|EFS15532.1| histidine-binding periplasmic protein [Shigella flexneri 2a str.
           2457T]
          Length = 260

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 22/261 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +FS+  + L  I +   ++ G +     F    + G+  GFD++  + L   I    ++ 
Sbjct: 13  AFSSATAALAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIELAKELCKRI---NTQC 67

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++         +L++K+ID +  +   T  R     +AF    Y      ++ K   I 
Sbjct: 68  TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125

Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L G  + V  GTT E    +++    +    + ++  + I +   A R DA   D
Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252
             A     L      ++      +    L        + + D E    ++   +A + A+
Sbjct: 184 EVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242

Query: 253 ELGITQKNINQVSKDTTNPDV 273
                     +++K   + DV
Sbjct: 243 ------GTYEKLAKKYFDFDV 257


>gi|78061080|ref|YP_370988.1| lysine/arginine/ornithine  ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. 383]
 gi|77968965|gb|ABB10344.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 260

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ +  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGTAYA------KDWTTVRFGVDASYPPFESKGADGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++  +      AL++++ D +  +   T  R+  +   F  
Sbjct: 53  VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSA 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +   L G S+ V+ GT  E     Y+ +     + + ++  
Sbjct: 108 KLFNTPTRLVTKKGAGLMPTAESLKGKSVGVEQGTIQETYAKTYWASKG--VNVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +++ A   + R D    D        L   R +        +             + + D
Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGKDLDDPKTLGEGAGIGLRKED 225

Query: 235 TEWYNIVSWTHYAM 248
           T+    +      M
Sbjct: 226 TDLKAKIDGAIAGM 239


>gi|66044227|ref|YP_234068.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254934|gb|AAY36030.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 273

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++     + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAEDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|254250731|ref|ZP_04944050.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124879865|gb|EAY67221.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 320

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 85/245 (34%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + +  ++    +I  F +   +A  L  I K G L+  +      F  V  +   +G+D
Sbjct: 62  RRTWLAALFAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 121

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+ ++      ++ +P+N+  R   L + ++D++  +   T  RE    + F  
Sbjct: 122 IDMAGLLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 176

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 QG        +S+ + L+G ++    G   E+ L+              FE   
Sbjct: 177 AYAPYFQGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 232

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P     +  +I  SP    + + +      
Sbjct: 233 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 290

Query: 241 VSWTH 245
           +    
Sbjct: 291 IDDAI 295


>gi|241764991|ref|ZP_04762988.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241365425|gb|EER60212.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 300

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 88/232 (37%), Gaps = 9/232 (3%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
           F +++    +   +   +++    IK+ G L+ G       F+ +   +G  +GFD    
Sbjct: 34  FDALIAQGPVADAATIASSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDAGLA 93

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L+  I  D  K Q+  + +  R   L + Q+D++      T  R     ++F    Y 
Sbjct: 94  QLLTRYILGDGGKYQFTQVTSSTREQVLINDQVDMVFATYSITPARAE--KISFAGPYYT 151

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              G ++      I S + L+G  +  QAG+T    LA Y            F+  +E  
Sbjct: 152 SQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEAL 207

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            A R  R DAY  D + L    L+       +       + P    + +G  
Sbjct: 208 DALRQGRVDAYITDHTLLL-NALSLGTGDAKLAGAPFGLQDPYGVGLPKGSD 258


>gi|297590597|ref|ZP_06949235.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|297575483|gb|EFH94199.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
          Length = 485

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L  ++         +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPAAYAEQDQKWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNDYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKIEGVVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|91787395|ref|YP_548347.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91696620|gb|ABE43449.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 265

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 14/252 (5%)

Query: 1   MYKDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M      ++  L         +        L  I  +  +  G+ +    +  + ++   
Sbjct: 1   MKLKALSTLAGLFASTVLTLVSPAHAADDSLTSIMAKKSIALGVASDFPPYGFMGSDFKL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DV   + ++  +        ++P++   R   LQ+K+ID++         RE    +
Sbjct: 61  TGVDVATAQLIADKLGVKAE---FVPVSTPNRIPYLQTKKIDLIVSALGKNAEREKV--I 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F        Q     K   I S   L+G +I V  GT  +  L             + F
Sbjct: 116 DFTVAYAPFFQAVFGPKALSIKSFGDLAGKTIAVTRGTIQDDVLQQVAP---PTLKIMRF 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E      AA+ + +        +   A       P        ++  SP    + +G+T 
Sbjct: 173 EDDATTVAAFISQQTQLLATGAAVAAAAVQ--KNPQVQAEYKLLLKDSPNFIGVRKGETA 230

Query: 237 WYNIVSWTHYAM 248
               V+    A 
Sbjct: 231 LLTKVNDILRAA 242


>gi|330900854|gb|EGH32273.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 273

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 83/258 (32%), Gaps = 23/258 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++     + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R  S    F  
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKAR--SEVFNFPV 114

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----- 174
             Y      +++     I S   LSG  + + + ++ E  L         +  P+     
Sbjct: 115 EYYASPAVIVVNATDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFE 174

Query: 175 -----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                 ++               R DA   +   L   K   D+     +  + + + P 
Sbjct: 175 DVQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPN 231

Query: 227 APAIIQGDTEWYNIVSWT 244
           + AI + D EW   V   
Sbjct: 232 SVAIEKDDPEWDAKVRQV 249


>gi|326692574|ref|ZP_08229579.1| amino acid ABC transporter [Leuconostoc argentinum KCTC 3773]
          Length = 491

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 115/352 (32%), Gaps = 50/352 (14%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAE---V 50
           M +   V +  +++   L       +A         IKK G L  G++     F     +
Sbjct: 6   MKQMLMVLVSVMLLIPTLLVFVPKAHADDTDATYAKIKKNGVLVVGMSADYAPFEFHTTI 65

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  GF+V   + L+  +      +Q   +       ALQ+ +ID++    + T  R
Sbjct: 66  NGRDEIVGFEVAMAKQLAKDLGVK---MQIKEMGFDGLIGALQTGKIDVIISGINATPER 122

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAH 167
           E  +   F        Q  ++ KK      +     +G  +  Q  TT E  + +     
Sbjct: 123 EQVVA--FSKPYMSPKQTVLILKKNAPQFTTDVSSFAGKKVGAQRQTTQETFVQENMP-- 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PL 226
                 +  ++V ++ +     +      +     A        +  VI P        +
Sbjct: 179 --NSKLVSLQKVPDLVSQLSTGKIAGIVLNDPISEAYAQQ--NKALAVIYPKPNESEGAV 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTTNPDVQRFL--GIDKS 282
           + A+ +        ++     MV++ +L     + N    +K +           G   +
Sbjct: 235 SIAMPKNSPVLQAKINTAIDQMVSSGQLNKFKKEANTLMFAKQSFWAKYGNLFVKGTLIT 294

Query: 283 SNI-------GEALG-------LTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
             +       G  LG       L+ ++  R+I ++  Y E + R     + L
Sbjct: 295 LALAAVAVIIGVVLGTILALFKLSPNFILRVIGNV--YVE-YVR----GTPL 339


>gi|161519776|ref|YP_001583203.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189354045|ref|YP_001949672.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221210435|ref|ZP_03583415.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
 gi|160343826|gb|ABX16911.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189338067|dbj|BAG47136.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221169391|gb|EEE01858.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
          Length = 261

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +    L      SF+ + S          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRIAKLLATALACAPLVSFAQDTST---------IRWGIDPTYPPFEAKQPDGSLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +    +K  ++  N      AL++++ D++      T  R     + F  
Sbjct: 52  IDLRDAICAQL---HAKCVWVEQNFDGMIPALRARKFDVIMSAMTATEER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +      + S +  L+G  + +  GTT ++     +         + ++  
Sbjct: 107 KLYASPAALVAPAGSKLQSTAASLAGKRVGIIQGTTQDMYAKAEWAPKG--VTIVTYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L  +R        D I+ S +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTERGKHFAFAGDDITDSRITGFGVAMGLRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
                 ++    A+
Sbjct: 225 AALKARLNDAIAAI 238


>gi|62180925|ref|YP_217342.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62128558|gb|AAX66261.1| ABC superfamily (bind_prot), histidine transport protein
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715403|gb|EFZ06974.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 260

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 97/264 (36%), Gaps = 26/264 (9%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           F +S S  A+I   I      + G +     F    A G+  GFD+D  + L   I    
Sbjct: 14  FSSSTSAFAAIPQKI------RIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---N 64

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           ++  ++         +L++K+ID +  +   T  R     +AF    Y      ++ K  
Sbjct: 65  TQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNS 122

Query: 136 GIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            I  +V+ L G  + V  GTT E    +++    +    + ++  + I +   A R DA 
Sbjct: 123 DIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAA 180

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
             D  A     L      ++      +    L        + + D E    ++   +A +
Sbjct: 181 FQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEM 239

Query: 250 TAEELGITQKNINQVSKDTTNPDV 273
            A+          +++K   + DV
Sbjct: 240 RAD------GTYEKLAKKYFDFDV 257


>gi|313123034|ref|YP_004033293.1| ABC amino acid transport/signal transduction system, periplasmic
           component/domain [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279597|gb|ADQ60316.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 270

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 26/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49
           M K     +  L +    +     S              ++  +G L  G+      ++ 
Sbjct: 1   MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G   GF+VD  +A++  +       +++P         L S + D++  N   T  
Sbjct: 61  R-KSGKLTGFEVDLGKAVAKKMGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+      F     +     I  K   ++ +SQ+ G       GT     +         
Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227
           K   +         +  R  R D       A YA    ++   +  +        P  ++
Sbjct: 169 KGTIVPSGDFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227

Query: 228 PAIIQGDTEWYNIVSWTH 245
               + +T+     +   
Sbjct: 228 ALFNKKNTKLLAKFNKAL 245


>gi|225175911|ref|ZP_03729903.1| extracellular solute-binding protein family 3 [Dethiobacter
           alkaliphilus AHT 1]
 gi|225168499|gb|EEG77301.1| extracellular solute-binding protein family 3 [Dethiobacter
           alkaliphilus AHT 1]
          Length = 284

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 82/267 (30%), Gaps = 34/267 (12%)

Query: 2   YKDFFVSILCLIILFFTSFS-----------------------TNASILGDIKKRGFLKC 38
            K+    I+ + IL                                  L  +   G    
Sbjct: 4   KKNLLFLIIAVSILALAVVGCGDNNEPAPDNNNNNNGNDNGEAVGDGSLQRVLDAGEFHV 63

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
             + G   F     +G+  GFDVD   A++  +  +   + Y           L++ + D
Sbjct: 64  VGSGGYRPFNYFDEDGEIVGFDVDTGAAIAERLGVE---LNYGDTAWDGIIEGLRAGRYD 120

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
            +  +   T  R     ++F    Y+ G   ++ +  GI+  S++ G +I V  GTT   
Sbjct: 121 AVLGSMAITDER--LEVVSFTIPYYYSGAQLVVREDSGITDPSEMDGLTIGVATGTTF-- 176

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
             AD  +          +E   +        R D    D               +  +  
Sbjct: 177 --ADDAEELG--ATVSYYEDDNQTLMELINGRIDGVITDRVVAIVNIDGMQGGDQLTMAG 232

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D++    +A A+ Q D E    ++   
Sbjct: 233 DLLRLEQMALALRQDDEELLAELNEIL 259


>gi|261822749|ref|YP_003260855.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261606762|gb|ACX89248.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 256

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 16/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K              TS                   G       F    A  + +GFD
Sbjct: 1   MFKKLLFVGALFATALSTSAFAAEPTY---------VVGSGGTYRPFEFENAQKELEGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +   I+ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 52  IDIIKAVAKA---ENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   I S++ L    + V   +T ++ ++D    +        F+   
Sbjct: 107 PYFPAEQSIVVPKGSTIDSIAALKAHKVGVVNSSTADIVVSDVLGKN--STSIKRFDNTP 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+  +     T+     +++      +     A+ +G+ +    
Sbjct: 165 LMLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLREK 224

Query: 241 VSWTHY 246
           ++    
Sbjct: 225 INAGLK 230


>gi|134296590|ref|YP_001120325.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia vietnamiensis G4]
 gi|134139747|gb|ABO55490.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 260

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 22  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  +V+ L G  + 
Sbjct: 79  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 136

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++     + R DA   D        L   
Sbjct: 137 VEQGSTQESYAKAYWEPQG--VTVIPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 194

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKQDTDLKLKINNAL 235


>gi|91224522|ref|ZP_01259784.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
 gi|91190864|gb|EAS77131.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
          Length = 253

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 26/259 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V  + L  +F  +           K+   ++  +      F+     G  +GF+VD
Sbjct: 2   KWIVVLFISLFSVFSHA-----------KEWKQIRFTVEGAYPPFSWTTKEGKLEGFEVD 50

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              AL   +     K     ++      +L S++ D +      T  RE    + F    
Sbjct: 51  LANALCKEL---EVKCVISKMDWDGIIPSLLSRKNDAIIAAMTITEEREK--KVDFTVPY 105

Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 F+M   + I      L+  SI VQ  T  +  L+    A         +   +E
Sbjct: 106 AKVPTRFVMKNDREINMDDGSLNRLSIGVQRATIGDKYLS----ALYPDIDIRRYGTFDE 161

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236
                   R DA  G    L A  L   +   +       ++          A+ + D E
Sbjct: 162 AFTDLLNGRLDAVFGGSIGLSAGFLETAQGQGYHFTGPAFTEEKWFGRGIGVAVRKQDKE 221

Query: 237 WYNIVSWTHYAMVTAEELG 255
              ++      ++ + +  
Sbjct: 222 LKALLDSGIQKLIQSGKHK 240


>gi|320547043|ref|ZP_08041342.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
 gi|320448328|gb|EFW89072.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
          Length = 269

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 79/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57
           M K    ++  L+ L   +  ++ +    I+ +G +     +    F     +       
Sbjct: 1   MKK-ILGALFLLVTLGTMTACSSGTNQKSIQDKGKIVIATESEFAPFEFKTLINGKDTLV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D++  +A++  +        +  ++      ++ S + DI       T  R+      
Sbjct: 60  GADIELGKAIAKELGVKAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AYD 114

Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      I+ K      S++  LSG SI  Q G+  E    D           + 
Sbjct: 115 FSKSYYEAENVVIVKKTDLAAYSTLDSLSGKSIGAQKGSIQENIAKDQLP----DSSLVS 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                E+    + ++  A   + +        ND  +   +     +    A A  +G  
Sbjct: 171 LTSNGEMINELKNNQLQAVVLEKAIAEGYISQNDDLTIANLNLKSTATDAYAVAFAKGTD 230

Query: 236 -EWYNIVSWTHY 246
            +    V+    
Sbjct: 231 KKLIASVNKVIK 242


>gi|319404356|emb|CBI77956.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella rochalimae ATCC BAA-1498]
          Length = 250

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L   +F  +A++         L          F  + +N    GFD+D   AL   +   
Sbjct: 3   LLAAAFIISATLFSQFVNAKTLTIATEGSYPPFNYIDSNNKLHGFDIDITHALCKKM--- 59

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             +      +     L L +K+ D +  +   T  R     + F    Y      I+ K 
Sbjct: 60  KIECVITIQDFDGIILGLLAKKYDAIIASLSPTQER--LKKIDFTDAYYSTELAAIVPKD 117

Query: 135 KGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
             I   SV    G ++ VQ  TT  +   +++ +     +  ++   +E+     ++R D
Sbjct: 118 SQIKEISVEAFKGKNLGVQLNTTQAIYAENHYASKG--VNIKLYPTTKEVIRDLLSNRLD 175

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               D   +        +   H +     ++ P+A AI Q + +  N  +    
Sbjct: 176 VVILDKLQILDWFKHKGKDCCHFLGSIEGTELPIAIAIRQNNDDLKNQFNKAIK 229


>gi|167585064|ref|ZP_02377452.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 254

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 70/248 (28%), Gaps = 14/248 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++ L+ +   + +  A  L  IK  G  + G       F      G   GFDVD   A
Sbjct: 1   MLLVALLPIVAAANAFAADDLSHIKSSGVFRVGTEGTYAPFTYHDETGRLTGFDVDLATA 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +   P   Q++          L   + D +      T  R+      F        
Sbjct: 61  IAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVVNEVAITDARKA--KYDFSAPYITSR 115

Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              I+      I S   L G        T+    LA    A       +  +   E    
Sbjct: 116 AVLIVRADNTTIRSFDDLKGRKSA-NTLTSNFGKLAAAHGA-----DVVAVQGFNESIDL 169

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWT 244
             + R DA   D  +    +         +   D           I +G  E    +   
Sbjct: 170 LTSGRVDATVNDSLSYLDFRKHKPDAKLKIAATDTSGAGDQSGVLIRKGSPELRAAIDKA 229

Query: 245 HYAMVTAE 252
             A + A+
Sbjct: 230 L-ADIKAD 236


>gi|49484100|ref|YP_041324.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257425970|ref|ZP_05602394.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|282904433|ref|ZP_06312321.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906256|ref|ZP_06314111.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909175|ref|ZP_06316993.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282911481|ref|ZP_06319283.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282919619|ref|ZP_06327354.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C427]
 gi|283958611|ref|ZP_06376062.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295428436|ref|ZP_06821065.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|49242229|emb|CAG40936.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|257271664|gb|EEV03810.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|282317429|gb|EFB47803.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C427]
 gi|282325176|gb|EFB55486.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282327439|gb|EFB57734.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282331548|gb|EFB61062.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282596051|gb|EFC01015.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|283790760|gb|EFC29577.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295127836|gb|EFG57473.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|312437677|gb|ADQ76748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315195770|gb|EFU26157.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus CGS00]
          Length = 485

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L  ++         +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPAAYAEQDQKWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNDYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGVVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|167826829|ref|ZP_02458300.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei 9]
 gi|167921523|ref|ZP_02508614.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei BCC215]
          Length = 256

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 85/245 (34%), Gaps = 19/245 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++ L + +L  ++    A     I      + G++     F     +G   GFDVD    
Sbjct: 1   MAALTVALLAVSAGGVQAKDWSTI------RFGVDASYPPFESKGPDGKVVGFDVDLGNE 54

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +    +K  ++  +      AL++++ D +  +   T  RE  +   F    +   
Sbjct: 55  ICKRV---KAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTP 109

Query: 127 QGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              +  K   +  +   L G ++ V+ GT  E     ++    +K  P  ++  +++ A 
Sbjct: 110 TRLVTKKGANLMPTAESLKGKTVGVEQGTIQETYAKVHWAPMGVKVQP--YQNQDQVYAD 167

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNI 240
             A R DA   D        L   R  ++      ++            + + DT+    
Sbjct: 168 LIAGRLDAALQDAVQADIGFLKTPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAK 227

Query: 241 VSWTH 245
           +    
Sbjct: 228 IDKAI 232


>gi|240126454|ref|ZP_04739340.1| Histidine-binding protein precursor [Neisseria gonorrhoeae
           SK-92-679]
 gi|268685042|ref|ZP_06151904.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-92-679]
 gi|268625326|gb|EEZ57726.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-92-679]
          Length = 268

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    ++ C  +                   G + +   N     F  + + G+ +GF
Sbjct: 3   MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++ A      KI++        F AL +   DI+      T   +    + F 
Sbjct: 63  DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADIVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K +SS   L     + V  G T + +++      N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +GD   
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 VKMLNDALEKVRESGEYD 252


>gi|59801519|ref|YP_208231.1| ABC transporter, periplasmic histidine-binding protein precursor
           [Neisseria gonorrhoeae FA 1090]
 gi|194099507|ref|YP_002002631.1| Histidine-binding protein precursor [Neisseria gonorrhoeae
           NCCP11945]
 gi|240014879|ref|ZP_04721792.1| Histidine-binding protein precursor [Neisseria gonorrhoeae DGI18]
 gi|240017328|ref|ZP_04723868.1| Histidine-binding protein precursor [Neisseria gonorrhoeae FA6140]
 gi|240113751|ref|ZP_04728241.1| Histidine-binding protein precursor [Neisseria gonorrhoeae MS11]
 gi|240116484|ref|ZP_04730546.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID18]
 gi|240118700|ref|ZP_04732762.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID1]
 gi|240120946|ref|ZP_04733908.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID24-1]
 gi|240124247|ref|ZP_04737203.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID332]
 gi|254494502|ref|ZP_05107673.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|260439765|ref|ZP_05793581.1| Histidine-binding protein precursor [Neisseria gonorrhoeae DGI2]
 gi|268599821|ref|ZP_06133988.1| amino acid ABC transporter [Neisseria gonorrhoeae MS11]
 gi|268602156|ref|ZP_06136323.1| amino acid ABC transporter [Neisseria gonorrhoeae PID18]
 gi|268604416|ref|ZP_06138583.1| amino acid ABC transporter [Neisseria gonorrhoeae PID1]
 gi|268682877|ref|ZP_06149739.1| amino acid ABC transporter [Neisseria gonorrhoeae PID332]
 gi|291043021|ref|ZP_06568756.1| histidine-binding protein [Neisseria gonorrhoeae DGI2]
 gi|59718414|gb|AAW89819.1| ABC transporter, periplasmic histidine-binding protein precursor
           [Neisseria gonorrhoeae FA 1090]
 gi|193934797|gb|ACF30621.1| Histidine-binding protein precursor [Neisseria gonorrhoeae
           NCCP11945]
 gi|226513542|gb|EEH62887.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268583952|gb|EEZ48628.1| amino acid ABC transporter [Neisseria gonorrhoeae MS11]
 gi|268586287|gb|EEZ50963.1| amino acid ABC transporter [Neisseria gonorrhoeae PID18]
 gi|268588547|gb|EEZ53223.1| amino acid ABC transporter [Neisseria gonorrhoeae PID1]
 gi|268623161|gb|EEZ55561.1| amino acid ABC transporter [Neisseria gonorrhoeae PID332]
 gi|291013061|gb|EFE05032.1| histidine-binding protein [Neisseria gonorrhoeae DGI2]
          Length = 268

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 87/258 (33%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    ++ C  +                   G + +   N     F  + + G+ +GF
Sbjct: 3   MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++ A      KI++        F AL +   D++      T   +    + F 
Sbjct: 63  DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K +SS   L     + V  G T + +++      N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +GD   
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 VKMLNDALEKVRESGEYD 252


>gi|325519853|gb|EGC99131.1| polar amino acid transport system substrate-binding protein
           [Burkholderia sp. TJI49]
          Length = 261

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 91/254 (35%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + S          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRIATLLVTALACAPLVSFAQDPST---------IRWGIDPTYPPFEAKQPDGSLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++  N      AL++++ D++      T  R     + F  
Sbjct: 52  IDLRNAICEQL---RAKCVWVEQNFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +      + S +  L+G  + +  GTT ++     +         + ++  
Sbjct: 107 KLYASPAALVAPAGSKLQSTAASLAGKRVGIIQGTTQDMYAKAEWAPKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L  +R        D I+ + +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTERGKHFAFAGDDITDARITGFGVAMGLRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
           T   N ++    A+
Sbjct: 225 TAMKNRLNGAIAAI 238


>gi|284159968|ref|YP_001058140.2| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 668]
 gi|283775063|gb|ABN81391.2| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Burkholderia pseudomallei 668]
          Length = 258

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 77  ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +    ++   
Sbjct: 193 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 233


>gi|226949314|ref|YP_002804405.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226843538|gb|ACO86204.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 272

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S +  IK+ G L  G       +  
Sbjct: 1   MSKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +DI+    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  I Y   Q  ++  +      S+ +  G  I VQ GTT E    +  
Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           K            +V ++    +  + D    +     +       
Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217


>gi|167823233|ref|ZP_02454704.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 9]
          Length = 258

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 77  ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  + ++   
Sbjct: 193 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 233


>gi|330429802|gb|AEC21136.1| arginine 3rd transport system periplasmic binding protein
           [Pusillimonas sp. T7-7]
          Length = 270

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 85/259 (32%), Gaps = 32/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F    +    L     S  A           LK G   G   ++ V A+G   GFD
Sbjct: 1   MITTFLQKAVLGAGLALVGLSATADT---------LKIGTEGGYPPWSMVDASGKVSGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +  D    +++         +L + + D++      T  R  S  + F  
Sbjct: 52  ADVGNALCKELDAD---CRFVVQAFDSLIPSLDANRFDLIISGMSVTPER--SKRITFSI 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-------LSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               +   F++ K   + +          L+G ++ VQ GTT    L           + 
Sbjct: 107 PYAVEDAIFVLPKDSELITADSPEAIFKGLAGKTVGVQGGTTHGDYLRQKAG----DLNI 162

Query: 174 IVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSP------L 226
             ++ ++++     A R DA +    S    LK   D+      L    S +P      +
Sbjct: 163 KNYDTLDQMQIDLDAGRLDATFADLTSQSKFLKKVGDKDFSLSKLVIKGSSAPEVLGYGI 222

Query: 227 APAIIQGDTEWYNIVSWTH 245
              I + +TE    V    
Sbjct: 223 GIGINKNNTELKEKVDAAL 241


>gi|315652801|ref|ZP_07905775.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
 gi|315485003|gb|EFU75411.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Eubacterium saburreum DSM 3986]
          Length = 289

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 12/219 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +IKK G +  G+ +    F  V  NG+++G+D+ F   L   +      I Y+   A
Sbjct: 43  TLDEIKKSGTINIGVFSDKHPFGYVDENGEYQGYDIYFGNKLGEDLGVK---INYVSTEA 99

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144
             R   L++ ++D++  N   T  R     + F       G G I  +   + S+ +  +
Sbjct: 100 ANRVEYLETGKVDLILANFTVTPERAE--AVDFALPYMNVGLGVISSESNKVDSLDNWNA 157

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              + V +GTT E     +   +        ++       A       A+  D +    L
Sbjct: 158 SDEMIVISGTTAEP----FMIKNYPNIKLQKYDTYANAKNALLNGSGKAWVNDNT--EVL 211

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 P   V + D+  K  +APA+ +G+T   + V+ 
Sbjct: 212 AFAKSNPGYVVGIDDLGVKDTIAPAVTKGNTTLLDWVNS 250


>gi|107027773|ref|YP_625284.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           cenocepacia AU 1054]
 gi|116693517|ref|YP_839050.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia HI2424]
 gi|170737205|ref|YP_001778465.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia MC0-3]
 gi|105897147|gb|ABF80311.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116651517|gb|ABK12157.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169819393|gb|ACA93975.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia MC0-3]
          Length = 260

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 87/255 (34%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ S  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGSAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   I    +K  ++  +      AL++++ D +  +   T  R   +   F  
Sbjct: 53  VDLGNEICRRI---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARAEQIA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   +  +   L G S+ V+ GT  E     ++ +     + + ++  
Sbjct: 108 KLFNTPTRLVTKKGANLQPTAESLKGKSVGVEQGTIQETYAKAHWASKG--VNIVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233
           +++ A   + R D    D        L   R +            P          + + 
Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGK-DLDDPKTLGNGAGIGLRKE 224

Query: 234 DTEWYNIVSWTHYAM 248
           DT+    +      M
Sbjct: 225 DTDLKAKIDGAIAGM 239


>gi|264678000|ref|YP_003277907.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2]
 gi|262208513|gb|ACY32611.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2]
          Length = 300

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 9/230 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66
           +++    +   +   +++    IK+ G L+ G       F+ +   +G  +GFD+   + 
Sbjct: 36  ALVAQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  I  D +K Q+  + +  R   L + Q+D++      T  R     ++F    Y   
Sbjct: 96  ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAE--KISFAGPYYTSQ 153

Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            G ++      + S + L G  +  QAG+T    LA Y            F+  +E   A
Sbjct: 154 SGVLVKSNNKTVQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            R  R DAY  D + L    L+    +  +      ++ P    + +G  
Sbjct: 210 LRQGRVDAYVTDYTLLL-NALSLGTSNARLAGAPFGAQDPYGVGLPKGSD 258


>gi|226948690|ref|YP_002803781.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226843304|gb|ACO85970.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 268

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 20/257 (7%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50
           M K   +S+L    C+I           S          IK +G L  G+      F   
Sbjct: 1   MSKKKILSVLFIVVCIISFTLIGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G+ +GFDVD  + L   +     K++      +     +     D+L         
Sbjct: 61  NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
            E ++  +       D    +      I +   L G  + VQ  T++E  +       + 
Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNFIHNKGDLKGKVVGVQTSTSSEQVV----DKLDG 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 + R  E     + +R DA      A  A  + + +     I+   +  S +   
Sbjct: 173 IKEIKRYNRNPEAFIDLKNNRIDAVVVG-YAYAATTMKDKKDDNLKIINSPVGSSDIVMV 231

Query: 230 IIQGDTEWYNIVSWTHY 246
             +G  +    ++    
Sbjct: 232 TKKGSDDLTKELNKALK 248


>gi|206562619|ref|YP_002233382.1| periplasmic lysine-arginine-ornithine-binding protein [Burkholderia
           cenocepacia J2315]
 gi|198038659|emb|CAR54619.1| periplasmic lysine-arginine-ornithine-binding protein [Burkholderia
           cenocepacia J2315]
          Length = 257

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 19/219 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L  L   + + + S          ++ G++     F    A+G   GFD
Sbjct: 1   MKK--LALSIALACLAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    + + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 50  VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   +  +   L G S+ V+ GT  E     Y+         + ++  
Sbjct: 105 KLFNTPTRLVAKKGANLQPTAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           + +     + R DA   D        L   R +      
Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADIGFLKTPRGANFQFAG 201


>gi|148379387|ref|YP_001253928.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|153933854|ref|YP_001383763.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|153936568|ref|YP_001387313.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. Hall]
 gi|168180086|ref|ZP_02614750.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
 gi|148288871|emb|CAL82955.1| putative ABC transporter, substrate-binding lipoprotein
           [Clostridium botulinum A str. ATCC 3502]
 gi|152929898|gb|ABS35398.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932482|gb|ABS37981.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A str. Hall]
 gi|182669146|gb|EDT81122.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
 gi|322805727|emb|CBZ03292.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (TC 3.A.1.3.2) [Clostridium botulinum H04402 065]
          Length = 268

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 20/257 (7%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50
           M K   +S+L    C+I           S          IK +G L  G+      F   
Sbjct: 1   MSKKKILSVLFIVVCIISFTLIGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G+ +GFDVD  + L   +     K++      +     +     D+L         
Sbjct: 61  NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
            E ++  +       D    +      I +   L G  + VQ  T++E  +       + 
Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNFIHNKGDLKGKVVGVQTSTSSEQVV----DKLDG 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 + R  E     + +R DA      A  A  + + +     I+   +  S +   
Sbjct: 173 IKEIKRYNRNPEAFIDLKNNRIDAVVVG-YAYAATTMKDKKDDNLKIINSPVGSSDIVMV 231

Query: 230 IIQGDTEWYNIVSWTHY 246
             +G  +    ++    
Sbjct: 232 TKKGSDDLTKELNKALK 248


>gi|145297726|ref|YP_001140567.1| ABC-type arginine transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850498|gb|ABO88819.1| ABC-type arginine transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 245

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 21/209 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  + +L  +  +              +K         F  +    +++GFD
Sbjct: 1   MKKSLLL-VAAMGLLSTSVLA------------KEIKFATEATYAPFEYLDDKNEFQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+ + +     +  +          +L+ ++ D      D T  R     + F  
Sbjct: 48  IDLARAICTQV---KLECSFHNQAFDSLIPSLKFRRYDAAIAAMDVTPERAA--QVDFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y +   F+  K         L   ++ VQ G++ +  L D + +       + +   +
Sbjct: 103 IYYENSAVFVAKKGTF-KGPEDLVDKTVGVQNGSSHQSYLVDNWISKG--LLTVPYASYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                    R D    D +        + 
Sbjct: 160 SAFLDMMNGRTDGVFADTAVAADWLKQHK 188


>gi|150389460|ref|YP_001319509.1| extracellular solute-binding protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149949322|gb|ABR47850.1| extracellular solute-binding protein, family 3 [Alkaliphilus
           metalliredigens QYMF]
          Length = 275

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 88/262 (33%), Gaps = 29/262 (11%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49
           M K F        V++  +I++   S +  AS     L  ++  G L  G +     +  
Sbjct: 1   MKKGFGKFIKIGIVALSLIILVTGCSQAPGASSEQSKLEAVQSSGKLVLGTSADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              V       GFD++  + ++  +  +   ++   ++      AL +  ID++      
Sbjct: 61  YAEVDGALQVVGFDIEIAKEIAKDMGVE---LEIRDMDFDGLLSALVTGNIDMIIAGMVP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164
           +  R+    + F    Y   Q  ++        S+V   +G ++  Q  T  E    +  
Sbjct: 118 SDERKK--SVDFSVPYYSAEQTMVVRAADFDKFSTVEDFTGLTVGAQTATIQEEIAKEQI 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                         + ++    + +R D          A     +   + V+      + 
Sbjct: 176 A----NAELRTLSVITDLVMDLKTNRIDGVVLVEPVAKAY---AENNDDVVVSQLHFGQE 228

Query: 225 P-LAPAIIQGDTEWYNIVSWTH 245
             +A A+ +   ++ N ++ T 
Sbjct: 229 DGVAVAVAKDTDDFLNSINTTL 250


>gi|261821244|ref|YP_003259350.1| cationic amino acid ABC transporter periplasmic protein
           [Pectobacterium wasabiae WPP163]
 gi|261605257|gb|ACX87743.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium wasabiae WPP163]
          Length = 243

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I    T+                ++   +     F  + A+ +  GFD
Sbjct: 1   MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ ++ D +    D T  R  S  + F  
Sbjct: 48  MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPER--SKQVTFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S  + + G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +     T+  P    +   +         L  A+   D  
Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWIKTS--PELATVGEHVTDAEYFGTGLGIAVRPDDKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNKALDAI 227


>gi|171322525|ref|ZP_02911317.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MEX-5]
 gi|171092140|gb|EDT37549.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MEX-5]
          Length = 258

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 77  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKHVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        + ++  +++     + R DA   D        L   
Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTVVPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINKAL 233


>gi|317047529|ref|YP_004115177.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Pantoea sp. At-9b]
 gi|316949146|gb|ADU68621.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. At-9b]
          Length = 243

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 76/213 (35%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V ++   +GFDVD   AL   I    +   +          +L+ 
Sbjct: 22  TLRFATEASYPPFEFVDSDNKIQGFDVDLANALCKEI---DATCTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D +    D T  RE    + F    Y +   FI  K   ++ V+ L G  + VQ GT
Sbjct: 79  RRFDAVMAGMDITPEREK--QVLFTKPYYDNSAIFIAQKG-KLADVAALKGKRVGVQNGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L+D     +     + ++  +      +  R DA  GD + +      N   +  
Sbjct: 136 THQKYLSD----KHSDITVVPYDSYQNAILDLKNGRIDAVFGDTAVVNEWLKQNPNLAAL 191

Query: 215 --VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       + L  A+  G+TE     +   
Sbjct: 192 GDKVTDKAYFGTGLGIAVRMGNTELQEKFNAAL 224


>gi|50121595|ref|YP_050762.1| arginine-binding periplasmic protein 2 [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612121|emb|CAG75571.1| arginine-binding periplasmic protein 2 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 243

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I    T+                ++   +     F  + A+ +  GFD
Sbjct: 1   MKKLVLATLLAGITFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S  + + G  I ++ GTT +  + D     + +   + ++  +
Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHD----KHTEVQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P    +   +         L  A+   D  
Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KTNPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNKALDAI 227


>gi|304387902|ref|ZP_07370076.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria meningitidis ATCC 13091]
 gi|261392846|emb|CAX50427.1| putative amino acid ABC transporter binding lipoprotein [Neisseria
           meningitidis 8013]
 gi|304338167|gb|EFM04303.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Neisseria meningitidis ATCC 13091]
 gi|325135990|gb|EGC58600.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis M0579]
 gi|325198006|gb|ADY93462.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis G2136]
 gi|325202417|gb|ADY97871.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis M01-240149]
 gi|325206371|gb|ADZ01824.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis M04-240196]
 gi|325207831|gb|ADZ03283.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis NZ-05/33]
          Length = 275

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|15805591|ref|NP_294287.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
 gi|6458259|gb|AAF10144.1|AE001914_6 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
          Length = 261

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 72/215 (33%), Gaps = 10/215 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G LK  +      F      G+  GFDVD  +A++  +   P    ++          LQ
Sbjct: 36  GTLKIAMEGTYPPFTSKNEQGELVGFDVDIAKAVAQKLNLKPE---FVLTEWSGILAGLQ 92

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D++      T  R+ S+G +              +      S++ L G  +    G
Sbjct: 93  ANKYDVIVNQVGITPERQNSIGFSQPYAYSRPEIIVAKNNTFNPQSLADLKGKRVGSTLG 152

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L D           + +    EI A   A R DA   D   +  +      P  
Sbjct: 153 SNYEKQLIDT-----GDIKIVTYPGAPEILADLVAGRIDAAYNDRLVVNYIINDQKLPV- 206

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 I   +P+  A+ +G++   + +      M
Sbjct: 207 -RGAGQIGDAAPVGIALKKGNSALKDQIDKALTEM 240


>gi|121634581|ref|YP_974826.1| putative amino acid permease substrate-binding protein [Neisseria
           meningitidis FAM18]
 gi|218767906|ref|YP_002342418.1| putative amino acid permease substrate-binding protein [Neisseria
           meningitidis Z2491]
 gi|120866287|emb|CAM10028.1| putative amino acid permease substrate-binding protein [Neisseria
           meningitidis FAM18]
 gi|121051914|emb|CAM08220.1| putative amino acid permease substrate-binding protein [Neisseria
           meningitidis Z2491]
 gi|325131979|gb|EGC54678.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis M6190]
 gi|325137810|gb|EGC60385.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis ES14902]
          Length = 275

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|320538106|ref|ZP_08038003.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
 gi|320145040|gb|EFW36759.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
          Length = 274

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 24/261 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K      L  +     +       S    IK+ G +  G +     +          +
Sbjct: 1   MKKIIQGIALFALFFIPVACGGGEKKSKYTSIKEEGKIVLGTSADYPPYEFHLQKDGKDE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+   + ++  +  +   +    ++      AL +  +D++      T  RE    
Sbjct: 61  IVGFDISIAKEIAKDLGVE---LVIKDMDFDGLLAALATGTVDMVLAGMTPTPERE--QN 115

Query: 116 LAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKA------ 166
           + F  I Y   QG ++         SS   L    +  Q GT          K       
Sbjct: 116 VDFSNIYYIAEQGVLIRSADAALYGSSSESLKDKMLGAQRGTVQVEIAKKEIKGVAEKDL 175

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKS 224
            +         ++ +I    +  + DA   ++    + +  +   +   +    +     
Sbjct: 176 EDPHAQIKELAKIPDIVMELKNKKVDAVIMELPVAESYQQAHSDLTLAAYTFKDESGGS- 234

Query: 225 PLAPAIIQGDTEWYNIVSWTH 245
             A A+ +G+ E  ++++ T 
Sbjct: 235 --AIAVKKGENELLDVINKTI 253


>gi|303253497|ref|ZP_07339637.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|303253757|ref|ZP_07339893.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248706|ref|ZP_07530719.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|302647413|gb|EFL77633.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302647650|gb|EFL77866.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854633|gb|EFM86823.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
          Length = 260

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  +  I L  ++ S     L   I  +G +  G       F    A+G   G+
Sbjct: 1   MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L++ + D+++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   ++    + I   S + G     Q  ++    LA    A       +  + 
Sbjct: 117 AAYSWSGAALVVRNDEQKIKQASDVKGVKTA-QTLSSNYGELARANGA-----DIVPIDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +     +  R DA   D  AL      N +P   ++               +G+ E  
Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPKPGLKIVWESPEKVDA-GFIANKGNQEAL 229

Query: 239 NIVSWTH 245
           N +S   
Sbjct: 230 NKISAAI 236


>gi|206576547|ref|YP_002237300.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Klebsiella pneumoniae 342]
 gi|206565605|gb|ACI07381.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Klebsiella pneumoniae 342]
          Length = 260

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 87/245 (35%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   +   ++ L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVKKGSPVTPDLATLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      I    L        + + D E    ++        AE         ++++K  
Sbjct: 200 YQFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKAF-----AEMRK--DGTYDKMAKKY 252

Query: 269 TNPDV 273
            + +V
Sbjct: 253 FDFNV 257


>gi|167855089|ref|ZP_02477862.1| putative amino-acid ABC transporter-binding protein [Haemophilus
           parasuis 29755]
 gi|167853827|gb|EDS25068.1| putative amino-acid ABC transporter-binding protein [Haemophilus
           parasuis 29755]
          Length = 260

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 12/212 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K   +  L L  +F ++ +    S+L  I  +G +  G       F    A+G   G+
Sbjct: 1   MFKKLSIVALSLAAVFTSTTALAKESLLDRINNKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L+ ++ DI++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKGERFDIVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   +       +S    + G     Q  ++    LA    A       +  + 
Sbjct: 117 AEYSWSGAMLLARNDETRVSKAEDVKGLK-AAQTLSSNYGELAQKNGA-----EIVAVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + +     +  R D    D  AL      N  
Sbjct: 171 MAQALLLLQQKRADVTFNDSLALLDYLKKNPN 202


>gi|666981|emb|CAA54724.1| putative amino acid binding subunit [Bacillus subtilis subsp.
           subtilis str. JH642]
          Length = 268

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      + + I    +              +  +   IKK+G L  G       F  
Sbjct: 1   MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              +     G+DV+    +++++     K+ +        F  L SK+ D+++     T 
Sbjct: 61  HDKDTDKLTGYDVEVITEVANSLG---LKVDFKETQWDSMFAGLNSKRFDVVANQVGKT- 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +      F           +  K    I S + + G +   Q+ T+    LA    A 
Sbjct: 117 --DRENQYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    E + +     +  R D    D  A+     T+   +  +       +S   
Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGEPQSTY- 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               +G  E  + V+     M  
Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250


>gi|239999700|ref|ZP_04719624.1| Histidine-binding protein precursor [Neisseria gonorrhoeae 35/02]
 gi|268595514|ref|ZP_06129681.1| histidine-binding protein [Neisseria gonorrhoeae 35/02]
 gi|584826|sp|Q06758|HISJ_NEIGO RecName: Full=Histidine-binding protein; Short=HBP; Flags:
           Precursor
 gi|49068|emb|CAA45768.1| unnamed protein product [Neisseria gonorrhoeae]
 gi|268548903|gb|EEZ44321.1| histidine-binding protein [Neisseria gonorrhoeae 35/02]
 gi|317165013|gb|ADV08554.1| ABC transporter, periplasmic histidine-binding protein precursor
           [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 268

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    ++ C  +                   G + +   N     F  + + G+ +GF
Sbjct: 3   MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++ A      KI++        F AL +   DI+      T   +    + F 
Sbjct: 63  DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADIVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K +SS   L     + V  G T + +++      N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +GD   
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 VKMLNDALEKVRESGEYD 252


>gi|226315383|ref|YP_002775279.1| glutamine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226098333|dbj|BAH46775.1| glutamine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 258

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 94/247 (38%), Gaps = 10/247 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +  L+ L  ++  T                G +     F   + +G + G D
Sbjct: 1   MKKLMFAVVSGLLALTVSACGTGTDQAASTSGAKKYVFGTDATYPPFEF-EKDGKYVGID 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++     +  +++  P++ K    A+Q+KQ+D           R+    L F  
Sbjct: 60  IDLINAIAKE---EGFEVEIKPMDFKGIIPAVQAKQLDGAIAGISINDKRKEI--LDFSE 114

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++ +    I+  + L+G +I ++ GTT      +  + +        F+  
Sbjct: 115 PYYQAGLSLVVREDNTTINGEADLAGKTIAIKKGTTGATFADELGQKYG--ATVKYFDDS 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +    +    D    D   + + K+T D  S+  I+ D ++      A+++G+ E  +
Sbjct: 173 PSMFQEVQNGNADVTIEDYPVI-SYKITVDPASKLKIVGDRLNGDHYGIAVLKGNKELQD 231

Query: 240 IVSWTHY 246
            ++    
Sbjct: 232 KLNSGLK 238


>gi|331085657|ref|ZP_08334740.1| hypothetical protein HMPREF0987_01043 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406580|gb|EGG86085.1| hypothetical protein HMPREF0987_01043 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 245

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M ++  + ++ + I                 +      ++ +     G +     +  + 
Sbjct: 1   MKRNLAIFLMGMTIATMVLGGCKDKENISKKDGKESESVEDKKTFTVGFDAEYPPYGYMD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG++ GFD++   A+      +  K    P+N   + + L S  ID +          E
Sbjct: 61  ENGEYTGFDLELAEAVCELEGWELVK---KPINWDSKDMELNSGAIDCIWNGFTMNGREE 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKA 166
                 F      + Q  ++ +K G+ ++  L G S+ VQA +     L           
Sbjct: 118 E---YTFSTPYVDNSQVIVVAEKSGMKTLEDLQGKSVGVQAASAALDLLQSEEEGGQKAL 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            +       F          +A   DA   D     A      R   + IL + ++    
Sbjct: 175 ADTFSALNEFADYNTAFTELQAGALDALAID--VGVANYQIKSRGEGYQILEETLNTEQY 232

Query: 227 APAIIQGDTEWYN 239
           A    +    +  
Sbjct: 233 AIGFKKEIRNYAM 245


>gi|170690823|ref|ZP_02881989.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170144072|gb|EDT12234.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 256

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 85/252 (33%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +   + L   +F+  +           L+ GI+           +G  KGFD
Sbjct: 1   MKLPLMMIVSAALALSSGAFAAGSDT---------LRLGIDPSYPPMDSKSPDGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   I    ++ Q++ L       ALQ+++ID +  +   T  RE    + F  
Sbjct: 52  VDLGNEICRRI---KARCQWVELEFSGMIPALQARKIDAILSSMAITQKRE--QQILFTS 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I  +   + + +  LSG  I VQ+GT  E      +       H + ++  
Sbjct: 107 KLFQFKSRLIARQGSPLAAGLQALSGKQIGVQSGTQFEGYALKNWTPLG--AHVVAYKSQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E+ A  +  R D             L          + + +S       I     E   
Sbjct: 165 DEVFADLQNGRLDGALLGSVEADFGFLRTPSGKGFAFVGEPLSMGDRGTGIGLRKDE--T 222

Query: 240 IVSWTHYAMVTA 251
            V  +  A + A
Sbjct: 223 AVQASMNAAIAA 234


>gi|15676685|ref|NP_273829.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis MC58]
 gi|7226019|gb|AAF41200.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis MC58]
          Length = 275

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   ++     I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVVRNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|295090528|emb|CBK76635.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
          Length = 282

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 14/212 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G N     +     +    G DV+   A+   +  D   +Q   +       AL 
Sbjct: 65  GTLIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALV 120

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S ++D ++     T  RE    + F        Q  I+ +   I+SV  L+G  + VQ G
Sbjct: 121 SDKVDFVAAGMTVTPDREA--SVNFTDTYATAAQVIIVKEGSDIASVDDLAGKVVGVQLG 178

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +L +++             + +  E   +    + DA   D       K    +   
Sbjct: 179 TTGDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDN---APAKNFVAQGDG 230

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            VIL + +S    A A+ + +TE    ++   
Sbjct: 231 LVILEEALSSEDYAMAVNKDNTELLEQINGAI 262


>gi|227529476|ref|ZP_03959525.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350561|gb|EEJ40852.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
          Length = 263

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 18/215 (8%)

Query: 1   MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K   V++  + +          + ++ +  ++K++G L  G+      ++    N 
Sbjct: 1   MKIWKKVLVTLAAVTVGTTAGISSIHAASSQVNSELKQKGELTIGLEGTYSPYSYR-KNN 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  +A++  +       +++P         L S + D++  N   T  R    
Sbjct: 60  KLTGFEVDLGKAVAKEMGLKA---KFVPSKWDSLVAGLGSGKYDVVMNNITQTPERAK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           I+ K   I ++ Q+SG  I    GT     +             +
Sbjct: 115 KYNFSTPYIKSRYVLIVPKDSKIKNLKQISGKKIVAGTGTNNADVV------KKYHGTLV 168

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                    A  +  R +       A YA    N 
Sbjct: 169 PNGEFSNSVAMVKQGRAEGTVNSREAWYAYSKKNS 203


>gi|319782449|ref|YP_004141925.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168337|gb|ADV11875.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 268

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 82/223 (36%), Gaps = 11/223 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L DI KRG L+  + T    F+ V ANG+  G  V+    ++  +    + + +   + 
Sbjct: 30  TLDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEMGVKITFLDF---DW 86

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-- 143
                AL S + D+L  +   TL R   + +AF     + G            +      
Sbjct: 87  DGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYMYTGSTVFTKADSKFKTTEDCKA 144

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  I V  G T E    + F   ++K           +  A    + D    D+SA+  
Sbjct: 145 KGTKIAVLLGATGEKEAKNAFPDADIKS---YKGGGPLLLDAVNNGQADCGVNDVSAVKG 201

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                   +   I+PD++SK PLA A    + +    ++    
Sbjct: 202 QSTAYPAGT-FTIMPDLLSKEPLAFATRYDEPDLLIWMNLFLN 243


>gi|269968267|ref|ZP_06182293.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269827124|gb|EEZ81432.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 253

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 26/259 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V  + L  +F  +           K+   ++  +      F+     G  +GF+VD
Sbjct: 2   KWIVVLFISLFSVFSHA-----------KEWKQIRFTVEGAYPPFSWTTKEGKLEGFEVD 50

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              AL   +     K     ++      +L S++ D +      T  RE    + F    
Sbjct: 51  LANALCKEL---EVKCVISKMDWDGIIPSLLSRKNDAIIAAMTITEEREK--KVDFTVPY 105

Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 F+M   + I      L+  SI VQ  T  +  L+    A         +   +E
Sbjct: 106 AKVPTRFVMKNDREINMDDGSLNRLSIGVQRATIGDKYLS----ALYPDIDIRRYGTFDE 161

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236
                   R DA  G    L A  L   +   +       ++          A+ + D E
Sbjct: 162 AFTDLLNGRLDAVFGGSIGLSAGFLETAQGEGYHFTGPAFTEEKWFGRGIGVAVRKQDKE 221

Query: 237 WYNIVSWTHYAMVTAEELG 255
              ++      ++ + +  
Sbjct: 222 LKALLDSGIQKLIQSGKHK 240


>gi|289676780|ref|ZP_06497670.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330981545|gb|EGH79648.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 260

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ +   + R DA   D+       L +   +++     +   +  +  A  I QG+ E
Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAQGNKE 225

Query: 237 WYNIVSWTHYAM 248
              ++     AM
Sbjct: 226 LKALLDKGIKAM 237


>gi|15677462|ref|NP_274618.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis MC58]
 gi|7226862|gb|AAF41964.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis MC58]
 gi|316983864|gb|EFV62844.1| bacterial extracellular solute-binding s, family 3 family protein
           [Neisseria meningitidis H44/76]
 gi|325134711|gb|EGC57350.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis M13399]
 gi|325140742|gb|EGC63256.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis CU385]
 gi|325199793|gb|ADY95248.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis H44/76]
          Length = 268

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 83/238 (34%), Gaps = 15/238 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +  A+    +      +   N     F  + + G+ +GFDVD   A++ A      KI+
Sbjct: 28  TAAPAANPDKV-----YRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIE 79

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +        F AL +   D++      T   +    + F    +   Q  ++ K K +SS
Sbjct: 80  FKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKVSS 137

Query: 140 VSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
              L     + V  G T + +++      N       FE V  I         D+   D 
Sbjct: 138 SEDLKNMNKVGVVTGYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDS 195

Query: 199 SALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +      N  +  + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 196 AVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252


>gi|325521713|gb|EGD00469.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. TJI49]
          Length = 258

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---DVKCVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ DI+  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 77  ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++     + R DA   D        L   
Sbjct: 135 VEQGSTQESYAKAYWEPAG--VTVIPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINKAL 233


>gi|315656553|ref|ZP_07909440.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492508|gb|EFU82112.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 319

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 17/254 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL-----GDIKKR--GFLKCGINTGLVGFAEVKAN- 53
            K   V+    +        + AS        ++ K        G +     +       
Sbjct: 48  KKIVSVAAGFALAFSLAGCGSAASNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKT 107

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G++ GFD+D    ++     +   ++  P++   + + L S  +D L          +  
Sbjct: 108 GEYTGFDMDLATEVAKR---NHWTLEKKPIDWDSKDMQLSSGSVDCLWNGFTMNGREDK- 163

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKY 171
               +      +   F+      +   + L+G ++ VQA ++    L D           
Sbjct: 164 --YTWSKPYVDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFK 221

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                        +  A   DA   D+        T  +   + I+   +          
Sbjct: 222 TLNKVPDYNNAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFK 280

Query: 232 QGDTEWYNIVSWTH 245
            G+    + V  T 
Sbjct: 281 LGNKALRDQVQTTL 294


>gi|293398356|ref|ZP_06642547.1| histidine-binding protein [Neisseria gonorrhoeae F62]
 gi|291611280|gb|EFF40364.1| histidine-binding protein [Neisseria gonorrhoeae F62]
          Length = 268

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    ++ C  +                   G + +   N     F  + + G+ +GF
Sbjct: 3   MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++ A      KI++        F AL +   D++      T   +    + F 
Sbjct: 63  DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K +SS   L     + V  G T + +++      N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +G+   
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGNEAT 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 VKMLNDALEKVRESGEYD 252


>gi|187779363|ref|ZP_02995836.1| hypothetical protein CLOSPO_02959 [Clostridium sporogenes ATCC
           15579]
 gi|187772988|gb|EDU36790.1| hypothetical protein CLOSPO_02959 [Clostridium sporogenes ATCC
           15579]
          Length = 272

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S +  IK+ G L  G       +  
Sbjct: 1   MSKKILGKLGAIIISLTMVISLVACGKNTASNEGKSKVDKIKESGKLVIGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +D++    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDMVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  + Y   Q  ++  +      S+    G  I VQ GTT E       
Sbjct: 118 TEDRKK--SVDFSKVYYQAIQSVVVRAEDKDKFKSIEDFKGKKIGVQKGTTQEEVAKREM 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                        +V ++    +  + D    +     +       
Sbjct: 176 ----TNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYASNGKD 217


>gi|157691140|ref|YP_001485602.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157679898|gb|ABV61042.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus SAFR-032]
          Length = 264

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 74/236 (31%), Gaps = 14/236 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K + V +   ++    +   N     + K    LK G       FA    NG   GF
Sbjct: 1   MKNKKWLVILFAAMLAVLAACGGNNQS--EGKDEKVLKVGATGQSYPFAYKD-NGKLVGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+   A++  +      + +           L S ++D +S     T  R+      F 
Sbjct: 58  DVEVTEAIAKKLGYK---LDWQLSEFSGLMGQLTSGKLDTVSNQVAVTDERK--QTFNFT 112

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   I+ K    I  +  L G ++    G+     L        +  +   +E 
Sbjct: 113 DTYAYAGTQIIVKKDNNDIKGLDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYET 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            + +       R DAY    S L A       P    I+ + I    +     +  
Sbjct: 171 QDGVLNEVANGRVDAYVNGRSVLLAQIEKTGLP--LKIVGNPIVYEEVGYPFAKDK 224


>gi|326560580|gb|EGE10961.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 103P14B1]
 gi|326576282|gb|EGE26197.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis CO72]
          Length = 265

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M      +     +    + S  ++                 L     +    F+ +   
Sbjct: 1   MTTVLKFTTAAFCVSLLAACSNESTTNTKTAAAPNSSTSQKELIIATESSFKPFSYLDKQ 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF++D   AL   +  D    Q +  +      +L + + D +      T  R   
Sbjct: 61  GQLVGFEIDLANALCKQMQTD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    + +    I  K     +++ ++G ++  Q  T +   L  ++   N     
Sbjct: 116 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +++ +       A R +    D+        T       +    I     +  A+ + 
Sbjct: 171 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 230

Query: 234 DT 235
            +
Sbjct: 231 SS 232


>gi|221199372|ref|ZP_03572416.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans CGD2M]
 gi|221205726|ref|ZP_03578741.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans CGD2]
 gi|221174564|gb|EEE06996.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans CGD2]
 gi|221180657|gb|EEE13060.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans CGD2M]
          Length = 373

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 80/221 (36%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I        ++  +      
Sbjct: 135 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 191

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++K+ DI+  +   T  R     + F    Y      I      +  +V+ L G  + 
Sbjct: 192 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 249

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 250 VEQGSTQETYAKTYWEPQG--VTIVPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 307

Query: 210 RPSEHVIL-PDIISKSPLA----PAIIQGDTEWYNIVSWTH 245
           R        P++  +  +       + + DT+    ++   
Sbjct: 308 RGKGFAFAGPEVKDRKTIGDGTAIGLRKEDTDLKIRINKAL 348


>gi|146311034|ref|YP_001176108.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter sp. 638]
 gi|145317910|gb|ABP60057.1| L-arginine-binding protein [Enterobacter sp. 638]
          Length = 243

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 73/218 (33%), Gaps = 16/218 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++     F  + A+    GFD+D  +AL   +  D     +          AL+ 
Sbjct: 22  KISFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPALKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T   + S  ++F    Y +    I  K     S ++L G  I ++ GT
Sbjct: 79  KKYDAVISGMDITP--DRSKQVSFTDPYYANSAVVIAKK-DTYKSFAELKGKRIGMENGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L D           + ++  +      +  R D   GD + +     T   P   
Sbjct: 136 THQKYLQDQHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLG 189

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248
                +         L  A+   +      ++    A+
Sbjct: 190 KATEKVTDAQYFGTGLGIAVRPDNKALLEKLNGALKAI 227


>gi|16262713|ref|NP_435506.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
 gi|14523339|gb|AAK64918.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
          Length = 272

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M          +  +  ++   NA           L+ G+      F    ++G  +G+D
Sbjct: 4   MKNWQTSLTGLITAVLLSAAPANADT---------LRVGMECTYAPFNYRTSDGKLEGYD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +S  I  D    +Y+         AL + + D++  +   T  R+    + F  
Sbjct: 55  VDVAKGISEIIGVD---FEYVCQEWDGMIPALLANKFDLIIASMSITDKRKE--QIDFSS 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------LSGASICVQAGTTTELTLADYFKAHNMKYH 172
                    +    K +               G  I V+  +T      ++F A   K  
Sbjct: 110 PYRNSVGRIVGPVGKDLKLFDDKGQPVVGNFDGLRIGVERASTYF----EWFSAKLPKAD 165

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------L 226
            ++++  E +    +  R D    +    +   L+ +   ++  +       P      +
Sbjct: 166 LVLYDSNEAMYLDLKNGRVDVIMTNPMKAHLSFLSGEGKGKYEFIG-PEVNEPKFFGPGV 224

Query: 227 APAIIQGDTEWYNIVSWTH 245
              + +G+ E  + +S   
Sbjct: 225 GVGLRKGNDELRDKISAAI 243


>gi|325684796|gb|EGD26948.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 270

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 26/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49
           M K     +  L +    +     S              ++  +G L  G+      ++ 
Sbjct: 1   MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G   GF+VD  +A++  +       +++P         L S + D++  N   T  
Sbjct: 61  R-KSGKLTGFEVDLGKAVAKKLGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+      F     +     I  K   ++ +SQ+ G       GT     +         
Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227
           K   +         +  R  R D       A YA    ++   +  +        P  ++
Sbjct: 169 KGTIVPSGDFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227

Query: 228 PAIIQGDTEWYNIVSWTH 245
               + +T+     +   
Sbjct: 228 ALFNKKNTKLLAKFNKAL 245


>gi|294635976|ref|ZP_06714418.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Edwardsiella tarda ATCC 23685]
 gi|291090705|gb|EFE23266.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Edwardsiella tarda ATCC 23685]
          Length = 257

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L L +L  ++ + + +    I+  G +K G       +    A+G   GFD
Sbjct: 1   MMKTTARALLALTLLSGSALAQSGNERAAIQAAGSIKFGTEGTYPPYTYHDASGKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA+++ +   P  I+            L +K+ D +      T  R+     AF  
Sbjct: 61  VDIARAVAAKMGVKPEFIEGR---WDGLIAGLSAKRYDAVINQVGITPERQA--KFAFSD 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I S + L       Q+ T+    LA  + A       +  +  
Sbjct: 116 PYITSKAVLIVRDNNAQIKSFADLRDQK-AAQSLTSNYAKLAQKYGA-----ELVPTDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R  A   D  +    +          ++      +  A  + +   +   
Sbjct: 170 NQSLELVISGRAAATLNDNLSYLDFRQHKPNAP-LKVVAVAEQGADSAILVRKDQPQLVQ 228

Query: 240 IVSWTH 245
            ++   
Sbjct: 229 ALNQAL 234


>gi|168179725|ref|ZP_02614389.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
 gi|182669265|gb|EDT81241.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
          Length = 272

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S +  IK+ G L  G       +  
Sbjct: 1   MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEESKVDKIKESGKLVVGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +DI+    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  I Y   Q  ++  +      S+ +  G  I VQ GTT E    +  
Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           K            +V ++    +  + D    +     +       
Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217


>gi|28378733|ref|NP_785625.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254556936|ref|YP_003063353.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308180925|ref|YP_003925053.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28271570|emb|CAD64475.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254045863|gb|ACT62656.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308046416|gb|ADN98959.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 507

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 30/262 (11%)

Query: 1   MYKDF--FVSILCLIILFFTS------FSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49
           M K F  F++I+  +I+               + L  I+K+G L  G +     +     
Sbjct: 17  MKKRFGWFLAIIVALIMTVVPLGQTQHAQAADNSLEQIQKKGVLVMGTSPDYPPYEFQAT 76

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V       G DV   + ++  +      ++   ++     +ALQ+ ++D++    + T  
Sbjct: 77  VNGKSKIVGMDVQIGKQVAKDLGVK---LKIKSMSFDSLLVALQTGKVDMIISGMNPTPS 133

Query: 110 REISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R     + F  + Y  G   +++K       + +     ++  Q GTT    +      +
Sbjct: 134 RRK--NVDFTHVYYQGGYDIVINKTDKGKYKNKNSFKNGTLGAQTGTTQYNAV-----KN 186

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISK 223
                        ++  A ++H+ D    +  +  A    N      PS+  +     S 
Sbjct: 187 QTTAKAKGMTSQSDLILALQSHKVDGVAMEKPSAEAYVANNKSLVAIPSDFNMSSSATSS 246

Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245
           +    A  +G T   N V+ T 
Sbjct: 247 A---IAFRKGSTSLVNKVNKTV 265


>gi|310778141|ref|YP_003966474.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747464|gb|ADO82126.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 244

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 86/239 (35%), Gaps = 20/239 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++ ++++   +           +++  +  G N     F  +  +G   GFD
Sbjct: 1   MKKFLNILLILVMLVSLAACGG-----KKEEEKTVIHIGTNAEFPPFEYL-EDGKITGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++        +I+   ++      ALQSK++D++         R+    + F  
Sbjct: 55  MDLIKEIAKE---SQLEIKIEDMSFDGLLPALQSKKVDVVIAGMTANEERKK--AVNFTS 109

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  ++ +    I+S   L G  + V  G T +L +++         +   +   
Sbjct: 110 PYYTASQVIVVKEGDSSINSFDDLKGKKVGVMLGFTGDLVVSEI-----EGVNIERYNAA 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                + ++ + DA   D          N+      I     ++   A A+ + D E  
Sbjct: 165 YAGIMSLQSGKVDAVVLDSEPAKNYVEKNEG---LAIAKADAAEEEYAIAVRKEDKELL 220


>gi|119511878|ref|ZP_01630977.1| glutamine-binding protein of glutamine ABC transporter [Nodularia
           spumigena CCY9414]
 gi|119463446|gb|EAW44384.1| glutamine-binding protein of glutamine ABC transporter [Nodularia
           spumigena CCY9414]
          Length = 236

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 93/233 (39%), Gaps = 13/233 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +A+ + +I++RG+L   +   L        +G+ +G ++D  + L+  +      +++ 
Sbjct: 2   ASAAQMPEIQRRGYLTIAVKDNLRPLGFRDVDGNLQGLEIDLAKRLALDLLGKADAVRFQ 61

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+  ++R   + + ++D+       T  R     ++F    YFDG   +      +S +S
Sbjct: 62  PVANRDRLSVVLNNKVDLAIARVTATESRARL--VSFSVPYYFDGTLIVTKDAC-VSQLS 118

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+   I V   ++T   +  Y          +  +  +E  +    +   A+  D S L
Sbjct: 119 DLANRKIAVIKNSSTIAQVRYYVPKA----ELVGVDSYQEGRSLTENNTVVAFAADASVL 174

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHYAMVTAE 252
                      ++ +LP  +S  PL+  + +     +    V+    A  TAE
Sbjct: 175 SGWVQQYP---QYRLLPTKLSTEPLSVVMPKGLQYDQLRRQVNEAI-AKYTAE 223


>gi|53718673|ref|YP_107659.1| histidine-binding periplasmic protein precursor [Burkholderia
           pseudomallei K96243]
 gi|53725151|ref|YP_102514.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|67639861|ref|ZP_00438691.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei GB8 horse 4]
 gi|121601374|ref|YP_992328.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei SAVP1]
 gi|126448544|ref|YP_001081123.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|126452224|ref|YP_001065375.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|166999938|ref|ZP_02265767.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei PRL-20]
 gi|167718616|ref|ZP_02401852.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei DM98]
 gi|167814779|ref|ZP_02446459.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 91]
 gi|167851715|ref|ZP_02477223.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei B7210]
 gi|167900312|ref|ZP_02487713.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 7894]
 gi|167908464|ref|ZP_02495669.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|242315039|ref|ZP_04814055.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1106b]
 gi|52209087|emb|CAH35028.1| histidine-binding periplasmic protein precursor [Burkholderia
           pseudomallei K96243]
 gi|52428574|gb|AAU49167.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|121230184|gb|ABM52702.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei SAVP1]
 gi|126225866|gb|ABN89406.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|126241414|gb|ABO04507.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|238520469|gb|EEP83929.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei GB8 horse 4]
 gi|242138278|gb|EES24680.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1106b]
 gi|243064056|gb|EES46242.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei PRL-20]
          Length = 258

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 77  ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  + ++   
Sbjct: 193 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 233


>gi|330949981|gb|EGH50241.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae Cit 7]
          Length = 260

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 87/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G++   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGLTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGVSTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ A   + R DA   D+       L +   +++     +   +  +  A  I +G+ E
Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPVDSELLPAKTAIGIAKGNKE 225

Query: 237 WYNIVSWTHYAM 248
              ++     AM
Sbjct: 226 LKALLDKGIKAM 237


>gi|161521540|ref|YP_001584967.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189352290|ref|YP_001947917.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221197222|ref|ZP_03570269.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
 gi|221203894|ref|ZP_03576912.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221210913|ref|ZP_03583893.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
 gi|160345590|gb|ABX18675.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189336312|dbj|BAG45381.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|221169869|gb|EEE02336.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
 gi|221176060|gb|EEE08489.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221183776|gb|EEE16176.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
          Length = 257

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 19/219 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  I +   +           K    ++ G++     F    A+G   GFD
Sbjct: 1   MKKLVLSVALACIAVGAHA-----------KDWSTIRFGVDASYPPFESKDASGKVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    + + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 50  VDLGNEICARL---KAKCVWVENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  S   L G S+ V+ GT  E     Y+         + ++  
Sbjct: 105 KLFNTPTRLVAKKGAGLQPSAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           + +     + R DA   D        L   R +      
Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADLGFLKTPRGANFAFAG 201


>gi|315635185|ref|ZP_07890463.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Aggregatibacter segnis ATCC 33393]
 gi|315476147|gb|EFU66901.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Aggregatibacter segnis ATCC 33393]
          Length = 259

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 81/262 (30%), Gaps = 21/262 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K  F ++L L  L     +      I   ++K   L  G       F     +G   G
Sbjct: 1   MKKSIFANVLLLSGLALGVATQTIAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   A++  +      IQ+        +  L +K+ D+++  T      E      +
Sbjct: 61  FDVEVIEAVAQRLG---LTIQFNETQWDSMYAGLNAKRFDLIANQT--NPSPERLKKYLY 115

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +     +  +    I +   L G     Q+ T+    +A    A       IV +
Sbjct: 116 TAPYNYSTAVIVTKEDDNSIKTFEDLKGKK-AAQSLTSNYGKIAKANGA-----ELIVVD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            + +        R +    D  A+             + +     K P   A+++G+   
Sbjct: 170 GLAQALKLITQDRAETTVNDHLAVLDYFKKQPNAGLKIAVK-RDEKVPSGFAVLKGEEPL 228

Query: 238 YNIVSWTHYAMVTAEELGITQK 259
              ++         EEL     
Sbjct: 229 IEKINQAL------EELRKDGT 244


>gi|300768251|ref|ZP_07078156.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|300494315|gb|EFK29478.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
          Length = 491

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 30/262 (11%)

Query: 1   MYKDF--FVSILCLIILFFTS------FSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49
           M K F  F++I+  +I+               + L  I+K+G L  G +     +     
Sbjct: 1   MKKRFGWFLAIIVALIMTVVPLGQTQHAQAADNSLEQIQKKGVLVMGTSPDYPPYEFQAT 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V       G DV   + ++  +      ++   ++     +ALQ+ ++D++    + T  
Sbjct: 61  VNGKSKIVGMDVQIGKQVAKDLGVK---LKIKSMSFDSLLVALQTGKVDMIISGMNPTPS 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R     + F  + Y  G   +++K       + +     ++  Q GTT    +      +
Sbjct: 118 RRK--NVDFTHVYYQGGYDIVINKTDKGKYKNKNSFKNGTLGAQTGTTQYNAV-----KN 170

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISK 223
                        ++  A ++H+ D    +  +  A    N      PS+  +     S 
Sbjct: 171 QTTAKAKGMTSQSDLILALQSHKVDGVAMEKPSAEAYVANNKSLVAIPSDFNMSSSATSS 230

Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245
           +    A  +G T   N V+ T 
Sbjct: 231 A---IAFRKGSTSLVNKVNKTV 249


>gi|255092798|ref|ZP_05322276.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile CIP 107932]
          Length = 254

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 10/245 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
            +  L  +   S   N       K+    +  G +   V    +   GD  GFDVD  + 
Sbjct: 1   MLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEKGDTVGFDVDLAKE 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREISLGLAFRPITYFD 125
               +     ++++ P++   +   L   + +D+L      T  R+    +++      +
Sbjct: 61  TFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKKI--VSYTEPYLQN 115

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEID 183
            Q  +      I+S + L    +  Q G+T    +     F        P++++  ++  
Sbjct: 116 KQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKAL 175

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R  A  GD   +    +      ++ +L D         A  + + E    ++ 
Sbjct: 176 RDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVATSKENPELCEKINK 234

Query: 244 THYAM 248
           T   M
Sbjct: 235 TLKEM 239


>gi|283770942|ref|ZP_06343834.1| polar amino acid ABC transporter inner membrane subunit
           [Staphylococcus aureus subsp. aureus H19]
 gi|283461089|gb|EFC08179.1| polar amino acid ABC transporter inner membrane subunit
           [Staphylococcus aureus subsp. aureus H19]
          Length = 485

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQAWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFKEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|271963751|ref|YP_003337947.1| glutamine ABC transporter glutamine-binding protein
           [Streptosporangium roseum DSM 43021]
 gi|270506926|gb|ACZ85204.1| glutamine ABC transporter (glutamine-binding protein)
           [Streptosporangium roseum DSM 43021]
          Length = 269

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 5/215 (2%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
                  GI     G  + + +G +KGFDVD  + ++  +     K+++    +  R   
Sbjct: 26  DSDKFVVGIKFDQPGLGQKQPDGSFKGFDVDVAKYVAKELGYTGDKVEFKEAISANRESF 85

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150
           +Q  Q++I+      T  R+  +G  F       GQ  +       I+SV  L    +C 
Sbjct: 86  IQQGQVNIVIATYSITDDRKKKIG--FAGPYLVTGQDILTRADDTTINSVDDLKDKKVCG 143

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G+++   L D F       +    +            + DA + D + L      +  
Sbjct: 144 AQGSSSPKRLVDKFGDAWKGQYLTEQQGYGACLPLLENKQVDAISTDATILAGFATQS-- 201

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           P +  ++    S+      +   D +    ++   
Sbjct: 202 PGKFRLVGKPFSEEKYGIGVKLDDKDTREKLNAAV 236


>gi|209546609|ref|YP_002278527.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537853|gb|ACI57787.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 257

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 85/254 (33%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M       +     L  ++ +  A           ++ G+ N     F    A+G+W G+
Sbjct: 1   MK--LLPMLFAGAALALSAVTAQA----------EVRFGVMNESYPPFFAKDASGEWHGW 48

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+ + +     K   + ++      ALQSK+ D++  +   T  R     + F 
Sbjct: 49  EIDLMNAVCTEM---KEKCSIVDISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 103

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K +   ++   + G +I +Q  T        YF           ++ 
Sbjct: 104 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFANA---AEEKTYQT 160

Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           ++E      + R D   GD  AL   LK    +     +      K  L   +  G  + 
Sbjct: 161 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEILGAGVSGGLRKE 220

Query: 238 YNIVSWTHYAMVTA 251
              +     A + A
Sbjct: 221 DTELKAKLNAAIAA 234


>gi|299066293|emb|CBJ37477.1| putative cystine transporter subunit; periplasmic-binding component
           of ABC superfamily (fliY) [Ralstonia solanacearum CMR15]
          Length = 267

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 14/233 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                  +A  L +I+K G ++  I      F  + A+   +G+D+D    L+  +    
Sbjct: 23  LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGADLKLQGYDIDMANLLAKELGVKA 82

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +    + +  R   L + ++D++  +      R     + F        +     K  
Sbjct: 83  ELVP---VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDV 137

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I + + L+G +I V  G+T +L L     A         +E       +Y   +    T
Sbjct: 138 SIKTPADLAGKTIGVTRGSTEDLALTAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 194

Query: 196 GDISALYA--LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                  A   +    +      + D     P    + +G+      V+    
Sbjct: 195 LGNIVANAVNERTRLRQLDVKFPVEDT----PCYVGVAKGEPALLEKVNAAIT 243


>gi|325128657|gb|EGC51525.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria meningitidis N1568]
          Length = 268

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              +   N     F  + + G+ +GFDVD   A++ A      KI++        F AL 
Sbjct: 37  KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFSALN 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +   D++      T   +    + F    +   Q  ++ K K ISS   L     + V  
Sbjct: 94  NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKKMSKVGVVT 151

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211
           G T + +++      N       FE V  I         D+   D + +      N  + 
Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + V LPD  +      A+ +GD     +++     +  + E  
Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252


>gi|315929488|gb|EFV08683.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           PEB1 [Campylobacter jejuni subsp. jejuni 305]
          Length = 168

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 2   YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K      +      + F++ +     L  IK +G L  G+   +  +A +  A G+ KG
Sbjct: 4   RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  + L+ +I  D  KI+ + +NAK R   L +  +D +      T  R+      F
Sbjct: 64  FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
               Y D  G ++ K+K   S++ + GA+I V    TT+  + +  K
Sbjct: 122 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAK 168


>gi|241913538|pdb|3HV1|A Chain A, Crystal Structure Of A Polar Amino Acid Abc Uptake
           Transporter Substrate Binding Protein From Streptococcus
           Thermophilus
 gi|241913539|pdb|3HV1|B Chain B, Crystal Structure Of A Polar Amino Acid Abc Uptake
           Transporter Substrate Binding Protein From Streptococcus
           Thermophilus
          Length = 268

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 8/227 (3%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           F+T         K   +K G +   V     + +G + GFD+D   A+      D   ++
Sbjct: 7   FATQKDQWQTYTKEKKIKIGFDATFVPXGYEEKDGSYIGFDIDLANAVFKLYGID---VE 63

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +  ++   +   L++  ID++      T  R+      F      + Q  +  K  GI S
Sbjct: 64  WQAIDWDXKETELKNGTIDLIWNGYSVTDERK--QSADFTEPYXVNEQVLVTKKSSGIDS 121

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFERVEEIDAAYRAHRCDAYTG 196
           V+  +G ++  QAG++         K           + +    +      + R D    
Sbjct: 122 VAGXAGKTLGAQAGSSGYDAFNASPKILKDVVANQKVVQYSTFTQALIDLNSGRIDGLLI 181

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           D          +    ++ + P        A    + D      ++ 
Sbjct: 182 DRVYANYYLEKSGVLDQYNVXPAGYEGESFAVGARKVDKTLIKKINQ 228


>gi|219872121|ref|YP_002476496.1| amino acid ABC transporter substrate-binding [Haemophilus parasuis
           SH0165]
 gi|219692325|gb|ACL33548.1| amino acid ABC transporter, substrate-binding protein [Haemophilus
           parasuis SH0165]
          Length = 260

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 12/212 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K   +  L L  +F ++ +    S+L  I  +G +  G       F    A+G   G+
Sbjct: 1   MFKKLSIVALSLAAVFTSTAALAKESLLDRINNKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L+ ++ DI++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKGERFDIVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   +       +S    + G     Q  ++    LA    A       +  + 
Sbjct: 117 AEYSWSGAMLLARNDETRVSKAEDVKGLK-AAQTLSSNYGELAQKNGA-----ELVAVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + +     +  R D    D  AL      N  
Sbjct: 171 MAQALLLLQQKRADVTFNDSLALLDYLKKNPN 202


>gi|167580215|ref|ZP_02373089.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis TXDOH]
 gi|167618324|ref|ZP_02386955.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis Bt4]
          Length = 258

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD    +   I    +K  + P +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLANEVCKRI---NAKCTWTPQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + SV  L G  + 
Sbjct: 77  ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLLPSVESLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDEFQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  N ++   
Sbjct: 193 RGKGFAWAG-PAVKDPKTLGDGTAMGLRKDDADLKNAINRAL 233


>gi|115360206|ref|YP_777344.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria AMMD]
 gi|115285494|gb|ABI91010.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 257

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 24/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L  +   + + + S          ++ G++     F    A+G   GFD
Sbjct: 1   MKK--LALSIALACIAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    + + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 50  VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   +  +   L G S+ V+ GT  E     Y+         + ++  
Sbjct: 105 KLFNTPTRLVSKKGAHLQPTAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQIVSYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           + +     + R DA   D        L   R +        I       +     + + D
Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADLGFLKTPRGANFEFAGKDIDDPKTLGNGAGIGLRKDD 222

Query: 235 TEWYNIVSWTHYAMV 249
            +    +      ++
Sbjct: 223 ADLKAKIDHAIADII 237


>gi|253583645|ref|ZP_04860843.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
 gi|251834217|gb|EES62780.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
          Length = 244

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 23/249 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L+ +  +            K+   L  G N     F  +  NG   GFD
Sbjct: 1   MKKLFCAVMLLLMGIVGSVSFA--------KENKTLYVGTNAEFQPFEYL-ENGKIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  I  D   I++  +       ALQ+K++D++      T  R+    + F  
Sbjct: 52  VELMEEIAKLIGKD---IEWKNIAFDGLLPALQAKKLDVIIAGMTATEERKKF--VNFSQ 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  +++K+  +      L+G S+ V  G T ++ ++              +   
Sbjct: 107 TYYTSNQMILINKENPVVESFDKLAGYSVGVILGYTGDIAVSAI-----EGVKVQRYNGA 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +A + DA   D S         ++  E  ++   ++K   A A+ + +    +
Sbjct: 162 AEAIMALKAKKVDAVVLD-SEPAKNYAKQNK--ELGLINTDVAKEEYAIAVGKDNKALAD 218

Query: 240 IVSWTHYAM 248
            +      +
Sbjct: 219 EIDKALKVL 227


>gi|170690739|ref|ZP_02881905.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170143988|gb|EDT12150.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 250

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 85/260 (32%), Gaps = 29/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+  +    LF ++ +              L  G +T  + F   + +  + GFD
Sbjct: 1   MVRRVFLMSVVAAALFGSALARA--------DTKELVVGTDTSFMPFEFKQGD-KYVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +       +  P++      ALQ++ ID+          R     + F  
Sbjct: 52  LDLWAEIAKDLGWKY---KVQPMDFSGLIPALQTQNIDVALSGMTIKEERRK--AIDFSD 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I S+  L+G  I  + GT T     D+ KAH        F  +
Sbjct: 107 PYYDSGLAAMVQSGNTSIRSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++   A  A R DA   D   +     T  +     +    +S         +G      
Sbjct: 163 DQAYLALEAGRVDAAMHDTPNVLYFASTAGKGKV-KVAGTPVSGDKYGIGFPKGSP---- 217

Query: 240 IVSWTHYAMVTAEELGITQK 259
                  A V AE   +   
Sbjct: 218 -----LVASVNAELAKMKAD 232


>gi|170761710|ref|YP_001786801.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169408699|gb|ACA57110.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 268

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 20/257 (7%)

Query: 1   MYKD-----FFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEV 50
           M K       F+ +  +          N+S         IK +G L  G+      F   
Sbjct: 1   MSKKKILSVLFIVVCTISFTLVGCGQKNSSDGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G+ +GFDVD  + L   +     K++      +     +     D+L         
Sbjct: 61  NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
            E ++  +       D    +      I +   L G  + VQ  T++E  +       + 
Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNSIHNKDDLKGKVVGVQTSTSSEQVV----DKLDG 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 + R  E     + +R DA      A  A  + + +     I+   +  S +   
Sbjct: 173 INEIKRYNRNPEALIDLKNNRIDAVVVG-YAYAATAMKDKKDDNLKIINSPVGSSDIVMV 231

Query: 230 IIQGDTEWYNIVSWTHY 246
             +G       ++    
Sbjct: 232 TKKGSDNLTKELNKALK 248


>gi|254249735|ref|ZP_04943055.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           cenocepacia PC184]
 gi|124876236|gb|EAY66226.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           cenocepacia PC184]
          Length = 260

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 88/255 (34%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ S  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGSAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   I    +K  ++  +      AL++++ D +  +   T  R   +   F  
Sbjct: 53  VDLGNEICRRI---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARAEQIA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +   L G S+ V+ GT  E     ++ +     + + ++  
Sbjct: 108 KLFNTPTRLVTKKGAGLQPTAESLKGKSVGVEQGTIQETYAKAHWASKG--VNIVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233
           +++ A   + R D    D        L   R +            P          + + 
Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGK-DLDDPKTLGNGAGIGLRKE 224

Query: 234 DTEWYNIVSWTHYAM 248
           DT+    +      M
Sbjct: 225 DTDLKAKIDGAIAGM 239


>gi|148653872|ref|YP_001280965.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
 gi|148572956|gb|ABQ95015.1| extracellular solute-binding protein, family 3 [Psychrobacter sp.
           PRwf-1]
          Length = 280

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 72/266 (27%), Gaps = 18/266 (6%)

Query: 2   YKDFFVSILCLIILFFTSF-----STNASI--LGDIKKRG-FLKCGINTGLVGFAEVKAN 53
              + V  + L  L   +        +A           G  ++    +     +   A+
Sbjct: 8   KSKWAVLSMALSGLMLAACNNSQAPADAETGAAEAADSAGQTIRIATESSYKPLSYTDAD 67

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF++D   AL   +    +K              LQ+K+ D +      T  R   
Sbjct: 68  GKLIGFEIDLIHALCDEM---KAKCDISSQEWDGLIPGLQAKKFDAIIAGMSITPER--L 122

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F      +G   +  K + +S     S   +  Q  T     +             
Sbjct: 123 EKVDFTDPYLNNGLILVAKKGENVSVKDDFSNIPVGAQRATIAAQYIEASHPEAK----V 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +++  E       + R  A   D         + +  +      +  S   +  A+ +G
Sbjct: 179 SLYDTQENAYLDLTSGRIRALFSDKVTAAYWLTSEEGKAFEQKGEEFNSDDAMGIAVRKG 238

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
                   +    A+  + +      
Sbjct: 239 -DALAGKFNQALAAIKESGKYDEISA 263


>gi|330970981|gb|EGH71047.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 260

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 93/276 (33%), Gaps = 29/276 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +     K +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVKCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +++ +   + R DA   D+       L +   +++ +   I             D+E   
Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPI-------------DSELLP 212

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
             +    A    E   +  K I  + KD T  ++Q+
Sbjct: 213 AKTAIGIAQGNKELKALLDKGIEAMHKDGTYAEIQK 248


>gi|315504693|ref|YP_004083580.1| extracellular solute-binding protein family 3 [Micromonospora sp.
           L5]
 gi|315411312|gb|ADU09429.1| extracellular solute-binding protein family 3 [Micromonospora sp.
           L5]
          Length = 301

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 14/237 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
            +  A +   IK  G +  G ++       +  +G    GFDV+   A+++ +       
Sbjct: 48  AALAAKVPDAIKSDGKIVVGTDSTYAPAEFLDTDGKTVIGFDVELFTAVAAKLGLKAE-- 105

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++     +    + S + +    +      R+    +      +  G  ++  K     
Sbjct: 106 -FVSAPFGDIINGVNSGKYEAGVSSFTINDDRKGQANM---VSYFQVGTQWVTKKGNPAG 161

Query: 139 SVSQL-SGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                  G  I VQ  T     +         A         F   +   AA  + + DA
Sbjct: 162 VALDNACGKKIAVQKDTVQVEDIQKRSKACTDAGKPAITIDQFPGQDAATAAVVSGKDDA 221

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D          ++      +L      +P    + +  T+    V     A++ 
Sbjct: 222 MLADYPVGVYAVTQSND--ALELLDKQYEAAPYGYVLAKEQTQLAEAVRDATKAVIA 276


>gi|171740989|ref|ZP_02916796.1| hypothetical protein BIFDEN_00051 [Bifidobacterium dentium ATCC
           27678]
 gi|171276603|gb|EDT44264.1| hypothetical protein BIFDEN_00051 [Bifidobacterium dentium ATCC
           27678]
          Length = 270

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 20/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K   V+I  + I+ F +  ++        L  IK+ G +  G       F+   A+   
Sbjct: 9   KKFVTVTIAAISIIGFGACGSSNNSSSVGELDQIKENGEIVFGTEGTYAPFSYHDADDKL 68

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DV+   A++  +       +++  N       + +K+ D ++         E     
Sbjct: 69  TGYDVEVATAVAKELGVKA---KFVEANWDSLLAGVDAKKFDTVADQVA--PSDERKQKY 123

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F  +  +     +  K    I + + + G +      +    T  +         + + 
Sbjct: 124 DFTDLYTYSQGVAVTKKGNDDIKTFADIKGKNAAETKTSNWNQTAQE------NGANIVS 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA-IIQGD 234
                +   A  + R  A       L  L     +P   V +      SP A   I +G+
Sbjct: 178 VNDFAQAVDAITSGR--AEVTLNDKLAVLDYLKQKPDAEVQISAKSEVSPAAAFPIRKGE 235

Query: 235 TEWYNIVSWTH 245
            +    V+   
Sbjct: 236 DDLVKAVNDAL 246


>gi|290957467|ref|YP_003488649.1| extracellular binding protein [Streptomyces scabiei 87.22]
 gi|260646993|emb|CBG70092.1| putative extracellular binding protein [Streptomyces scabiei 87.22]
          Length = 321

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 79/258 (30%), Gaps = 20/258 (7%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
               +       +   ++ +G +  G +          A+G   G D+D   A+   +  
Sbjct: 46  SASTSGAPLAGKLPASVRDKGVINVGSDIAYAPVEFKDASGKVVGLDLDIAAAMGKQLGV 105

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITY 123
           D    ++           L +K+ DI       T  R+  +          G+ F    +
Sbjct: 106 D---FKFQNATFDTLIGGLAAKRYDIAMSAMTDTKDRQEGIDSDTGKKVGAGVDFVD-YF 161

Query: 124 FDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY----HPIVFE 177
             G     +K   +GI +   L G +I VQ  T +     D  K              F 
Sbjct: 162 TAGVSLYTNKGDDQGIKTWDDLCGKTIAVQRNTFSHDLAKDQAKKCKDDKKGALKIEDFA 221

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E +   R+   D  + D         T+       I+ D +   P   A+ +  TE 
Sbjct: 222 TNPEAETRMRSKGADVVSADFPVAAYSVKTSGGGKYFEIVGDQVEAGPYGIALAKDSTEL 281

Query: 238 YNIVSWTHYAMVTAEELG 255
            + +     A++   E  
Sbjct: 282 RDALKAAVQAIIDNGEYE 299


>gi|254504719|ref|ZP_05116870.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
 gi|222440790|gb|EEE47469.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
          Length = 262

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 96/242 (39%), Gaps = 10/242 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F       +       +  ++ L DI   G +K         F  + A+G+++G+D
Sbjct: 1   MLKRFAGLAGAAMAAVMLLAAPASAELKDILAAGKIKIATPENFPPFGALGADGEYEGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   ++ +P+ +K+R   L++ ++D++         R     + F  
Sbjct: 61  IDVAKMIAEDLGVE---LELVPVTSKQRIPFLETDRVDLVIATLGANPERAK--SIWFSH 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  G        +SS++  +G  I V  GT  +L + +           I F    
Sbjct: 116 AYAPFFSGAFAKPDVAVSSIADFAGKKIAVTGGTLEDLAITEDAP---DGAEIIRFGDNA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              AAY + + D        + AL ++ND P  ++    II+ SP    +  G+ +    
Sbjct: 173 ATIAAYVSGQADVIVTGN--MVALGISNDNPEFNLEPKFIIANSPSFIGVKTGNMDLLQW 230

Query: 241 VS 242
           V+
Sbjct: 231 VN 232


>gi|16331484|ref|NP_442212.1| hypothetical protein sll0064 [Synechocystis sp. PCC 6803]
 gi|1001140|dbj|BAA10282.1| sll0064 [Synechocystis sp. PCC 6803]
          Length = 275

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 96/267 (35%), Gaps = 17/267 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           ++++     L   +     ++L  + + G L+ G  T  V F    ANG+ +G+ VD   
Sbjct: 9   WLALTFTTGLVAIAPVQAETVLERVARTGELRAGTRTDAVPFGFEMANGEMEGYGVDLMA 68

Query: 66  ALS---SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            ++   +        +    ++ + RF A+ S ++DI+   T  T   +    + F    
Sbjct: 69  LIALKLAEEMGKTITVDLDRVDLQSRFEAIASGELDIVCEATTITQ--DRLELVDFSAPF 126

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +  G  F+M +      +    L G  I     TTT   +   +         +  +  E
Sbjct: 127 FISGAKFLMKQGSVEGFNINGTLEGIPIAYIQNTTTFDIIPKIYPLAQW----VPVQDRE 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILP-DIISKSPLAPAIIQGDTEWY 238
           E  A     +  A   D   L    L     P+E+ + P   I+    A  + QGD +W 
Sbjct: 183 EGIAKLDGGQVKAVVSDGILLVGELLKQGKNPAEYALGPYQPITTELYACILPQGDGDWK 242

Query: 239 NIVSWTH----YAMVTAEELGITQKNI 261
             V           +  E   I Q N+
Sbjct: 243 RFVDEVISSTENHDLLQEWFNIDQTNV 269


>gi|325526717|gb|EGD04237.1| periplasmic solute-binding protein [Burkholderia sp. TJI49]
          Length = 260

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 75/252 (29%), Gaps = 23/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L L  L   + +   S +        ++ G++     F    A+G   G D
Sbjct: 1   MNIKRLGMLLTLCALSTAASAQATSDI--------VRIGVDPNFPPFEFKSADGRLTGLD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   I       +++  +       L +K+ DI+      T  R   +   F  
Sbjct: 53  IDLGNAICQDIGVK---CEWVEHDFDHIIPGLNAKKFDIILSAMIATEDRRKVM--DFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I     G+      L G  + V  GT  E  +         K   I +   
Sbjct: 108 TLYHIPVAMIAATTSGLMPTGDSLRGKRLGVTKGTALEAYVK---GKWGSKAEVIAYPTD 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            ++  A  + + DA   D +      LT                        +A  I + 
Sbjct: 165 AQLYDALASGKIDAAIQDKAQAEYFFLTKPAGQNFAFTGPDDFDDARLKNDDVAIGIRKD 224

Query: 234 DTEWYNIVSWTH 245
           D +  + ++   
Sbjct: 225 DAQLKDRINKAI 236


>gi|116686709|ref|YP_839956.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|116652424|gb|ABK13063.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 268

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 85/245 (34%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + +  ++    +I  F +   +A  L  I K G L+  +      F  V  +   +G+D
Sbjct: 10  RRTWLAALFAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+ ++      ++ +P+N+  R   L + ++D++  +   T  RE    + F  
Sbjct: 70  IDMAGLLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 QG        +S+ + L+G ++    G   E+ L+              FE   
Sbjct: 125 AYAPYFQGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + +            A+      P     +  +I  SP    + + +      
Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238

Query: 241 VSWTH 245
           +    
Sbjct: 239 IDDAI 243


>gi|71737078|ref|YP_273645.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71557631|gb|AAZ36842.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320325647|gb|EFW81709.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327070|gb|EFW83084.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 260

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 87/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       + L         + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSAVALCL------AAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G ++    L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADKASLKGKTVGYEQGTIQEAYAKAALDKAGVSTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ A   + R DA   D+       L +   +++     +   +  +  A  I +G+ E
Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAKGNKE 225

Query: 237 WYNIVSWTHYAM 248
              ++     AM
Sbjct: 226 LKALLDKGIKAM 237


>gi|304389301|ref|ZP_07371266.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304327419|gb|EFL94652.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 310

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 17/254 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL-----GDIKKR--GFLKCGINTGLVGFAEVKAN- 53
            K   V+    +          AS        ++ K        G +     +       
Sbjct: 39  KKIVSVAAGLALAFSLAGCGGAASNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKT 98

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G++ GFD+D    ++     +   ++  P++   + + L S  +D L          +  
Sbjct: 99  GEYTGFDMDLATEVAKR---NHWTLEKKPIDWDSKDMQLSSGSVDCLWNGFTMNGREDK- 154

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKY 171
               +      +   F+      +   + L+G ++ VQA ++    L D           
Sbjct: 155 --YTWSKPYVDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFK 212

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                        +  A   DA   D+        T  +   + I+   +          
Sbjct: 213 TLNKVPDYNNAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFK 271

Query: 232 QGDTEWYNIVSWTH 245
            G+    + V  T 
Sbjct: 272 LGNKALRDQVQTTL 285


>gi|296139504|ref|YP_003646747.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
 gi|296027638|gb|ADG78408.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
          Length = 323

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 93/306 (30%), Gaps = 41/306 (13%)

Query: 6   FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            V+++   I          S      L  I + G +  G      G      +    GFD
Sbjct: 9   LVAVVIAAIAMVGGLVACGSTGPRDLLKSI-ESGSVILGTKYDQPGLGLRNPDKSMSGFD 67

Query: 61  VD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           VD      ++++ A      K ++    + +R   + + ++D+++        R  S  +
Sbjct: 68  VDVSSYVVKSIAQANGWKEPKTRWRETPSAQRETLINNGEVDMIAATYSINANR--SKKV 125

Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F        QG ++ K    I+ ++ L  G  +C  AG+T+   +    KA        
Sbjct: 126 DFAGPYLVVRQGLLVRKDDTSITQLTDLNQGKKLCSAAGSTSAQNV----KAQLPGVQLQ 181

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR---------------PSEHVILPD 219
            F+       A      DA T D S L                                 
Sbjct: 182 EFDSYSTCTEALHQKSIDALTTDESILAGFNQQYGGEFRVVDMTYIADQCIKGSQKKAGS 241

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
             S       + +G  +    ++    AM+              + K+  + + QR   I
Sbjct: 242 PFSTERYGIGLAKGQKKTQEAINAAVSAMIADGSWE------KALRKNLGDEETQRL--I 293

Query: 280 DKSSNI 285
           D++   
Sbjct: 294 DRAGGF 299


>gi|304413344|ref|ZP_07394817.1| periplasmic component/domain of ABC-type amino acid
           transport/signal transduction systems [Candidatus
           Regiella insecticola LSR1]
 gi|304284187|gb|EFL92580.1| periplasmic component/domain of ABC-type amino acid
           transport/signal transduction systems [Candidatus
           Regiella insecticola LSR1]
          Length = 246

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 87/257 (33%), Gaps = 26/257 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V IL   +    + S          ++  L    +T  V F   + + ++ GFD
Sbjct: 1   MK--LLVKILLAGLTLAFAVSAYC-------EQKKLIVATDTAFVPFEFKEGD-NYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++  +  D    Q  P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  IDLWQAIAEQLHVDY---QLKPMDFSGIIPALQTKNVDVALAGITITDDRKKV--IDFSD 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I     L G  + V+ GT +     DY K +    +   F  +
Sbjct: 106 GYYDSGLLIMVKNNNNDIKGEQDLQGKVVAVKMGTGSV----DYAKTNIKTKNLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T         +   I       A ++G +E   
Sbjct: 162 DNAYLELATGRADAVLHDAPNILYFIKTAGNDR-FKAVGAPIKAQQYGIAFLKG-SELRE 219

Query: 240 IVSWTHYAM----VTAE 252
            V+     +    + AE
Sbjct: 220 KVNQALQVLYEKGIYAE 236


>gi|257460119|ref|ZP_05625223.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268]
 gi|257442560|gb|EEV17699.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268]
          Length = 249

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 71/246 (28%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       + C +++       N+  L +    G LK         F+      +  G+D
Sbjct: 1   MKNLIKTLLACALLI----CGANSKTLRE----GVLKVATEGTFSPFSYYNDKNELVGYD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +     KI++L         A  + + D +      T  R+     +  P
Sbjct: 53  VDVARAVAEKLG---LKIEFLTAPWDAMLAAFDAGKADAVFNQVSITDERKKKYEYS-VP 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            T   G   +      I S   L G      A +           A       +  +   
Sbjct: 109 YTVVYGAIIVHKDNNDIKSFEDLKGKKNADSATSNWAQV------AKKYGAQNVTVDSFA 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +      A R D    D +  Y             I   +      A  + +G+ E  + 
Sbjct: 163 KSMELLIARRVDTVVRDNTVFYDFLKQRPDAP-IKIAAKLKDVDYSAAIVQKGNKELADQ 221

Query: 241 VSWTHY 246
           ++    
Sbjct: 222 INKALN 227


>gi|331091629|ref|ZP_08340463.1| hypothetical protein HMPREF9477_01106 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330403386|gb|EGG82945.1| hypothetical protein HMPREF9477_01106 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 253

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 94/264 (35%), Gaps = 21/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++  ++ L  T+            +   L  G   G   +  +K   +  G D
Sbjct: 3   MKKIISLALAGVVALSITACG------EKKSESDTLIVGTEAGFAPYEYMKGK-EVVGID 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++  +  +   ++   +       ++ S ++D ++        R+ ++   F  
Sbjct: 56  MDIAKAIADDMGKE---LKIKNMEFDGALASVASGKVDFVAAGVSINEKRKKTM--DFSH 110

Query: 121 ITYFDGQGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                 +  +         G  S   L+G  + VQ G   +  ++   + +        +
Sbjct: 111 EYVDSTEVIVVNGENPAISGKVSGESLNGKVVAVQQGNIADSWVS--NEENCKPKEVKRY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +  +     + ++ D    D     A KL ++   E  IL  ++ +   A A+ +G+ E
Sbjct: 169 TKFAQASEDLKNNKVDCIVMDK--YPAEKLISEN-KELKILDGVLFEDKYAIAVKKGNKE 225

Query: 237 WYNIVSWTHYAMVTAEELGITQKN 260
             + ++     ++   ++     N
Sbjct: 226 LLDKINKVIDKLIADGKIEEFTAN 249


>gi|326561453|gb|EGE11803.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 46P47B1]
 gi|326562224|gb|EGE12552.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 7169]
 gi|326567178|gb|EGE17300.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC1]
 gi|326568460|gb|EGE18540.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC7]
 gi|326573961|gb|EGE23911.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis O35E]
 gi|326574952|gb|EGE24882.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 101P30B1]
          Length = 265

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M      +     +    + S  ++                 L     +    F+ +   
Sbjct: 1   MTTVLKFTTAAFCVSLLAACSNESTTNTKTAAAPNSSTSQKELIIATESSFKPFSYLDKQ 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF++D   AL   +  D    Q +  +      +L + + D +      T  R   
Sbjct: 61  GQLVGFEIDLANALCKQMQAD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    + +    I  K     +++ ++G ++  Q  T +   L  ++   N     
Sbjct: 116 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +++ +       A R +    D+        T       +    I     +  A+ + 
Sbjct: 171 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 230

Query: 234 DT 235
            +
Sbjct: 231 SS 232


>gi|262370798|ref|ZP_06064122.1| lysine-arginine-ornithine-histidine-binding periplasmic protein
           [Acinetobacter johnsonii SH046]
 gi|262314160|gb|EEY95203.1| lysine-arginine-ornithine-histidine-binding periplasmic protein
           [Acinetobacter johnsonii SH046]
          Length = 261

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 85/259 (32%), Gaps = 24/259 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    K   +S   + +   ++           K+   ++ G  +    F     +    
Sbjct: 1   MKNWQKKLLLSTTFVAVALSSTVQA--------KEWKTIRFGTESAYAPFEYKTPDNKLV 52

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   A+ + +    +K  ++  +      AL++K+ D +  +   T  R   +   
Sbjct: 53  GFDIDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTTDRAKQIA-- 107

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y      +  K    + + + L G  + VQ GT  E     Y+       + + +
Sbjct: 108 FSNKIYNTPTRMVAKKGSPLLPTPASLKGKRVGVQQGTIQEGYAKAYWAPKG--VNVVPY 165

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAII 231
              + +     + R DA   D   + A  L + +        + +  +       A  + 
Sbjct: 166 PNQDVLYQDMVSGRLDATLQDAIMVDAGFLKSAKGKGFAFAGNNVVDAKTLGVGAAIGLR 225

Query: 232 QGDTEWYNIVSWTHYAMVT 250
           + D +    +      ++ 
Sbjct: 226 KEDADLKKNIDKALAEIIA 244


>gi|91781330|ref|YP_556537.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693990|gb|ABE37187.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 282

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 85/243 (34%), Gaps = 11/243 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + + +A  L DIK RG +  GI+     +    AN +  GFD     A++  +      I
Sbjct: 23  TVAASADTLDDIKSRGTMTVGIDPTFAPYEYTDANNNIVGFDPAILAAVAKHLGVK---I 79

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL--AFRPITYFDGQGFIMHKKKG 136
           +Y  L        L +   DI     + T  R   L                    K   
Sbjct: 80  EYQRLAFSGIIPGLLAHSFDIEGSALNVTAERAKRLAYVVPTSKTVNGALVRADFKKIPA 139

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCD 192
            +++  L+G +  V++ +  E  L  + +    K       I  + V++  AA    R D
Sbjct: 140 KATIESLAGLTAAVKSASAPEQILKQFNETLKAKGLAPITLISVDSVDQTVAALLTRRAD 199

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               DI+ L  +      PS+     ++     +A A    DT     +S    AM  + 
Sbjct: 200 FVFDDITVLAGVIKQ--NPSKLKSTGELGPSQWIALATRPDDTRLNKAISDEIIAMKKSG 257

Query: 253 ELG 255
           EL 
Sbjct: 258 ELA 260


>gi|78063225|ref|YP_373133.1| lysine/arginine/ornithine ABC transporter periplasmic-binding
           protein [Burkholderia sp. 383]
 gi|77971110|gb|ABB12489.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 257

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 24/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L  +   + + + S          ++ G++     F    A+G   GFD
Sbjct: 1   MKK--LALSIALACIAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    + + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 50  VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   +  +   L G S+ V+ GT  E     Y+         + ++  
Sbjct: 105 KLFNTPTRLVTKKGANLQPTAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           + +     + R DA   D        L   R +        I       +     + + D
Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADIGFLKTPRGANFEFAGKDIDDPKTLGNGAGIGLRKDD 222

Query: 235 TEWYNIVSWTHYAMV 249
            +    +      ++
Sbjct: 223 ADLKAKIDHAIADII 237


>gi|240081469|ref|ZP_04726012.1| Histidine-binding protein precursor [Neisseria gonorrhoeae FA19]
 gi|268597570|ref|ZP_06131737.1| histidine-binding protein [Neisseria gonorrhoeae FA19]
 gi|268551358|gb|EEZ46377.1| histidine-binding protein [Neisseria gonorrhoeae FA19]
          Length = 268

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    ++ C  +                   G + +   N     F  + + G+ +GF
Sbjct: 3   MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++ A      KI++        F AL +   DI+      T   +    + F 
Sbjct: 63  DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADIVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K +SS   L     + V  G T + +++    + N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGYTGDFSVSKLLGSDN--PKIARFES 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +GD   
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 VKMLNDALEKVRESGEYD 252


>gi|254178357|ref|ZP_04885012.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei ATCC 10399]
 gi|254199422|ref|ZP_04905788.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei FMH]
 gi|254205737|ref|ZP_04912089.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei JHU]
 gi|147749018|gb|EDK56092.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei FMH]
 gi|147753180|gb|EDK60245.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei JHU]
 gi|160699396|gb|EDP89366.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei ATCC 10399]
          Length = 324

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 86  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  + ++   
Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 299


>gi|134298595|ref|YP_001112091.1| extracellular solute-binding protein [Desulfotomaculum reducens
           MI-1]
 gi|134051295|gb|ABO49266.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 264

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 15/232 (6%)

Query: 19  SFSTNASILGDIKK--RGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75
               +       K   +  L    +     F       G + GFDV+  +AL      + 
Sbjct: 23  GCDGSEPTKEQAKDAAKPKLIAAADATFAPFEFTDPKTGKYVGFDVELIQALCDEAGYE- 81

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKK 134
             +++  +       ALQ+ QID        T  R+    + F    Y  G    +  K 
Sbjct: 82  --LEFRSMGFDGLIAALQANQIDAAVSAMTITDERKK--EVDFSDPYYKSGLVVAVQAKD 137

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I     L G  I VQ+GTT  L                 F   ++     +    DA 
Sbjct: 138 TEIKGFEDLKGKKIAVQSGTTGALQAEKITDK----DKITYFTNADQALLELKNGAVDAV 193

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             D           ++  E  ++ +I+S      A+ +G TE    ++    
Sbjct: 194 VNDFPVSAYFIQQGNK--EVKMVGEILSAEEYGIAVPKGKTETVEKLNAALK 243


>gi|70728647|ref|YP_258396.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68342946|gb|AAY90552.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 260

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 88/233 (37%), Gaps = 13/233 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                S L   K+   L+ G++     F    A+G   GFD+D   A+ + +     K +
Sbjct: 14  CMAAGSALA--KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAEL---KVKCK 68

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-S 138
           ++  +       L++ + D +  +   T  RE    + F    +     F+  K  G+  
Sbjct: 69  WVESDFDGMIPGLKANKFDGVISSMTVTPAREKV--IDFSNELFSGPTAFVFKKGSGLSE 126

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L G ++  + GT  E           +K     ++  +++ A   + R DA   D+
Sbjct: 127 DTASLKGKTVGYEQGTIQEAYAKAVLDKAGVKTQ--AYQNQDQVYADLTSGRLDASIQDM 184

Query: 199 SALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                  L + + +++     + D +  +  A  I +G+ E   ++     A+
Sbjct: 185 LQAELGFLKSPQGADYEISKPVDDPLLPAKTAVGISKGNKELKALLDKGIKAL 237


>gi|69248091|ref|ZP_00604620.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium DO]
 gi|258616182|ref|ZP_05713952.1| extracellular solute-binding protein [Enterococcus faecium DO]
 gi|293559678|ref|ZP_06676206.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1162]
 gi|293569922|ref|ZP_06681009.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1071]
 gi|294620772|ref|ZP_06699978.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium U0317]
 gi|68194565|gb|EAN09057.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium DO]
 gi|291587670|gb|EFF19547.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1071]
 gi|291599629|gb|EFF30640.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium U0317]
 gi|291606353|gb|EFF35759.1| ABC-type amino acid transport system, periplasmic component
           [Enterococcus faecium E1162]
          Length = 278

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 77/255 (30%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    +++       ++  T A     +   +++K+  L    +  L   +      +
Sbjct: 1   MKKKRLFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  + ++  +     KI +   N   +  ++  ++ D  + +   T  RE    
Sbjct: 61  LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKRESDFAANDFGITKEREKKFS 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L+      FD          GI S+  L G     +  T+         + H  K     
Sbjct: 118 LSETFKYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               ++  +     R D    D                 ++     +++     + +G+ 
Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233

Query: 236 EWYNIVSWTHYAMVT 250
                +      M  
Sbjct: 234 ALKKKIDGVLKEMKE 248


>gi|291537852|emb|CBL10963.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Roseburia intestinalis XB6B4]
          Length = 271

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 10/235 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K +  +I    +    +           ++   L  G +     +  +  +G   G DV+
Sbjct: 6   KKYIAAIGICFMALGAACIMKTDPEEVGEELPELIIG-SDNYEPYNYLDDDGKPVGIDVE 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+   +   P    +  +   ++   L + ++D L  +       +      +    
Sbjct: 65  LAEAVCEQLGYTP---VFQYIVWDKKDEYLDNGKVDCLWGSFTMNGREDEYQ---WAGPY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-VFERVEE 181
            +  Q   +     I ++S L+G  + VQA T  E  L +       +   +     ++E
Sbjct: 119 LYSRQVIAVRTDSKIRNISDLAGKRVAVQATTKPEEVLLERSDPRVPEVDMVYSLSGMDE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           I A+ R    DA TG  SAL   +   + P  + IL + +  S L  A      +
Sbjct: 179 IYASLRKGYVDAITGHESAL--ERFVGNAPDMYAILDESLYISELGVAFKNDTHQ 231


>gi|240128915|ref|ZP_04741576.1| Histidine-binding protein precursor [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268687302|ref|ZP_06154164.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-93-1035]
 gi|268627586|gb|EEZ59986.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-93-1035]
          Length = 268

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 88/258 (34%), Gaps = 11/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K    ++ C  +                   G + +   N     F  + + G+ +GF
Sbjct: 3   MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++ A      KI++        F AL +   D++      T   +    + F 
Sbjct: 63  DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +   Q  ++ K K +SS   L     + V  G T + +++    + N       FE 
Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGYTGDFSVSKLLGSDN--PKIARFES 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           V  I         D+   D + +      N  +  + V LPD  +      A+ +GD   
Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++     +  + E  
Sbjct: 235 VKMLNDALEKVRESGEYD 252


>gi|134103708|ref|YP_001109369.1| putative ABC transporter substrate-binding protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291004757|ref|ZP_06562730.1| putative ABC transporter substrate-binding protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133916331|emb|CAM06444.1| putative ABC transporter substrate-binding protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 259

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 14/256 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
              ++  +  L   +  T            + + G L    +     F      G   GF
Sbjct: 1   MLPALALVFGLAGCAQPTTGGGGTAAGGVQLIESGHLTTCTHMDYKPFQFHD-QGKIVGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++  +      +   P    +    L +++ D+ +     T +RE      F 
Sbjct: 60  DVDLVDLIARDLGVQQKIVD-TPFEGIQSGEDLNTRRCDVAAAAMSITDVRE--QNFDFS 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +   Q  +  K  G++S+  L G  + VQ  TT E    +   AH      + FE +
Sbjct: 117 DPYFEATQALLTKKGTGLNSLEALRGKKLGVQLSTTGETYANENKAAHGY--EVVQFEDL 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +  + DA   D S L           E  I  +  +       +  G+    N
Sbjct: 175 PLSVTAVQTGQIDAAINDNSVLGDFI---KNNPEVEITTEFTTGDQYGIGVATGNEALRN 231

Query: 240 IVSWTHYAMVTAEELG 255
            V+ +   M    E  
Sbjct: 232 AVNQSLKKMKENGEYD 247


>gi|170756143|ref|YP_001781581.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum B1 str. Okra]
 gi|169121355|gb|ACA45191.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum B1 str.
           Okra]
          Length = 272

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S +  IK+ G L  G       +  
Sbjct: 1   MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +DI+    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  I Y   Q  ++  +      S+ +  G  I VQ GTT E    +  
Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           K            +V ++    +  + D    +     +       
Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217


>gi|157362890|ref|YP_001469657.1| extracellular solute-binding protein [Thermotoga lettingae TMO]
 gi|157313494|gb|ABV32593.1| extracellular solute-binding protein family 3 [Thermotoga lettingae
           TMO]
          Length = 263

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 85/221 (38%), Gaps = 12/221 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A+ L +I KRG +    +   V       +G   GF ++     +  +     +I++  
Sbjct: 22  AATTLEEIVKRGKIIIATDMTSVPMQYRDPSGKPTGFTIELMELAAKYMG---VQIEWQD 78

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +  +    +L +K++D+++ N   TL R  ++   F    +  G   +  K   +     
Sbjct: 79  MAWESLIPSLLTKKVDMIAANMSMTLTRLKTIR--FSEPFFLTGIRVLARKDSKMVYWKD 136

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           +   S+ + A   T  ++   +    ++  P ++E + E  +  +  R DA   D     
Sbjct: 137 IIDPSVKIGA---TMGSVHADYVEKQLRKKPFLYENLAEWLSDLKTGRIDAVMDDEMLCI 193

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            L        E  IL   +       A  Q D+E  ++V+W
Sbjct: 194 ELV---KNNPELKILEGYVRPDTYGLAFRQ-DSESDSLVNW 230


>gi|255066836|ref|ZP_05318691.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria sicca ATCC 29256]
 gi|255048911|gb|EET44375.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria sicca ATCC 29256]
          Length = 316

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--------------ASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                       S++  I  +G +  G       
Sbjct: 43  MLKKFVLGGMTALVLAACGGEGGSASSSAPAQSANASGSLIERINNKGTITVGTEGTYAP 102

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 103 FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 159

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +  K   I S+  + G    V+   +      +  KA
Sbjct: 160 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKG----VKTAQSLTSNYGEKAKA 214

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 215 AG--AELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 256


>gi|226194539|ref|ZP_03790137.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|225933624|gb|EEH29613.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 324

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 86  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  + ++   
Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 299


>gi|116511362|ref|YP_808578.1| amino acid ABC transporter periplasmic protein [Lactococcus lactis
           subsp. cremoris SK11]
 gi|116107016|gb|ABJ72156.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 273

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 81/271 (29%), Gaps = 26/271 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           K   + ++ L  +   +   N       +  +KK G LK  ++     F           
Sbjct: 6   KKMTLGLVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKNT 65

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DVD   A+   +      ++   ++      +L + + DI          RE    
Sbjct: 66  VVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK--S 120

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F  + Y      ++ K      SSV    G  +  Q G+  E  +   FK        
Sbjct: 121 VNFSDVYYTASNYLVVKKSDLGKYSSVDDFKGKKVAAQKGSIQEGIVTSQFK----GTTE 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAII 231
           I   ++ +     +  +      +     +    N        +     K       A+ 
Sbjct: 177 IALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVEVKTPKDSYGSAVALP 235

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           +G  E   +V+         EEL   Q N +
Sbjct: 236 KGSDELTKVVNSVIK-----EELKNGQINKD 261


>gi|261378818|ref|ZP_05983391.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria cinerea ATCC 14685]
 gi|269144797|gb|EEZ71215.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria cinerea ATCC 14685]
          Length = 274

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 66/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                     + S++  I  +G +  G       
Sbjct: 1   MLKKFILGGMTALVLAACGGEGGSASSSAPAQSAGESGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +  K   I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|148379979|ref|YP_001254520.1| amino acid ABC transporter substrate-binding protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153934075|ref|YP_001384278.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|153938267|ref|YP_001391342.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|148289463|emb|CAL83560.1| probable amino acid abc transporter,substrate-binding protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|152930119|gb|ABS35619.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152934163|gb|ABS39661.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           Langeland]
 gi|295319371|gb|ADF99748.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           230613]
          Length = 272

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S +  IK+ G L  G       +  
Sbjct: 1   MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +DI+    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  I Y   Q  ++  +      S+ +  G  I VQ GTT E    +  
Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           K            +V ++    +  + D    +     +       
Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217


>gi|260914458|ref|ZP_05920927.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260631559|gb|EEX49741.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 263

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 83/253 (32%), Gaps = 15/253 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 ++L   ++F  +   NA  +   ++    L  G       F    A+G   GFD
Sbjct: 7   KTKLTTALLAASLIFGVASQVNAGPISDRVESTKTLLVGTEGTYAPFTFHDASGKLTGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +     KIQ         +  L +K+ D+++  T      E      +  
Sbjct: 67  VEVIEEVAKRLG---LKIQLQETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYIYSE 121

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     +       +++   L G     Q+ T+    +A    A+      +  E +
Sbjct: 122 PYNYSNAVVVTRADDNSVATFEDLKGKKSG-QSLTSNYTKIAQKHGAN-----LVTVEGL 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     R  R D    D  A+              I  +   K P   A ++G+ E  +
Sbjct: 176 AQALELIRQKRADTTVNDKLAVLDYFQKMPNAG-LKIAAENKDKVPSGFAFLKGEEELVS 234

Query: 240 IVSWTHYAMVTAE 252
            V+    A + A+
Sbjct: 235 KVNQAL-AEIRAD 246


>gi|148379166|ref|YP_001253707.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|153933499|ref|YP_001383542.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|153937472|ref|YP_001387091.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A str. Hall]
 gi|148288650|emb|CAL82731.1| putative cystine ABC transporter,substrate-binding protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|152929543|gb|ABS35043.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152933386|gb|ABS38885.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A str. Hall]
          Length = 274

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 10/253 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59
           +K  F+S+  L++    + +  A    +IK+    +K G +     F  +   +   +GF
Sbjct: 6   FKKIFLSM-SLVVALGVALTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    +       P    +   +       L + +ID ++     T   +      F 
Sbjct: 65  EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177
               + G      K    I S+  L G S+  Q GT    ++ D+   +         + 
Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKSVATQVGTNYSQSIEDHNNKNKGEDIKTKQYN 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +       R DA   D  A       +    +    P    ++         + E 
Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239

Query: 238 YNIVSWTHYAMVT 250
              ++     M  
Sbjct: 240 IEKINKALDDMKN 252


>gi|221067529|ref|ZP_03543634.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|220712552|gb|EED67920.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
          Length = 300

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 9/230 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66
           +++    +   +   +++    IK+ G L+ G       F+ +   +G  +GFD+   + 
Sbjct: 36  ALVAQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  I  D +K Q+  + +  R   L + Q+D++      T  R     ++F    Y   
Sbjct: 96  ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAE--KISFAGPYYTSQ 153

Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            G ++      + S + L G  +  QAG+T    LA Y            F+  +E   A
Sbjct: 154 SGVLVKSNNKTLQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            R  R DAY  D + L    L+    +  +      ++ P    + +G  
Sbjct: 210 LRQGRVDAYVTDYTLLL-NALSLGTSNARLAGAPFGAQDPYGVGLPKGSD 258


>gi|295098053|emb|CBK87143.1| L-histidine-binding protein [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 260

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D    L   I    ++  Y+         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAKGELVGFDIDLANELCKRI---KAQCTYVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID++  +   T  R     +AF    Y      ++ K   I  ++  L G  + V  G
Sbjct: 84  KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKSSDIQPTLESLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  E I A   A R DA   D  A     L      +
Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      I    L        + + D E    ++   +A + A+         ++++K  
Sbjct: 200 YKFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYDKLAKKY 252

Query: 269 TNPDV 273
            + +V
Sbjct: 253 FDFNV 257


>gi|320177860|gb|EFW52846.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Shigella boydii ATCC 9905]
          Length = 287

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 75/214 (35%), Gaps = 12/214 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L    +T  V F   + +  + GFDVD   A++  +  D       P++      ALQ
Sbjct: 64  KKLVVETDTAFVPFEFKQGD-KYVGFDVDLWAAIAKELKLDYE---LKPMDFSGIIPALQ 119

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +K +D+       T  R+    + F    Y      ++      + SV  L G  + V++
Sbjct: 120 TKNVDLALAGITITDERKK--AIDFSDGYYKSDLLVMVKANNNDVKSVKDLDGKVVAVKS 177

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT +     DY KA+        F  ++        +R DA   D   +     T     
Sbjct: 178 GTGSV----DYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNG- 232

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +   + D +       A  +G  E  + V+    
Sbjct: 233 QFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALK 266


>gi|126459761|ref|YP_001056039.1| extracellular solute-binding protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126249482|gb|ABO08573.1| extracellular solute-binding protein, family 3 [Pyrobaculum
           calidifontis JCM 11548]
          Length = 270

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%)

Query: 5   FFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
             + ++   +  + +    A+       +  IKKRG L  G +     +  V   G   G
Sbjct: 13  LVIGVVLGALANWGAQQQQAAPPTCPTSVDAIKKRGKLILGTSADWPPYEYV-EGGQIVG 71

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+  + +++A+     +++   +       A++  ++D++  +   T  RE    + F
Sbjct: 72  IDVEIAKRIANALG---VQLEIRDIKFSGLIEAVKRGEVDLVLADMAITPEREA--QVLF 126

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 D    I      ++SV  L G +I VQ GT  E       K        + +++
Sbjct: 127 SIPYQVDSSVVITLGSGKVASVDDLRGKAIGVQIGTVQEDWA---VKTLGNSSKIVRYDK 183

Query: 179 -VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +  A +    DA         AL        +   +    S    A A+     + 
Sbjct: 184 VYPYMVEALKKGDLDAIVVGGVVGRALVAKFPELRQAFSVGVRYS----AAAMPLCAHDL 239

Query: 238 YNIVSWTHYAMVTAEELG 255
             +V    Y M+ + E+ 
Sbjct: 240 KLVVDKVIYDMLQSGEME 257


>gi|190894721|ref|YP_001985014.1| putative amino acid ABC transporter substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190700382|gb|ACE94464.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|327193170|gb|EGE60079.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CNPAF512]
          Length = 277

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 23/263 (8%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +      +   L I+     +T  ++L  +     LK   +      + +    +  G
Sbjct: 1   MNRLTKMTAAAASLAIVLAAVPATAGAVLDRVMAAKDLKVATDANWAPQSFMNDKNELDG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D  + +   +      ++++            + + D+   +   T  R       F
Sbjct: 61  FDIDVAKDIGRRLGVK---VEFVTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEI--FDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-------ADYFKAHNMKY 171
             + Y+       HK    + +S   G  +   A +T E          A    A   ++
Sbjct: 116 PAVYYYTPAAVAAHKDSKATKLSDFDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEF 175

Query: 172 HPIVFERVE---EIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
            P   +            R     R DA    +    ++            + D +   P
Sbjct: 176 KPKEVKSYANSTTAFDDLRLGDGTRLDAVVSSLP---SILEAVKAGYPIKQIGDPVFYEP 232

Query: 226 LAPAIIQGDTEWYNIVSWTHYAM 248
           LA AI  GD  + + ++     M
Sbjct: 233 LAVAIEHGDKSFNDKIAEAVKGM 255


>gi|157831886|pdb|1LST|A Chain A, Three-Dimensional Structures Of The Periplasmic Lysine-,
           Arginine-, Ornithine-Binding Protein With And Without A
           Ligand
          Length = 239

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +T    F+   A G++ GFD+D    +   +     K  ++  +      +L++
Sbjct: 5   TVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKA 61

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      I  K   I  ++  L G  + V  G
Sbjct: 62  KKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQG 119

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T E    D ++   +    + +   + I +   A R DA   D  A     L      E
Sbjct: 120 STQEAYANDNWRTKGVD--VVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKE 177

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +             + + DTE                EL       ++++K  
Sbjct: 178 YAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALT------ELRQDGT-YDKMAKKY 230

Query: 269 TNPDV 273
            + +V
Sbjct: 231 FDFNV 235


>gi|325134067|gb|EGC56722.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis M13399]
          Length = 274

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K   +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKIVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|254181368|ref|ZP_04887965.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1655]
 gi|254190768|ref|ZP_04897275.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|157938443|gb|EDO94113.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|184211906|gb|EDU08949.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1655]
          Length = 324

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 86  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +    ++   
Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 299


>gi|29829524|ref|NP_824158.1| arginine/ornithine binding protein [Streptomyces avermitilis
           MA-4680]
 gi|29606632|dbj|BAC70693.1| putative arginine/ornithine ABC transporter substrate-binding
           protein [Streptomyces avermitilis MA-4680]
          Length = 319

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 18/242 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             ++  G +K G +           +G   G D D   A+   +       ++       
Sbjct: 60  ESVRNAGVVKVGSDIAYAPVEFKDNSGKTVGIDPDLAEAMGKQLGVK---FEFQNGTFDT 116

Query: 88  RFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFDGQGFIMH--KKK 135
               L+SK+ DI       T  R+             G+ F    +  G        K +
Sbjct: 117 LITGLRSKRYDIAMSAMTDTKDRQEGVDSTTGKKVGEGVDFID-YFTAGVSIYTPKGKTQ 175

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDA 193
            I + S L G  + +Q GT +E       K            F+  ++     RA   DA
Sbjct: 176 NIKTWSDLCGKKLVLQRGTVSEDLAKSEAKKCPSGKTISIQAFDNDQQAQTRLRAGGADA 235

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            + D         T+    +  I+ + +  +P   A+ + +T+  + +     A++   E
Sbjct: 236 GSSDFPVAAYAVKTSGGGKDFQIVGEQVEAAPYGIAVAKSNTQLRDALQAALDAIIKNGE 295

Query: 254 LG 255
             
Sbjct: 296 YD 297


>gi|76808645|ref|YP_332660.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710b]
 gi|254259172|ref|ZP_04950226.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1710a]
 gi|76578098|gb|ABA47573.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 1710b]
 gi|254217861|gb|EET07245.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 1710a]
          Length = 324

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 86  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +    ++   
Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 299


>gi|300717678|ref|YP_003742481.1| lysine/arginine/ornithine ABC transporter, substrate-binding
           protein [Erwinia billingiae Eb661]
 gi|299063514|emb|CAX60634.1| lysine/arginine/ornithine ABC transporter, substrate-binding
           protein [Erwinia billingiae Eb661]
          Length = 260

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 72/221 (32%), Gaps = 13/221 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ G +     F    A G   GFD+D    +   +    +K  Y+  +      +L+
Sbjct: 26  KTLRIGTDPTYAPFESKNAQGQLVGFDIDLANEICKRM---ETKCTYVESDFDALIPSLK 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
           +K+ID +  +   T  R   + +AF    Y      I  K   I      L G +I +  
Sbjct: 83  AKKIDAIISSLSITEKR--QMEIAFSEKLYAANARLIAPKGSKIMPTLDSLKGKTIGLLQ 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT E    + ++   +   P  +   + +     A R DA   D  A     L      
Sbjct: 141 GTTQETYANENWRPKGITVTP--YANQDLVYQDLTAGRIDAAFQDEVAASEGFLKQPAGK 198

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
                   +    +        + + D +    +     +M
Sbjct: 199 GFAFAGPAVKDEKIFGVGTGMGMRKDDADLKAAIDKAFDSM 239


>gi|257414109|ref|ZP_04745253.2| bacterial extracellular solute-binding protein [Roseburia
           intestinalis L1-82]
 gi|257201196|gb|EEU99480.1| bacterial extracellular solute-binding protein [Roseburia
           intestinalis L1-82]
          Length = 271

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 10/235 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K +  +I    +    +           ++   L  G +     +  +  +G   G DV+
Sbjct: 6   KKYIAAIGICFMALGAACIMKKDPEEVGEELPELIIG-SDNYEPYNYLDDDGKPVGIDVE 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+   +   P    +  +   ++   L + ++D L  +       +      +    
Sbjct: 65  LAEAVCEQLGYTP---VFQYIVWDKKDEYLDNGKVDCLWGSFTMNGREDEYQ---WAGPY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-VFERVEE 181
            +  Q   +     I ++S L+G  + VQA T  E  L +       +   +     ++E
Sbjct: 119 LYSRQVIAVRTDSKIRNISDLAGKRVAVQATTKPEEVLLERSDPRVPEVDMVYSLSGMDE 178

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           I A+ R    DA TG  SAL   +   + P  + IL + +  S L  A      +
Sbjct: 179 IYASLRKGYVDAITGHESAL--ERFVGNAPDMYAILDESLYISELGVAFKNDTHQ 231


>gi|157144751|ref|YP_001452070.1| hypothetical protein CKO_00478 [Citrobacter koseri ATCC BAA-895]
 gi|157081956|gb|ABV11634.1| hypothetical protein CKO_00478 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KVRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKFYAADSRLVVAKDSDIQPTVESLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|255526251|ref|ZP_05393168.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296186245|ref|ZP_06854649.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
 gi|255510031|gb|EET86354.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296049046|gb|EFG88476.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
          Length = 266

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 90/253 (35%), Gaps = 14/253 (5%)

Query: 1   MYKDFFVSILC--LIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWK 57
           M K+    I    L I+ FT  S+  S       +   +K G++ G   +     +    
Sbjct: 1   MIKNVKTVIAAGLLSIMMFTGCSSTNSTQAQGSGQNKVIKIGMSGGYYPYTFKNKDNKID 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+VD    +       P    ++  +    F  L + ++D ++     T  R+      
Sbjct: 61  GFEVDVWNEIGKRTGYKPE---FVTASFSGLFGMLDAGKVDTIANEITITDKRK--DKYL 115

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     + G   ++ K    I+ +  L G  I V  G+  E  + D  K++      + +
Sbjct: 116 FTDAYVYSGAQIMVKKGNNSITKLDDLKGKKIGVSLGSNYEQIVKDNDKSN--SIKVVTY 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +    +       R DA   D  +  A+   N  P +     D+      A   ++ + E
Sbjct: 174 DNDGGMRQDVALGRIDAMMDDKVSALAVVQENKLPLQLAG-KDVQPLE-NAFPFVK-NDE 230

Query: 237 WYNIVSWTHYAMV 249
              IV   + A+V
Sbjct: 231 NKKIVEKVNKALV 243


>gi|257066001|ref|YP_003152257.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
 gi|256797881|gb|ACV28536.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
          Length = 490

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 13/228 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I   G +  G +     +   + + +  G D D  +A++  +     +++   ++   
Sbjct: 27  EKIVDDGVIDLGTSADFPPYEYYEGD-EIVGIDPDIVKAIAEELG---LEVKLHDMDFNN 82

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              ++QS ++D  +     T  R+    + F        Q  +  K   I  +  L G  
Sbjct: 83  IIASIQSGKVDGGAAGFTVTEERKK--SVNFTEPFAKTSQIIVKRKDSDIEEIEDLEGKK 140

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +  Q G+  +    D F   N       F +V +   + ++ + DA   D  +       
Sbjct: 141 LGTQLGSIGDTIAKDDFGEEN----VSSFNKVPDAILSLQSKKIDAVILDKQSAENFVNA 196

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           N    +  I+     +   A A+ + +      ++     +    E+ 
Sbjct: 197 NK---DLEIVDTPYLEEEYAIAVNKDNPVLLEKMNEAITKLKEEGEID 241


>gi|89902567|ref|YP_525038.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89347304|gb|ABD71507.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 255

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 78/243 (32%), Gaps = 18/243 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            V+   L+ L   S            +   L  G +     FA      +  G+DVD  +
Sbjct: 7   IVASAGLLTLALGSVQA---------QNKELVVGSSATYRPFAYENPAKEIVGYDVDIIK 57

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++        +I+ +       F AL +  +D++         R+      F    +  
Sbjct: 58  AVAQKAG---LQIKVVNTPWTGIFAALNNGDVDLVISGVTINDKRK--QSYDFTMPYFEA 112

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            Q   + K     S+  L+G  I V  G+T + T++  F   N       FE    + + 
Sbjct: 113 RQLIAVQKDSTAKSLKDLAGKKIGVVTGSTGDDTVSREFGKTNPD--IRRFESTPVVISE 170

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 DA  GD   +      + +            K      + QG+    + ++   
Sbjct: 171 LVNSGVDAAIGDNGVIAFRVQEHKQLKTVN--DPSFPKEYFGIVVKQGNKALLDKLNAGL 228

Query: 246 YAM 248
            A+
Sbjct: 229 SAI 231


>gi|291618032|ref|YP_003520774.1| ArgT [Pantoea ananatis LMG 20103]
 gi|291153062|gb|ADD77646.1| ArgT [Pantoea ananatis LMG 20103]
          Length = 265

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +F   A     I++   ++  ++     F      G   GFD+D   AL + +    +
Sbjct: 21  GCAFGAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCAQM---QA 70

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K  ++         AL++++ D +  +   T  R     + F    Y      I  K  G
Sbjct: 71  KCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTQPLYDTHAQLIARKGSG 128

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + +   L G ++ V+ GT  E      ++ H      + +    ++++   A R DA  
Sbjct: 129 LLPTPESLKGKTVGVEQGTVQERYARAKWQPHG--VTVVPYGDQAQVESDLVAGRLDAVF 186

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
            D +      L   +  +   L   I + P+     A  + +GD E    +     
Sbjct: 187 TDAAQAANGFLKQPQGKDF-ALAGPIVQDPIIGPGTAIGLRKGDAELKTALDTAFN 241


>gi|170758226|ref|YP_001787409.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169405215|gb|ACA53626.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 272

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S +  IK+ G L  G       +  
Sbjct: 1   MNKKILGKLGAIIISLTMIISLVACGKNTASNEGKSKVDKIKESGKLVVGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +DI+    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  I Y   Q  ++  +      S+ +  G  I VQ GTT E    +  
Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           K            +V ++    +  + D    +     +       
Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217


>gi|326565594|gb|EGE15757.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis 12P80B1]
 gi|326572014|gb|EGE22016.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis BC8]
          Length = 265

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M      +     +    + S  ++                 L     +    F+ +   
Sbjct: 1   MTTVLKFTTAAFCVSLLAACSNESTTNTKTTAAPNSSTSQKELIIATESSFKPFSYLDKQ 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF++D   AL   +  D    Q +  +      +L + + D +      T  R   
Sbjct: 61  GQLVGFEIDLANALCKQMQAD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    + +    I  K     +++ ++G ++  Q  T +   L  ++   N     
Sbjct: 116 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +++ +       A R +    D+        T       +    I     +  A+ + 
Sbjct: 171 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 230

Query: 234 DT 235
            +
Sbjct: 231 SS 232


>gi|117619357|ref|YP_855198.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117560764|gb|ABK37712.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 245

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 83/256 (32%), Gaps = 30/256 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  + +L  +  +              +K         F  +    +++GFD
Sbjct: 1   MKKSLLL-VAAMGLLSTSVLA------------KEIKFATEATYAPFEYLDDKNEFQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+         +  +          +L+ ++ D      D T  R     + F  
Sbjct: 48  IDLARAICEQA---KLECSFHNQAFDSLIPSLKFRRYDAAIAAMDVTPERAA--QVDFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y +   F+  K        +L   ++ VQ GT+ +  L D + +       + +   +
Sbjct: 103 IYYQNSAVFVTKKG-AFKGPEELVDKTVGVQNGTSHQSYLVDNWVSKG--LLTVPYASYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                    R D    D +        +    E+ ++   ++ +         A+ +G+ 
Sbjct: 160 SAFLDMMNGRTDGVFADTAVAADWLKQHK---EYAVIGTPVTDAKYFGTGFGIAVAKGNQ 216

Query: 236 EWYNIVSWTHYAMVTA 251
           E    ++    A + A
Sbjct: 217 ELLTQLNKGL-ADIKA 231


>gi|293397143|ref|ZP_06641417.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette
           transporter, binding protein [Serratia odorifera DSM
           4582]
 gi|291420614|gb|EFE93869.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette
           transporter, binding protein [Serratia odorifera DSM
           4582]
          Length = 260

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 86/249 (34%), Gaps = 21/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    +++    L         S L    + G L+ G+      F    A+G  +GFD+D
Sbjct: 2   KTTLKTLIAAGCLL-----AAGSTLAA--EHG-LRFGVEALYPPFESKSASGQLEGFDID 53

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+ +A      +  ++  +      ALQ+++ D+++   + T  R+    + F    
Sbjct: 54  LGNAVCAAA---KLQCSWVETSFDSLIPALQARKFDVINSAMNVTEQRK--QAIDFTKAI 108

Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y      I     G+  + + L+G  + V  G+  E     ++         + ++   +
Sbjct: 109 YQVPNRLIAKADSGLTPNATALAGKRVGVLQGSIQENYAKAHWAPQG--VEVVAYQDQNQ 166

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTE 236
           +     A R DA      A  +  L +        + D +         +A  + + + E
Sbjct: 167 VYLDLTAGRLDATLIMAPAGQSGFLAHPDGKGFAFVGDAVQDEKIFGSGIAFGLRKDERE 226

Query: 237 WYNIVSWTH 245
               +    
Sbjct: 227 LKQRLDAAI 235


>gi|257125598|ref|YP_003163712.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
 gi|257049537|gb|ACV38721.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
          Length = 246

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 85/257 (33%), Gaps = 28/257 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K FF+  L +  +       +            L+ G+N     F  +  NG   GFD
Sbjct: 1   MKKIFFILTLAMFGIISCGKKADNG-------EKKLRVGLNAVFAPFEYI-ENGQVTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    +   +      ++ +  +      AL++ +IDI+      T  R+    + F  
Sbjct: 53  VEMINEIGKNLGYK---VEIIDQSFDGLIPALKAGKIDIIVSGMSSTEERKK--SVDFTD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   + ++  K     + + LSG  I VQ GT  E+       A       +  E   
Sbjct: 108 DYFVSKETYLRKKGNNAVTPTTLSGKKIGVQLGTIQEMEARTIKGA-----TVVPNENTV 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +A + DA   + +   A +     P   +         P+  A+     +   +
Sbjct: 163 NTILDLKAGKIDAIILEKA--VATEYMKKNPEMEIFDEKPA---PIGMAMAVDKGKNPEL 217

Query: 241 VSWTHYAMVTAEELGIT 257
           +       + AE   + 
Sbjct: 218 IKQ-----INAELKKMR 229


>gi|124385036|ref|YP_001028962.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|217420154|ref|ZP_03451660.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 576]
 gi|237811359|ref|YP_002895810.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei MSHR346]
 gi|254298305|ref|ZP_04965757.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 406e]
 gi|124293056|gb|ABN02325.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|157808271|gb|EDO85441.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 406e]
 gi|217397458|gb|EEC37474.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 576]
 gi|237504242|gb|ACQ96560.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei MSHR346]
          Length = 324

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 86  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  + ++   
Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 299


>gi|172061357|ref|YP_001809009.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia ambifaria MC40-6]
 gi|171993874|gb|ACB64793.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MC40-6]
          Length = 258

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 77  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKHVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTVIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINKAL 233


>gi|110678538|ref|YP_681545.1| amino-acid ABC transporter, periplasmic binding protein
           [Roseobacter denitrificans OCh 114]
 gi|109454654|gb|ABG30859.1| amino-acid ABC transporter, periplasmic binding protein
           [Roseobacter denitrificans OCh 114]
          Length = 278

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 8/227 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LSSAIFDDPSKI 78
           +A  L  IK+ G L  G  T     + +  N + KG+    C A    +++ +     +I
Sbjct: 19  HAQTLERIKQNGQLVIGFRTDAAPLSYLGEN-EPKGYTPTVCYALASKIAAEVEVPDLEI 77

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +  + A++RF  + +  ID+L      TL R     + F    Y DG   ++ K     
Sbjct: 78  IFRSVTAEDRFEQVANGNIDLLCGAATITLER--RELVDFSVPIYVDGTVVVLKKGGP-D 134

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+  L+G  + V+A TTT   L +   A ++    ++F+      AA       AY  D 
Sbjct: 135 SLEGLAGMKVGVRAATTTLEALQNSLAAADIAAEVVIFDDHPTGMAALEQDEIAAYFADQ 194

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           S L  + + ++  +E  +   +++      A+ +GDTE+  +V    
Sbjct: 195 SILMNMVMQSEVANELKVFDQLLTVEKQGLAMARGDTEFRLVVDRGL 241


>gi|1065303|pdb|1LAF|E Chain E, Structural Bases For Multiple Ligand Specificity Of The
           Periplasmic Lysine-, Arginine-, Ornithine-Binding
           Protein
 gi|1065310|pdb|1LAG|E Chain E, Structural Bases For Multiple Ligand Specificity Of The
           Periplasmic Lysine-, Arginine-, Ornithine-Binding
           Protein
 gi|1065315|pdb|1LAH|E Chain E, Structural Bases For Multiple Ligand Specificity Of The
           Periplasmic Lysine-, Arginine-, Ornithine-Binding
           Protein
 gi|157835300|pdb|2LAO|A Chain A, Three-Dimensional Structures Of The Periplasmic Lysine-,
           Arginine-, Ornithine-Binding Protein With And Without A
           Ligand
          Length = 238

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +T    F+   A G++ GFD+D    +   +     K  ++  +      +L++
Sbjct: 5   TVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKA 61

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      I  K   I  ++  L G  + V  G
Sbjct: 62  KKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQG 119

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T E    D ++   +    + +   + I +   A R DA   D  A     L      E
Sbjct: 120 STQEAYANDNWRTKGVD--VVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKE 177

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +             + + DTE                EL       ++++K  
Sbjct: 178 YAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALT------ELRQDGT-YDKMAKKY 230

Query: 269 TNPDV 273
            + +V
Sbjct: 231 FDFNV 235


>gi|237808726|ref|YP_002893166.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
 gi|237500987|gb|ACQ93580.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
          Length = 259

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 10/239 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             A  L DI+++G LK  +      F  V A+    G+D+D    L+  +     K++ +
Sbjct: 21  AKADQLDDIQQKGVLKVAVPQDFPPFGSVGADMQPYGYDIDMAGYLAQKL---NVKLELV 77

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+ +  R   LQ+K++D++  +      RE    + F         G    +   + +  
Sbjct: 78  PVTSANRIPYLQTKKVDLVISSLGKNPEREKV--IDFSNAYAPFFLGVFGAESVALKTSD 135

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +L+  +I V  G   ++ L+    A         FE      +AY + + D        +
Sbjct: 136 ELADKTIGVTRGAVEDMELSKIAPA---STTVKRFEDNNTTLSAYLSGQIDLIATGNVVI 192

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
             +      P        ++  SP    I +G+T     V+    A  +   L    +N
Sbjct: 193 AEIASRM--PDRKPATKFMLKNSPCFIGIYKGETRLQQKVNELITAARSDGSLNKFSEN 249


>gi|254196399|ref|ZP_04902823.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei S13]
 gi|169653142|gb|EDS85835.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei S13]
          Length = 361

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 123 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 179

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 180 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 237

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 238 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 295

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  + ++   
Sbjct: 296 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 336


>gi|302558466|ref|ZP_07310808.1| arginine/ornithine binding protein [Streptomyces griseoflavus
           Tu4000]
 gi|302476084|gb|EFL39177.1| arginine/ornithine binding protein [Streptomyces griseoflavus
           Tu4000]
          Length = 320

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 78/244 (31%), Gaps = 20/244 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+ +G +K G +           +G   G D D   A+   +       ++       
Sbjct: 59  QSIRDKGVVKVGSDIAYAPVEFKDDSGKVVGIDPDLAAAMGKQLG---VTFEFENATFDT 115

Query: 88  RFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITYFDGQGFIMHK--KK 135
               L SK+ D+       T  R+  +          G+ F    +  G     +K   +
Sbjct: 116 LIGGLASKRYDMAMSAMTDTKDRQEGVDADTGKKVGAGVDFVD-YFTAGVSLYTNKGADQ 174

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK----AHNMKYHPIVFERVEEIDAAYRAHRC 191
           GI +   L G ++ VQ  T +     D  K    A         F+   E +   R+   
Sbjct: 175 GIKTWDDLCGKTMAVQRNTFSHDLAKDQAKKCTDAGEKTLKIEPFDTNPEAETRMRSKGA 234

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           D  + D          +       I+ D +   P   A+ + +TE  + +     A++ +
Sbjct: 235 DVVSADFPIAAYSVKNSGGGKYFQIVGDQVEAGPYGIAVAKDNTELRDALQAAVQAVIDS 294

Query: 252 EELG 255
            E  
Sbjct: 295 GEYQ 298


>gi|152971237|ref|YP_001336346.1| histidine ABC transporter periplasmic substrate-binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238895828|ref|YP_002920564.1| histidine transport system periplasmic binding component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|288934234|ref|YP_003438293.1| cationic amino acid ABC transporter periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|290508437|ref|ZP_06547808.1| histidine-binding periplasmic protein [Klebsiella sp. 1_1_55]
 gi|329997347|ref|ZP_08302730.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Klebsiella sp. MS 92-3]
 gi|150956086|gb|ABR78116.1| histidine transport protein (ABC superfamily, peri_bind)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238548146|dbj|BAH64497.1| histidine transport system periplasmic binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288888963|gb|ADC57281.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Klebsiella variicola At-22]
 gi|289777831|gb|EFD85828.1| histidine-binding periplasmic protein [Klebsiella sp. 1_1_55]
 gi|328539096|gb|EGF65132.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Klebsiella sp. MS 92-3]
          Length = 260

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 77/216 (35%), Gaps = 13/216 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   +   ++ L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVKKGSPVTPDLATLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           +      I    L        + + D E    ++  
Sbjct: 200 YQFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA 235


>gi|89895380|ref|YP_518867.1| hypothetical protein DSY2634 [Desulfitobacterium hafniense Y51]
 gi|89334828|dbj|BAE84423.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 281

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 89/254 (35%), Gaps = 20/254 (7%)

Query: 1   MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K++           SIL          +  +    D      L  G+      F    
Sbjct: 1   MKKNYLLLLTAALLISSILLGCSKSQAPANQPSQAGNDAAAAQELIVGMELAYPPFEMTD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G   G  VDF + L +A+      ++   +       ALQ+K+ID++  +   T  R+
Sbjct: 61  EKGSPTGVSVDFAKDLGAALG---RPVKIENMAFSGLIPALQTKKIDMVISSMTITDERK 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169
            ++   F           ++++K  +  V  L   G  + V+ GTT  +       A+  
Sbjct: 118 KTVA--FSDPYAKAWLALLINEKSSVKEVKDLNAPGRKVAVKNGTTGHIYAQ----ANLP 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           +   +VFE+           + DA+  D  ++Y     N++ +   + P          A
Sbjct: 172 QAEIMVFEKESACILEVGQGKADAFIYDTLSIYRAWKQNEKTTRANLNPFQDKVEEWGVA 231

Query: 230 IIQGDTEWYNIVSW 243
           + Q D E    V+ 
Sbjct: 232 LRQDDKELTAKVNQ 245


>gi|315637960|ref|ZP_07893146.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter upsaliensis JV21]
 gi|315481995|gb|EFU72613.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter upsaliensis JV21]
          Length = 252

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 15/237 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  ++  + LF  + S  ++   D      L+ G       F     +    G D
Sbjct: 1   MRK-IFAFLVAFLSLFVAACSDTSTTNNDSNASLSLRVGTAPNYKPFDYK-EDAKLTGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++     +  ++ ++ ++      AL++ +ID+++     T   +    + F  
Sbjct: 59  IDLVNEIAKR---EGIELTWVEMSFDGLIPALKTGKIDMIASAMSATE--DRRKSVDFSD 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y     +I  K    ++S   L G  I VQ GT     L +              E +
Sbjct: 114 VYYTTKNLYIKKKDNETLNSKEDLEGKIIGVQLGT-----LQEPAAKAIKDTKVQSNESL 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             +    +  + DA   D           +         +       + A  +   +
Sbjct: 169 SVVIMELKEGKIDAVVADKDVSTGYL--KENADLIGFFEEEDGSEGFSFAFDKDKQK 223


>gi|149181760|ref|ZP_01860251.1| amino acid ABC transporter substrate-binding protein [Bacillus sp.
           SG-1]
 gi|148850501|gb|EDL64660.1| amino acid ABC transporter substrate-binding protein [Bacillus sp.
           SG-1]
          Length = 266

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 24/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K F  + L L  +  +          S + S L  +   G      +     F+    
Sbjct: 1   MKKLFSFAALSLSAVLISGCGTSETGSGSASDSGLDLV-DEGKFTYAASGEFKPFSVTSG 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   GFD++   A++  +  DP + ++           +Q+ + D    +   T  R  
Sbjct: 60  DGTMTGFDIEVAEAVAKELGLDPEQKKFK---FAGIVEGVQAGRFDAAVASHTITDERAE 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              + F    Y+ G    +     + ++  L G  I V  G+T   T ++      +  +
Sbjct: 117 --KVDFSTPYYYSGPQIFVRPDSDVETLEDLEGMEIAVSKGSTYADTASE------VTEN 168

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              ++       A    + DA   D                 +   +++ +S  A A+ Q
Sbjct: 169 IKTYDSDVVALEALSKGKHDAVITDFVTGKEAI----GAGLEIDTRELLGRSEQAIAVAQ 224

Query: 233 GDTEWYNIVSWTH 245
            + E    ++   
Sbjct: 225 DNDELLEAINEAL 237


>gi|322369617|ref|ZP_08044181.1| ABC-type transport system periplasmic substrate-binding protein
           (probable substrate glutamine) [Haladaptatus
           paucihalophilus DX253]
 gi|320550787|gb|EFW92437.1| ABC-type transport system periplasmic substrate-binding protein
           (probable substrate glutamine) [Haladaptatus
           paucihalophilus DX253]
          Length = 273

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 69/233 (29%), Gaps = 24/233 (10%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G +  G +     F    A+G  +GFD     A+     D     ++          +
Sbjct: 33  DTGKILIGSDIPYKPFEYRTADGSLEGFDPGIAEAIFKGQLDRE--YEFKKAGFDTIIDS 90

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++K   ++      T  R     + F    +   Q   + K  GI  +  L G ++ VQ
Sbjct: 91  LKNKNFRLIMSAMTITDKRAE--KVDFSDPYFTAYQTVAIRKGGGIEKLDDLKGKTVAVQ 148

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN--- 208
            GTT E       +          ++++     A R  +  A   D +            
Sbjct: 149 KGTTGESAAEKVKEDFGGSLTIHSYDQIAGAFNALRNQQAVAVINDNTVNAEFVNKMDGV 208

Query: 209 -------------DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                            +++ L    +      A  + D +    V+    A+
Sbjct: 209 VFLEGEGEAAKQGKNAPDYLTL----TIEEYGIAFRKDDDDLRKQVNEAIKAI 257


>gi|317047452|ref|YP_004115100.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316949069|gb|ADU68544.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 273

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 15/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K    ++   ++L  ++++  A +   IK++G L   I             +    G 
Sbjct: 1   MKKLLLSAVSAALLLQSSAWADIA-VPASIKEKG-LTVAIMPNYPPMDFKDPASNQLTGV 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D   A+   +      I +  +  ++   A+ +K++D++      T  R+    + F 
Sbjct: 59  DYDLGMAIGQKLGVK---INWQEIAFEQMVNAVVTKRVDMVMSGMTDTKERQKV--VNFI 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174
                  Q + +  +  I+S   L G  +     TT    +A++ K H           +
Sbjct: 114 DYFKTGPQFYTLSARSDINSAMDLCGKRVGTSRRTTFPQEIANWSKEHCESAGKPAIVVV 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   +     R  R DA     S      +  ++ +    L    S      AI +  
Sbjct: 174 GAEGTADARTQLRQRRLDAAVQG-SETLPYIMDLEKGT-FKPLDKAFSFQYTGMAIGKDA 231

Query: 235 TEWYNIVSWTHYAMVT 250
           ++    V     AM+ 
Sbjct: 232 SDLTTAVQGALDAMIA 247


>gi|134281021|ref|ZP_01767730.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 305]
 gi|134247327|gb|EBA47412.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 305]
          Length = 324

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 86  KEWKTVRIGVDASYPPFESTAPSGEVVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  SV  L G  + 
Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258

Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245
                        K P       A  + + D +    ++   
Sbjct: 259 HGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 299


>gi|82544791|ref|YP_408738.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           boydii Sb227]
 gi|81246202|gb|ABB66910.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           boydii Sb227]
          Length = 260

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYALFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + + D
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|260881751|ref|ZP_05405151.2| glutamine ABC transporter, glutamine-binding protein [Mitsuokella
           multacida DSM 20544]
 gi|260848319|gb|EEX68326.1| glutamine ABC transporter, glutamine-binding protein [Mitsuokella
           multacida DSM 20544]
          Length = 283

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 93/309 (30%), Gaps = 67/309 (21%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAI 71
                     + S     KK   L+ G++     F         ++GFDVD  RA+ +  
Sbjct: 35  TAALTAGCGQSDSAEQSGKK--VLRVGMDASYPPFGSQNQETKDYEGFDVDIIRAIGAEE 92

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             D   ++    +      ALQ+K+ID+   +   T   +    + F    Y  G G ++
Sbjct: 93  GFD---VEISNRSFDGLIPALQAKEIDVAINDITITD--DRKQSVDFSKPYYIAGLGVVV 147

Query: 132 HK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                 I +   L G ++ V  G+T E        A+       VF  + E     +   
Sbjct: 148 RSDNDTIHTAEDLQGKTLGVSIGSTGEEAARKIPGAN-----VRVFNAINEAFLEVQNGG 202

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            DA   DI                      ++K  L  A+++G+TE    +         
Sbjct: 203 VDAVVNDIPTNEYYVSHAGN-KNVRTAEVALTKEDLGIAVLKGNTELLTKIDD------- 254

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
                                                  GL K      I+  G + E++
Sbjct: 255 ---------------------------------------GLAK------IKANGKFSEIY 269

Query: 311 DRNLGNQSE 319
           ++  G Q  
Sbjct: 270 EKWFGKQPP 278


>gi|13472037|ref|NP_103604.1| binding protein component of amino acid ABC transporter
           [Mesorhizobium loti MAFF303099]
 gi|14022782|dbj|BAB49390.1| probable binding protein component of amino acid ABC transporter
           [Mesorhizobium loti MAFF303099]
          Length = 262

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 11/223 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +I KRG L+  + T    F+ V ANG+  G  V+    ++  +      + +   + 
Sbjct: 24  TLDEITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEMGVKIKFLDF---DW 80

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-- 143
                AL S + D+L  +   TL R   + +AF     + G            +      
Sbjct: 81  DGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYMYTGSTVFTKADSKFKTTEDCKA 138

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  I V  G T E      F   ++K           +  A    + D    D+SA+  
Sbjct: 139 KGTKIAVLLGATGEKEAKTAFPDADIKS---YKGGGPLLLDAVNNGQADCGVNDVSAVKG 195

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                   S   I+PD++SK PLA A    + +    ++    
Sbjct: 196 QSTAYPAGS-FTIMPDLLSKEPLAFATRYDEPDLLVWMNLFLN 237


>gi|107023341|ref|YP_621668.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           cenocepacia AU 1054]
 gi|116690424|ref|YP_836047.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia HI2424]
 gi|170733744|ref|YP_001765691.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia cenocepacia MC0-3]
 gi|105893530|gb|ABF76695.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116648513|gb|ABK09154.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169816986|gb|ACA91569.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia cenocepacia MC0-3]
          Length = 260

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 77  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        + ++  +++ A     R DA   D        L   
Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTIVPYQNQDQVYADLGTGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINQAL 233


>gi|326624179|gb|EGE30524.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 251

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 93/267 (34%), Gaps = 25/267 (9%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +++   + + + + L        ++ G +T    F+   A G++ GFD+D    +   + 
Sbjct: 1   MLIGLGATAASYAALPQ-----TVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRM- 54

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K  ++  +      +L++K+ID +  +   T  R     +AF    Y      I  
Sbjct: 55  --QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAA 110

Query: 133 KKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K   I  ++  L G  + V  G+T E    D ++   +    + +   + I +   A R 
Sbjct: 111 KGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQDLIYSDLTAGRL 168

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
           DA   D  A     L      E+      +             + + DTE          
Sbjct: 169 DAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALI 228

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDV 273
                 EL       ++++K   + +V
Sbjct: 229 ------ELRQDGT-YDKMAKKYFDFNV 248


>gi|296332722|ref|ZP_06875182.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305673067|ref|YP_003864739.1| cystine ABC transporter substrate-binding lipoprotein [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|296150002|gb|EFG90891.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305411311|gb|ADM36430.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 268

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      + + I    +              +  +   IKK+G L  G       F  
Sbjct: 1   MKKALLALFMVVSIAVLAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              +     G+DV+    ++  +     K+ +        F  L SK+ D+++     T 
Sbjct: 61  HDKDTDKLTGYDVEVITEVAKRLG---LKVDFNETQWDSMFAGLNSKRFDVIANQVGKT- 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +      F           +  K    I S + + G +   Q+ T+    LA    A 
Sbjct: 117 --DREDQYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATDAGAK 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    E + +     +  R D    D  A+     T+   +  +       +S   
Sbjct: 174 -----VEGVEGLAQSLQLIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGDPQSTY- 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               +G  E  + V+     M  
Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250


>gi|153834304|ref|ZP_01986971.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01]
 gi|156972752|ref|YP_001443659.1| prephrenate dehydratase [Vibrio harveyi ATCC BAA-1116]
 gi|148869312|gb|EDL68326.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01]
 gi|156524346|gb|ABU69432.1| hypothetical protein VIBHAR_00417 [Vibrio harveyi ATCC BAA-1116]
          Length = 258

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L + +L  T  +   S L ++  +G L+ G                 ++GF
Sbjct: 1   MKKTLL--ALGMCLLAMTQVAHANSRLQEVLDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  +        +    GT  E  + D+F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFDKPDVKVAATLGTVQEKMVKDFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|221200606|ref|ZP_03573647.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
 gi|221208433|ref|ZP_03581435.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221171621|gb|EEE04066.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221179178|gb|EEE11584.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
          Length = 261

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 90/254 (35%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +    L      SF+ + S          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRIAKLLTTALACAPLVSFAQDTST---------IRWGIDPTYPPFEAKQPDGSLSGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +    +K  ++  N      AL++++ D++      T  R     + F  
Sbjct: 52  IDLRDAICAQL---HAKCVWVEQNFDGMIPALRARKFDVIMSAMTATEER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +      + S +  L+G  + +  GTT ++     +         + ++  
Sbjct: 107 KLYASPAALVAPAGSKLQSTAASLAGKRVGIIQGTTQDMYAKAEWAPKG--VTIVTYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L  +R        D I+ S +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTERGKHFAFAGDDITDSRITGFGVAMGLRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
               + ++    A+
Sbjct: 225 AALKSRLNDAIAAI 238


>gi|330969354|gb|EGH69420.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 273

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++     + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGESLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|296113903|ref|YP_003627841.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis RH4]
 gi|295921597|gb|ADG61948.1| extracellular solute-binding protein family 3 [Moraxella
           catarrhalis RH4]
          Length = 267

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M      +     +    + S  ++                 L     +    F+ +   
Sbjct: 3   MTTVLKFTTAAFCVSLLAACSNESTTNTKTTAAPNSSTSQKELIIATESSFKPFSYLDKQ 62

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF++D   AL   +  D    Q +  +      +L + + D +      T  R   
Sbjct: 63  GQLVGFEIDLANALCKQMQAD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    + +    I  K     +++ ++G ++  Q  T +   L  ++   N     
Sbjct: 118 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +++ +       A R +    D+        T       +    I     +  A+ + 
Sbjct: 173 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 232

Query: 234 DT 235
            +
Sbjct: 233 SS 234


>gi|270720223|ref|ZP_06223378.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Haemophilus influenzae HK1212]
 gi|270315326|gb|EFA27627.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Haemophilus influenzae HK1212]
          Length = 253

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 78/255 (30%), Gaps = 19/255 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F + L    + F++FS    I   ++K   L  G       F     +G   GFDV+  
Sbjct: 1   LFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHSKDGKLTGFDVEII 60

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++  +     K+++        +  L +K+ D+++  T      E      +     +
Sbjct: 61  EKVAEKLG---LKVEFKETAWDGMYAGLNAKRFDVIANQT--NPSPERLKKYDYSAPYNY 115

Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                +       I + S L G      A +       D           +  + + +  
Sbjct: 116 SAGVIVTKENNDSIKTFSDLKGKKSAQSATSNWSKDARD------NGAIIVTMDSLAQNL 169

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A +  R D+   D  A+             + + +   K P     ++G+      V+ 
Sbjct: 170 EAVKQERVDSTVNDKLAVLDYFKKQPNAGLKIAV-ESDKKIPTGFVFLKGEEALIAKVNK 228

Query: 244 THYAMVTAEELGITQ 258
                   EEL    
Sbjct: 229 AL------EELRQDG 237


>gi|218885963|ref|YP_002435284.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218756917|gb|ACL07816.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 246

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 86/251 (34%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++  L++    +F+              +    +        V AN +  GF 
Sbjct: 1   MLKKIVLTLAALLVTANVAFA-----------EKTIVVAQDATWPPMEFVDANKNLVGFS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+  A++        KI +  +     F  L+S   D +  +   T  R+    + F  
Sbjct: 50  VDYTDAMAKEAG---FKIVHKNVAWDGIFAGLESGSYDAIVSSVSITDERK--NAMDFTA 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  ++ K   ++ + ++ G ++  Q  TT   T+               ++ + 
Sbjct: 105 PYYEVRQALVVPKTTNVTKLDEMKGKTLGGQISTTGYFTIKKTA-----GVTAKSYDEIG 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEW 237
                    R D    D     +  L  ++ +  + +    +   K     A+ +G+ E 
Sbjct: 160 LAMEDLFNGRIDGVVCDDPVAASYALQQEQYAAKMKIAFVIETQEKEFYGIAVKKGNKEV 219

Query: 238 YNIVSWTHYAM 248
            ++++    A+
Sbjct: 220 LDLLNKGIAAV 230


>gi|167841591|ref|ZP_02468275.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia thailandensis MSMB43]
          Length = 258

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I    +K  + P +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCVWTPQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I      +  ++  L G  + 
Sbjct: 77  ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPTIESLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     +++        + ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + D +  + ++   
Sbjct: 193 RGKGFAWAG-PAVKDPKTLGDGTAMGLRKDDADLKDAINRAL 233


>gi|148975202|ref|ZP_01812126.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrionales bacterium SWAT-3]
 gi|145965126|gb|EDK30376.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrionales bacterium SWAT-3]
          Length = 258

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L + +L FT  +   S L +I   G L+ G                 ++GF
Sbjct: 1   MKKSLI--ALGMCLLVFTQIAHAQSRLQEILDAGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-VTGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
                          +  S  S    A I V A   T  E  + D+F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDIEKFSDWSDFDKAEIKVAATLGTVQEKMVKDFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|282917128|ref|ZP_06324886.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus D139]
 gi|282319615|gb|EFB49967.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus D139]
          Length = 485

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 3   KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
           K     IL L +L          T+ +        IK+RG L+ G++           V 
Sbjct: 2   KCLIRFILVLGLLISSAMVYINPTAHAEQDQAWEKIKERGELRVGLSADYAPMEFEHTVN 61

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              ++ G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+
Sbjct: 62  GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F           ++ K        +   +   +  Q GT  E       +    
Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228
                   R+ ++  A ++ + +    +     A    N +    +V   +    + +A 
Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            + +   +  + ++ T   +     +     N      D +  
Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|298695127|gb|ADI98349.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 485

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 93/278 (33%), Gaps = 23/278 (8%)

Query: 6   FVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           F+ IL L+I         T+ +        IK+RG L+ G++           V    ++
Sbjct: 7   FILILGLLISSAMVYINPTAHAEQDQAWEKIKERGELRVGLSADYAPMEFEHTVNGKTEY 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  + ++     +  K++ + ++      AL++ +IDI+      T  R+    +
Sbjct: 67  AGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QV 121

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F           ++ K        +   +   +  Q GT  E       +         
Sbjct: 122 DFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASIT 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQG 233
              R+ ++  A ++ + +    +     A    N +    +V   +    + +A  + + 
Sbjct: 178 SLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKD 235

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
             +  + ++ T   +     +     N      D +  
Sbjct: 236 SPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273


>gi|254247531|ref|ZP_04940852.1| hypothetical protein BCPG_02331 [Burkholderia cenocepacia PC184]
 gi|124872307|gb|EAY64023.1| hypothetical protein BCPG_02331 [Burkholderia cenocepacia PC184]
          Length = 262

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 22  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 79  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 136

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        + ++  +++ A     R DA   D        L   
Sbjct: 137 VEQGSTQETYAKAYWEPQG--VTIVPYQNQDQVYADLGTGRLDATLQDELQADYGFLRTP 194

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINQAL 235


>gi|302868838|ref|YP_003837475.1| family 3 extracellular solute-binding protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302571697|gb|ADL47899.1| extracellular solute-binding protein family 3 [Micromonospora
           aurantiaca ATCC 27029]
          Length = 301

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 14/229 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             IK  G +  G ++       +  +G    GFDV+   A+++ +        ++     
Sbjct: 56  DAIKSDGKIVVGTDSTYAPAEFLDTDGKTVVGFDVELFTAVAAKLGLKAE---FVSAPFG 112

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SG 145
           +    + S + +    +      R+    +      +  G  ++  K            G
Sbjct: 113 DIINGVNSGKYEAGVSSFTINDERKGQANM---VSYFQVGTQWVTKKGNPAGVTLDNACG 169

Query: 146 ASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
             I VQ  T     +         A         F   +   AA  + + DA   D    
Sbjct: 170 KKIAVQKDTVQVEDIQKRSKACTDAGKPAITIDQFPGQDAATAAVVSGKDDAMLADYPVG 229

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 ++      +L      +P    + +  T+    V     A++ 
Sbjct: 230 VYAVTQSND--ALELLDKQYEAAPYGYVLAKEQTQLAEAVRDATKAVIA 276


>gi|227818838|ref|YP_002822809.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium
           fredii NGR234]
 gi|36959096|gb|AAQ87521.1| Amino-acid binding protein [Sinorhizobium fredii NGR234]
 gi|227337837|gb|ACP22056.1| probable amino acid ABC transporter, substrate-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 274

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 87/255 (34%), Gaps = 12/255 (4%)

Query: 2   YKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  +++  +      + + +A+ + +IK +G L  GI      +  V  +G   GFD
Sbjct: 5   RRSFLGLALATVAFATVGAAAASAASVEEIKAKGTLVVGIQGDNAPWGFVNTSGVQDGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D     +  +      +Q+ PL    R  AL + ++DIL      T  R     + +  
Sbjct: 65  ADVANLFAKELGVK---VQFQPLAVANRIPALTTGKVDILFATMAMTEERAK--SIQYSK 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +       K   ++    ++G  I V   ++ +  + D   A         F+   
Sbjct: 120 PYAANTISLYAAKSDTVTKPEDVAGWEIGVPKSSSQDKAVTD---AVGSTATVRRFDDDA 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  + +  A  G+    Y  +L       +    D ++          G+ +W   
Sbjct: 177 ATIQALISGQVKAVGGN--QFYGQRLDAASAGTYERKIDFLTT-YNGVGTRLGEKDWNEA 233

Query: 241 VSWTHYAMVTAEELG 255
           V+     +    EL 
Sbjct: 234 VNVFIDKIKANGELA 248


>gi|172056976|ref|YP_001813436.1| extracellular solute-binding protein [Exiguobacterium sibiricum
           255-15]
 gi|171989497|gb|ACB60419.1| extracellular solute-binding protein family 3 [Exiguobacterium
           sibiricum 255-15]
          Length = 258

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 78/223 (34%), Gaps = 14/223 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKR-GFLKCGINTGLVGFAEVK-ANG-DW 56
           M K    ++  ++ +   +   +  S     KK    L  G +     F  +  A G D 
Sbjct: 1   MKKLAATAMAGILAVTMAACGASEESTGDTTKKNDKVLTMGTSADYFPFEYIDTAKGDDI 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDV   + ++  +  D   ++   +       AL + ++D +      T  R+     
Sbjct: 61  VGFDVAIAKEVTKNLGYD---LKIEDMEFGSLLGALSAGRVDFVMAGMTPTDERKK--NA 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  I +      +M K K I+S  +L G  + VQ G+  E    D +K        +  
Sbjct: 116 DFTDIYFQSKN-LVMTKDKAIASDDELKGKKLGVQLGSIQEALAKDRYK----DSEAVSL 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
            ++ EI       R DA   + +        +     + I  D
Sbjct: 171 NKIPEIIQELNTGRIDALIIEDAVAVKYMDQDKALKTYEIKED 213


>gi|295697438|ref|YP_003590676.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
 gi|295413040|gb|ADG07532.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
          Length = 279

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 98/260 (37%), Gaps = 21/260 (8%)

Query: 1   MYKDF----FVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGF 47
           M K F    FV++   I+    S +T          AS L  IK+RG L  G +   V F
Sbjct: 1   MKKFFKTALFVALAAAILAGCGSGATTTGSQAEGNKASTLEAIKQRGTLIVGSSND-VPF 59

Query: 48  AEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           A +  +    KG D +  + ++  +     K++   +  +   + L +K ID+++     
Sbjct: 60  AYIDKDTKQLKGIDAEIIQEIAKRLG--IPKVEMKEIKFENLLVELNNKNIDMVTDGMYI 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              RE      F    Y +G+G ++ K   IS +  L    +  Q GT     +    + 
Sbjct: 118 KPEREKIAQ--FTHPWYKEGEGLVVRKDSTISGLEDLKDKVVGGQKGTAFLEYIQKM-QQ 174

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP 225
                   VF    E+  A    + DA   D +        +   +  ++ P   + +  
Sbjct: 175 QGKVKEVKVFGSQAELLLAINTDKIDAGITDSATAAYTIQHDPTLNVKLVSPYTPVFQGT 234

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           +A A+ + DT+    V+   
Sbjct: 235 VAAAVRKEDTDLLEAVNKEL 254


>gi|293397047|ref|ZP_06641321.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
 gi|291420518|gb|EFE93773.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
          Length = 258

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 22/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   L  + L F   S  A           L    +T  V F   + N  + GFD+D
Sbjct: 14  KSIFNVSLAALSLAFAVSSHAAD---------KLVVATDTAFVPFEFKQGN-QYVGFDID 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 64  LWAAIAKELKLDY---TLKPMDFGGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 118

Query: 123 YFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G    +      + SV  L G  + V++GT +   +    K          F  ++ 
Sbjct: 119 YKSGLLVMVNANNNDVKSVKDLDGKVVAVKSGTGSVDYVKQNVKTK----DLRQFPNIDN 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R DA   D   +    +      +   + D +       A  +G ++    V
Sbjct: 175 AYMELGTQRADAVVHDTPNIL-YFIKTAGAGKFKTVGDSLEAQQYGIAFPKG-SDLREKV 232

Query: 242 SWTHY 246
           +    
Sbjct: 233 NGALK 237


>gi|260776933|ref|ZP_05885827.1| polar amino acid uptake family ABC transporter substrate-binding
           protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606599|gb|EEX32873.1| polar amino acid uptake family ABC transporter substrate-binding
           protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 518

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 89/234 (38%), Gaps = 13/234 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + FF  ++   +L  +  +    +L  IK+ G +  G+      +  + +N    GF+
Sbjct: 1   MIR-FFTLLISCCLLLPSVQAQ--DLLSKIKQSGRIVIGVKADYPPWGMLDSNNQPAGFE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  + +  A+    +++++  + +  RF  L   Q+D+L      ++ R         P
Sbjct: 58  PDLAQMIGHAL---NAEVEFKTVTSANRFQKLNEGQVDMLIATVGDSMQR-RQRVRMITP 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   + HK   +   + L G  +C+ AG     +L   ++       PI+     
Sbjct: 114 HYFRSGVTALTHKSNSVEKWTDLIGKPVCLTAGAYFNKSLVQNYR-----IKPIILMSNR 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +   A   ++C A+  D S +          S++ +  + I     +    +  
Sbjct: 169 DSKLALLTNKCQAWAYD-SGILFHLSNQKEWSDYSVDVETIMPIHWSMVTRKDT 221


>gi|258425044|ref|ZP_05687915.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           A9635]
 gi|257844878|gb|EEV68921.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           A9635]
 gi|283471634|emb|CAQ50845.1| L-cystine-binding protein TcyA [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 259

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 13/213 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVVIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKA---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +      + R D    D  +    K       
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201


>gi|238026663|ref|YP_002910894.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia glumae BGR1]
 gi|237875857|gb|ACR28190.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia glumae BGR1]
          Length = 265

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 78/255 (30%), Gaps = 22/255 (8%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    +      +            +A+ L  I      + G+      F     +G   
Sbjct: 1   MKLNWRKMAACAVATAAAVSFLSGAHAAELKQI------RFGVEASYAPFEYKTPDGKLA 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   A+ + +        ++  +      ALQ+++ D ++ +   T  R     +A
Sbjct: 55  GFDVDVGNAVCAKL---KVPCVWVENDFDGLIPALQARKFDAINSDMTITPQR--LHAIA 109

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y      I  K  G + + + L G  + V  GT  E      +         + +
Sbjct: 110 FTDPIYSIPNQLIAKKGSGLLPTPASLKGKRVGVLQGTIQEAYAKARWAPAG--VEVVPY 167

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALY-ALKLTNDRPSEHVILPDIISKSPL----APAII 231
           +  +   A  ++ R DA   D  A                  P ++    L       + 
Sbjct: 168 QTQDLAYADLQSGRLDATFQDSEAAAKGFLSKPQAAGFAFAGPQVVDAEILGSGVGYGLR 227

Query: 232 QGDTEWYNIVSWTHY 246
           + DT     ++    
Sbjct: 228 KNDTALRAALNQALK 242


>gi|145298731|ref|YP_001141572.1| ABC-type amino acid transporter, periplasmic amino acid-binding
           protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851503|gb|ABO89824.1| ABC-type amino acid transporter, periplasmic amino acid-binding
           protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 259

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 81/253 (32%), Gaps = 18/253 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +K        L    FT        ++ L  I++ G L+ G++T    +A     G   G
Sbjct: 5   FKTALSGAALLFTALFTPAQAEGEASATLAQIEQSGTLRVGMST-FAPWAMRDKQGALIG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  R L++    +  +++++P        +L +K+ D++      T  RE    + F
Sbjct: 64  FEIDVARRLATD---NGWQVEFVPTAWDGIIPSLLAKKYDVIIGGLTITPEREK--SVRF 118

Query: 119 RPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                  G      K +       S     G  + V+ G +      + F          
Sbjct: 119 TQAYSHSGIQLAASKAQAQDKKTLSDFNQRGVILAVRRGASPVQVAKENFPKA----TLR 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+   ++       R               L +      +   + +S+     A+ +GD
Sbjct: 175 QFDDESQVFQEVLNGRAHGALSSSPKPEQETLRHPEAL-FMPFAEPLSQGSEGFALRKGD 233

Query: 235 TEWYNIVSWTHYA 247
                  +    A
Sbjct: 234 DALAEQFNEWIAA 246


>gi|49484630|ref|YP_041854.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257423897|ref|ZP_05600326.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257426580|ref|ZP_05602982.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257429216|ref|ZP_05605603.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257431862|ref|ZP_05608225.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257434822|ref|ZP_05610873.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus M876]
 gi|282902329|ref|ZP_06310222.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906757|ref|ZP_06314605.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282909733|ref|ZP_06317542.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282911979|ref|ZP_06319775.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282915274|ref|ZP_06323051.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282920998|ref|ZP_06328716.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus C427]
 gi|282925904|ref|ZP_06333552.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus C101]
 gi|283959197|ref|ZP_06376638.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293497670|ref|ZP_06665524.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293511250|ref|ZP_06669946.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus M809]
 gi|293549858|ref|ZP_06672530.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|295429001|ref|ZP_06821623.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297589504|ref|ZP_06948145.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49242759|emb|CAG41484.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257272915|gb|EEV05017.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257276211|gb|EEV07662.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257279697|gb|EEV10284.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257282741|gb|EEV12873.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257285418|gb|EEV15534.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus M876]
 gi|282312733|gb|EFB43137.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus C101]
 gi|282315413|gb|EFB45797.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus C427]
 gi|282320995|gb|EFB51329.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282323675|gb|EFB53991.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282326307|gb|EFB56611.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282329656|gb|EFB59177.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282596788|gb|EFC01747.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|283788789|gb|EFC27616.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290918905|gb|EFD95981.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291096601|gb|EFE26859.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291465876|gb|EFF08406.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus M809]
 gi|295126760|gb|EFG56404.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297578015|gb|EFH96728.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312437164|gb|ADQ76235.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315194907|gb|EFU25295.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 259

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 13/213 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVVIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKA---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I   + + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFNDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +      + R D    D  +    K       
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201


>gi|271500846|ref|YP_003333871.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Dickeya dadantii Ech586]
 gi|270344401|gb|ACZ77166.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech586]
          Length = 243

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 74/216 (34%), Gaps = 16/216 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  V A+    GFD+D   AL   I    +   +           L+ 
Sbjct: 22  TIRFATEASYPPFESVDASNQIVGFDIDLANALCKQI---QATCTFSNQAFDSLIPGLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D +    D T  R     ++F    Y +   FI  K   ++ ++ L G  + VQ GT
Sbjct: 79  RRYDAVIAGMDITPER--QQQVSFTQPYYENSALFIAQK-DKLADIAALKGKRVGVQNGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L D  K        + ++  +      +  R DA  GD + +       + P+  
Sbjct: 136 THQKYLLDKHK----DITVVPYDSYQNAVLDLKNGRLDAVFGDTAVVNEWL--KENPNLA 189

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHY 246
            +   +  K      L  A+ Q + E     +    
Sbjct: 190 SVGTKVTDKDYFGIGLGIAVRQNNDELVKKFNDALN 225


>gi|225620484|ref|YP_002721741.1| family 3 extracellular solute-binding protein [Brachyspira
           hyodysenteriae WA1]
 gi|225215303|gb|ACN84037.1| extracellular solute-binding protein, family 3 [Brachyspira
           hyodysenteriae WA1]
          Length = 261

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 93/251 (37%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K+  V IL  + +    F +        +++  L  G N     F   + +    GFD
Sbjct: 12  MFKNNIVKILAALSIVLVLFISC----QKKEEKNKLYVGTNAEFEPFEYREGD-QIVGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D     +  I  +   I+ + +       AL++K+IDI++     T  R+    + F  
Sbjct: 67  MDLIAEAAKLIGKE---IEIVDMQFDGLLPALEAKKIDIIAAGMTATEERKKF--VNFTD 121

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  ++H     I     L G ++ V  G T +L +++         +   +   
Sbjct: 122 PYYESKQTILVHSDNKDIYGFDSLEGKNVGVVLGYTGDLIVSEM-----SNVNVQRYSAT 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A ++ + DA   D          N+     + L D +S    A A+ + DTE   
Sbjct: 177 SEAVIALKSQKVDAVVLDSEPAKQYFNQNNDLKLVISLTDEVSSEEYAIAMRKEDTELLA 236

Query: 240 IVSWTHYAMVT 250
            ++     +  
Sbjct: 237 QMNEALKTLKE 247


>gi|86741500|ref|YP_481900.1| extracellular solute-binding protein [Frankia sp. CcI3]
 gi|86568362|gb|ABD12171.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Frankia sp. CcI3]
          Length = 319

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 21/231 (9%)

Query: 31  KKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP---SKIQYLPLNAK 86
           + RG+L+ GI T       +       +GFDV   RA+++AIF        +Q+  +   
Sbjct: 59  RDRGYLRVGIATDAPPAGLMNWRTLRLEGFDVGIARAVAAAIFGAERVDDHVQFRAVTTS 118

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           ER   L+S  +D+L      T  R+  +   F  + Y      ++ +  G   ++ L G 
Sbjct: 119 EREDLLRSGMVDMLVATMTITCERKRQVR--FSDVYYESTLRLLVRENAGFRGIADLVGR 176

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +C  AG+T+   LA           P+   R+ +   A +    DA  GD   L  L  
Sbjct: 177 PVCSSAGSTSSEKLARLPA---PGPRPVTRARLADCLVALQHGDVDAIAGDDVLLAGLAA 233

Query: 207 TND-----RPSEHVILPDIISK--SPLAPAII-----QGDTEWYNIVSWTH 245
            +       PS      +   +   P   A+       GD E+   V+   
Sbjct: 234 QDPYTTVLGPSAFGADFEAGGRLDEPYGIAMPITGDTAGDDEFVAFVNGVL 284


>gi|325697006|gb|EGD38893.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK160]
          Length = 287

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFK--GSDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +   +   ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|307154138|ref|YP_003889522.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
 gi|306984366|gb|ADN16247.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
          Length = 297

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 87/242 (35%), Gaps = 13/242 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FD 73
           F +     ++L  I++ G L  G     + F      G+W G+ VD  + +   +   F+
Sbjct: 40  FPAQVDAETVLEKIQRTGELNAGARIDAIPFGYKTDKGEWTGYSVDLLKLIQQDLEKKFN 99

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            P K+    +    RF A++ ++++I+   T  T  R     + F    +  G  F++  
Sbjct: 100 KPIKLNLKEVTIDSRFQAIEKQEVEIVCGATTVTQQR--LEKVDFSLPFFMTGSQFLVKL 157

Query: 134 KKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           +   +      L   SI     TTT+  +   +     +         EE     +    
Sbjct: 158 EDAANFDINGTLKDVSIAYIPHTTTDEIIRQIYPFARWQ----PVRNREEGVKKLKQGAV 213

Query: 192 DAYTGDISALYALKLTNDR-PSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            A   D   L    +     P +  I+P+  ++    A  + + + EW   V  T  +  
Sbjct: 214 TAVVSDGILLVGEIVRQGNEPRDFEIMPNVPMTTELYACILPKNNPEWQEFVDQTISSQN 273

Query: 250 TA 251
            A
Sbjct: 274 NA 275


>gi|227505906|ref|ZP_03935955.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium striatum ATCC 6940]
 gi|227197534|gb|EEI77582.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Corynebacterium striatum ATCC 6940]
          Length = 355

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 10/208 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI KRG +  G++      +    A+G+ +GF+VD  R ++  IFDDP+K+ +  + + E
Sbjct: 93  DIYKRGRIIVGVDRSNNLMSYRDTASGEVRGFEVDIAREIARDIFDDPNKVDFRFVESSE 152

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL  + +DI+ R    +  R+  +   F           ++    GI S+   +G +
Sbjct: 153 RTSALNERSVDIVIRTMSISAERQREVA--FSAPYMTTKTKLLVLSSSGIRSIDDTAGKT 210

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C   G+T    + D  +      + +      +   A + ++ D    D + L  +   
Sbjct: 211 LCAVQGST----IVDTVRREASTSNILQTRSWGDCLMALQLNQIDGVVADDALLSGMLAQ 266

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +       I+   ++      A+ + D+
Sbjct: 267 DS---YTSIVGAPLTSEDYGVAVRKPDS 291


>gi|294792996|ref|ZP_06758142.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 6_1_27]
 gi|294455941|gb|EFG24305.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 6_1_27]
          Length = 274

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 97/326 (29%), Gaps = 67/326 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M      ++L    +  +          +   +   + G +     F      +G   GF
Sbjct: 14  MKFKKIAALLGAFTIASSLLIAGCG--QEGNSQKAWRVGTDATYAPFGFKDKDSGKLAGF 71

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+++    +        LN      ALQS  IDI   +   +  R     + F 
Sbjct: 72  DIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--SVDFS 126

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G G +++     I+S   L G  I V  G+T     +    A   +++ IV   
Sbjct: 127 KPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVHQFNIIV--- 183

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +    D    D            +     +  +    +PL  A+ +G+TE  
Sbjct: 184 --DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNTELL 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N ++                                               GL K     
Sbjct: 241 NKIND----------------------------------------------GLAK----- 249

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR 324
            I+  G Y E++ +  G +   ++ R
Sbjct: 250 -IKANGKYAEIYKKWFGKEPPAEVLR 274


>gi|115352500|ref|YP_774339.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia ambifaria AMMD]
 gi|170703755|ref|ZP_02894470.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria IOP40-10]
 gi|115282488|gb|ABI88005.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|170131338|gb|EDS99950.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria IOP40-10]
          Length = 258

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 77  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKHVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTVIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINKAL 233


>gi|237732342|ref|ZP_04562823.1| ABC transporter histidine/lysine/arginine/ornithine transporter
           subunit [Citrobacter sp. 30_2]
 gi|283832260|ref|ZP_06352001.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Citrobacter youngae ATCC 29220]
 gi|226907881|gb|EEH93799.1| ABC transporter histidine/lysine/arginine/ornithine transporter
           subunit [Citrobacter sp. 30_2]
 gi|291071901|gb|EFE10010.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Citrobacter youngae ATCC 29220]
          Length = 260

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  ++  L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKDSAIQPTIESLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKDDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|116513459|ref|YP_812365.1| amino acid ABC transporter periplasmic protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092774|gb|ABJ57927.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 270

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 78/258 (30%), Gaps = 26/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49
           M K     +  L +    +     S              ++  +G L  G+      ++ 
Sbjct: 1   MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G   GF+VD  +A++  +       +++P         L S + D++  N   T  
Sbjct: 61  R-KSGKLTGFEVDLGKAVAKKLGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+      F     +     I  K   ++ +SQ+ G       GT     +         
Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227
           K   +         +  R  R D       A YA    ++   +  +        P  ++
Sbjct: 169 KGTIVPSGEFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227

Query: 228 PAIIQGDTEWYNIVSWTH 245
               + +T+  +  +   
Sbjct: 228 ALFNKKNTKLLSKFNKAL 245


>gi|218510513|ref|ZP_03508391.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli Brasil 5]
          Length = 201

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 4/194 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   F   ++ L+     S       S L ++  RG L  G  +    +    A+   +G
Sbjct: 10  MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 69

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD    ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF
Sbjct: 70  FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 127

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y +G G ++      +  + L  A           +       A   +     +E 
Sbjct: 128 TIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYES 187

Query: 179 VEEIDAAYRAHRCD 192
           V+ I  A  + R D
Sbjct: 188 VDLIYQALESGRAD 201


>gi|154175519|ref|YP_001409168.1| hook assembly protein [Campylobacter curvus 525.92]
 gi|153793248|gb|EAT99524.2| hook assembly protein, flagella [Campylobacter curvus 525.92]
          Length = 250

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 69/246 (28%), Gaps = 20/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++L   ++     +  A  + D    G L          F+      +  GFD
Sbjct: 1   MK---IANLLKFAVILALGLNLQAKTIKD----GVLTVATEGTYAPFSFYNEKNELTGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +     KI++             + + D +      T  R+      F  
Sbjct: 54  VDIARAVAEKL---NLKIEFFATPWDSMLAGFDAGKADAVFNQMSPTDERKK--KYDFSK 108

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+ K    I + + L G      A +           A       +V +  
Sbjct: 109 PYTVVYGAIIVRKDDDSIKNFADLKGKKDADSATSNWAQV------AKKYGAEHVVVDSF 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R D    D    Y             I      K   A A+ +G+ E  +
Sbjct: 163 AKSMELLFSGRVDCVIRDNIVFYDFIKERPDAPV-KIAATSEEKDYTAAAVQKGNEELVS 221

Query: 240 IVSWTH 245
            ++   
Sbjct: 222 AINKAL 227


>gi|17546822|ref|NP_520224.1| amino-acid-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17429122|emb|CAD15810.1| probable amino-acid-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 267

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 74/228 (32%), Gaps = 14/228 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
             +A  L +I+K G ++  I      F  +  +   +G+D+D    ++  +      +  
Sbjct: 28  PAHADALANIQKAGVIRVAIPNDFPPFGSLGTDLKLQGYDIDMANLVAKELGVKAELVP- 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             + +  R   L + ++D++  +      R     + F        +     K   I + 
Sbjct: 87  --VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDVSIKTP 142

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G +I V  G+T +L L     A         +E       +Y   +    T     
Sbjct: 143 ADLAGKTIGVTRGSTEDLALTAVAPA---SATIKRYEDNNATAQSYLIGQVQLVTLGNIV 199

Query: 201 LYA--LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             A   +    +      + D     P    + +G+      V+    
Sbjct: 200 ANAVNERTRLRQLDVKFPVEDT----PCYVGVAKGEPALLEKVNAAIT 243


>gi|302188858|ref|ZP_07265531.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 260

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGVSTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ A   + R DA   D+       L +   +++     +   +  +  A  I +G+ E
Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAKGNKE 225

Query: 237 WYNIVSWTHYAM 248
              ++     AM
Sbjct: 226 LKALLDKGIKAM 237


>gi|168178600|ref|ZP_02613264.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
 gi|226948448|ref|YP_002803539.1| polar amino acid uptake ABC transporter amino acid-binding protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|182671327|gb|EDT83301.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum NCTC 2916]
 gi|226841377|gb|ACO84043.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 274

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 77/253 (30%), Gaps = 10/253 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59
           +K  F+S+  L++    + +  A     IK+    +K G +     F  +   +   +GF
Sbjct: 6   FKKIFLSM-SLVVALGVALTACAQKNKQIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    +       P    +   +       L + +ID ++     T   +      F 
Sbjct: 65  EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177
               + G      K    I S+  L G ++  Q GT    ++ DY   +         + 
Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +       R DA   D  A       +    +    P    ++         + E 
Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239

Query: 238 YNIVSWTHYAMVT 250
              ++     M  
Sbjct: 240 IEKINKALDDMKN 252


>gi|149375977|ref|ZP_01893743.1| extracellular solute-binding protein, family 3 [Marinobacter
           algicola DG893]
 gi|149359614|gb|EDM48072.1| extracellular solute-binding protein, family 3 [Marinobacter
           algicola DG893]
          Length = 252

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M   +  ++   + L   + + +A           L+   +   V F  +    G+  GF
Sbjct: 1   MSTKWLKTVGATLALTVAAGTASAET---------LRVVTDPSFVPFEMMDQETGEMIGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  R ++     +   I    ++      ALQ+  +DI       T  RE    + F 
Sbjct: 52  DMEIIREVADRAGFE---IDLNTMDFNGIIPALQTGNVDIAIAGITITEEREEI--VDFS 106

Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++ +    +  +S L G  I  + G+T+   L      ++       +  
Sbjct: 107 DPYYDSGLRILVRQDNGKVGEISDLEGVKIGTKIGSTSYDYLMKTLDKNDG---VTPYPG 163

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             ++  A  +   DA   D         +     +   +  +        A+  G +EW 
Sbjct: 164 SSDMYMALMSGAVDAVFYDAP-NVGYFASTRGEGKVKTVGKLYEGQQYGIALKNG-SEWV 221

Query: 239 NIVSWTH 245
           + V+   
Sbjct: 222 DDVNEAL 228


>gi|300936887|ref|ZP_07151774.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 21-1]
 gi|300457998|gb|EFK21491.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 21-1]
          Length = 260

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
            F ++    A+I  +I      + G +     F    + G+  GFD+D  + L   I   
Sbjct: 13  AFSSATVAFAAIPQNI------RIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI--- 63

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            ++  ++         +L++K+ID +  +   T  R     +AF    Y      ++ K 
Sbjct: 64  NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKN 121

Query: 135 KGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             I  +V  L G  + V  GTT E    +++    +    + ++  + I +   A R DA
Sbjct: 122 SDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDA 179

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
              D  A     L      ++      +    L        + + D E    ++   +A 
Sbjct: 180 AFQDEVAANEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAE 238

Query: 249 VTAEELGITQKNINQVSKDTTNPDV 273
           + A+          +++K   + DV
Sbjct: 239 MRAD------GTYEKLAKKYFDFDV 257


>gi|299530123|ref|ZP_07043549.1| glutamate-binding protein precursor [Comamonas testosteroni S44]
 gi|298721780|gb|EFI62711.1| glutamate-binding protein precursor [Comamonas testosteroni S44]
          Length = 300

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 9/230 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66
           +++    +   +   +++    IK+ G L+ G       F+ +   +G  +GFD+   + 
Sbjct: 36  ALVVQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  I  D +K Q+  + +  R   L + Q+D++      T  R     ++F    Y   
Sbjct: 96  ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAE--KISFAGPYYTSQ 153

Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            G ++      + S + L G  +  QAG+T    LA Y            F+  +E   A
Sbjct: 154 SGVLVKSNNKTVQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            R  R DAY  D + L    L+    +  +      ++ P    + +G  
Sbjct: 210 LRQGRVDAYVTDYTLLL-NALSLGTSNARLAGAPFGAQDPYGVGLPKGSD 258


>gi|302189136|ref|ZP_07265809.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae 642]
          Length = 273

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 21/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L+ L  ++     + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1   MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++  +      ++    +         S + DI   +   +  R          
Sbjct: 60  VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174
                    +      I S   LSG  + + + ++ E  L         +  P+      
Sbjct: 116 YYASPAVIVVNATDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175

Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                ++               R DA   +   L   K   D+     +  + + + P +
Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGESLYEEPNS 232

Query: 228 PAIIQGDTEWYNIVSWT 244
            AI + D EW   V   
Sbjct: 233 VAIEKDDPEWDAKVREV 249


>gi|227890364|ref|ZP_04008169.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849178|gb|EEJ59264.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 500

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 87/263 (33%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46
           M K    S    +++FF+  +                 SIL  IKK G L  G +     
Sbjct: 4   MKKTKLFSFFFALLMFFSLGATFIKPAQAANQKQVAEGSILKKIKKSGELVVGTSADYPP 63

Query: 47  FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
                       + G D++  R ++  +      +    ++     +AL++ ++D++   
Sbjct: 64  LEFTTSENGKTKYVGVDIELARDIAKDLGVK---LVIKNMSFDSLLVALETGKVDMVISA 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLAD 162
              T  R+ S+  +            +  K     +S+  L G ++  Q G+     +  
Sbjct: 121 MTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKYTSIQSLKGQTVGAQTGSNQYNLVKS 180

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             K            ++  +  A ++ +  A   +   +      N+     V      +
Sbjct: 181 QMK----DSKLKGLGKINNLVLALQSGKVSAVVVEE-LIAKAYAENNSGLAAVRSNLKET 235

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
           ++  A AI +G  +    V+ T 
Sbjct: 236 QAGNAVAIAKGQDDLVAQVNKTI 258


>gi|170756679|ref|YP_001780804.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum B1 str. Okra]
 gi|169121891|gb|ACA45727.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum B1 str.
           Okra]
          Length = 274

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 10/251 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59
           +K  F+S+  L++    + +  A    +IK+    +K G +     F  +   +   +GF
Sbjct: 6   FKKIFLSM-SLVVALGVALTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    +       P    +   +       L + +ID ++     T   +      F 
Sbjct: 65  EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177
               + G      K    I S+  L G ++  Q GT    ++ DY   +         + 
Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +       R DA   D  A       +    +    P    ++         + E 
Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239

Query: 238 YNIVSWTHYAM 248
              ++     M
Sbjct: 240 IEKINKALDDM 250


>gi|194442881|ref|YP_002041617.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|197249041|ref|YP_002147314.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|200387069|ref|ZP_03213681.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|194401544|gb|ACF61766.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|197212744|gb|ACH50141.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|199604167|gb|EDZ02712.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 260

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +++ L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTIASLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|154684847|ref|YP_001420008.1| YckK [Bacillus amyloliquefaciens FZB42]
 gi|154350698|gb|ABS72777.1| YckK [Bacillus amyloliquefaciens FZB42]
          Length = 265

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 75/260 (28%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K  F   + + I    +          S +  +   +KK+G L  G       F    
Sbjct: 1   MKKALFALFMMVSIAMLAACGNSQDSGSKSKDGDLWASVKKKGVLTVGTEGTYEPFTFHD 60

Query: 52  AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
                  G+DV+  + ++  +        +        F  L +K+ D+++     T   
Sbjct: 61  KKTDKLTGYDVEVIQEVAKRLGLKAD---FKETQWDSMFAGLNAKRFDVVANQVGKTG-- 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                  F           +  K   I+  + + G +   Q+ T+    LA    A    
Sbjct: 116 -RENQYDFSDKYTTSNAVVVTKKDSTIAKEADVKGKT-AAQSLTSNYNKLAKEAGAK--- 170

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 E + +     +  R D    D  A+     T+   +  +       +     A 
Sbjct: 171 --IEGVEGMAQSLQLIQQGRADLTYNDKLAVLNYLKTSGNKNVKIAFEAGQPQQTY-FAF 227

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            +G  E    V+     M  
Sbjct: 228 RKGSGELVTHVNKALKEMKE 247


>gi|282849177|ref|ZP_06258562.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Veillonella parvula ATCC 17745]
 gi|282580881|gb|EFB86279.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Veillonella parvula ATCC 17745]
          Length = 261

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 97/326 (29%), Gaps = 67/326 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M      ++L    +  +          +   +   + G +     F      +G   GF
Sbjct: 1   MKFKKIAALLGAFTIASSLLIAGCG--QEGNSQKAWRVGTDATYAPFGFKDKDSGKLAGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+++    +        LN      ALQS  IDI   +   +  R     + F 
Sbjct: 59  DIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--SVDFS 113

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G G +++     I+S   L G  I V  G+T     +    A   +++ IV   
Sbjct: 114 KPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVHQFNIIV--- 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +    D    D            +     +  +    +PL  A+ +G+TE  
Sbjct: 171 --DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNTELL 227

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N ++                                               GL K     
Sbjct: 228 NKIND----------------------------------------------GLAK----- 236

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR 324
            I+  G Y E++ +  G +   ++ R
Sbjct: 237 -IKANGKYAEIYKKWFGKEPPAEVLR 261


>gi|330937539|gb|EGH41481.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 219

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 16/222 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           +++ +   + R DA   D+       L +   +++ +   I 
Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPID 207


>gi|227112029|ref|ZP_03825685.1| arginine-binding periplasmic protein 2 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 243

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  I    T+                ++   +     F  + A+ +  GFD
Sbjct: 1   MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ ++ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S  + + G  I ++ GTT +  + D           + ++  +
Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +         P    +   +         L  A+   D  
Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KASPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLEKLNKALDAI 227


>gi|295093670|emb|CBK82761.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Coprococcus sp. ART55/1]
          Length = 265

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 23/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + ++  + L             S + S L  +K +G L  G+ T          
Sbjct: 1   MKKLLSLLLVAAMGLSLVGCGGSDNGSKSESKSDLEYVKDKGTLVVGV-TDFAPMDYKDE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G+W GFD D   A + ++        ++ ++   + + L  K ID +      T   E+
Sbjct: 60  SGNWIGFDADMASAFAESLGVKAE---FVEIDWDNKIMELDGKTIDCVWNGMTLTD--EV 114

Query: 113 SLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +  +A       + Q  I+   K     +V  +   +  V+AG+  E    D  KA  + 
Sbjct: 115 TSSMACSDAYCNNAQVVIVPNDKADKYQTVDSIKELTFAVEAGSAGE----DQAKALGLN 170

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
           Y  +  +   +      A   DA   D S + A  +      + +     ++        
Sbjct: 171 YTAVKAQ--ADALMEVAAGTSDAAIID-SLMAAAMVGEGTGYDKLTYTVGLNSEEYGVGF 227

Query: 231 IQGDTEWYNIVSW 243
            +       +  +
Sbjct: 228 RKDSDLVAELNKF 240


>gi|239834992|ref|ZP_04683320.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823055|gb|EEQ94624.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 288

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 34/274 (12%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + I+  ++    +   +A           ++ G       F  +  +G  KGFD+D   A
Sbjct: 31  MGIVAALVAVCGALPAHAE---------EIRMGAEGAYAPFNYLDPSGQLKGFDIDVGNA 81

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +  D     +          ALQSK+ DI++ +   T  R     ++F    Y++ 
Sbjct: 82  ICEKLKAD---CVWSANEWSGIIPALQSKKFDIMASSMAITESR--MQQVSFSDPYYYNT 136

Query: 127 QGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
             F+  K+ G+   +     G  I  Q G+     L  +F  +       ++  +EE   
Sbjct: 137 MRFVALKELGLKDVTPESAKGKVIGTQTGSIAFDALQRFFPNN----EVKLYPTLEEAFL 192

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDTEWYNI 240
                R D       AL           E      +L   +       A  + D E    
Sbjct: 193 DIENGRIDLLLESKFALSDWIKKGADCCEFVGNEFLLDGTLGA---GMAFRKDDVELRTR 249

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           V+     ++          + +++S    + D++
Sbjct: 250 VNKALAEII-------RDGSYDKISARYFDFDIR 276


>gi|16765681|ref|NP_461296.1| histidine transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56412749|ref|YP_149824.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|167993041|ref|ZP_02574136.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168229729|ref|ZP_02654787.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168237378|ref|ZP_02662436.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168242478|ref|ZP_02667410.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168261624|ref|ZP_02683597.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168465936|ref|ZP_02699806.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168817910|ref|ZP_02829910.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194450048|ref|YP_002046409.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194472399|ref|ZP_03078383.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194734670|ref|YP_002115424.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197263084|ref|ZP_03163158.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197361683|ref|YP_002141319.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243211|ref|YP_002216426.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|204929077|ref|ZP_03220220.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205353469|ref|YP_002227270.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857772|ref|YP_002244423.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|238912366|ref|ZP_04656203.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|123170|sp|P02910|HISJ_SALTY RecName: Full=Histidine-binding periplasmic protein; Short=HBP;
           Flags: Precursor
 gi|47718|emb|CAA24658.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|47731|emb|CAA24659.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|154125|gb|AAA75578.1| J protein [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420897|gb|AAL21255.1| histidine transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56127006|gb|AAV76512.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|194408352|gb|ACF68571.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194458763|gb|EDX47602.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194710172|gb|ACF89393.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631393|gb|EDX49953.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197093159|emb|CAR58603.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197241339|gb|EDY23959.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197289687|gb|EDY29050.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197937727|gb|ACH75060.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|204321621|gb|EDZ06820.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205273250|emb|CAR38213.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205328806|gb|EDZ15570.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205335763|gb|EDZ22527.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205338344|gb|EDZ25108.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205345077|gb|EDZ31841.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205349622|gb|EDZ36253.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206709575|emb|CAR33920.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261247560|emb|CBG25387.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267994454|gb|ACY89339.1| histidine transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158912|emb|CBW18425.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913345|dbj|BAJ37319.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320086789|emb|CBY96561.1| Membrane-bound lytic murein transglycosylase F Murein lyase F;
           Flags: Precursor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321222945|gb|EFX48016.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322617099|gb|EFY14005.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322617595|gb|EFY14494.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322624775|gb|EFY21604.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322630325|gb|EFY27095.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322634505|gb|EFY31238.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322639216|gb|EFY35908.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322640079|gb|EFY36746.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322645701|gb|EFY42225.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652065|gb|EFY48428.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656237|gb|EFY52534.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659389|gb|EFY55636.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665849|gb|EFY62032.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669912|gb|EFY66053.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673897|gb|EFY69994.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678656|gb|EFY74712.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322683549|gb|EFY79563.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322687624|gb|EFY83594.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323130685|gb|ADX18115.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323193541|gb|EFZ78746.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323198448|gb|EFZ83550.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204560|gb|EFZ89563.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208502|gb|EFZ93441.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213640|gb|EFZ98429.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323218325|gb|EGA03035.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222920|gb|EGA07269.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224505|gb|EGA08787.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323232320|gb|EGA16423.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323235646|gb|EGA19730.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323241194|gb|EGA25230.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244936|gb|EGA28938.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323250055|gb|EGA33949.1| histidine ABC transporter substrate-binding protein HisJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323253839|gb|EGA37664.1| histidine ABC transporter substrate-binding protein HisJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323254976|gb|EGA38767.1| histidine ABC transporter substrate-binding protein HisJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323259837|gb|EGA43469.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264142|gb|EGA47649.1| histidine ABC transporter substrate-binding protein HisJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323270840|gb|EGA54278.1| histidine ABC transporter substrate-binding protein HisJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326624178|gb|EGE30523.1| histidine transport protein [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326628561|gb|EGE34904.1| histidine ABC transporter ATP-binding protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
 gi|223500|prf||0809313B protein hisJ
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|310658911|ref|YP_003936632.1| amino acid ABC transporter amino acid-binding protein [Clostridium
           sticklandii DSM 519]
 gi|308825689|emb|CBH21727.1| amino acid abc transporter, amino acid-binding protein [Clostridium
           sticklandii]
          Length = 266

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 97/260 (37%), Gaps = 21/260 (8%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKA 52
           M K    + +  L++L F   S++A    S +  IK++G +  G +     +     +  
Sbjct: 1   MKKKLMGLGVAILMVLSFVGCSSSAEEEKSAVEMIKEKGKIVVGTSADYPPYEFHKEING 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
              + GFD+   + ++  +  +   ++ + +       AL  K+ID ++   + T  R+ 
Sbjct: 61  VDTYVGFDIAIAQKIAEDMGVE---LEIVDMKFDGLLAALTGKKIDFIAAGMNPTEERKK 117

Query: 113 SLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              + F  + Y      ++   K   + +     G  + VQ GT  E      F      
Sbjct: 118 --SVDFSIVYYDAHSTMLVAADKVDMLKAPEDFKGLKVGVQKGTIQEEIADTQFP----D 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +   ++  +    ++ + D        + A    +   S  V   D+ S+  +A AI
Sbjct: 172 SEKVAISKIPNLIMELQSGKIDGIILAE--VVAKSYADANESIAVNNLDLGSEGGVALAI 229

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            +   +  + ++ T   ++ 
Sbjct: 230 NKNQEDLLSQINSTLETIIE 249


>gi|325063881|gb|ADY67571.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 279

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 92/251 (36%), Gaps = 11/251 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             V +   ++   T     A  L + K  G +  GI      +  + ++G  +G+D D  
Sbjct: 14  IAVGLAAALLPILTPAGAEARTLEEAKSSGKIIIGIQGDNAPWGFINSSGVQEGYDADLA 73

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R  +  +     K++++PL    R  +L++ ++D L  +   T  R     + +      
Sbjct: 74  RGFADYLG---LKVEFVPLAVANRIPSLRTGKVDALFASMGMTPERAK--NVQYAQPYAH 128

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           +       K K I++   L+G ++     +  +  L         K   + F+       
Sbjct: 129 NVMSVYATKDKKIANFDDLTGMTVGAPKSSPMDTALTAGA---GTKAKILRFDDDAATIQ 185

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A  + + +A  G+    Y  +L      ++ +  D+++    + A   G+ +W   ++  
Sbjct: 186 AILSGQIEAIGGN--QFYGDRLAAAGGKDYEVKFDLVTL-YNSAATRPGEKDWNEALNAW 242

Query: 245 HYAMVTAEELG 255
                   EL 
Sbjct: 243 LDKAKANGELA 253


>gi|323171993|gb|EFZ57637.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli LT-68]
          Length = 251

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +T    F+   A GD+ GFD+D    +   +     K  ++  +      +L++
Sbjct: 18  TVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKA 74

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      I  K   I      L G  + V  G
Sbjct: 75  KKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQG 132

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T E    + +++  +    + +   + + +   A R DA   D  A     L      +
Sbjct: 133 STQEAYANETWRSKGVD--VVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKD 190

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                  +             + + D E     +          EL       ++++K  
Sbjct: 191 FAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKAL------GELRQDGT-YDKMAKKY 243

Query: 269 TNPDV 273
            + +V
Sbjct: 244 FDFNV 248


>gi|134292118|ref|YP_001115854.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134135275|gb|ABO56389.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 262

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++IL        +       L   K+   ++ G++     F     +G  +GFD
Sbjct: 1   MKNKTRITILLSAATMAFA------TLASAKEWTTIRIGVDPTYPPFESTATDGSVQGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +    +K  ++  +       LQ+++ D++  +   T  R     + F  
Sbjct: 55  VDLGNALCAKL---NAKCVWVSSSFDGLIPGLQARKFDVILSSMAATEQR--RQQIDFTD 109

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y +    I       +   ++L+G  I V+ GT  E    + +         + +   
Sbjct: 110 RLYRNQTRLIARTGAGLLPDAAKLAGKRIAVEQGTIQETYAREKWAPAK--VEVVPYPSY 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAIIQGD 234
           ++  A     R D    D        L   R               I  +  A  + + D
Sbjct: 168 DQAYADLVTGRIDGVLMDAVQGQLGFLATPRGKGFSFAGGVVFDPRIMGNGDAIGVRKAD 227

Query: 235 TEWYNIVSWTH 245
           T+  + ++   
Sbjct: 228 TDLRDALNRAI 238


>gi|322387683|ref|ZP_08061292.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus infantis ATCC 700779]
 gi|321141550|gb|EFX37046.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus infantis ATCC 700779]
          Length = 481

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 16/226 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +        A       ++       ++    F    ++  + G D
Sbjct: 1   MKKKILACLLILFPILSLGI-AKADT-----EKTKYVIASDSSFAPFVFQDSSNQYTGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +   I+           A+QS Q D +      T  R+ +    F  
Sbjct: 55  MDLIKAIAEDQGFE---IEITNPGFDAAINAVQSGQADGIIAGMSVTDARKET--FDFSD 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       + +   ISS   L+G ++ V+ GT ++  L +    +  K     F    
Sbjct: 110 SYYTANTILGVKESSTISSYEDLNGKTVGVKNGTASQTFLTENQSKYGYK--IKTFSDAA 167

Query: 181 EIDAAYRAHRCDAYTGDISAL---YALKLTNDRPSEHVILPDIISK 223
            +  +      DA   D   +    +       P     + +    
Sbjct: 168 SMYDSLNTGSIDAVMDDEPVIKYSISQGQKLKTPIAGTPIGETAFA 213


>gi|320143581|gb|EFW35361.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
          Length = 467

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 17/260 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T+ +        IK+RG L+ G++           V    ++ G D+D  + ++     +
Sbjct: 7   TAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---N 63

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++ + ++      AL++ +IDI+      T  R+    + F           ++ K 
Sbjct: 64  NLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QVDFSDSYMMTKNIMLVKKD 121

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                  +   +   +  Q GT  E       +            R+ ++  A ++ + +
Sbjct: 122 KVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVE 177

Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
               +     A    N +    +V   +    + +A  + +   +  + ++ T   +   
Sbjct: 178 GAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDK 235

Query: 252 EELGITQKNINQVSKDTTNP 271
             +     N      D +  
Sbjct: 236 GLIDKYMTNAANAMNDDSGF 255


>gi|302189022|ref|ZP_07265695.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 258

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 78/245 (31%), Gaps = 23/245 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +  S+++L G  I VQ GT  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTKVSDSLAELKGKKIGVQRGTIHERFAREVLAPQG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D    +  +      +         A+ +GD
Sbjct: 164 NEIYLDISAGRLDGTIADATLLQDGFLKTDAGKGYAFVGPSFFDAKYFGDGIGIAVRKGD 223

Query: 235 TEWYN 239
               +
Sbjct: 224 KANLD 228


>gi|149190470|ref|ZP_01868741.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio shilonii AK1]
 gi|148835724|gb|EDL52690.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio shilonii AK1]
          Length = 258

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 73/245 (29%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K     I+    L     +   S L  I   G L+ G                 ++GF
Sbjct: 1   MKKWILGFIIT--FLSIGQVAAETSRLQKILDSGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D+ + +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYDM-TGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                          +  S  +        +    GT  E  + D+F         IV E
Sbjct: 115 YFYLAFVPVVQKKDLEKFSDWADFNKPDVKVAATLGTVQEKMVKDFFPDAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P++  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVTKFKQ-LAIVPVKEPRKPTPISMLLPQSDQVW 229

Query: 238 YNIVS 242
            N V+
Sbjct: 230 INYVN 234


>gi|253991463|ref|YP_003042819.1| amino acid ABC transporter [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782913|emb|CAQ86078.1| similar to amino acid abc transporter [Photorhabdus asymbiotica]
          Length = 257

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 69/246 (28%), Gaps = 14/246 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K     +L   I F    S NA S    IK  G  +         F     +G   GFDV
Sbjct: 2   KILLTLLLASTIQFGIVHSANAESTFDKIKSTGVFRISTEGAYSPFTYHDTSGALTGFDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R ++  +   P    ++          L + + D +      T  R+      F   
Sbjct: 62  DIGREIARRLNVRP---TFIEGKWDGLIAGLDAGRSDAVINQIAITPERKK--KYDFSIP 116

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   I HK    I + S L G +       T     A   + +      I      
Sbjct: 117 YITSQAVLITHKDNNSIKTFSDLRGKTSA----HTLTNNFAQIARHNG--AEIIGTNGFS 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        R +A   D  +    K         ++     +    A  + +G++E    
Sbjct: 171 QEIELVSTGRANATINDNLSYLDYKKHKPNAPVKIVSSHPNTGQ-TAILLRKGESELKAA 229

Query: 241 VSWTHY 246
           +     
Sbjct: 230 IDQAIT 235


>gi|213581359|ref|ZP_03363185.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 201

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 72/211 (34%), Gaps = 19/211 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K ID+       T  R+    + F    
Sbjct: 53  LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      I SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
                  +R DA   D   +     T     
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNGQ 194


>gi|187924663|ref|YP_001896305.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187715857|gb|ACD17081.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 66/248 (26%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L      S +  A  L  IK  G  K G       F     +G   GFD
Sbjct: 1   MKSIRSILLIALFQAVAVSSAFAADELAQIKSAGVFKIGTEGTYAPFTYHDESGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +   P   Q++          L   + D +      T  R+      F  
Sbjct: 61  VEIGTEIAKRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDARKA--KYDFSD 115

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I +   L G        +      A            I  +  
Sbjct: 116 PYITSHAALIVASNNTTIKNFDDLKGKKSANTLTSNFGKIAAA------HGAEVIPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237
            E      + R DA   D  +    K         +   D    S    A  I +G+ E 
Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSADSSDKSAVLIRKGNPEL 229

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 230 QAAINKAL 237


>gi|28871278|ref|NP_793897.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213970887|ref|ZP_03399010.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301383763|ref|ZP_07232181.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302059459|ref|ZP_07251000.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302133661|ref|ZP_07259651.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28854528|gb|AAO57592.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213924410|gb|EEB57982.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|330966542|gb|EGH66802.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|331015690|gb|EGH95746.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKSGVTTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ A   + R DA   D+       L +   +++     +   +  +  A  I QG+ E
Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAQGNKE 225

Query: 237 WYNIVSWTHYAM 248
              ++     AM
Sbjct: 226 LKALLDKGIKAM 237


>gi|170696517|ref|ZP_02887641.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170138564|gb|EDT06768.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 274

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 11/233 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
             L   S + +A  L +I K G ++ G+      F  +  +    G+D+D    +  A+ 
Sbjct: 28  GALSAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVAHLIGRAL- 86

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +K++ + +    R   L   + D+L      T  RE    + F              
Sbjct: 87  --NAKVELVQVTGDNRMAYLADHKTDMLLS-VGQTPEREKV--IDFSKPYAPYYLAVFGP 141

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   + + + L+G SI V  GT  +L++           +   F+      +A+ + +  
Sbjct: 142 KALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAFISGQVQ 198

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                      +      P+        +  SP    + + +      V  T 
Sbjct: 199 LMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVDETI 249


>gi|121608571|ref|YP_996378.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121553211|gb|ABM57360.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 258

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 82/261 (31%), Gaps = 15/261 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K          +    + +  A  L +I++ G +          F     +    G
Sbjct: 1   MKLFKAVAAIATVTALTLCATSAALARTLDEIRQDGKIVIATEGQFAPFNFFNGS-TLTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D    +   +      I++  L        L+  + D++  +   +  R     + F
Sbjct: 60  FEMDVAELVVKKMG---LTIEWKALGFDALLTGLRQGRWDLVIASHGISEERAK--AVTF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               ++   G I+     I S   L+G  + VQ GT+    +               F  
Sbjct: 115 TAP-HYCSGGMIIALDPAIKSAKDLAGKVVAVQTGTSYLENVQKVAAIK----EVKNFPT 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +  +A  + R DA+  D     A  +    P     L D++    +A A+ +G+    
Sbjct: 170 DNDARSALNSRRVDAWVTDR--FVAKAVAEKNPGAGFQLGDMLFIEQIAAAVSKGNGSLA 227

Query: 239 NIVSWTHYAMVTAEELGITQK 259
              +     ++         K
Sbjct: 228 AAWNKALAEVMADGSYAAVSK 248


>gi|576158|pdb|1HSL|A Chain A, Refined 1.89 Angstroms Structure Of The Histidine-Binding
           Protein Complexed With Histidine And Its Relationship
           With Many Other Active Transport(Slash)chemosensory
           Receptors
 gi|576160|pdb|1HSL|B Chain B, Refined 1.89 Angstroms Structure Of The Histidine-Binding
           Protein Complexed With Histidine And Its Relationship
           With Many Other Active Transport(Slash)chemosensory
           Receptors
 gi|999843|pdb|1HPB|P Chain P, The Bacterial Periplasmic Histidine-Binding Protein:
           Structure(Slash)function Analysis Of The Ligand-Binding
           Site And Comparison With Related Proteins
          Length = 238

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 5   KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 61

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L G  + V  G
Sbjct: 62  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 119

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 120 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 177

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 178 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 230

Query: 269 TNPDV 273
            + DV
Sbjct: 231 FDFDV 235


>gi|323438846|gb|EGA96583.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           O11]
          Length = 467

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 17/260 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T+ +        IK+RG L+ G++           V    ++ G D+D  + ++     +
Sbjct: 7   TAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---N 63

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++ + ++      AL++ +IDI+      T  R+    + F           ++ K 
Sbjct: 64  NLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QVDFSDSYMMTKNIMLVKKD 121

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                  +   +   +  Q GT  E       +            R+ ++  A ++ + +
Sbjct: 122 KVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVE 177

Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
               +     A    N +    +V   +    + +A  + +   +  + ++ T   +   
Sbjct: 178 GAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDK 235

Query: 252 EELGITQKNINQVSKDTTNP 271
             +     N      D +  
Sbjct: 236 GLIDKYMTNAANAMNDDSGF 255


>gi|283786383|ref|YP_003366248.1| histidine ABC transporter, substrate-binding periplasmic protein
           [Citrobacter rodentium ICC168]
 gi|282949837|emb|CBG89460.1| histidine ABC transporter, substrate-binding periplasmic protein
           [Citrobacter rodentium ICC168]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KLRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFIENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVTKDSDIQPTVESLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|224369136|ref|YP_002603300.1| GlnH2 [Desulfobacterium autotrophicum HRM2]
 gi|223691853|gb|ACN15136.1| GlnH2 [Desulfobacterium autotrophicum HRM2]
          Length = 250

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 22/252 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F    L ++ L  TS +              +  G +     +    A G + GFD
Sbjct: 1   MKQIF--GFLLMLGLCMTSVANAGDT---------IVVGTSADYPPYEFTDATGAFVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+   I      ++ + +        LQ+K+ID++      +  R     + F  
Sbjct: 50  MDLVRAIGDKIGKK---VKIVDMGFDTLIAGLQNKKIDVVIAAMQASDERRK--KVDFSI 104

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVF 176
             +      ++     I   SV  ++G  +  Q GT  E  + D           +   +
Sbjct: 105 TYHDIKDALLVKADSDIQIKSVYDIAGYKVASQTGTIQEKWIQDNLVKTGKLAAENYFSY 164

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ERV+      +A R D     I A  A+ L      +  ++      +  + A+ +G+T 
Sbjct: 165 ERVDNAAMDVKAGRVDVL--HIIADPAISLAEKNSLKIALITTETVSAGQSLAVTKGNTA 222

Query: 237 WYNIVSWTHYAM 248
             + ++    A+
Sbjct: 223 LLSEINKAIEAL 234


>gi|167585826|ref|ZP_02378214.1| ABC lysine-arginine-ornithine family transporter, periplasmic
           ligand binding protein [Burkholderia ubonensis Bu]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 22  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 79  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 136

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 137 VEQGSTQETYAKAYWEPQG--VTVIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 194

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINQAL 235


>gi|187920626|ref|YP_001889658.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia phytofirmans PsJN]
 gi|187719064|gb|ACD20287.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia phytofirmans PsJN]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    ++G   GFD+D    + + +    +K  ++  +      
Sbjct: 23  KDWSTVRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARM---KAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI   +  L G ++ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQIA--FSNKLFNTPTRLVAKKGSGILPTADSLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEPKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   +    +        + + DT+    V      ++
Sbjct: 196 RGAGFDFVGKNLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240


>gi|261885182|ref|ZP_06009221.1| arginine-binding periplasmic protein 1 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 241

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 84/255 (32%), Gaps = 26/255 (10%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           FF  I    I    S + +            ++ G N     F  +  +    GFD+D  
Sbjct: 2   FFKFIGGACIAAGFSHAAD-----------VIRVGTNATYPPFEFIDEHTKIAGFDMDLI 50

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            ALS  +  +    + + ++      AL++ +ID ++     T  R  +      P    
Sbjct: 51  DALSKKVGFEY---KIVNMSFDALIPALKAGKIDAVATAMSATPDRHKASQFYQSPYYNT 107

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           +       K   ++S   L G  I VQ GT  E+               +  E +     
Sbjct: 108 EILFIKQAKNGDLTSKQNLDGKKIAVQLGTVQEIAARAM-----KGVKVMANEDIFAAIM 162

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A +  + DA   D S  Y     N   +E   L +         +I     +  ++V+  
Sbjct: 163 ALKNGKVDAVLVDSSIGYGYLNKNKDLAEF--LKEPDGSE--GFSIAFDKNKHTDLVAKI 218

Query: 245 HYAMVTAEELGITQK 259
           + A+   EEL     
Sbjct: 219 NQAV---EELKSDGT 230


>gi|224369394|ref|YP_002603558.1| GlnH3 [Desulfobacterium autotrophicum HRM2]
 gi|223692111|gb|ACN15394.1| GlnH3 [Desulfobacterium autotrophicum HRM2]
          Length = 248

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 75/248 (30%), Gaps = 23/248 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K     +  ++I  F +     +          +    +T    F       G   GF
Sbjct: 1   MKKQTAFVLTLMMICCFAATGFAKN----------ITVATDTNFPPFEFKDPKTGHHTGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+   A++  +  +       P++       LQS Q+D           R     + F 
Sbjct: 51  DVELWNAIAQDMGIEYD---LQPMDFNGIIPGLQSGQLDAGIAGITIKPERAKV--VDFS 105

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++   +  I+ V  L G  +  + GTT++  L    KA        ++  
Sbjct: 106 DPYYNAGLLLLVKADRTDITKVEDLEGKVVATKLGTTSDDFLKKNAKAK----EIKLYPN 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            + +         DA   D   +        +    V+ P +           +G     
Sbjct: 162 NDAMFMELMMGGADAVMFDSPVIANYVREVGKDRVKVVGP-LYMGQSYGIGFPKGSP-LV 219

Query: 239 NIVSWTHY 246
           + V+ +  
Sbjct: 220 DKVNKSLK 227


>gi|78059801|ref|YP_366376.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77964351|gb|ABB05732.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 257

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 87/254 (34%), Gaps = 24/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +   +     +           K+   ++ G++     F   K +G+  GF 
Sbjct: 1   MKRIMIGLVALAMSATGFA-----------KEWTTIRIGVDPSYPPFEYKKPSGELTGFG 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++          L++++ D +  +   T  R     + F  
Sbjct: 50  VDLGNEVCRRL---NAKCLWVENAFDGMIPGLKARKFDAILSSMSMTPAR--LKQIDFSN 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            T       ++ K  GI  + + L+G +I V  G+  E     +++        + ++  
Sbjct: 105 KTAHAPTFLVVKKGSGIQPTPASLNGKAIGVLQGSMQETYAKAHWE--GGGARILSYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI----LPDIISKSP-LAPAIIQGD 234
           +++ A     R DA   +        L   +  ++      L D     P     I + D
Sbjct: 163 DQVYADLTNGRLDAALQNGVQASRGFLNTPQGKDYAFAGGELSDPKIFGPGQGIGIRKDD 222

Query: 235 TEWYNIVSWTHYAM 248
           T+  + ++    A+
Sbjct: 223 TDLKDKINTALAAI 236


>gi|270260869|ref|ZP_06189142.1| extracellular solute-binding family 3 protein [Serratia odorifera
           4Rx13]
 gi|270044353|gb|EFA17444.1| extracellular solute-binding family 3 protein [Serratia odorifera
           4Rx13]
          Length = 259

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 83/265 (31%), Gaps = 27/265 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     I    +L   S     +          L+ G+      F    A+G  +GFD+D
Sbjct: 2   KSLKTLIAVGCLLAAGSSLAAENT---------LRFGLEALYPPFESKSASGKLEGFDID 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+ +A      K  ++  +      AL++++ D ++   + T  R     + F    
Sbjct: 53  LGNAVCAAA---QLKCSWVETSFDSLIPALKARKFDAINSAMNVTDQR--RQAIDFTDSI 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y      I     G +     L+G  + V  G+  E     ++    +    + ++   +
Sbjct: 108 YQVPNRLIAKADSGLLPDAKSLAGKHVGVLQGSIQETYAKAHWAPQGVD--VVSYQDQNQ 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTE 236
                 A R DA      +  +  L          + D +S        +A  + +GD  
Sbjct: 166 AYLDLTAGRLDATLVMAPSGQSGFLARPDGKGFAFVGDAVSDDKILGEGIAFGLRKGDDA 225

Query: 237 WYN-----IVSWTHYAMVTAEELGI 256
                   IV       VTA     
Sbjct: 226 LKKKLNDAIVKVKQQGTVTALAKKY 250


>gi|330957730|gb|EGH57990.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G S+  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKSVGYEQGTIQEAYAKAVLDKAGVTTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ A   + R DA   D+       L +   +++     +   +  +  A  I +G+ E
Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAKGNKE 225

Query: 237 WYNIVSWTHYAM 248
              ++     AM
Sbjct: 226 LKALLDKGIKAM 237


>gi|317047526|ref|YP_004115174.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Pantoea sp. At-9b]
 gi|316949143|gb|ADU68618.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. At-9b]
          Length = 243

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 85/250 (34%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L  + +   +                ++   +     F  +       GFD
Sbjct: 1   MKKWIVAAALATLAMNAFAAE-------------KIRFASSATYPPFESLDRENQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T   + S  + F  
Sbjct: 48  IDLAKALCQQM---KAECTFTNNAFDSLIPSLKFRRYDAVISGMDITA--DRSKQVDFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K +  S  SQL G  I ++ GTT +  L +           + ++  +
Sbjct: 103 PYYANSAVVIARKGQF-SDFSQLKGKRIGMENGTTHQKYLLEQHPE----VVAVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN    P    +       + L  A+ +G++E  
Sbjct: 158 NAILDLKNGRLDGVFGDTAVVNQWLKTNADLAPVGAHVTDASYFGTGLGIAVRKGNSELR 217

Query: 239 NIVSWTHYAM 248
           + ++    A+
Sbjct: 218 DQLNGALAAI 227


>gi|242309542|ref|ZP_04808697.1| amino acid-binding protein [Helicobacter pullorum MIT 98-5489]
 gi|239524113|gb|EEQ63979.1| amino acid-binding protein [Helicobacter pullorum MIT 98-5489]
          Length = 244

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 88/247 (35%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M K+    +L ++++                ++G  +  G N     F   +   +  GF
Sbjct: 1   MIKNMMKFLLAILVVALVFGCQKN-------EKGSKVYVGTNAEFAPFEYREGK-NIVGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + ++        +I+++ +       AL+S +ID++      T  R+  +  +  
Sbjct: 53  DIDLIKEIAR---ISGFEIEFVDMQFDGLLPALESGKIDLIISGMTATEDRKKFVDFS-S 108

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P         +   ++ I S   L G  + V  G T ++ ++              F   
Sbjct: 109 PYYSTKQAILVYQDEQKIQSFDDLVGRKVGVVLGFTGDILVSKI-----PNIQSQKFNAA 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E+  A ++ + +A   D       K    + SE  ++    +    A A+ +G+ E   
Sbjct: 164 SEVILALKSKKIEAVVMD---YETAKNYAKQNSELKLVQTDFASEEYAIAMRKGNEELLG 220

Query: 240 IVSWTHY 246
            ++    
Sbjct: 221 KINQAIK 227


>gi|296119960|ref|ZP_06838514.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306]
 gi|295967114|gb|EFG80385.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306]
          Length = 288

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 86/258 (33%), Gaps = 16/258 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + IL L +   ++ S    +L  I + G +  G+     G    + +G + G +V+    
Sbjct: 13  MVILGLSLSACSTSSGEQGLLDTI-ESGNITIGVKFDQPGIGLREGDGSFTGAEVEIANH 71

Query: 67  ----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +++     P  I+Y    A +R   L++ ++ ++      T   +    + F    
Sbjct: 72  VVETIAAENGWTPPNIEYRETPAAQRETLLRNGEVSLIQGGYSITP--DRMEEVDFAGPV 129

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               Q  ++      I S+  L G  +C  AG+     + +   A         ++    
Sbjct: 130 LLTHQALLVRSDDSAIESLDDLDGKILCSSAGSKPAQRIKEEIPA----VQLQEYDTTSS 185

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAPAIIQGDTEW 237
              A      DA T D   L       D   E + +        S       + +GDT  
Sbjct: 186 CIEALSQGNVDAMTSDAPILAGFAGQYDGEFEVLDMTKSDGSHFSNEWYGIGLQKGDTAG 245

Query: 238 YNIVSWTHYAMVTAEELG 255
              V+     M  + +L 
Sbjct: 246 VEAVNNVLTEMQDSGQLD 263


>gi|241762906|ref|ZP_04760969.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241368081|gb|EER62286.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 278

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 83/243 (34%), Gaps = 11/243 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66
           + L L+       +   + L  IK+RG L  G+      F  +        G++V     
Sbjct: 12  AGLGLLCAITAPAAHADATLDKIKQRGKLVVGVILSGPPFGTIDPATQRHVGYNVLLAEG 71

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +      ++ + +    R   LQ  ++DIL  N  WT  R   L     P     G
Sbjct: 72  VAKGLG---VTVETVQVQPSNRVQFLQQGKVDILVANMQWTQERSEILSFVPTPFEEVGG 128

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K  GI +   L G  +CV  G+     LAD   AH        F    E   A 
Sbjct: 129 AAIA-KKGTGIKAWDDLRGEPVCVSQGSNFTKPLADQHGAH-----IKAFRGQPESLLAL 182

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           R   C A       L  L + N    ++ I+ P  +  SP    + +G+ +    +    
Sbjct: 183 RGGNCTAAVHVSPTLRELVVENPDWKDYEIVSPSDLIPSPSVIWLRKGENDTQAAIDRVV 242

Query: 246 YAM 248
              
Sbjct: 243 QDW 245


>gi|297571712|ref|YP_003697486.1| amino acid ABC transporter periplasmic protein [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296932059|gb|ADH92867.1| extracellular solute-binding protein family 3 [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 270

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 83/249 (33%), Gaps = 16/249 (6%)

Query: 2   YKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   ++I  L++   ++ +      +L   K    +  G       ++    +G+  G 
Sbjct: 5   KRISAIAIATLMLAACSTTTATPAGKLLETTKATKTIAVGTEGTYRPYSYTDESGNLAGI 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  + L+  +  D   +++           + + +  ++  N   +  R+      F 
Sbjct: 65  EVDIMKLLAKDLGAD---VKFTVAPWDGLIAGVDAGKYPVVINNLAVSDERKE--KYDFT 119

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                D   F +     ++S+  L+      Q+ T+    LA        K   +  E  
Sbjct: 120 VPYTRDVAKFAVRADSPLTSIDDLTTQK-AAQSTTSNLGMLA----KETYKLDIVPVEGF 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEW 237
            +      A R D  T   S +       + P   + L D   ++P   +  + +G+  +
Sbjct: 175 VQAIDLVSAGRAD--TTLNSLVTFKLYAENNPKSAIRLLDGEVETPGCCSILVKKGEDAF 232

Query: 238 YNIVSWTHY 246
              ++    
Sbjct: 233 LKELNAAIT 241


>gi|167549641|ref|ZP_02343400.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205325236|gb|EDZ13075.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 91/245 (37%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L+G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLNGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|157146483|ref|YP_001453803.1| hypothetical protein CKO_02243 [Citrobacter koseri ATCC BAA-895]
 gi|157083688|gb|ABV13366.1| hypothetical protein CKO_02243 [Citrobacter koseri ATCC BAA-895]
          Length = 243

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 12/216 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++     F  + A+    GFD+D   AL   +  D     +          AL+ 
Sbjct: 22  KINFGVSATYPPFESLDASNKIVGFDIDLATALCKQMQAD---CTFTNHAFDSLIPALKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R  S  + F    Y +    I  K     + + L G  I ++ GT
Sbjct: 79  KKYDAVISGMDITPER--SKQVTFTSPYYANSALVIAKKDSY-KTFADLKGKRIGMENGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L D           + ++  +      +  R D   GD + +     TN +   +
Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGAA 191

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +       + L  A+   +      ++    A+
Sbjct: 192 TEKVTDPQYFGTGLGIAVRPDNKALLEKLNTALAAI 227


>gi|328552022|gb|AEB22514.1| YckK [Bacillus amyloliquefaciens TA208]
 gi|328910285|gb|AEB61881.1| polar amino acid transport system substrate-binding protein
           [Bacillus amyloliquefaciens LL3]
          Length = 265

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 74/260 (28%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K      + + I    +          S +  +   +KK+G L  G       F    
Sbjct: 1   MKKALLALFMMVSIAVLAACGNSQDSGSKSKDGDLWASVKKKGVLTVGTEGTYEPFTFHD 60

Query: 52  AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
                  G+DV+  + ++  +        +        F  L +K+ D+++     T   
Sbjct: 61  KKTDKLTGYDVEVIQEVAKRLGLKAD---FKETQWDSMFAGLNAKRFDVVANQVGKTG-- 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                  F           +  K   I+  + + G +   Q+ T+    LA    A    
Sbjct: 116 -RENQYDFSDKYTTSNAVVVTKKDSTIAKEADVKGKT-AAQSLTSNYNKLAKEAGAK--- 170

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 E + +     +  R D    D  A+     T+   +  +       +     A 
Sbjct: 171 --IEGVEGMAQSLQLIQQGRADLTYNDKLAVLNYLKTSGNKNVKIAFEAGQPQQTY-FAF 227

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            +G  E    V+     M  
Sbjct: 228 RKGSGELVTHVNKALKEMKE 247


>gi|295098052|emb|CBK87142.1| L-arginine-binding protein/L-lysine-binding
           protein/L-ornithine-binding protein [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L        ++ G +     F+   A GD+ GFD
Sbjct: 1   MKKTVLALSL---LVGLSAAASSYAALPQ-----TVRIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---EVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSE 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E      ++   +    + ++  
Sbjct: 108 KLYAADSRLIAAKGSPIQPTIDSLKGKHVGVLQGSTQEGYANANWREKGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E+      +             + + D
Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           TE                EL       ++++K   + +V
Sbjct: 226 TELKAAFDKAFN------ELRKDGT-YDKLAKKYFDFNV 257


>gi|134292338|ref|YP_001116074.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia vietnamiensis G4]
 gi|134135495|gb|ABO56609.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 260

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 87/255 (34%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ +  A      K    ++ G++     F    A+G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGTAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   I    +K  ++  +      AL++++ D +  +   T  RE  +   F  
Sbjct: 53  VDLGNEICRRI---AAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPAREEQIA--FSA 107

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K    + +   L G +I V+ GT  E     Y+         + ++  
Sbjct: 108 KLFNTPTRLVTKKGAGLLPTAESLKGKTIGVEQGTIQETYAKTYWAPKG--VTVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233
           +++ A   + R +    D        L   R +            P          + + 
Sbjct: 166 DQVYADLISGRLNGALQDAVQAEIGFLKTPRGAGFDFAGK-DLDDPKTLGNGAGIGLRKE 224

Query: 234 DTEWYNIVSWTHYAM 248
           DT+    +     AM
Sbjct: 225 DTDLKTKIDGAIAAM 239


>gi|238028316|ref|YP_002912547.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia glumae BGR1]
 gi|237877510|gb|ACR29843.1| Cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia glumae BGR1]
          Length = 258

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 83/224 (37%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F  V  NGD  GFDVD  + + + I     +  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESVAQNGDIVGFDVDLAKEICTRI---AVRCTWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++++ D++  +   T  R     + F    Y      I       + +++ L G  + 
Sbjct: 77  ALKARKFDVIMSSLTVTDKR--REQIDFSDKLYDAPARMIAPAGSPLLPTLASLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        + ++  +++ A     R DA   D        L   
Sbjct: 135 VEQGSTQETYAKTYWEPRG--VTIVPYQNQDQVYADLGTGRLDAALQDELQADYGFLRTP 192

Query: 210 RPSEH-VILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248
           R        P++     +       + + DT+    ++    AM
Sbjct: 193 RGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAM 236


>gi|254226190|ref|ZP_04919785.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae V51]
 gi|125621292|gb|EAZ49631.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae V51]
          Length = 243

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADPAALKGNRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALLDQLNAALEAVKENGEYA 234


>gi|78060926|ref|YP_370834.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77968811|gb|ABB10190.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 267

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 84/254 (33%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + S          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLLVTALAFAPLVSFAQDTST---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + +   L+G  I +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPAGSKLLPTAESLAGKRIGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++   +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
                 ++    A+
Sbjct: 225 EAMKKRLNDAIVAI 238


>gi|90410448|ref|ZP_01218464.1| putative ABC-type amino acid transport/signal transduction system
           [Photobacterium profundum 3TCK]
 gi|90328689|gb|EAS44973.1| putative ABC-type amino acid transport/signal transduction system
           [Photobacterium profundum 3TCK]
          Length = 243

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 98/316 (31%), Gaps = 73/316 (23%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L        S NA+   +IK        +      F  V  N   +GFD
Sbjct: 1   MKKILLASLIGLA-------SANAAAQEEIK------FAMEATYAPFEYVDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R+    ++F  
Sbjct: 48  VDLANALCKEM---DAKCSFHNQAFDSLIPALKFKRYDAAISGIDITEARQK--QVSFTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+   +  +++ + LSG  + VQ G+T +  L D           + +   +
Sbjct: 103 PYYDNSAAFV-AIEGKVANQAALSGKRVGVQNGSTHQSYLIDQMA----GVTTVPYASYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +     +  R D+  GD + +          +   +   + ++             +   
Sbjct: 158 DAFIDMQNGRIDSVFGDTAVVAEWF--KKNDTLTYVGDQVTNQEYFG-------NGFGIA 208

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+          E  + Q N                                     + +
Sbjct: 209 VNKK-------NEELVNQLNA----------------------------------ALKTV 227

Query: 301 RHMGNYGEMFDRNLGN 316
           +  G Y E+FD+  G 
Sbjct: 228 KANGQYQEIFDKYFGK 243


>gi|254249604|ref|ZP_04942924.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124876105|gb|EAY66095.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 267

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 87/254 (34%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + S          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLLVTALAFAPLASFAQDTST---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + S + L+G  I +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPVGSKLLPSAASLAGKRIGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++ + +     A  I +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIVAI 238


>gi|167034163|ref|YP_001669394.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166860651|gb|ABY99058.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 279

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 87/239 (36%), Gaps = 11/239 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60
            +    S+L    +  +  +   + L  +++R  L  G+      F  +     +  GF 
Sbjct: 8   RRGLLASLLATTTVAASGLAQADATLDKVQQRHKLAVGVVLSGGPFGAIDPATREPIGFS 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R L+  +      +  + +    R   LQ  ++D+L  N +WT  R+  LG    P
Sbjct: 68  VDLARDLARQLG---VAVDLVAVQPANRVQFLQQGKVDLLIANMEWTPERDKLLGHVPTP 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                G   +  K   I++ + L G  +C   G++    L +      +      F+   
Sbjct: 125 FYRVGGTAAL-AKDSPINTWAGLKGQPVCTSQGSSYTQALVE------LGADIKAFKTSA 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E   A R + C A   D + +  L       S +  L   ++ +P       G+T+   
Sbjct: 178 ESLLALRGNNCVAAVHDATLINPLLAKGGEWSGYRALAPELNPAPSVIWTRLGETDTQQ 236


>gi|26990304|ref|NP_745729.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
 gi|24985257|gb|AAN69193.1|AE016553_8 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
          Length = 250

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V A+    GFDVD   AL   +  +      +  + +    AL +
Sbjct: 23  TLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153
           ++ D +  +   T  R     +AF    Y       + K   I S      G ++  Q+ 
Sbjct: 80  RKYDAIVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T  +   D +          ++  ++E +A   A R D    D   L+     N     
Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGDCC 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++     +K+  A A+ + D      ++    
Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228


>gi|218548236|ref|YP_002382027.1| histidine/lysine/arginine/ornithine ABC transporter
           periplasmic-binding protein [Escherichia fergusonii ATCC
           35469]
 gi|331658392|ref|ZP_08359354.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA206]
 gi|218355777|emb|CAQ88390.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|315298158|gb|EFU57422.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 16-3]
 gi|331056640|gb|EGI28649.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA206]
          Length = 260

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
            F +  +  A+I  +I      + G +     F    + G+  GFD+D  + L   I   
Sbjct: 13  AFSSVTAAFAAIPQNI------RIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI--- 63

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            ++  ++         +L++K+ID +  +   T  R     +AF    Y      ++ K 
Sbjct: 64  NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKN 121

Query: 135 KGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             I  +V  L G  + V  GTT E    +++    +    + ++  + I +   A R DA
Sbjct: 122 SDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDA 179

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
              D  A     L      ++      +    L        + + D E    ++   +A 
Sbjct: 180 AFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAE 238

Query: 249 VTAEELGITQKNINQVSKDTTNPDV 273
           + A+          +++K   + DV
Sbjct: 239 MRAD------GTYEKLAKKYFDFDV 257


>gi|242279195|ref|YP_002991324.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242122089|gb|ACS79785.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 247

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +L ++                   +  +    +        V  +    GF 
Sbjct: 1   MKRIIVALLLTILAATPALAG-----------KKVINIASDCTWPPMEFVNKDKQIVGFS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A + A   +   +    +     F  L + + D +  +      R+  +   F  
Sbjct: 50  VDLMKACAKAAGYE---VTIKNVAWDGIFAGLAAGKYDAICSSVSINEKRKKVM--DFAE 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  +  K     +++   G ++  Q GTT    +            P  ++ + 
Sbjct: 105 PYFEVQQSVVTAKDSTAKTLADFKGMNVGAQIGTTGYFAI-----KGAEGVVPKSYDEIG 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLT---NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R  A   D        L      +  +   +        L  A+ +G+TE 
Sbjct: 160 LAMEDLYNGRLAAVVCDDPIAADFALQQEEYSKKLKIAFIVKSDKAEYLGVAVKKGNTEV 219

Query: 238 YNIVSWTHYAM 248
            ++++    A+
Sbjct: 220 LDLINKGLAAV 230


>gi|145221824|ref|YP_001132502.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145214310|gb|ABP43714.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 503

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 70/218 (32%), Gaps = 15/218 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
           T+  ++      +K  G L+ G       F+      G   G+DVD  RA+   +  +  
Sbjct: 36  TACGSSGPG-NSVKDSGVLRVGTEGVYAPFSFHDPATGQLTGYDVDVARAVGEKLGVN-- 92

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++++       F AL++ + D+++     T  R                   +      
Sbjct: 93  -VEFVETPWDSIFAALEANRFDVVANQVTITPER--QQKYDLSEPYSIGEGVIVTRADDD 149

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+S+  L G     Q+ T+    +A    A          E + +  A     R D   
Sbjct: 150 SITSLDDLRGRR-AAQSTTSNWAQVARDAGA-----QIESVEGLTQAMALLSQGRVDVVV 203

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            D  ++YA        +   I      KS    A  + 
Sbjct: 204 NDSLSIYAYLAETGD-TAVKIAGTTGEKSEQGFAARKN 240


>gi|325125095|gb|ADY84425.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 270

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 26/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49
           M K     +  L +    +     S              ++  +G L  G+      ++ 
Sbjct: 1   MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G   GF+VD  +A++  +       +++P         L S + D++  N   T  
Sbjct: 61  R-KSGKLTGFEVDLGKAVAKKLGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+      F     +     I  K   ++ +SQ+ G       GT     +         
Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227
           K   +         +  R  R D       A YA    ++   +  +        P  ++
Sbjct: 169 KGTIVPSGEFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227

Query: 228 PAIIQGDTEWYNIVSWTH 245
               + +T+     +   
Sbjct: 228 ALFNKKNTKLLAKFNKAL 245


>gi|240127767|ref|ZP_04740428.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae SK-93-1035]
          Length = 274

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S++ + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|225163801|ref|ZP_03726099.1| extracellular solute-binding protein [Opitutaceae bacterium TAV2]
 gi|224801594|gb|EEG19892.1| extracellular solute-binding protein [Opitutaceae bacterium TAV2]
          Length = 265

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 9/230 (3%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            D K    L  G N     F  V+       GFDVD    ++ A     + ++       
Sbjct: 26  QDAKSSKILTVGTNPEFPPFELVEKGTNKIIGFDVDLITEVAKAAG--YAGVKMEAFAFD 83

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSG 145
               AL  K++D++      T  R+    + F    Y   Q   +  K K IS++  +  
Sbjct: 84  TLGEALNQKKVDVVIAGMTITDERKA--KVLFTDPYYNAAQVLVVTKKNKTISTLDDIKD 141

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + VQ GTT  +        +N       F +  E+    +  R D    D+       
Sbjct: 142 KRVGVQLGTTGGVVAEKALGQNNPNMK--QFRKYTEVFYELKLGRVDVVVVDMPV-AQAY 198

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L     S+  I    +S+     AI + +TE +  ++    ++  + +L 
Sbjct: 199 LKLKNFSDLKISSKPMSEEEFGIAIAKDNTELHKQLNAGLKSVRESGKLD 248


>gi|221211585|ref|ZP_03584564.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans CGD1]
 gi|221168946|gb|EEE01414.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia multivorans CGD1]
          Length = 353

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I        ++  +      
Sbjct: 115 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 171

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++K+ DI+  +   T  R     + F    Y      I      +  +V+ L G  + 
Sbjct: 172 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 229

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 230 VEQGSTQETYAKTYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 287

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 288 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKIRINKAL 328


>gi|291522806|emb|CBK81099.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 265

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 10/241 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V +  LII        +  +    +     +  G +     F+ + ANG+  G 
Sbjct: 1   MKKLSIVIVFGLIISILCGCGADKENKQESLGDLPTVTVGYD-NYSPFSFMDANGNMTGI 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  R   S +   P    ++ +N +++   L    ID +  +   T   +      + 
Sbjct: 60  DVELAREAFSRMGYAPE---FVFINWEDKKNLLVKGSIDCIWSSFTMT---DREDEYHWA 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                  Q   +++   I ++  L G  + VQ+ T  E  +  +          I  ++ 
Sbjct: 114 GPYMRSHQVVAVNEDSDIQTLEDLEGKVMAVQSTTKPEDIIRSHDGTLPELRKVISVQKR 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + I         DA     ++    +   D   +  IL + +    L  A  + DT   N
Sbjct: 174 DLIFILLSKGYVDALAAHDTS--VDQFMEDSGLKFRILEEPLQTVDLGVAFDKADTRGLN 231

Query: 240 I 240
           I
Sbjct: 232 I 232


>gi|218705839|ref|YP_002413358.1| histidine/lysine/arginine/ornithine ABC transporter
           periplasmic-binding protein [Escherichia coli UMN026]
 gi|293405775|ref|ZP_06649767.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|293410666|ref|ZP_06654242.1| histidine ABC transporter [Escherichia coli B354]
 gi|298381458|ref|ZP_06991057.1| histidine ABC transporter [Escherichia coli FVEC1302]
 gi|300896991|ref|ZP_07115470.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 198-1]
 gi|331663825|ref|ZP_08364735.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA143]
 gi|218432936|emb|CAR13830.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli UMN026]
 gi|291427983|gb|EFF01010.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|291471134|gb|EFF13618.1| histidine ABC transporter [Escherichia coli B354]
 gi|298278900|gb|EFI20414.1| histidine ABC transporter [Escherichia coli FVEC1302]
 gi|300359172|gb|EFJ75042.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 198-1]
 gi|331059624|gb|EGI31601.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA143]
          Length = 260

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
            F ++    A+I  +I      + G +     F    + G+  GFD+D  + L   I   
Sbjct: 13  AFSSATVAFAAIPQNI------RIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI--- 63

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            ++  ++         +L++K+ID +  +   T  R     +AF    Y      ++ K 
Sbjct: 64  NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKN 121

Query: 135 KGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             I  +V  L G  + V  GTT E    +++    +    + ++  + I +   A R DA
Sbjct: 122 SDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDA 179

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
              D  A     L      ++      +    L        + + D E    ++   +A 
Sbjct: 180 AFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAE 238

Query: 249 VTAEELGITQKNINQVSKDTTNPDV 273
           + A+          +++K   + DV
Sbjct: 239 MRAD------GTYEKLAKKYFDFDV 257


>gi|168184266|ref|ZP_02618930.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Bf]
 gi|237794765|ref|YP_002862317.1| polar amino acid uptake ABC transporter amino acid-binding protein
           [Clostridium botulinum Ba4 str. 657]
 gi|182672666|gb|EDT84627.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Bf]
 gi|229263262|gb|ACQ54295.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Ba4 str.
           657]
          Length = 268

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50
           M K   +S+L    C+I           S          IK +G L  G+      F   
Sbjct: 1   MSKKKILSVLFIVVCIISFTLVGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G+ +GFDVD  + L   +     K++      +     +     D+L         
Sbjct: 61  NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
            E ++  +       D    +      I +   L    + VQ  T++E  +       + 
Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNSIYNKDDLKEKVVGVQTSTSSEQVV----DKLDG 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 + R  E     + +R DA      A  A  + + +     I+   +  S +   
Sbjct: 173 IKEIKRYNRNPEALIDLKNNRIDAVVVG-YAYAATAMKDKKDDNLKIINSPVGSSDIVMV 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
             +G  +    ++     +  + +  
Sbjct: 232 TKKGSDDLTKELNKALKKVKESGKYE 257


>gi|119946083|ref|YP_943763.1| glutamine ABC transporter extracellular solute-binding family 3
           protein [Psychromonas ingrahamii 37]
 gi|119864687|gb|ABM04164.1| ABC glutamine transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 263

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 9/210 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       ++   ++L FT  S  A+ L  IKK G L+  +      F  V  +   +G+
Sbjct: 1   MKLCKVLGNVFTSLLLVFTIHSAQANQLESIKKAGVLRVAVPQDFPPFGSVGTDFKPQGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +  +   ++ + + +  R   LQ++++D++  +      RE    + F 
Sbjct: 61  DIDMAAYLADELNVE---LELVAVTSANRIPYLQTRKVDLVISSLGKNPEREAV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G      + +SS + L   ++ V  G+  +L L     +         +E  
Sbjct: 116 SAYAPFFLGVFGTDNEMVSSPADLKNKTVGVTRGSVEDLELTKLVSS---TTTLQRYEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND 209
               +A+ + +          +  +     
Sbjct: 173 NATLSAFLSSQVSLIATGNLVIAEIATRFP 202


>gi|91786949|ref|YP_547901.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91696174|gb|ABE43003.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 286

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 7/211 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G +     F      G+  GFD+D  +A++     +   ++++    +  F +L  
Sbjct: 51  VYVVGTDAAYAPFESQNEKGEIVGFDIDVVKAVAQKAGIE---VKFINTPWEGIFNSLNQ 107

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D+L      T  R     + F    +   Q   + K   I+  S L    + VQ GT
Sbjct: 108 GDRDLLVSAITITPER--KQTMDFSSPYFDAQQLIAVKKDSKIADFSHLKKLKVAVQNGT 165

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  +           +   FE          A   DA   D   +      N      
Sbjct: 166 TGDEVVTKLQGKA--SPNIKRFESTLLALKELEAGGVDAVVADNGVVVHYVNNNVGAKFK 223

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            I     +      A+ +G+TE    ++   
Sbjct: 224 TISDASFAAEQYGLAVKKGNTELLEKLNKGL 254


>gi|327394434|dbj|BAK11856.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           ArgT [Pantoea ananatis AJ13355]
          Length = 265

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 21/234 (8%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +F   A     I++   ++  ++     F      G   GFD+D   AL + +    +
Sbjct: 21  GCAFGAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCAQM---QA 70

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K  ++         AL++++ D +  +   T  R     + F    Y      I  K   
Sbjct: 71  KCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTQPLYDTHAQLIARKGSA 128

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + +   L G ++ V+ GT  E      ++ H      + +    ++++   A R DA  
Sbjct: 129 LLPTPESLKGKTVGVEQGTVQERYARAKWQPHG--VTVVPYGDQAQVESDLVAGRLDAVF 186

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
            D +      L   +  +   L   I + P+     A  + +GD E    +   
Sbjct: 187 TDAAQAANGFLKQPQGKDF-ALAGPIVQDPIIGPGTAIGLRKGDAELKTALDTA 239


>gi|308065945|ref|NP_463215.2| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
          Length = 239

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +      +L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           R +   GD   + A+        ++ I+ +  S           A+ + +      ++  
Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKDNDALLQEINAA 219

Query: 245 HYAMVTAEELG 255
              +  + E  
Sbjct: 220 LDKVKASPEYA 230


>gi|323496725|ref|ZP_08101770.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           sinaloensis DSM 21326]
 gi|323318150|gb|EGA71116.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           sinaloensis DSM 21326]
          Length = 260

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 81/254 (31%), Gaps = 25/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I C   L  TS   N            ++   +     F  + A+G   GFD
Sbjct: 1   MKK-LLTIIACASTLISTSALANKP----------VRLASDFTYPPFNYMDADGKPAGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL            ++  +      +L +++ D++  +   T  R+    + F  
Sbjct: 50  IEIADALCKEA---KLTCTWVSQSWDSLIPSLMARKSDVIMASMRITEERK--QRVLFTD 104

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+  K + +  S   L G  I VQ GT  +  + D F           +   
Sbjct: 105 KYYQTPARFVAAKSEPVSISKQGLKGKVIGVQTGTIHDRYVTDMF---GDVAEIKRYNGQ 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E+    +  R D   G+   L    L  +       +   ++         A A+ + D
Sbjct: 162 DEVYIDMQNGRLDVTFGNSDQLSLAFLDKEIGKGFEFVGQAVTDKAYIGEGTALAMRKND 221

Query: 235 TEWYNIVSWTHYAM 248
                  +    A+
Sbjct: 222 EALAGKFNQAIKAI 235


>gi|315446439|ref|YP_004079318.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|315264742|gb|ADU01484.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 487

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 70/218 (32%), Gaps = 15/218 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
           T+  ++      +K  G L+ G       F+      G   G+DVD  RA+   +  +  
Sbjct: 20  TACGSSGPG-NSVKDSGVLRVGTEGVYAPFSFHDPATGQLTGYDVDVARAVGEKLGVN-- 76

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++++       F AL++ + D+++     T  R                   +      
Sbjct: 77  -VEFVETPWDSIFAALEANRFDVVANQVTITPER--QQKYDLSEPYSIGEGVIVTRADDD 133

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+S+  L G     Q+ T+    +A    A          E + +  A     R D   
Sbjct: 134 SITSLDDLRGRR-AAQSTTSNWAQVARDAGA-----QIESVEGLTQAMALLSQGRVDVVV 187

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            D  ++YA        +   I      KS    A  + 
Sbjct: 188 NDSLSIYAYLAETGD-TAVKIAGTTGEKSEQGFAARKN 224


>gi|296161318|ref|ZP_06844126.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. Ch1-1]
 gi|295888476|gb|EFG68286.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. Ch1-1]
          Length = 260

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    ++G   GFD+D    + + +    +K  ++  +      
Sbjct: 23  KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI   +  L G ++ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTADSLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEPKG--AKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   +    +        + + DT+    V      ++
Sbjct: 196 RGAGFDFVGKDLEDPKILGNGAGIGMRKEDTDLKTKVDKAIAEII 240


>gi|295096443|emb|CBK85533.1| L-arginine-binding protein [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 243

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 69/218 (31%), Gaps = 16/218 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++     F  + A+    GFD+D  +AL   +  D     +          +L+ 
Sbjct: 22  KINFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R   +   F    Y +    I  K     S  +L G  I ++ GT
Sbjct: 79  KKYDAVISGMDITPERSKQVA--FTDPYYANSAVVIAKKG-AYKSFDELKGKRIGMENGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L D           + ++  +      +  R D   GD + +         P   
Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLG 189

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248
                +         L  A+   +      ++    A+
Sbjct: 190 TATEKVTDPQYFGTGLGIAVRPDNKALLEKLNGALKAI 227


>gi|258620248|ref|ZP_05715287.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio mimicus VM573]
 gi|258587606|gb|EEW12316.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio mimicus VM573]
          Length = 243

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     ++F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      I+  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KIADQAALKGKRVGVQNGSTHQSFLLEQLP----NVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALVDQLNAALEAVKENGEYA 234


>gi|317491046|ref|ZP_07949482.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920593|gb|EFV41916.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 256

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 76/246 (30%), Gaps = 16/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++      +                       G       F    +    +GFD
Sbjct: 1   MLKKMILAGCFAAAMVSGMTMAAQQTY---------VVGSGGTYRPFEFENSQKQLEGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   D   I+ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 52  IDIIKAIAKAENFD---IKLVNTPWEGIFATLSSGDRDIIISGITITDKRQKM--VDFST 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++     + SV+ L G  + V   +T ++ ++D    +        F+   
Sbjct: 107 PYFPAEQSIVVPSGSKVDSVNALKGQKVGVVNSSTGDIVVSDVLGKN--STDIKRFDNTP 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+  +      +   +  ++      +     A+ +G+ E    
Sbjct: 165 LMLQELYEDGLGAAVGDVGVVKYYIKNHPEKAFKLVPDSKFERQYFGIAVAKGNQELLGK 224

Query: 241 VSWTHY 246
           ++    
Sbjct: 225 INAGLQ 230


>gi|225405627|ref|ZP_03760816.1| hypothetical protein CLOSTASPAR_04848 [Clostridium asparagiforme
           DSM 15981]
 gi|225042847|gb|EEG53093.1| hypothetical protein CLOSTASPAR_04848 [Clostridium asparagiforme
           DSM 15981]
          Length = 287

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 12/237 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +  A         G L    N     +      G+  G D D  RA++  +     ++
Sbjct: 53  TTAEAAGEEETKAAGGKLIMVTNAEFPPYEYH-EGGEIVGIDADIARAIADELG---MEL 108

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +   +        L S + D           R+    + F        Q  I+     I+
Sbjct: 109 EIEDIAFDSIIPELTSGKADFAMAGMTVDEKRK--QSVDFSDTYAKASQRIIVKSDSAIA 166

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +   L G  + VQ GTT +L ++D    +        + +  E   A    + DA   D 
Sbjct: 167 TPDDLKGKVVGVQQGTTGDLYVSDLEADN---TTVERYNKGFEAVQALSQGKIDAVVIDG 223

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                     D      IL +  +    A A+ +G+TE  + ++ T   +  + +L 
Sbjct: 224 EPAKVFVEQTDG---LKILDEAFTDEEYAVAVKKGNTELLDKINSTLKNLKESGKLD 277


>gi|221209255|ref|ZP_03582241.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221170873|gb|EEE03334.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 83/243 (34%), Gaps = 21/243 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ + + +L  ++    A      K    ++ G +     F     +G   GFD
Sbjct: 1   MKR--LIAAVSIALLAASAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + + +    +K  +L  N      AL++K+ D +  +   T  R   +G  F  
Sbjct: 53  IDLGNEICARL---KAKCVWLENNFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      ++ K    + +   L G SI V+ GT  E     Y+         + ++  
Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +++ A   A R D    D        L   R +        +             + + D
Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGASFDFAGKDLDDPKTLGEGAGIGLRKED 225

Query: 235 TEW 237
           T+ 
Sbjct: 226 TDL 228


>gi|206560948|ref|YP_002231713.1| periplasmic histidine-binding protein [Burkholderia cenocepacia
           J2315]
 gi|198036990|emb|CAR52911.1| periplasmic histidine-binding protein [Burkholderia cenocepacia
           J2315]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I     K  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +V+ L G  + 
Sbjct: 77  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETFAKAYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINRAL 233


>gi|110800184|ref|YP_695034.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens ATCC 13124]
 gi|110674831|gb|ABG83818.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens ATCC 13124]
          Length = 278

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 30/290 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K+ F     V+++  + L              +   +  IK+ G L  G++     + 
Sbjct: 1   MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+D  + ++  +  D   ++   +       ++++  ID+      
Sbjct: 61  FHIIKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163
            T   +    + F  I Y   QG +++K     I  +  L G  +  Q G+     +   
Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                      + + V  +    +  + DA   ++    A   +       V    I + 
Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228

Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               A AI +G+ +  + V+ T   +  + ++     +  ++       +
Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKESGKIDQFTNDAIELVPYQKKEE 278


>gi|1805432|dbj|BAA08994.1| yckK [Bacillus subtilis]
          Length = 268

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      + + I    +              +  +   IKK+G L  G       F  
Sbjct: 1   MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              +     G+DV+    ++  +     K+ +        F  L SK+ D+++     T 
Sbjct: 61  HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWGSMFAGLNSKRFDVVANQVGKT- 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +      F           +  K    I S + + G +   Q+ T+    LA    A 
Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    E + +     +  R D    D  A+     T+   +  +       +S   
Sbjct: 174 -----VEGVEGMAQALQMIQQARVDMTYNDKLAVLNYLKTSGNKNVKIAFETGEPQSTY- 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               +G  E  + V+     M  
Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250


>gi|323441690|gb|EGA99335.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           O46]
          Length = 467

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 17/260 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T+ +        IK+RG L+ G++           V    ++ G D+D  + ++     +
Sbjct: 7   TAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---N 63

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++ + ++      AL++ +IDI+      T  R+    + F           ++ K 
Sbjct: 64  NLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QVDFSDSYMMTKNNMLVKKD 121

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                  +   +   +  Q GT  E       +            R+ ++  A ++ + +
Sbjct: 122 KVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVE 177

Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
               +     A    N +    +V   +    + +A  + +   +  + ++ T   +   
Sbjct: 178 GAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDK 235

Query: 252 EELGITQKNINQVSKDTTNP 271
             +     N      D +  
Sbjct: 236 GLIDKYMTNAANAMNDDSGF 255


>gi|323141554|ref|ZP_08076439.1| putative cyclohexadienyl dehydratase [Phascolarctobacterium sp. YIT
           12067]
 gi|322413966|gb|EFY04800.1| putative cyclohexadienyl dehydratase [Phascolarctobacterium sp. YIT
           12067]
          Length = 263

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 87/261 (33%), Gaps = 15/261 (5%)

Query: 2   YKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
            K    ++L   I    +   S  A  + D++ RG L  G        + +    G ++G
Sbjct: 5   KKLCVGALLATTICGMGALTPSAEAGKIEDVQARGILLVGSTGDYKPMSYLNKETGKYEG 64

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+    L+ ++      +QY+P   K       + + DI       T  RE    +  
Sbjct: 65  FDVEVAELLAQSLGVK---VQYVPTTWKTLQADTMAGKFDIAMCGVTRTFARE--QKMNM 119

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  G+  +  K       S+       V+       T   +  ++      +V  +
Sbjct: 120 SHGYLTFGKTILCRKADAKKFTSEADLNKNSVRVMVNPGGTNEKFALSNLPNCTLLVHPQ 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             EI A     + D    +        + +D      +L D  +K+     + +GD +W 
Sbjct: 180 NAEIPALIAEGKADVMITETME-ARRYVRDDARLAAPLLDDPFTKNHFGILMAKGDQDWL 238

Query: 239 NIVSWTHYAMVTAEELGITQK 259
           N V++        EE  +   
Sbjct: 239 NYVNFFM------EEKDMDGT 253


>gi|157371563|ref|YP_001479552.1| cationic amino acid ABC transporter periplasmic binding protein
           [Serratia proteamaculans 568]
 gi|157323327|gb|ABV42424.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Serratia proteamaculans 568]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 13/216 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G +     F    A G+  GFD+D  + L   I    +K  ++  +      +L++
Sbjct: 27  TLKIGTDPTYAPFESKNAKGELVGFDIDLAKELCKRI---NTKCTFVESDFDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      I  K   +      L G S+ V  G
Sbjct: 84  KKIDAIISSLSITEKR--QQEIAFTDKLYAANARLIAPKGSKLLPTVDALKGKSVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E      ++   +    + ++  + + A   + R DA   D  A     L      +
Sbjct: 142 TTQEAYANAMWQPKGI--TVVPYQNQDLVYADLASGRIDAAFQDEVAGSDGFLKQPPGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           +    + +             + + DTE    +   
Sbjct: 200 YAFAGESVKDDKFFGVGTGMGLRKTDTELKAALDKA 235


>gi|111023902|ref|YP_706874.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1]
 gi|110823432|gb|ABG98716.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1]
          Length = 295

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 80/243 (32%), Gaps = 9/243 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            +         + +  I + G L+ G      G +     G+ +G+++D  R ++  +  
Sbjct: 36  AVAQAPQFAPGTTMEKIAREGVLRVGTRFDHPGLSARNLRGEQEGYEIDLVRYIAGKLGV 95

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +I++   N+  R   LQ  ++D++         R     ++F           +  K
Sbjct: 96  PADRIEWTEANSASREQLLQQDKVDVVVATLSINDKR--RQVISFGGPYLDINNDLVTVK 153

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
               +           V   +T    ++   + +  + + I F+   +   A +    DA
Sbjct: 154 GNPKNITD--PQTPNGVTVCSTLGGAVSASLRKNFPQTNLIEFDVSSKCIDALKNGSVDA 211

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---YAMVT 250
                         + +  +  ++    +       I +GD  +   ++      Y+  +
Sbjct: 212 LATQGPIGAGYVSKDQK--DIELINKPFAVESWGVGIAKGDVAFCEFLNSAITDYYSDGS 269

Query: 251 AEE 253
           AEE
Sbjct: 270 AEE 272


>gi|301300302|ref|ZP_07206510.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852105|gb|EFK79781.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 485

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 30/281 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ I+  +       + N + +           G +     F     N  + G D
Sbjct: 1   MLKKAFIFIVSCLCTLLIFTNLNNNHVNA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+   P+       +LQS QID +      T  R+      F  
Sbjct: 59  IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + +   I+S+ QL G  + ++ GT            +  K   + F+  +
Sbjct: 114 PYYKTGFIMAVAENSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236
            I          A   D+  +     T  +     I+           A+++G  +    
Sbjct: 172 NIYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTKPAQSGYYGFAVMKGKNQELLH 228

Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263
                         +  IV+        AE+    + + N+
Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269


>gi|222102301|ref|YP_002546891.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Agrobacterium radiobacter K84]
 gi|221728418|gb|ACM31427.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Agrobacterium radiobacter K84]
          Length = 286

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 88/286 (30%), Gaps = 19/286 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M + F  S+L +      + S  A S L  IK+ G ++ G +     ++  + +G   G 
Sbjct: 1   MKRIFLASVLAIFSAGIVASSAAAESTLERIKRTGVVQIGFSNEK-PYSFKQPDGSLAGV 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D +  RA  + +      +  + +        L++   D ++         +    +AF 
Sbjct: 60  DYELARAAFAKLGVH--TVDGVAVKFSTLIPGLKAGHFDAIAAGLFI--RPDRCAEIAFA 115

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      + K     I S   +               +  D+ +    +   +VF+
Sbjct: 116 EPHIQIADAITVQKGNPKNIHSYDDVLKNPTIKIGTQQGSASRKDFERLGIPESQLVVFQ 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR---------PSEHVILPDIISKSPLAP 228
              E+  A ++ R D      +   A +              P    +     S + L  
Sbjct: 176 DFPEVFFALKSGRVD--LTTSTIFAANESIAADGGKSVERATPFILPVFDGKPSINYLGF 233

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              + D +     +    A  +  +        +    D  +PDV+
Sbjct: 234 GFRKDDQDLVAAFNDALRAFRSTPDYEAILAKYSVTPADVPSPDVK 279


>gi|78067200|ref|YP_369969.1| lysine/arginine/ornithine ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. 383]
 gi|77967945|gb|ABB09325.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G+  GFDVD  + +   I  +     ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVN---CVWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++K+ D++  +   T  R     + F    Y      I       + +++ L G  + 
Sbjct: 77  ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTIASLKGKRVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        I ++  +++ A   + R DA   D        L   
Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245
           R            K P       A  + + DT+    ++   
Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINKAL 233


>gi|168205901|ref|ZP_02631906.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens E str. JGS1987]
 gi|182624018|ref|ZP_02951806.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens D str. JGS1721]
 gi|170662631|gb|EDT15314.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens E str. JGS1987]
 gi|177910911|gb|EDT73265.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens D str. JGS1721]
          Length = 519

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 90/246 (36%), Gaps = 13/246 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F++I  L+++     + + +I  +   +  +    +     F  +   G+ KGF+VD   
Sbjct: 26  FLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELKGFEVDVWN 84

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +   +  D   +++   +    F  L+S +++ ++     T  RE      F     + 
Sbjct: 85  EIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYYFSEPYVYS 139

Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           G   I+ K    I S   L G  + V  G+  E  + D  K  N +   + ++  +    
Sbjct: 140 GAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTYQNTDAAFN 197

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVS 242
                R DA   D  +  A+    ++     +  + I K   A   ++ +   +    V+
Sbjct: 198 ELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKGKDLSENVN 255

Query: 243 WTHYAM 248
                M
Sbjct: 256 KALDEM 261


>gi|331701148|ref|YP_004398107.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128491|gb|AEB73044.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 715

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 16/238 (6%)

Query: 1   MYKDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +    +  +L          +   S      +    + G +     F        + G
Sbjct: 1   MKRKVLTAFGLLAAFATILFCLALPGSE----AQAKTYQIGTDVTYPPFEFANKENKYVG 56

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  ++++     +  K+   P+       ++QS Q+D +      T  R+      F
Sbjct: 57  IDIDIIKSIAKE---EGFKVNVKPVGFNAAVQSVQSGQLDGIIAGMTITPERK--DKFDF 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y  G    + K   I+S  QL G  + ++ GT          K +  K   + F+ 
Sbjct: 112 GTPYYKTGAVMAVKKGSDITSFKQLKGKKVALKTGTAAADYANSLKKKYGFKT--VTFDD 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            + +          A   D      L+       +  I     ++      + +G  +
Sbjct: 170 SDNMYQDVTTGNSVACFDDQPV---LQYGIKHGLKLQIASKPANQGWYGFGVKKGTHK 224



 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 24/257 (9%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +     F     N  + G D+D  RA+++       K++   L       A++
Sbjct: 262 KTFVIGTDVTFPPFEFANKNNKYVGIDMDLIRAIANE---QGFKVKIKALGFNAAVQAVE 318

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S Q D +      T  R+      F    +  G    + K   I  +S+L G  + V+ G
Sbjct: 319 SGQADGVIAGMSITNERKA--QFDFSKPYFNSGVVMAVAKNSKIHKLSELKGKRVAVKTG 376

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T+         K +  K   + F+    +          A   D   +   +    + ++
Sbjct: 377 TSGADYANSIKKKYGFK--VVTFDDSNNMYQDVSTGNSVACFEDHPVM---QYAIKQGTK 431

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             I+      +P   A+ +G  +          A++ A      Q   +  +  T +   
Sbjct: 432 LKIVTKPALNAPYGFAVKKGHNQ----------ALLQA----FNQGLADLKASGTDDSIK 477

Query: 274 QRFLGIDKSSNIGEALG 290
            ++LG D+     +  G
Sbjct: 478 AKYLGADEIKTAAKTSG 494


>gi|298717382|ref|YP_003730024.1| ABC transport system periplasmic solute-binding protein [Pantoea
           vagans C9-1]
 gi|298361571|gb|ADI78352.1| Putative ABC transport system, periplasmic solute-binding protein
           precursor [Pantoea vagans C9-1]
          Length = 256

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 86/250 (34%), Gaps = 22/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L  +  F                   L+ G++     F    A+G  +GFD
Sbjct: 1   MKKSVSLALLFSLTAFTQGALAQQ----------TLRFGVDPTFPPFESKAADGSLQGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ +       K Q++ +       ALQ+K+ D +      T  R     +AF  
Sbjct: 51  IDIGNAICAQA---KVKCQWVQMGFDSSIPALQAKKFDAILSAMSMTDKR--RQQVAFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      +      +++    L G +I V  GT  E      +++       + +   
Sbjct: 106 MLYNTPSALLAPAASKLTTDVASLRGKTIGVAQGTIQETYAKTKWESQG--VKIVSYPNQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDT 235
            E+     A R D    +  +     LT      +     ++  +I    +  A+ +GD 
Sbjct: 164 MEVYPDLVAGRLDGSLANAVSAEQGFLTTSEGKPYAIKGTLVDKVIFGDGVGIALRKGDE 223

Query: 236 EWYNIVSWTH 245
               +++   
Sbjct: 224 ANLKMINTAL 233


>gi|254504149|ref|ZP_05116300.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
 gi|222440220|gb|EEE46899.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
          Length = 280

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 5/180 (2%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            T A  L D+  RG L+CG+           AN +  GFDVD+C+ L++A+     +   
Sbjct: 32  PTQADTLDDVVDRGELRCGVVLDFPPIGYRDANNEPAGFDVDYCKDLAAAL---EVEATI 88

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+   ER   + + + D++   T  +L R  ++G  F           +++   GI S 
Sbjct: 89  YPVTWAERLPVIVTGRADVVFGATSDSLARARTVG--FTIPYAIYYAQGVVNADSGIESF 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  +    GT  E       +    ++    ++   E+  A    + D      +A
Sbjct: 147 EDIRGKRVAGAIGTVPEQEWLKIAEEWGEEHLYQGYQSENEVFLAVAQGKADIGITTNTA 206


>gi|92114910|ref|YP_574838.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91798000|gb|ABE60139.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 255

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 26/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L   +L  ++F+ +            L+ G++          A+G+  GFD
Sbjct: 1   MKKLLTMTLLGSALLAGSAFAQD-----------TLRIGVDVPYEPMEYRTADGELTGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL + I    ++ +++          L +++ D +  +      R+    + F  
Sbjct: 50  IELGNALCAEIG---AQCEWVVQAWDGIIPGLMARKYDAIMSSMTINEERK--QTVLFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +     +       I       L G +I VQ GT  +    D F           +  
Sbjct: 105 PYFTPPSAWFTPSDSEIDFPAKQTLEGKTIGVQRGTLQDNYATDMF---GDVADISRYTT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPAIIQG 233
            +++     A R D    D     +  L +D  S     E +  P          A  + 
Sbjct: 162 ADDLVLDMDAGRVDIAFLDFPVGKSTLLDSDEGSYKVVGEMITEPKKYFGDGFGIAFRKR 221

Query: 234 DTEWYNIVSWTH 245
           D E  +  +   
Sbjct: 222 DQELADKFNEAL 233


>gi|239787353|emb|CAX83830.1| Extracellular solute-binding protein family 3 [uncultured
           bacterium]
          Length = 248

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 87/259 (33%), Gaps = 23/259 (8%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K     +   +  ++     +   N       K    ++ GI +    F       + 
Sbjct: 1   MIKISKPSYLKCVFGILGALLVTGCQNTQ-----KDPNTIQVGICSDYPPFESRNDQNEL 55

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DVD  R +   +      + ++ ++      ++QS +ID++  +   T  RE    +
Sbjct: 56  VGYDVDLARIIGKELGKK---VNFVDMSFNALLSSVQSGKIDMVISSVGITEEREK--QV 110

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +F+    +  K+  +   + L G  I VQ G++       ++       +    
Sbjct: 111 DFSDPYFFNRLTVVSRKEMPLLDENALKGKKIGVQLGSSF-----AHWAKIRNLKNVATM 165

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   ++  A +  + +    D +        N     H     +         +++  + 
Sbjct: 166 DLNPQLIEALKTRQIEGVIIDYTQAAIFCKKNANLVYHF----LTHDEKGTAVVLKKGST 221

Query: 237 WYNIVSWTHYAMVTAEELG 255
              +++     + ++ +L 
Sbjct: 222 LRTLINQILQRLKSSGQLK 240


>gi|197302608|ref|ZP_03167663.1| hypothetical protein RUMLAC_01337 [Ruminococcus lactaris ATCC
           29176]
 gi|197298506|gb|EDY33051.1| hypothetical protein RUMLAC_01337 [Ruminococcus lactaris ATCC
           29176]
          Length = 273

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 90/285 (31%), Gaps = 35/285 (12%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46
           M K      LC  +   +     S N+             L  +K +G L  GI T    
Sbjct: 2   MKKKVLSVFLCAGLAVSMLAGCGSGNSDTKDKKDAAADSDLEYVKDKGTLVVGI-TDFEP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                 NG+W GFD D   A +  +  D   ++++ ++   + L L  K ID +      
Sbjct: 61  MDYKDDNGNWIGFDADMASAFAEELGVD---VEFVEIDWDNKVLELDGKSIDCVWNGMTL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164
           T   E++  +        + Q  ++   K         L   S  V+AG+  E  ++   
Sbjct: 118 TD--EVTSSMECTDAYLNNAQVVVVPAEKADKYQDTDSLKDLSFAVEAGSAGEKQVS--- 172

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
              N+  +        +      A   DA   D S + A  +        +     ++  
Sbjct: 173 ---NLNLNYTPVNAQADALMEVAAGTSDAAVID-SLMAAAMIGKGTGYADLTYTVSLNSE 228

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVT------AEELGITQKNINQ 263
                  +G      +  +   +M        AE+  +    I +
Sbjct: 229 EYGVGFRKGSDLAAELNKFFEKSMKDGTMKTCAEKYKVQAALIEE 273


>gi|168214789|ref|ZP_02640414.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens CPE str. F4969]
 gi|170713756|gb|EDT25938.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens CPE str. F4969]
          Length = 278

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 96/290 (33%), Gaps = 30/290 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K+ F     V+I+  + L              ++  +  IK+ G L  G++     + 
Sbjct: 1   MKKNIFKKMLSVAIIGGLTLSLAGCGAKTAKENGSSDKVAKIKESGKLVVGLSADYAPYE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+D  + ++  +  D   ++   +       ++++  ID+      
Sbjct: 61  FHIIKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163
            T   +    + F  I Y   QG +++K+    I  +  L G  +  Q G+     +   
Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKENKESIKGIGDLKGKKVGAQMGS-----IQAE 170

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                      + + V  +    +  + DA   ++    A   +       V    I + 
Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228

Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               A AI +G+ +  + V+ T   +    ++     +  ++       +
Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278


>gi|311032513|ref|ZP_07710603.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus
           sp. m3-13]
          Length = 272

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 13/227 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           ++L  ++  G L  G       F     +G   GFDV+   A++  +  +   ++++   
Sbjct: 40  NLLSKVEGEGELLVGTEGTYPPFTFHDESGKLTGFDVEIAEAIAEKMGVE---VKFMETQ 96

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQL 143
               F  L SK+ D+++         +      F           +       I S   +
Sbjct: 97  WDAMFAGLDSKRFDMIANQVGI--REDRLEKYDFSDHYITSAAVLVAKEDNDEIKSFEDI 154

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G     Q+ T+    +A  +KA          +   +      ++R D    D  ++  
Sbjct: 155 EGKKSA-QSLTSNYADIAREYKA-----EIEGVDGFNQAIELINSNRVDVTINDKLSVLD 208

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +       +  I+ +    +       +G  E    V+     ++ 
Sbjct: 209 FQKNRPNA-QIKIVDEAGDAAQSGMMFRKGSDELVEAVNKALAEIIE 254


>gi|262164883|ref|ZP_06032621.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio mimicus VM223]
 gi|262027263|gb|EEY45930.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio mimicus VM223]
          Length = 243

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     ++F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLA-DKVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALVDQLNAALEAVKENGEYA 234


>gi|170692720|ref|ZP_02883882.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia graminis C4D1M]
 gi|170142376|gb|EDT10542.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia graminis C4D1M]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    ++G   GFD+D    + + +    +K  ++  +      
Sbjct: 23  KDWTTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI  +   L G ++ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQVA--FSSKLFNTPTRLVAKKGSGILPTAESLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++A       + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEAKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   +    +        + + DT+    V      ++
Sbjct: 196 RGAGFDFVGKNLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240


>gi|240080270|ref|ZP_04724813.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae FA19]
 gi|240115222|ref|ZP_04729284.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae PID18]
 gi|260440960|ref|ZP_05794776.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae DGI2]
          Length = 274

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   + H    I S++ + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|325693524|gb|EGD35443.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK150]
          Length = 287

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVLALGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERADKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K + I S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEDIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +       ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKIFER-ITVESIIKDQGLDNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|170761692|ref|YP_001786564.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169408681|gb|ACA57092.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 274

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 10/251 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59
           +K  F+S+  ++ L  T  +  A    +IK+    +K G +     F  +   +   +GF
Sbjct: 6   FKKIFLSMSLVVALGVT-LTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    +       P    +   +       L + +ID ++     T   +      F 
Sbjct: 65  EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177
               + G      K    I S+  L G ++  Q GT    ++ DY   +         + 
Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +       R DA   D  A       +    +    P    ++         + E 
Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239

Query: 238 YNIVSWTHYAM 248
              ++     M
Sbjct: 240 IEKINKALDDM 250


>gi|260889291|ref|ZP_05900554.1| CjaC protein [Leptotrichia hofstadii F0254]
 gi|260860702|gb|EEX75202.1| CjaC protein [Leptotrichia hofstadii F0254]
          Length = 247

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 84/257 (32%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F V  L +  L       +            L+ G+N     F  V  NG   GFD
Sbjct: 1   MKKVFLVLTLVIFGLVSCGKKDSGQ--------KKLRVGLNAVFAPFEYV-ENGQVTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +  +   ++ +  +      AL++ +IDI+      T  R+    + F  
Sbjct: 52  VDMINEIGKNLGYE---VEIIDQSFDGLIPALKAGKIDIIVSGMSSTEERKK--SVDFTD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   + ++  K     + + LSG  I VQ GT  E+       A       +  E   
Sbjct: 107 DYFVSKETYLRKKGNTAVTPATLSGKKIGVQLGTIQEMEAKTINGA-----TVVPNESTV 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +A + DA   + +   A +     P   +          +  A+     +   +
Sbjct: 162 NTILDLKAGKIDAIILEKA--VAEEYMKKNPEMEIFDEKPAK---IGMAMAVNKGKNPEL 216

Query: 241 VSWTHYAMVTAEELGIT 257
           +       + AE   + 
Sbjct: 217 IKQ-----INAELKKMR 228


>gi|320178716|gb|EFW53679.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Shigella boydii ATCC 9905]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADFRLVVAKNSDIQPTVESLKGKRVGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|288555858|ref|YP_003427793.1| arginine ABC transporter arginine-binding protein [Bacillus
           pseudofirmus OF4]
 gi|288547018|gb|ADC50901.1| ABC transporter (arginine-binding protein) [Bacillus pseudofirmus
           OF4]
          Length = 285

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 87/257 (33%), Gaps = 36/257 (14%)

Query: 1   MYK----------DFFVSILCLIIL-FFTSFSTNASILGDIK-----------------K 32
           M K             V +  ++ +              +++                 +
Sbjct: 1   MKKYKWSVAGLSAILSVGLSAILSVGLLAGCGAEGDGPAEVEAPAEEPTEEVNEDATSGE 60

Query: 33  RGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            G L    +     +  V   +G+  GFD+D    ++S +  +   ++   ++      A
Sbjct: 61  GGTLIMATSADYPPYESVDLESGEIVGFDIDIANHIASELGYE---LEIQDVDFNGLIPA 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +++ + D +      T  R+    + F  I Y      +  + +G+S+V  L G ++ VQ
Sbjct: 118 MEAGRADFVLAGMTPTEERKE--NVDFSDIYYEAQNLIVSKEDQGLSAVEDLEGLTVGVQ 175

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  E    D  +           +R+ E+     A R DA   + +       +    
Sbjct: 176 LGSIQEGEAEDLAEEIGFNVE--KRDRIPELIQELLAGRLDAILMEDTVAAGYMESQSGL 233

Query: 212 SEHVILPDIISKSPLAP 228
           ++  +  + ++ S +A 
Sbjct: 234 AQFEVPSEELAGSAIAF 250


>gi|268686159|ref|ZP_06153021.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|268626443|gb|EEZ58843.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae SK-93-1035]
          Length = 275

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|239998563|ref|ZP_04718487.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae 35/02]
 gi|240013688|ref|ZP_04720601.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae DGI18]
 gi|240016128|ref|ZP_04722668.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae FA6140]
 gi|240120757|ref|ZP_04733719.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae PID24-1]
 gi|240123063|ref|ZP_04736019.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae PID332]
 gi|240125315|ref|ZP_04738201.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae SK-92-679]
          Length = 274

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S++ + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|167033329|ref|YP_001668560.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166859817|gb|ABY98224.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 250

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V A+    GFD+D   AL   +  +      +  + +    AL +
Sbjct: 23  TLRFATEGAYPPFNYVDADNKLHGFDIDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153
           ++ D +  +   T  R     +AF    Y       + K   I S      G ++  Q+ 
Sbjct: 80  RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T  +   D +          ++  ++E +A   A R D    D   L+     N     
Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMSKNGGDCC 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++     +K+  A A+ + D      ++    
Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228


>gi|229588843|ref|YP_002870962.1| putative amino acid transporter substrate-binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229360709|emb|CAY47567.1| putative amino acid transport system, substrate-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 259

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 86/232 (37%), Gaps = 12/232 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                S L   K+   L+ G++     F    A+G   GFD+D   A+ + +     K +
Sbjct: 14  CMAAGSALA--KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAEL---KVKCK 68

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++  +       L++ + D +  +   T +RE    + F    +      +  K  G S+
Sbjct: 69  WVESDFDGMIPGLKANKFDGVISSMTVTPVREK--AIDFSNELFSGPTSLVFKKGAGYST 126

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G S+  + GT  E           +      +   +++ A   + R DA   D+ 
Sbjct: 127 PESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTK--AYANQDQVYADLTSGRLDASVQDML 184

Query: 200 ALYALKLTNDRPSEHVI---LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 L +   + + +   + D +  S  A  I +G+TE   ++     A+
Sbjct: 185 QAELGFLKSPAGAGYEVSAAIDDPLLPSKTAIGIKKGNTELKALLDKGIKAL 236


>gi|262368132|pdb|3K4U|A Chain A, Crystal Structure Of Putative Binding Component Of Abc
           Transporter From Wolinella Succinogenes Dsm 1740
           Complexed With Lysine
 gi|262368133|pdb|3K4U|B Chain B, Crystal Structure Of Putative Binding Component Of Abc
           Transporter From Wolinella Succinogenes Dsm 1740
           Complexed With Lysine
 gi|262368134|pdb|3K4U|C Chain C, Crystal Structure Of Putative Binding Component Of Abc
           Transporter From Wolinella Succinogenes Dsm 1740
           Complexed With Lysine
 gi|262368135|pdb|3K4U|D Chain D, Crystal Structure Of Putative Binding Component Of Abc
           Transporter From Wolinella Succinogenes Dsm 1740
           Complexed With Lysine
 gi|262368136|pdb|3K4U|E Chain E, Crystal Structure Of Putative Binding Component Of Abc
           Transporter From Wolinella Succinogenes Dsm 1740
           Complexed With Lysine
 gi|262368137|pdb|3K4U|F Chain F, Crystal Structure Of Putative Binding Component Of Abc
           Transporter From Wolinella Succinogenes Dsm 1740
           Complexed With Lysine
          Length = 245

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 14/214 (6%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           RG L+ G+  G + F      G+  GFDVD  R  + A       ++ +P +       L
Sbjct: 4   RGELRVGLEPGYLPFEXKDKKGNVIGFDVDLAREXAKAXGVK---LKLVPTSWDGLIPGL 60

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICV 150
            +++ DI+      +  R  +L + F       GQ  ++ K     + S   L    + +
Sbjct: 61  VTEKFDIIISGXTISQER--NLRVNFVEPYIVVGQSLLVKKGLEKGVKSYKDLDKPELTL 118

Query: 151 QAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
                 + E      FK          ++   E        + D +  D+    A     
Sbjct: 119 VTKFGVSAEYAAKRLFK----NAKLKTYDTEAEAVQEVLNGKADXFIFDLPFNVAFXAQK 174

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +    V L   ++  PL  AI +GD ++ N ++
Sbjct: 175 GQGY-LVHLDTSLTYEPLGWAIKKGDPDFLNWLN 207


>gi|170734489|ref|YP_001766436.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169817731|gb|ACA92314.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 60/230 (26%), Gaps = 14/230 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  IK  G  + G       F      G   GFDVD   A++  +   P   Q++   
Sbjct: 25  DDLSQIKSAGVFRVGTEGTYAPFTYHDETGKLTGFDVDIATAIAQRLGVKP---QFVEGK 81

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQL 143
                  L   + D +      T  R+      F           I+      I S   L
Sbjct: 82  WDGLIAGLDVNRYDAVVNEVSITDARKA--KYDFSTPYITSHAVLIVRADNTTIRSFDDL 139

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G        T+    LA    A       +  +   E      + R DA   D  +   
Sbjct: 140 KGKKSA-NTLTSNFGKLAAAHGA-----DVVPVQGFNESIDLLTSGRVDATINDSLSYLD 193

Query: 204 LKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            +         +   D           + +G       +     A + A+
Sbjct: 194 FRKHKPDAKLKIAATDTSGAGDASGVLLRKGSPALVAAIDKAL-ADIKAD 242


>gi|240112482|ref|ZP_04726972.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae MS11]
 gi|240117509|ref|ZP_04731571.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae PID1]
 gi|268598549|ref|ZP_06132716.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae MS11]
 gi|268582680|gb|EEZ47356.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae MS11]
          Length = 274

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQAAISGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   + H    I S++ + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|256829241|ref|YP_003157969.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
 gi|256578417|gb|ACU89553.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
          Length = 246

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 83/258 (32%), Gaps = 25/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +L L ++   + + +            +   ++        + A+ +  GF 
Sbjct: 1   MRTRIALVLLALFLMASNALAKD------------VVFAVDATYPPMEMIDADKNIVGFG 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A+  A   +P             F  L S + D ++ +   T  R+    + F  
Sbjct: 49  PEVVMAMGKAGGFNP---ILKNTAWDGIFAGLASGKYDAIASSVSITEERK--QSMDFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   QG I+ K   ISSV+ L+G ++  Q GTT          A         ++ + 
Sbjct: 104 PYFEVKQGVIVPKGAAISSVADLAGKTVASQMGTTGYFVCKKIEGA-----TAKSYDEIG 158

Query: 181 EIDAAYRAHRCDAYTGD---ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    R DA   D    S          +      L    +   L  A+ +G+ E 
Sbjct: 159 LAVEDLYNGRIDAVIADDAVASNYALQHEQYSQKLTLAFLIAPEAPEYLGFAVNKGNKET 218

Query: 238 YNIVSWTHYAMVTAEELG 255
             +++    A+    E  
Sbjct: 219 VELINSALAAIKANGEYD 236


>gi|261339171|ref|ZP_05967029.1| hypothetical protein ENTCAN_05395 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319016|gb|EFC57954.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Enterobacter cancerogenus ATCC 35316]
          Length = 243

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 73/218 (33%), Gaps = 16/218 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++     F  + A+    GFD+D  +AL   +  D     +          +L+ 
Sbjct: 22  KINFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R  S  ++F    Y +    I  K    ++  QL G  I ++ GT
Sbjct: 79  KKYDAVISGMDITPER--SKQVSFTDPYYANSAVVIAKKG-AYTAFDQLKGKRIGMENGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L D           + ++  +      +  R D   GD + +     T   P   
Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLG 189

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248
                +         L  A+   +      ++    A+
Sbjct: 190 TATEKVTDPQYFGTGLGIAVRPDNKALLEKLNGALKAI 227


>gi|255505884|ref|ZP_05348662.3| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Bryantella formatexigens DSM 14469]
 gi|255265364|gb|EET58569.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Bryantella formatexigens DSM 14469]
          Length = 277

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L   ++    F   A      ++   L    N     +   + + +  G D
Sbjct: 4   MKK-LTAALLAGTMVLSFGFGAMA------EEDNVLVMATNAEFPPYEYHEGD-EIVGID 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    ++  +      ++   +       A+QS + DI       T   +    + F  
Sbjct: 56  AEVAALIAEELG---MTLEIEDMAFDSVLAAVQSGKADIAMAGLTVTE--DRMQSVNFTD 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 Q  I+ +   I+    LSG  + VQ GTT ++ ++D             + +  
Sbjct: 111 TYATAKQVIIVKEDSDIAGPDDLSGKIVGVQTGTTGDIYVSDE-----EGVTVERYNKGF 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A    + DA   D          N+      I+ +  +    A AI + + E    
Sbjct: 166 EAVQALTQGKIDAVVIDNEPAKVFVSENEG---IKIIDEAYADEEYAIAIAKDNDELLEK 222

Query: 241 VSWTHYAMVT 250
           V+     +  
Sbjct: 223 VNTALNTLKE 232


>gi|93005158|ref|YP_579595.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
           K5]
 gi|92392836|gb|ABE74111.1| extracellular solute-binding protein, family 3 [Psychrobacter
           cryohalolentis K5]
          Length = 305

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 83/260 (31%), Gaps = 26/260 (10%)

Query: 3   KDFFVSILCLIILFFT---------SFSTNASILGDIKKR------GFLKCGINTGLVGF 47
           K        L ++  +         + S   +     +K+        L+ G       F
Sbjct: 19  KPMLAVAAFLALVGCSNGQDKGAERTNSDANNTAETAEKKADATEGNVLRIGTEGAYAPF 78

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               A+G   GFD++   A+ + +       + +  +       L++ + D +      T
Sbjct: 79  NYTNADGTLGGFDIEIANAICADM---QVTCEIVAQDWDGIIPGLKAGKYDAIVAAMSVT 135

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFK 165
             R  +  +AF    + +   F+  K        V+ ++  SI  Q  T +   L + + 
Sbjct: 136 PER--AQQVAFTDPYFSNALVFLAKKDSTFDPAKVTDINAHSIAAQRSTISSQWLENTYP 193

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             +MK    +++ +        A R DA   D         +    +  +   +I     
Sbjct: 194 KADMK----LYDTLSNAFLDLGAGRVDAMISDKLPAIEWLSSTSGNNYVLKGAEIDINDN 249

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
            A A+   D      ++ + 
Sbjct: 250 FAIAVRPNDEALQAKINTSL 269


>gi|107024072|ref|YP_622399.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116691158|ref|YP_836781.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105894261|gb|ABF77426.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116649247|gb|ABK09888.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 60/230 (26%), Gaps = 14/230 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  IK  G  + G       F      G   GFDVD   A++  +   P   Q++   
Sbjct: 25  DDLSQIKSAGVFRVGTEGTYAPFTYHDETGKLTGFDVDIATAIAQRLGVKP---QFVEGK 81

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQL 143
                  L   + D +      T  R+      F           I+      I S   L
Sbjct: 82  WDGLIAGLDVNRYDAVVNEVSITDARKA--KYDFSTPYITSHAVLIVRADNTTIRSFDDL 139

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G        T+    LA    A       +  +   E      + R DA   D  +   
Sbjct: 140 KGKKSA-NTLTSNFGKLAAAHGA-----DVVPVQGFNESIDLLTSGRVDATINDSLSYLD 193

Query: 204 LKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            +         +   D           + +G       +     A + A+
Sbjct: 194 FRKHKPDAKLKIAATDTTGAGDASGVLLRKGSPALVAAIDKAL-ADIKAD 242


>gi|260654266|ref|ZP_05859756.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Jonquetella anthropi E3_33 E1]
 gi|260630899|gb|EEX49093.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Jonquetella anthropi E3_33 E1]
          Length = 240

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 11/214 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G  +    +  +  +G  +GFDV+   A+++ +     ++Q+  +       AL +
Sbjct: 23  VLKVGTESTYPPYEFIGPSGKLEGFDVELAEAVAAKLG---MEVQWQDMAFDALIPALLT 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ID+++     T  R   +   F          FI     G  S+ +L G  + VQ GT
Sbjct: 80  KKIDMIAAGMSATEERAKRVA--FSIPYEESVSAFITR-PDGPKSIEELKGKIVTVQLGT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + D F           F++ ++        R DA   D+        +     + 
Sbjct: 137 -----IQDTFADSMEGVTVKKFQKYDDCVREVVLGRADASLMDVPVAKDYVKSEQFGGKI 191

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +    IS    A A+ +   E    V     AM
Sbjct: 192 ALFEQKISTGDKALAMSKDAPELKEKVDAALKAM 225


>gi|91211605|ref|YP_541591.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Escherichia coli UTI89]
 gi|237704786|ref|ZP_04535267.1| histidine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
 gi|91073179|gb|ABE08060.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Escherichia coli UTI89]
 gi|222034065|emb|CAP76806.1| Histidine-binding periplasmic protein [Escherichia coli LF82]
 gi|226901152|gb|EEH87411.1| histidine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
 gi|294490305|gb|ADE89061.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli IHE3034]
 gi|307626154|gb|ADN70458.1| Histidine-binding periplasmic protein precursor [Escherichia coli
           UM146]
 gi|312946928|gb|ADR27755.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|315285929|gb|EFU45367.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 110-3]
 gi|323956075|gb|EGB51828.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H263]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  I V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRIGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|84385571|ref|ZP_00988602.1| ABC-type amino acid transport/signal transduction system [Vibrio
           splendidus 12B01]
 gi|84379551|gb|EAP96403.1| ABC-type amino acid transport/signal transduction system [Vibrio
           splendidus 12B01]
          Length = 243

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 29/259 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L      +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLASFNAAAQE-------------EIKFAMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCEEL---KATCTFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LKQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI   +  ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 AYYDNSAAFISF-EGKVADQAALEGKRVGVQNGSTHQSFLLEQM----TGVTAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
           +     +  R D+  GD + +       D  +   +   + ++         A+ + + E
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLT--YVGDQVTNQEYFGNGFGIAVNKSNQE 215

Query: 237 WYNIVSWTHYAMVTAEELG 255
             + ++    A+    E  
Sbjct: 216 LVDQLNVALAAVKANGEYD 234


>gi|294793181|ref|ZP_06758327.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 6_1_27]
 gi|294794789|ref|ZP_06759924.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 3_1_44]
 gi|294454151|gb|EFG22525.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 3_1_44]
 gi|294456126|gb|EFG24490.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 6_1_27]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 90/252 (35%), Gaps = 17/252 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++ +  +   +   N       ++ G L+ G  T    F   + +  + GFDV
Sbjct: 5   KKLTAIALVAIAAMGLLAGCGN-DKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++  +     K+++  +       A+QS  ID+++   + T  RE    L F  +
Sbjct: 63  DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 117

Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +      I ++ +L+G ++  Q GT                      +  
Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVEMAQKI-----PGTTVKQIDSN 172

Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             I    +A   D A   +  A+Y LK   D+  + V  P     + L   + +G+    
Sbjct: 173 ANIFMELKAGTIDGAIIDNAVAMYYLKQGADQDLKLVGEPTQSPGTVLG--VKKGNKALQ 230

Query: 239 NIVSWTHYAMVT 250
             V+     +  
Sbjct: 231 EAVNKALKELKE 242


>gi|224418023|ref|ZP_03656029.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491]
 gi|253827355|ref|ZP_04870240.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491]
 gi|313141562|ref|ZP_07803755.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491]
 gi|253510761|gb|EES89420.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491]
 gi|313130593|gb|EFR48210.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491]
          Length = 243

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 88/247 (35%), Gaps = 22/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  + L ++ F             +++  +  G+N     F   +   +  GFD
Sbjct: 1   MKNFLKIFSIILALIAFFGC-------EKKEEKSKVYVGMNADFAPFEYREGK-NIVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R ++        +++++ +       AL+  +ID++      T  R+    + F  
Sbjct: 53  VDLMREIAK---ISGIEVEFMDIQFDGLLPALELGKIDMIISGMTVTENRKKF--VNFSD 107

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  +++   + I + S LSG  + V  G T +L ++              F   
Sbjct: 108 SYFNSTQVILVNSENQNIGNFSDLSGKVVGVALGFTGDLVVSKL-----PNVSVQKFNTA 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++  A ++H+ +A   D       K       +  ++    +    A A+ + + E   
Sbjct: 163 SDLILALKSHKVEAVVLD---YETAKNYAAHNQDLKLIQSDAANEEYAIAMRKDEVELLQ 219

Query: 240 IVSWTHY 246
            V+    
Sbjct: 220 KVNEALK 226


>gi|268319123|ref|YP_003292779.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397498|emb|CAX66512.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 497

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 86/263 (32%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46
           M K    S    +++FF+  +                 S+L  IKK G L  G +     
Sbjct: 1   MKKTKLFSFFFALLMFFSLGATFIKPAQAASQKQIAEGSVLKKIKKSGELVVGTSADYPP 60

Query: 47  FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
                       + G D++  + ++  +      +    ++     +AL++ ++D++   
Sbjct: 61  LEFTASENGKTKYVGVDIELAKDIAKDLGVK---LVIKNMSFDSLLVALETGKVDMVISA 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLAD 162
              T  R+ S+  +            +  K     +S+  L G  +  Q G+     +  
Sbjct: 118 MTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKYTSIQSLKGQMVGAQTGSNQYNLVKS 177

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             K            ++  +  A ++ +  A   +   +      N+     V      +
Sbjct: 178 QMK----DSKLKGLGKINNLVLALQSGKVSAVVVEE-LIAKAYAENNSGLAAVRSNLKET 232

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
           ++  A AI +G  +    V+ T 
Sbjct: 233 QAGNAVAIAKGQDDLVAQVNKTI 255


>gi|163791315|ref|ZP_02185728.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Carnobacterium sp. AT7]
 gi|159873394|gb|EDP67485.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Carnobacterium sp. AT7]
          Length = 493

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 93/274 (33%), Gaps = 23/274 (8%)

Query: 2   YKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
            K  ++ +L LI +F             + L DI+++G L  G +     +     V   
Sbjct: 3   KKSLYLVVLSLIAVFSFFIPVETVFAADTALEDIQEKGTLVIGTSADFPPYEFHSTVNGK 62

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D+   + ++  +  +   ++   +       AL+S+++D++      T  R   
Sbjct: 63  DTIVGMDISIAQKIAEDLGVE---LKIEDIGFDSLLPALESEKVDMVISGMSPTEER--K 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F  + Y  GQ  ++ +       S + L G  + VQ G+  E    +         
Sbjct: 118 QSVDFSEVYYTGGQNIVVREADKEIYKSTADLKGLKVGVQTGSLQETLAQEQMP----DS 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAI 230
             +   +  ++  A + ++ +A   +  +  A    +++         +       A A 
Sbjct: 174 EILSLTKTTDLLLALKTNKVEAVLMEKPSAEAYVGNDNQILTFDGGFQLEEGEQGSAIAF 233

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
            +        V+ +   +    E  +    + + 
Sbjct: 234 KKDTQSLVAAVNSSLTEI---SEQDLISDYLEEA 264


>gi|291457927|ref|ZP_06597317.1| histidine-binding protein [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291419471|gb|EFE93190.1| histidine-binding protein [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 314

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 30/257 (11%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G    G +        V   G ++G+D++    ++  +  +       P+N   + + L
Sbjct: 75  SGKFTVGFDQEFPPMGFVDDKGGYQGYDLELAEEVAKRLGLEFVP---QPINWDAKDMEL 131

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            S  ID +          +     ++      + Q F++    GI +++ LSG ++ VQ 
Sbjct: 132 SSGNIDCIWNGFSMQGREDK---YSWVGPYMANEQVFVVKDNSGIETLADLSGKAVEVQK 188

Query: 153 GTTTELTLADYFKAHNMK--YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT--N 208
            ++    L +       +                  ++  CDA   D             
Sbjct: 189 DSSGLDALKEEENKKLKESFSSLTEVADYNTALMDLQSGACDAVCMDSVVAGYQITNSEK 248

Query: 209 DRP---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
             P    +  IL D +S         +G+ E    V                     ++ 
Sbjct: 249 KNPGSEEKMRILSDTLSAEEYGIGFRKGEDELAQSVRTVL----------------LEME 292

Query: 266 KDTTNPDVQR-FLGIDK 281
           KD +  ++ R + G D 
Sbjct: 293 KDGSTAEISRKWFGKDD 309


>gi|293446646|ref|ZP_06663068.1| histidine-binding periplasmic protein [Escherichia coli B088]
 gi|291323476|gb|EFE62904.1| histidine-binding periplasmic protein [Escherichia coli B088]
          Length = 266

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 34  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 90

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  GT
Sbjct: 91  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 148

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 149 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 206

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 207 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 259

Query: 270 NPDV 273
           + DV
Sbjct: 260 DFDV 263


>gi|270159600|ref|ZP_06188256.1| extracellular solute-binding family protein [Legionella longbeachae
           D-4968]
 gi|289165609|ref|YP_003455747.1| amino acid (glutamine) ABC transporter, periplasmic amino acid
           binding protein [Legionella longbeachae NSW150]
 gi|269987939|gb|EEZ94194.1| extracellular solute-binding family protein [Legionella longbeachae
           D-4968]
 gi|288858782|emb|CBJ12687.1| amino acid (glutamine) ABC transporter, periplasmic amino acid
           binding protein [Legionella longbeachae NSW150]
          Length = 250

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 19/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F +S+  LI      ++ ++      +    +   +      F      G+ KGFD
Sbjct: 1   MKIIFSISLAGLIFFISLCYADSSD-----ENTQAIHFAVAAEYPPFEY-NDYGEIKGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R ++  +        +  +       AL   Q+D        T  R       F  
Sbjct: 55  IDLARLIAKKLGKVAY---FDAMQFSGILPALSLGQVDAAISTITITKQRNK--NFDFTE 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             YF+    +  ++K I S  +L+   I VQ GTT E+ L    K +      +V +   
Sbjct: 110 PYYFESMAAVFPQEKPIKSAKELTDKKIAVQLGTTMEIWL----KKNVPDASILVMDNNN 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  AA +A   D    D          N             S+     A+ +G       
Sbjct: 166 QTIAALKAGHVDLVLVDGIQGAVYSQKNPG---LSFSVIAHSEDGYGIALKKGSP-LTQK 221

Query: 241 VSWTHYAMVTAEEL 254
           ++   + +  + EL
Sbjct: 222 LNNVLHDLEQSGEL 235


>gi|260774958|ref|ZP_05883858.1| cyclohexadienyl dehydratase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609048|gb|EEX35207.1| cyclohexadienyl dehydratase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 258

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F+  L L IL     +   S L +I   G L+ G                 +KGF
Sbjct: 1   MNK--FILALGLCILSIGQAAAETSRLHEILDSGVLRVGTTGDWNPMTMKDPATNSYKGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
                          +  S  S    A + V A   T  E  + ++F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLQKFSDWSDFDKAEVKVAATLGTVQEKMVKEFFPSAKH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|291301451|ref|YP_003512729.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
 gi|290570671|gb|ADD43636.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
          Length = 323

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 10/234 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--PSKIQYLP 82
            +L D  K G L  G+        E K +  ++GFD++  + L   +F      K+++  
Sbjct: 71  GLLADAVKDGKLVVGVKPDQPLIGEKKGS-TYEGFDIEMAKLLGMRLFGKGGEEKVEFKE 129

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVS 141
             +  R   L S ++D++  +       +     +F     +      +  + K I ++ 
Sbjct: 130 TTSDNREAFLNSGEVDVVIASYSM--YPDRVKQFSFAGPYLFTGQNALVSAENKDIKTID 187

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  +C+  G+ +   L    K  N K          +  A  +    DA + D + L
Sbjct: 188 DLAGKKVCIAKGSGSIDNL----KKENPKAKIETRANYGDCAAQVKDGTFDAVSTDETIL 243

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           Y  K  +      +   +  +  P    + +G+    + ++    A    E+  
Sbjct: 244 YGYKSQDKEAFRILDSSENFTDEPYGIGMKKGNDAAKDYINEMIKAAYENEDWD 297


>gi|91784368|ref|YP_559574.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia xenovorans LB400]
 gi|91688322|gb|ABE31522.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 260

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 66/248 (26%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L      S +  A  L  IK  G  + G       F     +G   GFD
Sbjct: 1   MKSIRSILLIALFQAVAVSSAFAADELAQIKSAGVFRIGTEGTYAPFTYHDESGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P   Q++          L   + D +      T  R++     F  
Sbjct: 61  VEIGTAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAITDARKV--KYDFSD 115

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +      I +   L G        +      A            I  +  
Sbjct: 116 PYITSHAALIVQSNNTTIRNFDDLKGKKSANTLTSNFGKIAAA------HGAEVIPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEW 237
            E      + R DA   D  +    K         +        S    A  I +G+ + 
Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSSDSSDKSAVLIRKGNPDL 229

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 230 QAAINKAL 237


>gi|62182800|ref|YP_219217.1| putative arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|205355113|ref|YP_002228914.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859500|ref|YP_002246151.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|62130433|gb|AAX68136.1| putative arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|205274894|emb|CAR39960.1| probable arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|206711303|emb|CAR35681.1| probable arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|322717302|gb|EFZ08873.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326626043|gb|EGE32388.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 239

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 87/251 (34%), Gaps = 26/251 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +      +L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           R +   GD   + A+        ++ I+ +  S           A+ +G+      ++  
Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219

Query: 245 HYAMVTAEELG 255
              +  + E  
Sbjct: 220 LDKVKASPEYA 230


>gi|15802856|ref|NP_288883.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Escherichia coli O157:H7 EDL933]
 gi|15832447|ref|NP_311220.1| histidine transport system histidine-binding periplasmic protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|16130244|ref|NP_416812.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26248697|ref|NP_754737.1| histidine-binding periplasmic protein [Escherichia coli CFT073]
 gi|74312826|ref|YP_311245.1| high-affinity histidine transport system histidine-binding
           periplasmic protein [Shigella sonnei Ss046]
 gi|82544790|ref|YP_408737.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella boydii Sb227]
 gi|89109129|ref|AP_002909.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. W3110]
 gi|110642513|ref|YP_670243.1| histidine-binding periplasmic protein precursor [Escherichia coli
           536]
 gi|157159349|ref|YP_001463653.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli E24377A]
 gi|157161796|ref|YP_001459114.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli HS]
 gi|168748161|ref|ZP_02773183.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|168755064|ref|ZP_02780071.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|168761250|ref|ZP_02786257.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767938|ref|ZP_02792945.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|168772962|ref|ZP_02797969.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|168780167|ref|ZP_02805174.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787219|ref|ZP_02812226.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC869]
 gi|168798482|ref|ZP_02823489.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC508]
 gi|170019382|ref|YP_001724336.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|170081925|ref|YP_001731245.1| histidine/lysine/arginine/ornithine ABC transporter
           periplasmic-binding protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|170680432|ref|YP_001744509.1| histidine ABC transporter periplasmic histidine-binding protein
           [Escherichia coli SMS-3-5]
 gi|187731129|ref|YP_001881131.1| histidine ABC transporter periplasmic histidine-binding protein
           [Shigella boydii CDC 3083-94]
 gi|188496222|ref|ZP_03003492.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli 53638]
 gi|191169474|ref|ZP_03031208.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli B7A]
 gi|191170231|ref|ZP_03031785.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli F11]
 gi|193062387|ref|ZP_03043482.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli E22]
 gi|193068140|ref|ZP_03049104.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli E110019]
 gi|194432830|ref|ZP_03065114.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Shigella dysenteriae 1012]
 gi|195935688|ref|ZP_03081070.1| histidine/lysine/arginine/ornithine ABC transporter
           periplasmic-binding protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208807851|ref|ZP_03250188.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208812927|ref|ZP_03254256.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208819389|ref|ZP_03259709.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209398498|ref|YP_002271718.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|209919809|ref|YP_002293893.1| histidine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|215487522|ref|YP_002329953.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217326673|ref|ZP_03442756.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218554865|ref|YP_002387778.1| histidine/lysine/arginine/ornithine ABC transporter
           periplasmic-binding protein [Escherichia coli IAI1]
 gi|218690469|ref|YP_002398681.1| histidine/lysine/arginine/ornithine ABC transporter subunit
           periplasmic-binding protein [Escherichia coli ED1a]
 gi|218695908|ref|YP_002403575.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli 55989]
 gi|218700785|ref|YP_002408414.1| histidine/lysine/arginine/ornithine ABC transporter subunit
           periplasmic-binding protein [Escherichia coli IAI39]
 gi|227887367|ref|ZP_04005172.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Escherichia coli 83972]
 gi|238901484|ref|YP_002927280.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|253772767|ref|YP_003035598.1| cationic amino acid ABC transporter periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162318|ref|YP_003045426.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|254794202|ref|YP_003079039.1| histidine/lysine/arginine/ornithine ABC transporter
           periplasmic-binding protein [Escherichia coli O157:H7
           str. TW14359]
 gi|256017533|ref|ZP_05431398.1| histidine/lysine/arginine/ornithine transporter subunit,
           periplasmic-binding component of ABC superfamily protein
           [Shigella sp. D9]
 gi|256022006|ref|ZP_05435871.1| histidine/lysine/arginine/ornithine transporter subunit,
           periplasmic-binding component of ABC superfamily protein
           [Escherichia sp. 4_1_40B]
 gi|260844896|ref|YP_003222674.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O103:H2 str. 12009]
 gi|260856353|ref|YP_003230244.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O26:H11 str. 11368]
 gi|260869031|ref|YP_003235433.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O111:H- str. 11128]
 gi|261223236|ref|ZP_05937517.1| histidine/lysine/arginine/ornithine transporter subunit,
           periplasmic-binding component of ABC superfamily protein
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261259214|ref|ZP_05951747.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O157:H7 str. FRIK966]
 gi|293415601|ref|ZP_06658244.1| histidine transport system substrate-binding protein [Escherichia
           coli B185]
 gi|300818088|ref|ZP_07098300.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 107-1]
 gi|300822183|ref|ZP_07102325.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 119-7]
 gi|300903699|ref|ZP_07121614.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 84-1]
 gi|300918519|ref|ZP_07135112.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 115-1]
 gi|300924578|ref|ZP_07140540.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 182-1]
 gi|300931333|ref|ZP_07146665.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 187-1]
 gi|300948542|ref|ZP_07162636.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 116-1]
 gi|300956423|ref|ZP_07168714.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 175-1]
 gi|300980889|ref|ZP_07175235.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 200-1]
 gi|300983442|ref|ZP_07176591.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 45-1]
 gi|301023556|ref|ZP_07187320.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 196-1]
 gi|301024140|ref|ZP_07187850.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 69-1]
 gi|301049067|ref|ZP_07196051.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 185-1]
 gi|301303229|ref|ZP_07209354.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 124-1]
 gi|301328810|ref|ZP_07221855.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 78-1]
 gi|301647588|ref|ZP_07247385.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 146-1]
 gi|306814579|ref|ZP_07448741.1| Histidine-binding periplasmic protein precursor [Escherichia coli
           NC101]
 gi|307138974|ref|ZP_07498330.1| Histidine-binding periplasmic protein precursor [Escherichia coli
           H736]
 gi|307311130|ref|ZP_07590774.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|309793192|ref|ZP_07687620.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 145-7]
 gi|312967609|ref|ZP_07781824.1| histidine-binding periplasmic protein [Escherichia coli 2362-75]
 gi|312973431|ref|ZP_07787603.1| histidine-binding periplasmic protein [Escherichia coli 1827-70]
 gi|331642948|ref|ZP_08344083.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli H736]
 gi|331653752|ref|ZP_08354753.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli M718]
 gi|331669008|ref|ZP_08369856.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA271]
 gi|331673812|ref|ZP_08374575.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA280]
 gi|331678255|ref|ZP_08378930.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli H591]
 gi|331683980|ref|ZP_08384576.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli H299]
 gi|84028918|sp|P0AEU2|HISJ_ECO57 RecName: Full=Histidine-binding periplasmic protein; Short=HBP;
           Flags: Precursor
 gi|84028919|sp|P0AEU1|HISJ_ECOL6 RecName: Full=Histidine-binding periplasmic protein; Short=HBP;
           Flags: Precursor
 gi|84028920|sp|P0AEU0|HISJ_ECOLI RecName: Full=Histidine-binding periplasmic protein; Short=HBP;
           Flags: Precursor
 gi|12516668|gb|AAG57438.1|AE005463_1 histidine-binding periplasmic protein of high-affinity histidine
           transport system [Escherichia coli O157:H7 str. EDL933]
 gi|26109102|gb|AAN81305.1|AE016763_264 Histidine-binding periplasmic protein precursor [Escherichia coli
           CFT073]
 gi|1788648|gb|AAC75369.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1799690|dbj|BAA16155.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|13362663|dbj|BAB36616.1| histidine transport system histidine-binding periplasmic protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|73856303|gb|AAZ89010.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella sonnei Ss046]
 gi|81246201|gb|ABB66909.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella boydii Sb227]
 gi|110344105|gb|ABG70342.1| histidine-binding periplasmic protein precursor [Escherichia coli
           536]
 gi|157067476|gb|ABV06731.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli HS]
 gi|157081379|gb|ABV21087.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli E24377A]
 gi|169754310|gb|ACA77009.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli ATCC 8739]
 gi|169889760|gb|ACB03467.1| histidine/lysine/arginine/ornithine transporter subunit;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170518150|gb|ACB16328.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli SMS-3-5]
 gi|187428121|gb|ACD07395.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Shigella boydii CDC 3083-94]
 gi|187771186|gb|EDU35030.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|188017297|gb|EDU55419.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|188491421|gb|EDU66524.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli 53638]
 gi|189001988|gb|EDU70974.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|189357698|gb|EDU76117.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|189362875|gb|EDU81294.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|189368291|gb|EDU86707.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372805|gb|EDU91221.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC869]
 gi|189378999|gb|EDU97415.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC508]
 gi|190900476|gb|EDV60291.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli B7A]
 gi|190909747|gb|EDV69332.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli F11]
 gi|192932053|gb|EDV84652.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli E22]
 gi|192958419|gb|EDV88858.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli E110019]
 gi|194418818|gb|EDX34903.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Shigella dysenteriae 1012]
 gi|208727652|gb|EDZ77253.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208734204|gb|EDZ82891.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208739512|gb|EDZ87194.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209159898|gb|ACI37331.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|209764878|gb|ACI80751.1| histidine transport system histidine-binding periplasmic protein
           [Escherichia coli]
 gi|209764880|gb|ACI80752.1| histidine transport system histidine-binding periplasmic protein
           [Escherichia coli]
 gi|209764882|gb|ACI80753.1| histidine transport system histidine-binding periplasmic protein
           [Escherichia coli]
 gi|209764886|gb|ACI80755.1| histidine transport system histidine-binding periplasmic protein
           [Escherichia coli]
 gi|209913068|dbj|BAG78142.1| histidine ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|215265594|emb|CAS09997.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217319040|gb|EEC27465.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|218352640|emb|CAU98421.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli 55989]
 gi|218361633|emb|CAQ99227.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli IAI1]
 gi|218370771|emb|CAR18584.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli IAI39]
 gi|218428033|emb|CAR08952.2| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli ED1a]
 gi|227835717|gb|EEJ46183.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Escherichia coli 83972]
 gi|238861423|gb|ACR63421.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|242377942|emb|CAQ32711.1| hisJ, subunit of histidine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253323811|gb|ACT28413.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974219|gb|ACT39890.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|253978386|gb|ACT44056.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BL21(DE3)]
 gi|254593602|gb|ACT72963.1| histidine/lysine/arginine/ornithine transporter subunit,
           periplasmic-binding component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|257755002|dbj|BAI26504.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O26:H11 str. 11368]
 gi|257760043|dbj|BAI31540.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O103:H2 str. 12009]
 gi|257765387|dbj|BAI36882.1| histidine/lysine/arginine/ornithine transporter subunit HisJ
           [Escherichia coli O111:H- str. 11128]
 gi|260448597|gb|ACX39019.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli DH1]
 gi|281179395|dbj|BAI55725.1| histidine ABC transporter substrate binding component [Escherichia
           coli SE15]
 gi|284922297|emb|CBG35382.1| histidine ABC transporter, substrate-binding periplasmic protein
           [Escherichia coli 042]
 gi|291433249|gb|EFF06228.1| histidine transport system substrate-binding protein [Escherichia
           coli B185]
 gi|299880791|gb|EFI89002.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 196-1]
 gi|300299114|gb|EFJ55499.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 185-1]
 gi|300307702|gb|EFJ62222.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 200-1]
 gi|300316772|gb|EFJ66556.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 175-1]
 gi|300396684|gb|EFJ80222.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 69-1]
 gi|300404281|gb|EFJ87819.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 84-1]
 gi|300408530|gb|EFJ92068.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 45-1]
 gi|300414333|gb|EFJ97643.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 115-1]
 gi|300419209|gb|EFK02520.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 182-1]
 gi|300451952|gb|EFK15572.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 116-1]
 gi|300460838|gb|EFK24331.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 187-1]
 gi|300525313|gb|EFK46382.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 119-7]
 gi|300529232|gb|EFK50294.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 107-1]
 gi|300841403|gb|EFK69163.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 124-1]
 gi|300844810|gb|EFK72570.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 78-1]
 gi|301074278|gb|EFK89084.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 146-1]
 gi|305851973|gb|EFM52425.1| Histidine-binding periplasmic protein precursor [Escherichia coli
           NC101]
 gi|306908636|gb|EFN39133.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli W]
 gi|307554370|gb|ADN47145.1| histidine-binding periplasmic protein precursor [Escherichia coli
           ABU 83972]
 gi|308123478|gb|EFO60740.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 145-7]
 gi|309702621|emb|CBJ01950.1| histidine ABC transporter, substrate-binding periplasmic protein
           [Escherichia coli ETEC H10407]
 gi|310332026|gb|EFP99261.1| histidine-binding periplasmic protein [Escherichia coli 1827-70]
 gi|312287806|gb|EFR15711.1| histidine-binding periplasmic protein [Escherichia coli 2362-75]
 gi|315061602|gb|ADT75929.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli W]
 gi|315136944|dbj|BAJ44103.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli DH1]
 gi|315255246|gb|EFU35214.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 85-1]
 gi|315292286|gb|EFU51638.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 153-1]
 gi|315615578|gb|EFU96210.1| histidine-binding periplasmic protein [Escherichia coli 3431]
 gi|320174665|gb|EFW49798.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Shigella dysenteriae CDC 74-1112]
 gi|320183765|gb|EFW58599.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Shigella flexneri CDC 796-83]
 gi|320192067|gb|EFW66712.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Escherichia coli O157:H7 str. EC1212]
 gi|320196177|gb|EFW70801.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Escherichia coli WV_060327]
 gi|320199900|gb|EFW74489.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Escherichia coli EC4100B]
 gi|320641137|gb|EFX10616.1| histidine ABC transporter substrate-binding protein HisJ
           [Escherichia coli O157:H7 str. G5101]
 gi|320646525|gb|EFX15444.1| histidine ABC transporter substrate-binding protein HisJ
           [Escherichia coli O157:H- str. 493-89]
 gi|320651622|gb|EFX20002.1| histidine ABC transporter substrate-binding protein HisJ
           [Escherichia coli O157:H- str. H 2687]
 gi|320657374|gb|EFX25176.1| histidine ABC transporter substrate-binding protein HisJ
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320667894|gb|EFX34802.1| histidine ABC transporter substrate-binding protein HisJ
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323156460|gb|EFZ42615.1| histidine-binding periplasmic protein [Escherichia coli EPECa14]
 gi|323161646|gb|EFZ47531.1| histidine-binding periplasmic protein [Escherichia coli E128010]
 gi|323171992|gb|EFZ57636.1| histidine-binding periplasmic protein [Escherichia coli LT-68]
 gi|323176765|gb|EFZ62355.1| histidine-binding periplasmic protein [Escherichia coli 1180]
 gi|323184371|gb|EFZ69747.1| histidine-binding periplasmic protein [Escherichia coli 1357]
 gi|323187966|gb|EFZ73261.1| histidine-binding periplasmic protein [Escherichia coli RN587/1]
 gi|323377817|gb|ADX50085.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Escherichia coli KO11]
 gi|323936599|gb|EGB32886.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1520]
 gi|323940994|gb|EGB37181.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E482]
 gi|323944822|gb|EGB40888.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H120]
 gi|323967750|gb|EGB63162.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli M863]
 gi|323977490|gb|EGB72576.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TW10509]
 gi|324006681|gb|EGB75900.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 57-2]
 gi|324013189|gb|EGB82408.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 60-1]
 gi|324020831|gb|EGB90050.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli MS 117-3]
 gi|324112846|gb|EGC06822.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
 gi|324117813|gb|EGC11712.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1167]
 gi|325496651|gb|EGC94510.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Escherichia fergusonii ECD227]
 gi|326339662|gb|EGD63473.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Escherichia coli O157:H7 str. 1125]
 gi|326344124|gb|EGD67885.1| Histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Escherichia coli O157:H7 str. 1044]
 gi|327252580|gb|EGE64239.1| histidine-binding periplasmic protein [Escherichia coli STEC_7v]
 gi|331039746|gb|EGI11966.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli H736]
 gi|331048601|gb|EGI20677.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli M718]
 gi|331064202|gb|EGI36113.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA271]
 gi|331069085|gb|EGI40477.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli TA280]
 gi|331074715|gb|EGI46035.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli H591]
 gi|331078932|gb|EGI50134.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli H299]
 gi|332088440|gb|EGI93558.1| histidine-binding periplasmic protein [Shigella boydii 5216-82]
 gi|332090192|gb|EGI95291.1| histidine-binding periplasmic protein [Shigella dysenteriae 155-74]
 gi|332093495|gb|EGI98553.1| histidine-binding periplasmic protein [Shigella boydii 3594-74]
 gi|332100893|gb|EGJ04239.1| histidine/lysine/arginine/ornithine transporter subunit [Shigella
           sp. D9]
          Length = 260

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|283767497|ref|ZP_06340412.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus H19]
 gi|283461376|gb|EFC08460.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus H19]
          Length = 259

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 13/213 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVMIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +      + R D    D  +    K       
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201


>gi|184155488|ref|YP_001843828.1| putative amino acid ABC transporter substrate binding component
           [Lactobacillus fermentum IFO 3956]
 gi|183226832|dbj|BAG27348.1| putative amino acid ABC transporter substrate binding component
           [Lactobacillus fermentum IFO 3956]
          Length = 276

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 93/270 (34%), Gaps = 29/270 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           K +   ++   ++   + S         S + DIKK+G L  G +     +         
Sbjct: 4   KKWLKMLMVAALVVMGAVSLAGCSSSSDSSVQDIKKKGELVVGTSADYPPYEFQIVKNGK 63

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G+DV     ++  I      ++++ +        LQ+K+ D++     WT  R   
Sbjct: 64  QQIVGYDVKLAHLIAKNIGVKK--VRFVNIAFPSLISELQNKKFDMVMAGMVWTKERAK- 120

Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             ++F    +  GQ  ++ K  +   S +S L GA++  Q  +  E              
Sbjct: 121 -AVSFSSTYHHGGQVLLVSKANENKYSGISALKGATLGAQQSSEQET-----IGKSLSGV 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SP 225
             +    +  +    +A   D      ++  A     + P+++ I  +I  K       P
Sbjct: 175 KLVTESSITTLSQEVKAGTLDGLILAQTS--ADAFVAEHPNDYAIAKNITFKISAKTSDP 232

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + + D     +V+ T      + EL 
Sbjct: 233 -RVVVRKSDKALLKVVNKTIKDAKKSGELD 261


>gi|17548702|ref|NP_522042.1| substrate-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17430950|emb|CAD17632.1| probable substrate-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 255

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 13/223 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A    +IK+ G L          F     +    GF+++  +A+   +      I++  
Sbjct: 22  QARSYEEIKQSGKLIVATGGEFPPFNYFAGS-TLTGFEIEVAQAVVKKMG---LAIEWKT 77

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+       LQ  + D++  +   T  R     + F    Y  G   +      I + + 
Sbjct: 78  LSFDSLLAGLQQNRWDLVISSHGVTEARAK--AVDFTSPHYCSGSSIVAR-DPAIRTAAD 134

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+   + VQ G+T    +    K          F +  +   A  + R DA+  D     
Sbjct: 135 LTDKVVAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FV 188

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           AL      P   + L   +    +A A+ +G+T      +   
Sbjct: 189 ALAAIQSNPGAGLKLGSPLFVERIAAAVAKGNTALAASYNTAL 231


>gi|330872634|gb|EGH06783.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 247

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 77/248 (31%), Gaps = 24/248 (9%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L        S S  A  +         K GI      F    A+G   GFD +  +AL 
Sbjct: 1   MLIAAATLAFSGSAFAETM---------KMGIEGAYPPFNNKDASGQVVGFDYEIGQALC 51

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           + +  +   +     +      AL + + D L  +   T  R+    + F    Y +   
Sbjct: 52  ARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNPYYSNKLQ 106

Query: 129 FIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           FI  K   I       +   L+G S+  Q  T     L D            +++  E  
Sbjct: 107 FIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKLYDTQENA 162

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                + R DA   D    +    +    +       ++    +  A+ +GD      ++
Sbjct: 163 FLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDDALRERLN 222

Query: 243 WTHYAMVT 250
                ++ 
Sbjct: 223 AALKEIIA 230


>gi|254493284|ref|ZP_05106455.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae 1291]
 gi|268596419|ref|ZP_06130586.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19]
 gi|268600902|ref|ZP_06135069.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae PID18]
 gi|291044288|ref|ZP_06569997.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|226512324|gb|EEH61669.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae 1291]
 gi|268550207|gb|EEZ45226.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19]
 gi|268585033|gb|EEZ49709.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae PID18]
 gi|291011182|gb|EFE03178.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
          Length = 275

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   + H    I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|169343527|ref|ZP_02864526.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens C str. JGS1495]
 gi|169298087|gb|EDS80177.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens C str. JGS1495]
          Length = 519

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 90/246 (36%), Gaps = 13/246 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F++I  L+++     + + +I  +   +  +    +     F  +   G+ KGF+VD   
Sbjct: 26  FLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELKGFEVDVWN 84

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +   +  D   +++   +    F  L+S +++ ++     T  RE      F     + 
Sbjct: 85  EIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYYFSEPYVYS 139

Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           G   I+ K    I S   L G  + V  G+  E  + D  K  N +   + ++  +    
Sbjct: 140 GAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKMVKD--KDENNEIKILTYQNTDAAFN 197

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVS 242
                R DA   D  +  A+    ++     +  + I K   A   ++ +   +    V+
Sbjct: 198 ELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKGKDLSENVN 255

Query: 243 WTHYAM 248
                M
Sbjct: 256 KALDEM 261


>gi|158421866|ref|YP_001523158.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158328755|dbj|BAF86240.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 282

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 100/284 (35%), Gaps = 27/284 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +   +S+LC+  +   +     +   L  I+ R  ++  + T    +  V  +   +G
Sbjct: 20  MDRRSILSLLCVSAMLGLAAPAAHAEDALEAIQSRKAVRIAVPTDYPPYGFVGPDLKPQG 79

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D    +   +      ++ +P+++  R   LQ+ ++D++         RE    L F
Sbjct: 80  LDIDMAELIGKKMGVK---VELVPVSSANRIPYLQTGKVDLVISTLGKNAEREKV--LDF 134

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   Q     K   + +   ++G S+ V  G   +  L               +E 
Sbjct: 135 SSAYAPFYQAVFGGKSVPVKAPGDMAGHSVAVTRGAMEDQELEKVTP---PGVTVKRYED 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                AAY A + +      S+  A  +    P  +     +I +SP    I +G+    
Sbjct: 192 NAATAAAYVAGQTELVAI--SSAAAGTIMMKNPQTNTEFKFLIKESPCFIGIAKGEDTLK 249

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282
             V+      + AE        I+ +SK        ++LG +  
Sbjct: 250 AKVN-----AIIAEAKK--DGTIDAMSK--------KWLGREAG 278


>gi|311071019|ref|YP_003975942.1| cystine ABC transporter substrate-binding lipoprotein [Bacillus
           atrophaeus 1942]
 gi|310871536|gb|ADP35011.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus
           atrophaeus 1942]
          Length = 268

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 77/263 (29%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K FF   + +      +            + ++ +   IK++G L  G       F  
Sbjct: 1   MKKAFFALCMMVSFAVLAACGSSSDNGSKDNAKDSDLWASIKEKGVLTVGTEGTYEPFTY 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV+     +  +        +        F  L SK+ D+++     T 
Sbjct: 61  HDKKTDKLTGYDVEVITEAAKRLGLKAE---FKETQWDSMFAGLNSKRFDVIANQVGKT- 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +      F           +  K    I+S + + G +   Q+ T+    LA+   A 
Sbjct: 117 --DREGKYDFSDKYTTSNAVVVTKKNNKDITSEADVKGKTSA-QSLTSNYNQLAEKAGAK 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                      + +     +  R D    D  A+     T+   +  +       +    
Sbjct: 174 VEGIE-----GMAQAFQLIQQGRVDMTYNDKLAVLNYLKTSGNKNLKIAFETGDPQDTF- 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
            A  +G  E  + V+     M  
Sbjct: 228 FAFRKGSGELTDQVNKALKEMKE 250


>gi|262173971|ref|ZP_06041648.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio mimicus MB-451]
 gi|261891329|gb|EEY37316.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio mimicus MB-451]
          Length = 243

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     ++F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSWQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVIAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALVDQLNAALEAVKENGEYA 234


>gi|229916229|ref|YP_002884875.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
 gi|229467658|gb|ACQ69430.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
          Length = 263

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 19/261 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANG-- 54
           M K F    L  +  F  +   +     S   D +    +  G +     +  V      
Sbjct: 1   MKKGFLALCLAGLAAFSVACGADVNEGGSTSTDGEDDKVIVMGTSADYFPYEFVDTANGD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFD+D  + ++  +  +   ++   ++      AL + ++D +      T  R+   
Sbjct: 61  EIVGFDIDIAKKVAENMGYE---LKIEDMDFGSLLGALNAGRVDFVMAGMTPTEERKE-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F  I +      +  K   + S+  L G  I VQ G+  E    D           +
Sbjct: 116 NADFSDIYFTAVNLILS-KDDSLQSLEDLKGKKIGVQLGSIQEGIAQDQI----TDAEIV 170

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              ++ EI    +  R DA   + +        +   +   I+ +  + S  A A  + D
Sbjct: 171 SLNKIPEIIQEIKTGRIDAMVIEDTVAKKYLEQDSELTTFEIVDEEEAGS--AAAFRK-D 227

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E  +  +     M+ + E+ 
Sbjct: 228 DELRDQFNEELKKMIDSGEIE 248


>gi|253681237|ref|ZP_04862035.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum D str. 1873]
 gi|253562475|gb|EES91926.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum D str. 1873]
          Length = 276

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 98/292 (33%), Gaps = 34/292 (11%)

Query: 1   MYK-DFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K      I+C ++L   +             N   +  IKK G L  G       +  
Sbjct: 1   MLKGKKLKFIICSLMLTMGATVFVGCGNKNQGKNIPKIEQIKKSGKLVLGTCADYPPYEV 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                   +  GFD+D  + ++  +      ++   ++     L+++S ++D++    + 
Sbjct: 61  HKVKDGKDEIVGFDIDIAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKVDLVLSGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  RE    + F  I Y   Q  I+ K     + ++  LSG  I  Q  +  E    +  
Sbjct: 118 TPAREK--EIDFSKIYYRAKQSVIIRKDDKDKLKNLETLSGKKIGAQITSLQEKIAKEEI 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           K  N     I   +V E+    +  + DA   +     A             +       
Sbjct: 176 KGAN----VISLGKVNELVLGLKGKKTDAVIVEEPVAKAYVAKYPELMIAN-INVGKPNE 230

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
             A  I +G  ++ + V+ T           +  KN  Q   D  + +++  
Sbjct: 231 GSAVGIQKGSKDFLDSVNKTID--------RLNSKNEIQKMIDKASEELKEL 274


>gi|296329885|ref|ZP_06872369.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305676611|ref|YP_003868283.1| putative ABC transporter binding lipoprotein [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296152924|gb|EFG93789.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305414855|gb|ADM39974.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 264

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 79/248 (31%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  +  +    +L   S   N +     +    L  G       FA    NG   GFD
Sbjct: 1   MKKKKWTVLFVAALLAVLSACGNGNSSSK-EDDNVLHVGATGQSYPFAYK-ENGKLTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  I     K+ +  L        LQ+ ++D +S     T  R+      F  
Sbjct: 59  VEVMEAVAKKI---DMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTDERKEM--YHFTE 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I SV  L G ++    G+     L        +  +   +E  
Sbjct: 114 PYAYAGTQIVVKKDNHDIKSVDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYETQ 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237
           E         R DAY    + L A       P    +  D I    +A    + D   + 
Sbjct: 172 EGTLKDVAYGRVDAYVNSRTVLIAQMKKTGLP--LKLAGDPIVYEQVAFPFAKDDAHDKL 229

Query: 238 YNIVSWTH 245
              V+   
Sbjct: 230 RKKVNKAL 237


>gi|194098107|ref|YP_002001155.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae NCCP11945]
 gi|268594422|ref|ZP_06128589.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02]
 gi|268681689|ref|ZP_06148551.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae PID332]
 gi|268683916|ref|ZP_06150778.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|193933397|gb|ACF29221.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae NCCP11945]
 gi|268547811|gb|EEZ43229.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02]
 gi|268621973|gb|EEZ54373.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae PID332]
 gi|268624200|gb|EEZ56600.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|317163838|gb|ADV07379.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 275

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|66047101|ref|YP_236942.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257808|gb|AAY38904.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 260

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 93/276 (33%), Gaps = 29/276 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +     K +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVKCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IYFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +++ +   + R DA   D+       L +   +++ +   I             D+E   
Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPI-------------DSELLP 212

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
             +    A    E   +  K I  + KD T  ++Q+
Sbjct: 213 AKTAIGIAQGNKELKALLDKGIEAMHKDGTYAEIQK 248


>gi|282917763|ref|ZP_06325513.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus D139]
 gi|282318048|gb|EFB48408.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus subsp. aureus D139]
          Length = 259

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 13/213 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVMIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +      + R D    D  +    K       
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201


>gi|119871871|ref|YP_929878.1| extracellular solute-binding protein [Pyrobaculum islandicum DSM
           4184]
 gi|119673279|gb|ABL87535.1| extracellular solute-binding protein, family 3 [Pyrobaculum
           islandicum DSM 4184]
          Length = 270

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 77/235 (32%), Gaps = 12/235 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  IKKRG L  G +     +  V  +G   G D+D  R ++ ++     +++   +  
Sbjct: 40  SLDLIKKRGKLIVGTSADWPPYEYV-ESGKIVGIDIDIARRIADSLG---VQLEIRDMKF 95

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                A++   +D +  +   T  RE    + F      D    ++ K   I SV  L G
Sbjct: 96  SALIEAVRKGDVDFVIADMAITPEREK--QVLFSIPYQVDSSTVVVKKGTQIRSVEDLRG 153

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            +I VQ GT  E          N             +  A R    DA         A+ 
Sbjct: 154 KTIGVQVGTVQEDWAVRTLG--NYSKIVRYDRVYPYMVEALRKGDVDAIVVGGVVGDAVV 211

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
                  +   +    S    A A+     +    V    Y M+ + E+     N
Sbjct: 212 KRFPEFEKAFSVGVRYS----AVAMPICAYDLKLQVDKVIYDMLQSGEMERLINN 262


>gi|186476289|ref|YP_001857759.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184192748|gb|ACC70713.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 260

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 72/255 (28%), Gaps = 15/255 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++ L+ +   + +  A  L  IK  G LK G       F    A+    GFD
Sbjct: 1   MKSIRSLLLIGLLQVATATAAFAADDLAKIKSAGALKIGTEGTYAPFTYHDASNQLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  RA++  +        ++          L + + D +      T  R       F  
Sbjct: 61  VEIGRAIAQKLGVKAE---FIEGKWDGLIAGLDANRYDAVINEVAVTDAR--KQKYDFSE 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I+      I     L G        +      A            +  +  
Sbjct: 116 PYIVSHAALIVRSDNSSIKGFDDLKGKKSANTLTSNFGKIAAA------HGAEVVPVQGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237
            E      + R DA   D  +    K         +   +    S    A  I +G+ E 
Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAAVETASDSSDHSAVLIRKGNPEL 229

Query: 238 YNIVSWTHYAMVTAE 252
              ++    A + A+
Sbjct: 230 QAAINKAL-AEIKAD 243


>gi|330876939|gb|EGH11088.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 218

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 16/222 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       + L         + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSAVALCL------AAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G ++    L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKKGAGFTADKASLKGKTVGYEQGTIQEAYAKAALDKAGVSTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           +++ A   + R DA   D+       L +   +++ +   I 
Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPID 207


>gi|325266777|ref|ZP_08133450.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Kingella denitrificans ATCC 33394]
 gi|324981779|gb|EGC17418.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Kingella denitrificans ATCC 33394]
          Length = 272

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 86/266 (32%), Gaps = 21/266 (7%)

Query: 4   DFFVSILCLIILFFTSFS-------------TNASILGDIKKRGFLKCGINTGLVGFAEV 50
            +  +I+    L  T+                  S          L+  +N     F  +
Sbjct: 5   KWLSTIVSCAALALTACGGQSSGTAPAANAEAGGSSASAPASGKVLRVAMNAEFAPFESL 64

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            A    +GFDVD   A++ A      ++++        F AL    +D++      T  R
Sbjct: 65  DAQQKIEGFDVDLMNAMAKAGG---FQVEFQHKPWDSLFPALAQGDVDVVMSAVTITDDR 121

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNM 169
           + ++   F    Y   Q  ++   K +++++ +   + +    G T +      F A   
Sbjct: 122 KETM--DFSEPYYQINQVVLVAPGKKVANINDVRSLSKVGAVTGHTGDFAAQKIFGA--T 177

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 F+ +  +         DA   D + +      N+     ++     +      A
Sbjct: 178 SETIARFKTLPLMLKEVENGGVDAGISDSAVVANYVKNNEGKGFTMVQVPDFTVEHYGIA 237

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +G+ E  N ++     +  + E  
Sbjct: 238 VRKGNQELLNRLNAALKQVRDSGEYK 263


>gi|184156275|ref|YP_001844615.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum IFO 3956]
 gi|260662493|ref|ZP_05863388.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
 gi|183227619|dbj|BAG28135.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum IFO 3956]
 gi|260553184|gb|EEX26127.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
          Length = 266

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 75/255 (29%), Gaps = 23/255 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANG 54
           M K    +S++   ++   + +          +     +G L  G+      ++    NG
Sbjct: 1   MKKWMKRLSVVAASLVAMVALAACGKSSSSSSEPQLVTKGTLTVGLEGTYAPYSYR-ENG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  R L+  +      ++++P         + SK+ D+   +   T  R+   
Sbjct: 60  KLTGFEVDLARDLAKKMGYK---VKFVPTKWDSLIAGVGSKKFDVAINDIAMTPERQK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +     IM      I S+  + G  I    GT     +             
Sbjct: 115 SYLFSTPYIYSKSALIMKSDNTTIKSIDDIKGKKIAAATGTANAQNVK------KFGGET 168

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAI 230
           +            R  R +A      A       +   ++        SK P   +   +
Sbjct: 169 VSSTDFSTAMELVRQGRAEAALNSKEAFL-YYQKSTGATDLKYQEVPSSKIPVQKIGVLM 227

Query: 231 IQGDTEWYNIVSWTH 245
            + +      V+   
Sbjct: 228 AKNNKGLQTKVNKAL 242


>gi|298346992|ref|YP_003719679.1| amino acid ABC transporter ATP-binding protein [Mobiluncus curtisii
           ATCC 43063]
 gi|298237053|gb|ADI68185.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii ATCC 43063]
          Length = 275

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 70/245 (28%), Gaps = 12/245 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKR--GFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62
           F     L      + +   +   ++ K        G +     +       G++ GFD+D
Sbjct: 13  FALAFSLAGCGGAASNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKTGEYTGFDMD 72

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++     +   ++  P++   + + L S  +D L          +      +    
Sbjct: 73  LATEVAKR---NHWTLEKKPIDWDSKDMQLSSGSVDCLWNGFTMNGREDK---YTWSKPY 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKYHPIVFERVE 180
             +   F+      +   + L+G ++ VQA ++    L D                    
Sbjct: 127 VDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFKTLNKVPDYN 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               +  A   DA   D+        T  +   + I+   +           G+    + 
Sbjct: 187 NAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFKLGNKALRDQ 245

Query: 241 VSWTH 245
           V  T 
Sbjct: 246 VQTTL 250


>gi|259909374|ref|YP_002649730.1| Putative amino acid ABC transporter, substrate binding protein
           [Erwinia pyrifoliae Ep1/96]
 gi|224964996|emb|CAX56524.1| Putative amino acid ABC transporter, substrate binding protein
           [Erwinia pyrifoliae Ep1/96]
 gi|283479446|emb|CAY75362.1| putative ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
          Length = 261

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 14/226 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             A  L DI+KRG L+  +      F  V  +   +G+D+D    L+  +     K+Q +
Sbjct: 21  ARADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLV 77

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+ +  R   LQ+ ++D++  +      RE    + F         G    ++  + S +
Sbjct: 78  PVTSANRVPYLQTDKVDLVISSLGKNPEREKV--IDFSRAYAPFFLGVFGPQQGTLKSAA 135

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +LSG S+ V  G   ++ L               +E      +AY + +          +
Sbjct: 136 ELSGKSVGVTRGAVEDMVLTSVVPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVV 192

Query: 202 YALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A+   N    P    +L D     P    I +G+      V    
Sbjct: 193 AAIARQNADKAPLAQFMLKDS----PCFIGIKKGEPALKAKVDALI 234


>gi|26991172|ref|NP_746597.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida KT2440]
 gi|24986217|gb|AAN70061.1|AE016645_7 basic amino acid ABC transporter, periplasmic basic amino
           acid-binding protein [Pseudomonas putida KT2440]
 gi|313497723|gb|ADR59089.1| Cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida BIRD-1]
          Length = 261

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +    S +              LK GI      FA  + +G   GFD
Sbjct: 1   MKKLALLGALALSVFSLVSQAAEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    +K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +S     L G  I VQ G+  +    +   A       + +   
Sbjct: 106 RYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    + +         A+ +GD
Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
               + ++    A+
Sbjct: 224 KANVDRINAAIDAI 237


>gi|319941414|ref|ZP_08015742.1| hypothetical protein HMPREF9464_00961 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805034|gb|EFW01864.1| hypothetical protein HMPREF9464_00961 [Sutterella wadsworthensis
           3_1_45B]
          Length = 251

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 77/232 (33%), Gaps = 14/232 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
              + R  L+ G       F  +      + GFD+D  RA+      D   +Q L +   
Sbjct: 21  AAAQARDLLRVGTEPTFAPFEFLDTQTKDYTGFDMDLIRAVGQKAGFD---VQILNMGFD 77

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLS 144
               AL +  +D+++     T  R+    + F    Y  G   ++H+       +   L 
Sbjct: 78  ALIPALMTGNVDVVAAGVSITPERQK--RVDFTTPYYTSGLSMLIHRTDAEKFKTFDDLK 135

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              + VQ GTT      D   A         F    E      +H   A   D   L   
Sbjct: 136 NQRLAVQIGTTGADKAKDIQGAK-----VSSFNTTSEAFMDLLSHNASAVVLDRPVLAYY 190

Query: 205 KLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                + ++ + +P  I         + +G+T   + ++  +  +  + E+ 
Sbjct: 191 LKNQPKAAQQLTIPPYIADAEEFGFCVKKGNTALLDKLNKAYAELKASGEVD 242


>gi|314934022|ref|ZP_07841387.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus caprae C87]
 gi|313654172|gb|EFS17929.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus caprae C87]
          Length = 485

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 91/286 (31%), Gaps = 30/286 (10%)

Query: 1   MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50
           MYK   + I+  ++L            +   S    IK+RG L+ G++            
Sbjct: 1   MYKIIKILIVITLLLGSAITYINPIVSAEEDSNWNKIKQRGELRVGLSADYAPLEFEKIK 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               D+ G D++  + ++     +  K++ + +       AL++ +ID++      T  R
Sbjct: 61  NGKTDYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDVIISGMTTTPER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           +    + F           ++ K        +   +G  I  Q GT  E    +  K   
Sbjct: 118 KK--EVDFTEPYMMTNNVMLVKKSDKNKYKDLKDFTGKKIAAQKGTDQEKIAHNEIK--- 172

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                    R+ E   A ++ +      +     A    N    E   +     K P   
Sbjct: 173 -DSQVSSLNRLPESILALKSGKVVGTIVEKPVGEAYLKQNPE-LEFADVKFNEEKKPTCI 230

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           A+ +        ++ T           +  KN+     +    D+Q
Sbjct: 231 AVPKNSPILLKHLNQTID--------EVNNKNLIDKYMNQAAQDMQ 268


>gi|146306132|ref|YP_001186597.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
 gi|145574333|gb|ABP83865.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 254

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 81/254 (31%), Gaps = 26/254 (10%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               +LCL  +      T           G L+  +      F E+ A G+  GF+VD  
Sbjct: 1   MLRMLLCLFAVLLAQPGTA----------GPLRVAMEGQFPPFEELDAQGNLVGFNVDIA 50

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL   +  +    ++      +   AL + + D++  +   T  R     + F      
Sbjct: 51  NALCQRMQRECELQRF---AWDDLIPALDAGRADLILASMSITAARAE--RVDFTARYAQ 105

Query: 125 DGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               F   K    + + +  +++G  + VQ GTT E  L   F  H      + +    +
Sbjct: 106 TPAFFFARKGHINQMLITPRRIAGKRVGVQQGTTYERFLEARFAEH---VQLLRYPSAAQ 162

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-----ISKSPLAPAIIQGDTE 236
              A      D    D  + Y   L  +   +   +                A+ +GD E
Sbjct: 163 AYRALAGGELDLVLDDAVSGYFGFLLTELGRDFEQVGGPVVAPQFFGQGQGIAVRKGDDE 222

Query: 237 WYNIVSWTHYAMVT 250
               +     A++ 
Sbjct: 223 LREQLDRALAAILA 236


>gi|57234794|ref|YP_181164.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dehalococcoides ethenogenes 195]
 gi|57225242|gb|AAW40299.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dehalococcoides ethenogenes 195]
          Length = 260

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 81/261 (31%), Gaps = 27/261 (10%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASIL-------GDIKKRGFLKCGINTGLVGFAEVK 51
           M +     +S++    L F+   ++             I+    +    +     F  V 
Sbjct: 1   MKRLSTILMSLILSGALLFSGCQSSTDDTDDNDDSTAKIQ----VTVVTDATWPPFEYVN 56

Query: 52  ANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
                 +GFD+D  +A++        ++ +  +        L + Q  +   +      R
Sbjct: 57  EQTHAIEGFDIDLMKAIAEK---GNLEVTFQNVAWDALLAGLATGQYKVAISSITINAER 113

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
                  F    +  GQ   + K    I S + L+G  +  Q GTT  +       A   
Sbjct: 114 AE--KWLFSDPYFNAGQMVCVQKNNTTILSHNDLTGKKVAAQTGTTGFIEAQKIEGA--- 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 ++ +          + DA   D     A+   N  P +   +    +      +
Sbjct: 169 --TVKSYDEIGLAFQDLMNGQIDAVICDTP--VAIDYVNANPDKIKKVGTAFTDEFYGIS 224

Query: 230 IIQGDTEWYNIVSWTHYAMVT 250
           + +G TE    ++    A++ 
Sbjct: 225 VAKGQTEILARINQGLAAVIA 245


>gi|148547400|ref|YP_001267502.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148511458|gb|ABQ78318.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 250

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V A+    GFDVD   AL   +  +      +  + +    AL +
Sbjct: 23  TLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153
           ++ D +  +   T  R     +AF    Y       + K   I S      G ++  Q+ 
Sbjct: 80  RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T  +   D +          ++  ++E +A   A R D    D   L+     N     
Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGDCC 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++     +K+  A A+ + D      ++    
Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228


>gi|87122518|ref|ZP_01078397.1| probable periplasmic binding protein [Marinomonas sp. MED121]
 gi|86162160|gb|EAQ63446.1| probable periplasmic binding protein [Marinomonas sp. MED121]
          Length = 251

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 74/234 (31%), Gaps = 19/234 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    S L L     +     A           ++         F  + + G  +GFDV
Sbjct: 4   KKLALGSALVLGAALTSVSGIAAD---------KVRLATEGAWAPFNFIDSAGKPQGFDV 54

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  D    + +  +       L+ ++ D +  +   T  R     + F   
Sbjct: 55  DVAWALCAKMKAD---CEVVTQDWDGLIPGLKVRKFDAIIASMSITEERLKV--VDFTNK 109

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y  G  F+  K     +++ L G  I  Q  T     L D F           ++  + 
Sbjct: 110 YYSGGLRFLGLKG-EAFNIADLKGKVIGAQRATLGAQYLEDNFADL---ATLKFYDNQDN 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGD 234
           +     A R D    D    +    T+    +     D   K   +A A+ +GD
Sbjct: 166 VYLDLVAGRLDVVLSDELPTFDWLKTSGNGDKFEFKGDAFLKEDNIAIAVRKGD 219


>gi|312882265|ref|ZP_07742011.1| prephrenate dehydratase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370109|gb|EFP97615.1| prephrenate dehydratase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 258

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  FV  LCLI +   + +   S L  I   G L+ G        +        +KGF
Sbjct: 1   MRKSLFVLGLCLISIMQVAHAQ--SRLQSILDNGVLRVGTTGDWNPMSVKDPTTNRYKGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D +S +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITADKYD-ISGSASLNMSRAKVAGYSQA 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
                             S  S      + V A   T  E  +  +F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLTNFSDWSDFDKPEVRVAATLGTVQEKMVKSFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V +  +   +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVAKFKQ-LAVVPVQKLRKPTPIAMLMPQDDQVW 229

Query: 238 YNIVS 242
            N V+
Sbjct: 230 INYVN 234


>gi|268603208|ref|ZP_06137375.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae PID1]
 gi|268587339|gb|EEZ52015.1| amino acid permease substrate-binding protein [Neisseria
           gonorrhoeae PID1]
          Length = 275

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQAAISGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   + H    I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|330897281|gb|EGH28700.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. japonica str. M301072PT]
 gi|330939546|gb|EGH42869.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. pisi str. 1704B]
          Length = 258

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 79/246 (32%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     I  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +  +       P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222

Query: 234 DTEWYN 239
           D    +
Sbjct: 223 DKANLD 228


>gi|325663782|ref|ZP_08152183.1| hypothetical protein HMPREF0490_02924 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331087299|ref|ZP_08336368.1| hypothetical protein HMPREF0987_02671 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325470115|gb|EGC73349.1| hypothetical protein HMPREF0490_02924 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330408390|gb|EGG87861.1| hypothetical protein HMPREF0987_02671 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 259

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 92/267 (34%), Gaps = 20/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       IL    +  +  +       +  K   L  G   G   +  +K N +  G D
Sbjct: 1   MKIKKVAGILLAGTMMISMAACGGK--EEGAKSEKLIVGTEAGFAPYEYMKGN-EVVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++  +  +   ++   ++      A+QS ++D ++     +  RE    + F  
Sbjct: 58  MDIAKAIADEMGKE---LEIKNMDFDGALAAVQSGKVDFVAAGVSISPEREE--AMDFSN 112

Query: 121 ITYFDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                 +  +++K+    +        S L G  + VQ G   ++ ++   K +      
Sbjct: 113 EYVNSTEVIVVNKENPAVTPAGEELAGSDLDGKVVAVQQGNIADIWVS--NKDNCNPKEV 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             + +  +     +  + D    D      L   ND       L   + +   A A+ +G
Sbjct: 171 KRYTKFAQAAEDLKNGKIDCIVMDQYPAEELVAAND---TLTTLDGTLFEDKYAIAVKKG 227

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKN 260
           + E  + ++     +V   ++     N
Sbjct: 228 NKELLDEINKVIDKLVEEGKIEEFTAN 254


>gi|238753377|ref|ZP_04614740.1| Glutamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473]
 gi|238708330|gb|EEQ00685.1| Glutamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473]
          Length = 238

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +  I L F   S  A           L    +T  V F   + +  + GFDVD   A++ 
Sbjct: 1   MAAITLAFAVSSHAAD---------KLIVATDTAFVPFEFKQGD-KYVGFDVDLWAAIAK 50

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +  D       P++      ALQ+K +D+       T  R+    + F    Y  G   
Sbjct: 51  ELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLV 105

Query: 130 IMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           ++      I   + L G  + V++GT +     DY KA+        F  ++        
Sbjct: 106 MVKTTNNDIKGEADLKGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGT 161

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            R DA   D   +     T     +   + D I       A  QG +E    V+     +
Sbjct: 162 GRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPQG-SELRVKVNAALKTL 219

Query: 249 VT 250
             
Sbjct: 220 KE 221


>gi|46579089|ref|YP_009897.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|46448502|gb|AAS95156.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232934|gb|ADP85788.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 273

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M       +  L+ +   S +           S++    KRG L+ G +T  V +A    
Sbjct: 1   MRSIIMTLLGVLMAISVASAADRPLRDQLAEDSVIEQALKRGTLRVGFST-FVPWAMQDK 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G + GF+VD    L+  +      ++ +P        AL + + D++        +R  
Sbjct: 60  SGAFVGFEVDVATRLAQDLG---LNLELVPTKWSGIIPALLTGKFDVIIGGMSVKPVR-- 114

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           SL + F     +     +  K     + S+       + V A T +   LA   K    K
Sbjct: 115 SLKVNFTIPYDYASISVMASKSAAAGLKSLDDFDNPEVVVVARTGSTAALA--AKKRFPK 172

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                F+          + R  A            L N      +     ++  P+A A+
Sbjct: 173 ARLRYFDDEGPAIQEVLSGRAHALVSSDPLPRFEVLANPD-RLFMPEGKPLALEPVAFAV 231

Query: 231 IQGDTEWYNIVSW 243
            + D +  N++  
Sbjct: 232 RKSDPDTLNVLDN 244


>gi|317130816|ref|YP_004097098.1| extracellular solute-binding protein family 3 [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475764|gb|ADU32367.1| extracellular solute-binding protein family 3 [Bacillus
           cellulosilyticus DSM 2522]
          Length = 246

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 83/249 (33%), Gaps = 28/249 (11%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57
           M K    F+ ++  I+L     S N                 +T  V F  +    G+  
Sbjct: 1   MKKMSGLFLGLIVAIVLLSACGSEN------------YTVATDTNYVPFEFLDTETGEMV 48

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D    ++  +  +   I    +        +++ + DI       T   + +    
Sbjct: 49  GFDIDLINEVADRVGFE---IDLEVVEFDGILTGMETGRYDIGIAGATITE--DRAELFD 103

Query: 118 FRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G    +    + I S+  + G ++  +A TT+E  L +     N      +F
Sbjct: 104 FSDPYYDAGLILAVRADEEEIQSIDDVDGKTVATRAATTSETYLME-----NTDADISLF 158

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             +        A R DA   D+       + ++   E   + D+++         + D+E
Sbjct: 159 PDIVNAYQDLVAGRVDAVIYDLP-NVVYYIESEALGEMKTVGDVLTGEQYGIMFPK-DSE 216

Query: 237 WYNIVSWTH 245
               V+   
Sbjct: 217 LREEVNEAL 225


>gi|221201411|ref|ZP_03574450.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           multivorans CGD2M]
 gi|221208033|ref|ZP_03581039.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           multivorans CGD2]
 gi|221214030|ref|ZP_03587003.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           multivorans CGD1]
 gi|221166207|gb|EED98680.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           multivorans CGD1]
 gi|221172218|gb|EEE04659.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           multivorans CGD2]
 gi|221178679|gb|EEE11087.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           multivorans CGD2M]
          Length = 257

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 23  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KAKCVWVENDFDGLIPALQ 79

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G+  +   L G  + V  
Sbjct: 80  ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQSLKGKRVGVLQ 137

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     L+  +  
Sbjct: 138 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 195

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 196 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 234


>gi|296110461|ref|YP_003620842.1| amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU
           11154]
 gi|295831992|gb|ADG39873.1| amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU
           11154]
          Length = 491

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 113/353 (32%), Gaps = 51/353 (14%)

Query: 1   MYKDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49
           M K+    ++ +I+L           S + +      IK+RG L  G++     F     
Sbjct: 5   MMKNIATLVMSIILLVPLLVSLAPQVSAAESDPAYTKIKERGVLVVGLSADYAPFEFHAT 64

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V       GF+V   + ++  +      +Q   +       A+Q+ +ID++    + T  
Sbjct: 65  VNGRDQIVGFEVSMAKQIAKDLGVK---LQIKEMGFDGLVGAVQTGKIDVIISGINATPE 121

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKA 166
           RE    + F        Q  ++ KK   S        S   +  Q  TT E  + +    
Sbjct: 122 REKV--VDFSKSYLSPKQTVLILKKNATSFTQDVKSFSNKKVGAQRQTTQETFVQNNMP- 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-P 225
                  +  ++V ++ +   A +      +     A        +  VI P        
Sbjct: 179 ---DSKLVSLQKVPDLVSQLSAGKISGVVLNDPISKAYAQQ--NKALQVIYPKPNEGEGA 233

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGI--TQKNINQVSKDTTNPDVQRFL------ 277
           ++ A+ +      + ++     +V++ +L     + N    +K +               
Sbjct: 234 VSVAMPKNSPVLKSKINHAIDDIVSSGKLKAYQKEANTLMFAKQSFWAKYGNLFIKGTLI 293

Query: 278 ----------GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
                            +     L+ ++   I++ +GN   ++   +   + L
Sbjct: 294 TLALAAIAVVVGVVLGTLLALFKLSPNF---ILKAVGN---IYVEYI-RGTPL 339


>gi|294636991|ref|ZP_06715313.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Edwardsiella tarda ATCC 23685]
 gi|291089819|gb|EFE22380.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Edwardsiella tarda ATCC 23685]
          Length = 244

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+    + F++ +              ++   +     F  + AN +  GFD
Sbjct: 1   MKKLLVCAIVAA--MSFSAQAAEN-----------IRFASSATYPPFESLDANNNIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R+  +   F  
Sbjct: 48  IDLAKALCQEM---KANCTFSNQAFDSLITALKFKRYDAVISGMDITPERQKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K     S++ + G  + ++ GTT +  L +           + ++  +
Sbjct: 103 PYYANSAIIIAQKG-KYHSMADMKGLRVGMENGTTHQKYLQEKHPE----IKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + +      N +       +         L  A+  GD    
Sbjct: 158 NAILDLKSGRIDGVFGDTAVVNEWLKNNPQLASVGEHVTDPHYFGIGLGIAVRPGDKALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 AQLNQALAAI 227


>gi|167569242|ref|ZP_02362116.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia oklahomensis C6786]
          Length = 258

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 77/222 (34%), Gaps = 15/222 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G++     F     +G+  GFDVD  + +   I     K  + P +      AL+
Sbjct: 23  KTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NVKCVWTPQDLDGIIPALK 79

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           +K+ D++  +   T  R     + F    Y      I      +  SV  L G  + V+ 
Sbjct: 80  AKKFDVIVSSLTVTAKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKHVGVEQ 137

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T E     +++        + ++  +++ A   + R DA   D        L   R  
Sbjct: 138 GSTQETFAKAHWEPKG--VTVVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTPRGK 195

Query: 213 EHVILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAM 248
                     K P       A  + + D +  + +     AM
Sbjct: 196 GFAWAG-PAVKDPKTLGDGTAMGLRKEDADLKDAIDRALAAM 236


>gi|241204562|ref|YP_002975658.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240858452|gb|ACS56119.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 262

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 11/223 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L DI KRG L+  + T    F+ V A G+  G  V+    ++  +    + + +   +
Sbjct: 23  GTLDDIAKRGELRVAVQTQGPPFSLVDAAGERTGSSVELAELMAKEMGVKITFLDF---D 79

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143
                 AL S + D+L  +   TL R   + +AF     + G           ++     
Sbjct: 80  WDGLIPALLSGKADLLVADMTPTLAR--GMKVAFTKPYMYTGSTVFTKAGGKFNTTGDCK 137

Query: 144 -SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
             G  I V  G T E      F    +K           +  A    + D    D+SA+ 
Sbjct: 138 AKGTKIAVLLGATGEKEAKAAFPDAEIKS---YKGGGPLLLDAVNNGQADCGVNDVSAVK 194

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    S   I+PD++SK PLA A    + +    ++   
Sbjct: 195 GQSTAYPAGS-FTIMPDMLSKEPLAFATRYDEPDLLIWMNQFL 236


>gi|21284065|ref|NP_647153.1| hypothetical protein MW2336 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49487196|ref|YP_044417.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57650957|ref|YP_187215.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87162197|ref|YP_494994.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88196339|ref|YP_501161.1| hypothetical protein SAOUHSC_02699 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151222525|ref|YP_001333347.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|161510605|ref|YP_001576264.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221141308|ref|ZP_03565801.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253730087|ref|ZP_04864252.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|258451281|ref|ZP_05699314.1| extracellular solute-binding protein family 3 [Staphylococcus
           aureus A5948]
 gi|262048822|ref|ZP_06021703.1| hypothetical protein SAD30_0669 [Staphylococcus aureus D30]
 gi|262051566|ref|ZP_06023787.1| hypothetical protein SA930_1334 [Staphylococcus aureus 930918-3]
 gi|282920399|ref|ZP_06328122.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A9765]
 gi|284025434|ref|ZP_06379832.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|294848956|ref|ZP_06789701.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A9754]
 gi|297209766|ref|ZP_06926162.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300910778|ref|ZP_07128228.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304379612|ref|ZP_07362345.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|21205508|dbj|BAB96201.1| MW2336 [Staphylococcus aureus subsp. aureus MW2]
 gi|49245639|emb|CAG44118.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57285143|gb|AAW37237.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87128171|gb|ABD22685.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87203897|gb|ABD31707.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150375325|dbj|BAF68585.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|160369414|gb|ABX30385.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253726174|gb|EES94903.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257861073|gb|EEV83888.1| extracellular solute-binding protein family 3 [Staphylococcus
           aureus A5948]
 gi|259160550|gb|EEW45573.1| hypothetical protein SA930_1334 [Staphylococcus aureus 930918-3]
 gi|259163080|gb|EEW47641.1| hypothetical protein SAD30_0669 [Staphylococcus aureus D30]
 gi|269941997|emb|CBI50409.1| extracellular solute-binding lipoprotein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282594345|gb|EFB99331.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A9765]
 gi|294824335|gb|EFG40759.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A9754]
 gi|296885439|gb|EFH24376.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300887758|gb|EFK82953.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302334043|gb|ADL24236.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302752285|gb|ADL66462.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304341788|gb|EFM07694.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315197388|gb|EFU27725.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139120|gb|EFW31002.1| bacterial extracellular solute-binding protein, family 3
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142503|gb|EFW34312.1| bacterial extracellular solute-binding protein, family 3
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329315100|gb|AEB89513.1| Amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329726709|gb|EGG63170.1| ABC transporter, substrate-binding protein, family 3
           [Staphylococcus aureus subsp. aureus 21189]
 gi|329730189|gb|EGG66579.1| ABC transporter, substrate-binding protein, family 3
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 259

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVMIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R D    D  +    K          I  +            + D E   
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQ 228

Query: 240 IVSWTHYAMVTAEELG 255
             +     +    EL 
Sbjct: 229 KFNDGLKKIEENGELA 244


>gi|328477583|gb|EGF47645.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus MTCC 5462]
          Length = 486

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 101/319 (31%), Gaps = 28/319 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M + +   +  +  L  T S +   S L     +     G +     F     +  + G 
Sbjct: 1   MKRVWKWCVAGVAALILTLSLAMPVSTLA---AKKTYVIGTDVTYAPFEFADKHNQYVGI 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A++ A   +  ++   PL       AL++ QID +      T  R+    +   
Sbjct: 58  DIDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--S 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y       + K  G++ +  L G  + ++ GT                +  + F+  
Sbjct: 113 DPYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDS 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--- 236
             +          A   D   L     T     +  +       S    A  +G ++   
Sbjct: 171 NNMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELD 227

Query: 237 ------WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                    + +   YA + A+ LG   +   + +   T    + FLG+ + +      G
Sbjct: 228 QKFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNG 287

Query: 291 LTKDWTYRIIR-----HMG 304
           L +     I+       +G
Sbjct: 288 LRETMVVTIVAIFFATAVG 306


>gi|126665672|ref|ZP_01736653.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Marinobacter sp. ELB17]
 gi|126629606|gb|EBA00223.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Marinobacter sp. ELB17]
          Length = 291

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 25/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +   L +L  +           ++    ++   +     F     NG+  GF+
Sbjct: 43  MKKILIAASCALAMLTGS-----------VQAEDSIRIAFDVPYEPFEYKDENGELTGFE 91

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+   +    +K +++          L +++ D +  +   T  R     + F  
Sbjct: 92  VELAEAMCEEM---NAKCEFVIQAWDGMIPGLLARKFDAIMSSMSVTPERAE--RVLFSK 146

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G+   +   I    +  +   S+ VQ GTT +  + +         +   +  
Sbjct: 147 PYYNTPGGWFAAEGFDIDVTDMDAMKDKSVGVQRGTTMDTFVTENMT---GVVNIKRYNT 203

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEW 237
            +++       R D    D         T       + + + +     +  A+ + DT+ 
Sbjct: 204 ADDMVLDLEGQRLDVVFVDYPVGE---QTIKNKDGFIEIGESVKLGEGVGVAMRKRDTDL 260

Query: 238 YNIVSWTHYAMVT 250
              V+     +  
Sbjct: 261 AERVNKALDTLKE 273


>gi|260904004|ref|ZP_05912326.1| extracellular solute-binding protein [Brevibacterium linens BL2]
          Length = 271

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 92/253 (36%), Gaps = 20/253 (7%)

Query: 1   MYKDFFVSILCL-IILFFTSFSTNASILGD------IKKRGFLKCGINTGLVGFAEVKAN 53
           M +   ++I+    +L  ++                + + G L    +     F  V   
Sbjct: 1   MKRRSSLAIVAAGAMLALSACGGGGDSEAKSDSGVPLVEDGKLTVCSDIPYEPFEFVDG- 59

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  GFD+D  +A +  +  +   +      A +   AL + Q DI       T  R+  
Sbjct: 60  GENVGFDMDLAQATAEDLKVE-LNVITTAFEAIQSGSALDTAQCDIALSGMSITDDRKT- 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F      D  G ++ KK GI  +  + G  + VQ  TT E    D          P
Sbjct: 118 -KMDFSEPYLKDNLGLMVTKKSGIKGIDDVKGQKVGVQQATTGETYAKD------HGATP 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + FE    +  A +  + D+  G+IS +     ++D+      + +  +   L   + +G
Sbjct: 171 VQFEDSGLMTQAIQTGQVDSVIGNISIISTAVESDDK---LEFVEEYDTGEVLGAGVKKG 227

Query: 234 DTEWYNIVSWTHY 246
           + E  +  + T  
Sbjct: 228 NKELLDAFASTMK 240


>gi|223043619|ref|ZP_03613664.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14]
 gi|222443107|gb|EEE49207.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14]
          Length = 485

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 30/286 (10%)

Query: 1   MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50
           MYK   + I+  ++L          + +   S    IK+RG L+ G++            
Sbjct: 1   MYKIIKILIVITLLLGSAITYINPIASAEEDSNWNKIKQRGELRVGLSADYAPLEFEKIK 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               D+ G D++  + +   + D+  K++ + +       AL++ +ID++      T  R
Sbjct: 61  NGKTDYAGVDIELAKKI---VKDNHLKLKIINMQFDSLLGALKTGKIDVIISGMTTTPER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           +    + F           ++ K        +   +G  I  Q GT  E    +  K   
Sbjct: 118 KK--EVDFTEPYMMTNNVMLVKKSDKNKYKDLKDFTGKKIAAQKGTDQEKIAHNEIK--- 172

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                    R+ E   A ++ +      +     A    N    E   +     K P   
Sbjct: 173 -DSQVSSLNRLPESILALKSGKVVGTIVEKPVGEAYLKQNPE-LEFANVKFNEEKKPTCI 230

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           A+ +        ++ T           +  KN+     +    D+Q
Sbjct: 231 AVPKNSPILLKHLNQTID--------EVNNKNLIDKYMNQAAQDMQ 268


>gi|149376080|ref|ZP_01893846.1| extracellular solute-binding protein, family 3 [Marinobacter
           algicola DG893]
 gi|149359717|gb|EDM48175.1| extracellular solute-binding protein, family 3 [Marinobacter
           algicola DG893]
          Length = 250

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 80/247 (32%), Gaps = 22/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + + L ++   + +   +          L+   +     F     NG+  GF+
Sbjct: 1   MRKLIVAASVALTMMAGVAHAQERN----------LRIAFDVPYEPFEYKDENGELTGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+   +    +  +++          L +++ D++  +   T  R     + F  
Sbjct: 51  VELAEAMCEEM---NANCEFVIQAWDGMIPGLLARKFDLIMSSMSITPERAE--RVLFSE 105

Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G+   +     ++ ++ + G ++ VQ GTT +  + +             +  
Sbjct: 106 PYYNTPGGWFGPESFNTDVTDMAAMEGMTVGVQRGTTMDTFVTEEM---GGVVTIKRYTT 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +++       R D    D       +    +     +   +     +  A+ + D E  
Sbjct: 163 ADDMVLDLEGQRLDVVFVDYP--VGEQTVLSKDGFKEVGEPVKLGQGVGVAMRKRDEELA 220

Query: 239 NIVSWTH 245
             V+   
Sbjct: 221 QEVNEAL 227


>gi|313636727|gb|EFS02389.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri
           FSL S4-171]
          Length = 192

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 23/200 (11%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K+F   +  + ++F           +       L  I+++G L  G++     +    
Sbjct: 1   MQKNFLQKLAAIALIFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +       GFDV     ++  +     K+    +N      +L++ +ID++      T 
Sbjct: 61  TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R+    + F     F  Q  ++ K      +SV+  +G  +  Q  TT E    +    
Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173

Query: 167 HNMKYHPIVFERVEEIDAAY 186
             +    +  ++V ++    
Sbjct: 174 --VGSDVVSLQKVPDLLLNL 191


>gi|312959434|ref|ZP_07773951.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311286151|gb|EFQ64715.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 259

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 88/251 (35%), Gaps = 18/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K         + +     +         K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKALLTLSALALCMAAGVATA--------KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +     K +++  +       L++ + D +  +   T +RE    + F  
Sbjct: 53  IDLGNAICAEL---KVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREK--AIDFSS 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  K  G S+   L G S+  + GT  E           +      +   +
Sbjct: 108 ELFSGPTSLVFKKGAGYSTPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTK--AYANQD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEW 237
           ++ A   + R DA   D+       L +   + +     + D +  S  A  I +G+TE 
Sbjct: 166 QVYADLTSGRLDASVQDMLQAELGFLKSPAGAGYEVSAPIDDPLLPSKTAIGIKKGNTEL 225

Query: 238 YNIVSWTHYAM 248
             ++     A+
Sbjct: 226 KALLDKGIKAL 236


>gi|331647964|ref|ZP_08349056.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli M605]
 gi|330912132|gb|EGH40642.1| histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Escherichia coli AA86]
 gi|331043688|gb|EGI15826.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Escherichia coli M605]
          Length = 260

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKNEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|312139386|ref|YP_004006722.1| glutamate abc transporter substrate binding lipoprotein glub
           [Rhodococcus equi 103S]
 gi|325672733|ref|ZP_08152429.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Rhodococcus equi ATCC 33707]
 gi|311888725|emb|CBH48037.1| putative glutamate ABC transporter substrate binding lipoprotein
           GluB [Rhodococcus equi 103S]
 gi|325556610|gb|EGD26276.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Rhodococcus equi ATCC 33707]
          Length = 281

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 81/242 (33%), Gaps = 11/242 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                S    +L D  + G L  G      G A  + +    GFDV+  + +++ +    
Sbjct: 26  SACGSSEPRDVLADAAE-GQLTIGTKYDQPGLALREPDKTMTGFDVEVAKYIANYLGVPE 84

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S I +    + +R   +++ ++D +      T  R+    + F    Y  GQ  ++    
Sbjct: 85  SGITWREAPSAQRENLIKNGEVDFVVGTYSITDNRKKV--IDFAGPYYVAGQSLLVRADD 142

Query: 136 GISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              + ++    G  +C  +G+T    +A  +           F+       A    + DA
Sbjct: 143 DSITGAESLQGGKKLCSVSGSTPAQKIAKSYP----GVQLQQFDSYSSCVEALHRGKVDA 198

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            T D   L         P E  +     +       + +G+TE    ++     M+    
Sbjct: 199 LTTDDIILAGYAAQY--PGEFKLAGQPFTTELYGVGLPKGETEARMKINDAIEDMIATGA 256

Query: 254 LG 255
             
Sbjct: 257 WQ 258


>gi|295102634|emb|CBL00179.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 281

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 34/260 (13%)

Query: 1   MYKDFFVSI----LCLIILFFTSFSTNA-----------------SILGDIKKRGFLKCG 39
           M +  F+S+        +L     S+N                  + L  I+  G L   
Sbjct: 1   MKRRTFISLMSVMAAAGVLSLAGCSSNTSVSTASSIAASASAAAANKLETIQSNGKLVIA 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           +      ++    +    G+DV+  RA++  +  +P    Y+  +    F  L + + D+
Sbjct: 61  LEGAWQPWSFHDESDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRYDL 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTEL 158
           +    + T  R  +    F     +      + K    I S   L+G +      +T   
Sbjct: 118 VCNGVEVTEERAKT--YDFTTPYGYIHTALAVRKDNEDIKSFEDLAGKTTANSLASTYME 175

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            LA+ + A          + +EE      A R DA      + Y     +    +  ++ 
Sbjct: 176 -LAESYGA-----TVQGIDTLEETIQLLTAGRIDATLNANVSFYDYLNVHPDA-DFKLVA 228

Query: 219 DIISKSPLAPAIIQGDTEWY 238
                S +A  I++ +   +
Sbjct: 229 QTEDASHVAIPIVKSEDSSF 248


>gi|257126582|ref|YP_003164696.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
 gi|257050521|gb|ACV39705.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
          Length = 251

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 19/237 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + ++ +   S S +         +     GI+T    F   K +  + G D
Sbjct: 5   MLKMIMLVTVFMLTMACGSKSADG--------KKKYTIGIDTSFPPFEYKKDS-KYTGID 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+      +  ++++ P++      ALQS Q+D +      T  R+    + F  
Sbjct: 56  IELLQAIGK---LEGFEVEFKPMDFGGLIPALQSGQLDGVIAGASITEERKK--SVDFSD 110

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I +V  L G  + V+ GT       D  K    K    VFE  
Sbjct: 111 PYYESGLVALVNKGNSTIKTVKDLEGKRLVVKNGTAGAKFAEDNLK---GKATIRVFEDS 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                A   ++ DA   D   +      N   +  +    + +       + +G+ +
Sbjct: 168 ASTLKAVENNQADAAFEDYPVIAYTIKVNPNLNVKIGTEKLTNNE-YGFMVKKGENK 223


>gi|156933097|ref|YP_001437013.1| hypothetical protein ESA_00907 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531351|gb|ABU76177.1| hypothetical protein ESA_00907 [Cronobacter sakazakii ATCC BAA-894]
          Length = 264

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 79/223 (35%), Gaps = 14/223 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G +     F    A G+  GFD+D  + L   I    ++  +          +L++K
Sbjct: 32  LRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---QTQCSFTEQPLDALIPSLKAK 88

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  ++  L G  + V  GT
Sbjct: 89  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKGSPIQPTLESLKGKRVGVLQGT 146

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++         + ++  + I +   A R DA   D  A     L       +
Sbjct: 147 TQETYGNEHWAPKG--VEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKGY 204

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252
                 I    L        I + D E    ++   +A + A+
Sbjct: 205 QFGGPSIKDEKLFGVGTGMGIRKEDNELREALNKA-FADMRAD 246


>gi|237794467|ref|YP_002862019.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Ba4 str.
           657]
 gi|229260832|gb|ACQ51865.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Ba4 str.
           657]
          Length = 274

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 10/250 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGFD 60
           K  F+S+  ++ L  T  +  A    +IK+    +K G +     F  +   +   +GF+
Sbjct: 7   KKIFLSMSLVVALGVT-LTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGFE 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +       P    +   +       L + +ID ++     T   +      F  
Sbjct: 66  IDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSK 120

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFER 178
              + G      K    I S+  L G ++  Q GT    ++ DY   +         +  
Sbjct: 121 PYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNTGEDIKTKQYNS 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +       R DA   D  A       +    +    P    ++         + E  
Sbjct: 181 FSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEKI 240

Query: 239 NIVSWTHYAM 248
             ++     M
Sbjct: 241 EKINKALDDM 250


>gi|284048018|ref|YP_003398357.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
 gi|283952239|gb|ADB47042.1| extracellular solute-binding protein family 3 [Acidaminococcus
           fermentans DSM 20731]
          Length = 261

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 76/261 (29%), Gaps = 16/261 (6%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M K   F  IL  +++   +        +      ++  L  G N     F      +G 
Sbjct: 1   MKKMKMFAGILAGLMMCVAAAGCGGGSGTSEKKPAEKKELVVGTNPSFAPFEFTDKKDGK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D   AL+     +   +    +       +L+S  ID+       T  R+    
Sbjct: 61  VMGFDIDLINALARKAGYEK--VTIKSIAFDGLIPSLESGNIDVSITGMSITDARK--QK 116

Query: 116 LAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F    Y  G    +    + I  +  L G +I VQ GTT          A        
Sbjct: 117 VNFTDPYYESGLMAVVKKDNEAIKGLDDLKGKTIAVQLGTTGAKYAETIEGAK-----VK 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+  +      +    DA   D+  L    L          +           A  + +
Sbjct: 172 TFDSSDLACLELKNGGADAVISDLPVLQ-YFLKQGGSQYAKSVGTPKKGDFYGIATAKKN 230

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
               + ++     M    E  
Sbjct: 231 KNLCDKLNKALAEMKKDGEYQ 251


>gi|307155069|ref|YP_003890453.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7822]
 gi|306985297|gb|ADN17178.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7822]
          Length = 511

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 63/217 (29%), Gaps = 14/217 (6%)

Query: 31  KKRGF-LKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +  G             F       G+  GFD++  +A+         KI +  L     
Sbjct: 36  QDTGKAFTVATEPAFPPFEMTDQKTGELTGFDLELMKAIGQEAG---LKITFESLPFDGI 92

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
             ALQ+  +         T  R  +  L+F    +  G    + K    I S   L G  
Sbjct: 93  IPALQAGTVKAAISGMTITPER--AQTLSFSRPYFKAGLAIAVRKDNNSIKSFDDLKGKK 150

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ GTT     A    A        +F+            + DA   D          
Sbjct: 151 IAVQIGTTGAKQAAQIEGA-----EISIFDSAVLALQELVNGKVDAVVNDAPVTLYAIKK 205

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              P    ++ +++++     A+ +       I    
Sbjct: 206 AGLPGV-KVVGELLTEEYYGIALPKNSPYLKQINDGI 241


>gi|194015852|ref|ZP_03054467.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
 gi|194012207|gb|EDW21774.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
          Length = 264

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 73/236 (30%), Gaps = 14/236 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K + V +   ++    +         + K    LK G       FA    NG   GF
Sbjct: 1   MKNKKWLVVLFAAMLAVLAACGGGNQG--EGKDEKVLKVGATGQSYPFAYKD-NGKLVGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+   A++  +      + +           L S ++D +S     T  R+      F 
Sbjct: 58  DVEVTEAIAKKLGYK---LDWQLSEFSGLMGQLTSGKLDTVSNQVAVTDERK--QTFNFT 112

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   I+ K    I  +  L G ++    G+     L        +  +   +E 
Sbjct: 113 DTYAYAGTQIIVKKDNNDIKGLDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYET 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            + +       R DAY    S L A       P    I+ + I    +     +  
Sbjct: 171 QDGVLNEVANGRVDAYVNGRSVLLAQIEKTGLP--LKIVGNPIVYEEVGYPFAKDK 224


>gi|59800816|ref|YP_207528.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae FA 1090]
 gi|293399480|ref|ZP_06643633.1| polar amino acid transport system substrate-binding protein
           [Neisseria gonorrhoeae F62]
 gi|59717711|gb|AAW89116.1| putative ABC transporter, periplasmic binding protein, amino acid
           [Neisseria gonorrhoeae FA 1090]
 gi|291610049|gb|EFF39171.1| polar amino acid transport system substrate-binding protein
           [Neisseria gonorrhoeae F62]
          Length = 275

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   + H    I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|157165684|ref|YP_001467256.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
           [Campylobacter concisus 13826]
 gi|112801956|gb|EAT99300.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Campylobacter concisus 13826]
          Length = 238

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 75/250 (30%), Gaps = 30/250 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + +   + L                    LK G       F  +  N    GFD
Sbjct: 1   MKKIFALLLTAFVALCA----------------NELKFGTAANYPPFEYIDENNKITGFD 44

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +S          + + ++      AL++ +I+ +      T   +    + F  
Sbjct: 45  IDLIDEISKRAG---FSYKIINMSFDGLIPALKAGKINGIISAMSATP--DRLKSIDFTK 99

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     ++  K    + +  +L+G  + VQ GT  EL       A       +  E  
Sbjct: 100 PYYLTENIYLKKKGNDALKAKEELAGKKVGVQQGTIQELAANAINGAK-----VVPSEDT 154

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWY 238
             +    +  + DA   D S  Y        P       ++      + A  +   +E  
Sbjct: 155 VPLIMGLKVGKFDAVILDSSIGYGFI--KKNPEVEAFFKEVDGSEGFSIAFDKNKQSELI 212

Query: 239 NIVSWTHYAM 248
             ++     M
Sbjct: 213 AKINQILDEM 222


>gi|296103155|ref|YP_003613301.1| arginine-binding periplasmic protein 2 precursor [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057614|gb|ADF62352.1| arginine-binding periplasmic protein 2 precursor [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 243

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 69/218 (31%), Gaps = 16/218 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++     F  + A+    GFD+D  +AL   +  D     +          +L+ 
Sbjct: 22  KINFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R   +   F    Y +    I  K     S  +L G  I ++ GT
Sbjct: 79  KKYDAVISGMDITPERSKQVA--FTDPYYANSAVVIAKKG-AYKSFDELKGKRIGMENGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L D           + ++  +      +  R D   GD + +         P   
Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLG 189

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248
                +         L  A+   +      ++    A+
Sbjct: 190 TATEKVTDPQYFGTGLGIAVRPDNKALLAKLNGALKAI 227


>gi|50122458|ref|YP_051625.1| amino acid-binding protein [Pectobacterium atrosepticum SCRI1043]
 gi|49612984|emb|CAG76435.1| amino acid-binding protein [Pectobacterium atrosepticum SCRI1043]
          Length = 261

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 11/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K     +  L     ++   + S             G       F    A    +GFD
Sbjct: 1   MFKKLL-CVGALFATALSTTVLSTSTFA---AEPTYVVGSGGTYRPFEFENAQKQLEGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +   I+ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 57  IDIIKAIAKA---ENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   I S++ L    + V   +T ++ ++D    +        F+   
Sbjct: 112 PYFPAEQSIVIPKGSTIDSIAALKDHKVGVVNSSTADIVVSDVLGKN--STSIKRFDNTP 169

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+  +     T+     +++      +     A+ +G+ +    
Sbjct: 170 LMLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDKLREK 229

Query: 241 VSWTHY 246
           ++    
Sbjct: 230 INAGLK 235


>gi|16763173|ref|NP_458790.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29144652|ref|NP_807994.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213052287|ref|ZP_03345165.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213580415|ref|ZP_03362241.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213850086|ref|ZP_03380984.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25296350|pir||AB1048 probable arginine-binding periplasmic protein [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16505481|emb|CAD06831.1| probable arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29140291|gb|AAO71854.1| probable arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 239

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           R +   GD   + A+        ++ I+ +  S           A+ +G+      ++  
Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219

Query: 245 HYAMVTAEELG 255
              +  + E  
Sbjct: 220 LDKVKASPEYA 230


>gi|325277061|ref|ZP_08142719.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
 gi|324097811|gb|EGB95999.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
          Length = 273

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 81/260 (31%), Gaps = 23/260 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V    L++L   S +   + L  ++ R  +   +      F+ +       GFDVD  +A
Sbjct: 6   VLGAGLVLLATASQALAGTTLERVESRKEMVNVLMESYPPFSFLNDQNQLDGFDVDVAKA 65

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +      ++    +         S + DI   +   +  R       F    Y   
Sbjct: 66  VADKLGVK---LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVEYYASP 120

Query: 127 QGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------V 175
               +  K + I     L G  + + + ++ E  L         +   I           
Sbjct: 121 AVIVVNAKDERIHGAKDLDGRKVGLTSASSYESYLNKNLVIEGKEDQKIDYPFDFVQIAP 180

Query: 176 FERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           ++               R DA   +   L   +    +     +    + + P + AI +
Sbjct: 181 YDTDNVAFQDLGLGAGVRLDAILTN---LVTAQPRLTQDKRFKLAGAPLYEEPNSVAIEK 237

Query: 233 GDTEWYNIVSWTHYAMVTAE 252
           GD EW   V    +A + A+
Sbjct: 238 GDPEWDAKVRQV-FAELKAD 256


>gi|260661991|ref|ZP_05862887.1| glutamate ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
 gi|260553374|gb|EEX26266.1| glutamate ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
          Length = 276

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 29/270 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           K +   ++ + ++   + S         S + DIKK+G L  G +     +         
Sbjct: 4   KKWLKMLMVVALVVMGAVSLAGCSSSSDSSVQDIKKKGELVVGTSADYPPYEFQIVKNGK 63

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G+DV     ++  I      ++++ +        LQ+K+ D++     WT  R   
Sbjct: 64  QQIVGYDVKLAHLIAKNIGVKK--VRFVNIAFPSLISELQNKKFDMVMAGMVWTKERAK- 120

Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             ++F    +  GQ  ++ K  +   S +S L GA++  Q  +  E              
Sbjct: 121 -AVSFSSTYHHGGQVLLVSKANENKYSGISALKGATLGAQQSSEQET-----IGKSLSGV 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SP 225
             +    +  +    +A   D      ++  A     + P+++ I  +I  K       P
Sbjct: 175 KLVTESSITTLSQEVKAGTLDGLILAQTS--ADAFVAEHPNDYAIAKNITFKISAKTSDP 232

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + + D     +V+ T      + EL 
Sbjct: 233 -RVVVRKSDKALLKVVNKTIKDAKKSGELD 261


>gi|50086540|ref|YP_048050.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Acinetobacter sp. ADP1]
 gi|49532514|emb|CAG70228.1| putative amino acid-binding protein (ABC superfamily, peri_bind)
           [Acinetobacter sp. ADP1]
          Length = 305

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 8/187 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                    NA  L DIKK G +K  I      F  V  +   +G+D+D  + ++  +  
Sbjct: 59  SALMLPTFANADALADIKKAGVIKIAIPQDFPPFGTVGTDLKAQGYDIDVAKLIAQDLGV 118

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
               +Q +P+ +  R   L +K++D++  +      RE    + F         G    K
Sbjct: 119 K---LQLVPVTSANRIPYLTTKKVDLVISSLGKNPEREKV--IDFVGPYAPFYNGVFGQK 173

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              + S + L+G +I V  G+  +L L+    +         FE      +A+ + + + 
Sbjct: 174 NVSVKSAADLAGKTIAVTRGSIEDLELSKVAPS---STTIKRFEDNNSTVSAFYSGQVNL 230

Query: 194 YTGDISA 200
                  
Sbjct: 231 IATGNVV 237


>gi|158314289|ref|YP_001506797.1| extracellular solute-binding protein [Frankia sp. EAN1pec]
 gi|158109694|gb|ABW11891.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec]
          Length = 385

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 87/224 (38%), Gaps = 13/224 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
               S +  I++ G+L+ G+ T    F  +     + +GFD      ++ AI  DP  +Q
Sbjct: 91  GARGSRIEAIRRYGYLRVGVTTVAPPFGSMNWRTMEVEGFDPAIAGEIAGAILGDPELVQ 150

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +  ++ ++R   +    +DI++     T  R+  +   F  + Y      ++    G+ +
Sbjct: 151 FRAVDTRDREALVADGTVDIVTGTMTMTCARKERVR--FSGVYYEAAMRILVPAGAGLRT 208

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V  L+G  +C   G+T+   +A+  +        +    + +  AA +    DA   D +
Sbjct: 209 VGDLAGRPVCSSQGSTSFEKVANLVRGPGRPVA-VNRVGIVDCLAALQRGEVDAVATDDT 267

Query: 200 ALYALKLTND-----RPSEHVILPDIISK----SPLAPAIIQGD 234
            L  ++  +       P     +     +     P   AI + D
Sbjct: 268 ILAGMRAEDATVTVLGPEAFDGVLGPAGRAGLDEPYGVAIGRTD 311


>gi|258623970|ref|ZP_05718923.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio mimicus VM603]
 gi|258583764|gb|EEW08560.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio mimicus VM603]
          Length = 243

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     ++F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALVDQLNAALEAVKENGEYA 234


>gi|120556215|ref|YP_960566.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8]
 gi|120326064|gb|ABM20379.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 248

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 80/248 (32%), Gaps = 24/248 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +   L ++  T+ + +            L+   +     F     NG+  GF+
Sbjct: 1   MKKLIVAASCALAMMTGTAQAQD------------LRIAFDVPYEPFEYRDDNGELTGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+   +    +  +++          L +++ D++  +   T  R     + F  
Sbjct: 49  VELATAMCEEL---QANCEFVIQAWDGMIPGLLARKFDLIMSSMSITPERAE--RVLFSE 103

Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y    G+   +     ++ +  +   ++ VQ GTT +  + +         +   +  
Sbjct: 104 PYYITPGGWFGPESFNTDVTDMDAMKDKTVGVQRGTTMDTYVTENM---GGVVNIKRYTT 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E++       R D    D       +   ++     +   I     +  A+ + D +  
Sbjct: 161 AEDMVLDLEGQRLDVVFVDYP--VGEQTVLNKEGYKEVGEPIKLGEGVGVAMRKRDAKLA 218

Query: 239 NIVSWTHY 246
             V+    
Sbjct: 219 EDVNAALK 226


>gi|257455733|ref|ZP_05620961.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus
           SK60]
 gi|257446861|gb|EEV21876.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus
           SK60]
          Length = 268

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 83/261 (31%), Gaps = 21/261 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKR---------GFLKCGINTGLVGFAEVKANG 54
              ++ +C + +  T+    A                    ++         F    A+G
Sbjct: 11  KLALATVCAVSMGLTACQKPAEKTEGAAASQPAASASTGKKIRIATEGAYKPFNYTNADG 70

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+DVD  +A+ +    D    + +  +       L +++ D ++     T  R    
Sbjct: 71  TLGGYDVDVAKAVCAQAKLD---CEIVAQDWDGILPGLMARKYDAVAAGMSITPERSA-- 125

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F    + +   ++  K     +   +SG  I  Q  TT    L D     N      
Sbjct: 126 QVDFTTPYFKNTMVWVAAKGGK-FNPQAISGLKIGGQRSTTMAQYLQDKLSKTN---EIK 181

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +++  +      ++ R D+   +          N      ++  ++ +   +A AI +GD
Sbjct: 182 LYDNYDNAYIDLKSGRIDSVLSEKVTASEWLKQNSN--YQIVGSEMDNGDNIAMAIRKGD 239

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
                       A+ +  EL 
Sbjct: 240 P-LKAEFDKALDALQSNGELA 259


>gi|94986574|ref|YP_594507.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94730823|emb|CAJ54185.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 249

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 19/252 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M + F F+SIL ++ +F ++             +       +        +  +    G+
Sbjct: 1   MLRTFGFLSILTILSIFSSTSIA----------KDIYIVASDATWPPMENLDEHKKVVGY 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D+  A++     +   I+         F AL +  IDI++ +   T  R     + F 
Sbjct: 51  SSDYITAVAKEAGIN---IEIRNTAWDGIFAALNADLIDIIASSVTITDKR-KQKVMDFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y   Q  ++     I S+  L+G  +  Q GT+    L +      +K     ++ +
Sbjct: 107 KPYYNVHQAIVVPNGSPIKSIQDLNGKKVGGQIGTSG---LIETLPKAKVKAIVKTYDEI 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWY 238
                       DA   D              ++H+ +            A+ +G+ E  
Sbjct: 164 GLALEDLSNGSLDAVICDEPVANYFIKQQPEYTDHITIAFITTEIEQYGFAVKKGNKELL 223

Query: 239 NIVSWTHYAMVT 250
             ++    A+  
Sbjct: 224 EKINAGVKAVKE 235


>gi|18309582|ref|NP_561516.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|18144259|dbj|BAB80306.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
          Length = 278

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 30/290 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K+ F     V+++  + L              ++  +  IK+ G L  G++     + 
Sbjct: 1   MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSSDKVAKIKESGKLVVGLSADYAPYE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+D  + ++  +  D   ++   +       ++++  ID+      
Sbjct: 61  FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163
            T   +    + F  I Y   QG +++K     I  +  L G  +  Q G+     +   
Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                      + + V  +    +  + DA   ++    A   +       V    I + 
Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228

Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               A AI +G+ +  + V+ T   +    ++     +  ++       +
Sbjct: 229 EGGSAIAIQKGNKDLVDKVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278


>gi|113477911|ref|YP_723972.1| extracellular solute-binding protein [Trichodesmium erythraeum
           IMS101]
 gi|110168959|gb|ABG53499.1| extracellular solute-binding protein, family 3 [Trichodesmium
           erythraeum IMS101]
          Length = 286

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 84/266 (31%), Gaps = 20/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   + I   +      F     +A     I +R  +  G+      F     +G W 
Sbjct: 1   MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRN-DGKWT 59

Query: 58  GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           G+ +D   AL+  +     DP +++ +    + R+  + S ++D+       +  RE   
Sbjct: 60  GYCIDIAYALADRLSANQLDPIRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKH 119

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G+ F    +      +  K +    V  +  A++ V   TT E  L   +    +     
Sbjct: 120 GINFSSPFFITATQILAKKGRQEEDVK-VGNATVGVVRNTTNESDLKSAYPLEKIDNK-- 176

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-------LA 227
            +   EE   A        +  D + L       +   E+      I++           
Sbjct: 177 -YLSREEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFITINQENGRPFCAGYG 235

Query: 228 PAIIQGDTE--WYNIVSWTHYAMVTA 251
             +  G+    W   ++        A
Sbjct: 236 FILPGGEDNSSWQRYINDFLAHNKKA 261


>gi|322653448|gb|EFY49778.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|323213182|gb|EFZ97984.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
          Length = 239

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 20/248 (8%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRP--SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           R +   GD++A+      N      +            L  A+ +G+      ++     
Sbjct: 163 RLEGVFGDVAAIGKWLKNNPNYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAALDK 222

Query: 248 MVTAEELG 255
           +  + E  
Sbjct: 223 VKASPEYA 230


>gi|322391787|ref|ZP_08065252.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus peroris ATCC 700780]
 gi|321145267|gb|EFX40663.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus peroris ATCC 700780]
          Length = 481

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 16/226 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +        A       ++       ++    F    ++  + G D
Sbjct: 1   MKKKILACLLILFPILSLGL-VKADT-----EKTKYVIASDSSFAPFVFQDSSNQYTGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +   I+           A+QS Q D +      T  R+ +    F  
Sbjct: 55  MDLIKAIAEDQGFE---IEITNPGFDAAINAVQSGQADGIIAGMSVTDARKET--FDFSD 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       + +   ISS   L+G ++ V+ GT ++  L +    +  K     F    
Sbjct: 110 SYYTANTILGVKESSTISSYEDLNGKTVGVKNGTASQTFLTENQSKYGYK--IKTFSDAA 167

Query: 181 EIDAAYRAHRCDAYTGDISAL---YALKLTNDRPSEHVILPDIISK 223
            +  +      DA   D   +    +       P     + +    
Sbjct: 168 SMYDSLNTGSIDAVMDDEPVIKYSISQGQKLKTPIAGTPIGETAFA 213


>gi|299783710|gb|ADJ41708.1| Amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum CECT 5716]
          Length = 266

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 75/255 (29%), Gaps = 23/255 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANG 54
           M K    +S++   ++   + +          +     +G L  G+      ++    NG
Sbjct: 1   MKKWMKRLSVVAASLVAMVALAACGKSSSSSSEPQLVTKGTLTVGLEGTYAPYSYR-ENG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  R L+  +      ++++P         + SK+ D+   +   T  R+   
Sbjct: 60  KLTGFEVDLARDLAKKMGYK---VKFVPTKWDSLIAGVGSKKFDVAINDIAMTPERQK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +     IM      I S+  + G  I    GT     +             
Sbjct: 115 SYLFSTPYIYSKSALIMKSDNTTIKSIDDIKGKKIAAATGTANAQNV------KKFGGET 168

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAI 230
           +            R  R +A      A       +   ++        SK P   +   +
Sbjct: 169 VSSTDFSTAMELVRQGRAEAALNSKEAFL-YYQKSTGATDLKYQEVPSSKIPGQKIGVLM 227

Query: 231 IQGDTEWYNIVSWTH 245
            + +      V+   
Sbjct: 228 AKNNKGLQTKVNKAL 242


>gi|312958494|ref|ZP_07773014.1| amino acid ABC transporter [Pseudomonas fluorescens WH6]
 gi|311287037|gb|EFQ65598.1| amino acid ABC transporter [Pseudomonas fluorescens WH6]
          Length = 265

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 91/250 (36%), Gaps = 15/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +   +L  +     + +  A  + D  KRG LK G++   + F      GD  GF+
Sbjct: 1   MKK-YLSMLLLGVTALVAATAAQAGAIDDAVKRGTLKVGMDPTYMPFEMTDKRGDIIGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ ++      ++ +         A  + + D++      T  R  +L L F  
Sbjct: 60  VDILKAMAKSMGVK---LELVSTGYDGIIPAFLTGKFDMIGSGMTLTQER--NLRLNFSE 114

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176
                GQ  ++ K+    I S   L+     + +   TT E+                 +
Sbjct: 115 PFIVVGQTLLIRKELEGTIKSYKDLNDEKYRLTSKLGTTGEMVAKKLIAKAKYHG----Y 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  +E        + DA+  D       +         V L +  +  PLA  + +GD +
Sbjct: 171 DNEQEGVLDVVNGKADAFVYDAPYNVVAEKKVGNGK-LVFLDEPFTFEPLAFGLKKGDYD 229

Query: 237 WYNIVSWTHY 246
             N ++   +
Sbjct: 230 SINFINNFLH 239


>gi|153941473|ref|YP_001390529.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|152937369|gb|ABS42867.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           Langeland]
 gi|295318610|gb|ADF98987.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           230613]
          Length = 274

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 10/253 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59
           +K  F+S+  L++    + +  A    +IK+    +K G +     F  +   +   +GF
Sbjct: 6   FKKIFLSM-SLVVTLGVALTACAQNNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    +       P    +   +       L + +ID ++     T   +      F 
Sbjct: 65  EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177
               + G      K    I S+  L G ++  Q GT    ++ DY   +         + 
Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +       R DA   D  A       +    +    P    ++         + E 
Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239

Query: 238 YNIVSWTHYAMVT 250
              ++     M  
Sbjct: 240 IEKINKALDDMKN 252


>gi|56416145|ref|YP_153220.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161617624|ref|YP_001591589.1| hypothetical protein SPAB_05484 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197365071|ref|YP_002144708.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56130402|gb|AAV79908.1| arginine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161366988|gb|ABX70756.1| hypothetical protein SPAB_05484 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197096548|emb|CAR62158.1| probable arginine-binding periplasmic protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 239

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECTFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           R +   GD   + A+        ++ I+ +  S           A+ +G+      ++  
Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219

Query: 245 HYAMVTAEELG 255
              +  + E  
Sbjct: 220 LDKVKASPEYA 230


>gi|283853409|ref|ZP_06370655.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
 gi|283571222|gb|EFC19236.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           FW1012B]
          Length = 247

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 76/251 (30%), Gaps = 25/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++++ + +    S +              +    +        V A+ +  G+ 
Sbjct: 1   MVKKLALALVIVAMAASASLA------------KTIVFATDATWPPMEFVNADKEITGYA 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+ +A            ++  +     F  L S + + +  +   T  R+    + F  
Sbjct: 49  IDYMKAAGKEAG---FTAEFKAVAWDGIFAGLASGKYNAICSSVSITDERK--NTMDFST 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++  K     V  + G ++  Q  TT    +       +  Y  +      
Sbjct: 104 PYFKVRQALVVPVKSTAKCVDDMKGKTLGAQISTTGHFAIKKMEGIKDKSYDEVGL---- 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEW 237
                    R D    D        L N++    + +    +         A+ +G+ E 
Sbjct: 160 -AFEDLYNGRIDGVVCDDPVAAQYALQNEKYKGSLKIACIVEAGEDEFYGIAVQKGNKED 218

Query: 238 YNIVSWTHYAM 248
             +++    A+
Sbjct: 219 LELINKGIEAV 229


>gi|269214285|ref|ZP_06158475.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria lactamica ATCC 23970]
 gi|269210116|gb|EEZ76571.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria lactamica ATCC 23970]
          Length = 275

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                     + S++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGEGGSASSSAPAQSAGESGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|66046800|ref|YP_236641.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257507|gb|AAY38603.1| Lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas
           syringae pv. syringae B728a]
 gi|330972269|gb|EGH72335.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 258

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 77/245 (31%), Gaps = 23/245 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +  S+++L G  I VQ GT  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTTVSDSLAELKGKKIGVQRGTIHERFAREVLAPQG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D    +  +                A+ +GD
Sbjct: 164 NEIYLDISAGRLDGTIADATLLQDGFLKTDAGKGYAFVGPSFFDPKYFGDGIGIAVRKGD 223

Query: 235 TEWYN 239
               +
Sbjct: 224 KANLD 228


>gi|324995219|gb|EGC27131.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK678]
          Length = 287

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +   +   ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|225620105|ref|YP_002721362.1| family 3 extracellular solute-binding protein [Brachyspira
           hyodysenteriae WA1]
 gi|225214924|gb|ACN83658.1| extracellular solute-binding protein, family 3 [Brachyspira
           hyodysenteriae WA1]
          Length = 275

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 79/228 (34%), Gaps = 9/228 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              + L  +K  G L  G++           NG+  GFD+D    ++S +      ++  
Sbjct: 35  QEDNSLQRVKDSGKLVLGLDDTFAPMGFRDENGEIVGFDIDLAHEVASRMG---VVLETK 91

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140
            ++  +    L +++ID+L    +    R++ +   F      +    + H     I+S+
Sbjct: 92  SIDWGKSSSILTNREIDVLWNGVNINNERKVYM--NFSKPYLNNMLIIVKHNDDETINSI 149

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G  + VQ G   E        +         ++   +     + ++ DA+  D   
Sbjct: 150 DNLAGKIVGVQKGGNYEQIANHPIMSK--IKELRQYDENIKAFTDLQLNKLDAFITDD-V 206

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                +T  +    V+     +    A  + + D +    +      M
Sbjct: 207 FAQYYITEKKAPFTVVHNTPFTDGLYAIGVNKSDKKLLEEIDRILDEM 254


>gi|206564613|ref|YP_002235376.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198040653|emb|CAR56639.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 267

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 87/254 (34%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + S          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLLVTALAFAPLASFAQDTST---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + + + L+G  I +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPVGSKLLPTAASLAGKRIGIDQGTTQEAYAKAEWATRG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++ + +     A  I +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIVAI 238


>gi|134295216|ref|YP_001118951.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134138373|gb|ABO54116.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 264

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G + +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITEQRK--HAVAFTDPIYTIPNQLIAKQGSGLLPTPQALKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     L+  +  
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241


>gi|330982767|gb|EGH80870.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 244

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 25/241 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     I  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +  +       P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222

Query: 234 D 234
           D
Sbjct: 223 D 223


>gi|311695809|gb|ADP98682.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [marine bacterium HP15]
          Length = 252

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 21/252 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M   +  ++   + L   + + +A           L+   +   V F  +    G+  GF
Sbjct: 1   MSTKWLKTVSASLALTVAAGTVSAET---------LRVVTDPSFVPFEMMDQETGEMIGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  R ++     +   I    ++      ALQ+  +DI       T  RE    + F 
Sbjct: 52  DMEIIREVADRAGFE---IDLNTMDFNGIIPALQTGNVDIAIAGITITEEREEI--VDFS 106

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++ +    +S    L G  I  + G+T+   L     A         +  
Sbjct: 107 DPYYDSGLRILVREGNDDVSEFDDLEGKKIGTKIGSTSYDYLVKNLDA---DDGVTPYPG 163

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             ++  A  +   DA   D               +   +  +        A+  G +EW 
Sbjct: 164 SSDMYMALMSRAIDAVFYDAP-NVGYFARTKGEGKVTTVGPLYEGQQYGIALKSG-SEWV 221

Query: 239 NIVSWTHYAMVT 250
           + V+    AM  
Sbjct: 222 DDVNEALAAMKE 233


>gi|307726172|ref|YP_003909385.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Burkholderia sp. CCGE1003]
 gi|307586697|gb|ADN60094.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1003]
          Length = 260

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    ++G   GFD+D    + + +    +K  ++  +      
Sbjct: 23  KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI  +   L G ++ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTAESLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEPKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   +    +        + + DT+    V      ++
Sbjct: 196 RGAGFDFVGKNLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240


>gi|90419462|ref|ZP_01227372.1| putative solute-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336399|gb|EAS50140.1| putative solute-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 259

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 79/238 (33%), Gaps = 18/238 (7%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
                 L   +  + A           L  G N G V +     N +  GF+VD  + ++
Sbjct: 3   AAATTALLLVAGPSLAET---------LTAGANIGNVPWEFQDENSEIVGFEVDLLKKVA 53

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +  D   +    +     F A+QS +ID+   +   T  R     ++F    Y   Q 
Sbjct: 54  DRLGYDE--VDIQNVPFNGLFSAVQSGRIDVAISSITITDER--LQSVSFAQPYYDSDQS 109

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
                  GI+    L G ++ V  G+T ++   +      +      +E +        A
Sbjct: 110 LSTRADSGIAGSGDLKGKTVGVDTGSTGDIYSTERESEWGLAG-ISRYEGLSPAMLDLAA 168

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            R DAY  DI A+           E  ++  + +    +    + D+E     +    
Sbjct: 169 GRIDAYVSDIPAVAYY---LKDKPEMKVVERLATGEQYSMMFAK-DSELAGKANEVLT 222


>gi|269963236|ref|ZP_06177570.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832041|gb|EEZ86166.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 273

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 20/256 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M   K    ++L L I   +  +        +  IK+RG L+ G++T  V +A     G+
Sbjct: 1   MKLFKATITALLGLAIALPSLANEEEAATPNVDQIKERGTLRVGMST-FVPWAMRNKQGE 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D  + L++       K++++P        AL +K+ D++      T  R  S  
Sbjct: 60  LIGFEIDVAKRLAADTG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKS 114

Query: 116 LAFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
           + F       G     +K+        S        I  + G  T     + F       
Sbjct: 115 VLFTEPYSHSGVQVAANKELAAGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK--- 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F+   +           A            + +      +   + +SK   A A+ 
Sbjct: 172 -ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKHADKL-FIPFTERLSKGNEAFAVR 229

Query: 232 QGDTEWYNIVSWTHYA 247
            G+ +     +    A
Sbjct: 230 LGEEDKKAFFNEWIEA 245


>gi|330817961|ref|YP_004361666.1| Cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia gladioli BSR3]
 gi|327370354|gb|AEA61710.1| Cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia gladioli BSR3]
          Length = 258

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F  V  NGD  GFDVD  R + + I     +  ++  +      
Sbjct: 20  KEWKTVRIGVDASYPPFESVAKNGDIVGFDVDLTREICTRI---AVRCTWVAQDLDGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           AL++++ D++  +   T  R     + F    Y      I       + +V+ L G ++ 
Sbjct: 77  ALKARKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLLPTVASLKGKTVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++        + ++  +++ A     R DA   D        L   
Sbjct: 135 VEQGSTQETYAKTYWETQG--VTIVPYQNQDQVYADLGTGRLDAALQDELQADYGFLRTP 192

Query: 210 RPSEH-VILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248
           R        P++     +       + + DT+    ++    AM
Sbjct: 193 RGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAM 236


>gi|300716054|ref|YP_003740857.1| Arginine-binding periplasmic protein 1 [Erwinia billingiae Eb661]
 gi|299061890|emb|CAX59006.1| Arginine-binding periplasmic protein 1 [Erwinia billingiae Eb661]
          Length = 244

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 75/213 (35%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  V ++   +GFDVD   AL   +    +   +          +L+ 
Sbjct: 23  TIRFATEASYPPFEFVDSDNKIQGFDVDLANALCREM---NATCTFTNQAFDSLIPSLKF 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D +    D T  RE    + F    Y +   FI  K   ++SV  L G  + VQ GT
Sbjct: 80  RRFDAVMAGMDITPEREK--QVLFSKAYYDNSALFIAQKG-KVASVDALKGKRVGVQNGT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L +         + + ++  +      +  R DA  GD + +      N    P 
Sbjct: 137 THQKYLTEKM----TGVNAVPYDSYQNAILDLKNGRIDAVFGDTAVVNEWLKQNANLAPV 192

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       + L  A+ QG+ E     +   
Sbjct: 193 GEKVTDKAYFGTGLGIAVRQGNAELQGQFNTAL 225


>gi|291086278|ref|ZP_06355258.2| putative ABC transporter, substrate binding protein [Citrobacter
           youngae ATCC 29220]
 gi|291068723|gb|EFE06832.1| putative ABC transporter, substrate binding protein [Citrobacter
           youngae ATCC 29220]
          Length = 297

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 88/253 (34%), Gaps = 8/253 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            +   +  +++        NA+ L  I+    L  G    L  F+    NG   G+ +  
Sbjct: 17  QWLTLLAGIVVSPTLMAQQNAATLDHIQNSSVLNVGYRQ-LPPFSLTDNNGKVTGYTIAV 75

Query: 64  CRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           C  ++      +      I Y+P+N  ERF AL +++ID+       T   E    ++F 
Sbjct: 76  CNMIADKLRQYLKLSSLTIHYIPVNFGERFSALNTRKIDMDCSV--NTNAPERMSSVSFS 133

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y      I  +K  I S+  L G ++ +   +   L      +  ++    I    +
Sbjct: 134 IDYYTAKMRIIALRKNNIHSIVDLKGRTVSLPGSSKDLLEFNKANREQHLNISTITTTTI 193

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWY 238
                    +   A   D    + L   +++P    +    I +    A  + + D ++ 
Sbjct: 194 NGAFDKMAHNEAAALFLDDVLAWPLIKDSEQPELFSMSAQSIGNDMHYAIMMRKNDPQFV 253

Query: 239 NIVSWTHYAMVTA 251
             V+ T      +
Sbjct: 254 TFVNSTLKDFFAS 266


>gi|271501947|ref|YP_003334973.1| Prephenate dehydratase [Dickeya dadantii Ech586]
 gi|270345502|gb|ACZ78267.1| Prephenate dehydratase [Dickeya dadantii Ech586]
          Length = 255

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + +L    L     ++ AS L  +++RG LK         +  ++A+G ++G D
Sbjct: 1   MKKRFSLMLL----LGLAGSASAASHLDQVQERGVLKVCTTGDYKPYTSLRADGSYEGID 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   ++L+ ++      ++++  + K      QS Q DI       TL R+     +   
Sbjct: 57  IAMAQSLAKSLGVK---VEWVKTSWKTLMPDFQSDQCDIAMGGISVTLERQKKAFFSNTL 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178
                        K    +V+Q++  S+ V      T E  +  +    +     +    
Sbjct: 114 DVDGKIPLVRCDDKDKYQTVAQINQPSVRVIEPAGGTNEAFVHAHLPNAH-----LALHD 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I       + D    D S     +    +         +      A  + + D  W 
Sbjct: 169 NVTIFQQLVDKQADVMITDASEALYQQKRYPQLCAVNPASPMQYGE-KAYMLPRDDMSWK 227

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +   +  E  
Sbjct: 228 LYVDQWLHLSKSTGEYR 244


>gi|254804665|ref|YP_003082886.1| polar amino acid transport system substrate-binding protein
           [Neisseria meningitidis alpha14]
 gi|254668207|emb|CBA04961.1| polar amino acid transport system substrate-binding protein
           [Neisseria meningitidis alpha14]
          Length = 274

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+   A++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTLAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|226313901|ref|YP_002773797.1| L-cystine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226096851|dbj|BAH45293.1| L-cystine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 275

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 72/232 (31%), Gaps = 15/232 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + + ++L  +K    L  G       F     +G   G+DV+    ++  +  +P    +
Sbjct: 39  AASQNLLEKVKAEKKLVIGTEGTYSPFTFHNQSGTLTGYDVEVITEVAKRLGVEP---VF 95

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISS 139
                   F  L SK+ D+++         +      F           + HK    +  
Sbjct: 96  QETQWDAMFAGLDSKRFDVIANQVGI--RPDRQEKYDFSKSYTISRAVLVTHKDNNTVKD 153

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI- 198
              + G     Q+ T+    LA   +A       +  +   +        R D    D  
Sbjct: 154 FKDIKGLKAG-QSMTSNYADLARSHEA-----EIVGVDNFNQAIDLIAQKRVDVVINDNL 207

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           S L  LK   D P    ++       P A    +G TE  + V+     M  
Sbjct: 208 SVLDFLKQKPDTPI--KVVAKNTEGQPTAFMFRKGSTELIDAVNKVLDEMQQ 257


>gi|295103460|emb|CBL01004.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 275

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 35/276 (12%)

Query: 1   MYKDFFVSI----LCLIILFFTSFST---NASI--------LGDIKKRGFLKCGINTGLV 45
           M +  F+S+        +L  T  S+    +S         L  I+K G L   +     
Sbjct: 1   MKRRTFISLMGVMAAAGVLGLTGCSSKDTASSTAGPAPLNKLNSIQKSGKLVVALEGAWQ 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            ++   A+    G+DV+  RA++  +  +P    Y+  +    F  L + + D++    +
Sbjct: 61  PWSYHDASDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRYDMVCNGVE 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164
            T  R  +    F     +      + K    I+S   L G +      +T    LA+ +
Sbjct: 118 VTEERAKTYA--FTTPYGYIHTALAVRKDNTDITSFEDLKGKTTANSLASTYME-LAESY 174

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            A          + +EE      A R DA      + Y     +    +  ++      S
Sbjct: 175 GA-----TVQGIDTLEETIQLLTAGRIDATLNADVSFYDYLNVHPDA-DFKLVAQTAEAS 228

Query: 225 PLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            +A P +   DT + + ++         EEL     
Sbjct: 229 HVAIPVLKSEDTAYLDALNTAI------EELRADGT 258


>gi|325271441|ref|ZP_08137966.1| cationic amino acid ABC transporter periplasmic binding protein
           [Pseudomonas sp. TJI-51]
 gi|324103423|gb|EGC00745.1| cationic amino acid ABC transporter periplasmic binding protein
           [Pseudomonas sp. TJI-51]
          Length = 261

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +    S +              LK GI      FA  + +G   GFD
Sbjct: 1   MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    +K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFTK 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M +   +S     L G  I VQ G+  +    +   A       + +   
Sbjct: 106 RYYLTPARLVMKEGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    + +         A+ +GD
Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
                 ++    A+
Sbjct: 224 DANRERINKAIDAI 237


>gi|296117710|ref|ZP_06836294.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306]
 gi|295969441|gb|EFG82682.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306]
          Length = 292

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 90/282 (31%), Gaps = 26/282 (9%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50
           M +      +I+  + +  +  +            +LG I + G +  G      G    
Sbjct: 1   MSRSITRIAAIIGSVAISGSLLAACGDSGGGDSEGLLGSI-EAGNVTLGTKFDQPGLGLR 59

Query: 51  KANGDWKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           + +G   G DVD       +++     +   I +    + +R   +Q+ ++D+++     
Sbjct: 60  EPDGSMTGLDVDVATYVVNSIAEENGWEEPSIDWREAPSAQRETLIQNGEVDMITATYSI 119

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFK 165
              R  S  + F        Q  ++      IS +  L G  +C   G+T    + +   
Sbjct: 120 NPGR--SESVNFGGPYLLTHQALLLQDGNDEISGLDDLDGKILCSVTGSTPAQKVKEALP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIIS 222
                     ++       A R    DA T D + L      +      V L    +  +
Sbjct: 178 ----TVQLQEYDTYSSCTEALRQGNVDAMTTDATILNGYAAQSPGNFRVVELEQDGEPFT 233

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263
                  + + D E  + ++    AM+           N+ +
Sbjct: 234 NEYYGIGLTKDDEEGTDAINTALQAMIDDGSFDQFISDNLGE 275


>gi|170694557|ref|ZP_02885709.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia graminis C4D1M]
 gi|170140439|gb|EDT08615.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia graminis C4D1M]
          Length = 264

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 101/279 (36%), Gaps = 24/279 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  ++  +   L +    + +  ++   DIK+   ++ G+      F     +G+ +GFD
Sbjct: 1   MKMNWRNTA-ALALFAMATLTAASASAADIKE---VRFGVEASYAPFESKSPSGELQGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +    +K  ++  +      ALQ+++ + ++ +   T  R     + F  
Sbjct: 57  IDVGNAVCAKL---KAKCVWVENSFDGLIPALQARKFNAINSDMTITEQR--RQAIDFTD 111

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K  G+  + + L G  + V  GT  E      +    +    + ++  
Sbjct: 112 PIYTIPNQMIAKKGSGLQPTPASLKGKHVGVLQGTIQETYAKARWAPAGVD--VVPYQTQ 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           ++I A   + R DA   D  A     L   + +        ++   L        I +GD
Sbjct: 170 DQIYADLSSGRLDASFQDAEAASKGFLKKPQGAGFEFAGPAVTDEKLLGAGVGFGIRRGD 229

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
               + ++          EL      I++ +    +  V
Sbjct: 230 KALKDALNQALK------ELKADGT-IDRFAAKYFDVKV 261


>gi|307244569|ref|ZP_07526674.1| bacterial extracellular solute-binding protein, family 3
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492096|gb|EFM64144.1| bacterial extracellular solute-binding protein, family 3
           [Peptostreptococcus stomatis DSM 17678]
          Length = 281

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 89/253 (35%), Gaps = 17/253 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPS 76
              N + L  IKK   L    +     F  +          G D+D  + ++  +  +  
Sbjct: 32  SGGNQTALEQIKKNKKLVVATSPDYPPFEFMVSENGKSKIVGADIDLAQKIADKLGVE-- 89

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135
            ++   ++      ALQ+ ++D++         R+    + F  I +      I++ K  
Sbjct: 90  -LELKAMDFDALLPALQAGKVDMVITGMTPNEKRKK--AVDFSDIYFKGENAVIVNAKDA 146

Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
              +S  QL  A + VQ G+T E  + D  K  N K        V ++ A  +    DA 
Sbjct: 147 GKFTSEDQLKKAKLGVQKGSTQETYVKDNLKVTNYK----ALVAVPDLIADMKNGNIDAV 202

Query: 195 TGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDT-EWYNIVSWTHYAMVTA 251
             +           D  +  E++ L     +  +A AI +GD  +   + +     +  +
Sbjct: 203 VLNSKVAGINVTKYDGIKVVENLKLTSGGDEEAMAVAIKKGDNADLIKLTNEVIKELQDS 262

Query: 252 EELGITQKNINQV 264
            E      N   +
Sbjct: 263 GEYDKILANAVDL 275


>gi|125717448|ref|YP_001034581.1| L-cystine ABC transporter, substrate-binding component, putative
           [Streptococcus sanguinis SK36]
 gi|125497365|gb|ABN44031.1| L-cystine ABC transporter, substrate-binding component, putative
           [Streptococcus sanguinis SK36]
          Length = 275

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 4   KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 64  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 120 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +       ++     + P     I  G  + 
Sbjct: 180 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 238

Query: 238 YNIVSW 243
              V+ 
Sbjct: 239 QKFVNK 244


>gi|226314898|ref|YP_002774794.1| amino acid ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226097848|dbj|BAH46290.1| probable amino acid ABC transporter substrate binding protein
           [Brevibacillus brevis NBRC 100599]
          Length = 267

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 71/213 (33%), Gaps = 8/213 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +     F  ++A+    G D+D   A++ A      KI++        F  L 
Sbjct: 44  KVYVVGTDAAYPPFQMLEAD-KISGHDIDVMNAIAEAGG---FKIEWKNTGWDPLFDGLD 99

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
              +DI   +   T  R+      F    +   Q  ++ +   ++ ++ L G  I VQA 
Sbjct: 100 KGTVDIGISSITITEKRKE--KYDFSDSYFEANQLILVAEDSPVTKLADLKGKKIGVQAA 157

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E  +   F           ++ +      +   R DA  GD   L            
Sbjct: 158 TTGEEVVKKAFGDTYEG--LKGYDDMPSSVDDFFNGRVDAVIGDNGVLSYYVNKVKDKKF 215

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            +I  D   K      + +G+ +  N ++    
Sbjct: 216 KLIKDDSFEKEFYGIIVKKGNADAINKINDGLK 248


>gi|149183273|ref|ZP_01861716.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus
           sp. SG-1]
 gi|148849033|gb|EDL63240.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus
           sp. SG-1]
          Length = 245

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S+   I++ G L  G       F     +G+  GFDV+  R ++S +  +P    +  
Sbjct: 10  EQSLYEQIQENGELLIGTEGTYPPFTFHDESGELTGFDVEIAREVASRLGVEP---VFKE 66

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141
                 F  L S + D+++         +      F           +  K+   ++S  
Sbjct: 67  TQWDAMFEGLNSNRFDMIANQVGI--REDRQEKYDFSIPYIESSAVLVASKENEEVNSFE 124

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G +   Q+ T+    +A+ + A          + + +        R D    D  ++
Sbjct: 125 DIDGLTSA-QSLTSNYKDIAESYGA-----EIQGVDGLAQAIQLVEQDRVDVTINDKLSI 178

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                         I+    + +       +G+ +    V+     M+ 
Sbjct: 179 LDYLQKQKN-VGIEIVATEENAAQSGLMFRKGNEKLVEEVNKALEEMME 226


>gi|251793714|ref|YP_003008444.1| L-cystine-binding protein TcyA [Aggregatibacter aphrophilus NJ8700]
 gi|247535111|gb|ACS98357.1| L-cystine-binding protein TcyA [Aggregatibacter aphrophilus NJ8700]
          Length = 259

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 81/262 (30%), Gaps = 21/262 (8%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K       +L  + L   + +    I   ++K   L  G       F     +G   G
Sbjct: 1   MKKSLLAKTLLLSGLALGIATQAMAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   A++  +      IQ+        +  L +K+ D+++  T      E      +
Sbjct: 61  FDVEVIEAVAQRL---SLTIQFNETQWDSMYAGLNAKRFDLIANQT--NPSPERLKKYLY 115

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +     +  +    I +   L G     Q+ T+    +A    A       IV +
Sbjct: 116 TAPYNYSTAVIVTKEGDDSIKTFEDLKGKK-ATQSLTSNYGKIAKANGA-----ELIVVD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            + +        R +    D  A+             + +     K P   A+++G+   
Sbjct: 170 GLAQALKLITQDRAETTVNDQLAVLDYFKKQPNSGLKIAVK-RDEKVPSGFAVLKGEEPL 228

Query: 238 YNIVSWTHYAMVTAEELGITQK 259
              ++ T       EEL     
Sbjct: 229 VEKINQTL------EELRKDGT 244


>gi|227514072|ref|ZP_03944121.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus fermentum ATCC 14931]
 gi|227087553|gb|EEI22865.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus fermentum ATCC 14931]
          Length = 266

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 77/254 (30%), Gaps = 21/254 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANG 54
           M K    +S++   ++   + +          +     +G L  G+      ++    NG
Sbjct: 1   MKKWMKRLSVVAASLVAMVALAACGKSSSSSSEPQLVTKGTLTVGLEGTYAPYSYR-ENG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  R L+  +      ++++P         + SK+ D+   +   T  R+   
Sbjct: 60  KLTGFEVDLARDLAKKMGYK---VKFVPTKWDSLIAGVGSKKFDVAINDIAMTPERQK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +     IM      I S+  + G  I    GT     +             
Sbjct: 115 SYLFSTPYIYSKSALIMKSDNTTIKSIDDIKGKKIAAATGTANAQNV------KKFGGET 168

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDI-ISKSPLAPAII 231
           +            R  R +A      A  Y  K T     ++  +P   I    +   + 
Sbjct: 169 VSSTDFSTAMELVRQGRAEAALNSKEAFLYYQKSTGTTDLKYQEVPSSKIPVQKIGVLMA 228

Query: 232 QGDTEWYNIVSWTH 245
           + +      V+   
Sbjct: 229 KNNKGLQTKVNKAL 242


>gi|323529956|ref|YP_004232108.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323386958|gb|ADX59048.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 273

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
             L   S + +A  L +I K G ++ G+      F  +  +    G+D+D    +  A+ 
Sbjct: 27  GALTAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVANLIGKAL- 85

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +K++ + +    R   L   + D+L      T  RE    + F              
Sbjct: 86  --NAKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSQPYAPYYLAVFGP 140

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   + + + L+G SI V  GT  +L+++          +   F+      +A+ + +  
Sbjct: 141 KALTVKNAADLAGKSISVARGTLEDLSVSKIAP---PTANIKRFDDPNGAISAFISGQVQ 197

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                      +      P+        +  SP    + + +      +  T 
Sbjct: 198 LMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKIDETI 248


>gi|150402397|ref|YP_001329691.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150033427|gb|ABR65540.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 254

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 89/250 (35%), Gaps = 12/250 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             ++ + +I  F    S+       +   G L  GI   L        NG+ KG+D+D  
Sbjct: 8   VIIASILIITSFSGCISSYGMDSDTV-TPGVLTIGITPSLPPLEYY-ENGELKGYDIDLM 65

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +   P    +   + +    AL + +ID +       +  E    + F      
Sbjct: 66  KEIAYKMGLKPE---FKIYSYEGAQKALLNGEIDCIPSTA---ISPERKEKMDFSRAYVQ 119

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                 + +      +  L+G ++ V   T TE     Y  +     +   +E V+ + +
Sbjct: 120 TYMVIAVFESSSYREIKDLNGKNVAVIKNTYTEDWANFYLGS--TTANIKPYESVDSLMS 177

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              +   DA   D   ++     +    +  ++ + I+    A A+ +G+    + ++  
Sbjct: 178 DVESGNLDAVVTD--QIHMDYYAHKNNLDARMISEKITIIYWAIAVKKGNNGLQDQINDA 235

Query: 245 HYAMVTAEEL 254
            + +   E L
Sbjct: 236 LFELEEDEAL 245


>gi|87121344|ref|ZP_01077234.1| putative periplasmic binding abc transporter protein [Marinomonas
           sp. MED121]
 gi|86163501|gb|EAQ64776.1| putative periplasmic binding abc transporter protein [Marinomonas
           sp. MED121]
          Length = 258

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 94/255 (36%), Gaps = 25/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M     ++ +   ++ F S +  A           +K GI T     F+   A+G++ G+
Sbjct: 1   MKLKASIAYISAFVIGFFSTTLAAQT---------IKVGIATEPYPPFSVPDASGNYSGW 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  +A+ +    D    + +         AL SK+ID+++ +   T  R+    + F 
Sbjct: 52  EIDIAKAICAQAKLD---CEIVATAWDGIIPALLSKKIDVVAASLSITADRKRV--IDFS 106

Query: 120 PITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   I  K    SS  ++L    I +QA +        + K +        ++ 
Sbjct: 107 DKYYQSGASIIGSKNANFSSTPAELDNKIIGLQAASIHV----KFAKKYYPNATIKEYQS 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDIISKSPLAPAIIQG 233
            +E +    + R DA   D   L +   +    +        +  + +    +   + +G
Sbjct: 163 QDEANQDLYSGRIDATQADALTLESFLNSEQGKNCCDLKGMAVNDESLLGEGIGFGLRKG 222

Query: 234 DTEWYNIVSWTHYAM 248
           + E    ++    A+
Sbjct: 223 NPELKEQLNNAIDAI 237


>gi|294789055|ref|ZP_06754295.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Simonsiella muelleri ATCC 29453]
 gi|294483157|gb|EFG30844.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Simonsiella muelleri ATCC 29453]
          Length = 269

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 19/258 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR---------GFLKCGINTGLVGFAE 49
           M   + F VS   + +       ++ +    +              L+ G N     F  
Sbjct: 1   MKLNQWFTVSCAAMALAACGGSQSSGNTAPPVASSANPTATTGEKVLRIGTNAEFAPFES 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           +    + +GFD+D    ++        K+++        F +L +K +D ++     T  
Sbjct: 61  LNEKQEIQGFDIDLLNEMAK---VGHFKVEFKHTPWDGIFASLDNKDVDAVASAVTITDD 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHN 168
           R+ ++   F    Y   Q  ++   K + +V  L     + V +G T +L     F A  
Sbjct: 118 RKKTM--DFSEPYYKITQVVLIPPSKTVKNVDDLKKLPKVGVVSGQTGDLAAQKIFGA-- 173

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
              +   F+ V  +         DA   D + +      N      ++      +     
Sbjct: 174 TSPNIARFDTVTLLTKEVENGGVDAGISDSAVIANYIKNNTNKGFSMVQIPDFQEEHYGF 233

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A+ +GDTE  N+++ +  
Sbjct: 234 AVRKGDTETLNLLNDSLK 251


>gi|161502501|ref|YP_001569613.1| hypothetical protein SARI_00545 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863848|gb|ABX20471.1| hypothetical protein SARI_00545 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L       
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKT 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKEDNELRETLNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|161525288|ref|YP_001580300.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189349974|ref|YP_001945602.1| polar amino acid transporter substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160342717|gb|ABX15803.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189333996|dbj|BAG43066.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 264

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KAKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G+  +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQSLKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     L+  +  
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241


>gi|56697873|ref|YP_168244.1| polar amino acid ABC transporter periplasmic substrate-binding
           protein [Ruegeria pomeroyi DSS-3]
 gi|56679610|gb|AAV96276.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Ruegeria pomeroyi DSS-3]
          Length = 277

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 13/239 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M      + L  + L   + +           I++RG +  G+      +     +G   
Sbjct: 1   MKHLIATTALASLTLAPIAATAAECTNDAWNRIQERGKIVVGVKADYKPWGFRDTDGSII 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G ++D    ++  +  +   ++  P+ A  R   L+  QID++         R   +G+ 
Sbjct: 61  GMEIDMAAEVAKTLGVE---LELTPVVASNRMQFLEQGQIDLMIATMTDRADRREIVGIV 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             P  Y  G   +  K  G SS ++L+G  +C   G      + D + A       + F 
Sbjct: 118 -GPNYYTSGTNILAPKALGFSSWNELNGKPVCGVQGAFYNQIVEDKYGA-----QIVAFA 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E   A R  +C A+  D S++    + +    +  +       SP   A+ +G+  
Sbjct: 172 GAAEARQALRDKKCVAFVYDDSSI-GSAIASGEWEDFEMPLASEDDSPWGLAVPKGEEN 229


>gi|317492511|ref|ZP_07950939.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919503|gb|EFV40834.1| lysine-arginine-ornithine-binding periplasmic protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 247

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 78/247 (31%), Gaps = 22/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  L +    S                L    +T  V F   + +  + GFD
Sbjct: 1   MKSIIKASVAALTLALAMSSHAAE---------KQLIVATDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +          P++       LQ++ +D+       T  R+    + F  
Sbjct: 51  IDLWDAIAKQL---NLSYTLKPMDFSGIIPGLQTRNVDLALAGISITDERKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++ K    + SV  L G  + V++GT       DY KA+        F  +
Sbjct: 106 GYYNSGLLVMVKKDNNDVKSVKDLDGKVVAVKSGTAGV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +           DA   D   +     T     +   + D +       A  +G ++   
Sbjct: 162 DNAYLELGTGNADAVLHDTPNILYFIKTAGHG-QFKAVGDSLEAQQYGIAFPKG-SDLRE 219

Query: 240 IVSWTHY 246
            V+    
Sbjct: 220 KVNGALK 226


>gi|224371142|ref|YP_002605306.1| ABC-type amino acid transport system, periplasmic amino
           acid-binding protein [Desulfobacterium autotrophicum
           HRM2]
 gi|223693859|gb|ACN17142.1| ABC-type amino acid transport system, periplasmic amino
           acid-binding protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 277

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 22/251 (8%)

Query: 4   DFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            FF + +  ++L          +     S +  + K G L+ G++T  V +A     G  
Sbjct: 9   TFFTTAVVALVLACATIIPQVYAAPNGESTVEQVMKNGVLRVGMST-FVPWAMKDKTGKL 67

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D    L+  +      +Q++P        AL + + DI+         R  +L +
Sbjct: 68  MGFEIDVATRLAKDMGVK---VQFIPTKWSGIIPALLTGKFDIIIGGMGILPSR--NLKV 122

Query: 117 AFRPITYFDGQGFIM----HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F     + G          K              +  + G+T    +  Y         
Sbjct: 123 NFSIPYDYTGMSMAASTTLAKDFSGLEAFNQKDVVLSARLGSTGVAAIKKYLP----NAS 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             +F+   +        R               + +      + L +  ++ P+  A+ +
Sbjct: 179 IRMFDDEAQAFQEAINGRVHGVVSSAPTPAFQAIKHPTKL-FLPLKENFTREPIGFAVKK 237

Query: 233 GDTEWYNIVSW 243
           GD +  N ++ 
Sbjct: 238 GDFDTINFLNN 248


>gi|308178340|ref|YP_003917746.1| L-cystine ABC transporter substrate-binding protein TcyA
           [Arthrobacter arilaitensis Re117]
 gi|307745803|emb|CBT76775.1| L-cystine ABC transporter, substrate-binding protein TcyA
           [Arthrobacter arilaitensis Re117]
          Length = 275

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 71/238 (29%), Gaps = 14/238 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +   + L  ++  G L  G       F+  + + +  G+DV+   A+   +  +   +
Sbjct: 38  GSAETGATLKKVQDSGVLTVGTEGTYRPFSFHEGD-ELTGYDVEVIEAVGEKMGVE---V 93

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           ++        F  L + + D+++        RE      F           +        
Sbjct: 94  KFQETQWDAIFAGLDAGRFDVIANQVSINPEREE--KYLFSEPYTVSTGVVVTKSDNSDI 151

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +  Q        Q+ T+      +  K    K  P+      +     +  R DA   D 
Sbjct: 152 TSFQTLKGKTTAQSLTS---NFYETAKDAGAKVEPVE--GWAQSITLLKQGRVDATVNDK 206

Query: 199 SALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                L      P + + +  +   +S  A A+ +   E    +      +    EL 
Sbjct: 207 LTF--LDAQKTNPDDSIKIAAESEEQSKSAVALRKDSPELAKAIDSALEELRADGELA 262


>gi|91777939|ref|YP_553147.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand
           binding protein [Burkholderia xenovorans LB400]
 gi|91690599|gb|ABE33797.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 260

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    ++G   GFD+D    + + +    +K  ++  +      
Sbjct: 23  KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI  +   L G ++ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTAESLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEPKG--AKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   +    +        + + DT+    V      ++
Sbjct: 196 RGAGFDFVGKDLEDPKILGNGAGIGMRKEDTDLKTKVDKAIAEII 240


>gi|28869031|ref|NP_791650.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213968638|ref|ZP_03396780.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301385503|ref|ZP_07233921.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302059837|ref|ZP_07251378.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302132498|ref|ZP_07258488.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28852271|gb|AAO55345.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213926571|gb|EEB60124.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331017445|gb|EGH97501.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 258

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 79/245 (32%), Gaps = 23/245 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGALALSVLAQPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    +K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGVTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    +           A+ +GD
Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGFAFVGPAFTDPDYFGDGIGIAVRKGD 223

Query: 235 TEWYN 239
               +
Sbjct: 224 KANLD 228


>gi|327188021|gb|EGE55251.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CNPAF512]
          Length = 276

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 72/224 (32%), Gaps = 13/224 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60
           K    ++  + I    +    A   L  IK RG L  G+      F  +   +   KG++
Sbjct: 4   KILPKALFAMSISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGYN 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL+  +      I    +    R   LQ  ++DIL  N  +T  R   L     P
Sbjct: 64  LDIAKALADDLGVKLETIT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                G   +  K  G+   + L G  +CV  G+     L + + A              
Sbjct: 121 -YDRSGGAAVGRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEKYGA-----EVKGLPSQP 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           E   A +   C              L  DRP +      +    
Sbjct: 175 ESLLALQGGNC--VVAVHVGATLGLLLQDRPEDWKDYAILFPTE 216


>gi|19553156|ref|NP_601158.1| glutamate ABC-type transporter, periplasmic component
           [Corynebacterium glutamicum ATCC 13032]
 gi|62390791|ref|YP_226193.1| glutamate binding protein [Corynebacterium glutamicum ATCC 13032]
 gi|1346149|sp|P48242|GLUB_CORGL RecName: Full=Glutamate-binding protein; Flags: Precursor
 gi|732702|emb|CAA57061.1| gluB [Corynebacterium glutamicum]
 gi|21324721|dbj|BAB99344.1| ABC-type transporter, periplasmic component (glutamate)
           [Corynebacterium glutamicum ATCC 13032]
 gi|41326129|emb|CAF20292.1| GLUTAMATE SECRETED BINDING PROTEIN [Corynebacterium glutamicum ATCC
           13032]
          Length = 295

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 80/252 (31%), Gaps = 19/252 (7%)

Query: 6   FVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
            +    L  +  T+   ++     L  I + G +  G      G      +    G DVD
Sbjct: 13  ILGATALAGVTLTACGDSSGGDGFLAAI-ENGSVNVGTKYDQPGLGLRNPDNSMSGLDVD 71

Query: 63  FCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
                   ++     D   I++    + +R   +Q+ ++D+++        R  S  + F
Sbjct: 72  VAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSINAGR--SESVNF 129

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                   Q  ++ +    I ++  L +G  +C  +G+T    + D             +
Sbjct: 130 GGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLP----GVQLQEY 185

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQG 233
           +       A      DA T D + L+      +      E     +  +       + + 
Sbjct: 186 DTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGIGLKKD 245

Query: 234 DTEWYNIVSWTH 245
           D E  + ++   
Sbjct: 246 DQEGTDAINAAL 257


>gi|330831200|ref|YP_004394152.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Aeromonas veronii B565]
 gi|328806336|gb|AEB51535.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Aeromonas veronii B565]
          Length = 245

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 82/256 (32%), Gaps = 30/256 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  + L  TS                +K         F  +    +++GFD
Sbjct: 1   MKKSLL--LVAAMGLLSTSVMA-----------KEIKFATEATYAPFEYLDDKNEFQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+         +  +          +L+ ++ D      D T  R     + F  
Sbjct: 48  IDLARAICEQA---KLECSFHNQAFDSLIPSLKFRRYDAAIAAMDVTPERAA--QVDFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y +   F+  K        ++   ++ VQ GT+ +  L D + +       + +   +
Sbjct: 103 IYYENSAVFVAKKG-AFKGPEEMVDKTVGVQNGTSHQSYLVDNWVSKG--LLTVPYASYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                    R D    D +        +    E+ ++   ++ +         A+ +G+ 
Sbjct: 160 SAFLDMMNGRTDGVFADTAVAADWLKQHK---EYAVVGTPVTDAKYFGTGFGIAVAKGNQ 216

Query: 236 EWYNIVSWTHYAMVTA 251
           E    ++    A + A
Sbjct: 217 ELLTQLNKGL-AEIKA 231


>gi|310766721|gb|ADP11671.1| Putative amino acid ABC transporter, substrate binding protein
           [Erwinia sp. Ejp617]
          Length = 261

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 10/200 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             A  L DI+KRG L+  +      F  V  +   +G+D+D    L+  +     K+Q +
Sbjct: 21  ARADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLV 77

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P+ +  R   LQ+ ++D++  +      RE    + F         G    ++  + S +
Sbjct: 78  PVTSANRVPYLQTDKVDLVISSLGKNPEREKV--IDFSRAYAPFFLGVFGPQQGTLKSAA 135

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +LSG S+ V  G   ++ L               +E      +AY + +          +
Sbjct: 136 ELSGKSVGVTRGAVEDMVLTSVVPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVV 192

Query: 202 YALKLTNDR--PSEHVILPD 219
            A+   N    P    +L D
Sbjct: 193 AAIARQNADKAPVAQFMLKD 212


>gi|294083904|ref|YP_003550661.1| putative amino acid ABC transporter [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663476|gb|ADE38577.1| putative amino acid ABC transporter [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 277

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 11/242 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                ++++ L  +  TS    A  L  DI+KRG LK G++T  V +A     GD  GF+
Sbjct: 8   KARVIMALVALFGVVATSLPAIADDLIADIQKRGTLKVGMST-FVPWAMRDKQGDLIGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L++ +  +   ++++P        +L +K+ D++      T  R +++      
Sbjct: 67  IDVATKLAADMGVE---VEFVPTAWSGIIPSLIAKKFDVIIGGMSITPQRNLTVNFTTPY 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                            S++   + +  +I  + G T        F           F+ 
Sbjct: 124 AHSGQMMAANKKLSSSFSTIDDYNQSSVTIACRRGATPCKAAQKLFPK----STLRQFDD 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +           A                         + +++     A+ +GD++  
Sbjct: 180 DAQAFQEVVNGNAHAMISSAPKPRFWSEAYPDEVFVAFDGENLTRGNEGFALRKGDSDAL 239

Query: 239 NI 240
           N 
Sbjct: 240 NF 241


>gi|323529552|ref|YP_004231704.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Burkholderia sp. CCGE1001]
 gi|323386554|gb|ADX58644.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1001]
          Length = 260

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    ++G   GFD+D    + + +    +K  ++  +      
Sbjct: 23  KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI   +  L G S+ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTADSLKGKSVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEPKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQADIGFLKTP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   +    +        + + DT+    V      ++
Sbjct: 196 RGAGFQFVGKDLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240


>gi|261212508|ref|ZP_05926793.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio sp. RC341]
 gi|260838439|gb|EEX65095.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio sp. RC341]
          Length = 243

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLTG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALVDQLNAALEAVKENGEYA 234


>gi|166366656|ref|YP_001658929.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
 gi|166089029|dbj|BAG03737.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
          Length = 263

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 14/236 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAI---FD 73
           T  S    +L  I + G LK         F+ +    G W G+ V+  R +   +     
Sbjct: 6   TIPSNEEPVLQRIARTGELKAAARKDATPFSYIDEKTGQWTGYGVELMRLVQRRLAQELG 65

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            P  I +       RF  ++  Q+D+       T  R     + F    +  G  F+  +
Sbjct: 66  KPITITFTEATTNNRFQQVEQGQVDLSCNAATITEER--LEKVNFSIPYFMTGAQFLTKR 123

Query: 134 K--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           +    I     L+  +I     TTT+  +   +   N +          E  A  +    
Sbjct: 124 ENVDKIDINHTLAAVAIAYIPHTTTDSIIRYIYPLANWQ----AVSDRSEAVAKLQRGEV 179

Query: 192 DAYTGDISALYALKLTN-DRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +A   D   L    +     P + V+LP   I+       + + D EW   V    
Sbjct: 180 NAVVSDGILLLGELVKQGQDPRQFVLLPSQPITTELYGCILPKNDPEWKKFVDTVV 235


>gi|330966763|gb|EGH67023.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 258

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 23/245 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGALALSVLAQPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    ++  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KARCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGVTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    +           A+ +GD
Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGFAFVGPAFTDPNYFGDGIGIAVRKGD 223

Query: 235 TEWYN 239
               +
Sbjct: 224 KANLD 228


>gi|330879705|gb|EGH13854.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 258

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 79/245 (32%), Gaps = 23/245 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L   +F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGALALSVLAQPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    +K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGVTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    +           A+ +GD
Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGFAFVGPAFTDPNYFGDGIGIAVRKGD 223

Query: 235 TEWYN 239
               +
Sbjct: 224 KANLD 228


>gi|289677303|ref|ZP_06498193.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 258

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 25/241 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     I  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +  +       P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222

Query: 234 D 234
           D
Sbjct: 223 D 223


>gi|260769235|ref|ZP_05878168.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio furnissii CIP 102972]
 gi|260614573|gb|EEX39759.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio furnissii CIP 102972]
 gi|315181775|gb|ADT88688.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio furnissii NCTC 11218]
          Length = 243

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 31/255 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+    ++                +K  +      F  V  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASASAQQ-------------EIKFVMEATYAPFEFVDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCQQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSH 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLSG-KVADQAALKGKRVGVQNGSTHQSYLLEQLP----DVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          S    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDSNLTYVGEHVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVT 250
                ++    A+  
Sbjct: 215 ALLEQLNNALSAVKE 229


>gi|227329259|ref|ZP_03833283.1| arginine-binding periplasmic protein 1 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 243

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 80/248 (32%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I+  +     + +  A           ++         F  V AN   +GFD
Sbjct: 1   MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +   +           L+ ++ + +    D T  R     ++F  
Sbjct: 48  IDLANALCKEM---QATCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ ++ L+G  + VQ GTT +  L       +     + ++  +
Sbjct: 103 PYYDNSAQFIAQKG-KVADIAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      ND  S     +         L  A+ Q + E  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNDTLSTVGQKVTDKGYFGIGLGIAVRQNNDELL 217

Query: 239 NIVSWTHY 246
                   
Sbjct: 218 KKFDTALN 225


>gi|262403805|ref|ZP_06080363.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio sp. RC586]
 gi|262350309|gb|EEY99444.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio sp. RC586]
          Length = 243

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKQL---EATCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +               + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKGEGN---LAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALLDQLNAALEAVKENGEYA 234


>gi|145295856|ref|YP_001138677.1| hypothetical protein cgR_1781 [Corynebacterium glutamicum R]
 gi|140845776|dbj|BAF54775.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 295

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 19/252 (7%)

Query: 6   FVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
            +    L  +  T+   ++     L  I + G +  G      G      +    G DVD
Sbjct: 13  ILGATALAGVTLTACGDSSGGDGFLAAI-ENGSVNVGTKYDQPGLGLRNPDNSMSGLDVD 71

Query: 63  FCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
                   ++     D   I++    + +R   +Q+ ++DI++        R  S  + F
Sbjct: 72  VAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDIIAATYSINAGR--SESVNF 129

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                   Q  ++ +    I ++  L +G  +C  +G+T    + D             +
Sbjct: 130 GGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLP----GVQLQEY 185

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQG 233
           +       A      DA T D + L+      +      E     +  +       + + 
Sbjct: 186 DTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGIGLKKD 245

Query: 234 DTEWYNIVSWTH 245
           D E  + ++   
Sbjct: 246 DQEGTDAINAAL 257


>gi|82777720|ref|YP_404069.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella dysenteriae Sd197]
 gi|309784981|ref|ZP_07679614.1| histidine-binding periplasmic protein [Shigella dysenteriae 1617]
 gi|81241868|gb|ABB62578.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Shigella dysenteriae Sd197]
 gi|308927351|gb|EFP72825.1| histidine-binding periplasmic protein [Shigella dysenteriae 1617]
          Length = 260

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +Y+    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEYWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|312958427|ref|ZP_07772947.1| ABC lysine/arginine/ornithine transporter [Pseudomonas fluorescens
           WH6]
 gi|311286970|gb|EFQ65531.1| ABC lysine/arginine/ornithine transporter [Pseudomonas fluorescens
           WH6]
          Length = 250

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 22/236 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    +    T+ +              LK GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAVSMAFSATAMAE------------TLKMGIEAAYPPFNNKDASGNVVGFDK 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +  ++     +      AL +K+ D L  +   T  R+    + F   
Sbjct: 52  DIGDALCAKMKVEKCEV--YVSDWDGIIPALNAKKFDFLVSSLSITEERK--QAVDFTDP 107

Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y +   FI  K      +  + L G  I  Q  T     L D            +++  
Sbjct: 108 YYSNKLQFIAPKATADFKTDAAYLKGKVIGAQRATLAGSYLEDKLP----DTEAKLYDTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E       + R D    D    Y    + D  +       ++    +  A+ +GD 
Sbjct: 164 ENAYLDLTSGRLDGILADKYVQYEWLKSKDGSAYEFKGDPVVESDKIGIAVRKGDP 219


>gi|218514470|ref|ZP_03511310.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
          Length = 217

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 72/224 (32%), Gaps = 13/224 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60
           K    ++  + I    +    A   L  IK RG L  G+      F  +   +   KG++
Sbjct: 4   KILPKALFAMSISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGYN 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL+  +      +    +    R   LQ  ++DIL  N  +T  R   L     P
Sbjct: 64  LDIAKALADDLGVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                G   +  K  G+   + L G  +CV  G+     L + + A              
Sbjct: 121 -YDRSGGAAVGRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEQYGA-----EVKGLPSQP 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           E   A +   C              L  DRP +      +    
Sbjct: 175 ESLLALQGGNC--VVAVHVGATLGLLLQDRPEDWKDYAILFPTE 216


>gi|159185708|ref|NP_357248.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140842|gb|AAK90033.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 279

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 65/196 (33%), Gaps = 12/196 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62
                 + +  +   + +     L  IK RG L  G+      F  +     + KG ++D
Sbjct: 11  KLIAGTVVIASMATAAHADA--TLDRIKGRGKLTVGVILSGAPFGFIDPKTQEQKGLNID 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL++ +  D        +    R   LQ  ++DIL  N  +T  R  +L     P  
Sbjct: 69  VAKALAAGLGVDLVT---ETVTPPNRVQFLQQGKVDILIANMQYTEERAKTLDYVPTP-Y 124

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              G   I  K  GI   S L G   CV  G+     L + + A              E 
Sbjct: 125 DRQGGAAIGRKDSGIKDWSDLKGKIACVSQGSNYTQPLIEQYGA-----QVKALPSQPES 179

Query: 183 DAAYRAHRCDAYTGDI 198
             A +   CD      
Sbjct: 180 LLALKGGNCDVSVHVN 195


>gi|307244700|ref|ZP_07526803.1| bacterial extracellular solute-binding protein, family 3
           [Peptostreptococcus stomatis DSM 17678]
 gi|306491951|gb|EFM64001.1| bacterial extracellular solute-binding protein, family 3
           [Peptostreptococcus stomatis DSM 17678]
          Length = 276

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 91/249 (36%), Gaps = 16/249 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAE-VKANGD--WKGFDVDFCRALSSAIFDDPSKIQYL 81
             L  IK  G L  G   G   F   V  +G     G D+D  + ++  I      ++  
Sbjct: 36  DDLAKIKANGKLVVGTAPGYPPFEFVVDKSGKSQVVGADIDLAKKIADEIGVK---LEIK 92

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISS 139
            ++     +ALQS ++D++  +   T  R+    + F  + +      I++    K IS 
Sbjct: 93  AMDFDALIMALQSSKVDMVITSMTPTEERKK--SVDFSDVYFEGTNSIIVNINFSKDISK 150

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L    + VQ G+  E+   +  KA            + ++ A  +    D       
Sbjct: 151 EDDLKNIVLGVQRGSVQEIYAKEVLKA----PKIKSLTAIPDLIADMKNGNIDGIIASTV 206

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE-WYNIVSWTHYAMVTAEEL-GIT 257
                    +      +     +K   A AI +G+ +   +IV+ T  ++  + +   I 
Sbjct: 207 VAKINANQYEGIKLIDVNLSQANKEEAAIAIKKGENKALLDIVNKTIKSLKDSGQYEEIL 266

Query: 258 QKNINQVSK 266
            KNI+  SK
Sbjct: 267 NKNIDLASK 275


>gi|302337866|ref|YP_003803072.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635051|gb|ADK80478.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 282

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 82/256 (32%), Gaps = 28/256 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFAE 49
            K   +  L +I+       +N               L  I K G L    +        
Sbjct: 8   KKSIILLALVMILSLLVGACSNGGQSAANATKVQEDALQKILKSGKLVIATDLTGPPVQY 67

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
             A G   G  V+     +  +  +   I++  +  +    +L + ++D+++ N   +L 
Sbjct: 68  KDAEGKPAGLIVELMELAAKELGVE---IEWQDMAWESLIPSLTAGKVDMIAANMSMSLS 124

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAH 167
           R     + F     F G   ++ K  GI    +L   G  +    G++    L +     
Sbjct: 125 RAK--AIRFSDPYMFTGVYAMVRKDSGIRDWEELLEPGKILAATMGSSHATYLKE----- 177

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           N  Y P  +E   +     +  R D    D   L      N    E  +  + +      
Sbjct: 178 NYNYEPKQYESSTDFINELKNGRIDGVMDDELLLLEFCKQNP---EFTLTANPVRPDVYG 234

Query: 228 PAIIQGDTEWYNIVSW 243
            A  QG+ +   +V W
Sbjct: 235 LAFTQGN-QNDTLVDW 249


>gi|254254679|ref|ZP_04947996.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           dolosa AUO158]
 gi|124899324|gb|EAY71167.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           dolosa AUO158]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 21/243 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ + + +L  ++ +  A      K    ++ G++     F     +G   GFD
Sbjct: 1   MKK--ILAAVTVALLAVSAGTAYA------KDWTTVRFGVDASYPPFESKGPDGKVVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +    +K  ++  +      AL++++ D +  +   T  R+  +   F  
Sbjct: 53  VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K  G+  +   L G SI V+ GT  E     Y+         + ++  
Sbjct: 108 KLFNTPTRLVTKKGAGLQPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +++ A   A R D    D        L   R +        +             + + D
Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGAGFDFAGKDLDDPKTLGEGAGIGLRKED 225

Query: 235 TEW 237
           T+ 
Sbjct: 226 TDL 228


>gi|34496307|ref|NP_900522.1| lysine/arginine/ornithine ABC transporter [Chromobacterium
           violaceum ATCC 12472]
 gi|34102160|gb|AAQ58527.1| subunit of the lysine/arginine/ornithine transporter (ABC
           superfamily) [Chromobacterium violaceum ATCC 12472]
          Length = 259

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 78/255 (30%), Gaps = 22/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L+     +++         K    ++ G++     F     NG   GFD
Sbjct: 1   MKKALAALAVGLMAASLGAYA---------KDWKEIRFGVDASYAPFEYKAPNGQVVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K  ++  +      AL++K+ D +  +   T  R     +AF  
Sbjct: 52  IDLGNEICKRM---KAKCVWVENDFDGMIPALKAKKFDGVLSSMSMTEAR--MKEIAFSA 106

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +     G+  + + L G  + V+ GT  E     ++         + ++  
Sbjct: 107 KLFNTPTRMVAKAGSGLMPTPASLKGKRVGVEQGTIQEAYAKKHWAPAG--VEVVPYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAIIQGD 234
             + A   A R DA   D        L               +            + + D
Sbjct: 165 TLVLADLTAGRLDASLQDAVQADIGFLKKPEGKGFAFAGKDLVDPQTLGEGAGIGLRKED 224

Query: 235 TEWYNIVSWTHYAMV 249
            +    +      M+
Sbjct: 225 KDLKAGIDKAIADML 239


>gi|330811540|ref|YP_004356002.1| Putative amino acid transporter, binding component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379648|gb|AEA70998.1| Putative amino acid transporter, binding component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 258

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 78/227 (34%), Gaps = 12/227 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ GI      FA   + G  +GFD D   AL + +     K +++         AL+
Sbjct: 25  KTLRIGIEAAYPPFASKTSEGKIEGFDYDIGNALCAQM---QVKCEWIEGEFDGLIPALK 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
            K+ID+   +   T  R+    + F    YF     +M +   +      L G ++ VQ 
Sbjct: 82  VKKIDLALSSMTITEERKK--SVDFTHKYYFTSSRLVMKEGAVVDDQYASLKGKTVGVQR 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TTT+    +  +          +   EEI     + R DA   D   L           
Sbjct: 140 ATTTDRYATEVLEPKG--VIVKRYSNNEEIYMDLASGRLDAIFADTIPLEDFLSMPRGKG 197

Query: 213 EHVILPDI----ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              + P++            A+ +G+T+    ++     +    E  
Sbjct: 198 YAFVGPELKDPKYVGEGAGIAVRKGNTQLVADLNKAIDGIRANGEYQ 244


>gi|260769495|ref|ZP_05878428.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Vibrio furnissii CIP
           102972]
 gi|260614833|gb|EEX40019.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Vibrio furnissii CIP
           102972]
          Length = 259

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 15/217 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K G       F    A+G   GFD++  +AL S +  +    +++  +      AL +
Sbjct: 27  TIKIGTEGAYPPFNYYTADGQLAGFDIEIGKALCSEMKVE---CEFVAQDWDGIIPALLA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D++  +   T  R+    ++F          F++ K  GI   S   + G  I  Q+
Sbjct: 84  GKYDMILASMFITEARK--QQVSFSAPYQASAMTFVVDKNSGIKDVSPKAMKGLIIGAQS 141

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT    L     A+  +    ++   + ++    + R DA  GDI  +     ++D   
Sbjct: 142 STTQAEYLL----ANYPESDVRLYPTQDAVNLDLASGRIDAQAGDIMPMTDWLSSDDGAC 197

Query: 213 EHVILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245
            H     I         +  A+ + D      V+   
Sbjct: 198 CHKAGDLITDSKYVGDGVGIALRKEDDALRQRVNQAL 234


>gi|254261687|ref|ZP_04952741.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           1710a]
 gi|254220376|gb|EET09760.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           1710a]
          Length = 326

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 72/230 (31%), Gaps = 14/230 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 88  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 144

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 145 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 202

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 203 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 257

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            L      P           ++ +     +G+ ++   +     A + A+
Sbjct: 258 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL-ASMRAD 305


>gi|24113682|ref|NP_708192.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           flexneri 2a str. 301]
 gi|30063736|ref|NP_837907.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           flexneri 2a str. 2457T]
 gi|24052750|gb|AAN43899.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           flexneri 2a str. 301]
 gi|30041991|gb|AAP17717.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           flexneri 2a str. 2457T]
 gi|281601751|gb|ADA74735.1| Lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           flexneri 2002017]
 gi|313651134|gb|EFS15533.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella
           flexneri 2a str. 2457T]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 95/279 (34%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYALFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I      L G  + V  G+T E    + +++  +    + +   
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + +   A R DA   D  A     L      +       +             + +  
Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDY 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E     +          EL       ++++K   + +V
Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257


>gi|270292808|ref|ZP_06199019.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M143]
 gi|270278787|gb|EFA24633.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M143]
          Length = 482

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 78/254 (30%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +F    +        +K         ++    F    +N ++ G D
Sbjct: 1   MKKKILACLLILFPIFSLGIAKA----DTVKS--KYIIASDSSFAPFVFQNSNNEYTGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +   I+           A+Q+ Q D +      T  R+ +    F  
Sbjct: 55  MDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT--FDFSD 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       + +   I+S   L   ++ V+ GT ++  L +    +  K     F    
Sbjct: 110 SYYTANTILGVKESSTIASYEDLKDKTVGVKNGTASQTFLTENQSKYGYK--IKTFSDGS 167

Query: 181 EIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            +  +      DA   D        +       P     + +       A A+ +G    
Sbjct: 168 SMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGET------AFAVKKGTNPE 221

Query: 238 YNIVSWTHYAMVTA 251
              +     A + A
Sbjct: 222 LIQMFNKGLANLKA 235


>gi|220909289|ref|YP_002484600.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219865900|gb|ACL46239.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 282

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 10/237 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           S  A        R  L  G  T    F     + G+  GFD++    ++  +       Q
Sbjct: 46  SAQAQTPNSQPPRTTLVMGTATDYPPFQYRIGSEGEIVGFDIELANYIAKKLG---LTYQ 102

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              ++  +   AL  +++D        T  R     + F  + +      I    + I  
Sbjct: 103 IQDIDFNQLIPALAGRKLDFALAAITPTPER--RQIVDFSLVYFQSRDTIISRSDREIKQ 160

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L+G S+ VQ GT  E  + +           + F RV E+  A R  + DA   +  
Sbjct: 161 FRDLAGRSVGVQLGTIQERQIEE-LTQQMPNLKIVRFRRVGEMVQALRIGQVDAAIVE-- 217

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A+ A   T +RP   +        +  A A  +G     +  +     M+++ E+ +
Sbjct: 218 AIVAETYTENRPELKMYPITEKPATEFAIAFPKGSVLVKDF-NRILQEMISSGEMEL 273


>gi|15601514|ref|NP_233145.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae O1 biovar eltor str. N16961]
 gi|121590867|ref|ZP_01678191.1| arginine-binding periplasmic protein 1 [Vibrio cholerae 2740-80]
 gi|121728653|ref|ZP_01681671.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae V52]
 gi|147671951|ref|YP_001215537.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae O395]
 gi|153215610|ref|ZP_01950055.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae 1587]
 gi|153818668|ref|ZP_01971335.1| arginine-binding periplasmic protein 1 [Vibrio cholerae NCTC 8457]
 gi|153824407|ref|ZP_01977074.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae MZO-2]
 gi|153829857|ref|ZP_01982524.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae 623-39]
 gi|254285780|ref|ZP_04960743.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae AM-19226]
 gi|255746480|ref|ZP_05420427.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholera CIRS 101]
 gi|262152375|ref|ZP_06028508.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae INDRE 91/1]
 gi|262168601|ref|ZP_06036297.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae RC27]
 gi|262189842|ref|ZP_06048175.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae CT 5369-93]
 gi|9658181|gb|AAF96657.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121547274|gb|EAX57395.1| arginine-binding periplasmic protein 1 [Vibrio cholerae 2740-80]
 gi|121629064|gb|EAX61510.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae V52]
 gi|124114698|gb|EAY33518.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae 1587]
 gi|126510821|gb|EAZ73415.1| arginine-binding periplasmic protein 1 [Vibrio cholerae NCTC 8457]
 gi|146314334|gb|ABQ18874.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae O395]
 gi|148874658|gb|EDL72793.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae 623-39]
 gi|149741961|gb|EDM55990.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae MZO-2]
 gi|150424277|gb|EDN16215.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae AM-19226]
 gi|227015180|gb|ACP11389.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae O395]
 gi|255736234|gb|EET91632.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholera CIRS 101]
 gi|262023130|gb|EEY41835.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae RC27]
 gi|262030826|gb|EEY49457.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae INDRE 91/1]
 gi|262034273|gb|EEY52680.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae CT 5369-93]
          Length = 243

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALLDQLNAALEAVKENGEYA 234


>gi|322806287|emb|CBZ03855.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum H04402 065]
          Length = 272

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S +  IK+ G L  G       +  
Sbjct: 1   MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +DI+    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164
           T  R+    + F  I Y   Q  ++  +      S+ +  G  I VQ GTT E    +  
Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVGAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           K            +V ++    +  + D    +     +       
Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217


>gi|253688088|ref|YP_003017278.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754666|gb|ACT12742.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 243

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 80/248 (32%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I+  +     + +  A           ++         F  V AN   +GFD
Sbjct: 1   MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +   +           L+ ++ + +    D T  R     ++F  
Sbjct: 48  IDLANALCKEM---QANCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L+G  + VQ GTT +  L       +     + ++  +
Sbjct: 103 PYYDNSAQFIAQKG-KVADVAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      ND  S     +         L  A+ Q + E  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNDTLSTVGQKVTDKGYFGIGLGIAVRQNNDELL 217

Query: 239 NIVSWTHY 246
                   
Sbjct: 218 KKFDDALN 225


>gi|78355215|ref|YP_386664.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217620|gb|ABB36969.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 247

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 75/236 (31%), Gaps = 23/236 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +   +++L   +++              L    +T    F      G++ GFD
Sbjct: 1   MKRVILAAFALVMLLSANAWAQ------------KLVVAHDTNFKPFEFKDETGNYTGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++S I  +     + P +       LQS   D           R+    + F  
Sbjct: 49  IELWKAIASEIGVEY---TFQPNDFNGIIPGLQSATFDAGIAGITIKPERQEV--VDFSD 103

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I  +  L    I  +  T++    AD+      K +  ++   
Sbjct: 104 PYYDSGLVILVRADNNDIKGIEDLKDKVISTKLATSS----ADFAAGFAPKDNIKLYPNN 159

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           + +     +   DA   D+  +        +    V+ P +        A  +G  
Sbjct: 160 DAMFLELLSGGADAVIFDMPVVKDFAQKAGKGQVKVVGP-LYQGQSYGIAFPKGSD 214


>gi|323528249|ref|YP_004230401.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323385251|gb|ADX57341.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 265

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 80/220 (36%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F    A G  +GFDVD   A+ + +     K +++         ALQ+
Sbjct: 32  TLRFGIEAAYPPFESKSATGQLQGFDVDVGNAVCAKM---AVKCEWVENAFDGLIPALQA 88

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           ++ D+++   + T  R+    + F P  Y      +  +  G+   V  L G  + V  G
Sbjct: 89  RKFDVINSAMNITAKRK--QTIDFTPPIYVVPIVMVAKRGSGLMPDVKSLQGKRVGVLQG 146

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + +   +++     A R DA   +   +    L      +
Sbjct: 147 SSQEDFLKAHWANAGVS--VVSYADQDQVYTDLVAGRLDAAVQEAQTVEDGFLKKPAGHD 204

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I    +S            + +GD      V     A+
Sbjct: 205 YAIAGQPLSDPATLGEGTGFGMRKGDKALAKKVDAALDAL 244


>gi|167561990|ref|ZP_02354906.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia oklahomensis EO147]
          Length = 258

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 15/222 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G++     F     +G+  GFDVD  + +   I     K  + P +      AL+
Sbjct: 23  KTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NVKCVWTPQDLDGIIPALK 79

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           +K+ D++  +   T  R     + F    Y      I      +  +V  L G  + V+ 
Sbjct: 80  AKKFDVIVSSLTVTAKR--REQIDFSDKLYDAPARMIAKAGSPLAPTVESLKGKHVGVEQ 137

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T E     +++        + ++  +++ A   + R DA   D        L   R  
Sbjct: 138 GSTQETFAKAHWEPKG--VTVVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTPRGK 195

Query: 213 EHVILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAM 248
                     K P       A  + + D +  + +     AM
Sbjct: 196 GFAWAG-PAVKDPKTLGDGTAMGLRKEDADLKDAIDRALAAM 236


>gi|152989615|ref|YP_001346625.1| amino acid binding protein [Pseudomonas aeruginosa PA7]
 gi|150964773|gb|ABR86798.1| probable amino acid binding protein [Pseudomonas aeruginosa PA7]
          Length = 263

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ GI      F+     G+  GFD D   AL + +     K Q++       
Sbjct: 24  AVAADGNLRIGIEAAYPPFSFKTPEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             +L+ ++ID    +   T  R     + F    YF     +M +  +   S SQL+G  
Sbjct: 81  IPSLKVRKIDAALSSITITEERRR--SVDFTRKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G T +   +            + +   +EI     A R DA   D   L    L 
Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196

Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             R   +  +                A+ +GD E    ++    A+
Sbjct: 197 TPRGKGYAFVGPEFKDPKHFGEGAGIAVRKGDAELLGKLNAAIDAI 242


>gi|330955420|gb|EGH55680.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           Cit 7]
          Length = 243

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 79/246 (32%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +  +       P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222

Query: 234 DTEWYN 239
           D    +
Sbjct: 223 DKANLD 228


>gi|330898594|gb|EGH30013.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 92/276 (33%), Gaps = 29/276 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +       +           + +   K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       +++  +       L++++ D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  +  G +   + L G ++  + GT  E           +      +   
Sbjct: 108 ELFSGPTSLVFKRGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +++ +   + R DA   D+       L +   +++ +   I             D+E   
Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPI-------------DSELLP 212

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
             +    A    E   +  K I  + KD T  ++Q+
Sbjct: 213 AKTAIGIAQGNKELKALLDKGIEAMHKDGTYAEIQK 248


>gi|224477395|ref|YP_002635001.1| hypothetical protein Sca_1910 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422002|emb|CAL28816.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 262

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 76/259 (29%), Gaps = 15/259 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M +     +  ++ +   +    +S     K +     L  G       F      G+  
Sbjct: 1   MKRILLTVLTIVLTVALAACGNGSSDNKSSKSKDDNKTLVVGTEGTYAPFTYHDKKGNLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+D  +A++  +      +++        F  L S + D+++        RE      
Sbjct: 61  GYDIDVTKAVAKEMGYK---VKFKETQWDSMFAGLDSGRFDMIANQVGINKDREAKYK-- 115

Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     +     +++K    I S   + G  +  Q  T+    LA    A       +  
Sbjct: 116 FSKPYTYSSGVLVVNKDNKNIKSFDDVKGKKLA-QTFTSNYGELAKSKGA-----ELVKV 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +     ++HR +    D  +    K          I  +            + D  
Sbjct: 170 DGFNQAMDLLQSHRVEGTFNDSLSYLDYKKQKPDAKIKEIKGNAEKSKTAFTFTKKEDDA 229

Query: 237 WYNIVSWTHYAMVTAEELG 255
               V+     +    EL 
Sbjct: 230 TIKKVNKALDKLEKDGELA 248


>gi|254442759|ref|ZP_05056235.1| Bacterial extracellular solute-binding protein, family 3
           [Verrucomicrobiae bacterium DG1235]
 gi|198257067|gb|EDY81375.1| Bacterial extracellular solute-binding protein, family 3
           [Verrucomicrobiae bacterium DG1235]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 24/258 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     ++ + ++  +                 L  G+      F     N   +G  VD
Sbjct: 2   KSIRYLLIAITLVLTSCKPAPED--------NTLVVGMELSYPPFEMSDENNQPRGVSVD 53

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              AL  ++      ++   +       +L++ +ID++  +   T  R  S  + F    
Sbjct: 54  LAYALGESLG---RPVRIENIAFAGLISSLKTGKIDLILSSMTATEER--SQSIDFSDPY 108

Query: 123 YFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              G   ++ K   I  +  +     SI V+ GTT  L   D+ K        +  E+  
Sbjct: 109 LETGLCLLVSKDSDIQDIANADQPDKSIAVKQGTTGHLYAIDHVK----HAQVLPLEKET 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    + DA+  D  +    +     P     +         A  I +G+ E    
Sbjct: 165 AAVIEVTQGKADAFIYDQMS--TFRNWQRHPDTTRPILTPFKTEHWAIGIQKGNEELVQS 222

Query: 241 VSWTHYAMVTA---EELG 255
           ++        A   EELG
Sbjct: 223 INAFLTEFKAAGGFEELG 240


>gi|315182023|gb|ADT88936.1| hypothetical amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Vibrio furnissii NCTC
           11218]
          Length = 259

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K G       F    A+G   GFD++  +AL S +  +    +++  +      AL +
Sbjct: 27  TIKIGTEGAYPPFNYYTADGQLAGFDIEIGKALCSEMKVE---CEFVAQDWDGIIPALLA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + +++  +   T  R     ++F          F++ K  GI   S   + G  I  Q+
Sbjct: 84  GKYNMILASMFITEAR--QQQVSFSAPYQASAMTFVVDKNSGIKDVSPKAMKGLIIGAQS 141

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT    L     A+  +    ++   + ++    + R DA  GDI  +     ++D   
Sbjct: 142 STTQAEYLL----ANYPESDVRLYPTQDAVNLDLASGRIDAQAGDIMPMTDWLSSDDGAC 197

Query: 213 EHVILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245
            H     I         +  A+ + D      V+   
Sbjct: 198 CHKAGDLITDSKYVGDGVGIALRKEDDALRQRVNQAL 234


>gi|153952126|ref|YP_001398328.1| cjaC protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939572|gb|ABS44313.1| cjaC protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 251

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 76/237 (32%), Gaps = 16/237 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F V ++ L+ LF  +   N S   +      LK G       F     N    GFD
Sbjct: 1   MKKIFSVVLVALVGLFLNAC--NDSKNKESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++ +   T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWIETNFDGLIPALKAGKIDMIASSMSATDER--RQSVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + + L G  I VQ GT     L +              + +
Sbjct: 113 PYYISKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNTQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                A + ++ DA   D           + P       +       + A  +   +
Sbjct: 168 NIAVLALKNNKIDAIVADEDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 222


>gi|82752009|ref|YP_417750.1| extracellular amino acid binding ABC transporter [Staphylococcus
           aureus RF122]
 gi|82657540|emb|CAI81983.1| extracellular amino acid binding ABC transporter [Staphylococcus
           aureus RF122]
          Length = 259

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 13/213 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   KK I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENKKDIKDFDDVKGKKVA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +      + R D    D  +    K       
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201


>gi|45358018|ref|NP_987575.1| amino-acid ABC transporter [Methanococcus maripaludis S2]
 gi|44920775|emb|CAF30011.1| Probable amino-acid ABC transporter [Methanococcus maripaludis S2]
          Length = 248

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 93/263 (35%), Gaps = 18/263 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  + LI+      S  +  +  IK  G L  G+       A    NG+  GF+
Sbjct: 1   MKKICFLMAIVLILAISACISLPSEQI-TIK-TGTLSVGVFKHAPP-AVYGQNGELIGFE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      +++          A+ + +ID    +   +  RE    ++F  
Sbjct: 58  VELVSEIAKRM---NLNVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKI--VSFTR 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    ++ K+ GI +++ L+G  I V   T  E       K+  M +  I +E   
Sbjct: 113 AYSHTELVVLVRKESGIRTITDLNGKKIGVVDDTIHETKAKSLQKS--MDFEIIEYETPI 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+       + DA   ++              + + L D +       A+ + + E  + 
Sbjct: 171 ELYNDLNNGKIDATISEMDNF-----KVSSYMDQLELIDTLEILYSGIAVNKNNKELLHE 225

Query: 241 VSWTHYAMVTA---EELGITQKN 260
           +      + T    EEL     N
Sbjct: 226 MDRVLLELETEGYIEELKQKWSN 248


>gi|298695678|gb|ADI98900.1| extracellular amino acid binding ABC transporter [Staphylococcus
           aureus subsp. aureus ED133]
          Length = 259

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 13/213 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +      + R D    D  +    K       
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201


>gi|257468246|ref|ZP_05632342.1| extracellular solute-binding protein, family 3 [Fusobacterium
           ulcerans ATCC 49185]
 gi|317062527|ref|ZP_07927012.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688203|gb|EFS25038.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 244

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 90/247 (36%), Gaps = 23/247 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L  + +  +            K+   L  G N     F  +  +G   GFD
Sbjct: 1   MKKLFCAVMLLFMGIVGSVSFA--------KENKVLYVGTNAEFQPFEYL-EDGKIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +  +   I++  +       ALQ+K++D++      T  R+    + F  
Sbjct: 52  VELMEEIAKLLGKE---IEWKNIAFDGLLPALQAKKLDVIIAGMTATEERKKF--VNFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  +++K+  +      L+G ++ V  G T ++ ++              +   
Sbjct: 107 TYYTSNQMILINKENPVVESFDKLAGHNVGVILGYTGDIAVSAI-----DGVKVQRYNGA 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +A + DA   D S         ++  E  ++   +SK   A A+ + +    +
Sbjct: 162 AEAIMALKAKKVDAVVLD-SEPAKNYAKQNK--ELGLINTDVSKEEYAIAVGKDNKALAD 218

Query: 240 IVSWTHY 246
            +     
Sbjct: 219 NIDKALK 225


>gi|188534746|ref|YP_001908543.1| Putative amino acid ABC transporter, substrate binding protein
           [Erwinia tasmaniensis Et1/99]
 gi|188029788|emb|CAO97667.1| Putative amino acid ABC transporter, substrate binding protein
           [Erwinia tasmaniensis Et1/99]
          Length = 261

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 10/223 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  L DI+KRG L+  +      F  V  +   +G+D+D    L+  +     K+Q +P
Sbjct: 22  HADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMANYLARQM---KLKLQLVP 78

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + +  R   LQ+ ++D++  +      RE    + F         G    ++  + + ++
Sbjct: 79  VTSANRVPYLQTDKVDLVISSLGKNPEREKV--IDFSRAYAPFFLGVFGPQQGTLKNAAE 136

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           LSG S+ V  G   ++ L               +E      +AY + +          + 
Sbjct: 137 LSGKSVGVTRGAVEDMVLTSVAPK---DAQVKRYEDNNTTLSAYLSGQVQYIATGNLVVA 193

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A+       ++  +    +  SP    + +G+      V    
Sbjct: 194 AMARQ--NAAKAPLSQFTLKDSPCFIGLKKGEPALKAKVDALI 234


>gi|170694514|ref|ZP_02885667.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170140648|gb|EDT08823.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 264

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 13/226 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            +   K+   ++ G++     F  +  +G   GFDVD   A+   +    +K  ++  + 
Sbjct: 22  TMASAKEWTTIRIGVDPTYPPFESIAKDGTVVGFDVDLGNAICEKL---KAKCVWVQSSF 78

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFIMHKKKGISSVSQLS 144
                 LQ+++ D++  +      R     + F         +         +   S+L+
Sbjct: 79  DGLIPGLQARKFDVILSSMAANAKR--REQIDFTDRLYRNQTRLIAKDSAHLLPEASKLA 136

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  + V+ GT  E    + + +       + +   ++  +   A R DA   D       
Sbjct: 137 GKRVAVEQGTVQETYAREKWASSG--VEVVAYPSYDQAYSDLTAGRVDAVLMDAVQGKLG 194

Query: 205 KLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
            L            D++  + +     A  + + + +  + ++   
Sbjct: 195 FLATPAGKGFSFAGDVVYDAKIMGDGDAAGVRKSEPQLRDALNGAI 240


>gi|57505525|ref|ZP_00371452.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Campylobacter upsaliensis RM3195]
 gi|57016072|gb|EAL52859.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Campylobacter upsaliensis RM3195]
          Length = 252

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 75/237 (31%), Gaps = 15/237 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  ++  + LF  + S  +    D      L+ G       F     +    G D
Sbjct: 1   MRK-IFAFLVAFLSLFVVACSDTSVTNNDSNASLSLRVGTAPNYKPFDYK-EDAKLTGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++     +  ++ ++ ++      AL++ +ID+++     T   +    + F  
Sbjct: 59  IDLVNEIAKR---EGIELTWVEMSFDGLIPALKTGKIDMIASAMSATE--DRRKSVDFSD 113

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y     +I  K   + +S   L G  I VQ GT     L +              E +
Sbjct: 114 VYYTTKNLYIKKKDNEVLNSKEDLEGKIIGVQLGT-----LQEPAAKAIKDTKVQSNESL 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             +    +  + DA   D           +         +       + A  +   +
Sbjct: 169 SVVIMELKEGKIDAVVADKDVSTGYL--KENADLIGFFEEEDGSEGFSFAFDKDKQK 223


>gi|254849920|ref|ZP_05239270.1| arginine ABC transporter [Vibrio cholerae MO10]
 gi|254845625|gb|EET24039.1| arginine ABC transporter [Vibrio cholerae MO10]
          Length = 255

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 13  MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 60  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 115 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 169

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 170 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 226

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 227 ALLDQLNAALEAVKENGEYA 246


>gi|27381499|ref|NP_773028.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27354667|dbj|BAC51653.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 275

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 73/222 (32%), Gaps = 10/222 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           + A    D+KK+G +  GI      +  V ++G   G D D  RA +  +        ++
Sbjct: 26  SQAGTPEDVKKKGVVVIGIQGDNPPWGYVDSSGKQDGIDADMGRAFAEYLGVKAE---FV 82

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL    R  AL + ++DIL         R     + +      +    +  +   I+S +
Sbjct: 83  PLAVANRIPALTTGRVDILFATMAMLPERAK--AVQYSKPYVANEITLVAAQATPINSNA 140

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            +    I V   +T +  + +   A         F+       A  + +  A   +    
Sbjct: 141 DMGKYVIGVPRSSTQDTQVTNSAPA---GTEIRRFDDDAATIQALLSGQVQAVGANS--F 195

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           Y  +L   +P          +          GD EW    + 
Sbjct: 196 YPQRLNAAKPELGFEPKLHFTALYNGACTRLGDKEWNETANK 237


>gi|15967027|ref|NP_387380.1| putative amino acid-binding periplasmic ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307302494|ref|ZP_07582251.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|307316176|ref|ZP_07595620.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|15076300|emb|CAC47853.1| Putative amino acid-binding periplasmic ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306898016|gb|EFN28758.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306903164|gb|EFN33754.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 257

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 71/233 (30%), Gaps = 14/233 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L ++K  G LK G       F    A+G   GFDV+  + ++  +   P    +
Sbjct: 21  AEAGQNLDEVKSAGVLKIGTEGTYAPFTYHDASGALVGFDVEIGQEVAKRLGVKPE---F 77

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISS 139
           L          L + + D +      T  R+      F           I+    + I  
Sbjct: 78  LEGKWDGLIAGLDANRYDAVINQVGITEERKK--KYDFSEPYIASKAVLIVRGDDEEIKD 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G     Q+ T+    LA    A       +  +  ++        R DA   D  
Sbjct: 136 FADLKGKKSA-QSLTSNFGKLAQASGA-----ELVGTDGFDQSIQLVLTGRADATINDSL 189

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +    K      +  +              I +G+ E    ++    A + A+
Sbjct: 190 SFLDFKKQKPDANVKIAAEKPD-ADYSGIIIRKGEPELLEAINKAL-AEIKAD 240


>gi|269797244|ref|YP_003311144.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
 gi|269093873|gb|ACZ23864.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 16/252 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K      L  +                 ++ G L+ G  T    F   + +  + GFDV
Sbjct: 4   FKKLTAIALVAVAAMGLLAGCGNDKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+S  I     K+++  +       A+QS  ID+++   + T  RE    L F  +
Sbjct: 63  DLSEAISKKIG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKV--LDFSDV 117

Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +      I ++ +L+G ++ VQ GT                      +  
Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGVQIGTIPVEMAQKI-----PGTTVKQIDSN 172

Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             I    +A   D A   +  A+Y LK   D+  + V  P     + L   + +G+    
Sbjct: 173 ANIFMELKAGTIDGAIIDNAVAMYYLKQGADQDLKLVGEPTKSPGTVLG--VKKGNKALQ 230

Query: 239 NIVSWTHYAMVT 250
             V+     +  
Sbjct: 231 EAVNKALKELKE 242


>gi|15925404|ref|NP_372938.1| ABC transporter (periplasmic amino acid-binding protein)
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927992|ref|NP_375525.1| hypothetical protein SA2202 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268849|ref|YP_001247792.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394923|ref|YP_001317598.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980729|ref|YP_001442988.1| hypothetical protein SAHV_2398 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253314751|ref|ZP_04837964.1| hypothetical protein SauraC_00970 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253734170|ref|ZP_04868335.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255007188|ref|ZP_05145789.2| hypothetical protein SauraM_11985 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794754|ref|ZP_05643733.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A9781]
 gi|258407434|ref|ZP_05680577.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A9763]
 gi|258422238|ref|ZP_05685150.1| extracellular solute-binding protein family 3 [Staphylococcus
           aureus A9719]
 gi|258439630|ref|ZP_05690376.1| ABC transporter [Staphylococcus aureus A9299]
 gi|258442813|ref|ZP_05691373.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A8115]
 gi|258446487|ref|ZP_05694642.1| extracellular solute-binding protein family 3 [Staphylococcus
           aureus A6300]
 gi|258450396|ref|ZP_05698488.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A6224]
 gi|258455228|ref|ZP_05703188.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A5937]
 gi|269204046|ref|YP_003283315.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus ED98]
 gi|282893861|ref|ZP_06302093.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A8117]
 gi|282928447|ref|ZP_06336048.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A10102]
 gi|295405101|ref|ZP_06814914.1| hypothetical protein SMAG_00247 [Staphylococcus aureus A8819]
 gi|297244158|ref|ZP_06928048.1| hypothetical protein SLAG_00246 [Staphylococcus aureus A8796]
 gi|13702363|dbj|BAB43504.1| SA2202 [Staphylococcus aureus subsp. aureus N315]
 gi|14248188|dbj|BAB58576.1| ABC transporter (periplasmic amino acid-binding protein)
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|16117310|dbj|BAB69777.1| putative amino acid ABC transporter [Staphylococcus aureus]
 gi|147741918|gb|ABQ50216.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149947375|gb|ABR53311.1| extracellular solute-binding protein family 3 [Staphylococcus
           aureus subsp. aureus JH1]
 gi|156722864|dbj|BAF79281.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|253727865|gb|EES96594.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257788726|gb|EEV27066.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A9781]
 gi|257840946|gb|EEV65397.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A9763]
 gi|257841669|gb|EEV66106.1| extracellular solute-binding protein family 3 [Staphylococcus
           aureus A9719]
 gi|257847406|gb|EEV71408.1| ABC transporter [Staphylococcus aureus A9299]
 gi|257851934|gb|EEV75868.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A8115]
 gi|257854555|gb|EEV77503.1| extracellular solute-binding protein family 3 [Staphylococcus
           aureus A6300]
 gi|257856488|gb|EEV79397.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A6224]
 gi|257862439|gb|EEV85207.1| extracellular solute-binding protein, family 3 [Staphylococcus
           aureus A5937]
 gi|262076336|gb|ACY12309.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus ED98]
 gi|282589842|gb|EFB94926.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A10102]
 gi|282763919|gb|EFC04047.1| polar amino acid transport system substrate-binding protein
           [Staphylococcus aureus A8117]
 gi|285818075|gb|ADC38562.1| Cysteine ABC transporter, substrate-binding protein [Staphylococcus
           aureus 04-02981]
 gi|294970046|gb|EFG46064.1| hypothetical protein SMAG_00247 [Staphylococcus aureus A8819]
 gi|297178936|gb|EFH38181.1| hypothetical protein SLAG_00246 [Staphylococcus aureus A8796]
 gi|312830760|emb|CBX35602.1| L-cystine-binding protein tcyA [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128572|gb|EFT84576.1| hypothetical protein CGSSa03_01000 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329723698|gb|EGG60227.1| putative cystine-binding periplasmic protein [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 259

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R D    D  +    K          I  +            + D E   
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQ 228

Query: 240 IVSWTHYAMVTAEELG 255
             +     +    EL 
Sbjct: 229 KFNDGLKKIEENGELA 244


>gi|170722938|ref|YP_001750626.1| cationic amino acid ABC transporter periplasmic binding protein
           [Pseudomonas putida W619]
 gi|169760941|gb|ACA74257.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida W619]
          Length = 261

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 81/254 (31%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +    S +              LK GI      FA  + +G   GFD
Sbjct: 1   MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    +K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +S     L G  I VQ G+  +    +   A       + +   
Sbjct: 106 RYYLTPARLVMKDGATVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    + +         A+ +GD
Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPSFTDAKYFGDGIGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
                 ++    A+
Sbjct: 224 DANRERINKAIDAI 237


>gi|77457437|ref|YP_346942.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77381440|gb|ABA72953.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 89/233 (38%), Gaps = 13/233 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                S L   K+   L+ G++     F    A+G   GFD+D   A+ + +     K +
Sbjct: 14  CMAAGSALA--KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAEL---KVKCK 68

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++  +       L++ + D +  +   T  RE    + F    +     ++  K  GI+ 
Sbjct: 69  WVESDFDGMIPGLKANKFDGVISSMTVTEAREKV--IDFSSELFSGPTAYVSKKGSGITD 126

Query: 140 VSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
               L G ++  + GT  E           +K     ++  +++ +   + R DA   D+
Sbjct: 127 DVASLKGKTVGYEQGTIQEAYAKAVLDKAGVKTQ--AYQNQDQVYSDLTSGRLDAGIQDM 184

Query: 199 SALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTHYAM 248
                  L + + +++ +   + +    +  A  I +G+TE   ++     A+
Sbjct: 185 LQAELGFLKSPQGADYEVSKPVDNHLLPAKTAVGIKKGNTELKALLDKGIKAL 237


>gi|296127372|ref|YP_003634624.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
 gi|296019188|gb|ADG72425.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
          Length = 286

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 83/269 (30%), Gaps = 33/269 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-----------------------ILGDIKKRGFLK 37
           M K   + IL   +LF  S S   +                        L  ++  G L 
Sbjct: 1   MKKASII-ILSFFLLFAVSCSKEDNKNQPLNNFDIVKEDEMQVQEEDNSLSRVQNAGKLV 59

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G++        V  NG+  GFD+D  R ++  +          P++       L + +I
Sbjct: 60  LGLDDTFAPMGFVGDNGEIVGFDIDLAREVAKRMGVQLET---KPIDWGSSTSILTNGEI 116

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTT 156
           D+L    + +  R++ +   F      +    + +     I+S+  L+G  + VQ G   
Sbjct: 117 DVLWNGLNISDERKLYM--NFSKPYLNNMLIIVKNNDDESINSIDDLAGKIVGVQYGGNY 174

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E        +         +    +  A  +  R +A   D        +        ++
Sbjct: 175 EQISNHPIVSQ--IKELRQYNGNIDALADLQNDRLNAVIIDD-VFAQYYIAQKNAPFTIV 231

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                +    A  I + D +    +    
Sbjct: 232 YSTPFTDGLYAVGIKKSDKKLLEEIDKIL 260


>gi|169349947|ref|ZP_02866885.1| hypothetical protein CLOSPI_00687 [Clostridium spiroforme DSM 1552]
 gi|169293160|gb|EDS75293.1| hypothetical protein CLOSPI_00687 [Clostridium spiroforme DSM 1552]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 99/261 (37%), Gaps = 23/261 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WK 57
           M K F + +  +++    +      AS   ++K+   +   ++     +  +  +G    
Sbjct: 4   MKKCFKLLLAGIMVFTLVACGGEEKASEEENVKE---INIAVSPDYPPYESLDTDGKTIV 60

Query: 58  GFDVDFCRALSSAIFDDPS---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           GFD D   AL     +D     K  +  ++ +     +Q  Q+DI      +   R    
Sbjct: 61  GFDADMI-ALFPEYLNDGDTTYKFVWHSMSFENIVSQVQGGQVDIGVSGFTYDKSR---- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            +A+        Q  ++ K   I +V  L G +I  Q+G+T E    +   A+      +
Sbjct: 116 KVAWSKPYTATAQVAVVDKDSDIKTVKDLEGKTIAAQSGSTGEKAAKEIKNAN-----VV 170

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               V+EI ++  + + DA   D+    A+     +    V+L + +          +G+
Sbjct: 171 SVTNVQEIFSSLTSKQYDAVVVDL----AVAQNYVKEQNFVMLEESLLDEKNYIIAKEGN 226

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            E  ++++      + +++  
Sbjct: 227 DEMIDMINKCIDKFLASDDYK 247


>gi|32034338|ref|ZP_00134538.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209121|ref|YP_001054346.1| putative amino-acid ABC transporter-binding protein [Actinobacillus
           pleuropneumoniae L20]
 gi|165977093|ref|YP_001652686.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190150988|ref|YP_001969513.1| amino-acid ABC transporter-binding protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249900|ref|ZP_07336102.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307250952|ref|ZP_07532878.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307253324|ref|ZP_07535196.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307255567|ref|ZP_07537372.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307260018|ref|ZP_07541730.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|307264345|ref|ZP_07545933.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|126097913|gb|ABN74741.1| putative amino-acid ABC transporter-binding protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165877194|gb|ABY70242.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189916119|gb|ACE62371.1| putative amino-acid ABC transporter-binding protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302650963|gb|EFL81117.1| amino acid ABC transporter, substrate-binding [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306856980|gb|EFM89110.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306859188|gb|EFM91229.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306861416|gb|EFM93405.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306865854|gb|EFM97730.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306870297|gb|EFN02053.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 78/247 (31%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  +  I L  ++ S     L   I  +G +  G       F    A+G   G+
Sbjct: 1   MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L++ + D+++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   ++    + I   S + G     Q  ++    LA    A       +  + 
Sbjct: 117 AAYSWSGAALVVRNDEQKIKQASDVKGVKTA-QTLSSNYGELARANGA-----DIVPIDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +     +  R DA   D  AL      N +    ++               +G+ E  
Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDA-GFIANKGNQEAL 229

Query: 239 NIVSWTH 245
           N +S   
Sbjct: 230 NKISAAI 236


>gi|327485765|gb|AEA80171.1| Arginine ABC transporter, periplasmic arginine- binding protein
           ArtI [Vibrio cholerae LMA3894-4]
          Length = 243

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQATLKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALLDQLNAALEAVKENGEYA 234


>gi|152995144|ref|YP_001339979.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150836068|gb|ABR70044.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 252

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 80/222 (36%), Gaps = 10/222 (4%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           ++    ++         F  +   G  +GFDVD  RAL + +  D    + L  +     
Sbjct: 23  VQAADKVRFVTEGAWAPFNFIDEAGKPQGFDVDIARALCAKMAAD---CEILTQDWDGLI 79

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L+ ++ D +  +   T   +    + F    Y  G  F+         +++L G +I 
Sbjct: 80  PGLKVRKFDAIIASMSITE--DRLKVVDFTNKYYSGGLRFMGR-VGEKFDLAKLDGKTIG 136

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            Q  T     L D F     K +   ++  + +     + R D    D    Y    T++
Sbjct: 137 AQRATLGAQYLEDNFA---GKANLKFYDNQDNVYLDLISGRLDIVLSDELPTYNWLKTSE 193

Query: 210 RPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             S+     D   K   +A AI +GD +    ++    A++ 
Sbjct: 194 SGSKFEFKGDAFMKTDNIAIAIRKGDDKLKAKLNKALDAILA 235


>gi|71736093|ref|YP_275675.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|257482804|ref|ZP_05636845.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624563|ref|ZP_06457517.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289650399|ref|ZP_06481742.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|298488142|ref|ZP_07006179.1| Arginine/ornithine ABC transporter, periplasmic arginine/ornithine
           binding protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|71556646|gb|AAZ35857.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298157421|gb|EFH98504.1| Arginine/ornithine ABC transporter, periplasmic arginine/ornithine
           binding protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|320323223|gb|EFW79311.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320329746|gb|EFW85735.1| arginine/ornithine ABC transporter, periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330866225|gb|EGH00934.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. aesculi str. 0893_23]
 gi|330988691|gb|EGH86794.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331012327|gb|EGH92383.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 258

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 77/246 (31%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     I  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTVISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +          P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDAGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222

Query: 234 DTEWYN 239
           D     
Sbjct: 223 DKANLE 228


>gi|194429471|ref|ZP_03061994.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli B171]
 gi|194412532|gb|EDX28831.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli B171]
 gi|195183048|dbj|BAG66608.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O111:H-]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFIENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|326317637|ref|YP_004235309.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374473|gb|ADX46742.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 283

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 16/259 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
            ++ +  ++      +   + L  I++RG +  G+      F  +   +    G++ D  
Sbjct: 14  LLAGIAAVLTLMAGTAHADATLDKIRQRGKVSIGVLVNGGPFGSIDPASQQLVGWNPDLA 73

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RAL+  +  +   +Q   +    R   LQ+ ++D+L  + +    R   LG A  P    
Sbjct: 74  RALAKGLGVEADLVQ---VQTATRVQFLQAGKVDLLIASMELNPERAAILGYAPTPFYRV 130

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
            G   +  K  GI     L G  +C+  G++    L   + A         F+   +   
Sbjct: 131 GGTAAV-RKDSGIQKWEDLRGKPVCLSQGSSYARPLTAEYGA-----QVQGFKTASDSLL 184

Query: 185 AYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A +   C A   D + ++  L+   +       +   +  +P      +G+ +    V  
Sbjct: 185 ALKGGNCVAAVHDSTLIHPLLRTNAEWSQYAAPITAELLPAPSVVWTRKGEADTIAAVDK 244

Query: 244 THY-----AMVTAEELGIT 257
                     + A E  + 
Sbjct: 245 VVQDWHRSGWLIATEKRLG 263


>gi|170736978|ref|YP_001778238.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169819166|gb|ACA93748.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 267

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 87/254 (34%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + +          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLLVTALAFAPLASFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + S + L+G  + +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPVGSKLLPSAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++ + +     A  I +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIVAI 238


>gi|241895266|ref|ZP_04782562.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871572|gb|EER75323.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 494

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 98/288 (34%), Gaps = 29/288 (10%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNAS----ILGDIKKRGFLKCGINTGLVGF 47
           M K    +I+ L+ +          F   S NA      L  IKK G L  G +     +
Sbjct: 1   MKKWMKKAIVLLMAIGMFISSGIGIFGVSSANADETDPTLQHIKKSGQLVVGTSAEYAPY 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                +       GFD+D  R ++  +      +    ++      A+++ +ID+     
Sbjct: 61  EFHKTINGQDKIIGFDMDVARTIAKHLGVK---LVVQDMSFDALLGAVKTGKIDMAIAGM 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLAD 162
             T  R+    + F    Y D    +  K+     +++ QL  A +  Q  ++      D
Sbjct: 118 TSTPERKK--EVNFSTPYYNDKNVILTLKQNKNKFATLQQLQNAKLGAQVSSSQASLAGD 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                      +  +RV ++       + DA     +   +    +D+ +    +  I +
Sbjct: 176 L-----TSKPIVSVKRVTDMVTQLSQKKVDAVVVAQTTAKSYLDQSDQFAITKAVLPIKT 230

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYA-MVTAEELGITQKNINQVSKDTT 269
            + ++  + +        V     A ++ A       K I Q++K  +
Sbjct: 231 GNAVSVVMNKNAPVLKEKVDGILKAHVIGAPLHRWQNKAIKQMNKKES 278


>gi|153800747|ref|ZP_01955333.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MZO-3]
 gi|124123722|gb|EAY42465.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MZO-3]
          Length = 243

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 82/258 (31%), Gaps = 27/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEW 237
           +     +  R D+  GD + +       D   E+    +       +    A+ + +   
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW-FKGDNKLEYVGERVTNPQYFGNGFGIAVNKDNQAL 216

Query: 238 YNIVSWTHYAMVTAEELG 255
            + ++    A+    E  
Sbjct: 217 LDQLNAALEAVKENGEYA 234


>gi|147921224|ref|YP_684964.1| ABC-type glutamate import system, periplasmic component [uncultured
           methanogenic archaeon RC-I]
 gi|110620360|emb|CAJ35638.1| ABC-type glutamate import system, periplasmic component [uncultured
           methanogenic archaeon RC-I]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 69/238 (28%), Gaps = 12/238 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75
            T               G L          F  +    G++ GFD+D    +   +    
Sbjct: 21  VTPTPAANVTQNLTMTPGVLSVATEAHYPPFENINTTTGEFYGFDIDLMNEIGKELG--- 77

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKK 134
            +++Y          A+Q+ + D            +    + F    Y   GQ  +    
Sbjct: 78  LEVKYTDHAFDTIIPAVQAGKFDCAISAFTI--RPDRQQSIDFTDWYYESAGQAIVTKPG 135

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I + S L G  +  QAGT               + +   +  + E   A +    +A 
Sbjct: 136 SSIKNASDLVGKIVGAQAGTVGFDATKAI--EGMPEENVKSYATMNEAFMALKKGEVEAV 193

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            GD           D P ++ +   +         + + + +    ++    A + A+
Sbjct: 194 VGDYPVCEPYY--RDTPGDYALAGPLSETEYFGIVVNKQNKQLTAAINEAL-ANIKAD 248


>gi|29829027|ref|NP_823661.1| glutamate binding periplasmic protein [Streptomyces avermitilis
           MA-4680]
 gi|29606133|dbj|BAC70196.1| putative glutamate ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 277

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 7/201 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  GI     G  +    G + GFDVD    ++  +     +I++    + +R   LQ  
Sbjct: 39  ITIGIKFDQPGIGQKTPQG-YSGFDVDVATYIAKQLGYKADQIEWKESKSADRETMLQRG 97

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
            +  ++ +   T  R     + F        Q  ++      I S S L+   +C   G+
Sbjct: 98  DVKFIAASYSITPER--QEKVDFAGPYLLAHQDVLVRADDNSIKSPSDLNSKKLCSVTGS 155

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T+   + D       K + + +          +    D  T D S L           + 
Sbjct: 156 TSAQNVKDKLA---PKANLLKYPTYSACLTGLQNKAIDGLTTDDSILAGYAAQASFKGKF 212

Query: 215 VILPDIISKSPLAPAIIQGDT 235
            +    ++       + +G  
Sbjct: 213 KLAGFKMTNENYGIGVKKGSD 233


>gi|323494404|ref|ZP_08099513.1| ABC-type transport system periplasmic substrate-binding protein
           [Vibrio brasiliensis LMG 20546]
 gi|323311334|gb|EGA64489.1| ABC-type transport system periplasmic substrate-binding protein
           [Vibrio brasiliensis LMG 20546]
          Length = 257

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 86/268 (32%), Gaps = 26/268 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M     V++ C  +    + +  A           LK GI       FA   ANG + G+
Sbjct: 1   MKLAKLVALSCTALSLAMAQAQAAP----------LKVGIGTESYPPFAVPDANGQYSGW 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    +         + + +         +L + ++DI++ +   T  R     + F 
Sbjct: 51  EIDIANEICKQA---KLECEIVATAWDGIIPSLVAGKVDIIAASLSITDERSKV--IDFS 105

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G    +     I  +   L+G  I VQ+G+  +  +  +FK          ++ 
Sbjct: 106 NKYYQSGASLAVAAGSDITPTAESLAGKKIGVQSGSIHQSYVLKHFK----DAEIKEYQT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233
            +E +    + R DA   D + L     T +          + +        +   + +G
Sbjct: 162 QDEANQDLFSGRIDATLADATVLGEFLTTREGELCCSSAGLVKNDEAILGKGIGFGLRKG 221

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNI 261
           + E    +      +           N 
Sbjct: 222 NDELKAKLDQAIVDIRQNGTYDKITNNY 249


>gi|239627923|ref|ZP_04670954.1| glutamine-binding periplasmic protein [Clostridiales bacterium
           1_7_47_FAA]
 gi|239518069|gb|EEQ57935.1| glutamine-binding periplasmic protein [Clostridiales bacterium
           1_7_47FAA]
          Length = 282

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L    N     +      G+  G D +  +A++  +     +++   +        + S
Sbjct: 64  VLVMATNAEFPPYEFHDG-GEIVGIDAEIAKAIADELG---MELEIEDIAFDSIIPEITS 119

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D+       T   +    + F        Q  I+ +   I+S   L+G  + VQ GT
Sbjct: 120 GKADMGLAGMTVTE--DRKQSVDFTDTYAKASQKIIVKEDSAIASPDDLTGVIVGVQQGT 177

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T ++ ++D             + +  E   A    + DA   D           +     
Sbjct: 178 TGDIYVSDLEA---DGTTVERYNKGFEAVQALSQGKIDAVVIDGEPAKTFVAQTEG---L 231

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            IL +  +    A A+ +G+TE    ++    
Sbjct: 232 KILEESFTDEEYAIAVKKGNTELLEKINGALK 263


>gi|224824085|ref|ZP_03697193.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224603504|gb|EEG09679.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 272

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 77/262 (29%), Gaps = 21/262 (8%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR----------GFLKCGINTGLVGFA 48
           M   +   ++ L L     T+    A    +                   G +     F 
Sbjct: 1   MKQTRRTLLAGLLLSAFALTACGKKAEAPAEQAASSAPAQATAAAKEYLVGSDASYAPFE 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +    + +GFDV+   A +        K++++    +  F  L     D+L+     T 
Sbjct: 61  FLNDKKEVQGFDVEVLTAAAEKGG---FKVKFVNTPWEGMFATLDQGDRDLLASAITITD 117

Query: 109 LREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
            R+    + F    +   Q   +      + +   L    + VQ GTT +  +       
Sbjct: 118 ERKK--NMDFSDPYFEARQLIAVGKNVTDVKTFQDLKNKKVAVQTGTTGDEVVQKLLGKT 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPL 226
           N   +   FE +            DA  GD   +    + N       V      +    
Sbjct: 176 N--PNIKRFESMPLALKELENGGVDAAVGDNGVVSNYVINNPQNGLATVEDTKSFAPEYY 233

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
             A  +G+ E    V+    A+
Sbjct: 234 GFAAKKGNAEVLAKVNAGLKAI 255


>gi|307727764|ref|YP_003910977.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307588289|gb|ADN61686.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 276

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 76/230 (33%), Gaps = 11/230 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              S + +A  L +I K G ++ G+      F  +  +    G+D+D    +  A+    
Sbjct: 33  SAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVANLIGRAL---N 89

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K++ + +    R   L   + D+L      T  RE    + F              K  
Sbjct: 90  AKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSKPYAPYYLAVFGPKAL 146

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + + + L+G SI V  GT  +L++           +   F+      +A+ + +     
Sbjct: 147 PVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAFISGQVQLMV 203

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   +      P+        +  SP    + + +      V  T 
Sbjct: 204 VGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVDETI 251


>gi|238750582|ref|ZP_04612082.1| Amino acid-binding protein [Yersinia rohdei ATCC 43380]
 gi|238711230|gb|EEQ03448.1| Amino acid-binding protein [Yersinia rohdei ATCC 43380]
          Length = 262

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 83/246 (33%), Gaps = 15/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +   CL  +   S +        I        G       F    +    +GFD
Sbjct: 1   MFKRLMLVGTCLAAVLSASSA--------IAAEPTYVVGSGATYRPFEYENSQKQLEGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+  A   +  +I+ +    +  F  L S   DI+      T  R     + F  
Sbjct: 53  IDIIKAIGKA---EGFQIKLVNTPWEGIFATLGSGDRDIIISGITITDKR--QQMVDFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   + S++ L   ++ V   +T ++ +++    +        F+   
Sbjct: 108 PYFPAEQTIVVAKGSKVDSIAALKDLNVGVVNSSTGDIVVSNVLGKN--STAIKRFDNTP 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+        T+   +  ++  D   +     A+ +G+ E  N 
Sbjct: 166 LMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFELVSDDKFERQYFGIAVAKGNEELRNK 225

Query: 241 VSWTHY 246
           ++    
Sbjct: 226 INSGLQ 231


>gi|213428679|ref|ZP_03361429.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
          Length = 239

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           R +   GD   + A+        ++ I+ +  S           A+ +G+      ++  
Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNNALLQEINAA 219

Query: 245 HYAMVTAEELG 255
              +  + E  
Sbjct: 220 LDKVKASPEYA 230


>gi|16761279|ref|NP_456896.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141025|ref|NP_804367.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213022390|ref|ZP_03336837.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213162278|ref|ZP_03347988.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213418061|ref|ZP_03351136.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213426990|ref|ZP_03359740.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581827|ref|ZP_03363653.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213622201|ref|ZP_03374984.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213852676|ref|ZP_03382208.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289812393|ref|ZP_06543022.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
 gi|289827475|ref|ZP_06546087.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25296355|pir||AH0800 histidine-binding periplasmic protein [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503578|emb|CAD07586.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136650|gb|AAO68216.1| histidine-binding periplasmic protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 260

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 91/245 (37%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L + I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCNRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|257460051|ref|ZP_05625155.1| arginine-binding periplasmic protein 1 [Campylobacter gracilis
           RM3268]
 gi|257442492|gb|EEV17631.1| arginine-binding periplasmic protein 1 [Campylobacter gracilis
           RM3268]
          Length = 246

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 76/235 (32%), Gaps = 21/235 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +   ++          S++     +  L  G N     F  V  N    GFD
Sbjct: 1   MKKFMRFLVAGALL--------CGSLIAKDIAKDTLIVGTNAEYPPFEFVDENSKVTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+         +    ++      A++S +ID+++     T  R+    + F  
Sbjct: 53  MDLVAELAKRAGVKYEILN---MSFDGLIPAIKSGKIDMIASGMSATPARKK--AIDFTA 107

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     ++  K    ++S + L G  +  Q GT  EL + D   A       +     
Sbjct: 108 PYYKVENLYVKRKDDSSLNSKADLQGKRLAAQLGTIQELAIRDIKGAEVSATENVFV--- 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                + +  + DA   D S  Y     ND  +      +       + A  +G 
Sbjct: 165 --AVMSLKNKKIDALCVDSSVGYEYLKKNDDLTAF--FKESDGSEGFSIAFDKGK 215


>gi|237813418|ref|YP_002897869.1| polar amino acid uptake abc transporter, paat family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           MSHR346]
 gi|237506059|gb|ACQ98377.1| polar amino acid uptake abc transporter, paat family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           MSHR346]
          Length = 320

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 82  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 138

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 139 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 196

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 197 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 251

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 252 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 293


>gi|160901196|ref|YP_001566778.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160366780|gb|ABX38393.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 286

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 97/258 (37%), Gaps = 16/258 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65
           ++ +   +    + +   + L  IK+RG +  G+      F  +  +     G++ +  R
Sbjct: 19  LTFIAAALALACTQARADATLDKIKQRGKVTIGVLVNGGPFGSIDPSTQQLVGWNPELAR 78

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL+  +  +   +Q   +    R   LQ+ ++D+L  + +    R  +LG A  P     
Sbjct: 79  ALAKGLGVEAELVQ---VQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPFYRVG 135

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   +  K  GI+    L G  +CV  G++    LA  + A         ++   +   A
Sbjct: 136 GIAAV-RKGSGIARWEDLRGKPVCVSQGSSFAKPLASEYGA-----QVHGYKSSSDSLLA 189

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            +   C A   D + +Y L  +N   +++   +   +  +P      +G+ +    V   
Sbjct: 190 LKGGNCVAAVHDSTLIYPLLRSNPEWAQYSAPIAGEVLPAPSVVWTRKGEADTIAAVDKV 249

Query: 245 HY-----AMVTAEELGIT 257
                    + A E  + 
Sbjct: 250 VQDWHRTGWLIAAEKRVG 267


>gi|126453748|ref|YP_001067295.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106a]
 gi|226193774|ref|ZP_03789376.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|242315677|ref|ZP_04814693.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           1106b]
 gi|126227390|gb|ABN90930.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           1106a]
 gi|225934079|gb|EEH30064.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|242138916|gb|EES25318.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           1106b]
          Length = 320

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 82  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 138

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 139 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 196

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 197 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 251

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 252 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 293


>gi|229591463|ref|YP_002873582.1| putative ABC transporter cystine-binding periplasmic protein
           [Pseudomonas fluorescens SBW25]
 gi|229363329|emb|CAY50451.1| putative ABC transport system, cystine-binding periplasmic protein
           [Pseudomonas fluorescens SBW25]
          Length = 275

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 71/252 (28%), Gaps = 21/252 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCR 65
            +   L  L  +        L  I +   L  G+       F+ +       GFDVD  +
Sbjct: 9   AAAFSLTFLLASPAVFAGQTLDRITQSKQL-VGVLMENYPPFSFLNEQNQLDGFDVDVTK 67

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +      ++    + +       + + D+   +   +  R       F       
Sbjct: 68  AVADRLGVK---LKLETPSWEVIAAGRWNGRYDVCICSMTPSAARGQVFNFPFEY-YASP 123

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP---------IVF 176
               +      I S + LSG  + V + +T E  LA                     + +
Sbjct: 124 AVVVVNADDNAIKSAADLSGKKVGVVSASTYEAYLAKDLVIEGASKPIDYPFKAVQAVPY 183

Query: 177 ERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +               R DA   +   L   K   D      I  D +   P   A  +G
Sbjct: 184 DNETIAFQDLALGTGKRLDAMVTN---LVTAKERIDHDPRFKITGDALYAEPNVVATEKG 240

Query: 234 DTEWYNIVSWTH 245
           D  W   ++   
Sbjct: 241 DPAWDAKLAQVL 252


>gi|161612912|ref|YP_001586877.1| hypothetical protein SPAB_00618 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362276|gb|ABX66044.1| hypothetical protein SPAB_00618 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 260

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNAQGELVGFDIDLVKELCKRI---NTQCTFVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L G  + V  G
Sbjct: 84  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  + I +   A R DA   D  A     L      +
Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      +    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|300780997|ref|ZP_07090851.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Corynebacterium genitalium ATCC 33030]
 gi|300532704|gb|EFK53765.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Corynebacterium genitalium ATCC 33030]
          Length = 284

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 85/247 (34%), Gaps = 14/247 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC- 64
            VS+L +  L       +  +L  I + G +  G      G + ++ +G   G D+D   
Sbjct: 10  LVSVLGVSGLSACGSPDDQDLLAQI-ESGRVDVGSAFTNPGLSMMRDDGSPAGLDIDIAT 68

Query: 65  ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               +++     D  +I++      +R   L +  +D+++ N      R  +  ++F   
Sbjct: 69  YVINSIADDNGWDHPEIEWRETPPGQRASLLDNGYVDMVASNYSIDAKR--TKEVSFAGP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                Q  +      I+ +  L G ++C   GTT   TL +             ++    
Sbjct: 127 YLLTHQALLTVDGSDITGLESLDGKNLCFVTGTTAAKTLREDIP----GVVLAEYDSYTA 182

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWY 238
              A RA   DA + D + L           + V L      ++       + + +    
Sbjct: 183 CLDALRAGAVDALSTDAAILSGFSAHEPGVFQLVPLERDGAPLNDEHYGLGLPRDNDASV 242

Query: 239 NIVSWTH 245
           + V+   
Sbjct: 243 SAVNEAL 249


>gi|229587875|ref|YP_002869994.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359741|emb|CAY46590.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 250

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 22/236 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK F ++    +    T+ +              LK GI      F    A+G+  GFD 
Sbjct: 4   YKKFLLAAAVSMAFSATAMAE------------TLKMGIEAAYPPFNNKDASGNVVGFDK 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL + +  +  ++     +      AL +K+ D L  +   T  R+    + F   
Sbjct: 52  DIGDALCAKMKVEKCEV--YVSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTDP 107

Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y +   FI  K      +  + L G  I  Q  T     L D            +++  
Sbjct: 108 YYSNKLQFIAPKATADFKTDAAYLKGKVIGAQRATLAGTYLEDKLP----DTEAKLYDTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E       + R D    D    Y    + D  +       ++    +  A+ +GD 
Sbjct: 164 ENAYLDLTSGRLDGILADKYVQYEWLKSKDGSAYEFKGDPVVESDKIGIAVRKGDP 219


>gi|15894167|ref|NP_347516.1| periplasmic amino acid binding protein [Clostridium acetobutylicum
           ATCC 824]
 gi|15023776|gb|AAK78856.1|AE007603_7 Periplasmic amino acid binding protein [Clostridium acetobutylicum
           ATCC 824]
 gi|325508295|gb|ADZ19931.1| Periplasmic amino acid binding protein [Clostridium acetobutylicum
           EA 2018]
          Length = 272

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 12/254 (4%)

Query: 1   MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55
           M K      + L++    FT  + + +   D   +  +K G +T    FA +    +   
Sbjct: 1   MKKKLITLSMALLMSVGIFTGCTQSGTSNSDNSDKNVIKVGTSTDYRPFAFINQGESQDK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            KG ++D    +      +  K++Y+  N       L S ++D ++     T  R+    
Sbjct: 61  VKGLEIDVWNEIGKR---NNWKVKYVIANWNGLIGMLDSGKVDTVAHQVTVTEERKG--K 115

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F     + G    + K    + S+  L+G ++ V++G      +  Y  A+  K +  
Sbjct: 116 YYFSDPYVYSGVQLAVKKGNNSVQSLKDLNGKTVAVESGMNFYKAIEKYN-ANGGKVNIK 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +     I +     R DA   D  A+      +    E    P    ++         +
Sbjct: 175 QYSDYNSIFSEVNLGRADALVEDKLAIMDTIKNSKYDLELAGKPIENMENAYPFIKNTAN 234

Query: 235 TEWYNIVSWTHYAM 248
            +  + ++ T  AM
Sbjct: 235 KQKVDKINKTLAAM 248


>gi|313115217|ref|ZP_07800701.1| bacterial extracellular solute-binding protein, family 3
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622495|gb|EFQ05966.1| bacterial extracellular solute-binding protein, family 3
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 273

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 13/225 (5%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
                  +        L +I+  G L   +      ++    +    G+DV+  RA++  
Sbjct: 23  AASGTAASVAPAAGDQLSNIQSSGKLIVALEGAWQPWSYHDESDTLVGYDVEVSRAIAEK 82

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +P    Y+  +    F  L + + DI+    + T  R  +    F     +      
Sbjct: 83  LGVEPE---YVESDWDSLFAGLDAGRYDIVCNGVEVTDERAKT--YDFTEPYGYIHTALA 137

Query: 131 MHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           + K    I+S   L G +      +T    LA+ + A          + +EE      A 
Sbjct: 138 VRKDNDEITSFEDLKGKTTANSLASTYME-LAESYGA-----TVQGIDTLEETIQLLTAG 191

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           R DA      + Y     +    +  ++      S +A  + +GD
Sbjct: 192 RIDATLNADVSFYDYLNVHPDA-DFKLVAQTEDASHVAIPLRKGD 235


>gi|315655534|ref|ZP_07908433.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii ATCC 51333]
 gi|315490189|gb|EFU79815.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii ATCC 51333]
          Length = 314

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 70/254 (27%), Gaps = 17/254 (6%)

Query: 2   YKDFFVSILCLIILFFTSFST-----NASILGDIKKR--GFLKCGINTGLVGFAEVKAN- 53
            K   V+    +                +   ++ K        G +     +       
Sbjct: 43  KKIVSVAAGFALAFSLAGCGGGESNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKT 102

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G++ GFD+D    ++     +   ++  P++   + + L S  +D L          +  
Sbjct: 103 GEYTGFDMDLATEVAKR---NHWTLEKKPIDWDSKDMQLYSGSVDCLWNGFTMNGREDK- 158

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKY 171
               +      +   F+      +   + L+G ++ VQA ++    L D           
Sbjct: 159 --YTWSKPYVDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFK 216

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                        +  A   DA   D+        T  +   + I+   +          
Sbjct: 217 TLNKVPDYNNAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFK 275

Query: 232 QGDTEWYNIVSWTH 245
            G+    + V  T 
Sbjct: 276 LGNKALRDQVQTTL 289


>gi|229506084|ref|ZP_04395593.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae BX 330286]
 gi|229510059|ref|ZP_04399539.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae B33]
 gi|229516380|ref|ZP_04405827.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae RC9]
 gi|229528368|ref|ZP_04417759.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae 12129(1)]
 gi|229605615|ref|YP_002876319.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae MJ-1236]
 gi|229334730|gb|EEO00216.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae 12129(1)]
 gi|229346261|gb|EEO11232.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae RC9]
 gi|229352504|gb|EEO17444.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae B33]
 gi|229356435|gb|EEO21353.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae BX 330286]
 gi|229372101|gb|ACQ62523.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae MJ-1236]
          Length = 256

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 14  MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 61  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 116 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 227

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 228 ALLDQLNAALEAVKENGEYA 247


>gi|269127884|ref|YP_003301254.1| extracellular solute-binding protein family 3 protein
           [Thermomonospora curvata DSM 43183]
 gi|268312842|gb|ACY99216.1| extracellular solute-binding protein family 3 [Thermomonospora
           curvata DSM 43183]
          Length = 301

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 13/236 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78
            +  A +   IK  G +K G +        +  +  +  G+DV+  +A+++ +       
Sbjct: 46  AALAAMVPDAIKSDGKIKVGTDASYPPNESIDPSTQEIVGWDVELFKAVAAKLGLKAE-- 103

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +           +QS + +I   +      RE    + F                    
Sbjct: 104 -FENAGFDTIIPGVQSGKYEIGVSSFTDDKEREK--AVDFVTYYSAGTAWAAPRGNPKNV 160

Query: 139 SVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           +     G +I VQ GT     L +      +A       +V ++  E++    A + DA 
Sbjct: 161 NPDDACGLTIGVQQGTVQVKDLEERSKKCTEAGKPAIKTVVRKQQTEVNNDLVAGKIDAM 220

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             D   +     T  +     I+  +   +P   AI +   ++   V     A++ 
Sbjct: 221 AADSPVVGGAVKTTGK---LEIIGQVYDTAPYGYAINKNAGQFKEAVLGAIKALIA 273


>gi|307320132|ref|ZP_07599552.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306894178|gb|EFN24944.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
          Length = 260

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 21/245 (8%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K GI       F    A+G+W+G++++F +A+ +    D       P+       AL S
Sbjct: 27  VKVGIAAEPYPPFTSPDASGNWEGWEIEFMKAMCAEAKLD---CVVTPVAWDGIIPALTS 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ID++  +   T  R  +  + F    Y    G I  K   I  +   L+G +I VQ  
Sbjct: 84  KKIDMIIGSMSITAERLKT--IDFSDKYYNTPTGIIGAKGDDIKPTPEGLAGKTIGVQVS 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +     +F           ++  +E +    A R DA   D  AL A   ++     
Sbjct: 142 TVHQAYAMKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALDAFLKSDQGKQC 199

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                ++          +   + +G+TE    V+    A+             +  SK  
Sbjct: 200 CDYKGEVAEDVDVIGPGVGVGLRKGETELKEKVNAAIKAIRE-------NGTYDAFSKKY 252

Query: 269 TNPDV 273
            + D+
Sbjct: 253 FDFDI 257


>gi|296313864|ref|ZP_06863805.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria polysaccharea ATCC 43768]
 gi|296839592|gb|EFH23530.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria polysaccharea ATCC 43768]
          Length = 275

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLKKFILGGMTALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|295103475|emb|CBL01019.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 278

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 19/228 (8%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L    N     +     +G+ +G DVD  +A++  +     ++Q   +      L+
Sbjct: 58  EAGKLTMATNATFPPYEMTTDSGEIEGIDVDTAKAIAEKLG---LELQIDDMEFDAALLS 114

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +Q  + DI+      T  R+  +   F        Q  I+     I+S   L+G  I  Q
Sbjct: 115 VQQGKADIVMAGVTVTDERKAVM--DFSDSYATGIQSIIVPNDSDIASPDDLAGKKIGTQ 172

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT  +  +D F         + ++       A    + DA   D +   A +     P
Sbjct: 173 RGTTGYIYCSDDFGE----DSVVAYDSGLTAVQALNNGQVDAVVIDNA--PATEYVAANP 226

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               +L    ++   A  + +G +   + V+         EEL     
Sbjct: 227 G-LKVLDTSYAEEDYAIGMAKG-SALEDAVNKAL------EELKADGT 266


>gi|257869938|ref|ZP_05649591.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804102|gb|EEV32924.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 489

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 19/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILG----DIKKRGFLKCGINTGLVGFAE---VKA 52
           M K F  +++ +++ F  +    +A         IK+ G L  G++     +     +  
Sbjct: 1   MCKWFASTMILIVLFFCVTTKLVHAETTDPVYEKIKQNGALIVGLSADYAPYEFHTTIDG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
             +  GFD+   + ++  +  D   ++   L       AL++ +ID++      T  R+ 
Sbjct: 61  KDEIVGFDLSIAKKIADDLGVD---LKIEELGFDALLGALKTGKIDLVISGMAATDERKK 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              + F        Q  I+ K+      S +  +G ++  Q  TT E    +        
Sbjct: 118 --EVNFSDTYMEVQQKVIVRKEDQNRFQSTADFNGVAVGAQKQTTQEELAKNEL----SG 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 ++V ++     + + DA   +     A   +ND  +    +         A AI
Sbjct: 172 SLVTSLQKVPDLITNLNSKKVDAVVMEGPVAEAYVQSNDNLAIADDVVFEKGTKETAIAI 231

Query: 231 IQGDTEWYNIVSWTHYAMV 249
            +        ++ +   +V
Sbjct: 232 SKEAPLLLEKINASIKTIV 250


>gi|90578867|ref|ZP_01234677.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio angustum S14]
 gi|90439700|gb|EAS64881.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio angustum S14]
          Length = 242

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 88/248 (35%), Gaps = 28/248 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    SI+ L+     +         DIK        +      F  +  N   +GFD
Sbjct: 1   MNKILLASIIGLVSSQAMA--------QDIK------FAMEATYAPFEYMDENNQIQGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   +    +   +   +      AL+ K+ D      D T  R     ++F  
Sbjct: 47  VDIAKALCKEM---DATCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--QQQVSFTQ 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +  GFI  K   ++ V+ L G  + VQ G+T +  L D           + +   +
Sbjct: 102 PYYDNAAGFISIKG-KVTDVAALKGKRVGVQNGSTHQSYLTDQMP----GVTAVPYTSYQ 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEW 237
           +     +  R D+  GD + +      +D    +V  P    K   +    A+ +G+ E 
Sbjct: 157 DAFIDMKNGRIDSVFGDTAVIAEWLKKDDN-LAYVGKPVTNPKYFGNGFGIAVNKGNQEL 215

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 216 VKQLNTAL 223


>gi|93006752|ref|YP_581189.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
           K5]
 gi|92394430|gb|ABE75705.1| extracellular solute-binding protein, family 3 [Psychrobacter
           cryohalolentis K5]
          Length = 278

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 28/266 (10%)

Query: 1   MYKDFFVSILCLIILFF----------------TSFSTNASILGDIKKRGFLKCGINTGL 44
           M +   +++    +L                  T+ S  + +L  I   G +  G     
Sbjct: 1   MKRRTLLALAASTVLLAACGQSPTNDAETKATDTAASGGSDLLQRINNGGTINVGTEGTY 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F     +G   G+DV+  RA++  +      +++           L +K+ D+++   
Sbjct: 61  PPFTYHDESGKLTGYDVEVTRAVADKLGVK---VEFQETQWDAMLAGLDAKRFDMVANQV 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T   E            + G   +  K     SS   L G     Q+ T+    LA+ 
Sbjct: 118 SLT-TPERLAKYDKAQAYSWSGAVVLAPKDDNRYSSWEALKGLRSA-QSLTSNYGELAER 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           ++A       I  + + +     +  R D    D  A+          +  + L   +S+
Sbjct: 176 YQA-----EVIPVDGMAQAIQLVKQDRADFTMNDNLAILDYLKKFPDAALEIKLTAPVSE 230

Query: 224 SP-LAPAIIQGDTEWYNIVSWTHYAM 248
                  +I+GD      +     A+
Sbjct: 231 QTGSGLVLIKGDDAVLAKLDEAMAAL 256


>gi|323495726|ref|ZP_08100796.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
 gi|323319193|gb|EGA72134.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
          Length = 278

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 82/250 (32%), Gaps = 16/250 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K    + L L  +   S +     L  I +RG L+ G++T  V +A     G+  GF++
Sbjct: 13  FKSAITAFLGL-AVALPSMAQETPNLDKINERGTLRVGMST-FVPWAMRNTQGELIGFEI 70

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L++        ++++P        AL +++ D++      T  R  S  + F   
Sbjct: 71  DVAKRLAADSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSVTPER--SKSVLFSTP 125

Query: 122 TYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               G     +K+        S        I  + G  T     + F         + F+
Sbjct: 126 YSHSGVQVAANKELAAGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK----ILQFD 181

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +           A            + N      +   + +SK   A A+  G+ + 
Sbjct: 182 DDAQAFQEVLNGNAHAVIASSPKPEHEAVKNADKL-FIPFSERLSKGNEAFAVRLGEDDK 240

Query: 238 YNIVSWTHYA 247
               +    A
Sbjct: 241 KAFFNKWIQA 250


>gi|300312810|ref|YP_003776902.1| glutamine ABC transporter/signal transduction system periplasmic
           protein [Herbaspirillum seropedicae SmR1]
 gi|300075595|gb|ADJ64994.1| ABC-type glutamine transport/signal transduction system,
           periplasmic component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 249

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 78/236 (33%), Gaps = 21/236 (8%)

Query: 1   MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M   F   +   L+ L     S  A           L    +T  V F     N  + GF
Sbjct: 1   MKLPFAKLVFASLVALSVVGASARAET---------LVVACDTAFVPFEFKDRN-QYVGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A++  I       +  P++      ALQ+K +D+          R+    + F 
Sbjct: 51  DIDLWDAIAKDIG---VTYKLQPMDFNGIIPALQTKNVDVALAGITIKDERKKV--IDFS 105

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G   ++     I SV+ L+G ++ V++GT+        FKA         F  +
Sbjct: 106 DGYYDSGFSLMVPVGSSIKSVADLAGKALAVKSGTSAFDYAKANFKA----TELHQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +      +  R DA   D   +     T  +     ++   +          +G  
Sbjct: 162 DNAYLELQTGRVDAAMHDTPNVLYYIATAGKGRA-KVVGTQMMAHQYGIGFPKGSP 216


>gi|296387616|ref|ZP_06877091.1| putative amino acid binding protein [Pseudomonas aeruginosa PAb1]
          Length = 263

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ GI      F+   A G+  GFD D   AL + +     K Q++       
Sbjct: 24  AVAADGSLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             +L+ ++ID    +   T  R     + F    YF     +M +  +   S SQL+G  
Sbjct: 81  IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G T +   +            + +   +EI     A R DA   D   L    L 
Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196

Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             R   +  +                A+ +GD E    ++    A+
Sbjct: 197 TPRGKGYAFVGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242


>gi|256832193|ref|YP_003160920.1| extracellular solute-binding protein family 3 [Jonesia
           denitrificans DSM 20603]
 gi|256685724|gb|ACV08617.1| extracellular solute-binding protein family 3 [Jonesia
           denitrificans DSM 20603]
          Length = 258

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 20/260 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +    +   L+ L  T+ S+  S      +  + +   L    N     F      G+
Sbjct: 1   MNRTTAFTATALLALSMTACSSTQSTETESGIALVNQN-TLTVCTNPPFEPFEYKTDAGE 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+D    +++ +  + S ++    +A E   +L+S Q DI++     T  RE    
Sbjct: 60  IVGIDMDIMAEVATDLDLELSIVE-AAFDAMESGASLESNQCDIIATGMTITEEREE--R 116

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +F    Y   QG ++     ++S+  L+G S+ VQ  TT      +         +  V
Sbjct: 117 FSFSNPYYDANQGVLVTAGTTVASLEDLNGQSVAVQIETTGASLAEE------QGLNATV 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE +  +  A    + DA   D+  L           E  I     +       + + + 
Sbjct: 171 FEDLGLVVQAVATGQTDAAIADVGTLAPYVT-----DELTIGYIEQTDEQYGFGVKKTNP 225

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V+ T   +  +  L 
Sbjct: 226 ELVTAVNNTLTRITESGRLE 245


>gi|254501487|ref|ZP_05113638.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
 gi|222437558|gb|EEE44237.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
          Length = 259

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 85/275 (30%), Gaps = 21/275 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M      S +   +         A           +K G+       F    A+G+W G+
Sbjct: 1   MKHMIKASFVATAVSVAAISGAQAQD---------VKVGVAAEPYPPFTSPDASGNWVGW 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+F  A+ +            P+       AL S +ID++  +   T  R  +  + F 
Sbjct: 52  EVEFMEAVCAEA---KLNCVITPVAWDGIIPALTSGKIDMIVGSMSITEERLKT--IDFS 106

Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K      +   LSG  + VQ  T        YF           ++ 
Sbjct: 107 DKYYNTPTSIIGAKGDDFEATPEGLSGKILGVQVSTIHAAYADKYFAPA--ADDIKQYQT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E +    A R DA   D  AL A   ++               + L   +  G  +  
Sbjct: 165 QDEANQDLAAGRVDAVQADAIALDAFLKSDAGACCEYKGNVADDTAILGAGVGVGLRKGE 224

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           + +     A + A     T     + SK   + D+
Sbjct: 225 DELKEKINAAIAA---IRTNGTYEEFSKKYFDFDI 256


>gi|186476538|ref|YP_001858008.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia phymatum STM815]
 gi|184192997|gb|ACC70962.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia phymatum STM815]
          Length = 265

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 20/246 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F      GD +GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 31  KEIRFGVEASYAPFESKSPAGDLQGFDIDIGNAVCAKL---KTKCVWVENSFDGLIPALQ 87

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++   ++ +   T  R     + F    Y      I  K  G+  + + L G  + V  
Sbjct: 88  ARKFSAINSDMSITDQRRAV--IDFTDPIYVIPNQMIAKKGSGLQPTPASLKGKHVGVLQ 145

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +    +    + ++  +++ A   A R DA   D  A     L   + +
Sbjct: 146 GTIQETYAKAKWAPAGVD--VVPYQTQDQVYADLVAGRLDASFQDAEAASKGFLKKPQGA 203

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
                   +S   L        + +GD +  + V+          EL      I++++  
Sbjct: 204 GFEFAGPAVSDEKLLGSGVGFGLRKGDAQLKDAVNQALK------ELKADGT-IDKLAAK 256

Query: 268 TTNPDV 273
             +  V
Sbjct: 257 YFDVKV 262


>gi|114705497|ref|ZP_01438400.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506]
 gi|114538343|gb|EAU41464.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506]
          Length = 292

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    ++      F  + S              L  G N G V +     NG+  GF+
Sbjct: 29  MIRQSLFALTFATAGFAVTPSLAE----------MLTAGANVGNVPWEFQDENGEITGFE 78

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + ++S +  D   +    +     F A+QS +ID+   +   T  R     ++F  
Sbjct: 79  VELLQEVASRL--DYEGVDIQNIPFNGLFSAVQSGRIDVAISSITITDER--LQSVSFAQ 134

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q        GISS   L G ++ V  G+T ++  ++      +      +E + 
Sbjct: 135 PYYDSDQSLSTRTDSGISSTQDLEGKTVGVDTGSTGDMYASEREADWGLAG-ISRYEGLN 193

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  A R DAY  DI A+           +  ++  + +    +    + D+E    
Sbjct: 194 PAMLDLAAGRIDAYVSDIPAVAYY---LRDKPDMEVVERLKTGEQYSMMFAK-DSELAAK 249

Query: 241 VSWTHY 246
            +    
Sbjct: 250 ANEVLT 255


>gi|325519349|gb|EGC98773.1| basic amino acid ABC transporter, periplasmic basic amino
           acid-binding protein [Burkholderia sp. TJI49]
          Length = 265

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61
           K    ++LCL  L   + +   +        G L+ G+       F      G W GF+ 
Sbjct: 2   KRVLRTLLCLFSLVVAALAPLGAAQA---SSGVLRFGVAAEPYPPFLMKSPTGQWSGFEA 58

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RAL   +    +K +   ++      AL S +ID++  +   T  R+  +   F   
Sbjct: 59  DLIRALCEQM---KAKCEIKEVSWDGIIPALLSDKIDVIFNSMSITPERQKVIA--FSRP 113

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y     F+  K   ++     L G  I VQ  T     +     A+       ++   +
Sbjct: 114 YYETPGTFVGAKNARLTLTPDGLKGKVIGVQGSTANAEFIK---MAYGKTATVRLYNTQD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGD 234
           + +A   A R D    D   +     T D  +  +  P  +   P      +   + + D
Sbjct: 171 DCNADLVAGRIDTMYLDQLGILDFLKTKDGSAFELKGPGSVKMDPAIFGYGVGAGMRKAD 230

Query: 235 TEWYNIVSWTH 245
                 +    
Sbjct: 231 APLKQQMDQAL 241


>gi|323492219|ref|ZP_08097377.1| ABC transporter: Substrate binding protein precursor [Vibrio
           brasiliensis LMG 20546]
 gi|323313532|gb|EGA66638.1| ABC transporter: Substrate binding protein precursor [Vibrio
           brasiliensis LMG 20546]
          Length = 279

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 17/251 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K F  +I  L+ L  +  S  +    L  I +RG L+ G++T  V +A     GD  GF+
Sbjct: 12  KGFKAAITALLGLAISLPSLASDTPNLDKINERGTLRVGMST-FVPWAMRDKQGDLIGFE 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L++        ++++P        AL +++ D++      T  R     + F  
Sbjct: 71  IDVANRLAADSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSITPERAK--SVLFTS 125

Query: 121 ITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                G     +K+        S        I  + G  T     + F         + F
Sbjct: 126 PYSHSGVQVAANKELAEGFSQLSDFDSRRVKIAARRGAFTVQVARETFPKAK----ILQF 181

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +           A            + N      +   D +SK   A A+  G+++
Sbjct: 182 DDDAQAFQEVLNGNAHAVIASSPKPEHETVKNSDKL-FIPFTDRLSKGNEAFAVRLGESD 240

Query: 237 WYNIVSWTHYA 247
                +    A
Sbjct: 241 KEAFFNSWIQA 251


>gi|302538461|ref|ZP_07290803.1| glutamine-binding periplasmic protein [Streptomyces sp. C]
 gi|302447356|gb|EFL19172.1| glutamine-binding periplasmic protein [Streptomyces sp. C]
          Length = 482

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 80/220 (36%), Gaps = 12/220 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            + ++G L    +     F   + NG   GFDV     ++  +  +  KI   P    + 
Sbjct: 249 KVVEKGKLTTCTHLPYPPFQFEQ-NGKVVGFDVALIDLVAKKLEVE-QKILDTPFENFKT 306

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GA 146
              L S Q D+ +     T  R+    + F    +   Q  +  KK GI+S++ L     
Sbjct: 307 GAFLNSGQCDLAAAGMTITDERKK--NVDFSVPYFDATQALLATKKSGITSLADLKAKNK 364

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +  QA TT E        A    ++P+ FE  + +    R  + DA   D   +     
Sbjct: 365 KLGAQAETTGESY------AKAQGFNPVAFESSDAVLNGLRTGQVDAVVIDYPVVQGWLK 418

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                +E V+  +I +      ++ +G+T     +     
Sbjct: 419 DPKNSAEFVLGQNIETGEKYGFSVKKGNTALLAAIDKAVT 458


>gi|295838853|ref|ZP_06825786.1| amino acid ABC transporter, amino acid-binding protein
           [Streptomyces sp. SPB74]
 gi|295827222|gb|EDY42336.2| amino acid ABC transporter, amino acid-binding protein
           [Streptomyces sp. SPB74]
          Length = 347

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 29/251 (11%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79
           + + + +  IK+RG L  G++     +A     G + +GFD+D  R ++  I     K++
Sbjct: 64  AKDGAAIAAIKERGELLVGVDQNSYRWAYRGTYGSEPEGFDIDLARRVAKEILGAADKVR 123

Query: 80  YLPLNAKERFLALQSKQ---------------IDILSRNTDWTLLREISLGLAFRPITYF 124
           +  ++  +R  AL   +               +D++      T  R IS  +AF    + 
Sbjct: 124 FKTVSTADRGPALGRDEKDKGKPLAERDAKASVDMIISTMSITC-RHISNDIAFSTPYFE 182

Query: 125 DGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             Q  ++ +   +      L G+ +C   G+T E  LA +  A+ +K          +  
Sbjct: 183 TRQTLVVPRDSPVKGFGPTLGGSRLCAATGSTAEAFLARHGGAYGLKP-VTKVPSQLDCL 241

Query: 184 AAYRAHRCDAYTGDISALYALKLTND-------RPSEHVILPDIISKSPLAPAIIQGDTE 236
              +    D    D +   +    +           +   LP          A+     +
Sbjct: 242 VRLQLGTVDGLVTDGALAASQLAQDPGVRIADENEGDAARLP---MPEFYGVAMRDDSPD 298

Query: 237 WYNIVSWTHYA 247
               V+     
Sbjct: 299 LVGRVNQILDG 309


>gi|237507558|ref|ZP_04520273.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei MSHR346]
 gi|234999763|gb|EEP49187.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei MSHR346]
          Length = 250

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 94/283 (33%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +I+ L ++  ++   +A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++          +  P++      ALQ++ ID+          R     + F   
Sbjct: 53  DLWAAIAK---GAGWTYKVQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA   D   +        +     +    +S         +G       
Sbjct: 164 QAYLALEAGRVDAAMHDTPNVLFFVNNEGKGRA-KVAGAPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248


>gi|148974814|ref|ZP_01811794.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
 gi|145965323|gb|EDK30572.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
          Length = 269

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 18/253 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K    ++L L  +   + ++    L  I +RG L+ G++T  V +A     GD  G
Sbjct: 1   MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  + L+         ++++P        +L S + D++      T  R     + F
Sbjct: 59  FEIDVAKRLAEDSGWK---VEFVPTAWDGIIPSLLSNKFDVIIGGMSITEARAK--SVLF 113

Query: 119 RPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                  G     +K+        S        I  + G  T     + F         +
Sbjct: 114 TEPYSHSGVQLAANKELAEGFSKVSDFDSRRVKIAARRGAFTVQVARETFPKAK----VL 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+   +           A            + N   +  +   + +SK   A A+  G+
Sbjct: 170 QFDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKNAE-TLFIPFDERLSKGNEAFAVRLGE 228

Query: 235 TEWYNIVSWTHYA 247
           T+     +    A
Sbjct: 229 TDKAEFFNEWIKA 241


>gi|134280328|ref|ZP_01767039.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           305]
 gi|217420515|ref|ZP_03452020.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           576]
 gi|134248335|gb|EBA48418.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           305]
 gi|217395927|gb|EEC35944.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           576]
          Length = 315

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 77  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 133

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 134 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 191

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 192 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 246

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 247 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 288


>gi|126440682|ref|YP_001060016.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 668]
 gi|254191837|ref|ZP_04898340.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|126220175|gb|ABN83681.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           668]
 gi|157939508|gb|EDO95178.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 315

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 77  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 133

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 134 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 191

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 192 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 246

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 247 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 288


>gi|324993471|gb|EGC25391.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK405]
 gi|327458834|gb|EGF05182.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1057]
          Length = 287

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 84/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +    +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVFAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K + I S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEDIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I +     R D    +        + +   +   ++     + P     I  G  + 
Sbjct: 192 IQQILSNLNDGRTDYKIFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|300868202|ref|ZP_07112834.1| Polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
 gi|300333826|emb|CBN58018.1| Polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
          Length = 478

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 67/207 (32%), Gaps = 18/207 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDF 63
           + +   +     + ++ +           L    +     +       +  +  GFDVD 
Sbjct: 1   MVVAIAVAFSLIAIASYSQT-----ANKTLTMATSPDYPPYEFKDTAVSGNEIIGFDVDI 55

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + ++  +      I    ++      ALQ+ + D +      T  R+    + F  + Y
Sbjct: 56  AKYITKELGYQFQIIG---MDFNGLIPALQAGRADFVMAGMTPTPERKK--NVDFSDLYY 110

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                 + +K   ++    L+G  + VQ G+  +  +             +   ++ +I 
Sbjct: 111 EAQNTIVANKGSKLTKPEDLAGKKVGVQLGSIQQEAVKKMA-----GVEVVSLNKIADII 165

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDR 210
              +++R  A   + +       +N  
Sbjct: 166 QEVKSNRLTAGIIEDTVAKGYAESNPD 192


>gi|15964316|ref|NP_384669.1| putative periplasmic binding ABC transporter protein [Sinorhizobium
           meliloti 1021]
 gi|307307052|ref|ZP_07586791.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|15073493|emb|CAC45135.1| Putative periplasmic binding ABC transporter [Sinorhizobium
           meliloti 1021]
 gi|306901992|gb|EFN32591.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 260

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 21/245 (8%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K GI       F    A+G+W+G++++F +A+ +    D       P+       AL S
Sbjct: 27  VKVGIAAEPYPPFTSPDASGNWEGWEIEFMKAMCAEAKLD---CVVTPVAWDGIIPALTS 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ID++  +   T  R  +  + F    Y    G I  K   I  +   L+G +I VQ  
Sbjct: 84  KKIDMIIGSMSITAERLKT--IDFSDKYYNTPTGIIGAKGDDIKPTPEGLAGKTIGVQVS 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +     +F           ++  +E +    A R DA   D  AL A   ++     
Sbjct: 142 TVHQAYAMKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALDAFLKSDQGKQC 199

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                ++          +   + +G+TE    V+    A+             +  SK  
Sbjct: 200 CDYKGEVAEDVDVIGPGVGVGLRKGETELKEKVNAAIKAIRE-------NGTYDAFSKKY 252

Query: 269 TNPDV 273
            + D+
Sbjct: 253 FDFDI 257


>gi|323492179|ref|ZP_08097337.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           brasiliensis LMG 20546]
 gi|323313492|gb|EGA66598.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           brasiliensis LMG 20546]
          Length = 257

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 79/251 (31%), Gaps = 26/251 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I C   L  T                 ++   +     F  +  NG   GFD
Sbjct: 1   MNK-MLSAIACAATLLATPVVA-----------KEVRLASDFTYPPFNYMDTNGKPVGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL +       K  ++         +L +++ D++  +   T  R+    + F  
Sbjct: 49  IEIADALCAEA---QLKCTWVSQAWDSLIPSLLARKSDVIMASMRITEERKK--RILFTN 103

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+      I+ + S++ G  I VQ+GT  +  + D F           +   
Sbjct: 104 KYYQTPARFVAKTGSDIALTQSEMKGKVIGVQSGTIHDRYVTDKF---GDVAEIKRYSGQ 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E+       R D   G+   L    L  +       +   ++         A A+ Q D
Sbjct: 161 DEVYIDMNNGRLDVTFGNSDQLALAFLDKEIGQGFEFIGKPVTDKAYIGEGTALALRQQD 220

Query: 235 TEWYNIVSWTH 245
                  +   
Sbjct: 221 KALAEKFNQAI 231


>gi|261821247|ref|YP_003259353.1| cationic amino acid ABC transporter periplasmic protein
           [Pectobacterium wasabiae WPP163]
 gi|261605260|gb|ACX87746.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pectobacterium wasabiae WPP163]
          Length = 243

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I+  +       +  A           ++         F  V AN   +GFD
Sbjct: 1   MKK----LIVAALFAAGAVSANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +   +           L+ ++ + +    D T  R     ++F  
Sbjct: 48  IDLANALCKEM---QANCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFSQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L+G  + VQ GTT +  L       +     + ++  +
Sbjct: 103 PYYDNAALFIAQKG-KVADVAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      N+        +         L  A+ Q + E  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNNTLASVGESVTDKGYFGIGLGIAVRQNNDELL 217

Query: 239 NIVSWTHY 246
              +    
Sbjct: 218 KKFNDALN 225


>gi|309390082|gb|ADO77962.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 244

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 85/246 (34%), Gaps = 21/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++ L +L  +S                   G N     F  V+A G+  GFD
Sbjct: 1   MKKTLVTILVVLTVLTLSSGVMAQ----------RYVVGTNASFPPFEYVEA-GEIVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++        ++++  L+       L S  +D+++     +  R+    ++F  
Sbjct: 50  IDIVKAIAD---LQGFEVEFRDLSFDSLVPGLASGSLDLVAAGMTISEQRKKV--VSFSE 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
             Y   Q  ++H+              I VQ GTT +  + +     ++       ++  
Sbjct: 105 PYYSANQSVLVHQDSEEDLTVLFGDNDIGVQTGTTGDAWVRNKLIKADILTGEIRNYDSF 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +         DA   D     A   + + P    ++ ++I+      A+ + + E   
Sbjct: 165 VFVIRDLANKNIDAAVLDKP--VAETYSKNNPV--KVVAEVITGEEYGIAVSKNNEELRQ 220

Query: 240 IVSWTH 245
            ++   
Sbjct: 221 KLNEGL 226


>gi|22125502|ref|NP_668925.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia pestis KIM 10]
 gi|45442179|ref|NP_993718.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia pestis biovar Microtus str.
           91001]
 gi|21958398|gb|AAM85176.1|AE013763_10 histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia pestis KIM 10]
 gi|45437043|gb|AAS62595.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia pestis biovar Microtus str.
           91001]
          Length = 351

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G +     F    ++G+  GFD+D  + L   I    +K  ++  +      +L+
Sbjct: 117 KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 173

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           +K++D +  +   T  R+  +   F    +      I  K   I  ++  L G  + V  
Sbjct: 174 AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 231

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T E      ++   +    + ++  + I A   + R DA   D  A     L      
Sbjct: 232 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 289

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
           +++     +             + + D E    ++        AE         +Q +K 
Sbjct: 290 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 342

Query: 268 TTNPDV 273
             + DV
Sbjct: 343 YFDFDV 348


>gi|313498470|gb|ADR59836.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1]
          Length = 250

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V A+    GFDVD   AL   +  +      +  + +    AL +
Sbjct: 23  TLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153
           ++ D +  +   T  R     +AF    Y       + K   I S      G ++  Q+ 
Sbjct: 80  RKYDAVVASMIDTEERRK--KIAFTEHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T  +   D +          ++  ++E +A   A R D    D   L+     N     
Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGDCC 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++     +K+  A A+ + D      ++    
Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228


>gi|298290193|ref|YP_003692132.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296926704|gb|ADH87513.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 266

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 18/254 (7%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M  +    +   ++        S   NA  L  +K  G L          F+    +G  
Sbjct: 1   MRLNLLPVLAAALVGGLVTGGLSAPANAQQLELVK-PGALLVATEGTYPPFSMRTPDGQL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G ++   + ++  +      +       +   + L + Q D  S   D T  R+    +
Sbjct: 60  DGLEIRVAKEIARRLNLTYEPVVIK---WEALLVGLAADQYDFASAAMDITAERQK--QV 114

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G   +  K   I + + + G ++ V   +T +    +             +
Sbjct: 115 MFADGWLESGGRVVTQKGSPIKTPADIKGKTVGVLVSSTWQKLAEE------RGATVKAY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        + DA   D  A       +  P   V++ D +S         +G   
Sbjct: 169 KAESDAIQDLVNGQIDAVITDSIAAAYAIEASKLP--LVMVDDYLSHIQKGFPFKKGKPN 226

Query: 237 WYNIVSWTHYAMVT 250
               V+     M+ 
Sbjct: 227 LVKAVNKALADMIA 240


>gi|85058514|ref|YP_454216.1| amino-acid ABC transporter periplasmic component [Sodalis
           glossinidius str. 'morsitans']
 gi|84779034|dbj|BAE73811.1| amino-acid ABC transporter periplasmic component [Sodalis
           glossinidius str. 'morsitans']
          Length = 256

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 71/246 (28%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L   + F  + +  A  L  IK  G +  G       +          GFD
Sbjct: 1   MKKITL-ALLFSTLAFTAAQAVAADDLAAIKSSGTITFGTEGTYAPYTFHDEIDKLVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA++  +       +++          L  K+ D +      T  R+      F  
Sbjct: 60  VDLGRAVAQKLGVKA---KFIEGRWDGLIAGLDGKRYDAVINQVGITPERQA--KYDFSK 114

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I       I + S L G     Q+ T+    LA  + A       +  +  
Sbjct: 115 PYIDSKVVLITRDDNTTIKNFSDLKGQKSA-QSLTSNYSQLASKYGA-----DIVPTDSF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R  A   D  +    K         V   +  +  P    + +  T   +
Sbjct: 169 TQSIGLVITGRAAATFNDNLSFLDFKKHQPNVKVKVAASEPANA-PSGILVRKNQTALVD 227

Query: 240 IVSWTH 245
            ++   
Sbjct: 228 AINKAL 233


>gi|156977166|ref|YP_001448072.1| ABC amino acid transporter periplasmic ligand binding protein
           [Vibrio harveyi ATCC BAA-1116]
 gi|156528760|gb|ABU73845.1| hypothetical protein VIBHAR_05952 [Vibrio harveyi ATCC BAA-1116]
          Length = 272

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 11/251 (4%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L L I   +  +  A+   +  IK+RG L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKATITALLGLAIALPSLANEEAATSNVEQIKERGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L++       K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAADSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G     +K+            S  V+             +    K   + F
Sbjct: 115 LFTEPYSHSGVQVAANKELAEGFSEFSDFNSRRVKIAARRGAFTVQVARETFPKAKILQF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +           A            + +      +   + +SK   A A+  G+ +
Sbjct: 175 DDDAQAFQEVLNGNAHAVIASSPRPEHEAIEHADKL-FIPFSERLSKGNEAFAVRLGEED 233

Query: 237 WYNIVSWTHYA 247
                +    A
Sbjct: 234 KKAFFNQWIEA 244


>gi|261250663|ref|ZP_05943238.1| cyclohexadienyl dehydratase [Vibrio orientalis CIP 102891]
 gi|260939232|gb|EEX95219.1| cyclohexadienyl dehydratase [Vibrio orientalis CIP 102891]
          Length = 258

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L + +L   + +   S L +I  +G L+ G                 ++GF
Sbjct: 1   MKKLML--ALGMTLLAMANVANAESRLHEILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     +Q+ + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVSGIQADKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  S        +    GT  E  +  +F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWSDFDNADIKVAATLGTVQEKMVKAFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLDQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|186473023|ref|YP_001860365.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184195355|gb|ACC73319.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 257

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 85/249 (34%), Gaps = 20/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +  L      +F+         +    ++ GI+           +G  KGFD
Sbjct: 1   MKTPLILLLAALGFACHGAFA---------RDNDTIRLGIDPTYPPMDAKAPDGSLKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   I    ++ +++ L       ALQ+++ID +  +   T  RE    + F  
Sbjct: 52  VDLGNEICKRI---RARCEWVELEFSGMIPALQARKIDAIMSSMAITAKREE--QILFSS 106

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +      +  +  G++    + L+G  I VQ GT  E     ++       H + ++ 
Sbjct: 107 KLFQFNSRLVAKQGSGLNGSAPATLAGKQIGVQTGTQFESFAQSHWAPAG--VHVVAYKG 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTE 236
            +E+ +     R D             L   +   +  + +   +    +   + + +T 
Sbjct: 165 QDEVFSDLVNGRLDGALLGTVEADYGFLRTPQGKGYSFVGEPLDMGDRGVGIGMRKDETA 224

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 225 LQTSINTAI 233


>gi|261251728|ref|ZP_05944302.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
 gi|260938601|gb|EEX94589.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
          Length = 279

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 21/255 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K F  +I  L+ L  +  S  +    L  I  RG L+ G++T  V +A     GD  GF+
Sbjct: 12  KRFKATITALLGLAISLPSIASETPNLDKINDRGTLRVGMST-FVPWAMRDRQGDLIGFE 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L+         ++++P        AL +++ D++      T  R     + F  
Sbjct: 71  IDVAKRLAKDSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSITPERAK--SVLFTS 125

Query: 121 ITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                G     +K+        S        I  + G  T     + F         + F
Sbjct: 126 PYSHSGVQIAANKELASGFSEFSDFDSRRIKIAARRGAHTVQVARETFPKAK----ILQF 181

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +           A            + N      +   + +SK   A A+  G+ +
Sbjct: 182 DDDAQAFQEVLNGNAHAVIASSPKPEHETVKNSDKL-FIPFTERLSKGNEAFAVRLGEAD 240

Query: 237 WYNIVSWTHYAMVTA 251
                     A + A
Sbjct: 241 KEAF----FNAWIQA 251


>gi|260462847|ref|ZP_05811052.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259031491|gb|EEW32762.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 266

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 23/252 (9%)

Query: 30  IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + K   +K G+       F    A+G W G++++F  A+ +    D       P+     
Sbjct: 21  VAKADPVKIGVAAEPYPPFTSPDASGKWVGWEIEFIDAVCAEEKLD---CVITPVAWDGI 77

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGAS 147
             AL +K+ID++  +   T  RE +  + F    Y      I  K +   S    L G  
Sbjct: 78  IPALTTKKIDLIVSSMSITAEREKT--IDFSDKYYNTPTAIIGPKDQKFGSTPEDLKGKV 135

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ  T   +    +F A         ++  +E +    A R DA   D S      L 
Sbjct: 136 VGVQVSTVHAVYAKKHFGA--TASEIKEYQTQDEANNDLAAGRLDAVQAD-SIALGEFLK 192

Query: 208 NDRPSE-----HVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           +D+         ++ PD     P +   + + DT+    ++    A+    +        
Sbjct: 193 SDQGKACCDLKGMVAPDDEVLGPGVGAGVRKEDTDLKEKINAGIKAIRANGKY------- 245

Query: 262 NQVSKDTTNPDV 273
           +++SK   + D+
Sbjct: 246 DEISKKYFDFDI 257


>gi|169342350|ref|ZP_02863417.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens C str. JGS1495]
 gi|182625722|ref|ZP_02953490.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens D str. JGS1721]
 gi|169299575|gb|EDS81638.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens C str. JGS1495]
 gi|177908984|gb|EDT71466.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens D str. JGS1721]
          Length = 278

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 96/291 (32%), Gaps = 32/291 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K+ F     V+++  + L              ++  +  IK+ G L  G++     + 
Sbjct: 1   MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSSDKVAKIKESGKLVVGLSADYAPYE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+D  + ++  +  D   ++   +       ++++  ID+      
Sbjct: 61  FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163
            T   +    + F  I Y   QG +++K     I  +  L G  +  Q G+         
Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGSIQAEI---- 171

Query: 164 FKAHNMKYHPIVFERV-EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             A+ ++   +        +    +  + DA   ++    A   +       V    I +
Sbjct: 172 --ANGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKN 227

Query: 223 KS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
                A AI +G+ +  + V+ T   +    ++     +  ++       +
Sbjct: 228 SEGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278


>gi|1943541|pdb|1GGG|A Chain A, Glutamine Binding Protein Open Ligand-Free Structure
 gi|1943542|pdb|1GGG|B Chain B, Glutamine Binding Protein Open Ligand-Free Structure
 gi|3212630|pdb|1WDN|A Chain A, Glutamine-Binding Protein
          Length = 226

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 76/216 (35%), Gaps = 12/216 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   + +  + GFDVD   A++  +  D       P++      A
Sbjct: 1   ADKKLVVATDTAFVPFEFKQGDL-YVGFDVDLWAAIAKELKLDYE---LKPMDFSGIIPA 56

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+K +D+       T  R+    + F    Y  G   ++      + SV  L G  + V
Sbjct: 57  LQTKNVDLALAGITITDERKK--AIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAV 114

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +     DY KA+        F  ++        +R DA   D   +     T   
Sbjct: 115 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGN 170

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   + D +       A  +G  E  + V+    
Sbjct: 171 G-QFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALK 205


>gi|322385751|ref|ZP_08059395.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus cristatus ATCC 51100]
 gi|321270489|gb|EFX53405.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus cristatus ATCC 51100]
          Length = 282

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 8/223 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
                 +++  +  G +   V     + +G + GFD+D   A+         K+++ P++
Sbjct: 32  DNWSKYEEKKQITIGFDNTFVPMGFEQKDGTYAGFDIDLANAVFEEYG---IKVKWQPID 88

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              +   L +  ID++      T  R     + F      + Q  +  K   IS  S + 
Sbjct: 89  WDMKETELTNGTIDLIWNGYSATDER--REKVEFTIPYMKNEQVLVSKKSSHISQASDMV 146

Query: 145 GASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           G  +  QAG++  +      +  K     +    ++   E     +  R D    D    
Sbjct: 147 GKVLGAQAGSSGYVAFESNPEILKTIVKNHTATQYQSFNEALIDLQNDRIDGLLIDRVYA 206

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                      ++ +          A    + D      V+  
Sbjct: 207 NYYLTEEGILDQYSVFSVGFESEDFAVGARKADRTLVEKVNAA 249


>gi|311071034|ref|YP_003975957.1| putative ABC transporter binding lipoprotein [Bacillus atrophaeus
           1942]
 gi|310871551|gb|ADP35026.1| putative ABC transporter (binding lipoprotein) [Bacillus atrophaeus
           1942]
          Length = 264

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 80/248 (32%), Gaps = 16/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L+ +     + N+    D K    L  G       FA    +G   GFD
Sbjct: 3   MKKWTLLFVAALLAVLSACGNGNSR---DNKDDKVLHVGATGQSYPFAYK-EDGKLTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +     K+ +  L        LQ+ ++D +S     T  R+      F  
Sbjct: 59  VEVMEAVAKKL---DMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTDERKEV--YNFTE 113

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++      I SV  L G ++    G+     L        +  +   +E  
Sbjct: 114 PYSYAGTQIVVKDDNKDIKSVDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYETQ 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237
           E         R DAY    S L A       P    +  D I    +A    + D   + 
Sbjct: 172 EGTLKDVAYGRVDAYVNSRSVLLAQIKKTGLP--LKLAGDPIVYEQVAFPFAKDDAHDKI 229

Query: 238 YNIVSWTH 245
              V+   
Sbjct: 230 RKKVNKAL 237


>gi|13474337|ref|NP_105905.1| amino acid ABC transporter, binding protein [Mesorhizobium loti
           MAFF303099]
 gi|14025090|dbj|BAB51691.1| amino acid ABC transporter, binding protein [Mesorhizobium loti
           MAFF303099]
          Length = 265

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 94/252 (37%), Gaps = 23/252 (9%)

Query: 30  IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + K   +K G+       F    A+G W G+++DF  A+ +    D       P+     
Sbjct: 21  VAKADPVKIGVAAEPYPPFTSPDASGKWVGWEIDFIDAVCAEEKLD---CVITPVAWDGI 77

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGAS 147
             AL +K+ID++  +   T  R+ +  + F    Y      I  K +   ++   L G  
Sbjct: 78  IPALTTKKIDLIVSSMSITDERKKT--IDFSDKYYNTPTAIIGPKDQKFGATPDDLKGKV 135

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ  T   +    +F +         ++  +E +    A R DA   D S      L 
Sbjct: 136 VGVQVSTVHAVYAKKHFGS--TASEIKEYQTQDEANQDLAAGRLDAVQAD-SIALGEFLK 192

Query: 208 NDRPSE-----HVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           +D+         ++ PD     P +   + + DT+    ++    A+        +    
Sbjct: 193 SDQGKACCDLKGMVAPDDEVLGPGVGAGVRKEDTDLKEKINAGIKAI-------RSNGKY 245

Query: 262 NQVSKDTTNPDV 273
           +++SK   + D+
Sbjct: 246 DEISKKYFDFDI 257


>gi|229514205|ref|ZP_04403666.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae TMA 21]
 gi|229348185|gb|EEO13143.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae TMA 21]
          Length = 256

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 14  MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 61  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 116 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEEL----SDVVAVPYSSYQ 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 227

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 228 ALLDQLNAALEAVKENGEYA 247


>gi|251788345|ref|YP_003003066.1| Prephenate dehydratase [Dickeya zeae Ech1591]
 gi|247536966|gb|ACT05587.1| Prephenate dehydratase [Dickeya zeae Ech1591]
          Length = 255

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 82/257 (31%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + +L    L     +  AS L  +++RG LK         +  ++A+ D++G D
Sbjct: 1   MKKRFSLMLL----LGLAGSAGAASHLDQVQERGVLKVCTTGDYKPYTSLRADSDYEGID 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   R+L+ ++      ++++  + K      QS Q DI       TL R+     +   
Sbjct: 57  IAMARSLAKSLGVK---VEWVKTSWKTLMPDFQSGQCDIAMGGISVTLERQKKAVFSNTL 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178
                        K    +V Q++  S+ V      T E  +  Y          +    
Sbjct: 114 DVDGKIPLVRCDDKDKYQTVEQINQPSVRVIEPAGGTNEAFVHAYLPKA-----SLALHD 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I       + D    D S     +    +         +      A  + + D  W 
Sbjct: 169 NVTIFQQLVDKQADVMITDASEALYQQKRYPQLCAVNPASPMQYGE-KAYMLPRDDMSWK 227

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +   +  E  
Sbjct: 228 LYVDQWLHLSKSTGEYR 244


>gi|226313306|ref|YP_002773200.1| arginine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226096254|dbj|BAH44696.1| arginine ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 268

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 81/268 (30%), Gaps = 22/268 (8%)

Query: 1   MY--KDF----FVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEV 50
           M   K F      S+L  +++         +           +  L    +     +   
Sbjct: 1   MKNTKSFISLALTSMLAAVVIAGCGTGNQTATGQAPAPSAGDKKTLVMVTSADYKPYEYH 60

Query: 51  K---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                  +  GFD+D  + ++  +  +   +Q   +N      ALQ+ + D +      T
Sbjct: 61  DLSSGKDEIVGFDIDIAKYIAKELGYE---LQINDMNFDGLIPALQTNRADFVMAGMTAT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             RE      F  I Y      +  K   ++   QL+G  + VQ G+  E    +  K  
Sbjct: 118 PEREK--NADFSTIYYDAKNTIVAKKDSNLTKPEQLAGKKVAVQLGSIQEGAARELAKTV 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                     ++ EI    +A R DA   + +            S      +   K+  A
Sbjct: 176 -SGLQITSLNKLPEIVEEVKAGRVDAAIIEDTVAKGFVAN--NDSLQFTTMEENEKNGSA 232

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A  +G        +     M    E+ 
Sbjct: 233 VAFPKGSPHVQKF-NEVIKKMQENGEMD 259


>gi|330960460|gb|EGH60720.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. maculicola str. ES4326]
          Length = 258

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 81/246 (32%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGALALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +  S+++L G  I VQ G+  E    +      +   P  +   
Sbjct: 106 KYYNSPARLVMKDGTTVSDSLAELKGKKIGVQRGSIHERFAREVLAPQGVVVTP--YGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +  +       P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDAGKGYAFVG-PSFADPKYFGDGIGIAVRKG 222

Query: 234 DTEWYN 239
           D    +
Sbjct: 223 DKANLD 228


>gi|153832969|ref|ZP_01985636.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi HY01]
 gi|148870690|gb|EDL69596.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi HY01]
          Length = 272

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 19/255 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L L I   +  +  A+   +  IK+ G L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKATITALLGLAIALPSLANEEAATPNVDQIKEHGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L++       K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAADSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F       G     +K+        S        I  + G  T     + F        
Sbjct: 115 LFTEPYSHSGVQVAANKELAEGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F+   +           A            + +      +   + +SK   A A+  
Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKHADKL-FIPFSERLSKGNEAFAVRL 229

Query: 233 GDTEWYNIVSWTHYA 247
           G+ +     +    A
Sbjct: 230 GEEDKKAFFNQWIEA 244


>gi|330431658|gb|AEC16717.1| glutamine ABC transporter periplasmic protein [Gallibacterium
           anatis UMN179]
          Length = 240

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 83/259 (32%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+     LF  + + NA           +   +      F      G+  GFD
Sbjct: 1   MKKVLLASL-----LFGAAVAANAQT---------ITFAMEPTYPPFENTNEKGEIVGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I  D    ++   +       L+ K+ D      D T  R     ++F  
Sbjct: 47  VDVANAICKEIKAD---CKFSSQSFDSLIAGLKFKRFDAAISAIDITPERAK--QVSFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     F+  K+      +     ++ VQ GTT +  +A   K    +Y    +  ++
Sbjct: 102 PYYDSSASFVAAKEGITLENA----KNVGVQNGTTFQQYIAAKAK----QYSSKPYSTLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + L          + H +   +         L  A+ + +TE
Sbjct: 154 NAILDLKNGRIDIIFGDTAVLAEWI--KSDKAVHFVGDKVTDPEYFGTGLGIAVNKKNTE 211

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 212 LLGQLNQGLKAIKANGEYQ 230


>gi|327469096|gb|EGF14568.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK330]
 gi|328945645|gb|EGG39796.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1087]
          Length = 287

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+ K   I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDKPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +       ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKIFER-ITVESIIKDQGLDNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|237806948|ref|YP_002891388.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
 gi|237499209|gb|ACQ91802.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
          Length = 277

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 78/261 (29%), Gaps = 21/261 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK     +L    +  +  S     L  IK+RG L   ++     ++ +    +  G DV
Sbjct: 4   YKTLQTLLLLAGSVTISHASVAGETLDRIKERGELIGVMDQAYPPYSFLNDKNEMDGMDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +  +  +       +      +         + DI   +      R     L F   
Sbjct: 64  DLTKEFARRLGVKA---KIETPAWEVTTAGNWRGRWDICICSMTPDAQRAR--SLDFVTH 118

Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y      +       ++ ++ + G  I  Q G + E  L    K       P+ +    
Sbjct: 119 YYSSPAVLVTSVNGNPLTKLADMEGKKIAAQQGGSYERYLNQTLKMEGYGAKPVTYPFKA 178

Query: 181 EIDAAYRA-------------HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                Y +              R D    ++            P +  I+ + + + P  
Sbjct: 179 VQVMPYGSEDLEYQDLSLGAGKRIDGLVSNLVTANERISKM--PGKFKIVGEPLFEDPNW 236

Query: 228 PAIIQGDTEWYNIVSWTHYAM 248
            AI +GD EW + V      M
Sbjct: 237 VAIDKGDKEWRDTVVKIFDDM 257


>gi|313668733|ref|YP_004049017.1| amino acid permease substrate-binding protein [Neisseria lactamica
           ST-640]
 gi|313006195|emb|CBN87657.1| putative amino acid permease substrate-binding protein [Neisseria
           lactamica 020-06]
          Length = 275

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46
           M + F +  +  ++L                   + + S++  I  +G +  G       
Sbjct: 2   MLEKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S++ + G        +          KA
Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 172 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|269797422|ref|YP_003311322.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
 gi|269094051|gb|ACZ24042.1| extracellular solute-binding protein family 3 [Veillonella parvula
           DSM 2008]
          Length = 261

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 94/321 (29%), Gaps = 67/321 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M      ++L    +  +          +   +   + G +     F      +G   GF
Sbjct: 1   MKFKKIAALLGAFTIASSLLIAGCG--KEGNSQKAWRVGTDATYAPFGFKDKDSGKLAGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+++    +        LN      ALQS  IDI   +   +  R     + F 
Sbjct: 59  DIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--SVDFS 113

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G G +++     I+S   L G  I V  G+T     +    A   +++ IV   
Sbjct: 114 KPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVRQFNIIV--- 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +    D    D            +     +  +    +PL  A+ +G+TE  
Sbjct: 171 --DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNTELL 227

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N ++                                               GL K     
Sbjct: 228 NKIND----------------------------------------------GLAK----- 236

Query: 299 IIRHMGNYGEMFDRNLGNQSE 319
            I+  G Y E++ +  G +  
Sbjct: 237 -IKANGKYAEIYKKWFGKEPP 256


>gi|229815592|ref|ZP_04445919.1| hypothetical protein COLINT_02643 [Collinsella intestinalis DSM
           13280]
 gi|229808822|gb|EEP44597.1| hypothetical protein COLINT_02643 [Collinsella intestinalis DSM
           13280]
          Length = 276

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 93/269 (34%), Gaps = 36/269 (13%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILG----------------DIKKRGFLKCGINTG 43
           M K  F  +   L I    +                          + + G    G +  
Sbjct: 1   MKKKLFGATAATLAIAGALALVGCGGSQDPAAGSAAGKAGDDAAYTLVEDGTFTIGTSAE 60

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK-QIDILSR 102
              F  +  +G++KGFD++    ++  +  D    + + ++      A+ S  ++D    
Sbjct: 61  YEPFEYM-EDGEYKGFDLELAELIADDLDLD---FEIVNMDFDGLCAAVASGTKMDAAFG 116

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTT 156
               T  RE    + F    Y D Q  +  K          +    + G  I VQ+G+T 
Sbjct: 117 AITITPKREK--QVDFTDSYYMDDQAIVTMKDNADITGDNYADALNVEGVKIAVQSGSTA 174

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E+ + + F         + F+   +  AA ++++  A   + S   A +LT        +
Sbjct: 175 EVFVNENFPEA----TAVPFKNATDCFAALQSNQAVALVTNRS--VAAQLTASSFDNEQV 228

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +  I +    A A+ + +    + ++ T 
Sbjct: 229 IKLISTGEEYAIAVSKDNPGLKDAINETL 257


>gi|262041414|ref|ZP_06014617.1| histidine ABC superfamily ATP binding cassette transporter, binding
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041208|gb|EEW42276.1| histidine ABC superfamily ATP binding cassette transporter, binding
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 258

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 80/258 (31%), Gaps = 25/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  +      +                ++ G++     F      G   GFD
Sbjct: 1   MKKSLLLWLALMASTSALAEGG-----------KEIRFGVDPTFAPFEWKDPQGKLAGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++  N      AL++++ D +      T  R+  +   F  
Sbjct: 50  IDLGNAICQQL---QAKCVWVESNFDGIIPALKARKFDAILSGMYMTEKRKAQIA--FSD 104

Query: 121 I-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                             ++  QL G +I V+ G+  E  +  +++   +  + + ++  
Sbjct: 105 KLYNGPVFLVARKNTLQGNTPEQLKGKTIDVEQGSAQETYVNQHWRPQGI--NIVAYQGA 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     +   D             L   +  E   +   +    L     A  + + D
Sbjct: 163 DSVVRDLESGSIDGAVLSGMMADYSFLQQPQGKEFAFVGGHLQDDTLFGAGAAIGLRKDD 222

Query: 235 TEWYNIVSWTHYAMVTAE 252
                 ++    A + A+
Sbjct: 223 EALRQEINGAI-AKILAD 239


>gi|157963211|ref|YP_001503245.1| extracellular solute-binding protein [Shewanella pealeana ATCC
           700345]
 gi|157848211|gb|ABV88710.1| extracellular solute-binding protein family 3 [Shewanella pealeana
           ATCC 700345]
          Length = 245

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 80/250 (32%), Gaps = 28/250 (11%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANG-DW 56
           M K   V  S+     L  T            K    L  G N     F  V  A+G + 
Sbjct: 1   MKKSVLVVASLGLTGALMLTGCG---------KSDDVLVVGTNASFPPFEYVGGASGDEI 51

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  + ++         ++   +N     +AL + ++D ++     T  R+    +
Sbjct: 52  MGFDIDLAKQIAKDAGK---TLKVENMNFDSLIVALNAGKVDFIASGMTITPERQA--SV 106

Query: 117 AFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F  P         +      I+S+  L G  I VQ G+T +        A +       
Sbjct: 107 DFSEPYYEATQMVLVNKDNNSINSLDDLKGKHIAVQLGSTGD------IMAKSYSQQVTA 160

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    E     +  + D    D           ++  +  ++    S      A+ +   
Sbjct: 161 FNSGFEAVMELKNAKVDLVLFD---SEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKV 217

Query: 236 EWYNIVSWTH 245
           E  N ++ + 
Sbjct: 218 ELLNSINSSL 227


>gi|300742153|ref|ZP_07072174.1| putative amino acid ABC transporter [Rothia dentocariosa M567]
 gi|300381338|gb|EFJ77900.1| putative amino acid ABC transporter [Rothia dentocariosa M567]
          Length = 294

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 11/223 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G L    NT  + F   + NG   G D D   A++  +  +            +    L
Sbjct: 61  NGVLTVCTNTPYMPFEY-EENGKIVGIDADIANAIAKDLGAEAQLTSISF-EGLDSGTGL 118

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            S Q DI       T  R+    + F  + + D Q  ++ K   ISSV  L  A +  Q 
Sbjct: 119 TSGQCDIALAGISVTDERKS--KMEFTDVYFEDNQAILVPKNSKISSVEDLKNAKVGAQQ 176

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T+ E    +           + +E  E + +A +  +  A + ++S +      +   S
Sbjct: 177 ATSGESYAKE------KGADVVQYEDNELMFSALKTGQVQAVSANLSVISEALTKDPD-S 229

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +      +   +A A+        +  + T   + ++ EL 
Sbjct: 230 FKIAYQTSENADQIAGAVAPEKKALLDKANKTIQQLKSSGELD 272


>gi|297517483|ref|ZP_06935869.1| glutamine ABC transporter periplasmic protein [Escherichia coli
           OP50]
          Length = 195

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 72/211 (34%), Gaps = 19/211 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  + L F   S  A           L    +T  V F   + +  + GFDVD
Sbjct: 2   KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +  D       P++      ALQ+K +D+       T  R+    + F    
Sbjct: 53  LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y  G   ++      + SV  L G  + V++GT +     DY KA+        F  ++ 
Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
                  +R DA   D   +     T     
Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNGQ 194


>gi|295115438|emb|CBL36285.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 300

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 14/210 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G N     +     +    G DV+   A+   +  D   +Q   +       AL S 
Sbjct: 85  LIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALVSD 140

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++D ++     T  RE    + F        Q  I+ +   I+SV  L+G  + VQ GTT
Sbjct: 141 KVDFVAAGMTVTPDREA--SVNFTDTYATAAQVIIVKEGSDIASVDDLAGKVVGVQLGTT 198

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +L +++             + +  E   +    + DA   D       K    +    V
Sbjct: 199 GDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDN---APAKNFVAQGEGLV 250

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           IL + +S    A A+ + +TE    ++   
Sbjct: 251 ILEEALSSEDYAMAVNKDNTELLEQINGAI 280


>gi|194436225|ref|ZP_03068327.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli 101-1]
 gi|194424953|gb|EDX40938.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia coli 101-1]
 gi|323961382|gb|EGB56993.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H489]
 gi|323973107|gb|EGB68300.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TA007]
          Length = 260

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 88/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  + V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        +   D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRTEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|254425157|ref|ZP_05038875.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
 gi|196192646|gb|EDX87610.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
          Length = 263

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 80/248 (32%), Gaps = 14/248 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVD 62
            F  S +  I       +       D    G     G       F  V  +G+ +GFD+D
Sbjct: 8   TFLKSAVLAICTAGLLVACGGGGGEDASDGGDVFSVGTEPAFPPFESVGDDGELQGFDID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RA+          +++  L       ALQ   ID        T  R  +  + F    
Sbjct: 68  LMRAIGEKAGK---TVEFESLPFDGLIPALQGASIDAAISGMTITEER--ADTVDFSDPY 122

Query: 123 YFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +  G    +      I+++  L G  I VQ GTT   T A   +A         F+    
Sbjct: 123 FKAGLAIAVAEGDTEINTLDDLEGKRIAVQIGTTGAETAAGVPEA-----EVSTFDSAPL 177

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                     DA   D  A      T + P    ++ +++++     A+ +G  +    V
Sbjct: 178 ALQELANGNVDAVVNDAPATLDAIATGNIPG-ITVVGELLTEEFYGIAMPKGSED-VETV 235

Query: 242 SWTHYAMV 249
           +     ++
Sbjct: 236 NTALSELI 243


>gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
 gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
          Length = 483

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 90/298 (30%), Gaps = 26/298 (8%)

Query: 2   YKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K  F      +L +I       + +A              G +     F    A+G++K
Sbjct: 5   KKSLFTIMTALLLTVIFTILLPTTASAQETDK-----TYIIGTDITFAPFEYKDADGEYK 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD   A++             PL       AL++ Q+D +      T  R       
Sbjct: 60  GIDVDLLEAIAKDQGFKYE---LRPLGFSAALQALETNQVDGMIAGMSITPER--QDSFD 114

Query: 118 FRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    +  G    +      I+S   L G ++ ++ GTT         + +    +   F
Sbjct: 115 FSEPYFESGVVMAVSADNDDITSYEDLEGKTVAIKVGTTGAAFAESIQEEYGFNVN--TF 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E    +    +    DA   D   +     +     +  I  D         A+ +G  +
Sbjct: 173 EDSANMYEDVQTGNSDAAFEDYPVMAYAIQS---GLKLKIPTDPEPGDNYGFAVNKG--Q 227

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF----LGIDKSSNIGEALG 290
              ++   +  ++     G     ++    +T+  +        L       + + LG
Sbjct: 228 NAELLEMFNNGLINIRANGTYDDILDTYLGETSQTETANLGFFGLIQQNGGELLKGLG 285


>gi|160894718|ref|ZP_02075493.1| hypothetical protein CLOL250_02269 [Clostridium sp. L2-50]
 gi|156863652|gb|EDO57083.1| hypothetical protein CLOL250_02269 [Clostridium sp. L2-50]
          Length = 317

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 84/251 (33%), Gaps = 21/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K   + ++ ++ L         S       L  +K++G    G+ T          +G
Sbjct: 55  MKKLVALVLVAVMGLSMVGCGKKDSSNDSKSDLEYVKEKGTFVVGV-TDFAPMDYKDDSG 113

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +W GFD D   A + +I        ++ ++   + + L  K ID +      T   E++ 
Sbjct: 114 NWIGFDADMASAFAESIGVKAE---FVEIDWDNKIMELDGKTIDCVWNGMTLTD--EVTS 168

Query: 115 GLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +A       + Q  I+   K     +V  +   +  V+AG+  E    D  K   + Y 
Sbjct: 169 SMACSDAYCNNAQVVIVPQDKADQYQTVDSIKELTFAVEAGSAGE----DQAKELGLNYT 224

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +   +      A   DA   D S + A  +       ++     ++         +
Sbjct: 225 AVKAQS--DALMEVAAGTSDAAIID-SLMAAAMVGEGTGYANLTYTVGLNSEEYGVGFRK 281

Query: 233 GDTEWYNIVSW 243
                  +  +
Sbjct: 282 DSDLAAELNKF 292


>gi|186472615|ref|YP_001859957.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia phymatum STM815]
 gi|184194947|gb|ACC72911.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia phymatum STM815]
          Length = 260

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    ++G   GFD+D    + + +    +K  ++  +      
Sbjct: 23  KDWTTIRFGVDASYPPFESKGSDGKLTGFDIDIGNEICARL---KAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K   I  +   LSG S+ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSNILPTAESLSGKSVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEPKG--AKVVPYQNQDQVYADLISGRLDAALQDAVQADIGFLKTP 195

Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R + +  +   +             + + DT+    +      ++
Sbjct: 196 RGAGYQFVGKDLEDKKILGEGAGIGMRKEDTDLKAKIDKAIADII 240


>gi|107022264|ref|YP_620591.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116689209|ref|YP_834832.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105892453|gb|ABF75618.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647298|gb|ABK07939.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 264

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G + +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     LT  +  
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 203 GFAFAGGTVSDTEILGSGVGFGLRKNDAALKTALDQALK 241


>gi|327473463|gb|EGF18883.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK408]
          Length = 287

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +   +   ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|281355807|ref|ZP_06242301.1| extracellular solute-binding protein family 3 [Victivallis vadensis
           ATCC BAA-548]
 gi|281318687|gb|EFB02707.1| extracellular solute-binding protein family 3 [Victivallis vadensis
           ATCC BAA-548]
          Length = 242

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 78/242 (32%), Gaps = 22/242 (9%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F  ++    +L     S         +    L          +   + +    G DVD 
Sbjct: 5   RFLKTLGAAAVLGAVLCSCG-------RSDNKLVMVAEATFPPYEFREGD-RIVGIDVDI 56

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  I  +   +    ++      A+QS + D+ +     T  R+    + F     
Sbjct: 57  MTEVAREIGKE---LVVEDMSFDSVISAVQSGKADVAASGITVTEDRKR--QIDFSVPYV 111

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              Q  I+     I     L G  I VQ GTT +  +            P  F       
Sbjct: 112 EARQVIIVPGNSAIKGRDDLKGKRIGVQHGTTGDAYVTKNI------QEPERFPNGALAV 165

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AA  A + D    D       K+  DR    +ILP+ ++    A AI +G+TE    V+ 
Sbjct: 166 AALNAGKIDVIVID---GEPAKIFADRHKNLLILPEPLTVEEYAIAIRKGNTELLEQVNR 222

Query: 244 TH 245
             
Sbjct: 223 VI 224


>gi|295681128|ref|YP_003609702.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295441023|gb|ADG20191.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 260

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 94/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        + L+ +   S           K+   ++ G++     F    A+G   GFD
Sbjct: 1   MKAMLATLTIALLAVSSASAIA--------KEWSTVRFGVDASYPPFESKAADGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K  ++  +      AL+ ++ D +      T  R+  +G  F  
Sbjct: 53  IDLGNEICRRL---NAKCVWIENSFDGMIPALKGRKFDGVLSTMSMTPARQAQIG--FSS 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   I  +   L G  I V+ G+  E     Y++        + ++  
Sbjct: 108 KVFRIPTRLVAKKGSPIEPTPEALKGRRIGVEQGSIQETYAKTYWQPAG--AVIVPYQDQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
           + + +   A R DA   +        L   R  +     + +  +       A  + + D
Sbjct: 166 DLVYSDLLAGRIDASLQNAVQADIGFLRTSRGKDFGFAGNPLYDAKTLGSGTAIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           T+    +     A + A+         ++++K   + DV
Sbjct: 226 TDLQEKIDKAI-ADIRAD------GTYDRIAKKYFDFDV 257


>gi|53723354|ref|YP_112339.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei K96243]
 gi|76818697|ref|YP_336644.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 1710b]
 gi|126457176|ref|YP_001077187.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 1106a]
 gi|134281791|ref|ZP_01768498.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 305]
 gi|167725482|ref|ZP_02408718.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei DM98]
 gi|167821597|ref|ZP_02453277.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 91]
 gi|167829941|ref|ZP_02461412.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 9]
 gi|167851398|ref|ZP_02476906.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei B7210]
 gi|167900040|ref|ZP_02487441.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 7894]
 gi|167908343|ref|ZP_02495548.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167916697|ref|ZP_02503788.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 112]
 gi|167924542|ref|ZP_02511633.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei BCC215]
 gi|226199303|ref|ZP_03794863.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|242313028|ref|ZP_04812045.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 1106b]
 gi|254182414|ref|ZP_04889008.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 1655]
 gi|254186971|ref|ZP_04893486.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254192568|ref|ZP_04899007.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei S13]
 gi|254265600|ref|ZP_04956465.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 1710a]
 gi|254296639|ref|ZP_04964095.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 406e]
 gi|52213768|emb|CAH39823.1| glutamine-binding periplasmic protein precursor [Burkholderia
           pseudomallei K96243]
 gi|76583170|gb|ABA52644.1| glutamine-binding periplasmic protein precursor [Burkholderia
           pseudomallei 1710b]
 gi|126230944|gb|ABN94357.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|134246853|gb|EBA46940.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 305]
 gi|157806490|gb|EDO83660.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 406e]
 gi|157934654|gb|EDO90324.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|169649326|gb|EDS82019.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei S13]
 gi|184212949|gb|EDU09992.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 1655]
 gi|225928710|gb|EEH24737.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|242136267|gb|EES22670.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 1106b]
 gi|254216602|gb|EET05987.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 1710a]
          Length = 250

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 94/283 (33%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +I+ L ++  ++   +A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++          +  P++      ALQ++ ID+          R     + F   
Sbjct: 53  DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA     +      + N+      +    +S         +G       
Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248


>gi|51596929|ref|YP_071120.1| ABC tranporter, periplasmic histidine-binding protein hisJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|108808063|ref|YP_651979.1| histidine-binding periplasmic protein [Yersinia pestis Antiqua]
 gi|108812335|ref|YP_648102.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516]
 gi|145599265|ref|YP_001163341.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides F]
 gi|153949723|ref|YP_001400407.1| histidine ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|165925274|ref|ZP_02221106.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166214211|ref|ZP_02240246.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399286|ref|ZP_02304810.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167469031|ref|ZP_02333735.1| histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia pestis FV-1]
 gi|170023779|ref|YP_001720284.1| cationic amino acid ABC transporter periplasmic binding protein
           [Yersinia pseudotuberculosis YPIII]
 gi|186896009|ref|YP_001873121.1| cationic amino acid ABC transporter periplasmic binding protein
           [Yersinia pseudotuberculosis PB1/+]
 gi|229838346|ref|ZP_04458505.1| histidine-binding periplasmic protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895376|ref|ZP_04510549.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides A]
 gi|229898912|ref|ZP_04514057.1| histidine-binding periplasmic protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902688|ref|ZP_04517805.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516]
 gi|51590211|emb|CAH21848.1| ABC tranporter, periplasmic histidine-binding protein hisJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|108775983|gb|ABG18502.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516]
 gi|108779976|gb|ABG14034.1| histidine-binding periplasmic protein [Yersinia pestis Antiqua]
 gi|145210961|gb|ABP40368.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides F]
 gi|152961218|gb|ABS48679.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|165922881|gb|EDR40032.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166204567|gb|EDR49047.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167051790|gb|EDR63198.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|169750313|gb|ACA67831.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis YPIII]
 gi|186699035|gb|ACC89664.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis PB1/+]
 gi|229680135|gb|EEO76234.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516]
 gi|229688460|gb|EEO80531.1| histidine-binding periplasmic protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694712|gb|EEO84759.1| histidine-binding periplasmic protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701684|gb|EEO89710.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides A]
 gi|262366629|gb|ACY63186.1| histidine-binding periplasmic protein [Yersinia pestis D182038]
 gi|320014576|gb|ADV98147.1| histidine-binding periplasmic protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 260

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G +     F    ++G+  GFD+D  + L   I    +K  ++  +      +L+
Sbjct: 26  KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           +K++D +  +   T  R+  +   F    +      I  K   I  ++  L G  + V  
Sbjct: 83  AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T E      ++   +    + ++  + I A   + R DA   D  A     L      
Sbjct: 141 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 198

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
           +++     +             + + D E    ++        AE         +Q +K 
Sbjct: 199 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 251

Query: 268 TTNPDV 273
             + DV
Sbjct: 252 YFDFDV 257


>gi|326318473|ref|YP_004236145.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375309|gb|ADX47578.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 300

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 9/232 (3%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
           F +++    +        +     IK+ G L+ G       F+ +   +G  +GFD    
Sbjct: 34  FDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLLNEKDGRMRGFDAGIA 93

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L+  I  D SK+Q+  + +  R   L + Q+D +      T  R     ++F    Y 
Sbjct: 94  QLLTRYILGDASKVQFTQVTSSTREQVLVNGQVDTVIATYSITPARAE--KISFAGPYYT 151

Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              G ++    + I S + L G  +  QAG+T    LA +            F+  +E  
Sbjct: 152 SQAGVLVKANNQAIQSYNDLGGKKVATQAGSTGPAILAQFAPK----STVQEFQTHQEAL 207

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            + R  R  AY  D + L    L+       +      ++ P    + +G  
Sbjct: 208 DSLRQGRVAAYVTDYTLLLNT-LSLGTGDAKLAGAPFGAQDPYGIGLPKGSD 258


>gi|288554809|ref|YP_003426744.1| putative ABC transporter binding lipoprotein [Bacillus pseudofirmus
           OF4]
 gi|288545969|gb|ADC49852.1| putative ABC transporter (binding lipoprotein) [Bacillus
           pseudofirmus OF4]
          Length = 295

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 28/271 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---------------------LGDIKKRGFLKCG 39
           M K   +    ++IL   +                              ++++ G L  G
Sbjct: 1   MKKLLSLMTALILILVLAACGATEDSEQDNEEVTDNEETTGESEDTSWTEVEESGKLVVG 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +           + +  GF+V+  + ++  +     +I++  ++      +L++ QID+
Sbjct: 61  TSGTYAPITYYNESNELTGFEVELVKEVADKLG---LEIEFNTMDFDGILPSLRNGQIDV 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
            + +   T  R+ +          +             S  + L G  + + + T+    
Sbjct: 118 AAHDFAITEERKETFDFVIPHKYSYGSVVVRAEDADRFSDANDLEGVDVALGSLTSNYAI 177

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
            AD   A+   Y        E I         DAY  D   L             V    
Sbjct: 178 FADNIGANGTAYD----GGTEAILRDVMNGNTDAYLNDRLVLQRTLDEFGDDRLVVADQV 233

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               +  A A+++G+T     +      ++ 
Sbjct: 234 KYHATESAMAVLKGNTALKEKLDEAVQELIE 264


>gi|326793481|ref|YP_004311301.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326544245|gb|ADZ89465.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 267

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 80/226 (35%), Gaps = 15/226 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   +    LI+    + +  A      +L DI+ R  ++  +      F  V  +  
Sbjct: 1   MKRLTQLLSKTLIVASSVAAAMTAMTAGADVLQDIQDRKEIRIAVPQDFPPFGSVGPDLK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G DVD    ++  +  D   ++ +P+ +  R   LQ+K++D++  +      RE    
Sbjct: 61  PQGIDVDMANYIADQLDVD---LKIVPVTSANRIPYLQTKKVDLVISSLGKNPEREK--A 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G        ++ ++ L+G ++ V  G+  +L L  Y        +   
Sbjct: 116 IDFTTPYAPFFLGVFGESSVDVTKMADLAGKTVGVTRGSVEDLELEKYAPK---SLNVRR 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPD 219
           FE       AY   +              A +     P    +L D
Sbjct: 173 FEDNNTTLTAYLTGQVKLIATGNLVATEIAKRQPQRAPETKFLLKD 218


>gi|313890875|ref|ZP_07824499.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120773|gb|EFR43888.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 275

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 85/250 (34%), Gaps = 11/250 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  F+SI  L+ L   +   N +   + K+   +          F+  + +G   G+DV
Sbjct: 5   KKVAFLSITALVALVLVACGHNKTTGTNGKE--TITFATVGTTAPFSY-EKSGHLTGYDV 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A+      D  ++ +        F  L S +  +   N  +T  R       F   
Sbjct: 62  EVAKAIFK--GSDKYQVNFKKTEWSSIFTGLDSSKYQMAGNNISYTKERAS--KYLFSYP 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE- 180
           T       ++ K   I S + +   S  V  GTTT   L D+ K ++     + +     
Sbjct: 118 TGTTPSVLVVPKDSDIKSYADIKNHSTQVVQGTTTAAQLEDFNKKNSSAQVKLKYTNENI 177

Query: 181 -EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238
            ++ +     + D    D   + A  + N        +P    + P       Q   +  
Sbjct: 178 TQMLSNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIPLESKEQPYIYFIFSQDQKDLQ 236

Query: 239 NIVSWTHYAM 248
           + V+    A+
Sbjct: 237 SFVNRRLKAL 246


>gi|206559452|ref|YP_002230213.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198035490|emb|CAR51368.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 264

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G + +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     LT  +  
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 203 GFAFAGGTVSDTEILGSGVGFGLRKNDAALKTALDQALK 241


>gi|330881451|gb|EGH15600.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 258

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 77/246 (31%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     I  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTVISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +          P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTIADATPLQDGFLKTDAGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222

Query: 234 DTEWYN 239
           D     
Sbjct: 223 DKANLE 228


>gi|319762272|ref|YP_004126209.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
 gi|317116833|gb|ADU99321.1| extracellular solute-binding protein family 3 [Alicycliphilus
           denitrificans BC]
          Length = 300

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 86/235 (36%), Gaps = 15/235 (6%)

Query: 9   ILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
                 L       +A+ +        IK+ G L+ G       F+ +   +G  +GFD 
Sbjct: 31  AAAFDALVAQGPVADAATIRSSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDA 90

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
              + ++  I  D +K ++  + +  R   L + Q+D++      T  R     ++F   
Sbjct: 91  GLAQLITRYILGDGAKYRFTQVTSSTREQVLINDQVDMVFATYSITPARAE--KISFAGP 148

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y    G ++      I S + L+G  +  QAG+T    LA Y            F+  +
Sbjct: 149 YYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYASKA----VVQEFQTHQ 204

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E   A R  R DAY  D + L    L+       +      ++ P    + +G  
Sbjct: 205 EALDALRQGRVDAYVTDYTLLL-NALSLGTGDARLAGAPFGAQDPYGVGLPKGSD 258


>gi|261364510|ref|ZP_05977393.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria mucosa ATCC 25996]
 gi|288567448|gb|EFC89008.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria mucosa ATCC 25996]
          Length = 274

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 64/224 (28%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--------------ASILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L                       S++  I  +G +  G       
Sbjct: 1   MLKKFVLGGMTALLLAACGGEGGSASSSAPAQSAGASGSLIERINNKGTITVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|168217959|ref|ZP_02643584.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens NCTC 8239]
 gi|182380009|gb|EDT77488.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens NCTC 8239]
          Length = 278

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 30/290 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K+ F     V+++  + L              +   +  IK+ G L  G++     + 
Sbjct: 1   MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+D  + ++  +  D   ++   +       ++++  ID+      
Sbjct: 61  FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163
            T   +    + F  I Y   QG +++K     I  +  L G  +  Q G+     +   
Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                      + + V  +    +  + DA   ++    A   +       V    I + 
Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228

Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               A AI +G+ +  + V+ T   +    ++     +  ++       +
Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278


>gi|167587595|ref|ZP_02379983.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 264

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KAKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I     G+  +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKAGSGLQPTPQSLKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +    +    + ++  +   A  ++ R DA   D  A     L+  + +
Sbjct: 145 GTIQESYAKKKWAPAGVD--VVPYQTQDLAYADLKSGRLDAAFQDSEAGAKGFLSKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 203 GFAFAGGTVSDAEILGTGVGFGLRKNDAALKTALDQALK 241


>gi|315653694|ref|ZP_07906614.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315489056|gb|EFU78698.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 498

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%)

Query: 1   MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49
           M K        ++ CL   +  F++ +  A     SIL  IK +  L  G +        
Sbjct: 7   MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 66

Query: 50  VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +        + G D++  + ++  +      +    ++     +AL+++++D++      
Sbjct: 67  IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 123

Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R+    + F  I Y           + +    S+    G  I  Q G+     +   
Sbjct: 124 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 181

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                   H     ++  +  A ++ +  A   +     A    ++ PS +    D+  K
Sbjct: 182 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 233

Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250
            P    A A+ +   +    V+ T   ++ 
Sbjct: 234 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 263


>gi|309804770|ref|ZP_07698834.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           09V1-c]
 gi|309806268|ref|ZP_07700281.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|312871595|ref|ZP_07731687.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|312871955|ref|ZP_07732037.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|312873247|ref|ZP_07733303.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|312874656|ref|ZP_07734680.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|325911684|ref|ZP_08174091.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325913019|ref|ZP_08175392.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|329921097|ref|ZP_08277620.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
 gi|308165880|gb|EFO68099.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           09V1-c]
 gi|308167252|gb|EFO69418.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|311089886|gb|EFQ48306.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311091258|gb|EFQ49646.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|311092532|gb|EFQ50894.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092820|gb|EFQ51172.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|325476450|gb|EGC79609.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325477699|gb|EGC80838.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|328935004|gb|EGG31493.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
          Length = 492

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%)

Query: 1   MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49
           M K        ++ CL   +  F++ +  A     SIL  IK +  L  G +        
Sbjct: 1   MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 60

Query: 50  VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +        + G D++  + ++  +      +    ++     +AL+++++D++      
Sbjct: 61  IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 117

Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R+    + F  I Y           + +    S+    G  I  Q G+     +   
Sbjct: 118 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                   H     ++  +  A ++ +  A   +     A    ++ PS +    D+  K
Sbjct: 176 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 227

Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250
            P    A A+ +   +    V+ T   ++ 
Sbjct: 228 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 257


>gi|302191162|ref|ZP_07267416.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus iners AB-1]
 gi|309803182|ref|ZP_07697279.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           11V1-d]
 gi|308164690|gb|EFO66940.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           11V1-d]
          Length = 492

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%)

Query: 1   MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49
           M K        ++ CL   +  F++ +  A     SIL  IK +  L  G +        
Sbjct: 1   MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 60

Query: 50  VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +        + G D++  + ++  +      +    ++     +AL+++++D++      
Sbjct: 61  IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 117

Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R+    + F  I Y           + +    S+    G  I  Q G+     +   
Sbjct: 118 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                   H     ++  +  A ++ +  A   +     A    ++ PS +    D+  K
Sbjct: 176 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 227

Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250
            P    A A+ +   +    V+ T   ++ 
Sbjct: 228 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 257


>gi|259501631|ref|ZP_05744533.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
 gi|259166916|gb|EEW51411.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
          Length = 498

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%)

Query: 1   MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49
           M K        ++ CL   +  F++ +  A     SIL  IK +  L  G +        
Sbjct: 7   MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 66

Query: 50  VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +        + G D++  + ++  +      +    ++     +AL+++++D++      
Sbjct: 67  IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 123

Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R+    + F  I Y           + +    S+    G  I  Q G+     +   
Sbjct: 124 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 181

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                   H     ++  +  A ++ +  A   +     A    ++ PS +    D+  K
Sbjct: 182 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 233

Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250
            P    A A+ +   +    V+ T   ++ 
Sbjct: 234 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 263


>gi|170732513|ref|YP_001764460.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169815755|gb|ACA90338.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 264

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G + +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     LT  +  
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241


>gi|104774186|ref|YP_619166.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423267|emb|CAI98100.1| Amino Acid ABC transporter, substrate binding /permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 493

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 87/257 (33%), Gaps = 24/257 (9%)

Query: 6   FVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAE---VKA 52
             ++L L  LF  +             + +++  IKK G L  GI+           V  
Sbjct: 1   MTALLLLAGLFTAAIPAVDAASSRKVASGTVMKKIKKSGKLVVGISADYPPLEFTKNVNG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
              + G DV+  + ++  +      ++   ++     +AL++ +ID++      T  R+ 
Sbjct: 61  KNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMTPTAERKK 117

Query: 113 SLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
              + F  I Y    D        K   +S +   G ++  Q G+    +L        +
Sbjct: 118 --SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKKNAAKSGI 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K   +       +  A ++ + DA             TND     V      ++   A  
Sbjct: 176 KVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYTTNDTSLSLVKSSLSQAQMGNAVG 232

Query: 230 IIQGDTEWYNIVSWTHY 246
           + +G  +    ++ T  
Sbjct: 233 VAKGQGDLVKAINKTIN 249


>gi|224541590|ref|ZP_03682129.1| hypothetical protein CATMIT_00761 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525502|gb|EEF94607.1| hypothetical protein CATMIT_00761 [Catenibacterium mitsuokai DSM
           15897]
          Length = 253

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 74/237 (31%), Gaps = 14/237 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L+ +       N+S   + K         +     F     +G   G D
Sbjct: 3   MKKFGAIVLAGLMAVSLVGCGGNSSSKNEEK---TYIIATDKTYPPFEMEDDSGKLVGVD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA++        KI+   L       AL+S + D +         R+      F  
Sbjct: 60  MDLIRAIAKD---QKFKIKINSLGFDAACTALESGEADGVIAGMSINDERK--QKYDFSD 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + KK GI   + L G ++  +  T            +  K   +      
Sbjct: 115 QYYETGVSMGVAKKSGIKGYADLKGKTVVAKTSTAGLKYAQSIKDKYGFKLEVVEESTF- 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTE 236
            +    ++    A   D      LK        H  +P    S +    A+++G+ +
Sbjct: 174 -MFEKVKSGEAAACFEDYPV---LKYMVKTGQLHFDIPCGKESPAYYGFAVLKGENK 226


>gi|325278187|ref|ZP_08143686.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
 gi|324096681|gb|EGB95028.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
          Length = 250

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 71/213 (33%), Gaps = 8/213 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V A+    GFDVD   AL   +  +      +  + +    AL +
Sbjct: 23  TLRFATEGAYPPFNYVDADNQLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153
           ++ D +  +   T  R     +AF    Y       + K   I+       G ++  Q+ 
Sbjct: 80  RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKITDAQTHFDGYTVGAQSS 137

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T  +   D +          ++  ++E +A   A R D    D   L      N     
Sbjct: 138 STQAIYAEDVYAKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLQEWISKNGGDCC 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++     +K+  A A+ + D      ++    
Sbjct: 196 KILGDVANTKADAAIAVRKDDEALRQRLNTALQ 228


>gi|227873128|ref|ZP_03991420.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Oribacterium sinus F0268]
 gi|227841022|gb|EEJ51360.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Oribacterium sinus F0268]
          Length = 298

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 80/231 (34%), Gaps = 12/231 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G    G +        V  +G + G+D++    ++  +  D + +   P+N   + L 
Sbjct: 65  SNGSFTVGFDQEFPPMGFVGEDGSYTGYDLELAEEVAKRL--DLTFVP-KPINWDAKDLE 121

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S  ID +          +      F      + Q F++ +   ISS+S L G ++ VQ
Sbjct: 122 LNSGNIDCIWNGFGMEGREDS---YTFVGPYLANKQVFVVREDSDISSLSDLKGKAVEVQ 178

Query: 152 AGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             +T    L         +           +       +  CDA   D         T  
Sbjct: 179 KDSTGLTALNREENKSLKDSFGSLTEVGDYQNAMMDLESGACDAICMDSVVAEYQIKTFK 238

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           + +   +L + +++        +G+TE  + V  T   M   EE  I + N
Sbjct: 239 KKA--KVLSESLTEEQYGIGFKKGNTELADKVKKTLLEMK--EEGAIDKIN 285


>gi|162421292|ref|YP_001604961.1| histidine ABC transporter periplasmic histidine-binding protein
           [Yersinia pestis Angola]
 gi|165937068|ref|ZP_02225633.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008127|ref|ZP_02229025.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|167421349|ref|ZP_02313102.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167424400|ref|ZP_02316153.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|270490135|ref|ZP_06207209.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Yersinia pestis KIM D27]
 gi|294504641|ref|YP_003568703.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis Z176003]
 gi|162354107|gb|ABX88055.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis Angola]
 gi|165914931|gb|EDR33543.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165992509|gb|EDR44810.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166960838|gb|EDR56859.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167056282|gb|EDR66051.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|262362702|gb|ACY59423.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis D106004]
 gi|270338639|gb|EFA49416.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Yersinia pestis KIM D27]
 gi|294355100|gb|ADE65441.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Yersinia pestis Z176003]
          Length = 302

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G +     F    ++G+  GFD+D  + L   I    +K  ++  +      +L+
Sbjct: 68  KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 124

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           +K++D +  +   T  R+  +   F    +      I  K   I  ++  L G  + V  
Sbjct: 125 AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 182

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T E      ++   +    + ++  + I A   + R DA   D  A     L      
Sbjct: 183 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 240

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
           +++     +             + + D E    ++        AE         +Q +K 
Sbjct: 241 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 293

Query: 268 TTNPDV 273
             + DV
Sbjct: 294 YFDFDV 299


>gi|107023050|ref|YP_621377.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|105893239|gb|ABF76404.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 247

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 11/219 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I K G L+  +      F  V  +   +G+D+D    L+ ++      ++ +P+N+ 
Sbjct: 15  LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKSLGVK---LKLVPVNSA 71

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   L + ++D++  +   T  RE    + F        QG        +S+ + L+G 
Sbjct: 72  NRIPYLTTNKVDMVISSLGKTPEREKV--IDFSSAYAPYFQGVFGPSDVKVSTPADLTGK 129

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           ++    G   E+ L+              FE       A+ + +            A+  
Sbjct: 130 TVGATRGALEEIALSQLAP----NATIKRFEDNNATIQAFLSGQVQLIAAGNIVAAAILA 185

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               P     +  +I  SP    + + +      +    
Sbjct: 186 --KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAKIDDAI 222


>gi|325688152|gb|EGD30171.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK72]
 gi|325690261|gb|EGD32265.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK115]
          Length = 287

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +       ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|153938148|ref|YP_001390774.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|170757033|ref|YP_001781065.1| polar amino acid ABC transporter amino acid-binding protein
           [Clostridium botulinum B1 str. Okra]
 gi|152934044|gb|ABS39542.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           Langeland]
 gi|169122245|gb|ACA46081.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum B1 str.
           Okra]
 gi|295318846|gb|ADF99223.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum F str.
           230613]
          Length = 268

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 77/257 (29%), Gaps = 20/257 (7%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50
           M K   +S+L    C+I           S          IK +G L  G+      F   
Sbjct: 1   MSKKKILSVLFIVVCIISFTLIGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                + +GFDVD  + L   +     K++      +     +     D+L         
Sbjct: 61  NDKTDEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
            E ++  +       D    +      I +   L G  + VQ  T++E  +       + 
Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNFIHNKGDLKGKVVGVQTSTSSEQVV----DKLDG 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 + R  E     + +R DA      A  A  + + +     I+   +  S +   
Sbjct: 173 IKEIKRYNRNPEAFIDLKNNRIDAVVVG-YAYAATTMKDKKDDNLKIINSPVGSSDIVMV 231

Query: 230 IIQGDTEWYNIVSWTHY 246
             +G       ++    
Sbjct: 232 TKKGSDHLTKELNKALK 248


>gi|113460358|ref|YP_718419.1| amino acid ABC transporter substrate-binding [Haemophilus somnus
           129PT]
 gi|112822401|gb|ABI24490.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Haemophilus somnus 129PT]
          Length = 260

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 65/210 (30%), Gaps = 11/210 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  F+    L I   T     AS+L  I  +G +  G       F    + G   G+DV
Sbjct: 3   KKITFLFTAVLTIAANTQALAQASLLDRINNKGTITVGTEGTYAPFTYHDSTGKLTGYDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  RA++  +      +++           L++ + D+++     T   E          
Sbjct: 63  EVTRAVAKKLG---VTVEFKETQWDAMLAGLKAGRFDLVANQVALT-TPERQATFDKSEP 118

Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             + G   +    +  I  V  + G     Q  ++    LA        +   +  + + 
Sbjct: 119 YSWSGAMLVARDNETRIKQVEDVKGLK-AAQTLSSNYGELAQ-----KYQAKIVPIDGMA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +     +  R D    D  AL         
Sbjct: 173 QGLLLIQQKRADMTFNDALALLDYLKKYPN 202


>gi|298252298|ref|ZP_06976101.1| extracellular solute-binding protein family 3 [Ktedonobacter
           racemifer DSM 44963]
 gi|297546890|gb|EFH80758.1| extracellular solute-binding protein family 3 [Ktedonobacter
           racemifer DSM 44963]
          Length = 296

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 80/260 (30%), Gaps = 23/260 (8%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKR----------GFLKCGINTGLVGFAEVK-AN 53
               ++ L     +  +T ++   ++K            G L  G +T       V  A+
Sbjct: 22  MLGLMMILAACGSSGTATGSNSGDNVKATVAAPKDLITGGTLTVGSDTTYPPQEYVDTAS 81

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GFDVD    +   +     K+     N       L SK+ D++          +  
Sbjct: 82  GQATGFDVDLITEMGKRMG---LKVNVKKANFDTIIDDLSSKRYDVVISAVTINP--DRQ 136

Query: 114 LGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTL----ADYFKAHN 168
               F P         +       ISSV  L G  + VQ  T     L     D   A  
Sbjct: 137 KKAQFIPYFNAGQSLLVQKGNPDHISSVKDLCGKKVGVQTNTVEFDALTAAKKDCTTAGK 196

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                 V +   ++       R DA   D             P +  I   I  ++P   
Sbjct: 197 PTIALTVLDAQTDVIQLLADKRVDATYQDSPVTDYYLKL--NPGQFEIGGAITDQAPEGI 254

Query: 229 AIIQGDTEWYNIVSWTHYAM 248
            + + DTE +N +   + A+
Sbjct: 255 VVRKDDTEMFNALKAAYDAV 274


>gi|229522319|ref|ZP_04411735.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae TM 11079-80]
 gi|229340304|gb|EEO05310.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae TM 11079-80]
          Length = 256

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 14  MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 61  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 116 PYYDNSAAFVSLAG-KVADQAVLKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 227

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 228 ALLDQLNAALEAVKENGEYA 247


>gi|294339406|emb|CAZ87762.1| putative ABC-type amino acid transport, periplasmic component
           [Thiomonas sp. 3As]
          Length = 288

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 13/256 (5%)

Query: 6   FVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63
               + L  +F  S S     L    K++G L    +        +  +G    G DVD 
Sbjct: 17  LAGSVALCAVFCASASATPIALPQKYKEQGHLTIAADATYAPMEFIAKDGKTVVGADVDL 76

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +A++  +        ++  +      ALQS + D+   +   T  RE  +      +T 
Sbjct: 77  GKAIAKKLGVKAD---FINASFDSIIPALQSGKYDMSMSSFTITKKREEVVDFV-SYMTA 132

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERV 179
                        ++ ++ L G S+ V+ GTT     A    +   A        VF   
Sbjct: 133 GTSFYVKGKGGPKVNGLADLCGMSVAVEKGTTQAADAAKQSQECVAAGKKAVTVSVFPDQ 192

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
              + A  + R        S + A  +   R  +  +  +  + +P   AI + ++    
Sbjct: 193 NGANLAIVSGRAQ-VGMADSPVAAWIVEESRG-QFKLTGESYNSAPYGIAIPK-NSGLAE 249

Query: 240 IVSWTHYAMVTAEELG 255
            V      ++ + E  
Sbjct: 250 PVLQALKEVIASGEYA 265


>gi|297198789|ref|ZP_06916186.1| histidine-binding protein [Streptomyces sviceus ATCC 29083]
 gi|197717404|gb|EDY61438.1| histidine-binding protein [Streptomyces sviceus ATCC 29083]
          Length = 283

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 83/256 (32%), Gaps = 25/256 (9%)

Query: 3   KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGF-AEVK 51
           +    +     +L   + ++           A  +  +K  G L    +     F +E+ 
Sbjct: 10  RVLAATTATAGLLLVAACTSSDDGGSGSKTAAGGVELVKA-GQLTTCTHLPYPPFQSEID 68

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G  +GFDV     ++  +      I   P    +    L S   D+ +     T  R+
Sbjct: 69  --GKVQGFDVSLIDLVAKDLGVKQE-ILDTPFENFKTGAFLNSGSCDLAAAGMTITEERK 125

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNM 169
               + F    +   Q  ++ K  GISS++        +  QA TT E  +         
Sbjct: 126 K--NVDFSDPYFDATQALLVAKGSGISSLADAKAKKVKLGAQAQTTGEDYV------KGQ 177

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            + P+ FE  + +    R+ +  A   D   +              +  +I +       
Sbjct: 178 GFDPVSFESSDAVLNGLRSGQVKAVVIDYPVVQGWLKNKANADAFQVADNINTGEQYGFT 237

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+T+    V+   
Sbjct: 238 VKKGNTKLLAAVNKAL 253


>gi|309807750|ref|ZP_07701684.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Lactobacillus iners LactinV 01V1-a]
 gi|308169010|gb|EFO71094.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Lactobacillus iners LactinV 01V1-a]
          Length = 293

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%)

Query: 1   MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49
           M K        ++ CL   +  F++ +  A     SIL  IK +  L  G +        
Sbjct: 1   MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 60

Query: 50  VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +        + G D++  + ++  +      +    ++     +AL+++++D++      
Sbjct: 61  IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 117

Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R+    + F  I Y           + +    S+    G  I  Q G+     +   
Sbjct: 118 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                   H     ++  +  A ++ +  A   +     A    ++ PS +    D+  K
Sbjct: 176 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 227

Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250
            P    A A+ +   +    V+ T   ++ 
Sbjct: 228 EPQAGNAVAVAKNQPDLLKEVNKTVDKVIA 257


>gi|303325413|ref|ZP_07355856.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio sp. 3_1_syn3]
 gi|302863329|gb|EFL86260.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio sp. 3_1_syn3]
          Length = 247

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 21/244 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   +++L L +    + +                   +        + A    +G+ 
Sbjct: 1   MFRGVSLALLVLTLFCGQALAAE-----------KYTVASDCTWPPMEMLNAQKQPEGYS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D+ RA++ A   +   +    +     F  + + + DI++ +T  T  R+      F  
Sbjct: 50  TDYIRAVAKAAGFE---VDVRNIAWDGIFGGVATGKYDIVASSTTITPERQK--QFDFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q  ++     I S++ L G  +  Q GTT         +  ++      ++ V 
Sbjct: 105 PYYEVVQAVVLPAGTSIKSLADLKGKKVGGQIGTTGIFV----MRKADVDADLKEYDDVG 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    R DA   D                +  +      K      + +G  +  +
Sbjct: 161 LAIQDMVGGRLDAVICDDPVAMYYVNKKADYAGKLNLSFKTGDKEYYGFTVRKGRQDLVD 220

Query: 240 IVSW 243
            ++ 
Sbjct: 221 KLNK 224


>gi|330825798|ref|YP_004389101.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans
           K601]
 gi|329311170|gb|AEB85585.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus
           denitrificans K601]
          Length = 300

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 86/235 (36%), Gaps = 15/235 (6%)

Query: 9   ILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
                 L       +A+ +        IK+ G L+ G       F+ +   +G  +GFD 
Sbjct: 31  AAAFDALVAQGPVADAATIRSSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDA 90

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
              + ++  I  D +K ++  + +  R   L + Q+D++      T  R     ++F   
Sbjct: 91  GLAQLITRYILGDGAKYRFTQVTSSTREQVLINDQVDMVFATYSITPARAE--KISFAGP 148

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y    G ++      I S + L+G  +  QAG+T    LA Y            F+  +
Sbjct: 149 YYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYASKA----VVQEFQTHQ 204

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E   A R  R DAY  D + L    L+       +      ++ P    + +G  
Sbjct: 205 EALDALRQGRVDAYVTDYTLLL-NALSLGTGDARLAGAPFGAQDPYGVGLPKGSD 258


>gi|118586344|ref|ZP_01543796.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oenococcus oeni ATCC BAA-1163]
 gi|118433235|gb|EAV39949.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oenococcus oeni ATCC BAA-1163]
          Length = 282

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 7/210 (3%)

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           G++   +       +G   GFDVD   A    +     K+++ P+N   +   L   QID
Sbjct: 54  GLDDTFIPMGFRNKSGKLIGFDVDLADATFKKLG---IKVEWEPINWSTKEQLLNDGQID 110

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
            +      +  R+    +AF        Q  +   K  I+S + + G ++ +Q G+T + 
Sbjct: 111 AIWNGYTISAARKK--KVAFSIPYKKGTQVLVTLSKDKINSFADMKGKTLGLQNGSTAQT 168

Query: 159 TLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
               Y       +K  P  ++  ++     +A R      D               ++ I
Sbjct: 169 QFQQYKNLLKKYVKGTPQKYDTFDKAFMDLKAGRIQGILVDSMYAGYYVKHLSDSQDYKI 228

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +              + D +    V+    
Sbjct: 229 IYGGYPTDENGVGFRKSDVKLREEVNTVLK 258


>gi|90419717|ref|ZP_01227626.1| periplasmic substrate-binding protein, ABC-type amino acid
           transporter precursor [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335758|gb|EAS49506.1| periplasmic substrate-binding protein, ABC-type amino acid
           transporter precursor [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 253

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 72/225 (32%), Gaps = 13/225 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L DIK  G L+ G       F    A+G   GFDV+  R ++  +  +   ++++   
Sbjct: 21  GSLEDIKSAGTLRIGTEGTYAPFTYHDASGALVGFDVEIGREIAERLGVE---VEFVEGK 77

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQL 143
                  L S + D +      T  R+      F           I+      I+S + L
Sbjct: 78  WDGLIAGLASDRYDAVINQVGITEERQA--RFDFSKPYIVSKAVLIVKDDNADIASFADL 135

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G     Q+ T+    +A+   A       +  E  ++        R DA   D  +   
Sbjct: 136 DGKR-AAQSLTSNYGRIAEEAGA-----SLVGTEGFDQSIQLVLTGRADATINDNLSYLD 189

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            K          I+      +     + +G+ E    +     A+
Sbjct: 190 FKKQKPDAPV-KIVASEAEAAASGVVVQKGNPELVAEIDKALDAI 233


>gi|254242557|ref|ZP_04935879.1| hypothetical protein PA2G_03309 [Pseudomonas aeruginosa 2192]
 gi|126195935|gb|EAZ59998.1| hypothetical protein PA2G_03309 [Pseudomonas aeruginosa 2192]
          Length = 263

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ GI      F+   A G+  GFD D   AL + +     K Q++       
Sbjct: 24  AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             +L+ ++ID    +   T  R     + F    YF     +M +  +   S SQL+G  
Sbjct: 81  IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G T +   +            + +   +EI     A R DA   D   L    L 
Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196

Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             R   +  +                A+ +GD E    ++    A+
Sbjct: 197 TPRGKGYAFVGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242


>gi|295102409|emb|CBK99954.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 281

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 78/228 (34%), Gaps = 18/228 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L    N     +      G  +G DVD  +A++  +     ++Q   ++     L+
Sbjct: 60  EAGKLTMATNATFPPYEMTTDAGTIEGIDVDTAQAIAEKLG---LELQIDDMDFDAALLS 116

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +Q  + DI       T  R   +  +F        Q  I+ +   I+SV  L+G  I  Q
Sbjct: 117 VQQGKADIAMAGITVTDERMAVM--SFSDSYATGIQSVIVPEGSDIASVDDLAGKKIGTQ 174

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT  L  +D F         + ++       A    + DA   D     A       P
Sbjct: 175 RGTTGYLYCSDDFGE----DAVVAYDNGLTAVQALNNGQVDAVVIDNE--PAKAYVESNP 228

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               IL    ++   A  + +G+T     V+         EEL     
Sbjct: 229 G-LKILDTSYAEEDYAIGMAKGNTALLEAVNAAL------EELKADGT 269


>gi|150398330|ref|YP_001328797.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150029845|gb|ABR61962.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 257

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 14/231 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S L D+K  G LK G       F    A+G   GFDV+  + ++  +   P    +L 
Sbjct: 23  AGSNLEDVKSAGVLKIGTEGSYAPFTYHDASGALVGFDVEIGQEVAKRLGVKPE---FLE 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141
                    L + + D +      T  R+      F           I+    + +   +
Sbjct: 80  GKWDGLIAGLDANRYDAVINQVGITEERKK--KYDFSEPYIASKAVLIVRGDDEEVKDFA 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G     Q+ T+    LA    A       +  +  ++        R DA   D  + 
Sbjct: 138 DLKGKKSA-QSLTSNFGKLAQASGA-----ELVGTDGFDQSIQLVLTGRADATINDSLSF 191

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              K      +  +              I +G+ E    ++    A + A+
Sbjct: 192 LDFKKQKPDANVKIAAEKPD-ADYSGIIIRKGEPELLEAINKAL-AEIKAD 240


>gi|313109287|ref|ZP_07795255.1| putative amino acid binding protein [Pseudomonas aeruginosa 39016]
 gi|310881757|gb|EFQ40351.1| putative amino acid binding protein [Pseudomonas aeruginosa 39016]
          Length = 263

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ GI      F+   A G+  GFD D   AL + +     K Q++       
Sbjct: 24  AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             +L+ ++ID    +   T  R     + F    YF     +M +  +   S SQL+G  
Sbjct: 81  IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G T +   +            + +   +EI     A R DA   D   L    L 
Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196

Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             R   +  +                A+ +GD E    ++    A+
Sbjct: 197 TPRGKGYAFVGPEFKDPRYFGEGAGIAVRKGDAELVGKLNAAIDAI 242


>gi|294794962|ref|ZP_06760097.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 3_1_44]
 gi|294454324|gb|EFG22698.1| glutamine ABC transporter, glutamine-binding protein [Veillonella
           sp. 3_1_44]
          Length = 274

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 93/325 (28%), Gaps = 75/325 (23%)

Query: 1   MYKDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M      ++L        L         +       +   + G +     F      +G 
Sbjct: 14  MKFKKIAALLGAFTIASSLLIAGCGNAGNS------QKAWRVGTDATYAPFGFKDKDSGK 67

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D   A+++    +        LN      ALQS  IDI   +   +  R     
Sbjct: 68  LAGFDIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--S 122

Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F    Y  G G +++     I+S   L G  I V  G+T     +    A   +++ I
Sbjct: 123 VDFSKPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVRQFNII 182

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           V     +     +    D    D            +     +  +    +PL  A+ +G+
Sbjct: 183 V-----DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGN 236

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
           TE  N ++                                               GL K 
Sbjct: 237 TELLNKIND----------------------------------------------GLAK- 249

Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSE 319
                I+  G Y E++ +  G +  
Sbjct: 250 -----IKANGKYAEIYKKWFGKEPP 269


>gi|149365248|ref|ZP_01887283.1| histidine-binding periplasmic protein [Yersinia pestis CA88-4125]
 gi|218929846|ref|YP_002347721.1| histidine-binding periplasmic protein [Yersinia pestis CO92]
 gi|115348457|emb|CAL21393.1| histidine-binding periplasmic protein [Yersinia pestis CO92]
 gi|149291661|gb|EDM41735.1| histidine-binding periplasmic protein [Yersinia pestis CA88-4125]
          Length = 262

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G +     F    ++G+  GFD+D  + L   I    +K  ++  +      +L+
Sbjct: 28  KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 84

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           +K++D +  +   T  R+  +   F    +      I  K   I  ++  L G  + V  
Sbjct: 85  AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 142

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T E      ++   +    + ++  + I A   + R DA   D  A     L      
Sbjct: 143 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 200

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
           +++     +             + + D E    ++        AE         +Q +K 
Sbjct: 201 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 253

Query: 268 TTNPDV 273
             + DV
Sbjct: 254 YFDFDV 259


>gi|325062835|gb|ADY66525.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 279

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 67/193 (34%), Gaps = 11/193 (5%)

Query: 8   SILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65
            I   +++   + + +A   L  IK RG L  G+      F  +     + KG ++D  +
Sbjct: 12  LIAGTVVIASMATAAHADATLDRIKGRGKLTVGVILSGAPFGFIDPKTQEQKGLNIDVAK 71

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL++ +  +        +    R   LQ  ++DIL  N  +T  R  +L     P     
Sbjct: 72  ALAAGLGVELVT---ETVTPPNRVQFLQQGKVDILIANMQYTEERAKTLDYVPTP-YDRQ 127

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   I  K  GI     L G   CV  G+     L + + A              E   A
Sbjct: 128 GGAAIGRKDSGIKDWPDLKGKIACVSQGSNYTQPLIEQYGA-----QVKALPSQPESLLA 182

Query: 186 YRAHRCDAYTGDI 198
            +   CD      
Sbjct: 183 LKGGNCDVSVHVN 195


>gi|229526720|ref|ZP_04416124.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae bv. albensis VL426]
 gi|229336878|gb|EEO01896.1| arginine ABC transporter periplasmic arginine-binding protein ArtI
           [Vibrio cholerae bv. albensis VL426]
          Length = 256

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 82/258 (31%), Gaps = 27/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 14  MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 61  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ GTT +  L +           + +   +
Sbjct: 116 PYYDNSAAFVSLAG-KVADQATLKGKRVGVQNGTTHQSFLLE----QRSDVVAVPYSSYQ 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEW 237
           +     +  R D+  GD + +       D   E+    +       +    A+ + +   
Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW-FKGDNKLEYVGERVTNPQYFGNGFGIAVNKDNQAL 229

Query: 238 YNIVSWTHYAMVTAEELG 255
            + ++    A+    E  
Sbjct: 230 LDQLNAALEAVKENGEYA 247


>gi|51245834|ref|YP_065718.1| glutamine ABC-transporter, periplasmic substrate-binding protein
           (GlnH) [Desulfotalea psychrophila LSv54]
 gi|50876871|emb|CAG36711.1| probable glutamine ABC-transporter, periplasmic substrate-binding
           protein (GlnH) [Desulfotalea psychrophila LSv54]
          Length = 231

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 12/212 (5%)

Query: 44  LVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              F      +G   GFDV+   A++     D       P+  K     LQS QID    
Sbjct: 18  FPPFEFKDPASGKHVGFDVELWAAIAREAGLDYE---LQPMAFKGIVPGLQSAQIDAGIA 74

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R+    + F    Y  G   ++ K   I  ++ L    +  + GTT+     D
Sbjct: 75  GMSITDKRKKV--IDFSDGYYDSGLLLLVPKGSSIKGLADLVDKKVATKTGTTSV----D 128

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
           + K H+ K   ++F     +         DA   D   + +      +  +  I+  + +
Sbjct: 129 FLKKHSAKTKLVLFPNDNAMFMELMTGGVDAVMFDRPVIESFASKRGQG-QVTIVDTLYA 187

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             P      +G ++    V+     +  + E 
Sbjct: 188 GQPYGIGFPKG-SQLVEKVNIALRTLKDSGEY 218


>gi|27381511|ref|NP_773040.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27354679|dbj|BAC51665.1| blr6400 [Bradyrhizobium japonicum USDA 110]
          Length = 280

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 86/276 (31%), Gaps = 15/276 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +    +      L   + +  A  L DI+K G LK G     V +      G   GFDV
Sbjct: 6   RRRVLRAAAGAATLSLLARAARADTLQDIRKSGVLKAGCQVVQVPWGFSDDKGVLTGFDV 65

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +F R  ++ +          P+ +  R  AL + Q+D+L+         +    + F   
Sbjct: 66  EFVRLFAADLGVKAE---ISPVTSSNRVAALLTGQVDMLAAVMGI--FADRQKVVLFARP 120

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              +   FI    + +   S ++G  + V  GT  ++ L               ++    
Sbjct: 121 YCVNDTVFIGKVGQTVKGWSDMTGLRVGVPRGTPQDIALTKAAPK---GATIQRYDDDAN 177

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  A++ D   G  + +  +               +++++  A A    +    +  
Sbjct: 178 TVQALIANQVDLIGGASTQVRNIAHVAGDGKFEQKF--VLARAYNAAAFRPSERALADAC 235

Query: 242 -----SWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
                +      + A        ++  +        
Sbjct: 236 SAFVANSLANGSLPALFDRWIGTSLPDMPATGEGDA 271


>gi|261343374|ref|ZP_05971019.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Providencia rustigianii DSM 4541]
 gi|282568514|gb|EFB74049.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Providencia rustigianii DSM 4541]
          Length = 247

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 23/237 (9%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
             +  ++ +              ++         F     N    GFDVD   A+   + 
Sbjct: 11  GAVTLSATAAEKDT---------IRFATEATYAPFEMFDKNNQIVGFDVDLANAMCEKM- 60

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
              +   +   +      +L+ ++ + L    D T  R     + F    Y +   FI  
Sbjct: 61  --NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITPER--QQQVDFTETYYPNSAEFIAV 116

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I+ + QL G  I VQ GTT +  + +  K        + ++  +      +  R +
Sbjct: 117 K-DKITGIDQLKGKKIGVQNGTTHQKYIMEQHK----DMTVVPYDNYQSAILDLQNGRIN 171

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245
           A  GD +       T    +   I   +         L  A+ +G+ E  + ++   
Sbjct: 172 AVFGDTAVADEWLKTKGNENLAAIGDKVTDPQYFGIGLGIAVRKGNKELLDKMNKAL 228


>gi|153010588|ref|YP_001371802.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562476|gb|ABS15973.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 275

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 78/259 (30%), Gaps = 20/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +   IL     +     L  + ++  +    N G    + +  +    GFD
Sbjct: 1   MKKIITIMGIAGAILATGFSAYAGETLDRVMEKKAMVVATNAGWPPQSFLDDSNKLVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +      + +   +           + D+   +   T  R  +  + F  
Sbjct: 61  VDVANEIGKRLG---VTVSFETPDWATLTGGRWQGRYDVGVGSVTPTKAR--ANVIDFAG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--- 177
           I Y+    +++HK     SV+ L G  I V+  TT+E       +       PI ++   
Sbjct: 116 IYYYSPYVYVVHKDSAAKSVADLKGKIIGVETATTSEDYARRQLEIDAPGLPPIEYKLEP 175

Query: 178 -------RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                           R     R DA         A     +     +I  +   + PL 
Sbjct: 176 GEIRTFADSMLPFDDLRLGDGVRIDAII--APEQTAQNAIKNGYPVKIIEGEYAFREPLV 233

Query: 228 PAIIQGDTEWYNIVSWTHY 246
               + D +W   +     
Sbjct: 234 VIAEKNDPDWTAKIGEIIK 252


>gi|312868382|ref|ZP_07728582.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parasanguinis F0405]
 gi|311096127|gb|EFQ54371.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parasanguinis F0405]
          Length = 275

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 8/245 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    S L L+ +  TS     S       +  ++ G       F+  + +G   G+++
Sbjct: 4   KKVIKYSALGLVAVLATSALVACSSDKSASGKKTIEVGTVGTTKPFSYEEKDGKLTGYEI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  R +      D  ++ +        F  L S +  I + N  ++  RE      +   
Sbjct: 64  EVLREIFK--GSDKYEVNFNKTEWSSVFAGLDSDRFQIGANNISYSKEREE--KYLYPNP 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER--V 179
              +    ++ K   I S+  L G    V  GT+T   L DY K H+     + +    +
Sbjct: 120 YARNPLVLVVPKDSSIKSLDDLGGKKTEVVQGTSTAKQLEDYNKKHSDNPTNLQYTDGTI 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238
           + I A     R D    +        + +       ++     + P     I + D +  
Sbjct: 180 QTIMANLADGRTDYKIFER-ISVDTIIRDQGYDNLKVIELPSDQQPYVYPIIAKEDKDLQ 238

Query: 239 NIVSW 243
             V+ 
Sbjct: 239 KFVNK 243


>gi|296876379|ref|ZP_06900431.1| arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Streptococcus parasanguinis ATCC 15912]
 gi|296432669|gb|EFH18464.1| arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Streptococcus parasanguinis ATCC 15912]
          Length = 754

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 63/210 (30%), Gaps = 16/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L      +   +A           +K   +T    F    ++  +KG D
Sbjct: 29  MKKKLLACLLFLFPFVAFAGHAHAET---------IKVVFDTAYAPFEFKDSDQTYKGID 79

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++     D  K             A+Q+ Q D +      T  RE         
Sbjct: 80  VEILDKVAEINGWDLDK---SFPGFDAAVNAVQAGQADAIMAGMTKTTEREKV--FTMSD 134

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+  SQL G ++ V+ GT  +  L      +  K     F+  +
Sbjct: 135 TYYDTKVVIATKKADKITKYSQLKGKTVGVKNGTAAQRFLDKNKDKYGYK--IKTFDTGD 192

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D   +         
Sbjct: 193 LMYNSLSAGAVDAVMDDQPVIQYAIQKGQD 222



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 10/192 (5%)

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F        + G D+D  +A++         I+            +QS     +   
Sbjct: 310 FAPFVFQNGKNKYTGIDMDLIKAIAKD---QGFTIEIDNPGFDAAISDVQSGHAQGMIAG 366

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+ +    F    Y       + +   I S   L G ++ V+ GT+++  L + 
Sbjct: 367 MTVTDARKET--FDFSEPYYTANSILAVQESSKIDSYDDLKGKTVGVKNGTSSQNFLEEN 424

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            K +  K     F     +  +  +    A   D   +   K    +  +     +    
Sbjct: 425 QKKYGYK--IKTFSDGASMYDSLNSGSVAAIMDDEPVI---KYAIKQGRKFKTPIEGTPS 479

Query: 224 SPLAPAIIQGDT 235
             LA A+ +G+ 
Sbjct: 480 GQLAFAVKKGEN 491


>gi|121602328|ref|YP_988906.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella bacilliformis KC583]
 gi|120614505|gb|ABM45106.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bartonella bacilliformis KC583]
          Length = 255

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 81/245 (33%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++++  + LF      NA           LK         F+ + +N    GFD+D
Sbjct: 2   KSLVIALIASVALFT--QWANAET---------LKIASEGSYPPFSYIDSNNKLHGFDID 50

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              AL   +  +      +  +       L +K+ D +  + + T  R     + F    
Sbjct: 51  ISYALCEKMKVE---CVIIAQDFDGIIPGLLAKKYDAIIASLNPTQER--LKKIDFTNAY 105

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y      I+ K   I   S     G ++ VQ+ T   +   D + +     +  ++    
Sbjct: 106 YSTELAVIVTKDSNIEKISTEAFKGKNLGVQSNTVQAIYAEDNYASKG--ANIKLYPTAI 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++    +HR D    D   +              +     +K P+A AI + +    N 
Sbjct: 164 EVNRDLISHRLDVSITDKLQILNWLKNEGEECCKFLGVIENTKLPVAIAIRKKNENLKNK 223

Query: 241 VSWTH 245
            +   
Sbjct: 224 FNQAI 228


>gi|317057988|gb|ADU90705.1| putative amino acid transporter periplasmic ligand binding protein
           [Collimonas sp. MPS11E8]
          Length = 268

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 14/240 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + +A  L DI+KRG L+  +      F  V A    +G D+D    ++  +     K
Sbjct: 21  AAPAAHADSLSDIQKRGVLRIAVPQDFAPFGSVTAELKLQGLDIDVAGLVAKNMG---LK 77

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +Q +P+ +  R   LQ+ + D++         RE  +   F                  +
Sbjct: 78  LQLVPVTSANRIAYLQTAKADLVISTLGKNAEREKVIA--FSQPYSPYNNSVFGPTAIKV 135

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           S  + L+G +I V  GT  +  L++             +E    + +AY A +       
Sbjct: 136 SGPADLAGKTIGVARGTFQDSQLSETAP---PSATIKRYEDNNGMISAYLAGQVQLVGTG 192

Query: 198 ISALYALKLTN--DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                AL      ++P    I+ +          +++ +      V+          EL 
Sbjct: 193 DFVAVALAAKTTGNKPQMKYIIQESACY----VGLLKEEPALMAAVNAALTKAKKDHELN 248


>gi|266624831|ref|ZP_06117766.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           hathewayi DSM 13479]
 gi|288863292|gb|EFC95590.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           hathewayi DSM 13479]
          Length = 285

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 90/289 (31%), Gaps = 48/289 (16%)

Query: 1   MYKDFFVSILCL-IILFFTSFSTNASIL-------------------------------- 27
           M K+  V +  + +    T+  ++ S                                  
Sbjct: 1   MKKNVLVLVAAVCMAAALTACGSSNSTAETTAAAAETTTADTAAGSTDTAADTAADTSAA 60

Query: 28  -GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
                  G +    N     +     N    G D D  RA++  +     +++   +   
Sbjct: 61  EETEGAGGKIVMVTNAEFPPYEYH-ENNTIVGIDADIARAIADQMG---MELEIQDMAFD 116

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+QS + D  +        R     + F        Q  I+ +   I++ + L+G 
Sbjct: 117 SLIPAIQSGKADFAAAGMTVNEERLR--NVDFTETYAEAAQVIIVKEGSAIAAPADLTGK 174

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I VQ GTT ++   D   A         F +  E   A    + DA   D       K+
Sbjct: 175 KIGVQTGTTGDIYADDVENA-----EVQRFNKGMEAVMALTQDKLDAVIIDR---EPAKV 226

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                    IL +  ++   A AI +G+TE  + ++     +  + EL 
Sbjct: 227 FVKENEGLKILDEAFTEEEYAIAIKKGNTELLDKMNAAIKELKESGELQ 275


>gi|110801606|ref|YP_697894.1| amino acid ABC transporter [Clostridium perfringens SM101]
 gi|110682107|gb|ABG85477.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens SM101]
          Length = 278

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 30/290 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K+ F     V+++  + L              +   +  IK+ G L  G++     + 
Sbjct: 1   MKKNIFKKMLSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+D  + ++  +  D   ++   +       ++++  ID+      
Sbjct: 61  FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163
            T   +    + F  I Y   QG +++K     I  +  L G  +  Q G+     +   
Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                      + + V  +    +  + DA   ++    A   +       V    I + 
Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228

Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               A AI +G+ +  + V+ T   +    ++     +  ++       +
Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278


>gi|251788996|ref|YP_003003717.1| cationic amino acid ABC transporter periplasmic binding protein
           [Dickeya zeae Ech1591]
 gi|247537617|gb|ACT06238.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya zeae Ech1591]
          Length = 259

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 13/219 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G +     F    A+G   GFD+D  + L   I    +   ++  +      +L++K
Sbjct: 27  IKIGTDPTYAPFESKDASGQLVGFDIDLAKELCKRI---QANCTFVESDFDALIPSLKAK 83

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      I  K   I  ++  L G  + V   +
Sbjct: 84  KIDAIISSLSITEKR--QQEIAFTDKLYAANARLIAKKGSPIQPTLEALKGKRVGVLQAS 141

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E     Y++   +    + ++  + I A   + R D    D  A     L      ++
Sbjct: 142 TQEAYANQYWQPKGVD--VVAYQNQDLIYADLTSGRIDTAFQDEVAGSEGFLKQAAGKDY 199

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
                 +    L        + + +TE    +     AM
Sbjct: 200 AFAGPAVKDDKLFGVGTGMGLRKNETELKAALDKAFAAM 238


>gi|213586697|ref|ZP_03368523.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 180

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 64/178 (35%), Gaps = 11/178 (6%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+       +     +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   M  
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGC 179


>gi|297580207|ref|ZP_06942134.1| arginine ABC transporter [Vibrio cholerae RC385]
 gi|297535853|gb|EFH74687.1| arginine ABC transporter [Vibrio cholerae RC385]
          Length = 243

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 82/258 (31%), Gaps = 27/258 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCQQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ GTT +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGTTHQSFLLE----QRSDVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEW 237
           +     +  R D+  GD + +       D   E+    +       +    A+ + +   
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW-FKGDNKLEYVGERVTNPQYFGNGFGIAVNKDNQAL 216

Query: 238 YNIVSWTHYAMVTAEELG 255
            + ++    A+    E  
Sbjct: 217 LDQLNAALEAVKENGEYA 234


>gi|218675046|ref|ZP_03524715.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli GR56]
          Length = 148

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F  + +  + LF  S   +               G ++    F  V A+G  +GFD+D
Sbjct: 6   RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL + +    ++  ++  +      AL +K+ D++  +   T  R     + F    
Sbjct: 57  IAKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           Y       + K   I+ V+ L G  I  Q  TT    
Sbjct: 112 YNTPPAIAVPKDSKIADVAGLKGKVIGAQTSTTHANY 148


>gi|332040826|gb|EGI77198.1| extracellular solute-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 256

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 83/260 (31%), Gaps = 24/260 (9%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +  L   ++  + F+              ++ G  +    F    A G+ KG +++  + 
Sbjct: 1   MGCLVASVMSVSGFAHAQD---------VVRIGTLSDYAPFEYRDAKGELKGMEIELAKI 51

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   I    +K +++ ++      AL++K+ID +      T  R+    + F  +     
Sbjct: 52  MCKHI---QAKCEFVTIDFDALIPALKAKKIDAVVAQMSITDERKK--EVDFTDLFTLAP 106

Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             ++     GIS     L G ++ V +G+T E  L               +   + I   
Sbjct: 107 VQYVAKTGSGISDDPATLKGKTVGVYSGSTHETYLKKRLPKSTSGIATKSYPSQDPIWLD 166

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT---EW 237
             A R  A   D +  +       +     +    ++           A+ +GD      
Sbjct: 167 LEAGRIQAALSDTTVAHEWLEKTGKAKGFALAGKPLNDLAIFGEGTGIAVRKGDPLRTRL 226

Query: 238 YNIVSWTH-YAMVTAEELGI 256
              +          AE   +
Sbjct: 227 NGAIKQVLSDGSFAAENKKV 246


>gi|295704922|ref|YP_003597997.1| sulfur-containing amino acid ABC transporter sulfur-containing
           amino acid-binding protein TcyJ [Bacillus megaterium DSM
           319]
 gi|294802581|gb|ADF39647.1| sulfur-containing amino acid ABC transporter, sulfur-containing
           amino acid-binding protein TcyJ [Bacillus megaterium DSM
           319]
          Length = 270

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 8/250 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M K +   +  ++ +      TNAS     K       +  G  T       +   G   
Sbjct: 1   MKKYWLFLLSIVVAVSVAGCGTNASSSAGEKNEKDVQTIVVGTGTQFPNICFIDDKGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DV+  RA+   + D     ++  +      L+L+S +ID+++ N      R+      
Sbjct: 61  GYDVEVVRAIDKELKDYKF--EFKTMEFSNLLLSLESNKIDMIAHNMAQNAERKKKFLFN 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                Y      +   +  I S+  L G  + V A +   + L  Y + H  K   +   
Sbjct: 119 DETYNYSPLYVTVPKNRNDIHSLKDLEGKKMIVGATSNAAVYLDKYNQKHGNKIDVVYAG 178

Query: 178 R-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  ++     +  R DA      ++           +   + DI+  S +     + D +
Sbjct: 179 QGADDATTQLKTGRADATLATPFSIDFSNQALK--FQQKTVGDIVINSKVYFMFNKKDEK 236

Query: 237 WYNIVSWTHY 246
             + V     
Sbjct: 237 LKSEVDQAIK 246


>gi|261883825|ref|ZP_06007864.1| Solute-binding protein/glutamate receptor [Campylobacter fetus
           subsp. venerealis str. Azul-94]
          Length = 173

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 70/157 (44%), Positives = 99/157 (63%)

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LS  T WTL R+  +G+ F    Y+
Sbjct: 1   RAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVGTAYY 60

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADY  AHN+KY P+V +  + +  
Sbjct: 61  DGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSADGLLK 120

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           A+   R D YT D  ALYA +L    P  + +  +  
Sbjct: 121 AFETGRGDVYTTDALALYAQRLILAEPDAYGVFSEGY 157


>gi|298293509|ref|YP_003695448.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296930020|gb|ADH90829.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 261

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 69/230 (30%), Gaps = 13/230 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +    A  L  IK+ G +K G       F     +    GFDV+  R ++  +     
Sbjct: 21  GGAAVARADDLAAIKQAGVIKIGTEGTYPPFTYHDGSNQLVGFDVEIGREIAKRLGVKAE 80

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
              +L          L +++ D++      T  R+      F           I+     
Sbjct: 81  ---FLEGKWDGLIAGLDARRYDVVINQVGITEARKA--KYDFSEPYIASKAVLIVADGND 135

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S   L G     Q+ T+    LA+ + A       +  +  ++        R DA  
Sbjct: 136 AIKSFEDLKGKR-AAQSLTSNFGKLAEKYGA-----TLVGTDGFDQSIQLVLTGRADATL 189

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D  +    K          I+ +          + +G+ E    ++   
Sbjct: 190 NDSLSFLDFKKHRPDAKV-RIVAEEKDADHSGVILRKGNPELVAAINKAL 238


>gi|49474281|ref|YP_032323.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           quintana str. Toulouse]
 gi|49239785|emb|CAF26175.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           quintana str. Toulouse]
          Length = 250

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 83/247 (33%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   +  +   +   NA           LK         F+ + +N +  GFD
Sbjct: 1   MK---LLAAAIITSVTLFAQLANA---------KALKIATEAYYPPFSYIDSNNELHGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +  +      +  +     L L +K+ D +  +   T  R     + F  
Sbjct: 49  IDISYALCKKMNVE---CTLIKQDFDGIILGLLAKKYDAIIASLAPTQER--LQKIDFTN 103

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      I  K  GI   S   L G ++ VQ+ TT      D++ +     +   +  
Sbjct: 104 AYYSTELVVIGSKVSGIKEISAKALQGKNLGVQSNTTQAAYAEDHYASEG--VNIKFYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E++    ++R DA   D            +    ++     +K P+A  I Q D +  
Sbjct: 162 AIEVNRDLLSNRLDAVISDKLKALTWLENEGKDCCQLLGTIQGTKFPIAIGIRQNDNDLK 221

Query: 239 NIVSWTH 245
           N  +   
Sbjct: 222 NKFNKAI 228


>gi|84387891|ref|ZP_00990905.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio splendidus 12B01]
 gi|84377237|gb|EAP94106.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio splendidus 12B01]
          Length = 269

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 83/249 (33%), Gaps = 10/249 (4%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K    ++L L  +   + ++    L  I +RG L+ G++T  V +A     GD  G
Sbjct: 1   MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  + L+         ++++P        +L SK+ D++      T  R     + F
Sbjct: 59  FEIDVAKRLAQDSGWK---VEFVPTAWDGIIPSLLSKKFDVIIGGMSITEARAK--SVLF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  G     +K+            S  V+             +A   K   + F+ 
Sbjct: 114 TEPYSHSGVQLAANKELAEGFTQISDFDSRRVKIAARRGAFTVQVARATFPKAKVLQFDD 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +           A            + N   +  +   + +SK   A A+  G+T+  
Sbjct: 174 DAQAFQEVLNGNAHAVIASSPKPEHEAIKNAD-TLFIPFEERLSKGNEAFAVRLGETDKA 232

Query: 239 NIVSWTHYA 247
              +    A
Sbjct: 233 EFFNEWIKA 241


>gi|315037375|ref|YP_004030943.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1112]
 gi|312275508|gb|ADQ58148.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1112]
          Length = 494

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 87/265 (32%), Gaps = 29/265 (10%)

Query: 1   MYK----DFFVSILCLIILFFT----SFST-----NASILGDIKKRGFLKCGINTGLVGF 47
           M K      F++I+ LI   F     +F+      + +++  IK+   L  G +      
Sbjct: 1   MKKAKIIHLFLAIITLISTLFLFNQPTFAATKKVESGTVMKKIKQSKELVVGTSADYPPL 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                V  N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +   +  ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQSKYRKIKDFADQTVGAQTGSIQYQLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K            ++  +  A ++ +      +          ND     V      
Sbjct: 176 SQMKK----SKVKGLGKINNLVLALKSGKMSGVVMEE-LTAKAYAQNDNSLMAVRSDLRE 230

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++  A A+ +G  +    V+ T  
Sbjct: 231 QQAGNAVAVAKGQGDLVKAVNKTIN 255


>gi|107103384|ref|ZP_01367302.1| hypothetical protein PaerPA_01004454 [Pseudomonas aeruginosa PACS2]
 gi|116051896|ref|YP_789261.1| putative amino acid ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218889851|ref|YP_002438715.1| putative amino acid binding protein [Pseudomonas aeruginosa LESB58]
 gi|254236770|ref|ZP_04930093.1| hypothetical protein PACG_02780 [Pseudomonas aeruginosa C3719]
 gi|115587117|gb|ABJ13132.1| putative amino acid ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168701|gb|EAZ54212.1| hypothetical protein PACG_02780 [Pseudomonas aeruginosa C3719]
 gi|218770074|emb|CAW25836.1| probable amino acid binding protein [Pseudomonas aeruginosa LESB58]
          Length = 263

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ GI      F+   A G+  GFD D   AL + +     K Q++       
Sbjct: 24  AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             +L+ ++ID    +   T  R     + F    YF     +M +  +   S SQL+G  
Sbjct: 81  IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G T +   +            + +   +EI     A R DA   D   L    L 
Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196

Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             R   +  +                A+ +GD E    ++    A+
Sbjct: 197 TPRGKGYAFVGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242


>gi|331268244|ref|YP_004394736.1| amino acid ABC transporter substrate-binding protein [Clostridium
           botulinum BKT015925]
 gi|329124794|gb|AEB74739.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum BKT015925]
          Length = 281

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 34/291 (11%)

Query: 1   MYK----DFFV--SILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGL 44
           M K     F +   I+ + +                + N S +  IKK G L  G     
Sbjct: 1   MLKGKKLKFIICSLIVTMGVTLLVGCGNKDDGNKNQAKNMSKIEQIKKSGKLVLGTCADY 60

Query: 45  VGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
             +          +  GFD++  + ++  +      ++   ++     L+++S ++D + 
Sbjct: 61  PPYEVHKIKDGKDEIVGFDIELAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKVDFVI 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELT 159
              + T  RE    + F  I Y   Q  I+ K     ++ +  LSG  I  Q  +  E  
Sbjct: 118 SGMNPTPAREK--EIDFSKIYYKAKQSVIIRKDDKNKLTDLQSLSGKKIGAQITSLQEKI 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
             +  K  N     I   +V E+    +  + DA   +     A             +  
Sbjct: 176 AKEDIKGAN----VISLGKVNELILGLKGKKTDAVIVEEPVAKAYVAKYPELMVAN-INV 230

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
                  A  I +G  ++ + V+ T   + +  E+   QK I++ S+++ +
Sbjct: 231 GKPNEGSAVGIQKGSKDFVDSVNKTIDRLNSKNEM---QKMIDKASQESKD 278


>gi|315641120|ref|ZP_07896199.1| glutamine ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus italicus DSM
           15952]
 gi|315483128|gb|EFU73645.1| glutamine ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus italicus DSM
           15952]
          Length = 722

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 80/263 (30%), Gaps = 16/263 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   L  I++ F   S  +    +       + G +     F     N ++ G D
Sbjct: 1   MKKRLFFLTLFSIMMTFFLTSVKSVSADE----KTYQIGTDVTFAPFEFQNDNKEYVGID 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     D   +    L        +QS Q+D +      T  R+      F  
Sbjct: 57  IDLLKAIAKDQGFD---VNIRALGFDSSIQGVQSGQLDGMIAGMSITDERKK--SFDFSD 111

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    +      ISS   L G  +  + GT +   L +    +        ++  
Sbjct: 112 PYFDSGIQMAVKGDDTSISSYEDLKGKIVGAKVGTESATFLDENKDKYGY--TVKTYDDA 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWY 238
             +  A       A   D      L     +  +  ++ D    +    A+ +  +TE  
Sbjct: 170 TGLYGAIDNGTVQAIFDDYPV---LGYAITKGQDLKLVGDAEKGNSYGFAVKKGQNTELL 226

Query: 239 NIVSWTHYAMVTAEELGITQKNI 261
              +     +  + E      N 
Sbjct: 227 EKFNAGLKKLKASGEYDKIVANY 249



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 75/229 (32%), Gaps = 18/229 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+       ++    F    ++ ++ G DVD  +  ++ +      I++  +       A
Sbjct: 269 KKDTYVIASDSAFAPFEFQNSSNEYVGIDVDLLKR-AAELQG--FNIEFKFIGFSAAVQA 325

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           ++  Q D +      T  R+      F    +  G    + K    I S   L G ++  
Sbjct: 326 VEGNQADGMIAGMTITDERK--NSFDFSNAYFQSGIQIAVKKDNTSIKSYEDLKGKTVGA 383

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + GT +   LA     +  K     ++  +++  A +    DA   D   +         
Sbjct: 384 KVGTESADFLAANKDKYGFK--VKNYDAADQLYEAVKVGAVDAIMDDYPVIGYAISQGQ- 440

Query: 211 PSEHVILPDIISKS---PLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
                 L   I+K        A+ +  ++E  ++ +     M    E  
Sbjct: 441 -----ELATPIAKESGGEYGFAVKKGQNSELIDMFNEALAEMKRTGEYD 484


>gi|271966877|ref|YP_003341073.1| extracellular solute-binding protein [Streptosporangium roseum DSM
           43021]
 gi|270510052|gb|ACZ88330.1| extracellular solute-binding protein family 3 [Streptosporangium
           roseum DSM 43021]
          Length = 294

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 90/302 (29%), Gaps = 40/302 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL---------------------GDIKKRGFLKCG 39
           M K  +  I   + +   +     S                         ++K G L+  
Sbjct: 1   MTKRLYSVIAVALAVSAFAGGCGRSSSGTDAGAGAASAAGKTAKDLVPEAVRKTGELRMA 60

Query: 40  INTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
            + G            +  G D D   A+++ +     K++            LQ+ + D
Sbjct: 61  TSEGYPPMEMYKPGTQELTGVDPDLAAAIAAKLG---LKVKVTNAAFDGLIPGLQAGRWD 117

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTT 156
           ++  +   T  R     + F    +  G   ++ K     I ++  L G ++ +  G++ 
Sbjct: 118 MVMSSMSDTEERRA--AVDFVD-YFSAGGAIMVKKGNPEGIKTLEDLCGRTVVLAKGSSN 174

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
                   +    K   +  E       +  + R  A   D               ++ +
Sbjct: 175 LAIGQRQDEKCAKKMQIMQSEDAPTGLLSIDSGRAVATIVDSPVAAMY---AKDTGKYDV 231

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA-------EELGITQKNINQVSKDTT 269
           LP+     P   A+ + +T   + V+     +          E+ G+    + +V  +T 
Sbjct: 232 LPEQYDAGPWGIAVDRRNTALRDAVAKAMQELTADGGYKAVLEKYGVASNAVPEVMVNTK 291

Query: 270 NP 271
             
Sbjct: 292 PW 293


>gi|312278807|gb|ADQ63464.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           ND03]
          Length = 240

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 67/233 (28%), Gaps = 14/233 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             IK+   +     +    F     V       G D++  +A+   +      +++  ++
Sbjct: 4   KTIKENKKIVVATESEFAPFEFKSLVNGKDTLVGADIELAKAIGKKLGVK---VEFSVMS 60

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQ 142
                 ++QS + DI       T  R+      F    Y      I+ K      +S   
Sbjct: 61  FDNVLASVQSGKADIAIAGISVTDERKKV--YDFSDSYYTSENVVIVKKDKVNDFTSADS 118

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+  ++  Q G+  E                +      E+    ++ +  A   + +   
Sbjct: 119 LAKQTVGTQKGSVQETIAKKQLSKA----SVVSLASNGEMINELKSGQIQAVVLEKAIAE 174

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                ND  +              A AI +G  +    ++        + +  
Sbjct: 175 GYIAQNDDLTLASFNLKSDGSDAYAVAIRKGSDDLLKEINAVIKETKESGKFD 227


>gi|301059423|ref|ZP_07200344.1| bacterial extracellular solute-binding protein, family 3 [delta
           proteobacterium NaphS2]
 gi|300446459|gb|EFK10303.1| bacterial extracellular solute-binding protein, family 3 [delta
           proteobacterium NaphS2]
          Length = 296

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 91/268 (33%), Gaps = 23/268 (8%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTN----ASI----LGDIKKRGFLKCGINTGLVGFAEVK 51
           M K      IL  + +F+    T     A      +  I + G L  G    +       
Sbjct: 22  MKKAGMLFGILLAMTIFWGCQHTQVDGGAGTPVTAMDRISESGQLVVGTAGSMPPLNMTT 81

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   G + +  + ++ A+        +  +   +   AL++ ++D++  +   T  R 
Sbjct: 82  KDGAVIGLEPEMAKMMAEAMGVKA---TFKTMPFSQLLPALEAGEVDMVMSDMTITGKR- 137

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAH 167
            ++ +AF    +  G+ F+  +K   S+        +   +    G+T++  + + F   
Sbjct: 138 -NMKVAFVGPYFISGKTFLTTEKWVASAKQSEEVNNANTKLTALRGSTSQQFVEEVFPKA 196

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 +  +  E   A     + DA   D        +      + + +    +  P+ 
Sbjct: 197 ----TLLPGKDYETCVAMVLDGKADAMIADYPICLLSVIRYPN-HKLISVVPPYTYEPIG 251

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            AI + D    N +      +  + EL 
Sbjct: 252 IAIQKNDILLANWLENFLDTLAGSGELK 279


>gi|71064873|ref|YP_263600.1| ABC basic amino acid transporter, periplasmic binding protein
           [Psychrobacter arcticus 273-4]
 gi|71037858|gb|AAZ18166.1| ABC basic amino acid transporter, periplasmic binding protein
           [Psychrobacter arcticus 273-4]
          Length = 309

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 78/283 (27%), Gaps = 24/283 (8%)

Query: 2   YKDFFVSILCLIILFFTSF---STNASILGDIKKRGF---LKCGINTGLVGFAEVKANGD 55
            K  +++ L   +L        +                 +K    +    F+   A+G 
Sbjct: 11  KKALWLAPLSAAMLMLAGCNNSAAPVETTETDAATDVPLNIKIATESSYKPFSYTDADGK 70

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G++++   AL + +      I     +       L +++ D        T  R+    
Sbjct: 71  LIGYEIELVDALCAQMKAKCEVIS---QDWDGLIPGLNAQKFDAAIAGMSITPERKEV-- 125

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F    +  G   I  K   + SV  L G  I  Q  T     L D     +      +
Sbjct: 126 VEFSDPYFHSGIILIGKKGDDV-SVDALKGQPIASQRSTVASQYLQD----KHADADIKL 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234
           ++  +       + R  A   D         T       V   +I  S   +  A  +GD
Sbjct: 181 YDTQDNAYLDLTSGRVRAMMSDKVTGIDWLKTEAGKDYEVKGQEISTSDDAMGIAFRKGD 240

Query: 235 TEWYNIVSWT-------HYAMVTAEELGITQKNINQVSKDTTN 270
                             Y  +T    G +     Q +    +
Sbjct: 241 PLVAKFNKALAELKDNGTYDQITGSYFGTSSTTAAQKAVAAND 283


>gi|37676941|ref|NP_937337.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio vulnificus YJ016]
 gi|37201485|dbj|BAC97307.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio vulnificus YJ016]
          Length = 243

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+       S NA+   +IK        +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLV-------SANAAAQQEIK------FAMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +          AL+ K+ D      D T  R     +AF  
Sbjct: 48  VDLANALCKQL---DASCSFHNQAFDSLIPALKFKRYDAAISAMDITDAR--LEQVAFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 AYYDNSAAFVSFAG-KVADQAALKGKRVGVQNGSTHQSFLLEQMA----GVTAVPYGSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       +  +     +       +    A+ + +    
Sbjct: 158 DAFLDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNAQYFGNGFGIAVNKDNQALV 217

Query: 239 NIVSWTHYAMVTAEELG 255
           + ++    A+    E  
Sbjct: 218 DQLNAALKAVKANGEYQ 234


>gi|33595379|ref|NP_883022.1| solute-binding periplasmic protein [Bordetella parapertussis 12822]
 gi|33599678|ref|NP_887238.1| solute-binding periplasmic protein [Bordetella bronchiseptica RB50]
 gi|33565457|emb|CAE40090.1| probable solute-binding periplasmic protein [Bordetella
           parapertussis]
 gi|33567275|emb|CAE31188.1| probable solute-binding periplasmic protein [Bordetella
           bronchiseptica RB50]
          Length = 276

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 15/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L +    + +   ++L   + +  ++   +  L  +  +       GF+
Sbjct: 11  MLKWLMAVPLALGL----AHAHAETVLEKARAKNEIRIATSDSLKPWGYMDDTNKPIGFN 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R +   +     K+ ++  + K     L + + D++      T  R       F  
Sbjct: 67  LDVSREMGKRMGF--GKVTFVTDSYKNFISGLNADRYDMVVAILTPTEERRK--SADFSN 122

Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F+      I S+  L+G  + V AGTT E     + K         V++  
Sbjct: 123 PYMVVSKNIFVRDDNTSIRSLEDLAGKRLGVAAGTTDEAWARQHVK----DAQIRVYDNF 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R DA   D            R    +  PD+      A A  +G  +   
Sbjct: 179 FLALQDLAIGRVDARITDRVTGMT-AAKEGRFPVKIAGPDLSQDIG-AIAYKKGQDDLAA 236

Query: 240 IVSWTHYAMVTAEELG 255
           IV+     MV    L 
Sbjct: 237 IVNKVIQEMVDDGSLN 252


>gi|256392566|ref|YP_003114130.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256358792|gb|ACU72289.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 320

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 80/254 (31%), Gaps = 16/254 (6%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
              +       +  + +  +I  RG L    +         +++G   G DVD  RA+  
Sbjct: 52  ASAVGAGQVDPAARSQLPAEILARGVLTIATDPTYPPDEFRQSDGTLVGMDVDLARAVGV 111

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +     ++Q+  +  ++    +Q  Q DI   +   T  RE      F    +  G   
Sbjct: 112 KLG---VRVQFNQVQFRDILAGVQQGQYDIGVSSITDTTRREEL--GDFV-TYFQAGSSL 165

Query: 130 IMHKKKGISSVSQ---LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEE 181
           ++     ++       L G  +  Q GT     +     A           PIV     +
Sbjct: 166 LVKSGNPLTLYPDDESLCGHRVAAQDGTIEIDPVLSSRSAQCVADGLPPITPIVVAAEAD 225

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             AA    R DA   D     AL  T        +  D I K+P   A+ + D      +
Sbjct: 226 SRAALLGGRADAMVEDAPI--ALYETAHSGGLLQVAGDQIDKAPYGFALAKEDKPMDTAI 283

Query: 242 SWTHYAMVTAEELG 255
                 ++   E  
Sbjct: 284 LRAMQDLIDDGEYA 297


>gi|167744402|ref|ZP_02417176.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 14]
          Length = 250

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 93/283 (32%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +I+ L ++  ++   +A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++          +  P++      ALQ++ ID+          R     + F   
Sbjct: 53  DLWAEIAK---GAGWTYKVQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA   D   +        +     +    +S         +G       
Sbjct: 164 QAYLALEAGRVDAAMHDTPNVLFFVNNEGKGRA-KVAGAPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248


>gi|148546669|ref|YP_001266771.1| cationic amino acid ABC transporter periplasmic binding protein
           [Pseudomonas putida F1]
 gi|148510727|gb|ABQ77587.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida F1]
          Length = 261

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +    S +              LK GI      FA  + +G   GFD
Sbjct: 1   MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    +K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +S     L G  I VQ G+  +    +   A       + +   
Sbjct: 106 RYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    + +         A+ +GD
Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
               + ++    A+
Sbjct: 224 KANVDRINAAIDAI 237


>gi|260598729|ref|YP_003211300.1| histidine ABC transporter substrate-binding protein HisJ
           [Cronobacter turicensis z3032]
 gi|260217906|emb|CBA32481.1| Histidine-binding periplasmic protein [Cronobacter turicensis
           z3032]
          Length = 237

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 5   LRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---QTQCSFIEQPLDALIPSLKAK 61

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R+  +G  F    Y      ++ K   +  ++  L G  + V  GT
Sbjct: 62  KIDAIMSSLSITEKRQQEIG--FTDKLYAADSRLVVAKGSPVQPTLESLKGKRVGVLQGT 119

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E     ++         + ++  + I +   A R DA   D  A     L       +
Sbjct: 120 TQETYGNVHWAPKG--VEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKGY 177

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 I    L        + + D E    ++   +A + A+          +++K   
Sbjct: 178 QFGGPSIKDEKLFGVGTGMGVRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 230

Query: 270 NPDV 273
           + +V
Sbjct: 231 DFNV 234


>gi|183602518|ref|ZP_02963883.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683562|ref|YP_002469945.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190592|ref|YP_002967986.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241195998|ref|YP_002969553.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183218159|gb|EDT88805.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621212|gb|ACL29369.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248984|gb|ACS45924.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|240250552|gb|ACS47491.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|289178330|gb|ADC85576.1| ABC transporter amino acid-binding protein [Bifidobacterium
           animalis subsp. lactis BB-12]
 gi|295793579|gb|ADG33114.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis V9]
          Length = 311

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 77/281 (27%), Gaps = 40/281 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---------------------------LGDIKKR 33
           M K    ++   +IL   +  T                                  I + 
Sbjct: 9   MKKVAAFALGAAVILGSAACGTTDETQTAAKDSQNATSIVDSVKKDDKIAAMLPQKIAES 68

Query: 34  GFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  G+         V  +G   +G+DVD  +AL+  +        ++  +      ++
Sbjct: 69  GKLTVGMEMTYAPAEFVAEDGKTPEGYDVDLAKALAKTLGVKAD---FISSSFDSIVPSV 125

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            S + D+       T  RE    + F           +            L G  I VQ 
Sbjct: 126 GS-KYDLGITAMTITEERE--DSVDFVSYYKAGSMWVVKKGNPDKVDAKNLCGTKIAVQV 182

Query: 153 GTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           GTT E                    +  ++  +        + D +  D     A    +
Sbjct: 183 GTTQEEDANKIKEQCAADGKAAVEVMPSKQQTDAATNVVTGKADVFYADSP--VAGYAIS 240

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
               +   L ++        AI +GDT+    V      ++
Sbjct: 241 QTDGQLEELGEVEGTIKQGIAIKKGDTQLAEAVQAAMQHLM 281


>gi|172035229|ref|YP_001801730.1| solute-binding family protein 3 [Cyanothece sp. ATCC 51142]
 gi|171696683|gb|ACB49664.1| putative extracellular solute-binding protein, family 3 [Cyanothece
           sp. ATCC 51142]
          Length = 315

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 92/251 (36%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           MYK   +  L L+ +      + A   +  + + G L       LV +A V    +  G+
Sbjct: 19  MYKKMPLVALSLMAMLTLPNKSLAETVIERVARTGVLNVSTRVDLVPYAYVNDEDELVGY 78

Query: 60  DVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            V+    +    +  I  D      +  +  ER  +L ++++DI   +T +T  R+    
Sbjct: 79  SVELIELIRETLAQEIGKDVQIKVIVDDSLDERISSLLNREVDIAC-DTTFTWQRDRF-- 135

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F       G    + +   +SS        I +     +  ++         +   + 
Sbjct: 136 VDFSLAYGVSGIKVFVKEDSNLSSPDSFKNKRIAIIESVLSPESIKVIE----SQVTVVD 191

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234
            + +E    A      D +  D + L   + T   P+ + ++PD       +A  + + D
Sbjct: 192 VDSIEAGIKAVEDGEVDGFAFDGTILEGTRQTLTNPNAYKVVPDESYFKHGIACMVPEQD 251

Query: 235 TEWYNIVSWTH 245
           + + N+V+ T 
Sbjct: 252 STFLNLVNLTI 262


>gi|322513147|ref|ZP_08066279.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinobacillus ureae ATCC 25976]
 gi|322121079|gb|EFX92902.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Actinobacillus ureae ATCC 25976]
          Length = 260

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 12/212 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  + +I L  ++ S     L   I  +G +  G       F    A+G   G+
Sbjct: 1   MLKQLSVIAVSVIALATSATSLAKETLLERINAKGTIIVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      +++           L++ + D+++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VEFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   ++   +  I   S + G     Q  ++    LA    A+      +  + 
Sbjct: 117 EAYSWSGAALVVRNDEEKIKQASDVKGVKTA-QTLSSNYGELARDNGAN-----IVPIDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + +     +  R DA   D  AL      N +
Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPK 202


>gi|257455732|ref|ZP_05620960.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus
           SK60]
 gi|257446860|gb|EEV21875.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus
           SK60]
          Length = 268

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 67/200 (33%), Gaps = 10/200 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++    +  V F+   ANG   GF++D   AL S       K + +  +       LQ++
Sbjct: 48  IRIATESSFVPFSYKDANGKLIGFEIDLADALCSEA---KLKCEVISQDWDGLIPGLQAQ 104

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +   +      T  R     +AF    + +    I  K         L+G S+  Q  TT
Sbjct: 105 KYHAIMAGMSDTAER--RQVVAFSDPYFTNNLVVIGKKGVE-KGADDLAGKSVGAQRSTT 161

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               LA  F        P +++  +       + R D    D +   +   T       V
Sbjct: 162 AAEYLAKNFPKA----TPKLYDTQDNAYLDLESGRTDLMISDSAPALSWLKTAKGQGFEV 217

Query: 216 ILPDIISKSPLAPAIIQGDT 235
               I     +A A+ Q D 
Sbjct: 218 KGQPINIDDKIAIALRQNDP 237


>gi|227820778|ref|YP_002824748.1| putative ABC transporter, periplasmic amino acid-binding protein
           [Sinorhizobium fredii NGR234]
 gi|227339777|gb|ACP23995.1| putative ABC transporter, periplasmic amino acid-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 259

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 92/245 (37%), Gaps = 21/245 (8%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K GI       F    ANG+W+G++V+F +A+ +    D       P+       AL +
Sbjct: 26  IKVGIAAEPYPPFTSPDANGNWEGWEVEFMKAMCAEAKLD---CVITPVAWDGIIPALTA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ID++  +   T  R  +  + F    Y    G +  K + I  +   L+G ++ VQ  
Sbjct: 83  KKIDMIVGSMSITAERLKT--IDFSDKYYNTPTGIMGTKGEDIKPTPEGLAGKTLGVQVS 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +     +F           ++  +E +    A R DA   D  AL A   ++     
Sbjct: 141 TVHQAYATKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALEAFLKSDQGKEC 198

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                ++          +   + +G+TE  + ++    A+             +  SK  
Sbjct: 199 CDYKGEVAQDVDVLGPGVGVGLRKGETELKDKINAAIKAI-------RDNGTYDTFSKKY 251

Query: 269 TNPDV 273
            + D+
Sbjct: 252 FDFDI 256


>gi|89073559|ref|ZP_01160081.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Photobacterium sp. SKA34]
 gi|89050586|gb|EAR56072.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Photobacterium sp. SKA34]
          Length = 242

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 88/248 (35%), Gaps = 28/248 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    SI+ L+     +         DIK        +      F  +  N   +GFD
Sbjct: 1   MNKILLASIIGLVSSQAMA--------QDIK------FAMEATYAPFEYMDENNQIQGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   +    +   +   +      AL+ K+ D      D T  R     ++F  
Sbjct: 47  VDIAKALCKEM---DATCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--QQQVSFTQ 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +  GFI  K   ++ V+ L+G  + VQ G+T +  L D           + +   +
Sbjct: 102 PYYDNAAGFISIKG-KVADVAALNGKRVGVQNGSTHQNYLTDQM----SGVTTVPYTSYQ 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEW 237
           +     +  R D+  GD + +      +D    +V  P    K   +    A+ + + E 
Sbjct: 157 DAFIDMKNGRIDSVFGDTAVIAEWLKKDDN-LAYVGKPVTNPKYFGNGFGIAVNKSNQEL 215

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 216 VKQLNTAL 223


>gi|120555955|ref|YP_960306.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8]
 gi|120325804|gb|ABM20119.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 252

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 78/247 (31%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M   +  ++   + L   + S +A           L+   +   V F  +    G+  GF
Sbjct: 1   MSTKWLKTLGAGLALSVAATSVSAET---------LRVVTDPSFVPFEMMDQETGEMIGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++    ++     D        ++      ALQ+  +DI       T  RE    + F 
Sbjct: 52  DMEIIAEVAERAGFDYD---LNTMDFNGIIPALQTGNVDIAIAGITITDEREEI--VDFS 106

Query: 120 PITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G    +      +  +S L G  +  + G+T+   L    K+ +       +  
Sbjct: 107 DPYYDSGLRILVSQNNDNVDEMSDLEGMKVGTKIGSTSYDFL---MKSLDDNDGVTPYPG 163

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             ++  A  +   DA   D         +     +   +  +        A+  G ++W 
Sbjct: 164 SSDMYMALMSGAVDAVFYDAP-NVGYFASTRGKGKVKTVGPLYEGQQYGIALKNG-SKWV 221

Query: 239 NIVSWTH 245
             V+   
Sbjct: 222 GPVNEAL 228


>gi|158423075|ref|YP_001524367.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329964|dbj|BAF87449.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
          Length = 277

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 11/235 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
             +A    +IK RG +  GI      +  V + G   G D D  R  +  +     ++++
Sbjct: 28  PASAVTPEEIKARGKIIVGIQGDNPPWGFVTSEGKQDGIDADIARLYAKELG---VQVEF 84

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL    R  AL + ++D+L         R     + F      +    I  K   I S 
Sbjct: 85  MPLEVNNRIPALTTGRVDVLFATMAMLPERAK--AVQFSKPYVANAIVLIGPKSAEIKSN 142

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + ++  +I V  G   +  +     +         ++       A  + +  A  G+   
Sbjct: 143 ADMAKFTIGVAKGAAQDTQVTKNAPS---GTTIRRYDGDAASIQALVSGQVQAVGGN--I 197

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            Y  ++   +P E     +   K         G+ E    ++     +    EL 
Sbjct: 198 FYIQRIEQAKPGEFENKLE-FQKLYNGACTRLGEKEINASINAFIDKIKANGELQ 251


>gi|237808338|ref|YP_002892778.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Tolumonas auensis DSM 9187]
 gi|237500599|gb|ACQ93192.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Tolumonas auensis DSM 9187]
          Length = 259

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 22/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V     +       +       +IK+   ++ G+  G   F    A+G   GFD
Sbjct: 1   MKNFRKVMQFAALAFAVNVNAA------EIKE---IRFGVEPGYAPFEVKAADGSLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K +++  +      +L++K+ID +      T  R     + F  
Sbjct: 52  IDLGNEMCKRL---QAKCEWVESDFDGLIPSLKAKKIDAILSAMSITEQR--MQEIDFTN 106

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K  GI  +   L G  + V  GTT E    D +++       + ++  
Sbjct: 107 KLYGTPARLVSAKGSGIQPTAESLQGKRVGVMQGTTAETYAKDNWQSKG--VELVAYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + + A   + R D    D        L   +  +       I+            + + D
Sbjct: 165 DLVYADLVSGRIDTAFQDAVTAGESFLNKPQGEQFEYSGPEINDEKYFGVGAGIGVRKED 224

Query: 235 TEWYNIVSWTH 245
               + ++ T 
Sbjct: 225 GALKDALNKTL 235


>gi|222080929|ref|YP_002540292.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725608|gb|ACM28697.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 269

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 8/243 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                +     L  T+ +  A  L +I     +  GIN  L          + +GFDVD 
Sbjct: 5   KTVCMLAGAACLALTAVAAEAHSLDEILSAKKIVVGINPNLPPLGRFNDKNEIEGFDVDV 64

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L   +  +   +  + +++ +R   L + + DI+      T  R   +  +    T 
Sbjct: 65  AKKLGEMLGVE---VSLVQVSSADRVPFLATGKADIVLGALTRTADRAKVIDFSLPIQTE 121

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                    K          +   +    GTT    + D            +F+   +  
Sbjct: 122 AISALVAKDKPYQTMDDLNSADVHLVEVRGTTPVDFVKDRLPKA----QVTLFDNYPDAV 177

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A+   R DA              N      VI     S       + QG+T   + V+ 
Sbjct: 178 RAFEQGRGDAIVDV-VDYLGAYTKNYSAETRVITDKSASIDYDCIGLAQGNTALKSWVNV 236

Query: 244 THY 246
             Y
Sbjct: 237 ALY 239


>gi|320159032|ref|YP_004191410.1| arginine ABC transporterperiplasmic arginine-binding protein ArtI
           [Vibrio vulnificus MO6-24/O]
 gi|319934344|gb|ADV89207.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Vibrio vulnificus MO6-24/O]
          Length = 243

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+       S NA+   +IK        +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLV-------SANAAAQQEIK------FAMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +          AL+ K+ D      D T  R     +AF  
Sbjct: 48  VDLANALCKQL---DASCSFHNQAFDSLIPALKFKRYDAAISAMDITDAR--LEQVAFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 AYYDNSAAFVSFAG-KVADQAALKGKRVGVQNGSTHQSFLLEQM----SGVTAVPYASYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       +  +     +       +    A+ + +    
Sbjct: 158 DAFLDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNAQYFGNGFGIAVNKDNQALV 217

Query: 239 NIVSWTHYAMVTAEELG 255
           + ++    A+    E  
Sbjct: 218 DQLNAALKAVKANGEYQ 234


>gi|295400464|ref|ZP_06810442.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977367|gb|EFG52967.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 276

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 86/258 (33%), Gaps = 20/258 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST------------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K   + +  L+  F  + S+            +      ++K   +  G  T      
Sbjct: 1   MNKKLSLIVALLLTFFLAACSSKEGATSTTSTANSKDTKEKVQK---IIVGTGTQFPNIC 57

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +  NG   G+DV+  R +   +     + ++  +      L+L++K+ID ++   +   
Sbjct: 58  FIDENGKLTGYDVELVREIDKKL--PEYEFEFKTMEFSNLLLSLETKKIDFIAHQMEVNE 115

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+        P   F  +  +      I S+  L G  + V A +   + L  Y K HN
Sbjct: 116 ERKAKFLFNKEPYNIFPLKVVVRKDNNDIKSIKDLKGKKVIVTATSNAAVFLEKYNKEHN 175

Query: 169 MKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
              H +   +  +++    R  R DA T                 + V+   ++      
Sbjct: 176 AGIHIVYAGQGADDVTNQIRTGRADA-TISTPFAVDFLNKAADAQQKVVGETLLDSKVY- 233

Query: 228 PAIIQGDTEWYNIVSWTH 245
               + +T+    +    
Sbjct: 234 FLFRKDETKLQKRIDEAL 251


>gi|241895357|ref|ZP_04782653.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
 gi|241871331|gb|EER75082.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
          Length = 270

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 22/220 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49
           M K    + +  + L   S S  A +             ++ K+G L  G+      ++ 
Sbjct: 1   MNKYTKTAAVAAVTLMAASSSVYAVVPSVSAKSVPAYQKNLHKKGTLTVGLEGTYSPYSY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G   GF+VD  +A++  +     K++Y           L S + D++  N   T  
Sbjct: 61  RDKSGKLTGFEVDLSKAVAKKL---HLKVEYSQTKFDSLVAGLGSNKYDVVYNNMGKTKE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R      AF     +     I  K   I S + L G      A +           A   
Sbjct: 118 RAA--KYAFAAPYLYTKTVMITKKGSDIKSAADLKGKKSAQSASSNFGQ------AAKKA 169

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             + +      E      + + D       +    K  + 
Sbjct: 170 GTNVVSVPGFAEAIDLVNSGKADVTLNSQDSWGVYKKAHP 209


>gi|107027577|ref|YP_625088.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116693711|ref|YP_839244.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105896951|gb|ABF80115.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116651711|gb|ABK12351.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 267

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +    L      SF+ + +          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLFATALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + S + L+G  I +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPVGSKLLPSAASLAGKRIGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++ + +     A  I +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIVAI 238


>gi|312112431|ref|YP_003990747.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
 gi|311217532|gb|ADP76136.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
          Length = 276

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 87/258 (33%), Gaps = 20/258 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST------------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K   + ++ L+  F  + S+            +      ++K   +  G  T      
Sbjct: 1   MNKKLSLIVVLLLTFFLAACSSKEGATSTTSTANSKDTKEKVQK---IIVGTGTQFPNIC 57

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +  NG   G+DV+  R +   +     + ++  +      L+L++K+ID ++   +   
Sbjct: 58  FIDENGKLTGYDVELVREIDKKL--PEYEFEFKTMEFSNLLLSLETKKIDFIAHQMEVNE 115

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+        P   F  +  +      I S+  L G  + V A +   + L  Y K HN
Sbjct: 116 ERKAKFLFNKEPYNIFPLKVVVRKDNNDIKSIKDLKGKKVIVTATSNAAVFLEKYNKEHN 175

Query: 169 MKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
              H +   +  +++    R  R DA T                 + V+   ++      
Sbjct: 176 AGIHIVYAGQGADDVTNQIRTGRADA-TISTPFAVDFLNKAADAQQKVVGETLLDSKVY- 233

Query: 228 PAIIQGDTEWYNIVSWTH 245
               + +T+    +    
Sbjct: 234 FLFRKDETKLQKRIDEAL 251


>gi|323358917|ref|YP_004225313.1| amino acid ABC transporter periplasmic protein [Microbacterium
           testaceum StLB037]
 gi|323275288|dbj|BAJ75433.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Microbacterium testaceum
           StLB037]
          Length = 268

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 76/269 (28%), Gaps = 29/269 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDI----------KKRGFLKCGINTGLVGFAEVK 51
            +   V    L +      + +                    G L          F+  +
Sbjct: 3   RRRLTVLAATLGLSALALTACSGGTTAGATPGAGAEYGLVSDGTLTVATEGTYRPFSFHE 62

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             GD  GFDV+  +A+   +     ++++        F  L + + D+++        R 
Sbjct: 63  GAGDLTGFDVEIAKAVGDKLG---LQVKFQETQWDAIFAGLDAGRFDVIANQVSINPER- 118

Query: 112 ISLGLAFRPITYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                 F           +       ISS + L+G +   Q+ T+    LA    A    
Sbjct: 119 -QQKYTFSDPYTVSRGVIVTTDSDTSISSFADLAGKTTA-QSLTSNWYELATQSGA---- 172

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 E   +  A  +  R DA   D    Y      + P+   I       S  A A 
Sbjct: 173 -QVEAVEGWAQAVALLKQGRVDATINDQ-LTYLDYEKTNSPTGLKIAAQTDDTSESAFAF 230

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            +G  +    V+         EEL     
Sbjct: 231 KKGQDKLAEAVNGAL------EELRADGT 253


>gi|311112078|ref|YP_003983300.1| arginine ABC transporter binding protein [Rothia dentocariosa ATCC
           17931]
 gi|310943572|gb|ADP39866.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Rothia dentocariosa ATCC 17931]
          Length = 277

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 11/223 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G L    NT  + F   + NG   G D D   A++  +  +            +    L
Sbjct: 44  NGVLTVCTNTPYMPFEY-EENGKIVGIDADIANAIAKDLGAEAQLTSISF-EGLDSGTGL 101

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            S Q DI       T  R+    + F  + + D Q  ++ K   ISSV  L  A +  Q 
Sbjct: 102 TSGQCDIALAGISVTDERKS--KMEFTDVYFEDNQAILVPKNSKISSVEDLKNAKVGAQQ 159

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T+ E    +           + +E  E + +A +  +  A + ++S +      +   S
Sbjct: 160 ATSGESYAKE------KGADVVQYEDNELMFSALKTGQVQAVSANLSVISEALTKDPD-S 212

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +      +   +A A+        +  + T   + ++ EL 
Sbjct: 213 FKIAYQTSENADQIAGAVAPEKKALLDKANKTIQQLKSSGELD 255


>gi|237732155|ref|ZP_04562636.1| arginine-binding periplasmic protein 2 [Citrobacter sp. 30_2]
 gi|226907694|gb|EEH93612.1| arginine-binding periplasmic protein 2 [Citrobacter sp. 30_2]
          Length = 243

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 72/218 (33%), Gaps = 16/218 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++     F  + A+    GFD+D   AL   +    ++  +          AL+ 
Sbjct: 22  KISFGVSATYPPFESLDASNKIVGFDIDLATALCKQM---QAECTFTNHAFDSLIPALKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R   +   F     +     ++ KK    + + L G  I ++ GT
Sbjct: 79  KKYDAVISGMDITPERSKQVA--FTQPY-YANSALVIAKKDTYKTFADLKGKRIGMENGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L D           + ++  +      +  R D   GD + +     T   P   
Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLG 189

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248
           V    +         L  A+   +      ++    A+
Sbjct: 190 VATDKVTDPQYFGTGLGIAVRPDNKALLEKLNSALAAI 227


>gi|156934643|ref|YP_001438559.1| hypothetical protein ESA_02477 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532897|gb|ABU77723.1| hypothetical protein ESA_02477 [Cronobacter sakazakii ATCC BAA-894]
          Length = 243

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  +     +                +  G +     F  + A+    GFD
Sbjct: 1   MKKIILAAMLAGVAFHAAAA-------------DKISFGSSATYPPFESLDASNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          AL+ K+ D +    D T  R+  +   F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERQKQVA--FTA 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    S   L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSAIVIAKKGAYQSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       + P        +         L  A+   +  
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KNNPQLGTASEKVTDPQYFGTGLGIAVRPDNVA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLKKLNDALAAI 227


>gi|118587811|ref|ZP_01545221.1| probable amino acid ABC transporter, substrate-binding protein
           [Stappia aggregata IAM 12614]
 gi|118439433|gb|EAV46064.1| probable amino acid ABC transporter, substrate-binding protein
           [Stappia aggregata IAM 12614]
          Length = 245

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 90/226 (39%), Gaps = 11/226 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +   +A  L DI + G +K         F  + + G+++G+D+D  + ++  +  +  
Sbjct: 1   MIASPASAE-LKDILEAGKIKIATPENFPPFGSLGSEGEYEGYDIDVAKMIAEDLGVE-- 57

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++ +P+ +K+R   L++ + D++         R     + F         G        
Sbjct: 58  -LELVPVTSKQRIPFLETDKADLVIATLGANPERAK--SIWFSHAYAPFFSGAFAKPDVA 114

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +S++   SG  I V +GT  +L +             I F       AAY + + D    
Sbjct: 115 VSTIDDFSGKKIAVTSGTLEDLAITADAPE---DAEIIRFGDNAATIAAYVSGQADVIVT 171

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               + AL ++ND P  ++    II+ SP    +  G+ +    V+
Sbjct: 172 GN--MVALGISNDNPDFNLENKFIIANSPSFIGVKTGNIDLLQWVN 215


>gi|257872221|ref|ZP_05651874.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           casseliflavus EC10]
 gi|257806385|gb|EEV35207.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           casseliflavus EC10]
          Length = 267

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 15/254 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
             + L  IK  G L    +     F     +       G D+D    ++  +  +   + 
Sbjct: 23  ADNQLEAIKAAGVLNVATSADFAPFEFHALIDGKDTIVGADIDMVNEIADRLGVE---VN 79

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGI 137
            L L+      ALQ  + DI       T  R       F    +   Q  +++K      
Sbjct: 80  ILDLDFNAVLTALQQGKADIAVSGISATDER--KQTFDFTDNYFTPEQKLVVNKNNESAF 137

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S+  LSG  +  Q G+  E+ + D           +   +V  +    +    D    +
Sbjct: 138 DSIESLSGKKVGAQKGSIQEMIVQDQLA----DSQLVSIAKVPNLVNELKQGSIDGLVLE 193

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256
            +   +    ND      +  +       A A+ +G TE    ++     ++    +   
Sbjct: 194 SAVAESYVAQNDDLVITDVALEASEGDSYAIALPKGSTELQEELNSILKELIEDGTIDEY 253

Query: 257 TQKNINQVSKDTTN 270
            QKN +  +++   
Sbjct: 254 VQKNTDLANENAAQ 267


>gi|261820369|ref|YP_003258475.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261604382|gb|ACX86868.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 274

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 90/244 (36%), Gaps = 12/244 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
             +   F     +A +L  I  RG +    N      A ++++G+ KG  +D     +  
Sbjct: 6   VALAASFIPTIAHADVLEKIADRGVISVCTNVNNPPLAFLESSGETKGLHIDLLNDFTQR 65

Query: 71  I---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +        K+  +P+    R   LQ  + DIL  +   +  R+  +     P  Y  G 
Sbjct: 66  LSTQLGKTVKVDLVPVLPANRVQFLQQGKCDILFTSLTVSEERKKLVQFV-EPYYYAAGP 124

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             +  K    S+  ++ G +IC   G++  + L   F A+      + F+  +E+D + R
Sbjct: 125 ALLTKKGVTFSNWEEVKGKAICSNQGSSWNVPLEQKFGAN-----IVAFQTQQEVDQSLR 179

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEWYNIVSWT 244
             RC A   D S L A  L +                ++ P   A+   + ++   +S  
Sbjct: 180 DGRCAALVSDDSYLQARFLNDKEGIWKDYFIQNLTPFTEGPWGLAVRFNEPQFTQFISSV 239

Query: 245 HYAM 248
               
Sbjct: 240 IKDW 243


>gi|261368005|ref|ZP_05980888.1| glutamine transport system substrate-binding protein
           [Subdoligranulum variabile DSM 15176]
 gi|282569992|gb|EFB75527.1| glutamine transport system substrate-binding protein
           [Subdoligranulum variabile DSM 15176]
          Length = 286

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 9/213 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L    N     +     +G ++G DV+  +A++  +     ++Q   ++     LA Q
Sbjct: 62  GKLTMSTNAAFPPYEMTADDGSFEGIDVEIAQAIADKL---DLELQIDDMDFDAALLAAQ 118

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D++      T  R+  +   F        Q  I+ +   I+S+  ++G  I VQ G
Sbjct: 119 NGKSDMVMAGVTVTDERQTVM--DFSDTYANGIQVVIVPEDSDITSIDDMTGKMIGVQRG 176

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVE-EIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           TT +L  +D  +        +           A    + D    D +   A +     P 
Sbjct: 177 TTGDLYCSDTVENGGFGEENVTPYDNGLTAVQALMNGQVDCVVIDNA--PAQEFVKANPG 234

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              IL    +    A  + +G+T+  + ++   
Sbjct: 235 -LKILDTEYANEEYAIGVAKGNTQLLDAINGAL 266


>gi|218661455|ref|ZP_03517385.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli IE4771]
          Length = 259

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 81/263 (30%), Gaps = 22/263 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V  + +++   +     A      ++   ++  +      F  + AN   +GFD
Sbjct: 1   MRGALMVGGVAVVLAAVSPLPVAA------QEPMPMRVAVEGAFPPFNYLDANNKLQGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL         + Q++     +    L + + D +  +   +L R     +AF  
Sbjct: 55  IDIANALCE---TGKFECQFIIEKWDDMIPDLIAGKYDAIISSMSMSLER--RQKVAFTE 109

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y     FI  K   IS  S + LSG  + V + T  E     ++          VF  
Sbjct: 110 KYYNSPSVFIARKDSPISDVSPAALSGKKLGVTSSTAQESYANHFYP----DMKKTVFRS 165

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAIIQG 233
             E+       R D    D  A+Y         +         +           A+   
Sbjct: 166 SPELYKGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFGEGAGIAVRLD 225

Query: 234 DTEWYNIVSWTHYAMVTAEELGI 256
           D E    ++    A+       +
Sbjct: 226 DKERLARLNEALKAIKEDGTYDM 248


>gi|329115903|ref|ZP_08244620.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
 gi|326906308|gb|EGE53222.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
          Length = 288

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 16/270 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M + + +  L L  L  ++ S+N S        I+K+G +  G        + +    + 
Sbjct: 1   MKRHYALVGLGLAALTLSACSSNTSSQTSSWDKIEKKGVITVGTPKTYQPTSYMNDKNEL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++VD  + ++  +     K++++     + F +L S ++D+   N D T  R     +
Sbjct: 61  VGYEVDMMKEVAKRL---HVKVKFVETGFDQAFTSLDSGRVDLSINNFDVTKKRTTKYNM 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPI 174
           +        G   +        S   LS         A  T  + +A    A  + Y  +
Sbjct: 118 SEPYKYGVGGL-IVRADGTSGISKKDLSDWKGKKAAGAEGTESMKIAKKLGAKLVSYDNV 176

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS-KSPLAPAII 231
                +         R D    D  A   +   + +  P  ++ + D+    +     + 
Sbjct: 177 ---SNDVYLNDVANGRTDFIPNDYPAQKLFVDFMKSQNPKMNIKMADVQYNPTEQGIVMS 233

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           + D      ++ T  AM     L    +  
Sbjct: 234 KNDDSLLKEINKTIKAMKKDGSLKKISETY 263


>gi|153012084|ref|YP_001373295.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563972|gb|ABS17466.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 296

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 80/270 (29%), Gaps = 17/270 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
                 +I   I L   + S NA           ++ G +K   +     F  +   G+ 
Sbjct: 10  KNVMVFTIGAAISLLMITGSVNAQTAADSLPQKYRQSGVIKLVTDAKYPPFQSMNDAGEM 69

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF+VD   A+++ +           +        +QS + DI          R+    +
Sbjct: 70  VGFEVDLWNAIAARLNVKMDV---TSVAFDSLIPGVQSGRWDIAMEGITDNAERQKV--V 124

Query: 117 AFRPI-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMK 170
           +F            +  K   I+    L G     Q+GT     +          A   K
Sbjct: 125 SFVDYGYTTSSAYILEQKGTDINDHLDLCGRKGSAQSGTEWVDMITKEIGDACVAAGKEK 184

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                F   E    +  + R D      +    ++ +   P + V +  I+ + P   A 
Sbjct: 185 PTVSEFGTSEATLLSVYSGRSDFVLTSAALAGEIQKSAPHPVKVVPMG-ILPRMPSGIAF 243

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            + + +    +      +  + +      N
Sbjct: 244 RKNEADLGEALLAALKEVKASGDYDKIYAN 273


>gi|167821099|ref|ZP_02452779.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 91]
          Length = 240

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 77/233 (33%), Gaps = 6/233 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +    I      + +A  L  I     +        V F  +       GF  D   A+ 
Sbjct: 1   MAIAAIASSLIATLHARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVV 60

Query: 69  ----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
                 +     +I Y+P+  + R   L +   D+   +T  T  R     ++F    ++
Sbjct: 61  DDVRKKLKMPGLQIAYIPVTRQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFY 118

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
            G   ++ K   I   + L+G ++   AG+T E  +  Y   H++    +  +       
Sbjct: 119 AGTRVLVKKASRIRGYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPR 178

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              + R      D   L+ ++     P    +  D +   P    + +GD   
Sbjct: 179 MVESDRTAVLALDDVLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|238920484|ref|YP_002933999.1| glutamine ABC transporter periplasmic protein [Edwardsiella
           ictaluri 93-146]
 gi|238870053|gb|ACR69764.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 248

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +T  V F   K +  + GFD+D   A++  +          P++      ALQ++
Sbjct: 27  LIVATDTAFVPFEFKKGD-KYVGFDIDLWDAIAKQL---HLSYTLKPMDFSGIIPALQTR 82

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
            +D+       T  R+    + F    Y  G   ++      I  V  L G  + V++GT
Sbjct: 83  NVDLALAGISITEERKK--AIDFSDGYYNSGLMVMVKSGNAQIHGVKDLDGKVLAVKSGT 140

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                  DY KAH        F  ++         R DA   D   +     T     + 
Sbjct: 141 AGV----DYAKAHVKSKDLRQFPNIDNAYLELATGRADAVLHDTPNILYFIQTAGNG-QF 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + D +       A  +G       V+    
Sbjct: 196 KAVGDSLEAQAYGIAFPKGSDALRGQVNDALK 227


>gi|259651118|dbj|BAI43280.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 498

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 32/321 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    K     +  LI+    +   +         +     G +     F     +  + 
Sbjct: 13  MKRVWKWCVAGVAALILTLSLAMPVSTQA-----AKKTYVIGTDVTYAPFEFADKHNQYV 67

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D  +A++ A   +  ++   PL       AL++ QID +      T  R+    + 
Sbjct: 68  GIDIDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM- 123

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                Y       + K  G++ +  L G  + ++ GT                +  + F+
Sbjct: 124 -SDPYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236
               +          A   D   L     T     +  +       S    A  +G ++ 
Sbjct: 181 DSNNMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDE 237

Query: 237 --------WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
                      + +   YA + A+ LG   +   + +   T    + FLG+ + +     
Sbjct: 238 LDQKFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLM 297

Query: 289 LGLTKDWTYRIIR-----HMG 304
            GL +     I+       +G
Sbjct: 298 NGLRETMVVTIVAIFFATAVG 318


>gi|119488108|ref|ZP_01621552.1| hypothetical protein L8106_11942 [Lyngbya sp. PCC 8106]
 gi|119455397|gb|EAW36536.1| hypothetical protein L8106_11942 [Lyngbya sp. PCC 8106]
          Length = 301

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 94/269 (34%), Gaps = 23/269 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M     +S+  L++       + A   L  + + G L+ G+    + F+    + +++G+
Sbjct: 1   MNTKITISLFSLLLTVGFQLPSLAETVLEKVNRTGVLRVGVREDAIPFSYSNESNNFEGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            V+    +   +    +   ++Q  P+  + RF ++++  +D++      T+ RE    +
Sbjct: 61  SVELMELIHLRLEQELNRSIQLQLKPVTIQNRFSSVENGTVDLVCGADSITVERE--QTV 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLS-----------GASICVQAGTTTELTLADYFK 165
            F    +  G   ++ ++        L               I    GTTT+      + 
Sbjct: 119 EFSIPFFTTGIQLLVQQENAERFDPTLRTEEELEQIAPGNVLIAFIQGTTTDTNFKPIYP 178

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISK 223
             + +    +     E     +++  DA   D   L           +   L   + +S 
Sbjct: 179 EADWQ----LLGSRTEGLRRLKSNEIDAIASDGILLIGEIWKQGEDMKSYRLIPQEPLSF 234

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                   Q +T+W + ++ T  +    E
Sbjct: 235 ENYGCIFPQNNTDWGSFINSTITSTENTE 263


>gi|330982619|gb|EGH80722.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 179

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 64/196 (32%), Gaps = 18/196 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     I  S+++L G  I VQ G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYT 195
            EI     A R D   
Sbjct: 164 NEIYLDIGAGRLDGTV 179


>gi|313115990|ref|ZP_07801417.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310621754|gb|EFQ05282.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 279

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 42/274 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----------------------------SILGDIKK 32
           M K    S L    L   + +  A                              L  + +
Sbjct: 1   MKKISRRSFLAAAGLSVAALALTACGGSSASTASSVASSAASSEAASTSAAAGELTTV-E 59

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G L    N     +      G+++G D++  +A++  +     ++Q   ++     L++
Sbjct: 60  AGKLTMATNAAFPPYEMTTDAGEFEGIDIETAQAIADKLG---LELQIDDMDFDAALLSV 116

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q  + DI+      T  R+  +   F        Q  I+ +   I+S   L+G  I  Q 
Sbjct: 117 QQGKADIVMAGVTVTDERKAVM--DFSDSYATGIQSIIVPEGSDIASPDDLAGKKIGTQR 174

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT  +  +D F       + + ++       A    + DA   D +   A +     P 
Sbjct: 175 GTTGYIYCSDDFG----DENVVAYDDGLTAVQALNNGQVDAVVIDNA--PAQEFIAANPG 228

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              IL    ++   A  + +G +   + V+    
Sbjct: 229 -LKILDTSYAEEDYAIGMAKG-SSLEDAVNAALK 260


>gi|78065769|ref|YP_368538.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
           sp. 383]
 gi|77966514|gb|ABB07894.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 264

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G + +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITDQRK--HAVAFTDAIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     LT  +  
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDAEAGSKGFLTKPQGQ 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241


>gi|330502655|ref|YP_004379524.1| cationic amino acid ABC transporter periplasmic binding protein
           [Pseudomonas mendocina NK-01]
 gi|328916941|gb|AEB57772.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas mendocina NK-01]
          Length = 257

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 13/230 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ GI      FA    +G   GFD D   AL   +  +    +++         AL+ +
Sbjct: 25  LRIGIEAAYPPFAFKTPDGQIAGFDYDIGNALCEEMKVE---CKWIEQEFDGLIPALKVR 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGT 154
           + D +  +   T  R+    + F    Y       M     I      L G  I VQ  +
Sbjct: 82  KFDAVLSSMSITEDRKK--SVDFTGKYYATPAKLAMKAGTEIKDPLVDLKGKKIGVQRSS 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             +    D F         + +    E+    ++ R DA   D   +    L  D     
Sbjct: 140 VYDRYATDIFAPAG--AEIVRYSSQNEVFLDMQSGRLDATLADSVNIDDGFLKTDGGKGF 197

Query: 215 VILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
             +                A+ +GD    + +S    A+    +    Q 
Sbjct: 198 AFVGPDFTDVKYFGEGQGIAVRKGDKALADKISAAILAIRANGKYKEVQD 247


>gi|218676307|ref|YP_002395126.1| ABC transporter: Substrate binding protein precursor [Vibrio
           splendidus LGP32]
 gi|218324575|emb|CAV26093.1| ABC transporter: Substrate binding protein precursor [Vibrio
           splendidus LGP32]
          Length = 269

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 84/253 (33%), Gaps = 18/253 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K    ++L L  +   + ++    L  I +RG L+ G++T  V +A     GD  G
Sbjct: 1   MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  + L+         ++++P        +L SK+ D++      T  R     + F
Sbjct: 59  FEIDVAKRLAEDSGWK---VEFVPTAWDGIIPSLLSKKFDVIIGGMSITEARAK--SVLF 113

Query: 119 RPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                  G     +K+        S        I  + G  T     + F         +
Sbjct: 114 TEPYSHSGVQLAANKELAEGFTQISDFDSRRVKIAARRGAFTVQVARETFPKAK----VL 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+   +           A            + N   +  +   + +SK   A A+  G+
Sbjct: 170 QFDDDAQAFQEVLNGNAHAVIASSPKPEHETIKNAD-TLFIPFEERLSKGNEAFAVRLGE 228

Query: 235 TEWYNIVSWTHYA 247
           T+     +    A
Sbjct: 229 TDKAEFFNEWIKA 241


>gi|114046425|ref|YP_736975.1| extracellular solute-binding protein [Shewanella sp. MR-7]
 gi|113887867|gb|ABI41918.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           MR-7]
          Length = 244

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 17/228 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD++  + ++         ++   +     
Sbjct: 23  KSNDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
            +AL S +ID ++     T  R+    + F    Y   Q  +++K    I ++  +    
Sbjct: 80  IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNESIHTLDDIKDKH 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ G+T +        +     +   F    E     +  + D    D          
Sbjct: 138 FAVQLGSTAD------MMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           N    +  ++           A+ +   E  N ++ T   +  + +  
Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQ 236


>gi|291521638|emb|CBK79931.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 298

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 87/278 (31%), Gaps = 43/278 (15%)

Query: 1   MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKR------------- 33
           M K   + +  ++ +                T+ S  AS      +              
Sbjct: 1   MKKGLALCMAAVLAMGCLLTGCGSSDTGAKSTTESAAASTEAVGTETAGTEAAGTETAGN 60

Query: 34  -GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
                 G +     +     NG++ GFD+D  + +      +  K    P++   + + L
Sbjct: 61  GKTFTVGFDASFPPYGYQ-ENGEYVGFDLDLAQEVCDRNGWELVK---TPIDWDAKNIEL 116

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
               ID +          +      + P    + Q F ++K  GI   + L+G ++ VQA
Sbjct: 117 NGGSIDCIWNGFTMNGRED---DYTWTPAYINNTQVFAVNKNSGIKKAADLAGKNVLVQA 173

Query: 153 GTTTELTLADYFKA-----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
            ++    L D          +           E       A   DA   D       +  
Sbjct: 174 DSSALAALQDEENTDIKALADSFGSLTQVPDYESALMELEAGSADAVAMDEGVALTKQAQ 233

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           ND     VIL D+IS+     A  +G+ E  + V  T 
Sbjct: 234 NDN---IVILDDVISQEQYGIAFKKGNDELRDQVWSTL 268


>gi|258509858|ref|YP_003172609.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|257149785|emb|CAR88758.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
          Length = 486

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 32/321 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    K     +  LI+    +   +         +     G +     F     +  + 
Sbjct: 1   MKRVWKWCVAGVAALILTLSLAMPVSTQA-----AKKTYVIGTDVTYAPFEFADKHNQYV 55

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D  +A++ A   +  ++   PL       AL++ QID +      T  R+    + 
Sbjct: 56  GIDIDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM- 111

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                Y       + K  G++ +  L G  + ++ GT                +  + F+
Sbjct: 112 -SDPYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFD 168

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236
               +          A   D   L     T     +  +       S    A  +G ++ 
Sbjct: 169 DSNNMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDE 225

Query: 237 --------WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
                      + +   YA + A+ LG   +   + +   T    + FLG+ + +     
Sbjct: 226 LDQKFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLM 285

Query: 289 LGLTKDWTYRIIR-----HMG 304
            GL +     I+       +G
Sbjct: 286 NGLRETMVVTIVAIFFATAVG 306


>gi|227112026|ref|ZP_03825682.1| arginine-binding periplasmic protein 1 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 243

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I+  +     + +  A           ++         F  V AN   +GFD
Sbjct: 1   MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNRIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +   +           L+ ++ + +    D T  R     ++F  
Sbjct: 48  IDLANALCKEM---QATCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ ++ L+G  + VQ GTT +  L       +     + ++  +
Sbjct: 103 PYYDNSAQFIAQKG-KVADIAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD + +      ND  +     +         L  A+ Q + E  
Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNDALATVGQKVTDKGYFGVGLGIAVRQNNDELL 217

Query: 239 NIVSWTHY 246
                   
Sbjct: 218 KKFDTALN 225


>gi|322834166|ref|YP_004214193.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321169367|gb|ADW75066.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 264

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 22/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  +                      L+ G +     F    A G   GF+
Sbjct: 1   MMKKTLAAAVMALTFGSALAHAEGET---------LRVGADLSYPPFQFRDAAGTPTGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +     K  Y+  +      +L +K++D +S        R++     F  
Sbjct: 52  IDVTNAICKEM---KVKCDYVVSSFDAEIPSLIAKKVDFISPQGATEKRRKVIDFSDFV- 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   +  +      + +   L G  I VQ G+  E+    +++   +    + +   +
Sbjct: 108 -YHIPTKLVVQKGSPLLPTPESLQGKRIAVQQGSIQEMYANTFWQPKGVD--VVAYADQD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
            I     A R D       A+    L         +    +    L     +  + +GD 
Sbjct: 165 TIYQDLVAGRLDGALSPAVAVTFGFLNKPEGKNFTLTGPEVRDDKLFSIGSSYGLRKGDD 224

Query: 236 EWYNIVSWTHYAMVTAE 252
               +++    A + A+
Sbjct: 225 HIKKLLNDGL-AKIIAD 240


>gi|86144265|ref|ZP_01062597.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. MED222]
 gi|85837164|gb|EAQ55276.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. MED222]
          Length = 269

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 84/253 (33%), Gaps = 18/253 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K    ++L L  +   + ++    L  I +RG L+ G++T  V +A     GD  G
Sbjct: 1   MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  + L+         ++++P        +L SK+ D++      T  R     + F
Sbjct: 59  FEIDVAKRLAEDSGWK---VEFVPTAWDGIIPSLLSKKFDVIIGGMSITEARAK--SVLF 113

Query: 119 RPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                  G     +K+        S        I  + G  T     + F         +
Sbjct: 114 TEPYSHSGVQLAANKELAEGFTQISDFDSRRVKIAARRGAFTVQVARETFPKAK----VL 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+   +           A            + N   +  +   + +SK   A A+  G+
Sbjct: 170 QFDDDAQAFQEVLNGNAHAVIASSPKPEHETIKNAD-TLFIPFEERLSKGNEAFAVRLGE 228

Query: 235 TEWYNIVSWTHYA 247
           T+     +    A
Sbjct: 229 TDKAEFFNEWIKA 241


>gi|312866756|ref|ZP_07726970.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parasanguinis F0405]
 gi|311097837|gb|EFQ56067.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parasanguinis F0405]
          Length = 300

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 63/210 (30%), Gaps = 16/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L      +   +A           +K   +T    F    ++  +KG D
Sbjct: 1   MKKKLLACLLFLFPFVAFAGHAHAET---------IKVVFDTAYAPFEFKDSDQTYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++     D  K             A+Q+ Q D +      T  RE         
Sbjct: 52  VEILDKVAEINGWDLDK---SFPGFDAAVNAVQAGQADAIMAGMTKTTEREKV--FTMSD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+  SQL G ++ V+ GT  +  L      +  K     F+  +
Sbjct: 107 TYYDTKVVIATKKADKITKYSQLKGKTVGVKNGTAAQRFLDKNKDKYGYK--IKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D   +         
Sbjct: 165 LMYNSLSAGAVDAVMDDQPVIQYAIQKGQD 194


>gi|91786595|ref|YP_547547.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91695820|gb|ABE42649.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 277

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   +    L +   L     S +A  L +I     +  G+N  L          +  
Sbjct: 7   MARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFNDKNEID 66

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  R L   +         + + + +R   + S +ID +      T  R+    + 
Sbjct: 67  GFDVDVARKLGELLGVKTE---IVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKV--ID 121

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    + +  G +  K K      +L+     +    G+T      +           ++
Sbjct: 122 FTVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGSTPVKLAQEKLPKA----QLLL 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +   +   A    R DA    +  +   + T     +  I+   I     A  + +G+ 
Sbjct: 178 LDNYPDAVRAIAQGRADAMIDVMDFM--TEHTAKHKVDWRIVDAPIDVYFCAVGVQKGND 235

Query: 236 EWYNIVSWTHY 246
                +S    
Sbjct: 236 ALREKLSGAIK 246


>gi|156934639|ref|YP_001438555.1| hypothetical protein ESA_02473 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532893|gb|ABU77719.1| hypothetical protein ESA_02473 [Cronobacter sakazakii ATCC BAA-894]
          Length = 249

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 16/215 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + A     GFDVD   AL   I    +   +          AL+ 
Sbjct: 28  TIRFATEASYPPFESMDAGNKIVGFDVDLANALCKEI---EATCTFTNQAFDSLIPALKF 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K++D +    D T  RE    + F    Y +   F+  + K  SS+ QL G  + VQ GT
Sbjct: 85  KRVDAVMAGMDITPEREK--QVLFTTPYYDNSALFVGLQGKN-SSIEQLKGKRVGVQNGT 141

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  + D           + ++  +      +  R DA  GD + +         P   
Sbjct: 142 THQKYITDKHPE----ITTVPYDSYQTARLDLQNGRIDAVFGDTAVVTEWL--KTNPKLA 195

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245
            +   +  K      L  A+ QG+TE     +   
Sbjct: 196 AVGDKVTDKDYFGTGLGIAVRQGNTELQQKFNTAL 230


>gi|145296749|ref|YP_001139570.1| hypothetical protein cgR_2653 [Corynebacterium glutamicum R]
 gi|140846669|dbj|BAF55668.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 344

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 12/220 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           I  RG +  G++      +      G+ +GF+V+  R +S  IF DP+K+ +  + + +R
Sbjct: 89  IVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDR 148

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             +L    +DI+ R+   T  R     + F           +  +  GI+S++ L G +I
Sbjct: 149 LRSLDQGDVDIVIRSVTITDERAKL--VEFSTPYLRTQTRMLTMESSGITSIADLPGHTI 206

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           CV  G+T+                 +      +   A + H+     GD   L  +   +
Sbjct: 207 CVTDGSTSLQRARTIAPEA----SILKTRNWSDCLMALQQHQAQVILGDDVILSGIAAQD 262

Query: 209 DRPSEHVILPDIISKSPLAPAIIQG--DTEWYNIVSWTHY 246
                  IL   +       A      +T+   ++   +Y
Sbjct: 263 P---YTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNY 299


>gi|19553943|ref|NP_601945.1| ABC-type transport system, periplasmic component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62391586|ref|YP_226988.1| ABC-type amino acid transport system, component [Corynebacterium
           glutamicum ATCC 13032]
 gi|21325522|dbj|BAC00144.1| ABC-type amino acid transport system, periplasmic component
           [Corynebacterium glutamicum ATCC 13032]
 gi|41326928|emb|CAF20772.1| ABC-type amino acid transport system, secreted component
           [Corynebacterium glutamicum ATCC 13032]
          Length = 344

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 12/220 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           I  RG +  G++      +      G+ +GF+V+  R +S  IF DP+K+ +  + + +R
Sbjct: 89  IVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDR 148

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             +L    +DI+ R+   T  R     + F           +  +  GI+S++ L G +I
Sbjct: 149 LRSLDQGDVDIVIRSVTITDERAKL--VEFSTPYLRTQTRMLTMESSGITSIADLPGHTI 206

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           CV  G+T+                 +      +   A + H+     GD   L  +   +
Sbjct: 207 CVTDGSTSLQRARTIAPEA----SILKTRNWSDCLMALQQHQAQVILGDDVILSGIAAQD 262

Query: 209 DRPSEHVILPDIISKSPLAPAIIQG--DTEWYNIVSWTHY 246
                  IL   +       A      +T+   ++   +Y
Sbjct: 263 P---YTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNY 299


>gi|117624499|ref|YP_853412.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli APEC O1]
 gi|218559222|ref|YP_002392135.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli S88]
 gi|115513623|gb|ABJ01698.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli APEC O1]
 gi|218365991|emb|CAR03735.1| histidine/lysine/arginine/ornithine transporter subunit ;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli S88]
 gi|323952102|gb|EGB47976.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H252]
          Length = 260

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K   I  +V  L G  I V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRIGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +++    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTARRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|257460304|ref|ZP_05625407.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257442369|gb|EEV17509.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 262

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 103/247 (41%), Gaps = 17/247 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F ++ L L  L        A+ L  IKK   ++ G+      F+ +  +G ++GF++ 
Sbjct: 2   KVFVLAALLLGFLS-------ANSLDQIKKDRLVRIGVYNDQPPFSAL-VDGKYRGFEIA 53

Query: 63  FCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               L   IF D P K++++P+ A  R  ALQ  + D++      T  R     + F   
Sbjct: 54  LGEKLGKEIFGDNPGKVKFIPITASRRISALQRNEADMVIATFTPTPARAK--KVDFSEP 111

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +    G +  K + ++S  QL    I V   +     + ++ +    K +        +
Sbjct: 112 YFKVQVGVLAKKDENVTSFDQLRKKRIFVIKHS----PIHNFLRKAGFKKNLNFCASSAK 167

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A++  +   +  D   L+A  + +++    V+L  +  ++  A A+ +G+     ++
Sbjct: 168 CYRAFKRAKNAVHVDDNLILHAYAIIDNK--TQVVLDGLGKQTYNAIAVQKGNNALLELI 225

Query: 242 SWTHYAM 248
           + +   +
Sbjct: 226 NTSLAGL 232


>gi|239833592|ref|ZP_04681920.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821655|gb|EEQ93224.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 292

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 78/259 (30%), Gaps = 20/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +   IL     +     L  + ++  +    N G    + +  +    GFD
Sbjct: 18  MRKIITIMGIAGAILATGFTAHAGETLDRVMEKKAMVVATNAGWPPQSFLDDSNQLVGFD 77

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   +      + +   +           + D+   +   T  R  +  + F  
Sbjct: 78  VDVANEIGKRLG---VAVSFETPDWATLTGGRWQGRYDVGVGSVTPTKAR--ANVIDFAG 132

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--- 177
           I Y+    +++HK     SV+ L G  I V+  TT+E       +       PI ++   
Sbjct: 133 IYYYSPYVYVVHKDSEAKSVADLKGKVIGVETATTSEDYARHQLEIDAPGLPPIEYKLEP 192

Query: 178 -------RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                           R     R DA         A     +     ++  D   + PL 
Sbjct: 193 GEIRTFADSMLPFDDLRLGDGVRIDAIV--APEQTAQNAIKNGYPVKILEGDYAFREPLV 250

Query: 228 PAIIQGDTEWYNIVSWTHY 246
               + D EW   +     
Sbjct: 251 VIAEKNDPEWTAKIGEIIK 269


>gi|171317824|ref|ZP_02907003.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171096989|gb|EDT41857.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 264

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 13/221 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KVKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G+  +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211
           GT  E      +         + ++  +   A  ++ R DA +    +            
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202

Query: 212 SEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
                   +     L       + + D      +      +
Sbjct: 203 GFGFAGGTVTDAEILGSGVGFGLRKNDAALKTALDQALKGL 243


>gi|28899839|ref|NP_799444.1| putative cyclohexadienyl dehydratase signal peptide protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839887|ref|ZP_01992554.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus AQ3810]
 gi|260901310|ref|ZP_05909705.1| prephrenate dehydratase [Vibrio parahaemolyticus AQ4037]
 gi|308094376|ref|ZP_05888873.2| prephrenate dehydratase [Vibrio parahaemolyticus AN-5034]
 gi|308095442|ref|ZP_05905921.2| prephrenate dehydratase [Vibrio parahaemolyticus Peru-466]
 gi|308125390|ref|ZP_05775000.2| prephrenate dehydratase [Vibrio parahaemolyticus K5030]
 gi|28808091|dbj|BAC61328.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746595|gb|EDM57583.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus AQ3810]
 gi|308087930|gb|EFO37625.1| prephrenate dehydratase [Vibrio parahaemolyticus Peru-466]
 gi|308090422|gb|EFO40117.1| prephrenate dehydratase [Vibrio parahaemolyticus AN-5034]
 gi|308109884|gb|EFO47424.1| prephrenate dehydratase [Vibrio parahaemolyticus AQ4037]
 gi|308114185|gb|EFO51725.1| prephrenate dehydratase [Vibrio parahaemolyticus K5030]
          Length = 258

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F   +CL+++     +   S L +I  +G L+ G                 ++GF
Sbjct: 1   MKKILFALGICLLMVTQVVHAQ--SRLQEILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S           +    GT  E  + ++F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWEDFNKPDVKVAATLGTVQEKMVKEFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V +      +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVDKFKQ-LAIVPVKAPRRPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|307299246|ref|ZP_07579047.1| extracellular solute-binding protein family 3 [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306915042|gb|EFN45428.1| extracellular solute-binding protein family 3 [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 255

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 97/250 (38%), Gaps = 22/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L  + L F       S++ D+K+RG L+ G + G +       +GD  G +
Sbjct: 1   MKKLLLVLVLLCMTLAF------GSLIDDVKQRGVLRVGQDAGYMPLYGTNPDGDRIGLE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +     K++++ +N      AL S + DI+      T  R  +L + F  
Sbjct: 55  VDILKKMAEIL---DVKLEFVVVNWDGIIPALVSNKFDIIWSAMTITPER--ALRVNFTD 109

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                GQ  +   +K +   +   L+     I VQ G+T                   +F
Sbjct: 110 PYLTVGQIILYNTNKYELPPTEEDLNDPDVKIAVQLGSTGAEAANRLLSEA----QIFMF 165

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E ++E      + R DA   D       +    +  +  +  D++++     AI +GD E
Sbjct: 166 ETIDEAAFQVASGRADAMIFDSI---YARFMAKKYDQLEVTEDLLTREDFGVAIPKGDFE 222

Query: 237 WYNIVSWTHY 246
               ++    
Sbjct: 223 TLQWMNTFIQ 232


>gi|256027816|ref|ZP_05441650.1| amino acid-binding protein [Fusobacterium sp. D11]
 gi|289765769|ref|ZP_06525147.1| amino acid-binding protein [Fusobacterium sp. D11]
 gi|289717324|gb|EFD81336.1| amino acid-binding protein [Fusobacterium sp. D11]
          Length = 251

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 86/262 (32%), Gaps = 23/262 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + ++ L+ +  +             K   +  G N     F  +       GFD
Sbjct: 1   MKKFFKLMLMSLLSVVISISVFA--------KSNVVYVGTNAEFAPFEYL-EKNKIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K+ID++      T  RE    +AF  
Sbjct: 52  IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKIDMVIAGMSATPEREK--AVAFSK 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  I       + S   LSG  + V  G T +  ++              F   
Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLSGKKVGVMLGFTGDTVVSKI-----KGVKIERFNAA 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ DA   D     A K T +   + VI      +   A A  + D E  N
Sbjct: 162 YAAILALSQNKVDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218

Query: 240 IVSWTHYAMVTAEELGITQKNI 261
            V+     +    E     KNI
Sbjct: 219 KVNAALDKIKANGEYDKILKNI 240


>gi|260597264|ref|YP_003209835.1| Arginine-binding periplasmic protein 2 [Cronobacter turicensis
           z3032]
 gi|260216441|emb|CBA29553.1| Arginine-binding periplasmic protein 2 [Cronobacter turicensis
           z3032]
          Length = 243

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 79/252 (31%), Gaps = 29/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  + L   +                +  G +     F  + A+    GFD
Sbjct: 1   MKKIILAAMLAGVALHAAAA-------------DKISFGSSATYPPFESLDASNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          AL+ K+ D +    D T  R+  +   F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERQKQVA--FTA 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++ KK    S   L G  I ++ GTT +  L D           + ++  +
Sbjct: 103 PY-YANSAIVIAKKGAYKSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 +  R D   GD + +       + P        +         L  A+   +  
Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KNNPQLGTATEKVTDPQYFGTGLGIAVRPDNVA 215

Query: 237 WYNIVSWTHYAM 248
               ++    A+
Sbjct: 216 LLKKLNDALAAI 227


>gi|297153789|gb|ADI03501.1| serine/threonine protein kinase [Streptomyces bingchenggensis
           BCW-1]
          Length = 669

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 8/203 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  GI     G       G + GFDVD    ++ A+  +P+ I++    + +R   L+
Sbjct: 438 KKITIGIKFDQPGLGFKTPAGRYSGFDVDVATYIAKALGHNPADIEWKETLSSDREAVLE 497

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQA 152
             ++D +      T  RE    + F            I      + +   L+G  +C   
Sbjct: 498 RGEVDFIVAAYAVTDAREK--KVDFAGPYLEAHQDVLIRGDDTSVRTAQDLNGRRVCAPT 555

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+ + L +   F     +             +  +    DA T D + L           
Sbjct: 556 GSVSALNVRTKFA---PQAQVSERATYALCLSDLKDGAVDAVTADDAILAGYAAREPDSF 612

Query: 213 EHVILPDIISKSPLAPAIIQGDT 235
           E   L   ++       + +G  
Sbjct: 613 ELGGL--AMTDERYGIGVAKGSP 633


>gi|170751307|ref|YP_001757567.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657829|gb|ACB26884.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 261

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 65/225 (28%), Gaps = 13/225 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  I+    L+ G       F    A+G   GFDV+  R ++  +   P   Q+L   
Sbjct: 29  DDLDAIRAAKTLRIGTEGTYAPFTFHDASGQLVGFDVEIGRKVAEQLGVTP---QFLEGK 85

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQL 143
                  L  K+ D++      T  R+      F           I    +  I S + L
Sbjct: 86  WDGLIAGLDGKRYDVVINQVGITKERQA--KFDFSEPYIRARAVLITRADRSDIKSFADL 143

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G     Q+ ++    LA+   A       +  +  ++        R DA   D  +   
Sbjct: 144 KGKK-AAQSLSSNFARLAEQSGA-----ELVGTDGFDQSVQLVLTGRADATVNDSLSFLD 197

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                       I  +          + + +      +     A+
Sbjct: 198 FHKQKPNAPV-KIAAEQADADASGIIMRKNNPALKAAIDKALEAI 241


>gi|269956046|ref|YP_003325835.1| extracellular solute-binding protein family 3 protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304727|gb|ACZ30277.1| extracellular solute-binding protein family 3 [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 282

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 12/227 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
                 +   N +        G +K G+     G        D  GFDVD    ++  + 
Sbjct: 20  SACSSGTPGENGTTGD---AEGSIKIGVKFDQPGLGFQDGA-DHTGFDVDVATYVAEKLG 75

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               +IQ++   + +R   LQ+ Q+D++      T  R+    + F    +  GQ  ++ 
Sbjct: 76  YSVDQIQWVESPSAQREQMLQTGQVDMIFATYSITDARKEV--IDFAGPYFVAGQDLLVA 133

Query: 133 KKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA--H 189
                I+    L+G ++C   G+T+   + D    H    + +      E   A  A   
Sbjct: 134 ADNTDINGPEDLAGKNLCSVTGSTSAQKIKD---EHADTVNLLERPGYAECVTALVAANA 190

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             DA T D   L  L  T+    +  ++    S       + +G   
Sbjct: 191 EIDAVTTDDIILAGLAATDANRGKVKVVGAPFSTERYGVGLPKGSDR 237


>gi|152971238|ref|YP_001336347.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956087|gb|ABR78117.1| lysine-, arginine-, ornithine-binding periplasmic protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 247

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F+   A GD+ GFD+D    L S I     K  ++  +      +L++K
Sbjct: 15  IRIGTDATYAPFSSKDAKGDFVGFDIDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAK 71

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      I  K   I  ++  L G  + V  G+
Sbjct: 72  KIDAIISSLSITEKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGS 129

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    D +++  +    + ++  + I +   A R DA   D  A     L      + 
Sbjct: 130 TQEAYANDRWRSQGVD--VVAYQNQDLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDF 187

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +             + + D E                E+       ++++K   
Sbjct: 188 AFAGPSVKDKKYFGDGTGIGLRKDDAELKAAFDKAL------GEMRKDGT-YDKMAKKYF 240

Query: 270 NPDV 273
           + +V
Sbjct: 241 DFNV 244


>gi|254250416|ref|ZP_04943735.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124879550|gb|EAY66906.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 280

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 84/234 (35%), Gaps = 11/234 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
           F+  +   S L  I +R  +  G+      F  +        GF+VD    ++  +  D 
Sbjct: 23  FSGVARADSTLDRIHQRHKIAIGVILSGPPFGSLDPATQKPVGFNVDLANDVAKRLGVD- 81

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++  P+    R   LQ  ++D L  N + T  R   L  A  P   F G   I  K  
Sbjct: 82  --VELTPVQPSNRVQFLQQGKVDALIANMELTTERAEILSYAPTPF-EFIGGALIARKDS 138

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI + + + G  +CV  G+     LA  + A         F    E   A R + C A  
Sbjct: 139 GIKTWADVRGKPVCVSQGSNYTKPLATEYGA-----QVKAFRGQPESLLALRGNNCVAAV 193

Query: 196 GDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                L  L   N    ++   LP  +  SP    + +G+T+  + +       
Sbjct: 194 HVAPTLRMLVARNPDWKDYATPLPTDLIPSPAVIWVRKGETDTQSALDRIVQDW 247


>gi|283458862|ref|YP_003363508.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Rothia mucilaginosa DY-18]
 gi|283134923|dbj|BAI65688.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Rothia mucilaginosa DY-18]
          Length = 272

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 81/241 (33%), Gaps = 11/241 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             ++L       +S +++ + L  IK  G ++ G+      F+  ++NG   GF+ +   
Sbjct: 19  LAALLAACGSSSSSTASSTNKLEAIKSAGKIRVGLEGTYRPFSFHESNGTLVGFEKEIAD 78

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +        ++          + + + DI+  N   T  R       F     + 
Sbjct: 79  LIAKDLGVTAE---FVETPWDSLIAGVDADRYDIVINNVSATDER--KQKYDFSVPYLYS 133

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                + K   + +VS++SG S      +          +A       +V    +E    
Sbjct: 134 EPKVAVKKDSSLQNVSEISGHSSAQSETS----NFRKMVEAKGAS--IVVVSGFDEAIEQ 187

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + R +    D  +       +   +  ++  D+ + S  +  + +G     N +  + 
Sbjct: 188 VLSGRAEMTANDSVSFAEYFKEHPDANLRLLSGDLGTGSNSSILMAKGQDALRNAIDESL 247

Query: 246 Y 246
            
Sbjct: 248 K 248


>gi|302873343|ref|YP_003841976.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|307688487|ref|ZP_07630933.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|302576200|gb|ADL50212.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
          Length = 263

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 10/235 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           FTS     S   ++KK      G +     +  +  NG++ GFD+D  + +      +  
Sbjct: 15  FTSLVGCGSKSSEVKKE-KFTVGFDAEFEPYGFMNENGEYVGFDLDLAQEVCKR---NNW 70

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           ++   P++   + + L+S  ID +          +      +      + Q F+     G
Sbjct: 71  ELVKQPIDWDAKDMELESGSIDCIWNGFTINGREDK---YTWSSPYVNNSQVFVATTSSG 127

Query: 137 ISSVSQLSGASICVQAGTT--TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           +   + L+G  + VQ  ++    L   +     N     + F               D+ 
Sbjct: 128 VKKKNDLAGKIVAVQKDSSALAALNAEENAGLKNSFAKIVEFGDYNTAFMELEMGTVDSI 187

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             DI    A   + D      IL   +S        + G+ +  + V  +   M+
Sbjct: 188 AMDIGVAKAQMESRDNKK-FNILEQYLSTEKYGVGFLLGNEKLRDKVETSLQEML 241


>gi|260583445|ref|ZP_05851193.1| glutamine ABC transporter glutamine-binding protein/permease
           [Granulicatella elegans ATCC 700633]
 gi|260158071|gb|EEW93139.1| glutamine ABC transporter glutamine-binding protein/permease
           [Granulicatella elegans ATCC 700633]
          Length = 479

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 98/292 (33%), Gaps = 19/292 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K F++S+L ++    ++    A                +T    F     +G++ G D+
Sbjct: 9   KKSFWISLLGILFFLLSTPIEAA--------TKKYTIATDTTFAPFEFQDTSGNYVGIDM 60

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++     +  +I+   L       AL++ Q+D +      T  R+      F   
Sbjct: 61  DLMNAIAKE---ENFEIEIKALGFNAAVQALEAGQVDAVIAGMSMTDERK--QKFDFTDS 115

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G G  +     IS+  +L G ++ V+ GT      +         +    FE    
Sbjct: 116 YFDSGIGMAVSTSSNISTYEELRGKNVAVKIGTQGASFASSI--KDQYGFTISTFEDSAN 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI-IQGDTEWYNI 240
           +     +    A   D   L     +N  P       +  ++     A+    +TE+   
Sbjct: 174 MYQDVVSGNSVAAFEDYPVLGYAIRSNHLPMTLTSYKEQATQ--YGVAVLKNQNTEFIEA 231

Query: 241 VSWTHYAMVTAEELGITQKN-INQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
            +     + +  E      N I      TT+ +    LG+ K++      GL
Sbjct: 232 FNRGLATLKSNGEYDKIINNYIGTDDSTTTSTEDTSLLGLLKTNAPTLLNGL 283


>gi|260102147|ref|ZP_05752384.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260084037|gb|EEW68157.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
          Length = 494

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 87/264 (32%), Gaps = 29/264 (10%)

Query: 1   MYK----DFFVSILCLIILFF-----TSFS----TNASILGDIKKRGFLKCGINTGLVGF 47
           M K    + F++ + +I   F      + +     + S++  IK+   L  G +      
Sbjct: 1   MKKAKIVNLFLAFITIISTLFLFNQPVAAADKKVASDSVMKKIKQSKELVVGTSADYPPL 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                V  N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +   +G ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSQIYYKPSGEYFLINKRDQTKYKKIKDFAGQTVGAQTGSIQYQLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K    K       ++  +  A ++ +      +          ND     V      
Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTAKAYAKNDNSLMAVRSDLRE 230

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
            ++  A AI +G       V+ T 
Sbjct: 231 EQAGNAVAIAKGQPGLVKAVNKTI 254


>gi|163751502|ref|ZP_02158725.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shewanella benthica KT99]
 gi|161328623|gb|EDP99773.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shewanella benthica KT99]
          Length = 241

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 71/218 (32%), Gaps = 17/218 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      ++KGFD+D  R ++S        ++   +     
Sbjct: 20  KSDDVLVLGTNASFPPFEYVGGASGNEFKGFDIDIARQIASDSGK---TLKIQNMKFDSL 76

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
            +AL + +ID ++     T  R+    + F    Y   Q  I  K    I S++ L G  
Sbjct: 77  IMALNAGRIDFIAAGMTITPERQA--SVNFSTPYYEATQVVITKKSDTSIHSITDLRGKH 134

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ G+T +        A         F    E        + D      S   A  + 
Sbjct: 135 FAVQLGSTAD------IMAKKYTDKVTAFNSGFEAIMELNNGKVD-LVLFDSQPAANFMR 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P +  I     +      A+ + + +    ++ T 
Sbjct: 188 -KNP-DLKIQSLPFAAEFYGLAVAKKNPQLLQQINTTL 223


>gi|113971388|ref|YP_735181.1| extracellular solute-binding protein [Shewanella sp. MR-4]
 gi|113886072|gb|ABI40124.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           MR-4]
          Length = 244

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 17/228 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD++  + ++         ++   +     
Sbjct: 23  KSNDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
            +AL S +ID ++     T  R+    + F    Y   Q  +++K    I ++  +    
Sbjct: 80  IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNDTIHTLDDIKDKH 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ G+T +        +     +   F    E     +  + D    D          
Sbjct: 138 FAVQLGSTAD------MMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           N    +  ++           A+ +   E  N ++ T   +  + +  
Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQ 236


>gi|254298886|ref|ZP_04966336.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           406e]
 gi|157808906|gb|EDO86076.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           406e]
          Length = 260

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 22  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 78

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 79  WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 136

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 137 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 191

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 192 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 233


>gi|322385682|ref|ZP_08059326.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321270420|gb|EFX53336.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 724

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 67/210 (31%), Gaps = 16/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +     +T+A           +K   +T    F    ++  +KG D
Sbjct: 1   MKKKIIAFLLALFPILALGTTTHADT---------IKIVSDTAYAPFEFKDSDQTYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  I     ++ +   +A     A+Q+ Q D +      T  RE         
Sbjct: 52  VDIINKVA-EIKGWAYEMSFPGFDAAVN--AVQAGQADAIIAGMTKTAEREKV--FTMSD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   + S  QL G ++ V+ GT  +  L      +        F+  +
Sbjct: 107 TYYDTKVVIATTKANTVKSYDQLKGKTVGVKNGTAAQRFLEKIKDKYGF--TIKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D   +         
Sbjct: 165 LMYNSLTAGAVDAAMDDQPVIEYAISQGQD 194



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 71/237 (29%), Gaps = 25/237 (10%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               ++    F     +  + G D+D  +A++         ++           A+QS Q
Sbjct: 275 TIASDSSFAPFVFQNDSNQYTGIDMDLIKAIAED---QGFTLEISNPGFDAAINAVQSGQ 331

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+ +    F    Y       + +   ISS   L G ++ V+ GT +
Sbjct: 332 ADGMIAGMSVTEARKET--FNFSEPYYTANSILAVTESSTISSYEDLKGKTVGVKNGTAS 389

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +  L +    +  K     F     +  +  +    A   D   +        +      
Sbjct: 390 QTFLVENQSKYGYK--IKTFSDGSSMYDSLNSGSVAAIMDDEPVVKYAINQGKK------ 441

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           +   I  +P               V++   A    E + +    +  +  +    ++
Sbjct: 442 MKTPIEGTPSG------------EVAFAVKAGTNPELIEMFNNGLANLKANGKYQEI 486


>gi|221213818|ref|ZP_03586792.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Burkholderia multivorans CGD1]
 gi|221166607|gb|EED99079.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Burkholderia multivorans CGD1]
          Length = 302

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 13/223 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L+ GI      F      G  +GFDVD   A+ + +     K  ++         A
Sbjct: 66  ESTTLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPA 122

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           LQ+++ D+++   + T  R     + F P  Y      I  +   +      + G  + V
Sbjct: 123 LQARKFDVINSAMNITAKR--KQSIDFTPPIYVVPIVMIAKRGSPLRPEVASVRGKRVGV 180

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G++ E  L  ++    +    + ++  ++I A   A R DA   +        L    
Sbjct: 181 LQGSSQEDFLKAHWANAGVS--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQEGFLDKPA 238

Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
             ++ I+ + +             + +GD      V     A+
Sbjct: 239 GRDYQIVGEPLKDPATLGEGTGFGLRKGDKALQAKVVGALDAL 281


>gi|300313886|ref|YP_003777978.1| amino acid ABC transporter periplasmic protein [Herbaspirillum
           seropedicae SmR1]
 gi|300076671|gb|ADJ66070.1| ABC-type amino acid transport system, periplasmic component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 267

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 74/243 (30%), Gaps = 11/243 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           ++L  T+ +  A  L DIKK G ++    +    F          G DV+  R L+  + 
Sbjct: 17  LVLGLTAHAALADQLDDIKKAGKIRIATTSSTPLFGYSDEKLQLAGSDVEAARLLAQDLG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                I    +    R   LQ+ + DI+  +   T  R     + F              
Sbjct: 77  VQLDLIP---VANAARVPTLQANRADIVVGSLSITPERLKV--IDFSTPYAVISLIIGAP 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   I   + L+G  I V   T  +       K        + +E    +  +    + D
Sbjct: 132 KSMVIKDYADLNGKRIGVTRATPNDTLTTQNAK----GAEIMRYEDDATLITSMVTGQVD 187

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            ++   S L  ++      +  +          L  AI +        +       +   
Sbjct: 188 VFSSTPSNLQEMQKKAPGKNLEMKFEQKAFD--LGIAINKNQPRLKEWIDGWVKTNMKNG 245

Query: 253 ELG 255
           +L 
Sbjct: 246 KLN 248


>gi|168206718|ref|ZP_02632723.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens E str. JGS1987]
 gi|168211696|ref|ZP_02637321.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170661862|gb|EDT14545.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens E str. JGS1987]
 gi|170710342|gb|EDT22524.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 278

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 95/291 (32%), Gaps = 32/291 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K+ F     V+++  + L              +   +  IK+ G L  G++     + 
Sbjct: 1   MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+D  + ++  +  D   ++   +       ++++  ID+      
Sbjct: 61  FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163
            T   +    + F  I Y   QG +++K     I  +  L G  +  Q G+         
Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGSIQAEI---- 171

Query: 164 FKAHNMKYHPIVFERV-EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             A+ ++   +        +    +  + DA   ++    A   +       V    I +
Sbjct: 172 --ANGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKN 227

Query: 223 KS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
                A AI +G+ +  + V+ T   +    ++     +  ++       +
Sbjct: 228 SEGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278


>gi|313885015|ref|ZP_07818767.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619706|gb|EFR31143.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 483

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 102/300 (34%), Gaps = 16/300 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  +  +  L+I  F SFS         +++       ++    F    ++G   G D+
Sbjct: 12  KKMLWPLMFILMISNFVSFSAV-----KAQEKESYSIITSSDYAPFEFTDSSGKLVGIDI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++     +   I+Y  +       AL+S Q D +      T  R+      F   
Sbjct: 67  EILEAIAEDQGFE---IEYELMPFSSGLQALESNQADGMIAAMGITDERKE--SFDFSDP 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G  F +  K  I  +  L G  +  + G+       +    +      + FE    
Sbjct: 122 YFEVGSMFAVSTKSRIKDLKSLEGKKVATKIGSQGAQIANELKDRYGY--QIMTFEDSVN 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +    ++   DA   D   +     T     +  ++ + +   PL  A+ +G  +   ++
Sbjct: 180 MYQDIKSGNSDAVIEDAPVMA--YATKTGTVDLTLIGEEMDTLPLGFAVNKGKNQ--ELI 235

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
           +  +  +   +E G+    + + + D        F G    +     +GL K     I+ 
Sbjct: 236 NKFNQGLANIKESGLYDDILAKYTGDNVEKVETSFFGQLTQNFPALMVGLGKTLMATILS 295


>gi|170690104|ref|ZP_02881271.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170144539|gb|EDT12700.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 266

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 90/254 (35%), Gaps = 15/254 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +S+     +   +  +  +   + +    L+ GI      F    A G  +GFD
Sbjct: 1   MLRKLQLSLFVAAAVVAGAVGSVGTASAETQN--TLRFGIEAAYPPFESKTATGQLQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+ + +     K +++         ALQ+++ D+++   + T  R+    + F  
Sbjct: 59  VDVGNAVCAKM---AVKCEWVENAFDGLIPALQARKFDVINSAMNITAKRK--QTIDFTR 113

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  +  G+   V  + G  + V  G++ E  L  ++    +    + +   
Sbjct: 114 PIYIVPIVMVAKRGSGLMPDVKSMQGKRVGVLQGSSQEDFLKAHWANAGVS--VVSYADQ 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
           +++     A R DA   +   +    L      ++ I    +S            + +GD
Sbjct: 172 DQVYTDLVAGRLDAAVQETQTVEDGFLKKPAGHDYAIAGQPLSDPATLGEGTGFGLRKGD 231

Query: 235 TEWYNIVSWTHYAM 248
                 V     A+
Sbjct: 232 KALAKKVDAALEAL 245


>gi|170721981|ref|YP_001749669.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169759984|gb|ACA73300.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 250

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 76/218 (34%), Gaps = 9/218 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+         F  V A+    GFD+D   AL   +  +      +  + +    AL +
Sbjct: 23  TLRFATEGAYPPFNYVDADNQLHGFDIDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           ++ D +  +   T  R     +AF    Y       + K   IS       G ++  Q+ 
Sbjct: 80  RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKISDAQNTFEGYTVGAQSS 137

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T  +   D +          ++  ++E +A   A R D    D   L+     N +   
Sbjct: 138 STQAIYAEDVYAKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGQDCC 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            V+     +K+  A A+ + D      ++    A + A
Sbjct: 196 KVLGDVAGTKANAAIAVRKDDDALRQRLNTAL-AQIVA 232


>gi|88603303|ref|YP_503481.1| extracellular solute-binding protein [Methanospirillum hungatei
           JF-1]
 gi|88188765|gb|ABD41762.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 258

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 14/247 (5%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
              L  +      +I G   ++     GI+     F  + ANG   GFDVD  + ++  +
Sbjct: 14  AGFLITSCCGAAGNISGT--EKPVYIVGIDAYYPPFTYLDANGTPVGFDVDSVQWIADTM 71

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K+Q  P+   +   AL++ +ID++      T  R+      F    +   Q   +
Sbjct: 72  ---NFKVQITPVPWDDILTALETGEIDLIYSGFAITNERKEIC--DFTVPYWQVNQSVAV 126

Query: 132 HKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMK--YHPIVFERVEEIDAAYRA 188
           + +  +      SG   +  Q  T     +               + +E + E     +A
Sbjct: 127 NNQSSVKIDDFYSGLLRVGAQNNTRGVSWVELNLIGKGKMAPRSLVRYEGMNEAFDELQA 186

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            R DA  G  S +   K   D    H ++ +I +      A+  G+++    ++     +
Sbjct: 187 GRLDAIIGASSLI---KANLDSCDCH-VIGEIETDDHYGVAVKNGNSDLLETMNTGIDLL 242

Query: 249 VTAEELG 255
           + + E  
Sbjct: 243 MLSPEWE 249


>gi|186683156|ref|YP_001866352.1| polar amino acid ABC transporter inner membrane subunit [Nostoc
           punctiforme PCC 73102]
 gi|186465608|gb|ACC81409.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc
           punctiforme PCC 73102]
          Length = 501

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 68/239 (28%), Gaps = 21/239 (8%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             VS  CL+++     S+             L+         F   K  G+ +GF +D  
Sbjct: 14  VVVSFGCLLLVSCAVNSSAGKT---------LRVATEPAFPPFEFKKPGGELEGFSIDLM 64

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A++ A      K+ +  +       AL +K +D    +   T  R  +  ++F    + 
Sbjct: 65  NAIAVAA---KFKVDFQSMPFDGMIPALAAKTVDAAISSITITEERAKT--ISFSRPYFK 119

Query: 125 DGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            G    +       +    L    I VQ GTT                    F+      
Sbjct: 120 AGLAIAIRADDQNITGFDSLKNKKIAVQIGTTGAAKAKSI-----PGVQLRSFDSAPVAL 174

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                   DA   D        +         I+  ++++     A  +       I +
Sbjct: 175 QELANGNVDAVINDAPVTL-YAINTGNIQGIKIVQQLLTEEFYGIATAKNSPNLVLINN 232


>gi|270261141|ref|ZP_06189414.1| hypothetical protein SOD_a03660 [Serratia odorifera 4Rx13]
 gi|270044625|gb|EFA17716.1| hypothetical protein SOD_a03660 [Serratia odorifera 4Rx13]
          Length = 244

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 77/226 (34%), Gaps = 25/226 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++   L  + F + + +            ++   +     F  + A+    GFD
Sbjct: 1   MKK-LLLAATVLAGIAFNAGAAD-----------TIRFAASATYPPFESLDASNKIVGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          AL+ K+ D +    D T  R   +   F  
Sbjct: 49  IDLANALCKQM---KAECTFTNQAFDSLIAALKFKKYDAVISGMDITPERSKQVA--FTQ 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS++ L G  + ++ GTT +  + D         + + ++  +
Sbjct: 104 PYYANSAIVIAEKG-KFSSLADLKGKKVGMENGTTHQKYMQDKHPE----INTVSYDSYQ 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                 +  R D   GD + +           +   + + ++ +  
Sbjct: 159 NAILELKNGRIDGVFGDTAVVNEW---LKNNPQLAPVGEHVTDAQY 201


>gi|160941547|ref|ZP_02088879.1| hypothetical protein CLOBOL_06445 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435512|gb|EDP13279.1| hypothetical protein CLOBOL_06445 [Clostridium bolteae ATCC
           BAA-613]
          Length = 307

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 64/230 (27%), Gaps = 13/230 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             + S   +    I + G LK G       F     N +  G+DV+  RA+   +     
Sbjct: 58  TAAASAEKTRYEKILESGVLKVGTEGTYKPFTYHDDNNELCGYDVEVARAIGEKMGVKTE 117

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
              +  +  +    +L +  +D++      T  R+      F     +     I      
Sbjct: 118 ---FSEITWEGLLTSLDTGTVDLVLNQVGVTDERKE--KYDFSDPYLYSYIALITKTDNN 172

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             +    +         ++    +A+              +   +      A R D    
Sbjct: 173 DITDWDSANGKKTSLNVSSNYALIAE-----KYNMDITASDTFSKDIELLLAGRTDCVIN 227

Query: 197 DISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +  A           P +   + +      +A  I +G+ +    V+   
Sbjct: 228 NTIAFNDFLTQKPDTPIKIAAVQEQADT--VAVPIPKGNDDLVEAVNKAI 275


>gi|53720225|ref|YP_109211.1| ABC transporter substrate binding component [Burkholderia
           pseudomallei K96243]
 gi|76809070|ref|YP_334464.1| ABC transporter substrate binding component [Burkholderia
           pseudomallei 1710b]
 gi|167720785|ref|ZP_02404021.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           DM98]
 gi|167739769|ref|ZP_02412543.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           14]
 gi|167816989|ref|ZP_02448669.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           91]
 gi|167846891|ref|ZP_02472399.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           B7210]
 gi|167895468|ref|ZP_02482870.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           7894]
 gi|167903852|ref|ZP_02491057.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|167912119|ref|ZP_02499210.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           112]
 gi|167920092|ref|ZP_02507183.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           BCC215]
 gi|254180993|ref|ZP_04887591.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           1655]
 gi|254196093|ref|ZP_04902518.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           S13]
 gi|52210639|emb|CAH36623.1| ABC transporter, substrate binding component [Burkholderia
           pseudomallei K96243]
 gi|76578523|gb|ABA47998.1| ABC transporter, substrate binding component [Burkholderia
           pseudomallei 1710b]
 gi|169652837|gb|EDS85530.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           S13]
 gi|184211532|gb|EDU08575.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei
           1655]
          Length = 266

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 28  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 84

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 85  WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 142

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 143 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 197

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 198 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 239


>gi|254473366|ref|ZP_05086763.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
 gi|211957482|gb|EEA92685.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
          Length = 258

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 81/249 (32%), Gaps = 20/249 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F  +    ++ FT+ S   +   +I K   L+         F    ++G   GFDV+   
Sbjct: 3   FARMALATLMSFTAASALQA--DEITK---LRVATEGAYPPFNFTGSDGVLTGFDVEIGN 57

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL + +  +    ++           L + + D +  +   T  R     ++F    Y  
Sbjct: 58  ALCAEMKVE---CEWGTQEWDGMIPGLVAGKYDAIIASMSITEER--LERISFSRSYYNT 112

Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                + K   ++  S   L G  I  Q GTT  +   + +          ++   EE  
Sbjct: 113 PSTIAVPKDSPVTEISPEALDGLLIGAQGGTTHSVVAEEVYA----DADVALYPTSEEYK 168

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS----PLAPAIIQGDTEWYN 239
                 R DA   D+  L +   +       +I    I        +   + +G  E  +
Sbjct: 169 LDIENGRLDAVIDDLGVLQSWVDSEAGSCCKIIGSLPIQPELHGQGIGVGVRKGQEELAD 228

Query: 240 IVSWTHYAM 248
             S    A+
Sbjct: 229 RFSQAILAI 237


>gi|92115413|ref|YP_575341.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91798503|gb|ABE60642.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 254

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 20/230 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
             ++   + +  T+ +     L             +   V F  +   +G+  GFD+D  
Sbjct: 8   LSALALAMGIGGTALAQETPTLA---------VATDPSFVPFEMMDEESGEMVGFDIDII 58

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     +   +    ++      A+Q+  +DI       T  R  S  + F    Y 
Sbjct: 59  NTIADRAGFE---VDLNTMDFNGIIPAVQTGNVDIAIAGITITDER--SEIVDFSDPYYD 113

Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            G   ++      +  +  L G  I  + G+T+   L +             +    ++ 
Sbjct: 114 SGLRILVPSSNDDVEEIDDLEGMRIGTKIGSTSYDYLQE---ELGEDAEITPYPGSADMY 170

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            A      DA   D                  ++  +        A ++G
Sbjct: 171 MALMGGSVDAVFYDAP-NVGYFAQTKGEGRTKVVGPLYEGQQYGIAFVKG 219


>gi|283832469|ref|ZP_06352210.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Citrobacter youngae ATCC 29220]
 gi|291072128|gb|EFE10237.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Citrobacter youngae ATCC 29220]
          Length = 243

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 16/218 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G++     F  + A+    GFD+D   AL   +    ++  +          AL+ 
Sbjct: 22  KISFGVSATYPPFESLDASNKIVGFDIDLATALCKQM---QAECTFTNHAFDSLIPALKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R   +   F     +     ++ KK    + + L G  I ++ GT
Sbjct: 79  KKYDAVISGMDITPERSKQVA--FTQPY-YANSALVIAKKDTYKTFADLKGKRIGMENGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L D           + ++  +      +  R D   GD + +         P   
Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLG 189

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248
                +         L  A+   +      ++    A+
Sbjct: 190 AATDKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAI 227


>gi|254252780|ref|ZP_04946098.1| extracellular solute-binding protein [Burkholderia dolosa AUO158]
 gi|124895389|gb|EAY69269.1| extracellular solute-binding protein [Burkholderia dolosa AUO158]
          Length = 321

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 87  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 143

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G + +   L G  + V  
Sbjct: 144 ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTAQSLKGKRVGVLQ 201

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     L+  +  
Sbjct: 202 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 259

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S + +        + + D      +     
Sbjct: 260 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 298


>gi|226355644|ref|YP_002785384.1| ABC transporter periplasmic protein [Deinococcus deserti VCD115]
 gi|226317634|gb|ACO45630.1| putative ABC transporter, periplasmic component [Deinococcus
           deserti VCD115]
          Length = 251

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 14/226 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S  A    +IK+ G +K         F  +K      GF+VD  + L++ +     K+Q
Sbjct: 16  GSAEARTWEEIKRSGTIKIATEGAFPPFNMIKGK-QLTGFEVDLAKELATQLG---LKVQ 71

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++        + L   + D +  +   T  R     + F    Y  G   +     G  +
Sbjct: 72  WVTQPFDNLLIGLNQDRYDFVIASHGITPERAK--AVNFANPHYCTGGAIVTR-PGGPMT 128

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G  + VQ GTT    +               F +  +  AA  A R DA+ GD  
Sbjct: 129 AAALKGKKVAVQVGTTYLENVRKVPG----VGDVKTFPKDTDAQAALMAGRVDAWVGDKF 184

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               L              D++ K  +A A+ +G++     ++   
Sbjct: 185 TGIDLVKAQKGKVIQ---GDMLFKESIAMAVKKGNSGLLKELNAAL 227


>gi|161869733|ref|YP_001598900.1| amino acid permease substrate-binding protein [Neisseria
           meningitidis 053442]
 gi|161595286|gb|ABX72946.1| amino acid permease substrate-binding protein [Neisseria
           meningitidis 053442]
          Length = 275

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 64/225 (28%), Gaps = 25/225 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFST---------------NASILGDIKKRGFLKCGINTGLV 45
           M K F +  +  ++L                        S++  I  +G +  G      
Sbjct: 1   MLKKFVLGGIAALVLAACGGEGGSASSSAPAQSAGASGDSLIERINNKGTVTVGTEGTYA 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F     +G   G+DV+  RA++  +      +++           L++ + D+++    
Sbjct: 61  PFTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVG 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T   E            + G   +      I S+  + G        +          K
Sbjct: 118 LT-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------K 170

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           A       +  + + +        R DA   D  A+      N  
Sbjct: 171 AKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|242279377|ref|YP_002991506.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242122271|gb|ACS79967.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 291

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 35/271 (12%)

Query: 1   MY--KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M   ++  VS+   I+    +F                 G I +R  L  GI+     + 
Sbjct: 1   MKLWRNLSVSVAVAILAISLAFPALADDIGRDYSKGDTFGKILQRKSLNVGISI-FEPWV 59

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               NG++ GF++D  + L+S +     ++ ++  +       L + + DI+    + T 
Sbjct: 60  MKDQNGEYIGFEIDVAKRLASDMG---VQVNFVETDWDTIIPDLIANKFDIIICGMNMTP 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE----------- 157
            R   L + F     F+    + +K      +++    +  V     +            
Sbjct: 117 ER--ILKVNFSDPYEFNSMSIVANKDVKTGKMTRADYNNANVGLPHLSALEDFNSPKIRI 174

Query: 158 -----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
                 T  D  K +  K   +VFE       A                  L     +  
Sbjct: 175 GVRRGTTAEDAVKNYTPKAKAVVFENEATSIQALLNGEVSCLMLSQPLPKMLAEKYPKKL 234

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            ++ LP   ++ P    + +GD ++   ++ 
Sbjct: 235 -YLALPSGFAREPSGFVVRKGDHDFLTYLNN 264


>gi|159029917|emb|CAO90296.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 503

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 79/255 (30%), Gaps = 19/255 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F  +  ++ +  T     +    +       +         F   +  G   GFD+D
Sbjct: 12  RVIFALLGLVLAIGLTVIPAFSQTPPN-----PFRVATEATFPPFEFQQG-GQLTGFDID 65

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RA+          I +  L       ALQ++ ++        T  R  +  ++F    
Sbjct: 66  LMRAIGKEA---DLNIDFRNLPFDGIIPALQARTVEAAISGMTITAER--AQAISFSRPY 120

Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +  G    +    + I +   L G  I VQ GTT  L       A         F+    
Sbjct: 121 FRAGLAIAVREDNQTIRNFEDLKGKRIAVQIGTTGALEATKIPGA-----VVSQFDSAAL 175

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R +A   D        +         ++ +++++     A+ +    +  ++
Sbjct: 176 ALQELINGRVEAVVNDKPVTL-YAIKQAGLRRVKVVGELLTEEFYGIALPKNSP-YLQLI 233

Query: 242 SWTHYAMVTAEELGI 256
           +     ++ + +  +
Sbjct: 234 NDALGRVIESGQYDV 248


>gi|15599060|ref|NP_252554.1| amino acid binding protein [Pseudomonas aeruginosa PAO1]
 gi|9950043|gb|AAG07252.1|AE004803_8 probable amino acid binding protein [Pseudomonas aeruginosa PAO1]
          Length = 263

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ GI      F+   A G+  GFD D   AL + +     K Q++       
Sbjct: 24  AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             +L+ ++ID    +   T  R     + F    YF     +M +  +   S SQL+G  
Sbjct: 81  IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G T +   +            + +   +EI     A R DA   D   L    L 
Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196

Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             R   +                   A+ +GD E    ++    A+
Sbjct: 197 TPRGKGYAFAGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242


>gi|322832889|ref|YP_004212916.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321168090|gb|ADW73789.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 273

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K     I   ++L       +A+ L   K++  +K  +              G+  G 
Sbjct: 1   MKKTLLSLITAGVLLNGAVSVASAAEL---KQKDEIKVAMMPNYPPLEFKDPATGNLTGM 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D    L   +     KI +  +  ++   A+ + ++D++      T  R       F 
Sbjct: 58  DYDLGMELGKRL---NRKISWQEIGFEQMVNAVATHRVDMILSGMTDTKPR--QDIATFV 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174
                  Q +     K I+++  L G  +     TT    +A + +A+           I
Sbjct: 113 DYYNSGPQFYTTVAHKEINTMLDLCGKKVGTSRRTTFPAEIAAWSEANCVPAGKPAIVVI 172

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   +     R  R +        L  +         +  L    +       I + D
Sbjct: 173 GAEGTADARTQLRQGRIEGVVQGSETLPYIMNLEKD--TYKPLGKAFAYQVTGMGISKDD 230

Query: 235 TEWYNIVSWTHYAMVT 250
               + V      M+ 
Sbjct: 231 QPLIDAVKGALTDMIA 246


>gi|146312501|ref|YP_001177575.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter sp. 638]
 gi|145319377|gb|ABP61524.1| L-arginine-binding protein / L-lysine-binding protein /
           L-ornithine-binding protein [Enterobacter sp. 638]
          Length = 260

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L        ++ G +     F+   A GD+ GFD
Sbjct: 1   MKKTVLALSL---LVGLSAAASSYAALPQ-----TVRIGTDATYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSE 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I  K   I  ++  L G  + V  G+T E      ++   +    + ++  
Sbjct: 108 KLYAADSRLIAAKGSPIQPTIESLKGKHVGVLQGSTQEGYANADWREKGVD--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I +   A R DA   D  A     L      E       +             + + D
Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKEFAFAGPSVKDKKYFGDGTGIGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E                EL       ++++K   + +V
Sbjct: 226 AELKAAFDKAFN------ELRKDGT-YDKLAKKYFDFNV 257


>gi|296103995|ref|YP_003614141.1| histidine/lysine/arginine/ornithine transport system
           substrate-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058454|gb|ADF63192.1| histidine/lysine/arginine/ornithine transport system
           substrate-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    + G+  GFD+D    L   I    ++  Y+         +L++
Sbjct: 27  KIRIGTDPTYAPFESKNSKGELVGFDIDLANELCKRI---KAQCTYVENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID++  +   T  R     +AF    Y      ++ K   I  ++  L G  + V  G
Sbjct: 84  KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKSSDIQPTLESLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  E I A   A R DA   D  A     L      +
Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKTPVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      I    L        + + D E    ++   +A + A+         ++++K  
Sbjct: 200 YKFGGPSIKDVKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYDKLAKKY 252

Query: 269 TNPDV 273
            + +V
Sbjct: 253 FDFNV 257


>gi|238897602|ref|YP_002923281.1| high-affinity glutamine transport protein (ABC superfamily,
           peri_bind) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465359|gb|ACQ67133.1| high-affinity glutamine transport protein (ABC superfamily,
           peri_bind) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 247

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 82/247 (33%), Gaps = 22/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + ++    LF  + S+             L   I+T  V F   + +  + GFD
Sbjct: 1   MKSLIKIILITFAFLFTLNVSSAEKS---------LIVAIDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +  +       P++      ALQ+K +D+       T  R+    + F  
Sbjct: 51  IDIWDAIAKELKLNY---TLKPMDFSGIVPALQTKNVDLALAGITITEQRKK--AIDFSD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I +   L    + V++GT +     DY KA+        F  +
Sbjct: 106 GYYKSGLLVMVKSNNDKIKNAEDLKDKIVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T         + +++       A  +G +    
Sbjct: 162 DNAYLELGTGRADAVLHDAPNILFFIKTAGDKK-FKAVGEMLESLQYGIAFPKG-SVLRE 219

Query: 240 IVSWTHY 246
            V+    
Sbjct: 220 EVNLALN 226


>gi|229916003|ref|YP_002884649.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
 gi|229467432|gb|ACQ69204.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
          Length = 282

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 79/260 (30%), Gaps = 19/260 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEV-KA 52
           M +        L +    +   + S          +I++ G L  G    L   +   + 
Sbjct: 1   MKRTTKGLAATLFLAIPLAACGDDSTDQADTTRWEEIQEEGTLTVGTAGTLYPASFREEE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDV+  + ++  +     +I++  +       ++Q+ QID+ + +   T   + 
Sbjct: 61  SDTLTGFDVELMKEIAKRL---DLEIEFKEMAFDNMLTSVQNGQIDVAANDISVTE--DR 115

Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
               AF     +     I+ K    GI S+  L G     +A T       D  + +  +
Sbjct: 116 KEKFAFSKPYKYTYGTAIVRKSDLSGIESLEDLKGKKAAGEATTVFM----DVAREYGAE 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                    ++        R D    D                 +      +   +A  +
Sbjct: 172 EVIYDNATNDQYLRDVSTGRTDVILNDYYLQTLALAFFPEFDITIHPDIAYNPQEVAFLM 231

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            + + E    +      M+ 
Sbjct: 232 DKENDELQENIDRVLDEMLE 251


>gi|170703023|ref|ZP_02893852.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170132064|gb|EDT00563.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 264

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 13/221 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KVKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G+  +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211
           GT  E      +         + ++  +   A  ++ R DA +    +            
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202

Query: 212 SEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
                   +     L       + + D      +      +
Sbjct: 203 GFGFAGGTVADAEILGSGVGFGLRKNDAALKTALDQALKGL 243


>gi|167034986|ref|YP_001670217.1| cationic amino acid ABC transporter periplasmic binding protein
           [Pseudomonas putida GB-1]
 gi|166861474|gb|ABY99881.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida GB-1]
          Length = 261

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +    S +              LK GI      FA  + +G   GFD
Sbjct: 1   MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +    +K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     +S     L G  I VQ G+  +    +   A       + +   
Sbjct: 106 RYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            EI     A R D    D + L    L  D       +    + +         A+ +GD
Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223

Query: 235 TEWYNIVSWTHYAM 248
               + ++    A+
Sbjct: 224 KANVDRINAAIDAI 237


>gi|324990732|gb|EGC22668.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK353]
          Length = 287

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLTAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +       ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|28900675|ref|NP_800330.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|260365549|ref|ZP_05778086.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus K5030]
 gi|260877613|ref|ZP_05889968.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AN-5034]
 gi|260895966|ref|ZP_05904462.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus Peru-466]
 gi|260901647|ref|ZP_05910042.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AQ4037]
 gi|28809055|dbj|BAC62163.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|308085208|gb|EFO34903.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus Peru-466]
 gi|308090946|gb|EFO40641.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AN-5034]
 gi|308108882|gb|EFO46422.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AQ4037]
 gi|308114387|gb|EFO51927.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus K5030]
          Length = 273

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 20/252 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M   K    ++L L I   T     A+    +  IK+RG L+ G++T  V +A     G+
Sbjct: 1   MKLFKATITALLGLAIAMPTLAKEEAATTPNIDQIKERGTLRVGMST-FVPWAMRNKQGE 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF++D  + L+        K++++P        AL +K+ D++      T  R  S  
Sbjct: 60  LIGFEIDVAKRLAEDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKS 114

Query: 116 LAFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
           + F       G     +K+        S        I  + G  T     + F       
Sbjct: 115 VLFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK--- 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F+   +           A            + +      +   + +SK   A A+ 
Sbjct: 172 -ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVR 229

Query: 232 QGDTEWYNIVSW 243
            G+ +     + 
Sbjct: 230 LGEEDKKAFFNK 241


>gi|325955845|ref|YP_004286455.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus acidophilus 30SC]
 gi|325332410|gb|ADZ06318.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus acidophilus 30SC]
 gi|327182680|gb|AEA31127.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1118]
          Length = 494

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 86/265 (32%), Gaps = 29/265 (10%)

Query: 1   MYK----DFFVSILCLIILFFT----SFST-----NASILGDIKKRGFLKCGINTGLVGF 47
           M K      F++ + LI   F     +F+      N +++  IK+   L  G +      
Sbjct: 1   MKKAKIIHLFLAFITLISTLFLFNQPTFAATKKVENGTVMKKIKQSKELVVGTSADYPPL 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                V  N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +   +  ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQSKYRKIKDFADQTVGAQTGSIQYQLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K            ++  +  A ++ +      +          ND     V      
Sbjct: 176 SQMKK----SKVKGLGKINNLVLALKSGKMSGVVMEE-LTAKAYAQNDNSLMAVRSDLRE 230

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++  A A+ +G  +    V+ T  
Sbjct: 231 QQAGNAVAVAKGQGDLVKAVNKTIN 255


>gi|227510040|ref|ZP_03940089.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227512970|ref|ZP_03943019.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227083727|gb|EEI19039.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227190419|gb|EEI70486.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 716

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +     F        + G D+D  RA+++       K++  PL       A++
Sbjct: 264 KTFTIGTDVTFPPFEFANKQNKYVGIDMDLVRAIANE---QGFKVKIKPLGFNAAVQAVE 320

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S QID +      T  R+      F    +  G    ++KK  + S+SQL G  + V+ G
Sbjct: 321 SGQIDGVIAGMSITNARKA--QFNFSNPYFTSGVVMAVNKKSKVKSLSQLRGKKVAVKTG 378

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T          K +        F+    +          A   D   +   +    + ++
Sbjct: 379 TAGADYANSIKKKYGF--TVTTFDDSNNMYQDVTTGNSAACFEDHPVM---QYAIKQGTK 433

Query: 214 HVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG------ITQKNINQVSK 266
             I+      +P   A+ +  +       +     +  +          +   +    +K
Sbjct: 434 LKIVTKPAESAPYGFAVKKGHNKALLAAFNNGLKDLKASGTYDDIKAKYLGSSDALTTTK 493

Query: 267 DTTNPDVQRFLGIDKSSNIGEAL-GL 291
            T + + + FLG+ K  N G  L GL
Sbjct: 494 STGSSEDRTFLGLIK-QNQGALLSGL 518



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 19/234 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +     +  L  L F++ +  A              G +     F        + G D+D
Sbjct: 12  RWVVFLMTFLTCLIFSNIAAQAKTYQ---------IGTDVTYPPFEFANKQNKYVGIDID 62

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++     +  K+   P+       ++QS Q D +      T  R+      F    
Sbjct: 63  IMNAIAKE---EGFKVHIKPVGFNAAVQSVQSGQEDGVIAGMTITPDRQA--KFDFGTPY 117

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y  G    + K   I++  QL G  + ++ GT          K +  K   + F+  + +
Sbjct: 118 YKTGVVMAVAKSSHITNFKQLKGKRVALKTGTAAADYANSIKKKYGFKT--VTFDDSDNM 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                     A   D   +   +    +  +  I+    +      A+ +G  +
Sbjct: 176 YQDVTTGNSVACFEDQPVM---QYGIKQGLKLKIVTKPANTGWYGFAVKKGTHK 226


>gi|54023857|ref|YP_118099.1| putative transporter substrate-binding protein [Nocardia farcinica
           IFM 10152]
 gi|54015365|dbj|BAD56735.1| putative transporter substrate-binding protein [Nocardia farcinica
           IFM 10152]
          Length = 305

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 76/243 (31%), Gaps = 16/243 (6%)

Query: 24  ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A  L   IK+ G L  G+N          A+G   GFDVD   A+++ +        Y+ 
Sbjct: 55  ADRLPDKIKQSGKLVVGVNVPYQPNEYRDADGKIVGFDVDLMDAVTAVLGIQAE---YVE 111

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
              ++   A+Q+   D+       T  +E    + F    +  G  +     K I   + 
Sbjct: 112 SAFEKIIPAIQAGTYDVGMS--SITDSKEREQQVDFT-TYFNAGIQWAQQTGKPI-DPAN 167

Query: 143 LSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G  + VQA T           A+             F+       A    + DA + D
Sbjct: 168 ACGKRVAVQATTVEHTEEVPAKSAECVAQGKPPIDIKAFDEQSAATNALVQGQVDAMSAD 227

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                     +    E      +   +P   A+ +G      ++      ++   +    
Sbjct: 228 SPVTAYAIKQSGGKIE--PAGPVFDSAPYGWAVQKGSP-LAAVLQAAVNHLIRNGQYKQI 284

Query: 258 QKN 260
            +N
Sbjct: 285 TEN 287


>gi|222823602|ref|YP_002575176.1| amino acid ABC transporter, permease/substrate-binding lipoprotein
           [Campylobacter lari RM2100]
 gi|222538824|gb|ACM63925.1| amino acid ABC transporter, permease/substrate-binding lipoprotein
           [Campylobacter lari RM2100]
          Length = 252

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 13/220 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  +V +    +L   + S++ +           K GI      F  V  +    GFD
Sbjct: 1   MKKILYVVLALFGMLVLGACSSDKNQ-ASASSEKVYKVGIAANYPPFDFV-KDAKITGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +  K++++ ++      AL++ +ID+++     T  R     + F  
Sbjct: 59  VDLLEEIAKR---ENLKLEWVNMSFDGLIPALKAGKIDMIASAMSSTPQR--LTSMDFSD 113

Query: 121 ITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     ++       IS    L G  I VQ GT     + +           +  E +
Sbjct: 114 TYFNTKNLYLKLKTDSSISDKKSLEGKKIGVQLGT-----IQESAAKTIPNTQVVASEEM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                A +A + DA   D         TN+     +   D
Sbjct: 169 LAAILALKAGKVDAVLTDKDIGKGYLKTNEELEAFLEEND 208


>gi|209521740|ref|ZP_03270426.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
 gi|209497833|gb|EDZ98002.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
          Length = 260

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    A+G   GFD+D    +   +    +K  ++  +      
Sbjct: 23  KDWSTIRFGVDASYPPFESKGADGKLVGFDIDLGNEICKRVG---AKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  +  GI  +   L G ++ 
Sbjct: 80  ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKQGSGILPTAESLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWEPAG--AKVVPYQNQDQVYADLISGRLDAALQDAVQADQGFLKTP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R    V +   ++   +        + + DT+    V      M+
Sbjct: 196 RGKGFVFVGQDLNDPKILGSGAGIGMRKEDTDLKAKVDKAIADMI 240


>gi|313472476|ref|ZP_07812968.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lactobacillus jensenii 1153]
 gi|313449162|gb|EEQ68903.2| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lactobacillus jensenii 1153]
          Length = 251

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 15/244 (6%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +  I +   + S   S   ++  +G L  G+      +A    NG   GF+VD  +A++ 
Sbjct: 1   MIAISVGLVACSNQKSSSSEVLHKGTLTVGLEGTYAPYAYR-ENGKLTGFEVDLAKAVAK 59

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
                   I+++P         L +K+ DI+  +   T  R+     AF     +     
Sbjct: 60  KAGYK---IKFVPTKWDSLIAGLGAKKFDIVINDIAMTPERKK--AYAFSTPYIYSKSAL 114

Query: 130 IMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           IM K    I S   + G  I    GT     +  +   +      +            R 
Sbjct: 115 IMKKTNNTIKSAKDIKGLKIAAATGTANADNVKKFGGQN------VSSTDFSTAMELIRQ 168

Query: 189 HRCDAYTGDISAL-YALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHY 246
           +R  A      A  Y  K  +    +++ +P    +   +   + +G++     ++    
Sbjct: 169 NRVVAAMNSKEAFLYYQKSQHVTDLKYMEVPSSQIAAQEIGIMMAKGNSSLQKKINKALN 228

Query: 247 AMVT 250
            +  
Sbjct: 229 TLKE 232


>gi|49082954|gb|AAT50877.1| PA3865 [synthetic construct]
          Length = 264

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ GI      F+   A G+  GFD D   AL + +     K Q++       
Sbjct: 24  AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             +L+ ++ID    +   T  R     + F    YF     +M +  +   S SQL+G  
Sbjct: 81  IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G T +   +            + +   +EI     A R DA   D   L    L 
Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196

Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             R   +                   A+ +GD E    ++    A+
Sbjct: 197 TPRGKGYAFAGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242


>gi|330889204|gb|EGH21865.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. mori str. 301020]
          Length = 258

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 77/246 (31%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M     I  S+++L G  I +Q G+  E    +             +   
Sbjct: 106 KYYNSPARLVMKDGTVISDSLAELKGKKIGMQRGSIHERFAREVLAPKG--VEVTPYGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +          P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDAGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222

Query: 234 DTEWYN 239
           D     
Sbjct: 223 DKANLE 228


>gi|167749244|ref|ZP_02421371.1| hypothetical protein EUBSIR_00195 [Eubacterium siraeum DSM 15702]
 gi|167657773|gb|EDS01903.1| hypothetical protein EUBSIR_00195 [Eubacterium siraeum DSM 15702]
          Length = 258

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 20/251 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K     IL             ++        G L      G   +  +  N +  G 
Sbjct: 1   MKIKRIIAGILVAATCGLAMAGCQSNT-----TGGKLIMATEPGFAPYEYMSGN-NVVGI 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++  +     +++   ++     LA+Q  ++D  +     T  R     + F 
Sbjct: 55  DVDIANEVAKELG---MELEIQSMDFDGALLAVQQGKVDFAAAGISVTPER--QEAMDFS 109

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  Q  ++ K    + S   L G +      +T    +AD +   ++K  P  + +
Sbjct: 110 IEYAKSKQVIVVLKGANRVKSADDLGGDTKIAVQMST----VADTYVTDDLKKEPSRYTK 165

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     ++ + D    D       K          IL   +     A A  +G+TE  
Sbjct: 166 YVQAAEDLKSDKVDCIVMDE---LPAKEMVKGNDNLEILDGEVFTDKYAFAFKKGNTELE 222

Query: 239 NIVSWTHYAMV 249
             V+     ++
Sbjct: 223 EKVNKVLQKLI 233


>gi|163758475|ref|ZP_02165563.1| putative periplasmic binding abc transporter protein [Hoeflea
           phototrophica DFL-43]
 gi|162284764|gb|EDQ35047.1| putative periplasmic binding abc transporter protein [Hoeflea
           phototrophica DFL-43]
          Length = 256

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFC 64
            ++ +    +   + + +A           ++ G+       F E  A+G+W G++++F 
Sbjct: 5   IITAIAAFGMTLAAQAASAET---------VRVGVAAEPYPPFTEPDASGNWTGWEIEFM 55

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A+ +    D       P+       AL S +ID +  +   T  R     + F    Y 
Sbjct: 56  NAVCAEAKLD---CVVTPVAWDGIIPALTSNKIDAIIGSMSITEER--MKTIDFSDKYYN 110

Query: 125 DGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                   K  GI    + L+   I VQ  T  +  +  +F           ++  +E +
Sbjct: 111 TPSVIATAKDSGITPDAAGLADKIIGVQVSTIHQDYVTTHFGDA--VAEIKEYQTQDEAN 168

Query: 184 AAYRAHRCDAYTGD 197
               A R DA   D
Sbjct: 169 QDLAAGRVDAIMAD 182


>gi|111017250|ref|YP_700222.1| ABC amino acid transporter, periplasmic substrate binding protein
           [Rhodococcus jostii RHA1]
 gi|110816780|gb|ABG92064.1| ABC amino acid transporter, periplasmic substrate binding protein
           [Rhodococcus jostii RHA1]
          Length = 329

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 11/238 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
                        +    LGDI+ RG +   ++     F+      G   GF VD  R +
Sbjct: 69  ACAAPASLRPGTPSFGGTLGDIRARGTVVVAVDQNTNLFSFRDPTTGTLTGFGVDLAREV 128

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  DP+K+++ PL   +    L  +  D++ R             L F  +     +
Sbjct: 129 ARDLLGDPTKVEFRPLGTDDGAEMLADRDADMVVRPVALPCQ--GLQDLTFSTVYLEASR 186

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             ++    GIS  + L+   +C      +   L+            +     ++   A +
Sbjct: 187 RLVVRDGSGISGPADLARRRVCTHHDPASMSALSRIAPKA----TILAVPDWDDCLMAIQ 242

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + DA  G       L   +       I+      +  A  +  G+ +    V+ T 
Sbjct: 243 QRQADAVAGAAFL-AGLVAQDPN---LEIVGPETDSAQYAIGLAPGNDDLVRFVNGTL 296


>gi|257057821|ref|YP_003135653.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Saccharomonospora viridis DSM
           43017]
 gi|256587693|gb|ACU98826.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Saccharomonospora viridis DSM
           43017]
          Length = 272

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 21/260 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M +     +++L    L  T+ S          + A     +   G L    +     F 
Sbjct: 1   MARRLTRALTLLPAFALAITATSCAEEVNTGGDSEAGGEITLVNEGKLTTCTHLPYKPFQ 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               NG   GFDVD    ++  +  +   +      + E   AL + Q D+ +     T 
Sbjct: 61  FT-ENGKTVGFDVDLVDLVAEELGVEQE-VFDTSFESIESGAALDTGQCDLAAAGMSITD 118

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           +R+  +   F    Y   Q  ++ K   IS +S L G  + VQ GTT E    ++ +   
Sbjct: 119 VRKKVM--DFSEGYYDANQALLVKKGSDISDLSDLKGKVLGVQLGTTGEKYAEEHKEEFG 176

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  FE +  +  A +  +  A   D S  Y         S+  +  +  +      
Sbjct: 177 Y--TTRQFEDLALLQTAVKTGQVAAGINDNSVFYDY---VKNNSDVEVTAEFETGEEYGI 231

Query: 229 AIIQGDTEWYNIVSWTHYAM 248
           A+ +G+      ++    A 
Sbjct: 232 AVRKGNGALLAKINEVLDAA 251


>gi|260221299|emb|CBA29725.1| Histidine-binding periplasmic protein [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 235

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 78/219 (35%), Gaps = 14/219 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K  I+     F    A+G   GFDVD   AL   I     K +++          L +K
Sbjct: 1   MKVAIDPTYEPFTFKSADGQPTGFDVDIANALCEQI---KRKCEFVEQVWDSMIPGLNAK 57

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D++  +   T   +    + F    Y      ++ K    +  + + G  I V  G+T
Sbjct: 58  KYDVIISSMSITD--DRLKEVDFTDKYYNTPSRIVLKKGTKFTDAASIKGKKIGVLKGST 115

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E       K   +  +   +E  +++    ++ R D    D   +    L+    +++ 
Sbjct: 116 QEKYALGDLKPAGVIVN--SYEAQDQVYLDIKSGRLDGTVADYMEVTGGFLSKPEGAKY- 172

Query: 216 ILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAM 248
            L     K P         A+ +G+ +    ++    A+
Sbjct: 173 ELVGPDLKMPQYFGYGAGIALRKGEDKLKGELNEAIKAI 211


>gi|90409073|ref|ZP_01217198.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Psychromonas sp. CNPT3]
 gi|90309830|gb|EAS37990.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Psychromonas sp. CNPT3]
          Length = 263

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 86/254 (33%), Gaps = 20/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L+ LF  S +   +     K+   ++ G+      FA  +A+G   GFD
Sbjct: 1   MKKIHISLAHVLVALFVLSVNVVQA-----KEWKEIRVGVEGAYPPFAITEADGSVSGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K  Y+  +      AL +++ D +    D T  R     +AF  
Sbjct: 56  IDLTNALCEKM---NAKCTYIKQDWDGIIPALLARKFDAIIATMDITEAR--LKKVAFTD 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F+  K       +    G  I VQ  ++ +  ++D    +      + +   
Sbjct: 111 KYQHIPARFVALKGTLYEETNAFMSGKKIGVQRASSMDTYVSD----NYPDAKIMRYGSA 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234
            +     ++ R +    D +A+    L      +   +   ++           AI + D
Sbjct: 167 NDAYLDLKSGRLNYVLADSAAITDGLLGKKGGDKFNFVGPKLNDPKWFGEGAGIAIRKQD 226

Query: 235 TEWYNIVSWTHYAM 248
            +     +    A+
Sbjct: 227 KDLVEQFNRAIEAV 240


>gi|283953899|ref|ZP_06371428.1| CjaC [Campylobacter jejuni subsp. jejuni 414]
 gi|283794504|gb|EFC33244.1| CjaC [Campylobacter jejuni subsp. jejuni 414]
          Length = 251

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 74/237 (31%), Gaps = 16/237 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L+ LF  +   N S   +      LK G       F     N    GFD
Sbjct: 1   MKKISSIVLAALVGLFLGAC--NDSKNKESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++     T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWVETNFDGLISALKAGKIDMIASAMSATDER--RQNVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + S L G  I VQ GT     L +              + +
Sbjct: 113 PYYISKNLYLKLKNNDSLQTKSDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                A + ++ DA   D           + P       +      L+ A  +   +
Sbjct: 168 NIAVLALKNNKIDAIITDQDTAKGFLT--ENPELVSFYQETDGGEGLSFAFDKNKQK 222


>gi|238791256|ref|ZP_04634895.1| Amino acid-binding protein [Yersinia intermedia ATCC 29909]
 gi|238729389|gb|EEQ20904.1| Amino acid-binding protein [Yersinia intermedia ATCC 29909]
          Length = 262

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 83/251 (33%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K   +   CL  +     +                  G       F    +    +GF
Sbjct: 1   MFKRLMLVGTCLAAVLSAGSAMAVEPTY---------VVGSGGTYRPFEYENSQKQLEGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A+  A   +  +++ +    +  F  L S   DI+      T  R+    + F 
Sbjct: 52  DIDIIKAIGKA---EGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +   Q  ++ K   ++S++ L   ++ V   +T ++ ++D    +        F+  
Sbjct: 107 DPYFPAEQTIVVAKGSKVNSIAALKDLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNT 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +          A  GD+        T+   +  ++      +     A+ +G+ E   
Sbjct: 165 PLMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFELVSDTKFERQYFGIAVAKGNEELRT 224

Query: 240 IVSWTHYAMVT 250
            ++     ++ 
Sbjct: 225 KINSGLQKIIA 235


>gi|291556970|emb|CBL34087.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a]
          Length = 281

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 20/251 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K     IL             ++        G L      G   +  +  N +  G 
Sbjct: 24  MKIKRIIAGILVAATCGLAMAGCQSNT-----TGGKLIMATEPGFAPYEYMSGN-NVVGI 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++  +     +++   ++     LA+Q  ++D  +     T  R     + F 
Sbjct: 78  DVDIANEVAKELG---MELEIQSMDFDGALLAVQQGKVDFAAAGISVTPER--QEAMDFS 132

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  Q  ++ K    + S   L G +      +T    +AD +   ++K  P  + +
Sbjct: 133 IEYAKSKQVIVVLKGANRVKSADDLGGDTKIAVQMST----VADTYVTDDLKKEPSRYTK 188

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     ++ + D    D       K          IL   +     A A  +G+TE  
Sbjct: 189 YVQAAEDLKSDKVDCIVMDE---LPAKEMVKGNDNLEILDGEVFTDKYAFAFKKGNTELE 245

Query: 239 NIVSWTHYAMV 249
             V+     ++
Sbjct: 246 EKVNKVLQKLI 256


>gi|160899821|ref|YP_001565403.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160365405|gb|ABX37018.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 318

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 8/197 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
           F +++    +   +   +++    IK+ G L+ G       F+ +   +G  +GFD    
Sbjct: 52  FDALVAQGPVADAATIASSTWASKIKQTGTLRLGSTQTSNLFSLLNEKDGKIRGFDAGLA 111

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L+  I  D SK Q+  + +  R   L + Q D++      T  R     ++F    Y 
Sbjct: 112 QLLTRYILGDASKYQFAQVTSSTREQVLINNQADMVIATYSITPARAE--KISFAGPYYT 169

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              G ++      + S S L+G  +  QAG+T    LA +            F+  +E  
Sbjct: 170 SQAGVLVKASNKTVQSYSDLAGKKVATQAGSTGPAILAQHAPKA----VVQEFQTHQEAL 225

Query: 184 AAYRAHRCDAYTGDISA 200
            + R  R DAY  D + 
Sbjct: 226 DSLRQGRVDAYVTDYTL 242


>gi|15673741|ref|NP_267915.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|12724781|gb|AAK05857.1|AE006406_1 glutamine ABC transporter permease and substrate binding protein
           protein [Lactococcus lactis subsp. lactis Il1403]
 gi|326407245|gb|ADZ64316.1| glutamine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis CV56]
          Length = 714

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K FF   + L  +     + +      +K    +K   ++    F        W G D
Sbjct: 1   MKKLFFALAMMLATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++     +  K++            L++ Q+D +      T  R+ +    F  
Sbjct: 55  VDIMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGIIAGMTITDERKET--FDFSN 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   +S  S L G ++  + GT  +  L +  K +        +    
Sbjct: 110 PYYTSALTIATTKDSKLSDYSDLKGKAVGAKNGTAAQTWLQENQKKYGY--TIKTYSDGV 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            + AA  +        ++  +             + +       P          +   +
Sbjct: 168 HMFAALSSGNIAGAMDEVPVISYAMKQGQD----LAMNFPSISLPGGYGFAVMKGKNSTL 223

Query: 241 VSWTHYAMVT 250
           V   + A+  
Sbjct: 224 VDGFNKALAE 233



 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 9/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+       +     F     +  + G DVD   A++    +   K+++  +  +    +
Sbjct: 258 KKDVYTIASDNSFAPFEFQNDDKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS   D +      T  R+        P    +           I S   L G ++  +
Sbjct: 315 VQSGHADGMMSGMSITDARKQVFDYG-SPYYSSNLTIATSSTDDSIKSWKDLKGKTLGAK 373

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +   L  + K +        F     + ++      +A   D   +   K    + 
Sbjct: 374 NGTASFDYLNAHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQG 428

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            +       I       A+ +G       +     A + A
Sbjct: 429 QKFATPIKPIPDGQYGFAVKKGSNPELIEMFNNGLANLRA 468


>gi|327461742|gb|EGF08073.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1]
 gi|327489027|gb|EGF20822.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1058]
          Length = 287

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAVVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +       ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|323525640|ref|YP_004227793.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Burkholderia sp. CCGE1001]
 gi|323382642|gb|ADX54733.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1001]
          Length = 264

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 95/259 (36%), Gaps = 23/259 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  +++  DIK+   ++ G+      F     +G+ +GFD+D   A+ + +    +K  +
Sbjct: 20  AAGSAMAADIKE---VRFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KAKCVW 73

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-S 139
           +  +      ALQ+++ + ++ +   T  R     + F    Y      I  K  G+  +
Sbjct: 74  VENSFDGLIPALQARKFNAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLQPT 131

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G  + V  GT  E      +    +    + ++  ++I A   + R DA   D  
Sbjct: 132 PASLKGKHVGVLQGTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDASFQDAE 189

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           A     L   + +        +S   L        I +GD    + ++          EL
Sbjct: 190 AASKGFLKKPQGAGFEFAGPAVSDEKLLGAGVGFGIRRGDKALKDALNQALK------EL 243

Query: 255 GITQKNINQVSKDTTNPDV 273
                 I++ +    +  V
Sbjct: 244 KADG-TIDRFAAKYFDVKV 261


>gi|119493144|ref|ZP_01624050.1| hypothetical protein L8106_08761 [Lyngbya sp. PCC 8106]
 gi|119452798|gb|EAW33974.1| hypothetical protein L8106_08761 [Lyngbya sp. PCC 8106]
          Length = 302

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 113/314 (35%), Gaps = 27/314 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+  F ++ L +++      +  A  +     + G +  G  + ++ ++ +    +  G+
Sbjct: 1   MFPKFLIAFLGILVALSFPTTAKAETVVEKAARTGIITMGGRSDVIPYSYINDKKELVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPLN-AKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D    +   +      P ++Q+  +N   E      + +ID+   NT +T  RE  + 
Sbjct: 61  SLDVASLIEQEVSLYLGKPVEVQFQTINELSEVIPKTANGEIDLAC-NTQFTWQRE--MF 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + +       G   ++ K     +   L G  I V   +  E TL    K+   K   + 
Sbjct: 118 VDYSMPYSLSGIRLLIKKGSLTGTPESLVGKRIAVLPNSLGESTL----KSFQPKAVLVT 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              +++  A   + + DA  GD   L             ++      +  +   + + ++
Sbjct: 174 VAGIDQGIADLVSGKVDAIAGDSVVLAGNIQRVSETDYQLVPSAPYVRYAVGCMMPENNS 233

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
            + N+V+     M+      I +     +        V ++LG      I     + KD+
Sbjct: 234 TFRNLVNLAIAKMLQG--YVIGETKYTDM--------VNKWLGPFGILEIPTE--IIKDY 281

Query: 296 TYRIIRHMGNYGEM 309
              ++    NY ++
Sbjct: 282 FQTVLL---NYEQI 292


>gi|172056715|ref|YP_001813175.1| extracellular solute-binding protein [Exiguobacterium sibiricum
           255-15]
 gi|171989236|gb|ACB60158.1| extracellular solute-binding protein family 3 [Exiguobacterium
           sibiricum 255-15]
          Length = 253

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 16/234 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++  L      + +  AS     K    +  G       F      G   G+D
Sbjct: 1   MKHGLKLAVAALSTAGVLA-ACGASNEEANKDEKVVTVGTEATYPPFTYK-EKGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++         ++Y  ++ K    AL SK+ID+++     T  R+     AF  
Sbjct: 59  IDVMNEVAKRAGYK---VEYKAMDFKGLIPALDSKRIDVIANQMGITDERKE--KYAFSD 113

Query: 121 ITYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                G   I  +K   I ++  L G ++    G+    T  +             ++  
Sbjct: 114 AYTVSGSTIIVNNKTNDIKTLEDLKGKTVGSTQGSLYAKTAEE------AGAKVKYYKGA 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            ++     A R DA   D   +           +   + +   K+     + + 
Sbjct: 168 NQVLKDLEAGRVDAAMNDRLFVLTELKKAG--YKVKAVGETFDKNESGLMMAKN 219


>gi|94985164|ref|YP_604528.1| extracellular solute-binding protein [Deinococcus geothermalis DSM
           11300]
 gi|94555445|gb|ABF45359.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 252

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 80/228 (35%), Gaps = 14/228 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A    +IK+ G +K         F  +K N    GF+VD   AL+  +   P   Q++ 
Sbjct: 20  QARTWDEIKQSGVIKIATEGAFPPFNLMKGN-QLTGFEVDLANALAKQLGLKP---QWVT 75

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                  + L   + D +  +   T  R+    + F    Y  G   +        + + 
Sbjct: 76  QPFDNLLIGLNQDRYDFVIASHGITPERQK--AVDFANPHYCTGGAIVTRSGGP-MTAAA 132

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G S+ VQ GTT    ++              F +  +  AA  A R DA+ GD     
Sbjct: 133 LKGKSVAVQVGTTYLQNVSKVPG----VGAVKTFPKDTDAQAALLAGRVDAWVGDKFTGL 188

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +              D++ K  +  A+ +G+T     ++     ++ 
Sbjct: 189 DVVKAQKGKLVQ---GDLLFKERIGMAVKKGNTTLLKELNSALATLMN 233


>gi|311279534|ref|YP_003941765.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308748729|gb|ADO48481.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 257

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 80/252 (31%), Gaps = 27/252 (10%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L  L   +              G L+ G+      F    A G+ +GF
Sbjct: 1   MKLKALILGMGLLCSLSSFAA-------------GELRFGVEAEYPPFESRNAAGELQGF 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+  A      K  ++  +       L +K+ D ++   + T  R     + F 
Sbjct: 48  DIDLGNAICQAA---QLKCSWVETSFDALIPGLVAKKFDAINSAMNITEQRRK--SIDFT 102

Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      +     G+  +   L G +I V  G+  E    ++++        + ++ 
Sbjct: 103 QPIYRIPSQLVGKSGSGMEATPEGLKGKTIGVLQGSIQETFAKEHWEKQG--VTVVSYKD 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233
                A     R DA     +A  A  L+  +      +   ++        +   + +G
Sbjct: 161 QNLAWADLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVADDTILGSGIGFGLRKG 220

Query: 234 DTEWYNIVSWTH 245
           D      +    
Sbjct: 221 DDATKKQLDAAI 232


>gi|17230679|ref|NP_487227.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Nostoc sp. PCC 7120]
 gi|17132282|dbj|BAB74886.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Nostoc sp. PCC 7120]
          Length = 501

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 77/250 (30%), Gaps = 22/250 (8%)

Query: 1   MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  F     +L LI LF T  S N S      +   L+         F      G+ +
Sbjct: 1   MSKRVFGRWCLVLSLICLFLTGCSGNLS------QGKTLRIATEPAFPPFEFTAQGGNLQ 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF +D   A++SA      K+ +  L       ALQS+ +D    +   T  R  ++   
Sbjct: 55  GFSIDLMNAIASAA---NLKVNFQSLPFDGIIPALQSRTVDAAISSITITAERAETVA-- 109

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    +  G    +       +    L    I VQ GTT          A         F
Sbjct: 110 FSRPYFKAGLAIAIRSSNEDITGFDSLKNKKIAVQIGTTGAGKAKSIPGA-----QIRSF 164

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +           +  DA   D        +         ++  ++++     A  Q    
Sbjct: 165 DSAPLALQELLNNNVDAVINDAPVTL-YAINTGNLQGIKVVEKLLTEEYYGIATAQNSP- 222

Query: 237 WYNIVSWTHY 246
           +  +++    
Sbjct: 223 YLALINDGLN 232


>gi|323489288|ref|ZP_08094520.1| amino acid ABC transporter periplasmic protein [Planococcus
           donghaensis MPA1U2]
 gi|323397175|gb|EGA89989.1| amino acid ABC transporter periplasmic protein [Planococcus
           donghaensis MPA1U2]
          Length = 269

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 13/231 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           ++ + +L  +++ G L  G       F    A+G+  GFDV+  R ++  +  +     +
Sbjct: 33  ASGSDLLTTVQEEGTLVIGTEGTYPPFTFHDASGELTGFDVEIAREVADRLGVEAE---F 89

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISS 139
           L       F  L + + D+++        R       F           ++      I +
Sbjct: 90  LETQWDAMFAGLDAGRFDMVANQVGINPER--QESYEFSSPYITSTAVLVVAEDNTDIET 147

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G  +  Q+ T+     A  F A          E   +      + R DA   D  
Sbjct: 148 FEDLEG-KLSAQSLTSNYAETATSFGA-----ELEGVEGFNQAIELLNSGRVDATVNDNL 201

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +              ++      +       +      +  +     M+ 
Sbjct: 202 TVLDFMKQRPDAKV-KVVDKSEEAAQSGLLFRKDSGAIVDEANKALADMIE 251


>gi|294676181|ref|YP_003576796.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Rhodobacter capsulatus SB 1003]
 gi|294475001|gb|ADE84389.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacter capsulatus SB 1003]
          Length = 258

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 79/252 (31%), Gaps = 26/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L ++  T  +              L+ G       F  V+ +G   GFD
Sbjct: 1   MTLRSKLLACTLALVAMTGAAQAE----------KLRLGTEGAYPPFNFVQPDGTIAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L   I  D    + +  +       L +++ D +  +   T  R+    +AF  
Sbjct: 51  LDIGLELCKRIGAD---CEVVAQDWDGIIPGLIAQKYDFIIASMFITEERK--QQVAFTN 105

Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y      ++ K+  +   S   LSG  +  Q+GTT     ADY           ++  
Sbjct: 106 PYYMAAMTHVVPKESELTEFSNETLSGKVVGAQSGTTQ----ADYAVKMYPDADVRLYPT 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDIISKSPLAPAIIQG 233
            +E      + R D   GD+  L      ++           I         +  A+ Q 
Sbjct: 162 QDEASLDMASGRLDVMVGDMLPLLDFVEKSEDGKCCKLAGAPITDPAFVGEGVGIAVRQE 221

Query: 234 DTEWYNIVSWTH 245
           D      ++   
Sbjct: 222 DNALRERLNKAL 233


>gi|296276927|ref|ZP_06859434.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus aureus subsp. aureus MR1]
          Length = 259

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 75/256 (29%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  FV I  + IL     +++       K    +  G       F+    +G   G+D
Sbjct: 1   MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+      +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 60  IDVIKAVDKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F     ++   +K I     + G  +  Q  T+    LA    A          +  
Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R D    D  +    K          I  +            + D E   
Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQ 228

Query: 240 IVSWTHYAMVTAEELG 255
             +     +    EL 
Sbjct: 229 KFNDGLKKIEENGELA 244


>gi|294499526|ref|YP_003563226.1| sulfur-containing amino acid ABC transporter sulfur-containing
           amino acid-binding protein TcyJ [Bacillus megaterium QM
           B1551]
 gi|294349463|gb|ADE69792.1| sulfur-containing amino acid ABC transporter, sulfur-containing
           amino acid-binding protein TcyJ [Bacillus megaterium QM
           B1551]
          Length = 270

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 85/250 (34%), Gaps = 8/250 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M K +   +  ++ +  +   TN S     KK      +  G  T       +   G   
Sbjct: 1   MKKYWLFLLSIVVAVSVSGCGTNVSSSAGKKKEKDVQTIVVGTGTQFPNICFIDDKGKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DV+  RA+   + D     ++  +      L+L+S +ID+++ N      R+      
Sbjct: 61  GYDVEVVRAIDKELKDYKF--EFKTMEFSNLLLSLESNKIDMIAHNMAQNAERKKKFLFN 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                Y      +   +  I S+  L G  + V A +   + L  Y + H  K   +   
Sbjct: 119 DETYNYSPLYVTVPKNRNDIHSLKDLEGKKMIVGATSNAAVYLDKYNQKHGNKIDVVYAG 178

Query: 178 R-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +  ++     +  R DA      ++           +   + DI+  S +     + D +
Sbjct: 179 QGADDATTQLKTGRADATLATPFSIDFSNQALK--FQQKTVGDIVINSKVYFMFNKKDEK 236

Query: 237 WYNIVSWTHY 246
             + V     
Sbjct: 237 LKSEVDQAIK 246


>gi|307730174|ref|YP_003907398.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Burkholderia sp. CCGE1003]
 gi|307584709|gb|ADN58107.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1003]
          Length = 264

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 19/236 (8%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T+ S  A    DIK+   ++ G+      F     +G+ +GFD+D   A+ + +    +
Sbjct: 19  VTAGSAMA---ADIKE---VRFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KA 69

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K  ++  +      ALQ+++ + ++ +   T  R     + F    Y      I  K  G
Sbjct: 70  KCVWVENSFDGLIPALQARKFNAINSDMTITEQR--RQAIDFTDPIYTIPNQMIAKKGSG 127

Query: 137 IS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           +  + + L G  + V  GT  E      +    +    + ++  ++I A   + R DA  
Sbjct: 128 LQPTPASLKGKHVGVLQGTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDASF 185

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
            D  A     L   + +        +S   L        I +GD    + ++    
Sbjct: 186 QDAEAASKGFLKKPQGAGFEFAGPAVSDEKLLGAGVGFGIRRGDKALKDALNEALK 241


>gi|225027101|ref|ZP_03716293.1| hypothetical protein EUBHAL_01357 [Eubacterium hallii DSM 3353]
 gi|224955565|gb|EEG36774.1| hypothetical protein EUBHAL_01357 [Eubacterium hallii DSM 3353]
          Length = 263

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 65/241 (26%), Gaps = 13/241 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANGD 55
           M K   V++  +++L   +  ++++      +             +T    F       +
Sbjct: 1   MKKFLSVALAAVMMLSLAACGSSSNKAESSSEGGSASDKTYIIATDTTFAPFEFTNDKNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G DVD   A++              L       AL+S Q D        T  R+    
Sbjct: 61  FVGIDVDILAAIAKDQGFKYD---LQSLGFDAAVAALESGQADGTIAGMSITEERQK--K 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + K   I     L G  +  + GT            +        
Sbjct: 116 YDFSEAYYDSYVCMAVKKGSDIKGYEDLKGKKVAAKTGTQGADCAESLKDKYGFD--ITY 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+    +    +     A   D   +           E V        +P   A+++G  
Sbjct: 174 FDDSATMYQDVKTGNTVACFEDQPVMAYGVSQ-GNGLEIVAEEKDNFSTPYGFAVLKGQN 232

Query: 236 E 236
            
Sbjct: 233 A 233


>gi|330807875|ref|YP_004352337.1| putative amino acid transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375983|gb|AEA67333.1| putative amino acid transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 260

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 90/252 (35%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K         + +     +         K+   L+ G++     F    A+G   GFD
Sbjct: 1   MKKALLTLSALALCMAAGVATA--------KEYKELRFGVDPSYAPFESKAADGSLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ + +     K +++  +       L++ + D +  +   T  RE    + F  
Sbjct: 53  IDLGNAICAEL---KVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPAREK--AIDFSS 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     ++  K  G+   V+ L G ++  + GT  E           +K     ++  
Sbjct: 108 ELFSGPTAYVFKKGSGLSEDVASLKGKTVGYEQGTIQEAYAKAVLDKAGVKTQ--AYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236
           +++ +   + R DA   D+       L + +   +     +   +  +  A  I +G++E
Sbjct: 166 DQVYSDLTSGRLDAAIQDMLQAELGFLKSPKGEGYEISKPVDSELLPAKTAIGIKKGNSE 225

Query: 237 WYNIVSWTHYAM 248
              ++     A+
Sbjct: 226 LKALLDKGIKAL 237


>gi|269139652|ref|YP_003296353.1| glutamine ABC transporter periplasmic protein [Edwardsiella tarda
           EIB202]
 gi|267985313|gb|ACY85142.1| glutamine ABC transporter periplasmic protein [Edwardsiella tarda
           EIB202]
 gi|304559522|gb|ADM42186.1| Glutamine ABC transporter, periplasmic glutamine-binding protein
           [Edwardsiella tarda FL6-60]
          Length = 248

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +T  V F   K +  + GFD+D   A++  +          P++      ALQ++
Sbjct: 27  LIVATDTAFVPFEFKKGD-KYVGFDIDLWDAIAKQL---HLSYTLKPMDFSGIIPALQTR 82

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
            +D+       T  R+    + F    Y  G   ++      I  V  L G  + V++GT
Sbjct: 83  NVDLALAGISITEERKK--AIDFSDGYYNSGLMVMVKSDNAQIHGVKDLDGKVLAVKSGT 140

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                  DY KAH        F  ++         R DA   D   +     T     + 
Sbjct: 141 AGV----DYAKAHVKSKDLRQFPNIDNAYLELATGRADAVLHDTPNILYFIKTAGNG-QF 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + D +       A  +G       V+    
Sbjct: 196 KAVGDSLEAQAYGIAFPKGSDALREQVNGALK 227


>gi|27367224|ref|NP_762751.1| arginine ABC transporter periplasmic arginine-binding protein artI
           [Vibrio vulnificus CMCP6]
 gi|27358792|gb|AAO07741.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Vibrio vulnificus CMCP6]
          Length = 243

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L+       S NA+   +IK        +      F  +  N   +GFD
Sbjct: 1   MKKILLASLIGLV-------SANAAAQQEIK------FAMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +   +          AL+ K+ D      D T  R     +AF  
Sbjct: 48  VDLANALCQQL---DASCSFHNQAFDSLIPALKFKRYDAAISAMDITDAR--LEQVAFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 AYYDNSAAFVSFAG-KVADQAALKGKRVGVQNGSTHQSFLLEQM----TGVTAVPYASYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D+  GD + +       +  +     +       +    A+ + +    
Sbjct: 158 DAFLDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNAQYFGNGFGIAVNKDNQALV 217

Query: 239 NIVSWTHYAMVTAEELG 255
           + ++    A+    E  
Sbjct: 218 DQLNAALKAVKANGEYQ 234


>gi|307257739|ref|ZP_07539496.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306863645|gb|EFM95571.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
          Length = 260

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 12/200 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  +  I L  ++ S     L   I  +G +  G       F    A+G   G+
Sbjct: 1   MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L++ + D+++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   ++    + I   S + G     Q  ++    LA    A       +  + 
Sbjct: 117 AAYSWSGAALVVRNDEQKIKQASDVKGVKTA-QTLSSNYGELARANGA-----DIVPIDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDI 198
           + +     +  R DA   D 
Sbjct: 171 MAQGLLLIQQKRADATFNDN 190


>gi|282857868|ref|ZP_06267074.1| extracellular solute-binding protein, family 3 [Pyramidobacter
           piscolens W5455]
 gi|282584250|gb|EFB89612.1| extracellular solute-binding protein, family 3 [Pyramidobacter
           piscolens W5455]
          Length = 249

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 91/256 (35%), Gaps = 17/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K    S++    ++  + +  AS +        L  G +     +     +GD  GFD
Sbjct: 1   MWKRI--SVVAAFSVWIAAAAFAASAMDK----ETLIVGTSGAYPPYEFHGQSGDLVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +      +Q+L +       +L + +ID++S     T  R     ++F  
Sbjct: 55  VDMTEAIARKLGKK---LQWLDMPFDSLLPSLMADKIDLVSAGLSATPERAK--RVSFSS 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   F+        S   L+G ++ VQ GT     + + F           +++ +
Sbjct: 110 PYEISYSAFVTRVDYQPKSADDLAGKTVAVQIGT-----VQETFARALGNVEVKTYQKFD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYAL-KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E        R DA    I A  A  K  +      +     I+ +  A AI + + E   
Sbjct: 165 ECVREVALGRVDATLMGIPAAKAYVKAKDFDGKIAIAFNRQITGADKAIAISKKNVELTA 224

Query: 240 IVSWTHYAMVTAEELG 255
            VS     M    EL 
Sbjct: 225 AVSRIIEEMDKNGELQ 240


>gi|224826259|ref|ZP_03699361.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224601360|gb|EEG07541.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 254

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 77/242 (31%), Gaps = 21/242 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L L +L    +   A           ++   +     F+++  +G   GFD D  RAL 
Sbjct: 6   VLTLTLLCALPWLAQAQT---------VRIVTDASYPPFSKMNPDGSITGFDPDITRALC 56

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +       + +   ++      ALQ+K+ D+   +   T  R     + F  + +     
Sbjct: 57  AEA---KLECELKAMDFDGIIPALQAKKFDVAIASMSITPERAKV--VDFSDMYFKIPGR 111

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +  +   I+      G  I V   +T        +          V+ ++ +       
Sbjct: 112 LMAREGTQINDA-WFKGKKIGVLRSSTQMQEANAKWAPKG--SQIKVYSKITDAFLDLTG 168

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWT 244
            R DA   D +   +  L          +  + +        A A+ +G+ E    ++  
Sbjct: 169 QRLDAVYLDATIGESDFLQKPMGKGFAFVGPVYNDPKYYMGAAMAVGKGNKELRAKLNAA 228

Query: 245 HY 246
             
Sbjct: 229 LK 230


>gi|322373408|ref|ZP_08047944.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C150]
 gi|321278450|gb|EFX55519.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C150]
          Length = 731

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  + +FF   +  ++          +    +T    F    ++  +KG D
Sbjct: 1   MKKKLLTLFLSAMSVFFVFGAKASAS--------TISVVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   +            A+Q+ Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKREKWD---VNQTYPGFDAAVNAVQAGQADALMAGTTVTDARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             IS   QL G ++ V+ GT  +  L      +        F+  +
Sbjct: 108 TYYDTSIVIYTRSSDKISDYKQLKGKTVGVKNGTAAQSWLDKNASKYGF--TVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  +   DA   D   +         
Sbjct: 166 LMNNSLDSGSVDAAMDDTPVVQYAIGQGKD 195



 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 55/179 (30%), Gaps = 7/179 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +      +++    F     +G + G DVD   A++    +    ++           A
Sbjct: 273 AKETYTISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNA 329

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS Q D +      T  R+      F    Y       + K   +     L G +I  +
Sbjct: 330 VQSSQADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVKKGSNVKKYEDLKGKTIGAK 387

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            GT++   L +    +        ++    +  +  +   DA   D + L         
Sbjct: 388 NGTSSYSWLEENADKYGF--TLRAYDEASTMYDSLNSGSIDALMDDEAVLLYAIQQGRN 444


>gi|257463484|ref|ZP_05627878.1| amino acid-binding protein [Fusobacterium sp. D12]
          Length = 238

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 27/245 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F   + + ++    F+              L  G N     F  +   G   GFD
Sbjct: 3   MMK-YFGMFILMGMMSAVMFA------------KTLYVGTNAEFAPFEYL-EKGKITGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL+  +  D   I+   +       ALQ K++D++      T  R+    + F  
Sbjct: 49  IELMNALAKEMKMD---IKIENMAFDGLLPALQMKKVDVVIAGMTETPERKK--AVNFTK 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  I  K K I    +LSG  + V  G T +  ++D   A         F+   
Sbjct: 104 PYFKAKQVIITKKGKDIKDFQELSGKKVGVMLGFTGDAVVSDIKGAK-----VQRFDATY 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A    + DA   D         +     +  I      +   A A+ + D      
Sbjct: 159 SAVMALENGKVDAVVADSEPAKKYIASYK---DLSIASAKAEEEDYAIAVRKNDKVLLEN 215

Query: 241 VSWTH 245
           ++   
Sbjct: 216 LNKAM 220


>gi|260777099|ref|ZP_05885993.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260606765|gb|EEX33039.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 279

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 8/246 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K    ++L L +   T  ++    L  I +RG L+ G++T  V +A     GD  GF++
Sbjct: 14  FKQAITALLGLAVALPT-LASETPNLDKINERGTLRVGMST-FVPWAMRDKQGDLIGFEI 71

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L++        ++++P        AL +K+ D++      T  R  S  + F   
Sbjct: 72  DVAERLAADSGWK---VEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTTP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               G     +K+            S  V+             +    K   + F+   +
Sbjct: 127 YSHSGVQVAANKELASGFSEMSDFNSRRVKIAARRGAFTVQVAREAFPKAKILQFDDDAQ 186

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                      A            + N      +   + +SK   A A+  G+++     
Sbjct: 187 AFQEVLNGNAHAVIASSPKPEHEAVKNADKL-FIPFNERLSKGNEAFAVRLGESDKQAFF 245

Query: 242 SWTHYA 247
                A
Sbjct: 246 DQWIQA 251


>gi|255589615|ref|XP_002535024.1| ATP binding cassette (abc) transporter, putative [Ricinus communis]
 gi|223524174|gb|EEF27358.1| ATP binding cassette (abc) transporter, putative [Ricinus communis]
          Length = 437

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 10/175 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L +IK +G L CG+   +  F           G+D++ C+ +++ +   P    +  +
Sbjct: 29  DQLQNIKSKGILTCGVLGTVPPFGYQDPKTRKPIGYDIEICKIVANHLGVKP---IFKVI 85

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +   R   +   +ID+++ +  WT  R  +  + +    Y              +S +QL
Sbjct: 86  SPAARIPEVDQGRIDVITGSLGWTPAR--AQQVDYSYSYYVTETVLGFPADAKFTSWNQL 143

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +G  I     TT+    A   +    K   I F+ V +   A R  + DA   D 
Sbjct: 144 AGKRIGAVNSTTS----AAAAREKLPKSSVITFDDVAQAFLALRQRKTDAVAMDE 194


>gi|296875916|ref|ZP_06899976.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus parasanguinis ATCC 15912]
 gi|296433078|gb|EFH18865.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus parasanguinis ATCC 15912]
          Length = 275

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 8/245 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    S L L+ +  TS     S       +  ++ G       F+  + +G   G+++
Sbjct: 4   KKVIKYSTLGLVAVLATSALVACSSGKSASGKKTIEVGTVGTTKPFSYEEKDGKLTGYEI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  R +      D  ++ +        F  L S +  I + N  ++  RE      +   
Sbjct: 64  EVLREIFK--GSDKYEVNFNKTEWSSVFAGLDSDRFQIGANNISYSKEREE--KYLYPNP 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER--V 179
              +    ++ K   I S+  L G    V  GT+T   L DY K H+     + +    +
Sbjct: 120 YARNPLVLVVPKDSSIKSLDDLGGKKTEVVQGTSTAKQLEDYNKKHSDNPTNLQYTDGTI 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238
           + I A     R D    +        + +       ++     + P     I + D +  
Sbjct: 180 QTIMANLADGRTDYKIFER-ISVDTIIRDQGYDNLKVIELPSDQQPYVYPIIAKEDKDLQ 238

Query: 239 NIVSW 243
             V+ 
Sbjct: 239 KFVNK 243


>gi|241663976|ref|YP_002982336.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240866003|gb|ACS63664.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 254

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 12/210 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +        V  NG   GFDVD   AL+  +      +++  ++ K     L S+
Sbjct: 35  LRVATDATFAPMEFV-ENGKRTGFDVDLIEALARTMG---RPVEWTDIDFKGLVPGLISR 90

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D+       T  R+  +     P  +      +      I + + L+G  + VQ GT 
Sbjct: 91  RFDVAISGIYITEERKKVVDFT-VPYYHGGLVAMVKQGNTAIKTPADLNGKKVSVQVGTK 149

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   L    K +  K   +  E+ E++       R DA      A               
Sbjct: 150 SVNYL----KENYPKVERVEVEKNEQMFNLVEIGRADAAVTGRPAAAYYVKARPG---LR 202

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           ++   ++      A+ +   E    ++   
Sbjct: 203 LVEPALTSEEYGIAVRRDQPELTKALNAAL 232


>gi|187929867|ref|YP_001900354.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|187726757|gb|ACD27922.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
          Length = 254

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 12/210 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +        V  NG   GFDVD   AL+  +      +++  ++ K     L S+
Sbjct: 35  LRVATDATFAPMEFV-ENGKRTGFDVDLIDALARTLG---RPVEWTDIDFKGLVPGLISR 90

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D+       T  R+  +     P  +      +      I + + L+G  + VQ GT 
Sbjct: 91  RFDVAISGIYITEERKKVVDFT-VPYYHGGLVALVKQGNTAIKTPADLNGKKVSVQVGTK 149

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   L    + +  K   +  E+  E+       R DA      A               
Sbjct: 150 SVNYL----RENYPKVERVEVEKNNEMFNLVEIGRADAAVTGRPAAAYYVKARPG---LR 202

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           ++   ++      A+ +   E    ++   
Sbjct: 203 LVEPALTTEEYGIAVRRDQPELTKALNAAL 232


>gi|323493013|ref|ZP_08098149.1| prephrenate dehydratase [Vibrio brasiliensis LMG 20546]
 gi|323312749|gb|EGA65877.1| prephrenate dehydratase [Vibrio brasiliensis LMG 20546]
          Length = 258

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 77/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L + +L         S L DI  +G L+ G                 ++GF
Sbjct: 1   MKKYIL--ALGMCLLSVGQAMAETSRLHDILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +  +   ++Y+  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVE---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
                             S       A + V A   T  E  + ++F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWGDFDKAEVKVAATLGTVQEKMVKEFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYLN 234


>gi|158424306|ref|YP_001525598.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158331195|dbj|BAF88680.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 269

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 13/228 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A  L +I K G ++ G+N  L    +     +  GFDVD+   ++  +      +Q 
Sbjct: 23  AAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVGFDVDYAGEIAKLLGVKLEVVQ- 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             + + +R   + + +ID +         R     + F    + +  G +  K    +  
Sbjct: 82  --VGSPDRIPFVTAGKIDFVMGAMTRNTDRAKV--IDFTVPVHTEVLGVLTTKANTFTDW 137

Query: 141 SQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            Q      +     G+T    + +            + +   +   A    R  A    I
Sbjct: 138 RQFDDPSVTFVQVRGSTPVKFIEENLPKAK----VTLLDNYPDAVRALAQGRGTAMIDVI 193

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   +  +    +  I+   I     +  + +G T   + ++   +
Sbjct: 194 DFM--GEHMSKHKVDWRIVETPIDVYYCSLGVAKGSTGLKDWLNVAIF 239


>gi|121594463|ref|YP_986359.1| extracellular solute-binding protein [Acidovorax sp. JS42]
 gi|120606543|gb|ABM42283.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 290

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 19/239 (7%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+++   +   +A +L D+ +RG L+  +      F   +  G   GF+ +    L++ 
Sbjct: 41  LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 99

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +   P    ++          LQS + DI          R       F           I
Sbjct: 100 LEVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 154

Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +         S+  L G  + V  GT                 +   +    E      +
Sbjct: 155 VRADDTRQFRSLEDLKGLKLGVGQGTNYADLAKSVA-----GINVRTYPGAPEYLQDLAS 209

Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R DA   D         +          + P      P      + + ++   ++   
Sbjct: 210 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 264


>gi|303246937|ref|ZP_07333213.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
 gi|302491644|gb|EFL51527.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
          Length = 291

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 86/255 (33%), Gaps = 18/255 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           K    S+LC   L F+  +  AS+       I+K G +  G+N            +    
Sbjct: 11  KRKLASLLCGFALLFSGTAFAASLHDMLPDSIQKSGKIIIGVNGIFPPMEFKAPGSDTLD 70

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+  +A++  +     KI++   N  +   ++ +K++D++          E    L 
Sbjct: 71  GIDVELAQAIAKELG---IKIEFDDQNFDQLINSINTKRVDMVLSGMS--DSAERRKSLD 125

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKY 171
           F        Q F        I ++  LSG ++ V A T    T+  + K +         
Sbjct: 126 FIDYFNSGTQCFTTKALAGKIKNLEDLSGKTLAVSASTDYLTTMQKWNKENLLDKGKPGI 185

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           + +  +            R  A    +S          +    V +  ++  +P   A  
Sbjct: 186 NIMAVDSAASARMQMLQGRAQA--SALSPEALGWANVQQKGAFVAVGPLLESNPYGIAFS 243

Query: 232 QGDTEWYNIVSWTHY 246
           + + +  + V     
Sbjct: 244 KDNAKLRDAVYAALQ 258


>gi|296268321|ref|YP_003650953.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
 gi|296091108|gb|ADG87060.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
          Length = 282

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 84/256 (32%), Gaps = 25/256 (9%)

Query: 6   FVSILCLIILFFTSFSTNASILG-------------DIKKRGFLKCGINTGLVGFAEVKA 52
             +   +  L   +                       +   G L    N     F   + 
Sbjct: 13  IGATALITALMVAACGGGGDTTASSPSEAASAAGGVKLVNPGKLTTCTNIPYEPFQFQQG 72

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFDVD    +++ +      +      A +   AL + + D+ +     T  R+ 
Sbjct: 73  D-KIVGFDVDIVDLVANKLGVQQEIVDIDF-AAIKSGAALNAGKCDVAAAGMTITEERK- 129

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170
              L F    +   Q  +  K  G++S+  +   G  +  QA TT    +       +  
Sbjct: 130 -QNLDFSVPYFDASQALMAKKGSGVTSLDDVKAKGLKLGAQASTTGLDYVK------SQG 182

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
           + PI F   ++     +A R D    D+  +       +  +E+ ++  + +       +
Sbjct: 183 FEPIEFADSQKQLNGLQAGRVDVIVQDLPVVLTWLKKPEISAEYEMVGSLDTGEQYGIGL 242

Query: 231 IQGDTEWYNIVSWTHY 246
            +G+TE  N+V+    
Sbjct: 243 KKGNTELLNVVNEVIN 258


>gi|126435629|ref|YP_001071320.1| extracellular solute-binding protein [Mycobacterium sp. JLS]
 gi|126235429|gb|ABN98829.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 311

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 16/243 (6%)

Query: 24  ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A+ L   IK RG L  G+N           +G   GFDVD   A++S +        Y  
Sbjct: 61  ANTLPQPIKDRGSLIVGVNVPYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAE---YRE 117

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            + ++   ++Q    D+   +   T  RE    + F    +  G  +      GI   + 
Sbjct: 118 SDFEKIIPSIQGGTYDVGMSSFTDTKEREA--SVDFV-TYFSAGIQWAQKAGAGI-DPAN 173

Query: 143 LSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G  + VQ+ T  E             A       + F+  + +  A    + DA + D
Sbjct: 174 ACGKRVAVQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSAD 233

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                          +     +I   +P    + +G       +      ++        
Sbjct: 234 SPVTA--YAVKQSNGKLETAGEIFDAAPYGWPVAKGSP-LGQSLQQALEHLIETGAYEQI 290

Query: 258 QKN 260
            KN
Sbjct: 291 AKN 293


>gi|22125570|ref|NP_668993.1| glutamine ABC transporter periplasmic protein [Yersinia pestis KIM
           10]
 gi|45442117|ref|NP_993656.1| glutamine ABC transporter periplasmic protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108807999|ref|YP_651915.1| glutamine ABC transporter periplasmic protein [Yersinia pestis
           Antiqua]
 gi|108812269|ref|YP_648036.1| glutamine ABC transporter periplasmic protein [Yersinia pestis
           Nepal516]
 gi|145599204|ref|YP_001163280.1| glutamine ABC transporter periplasmic protein [Yersinia pestis
           Pestoides F]
 gi|149365579|ref|ZP_01887614.1| putative glutamine-binding periplasmic protein [Yersinia pestis
           CA88-4125]
 gi|162419528|ref|YP_001606262.1| glutamine ABC transporter periplasmic protein [Yersinia pestis
           Angola]
 gi|165925483|ref|ZP_02221315.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937648|ref|ZP_02226210.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008226|ref|ZP_02229124.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213794|ref|ZP_02239829.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399071|ref|ZP_02304595.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422253|ref|ZP_02314006.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426965|ref|ZP_02318718.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167466397|ref|ZP_02331101.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis FV-1]
 gi|170023841|ref|YP_001720346.1| glutamine ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis YPIII]
 gi|218929601|ref|YP_002347476.1| glutamine ABC transporter periplasmic protein [Yersinia pestis
           CO92]
 gi|229838046|ref|ZP_04458205.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895245|ref|ZP_04510419.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229898606|ref|ZP_04513751.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902605|ref|ZP_04517722.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270490214|ref|ZP_06207288.1| glutamine ABC transporter periplasmic protein [Yersinia pestis KIM
           D27]
 gi|294504264|ref|YP_003568326.1| glutamine ABC transporter periplasmic-binding protein [Yersinia
           pestis Z176003]
 gi|21958473|gb|AAM85244.1|AE013770_10 glutamine-binding periplasmic protein for high-affinity glutamine
           ABC transporter [Yersinia pestis KIM 10]
 gi|45436980|gb|AAS62533.1| putative glutamine-binding periplasmic protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108775917|gb|ABG18436.1| glutamine-binding periplasmic protein [Yersinia pestis Nepal516]
 gi|108779912|gb|ABG13970.1| putative glutamine-binding periplasmic protein [Yersinia pestis
           Antiqua]
 gi|115348212|emb|CAL21140.1| putative glutamine-binding periplasmic protein [Yersinia pestis
           CO92]
 gi|145210900|gb|ABP40307.1| glutamine-binding periplasmic protein [Yersinia pestis Pestoides F]
 gi|149291992|gb|EDM42066.1| putative glutamine-binding periplasmic protein [Yersinia pestis
           CA88-4125]
 gi|162352343|gb|ABX86291.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis Angola]
 gi|165914398|gb|EDR33013.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922592|gb|EDR39743.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992608|gb|EDR44909.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204968|gb|EDR49448.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958759|gb|EDR55780.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051575|gb|EDR62983.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054067|gb|EDR63895.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169750375|gb|ACA67893.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis YPIII]
 gi|229680052|gb|EEO76151.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229688154|gb|EEO80225.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694412|gb|EEO84459.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701731|gb|EEO89756.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262362383|gb|ACY59104.1| glutamine ABC transporter periplasmic-binding protein [Yersinia
           pestis D106004]
 gi|262366309|gb|ACY62866.1| glutamine ABC transporter periplasmic-binding protein [Yersinia
           pestis D182038]
 gi|270338718|gb|EFA49495.1| glutamine ABC transporter periplasmic protein [Yersinia pestis KIM
           D27]
 gi|294354723|gb|ADE65064.1| glutamine ABC transporter periplasmic-binding protein [Yersinia
           pestis Z176003]
 gi|320014658|gb|ADV98229.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 247

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   + +  + GFD+D   A++  +     K    P++      A
Sbjct: 23  AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKL---DLKYTLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150
           LQ+K +D+       T  R+    + F    Y  G   ++      I S + L G  + V
Sbjct: 79  LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNDIKSEADLQGKVLAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +     DY KA+        F  ++         R DA   D   +     T   
Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +   + + I       A  QG ++    V+    ++  
Sbjct: 193 G-QFKAVGESIKAQQYGVAFPQG-SDLREKVNAALKSLKE 230


>gi|304396804|ref|ZP_07378684.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304355600|gb|EFM19967.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 275

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 79/241 (32%), Gaps = 17/241 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L DIK  G +  GI+     +     NG+  G+ V   R+ +  +      + +    
Sbjct: 20  DTLTDIKSAGKITVGIDPTFPPYEYTSDNGEVTGYSVAIMRSFADDLGVK---LVFQKTA 76

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS------ 138
                  L S   +    + + T  R     + F         G +M K           
Sbjct: 77  FSGILPGLISGSFNAEGSSLNVTAERAK--KVLFTVPYSKTVNGVLMRKSDAEKISKSGL 134

Query: 139 SVSQLSGASICVQAGTTTELTLADYF----KAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           S  +LSG    V++ +  E  L  +     KA       I  + +++  +     R D  
Sbjct: 135 SPERLSGLRGAVKSASVPEQLLKSFNEALKKAGKPPITIISVDTLDQTVSTLMTKRADFV 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             DI+ L  +      P + V   ++     +A A  + D      +S    AM  + +L
Sbjct: 195 LDDIAVLAPIVKKY--PDKLVQAGEVGPSQWMAWATRKEDLSLNKAISDHILAMQQSGKL 252

Query: 255 G 255
            
Sbjct: 253 A 253


>gi|170718983|ref|YP_001783436.1| extracellular solute-binding protein [Haemophilus somnus 2336]
 gi|168827112|gb|ACA32483.1| extracellular solute-binding protein family 3 [Haemophilus somnus
           2336]
          Length = 260

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 11/210 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  F+      I+  T     AS+L  I  +G +  G       F    + G   G+DV
Sbjct: 3   KKITFLFTTVFAIVANTQALAQASLLDRINNKGTITVGTEGTYAPFTYHDSTGKLTGYDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  RA++  +      +++           L++ + D+++     T   E          
Sbjct: 63  EVTRAVAKKLG---VTVEFKETQWDAMLAGLKAGRFDLVANQVALT-TPERQATFDKSEP 118

Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             + G   +    +  I  V  + G     Q  ++    LA  ++A       +  + + 
Sbjct: 119 YSWSGAMLVARDNETRIKQVEDVKGLK-AAQTLSSNYGELAQKYQAK-----IVPIDGMA 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +     +  R D    D  AL         
Sbjct: 173 QGLLLIQQKRADMTFNDALALLDYLKKYPN 202


>gi|160936155|ref|ZP_02083528.1| hypothetical protein CLOBOL_01051 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440965|gb|EDP18689.1| hypothetical protein CLOBOL_01051 [Clostridium bolteae ATCC
           BAA-613]
          Length = 296

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 82/279 (29%), Gaps = 45/279 (16%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNA----------------SILGDIKKR---------- 33
           M K    +++  L+    T+    A                +   + K            
Sbjct: 11  MKKKVLAITMAALMAASLTACGGGAKETTAAATTAEEKAEDTTAAESKDETSAEAAETEA 70

Query: 34  ------GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
                 G L    N     +     +    G D +  +A++  +     +++   +    
Sbjct: 71  AKEAAGGKLVMATNAEFPPYEYHDGD-AIVGIDAEIAKAIADELG---MELEIEDIAFDS 126

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               + S + D+       T   +    + F        Q  I+ +   I+S   L G  
Sbjct: 127 IIPEIVSGKADMGLAGMTVTE--DRMQSVDFSDTYAKASQKIIVTEDSEIASPDDLKGVI 184

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ GTT ++ ++D             + +  E   A    + DA   D          
Sbjct: 185 VGVQLGTTGDIYVSDLEA---DGTTVERYNKGFEAVQALSQGKIDAVVIDGEPAKTFVAE 241

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            +      IL +  +    A A+ +G+TE    ++    
Sbjct: 242 TEG---LKILDESFTDEEYAIAVKKGNTELLEKINGALK 277


>gi|304397038|ref|ZP_07378917.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
 gi|304355187|gb|EFM19555.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Pantoea sp. aB]
          Length = 243

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 25/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +   L  L   + +              ++   +     F  +    +  GFD
Sbjct: 1   MKKWIIAA--ALATLTINAQAAE-----------KIRFAASATYPPFETLDRENNLVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  + F  
Sbjct: 48  IDLAKALCQQM---KAECTFTNNAFDSLIPSLKFRRYDAVISGMDITAER--SKQVDFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    SS S L    I V+ GTT +  L D           + ++  +
Sbjct: 103 PYYANSAIVIAQKG-KFSSFSDLKDKRIGVENGTTHQKFLQDKHPE----VKVVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + +     TN   +     +       + L  A+ +G+T   
Sbjct: 158 NAILDMKNGRLDGVFGDSAVVNQWLKTNPDLATVGEHVTDADYFGTGLGIAVRKGNTALR 217

Query: 239 NIVSWTHY 246
           +  +    
Sbjct: 218 DQFNQALT 225


>gi|237799095|ref|ZP_04587556.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331021949|gb|EGI02006.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 258

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 81/246 (32%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + L +L    F+              LK GI      FA    +G   GFD
Sbjct: 1   MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   AL   +     K  ++         AL+ ++ID +  +   T  R+    + F  
Sbjct: 51  YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +M +   +  S+++L G  I VQ G+  E    +      +   P  +   
Sbjct: 106 KYYNSPARLVMKEGTKVSDSLAELKGKKIGVQRGSIHERFAREVLAPAGVIVTP--YGSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233
            EI     A R D    D + L    L  D    +          P      +  A+ +G
Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222

Query: 234 DTEWYN 239
           D    +
Sbjct: 223 DKANLD 228


>gi|225569794|ref|ZP_03778819.1| hypothetical protein CLOHYLEM_05888 [Clostridium hylemonae DSM
           15053]
 gi|225161264|gb|EEG73883.1| hypothetical protein CLOHYLEM_05888 [Clostridium hylemonae DSM
           15053]
          Length = 274

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 76/252 (30%), Gaps = 30/252 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M      ++LC ++      +         +K G L+ G+   ++ F  +    G + G 
Sbjct: 10  MKMRRLSALLCGLLTLAAVLTGCGGR----EKSGTLRVGVRDDIMNFGYLNKETGRYYGM 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    L+  +  +   ++++ +    R   LQ  ++D L         R+      F 
Sbjct: 66  EIDLANKLAEKLGYEE--VEFVTVQPDNRKEMLQEGKVDCLVAAYSIADTRKE--NFDFS 121

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH------- 172
           P  Y D    +  K     S   L   ++ + +G+     LA       +          
Sbjct: 122 PPYYTDETVIMAEKSALFHSADDLKDQTVGIVSGSNAGPLLAQKLYDLGIITDKVVSNTD 181

Query: 173 ---------PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                     +   +  ++D A      DA   D                   L  ++++
Sbjct: 182 TATVYEGAGVVKTAKYSDLDTALETGAVDAVCMDKCIAGTYMN-----ENREFLDVVVAE 236

Query: 224 SPLAPAIIQGDT 235
                A  +   
Sbjct: 237 QQYGVATRKDSD 248


>gi|291518711|emb|CBK73932.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 278

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 94/268 (35%), Gaps = 32/268 (11%)

Query: 1   MYKDFFVSILCLIIL--FFTSFSTNA------------------SILGDIKKRGFLKCGI 40
           M +     +L   ++   F +  ++A                  S L  I+++G L  GI
Sbjct: 1   MMRKIIALLLSATMMTAAFVACGSSAAQPASDTASTEAPSADSESDLAYIQQKGTLIVGI 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
            T          NG+W GFD D  + ++  +  +   ++++ ++   + L LQ+K ID++
Sbjct: 61  -TDFAPMDYKDDNGEWIGFDADLAKKVAENLGVE---VEFVEIDWDNKILELQNKSIDVV 116

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                 T     S+  +   +           K   I +    +  S  V++G+  E   
Sbjct: 117 WNGMTLTPEVTSSMECSKAYLNNAQVVVVAADKADSIKTSEDAAALSFAVESGSAGEAAA 176

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            +        Y+ +  +   +      A   DA   D+    A+        +     ++
Sbjct: 177 EE------NSYNYVAVKSQADAVMEVAAGTSDACIIDLLMAGAMIGEGTSYPDLEHTIEL 230

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            ++        +G ++  N ++    A+
Sbjct: 231 TTEE-YGIGCRKG-SDLANYINEQLKAL 256


>gi|255281308|ref|ZP_05345863.1| amino acid ABC transporter, amino acid-binding protein [Bryantella
           formatexigens DSM 14469]
 gi|255268265|gb|EET61470.1| amino acid ABC transporter, amino acid-binding protein [Bryantella
           formatexigens DSM 14469]
          Length = 299

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 88/308 (28%), Gaps = 46/308 (14%)

Query: 1   MYKDFFVS-----ILCLIILFFTSFSTNASI----------------------------- 26
           M K    +     IL   +L         +                              
Sbjct: 1   MKKRNLAAAAMSGILAAAMLAGIPVYAEGTTEAAGETEITTEAAEAAEETEAEGTGEGGL 60

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           L  IK++G L  G  +G   +  +    AN D  G D++  +A++  +  +   ++   +
Sbjct: 61  LESIKEKGKLVVGTASGYPPYEFIDITSANQDIVGIDMELAQAIADKLGVE---LEIQDM 117

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           N      ++ + ++D+       T  R+ ++  +   +        +        ++   
Sbjct: 118 NFTSLISSIPTHKVDMAIAGISITEERKETMDFSEPYLEAEQKMLILSENADKYKTLEDF 177

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           SG ++  +  TT E    +           +  E+V +     +  +      +      
Sbjct: 178 SGETVAAEKSTTQETVCQELL----TDSPLVSLEKVPDCLMELQNGKVAGVMVENIVGEQ 233

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
             +  D         +       A A+ +G+ +   IV+                +  ++
Sbjct: 234 YVIAYDN--IVFSDAETGKLKTSAVAMDKGNEDLMEIVNEVIKENQENGNFDKWVEEYSE 291

Query: 264 VSKDTTNP 271
            +      
Sbjct: 292 KAASNAQQ 299


>gi|88601351|ref|YP_501529.1| extracellular solute-binding protein [Methanospirillum hungatei
           JF-1]
 gi|88186813|gb|ABD39810.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 276

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 93/265 (35%), Gaps = 29/265 (10%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI----------LGDIKKRGF----LKCGINTG 43
           M +        I  +++LF +  +T                ++ +        + GI+  
Sbjct: 2   MKRKGLVLVSLIGLVLLLFMSGCTTTEQTAPSSEVHVQPTEEVSQAKESVPLYRVGIDAA 61

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F+ V  +G   GFDVD  + ++     +   +++LP+       AL + +ID++   
Sbjct: 62  YQPFSMVGPDGKATGFDVDSMKWIAKDQGFE---VEFLPIAWDGIIPALLAGKIDLVYAG 118

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLAD 162
              T  R+    + F    +   Q  ++ +   I+    +     I  Q G T  + + +
Sbjct: 119 MTITEERKE--KVNFSKPYWTVNQMVVVKEGSPITLEQVKNGSVVIGTQRGCTAAIWIDE 176

Query: 163 Y--FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
               ++     +  +++          + R DA   D + +  +     +P   + + + 
Sbjct: 177 NLVNQSLMPAQNLKLYDNTPLAVDDLVSGRIDAVMYDSTVMNDIIA--GKPVAKIGMVET 234

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTH 245
                   A+ + DTE    ++   
Sbjct: 235 N--EDFGIAVRKEDTELLEKLNSGL 257


>gi|295397425|ref|ZP_06807512.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294974326|gb|EFG50066.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 727

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 76/258 (29%), Gaps = 12/258 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKG 58
           M       S+  + +L          +       G       +T    F  V  +G++ G
Sbjct: 1   MKHIKLSFSVFIVSLLTLLFSIAPGKVEATETGNGETYIIATDTTFAPFEFVDDSGEFVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DVD   A++     D        L       A+++ Q D +      T  R+      F
Sbjct: 61  IDVDILAAIAEDQGFDYE---LRSLGFDAAVQAVETGQADAVIAGMSITEERK--QTFDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y  G  F + +     S+  L G S+ V+ GT      AD    +    +   F+ 
Sbjct: 116 SEPYYESGTAFAVLEDSEYQSLEDLEGQSVAVKTGTQGATIAADLADQYGFTVN--TFDD 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI-IQGDTEW 237
              +     +    A   D   +               + D   ++P   A+    + E 
Sbjct: 174 SPNMYQDVISGNSAAAVEDYPVM--GYAIESGGLNLRFIGDNFEEAPYGFAVLRGQNAEL 231

Query: 238 YNIVSWTHYAMVTAEELG 255
             + +     +  + E  
Sbjct: 232 LEMFNAGLENIKASGEYD 249



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 29/266 (10%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
                 +T    F  V  NGD+ G DV+   A+++   +     +  PL       A+++
Sbjct: 276 TYTIATDTTFAPFEFVDENGDFTGIDVELLDAIAA---NQGFNYELKPLGFDAAVQAVET 332

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +Q D +      T  R+      F    +  G  F +     I S   L G ++ V+ GT
Sbjct: 333 QQADAVIAGMSITEERK--QTFDFSEPYFDSGTTFAVLADSDIESYEDLEGQNVAVKTGT 390

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                       +        F+    +     +    A   D   +      N      
Sbjct: 391 QGATIAQSMADEYGF--TVTTFDDSSNMYQDVISGNSAAAVEDYPVMA--YAINSGGLNL 446

Query: 215 VILPDIISKSPLAPAI-IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            ++ D +       A+    + E   + +    A+  + E                +  V
Sbjct: 447 KVIGDQLEPVSYGFAVLAGENQELLQMFNDGLAAIQESGEY---------------DEIV 491

Query: 274 QRFLGIDKSSNIGEALG----LTKDW 295
            ++LG  +      + G    L  ++
Sbjct: 492 GKYLGDSEEGETSSSNGFLTQLANNF 517


>gi|288916725|ref|ZP_06411099.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f]
 gi|288351799|gb|EFC86002.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f]
          Length = 375

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 23/260 (8%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK--IQY 80
            SI+ DI ++G L   I T       +       +GFDVD   A+++A+F +  +  I++
Sbjct: 92  GSIMDDIWRKGDLTVAIVTDAPPAGSMNWTEPTLEGFDVDIAGAIATALFGNGGESKIRF 151

Query: 81  LPLNAKERFLALQS--KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
             +  K+R   L++    +DI+      T  R+    + F  + +      ++  K G  
Sbjct: 152 RAVTTKDRAALLKNPNSGVDIVVATYTITCERKEKENILFSGVYFESRFALLVPAKAGFK 211

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCDAY 194
           ++   +G +IC   G T+   L D  ++     +      +  R  +   A +    D  
Sbjct: 212 TLRDFAGYTICSTEGATSVQKLEDAARSALAPGDPPLTITLRPRAADCLVAVQQGEADGV 271

Query: 195 TGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQ-----------GDTEWYNI 240
             D   L  +K  +     P   V         P   A+ +            D E+   
Sbjct: 272 ATDDIILAGMKARDQYVDVPPGGVTAAGDDLAEPYGVALHRSHLDDPNANKLRDEEFVQF 331

Query: 241 VSWTHYAMVTAEELGITQKN 260
           V+     M+ +     + +N
Sbjct: 332 VNGVLRDMMASGGWATSYQN 351


>gi|254254899|ref|ZP_04948216.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124899544|gb|EAY71387.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 264

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 87/250 (34%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++I+ L I   ++++ + +          ++ G  T    F   + +G   GFD
Sbjct: 6   MRKPHLLAIVLLAISTTSAYAGDWTT---------VRFGTATSYPPFHSERPDGSLTGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    ++  ++  +      ALQ+++ D +      T  R   +  +   
Sbjct: 57  IDLGNEICRRM---HARCVWVESDFDSIIPALQARKFDGIVSALSITPQRARQIAFS-SK 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +     +         + + + L G  I V  G+T E     Y++        + +E  E
Sbjct: 113 LYDIPARLVARKGAGLLPTPASLKGKRIGVVQGSTQERYAQTYWEPDG--AIVVSYEDQE 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
            + A     R DA   + +      L     +++      ++   +     A  + + DT
Sbjct: 171 LVYADLVDGRLDATLTNAAQAEYGFLDTPEGADYAFAGQPLTDPTIFGVGTAVGLRKQDT 230

Query: 236 EWYNIVSWTH 245
           +    +    
Sbjct: 231 DLEARIDRAI 240


>gi|289664060|ref|ZP_06485641.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris
           pv. vasculorum NCPPB702]
          Length = 257

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 81/254 (31%), Gaps = 10/254 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + + +  ++       +  AS L  + + G L+         ++ ++ +G ++G D+D 
Sbjct: 2   RYRICLALVLSCGMAHAAAPASRLDVVLQSGVLRVCTTGDYRPYSLLREDGQFEGSDIDL 61

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            ++L++++    ++++++  +  +    L +++ DI       TL R+     +      
Sbjct: 62  AQSLATSLG---ARVRFVRTSWPQLMPDLLAERCDIAVGGISVTLQRQRQASFSAVLDVD 118

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEE 181
                     +    S+ QL+   + V      T E          N      +F     
Sbjct: 119 GKIPLVRCADQARYRSMEQLNRPQVRVIEPPGGTNEAFARRELPRAN----VRLFADNTT 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           I       R D    D S     +              +      A  + + D  W   V
Sbjct: 175 IFEELLEQRADVMITDASEALYQQARLPGLCAIAPEHPLQYSE-KAFLLPRDDQAWKAYV 233

Query: 242 SWTHYAMVTAEELG 255
               +    + E  
Sbjct: 234 DQWLHLSKASGEYR 247


>gi|78065413|ref|YP_368182.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77966158|gb|ABB07538.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 259

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++  +      ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENSFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F P  Y      I      +   V+ L G  + V  G
Sbjct: 83  RKFDAINSAMNITSKR--RQSIDFTPAIYVVPIVMIAKHGSPLRPDVASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + ++  ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWATAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + + D      +     A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKNDKALQAKIVGALDAL 238


>gi|167567071|ref|ZP_02359987.1| glutamine ABC transporter periplasmic protein [Burkholderia
           oklahomensis EO147]
 gi|167574148|ref|ZP_02367022.1| glutamine ABC transporter periplasmic protein [Burkholderia
           oklahomensis C6786]
          Length = 250

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +++ + ++  +  S  A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTVVAVALVGASLASAQA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++          +  P++      ALQ++ ID+          R+    + F   
Sbjct: 53  DLWAEIAKDAGW---TYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERKK--AIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQTNNATIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA     +      + N+      +    +S         +G       
Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGTPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LAKMKADGRYAKIYKKWFGSEPP 248


>gi|93005157|ref|YP_579594.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
           K5]
 gi|92392835|gb|ABE74110.1| extracellular solute-binding protein, family 3 [Psychrobacter
           cryohalolentis K5]
          Length = 310

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 25/285 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL----GDIKKRGF---LKCGINTGLVGFAEVKAN 53
           M K           +   +   N+S                 +K    +    F+   A+
Sbjct: 9   MTKKALWLAPLSAAMLMLAGCNNSSTPTESTETAAATDTPLNIKIATESSYKPFSYTDAD 68

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G++++   AL + +      I     +       L +++ D        T  R+  
Sbjct: 69  GKLIGYEIELVDALCAQMKAKCEVIS---QDWDGLIPGLNAQKFDAAIAGMSITPERKEV 125

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    +  G   I  K   + SV  L G  I  Q  T     L D     +     
Sbjct: 126 --VEFSEPYFHSGIILIGKKGDDV-SVDALKGQPIASQRSTVASQYLQD----KHADADI 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232
            +++  +       + R  A   D         T       V   +I  +   +  A  +
Sbjct: 179 KLYDTQDNAYLDLTSGRVRAMMSDKVTGIDWLKTEAGKDYEVKGQEISTNDDAMGIAFRK 238

Query: 233 GDTEWYNIVSWT-------HYAMVTAEELGITQKNINQVSKDTTN 270
           GD                  Y  +T    G +     Q +  T++
Sbjct: 239 GDPLVAKFNKALAELKDNGTYDQITGSYFGTSSTTAAQKAVATSD 283


>gi|323353242|ref|ZP_08087775.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis VMC66]
 gi|322121188|gb|EFX92951.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis VMC66]
          Length = 287

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K   + S+  + +L   +    +S      ++  ++ G       F+    +G   G+D
Sbjct: 16  KKTLKYFSLAAVSVLAIGALVACSSSSNKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA+      D  ++ +        F  L S +  I + N       E +    +  
Sbjct: 76  IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178
               +    ++ K +GI S+  + G S  V  GT+T   L DY K H+     I +    
Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
           +++I A     R D    +        + +       ++     + P     I  G  + 
Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250

Query: 238 YNIVSW 243
              V+ 
Sbjct: 251 QKFVNK 256


>gi|108800000|ref|YP_640197.1| extracellular solute-binding protein [Mycobacterium sp. MCS]
 gi|119869125|ref|YP_939077.1| extracellular solute-binding protein [Mycobacterium sp. KMS]
 gi|108770419|gb|ABG09141.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. MCS]
 gi|119695214|gb|ABL92287.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 311

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 16/243 (6%)

Query: 24  ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A+ L   IK RG L  G+N           +G   GFDVD   A++S +        Y  
Sbjct: 61  ANTLPQPIKDRGSLIVGVNVPYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAE---YRE 117

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            + ++   ++Q    D+   +   T  RE    + F    +  G  +      GI   + 
Sbjct: 118 SDFEKIIPSIQGGTYDVGMSSFTDTKEREA--SVDFV-TYFSAGIQWAQKAGAGI-DPAN 173

Query: 143 LSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G  + VQ+ T  E             A       + F+  + +  A    + DA + D
Sbjct: 174 ACGKRVAVQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSAD 233

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                          +     +I   +P    + +G       +      ++        
Sbjct: 234 SPVTA--YAVKQSNGKLETAGEIFDAAPYGWPVAKGSP-LGQSLQQALEHLIETGAYEQI 290

Query: 258 QKN 260
            KN
Sbjct: 291 AKN 293


>gi|330812666|ref|YP_004357128.1| putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380774|gb|AEA72124.1| putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 285

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 73/242 (30%), Gaps = 24/242 (9%)

Query: 18  TSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           +S +   + L  ++++  L  G+       F+ +       GFDVD  +A++  +     
Sbjct: 29  SSQAFAGATLDRVEQKKEL-VGVLMESYPPFSFLNDQNQLDGFDVDVAKAVAQKLGVK-- 85

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKK 135
            ++    +         S + DI   +   +  R       F    Y       +  K  
Sbjct: 86  -LRLETPSWDVIAAGHWSGRYDICICSMTPSKARAEV--FDFPVQYYASPAVIVVNAKDD 142

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHN----------MKYHPIVFERVEEIDAA 185
            I     LSG  + + + ++ E  L                         ++        
Sbjct: 143 RIHGAKDLSGKKVGLTSASSYESYLNKNLVIEGAEDTQLSYPFEDVQIAPYDTDNVAFQD 202

Query: 186 YRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  R DA   +   L   +          +  +++   P + AI +GD +W N V 
Sbjct: 203 LGLGAGVRLDAVLTN---LVTAQPRLTEDKRFKLAGEVLYSEPNSVAIEKGDAQWDNKVR 259

Query: 243 WT 244
             
Sbjct: 260 EV 261


>gi|271500963|ref|YP_003333988.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Dickeya dadantii Ech586]
 gi|270344518|gb|ACZ77283.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Dickeya dadantii Ech586]
          Length = 248

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 12/212 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +T  V F   + +  + GFD+D   A++  +          P++      ALQ++
Sbjct: 27  LIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKQL---NLTYTLKPMDFSGIIPALQTR 82

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
            +D+       T  R+    + F    Y  G   ++    + I     L+G  + V++GT
Sbjct: 83  NVDLALAGITITEERK--HAIDFSDGYYNSGLLVMVRADNQDIKGEQDLAGKVVAVKSGT 140

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +     DY KA+        F  ++        +R DA   D   +     T       
Sbjct: 141 GSV----DYAKANIKTKELRQFPNIDNAYLELGTNRADAVLHDTPNILYFIKTAGNGK-F 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + D I       A  +G  +  N V+    
Sbjct: 196 KAVGDSIKAQQYGVAFPKGSDDLRNKVNAALK 227


>gi|167625394|ref|YP_001675688.1| extracellular solute-binding protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167355416|gb|ABZ78029.1| extracellular solute-binding protein family 3 [Shewanella
           halifaxensis HAW-EB4]
          Length = 245

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 80/249 (32%), Gaps = 26/249 (10%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG-DW 56
           M K   V  S+     L  T            K    L  G N     F  V  A+G + 
Sbjct: 1   MKKSVLVLASLGLTGALMLTGCG---------KSDDVLVVGTNASFPPFEYVGGASGDEI 51

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  R ++         ++   +N     +AL + ++D ++     T  R+ S+  
Sbjct: 52  MGFDIDLARQIAKDAGK---TLKVENMNFDSLIVALNAGKVDFIASGMTITPERQASVNF 108

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +  P         +      I+S+  L    I VQ G+T +        A +       F
Sbjct: 109 S-EPYYEATQMVLVNKDNNSINSLDDLKDKHIAVQLGSTGD------IMAKSYSQQVTAF 161

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E     +  + D    D           ++  +  ++    S      A+ +   E
Sbjct: 162 NSGFEAVMELKNAKVDLVLFD---SEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKVE 218

Query: 237 WYNIVSWTH 245
             N ++ + 
Sbjct: 219 LLNSINTSL 227


>gi|227812326|ref|YP_002812336.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae M66-2]
 gi|298499555|ref|ZP_07009361.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MAK 757]
 gi|227011468|gb|ACP07679.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio cholerae M66-2]
 gi|297541536|gb|EFH77587.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MAK 757]
          Length = 243

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 82/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++ L+     +                +K  +      F  +  N   +GFD
Sbjct: 1   MKKILLAYLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +    +K  +          AL+ K+ D      D T  R     + F  
Sbjct: 48  VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++  + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +          +    + + ++ +         A+ + + 
Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++    A+    E  
Sbjct: 215 ALLDQLNAALEAVKENGEYA 234


>gi|255327587|ref|ZP_05368653.1| L-cystine-binding protein TcyA [Rothia mucilaginosa ATCC 25296]
 gi|255295261|gb|EET74612.1| L-cystine-binding protein TcyA [Rothia mucilaginosa ATCC 25296]
          Length = 272

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 79/241 (32%), Gaps = 11/241 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             ++L       +S +++ + L  IK  G ++ G+      F+   +NG   GF+ +   
Sbjct: 19  LAALLAACGSSSSSTASSTNKLEAIKSAGKIRVGLEGTYRPFSFHDSNGALVGFEKEIID 78

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +        +           + + + DI+  N   T  R       F     + 
Sbjct: 79  LVAKDLGVTAE---FTETPWDSLIAGVDADRYDIVINNVSATDER--KQKYDFSVPYLYS 133

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                + K   + +VS++SG S      +          +A       +V    +E    
Sbjct: 134 EPKVAVKKDSSLQNVSEISGHSSAQSETS----NFRKMVEAKGAS--IVVVSGFDEAIEQ 187

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + R +    D  +       +   +  ++  D+ + S  +  + +G     N +  + 
Sbjct: 188 VLSGRAEMTANDSVSFAEYFKEHPDANLRLLSGDLGTGSNSSILLPKGQDALRNAIDESL 247

Query: 246 Y 246
            
Sbjct: 248 K 248


>gi|205375464|ref|ZP_03228252.1| amino acid ABC transporter ATP-binding protein [Bacillus
           coahuilensis m4-4]
          Length = 259

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 81/247 (32%), Gaps = 17/247 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   ++IL  I++   +  +    S    + +        +     F+     G   G
Sbjct: 1   MKKKVMLTILLAIMMSLAACGSQETNSTGMKLVEEERFTYAASGEFAPFSVTNGEGQMTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD++   A++  +  +P + +Y           +++ + D    +      R     + F
Sbjct: 61  FDIEVAEAVADVLGLNPVQEKYK---FSGIVEGVKAGKFDAAVASHTINEER--LEQVDF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y+ G    +     + ++  L G  I V  G+T E +      A  +  +   ++ 
Sbjct: 116 STPYYYSGPQIFVRPDSDVQTLEDLEGLEIAVSKGSTYEES------AVTVTENIKRYDS 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 A    + DA   D                 +   +++ +S  A A+ + + E  
Sbjct: 170 DVVALEALSKGKHDAVITDFITGKEAIAN----GLTIEARELLGRSEQAIAVSKENKELL 225

Query: 239 NIVSWTH 245
             ++   
Sbjct: 226 EKINEAL 232


>gi|126444587|ref|YP_001064263.1| glutamine ABC transporter periplasmic protein [Burkholderia
           pseudomallei 668]
 gi|126224078|gb|ABN87583.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 668]
          Length = 250

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 93/283 (32%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +I+ L ++  +    +A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTIVALALVGASVAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++          +  P++      ALQ++ ID+          R     + F   
Sbjct: 53  DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA     +      + N+      +    +S         +G       
Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248


>gi|307545356|ref|YP_003897835.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307217380|emb|CBV42650.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 262

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M +    +I   I     +                L+ GI+      F    + G+W GF
Sbjct: 7   MQRALIPAIALSIATLGGAAQAAEP----------LQIGISAEPYPPFTYTSSEGEWTGF 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+   A+  A+    ++ +  P        +L++ +ID++  +   T  R+    + F 
Sbjct: 57  EVELGLAICEAM---EAECEIQPTGWSGIIPSLKAGRIDMIMNSMSITEARQKV--IDFS 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              YF    ++      +S    L G  + VQ+ TT         +   +      +++ 
Sbjct: 112 DPYYFTPGAYVAADDLELSLPEGLDGLVLGVQSATTNATYARRALRDTGVDTRL--YDQA 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+++    + R D    D  A+  L    D      I             +  G  +  +
Sbjct: 170 EQVNRDLLSGRLDVILADEIAMNELVER-DEAEGFEIKGTAPHHEAYGEGVGIGIRQGDS 228

Query: 240 IVSWTHYAMVT 250
            +     A + 
Sbjct: 229 ELKANLNAAIE 239


>gi|296328660|ref|ZP_06871177.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154259|gb|EFG95060.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 242

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 85/256 (33%), Gaps = 23/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++ L+ +  +             K   +  G N     F  +       GFD
Sbjct: 1   MKKFVKLMLMSLLSVVISISVFA--------KSNVVYVGTNAEFAPFEYLD-KNKIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K++D++      T  R+ ++   F  
Sbjct: 52  IDLLDAISKETG---LEFRIQDMAFDGLLPALQTKKVDMVIAGMTATPERQKTVA--FSK 106

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  I   + K + S   LSG  + V  G T +  +++             F   
Sbjct: 107 PYFKAKQVVITKGENKSLKSFKDLSGKKVGVMLGFTGDAVVSEI-----KGVKIERFNAA 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ DA   D     A K T +   + VI      +   A A  + D E  N
Sbjct: 162 YAAILALSQNKIDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218

Query: 240 IVSWTHYAMVTAEELG 255
            V+     +    E  
Sbjct: 219 KVNVALDKIKANGEYD 234


>gi|25028401|ref|NP_738455.1| glutamate-binding protein GluB [Corynebacterium efficiens YS-314]
 gi|24636878|sp|Q8RQL6|GLUB_COREF RecName: Full=Glutamate-binding protein; Flags: Precursor
 gi|20126698|dbj|BAB88899.1| gluB [Corynebacterium efficiens]
 gi|23493686|dbj|BAC18655.1| glutamate-binding protein GluB [Corynebacterium efficiens YS-314]
          Length = 294

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68
           I L     S     L    + G +  G      G      +    G DVD  +     ++
Sbjct: 22  ITLTACGDSEGGDGLLAAIENGNVTIGTKYDQPGLGLRNPDNSMSGLDVDVAQYVVNSIA 81

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                D   +++    + +R   +Q+ ++D+++        R  S  + F        Q 
Sbjct: 82  DDNGWDHPTVEWRETPSAQRETLIQNGEVDMIAATYSINPGR--SESVNFGGPYLLTHQA 139

Query: 129 FIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            ++      I ++  L  G  +C   G+T    + D             ++       A 
Sbjct: 140 LLVREDDDRIQTLEDLDDGLILCSVTGSTPAQKVKDVLP----GVQLQEYDTYSSCVEAL 195

Query: 187 RAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                DA T D + L+      +      E     +  +       I + DTE  + ++ 
Sbjct: 196 SQGNVDAMTTDATILFGYAQQREGEFRVVEMEQDGEPFTNEYYGIGITKDDTEATDAINA 255

Query: 244 TH 245
             
Sbjct: 256 AL 257


>gi|149191457|ref|ZP_01869707.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio shilonii AK1]
 gi|148834726|gb|EDL51713.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Vibrio shilonii AK1]
          Length = 243

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S++ L      +                +K  +      F  V  N   +GFD
Sbjct: 1   MKKMLLASLIGLASYGAMAQQ-------------EIKFAMEATYAPFEYVDENNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   I    +K  +          AL+ K+ D      D T  R     ++F  
Sbjct: 48  VDLANALCKQI---EAKCSFHNQAFDSLIPALKFKRYDAAISGIDITEAR--QQQVSFTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+      ++S + L G  + VQ G+T +  L +           + +   +
Sbjct: 103 AYYDNSAAFVAMTG-KVASQAALEGKRVGVQNGSTHQSYLLEQMP----GVTAVPYGSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D+  GD + +        +  +   + D I+           A+ + + 
Sbjct: 158 DAFIDMQNGRIDSVFGDTAVVAEW---FKKDDKLAYVGDQITNQKYFGNGFGIAVNKDNQ 214

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              + ++     +    E  
Sbjct: 215 ALVDQLNTALKTVKENGEYQ 234


>gi|307130610|ref|YP_003882626.1| glutamine ABC transporter periplasmic binding protein [Dickeya
           dadantii 3937]
 gi|306528139|gb|ADM98069.1| glutamine transporter subunit; periplasmic binding component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 248

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 75/212 (35%), Gaps = 12/212 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +T  V F   + +  + GFD+D   A++  +  +       P++      ALQ++
Sbjct: 27  LLVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKQLNLNY---TLKPMDFSGIIPALQTR 82

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
            +D+       T  R+    + F    Y  G   ++    + I     L+G  + V++GT
Sbjct: 83  NVDLALAGITITEERKR--AIDFSDGYYNSGLLVMVRADNQDIKGEQDLAGKVVAVKSGT 140

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +     DY KA+        F  ++        +R DA   D   +     T       
Sbjct: 141 GSV----DYAKANIKTKELRQFPNIDNAYLELGTNRADAVLHDTPNILYFIKTAGNGK-F 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + + I       A  +G  E  N V+    
Sbjct: 196 KTVGESIKAQQYGVAFPKGSDELRNKVNGALK 227


>gi|172064456|ref|YP_001812107.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171996973|gb|ACB67891.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 267

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + +          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLVVSALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRDAICEQL---RAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + + + L+G  + +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++   +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIAAI 238


>gi|319942011|ref|ZP_08016330.1| hypothetical protein HMPREF9464_01549 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804395|gb|EFW01273.1| hypothetical protein HMPREF9464_01549 [Sutterella wadsworthensis
           3_1_45B]
          Length = 276

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 64/220 (29%), Gaps = 13/220 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L DIK RG L  G       +      G   G+DV+  RA++  +  +    +++     
Sbjct: 45  LDDIKARGVLTIGTEGVYAPYTYHDEKGRLTGYDVEVGRAIAKKLGVEA---KFVETPWD 101

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145
                + +K+ DI        L  E      F           ++      I     L G
Sbjct: 102 ALIAGIDAKRYDIGINQIG--LSPERLAKYDFTKPYVSIKGVLLVRSDNEKIKGFEDLKG 159

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             +  Q  T+    +A    A       +  +   +        R DA      A    +
Sbjct: 160 VRMA-QTITSNWGKIAVNAGA-----EIVGVQDFAQSVQLIAQRRADAVVNSELAWVDYR 213

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    V+         +A  + +G+ +    ++   
Sbjct: 214 KAQPNVPVKVVATTKEGID-VAIPVRKGNPKLLAALNQAL 252


>gi|167589672|ref|ZP_02382060.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 246

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 11/219 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I K G L+  +      F  V  +   +G+D+D    L+ A+      ++ +P+N+ 
Sbjct: 14  LDTIAKNGALRVAVPEDYPPFGSVGTDMQPQGYDIDMAGVLAKALGVK---LKLVPVNSA 70

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   L + ++D++  +   T  RE    + F        QG        +S+   L+G 
Sbjct: 71  NRIPYLTTNKVDMVISSLGKTPEREKV--IDFSTAYAPYFQGVFGPADVKVSAPDDLTGK 128

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           ++    G   E+ L+              F+       A+ + +            A+  
Sbjct: 129 TVGATRGALEEIALSQLAP----NATIKRFDDNNATIQAFLSGQVQLIAAGNIVAAAILA 184

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               P     +  +I  SP    + + +      +    
Sbjct: 185 --KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAKIDDAI 221


>gi|118431638|ref|NP_148244.2| ABC transporter, substrate binding protein [Aeropyrum pernix K1]
 gi|116062962|dbj|BAA80898.2| ABC transporter, substrate binding protein [Aeropyrum pernix K1]
          Length = 283

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 88/240 (36%), Gaps = 15/240 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S    +L +IK+RG LK G +     +  +   G + G D++  + ++  +     +++
Sbjct: 41  CSVGYGLLDNIKERGVLKVGTSADWPPYEYIDPQGGYAGIDIELAKKIADGLG---VQLE 97

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK---KKG 136
            + +     F A+QS ++DI+  +      R     + F      +    I+ K     G
Sbjct: 98  IVDMKFAALFQAVQSGKVDIVIADVAMKPER--LEAVDFTIPYRCETGKAIIVKAEDASG 155

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYT 195
            +    L+G  I VQ+ T  E     YF     K   + ++R   E+  A +  + DA  
Sbjct: 156 YTGFDWLAGKKIGVQSATVEEELANKYF---GDKAEIVTYDRVYPEMTIALKTGKIDAMV 212

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   +    +       +P     +     +     E    VS   + ++ + EL 
Sbjct: 213 AAPDVARLIVTAEEGLVIVDQIPYFGCST---VVVPHCAFELKKEVSSIIWDLIQSGELQ 269


>gi|57167746|ref|ZP_00366886.1| histidine-binding protein precursor [Campylobacter coli RM2228]
 gi|305433251|ref|ZP_07402407.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter coli JV20]
 gi|2500690|sp|Q46125|HISJ_CAMJE RecName: Full=Histidine-binding protein; Short=HBP; AltName:
           Full=p29; Flags: Precursor
 gi|1477741|gb|AAC35419.1| histidine periplasmic binding protein P29 [Campylobacter coli]
 gi|1813951|emb|CAA71823.1| CjaC [Campylobacter jejuni]
 gi|57020868|gb|EAL57532.1| histidine-binding protein precursor [Campylobacter coli RM2228]
 gi|304443952|gb|EFM36609.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter coli JV20]
          Length = 256

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 72/240 (30%), Gaps = 17/240 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K     ++    LF  +     T  +   +      LK G       F   + +    
Sbjct: 1   MKKFLTAFLVAFTGLFLVACQNTKTENNASNEANTTLTLKVGTAPNYKPFNFKQDS-KLT 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD D    ++     +  +I ++  N      AL+S +ID+++     T  R     + 
Sbjct: 60  GFDTDLIEEIAKK---NGIEIVWVETNFDGLIPALKSGKIDMIASAMSATDER--RQSVD 114

Query: 118 FR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F  P          +     + + + L G  I VQ GT     L +              
Sbjct: 115 FTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSN 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           + +     A + ++ DA   D           + P       +       + A  +   +
Sbjct: 170 KDLNIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 227


>gi|319944974|ref|ZP_08019236.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
 gi|319741544|gb|EFV93969.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lautropia mirabilis ATCC 51599]
          Length = 280

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 93/271 (34%), Gaps = 20/271 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           +   S+L  + +   +    A    DI+K G L       L  F   +      GF+V+ 
Sbjct: 27  NLLRSVLAGVCVALAASGVQARSWADIEKSGTLIAATGGDLKPFNYFEGK-QLTGFEVEL 85

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A++  +     K+++  L+       LQ  + D+   +   T  R     + F    Y
Sbjct: 86  TDAIARKLG---LKVEWKVLSFDSLLAGLQRDRWDLAISSHGITEERAKV--VDFTNPHY 140

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G   +  K   ++  + L+G ++ VQ GTT    L       +       F    +  
Sbjct: 141 CGGATIVS-KDGKVAKAADLAGKTVAVQTGTTYLERLRKM----DGIGSVRNFPLDRDAR 195

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AA  + R DA+  D                     +I+    +A A+ +G+TE       
Sbjct: 196 AATVSGRADAWVTDKFVAMEAIKLVPDSGLKQ--GEILFPERMAGAMSKGNTEL------ 247

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              A        +      ++SK   + D++
Sbjct: 248 -VKAFNKGLAEVMVDGTYEKLSKKYFDQDIR 277


>gi|217424367|ref|ZP_03455866.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 576]
 gi|217392832|gb|EEC32855.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia pseudomallei 576]
          Length = 250

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 95/283 (33%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +I+ L ++  ++   +A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++          +  P++      ALQ++ ID+       T   E    + F   
Sbjct: 53  DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGM--TNKEERRKAIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA     +      + N+      +    +S         +G       
Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248


>gi|34498424|ref|NP_902639.1| amino acid ABC transporter, periplasmic-binding protein
           [Chromobacterium violaceum ATCC 12472]
 gi|34104278|gb|AAQ60637.1| amino acid ABC transporter, periplasmic-binding protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 263

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 14/240 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           ++  +++L              I+K G L  G+      ++++ A G  +GF+VDF RAL
Sbjct: 10  ALCVVMLLSLAPAQGGGDEWARIRKDGALLIGLEGTFPPYSQL-AGGQLQGFEVDFGRAL 68

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +       ++  +       +L + ++D +      T  R       F     + G 
Sbjct: 69  AAQMGVTA---RFQTMVWDHMLDSLAAGRLDAVINQVVATPAR--GKRFDFSIPYTYSGL 123

Query: 128 GFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             ++ K           L+GA + V AGT  E  L D         H  +++        
Sbjct: 124 QLVVRKPDLTRFRGARDLAGAHVGVSAGTNYEQWLRDNAPQA----HIHLYQDDPTKFDG 179

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R    DA   +   L A  L      E V    ++++      + +G+      V+   
Sbjct: 180 LRRGEVDAIVINR--LAAFNLALKSQGELVPTGRVLAREDACVVLRKGNPRLLAEVNRAI 237


>gi|329577884|gb|EGG59305.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 487

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 15/234 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T  + N  +   I ++G L  G++     +     V       GFD+   + ++  +   
Sbjct: 27  TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++   L       AL++ +ID++      T  R   +   F        Q  I+ K+
Sbjct: 87  ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                 S     G     Q  TT E  +        +   P   +++ ++    + ++ D
Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----IGAVPTSLQKIPDLIMNLKNNKLD 197

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A   +     A    N+  +   +  +  SK   A A  +        V+ +  
Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFANVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250


>gi|289667487|ref|ZP_06488562.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 257

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 82/252 (32%), Gaps = 6/252 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + + +  ++       +  AS L  + + G L+         ++ ++ +G ++G D+D 
Sbjct: 2   RYRICLALVLSCGMAHAAAPASRLDVVLQSGVLRVCTTGDYRPYSLLREDGQFEGSDIDL 61

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            ++L++++    ++++++  +  +    L +++ DI       TL R+     +      
Sbjct: 62  AQSLATSLG---ARVRFVRTSWPQLMPDLLAERCDIAVGGISVTLQRQRQASFSAVLDVD 118

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                     +    S+ QL+   + V            + +    + +  +F     I 
Sbjct: 119 GKIPLVRCADQARYRSMEQLNRPQVRVIEPPGGTN--EAFARCELPRANVRLFADNTTIF 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R D    D S     +              +      A  + + D  W   V  
Sbjct: 177 EELLEQRADVMITDASEALYQQARLPGLCAIAPEHPLQYSE-KAFLLPRDDQAWKAYVDQ 235

Query: 244 THYAMVTAEELG 255
             +    + E  
Sbjct: 236 WLHLSKASGEYR 247


>gi|226357683|ref|YP_002787422.1| amino acid ABC transporter, periplasmic component [Deinococcus
           deserti VCD115]
 gi|226319925|gb|ACO47918.1| putative amino acid ABC transporter, periplasmic component
           [Deinococcus deserti VCD115]
          Length = 254

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 15/243 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
               L   +      +  A  L DIK  G LK   +     F  +   G  KGF+VD   
Sbjct: 3   LKISLLAGLALMVGSAAQARTLSDIKASGVLKVATSADFEPFNYM-KGGVAKGFEVDLAE 61

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFRPITY 123
            ++  +     +I+++          +  +  +ID++  +      R  +  + F    Y
Sbjct: 62  QVARQMG---LRIEWVVRPFDGLLKEVNDRPKEIDVVIASHAINSTRAKT--VEFASPHY 116

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G   +  K   + +   L+G  +  +AG+T    L    +         V+     + 
Sbjct: 117 CTGGVILTRKGGPL-TTKALAGKKLGAEAGSTYFSFL----RKLPFDKSVQVYNSSLAVT 171

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A    +  A   D     A++     P   ++L + + K  +A A  +G+TE    V+ 
Sbjct: 172 TAVATGQVAAIVTDR--FAAIEAQKTFPKAGLVLGETLWKEQIAMAFAKGNTELKTAVNA 229

Query: 244 THY 246
             +
Sbjct: 230 ALH 232


>gi|90961557|ref|YP_535473.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
 gi|90820751|gb|ABD99390.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
          Length = 485

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 13/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +   ++F + F    S+  D K         +     F     +  + G D
Sbjct: 1   MKKFITFLSIISSLIFLSFFVKPQSVHADEK---TYTIATDVTFPPFEYADDSNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++     +  K+   P+       ++ + Q+D +      T  R+      F  
Sbjct: 58  IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    +     I S+ QL G  + ++ GT+           +  K   + F+  +
Sbjct: 113 PYYSSGIVMAVKPDSSIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +    +     A   D      L+          I+    +      A+ +G  +
Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGNFGFAVKKGTHQ 223


>gi|58336481|ref|YP_193066.1| glutamine ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227903033|ref|ZP_04020838.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus acidophilus ATCC 4796]
 gi|58253798|gb|AAV42035.1| glutamine ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227869207|gb|EEJ76628.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus acidophilus ATCC 4796]
          Length = 491

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 85/262 (32%), Gaps = 26/262 (9%)

Query: 1   MYK--DFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAE- 49
           M K    F++ + LI   F    +        + +++  IK+   L  G +         
Sbjct: 1   MKKAKIIFLAFITLISTLFLFNQSVSAAKKVEDGTVMKKIKQSKELVVGTSADYPPLEFT 60

Query: 50  --VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             V  N  + G D++  + ++  +    +K+    ++     +AL++ ++D++       
Sbjct: 61  TSVGGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAMTPN 117

Query: 108 LLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             R+    + F  I Y             +     +   +G ++  Q G+     +    
Sbjct: 118 PERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKIKDFAGQTVGAQTGSIQYQLIQSQM 175

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           K    K       ++  +  A ++ +      +          ND     V       ++
Sbjct: 176 KKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTAKAYAKNDNSLMAVRSDLREEQA 230

Query: 225 PLAPAIIQGDTEWYNIVSWTHY 246
             A A+ +G       V+ T  
Sbjct: 231 GNAVAVAKGQPGLIRAVNKTIN 252


>gi|172060122|ref|YP_001807774.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171992639|gb|ACB63558.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 264

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 13/221 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---NVKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G+  +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211
           GT  E      +         + ++  +   A  ++ R DA +    +            
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202

Query: 212 SEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
                   +     L       + + D      +      +
Sbjct: 203 GFGFAGGTVADAEILGSGVGFGLRKNDAALKTALDQALKGL 243


>gi|257889501|ref|ZP_05669154.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium 1,231,410]
 gi|257825861|gb|EEV52487.1| extracellular solute-binding protein, family 3 [Enterococcus
           faecium 1,231,410]
          Length = 232

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 12/215 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K    +++       ++  T A     +   +++K+  L    +  L   +      +
Sbjct: 1   MKKKRLFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD  + ++  +     KI +   N   +  ++  ++ D  + +   T  RE    
Sbjct: 61  LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKRESDFAANDFGITKEREKKFS 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L+      FD          GI S+  L G     +  T+         + H  K     
Sbjct: 118 LSETFKYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               ++  +     R D    D             
Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPD 208


>gi|104782884|ref|YP_609382.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas
           entomophila L48]
 gi|95111871|emb|CAK16595.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas
           entomophila L48]
          Length = 248

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 13/219 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK GI      FA  + +G   GFD D   AL   +    +K  ++         AL+ +
Sbjct: 13  LKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEM---KAKCTWVEQEFDGLIPALKVR 69

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+    + F    Y      +M +   +  S+ +L G  I VQ G+
Sbjct: 70  KIDAILSSMSITDDRKK--SVDFSKRYYLTPARLVMKEGTTVSESLDELKGKKIGVQRGS 127

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             +    +           + +    EI     A R D    D + L    L  D     
Sbjct: 128 IHDRFAKEVLAPKG--ATVVPYGTQNEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGF 185

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
             +    +           A+ +GD E  + ++    A+
Sbjct: 186 AFVGPSFTDVKYFGDGVGIAVRKGDKENADRINAAIDAI 224


>gi|300715981|ref|YP_003740784.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae
           Eb661]
 gi|299061817|emb|CAX58933.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae
           Eb661]
          Length = 273

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 84/256 (32%), Gaps = 15/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K    ++   ++L   S +  A +   +K +G L   I                  G 
Sbjct: 1   MKKIVLTAVAAAVLL--NSAAWAAELPAALKAKGALTVAIMPNYPPMEFKDPATNTLTGV 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+   +      I +  +  ++   A+ +K++D++      T  R+    ++F 
Sbjct: 59  DVDLGNAIGEKLGVK---INWQEIAFEQMVNAVSTKRVDMVMSGMTDTAERQKV--VSFI 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174
                  Q + +  +K I+S + L G  +     TT    +A + +A+           +
Sbjct: 114 DYFTTGPQFYTLAARKDINSATDLCGKKVGTSRRTTFPQEIAKWSQANCEAKGKPAIVVV 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   +     R  R D        L  +         +  L   I+      AI + D
Sbjct: 174 GAEGTADARTQLRQRRLDGAVQGSETLPYVMNLEKN--TYKPLDKAIASQFTGMAIDKND 231

Query: 235 TEWYNIVSWTHYAMVT 250
                 V     AM+ 
Sbjct: 232 PALIAAVQGAVNAMIA 247


>gi|256957248|ref|ZP_05561419.1| amino acid ABC transporter [Enterococcus faecalis DS5]
 gi|257077778|ref|ZP_05572139.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           faecalis JH1]
 gi|294781304|ref|ZP_06746650.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|307267969|ref|ZP_07549357.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|256947744|gb|EEU64376.1| amino acid ABC transporter [Enterococcus faecalis DS5]
 gi|256985808|gb|EEU73110.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           faecalis JH1]
 gi|294451640|gb|EFG20096.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|306515610|gb|EFM84137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|315032477|gb|EFT44409.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034288|gb|EFT46220.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|323480074|gb|ADX79513.1| his/Glu/Gln/Arg/opine amino ABC transporter [Enterococcus faecalis
           62]
          Length = 487

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T  + N  +   I ++G L  G++     +     V       GFD+   + ++  +   
Sbjct: 27  TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++   L       AL++ +ID++      T  R   +   F        Q  I+ K+
Sbjct: 87  ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                 S     G     Q  TT E  +            P   +++ ++    + ++ D
Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A   +     A    N+  +   +  +  SK   A A  +        V+ +  
Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFANVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250


>gi|91226242|ref|ZP_01261082.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio alginolyticus 12G01]
 gi|269965301|ref|ZP_06179422.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio alginolyticus 40B]
 gi|91189253|gb|EAS75532.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio alginolyticus 12G01]
 gi|269830102|gb|EEZ84330.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio alginolyticus 40B]
          Length = 258

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K   V  L + +L  T  +   S L  I   G L+ G                 ++GF
Sbjct: 1   MRKILLV--LGMCLLAATQVAHAESRLQSILDNGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+P + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVPTDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
                             S  +  +   + V A   T  E  + ++F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFNKPEVKVAATLGTVQEKMVKEFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V +      +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVDKFKQ-LAIVPVTAPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|83717600|ref|YP_440544.1| glutamine ABC transporter periplasmic protein [Burkholderia
           thailandensis E264]
 gi|167579227|ref|ZP_02372101.1| glutamine ABC transporter periplasmic protein [Burkholderia
           thailandensis TXDOH]
 gi|167617348|ref|ZP_02385979.1| glutamine ABC transporter periplasmic protein [Burkholderia
           thailandensis Bt4]
 gi|257141205|ref|ZP_05589467.1| glutamine ABC transporter periplasmic protein [Burkholderia
           thailandensis E264]
 gi|83651425|gb|ABC35489.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia thailandensis E264]
          Length = 253

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 95/284 (33%), Gaps = 35/284 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+     + L   SF++ AS          L  G +T  + F   + +  + GFD
Sbjct: 1   MGRRSFIKTFVAVALAGASFASLASAHAK-----ELIVGTDTSFMPFEFKQGD-KYVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++          +  P++      ALQ++ ID+          R+    + F  
Sbjct: 55  LDLWAEIAKDAGW---TYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERKK--AIDFSD 109

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  +
Sbjct: 110 PYYDSGLAAMVQTNDATIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++   A  A R DA     +      + N+      +    +S         +G      
Sbjct: 166 DQAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGTPVSGDKYGIGFPKGSP---- 220

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                  A V AE        + ++  D     + +++ G +  
Sbjct: 221 -----LVAKVNAE--------LAKMKADGRYAKIYKKWFGSEPP 251


>gi|332040175|gb|EGI76556.1| extracellular solute-binding protein family 3 [Hylemonella gracilis
           ATCC 19624]
          Length = 298

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 9/232 (3%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
           F +++    +   +   + +    IK+ G L+ G       F+ +   +G  +GFD    
Sbjct: 32  FDALIAQGPVASAATIRSNAWASKIKQAGTLRLGGLQTSNLFSLLNEKDGKTRGFDAGLA 91

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  I  D +K+Q+  + +  R   L + Q+D++      T  R  +  ++F    Y 
Sbjct: 92  QLITRYILGDGAKVQFTQVTSSTREQVLINDQVDMVIATYSITPAR--TEKISFAGPYYS 149

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              G ++      I S + L+G  +  QAG+T    LA Y            F+  +E  
Sbjct: 150 SQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPTILAQYAPKG----VVQEFQTHQEAL 205

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            A R  R DAY  D + L    L+       +      ++      + +G  
Sbjct: 206 DALRQGRVDAYVTDYTLLL-NALSLGTGDAKLAGAPFGAQDSYGVGLPKGSD 256


>gi|259507458|ref|ZP_05750358.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Corynebacterium efficiens YS-314]
 gi|259164946|gb|EEW49500.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Corynebacterium efficiens YS-314]
          Length = 289

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68
           I L     S     L    + G +  G      G      +    G DVD  +     ++
Sbjct: 17  ITLTACGDSEGGDGLLAAIENGNVTIGTKYDQPGLGLRNPDNSMSGLDVDVAQYVVNSIA 76

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                D   +++    + +R   +Q+ ++D+++        R  S  + F        Q 
Sbjct: 77  DDNGWDHPTVEWRETPSAQRETLIQNGEVDMIAATYSINPGR--SESVNFGGPYLLTHQA 134

Query: 129 FIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            ++      I ++  L  G  +C   G+T    + D             ++       A 
Sbjct: 135 LLVREDDDRIQTLEDLDDGLILCSVTGSTPAQKVKDVLP----GVQLQEYDTYSSCVEAL 190

Query: 187 RAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                DA T D + L+      +      E     +  +       I + DTE  + ++ 
Sbjct: 191 SQGNVDAMTTDATILFGYAQQREGEFRVVEMEQDGEPFTNEYYGIGITKDDTEATDAINA 250

Query: 244 TH 245
             
Sbjct: 251 AL 252


>gi|227823074|ref|YP_002827046.1| putative solute-binding component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342075|gb|ACP26293.1| putative solute-binding component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 264

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 11/256 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                    ++L   +    A  + DIK  G +  GI +    F+   A+   KG+DVD 
Sbjct: 6   KLKAMFTAALMLGAATGMARADAVDDIKAAGQINVGIFSDFPPFSSASADMSIKGYDVDV 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + ++ A+     ++  + +  + R   L  K++DIL         +E +  + F     
Sbjct: 66  AQQIADALG---VRLNLVSVTGQNRIPYLNDKRVDIL---MSVGYSKERAEVIDFAAAYA 119

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                 I   +  ++    L+  +I V  GT  + +L +   A         F+    + 
Sbjct: 120 PYYIAVIGPAELKVAGKEDLADKTIAVNRGTLEDTSLTEAAPA---SASIQRFDNYNAVI 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A+ + +             +    +          + S S +   + + +      V+ 
Sbjct: 177 QAFISGQTQLMVVGNDVGAQVLARQEALKPEQKFQLLTSPSHIG--LNKNEERLKQSVND 234

Query: 244 THYAMVTAEELGITQK 259
           T   M+   +L  + +
Sbjct: 235 TVAKMLADGKLNESSQ 250


>gi|163800523|ref|ZP_02194424.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
 gi|159175966|gb|EDP60760.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
          Length = 272

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 11/251 (4%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L + I   +  +  A+   +  IK+RG L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKTTITALLGIAIALPSLANEKAATPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L++       K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAADSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F       G     + K            S  V+             +    K   + F
Sbjct: 115 LFTEPYSHSGVQVAANTKLAEGFSEFSDFNSRRVKIAVRRGAYTVQVARETFPKAKLLQF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +           A            + +          + +SK   A A+  G+ +
Sbjct: 175 DDDAQAFQEVLNGNAHAVIASSPKPEHESIKHADKL-FTPFSERLSKGNEAFAVRLGEED 233

Query: 237 WYNIVSWTHYA 247
                +    A
Sbjct: 234 KKAFFNQWIAA 244


>gi|186472109|ref|YP_001859451.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184194441|gb|ACC72405.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 269

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 11/224 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +A  L  I K G ++ G+      F  +  +   +G+D++    +  ++      ++ +
Sbjct: 32  AHADALDTITKAGVVRVGVFMDYPPFGSIGPDMKPQGYDIEVANLIGKSLGVK---VELV 88

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            +    R   L   + D+L      T  RE    + F              K   +   +
Sbjct: 89  AVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSQPYAPYYLAVFGPKSLKVKDAN 145

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G SI V  GT  +L++           +   F+      +A+ + +           
Sbjct: 146 DLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAFLSGQVQLMVVGNDVG 202

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +      P+        +  SP    + + +      V  T 
Sbjct: 203 ATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLLKKVDDTI 244


>gi|229551204|ref|ZP_04439929.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315496|gb|EEN81469.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 498

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 26/318 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + +   +  +  L  T        +     +     G +     F     +  + G D
Sbjct: 13  MKRVWKWCVAGVAALILTLSMAMP--VSTHAAKKTYVIGTDVTYAPFEFADKHNQYVGID 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +  ++   PL       AL++ QID +      T  R+    +    
Sbjct: 71  IDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--SD 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       + K  G++ +  L G  + ++ GT                +  + F+   
Sbjct: 126 PYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDSN 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236
            +          A   D   L     T     +  +       S    A  +G ++    
Sbjct: 184 NMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELDQ 240

Query: 237 -----WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
                   + +   YA + A+ LG   +   + +   T    + FLG+ + +      GL
Sbjct: 241 KFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNGL 300

Query: 292 TKDWTYRIIR-----HMG 304
            +     I+       +G
Sbjct: 301 RETMVVTIVAIFFATAVG 318


>gi|258541041|ref|YP_003175540.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152717|emb|CAR91689.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 486

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 26/318 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + +   +  +  L  T        +     +     G +     F     +  + G D
Sbjct: 1   MKRVWKWCVAGVAALILTLSMAMP--VSTHAAKKTYVIGTDVTYAPFEFADKHNQYVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +  ++   PL       AL++ QID +      T  R+    +    
Sbjct: 59  IDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--SD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       + K  G++ +  L G  + ++ GT                +  + F+   
Sbjct: 114 PYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDSN 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236
            +          A   D   L     T     +  +       S    A  +G ++    
Sbjct: 172 NMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELDQ 228

Query: 237 -----WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
                   + +   YA + A+ LG   +   + +   T    + FLG+ + +      GL
Sbjct: 229 KFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNGL 288

Query: 292 TKDWTYRIIR-----HMG 304
            +     I+       +G
Sbjct: 289 RETMVVTIVAIFFATAVG 306


>gi|227517812|ref|ZP_03947861.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229546739|ref|ZP_04435464.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229548830|ref|ZP_04437555.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|255971345|ref|ZP_05421931.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|256617763|ref|ZP_05474609.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200]
 gi|256761649|ref|ZP_05502229.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256854261|ref|ZP_05559625.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256960019|ref|ZP_05564190.1| arpJ [Enterococcus faecalis Merz96]
 gi|256964286|ref|ZP_05568457.1| arpJ [Enterococcus faecalis HIP11704]
 gi|257081138|ref|ZP_05575499.1| amino acid-binding/permease [Enterococcus faecalis E1Sol]
 gi|257083807|ref|ZP_05578168.1| amino acid ABC transporter [Enterococcus faecalis Fly1]
 gi|257089304|ref|ZP_05583665.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257415457|ref|ZP_05592451.1| arpJ [Enterococcus faecalis AR01/DG]
 gi|257421139|ref|ZP_05598129.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293383772|ref|ZP_06629679.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|293388752|ref|ZP_06633245.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|300860123|ref|ZP_07106211.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307271893|ref|ZP_07553161.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307275311|ref|ZP_07556454.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307290910|ref|ZP_07570800.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312901565|ref|ZP_07760838.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904453|ref|ZP_07763612.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312907012|ref|ZP_07766008.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312952839|ref|ZP_07771701.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|312978730|ref|ZP_07790457.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|227074736|gb|EEI12699.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229306059|gb|EEN72055.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229308088|gb|EEN74075.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|255962363|gb|EET94839.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|256597290|gb|EEU16466.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200]
 gi|256682900|gb|EEU22595.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256709821|gb|EEU24865.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256950515|gb|EEU67147.1| arpJ [Enterococcus faecalis Merz96]
 gi|256954782|gb|EEU71414.1| arpJ [Enterococcus faecalis HIP11704]
 gi|256989168|gb|EEU76470.1| amino acid-binding/permease [Enterococcus faecalis E1Sol]
 gi|256991837|gb|EEU79139.1| amino acid ABC transporter [Enterococcus faecalis Fly1]
 gi|256998116|gb|EEU84636.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257157285|gb|EEU87245.1| arpJ [Enterococcus faecalis ARO1/DG]
 gi|257162963|gb|EEU92923.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291078848|gb|EFE16212.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|291081909|gb|EFE18872.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|295113911|emb|CBL32548.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300850941|gb|EFK78690.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306497980|gb|EFM67507.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306507945|gb|EFM77072.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511399|gb|EFM80401.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|310626997|gb|EFQ10280.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310629355|gb|EFQ12638.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632151|gb|EFQ15434.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311288437|gb|EFQ66993.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311291360|gb|EFQ69916.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315029764|gb|EFT41696.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315148051|gb|EFT92067.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315149654|gb|EFT93670.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315152966|gb|EFT96982.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315155197|gb|EFT99213.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315157525|gb|EFU01542.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315163047|gb|EFU07064.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315171996|gb|EFU16013.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315174863|gb|EFU18880.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315577324|gb|EFU89515.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|327534474|gb|AEA93308.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 487

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T  + N  +   I ++G L  G++     +     V       GFD+   + ++  +   
Sbjct: 27  TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++   L       AL++ +ID++      T  R   +   F        Q  I+ K+
Sbjct: 87  ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                 S     G     Q  TT E  +            P   +++ ++    + ++ D
Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A   +     A    N+  +   +  +  SK   A A  +        V+ +  
Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFADVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250


>gi|213647483|ref|ZP_03377536.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
          Length = 201

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 11/175 (6%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  D+  A+       +     +++ +P+ ++ R   LQ+   D    +T   L R+  
Sbjct: 64  GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
               F    +  G   +  K   I     L G ++ V +GTT+E+ L    +   
Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQK 176


>gi|148728146|gb|ABR08652.1| CyuC-like protein [Lactobacillus sanfranciscensis]
          Length = 257

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 79/250 (31%), Gaps = 18/250 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +  + L  L   +   N S   D K  G L  G+      +A    +G   GF
Sbjct: 1   MKKKLGLLLTIGLSALLLVACG-NKSKQADTKTPGTLTIGMEGTYAPYAYRAKDGKLTGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+  R  +  +   P   +++          L S Q D++  +      R+      + 
Sbjct: 60  EVELARDTAKRMGLKP---KFVTTGWDSLIAGLGSNQYDVIFNDMWVNPARKKQFR--YA 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               +     I         +S L G  I    GT       ++  A  +    +     
Sbjct: 115 TPYIYSKSVLISK---PGLKMSNLKGKMIAAGTGT------ENWTTAEKLGAKVVAAPDF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK-SPLAPAIIQGDTEW 237
           +         R D      +A    K ++      + ++P    K  P+AP + +  T+ 
Sbjct: 166 QTDMDMINQGRADGAVNSEAAFNYWKKSHKDTDLTYQVIPYKYIKIEPIAPMLNKKSTKL 225

Query: 238 YNIVSWTHYA 247
              ++    A
Sbjct: 226 TKEMNKALKA 235


>gi|315145819|gb|EFT89835.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 487

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T  + N  +   I ++G L  G++     +     V       GFD+   + ++  +   
Sbjct: 27  TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++   L       AL++ +ID++      T  R   +   F        Q  I+ K+
Sbjct: 87  ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                 S     G     Q  TT E  +            P   +++ ++    + ++ D
Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A   +     A    N+  +   +  +  SK   A A  +        V+ +  
Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFADVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250


>gi|312863035|ref|ZP_07723273.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|311100571|gb|EFQ58776.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
          Length = 265

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 78/261 (29%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M K +F+    +   F  + S +  +    IK++  +     +    F     V      
Sbjct: 1   MKKFWFILTALVATCFLVACSGSQGVNTKTIKEKKKIVVATESEFAPFEFKSLVNGKDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  +A+   +      +++  ++      ++QS + DI       T  R+     
Sbjct: 61  VGADIELAKAIGERLGVK---VEFSVMSFDNVLASVQSGKSDIAIAGISVTDGRKKV--Y 115

Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y      I+ K      +S   L+  ++  Q G+  E                +
Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETVAKKQISKA----SVV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E+    ++ +  A   + +        ND  +              A A  +G 
Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLANFNLKSDGSDAYAVATRKGS 231

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +    ++        + +  
Sbjct: 232 DDLLKEINTVIKETKDSGKFD 252


>gi|309781433|ref|ZP_07676169.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308919846|gb|EFP65507.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 247

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 12/210 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +        V  NG   GFDVD   AL+  +      +++  ++ K     L S+
Sbjct: 28  LRVATDATFAPMEFV-ENGKRTGFDVDLIEALARTMG---RPVEWTDIDFKGLVPGLISR 83

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D+       T  R+  +     P  +      +      I + + L+G  + VQ GT 
Sbjct: 84  RFDVAISGIYITEERKKVVDFT-VPYYHGGLVAMVKQGNTAIKTPADLNGKKVSVQVGTK 142

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   L    K +  K   +  E+ E++       R DA      A               
Sbjct: 143 SVNYL----KENYPKVERVEVEKNEQMFNLVEIGRADAAVTGRPAAAYYVKARPG---LR 195

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           ++   ++      A+ +   E    ++   
Sbjct: 196 LVEPALTAEEYGIAVRRDQPELTKALNAAL 225


>gi|238761656|ref|ZP_04622631.1| Amino acid-binding protein [Yersinia kristensenii ATCC 33638]
 gi|238700170|gb|EEP92912.1| Amino acid-binding protein [Yersinia kristensenii ATCC 33638]
          Length = 262

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 81/247 (32%), Gaps = 17/247 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K    V      +L   +                   G       F    +    +GF
Sbjct: 1   MFKRLMLVGTYLAAVLSAGTAMAVEPTY---------VVGSGGTYRPFEYENSQKQLEGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A+  A   +  +++ +    +  F  L S   DI+      T  R+    + F 
Sbjct: 52  DIDIIKAIGKA---EGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +   Q  ++ K   + S++ L   ++ V   +T ++ ++D    +        F+  
Sbjct: 107 DPYFPAEQTIVVPKGSKVDSIAALKNLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNT 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +          A  GD+        T+   +  ++  D   +     A+ +G+ E  +
Sbjct: 165 PLMLQELYEDGIAAAVGDVGVAKFYLKTHPDKAFELVADDKFERQYFGIAVAKGNEELRS 224

Query: 240 IVSWTHY 246
            ++    
Sbjct: 225 KINSGLQ 231


>gi|161525707|ref|YP_001580719.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189349571|ref|YP_001945199.1| periplasmic substrate-binding protein [Burkholderia multivorans
           ATCC 17616]
 gi|221201060|ref|ZP_03574100.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Burkholderia multivorans CGD2M]
 gi|221206488|ref|ZP_03579501.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Burkholderia multivorans CGD2]
 gi|160343136|gb|ABX16222.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189333593|dbj|BAG42663.1| periplasmic substrate-binding protein [Burkholderia multivorans
           ATCC 17616]
 gi|221173797|gb|EEE06231.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Burkholderia multivorans CGD2]
 gi|221178910|gb|EEE11317.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Burkholderia multivorans CGD2M]
          Length = 259

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           ++ D+++   + T  R+    + F P  Y      I  +   +      + G  + V  G
Sbjct: 83  RKFDVINSAMNITAKRK--QSIDFTPPIYVVPIVMIAKRGSPLRPEVASVRGKRVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + ++  ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVS--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQEGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + +GD      V     A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKGDKALQAKVVGALDAL 238


>gi|167589509|ref|ZP_02381897.1| ABC Lysine-arginine-ornithine transporter, periplasmic ligand
           binding protein [Burkholderia ubonensis Bu]
          Length = 257

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 19/219 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   + L  +   + + + S          ++ G++     F     +G   GFD
Sbjct: 1   MKK--FALSVALACIAVGAHAKDWST---------IRFGVDASYPPFESKGVDGKVVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    + + +    +K  ++  +      AL++K+ D +  +   T  R   +   F  
Sbjct: 50  VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I  K       +  L G S+ V+ GT  E     Y+         + ++  
Sbjct: 105 KLFNTPTRLIAKKGSAARPSADALKGKSVGVEQGTIQETYAKTYWAPKG--VQVVPYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           + +     + R DA   D        L   R +      
Sbjct: 163 DGVYQDLISGRLDAALQDAVQADIGFLKTPRGAGFQFAG 201


>gi|299537492|ref|ZP_07050786.1| extracellular solute-binding protein [Lysinibacillus fusiformis
           ZC1]
 gi|298727053|gb|EFI67634.1| extracellular solute-binding protein [Lysinibacillus fusiformis
           ZC1]
          Length = 275

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 95/302 (31%), Gaps = 52/302 (17%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----------TNASILGDIK---------KRGFLKCGI 40
           M K+ F  +L L+I    + S            +A      K         K G L   +
Sbjct: 1   MKKNIFYLLLVLVISLMAACSENKTNTQVPATADAKNEDQDKSVTTEMKLVKDGKLTFAM 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +  L        N +  GFDV+  + +S  I  + + +       +     L+  + D +
Sbjct: 61  SGLLKPLNYK-ENQELVGFDVEIGKEISKRIGLEANPVT---NPWETIIQGLRGNKYDAI 116

Query: 101 SRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
             +   T  R  S  + F  P        FI  +   I +V  L G +I V   +T    
Sbjct: 117 IGSMTATEER--SKQVDFSIPYYVSGATVFISSENNDIKTVEDLKGKTIGVMQASTYVE- 173

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                 A         F             R DA   D   +  +    +   +   L +
Sbjct: 174 -----DAKKYTDKIKEFPSEIYALQDLPPGRLDAVITDR--IVGISAMQESGLKIQALGE 226

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLG 278
           +I +  +A AI + +      ++                  I ++ KD T  ++  ++ G
Sbjct: 227 VIKREEIAVAINKDNEVLLEAINKA----------------IEEMVKDGTYKEISMKWFG 270

Query: 279 ID 280
            D
Sbjct: 271 KD 272


>gi|257458171|ref|ZP_05623325.1| putative amino acid ABC transporter, amino acid-binding protein
           [Treponema vincentii ATCC 35580]
 gi|257444465|gb|EEV19554.1| putative amino acid ABC transporter, amino acid-binding protein
           [Treponema vincentii ATCC 35580]
          Length = 272

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 17/260 (6%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   V + LC++ + F+S   N             ++ +  L  G++  +   +    
Sbjct: 1   MKKRIAVYAALCILFMLFSSCRRNTKVEYIEDPSWSKVQVKSALVIGVSDFVPILSFRNE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
             +  G+D+D    L   +   P    + P+   ++ + L +  ID ++     T  R+ 
Sbjct: 61  KNEIVGYDIDIFTELCRRLGIHP---IFYPIQWAQKEILLNTGVIDCIASGFSVTEERKQ 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              +        + +  +    +G  +++QL   +I V+A T  +  L    +A      
Sbjct: 118 HYRM--CTPYLQNAKIVVTLAGRGYQTLAQLQNRTIAVEADTAGDEALL-NVEALKDHVI 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                 ++++  A  +  CDA   D   +Y+L   +  P ++ I+ + IS      A  Q
Sbjct: 175 IKAMATIDQLYEALDSGTCDAIVVD--LIYSLDTLDKNP-QYSIINEAISTEYYTFAFRQ 231

Query: 233 GDTEWYNIVSWTHYAMVTAE 252
            D      +      M   E
Sbjct: 232 TDASLVAKIESVLAEMNEDE 251


>gi|257459776|ref|ZP_05624885.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
 gi|257443201|gb|EEV18335.1| bacterial extracellular solute-binding protein, family 3
           [Campylobacter gracilis RM3268]
          Length = 268

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 10/222 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD-DPSKIQYLPL 83
             L  I++ G ++ G+        E    G ++GF++D   A++  IF     KI+++PL
Sbjct: 17  DSLDQIRQNGVIRIGVRDAHPPLCESNG-GKFEGFEIDLANAIAKEIFGKKEGKIEFIPL 75

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +  +R   L++ ++D++      T  R+    + F         G +  K    + ++QL
Sbjct: 76  SVNDRIPFLEANKLDLVIGLFSITNERKR--KIDFSLPYLSVNLGVLTRKADAFTDIAQL 133

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
               I  +   T    +A+ F  +    +       +E     R    D Y  D      
Sbjct: 134 HDKKIVFEGDAT----VAERFFKNKGFKNLGHCASAKECYEMIRNGDADGYINDNLI--V 187

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L  +    +  V   ++     +   + + + E  + V+   
Sbjct: 188 LAYSVIDDTLEVPFKNLGPSDFIGIGVQKDNKELLDFVNAEL 229


>gi|116054041|ref|YP_788484.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|296386808|ref|ZP_06876307.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa PAb1]
 gi|313112073|ref|ZP_07797857.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
 gi|115589262|gb|ABJ15277.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310884359|gb|EFQ42953.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa 39016]
          Length = 256

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 19/239 (7%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+++   +   +A +L D+ +RG L+  +      F   +  G   GF+ +    L++ 
Sbjct: 7   LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +   P    ++          LQS + DI          R       F           I
Sbjct: 66  LEVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 120

Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +         S+  L G  + V  GT                 +   +    E      +
Sbjct: 121 VRADDTRQFRSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175

Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R DA   D         +          + P      P      + + ++   ++   
Sbjct: 176 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 230


>gi|94987158|ref|YP_595091.1| amino acid ABC transporter periplasmic protein [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731407|emb|CAJ54770.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 260

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 85/245 (34%), Gaps = 16/245 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + I  L   FF      A      KK  ++  GI+     F+ +  +GD  GFD
Sbjct: 5   MKYMLSLWINILFCFFFIVNPIYAE-----KKEHYIN-GIDAHYPPFSFIDEHGDPTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    +++ +      +++ P++      AL +K+ID++      +  RE    + F  
Sbjct: 59  VEALNWIANKLG---FTVEHRPISWDGIIPALLAKKIDMICSGMSISPEREK--NILFTR 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +   +  I+HK   ++      G +I   VQ GT     L    K    KY    ++ 
Sbjct: 114 PYWITQKILIVHKDSKLTPEEIFYGENIIVGVQCGTNEATFLEKELKNKGYKYKLRYYDS 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +       R +A   D      +            L  I        A+ + +T+  
Sbjct: 174 SPLVIKDLLNGRINAAVMD---CLPVDNAIKHNKAIKKLYIIDYSDAFGVAVRKENTQLA 230

Query: 239 NIVSW 243
             +  
Sbjct: 231 KRIED 235


>gi|52784240|ref|YP_090069.1| YckK [Bacillus licheniformis ATCC 14580]
 gi|163119224|ref|YP_077659.2| solute-binding family protein 3 YckK [Bacillus licheniformis ATCC
           14580]
 gi|319648832|ref|ZP_08003043.1| YckK protein [Bacillus sp. BT1B_CT2]
 gi|52346742|gb|AAU39376.1| YckK [Bacillus licheniformis ATCC 14580]
 gi|145902730|gb|AAU22021.2| putative extracellular solute-binding protein, family 3 YckK
           [Bacillus licheniformis ATCC 14580]
 gi|317389251|gb|EFV70067.1| YckK protein [Bacillus sp. BT1B_CT2]
          Length = 268

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 74/263 (28%), Gaps = 26/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAE 49
           M K  F  +L L+I    +   +            S+   IK +G L  G       F  
Sbjct: 1   MKKAIFAVLLTLLITVMAACGASGDNSKDKNAAGDSLWSSIKDKGVLTVGTEGTYEPFTF 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV+  + ++  +        +        F  L SK+ D+++       
Sbjct: 61  HDKKTDKLTGYDVEVMQEVAKRLNLKAE---FKETQWDSMFAGLNSKRFDVVANQVG--- 114

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
            ++      F           +       + S   + G     Q+ T+    LA    A 
Sbjct: 115 KKDREDQYDFSDSYTTSQAVVVTKADNNDVKSEGDVKGKK-AAQSLTSNYNDLAKNAGA- 172

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    E + +     +  R D    D  A+     T+       I  +        
Sbjct: 173 ----EIEGVEGMAQAFQLIQQGRVDLTYNDKLAVLNYLKTSGN-KNLKIAFETGEPQTTH 227

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
            A  +G  E  + V+     M  
Sbjct: 228 FAFRKGSGELVDKVNSALKDMKE 250


>gi|322390126|ref|ZP_08063660.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus parasanguinis ATCC 903]
 gi|321143157|gb|EFX38601.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus parasanguinis ATCC 903]
          Length = 275

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 82/245 (33%), Gaps = 8/245 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    S L L+ +  TS     S       +  ++ G       F+  + +G   G+++
Sbjct: 4   KKVIKYSALGLVAVLATSALVACSSGKSASGKKTIEVGTVGTTKPFSYEEKDGKLTGYEI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  R +      D  ++ +        F  L S +  I + N  ++  RE      +   
Sbjct: 64  EVLREIFK--GSDKYEVNFNKTEWSSVFAGLDSDRFQIGANNISYSKEREE--KYLYPNP 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER--V 179
              +    ++ K   I S+  + G    V  GT+T   L DY K H+     + +    +
Sbjct: 120 YARNPLVLVVPKDSSIKSLDDIGGKKTEVVQGTSTAKQLEDYNKKHSDNPTDLQYTDGTI 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238
           + I A     R D    +        + +       ++     + P     I + D +  
Sbjct: 180 QTIMANLADGRTDYKIFER-ISVDTIIRDQGYDNLKVIELPSDQQPYVYPIIAKEDKDLQ 238

Query: 239 NIVSW 243
             V+ 
Sbjct: 239 KFVNK 243


>gi|222102716|ref|YP_002539755.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739317|gb|ACM40050.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 261

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 90/271 (33%), Gaps = 28/271 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M K   V  +       T  S+ A           ++ G+       F+   A+G W+G+
Sbjct: 1   MKKIAIVLSVIAATFGMTKPSSAAD--------DVIRFGVAAEPYAPFSVKDASGKWQGW 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+ + +    +K + + +       AL +K+ D++  +   T  R+    + F 
Sbjct: 53  EIDLMDAVCNQM---KAKCEIVDVAWDGIIPALLAKKFDVIWSSMSITDERKKV--IDFT 107

Query: 120 PITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
              Y+     +  K       ++      G ++  Q+ +     +   F   N      +
Sbjct: 108 DKYYYSPNVLVGAKADTRSFDVAKPETFKGITVAAQSSSLQATYMQQKF---NGMSDLKL 164

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAI 230
           +  +++  A  +A R D        +       +   +   +   +    +        +
Sbjct: 165 YPTLDDEIADIQAGRVDLMAAAGIQIQDFLSKPE--GQAYEIKVTLPHETMFGYGDGGGL 222

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            + DT   + ++    A+  + E     K  
Sbjct: 223 RKEDTALKDKLNAALKAVRASGEYDAITKRY 253


>gi|120597748|ref|YP_962322.1| extracellular solute-binding protein [Shewanella sp. W3-18-1]
 gi|120557841|gb|ABM23768.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           W3-18-1]
          Length = 244

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 18/225 (8%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD+D  + ++         ++   +     
Sbjct: 23  KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
            +AL S +ID ++     T  R+    + F    Y   Q  +++K    I ++  + G  
Sbjct: 80  IVALNSGKIDFIASGMTITAERQA--NVNFSDPYYEATQVVLVNKDNDSIHTLEDIKGKH 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ GTT +        +     +   F    E     +  + D    D          
Sbjct: 138 FAVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNSKVDLVLFDSEPAANYLAK 191

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           N    E  ++           A+ +   E    ++ T  A + A+
Sbjct: 192 NP---ELKMIKLDFPAEFYGFAVSKKQPELLASINKTL-ANMKAD 232


>gi|326333415|ref|ZP_08199661.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325948811|gb|EGD40905.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 263

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 82/261 (31%), Gaps = 18/261 (6%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAEVKAN 53
           M      + L +    + L                 + K   L    +     F      
Sbjct: 1   MNLRKLAAALTVPALGLALAACGGGDEGGTSPSGAKLVKADTLTICTHLPYKPFEF-NEG 59

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  GFD+D  +  + A   +   +            AL S + D+ +     T  RE  
Sbjct: 60  GEVVGFDIDVLKIAADAEKLETEVVNIGWET-IVSGEALNSGKCDVAAGAMTITEEREKV 118

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +   F    +   Q  +  K  G +S+  L+G +I VQ  TT    + +           
Sbjct: 119 M--DFTEPYFEATQALMTKKGAGYASLDDLAGKTIAVQEATTGADYVKENAPK---DAKI 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ- 232
           I  E    +  A ++ + DA   D   LY         ++  I  +  +      ++ + 
Sbjct: 174 ITLEDSALMMQAVKSGKADAGVNDNGLLYDFV---KENTDTEITSEFQTGEAYGFSVKKG 230

Query: 233 GDTEWYNIVSWTHYAMVTAEE 253
           G+ +   +++         +E
Sbjct: 231 GNDKLLEVLNKGINDKAAYDE 251


>gi|326792536|ref|YP_004310357.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
           5427]
 gi|326543300|gb|ADZ85159.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium
           lentocellum DSM 5427]
          Length = 275

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 15/239 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+ ++  +          +  G N     F       D  GFDV+  +A+++ +  +   
Sbjct: 40  TAEASPENSTEPTNSDNVIVMGTNAEFEPFEYRDGL-DIVGFDVEIAKAVANKLGKE--- 95

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           ++   +      + L + ++D ++     T  R  +  + F    +   Q  I+      
Sbjct: 96  LKIEDMAFDSLIMGLNNDKMDFIAAGMTATEER--AQQVDFSDSYFKSKQVIIVKADNTA 153

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+S   L G S+ VQ GTT      D F +       +  ++  +     +  + DA   
Sbjct: 154 IASADDLVGKSVGVQLGTTG-----DLFVSGTEGVTVVQVKKGTQAVMDLQNGKVDAVVI 208

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D       K      ++  IL     +   A A+ +G+TE  N ++ T   +    E  
Sbjct: 209 DE---EPAKKMIAGKTDVKILEVPFIEEEYAIAVKKGNTELLNTINETIEELKANGEYD 264


>gi|171317967|ref|ZP_02907141.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171096867|gb|EDT41741.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 267

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + +          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLVVSALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRDAICEQL---RAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + + + L+G  + +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATRG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++   +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIAAI 238


>gi|239907738|ref|YP_002954479.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
 gi|239797604|dbj|BAH76593.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
          Length = 250

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 87/253 (34%), Gaps = 19/253 (7%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K F   ++ L   +L F   +          +      GI+ G   F  V   G   G
Sbjct: 1   MRKRFGLLLAALAAFVLCFGGLAQA--------EEKVYVNGIDFGFPPFGFVDKAGKPTG 52

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+    ++  +     K+++ P++      AL +K+IDI++     T  R  +  + F
Sbjct: 53  FDVESLDWIAKKMG---FKVKHQPMDWDGIIPALLAKKIDIIASGMSATAER--AQKVDF 107

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y   Q  ++  K+       L  G  I VQ GT T   L  +      K+  + ++
Sbjct: 108 SIPYYEVTQVLVVGDKEATPFAEILKSGKKIGVQRGTVTAKLLEGFVGQPGYKFELVPYD 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +      +  R      D +           P   +      +      A+ + D E+
Sbjct: 168 STDLSMEDVKIGRIAGSGMDSTIAA---EVMKAPGFKIAGTFDAAPEKYGYAMRKEDKEF 224

Query: 238 YNIVSWTHYAMVT 250
              V+     ++ 
Sbjct: 225 QAKVNEGLKLLMA 237


>gi|268589604|ref|ZP_06123825.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Providencia rettgeri DSM 1131]
 gi|291315078|gb|EFE55531.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Providencia rettgeri DSM 1131]
          Length = 255

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K    +    +  F  +     S             G       F    +    +GFD
Sbjct: 1   MFKKLVFAGCMSLAAFAGNVYAKES----------YTVGAGGTYRPFEYENSQKQLEGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   D   ++ +    +  F  L S   DIL      T  R+    + F  
Sbjct: 51  IDIIKAIAEAEGFD---VKLVNTPWEGIFATLSSGDRDILISGITITDKRKNM--VDFSN 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ +   +  ++ L   ++ V   +T ++ ++D    +        F+   
Sbjct: 106 PYFPAEQAIVISETSDVKDLNSLKDLNVGVVNSSTGDIVVSDVIGKN--STAIKRFDNTP 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +         DA  GD+  +     T+      +I  +   K     A+ +G++E    
Sbjct: 164 LLLQELFEDGIDAAVGDVGVIKYYIKTHPEKKFKLIYDNHFEKQYFGIAVAKGNSELQQK 223

Query: 241 VSWTHYAMVT 250
           ++     ++ 
Sbjct: 224 INNGLDKIIA 233


>gi|206576704|ref|YP_002239088.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Klebsiella pneumoniae 342]
 gi|288935991|ref|YP_003440050.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290512797|ref|ZP_06552162.1| glutamine transport system substrate-binding protein [Klebsiella
           sp. 1_1_55]
 gi|206565762|gb|ACI07538.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Klebsiella pneumoniae 342]
 gi|288890700|gb|ADC59018.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289774680|gb|EFD82683.1| glutamine transport system substrate-binding protein [Klebsiella
           sp. 1_1_55]
          Length = 250

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 82/248 (33%), Gaps = 25/248 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L +    F + + +            +  G++T  V F   + +  + GFD+D
Sbjct: 7   KLKLTLALVICSASFVTAAQD-----------KITVGVDTAFVPFEFKQGD-KYVGFDID 54

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +       +  P++       LQS+ +D+       T  R+    + F    
Sbjct: 55  LWDAIAKKM---HISYELRPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSDGY 109

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y       +      I+  S L+G  + ++ GT     +   +KA+      I F  ++ 
Sbjct: 110 YNADLLIAVKSTDNSIAKFSDLTGKKVGLKQGTAAASFMKSKYKANY-----IEFPNIDN 164

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNI 240
                +A   DA   D   +     T            D I       A+ + ++     
Sbjct: 165 AYLDLQAGNLDAVVHDSPNVLYYVKTAGNGKVKSTGETDSILPQQYGFAMQK-NSSLTPK 223

Query: 241 VSWTHYAM 248
           V+    A+
Sbjct: 224 VNQALQAL 231


>gi|149907745|ref|ZP_01896492.1| Arginine-binding periplasmic protein 1 precursor [Moritella sp.
           PE36]
 gi|149809415|gb|EDM69344.1| Arginine-binding periplasmic protein 1 precursor [Moritella sp.
           PE36]
          Length = 247

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 27/253 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L  L  TS +   +    IK               F  + AN +++GFD
Sbjct: 1   MKK-------LLTALILTSAAAQVTAAEQIK------FVTEATYPPFEMMDANNEFQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+ S +    ++  +   +      +L+ ++ D      D T  R+    + F  
Sbjct: 48  IDIARAVCSEL---KAECSFANQSFDSLIPSLKFRRYDAAIAAMDVTPARKK--QVDFSD 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y +    +  K    + V+ LSG ++ VQ GT+ +  + + +   + K   + F   +
Sbjct: 103 IYYENSAVLVAEKG-KYNVVADLSGKAVGVQNGTSHQAYMTETYA--DEKVLLLNFPSYQ 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R +    D +  +     +     +  +   ++         A A+ +G+ 
Sbjct: 160 KAFLDLKNGRINGVFADSAVAHDWLSKHS-GGNYETVGKAVTDEKYFGAGFAIAVRKGNA 218

Query: 236 EWYNIVSWTHYAM 248
           E    ++    A+
Sbjct: 219 ELLTKLNKGLQAI 231


>gi|317061042|ref|ZP_07925527.1| amino acid-binding protein [Fusobacterium sp. D12]
 gi|313686718|gb|EFS23553.1| amino acid-binding protein [Fusobacterium sp. D12]
          Length = 241

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 27/245 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F   + + ++    F+              L  G N     F  +   G   GFD
Sbjct: 6   MMK-YFGMFILMGMMSAVMFA------------KTLYVGTNAEFAPFEYL-EKGKITGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL+  +  D   I+   +       ALQ K++D++      T  R+    + F  
Sbjct: 52  IELMNALAKEMKMD---IKIENMAFDGLLPALQMKKVDVVIAGMTETPERKK--AVNFTK 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  I  K K I    +LSG  + V  G T +  ++D   A         F+   
Sbjct: 107 PYFKAKQVIITKKGKDIKDFQELSGKKVGVMLGFTGDAVVSDIKGAK-----VQRFDATY 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A    + DA   D         +     +  I      +   A A+ + D      
Sbjct: 162 SAVMALENGKVDAVVADSEPAKKYIASYK---DLSIASAKAEEEDYAIAVRKNDKVLLEN 218

Query: 241 VSWTH 245
           ++   
Sbjct: 219 LNKAM 223


>gi|311070993|ref|YP_003975916.1| putative ABC transporter binding lipoprotein [Bacillus atrophaeus
           1942]
 gi|310871510|gb|ADP34985.1| putative ABC transporter binding lipoprotein [Bacillus atrophaeus
           1942]
          Length = 287

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 76/260 (29%), Gaps = 21/260 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSFS----TNASI--LGDIKKRGFLKCGINTGLVGFAE 49
           M      K   + +     L  T+ S     ++       IK++G +    +  L   + 
Sbjct: 1   MKSYTRSKAAVLILTLAFFLITTACSGKEEADSKTSDWDQIKEKGKIVVATSGTLYPTSY 60

Query: 50  VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                 +    G++V+  R  +  +  +   +++  +       A+ S QID  + + D 
Sbjct: 61  HDTESGSDKLTGYEVEVIREAAKRLGVE---VEFKEMGIDGMLTAVNSGQIDAAANDIDV 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  RE     +      +           GI ++  L G      A T       D  + 
Sbjct: 118 TKDREKKFAFSAPYKYSYGTAIVRKDDLSGIHTLKDLKGKKAAGAATTVYM----DVARK 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +  +         E+        R D    D              +  +        +  
Sbjct: 174 YGAEEVIYDNATNEQYLKDVANGRTDVILNDYYLQALALAAFPDLNITIHPDIKYMPNKQ 233

Query: 227 APAIIQGDTEWYNIVSWTHY 246
           A  + + +TE    ++ T  
Sbjct: 234 ALVMKKSNTELQKKMNQTLK 253


>gi|322389670|ref|ZP_08063218.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321143669|gb|EFX39099.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 727

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 63/210 (30%), Gaps = 16/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L      +   +A           +K   +T    F    ++  +KG D
Sbjct: 1   MKKKLLACLLFLFPFVAFAGHAHAET---------IKVVFDTAYAPFEFKDSDQTYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++     D  K             A+Q+ Q D +      T  RE         
Sbjct: 52  VEILDKVAEINGWDLDK---SFPGFDAAVNAVQAGQADAIMAGMTKTTEREKV--FTMSD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+  SQL G ++ V+ GT  +  L      +  K     F+  +
Sbjct: 107 TYYDTKVVIATTKADKITKYSQLKGKTVGVKNGTAAQRFLDKNKDKYGYK--IKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D   +         
Sbjct: 165 LMYNSLSAGAVDAVMDDQPVIQYAIQKGQD 194



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 10/204 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+       ++    F        + G D+D  +A++         I+            
Sbjct: 270 KKSKYVISSDSSFAPFVFQNGKNKYTGIDMDLIKAIAKD---QGFTIEINNPGFDAAVSD 326

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS     +      T  R+ +    F    Y       + +   I S   L G ++ V+
Sbjct: 327 VQSGHAQGMIAGMTVTDARKET--FDFSEPYYTANSILAVQESSKIDSYDDLKGKTVGVK 384

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT+++  L +  K +  K     F     +  +  +    A   D   +   K    + 
Sbjct: 385 NGTSSQNFLEENQKKYGYK--IKTFSDGASMYDSLNSGSVAAIMDDEPVI---KYAIKQG 439

Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235
            +     +      LA A+ +G+ 
Sbjct: 440 RKFKTPIEGTPSGQLAFAVKKGEN 463


>gi|258611866|ref|ZP_05711691.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria
           monocytogenes FSL R2-503]
 gi|258606739|gb|EEW19347.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria
           monocytogenes FSL R2-503]
          Length = 444

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 87/237 (36%), Gaps = 15/237 (6%)

Query: 34  GFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L  G++     +     +       GFDV     ++  +     K++   +N      
Sbjct: 1   GVLTVGLSADYPPYEFHQTIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLG 57

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASI 148
           +L++ +ID++      T  R+    + F     F  Q  ++ K  K   +SV+  SG  +
Sbjct: 58  SLKTGKIDMIISGMSPTPERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKV 115

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             Q  TT E    +      +    +  ++V ++    ++++ DA   +     A    +
Sbjct: 116 GAQKQTTQEELAQNEL----VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQD 171

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
              +   I     SK   A A+ +G T     V+ +   +     L   QK  N++ 
Sbjct: 172 KTLAMADIKFANGSKE-TAIAMPKGSTALQEKVNVSIKDIQDTGLLKKYQKEANKLM 227


>gi|294783189|ref|ZP_06748513.1| CjaC protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480067|gb|EFG27844.1| CjaC protein [Fusobacterium sp. 1_1_41FAA]
          Length = 242

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 86/256 (33%), Gaps = 23/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + ++ L+ +  +  +          K   +  G N     F  +       GFD
Sbjct: 1   MKKIFKLILMSLLSVVISVSAFA--------KNKVVYVGTNAEFAPFEYL-EKNKVVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K++D++      T  R+    +AF  
Sbjct: 52  IDLLDAISKETG---LEFKVQDMAFDGLLPALQTKKVDMVIAGMSATPERKK--AVAFSK 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  I       + S   LSG  + V  G T +  +++             F   
Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLSGKKVGVMLGFTGDTVVSEI-----KGVKVERFSAS 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ DA   D     A K T +   + VI      +   A A+ + D E  +
Sbjct: 162 YAAIMALSQNKVDAVVLDSE--PAKKYTANN-KQFVIASIPAEEEDYAIAVRKNDKELLD 218

Query: 240 IVSWTHYAMVTAEELG 255
            ++     +    E  
Sbjct: 219 KINAALDKIKANGEYD 234


>gi|170697857|ref|ZP_02888942.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170137244|gb|EDT05487.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 267

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 87/254 (34%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+ + +          ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLVVSALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRDAICEQL---RAKCAWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + + + L+G  + +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   + +    ++   +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAVAGPDVTDVRITGYGVAMGVRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIAAI 238


>gi|170767445|ref|ZP_02901898.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia albertii TW07627]
 gi|170123779|gb|EDS92710.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Escherichia albertii TW07627]
          Length = 260

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F    + G+  GFD+D  + L   I    ++  ++         +L++K
Sbjct: 28  IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154
           +ID +  +   T  R     +AF    Y      ++ K          L G  + V  GT
Sbjct: 85  KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDTQPTVDSLKGKRVGVLQGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E    +Y+    +    + ++  + I +   A R DA   D  A     L      ++
Sbjct: 143 TQETFGNEYWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +    L        + + D E    ++   +A + A+          +++K   
Sbjct: 201 KFGGPSVKDEKLFGVGTDMGLRKDDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|167564916|ref|ZP_02357832.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia oklahomensis EO147]
          Length = 260

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 75/221 (33%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F     +G   GFDVD    +   +    +K  ++  +      
Sbjct: 23  KDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           AL++++ D +  +   T  RE  +   F    +      +  K   +   +  L G ++ 
Sbjct: 80  ALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTADSLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y+    +K  P  ++  +++ A   A R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWAPKGVKVQP--YQNQDQVYADLLAGRLDAALQDAVQADIGFLKTP 195

Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
           R  +       +             + + DT+    +    
Sbjct: 196 RGKDFAFAGSDLDDPKTLGEGAGIGLRKEDTDLKAKIDKAI 236


>gi|319780065|ref|YP_004139541.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317165953|gb|ADV09491.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 266

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 83/227 (36%), Gaps = 16/227 (7%)

Query: 30  IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + K   +K G+       F    A+G W G+++DF  A+ +    D       P+     
Sbjct: 21  VAKADPVKIGVAAEPYPPFTSPDASGKWIGWEIDFIDAVCAEEKLD---CVITPVAWDGI 77

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGAS 147
             AL +K+ID++  +   T  R  +  + F    Y      I  K +   S    L G  
Sbjct: 78  IPALTTKKIDLIVSSMSITAERAKT--IDFSDKYYNTPTAIIGPKDQKFGSAPDDLKGKI 135

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ  T   +    +F +         ++  +E +    A R DA   D S      L 
Sbjct: 136 VGVQVSTVHAVYAKKHFGSA--ASEIKEYQTQDEANNDLAAGRLDAVQAD-SIALGEFLK 192

Query: 208 NDRPSE-----HVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAM 248
           +D+         ++ PD     P +   + + DTE    ++    A+
Sbjct: 193 SDQGKACCDLKGMVAPDDEVLGPGVGAGVRKEDTELKGKINAGIKAI 239


>gi|292488873|ref|YP_003531760.1| histidine ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|291554307|emb|CBA21659.1| Histidine ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
          Length = 249

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 13/221 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ G +     F    A G   GFD+D    +   +    +K  ++  +      +L+
Sbjct: 15  KTLRIGTDPTYAPFEMKNAEGQLTGFDIDLANEICQRM---ETKCTFVESDFDALIPSLK 71

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +K++D +  +   T  R     +AF    Y      I  K   I  +++ L G +I +  
Sbjct: 72  AKKVDAIISSLSITAKR--QQEIAFSAKLYAANSRLIAPKGSKIQPTLASLKGKTIGLLQ 129

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT E      ++   +   P  +   + +     A R DA   D  A     L      
Sbjct: 130 GTTQETYANQNWRPQGVTVTP--YANQDLVYQDLTAGRIDAAFQDEVAASEGFLKQPVGK 187

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
           ++      I    +        + + +      +      M
Sbjct: 188 DYAFAGPAIKDEKIFGVGTGIGLSKDNPALKAAIDKAFDDM 228


>gi|254506025|ref|ZP_05118170.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
 gi|219551248|gb|EED28228.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
          Length = 278

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 17/252 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            K F  +I  L+ L     S  +    +  I +RG L+ G++T  V +A     G+  GF
Sbjct: 10  KKSFKRAITALLGLAIALPSMASDTPNINKINERGTLRVGMST-FVPWAMRNTQGELIGF 68

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  + L++        ++++P        AL +++ D++      T  R  S  + F 
Sbjct: 69  EIDVAKRLAADSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSVTPER--SKSVLFS 123

Query: 120 PITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                 G     + +        S        I  + G  T     + F         + 
Sbjct: 124 TPYSHSGVQVAANTELAAGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK----ILQ 179

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +           A            + +      +   + +SK   A A+  G+ 
Sbjct: 180 FDDDAQAFQEVLNGNAHAVIASSPKPEHEAVKHADKL-FIPFSERLSKGNEAFAVRLGEE 238

Query: 236 EWYNIVSWTHYA 247
           +          A
Sbjct: 239 DKKAFFDEWINA 250


>gi|170732174|ref|YP_001764121.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|254246173|ref|ZP_04939494.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124870949|gb|EAY62665.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|169815416|gb|ACA89999.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 259

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F     +G  +GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKTPSGQLQGFDVDVGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+    + F P  Y      +  +   +   V+ L G  + V  G
Sbjct: 83  RKFDAINSAMNITAKRK--QSIDFTPPIYVVPIVMVAKRGSPLKPDVASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + ++  ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + + D      +     A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKNDKALQAKIVGALDAL 238


>gi|296162053|ref|ZP_06844851.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295887674|gb|EFG67494.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 255

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 19/246 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + +   +     +F+ +++          L+ GI+           +G +KGFDVD
Sbjct: 2   KISLMILSAALAFSSGAFAADSTT---------LRLGIDPTYPPMDSKAPDGSFKGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   I    ++ Q++ L       ALQ+++ID +  +   T  RE    + F    
Sbjct: 53  LGNEICKRI---HARCQWVELEFSGMIPALQARKIDAILSSMAITEKRE--QQILFSSKL 107

Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +      I  +   ++  ++ L G  I VQ+GT  E      +       H + ++  EE
Sbjct: 108 FQFKSRLIARQGSALAGGLNALPGKQIGVQSGTQFEGYALKNWAPLG--VHVVAYKSQEE 165

Query: 182 IDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + A     R D        +    L+    +    V  P  +    +   + + +T    
Sbjct: 166 VFADLENGRLDGALLGSVEADYGFLRTQAGKGFAFVGEPLSMGDRGVGIGLRKDETAVQA 225

Query: 240 IVSWTH 245
            ++   
Sbjct: 226 SINEAI 231


>gi|296135304|ref|YP_003642546.1| extracellular solute-binding protein family 3 [Thiomonas intermedia
           K12]
 gi|295795426|gb|ADG30216.1| extracellular solute-binding protein family 3 [Thiomonas intermedia
           K12]
          Length = 288

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 17/258 (6%)

Query: 6   FVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63
               + L  +F  S S     L    K++G L    +        +  +G    G DVD 
Sbjct: 17  LAGSVALCAVFCASASATPIALPQKYKEQGHLTIAADATYAPMEFIAKDGKTVVGADVDL 76

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +A++  +        ++  +      ALQS + D+   +   T  RE    + F     
Sbjct: 77  GKAIAKKLGVKAD---FINASFDSIIPALQSGKYDMSMSSFTITKKREEV--VDFV-SYM 130

Query: 124 FDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFE 177
             G  F +  K    ++ ++ L G S+ V+ GT      A    +   A        VF 
Sbjct: 131 TAGTSFYVKAKGGPKVNGLADLCGMSVAVEKGTVQSADAAKQSQECVAAGKKAVTVSVFP 190

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                + A  + R        S + A  +   R  +  +  +  + +P   AI + ++  
Sbjct: 191 DQNGANLAIVSGRAQ-VGMADSPVAAWIVEESRG-QFKLTGESYNSAPYGIAIPK-NSGL 247

Query: 238 YNIVSWTHYAMVTAEELG 255
              V      ++ + E  
Sbjct: 248 AEPVLQALKEVIASGEYA 265


>gi|238751796|ref|ZP_04613283.1| Arginine-binding periplasmic protein 2 [Yersinia rohdei ATCC 43380]
 gi|238709925|gb|EEQ02156.1| Arginine-binding periplasmic protein 2 [Yersinia rohdei ATCC 43380]
          Length = 231

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 74/216 (34%), Gaps = 12/216 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++   +     F  + AN +  GFD+D  +AL   +    +   +          AL+ 
Sbjct: 10  TIRFAASATYPPFESMDANNEIVGFDMDLAKALCKQM---EANCTFTNQAFDSLIPALKF 66

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R   +   F    Y +    I  K    SS + L G  I ++ GT
Sbjct: 67  KRYDAVISGMDITPERSKQVA--FTQPYYANSAIVIAPKG-KFSSFADLKGKKIGMENGT 123

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE- 213
           T +  L D           + ++  +      +  R D   GD + +     TN   +  
Sbjct: 124 THQKYLQDTHPE----IKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLATV 179

Query: 214 -HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +       + L  A+   +T     ++    A+
Sbjct: 180 GEHVTDPQYFGTGLGIAVRPENTALLEKLNKAIDAV 215


>gi|91779033|ref|YP_554241.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91691693|gb|ABE34891.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 289

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 87/256 (33%), Gaps = 14/256 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                  L+     S + +A+   +IK RG+L          F  V A+G   G+D D  
Sbjct: 22  LRTCAFALVAAIGVSHAAHAASAEEIKARGYLSVATEDDYTPFEFV-ADGKNTGYDNDLL 80

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             +   I  D   I+   +        + + + D+       T  R+ +    F   T  
Sbjct: 81  ALVRKKIGVD---IKQQVMPWSGILPGVTTGKYDMALTAVLVTDERKKT--FDFASPTCE 135

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK------YHPIVFER 178
               + + K   I S   L G  +  + G+     L  + +    K         + ++ 
Sbjct: 136 AVTFYAVKKGSTIKSPDDLVGKVVGAETGSAMLADLKLFNEELKKKHGGNGLKQIVEYQS 195

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E        R DA      +L +L     RP   V+   I   + +A A+ +G+++  
Sbjct: 196 YPEAYQDLGLGRVDAVANTQISLNSL--VKTRPDTFVVGQAIGKPTYIAWAVKKGNSDVL 253

Query: 239 NIVSWTHYAMVTAEEL 254
            +V      +  + E+
Sbjct: 254 KMVDAALLELRKSGEM 269


>gi|115351121|ref|YP_772960.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115281109|gb|ABI86626.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 264

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 74/221 (33%), Gaps = 13/221 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +     K  ++  +      ALQ
Sbjct: 30  KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KVKCVWVENDFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++ D ++ +   T  R+    +AF    Y      I  +  G+  +   L G  + V  
Sbjct: 87  ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +         + ++  +   A  ++ R DA   D  A     L+  +  
Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
                   ++ + +        + + D      +      +
Sbjct: 203 GFGFAGGTVADADILGSGVGFGLRKNDAALKTALDQALKGL 243


>gi|291530188|emb|CBK95773.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Eubacterium siraeum 70/3]
          Length = 281

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 79/251 (31%), Gaps = 20/251 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K     IL             ++        G L      G   +  +  N D  G 
Sbjct: 24  MKIKRIIAGILVAATCGLAMAGCQSNT-----TGGKLIMATEPGFAPYEYMSGN-DVVGI 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++  +     +++   ++     LA+Q  ++D  +     T  R     + F 
Sbjct: 78  DVDIANEVAKELG---MELEIQSMDFDGALLAVQQGKVDFAAAGISVTPER--QEAMDFS 132

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                  Q  ++ K    + S   L G +      +T    +AD +   ++K  P  + +
Sbjct: 133 IEYAKSKQVIVVLKGANRVKSADDLGGDTKIAVQMST----VADTYVTDDLKKEPSRYTK 188

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     ++ + D    D       K          IL   +     A A  +G+TE  
Sbjct: 189 YVQAAEDLKSDKVDCIVMDE---LPAKEMVKGNDNLEILDGEVFTDKYAFAFKKGNTELE 245

Query: 239 NIVSWTHYAMV 249
             V+     ++
Sbjct: 246 EKVNKVLQKLI 256


>gi|260461851|ref|ZP_05810097.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|319785376|ref|YP_004144852.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|259032492|gb|EEW33757.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|317171264|gb|ADV14802.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 284

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 14/249 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            +    ++         +    A    S L  I KRG L  G        +   A G  +
Sbjct: 3   RRSMLSAMGATAAASLVAKGAKAEEVTSTLDAIMKRGHLLAGARYDYPPGSFADAQGVVQ 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+  D  R     +  +   ++++   ++ R   L + QID     T  + +RE    + 
Sbjct: 63  GYGPDVAREFGKHLGVE---VKFVQTTSQTRIPLLLNGQIDAEFGPTTNSKIREEV--VD 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  I   +    ++ K +  +     +G    + A  T       Y++A N      +F+
Sbjct: 118 FSLIWNTEQAVILVRKGEP-TDPKAYAGTEKTIGA--TQGAVYIGYWRATNAGAKFKLFQ 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E+  A    + D    D      +          + + +   +   A  + Q D++W
Sbjct: 175 QYPELLLAVAQGQVDCVLIDSLQAELMIEKMSDAK--LAVGEPFYRDSSAIMVRQNDSKW 232

Query: 238 YNIVSWTHY 246
            N V+W   
Sbjct: 233 RNWVNWGLQ 241


>gi|213965170|ref|ZP_03393368.1| bacterial extracellular solute-binding protein, family 3
           [Corynebacterium amycolatum SK46]
 gi|213952284|gb|EEB63668.1| bacterial extracellular solute-binding protein, family 3
           [Corynebacterium amycolatum SK46]
          Length = 359

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 89/218 (40%), Gaps = 10/218 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +I +RG +  G++  L   +    + G+  GF+V   + ++  IFD+P  +++  +++ E
Sbjct: 96  EIYQRGRIIVGVDQSLNLLSFRDFSTGELSGFEVSLAQEIARDIFDNPDAVEFRFVDSNE 155

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  AL+   +D++ R    T  R     + F         G ++    G +S   +    
Sbjct: 156 RTAALEDGTVDVVLRTMTVTDAR--RERVLFSAPYLTARAGVLVSSPGGDASPEDVEDGR 213

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           ICV  G+TTE    D  +  +     ++     +   + +  + +    D + L  +   
Sbjct: 214 ICVSRGSTTE----DLIRRLSPNNTLLLVGNWSDCLISLQNSQAEIVVADDTILAGINDQ 269

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +       I+   +++   A  + +G+      ++ T 
Sbjct: 270 DP---ATAIVQRGLNEESYAAGVSKGNPGLVRQINATL 304


>gi|241206847|ref|YP_002977943.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860737|gb|ACS58404.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 257

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 64/224 (28%), Gaps = 13/224 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK  G  K G       F     +G   GFDV+   A+++ +        ++ 
Sbjct: 23  AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141
                    L +K+ D +      T  R+      F           I       I S +
Sbjct: 80  GKWDGLIAGLDAKRYDTVINQVGITETRK--QKYDFSEPYIASKAVLIARDSDDSIKSFA 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G     Q+ T+    LA    A       +  +  ++        R DA   D  + 
Sbjct: 138 DLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              K          I+ +  +       I + + E    ++   
Sbjct: 192 LDFKKHKPDAPV-KIVAEQENADYSGVIIRKNEPELLAEINKAL 234


>gi|150395402|ref|YP_001325869.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150026917|gb|ABR59034.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 260

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 85/220 (38%), Gaps = 14/220 (6%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K GI       F    A+G+W+G++++F +A+ +    D       P+       AL S
Sbjct: 27  VKVGIAAEPYPPFTSPDASGNWQGWEIEFMKAMCAEAKLD---CVVTPVAWDGIIPALTS 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ID++  +   T  R+ +  + F    Y    G I  K   I  +   L+G +I VQ  
Sbjct: 84  KKIDMIIGSLSITAERQKT--IDFSDKYYNTPTGIIGAKGDDITPTPEGLAGKTIGVQVS 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +     +F           ++  +E +    A R DA   D  AL A   ++     
Sbjct: 142 TVHQAYAMKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALDAFLESDQGKQC 199

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAM 248
                ++          +   + +G+TE    ++    A+
Sbjct: 200 CDYKGEVAEDVDVIGPGVGVGLRKGETELKEKINAAIKAI 239


>gi|218437188|ref|YP_002375517.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
 gi|218169916|gb|ACK68649.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
          Length = 261

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 11/235 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L +I +RG L  GI   +         GD +GF++D  + L+  I   P  +   P+N  
Sbjct: 32  LDEIMRRGKLIVGIKDNVKPLGFKNEQGDLQGFEIDIAQRLAQEILGSPDALVLRPVNNL 91

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           ER   +    +DI       T  R     +      Y DG G +        S+S ++ A
Sbjct: 92  ERLEVVIEGTVDITIARVTITPSRSRV--VDMSHYYYLDGTGLVTKNPSM-RSLSDVTSA 148

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I +   ++T + +             I     +E       ++ D +  D S L     
Sbjct: 149 RIALLKNSSTIVAIKSELP----NAQLIGVNSYQEALTLLETNQADVFAADNSILAGWVQ 204

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
                 ++ +LP  +S + L+  + +G  ++ ++ +  + A+   +E G  Q+  
Sbjct: 205 DYP---QYRLLPVRLSGAALSIVMPKGL-QYKSLHNRVNEAIARWQESGWLQERA 255


>gi|167840986|ref|ZP_02467670.1| glutamine ABC transporter periplasmic protein [Burkholderia
           thailandensis MSMB43]
          Length = 250

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +++ + ++  +  S +A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTVVAVALVGASLASAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++          +  P++      ALQ++ ID+          R     + F   
Sbjct: 53  DLWAEIAKDAGW---TYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQANDTMIRSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA     +      + N+      +    +S         +G       
Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LAKMKADGRYAKIYKKWFGSEPP 248


>gi|29832942|ref|NP_827576.1| ABC transporter substrate-binding protein [Streptomyces avermitilis
           MA-4680]
 gi|29610063|dbj|BAC74111.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 282

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 87/253 (34%), Gaps = 20/253 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS----ILGDI--KKRGFLKCGINTGLVGF-AEVKANGD 55
           +    +     +L     S++       +  +   K G +    +     F +E+   G 
Sbjct: 10  RILAATTATAGLLLVAGCSSDNGGGKTTVKGVPLVKAGQITTCTHLPYPPFQSEID--GK 67

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +GFDV     ++  +    + +   P    +    L S Q D+ +     T  R+    
Sbjct: 68  VQGFDVSLIDLVAKDLGVKQAIVD-TPFENFKTGAFLNSGQCDVAAAGMTITEERKK--N 124

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    +   Q  ++ KK G+ S++ +   G  +  QA TT E        A +  +  
Sbjct: 125 VDFSDPYFEATQAVLVDKKSGVDSLADVKAKGKKLGAQAQTTGEEY------AKSKGFDA 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + FE  + +    R  +  A   D   +              ++ ++ +       + +G
Sbjct: 179 VSFESSDAVLNGLRTGQVQAVIIDYPVVQGWLKDKANADAFKVVDNLNTGEEYGFTVKKG 238

Query: 234 DTEWYNIVSWTHY 246
           +T+    ++ T  
Sbjct: 239 NTKLLAEINKTIK 251


>gi|322805501|emb|CBZ03065.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Clostridium botulinum H04402 065]
          Length = 262

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 9/245 (3%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67
           + L++    + +  A    +IK+    +K G +     F  +   +   +GF++D    +
Sbjct: 1   MSLVVALGVALTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGFEIDIWEEI 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
                  P    +   +       L + +ID ++     T   +      F     + G 
Sbjct: 61  GKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSKPYVYSGV 115

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
                K    I S+  L G ++  Q GT    ++ DY   +         +     +   
Sbjct: 116 QLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYNSFSGMFQD 175

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               R DA   D  A       +    +    P    ++         + E    ++   
Sbjct: 176 VDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEKIEKINKAL 235

Query: 246 YAMVT 250
             M  
Sbjct: 236 DDMKN 240


>gi|270158881|ref|ZP_06187538.1| amino acid ABC transporter periplasmic amino acid binding protein
           [Legionella longbeachae D-4968]
 gi|289166334|ref|YP_003456472.1| glutamine-binding periplasmic protein precursor [Legionella
           longbeachae NSW150]
 gi|269990906|gb|EEZ97160.1| amino acid ABC transporter periplasmic amino acid binding protein
           [Legionella longbeachae D-4968]
 gi|288859507|emb|CBJ13468.1| putative glutamine-binding periplasmic protein precursor
           [Legionella longbeachae NSW150]
          Length = 243

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 18/197 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  +  S         KK  +L    +     F      G+ KGFD
Sbjct: 1   MDKLINLVFIVFCFLLCSCESN--------KKEQYLHFATSAVYPPFEYS-ERGEIKGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +     +  +       A+ S Q DI       T  R+      F  
Sbjct: 52  IDLAKLIAKELGKEA---VFDNMQFSTVLPAISSGQDDIAIATITITEARK--NNFDFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             YFDG   +    + + S +QL G  + VQ G+  E+ L + F          V +   
Sbjct: 107 PYYFDGIASVYRSNQPVMSQNQLKGKKVAVQLGSIMEIWLRETFP----DIEITVLDNNN 162

Query: 181 EIDAAYRAHRCDAYTGD 197
           +   +  + R D    D
Sbjct: 163 QAVESLISGRVDVVLMD 179


>gi|257455731|ref|ZP_05620959.1| extracellular solute-binding protein, family 3 [Enhydrobacter
           aerosaccus SK60]
 gi|257446859|gb|EEV21874.1| extracellular solute-binding protein, family 3 [Enhydrobacter
           aerosaccus SK60]
          Length = 306

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 11/204 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++         F+  KA+G   GFDVDF RAL + +    +  +  P +       L 
Sbjct: 54  KTIRIATEGTYKPFSITKADGSLTGFDVDFIRALCAEM---KANCEIKPQDWDGLLPGLM 110

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQ 151
           +K+ D++      T  R+    + F    + +   F+  +   I+    +Q+   ++  Q
Sbjct: 111 AKKYDVVIDAMSITPERQA--QVDFTDPYFTNTLVFLTKQGSPINPDDPAQIDSHTVAAQ 168

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T +      + + ++ K    ++E ++       A R D    D +       T +  
Sbjct: 169 RSTLS----TQWMEKNHPKAQLNLYEGLDNAFMDLAAGRSDLMISDKAPAAYWLTTPEGK 224

Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235
              +   +I     +   + +GD 
Sbjct: 225 GFEIKGKEIDVNDKMGIIVRKGDP 248


>gi|300309582|ref|YP_003773674.1| amino acid ABC transporter/signal transduction system periplasmic
           binding protein [Herbaspirillum seropedicae SmR1]
 gi|300072367|gb|ADJ61766.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic binding protein [Herbaspirillum seropedicae
           SmR1]
          Length = 269

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 71/233 (30%), Gaps = 10/233 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  L  I     L+  I+  +  ++         G DV+  + ++     +   +    
Sbjct: 27  QADQLDTILAAKKLRVAIDLAVPPYSMKDDKLRLIGSDVETAQRMAKDFGLELEVVP--- 83

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                R   LQ+ + DI+      T  R     + F              +   I+S + 
Sbjct: 84  TTLTNRVPYLQTNKADIVISAFSITPERAKV--IDFSVPYAPILVVVGAPRSMKITSPAD 141

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+G  I    GTT +  L     +         F+       A  + + D +      L 
Sbjct: 142 LAGKKIIATRGTTNDQELTKIAPS---SATITRFDDDATSMTAMVSGQADIWATSPMLL- 197

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +    PS  +     +  + LA  + +G+      +       ++  EL 
Sbjct: 198 -KVVNQKNPSRDIESKLTLKANLLAVGLRKGEPRLKEKIDGWIRTNLSNGELN 249


>gi|227505030|ref|ZP_03935079.1| extracellular solute-binding protein [Corynebacterium striatum ATCC
           6940]
 gi|227198394|gb|EEI78442.1| extracellular solute-binding protein [Corynebacterium striatum ATCC
           6940]
          Length = 301

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 87/277 (31%), Gaps = 32/277 (11%)

Query: 1   MYKDFFVS---ILCLIILFFTSFSTNASI--------LGDIKK--------RGFLKCGIN 41
           MYK    S   + C ++      +  +S         L  + +         G L  G N
Sbjct: 10  MYKKIAASGGLLACAMLAAGCVTNVESSTPDGWEEPHLDKVPEIAALYDDADGVLTAGTN 69

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                F    ++G   G ++D  +A++  +  +   ++    +      A+QS QIDI +
Sbjct: 70  PPFAPFEFKDSDGAIVGVEMDMMKAIADILGLEFQPVE---QDFSMILPAVQSGQIDIGA 126

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-TL 160
                   R       F    Y   Q             S   G ++ VQ  T +E   +
Sbjct: 127 SGFTDNEERRK--NFDFIDHLYAGIQWAERTDGIKRVDPSNPCGLTVAVQRTTVSETDDV 184

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA--LYALKLTNDRPSEHVILP 218
                A       + ++  +    A    R DA + D         +          ++ 
Sbjct: 185 IPKKDACGGDLRILSYDTSDNAALAVIMGRADAMSADSPVSSWAVNRSDGK----MRMVG 240

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D+   +P   A+ + D++    V+     ++   E  
Sbjct: 241 DMFDAAPYGFAVPK-DSKLGPAVAAALNHLIETGEYQ 276


>gi|126444872|ref|YP_001063871.1| amino acid ABC transporter periplasmic protein [Burkholderia
           pseudomallei 668]
 gi|126224363|gb|ABN87868.1| ABC-type amino acid transport/signal transduction system, domain
           protein [Burkholderia pseudomallei 668]
          Length = 240

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 6/219 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
           +A  L  I     +        V F  +       GF  D   A+       +     +I
Sbjct: 15  HAQTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y+P+  + R   L +   D+   +T  T  R     ++F    ++ G   ++ K   I 
Sbjct: 75  AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSISLFYAGTRVLVKKASRIR 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G ++   AG+T+E  +  Y   H++    +  +          + R      D 
Sbjct: 133 GYADLAGKTVATAAGSTSENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             L+ ++     P    +  D +   P    + +GD   
Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|323465692|gb|ADX69379.1| Glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus H10]
          Length = 494

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 86/264 (32%), Gaps = 29/264 (10%)

Query: 1   MYK----DFFVSILCLIILFF-----TSFS----TNASILGDIKKRGFLKCGINTGLVGF 47
           M K    + F+  + +I   F      + +     + S++  IK+   L  G +      
Sbjct: 1   MKKAKIVNLFLVFITIISTLFLFNQPVAAADKKVASDSVMKKIKQTKELVVGTSADYPPL 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                V  N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +   +G ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSQIYYKPSGEYFLINKRDQTKYKKIKDFAGQTVGAQTGSIQYQLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K    K       ++  +  A ++ +      +          ND     V      
Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTAKAYAKNDNSLMAVRSDLRE 230

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
            ++  A AI +G       V+ T 
Sbjct: 231 EQAGNAVAIAKGQPGLVKAVNKTI 254


>gi|300690981|ref|YP_003751976.1| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Ralstonia solanacearum PSI07]
 gi|299078041|emb|CBJ50683.2| glutamine transporter subunit ; periplasmic binding component of
           ABC superfamily [Ralstonia solanacearum PSI07]
          Length = 248

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 78/235 (33%), Gaps = 20/235 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L+   F S +  A           L    +T  V F   + N  + GFD
Sbjct: 1   MKFAAKLVAAVLVAASFASQAARAET---------LLVACDTAFVPFEFKQGN-QYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++     D    +  P++      ALQ++ +D           R+    + F  
Sbjct: 51  IDLWKEIAKDARIDY---KLQPMDFNGILPALQTRNVDAALAGITIKDERKKI--VDFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G   ++     I S   L G S+ ++ GT+     ADY KAH        F  ++
Sbjct: 106 GYYDSGFMLMVPAASTIKSADDLKGKSLAIKTGTSA----ADYAKAHFTGTELRQFPNID 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                    R DA   D   +     T  +     +   +++      A  +G  
Sbjct: 162 NAYLELATGRVDAAMHDTPNVLYYINTVGKGRVKAVGQQMMAHQ-YGIAFPKGSP 215


>gi|218284063|ref|ZP_03489891.1| hypothetical protein EUBIFOR_02494 [Eubacterium biforme DSM 3989]
 gi|218215385|gb|EEC88923.1| hypothetical protein EUBIFOR_02494 [Eubacterium biforme DSM 3989]
          Length = 253

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 87/258 (33%), Gaps = 24/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L  L     S+ +    D+K    +  GI+     +      GD  GFD
Sbjct: 1   MKKIIKLGMAALTALTMAGCSSES---EDVK---TITVGISPDYAPYESENKKGDIVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQY----LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            D  +        D   + Y      ++       LQ  QID+      +    +    +
Sbjct: 55  PDMMKCF-EEYLSDEEGVTYKLEMKKMDFDNIITQLQGDQIDVGISGFTY----DSKRKV 109

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            +        Q  ++     I+SVS L G S+  Q G T E    +   A       +  
Sbjct: 110 EWSDPYLGSSQVAVVPNDSEIASVSDLEGKSLVAQTGATGETAAKEVKDAKVTGLKNVQ- 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               +I  A  A++ DA   D+     +     +  E  +L + +          +G+T+
Sbjct: 169 ----DIMNALSANQYDAAIVDL----GVAKNYVKSGEFKMLDESLMDEQNYIIAKKGNTD 220

Query: 237 WYNIVSWTHYAMVTAEEL 254
             + ++      + +++ 
Sbjct: 221 VIDKMNTCIKKFLASDDY 238


>gi|254229978|ref|ZP_04923379.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio
           sp. Ex25]
 gi|262392808|ref|YP_003284662.1| cyclohexadienyl dehydratase [Vibrio sp. Ex25]
 gi|151937480|gb|EDN56337.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio
           sp. Ex25]
 gi|262336402|gb|ACY50197.1| cyclohexadienyl dehydratase [Vibrio sp. Ex25]
          Length = 258

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 73/245 (29%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L + +L  T  +   S L  I   G L+ G                 ++GF
Sbjct: 1   MKKILL--ALGMCLLAATQIAHAESRLQSILDSGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  +        +    GT  E  + ++F         IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFNTPDVKVAATLGTVQEKMVKEFFPLAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V +      +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVDKFKQ-LAIVPVTAPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|325830412|ref|ZP_08163869.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella
           sp. HGA1]
 gi|325487879|gb|EGC90317.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella
           sp. HGA1]
          Length = 280

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 79/237 (33%), Gaps = 16/237 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
                TS +     L      G L    +     F  +  +   +GF VD    L+  + 
Sbjct: 44  TTTSSTSGNDAGYTL---VNDGKLTVAASLDFPPFENLNGD-KPEGFAVDLMTLLAEEMG 99

Query: 73  DDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
            +   +             +Q+  + D+   +   T  R     + F        Q   +
Sbjct: 100 LECEYLP--STKFDTIVPLIQTGGKADVGVSSFTITDKR--LQQVDFTDPYCNVNQSITV 155

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
               GI+ V+QL G  I  Q+GTT     A+  K          ++ +  + AA  + + 
Sbjct: 156 RSDSGITDVAQLEGKKIGAQSGTTGYEWAAENIK----DAEVTGYDEMTAVFAALDSGQI 211

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           DA + D+        +        ++ +I +    A A+ + + E    ++    A+
Sbjct: 212 DAVSVDLPVANYYVRSYSDCQ---VIKEIPTGEQYAVAVSKENPELTKALNKALQAV 265


>gi|294785618|ref|ZP_06750906.1| CjaC protein [Fusobacterium sp. 3_1_27]
 gi|294487332|gb|EFG34694.1| CjaC protein [Fusobacterium sp. 3_1_27]
          Length = 243

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 89/257 (34%), Gaps = 24/257 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + ++ L+ +  +             K   +  G N     F  ++ +    GFD
Sbjct: 1   MKKFFKLMLMSLLSVVISVSVFA--------KSNVIYVGTNAEFAPFEYLEKD-KIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K++D++      T  R+    +AF  
Sbjct: 52  IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKVDMVIAGMSATPERQK--AVAFSK 106

Query: 121 ITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +   Q  I    K K + S   LSG  + V  G T +  +++             F  
Sbjct: 107 PYFKAKQVVITTPEKAKSLKSFKDLSGKKVGVMLGFTGDTVVSEI-----KGVKVERFNA 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 A   ++ DA   D     A K T +   + VI      +   A A  + D E  
Sbjct: 162 AYAAILALSQNKVDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELI 218

Query: 239 NIVSWTHYAMVTAEELG 255
           N V+     + +  E  
Sbjct: 219 NKVNAALDKIKSNGEYD 235


>gi|330861367|emb|CBX71602.1| histidine-binding periplasmic protein [Yersinia enterocolitica
           W22703]
          Length = 228

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 12/214 (5%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           ++ G   F  +  +G+  GFD+D   AL   +    +K  ++    +    AL +++ D 
Sbjct: 1   MDGGYPPFDVLAPSGEITGFDIDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDA 57

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTEL 158
           +  +   T  R+    + F    Y      +  K   +   V+ L G ++ VQ G+  E 
Sbjct: 58  IIASLSITDERKK--EVDFTDRYYRSAAQLVARKGSPLSPDVASLKGKTVGVQTGSIHET 115

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
               ++         + +   + +     + R +A   D     +  +   R  +     
Sbjct: 116 YAKKHWG--GQGVKIVSYANQDNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAG 173

Query: 219 DIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
            +I    +      A+ + +    + ++    A+
Sbjct: 174 PVIQDETISSDVGIAVGKDNPALRDALNGAIKAI 207


>gi|52078835|ref|YP_077626.1| putative extracellular solute-binding protein YckB [Bacillus
           licheniformis ATCC 14580]
 gi|52784206|ref|YP_090035.1| YckB [Bacillus licheniformis ATCC 14580]
 gi|319648871|ref|ZP_08003080.1| YckB protein [Bacillus sp. BT1B_CT2]
 gi|52002046|gb|AAU21988.1| putative extracellular solute-binding protein YckB [Bacillus
           licheniformis ATCC 14580]
 gi|52346708|gb|AAU39342.1| YckB [Bacillus licheniformis ATCC 14580]
 gi|317388865|gb|EFV69683.1| YckB protein [Bacillus sp. BT1B_CT2]
          Length = 291

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 73/258 (28%), Gaps = 17/258 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN- 53
            +   +  +  + L   + ST  +          +IK++G +    +  L   +    + 
Sbjct: 8   KRITLLITVLALALITAACSTAQNKAENKKTAWDEIKEKGKIVVATSGTLYPTSYHDTDS 67

Query: 54  --GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G++V+  R  +  +  D   +++  +       A+ S Q+D  + +   T  R+
Sbjct: 68  GKDKLTGYEVEVIREAAERLDLD---VEFKEMGFDGMLTAVGSGQVDAAANDITMTDDRK 124

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +      F           GI ++  L G      A T       D  + +  + 
Sbjct: 125 EKFLFSTPYKYSFGTAIVRKKDLSGIHTLEDLKGKKAAGAATTVYM----DIARKYGAEE 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                   ++        R D    D                 +              + 
Sbjct: 181 VIYDNATNDQFLKDVANGRTDVILNDYYLQKLALAAMPDLDLTIHPDLKYYPHQQGMIMK 240

Query: 232 QGDTEWYNIVSWTHYAMV 249
           +G+TE       T   M+
Sbjct: 241 KGNTELKKQFDKTIDEML 258


>gi|320332698|ref|YP_004169409.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM
           21211]
 gi|319753987|gb|ADV65744.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           maricopensis DSM 21211]
          Length = 256

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 14/235 (5%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S   +A+ L DIK+ G L+         F   K      GF+V+   A++  +   
Sbjct: 16  VVTGSLHAHANTLADIKRTGVLRLATEGNYTPFNYYKGK-TLTGFEVELGNAIAKQLGVK 74

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
               Q+     +   + LQ  + D++  +   T  R+    + F    ++   G ++ K 
Sbjct: 75  A---QWTTNVFESLLIGLQQNKYDLVIASHGITPERQA--AVDFSAP-HYCSGGILVSKP 128

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            G  +V+ L G  + +   T+    +               F    +   A  A R D  
Sbjct: 129 GGPRTVADLKGKIVTMGVNTSYLQYVQRLPGIR----AVKTFPTTNDQLNAVLAGRADTM 184

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             D               +   L D+I    +  A+ + +T+  + V+    A++
Sbjct: 185 VLDRFNAIDASKALPGKLQ---LGDVIFPERIGMAMSKRNTQLVSAVNAALAAVM 236


>gi|121609557|ref|YP_997364.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121554197|gb|ABM58346.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 265

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 77/229 (33%), Gaps = 11/229 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            + +I KRG L   I+T    + ++ A+   +G DV     ++  +      ++ +P+ +
Sbjct: 29  TVDEIIKRGKLLVAIDTNNPPWGQMNASMQPEGIDVGVANLMAKYMG---VPLEIVPVTS 85

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           + R   + + + D++      T  R  +L + +           +      I S   L+G
Sbjct: 86  QNRIPFIVTGKADVVMATLTITPQR--ALQIWYSIPYALQDSVIMTTDNSPIKSFDDLNG 143

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + V  G   +  +        M+     F+       A  A + DA           +
Sbjct: 144 KRVSVVRGAIQDALVTRMAPRAQMQ----RFDNDASTIQALVAGQVDASATGFLIPA--Q 197

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            T   P +  +    +    +   + +   +     +   Y +    EL
Sbjct: 198 TTKANPGKTYVSRLKLGTQHIGIGMKRNSPDLLQWTNTFIYHIRANGEL 246


>gi|299541804|ref|ZP_07052127.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725542|gb|EFI66183.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus
           fusiformis ZC1]
          Length = 260

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 81/245 (33%), Gaps = 17/245 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K F + +  ++    +       +    ++  +       +     F+ +  +    GFD
Sbjct: 5   KKFLLVLSTIVACMLSGCGEKQKLEDGSELINKNQFVFATSGEFKPFSYINDDLTMSGFD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A++  +  +P + +      K     +++ + D    +      R     ++F  
Sbjct: 65  IEVGEAIAKEMGLEPVQKRIK---FKGIVEGVKTGRADAAVASHTINPQRSKH--VSFST 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+ G          I +V  L G  + V  G+T   T      A     +   ++   
Sbjct: 120 PYYYSGPKIFTRPDSKIRTVEDLEGKEVAVAKGSTYADT------ASKYTDNIKTYDSDI 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  + R DA   D         T ++    +    +I++S  A  + Q + +    
Sbjct: 174 TALKALSSGRHDAVITDFVTG----KTAEKEGFKIKGQQLINRSEQAIVLPQDNPKLLKR 229

Query: 241 VSWTH 245
           V+ + 
Sbjct: 230 VNESL 234


>gi|222102583|ref|YP_002539622.1| ABC transporter substrate binding protein (nopaline) [Agrobacterium
           vitis S4]
 gi|221739184|gb|ACM39917.1| ABC transporter substrate binding protein (nopaline) [Agrobacterium
           vitis S4]
          Length = 257

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 14/230 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK  G  K G       F     +G   GFDV+   A+++ +        ++  
Sbjct: 24  GENLATIKSAGVFKIGTEGTYAPFTYHNESGKLVGFDVEIGEAIAAKLGVKAE---FVEG 80

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQ 142
                   L +K+ D +      T  R       F           I+      I   + 
Sbjct: 81  KWDGLIAGLDAKRYDTVINQVGITETR--KQKYDFSDPYIASKAVLIVRSDDNNIKDFAD 138

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G     Q+ ++    LA+   A       +  +  ++        R DA   D  +  
Sbjct: 139 LKGKKSA-QSLSSNFGKLAEKSGA-----ELVGTDGFDQSIQLVLTRRADATINDSLSFL 192

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             K          ++            I + + E    ++    A + A+
Sbjct: 193 DFKKHKPDAPV-KVVAQQSDADYSGVIIRKQEPELLTAINKAL-ADIKAD 240


>gi|206561500|ref|YP_002232265.1| putative periplasmic lysine-arginine-ornithine-binding protein
           [Burkholderia cenocepacia J2315]
 gi|198037542|emb|CAR53479.1| putative periplasmic lysine-arginine-ornithine-binding protein
           [Burkholderia cenocepacia J2315]
          Length = 258

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++  +      ALQ+
Sbjct: 25  TLRFGIEAAYPPFESKTPAGQLQGFDVDVGNAVCAKL---NMKCVWVENSFDGLIPALQA 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+    + F P  Y      +      +   V+ L G  + V  G
Sbjct: 82  RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAKHGSPLKPDVASLRGKHVGVLQG 139

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++ +  +    + ++  ++I A   A R DA   +        L      +
Sbjct: 140 SSQEDFLKAHWASAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 197

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + + D      +     A+
Sbjct: 198 YQIVGEPLKDPATLGEGTGFGMRKNDKALQAKIVGALDAL 237


>gi|330432499|gb|AEC17558.1| cystine transporter subunit [Gallibacterium anatis UMN179]
          Length = 270

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 12/241 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
               L       ++    A +   +  +G +  G       F     +G   G+DV+  R
Sbjct: 16  LGFALAQSAFALSNEEAAADLAKRVNDKGTIVVGTEGTYPPFTYHDESGKLTGYDVELTR 75

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +++ +      +++           L + + D+++     T   E            + 
Sbjct: 76  LVANELGVK---VEFKETQWDAMLSGLNNHRFDLVANQVALT-TPERRAKYDKSLEYSYS 131

Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           G   +  K  + I   + L G     Q+ T+    LA    A       +  + + +   
Sbjct: 132 GAVAVARKGDQRIKDWADLKGLKSA-QSFTSNYGELATKNGA-----EIVGVDGLAQALQ 185

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
               +R D    D  A+      +   +  +IL D            +G+      V+  
Sbjct: 186 LVLQNRADVTLNDRLAVLDFLHKHPNANLEIILRDKNQLGS-GFIFNKGNAAVIEKVNAA 244

Query: 245 H 245
            
Sbjct: 245 I 245


>gi|54293480|ref|YP_125895.1| hypothetical protein lpl0529 [Legionella pneumophila str. Lens]
 gi|53753312|emb|CAH14759.1| hypothetical protein lpl0529 [Legionella pneumophila str. Lens]
 gi|307609294|emb|CBW98770.1| hypothetical protein LPW_05691 [Legionella pneumophila 130b]
          Length = 244

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 13/228 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K +  L+   +     F  +  NG+ KGFD+D  + ++  +  +     +  +       
Sbjct: 23  KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSTVLP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           AL S Q D+       T   E      F    YF+G   +    + +  +SQL+G  I V
Sbjct: 79  ALNSGQDDVAIATITITE--ERKKNFDFSIPYYFEGMAAVFDISQPVKEISQLTGKKIAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q G+  E+ L   F            +   +   A  A   D    D +           
Sbjct: 137 QLGSVMEIWLHQNFP----NAEITALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
              + IL            + +       I S         E   +  
Sbjct: 192 GLSYSILAKAN--EGYGLVLRKDSPLRDEINSALENLKAKGEIQKLES 237


>gi|254473347|ref|ZP_05086744.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
 gi|211957463|gb|EEA92666.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
          Length = 258

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 67/190 (35%), Gaps = 19/190 (10%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F ++  L +L  T                 ++ G       FA   A+G   GF+++   
Sbjct: 6   FATVATLALLASTQVQAKEWT--------KVRIGTEASYPPFAYTTADGKLVGFEIELGN 57

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL + +  +    +++P++       L + + D +  +   T  R     + F    Y  
Sbjct: 58  ALCAELKVE---CEWMPVDWDGLIPGLVAGKYDTIMASMSITPER--KQRIQFSEKYYQT 112

Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G  + K   I+  SV  + GA +  Q G T  +   D       K    ++   +E  
Sbjct: 113 PPGVAVPKDSKITEASVEGMDGALVGAQVGATHAVFAEDIL----TKSEVSLYPTADEYK 168

Query: 184 AAYRAHRCDA 193
               + R DA
Sbjct: 169 LDLESGRLDA 178


>gi|300811214|ref|ZP_07091721.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497801|gb|EFK32816.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 485

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 21/247 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK----GFDVD 62
           VS+L   +      +  AS       +     G +     F     +G +     G D++
Sbjct: 14  VSLLIAALFLTAPKAQAAS-------KKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIE 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++     +  K +   ++      ALQS QID +      T  R+ +  + F    
Sbjct: 67  ILREIAK---HENFKYELKIMSFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSY 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y DG    + K   I+S+  L G ++ V+ GTT+ +      K +  K     +      
Sbjct: 122 YTDGVCLAVAKDSKITSMKDLKGKTVNVKTGTTSAIYAKSIQKKYGFK--LKYYTNSNTS 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A  ++   DA   D     +L+      +   I+   +S +PLA A+ +G+ +    + 
Sbjct: 180 WADVKSGNADACFDDGP---SLRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMF 236

Query: 243 WTHYAMV 249
               A +
Sbjct: 237 NDGLAWL 243


>gi|283458864|ref|YP_003363510.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Rothia mucilaginosa DY-18]
 gi|283134925|dbj|BAI65690.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Rothia mucilaginosa DY-18]
          Length = 281

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 74/253 (29%), Gaps = 22/253 (8%)

Query: 5   FFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53
              + L        + S              ++L  IK  G ++ G+      +    A+
Sbjct: 16  LLGAALAGTTGLLAACSGGNGSSAGSAQSSSNLLESIKSAGKIRIGVEGTYRPYTYHDAS 75

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+ D    L+  +        Y+          + + + DI+  N   T  R+  
Sbjct: 76  GKLAGFEYDIAETLAKDLGVTAE---YIETPWDSLIAGVDAGRYDIVLNNVAPTEERKK- 131

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F            + K   + + S++SG S    A +     + +           
Sbjct: 132 -KYDFSVPYAHSRARVGVKKDSSLKNASEISGHSAAQSATSNYRKLVEE------RGATI 184

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I     +E        R +    D  +       +   +  ++  ++   + +A  + + 
Sbjct: 185 IEVTGFDEAIEQVLTGRAELTANDSVSFAEYFKEHPDANLRLLEGEVGPGTNVAVLLPKN 244

Query: 234 DTEWYNIVSWTHY 246
            T   + +  +  
Sbjct: 245 QTALKDAIDASIK 257


>gi|157164888|ref|YP_001466154.1| solute-binding family 1 protein [Campylobacter concisus 13826]
 gi|112800377|gb|EAT97721.1| L-cystine-binding protein TcyA [Campylobacter concisus 13826]
          Length = 250

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 73/247 (29%), Gaps = 20/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F ++L ++ +   + +  A  + D    G L          F       +  G+D
Sbjct: 1   MK---FTNLLKVVAVLAMALNLQAKTIKD----GVLTVATEGNYAPFTFYNDKNELVGYD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R ++  +     K+++L         A  + + D++      T  R+     AF  
Sbjct: 54  VDIARVVAQKL---NLKVEFLTAPWDAMLAAFDAGKADVVFNQVSITDERKK--KYAFSV 108

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K    I S + L G      A +           A       +V +  
Sbjct: 109 PYTVTFGAIITRKDNNDIKSFADLKGKKDADSATSNWAKV------AVKYGAEHVVTDSF 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      + R DA   D    Y             I   +  K   A A+ + + E   
Sbjct: 163 AKSMELLISRRVDAVVRDNIVFYDFIKERPNAPV-KIAASLDEKDYTAAAVKKDNAELAE 221

Query: 240 IVSWTHY 246
            +S    
Sbjct: 222 QISNALN 228


>gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
 gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
          Length = 473

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 90/291 (30%), Gaps = 41/291 (14%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             ++++  I+L  T+ +   +             G +     F     +G++KG DVD  
Sbjct: 4   LLLTVIFTILLPGTASAQETN--------KTYIIGTDVTFAPFEYKDVDGEYKGIDVDLL 55

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A++     +       PL       AL+S QID +      T  R       F    + 
Sbjct: 56  DAIAKDQGFNYE---LRPLGFSAALQALESNQIDGMIAGMSITPER--QESFDFSDPYFE 110

Query: 125 DGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            G    +      I+S   L G ++ V+ GTT              + +   FE    + 
Sbjct: 111 SGVVMAVSESNDEITSYEDLEGKTVAVKVGTTGAAFAESIQDEFGFELN--TFEDSANMY 168

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNI 240
                   DA   D   +     +       + L   +   P      A+ +G       
Sbjct: 169 EDVLTGNSDAAFEDYPVMAYAIQS------GLGLKLTMDPEPGDNYGFAVNKGQ------ 216

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
                     AE L +    +  +  + T  ++   +LG   + N    LG
Sbjct: 217 ---------NAELLEMFNNGLINIRANGTYDEIMDTYLGDTSTKNDSANLG 258


>gi|145591541|ref|YP_001153543.1| extracellular solute-binding protein [Pyrobaculum arsenaticum DSM
           13514]
 gi|145283309|gb|ABP50891.1| extracellular solute-binding protein, family 3 [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 249

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 73/231 (31%), Gaps = 14/231 (6%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            +  IK RG L  G +     +  +   G   G D++  + ++ ++      ++   +  
Sbjct: 19  SIDTIKARGKLVVGTSADWPPYEYI-EGGKVVGIDIEIAKRIADSLG---VGLEVRDMKF 74

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                A++   +D++  +   T  RE    + F      D    I  +   +     L G
Sbjct: 75  SALIEAVKRGDVDVVLADMAITPERET--QVLFSIPYQVDTSVVIAKRGAAMRGPEDLKG 132

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALYAL 204
            ++ VQ GT  E       +        + +++    +  A R    DA         A+
Sbjct: 133 RAVGVQVGTVQEDWA---LRTLGNVSKIVRYDKVYPYMVEALRKGDVDAIVVGGVVGRAI 189

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                       +         A A+     +    V    Y M+ + E+ 
Sbjct: 190 VTRFPE----FEIVASTGVRYSAVAMPSCAYDLKLQVDRVIYDMLQSGEME 236


>gi|317489458|ref|ZP_07947968.1| bacterial extracellular solute-binding protein, family 3
           [Eggerthella sp. 1_3_56FAA]
 gi|316911387|gb|EFV32986.1| bacterial extracellular solute-binding protein, family 3
           [Eggerthella sp. 1_3_56FAA]
          Length = 267

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 79/237 (33%), Gaps = 16/237 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
                TS +     L      G L    +     F  +  +   +GF VD    L+  + 
Sbjct: 31  TTTSSTSGNDAGYTL---VNDGKLTVAASLDFPPFENLNGD-KPEGFAVDLMTLLAEEMG 86

Query: 73  DDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
            +   +             +Q+  + D+   +   T  R     + F        Q   +
Sbjct: 87  LECEYLP--STKFDTIVPLIQTGGKADVGVSSFTITDKR--LQQVDFTDPYCNVNQSITV 142

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
               GI+ V+QL G  I  Q+GTT     A+  K          ++ +  + AA  + + 
Sbjct: 143 RSDSGITDVAQLEGKKIGAQSGTTGYEWAAENIK----DAEVTGYDEMTAVFAALDSGQI 198

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           DA + D+        +        ++ +I +    A A+ + + E    ++    A+
Sbjct: 199 DAVSVDLPVANYYVRSYSDCQ---VIKEIPTGEQYAVAVSKENPELTKALNKALQAV 252


>gi|290961426|ref|YP_003492608.1| solute-binding protein [Streptomyces scabiei 87.22]
 gi|260650952|emb|CBG74070.1| putative secreted solute-binding protein [Streptomyces scabiei
           87.22]
          Length = 283

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 81/228 (35%), Gaps = 13/228 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  T A  +  +K  G L    +     F +E+   G  +GFDV     ++  +      
Sbjct: 36  ATKTAAGGVELVKA-GQLTTCTHLPYPPFQSEID--GKVQGFDVSLIDLVAQDLGVKQE- 91

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I   P    +    L S + D+ +     T  R+    + F    +   Q  +  KK GI
Sbjct: 92  ILDTPFENFKTGAFLNSGECDLAAAGMTITDERKK--NVDFSDPYFEATQAVLADKKAGI 149

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           SS + L G  +  QA TT E    DY K+  +    + FE  + +    R  + DA   D
Sbjct: 150 SSFADLKGKKVGTQAQTTGE----DYAKSKGIDS--VSFESSDAVLNGLRTRQVDAVIID 203

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +          +   +   I +       + +G+T+    +    
Sbjct: 204 YPVVQGWLKDKANAAAFEVAEQINTGEQYGFTVRKGNTKLLAAIDKAL 251


>gi|187779935|ref|ZP_02996408.1| hypothetical protein CLOSPO_03531 [Clostridium sporogenes ATCC
           15579]
 gi|187773560|gb|EDU37362.1| hypothetical protein CLOSPO_03531 [Clostridium sporogenes ATCC
           15579]
          Length = 269

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 76/267 (28%), Gaps = 21/267 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAE 49
           M+K         + C++           S           +K  G L  G+      F  
Sbjct: 1   MFKKKVLNVLFMMACILSFTLVGCGQKTSSSNEKDSSYSKVKDNGKLVVGLCAQYPPFES 60

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                   +GFDVD  + L   +     K++      +     +     D+L        
Sbjct: 61  RNDKTSKIEGFDVDLAKELGKEM---NLKVEIKDAEWEALLGGVSKGDYDVLITCMSKKE 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
             + ++  +       D    +      I +   L G  + VQ  T++E  +       +
Sbjct: 118 AAQANINTSDTY-YKLDDIIVVNKNNNSIHNKDDLKGKVVGVQTSTSSEQVV----DKLD 172

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  + R  E     + +R +A      A     + + +     I+   +  S +  
Sbjct: 173 EIKEIKRYNRNPEAFIDLKNNRINAVVVG-YAYATTAMKDKKDDNLKIINSPVGSSDIVM 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +G  +    ++     +  + +  
Sbjct: 232 VTKKGSNDLTKELNKALKKVKESGKYE 258


>gi|163744466|ref|ZP_02151826.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Oceanibulbus indolifex
           HEL-45]
 gi|161381284|gb|EDQ05693.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Oceanibulbus indolifex
           HEL-45]
          Length = 257

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 74/202 (36%), Gaps = 21/202 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61
           K    + L   I+   + +              +K GI       FA + A+G+W+G++V
Sbjct: 4   KKLMTTALATAIVSAGAVAAE-----------EVKIGIAAEPYPPFASLNASGEWEGWEV 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A+ +A   D       P+       +L  +Q+D +  +   T  R     + F   
Sbjct: 53  EVINAVCAAAELD---CVITPVAWDGIIPSLTGQQVDAIMASMSITEER--QQTIDFSDP 107

Query: 122 TYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y      +  K   I  +   L+G  I +QA T  +    +YF          V++  +
Sbjct: 108 YYNTPAVIVADKSMDIEPTPESLAGKIIGIQASTIHQAYANEYF---GDAAEIRVYQTQD 164

Query: 181 EIDAAYRAHRCDAYTGDISALY 202
           E +    + R DA   D  A+ 
Sbjct: 165 EANQDLVSGRIDATQADSIAMA 186


>gi|259418412|ref|ZP_05742330.1| extracellular solute-binding protein, family 3 [Silicibacter sp.
           TrichCH4B]
 gi|259345807|gb|EEW57651.1| extracellular solute-binding protein, family 3 [Silicibacter sp.
           TrichCH4B]
          Length = 277

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L L   F T+ +              +  G++ G   F  VK + + +GF+
Sbjct: 28  MKKQIAITALTLATAFGTAHAE------------TINVGMSGGYFPFTFVKLD-ELQGFE 74

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++        ++ ++ ++      AL+S +ID ++     T  RE     +   
Sbjct: 75  VDVINAIAEETG---DEVNFVTMSFSGLIGALESGRIDTIANQITITPEREQKFAFSQPY 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +            +  I + S LSG S+ V  G+  E  L      +  +     +E   
Sbjct: 132 VYDGAQVVVKRGNEDTIKNTSDLSGKSVAVNLGSNFEELLNTL--PNASEIEIRTYESNI 189

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
             D A    R DA+  D  +   L   +  P      P    ++    A+     E    
Sbjct: 190 AQDTAL--GRVDAFVMDRVSSAQLISESPLPLALAGSPFSEIRN----ALPFRTDENGIA 243

Query: 241 VSWTHYAMVT 250
           +     A +T
Sbjct: 244 LRDKFDAALT 253


>gi|134278238|ref|ZP_01764952.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 305]
 gi|134250022|gb|EBA50102.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia pseudomallei 305]
          Length = 259

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 92/258 (35%), Gaps = 24/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F   +   ++  T+F+ ++           L+ G+      F     NG  +GFD
Sbjct: 1   MKRRHFWLAIWCELVSLTAFADSS----------TLRFGLEAQYPPFESKAPNGTLQGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ +         +++  +      ALQ ++ D ++   + T  R     + F  
Sbjct: 51  IDLGNAVCA---TAHLTCKWVETSFDGLIPALQGRKFDAINSAMNATEKR--RQAIDFTT 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      I     G ++++  L G  + V   +  E     +++   +    + ++  
Sbjct: 106 VIYRVPTQLIARSGSGLVATLESLKGKHVGVLQASIQETYAKAHWEPDGVS--VVAYQDQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            ++ A   A R DA      A     L+         + + +         +A  + +GD
Sbjct: 164 NQVYADLVAGRLDATLVLAPAGQKGFLSQPNGKGFAFVGEPVRDDKILGSGIAFGVRKGD 223

Query: 235 TEWYNIVSWTHYAMVTAE 252
               N ++    A + A+
Sbjct: 224 ESLRNRLNTAI-AKIEAD 240


>gi|167033584|ref|YP_001668815.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166860072|gb|ABY98479.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 279

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F ++ +   +      +   + L  I +   +           + +  +   KGFD+D
Sbjct: 6   RLFALTAVAGSLTLMAGAAWAGATLDRIHQSKVMNVATAANWPPQSFLGEDNTLKGFDID 65

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   +    +++ ++            + + D+   +   T  R     L F  I 
Sbjct: 66  VANEIGKRLG---TQVAFVTPEYGIITAGRWASRWDLSVGSMTPTTERGRV--LDFPAIY 120

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-------AHNMKYHPIV 175
           Y+    F +HK    S+ + L+G +I V+AGTT+E  +    K       A +    P  
Sbjct: 121 YYTPYVFAVHKDAAGSNTADLNGKTIGVEAGTTSEDYINRRLKIDAADVPAFSYSVEPGE 180

Query: 176 FERVEEIDAAYRA------HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            +   +              R DA    +  +         P    +        PLA A
Sbjct: 181 VQTYGDSMGPLDDLRMGNGTRLDATLSALPTVMGAI-KAGYPIT-PVQGKPAYYEPLAIA 238

Query: 230 IIQGDTEWYNIVSWTHYAM 248
             +GD  +   ++     M
Sbjct: 239 TDKGDDAFNAELAKAVEGM 257


>gi|117919334|ref|YP_868526.1| extracellular solute-binding protein [Shewanella sp. ANA-3]
 gi|117611666|gb|ABK47120.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           ANA-3]
          Length = 244

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 17/228 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD++  + ++         ++   +     
Sbjct: 23  KSNDILVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKRIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
            +AL S +ID ++     T  R+    + F    Y   Q  +++K    I ++  +    
Sbjct: 80  IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNDTIHTLDDIKDKH 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ G+T +        +     +   F    E     +  + D    D          
Sbjct: 138 FAVQLGSTAD------MMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           N    +  ++           A+ +   E  N ++ T   +  + +  
Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQ 236


>gi|330944616|gb|EGH46566.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 147

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 2/121 (1%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   + S ++S L  IK R  L  G+ +    F  V   G + GFD D  +  +  +  D
Sbjct: 29  VAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 88

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             KI+++ +    R   LQS ++D++  N   T  R     + F           ++ + 
Sbjct: 89  EKKIEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTNPNLRVAVQALVPQA 146

Query: 135 K 135
            
Sbjct: 147 S 147


>gi|257868053|ref|ZP_05647706.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257874383|ref|ZP_05654036.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257802136|gb|EEV31039.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257808547|gb|EEV37369.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 493

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 22/263 (8%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEV-- 50
           M +       + I+  ++ FF     +A     I   +K+ G L  G++     +     
Sbjct: 1   MKRFSKGTVLLGIITALLPFFFVGQAHAEETDPIYEKVKENGVLVVGLSADYAPYEFRAN 60

Query: 51  -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                +  G D+   + ++  +  D   ++   L       AL++ +ID++      T  
Sbjct: 61  VDGKNEIVGIDISIAQKIADDLGVD---LKIEELGFDALLGALKTGKIDVVISGMAATDE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R     + F        Q  ++  +      S +   G ++  Q  TT E          
Sbjct: 118 RRK--EVNFTDTYMEVQQTVLVRAEDADRFQSTADFDGVAVGAQRQTTQEELANTEL--- 172

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    +RV ++    ++ + DA   +     A    ND  +    +         A
Sbjct: 173 -TGSTVTSLQRVPDLITNLKSRKIDAIVMEGPVAEAYVTANDTLALAENVTFENGVKETA 231

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
            AI +        ++ +   +++
Sbjct: 232 IAISKEAPVLLEKLNSSIETIIS 254


>gi|325063358|gb|ADY67048.1| amino acid ABC transporter, periplasmic protein [Agrobacterium sp.
           H13-3]
          Length = 280

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 76/259 (29%), Gaps = 19/259 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +++     + F + +  A +L  IK               F  V  +G   G+  D  + 
Sbjct: 10  LTLCAAFAVSFGASAHAADLLEKIKADKVFTVATEARFAPFEFV-EDGKIVGYSADIMQE 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +  A+     K     L  +     L + + D +  +   T  R  +  L          
Sbjct: 69  VMKALPGVELKRL--DLPWQGILPGLAASRFDYVVTSVTVTPERMKAYKL--SAPVADAT 124

Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEE 181
              +  K    IS    ++G  +  QAG+     L    A+   A         +    E
Sbjct: 125 MAILKRKGDAEISKPEDIAGKPVGSQAGSAQLKALETFSAELKAAGKDATTVSSYTDFSE 184

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNI 240
             A   A R  A     S    L+    RP     +LP    K+  + A           
Sbjct: 185 AYADLGAGRLRAVV--NSLPNLLEAARQRPDAFEVVLPTFGPKTYFSWAGRNDTDS---- 238

Query: 241 VSWTHYAMVTAEELGITQK 259
              T  A + +E   +   
Sbjct: 239 --ATLNAFMDSELAKLNAS 255


>gi|227524184|ref|ZP_03954233.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Lactobacillus hilgardii
           ATCC 8290]
 gi|227088654|gb|EEI23966.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Lactobacillus hilgardii
           ATCC 8290]
          Length = 476

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 19/234 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +     +  L  L F++ +  A              G +     F        + G D+D
Sbjct: 12  RWVVFLMTFLTCLIFSNIAAQAKTYQ---------IGTDVTYPPFEFANKQNKYVGIDID 62

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++     +  K+   P+       ++QS Q D +      T  R+      F    
Sbjct: 63  IMNAIAKE---EGFKVHIKPVGFNAAVQSVQSGQEDGVIAGMTITPDRQA--KFDFGTPY 117

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y  G    + K   I++  QL G  + ++ GT          K +  K   + F+  + +
Sbjct: 118 YKTGVVMAVAKSSHITNFKQLKGKRVALKTGTAAADYANSIKKKYGFKT--VTFDDSDNM 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                     A   D   +   +    +  +  I+    +      A+ +G  +
Sbjct: 176 YQDVTTGNSVACFEDQPVM---QYGIKQGLKLKIVTKPANTGWYGFAVKKGTHK 226



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 10/203 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +     F        + G D+D  RA+++       K++  PL       A++
Sbjct: 264 KTFTIGTDVTFPPFEFANKQNKYVGIDMDLVRAIANE---QGFKVKIKPLGFNAAVQAVE 320

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S QID +      T  R+      F    +  G    ++KK  + S+SQL G  + V+ G
Sbjct: 321 SGQIDGVIAGMSITNARKA--QFNFSNPYFTSGVVMAVNKKSKVKSLSQLRGKKVAVKTG 378

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T          K +        F+    +          A   D   +   +    + ++
Sbjct: 379 TAGADYANSIKKKYGF--TVTTFDDSNNMYQDVTTGNSAACFEDHPVM---QYAIKQGTK 433

Query: 214 HVILPDIISKSPLAPAIIQGDTE 236
             I+      +P   A+ +G  +
Sbjct: 434 LKIVTKPAESAPYGFAVKKGHNK 456


>gi|153010087|ref|YP_001371301.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561975|gb|ABS15472.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 248

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 76/239 (31%), Gaps = 24/239 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKA-NGDWKG 58
           M K      L L     +S + +A+ L      G  LK G +T       V    G   G
Sbjct: 1   MKKTILTLALAL----MSSVAAHAADLE-----GKMLKVGSDTTSPPMESVDPATGQIVG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD   A+ + I        ++       F AL+    D+++     T  R+    + F
Sbjct: 52  FDVDVVNAICAKINCKAE---FVTTGWDGIFAALEQGNFDLVASGVSITDERKK--AMDF 106

Query: 119 RPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                 + Q  +M  +    ++      G  +  QA TT            N     + +
Sbjct: 107 SEPYIVNSQAVLMRAEDDGLTLDDFKSKGKKLSAQANTTDAQVAEGIVGKDN----VVAY 162

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +       A +    D    + +   A +       E V+    +   PL     +GD 
Sbjct: 163 DSFSASVIALKNKDVDGVVINGANAPAYEKEFA--GELVVPIRDLQSDPLGLVFRKGDE 219


>gi|323699626|ref|ZP_08111538.1| Arogenate dehydratase [Desulfovibrio sp. ND132]
 gi|323459558|gb|EGB15423.1| Arogenate dehydratase [Desulfovibrio desulfuricans ND132]
          Length = 258

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 96/270 (35%), Gaps = 16/270 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F ++L   +L  T  ++ A    DI   G L+ G       F+    NG ++GFD
Sbjct: 1   MTKT-FGALLVCFMLLCTVSNSQARSFDDIVASGTLRVGTTGDYKPFSF-DNNGTYEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   ++ +  +     K++ +    K     L++ + DI       T+ R+      F  
Sbjct: 59  IAVAQSFADRLG---LKLELVKTTWKTLMADLKADKYDIGMSGITRTIARQKEAR--FSQ 113

Query: 121 ITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                G+  ++++         +   + G  I V  G T E  +    KA+      ++F
Sbjct: 114 GYVMFGKTILVNRDNVARFKSLADVDVKGVRIGVNPGGTNEKFV----KANIRNAEVVMF 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E    I  A    + D    D         T+   S   +     +++ L   +      
Sbjct: 170 ESNLAIPPAVAVKKVDVMITDSVEALYYAATDANLSA-PLADAPFTRAELGYLMPASAER 228

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266
             + V +    M+   E+   ++    +++
Sbjct: 229 LQDTVDFMMDQMILKGEMADLRQQYLHMTE 258


>gi|23098459|ref|NP_691925.1| glutamine ABC transporter glutamine-binding protein [Oceanobacillus
           iheyensis HTE831]
 gi|22776685|dbj|BAC12960.1| glutamine ABC transporter glutamine-binding protein [Oceanobacillus
           iheyensis HTE831]
          Length = 272

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 86/260 (33%), Gaps = 24/260 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--------------LKCGINTGLVG 46
           M K+ +  ++ L  L     +  +         G                    +   V 
Sbjct: 1   MKKNKWSLLIVLSALLIFLAACGSGEEDLASGEGEDESNNESSYDLEESYTVVSDNSFVP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  V  +G+  GFD++  +A++     +    +    N       LQ++Q DI       
Sbjct: 61  FEFV-EDGELTGFDIELIKAIADEAGFEIEGGEIQTTNFDGIIPGLQTQQFDIAIAGISI 119

Query: 107 TLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           T   +    + +    Y  G    +    + I+S+  L G ++  + G+T+    AD+ +
Sbjct: 120 TE--DRKQVIDYSEPYYESGLKIGVSADNEDINSIEDLEGKTVATRMGSTS----ADFLE 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
            +        FE+++++  A      DA   D   +     T         + ++     
Sbjct: 174 ENTEDATINQFEQLDQVYLAVENGSADAVVYDAPNVDYYISTTGDG--LKTVGELYQAEN 231

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
              AI +G+ +    V    
Sbjct: 232 YGIAIAKGNEDLVAAVDDAL 251


>gi|16264849|ref|NP_437641.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Sinorhizobium meliloti
           1021]
 gi|307319924|ref|ZP_07599347.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|15140988|emb|CAC49501.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Sinorhizobium meliloti
           1021]
 gi|306894464|gb|EFN25227.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
          Length = 248

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 71/237 (29%), Gaps = 22/237 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      + ++     S +     L        LK G +T       V    G   GF
Sbjct: 1   MKKLMIALAVAVLASGGASAADLGGKL--------LKVGSDTTSPPMESVDPATGQIVGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+ + I        ++       F AL     D+++     T  R+    + F 
Sbjct: 53  DIDVVNAICAKINCQAE---FVTTGWDGIFAALDQGNFDLVASGVSITEERKK--AMDFS 107

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                + Q  +M  +    S+      G  +  QA TT            N     + ++
Sbjct: 108 DPYIVNSQAVLMRVEDQGVSLEDFKSKGKKLSAQANTTDAQVAEGVVGKEN----VVAYD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                  A +    D    + +   A +       E V+    +   PL     +GD
Sbjct: 164 SFSAAIIALKNKDVDGVVINGANAAAYEREFV--GELVVAIRDLESDPLGLVFRKGD 218


>gi|162148490|ref|YP_001602951.1| putative arginine-binding periplasmic protein 2 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787067|emb|CAP56654.1| putative arginine-binding periplasmic protein 2 precursor
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 305

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 89/281 (31%), Gaps = 34/281 (12%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                +  ++         A  L DI+  G L  G+N  L   A   +    +GFDVD  
Sbjct: 43  ILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVG 102

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL++ +   P   + +P+++  R   L + ++D++      T  R     +AF    Y 
Sbjct: 103 TALAARLGVSP---RLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAA--AIAFSAPLYA 157

Query: 125 DGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +    I      +  +  L+     +    G+T    L  +          ++     + 
Sbjct: 158 EEFAIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKA----PILLLGSYPDA 213

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWY 238
             A    R DA        Y  +     P     +      +P A      + Q DT+  
Sbjct: 214 VRALAQGRGDAMVD--VIEYVGRFLAAEPQAGWTIQ--RGFAPAAGEDCVGVAQSDTDLL 269

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
            +V  T                 +     T     +R+ G+
Sbjct: 270 RVVDGTL---------------ADLKRDGTIQAAYRRWFGV 295


>gi|126731796|ref|ZP_01747600.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Sagittula stellata E-37]
 gi|126707623|gb|EBA06685.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Sagittula stellata E-37]
          Length = 274

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 82/251 (32%), Gaps = 16/251 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           ++   +++    +  T+ +  A  L D      L  G       F   +++G   GF++D
Sbjct: 16  RNLRSTLIGAAFVVATAGAVMAQDLPD-----SLTIGTEGAYPPFTYTESDGSLAGFEID 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+ + +        ++  +       LQ+++ D +  +   T  R   +G  F    
Sbjct: 71  LGNAMCAHL---EMTCDWVAQDWDGLIPGLQAQKYDAIIASLYITDERRKVIG--FSEAY 125

Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y     F +        S   LSG  +  Q  T+ E  +              ++  ++E
Sbjct: 126 YKVPARFAVPVDSDFEISAEGLSGKIVGTQRATSFERFMNATMP----DVEVRLYGTMDE 181

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNI 240
                 + R D    D+ A+ +  L++     + +  P+                +    
Sbjct: 182 AYLDLVSGRVDTVMADVVAMQSSFLSSPEGEAYEMRGPEFTDPQFFGYGAGVAVRQDDQY 241

Query: 241 VSWTHYAMVTA 251
           ++      + A
Sbjct: 242 IADAFSEAIKA 252


>gi|311898732|dbj|BAJ31140.1| putative glutamate ABC transporter substrate-binding protein
           [Kitasatospora setae KM-6054]
          Length = 303

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 12/232 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75
             +    +      K RG L  G  +            G   GFD++  + +++ +    
Sbjct: 49  AAAKLDASKTWTTAKTRGKLVVGAKSDQPFLGFEDVQTGKRNGFDIEIAKMVAADLGFSA 108

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            +I++  +N+  R  +L   QID        T  R+    + F    Y  GQ  +++K  
Sbjct: 109 DQIEFKTINSSARETSLSGDQIDYYVGTYSITPKRKE--QIDFAGPYYIAGQSLLVNKDN 166

Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+        ++C  AG+T+   +               FE              DA 
Sbjct: 167 TAITGPETTKDKAVCTAAGSTSVAGIQ------KYGAKVTTFESYSLCVEKLLTKEVDAV 220

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           T D S L           +  ++    S+      + +GD      ++    
Sbjct: 221 TTDDSILKGYAA--KNQGQLKVVGTPFSEERYGVGLKKGDAALQKAINDALK 270


>gi|226939780|ref|YP_002794853.1| Glutamine transport system substrate-binding protein precursor
           [Laribacter hongkongensis HLHK9]
 gi|226714706|gb|ACO73844.1| Glutamine transport system substrate-binding protein precursor
           [Laribacter hongkongensis HLHK9]
          Length = 263

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 7/211 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
                K G+N     F  V ++G  +GFD++  +A++ A      K++ +    +  F  
Sbjct: 37  AEKTYKVGVNAAFAPFESVDSSGKMQGFDIELAQAVADAAG---IKVEMVNTPWEGIFAG 93

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L +   D+L      T  R+    + F    +   Q  ++ K K + S   L    + V 
Sbjct: 94  LDNGDQDLLVSAITITGERKA--SMDFTEPYFEATQLVVLPKGKTLDSTDALRNMKVSVL 151

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+T +        A     +   FE +            +A  GD   +      N   
Sbjct: 152 TGSTGDTVAQKLMGA--TSTNIKRFETLPLALKELENGGVEACIGDNGVVANYVANNSGT 209

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              VI      K     A+ +G+ E    ++
Sbjct: 210 EFTVIDNLEFDKEYYGMAVRKGNAELLEKLN 240


>gi|254253099|ref|ZP_04946417.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124895708|gb|EAY69588.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 259

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D+++   + T  R+    + F P  Y      I  +   +    + L G  + V  G
Sbjct: 83  RKFDVINSAMNITAKRK--QSIDFTPAIYVVPIVMIARRGSPLRPDAASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            + E  L  ++    +    + ++  ++I A   A R DA   +        L      +
Sbjct: 141 ASQEDFLKAHWANAGVS--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + +GD      V     A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKGDGALRAKVVGALDAL 238


>gi|194468077|ref|ZP_03074063.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
 gi|194452930|gb|EDX41828.1| extracellular solute-binding protein family 3 [Lactobacillus
           reuteri 100-23]
          Length = 263

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 18/215 (8%)

Query: 1   MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K   ++I+ L +          + ++++  ++  +G L  G+      ++    N 
Sbjct: 1   MKFWKKALLTIVALTVGTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  +A++  +        ++P         L S + D++  N   T  R    
Sbjct: 60  KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           I+     I S+  + G  I    GT     +         K +  
Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVVK------KYKGNLT 168

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                       +  R         A YA    N 
Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203


>gi|86360162|ref|YP_472051.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86284264|gb|ABC93324.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 268

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 82/266 (30%), Gaps = 19/266 (7%)

Query: 1   MYKDFFVSIL---CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +    ++L    ++          + +    ++R  ++  +      F  + AN   +
Sbjct: 1   MLRISIQTLLRGALMLGAVGVVLGVASPLPVAAQERMPMRVAVEGAFPPFNYLDANNKLQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   AL         + Q++     +    L + + D +  +   +L R     +A
Sbjct: 61  GFDIDIANALCE---TGKFECQFIIEKWDDMIPDLVAGKYDAIISSMSMSLER--RQKVA 115

Query: 118 FRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y     FI  K   I+  S + LSG  + V + T  E     ++          V
Sbjct: 116 FTEKYYNSPSVFIARKDSPITDVSPAALSGKKLGVTSSTAQESYANHFYP----DMKKTV 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAI 230
           F    E+       R D    D  A+Y         +         +           A+
Sbjct: 172 FRSSPELYKGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFGEGAGIAV 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGI 256
              D +    ++     +       +
Sbjct: 232 RLDDKDRLARLNEALKTIKEDGTYDM 257


>gi|257438674|ref|ZP_05614429.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Faecalibacterium prausnitzii A2-165]
 gi|257198903|gb|EEU97187.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Faecalibacterium prausnitzii A2-165]
          Length = 282

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 88/269 (32%), Gaps = 36/269 (13%)

Query: 1   MYKDFFVSI----LCLIILFFTSFS-----------------TNASILGDIKKRGFLKCG 39
           M +  F+S+        +L  +  S                 ++A  L  I+  G L   
Sbjct: 1   MKRRTFISMMSVMAAAGVLTLSGCSNSSTSTAASSGASSAAGSSADQLAAIQASGKLIVA 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           +      ++    +    G+DV+  RA++  +  +P    Y+  +    F  L + + D+
Sbjct: 61  LEGAWQPWSYHDESDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRFDM 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTEL 158
           +    + T  R  +L   F     +      + K    I +   L G +      +T   
Sbjct: 118 VCNGVEVTDER--ALTYDFTTPYGYIHTALAVRKDNDEIKTFEDLKGKTTANSLASTYME 175

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            LA+ + A          + +EE      A R DA      + Y     +    +  I+ 
Sbjct: 176 -LAESYGA-----TVQGIDTLEETIQLLAAGRIDATLNADVSFYDYLNVHPDA-DFKIVA 228

Query: 219 DIISKSPLAPAIIQGDTE--WYNIVSWTH 245
                S +A  + +GD        V+   
Sbjct: 229 QTEDASHVAIPLRKGDNSATLLEAVNNAI 257


>gi|153009784|ref|YP_001370999.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561672|gb|ABS15170.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 265

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 75/245 (30%), Gaps = 22/245 (8%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           SI+ + +      +     L        L  G            A+G   GF+V+  +AL
Sbjct: 12  SIIAMALSLGAGIAHGEEPL-------KLIIGTEGANPPMNYQLADGTLAGFEVEIAKAL 64

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              +    ++ + +  +      A+QS + D    +   T  R+    + F    +    
Sbjct: 65  CDQM---KAQCEIVAQDWDGAIPAIQSGKFDAFIASMSITEERKK--QVDFSNKYFNPPP 119

Query: 128 GFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G +  K   I   +   L+G ++ VQ  TT       YF           +   +E    
Sbjct: 120 GMVALKDSDIKGVTKDDLAGKTVGVQGSTTHANYAEAYF----TDSTVKAYPTSQEFKLD 175

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIV 241
               R DA   D  +L     T +     +I                AI +G  E  +  
Sbjct: 176 LVNGRLDAINDDSVSLAEWLKTPEGACCKMIGTYPPVAQYHGAGVGAAIKKGRPELVSKF 235

Query: 242 SWTHY 246
           +    
Sbjct: 236 NEAIK 240


>gi|15595511|ref|NP_249005.1| L-cysteine transporter of ABC system FliY [Pseudomonas aeruginosa
           PAO1]
 gi|254237452|ref|ZP_04930775.1| hypothetical protein PACG_03527 [Pseudomonas aeruginosa C3719]
 gi|254243412|ref|ZP_04936734.1| hypothetical protein PA2G_04226 [Pseudomonas aeruginosa 2192]
 gi|9946160|gb|AAG03703.1|AE004469_8 L-cysteine transporter of ABC system FliY [Pseudomonas aeruginosa
           PAO1]
 gi|126169383|gb|EAZ54894.1| hypothetical protein PACG_03527 [Pseudomonas aeruginosa C3719]
 gi|126196790|gb|EAZ60853.1| hypothetical protein PA2G_04226 [Pseudomonas aeruginosa 2192]
          Length = 256

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 68/239 (28%), Gaps = 19/239 (7%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+++   +   +A +L D+ +RG L+  +      F   +  G   GF+ +    L++ 
Sbjct: 7   LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +   P    ++          LQS + DI          R       F           I
Sbjct: 66  LAVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 120

Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +   +     S+  L G  + V  GT                 +   +    E      +
Sbjct: 121 VRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175

Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R DA   D         +          + P      P      + + ++   ++   
Sbjct: 176 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 230


>gi|261339786|ref|ZP_05967644.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Enterobacter cancerogenus ATCC 35316]
 gi|288318620|gb|EFC57558.1| lysine/arginine/ornithine ABC transporter, periplasmic
           lysine/arginine/ornithine-binding protein ArgT
           [Enterobacter cancerogenus ATCC 35316]
          Length = 257

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 83/251 (33%), Gaps = 25/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  L + +    SFS+ A+          L+ G+      F    A+G+ +GFD
Sbjct: 1   MK----LRALVVGMGLLCSFSSFAAT--------ELRYGLEAEYPPFESRNASGELEGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+  A      K  ++  +       L SK+ D ++   + T  RE    + F  
Sbjct: 49  VELGNAICKAA---ALKCSWVETSFDALIPGLVSKKFDAINSAMNITAQREK--SIDFTQ 103

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +      I  +   L G +I V  G+  E    ++++        + ++  
Sbjct: 104 PIYRIPSQLVGKAGSAIDATPEGLKGKTIGVLQGSIQETYAKEHWEKQG--VTVVSYKDQ 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
                     R DA     +A  A  L+  +      +   +S        +   + +GD
Sbjct: 162 NMAWGDLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGD 221

Query: 235 TEWYNIVSWTH 245
                 +    
Sbjct: 222 EATKKQLDAAI 232


>gi|325125966|gb|ADY85296.1| Glutamine ABC transporter permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 493

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 24/257 (9%)

Query: 6   FVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAE---VKA 52
             ++L L  LF  +             + +++  IKK G L  G++           V  
Sbjct: 1   MTALLLLAGLFTAAIPAVDAASSRKVASGTVMKKIKKSGKLVVGLSADYPPLEFTKNVNG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
              + G DV+  + ++  +      ++   +      +AL++ +ID++      T  R+ 
Sbjct: 61  KNKYVGVDVELAKQIAKDLGVK---LEIKNMGFDSLLVALETGKIDVIISGMTPTAERKK 117

Query: 113 SLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
              + F  I Y    D        K   +S +   G ++  Q G+    +L        +
Sbjct: 118 --SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKKNAAKSGI 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K   +       +  A ++ + DA             TND     V      ++   A  
Sbjct: 176 KVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYTTNDTSLSLVKSSLSQAQMGNAVG 232

Query: 230 IIQGDTEWYNIVSWTHY 246
           + +G  +    ++ T  
Sbjct: 233 VAKGQGDLVKAINKTIN 249


>gi|296119655|ref|ZP_06838213.1| serine/threonine-protein kinase PknD [Corynebacterium ammoniagenes
           DSM 20306]
 gi|295967538|gb|EFG80805.1| serine/threonine-protein kinase PknD [Corynebacterium ammoniagenes
           DSM 20306]
          Length = 288

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 82/272 (30%), Gaps = 25/272 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF---STNASILGDIK-------------KRGFLKCGINTGL 44
           M      ++  + +L                +I              + G L  G N   
Sbjct: 1   MKYKVLAALASVTVLSGCVTNSEPALPDGWEEITPERVDAIAAMVDDEDGVLTAGTNPPF 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F      G+  G ++D  RA++S +  D   ++    +      ++Q  Q+DI     
Sbjct: 61  APFEFKDDAGNIVGVEMDLARAMASVMGLDFQPVE---QDFAMILPSIQGGQLDIGVSGF 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-TLADY 163
             T  R       F    Y   Q                 G ++ VQ  T +E   +   
Sbjct: 118 TDTEER--RQNFDFVNYLYAGIQWAQPTSTSKDVDPENACGLTVAVQRTTVSETDDVRPK 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
               +     + ++  +    A    R DA + D          N    +  ++ ++   
Sbjct: 176 AAECDGDLEILSYDTSDNAAIAALTGRADALSADSPVTA--YAVNRSDGQLEMVGEMFDA 233

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +P   A+ + D+++   ++     ++   +  
Sbjct: 234 APYGMAVAK-DSDYGPAMAAALQHLIDTGDYA 264


>gi|222153290|ref|YP_002562467.1| glutamine ABC transporter glutamine-binding protein/permease
           [Streptococcus uberis 0140J]
 gi|222114103|emb|CAR42546.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus uberis 0140J]
          Length = 724

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 68/210 (32%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   VS+L ++   F   S        I     +    +T    F    ++  +KG D
Sbjct: 1   MKKILKVSLLAMLAPLFFMGS--------IVSAETITIVSDTAYAPFEYKDSDQVYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D    +           A+QS Q + L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRQNWD---FKMTFPGFDAAVNAVQSGQANALMAGTTITEDRQKV--FHFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K K I S   L G S+ V+ GT  +  L  + + +        F+  +
Sbjct: 108 PYYDTKIVIATQKAKPIKSYKALKGKSVGVKNGTAAQSFLDKHKEKYGYS--VKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  +   DA   D   +      N  
Sbjct: 166 LMYNSLSSGSIDAVMDDEPVIQFAIKQNQD 195



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 70/241 (29%), Gaps = 13/241 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              S    +     +K++  +    ++    F      G++ G D++  +A++       
Sbjct: 254 SLASTGDASKKATPVKEKYKIVA--DSSFAPFEFQNDKGEYVGIDMELIKAIAKQ---QG 308

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+           A+QS Q D        T  R+      F    Y       +    
Sbjct: 309 FTIEIANPGFDAALNAVQSGQADAAIAGMSITDQRKEI--FDFSDSYYTSKILLGVKSGS 366

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            ISS   L G ++  + GT +   L          Y    F+    +  +  +    A  
Sbjct: 367 KISSYKDLKGKTVGAKKGTASYDFL--DNNKDKYNYSLKAFDEASSMYDSLNSGSIVALM 424

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D      LK    +  +               A+ +  + E   + +    A+  + E 
Sbjct: 425 DDE---AILKYAIQQGRQFETPIKGEPSGEYGFAVKKGSNPELIEMFNNGLAALKKSGEY 481

Query: 255 G 255
            
Sbjct: 482 K 482


>gi|104781005|ref|YP_607503.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas entomophila L48]
 gi|95109992|emb|CAK14697.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Pseudomonas entomophila L48]
          Length = 260

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 85/256 (33%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +  L           A+ +   K+   ++ G+      F  V A+G  +GFD
Sbjct: 4   MRKRLGVLLFSLC----------ATTVSQAKEWTEIRFGVYPEYPPFESVAADGSLQGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+ + +     K  ++         AL++++ D +  +   T  R     + F  
Sbjct: 54  IELGNAICTKL---QVKCTWVHNEFDGMIPALRARKFDAIMSSMAVTPAR--LKQIDFTN 108

Query: 121 ITY-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +       +    +   SV  L G  + V  G+  E                  ++  
Sbjct: 109 KLFLSPTSVIVRRSAEFGDSVESLKGKQVGVLQGSLQEAYARAVLAPLG--AQVKAYQAQ 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTE 236
           ++  A     R DA   D        L+    ++    P   D      +A  + + D E
Sbjct: 167 DQNYADLMNGRLDATVTDKLEAQLNFLSKPEGADFKSGPAIKDPTLPLDIAMGLRKTDPE 226

Query: 237 WYNIVSWTHYAMVTAE 252
              ++     A++ A+
Sbjct: 227 LKALLDKGI-ALIHAD 241


>gi|157164859|ref|YP_001466155.1| solute-binding family 1 protein [Campylobacter concisus 13826]
 gi|112800372|gb|EAT97716.1| L-cystine-binding protein TcyA [Campylobacter concisus 13826]
          Length = 250

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 78/242 (32%), Gaps = 17/242 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F  I   I   F + + NAS +    K+G L          ++     G+  G+DVD  +
Sbjct: 3   FKPIFGFIAGAFLALNLNASTI----KKGELIVATEGTYSPYSFYDEKGELVGYDVDIAK 58

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++  +     KI++L         A  + + D++         R+              
Sbjct: 59  AVAKKL---NLKIEFLTAPWDAMLAAFDAGKADVVFNQVSINEDRKK--KYDMSVPYTMP 113

Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               ++HK    I S + L G    V + T+    +A+   A       +V +   +   
Sbjct: 114 YPVIVVHKDNNDIKSFADLKGKKS-VHSATSNWAAIAEKNGA-----TVVVADGFSKGVE 167

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              + R D    D    +             I        P A  + +G+TE    ++  
Sbjct: 168 LIISKRADDTINDNVTFFDYIKQRPNAP-LKIAYTSNEPMPTAALLKKGNTELLEAINKA 226

Query: 245 HY 246
             
Sbjct: 227 LN 228


>gi|29375478|ref|NP_814632.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227555005|ref|ZP_03985052.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|255973964|ref|ZP_05424550.1| amino acid ABC transporter [Enterococcus faecalis T2]
 gi|257086232|ref|ZP_05580593.1| amino acid ABC transporter [Enterococcus faecalis D6]
 gi|257418488|ref|ZP_05595482.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|307278411|ref|ZP_07559486.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307286701|ref|ZP_07566787.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|29342938|gb|AAO80702.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227175864|gb|EEI56836.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|255966836|gb|EET97458.1| amino acid ABC transporter [Enterococcus faecalis T2]
 gi|256994262|gb|EEU81564.1| amino acid ABC transporter [Enterococcus faecalis D6]
 gi|257160316|gb|EEU90276.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|306502179|gb|EFM71463.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504917|gb|EFM74112.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|315027079|gb|EFT39011.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315165246|gb|EFU09263.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315167972|gb|EFU11989.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315574194|gb|EFU86385.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581663|gb|EFU93854.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 487

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 75/234 (32%), Gaps = 15/234 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74
           T  +    +   I ++G L  G++     +     V       GFD+   + ++  +   
Sbjct: 27  TFAAETDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++   L       AL++ +ID++      T  R   +   F        Q  I+ K+
Sbjct: 87  ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                 S     G     Q  TT E  +            P   +++ ++    + ++ D
Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A   +     A    N+  +   +  +  SK   A A  +        V+ +  
Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFADVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250


>gi|257460120|ref|ZP_05625224.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268]
 gi|257442561|gb|EEV17700.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268]
          Length = 247

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 73/252 (28%), Gaps = 25/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F ++L   ++  T    +A  L +    G L          ++      +  GFD
Sbjct: 1   MK--IFKALLATALITATL---SAKTLKE----GTLVIATEGTYSPYSFYDEKNNLTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL+  +        +L         A  + + DI       T  R+      F  
Sbjct: 52  VDIARALAKELGLKAE---FLTAPWDAMLAAFDAGKADIAMNQVSITQERKK--KYNFSE 106

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    ++      I S + L G      +  +     AD  +++      +  +  
Sbjct: 107 PYTVAYAALVVRADNEEIKSFADLKGKK----SVHSATSNWADMARSYG--AEIVTADGF 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWY 238
            +      A R DA   D    +            +         P  +  +++ D E  
Sbjct: 161 SKGVELIIARRADATINDNITFFDYMKQRPNAPLKIA---AQGNEPIYSAVLLKKDDELT 217

Query: 239 NIVSWTHYAMVT 250
             ++    ++  
Sbjct: 218 AQINSALKSLKQ 229


>gi|258545836|ref|ZP_05706070.1| histidine ABC superfamily ATP binding cassette transporter,
           histidine-binding protein HisJ [Cardiobacterium hominis
           ATCC 15826]
 gi|258518852|gb|EEV87711.1| histidine ABC superfamily ATP binding cassette transporter,
           histidine-binding protein HisJ [Cardiobacterium hominis
           ATCC 15826]
          Length = 256

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 90/263 (34%), Gaps = 24/263 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++I         + + +            L    +     F+E+ ++G   GFD
Sbjct: 1   MKK--LLAIALCAGFAGNALAADKP----------LIFSTDGTYPPFSEMGSDGQMTGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +  +    ++ P++ +    ALQ+K+ID++  + + T  R     +AF  
Sbjct: 49  IDIGKALCEQMKRE---CRFEPIDWEGLIPALQTKKIDVILASMNDTPER--RESIAFTD 103

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y +   F+  +   I  +   + G  + V   +  +  +   F   N       +   
Sbjct: 104 PYYSNPGLFVRAEGSKIEPTPEGVKGKVVGVLRASIFDNYVTAKFPDAN----IQRYTSQ 159

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE +    A R D    D   +    L  D      I  +          I  G  +  N
Sbjct: 160 EEANQDALAGRVDLLFADKIVMEDGFLQRDEGKGFEIAGETNDPEYFGAGISIGVRKDDN 219

Query: 240 IVSWTHYAMVTA--EELGITQKN 260
            +     A + A  E     + N
Sbjct: 220 ALREELNAALKAIKENGAYKKVN 242


>gi|257125597|ref|YP_003163711.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
 gi|257049536|gb|ACV38720.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
          Length = 252

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 29/262 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  + +  +     S   S     K    L  G N     F  +  NG+  GFD
Sbjct: 1   MKKLLLIITMAIFGIV----SWGESKTETKKDEKKLIVGTNGVFPPFEYM-ENGELVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + +   +  +   I+           +L++ ++D +      T  R+    + F  
Sbjct: 56  IDLIKQIGKNLGYE---IEMKSQPFDALIPSLKAGKLDAIISGITVTEARKRL--VDFTD 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q ++  K    ++S   LSG  + VQ GT  E      F+A+ +K   ++    
Sbjct: 111 EYFNSTQVYLRKKGNIAVNSKESLSGKKVGVQLGTIQE------FEANKIKNVNVITNDA 164

Query: 180 E-EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I    +  + DA   +   + A++     P   +   +   K P   AI     +  
Sbjct: 165 TVNIILDLKNGKTDAVILEN--IVAMEFMKKNPDIEIFYEE---KLPYGMAIAFDKGKHS 219

Query: 239 NIVSWTHYAMVTAEELGITQKN 260
            ++   +      EEL   Q+N
Sbjct: 220 ELIKKIN------EELKKLQEN 235


>gi|254509081|ref|ZP_05121184.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus 16]
 gi|219548014|gb|EED25036.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus 16]
          Length = 258

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 79/245 (32%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F   + L +L  T  +   S L +I + G L+ G                 ++GF
Sbjct: 1   MRKLIF--AVGLWLLALTQLAYADSRLHEILENGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +  +   ++++  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVE---VEFVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  +        +    GT  E  + D+F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFDKPDVKVAATLGTVQEKMVKDFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N ++
Sbjct: 230 INYIN 234


>gi|116254360|ref|YP_770198.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259008|emb|CAK10117.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 257

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 68/231 (29%), Gaps = 14/231 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK  G  K G       F     +G   GFDV+   A+++ +        ++ 
Sbjct: 23  AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141
                    L +K+ D +      T  R+      F           I       I S +
Sbjct: 80  GKWDGLIAGLDAKRYDTVINQVGITETRK--QKYDFSEPYIASKAVLIARDGDDSIKSFA 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G     Q+ T+    LA    A       +  +  ++        R DA   D  + 
Sbjct: 138 DLKGKK-AAQSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              K          I+ +  +       I + + E    ++    A + A+
Sbjct: 192 LDFKKHKPDAPV-KIVAEQENADYSGIIIRKNEPELLAEINKAL-ADIKAD 240


>gi|238784073|ref|ZP_04628088.1| Glutamine-binding periplasmic protein [Yersinia bercovieri ATCC
           43970]
 gi|238715050|gb|EEQ07047.1| Glutamine-binding periplasmic protein [Yersinia bercovieri ATCC
           43970]
          Length = 247

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 13/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   + +  + GFD+D   A++  +          P++      A
Sbjct: 23  AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKLDVKY---TLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150
           LQ+K +D+       T  R+    + F    Y  G   ++      I   + L G  + V
Sbjct: 79  LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNDIKGEADLQGKVVAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +     DY KA+        F  ++         R DA   D   +     T   
Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +   + D I       A  QG ++  + V+    ++  
Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLRDKVNVALKSLKE 230


>gi|239630683|ref|ZP_04673714.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526966|gb|EEQ65967.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 485

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 1   MY-----KDFFVSILCLIILFFTSFS-------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M      K + ++ + L+ +     +         +  L  I+KRG+L  G++       
Sbjct: 1   MKHMRGIKHWAMAFIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLE 60

Query: 49  E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
               +       G D+   + ++  +      +Q   +N      AL++ +ID++     
Sbjct: 61  FHATLNGADTIVGADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADY 163
            T  RE    + F     ++ Q  ++ K       S++  SG  +  Q  TT E      
Sbjct: 118 KTPEREK--EVNFSTPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQ 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                        ++  ++ A    ++ D      +   +                   K
Sbjct: 176 LP----GAKISSLDKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPK 230

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DV 273
           +P A A+ + ++     V+ T   +  A+     Q       ++ +             +
Sbjct: 231 APTAIAVSKQNSALLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGAL 290

Query: 274 QRFLGIDKSSNIGEALG-------LTKDWTYRIIRHM 303
              +    +   G  +G       L+  W  + I ++
Sbjct: 291 YTLIFAVLTVFFGTVIGTLLALMKLSHSWFAKAIANV 327


>gi|251795091|ref|YP_003009822.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
 gi|247542717|gb|ACS99735.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
          Length = 286

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 92/277 (33%), Gaps = 39/277 (14%)

Query: 2   YKDFFVSILCLIILFFTSF---------------STNAS--------ILGDIKKRGFLKC 38
            K     +  ++++   +                + +A          L DIKK G +  
Sbjct: 4   KKSLVFILTLVVVVTLAACGGKNNANNSSSNETPAASADNGAAEATGKLADIKKAGKIVL 63

Query: 39  GINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           G +     +     V       GFD++  + ++  +  D   ++   ++       L+  
Sbjct: 64  GTSAEYAPYEFHKNVDGKDQIVGFDIEIAKEVAKDLGVD---LEIKDMDFGNLLAELKLG 120

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG 153
           +ID +         R     + F  + Y   QG ++  +     ++++ L G +I VQ G
Sbjct: 121 KIDFVIAGMTPDEERAK--AVDFSKVYYEAKQGVLVRAEDKDKFTTMADLEGKAIGVQMG 178

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T E        A           +  ++    ++ + DA   ++         N   + 
Sbjct: 179 STQEKIAQGIKGAK-----LKSLGKTTDLVLELKSKKVDALIVELPVAQGYANVNSDLAL 233

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             I P+  S    A A+ +G+ +    +  T   +  
Sbjct: 234 TSISPEYESGGS-AVAVNKGEKDLLAEIQKTLDHLTA 269


>gi|226311779|ref|YP_002771673.1| amino acid ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226094727|dbj|BAH43169.1| amino acid ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 272

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 77/267 (28%), Gaps = 32/267 (11%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGD---------------IKKRGFLKCGINTG 43
           M K       ++  + L  +  S  AS                    K+ G      +  
Sbjct: 1   MKKTWKTIAGVVFSLSLLVSGCSQGASTNSAGGQAGGATAGNASSMTKEAGVFVYAASGE 60

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F+    +G   GFDV+    ++  +  +P  +             ++  + D    +
Sbjct: 61  YQPFSYF-KDGQLTGFDVEIGNEIAKRLGLEPKPVT---SPFSGIIAGVKEGRYDAAIAS 116

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R     + F    Y  G    +     IS++  L G  + V  GTT E    + 
Sbjct: 117 HAITEER--KQQVDFADPYYLSGGQLFVRPDGTISTLEGLKGKEVAVALGTTHEKMARE- 173

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                   +   ++       A    + D    D               +       +S+
Sbjct: 174 -----YTDNIKTYDSDVTALRALEQGKHDVVITDSVVGEIAIAQ---GLKLKKSGSPLSE 225

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                A+ +G+TE  N ++     M+ 
Sbjct: 226 VKHGIAVRKGNTELLNKINEVLKQMME 252


>gi|254245852|ref|ZP_04939173.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124870628|gb|EAY62344.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 333

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 9/205 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F     +G   GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 114 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCTKL---KTKCVWVENDFDGLIPALQ 170

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D ++ +   T  R     +AF    Y      I  +  G + +   L G  + V  
Sbjct: 171 ARKFDAINSDMTITEQR--KHAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 228

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211
           GT  E      +         + ++  +   A  ++ R DA +    +            
Sbjct: 229 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 286

Query: 212 SEHVILPDIISKSPLAPAIIQGDTE 236
                   +     L         +
Sbjct: 287 GFAFAGGTVSDTEILGLGRRLRPAQ 311


>gi|281492351|ref|YP_003354331.1| glutamine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis KF147]
 gi|281376015|gb|ADA65506.1| Glutamine ABC transporter, permease and substrate-binding protein
           [Lactococcus lactis subsp. lactis KF147]
          Length = 714

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K FF   + L  +     + +      +K    +K   ++    F        W G D
Sbjct: 1   MKKLFFALAMMLATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++     +  K++            L++ Q+D +      T  R+ +    F  
Sbjct: 55  VDIMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGVIAGMTITDERKET--FDFSN 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   +S  S L G ++  + GT  +  L +  K +        +    
Sbjct: 110 PYYTSALTIATTKDSKLSDYSDLKGKAVGAKNGTAAQTWLQENQKKYGY--IIKTYSDGV 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            + AA  +        ++  +             + +       P          +   +
Sbjct: 168 HMFAALSSGNIAGAMDEVPVISYAMKQGQD----LAMNFPSISLPGGYGFAVMKGKNSTL 223

Query: 241 VSWTHYAMVT 250
           V   + A+  
Sbjct: 224 VDGFNKALAE 233



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 66/220 (30%), Gaps = 9/220 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+       +     F     +  + G DVD   A++    +   K+++  +  +    +
Sbjct: 258 KKDVYTIASDNSFAPFEFQNDDKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS   D +      T  R+        P    +           I S   L G ++  +
Sbjct: 315 VQSGHADGMMSGMSITDARKQVFDYG-SPYYSSNLTIATSSTDDSIKSWKDLKGKTLGAK 373

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +   L  + K +        F     + ++      +A   D   +   K    + 
Sbjct: 374 NGTASFDYLNAHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQG 428

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            +       I       A+ +G+      +     A + A
Sbjct: 429 QKFATPIKPIPDGQYGFAVKKGNNPELIEMFNNGLANLRA 468


>gi|191639757|ref|YP_001988923.1| ArpJ protein [Lactobacillus casei BL23]
 gi|190714059|emb|CAQ68065.1| ArpJ protein [Lactobacillus casei BL23]
 gi|327383870|gb|AEA55346.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei LC2W]
 gi|327387051|gb|AEA58525.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei BD-II]
          Length = 482

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 36/324 (11%)

Query: 6   FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58
           F++++ +++ F        +  +  L  I+KRG+L  G++           +       G
Sbjct: 11  FIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   + ++  +      +Q   +N      AL++ +ID++      T  RE    + F
Sbjct: 71  ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                ++ Q  ++ K       S++  SG  +  Q  TT E                   
Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  ++ A    ++ D      +   +                   K+P A A+ + ++ 
Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGIDKSSNIG 286
               V+ T   +  A+     Q       ++ +             +   +    +   G
Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFG 300

Query: 287 EALG-------LTKDWTYRIIRHM 303
             +G       L+  W  + I ++
Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324


>gi|168187334|ref|ZP_02621969.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum C str. Eklund]
 gi|169294780|gb|EDS76913.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           botulinum C str. Eklund]
          Length = 280

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 91/263 (34%), Gaps = 29/263 (11%)

Query: 2   YKDFFVSILCLIILFFTSF-----------STNASIL---GDIKKRGFLKCGINTGLVGF 47
            +     I+C +IL   +            + +   L     IKK G L  G       +
Sbjct: 3   KRKKIKFIICGLILTMGATLFVGCGNKNKDAKDGKKLTKIEQIKKSGKLVLGTCADYPPY 62

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                     +  G D+D  + ++  +      ++   ++     L+++S +ID++    
Sbjct: 63  EAQQVKDGKPEIVGIDIDIAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKIDMVISGM 119

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLAD 162
           + T +RE    + F  I Y   Q  I+  +    ++SV  LSG  +  Q  +  E    +
Sbjct: 120 NPTPVREK--EIDFSKIYYRAAQSVIIRDEDKSKLTSVQSLSGKKVGAQITSLQEKIAKE 177

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             K        +   +V E+  + +  + DA   +     A        +    +     
Sbjct: 178 EIK----GAKVVSLGKVNELVTSLKTKKVDAVIVEEPVAKAYVAKYP-GTTIANIKVGKP 232

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
               A  I +G+ E+ + V  T 
Sbjct: 233 NEGSAVGIQKGNKEFVDSVDKTI 255


>gi|53715882|ref|YP_106605.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei
           ATCC 23344]
 gi|67639609|ref|ZP_00438453.1| glutamine-binding periplasmic protein (GlnBP) [Burkholderia mallei
           GB8 horse 4]
 gi|121596704|ref|YP_990725.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei
           SAVP1]
 gi|124381312|ref|YP_001025208.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei
           NCTC 10229]
 gi|126447118|ref|YP_001079562.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei
           NCTC 10247]
 gi|166998960|ref|ZP_02264810.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei PRL-20]
 gi|254177250|ref|ZP_04883906.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei ATCC 10399]
 gi|254203624|ref|ZP_04909985.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei FMH]
 gi|254205493|ref|ZP_04911846.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei JHU]
 gi|254356208|ref|ZP_04972485.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei 2002721280]
 gi|52421852|gb|AAU45422.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|121224502|gb|ABM48033.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei SAVP1]
 gi|126239972|gb|ABO03084.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|147745863|gb|EDK52942.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei FMH]
 gi|147755079|gb|EDK62143.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei JHU]
 gi|148025191|gb|EDK83360.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei 2002721280]
 gi|160698290|gb|EDP88260.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei ATCC 10399]
 gi|238520180|gb|EEP83642.1| glutamine-binding periplasmic protein (GlnBP) [Burkholderia mallei
           GB8 horse 4]
 gi|243064782|gb|EES46968.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei PRL-20]
 gi|261826254|gb|ABM99403.2| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia mallei NCTC 10229]
          Length = 250

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 93/283 (32%), Gaps = 39/283 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +I+ L ++  ++   +A           L  G +T  + F   + +  + GFD+
Sbjct: 3   RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++          +  P++      A Q++ ID+          R     + F   
Sbjct: 53  DLWAEIAK---GAGWTYKIQPMDFAGLIPAQQTQNIDVALSGMTIKEERRK--AIDFSDP 107

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A R DA     +      + N+      +    +S         +G       
Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282
                 A V AE        + ++  D     + +++ G +  
Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248


>gi|24372630|ref|NP_716672.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shewanella oneidensis MR-1]
 gi|24346666|gb|AAN54117.1|AE015549_3 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shewanella oneidensis MR-1]
          Length = 244

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 17/219 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD++  + ++         ++   +     
Sbjct: 23  KSEDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
            +AL S +ID ++     T  R+    + F    Y   Q  +++K    I ++  +    
Sbjct: 80  IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNESIHTLDDIKDKH 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ G+T +        +         F    E     +  + D    D          
Sbjct: 138 FAVQLGSTAD------MMSKKYTQKVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           N    +  ++           A+ +   E  N ++ T  
Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINHTLK 227


>gi|326384738|ref|ZP_08206415.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326196546|gb|EGD53743.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 485

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 70/236 (29%), Gaps = 16/236 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKA-NGDWKGFD 60
                +L ++       S            G   L+ G       F+      G   G+D
Sbjct: 2   RALAPLLAVLFAVAGLLSACGGSDDRFGDNGGGVLRVGTEGTYAPFSFHDPATGQLSGYD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +     + +++       F AL + + D+++     T  R+    L    
Sbjct: 62  VDVANAVAKQMG---MRAEFVEAPWDSLFAALGADRFDVVANQVTVTPERQAKYAL--ST 116

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    +       I SV  L G ++  Q  T+    +A    A          E  
Sbjct: 117 PYAIGEGVVVTRSDDDSIRSVDDLGGRTVA-QTATSNWTQVAKDAGA-----DVQTVEGF 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +     R  R DA   D  A+YA        S  +      +    A A  +G  
Sbjct: 171 TQAITLLRQGRVDATVNDSIAVYAYLAETGDTSVKIAAKTGQTSE-QAFAANKGSP 225


>gi|323127408|gb|ADX24705.1| cystine-binding protein [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 287

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 79/229 (34%), Gaps = 14/229 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   +  + L  L  T+ ++     S    IK++G LK          +    + +  
Sbjct: 1   MKKSVTLLSIGLASLLLTACASHQSQESSWDAIKEKGVLKVATPGTYQPTSFYNDDNELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++VD  + +   +     K++++     + F ++ S ++DI   N D T  R+    ++
Sbjct: 61  GYEVDMVKEIGKRL---DIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNIS 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIV 175
                   G   +        S   LS         A  T  + LA    A  + Y  + 
Sbjct: 118 TPYKYGVGGM-IVRADGSSNMSKKDLSDWKGKKAAGASGTEYMKLAQKQGAKLVTYDNVT 176

Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS 222
            +            R D    D  A   +   + +  P+ +V + D+  
Sbjct: 177 GDVY---LNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQY 222


>gi|320333239|ref|YP_004169950.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM
           21211]
 gi|319754528|gb|ADV66285.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           maricopensis DSM 21211]
          Length = 247

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 14/223 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  L  I+K G ++ G N     F   + +   KGF+ D   A++  +       Q++ 
Sbjct: 15  QARDLAAIQKAGVIRIGTNAEFKPFTYYEGS-TMKGFEYDLGNAIAKKLGVKA---QWIN 70

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                  + L   + D++  +   T  R+    + F    ++   G I+ K  G  +V+Q
Sbjct: 71  QPFDGLLIGLNQDRFDLVISSHGITPERQK--AVDFSNP-HYCSGGLIVSKTGGPKTVAQ 127

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G ++  Q GTT    +               +    +   A    R +A   +    Y
Sbjct: 128 LKGKTVSTQIGTTYVSAIEKQLG----NRAVKTYPDNSKALQALMMGRVNAMVNEK--FY 181

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           AL+     P +     D++ +  L  A+ +G++     V+   
Sbjct: 182 ALEAIKANPGQLQQ-GDLMFQEKLGMAVKKGNSGLLKAVNTAL 223


>gi|227532776|ref|ZP_03962825.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189610|gb|EEI69677.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 482

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 107/324 (33%), Gaps = 36/324 (11%)

Query: 6   FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58
           F++++ +++ F        +  +  L  I+KRG+L  G++           +       G
Sbjct: 11  FIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   + ++  +      +Q   +N      AL++ +ID++      T  RE    + F
Sbjct: 71  ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                ++ Q  ++ K       S++  SG  +  Q  TT E                   
Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  ++ A    ++ D      +   +                   K+P A A+ + ++ 
Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD--------------VQRFLGIDKS 282
               V+ T   +  A+     Q       ++ +                 +   L +   
Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGTLYTLIFAVLTVFFG 300

Query: 283 SNIGEAL---GLTKDWTYRIIRHM 303
           + IG  L    L+  W  + I ++
Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324


>gi|167461578|ref|ZP_02326667.1| extracellular solute-binding protein family 3 [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322384241|ref|ZP_08057950.1| high affinity arginine ABC transporter binding lipoprotein-like
           protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321150889|gb|EFX44315.1| high affinity arginine ABC transporter binding lipoprotein-like
           protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 265

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 75/256 (29%), Gaps = 21/256 (8%)

Query: 1   MYKDFFVSI-LCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKA 52
           M K     + L L                         G L    +     +     V  
Sbjct: 1   MKKLAASVLSLVLAGSLIAGCGQKDKNAGDAASTAAPNGKLVLATSADYPPYEFHKLVDG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                GFD++  + ++  +  +   ++   +       ALQS   DI+      T  R+ 
Sbjct: 61  KDSIIGFDIEIAKEIAKDMGKE---LEVKDMRYDALLAALQSGTADIVIAGMTPTPERQK 117

Query: 113 SLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              + F  I Y      +     K    +   L G  I +Q G+  E        A    
Sbjct: 118 --NVDFSDIYYTAQHAVVTLEENKDKYKNPEDLKGKKIVIQKGSIQEEIAKRIEGA---- 171

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                  ++ ++    +  R DA   +     A  +  ++      L      +  A AI
Sbjct: 172 -DLQELGKIGDLIQELKNKRADASIIEKPV-AANYVKANKGLAITDLTLQAEDTGSAVAI 229

Query: 231 IQGDTEWYNIVSWTHY 246
            +G+ E  + V+ T  
Sbjct: 230 KKGNKELVDQVNKTLK 245


>gi|289549952|ref|YP_003470856.1| Cysteine ABC transporter, substrate-binding protein [Staphylococcus
           lugdunensis HKU09-01]
 gi|315659421|ref|ZP_07912284.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus lugdunensis M23590]
 gi|289179484|gb|ADC86729.1| Cysteine ABC transporter, substrate-binding protein [Staphylococcus
           lugdunensis HKU09-01]
 gi|315495540|gb|EFU83872.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus lugdunensis M23590]
          Length = 259

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 12/211 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    +++ L+ +     +  +S          LK G       F          G+D+D
Sbjct: 2   KRLLFTVIALVFVLAACGNGGSSKDDKASSDKTLKVGTEGTYAPFTYHDKQDKLTGYDID 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +A++ A       +++   +    F  L + + D+++        RE      F    
Sbjct: 62  VIKAVAKAEGYK---LKFNETSWDSMFAGLDAGRFDVIANQVGINKERE--QKYQFSTPY 116

Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +     ++   +K I S   + G  +  Q  T+    LA    A          +   +
Sbjct: 117 TYSNAVLVVRDNEKDIKSFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGFNQ 170

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
                 ++R D    D  +            
Sbjct: 171 SMDLLLSNRVDGTFNDSLSYLDYTKQKPNAK 201


>gi|260494694|ref|ZP_05814824.1| amino acid-binding protein [Fusobacterium sp. 3_1_33]
 gi|260197856|gb|EEW95373.1| amino acid-binding protein [Fusobacterium sp. 3_1_33]
          Length = 242

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 83/256 (32%), Gaps = 23/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + ++ L+ +  +             K   +  G N     F  +       GFD
Sbjct: 1   MKKFFKLMLMSLLSVVISISVFA--------KSNVVYVGTNAEFAPFEYL-EKNKIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K+ID++      T  RE    +AF  
Sbjct: 52  IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKIDMVIAGMSATPEREK--AVAFSK 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  I       + S   LSG  + V  G T +  ++              F   
Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLSGKKVGVMLGFTGDTVVSKI-----KGVKIERFNAA 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ DA   D     A K T +   + VI      +   A A  + D E  N
Sbjct: 162 YAAILALSQNKVDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218

Query: 240 IVSWTHYAMVTAEELG 255
            V+     +    E  
Sbjct: 219 KVNAALDKIKANGEYD 234


>gi|257876942|ref|ZP_05656595.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257811108|gb|EEV39928.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 493

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 22/263 (8%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEV-- 50
           M +       + I+  ++ FF     +A     I   +K+ G L  G++     +     
Sbjct: 1   MKRFSKGTVLLGIITALLPFFFIGQAHAEETDPIYEKVKENGVLVVGLSADYAPYEFRAN 60

Query: 51  -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                +  G D+   + ++  +  D   ++   L       AL++ +ID++      T  
Sbjct: 61  VDGKNEIVGIDISIAQKIADDLGVD---LKIEELGFDALLGALKTGKIDVVISGMAATDE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R     + F        Q  ++  +      S +   G ++  Q  TT E          
Sbjct: 118 RRK--EVNFTDTYMEVQQTVLVRAEDADRFQSTADFDGVAVGAQRQTTQEELANTEL--- 172

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    +RV ++    ++ + DA   +     A    ND  +    +         A
Sbjct: 173 -TGSTVTSLQRVPDLITNLKSRKIDAIVMEGPVAEAYVTANDTLALAENVTFENGVKETA 231

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
            AI +        ++ +   +++
Sbjct: 232 IAISKEAPVLLEKLNSSIETIIS 254


>gi|160895809|ref|YP_001561391.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160361393|gb|ABX33006.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 256

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 99/274 (36%), Gaps = 21/274 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F  I    +  +T+    A     I+K G L+         FA  +      GF+
Sbjct: 1   MKR--FTVIAAAALALWTAAGVQARPFEAIQKEGTLRLATEGYYAPFAHFEGK-QLTGFE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + +++ +        +  ++       LQ  + D++  +   T  RE    + F  
Sbjct: 58  VELAQMMAAKMGVKYE---WKTISFDALLTGLQQDRWDLVISSHGITPEREK--AVTFTQ 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++     +M     I S   L+G ++ VQ GTT    +             + F   E
Sbjct: 113 P-HYCSGAIVMSLDPAIRSAKDLAGKTVSVQTGTTYMQYMEKNLP---GIKRLVNFPTNE 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  + R DA+  +     A +L    P+  +   +++    +A A+ + +    + 
Sbjct: 169 AARNALLSKRVDAWVTERFI--AKELQQKNPNAQLKQGELLLVERIAAAVAKDNKSLAD- 225

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
                 A   A +  +   +  ++S+   + D++
Sbjct: 226 ------AWNKAFKEALADGSYAKLSQKYFHEDIR 253


>gi|325570568|ref|ZP_08146294.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156414|gb|EGC68594.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 493

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 22/263 (8%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEV-- 50
           M +       + I+  ++ FF     +A     I   +K+ G L  G++     +     
Sbjct: 1   MKRFSKGTVLLGIITALLPFFFVGQAHAEETDPIYEKVKENGVLVVGLSADYAPYEFRAN 60

Query: 51  -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                +  G D+   + ++  +  D   ++   L       AL++ +ID++      T  
Sbjct: 61  VDGKNEIVGIDISIAQKIADDLGVD---LKIEELGFDALLGALKTGKIDVVISGMAATDE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R     + F        Q  ++  +      S +   G ++  Q  TT E          
Sbjct: 118 RRK--EVNFTDTYMEVQQTVLVRAEDADRFQSTADFDGVAVGAQRQTTQEELANTEL--- 172

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                    +RV ++    ++ + DA   +     A    ND  +    +         A
Sbjct: 173 -TGATVTSLQRVPDLITNLKSRKIDAIVMEGPVAEAYVTANDTLALAENVTFENGVKETA 231

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
            AI +        ++ +   +++
Sbjct: 232 IAISKEAPVLLEKLNSSIETIIS 254


>gi|259047073|ref|ZP_05737474.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein/permease protein [Granulicatella adiacens ATCC
           49175]
 gi|259036123|gb|EEW37378.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein/permease protein [Granulicatella adiacens ATCC
           49175]
          Length = 478

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 9/205 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +        +     F     NG++ G D++  ++++ A   +  ++++  L       A
Sbjct: 32  ETKKYVIATDITFAPFEYQDTNGEYVGIDIELMKSIAEA---EGFEVEFKALGFNAAVQA 88

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++ Q+D +      T  R+      F    Y  G G  + K   I+S+S L G  + V+
Sbjct: 89  LEAGQVDAVMAGMGITDERK--QKFNFTDSYYDSGIGMGVSKNSDITSLSDLKGKKVAVK 146

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT                +    FE    +         DA   D   L     +N+ P
Sbjct: 147 LGTQGATYAESI--KSKYGFTITTFEDSSSMYQDVMVGNSDALFEDYPVLAYSITSNNLP 204

Query: 212 SEHVILPDIISKSPLAPAIIQGDTE 236
               +     +K+    A+ +G+  
Sbjct: 205 --LKMTDHNENKTEYGVAVNKGENA 227


>gi|148543533|ref|YP_001270903.1| extracellular solute-binding protein [Lactobacillus reuteri DSM
           20016]
 gi|184152939|ref|YP_001841280.1| ABC transporter substrate binding component [Lactobacillus reuteri
           JCM 1112]
 gi|227363512|ref|ZP_03847632.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM2-3]
 gi|325681881|ref|ZP_08161399.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM4-1A]
 gi|1617328|emb|CAA68052.1| collagen binding protein [Lactobacillus reuteri]
 gi|148530567|gb|ABQ82566.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183224283|dbj|BAG24800.1| ABC transporter substrate binding component [Lactobacillus reuteri
           JCM 1112]
 gi|227071449|gb|EEI09752.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM2-3]
 gi|324978525|gb|EGC15474.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri MM4-1A]
          Length = 263

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 64/215 (29%), Gaps = 18/215 (8%)

Query: 1   MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K   ++I  L +          + ++++  ++  +G L  G+      ++    N 
Sbjct: 1   MKFWKKALLTIAALTVGTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  +A++  +        ++P         L S + D++  N   T  R    
Sbjct: 60  KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           I+     I S+  + G  I    GT     +         K +  
Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVV------KKYKGNLT 168

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                       +  R         A YA    N 
Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203


>gi|326622546|gb|EGE28891.1| glutamine ABC transporter, glutamine-binding periplasmic protein
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
          Length = 220

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 74/210 (35%), Gaps = 12/210 (5%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
              +T  V F   + +  + GFDVD   A++  +  D       P++      ALQ+K I
Sbjct: 1   MATDTAFVPFEFKQGD-KYVGFDVDLWDAIAKELKLDY---TLKPMDFSGIIPALQTKNI 56

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTT 156
           D+       T  R+    + F    Y  G   ++      I SV  L G  + V++GT +
Sbjct: 57  DLALAGITITDERKK--AIDFSDGYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGS 114

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
                DY KA+        F  ++        +R DA   D   +     T     +   
Sbjct: 115 V----DYTKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKA 169

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           + + +       A  +G  E    V+    
Sbjct: 170 VGESLEAQQYGVAFPKGSDELREKVNGALK 199


>gi|114764748|ref|ZP_01443931.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114542797|gb|EAU45819.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Roseovarius sp. HTCC2601]
          Length = 276

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 78/227 (34%), Gaps = 10/227 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+++G L+ G+      F     +G   G +V+  + +    F      +   + ++ 
Sbjct: 31  ASIEEQGVLRIGVKCDSPPFGASGIDGTPIGIEVEMAKKIGEYAFGSEEGAELSCVTSES 90

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R  +L S +ID++         RE    + F  I ++     ++     +  +S L+G +
Sbjct: 91  RIPSLNSGKIDLILATLGRFPAREEV--IDFSNIYFWGTSNVLVPVDSPVQELSDLAGET 148

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + +  G +    L +           +      +   A    R   Y GD   +Y L   
Sbjct: 149 LLIVKGGSQIRWLEENIP----DIEMMQLNTTADGIQALLQGRAAGYVGDGGLIYTL--- 201

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
                +  ++ + +        + + + E    V+      + AE  
Sbjct: 202 AGNYDQLRVVEEGLDLGVNGIGLRKDEPELMAFVNAALD-QLRAENF 247


>gi|227545190|ref|ZP_03975239.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus reuteri CF48-3A]
 gi|300909133|ref|ZP_07126594.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
 gi|68160752|gb|AAY86822.1| lr0793 [Lactobacillus reuteri]
 gi|227184836|gb|EEI64907.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus reuteri CF48-3A]
 gi|300892998|gb|EFK86357.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus reuteri SD2112]
          Length = 263

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 18/215 (8%)

Query: 1   MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K   ++I  L +          + ++++  ++  +G L  G+      ++    N 
Sbjct: 1   MKFWKKALLTIAALTVSTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  +A++  +        ++P         L S + D++  N   T  R    
Sbjct: 60  KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           I+     I S+  + G  I    GT     +         K    
Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVV------KKYKGSLT 168

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                       +  R         A YA    N 
Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203


>gi|326777555|ref|ZP_08236820.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Streptomyces cf. griseus XylebKG-1]
 gi|326657888|gb|EGE42734.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Streptomyces cf. griseus XylebKG-1]
          Length = 695

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 76/239 (31%), Gaps = 7/239 (2%)

Query: 20  FSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77
            +  +      K     L+ G+     G ++       ++G+DVD   A++ ++     +
Sbjct: 425 GAAGSGSQERWKDTHDTLRIGVKDDQPGLSKFDKKTRTYRGYDVDLAYAIAESMGYGKGE 484

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHK 133
           + +  +    R  AL++KQ+D++  +   T  R+        + F    Y   + F++ +
Sbjct: 485 VSFTTVATDYRSTALKTKQVDLVIASYSITDDRKTASPGGYSVDFAGPYYDASRSFLVRE 544

Query: 134 KKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K    +++  S    + V+  T  E T                    ++        + D
Sbjct: 545 KSSKYTINDSSDLVDLRVEVCTARESTYETELPKRGFTMAKSQPNTYQDCLDKLLDPKSD 604

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            Y      +         P +   L  I        A+    T     V      ++  
Sbjct: 605 VYAVASDDIILAGYVKANPGKVRQLEPINGAEGYGVAMRPKSTLLKGEVCSALRTILAG 663


>gi|325978020|ref|YP_004287736.1| inner membrane amino-acid ABC transporter permease yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325177948|emb|CBZ47992.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 517

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 88/280 (31%), Gaps = 29/280 (10%)

Query: 2   YKDFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVK---AN 53
            K    + +   I+   +      S   S +  IK+ G L    N G   +        +
Sbjct: 248 KKLTLTTAIIAAIVGIFALNHGGASKTVSSVEKIKESGQLVVATNIGYAPYEFYDLTSGH 307

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D+ F + L+  +     K+    +N       + S   DI       T  RE  
Sbjct: 308 KKAVGVDIAFAQQLADKL---QVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKEREK- 363

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F           ++ K+     +S+  L+  +I VQ  TT    + D  K      
Sbjct: 364 -SVDFTENYVKQTNKVVVRKEVASQYTSIESLASTTIAVQKSTTQADVVEDDIK----PQ 418

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +    + ++       + DA   D +       +ND    +  +    +    A A+ 
Sbjct: 419 QIVALSSLPDVFLNLLQGKVDAVVADDTVADQYIASNDN-LTYADIELPGTTE-TAMALT 476

Query: 232 QGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
           +G++     V            +    AE   + QKN  +
Sbjct: 477 KGNSSLKEYVDQLIEQDKKDGTFDKWMAEYSELAQKNTTE 516


>gi|159904734|ref|YP_001548396.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159886227|gb|ABX01164.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 264

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 23/266 (8%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51
           M     + I+     +++      S+ A    D     +++ G LK G+      F    
Sbjct: 1   MNNKLLMLIIGIIGTVLMFSGCVSSSEAQTAEDNSWKNVEENGVLKVGLCAAWPPFESRN 60

Query: 52  A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+ +GFD+D   ALS  +  +   ++ +  + +  F  L     D L          
Sbjct: 61  ETTGEIEGFDIDLANALSEELGVE---VEIIDADWQALFGGLSKGDYDTLITCMALKTAY 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
             ++ L      Y   +  ++ K    I++VS LSG  + VQ  T +E  +     A + 
Sbjct: 118 AENVEL--SDPYYELNEVIVVRKDNTEINNVSDLSGKIVGVQLATGSEEAV----DALSG 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 +    E     + +R DA     +  YAL   ++ P + ++L + +S SP+   
Sbjct: 172 IQEIKRYNYNNEAFIDLQNNRVDAVVVGYT--YALVQMSEYP-DLMVLDEPVSSSPVVMV 228

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
             QG  E    ++     ++ + +  
Sbjct: 229 QSQGAEELTAKLNEALSDIIESGKYD 254


>gi|294810980|ref|ZP_06769623.1| Glutamine-binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|294323579|gb|EFG05222.1| Glutamine-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 315

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 17/246 (6%)

Query: 7   VSILCLIILFFTSFS---TNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++     +L  T+       A+    +    +G L    +     F   + +G+  GFDV
Sbjct: 51  LAAAVTGVLITTACGTGDQGATTADGVPLVAKGKLTTCTHLPYPPFQF-ERDGEVVGFDV 109

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
                ++  +      I   P    +    L S + D+ +     T  R+    + F   
Sbjct: 110 ALIDRVAKDLGVRQE-ILDTPFENFKTGAFLNSGECDLAAAGMTITEERKK--NVDFSVP 166

Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +   Q  +     GI S++++      +  Q+GTT E  + +        + P+ FE  
Sbjct: 167 YFDATQALLATAGSGIRSLAEVEAEKRKLGAQSGTTGESHVQEQ------GFDPVAFESS 220

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + +    R  + DA   D   +              +   I +      ++ +G+     
Sbjct: 221 DAVLNGLRTGQVDAVVIDYPVVQGWLKDPANARAFRLGQSIETGEQYGFSVKKGNDALRA 280

Query: 240 IVSWTH 245
            +    
Sbjct: 281 AIDKVI 286


>gi|282861575|ref|ZP_06270639.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Streptomyces sp. ACTE]
 gi|282563391|gb|EFB68929.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Streptomyces sp. ACTE]
          Length = 628

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 6/213 (2%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+     G +    +  +KGF+VD  +A++  +  D  ++Q++ +N+  R   L++
Sbjct: 381 VLRIGVKRDQPGLSVKSGD-TYKGFEVDLAKAVARELGFDEGQVQFVSVNSGNRSDYLRT 439

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D++      +  RE    +AF    Y   +G ++ K +  + +S L          T
Sbjct: 440 GRADLVLATYSISDEREREEKVAFAGPYYQALKGLLVRKNRPYNDLSDLQRDPGAEVC-T 498

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD--AYTGDISALYALKLTNDRPS 212
             +     + K   +    ++    E+   A    R D  A   D   +  L       +
Sbjct: 499 ARDSVYESWIKTEGLAGQQVLRSGFEDCVKALLDPRTDVYAVATDDVIVAGLADKYHEKT 558

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               L  +        A     T  +  V    
Sbjct: 559 --KALDSLGGAEGYGVATDAERTGLHTEVCAAL 589


>gi|254229166|ref|ZP_04922585.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio
           sp. Ex25]
 gi|262395516|ref|YP_003287369.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
 gi|151938251|gb|EDN57090.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio
           sp. Ex25]
 gi|262339110|gb|ACY52904.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
          Length = 272

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 19/255 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L L I   T    + +   +  IK+RG L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKATITALLGLAIAMPTIAKEDVATPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L+        K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAEDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F       G     +K+        S        I  + G  T     + F        
Sbjct: 115 LFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQIARETFPKAK---- 170

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F+   +           A            + +      +   + +SK   A A+  
Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVRL 229

Query: 233 GDTEWYNIVSWTHYA 247
           G+ +     +    A
Sbjct: 230 GEEDKKAFFNKWIEA 244


>gi|227818922|ref|YP_002822893.1| amino acid ABC transporter periplasmic protein [Sinorhizobium
           fredii NGR234]
 gi|227337921|gb|ACP22140.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 271

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 88/268 (32%), Gaps = 32/268 (11%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             S+L   +   ++ ++ A       + G L+ G       F+   A+G+  GFD D   
Sbjct: 7   LRSVLASGLFLVSAAASQA-------EEGVLRIGTEGDAPLFSMADADGNVTGFDADIAN 59

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            + + +     K +++  +      ++ S + D++      T  R+    + +       
Sbjct: 60  GICAEL---KLKCKFVVQSFSTLVPSMDSDRFDVIISGLGITAERQK--KIDYSIPYATT 114

Query: 126 GQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              F++ K   ++ +         L G S+ V  GTT    +  +            ++ 
Sbjct: 115 PLYFVVAKDSPLAGLKSLDEIVKALDGKSLGVVTGTTYAKFIQKHVP----GADLKTYDA 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--------LAPAI 230
             +  A   A R DA  GD         T    +    +   I            +   +
Sbjct: 171 TTQQTADLAAGRLDAAFGDSPTWADFLAT-PDGAGFTRVDVKIMAMDDPTSLGHGMGVGM 229

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQ 258
            +G++E    +      MVT  E+    
Sbjct: 230 RKGNSELKAKLDAALCKMVTEGEVKNAS 257


>gi|209543097|ref|YP_002275326.1| family 3 extracellular solute-binding protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530774|gb|ACI50711.1| extracellular solute-binding protein family 3 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 281

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 89/281 (31%), Gaps = 34/281 (12%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                +  ++         A  L DI+  G L  G+N  L   A   +    +GFDVD  
Sbjct: 19  ILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVG 78

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL++ +   P   + +P+++  R   L + ++D++      T  R     +AF    Y 
Sbjct: 79  TALAARLGVSP---RLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAA--AIAFSAPLYA 133

Query: 125 DGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +    I      +  +  L+     +    G+T    L  +          ++     + 
Sbjct: 134 EEFAIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKA----PILLLGSYPDA 189

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWY 238
             A    R DA        Y  +     P     +      +P A      + Q DT+  
Sbjct: 190 VRALAQGRGDAMVD--VIEYVGRFLAAEPQAGWTIQ--RGFAPAAGEDCVGVAQSDTDLL 245

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
            +V  T                 +     T     +R+ G+
Sbjct: 246 RVVDGTL---------------ADLKRDGTIQAAYRRWFGV 271


>gi|297584864|ref|YP_003700644.1| family 3 extracellular solute-binding protein [Bacillus
           selenitireducens MLS10]
 gi|297143321|gb|ADI00079.1| extracellular solute-binding protein family 3 [Bacillus
           selenitireducens MLS10]
          Length = 249

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 79/252 (31%), Gaps = 22/252 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M K      +   +L   +   ++ +              ++  V F  +    G+  GF
Sbjct: 1   MKK-LAGLTIGSGLLMLAACGDDSDMP-------TYTVATDSSYVPFEFLDTETGEMVGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    ++  +  +   I    +        + + + DI       T  R       F 
Sbjct: 53  DIDLINEIADRVGFE---IDLEVVEFDGIVSGMGTGRYDIGIAGMTITEERAE--NFDFS 107

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G    +      I S+  + G  +  +A TT+E  L +     N       F  
Sbjct: 108 DPYYDAGLILAVRADDDEIQSIDDVDGRPVATRAATTSETYLME-----NTDAEVRTFPE 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +        A R DA   D+       + N+   E   + D ++      A  QG +E  
Sbjct: 163 IVNAYQDLVAGRVDAVIYDVP-NVLYYIDNEAIGEMRAVGDTLTGEQYGIAFPQG-SELV 220

Query: 239 NIVSWTHYAMVT 250
           + V+     M+ 
Sbjct: 221 DEVNAALAEMME 232


>gi|218889054|ref|YP_002437918.1| putative binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
 gi|218769277|emb|CAW25037.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa LESB58]
          Length = 256

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 68/239 (28%), Gaps = 19/239 (7%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+++   +   +A +L D+ +RG L+  +      F   +  G   GF+ +    L++ 
Sbjct: 7   LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +   P    ++          LQS + DI          R       F           I
Sbjct: 66  LAVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 120

Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +   +     S+  L G  + V  GT                 +   +    E      +
Sbjct: 121 VRADETRQFKSLEDLKGLRLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175

Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R DA   D         +          + P      P      + + ++   ++   
Sbjct: 176 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 230


>gi|169835618|ref|ZP_02868806.1| Amino acid-binding protein [candidate division TM7 single-cell
           isolate TM7a]
          Length = 269

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 75/216 (34%), Gaps = 14/216 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G N G   F     N +  GFDVD  + ++         ++   ++      AL S
Sbjct: 44  VIVMGTNAGFKPFEYKNGN-EIVGFDVDIAKEIAKKTNK---TLKIEDMSFDGLLPALNS 99

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +Q+D++      T  RE      F    Y   Q  I+ K   I +  QL G  I VQ GT
Sbjct: 100 RQVDMVIAGMSVTPEREK--NALFSKSYYSAAQRMIIKKGSSIKNKYQLEGKKIGVQLGT 157

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +   +    AH        F     +     A   D    D +             E 
Sbjct: 158 TGDTLASKIKGAH-----IAQFPTAPSVLTELNAGGVDVAILDNAPAEQYTTGFK---EL 209

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           ++LP  +S    A AI  G+ +  + ++     M  
Sbjct: 210 IVLPGSLSNEDYAIAIKLGNNKLLDQINQVIDEMKQ 245


>gi|315124270|ref|YP_004066274.1| cjaC protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315017992|gb|ADT66085.1| cjaC protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 189

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 14/199 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++++ L+ LF  + S + +   +      LK G       F     N    GFD
Sbjct: 1   MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
            D    ++     +  KI ++  N      AL++ +ID+++     T  R     + F  
Sbjct: 58  TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P          +     + + + L G  I VQ GT     L +              + +
Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167

Query: 180 EEIDAAYRAHRCDAYTGDI 198
                A + ++ DA   D 
Sbjct: 168 NIAVLALKNNKIDAIVADQ 186


>gi|186477008|ref|YP_001858478.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184193467|gb|ACC71432.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 266

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 76/218 (34%), Gaps = 11/218 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +I K G LK  +      F  V  +   +G+D+D    L+ ++     K++ +P+N+  
Sbjct: 35  DNITKSGVLKVAVPEDYPPFGSVGPDLKPQGYDIDTAALLAKSM---NVKLELVPVNSAN 91

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R   LQ+ ++D++  +   T  RE    + F        QG        +SS + L+G +
Sbjct: 92  RIPYLQTNKVDLVISSLGKTAEREKV--IDFSSAYAPYYQGVFGPADLKVSSPADLTGKT 149

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +    G   E+ L               FE      AA+ + +            A+   
Sbjct: 150 VGATRGALEEIALTQMAP----NATIKRFEDNNATIAAFLSGQVQLIAAGNIVAAAILA- 204

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P        +I  SP    + + +      V    
Sbjct: 205 -KNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAAI 241


>gi|168183032|ref|ZP_02617696.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Bf]
 gi|182673818|gb|EDT85779.1| polar amino acid uptake ABC transporter, PAAT family, amino
           acid-binding protein [Clostridium botulinum Bf]
          Length = 274

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 74/249 (29%), Gaps = 8/249 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           K  F+S+  ++ L  T  +         K +  +K G +     F  +   +   +GF++
Sbjct: 7   KKIFLSMSLVVALGVTLTACAQKNKEIKKNKNTIKIGTSGQYYPFTFIDKDSNKVQGFEI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    +       P    +   +       L + +ID ++     T   +      F   
Sbjct: 67  DIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSKP 121

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERV 179
             + G      K    I S+  L G ++  Q GT    ++ DY   +         +   
Sbjct: 122 YVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNTGEDIKTKQYNSF 181

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +       R DA   D  A       +    +    P    ++         + E   
Sbjct: 182 SGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEKIE 241

Query: 240 IVSWTHYAM 248
            ++     M
Sbjct: 242 KINKALDDM 250


>gi|319427458|gb|ADV55532.1| ABC arginine transporter, periplasmic ligand-binding subunit, ArtI
           [Shewanella putrefaciens 200]
          Length = 244

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 18/225 (8%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD+D  + ++         ++   +     
Sbjct: 23  KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
            +AL S +ID ++     T  R+    + F    Y   Q  +++K    I ++  + G  
Sbjct: 80  IVALNSGKIDFIASGMTITAERQA--NVNFSDSYYEATQVVLVNKDNDSIHTLEDIKGKH 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ GTT +        +     +   F    E     +  + D    D          
Sbjct: 138 FAVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNAKVDLVLFDSEPAANYLAK 191

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           N    E  ++           A+ +   E    ++ T  A + A+
Sbjct: 192 NP---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232


>gi|307308008|ref|ZP_07587726.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306901412|gb|EFN32016.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 248

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 72/237 (30%), Gaps = 22/237 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      + ++   + S +     L        LK G +T       V    G   GF
Sbjct: 1   MKKLMIALAVAVLASGWASAADLGGKL--------LKVGSDTTSPPMESVDPATGQIVGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+ + I        ++       F AL     D+++     T  R+    + F 
Sbjct: 53  DIDVVNAICAKINCQAE---FVTTGWDGIFAALDQGNFDLVASGVSITEERKK--AMDFS 107

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                + Q  +M  +    S+      G  +  QA TT            N     + ++
Sbjct: 108 DPYIVNSQAVLMRVEDQGVSLEDFKSKGKKLSAQANTTDAQVAEGVVGKEN----VVAYD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                  A +    D    + +   A +       E V+    +   PL     +GD
Sbjct: 164 SFSAAIIALKNKDVDGVVINGANAAAYEREFV--GELVVAIRDLESDPLGLVFRKGD 218


>gi|301067834|ref|YP_003789857.1| amino acid ABC transporter permease/periplasmic protein
           [Lactobacillus casei str. Zhang]
 gi|300440241|gb|ADK20007.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei str. Zhang]
          Length = 482

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 36/324 (11%)

Query: 6   FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58
           F++++ +++ F        +  +  L  I+KRG+L  G++           +       G
Sbjct: 11  FIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   + ++  +      +Q   +N      AL++ +ID++      T  RE    + F
Sbjct: 71  ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                ++ Q  ++ K       S++  SG  +  Q  TT E                   
Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  ++ A    ++ D      +   +                   K+P A A+ + ++ 
Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGIDKSSNIG 286
               V+ T   +  A+     Q       ++ +             +   +    +   G
Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFG 300

Query: 287 EALG-------LTKDWTYRIIRHM 303
             +G       L+  W  + I ++
Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324


>gi|257467275|ref|ZP_05631586.1| amino acid-binding protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 238

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L  G N     F  +   G   GFD++   AL+  +  D   ++   +       ALQ
Sbjct: 23  KTLYVGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 78

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
            K++D++      T  R+    ++F    +   Q  I  K K I    +LSG  + V  G
Sbjct: 79  MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKKVGVMLG 136

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            T +  ++D   A         F+       A    + DA   D         +     +
Sbjct: 137 FTGDAVVSDIKGAK-----VQRFDTTYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 188

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             I      +   A A+ + D    + ++   
Sbjct: 189 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 220


>gi|199599469|ref|ZP_03212861.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|199589641|gb|EDY97755.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
          Length = 475

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 98/312 (31%), Gaps = 31/312 (9%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++ L L +      ST A        +     G +     F     +  + G D+D  +A
Sbjct: 1   MAALILTLSLAMPVSTQA-------AKKTYVIGTDVTYAPFEFADKHNQYVGIDIDLMQA 53

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++ A   +  ++   PL       AL++ QID +      T  R+    +      Y   
Sbjct: 54  IAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--SDPYYKTA 108

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
               + K  G++ +  L G  + ++ GT                +  + F+    +    
Sbjct: 109 VAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDSNNMYQDV 166

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---------W 237
                 A   D   L     T     +  +       S    A  +G ++          
Sbjct: 167 ITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELDQKFNAGL 223

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             + +   YA + A+ LG   +   + +   T    + FLG+ + +      GL +    
Sbjct: 224 KKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNGLRETMVV 283

Query: 298 RIIR-----HMG 304
            I+       +G
Sbjct: 284 TIVAIFFATAVG 295


>gi|254303822|ref|ZP_04971180.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148324014|gb|EDK89264.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 242

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 83/256 (32%), Gaps = 23/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++ L+ +  +             K   +  G N     F  +       GFD
Sbjct: 1   MKKFVKLMLISLLSIVISISVFA--------KNNVVYVGTNAEFAPFEYLD-KNKIVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K++D++      T  R+    +AF  
Sbjct: 52  IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKVDMVIAGMTATPERQK--AVAFSK 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  I       + S   L+G  + V  G T +  +++             F   
Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLAGKKVGVMLGFTGDTVVSEI-----KGVKVERFNAA 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ DA   D     A K T +   + VI      +   A A  + D E  N
Sbjct: 162 YAAILALSQNKIDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218

Query: 240 IVSWTHYAMVTAEELG 255
            V+     +    E  
Sbjct: 219 KVNAALDKIKANGEYD 234


>gi|306831123|ref|ZP_07464284.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304426689|gb|EFM29800.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 522

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 88/280 (31%), Gaps = 29/280 (10%)

Query: 2   YKDFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVK---AN 53
            K    + +   I+   +      S   S +  IK+ G L    N G   +        +
Sbjct: 253 KKLTLTTAIIAAIVGIFALNHGGASKTVSSVEKIKESGQLVVATNIGYAPYEFYDLTSGH 312

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D+ F + L+  +     K+    +N       + S   DI       T  RE  
Sbjct: 313 KKAVGVDIAFAQQLADKL---QVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKEREK- 368

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F           ++ K+     +S+  L+  +I VQ  TT    + D  K      
Sbjct: 369 -SVDFTENYVKQTNKVVVRKEVASQYTSIKSLASTTIAVQKSTTQADVVEDDIK----PQ 423

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +    + ++       + DA   D +       +ND    +  +    +    A A+ 
Sbjct: 424 QIVALSSLPDVFLNLLQGKVDAVVADDTVADQYIASNDN-LTYADIELPGTTE-TAMALT 481

Query: 232 QGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
           +G++     V            +    AE   + QKN  +
Sbjct: 482 KGNSSLKEYVDQLIEQDKKDGTFDKWMAEYSELAQKNTTE 521


>gi|288905048|ref|YP_003430270.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus UCN34]
 gi|288731774|emb|CBI13337.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Streptococcus gallolyticus UCN34]
          Length = 517

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 88/280 (31%), Gaps = 29/280 (10%)

Query: 2   YKDFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVK---AN 53
            K    + +   I+   +      S   S +  IK+ G L    N G   +        +
Sbjct: 248 KKLTLTTAIIAAIVGIFALNHGGASKTVSSVEKIKESGQLVVATNIGYAPYEFYDLTSGH 307

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D+ F + L+  +     K+    +N       + S   DI       T  RE  
Sbjct: 308 KKAVGVDIAFAQQLADKL---QVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKEREK- 363

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F           ++ K+     +S+  L+  +I VQ  TT    + D  K      
Sbjct: 364 -SVDFTENYVKQTNKVVVRKEVASQYTSIKSLASTTIAVQKSTTQADVVEDDIK----PQ 418

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +    + ++       + DA   D +       +ND    +  +    +    A A+ 
Sbjct: 419 QIVALSSLPDVFLNLLQGKVDAVVADDTVADQYIASNDN-LTYADIELPGTTE-TAMALT 476

Query: 232 QGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
           +G++     V            +    AE   + QKN  +
Sbjct: 477 KGNSSLKEYVDQLIEQDKKDGTFDKWMAEYSELAQKNTTE 516


>gi|257790012|ref|YP_003180618.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
 gi|257473909|gb|ACV54229.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
          Length = 267

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 16/237 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
                TS +     L      G L    +     F  +  +   +GF VD    L+  + 
Sbjct: 31  TTTSSTSGNDAGYTL---VNDGKLTVAASLDFPPFENLNGD-KPEGFAVDLMTLLAEEMG 86

Query: 73  DDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
            +   +             +Q+  + D+   +   T  R     + F        Q   +
Sbjct: 87  LECEYLP--STKFDTIVPLIQTGGKADVGVSSFTITDKR--LQQVDFTDPYCNVNQSITV 142

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
               GI+ V+QL G  I  Q+GTT     A+  K          ++ +  + AA  + + 
Sbjct: 143 RSDSGITDVAQLEGKKIGAQSGTTGYEWAAENIK----DAEVTGYDEMTAVFAALDSGQI 198

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           DA + D+        +        ++ +I +    A  + + + E    ++    A+
Sbjct: 199 DAVSVDLPVANYYVRSYSDCQ---VIKEIPTGEQYAVTVSKENPELTKALNKALQAV 252


>gi|126175589|ref|YP_001051738.1| extracellular solute-binding protein [Shewanella baltica OS155]
 gi|125998794|gb|ABN62869.1| extracellular solute-binding protein, family 3 [Shewanella baltica
           OS155]
          Length = 244

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 16/224 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD+D  + ++         ++   +     
Sbjct: 23  KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
            +AL S +ID ++     T  R+ ++  +  P         +      I ++  + G   
Sbjct: 80  IVALNSGKIDFIASGMTITAERQANVNFS-EPYYEATQVVLVNKDNDSIHTLEDIKGKHF 138

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GTT +        +     +   F    E     +  + D    D          N
Sbjct: 139 AVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNSKVDLVLFDSEPAANYLAKN 192

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               E  ++           A+ +   E    ++ T  A + A+
Sbjct: 193 P---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232


>gi|300721601|ref|YP_003710876.1| cysteine ABC transporter periplasmic-binding protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628093|emb|CBJ88644.1| cysteine transport protein (ABC superfamily, peri_bind)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 262

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 66/233 (28%), Gaps = 13/233 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            ++          IK  G  K G       F     N    GFDVD  + ++  +     
Sbjct: 22  VSAPGYAGKDFDAIKASGVFKIGTEGTYPPFTYHDTNNKLTGFDVDIAQEIAKRLNVKSE 81

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
              ++ +        L +K+ D +      T  R       F           I      
Sbjct: 82  ---FMEVKWDGLIAGLDAKRFDAVINQVGITPERAA--KYNFSIPYTTSQVVLITRNNND 136

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I + + + G     Q+ T+    LA  + A+      +  +   +        R DA  
Sbjct: 137 VIKTFADIKGKRSA-QSLTSNYGQLATSYGAN-----LVSTDGFNQAIDLVVTGRADATL 190

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            D  +    K         ++     +    A  + +GD E    ++     M
Sbjct: 191 NDRLSFLDFKKQRPDAPVKIVAQQADASKS-AVLVRKGDAELVKAINKALQEM 242


>gi|227549084|ref|ZP_03979133.1| glutamate-binding protein GluB [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078866|gb|EEI16829.1| glutamate-binding protein GluB [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 290

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 75/230 (32%), Gaps = 15/230 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQYLP 82
           L  I + G +  G      G    +A+G   G DVD       +++        +I +  
Sbjct: 36  LAQI-ESGNVTLGTKYDQPGLGLREADGSMTGLDVDVLTYVVNSIAEDKGWAEPEITWRE 94

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141
             + +R   +Q+ ++  +         R     ++F        QG ++   +  I+ + 
Sbjct: 95  TPSAQRETLIQNGEVAAIGATYSINASRAE--AVSFAGPYLLTHQGLLVRADEKDITGLE 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  +C   G+T    + D             ++       A R    DA T D S L
Sbjct: 153 GLDGRILCSVTGSTPAQKVKDALP----GVQLQEYDTYSSCVEALRNGNVDAMTTDASIL 208

Query: 202 YALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 +      V L       +       + + DTE  + V+    AM
Sbjct: 209 GGYSAQSPGDFAIVELEKDGQPFTNEHYGIGVTKDDTEAVDAVNKALEAM 258


>gi|182436943|ref|YP_001824662.1| putative serine/threonine protein kinase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178465459|dbj|BAG19979.1| putative serine/threonine protein kinase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 699

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 76/239 (31%), Gaps = 7/239 (2%)

Query: 20  FSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77
            +  +      K     L+ G+     G ++       ++G+DVD   A++ ++     +
Sbjct: 429 GAAGSGSQERWKDTHDTLRIGVKDDQPGLSKFDKKTRTYRGYDVDLAYAIAESMGYGKGE 488

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHK 133
           + +  +    R  AL++KQ+D++  +   T  R+        + F    Y   + F++ +
Sbjct: 489 VSFTTVATDYRSTALKTKQVDLVIASYSITDDRKTASPGGYSVDFAGPYYDASRSFLVRE 548

Query: 134 KKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K    +++  S    + V+  T  E T                    ++        + D
Sbjct: 549 KSSKYTINDSSDLVDLRVEVCTARESTYETELPKRGFTMAKSQPNTYQDCLDKLLDPKSD 608

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            Y      +         P +   L  I        A+    T     V      ++  
Sbjct: 609 VYAVASDDIILAGYVKANPGKVRQLEPINGAEGYGVAMRPKSTLLKGEVCSALRTILAG 667


>gi|326804127|ref|YP_004321945.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650473|gb|AEA00656.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 495

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 88/241 (36%), Gaps = 16/241 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSK 77
           + +  +L +IK RG L+ G  +G   F             G DV   + ++  +      
Sbjct: 38  AQDDQLLQEIKDRGVLRFGTASGYAPFEFTVLENGQNRLVGTDVFLAQQIADDLGVK--- 94

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           ++ + +       A+++  +D++     +T  R+    + F  +   D Q F++ K+   
Sbjct: 95  LEIVDMEFGSLIPAMETGSVDMIISGMSYTEERDK--KVDFSDVYQSDQQYFVIRKQDQD 152

Query: 137 -ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            I  VS    G  I V   T  +  + +   +       +   +  +  AA  A++ DA 
Sbjct: 153 KIKDVSYFDQGGKIGVSDNTLQDTLVTERVTSA----EKVAMRKSADAVAALMANQVDAV 208

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D S   A    +          D+ S    + AI      +   ++ T  A V + ++
Sbjct: 209 LLDESVAKAFAAEHGELLAIPSGLDVSSDG-KSVAIPNNQPTFLAEINKTVNACVESGQM 267

Query: 255 G 255
            
Sbjct: 268 D 268


>gi|260575384|ref|ZP_05843383.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
 gi|259022304|gb|EEW25601.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
          Length = 255

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 67/209 (32%), Gaps = 23/209 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M K        L+     +                +K GI       FA   A G+W G+
Sbjct: 1   MKKTILTVAALLLGTAAVAAP--------------IKVGIAAEPYPPFASPDAAGNWVGW 46

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD   A+  A      +    P+       +L   QID +  +   T  R     + F 
Sbjct: 47  EVDMIGAVCKAA---ELECVVTPVAWDGIIPSLTGGQIDAIMASMSITEER--MQTIDFS 101

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      +  K   I      L G  I VQ  T  E  +  +F A        +++ 
Sbjct: 102 DKYYNTPTVIVAAKGAAITPDAEGLKGKIIGVQVSTVHEAYVQAHFAA--TAAEIKIYQT 159

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLT 207
            +E D    A R DA   D  AL A   T
Sbjct: 160 QDEADQDLAAGRIDATQADSIALDAFLAT 188


>gi|171320897|ref|ZP_02909894.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171093840|gb|EDT38974.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 265

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 81/251 (32%), Gaps = 19/251 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61
           K    S+LCL  +   + +   S        G L+ G+       F      G W GF+ 
Sbjct: 2   KRVVRSLLCLFSIVVAALAPLGSAHA---SSGVLRFGVAAEPYPPFLMKSPTGQWSGFEA 58

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RAL   +    +K +   +       AL S +ID++  +   T  R+  +   F   
Sbjct: 59  DLIRALCDQM---KAKCEIKEVAWDGIIPALLSDKIDVIFNSMSITPERQKVIA--FSRP 113

Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y     F+  K   ++     L G  I VQ  T     +     A+       ++   +
Sbjct: 114 YYETPGTFVGAKNTKLTLTPDGLKGKVIGVQGSTANAEFIK---MAYGKSATVRLYNTQD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGD 234
           + +A   A R D    D   +     + D  +  +     +   P      +   + + D
Sbjct: 171 DCNADLVAGRIDTMYLDQLGILDFLKSKDGSTFELKGSGSVKMDPAIFGYGVGAGMRKAD 230

Query: 235 TEWYNIVSWTH 245
                 +    
Sbjct: 231 APLKQQMDQAL 241


>gi|146312500|ref|YP_001177574.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Enterobacter sp. 638]
 gi|145319376|gb|ABP61523.1| L-histidine-binding protein [Enterobacter sp. 638]
          Length = 260

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 20/245 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    + G+  GFD+D    L   I     +  Y+         +L++
Sbjct: 27  KVRIGTDPTYAPFESKNSKGELVGFDIDLANELCKRI---KVQCTYIENPLDALIPSLKA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID++  +   T  R     +AF    Y      ++     I  ++  L G  + V  G
Sbjct: 84  KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVANASDIQPTLESLKGKRVGVLQG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT E    +++    +    + ++  E I A   A R DA   D  A     L      +
Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKTSVGKD 199

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +      I    L        + + D E    ++   +A + A+          +++K  
Sbjct: 200 YKFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252

Query: 269 TNPDV 273
            + DV
Sbjct: 253 FDFDV 257


>gi|315918404|ref|ZP_07914644.1| amino acid-binding protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313692279|gb|EFS29114.1| amino acid-binding protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 241

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L  G N     F  +   G   GFD++   AL+  +  D   ++   +       ALQ
Sbjct: 26  KTLYVGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
            K++D++      T  R+    ++F    +   Q  I  K K I    +LSG  + V  G
Sbjct: 82  MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKKVGVMLG 139

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            T +  ++D   A         F+       A    + DA   D         +     +
Sbjct: 140 FTGDAVVSDIKGAK-----VQRFDTTYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 191

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             I      +   A A+ + D    + ++   
Sbjct: 192 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 223


>gi|301301313|ref|ZP_07207463.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851087|gb|EFK78821.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 485

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 13/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +   ++F + F    S+  D K         +     F     +  + G D
Sbjct: 1   MKKFITFLSIISSLIFLSFFVKPQSVHADEK---TYTIATDVTFPPFEYANDSNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++     +  K+   P+       ++ + Q+D +      T  R+      F  
Sbjct: 58  IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    +     I S+ QL G  + ++ GT+           +  K   + F+  +
Sbjct: 113 PYYSSGIVMAVKPDSSIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +    +     A   D      L+          I+    +      A+ +G  +
Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGNFGFAVKKGTHQ 223


>gi|242238190|ref|YP_002986371.1| prephenate dehydratase [Dickeya dadantii Ech703]
 gi|242130247|gb|ACS84549.1| Prephenate dehydratase [Dickeya dadantii Ech703]
          Length = 255

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L    L        AS L  ++++G LK         +   +A+GD++G D
Sbjct: 1   MRKRFLFILL----LGGAGSVNAASHLDQVQEQGVLKVCTTGDYKPYTSQRADGDYEGID 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   R+L+ ++  +   ++++  + K      QS + DI       TL R+     +   
Sbjct: 57  ISMARSLAKSLGVN---VEWVKTSWKTLMPDFQSGKCDIAMGGISVTLERQKKAFFSSML 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178
                        K    +V+QL+  S+ V      T E  +  Y    +     ++   
Sbjct: 114 DVDGKIPLVRCEDKDKYRTVAQLNQPSVRVIEPAGGTNEAFVHAYLPNAH-----LMLHD 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I       + D    D S     +    +         +      A  + + D  W 
Sbjct: 169 NVTIFQQLVDKQADVMITDASEALFQQKRYPQLCAVNPSSPLQYGE-KAYMLPRDDMNWK 227

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +   +  E  
Sbjct: 228 LYVDQWLHLSKSNGEYR 244


>gi|170289920|ref|YP_001736736.1| extracellular solute-binding protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174000|gb|ACB07053.1| extracellular solute-binding protein family 3 [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 289

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 71/222 (31%), Gaps = 8/222 (3%)

Query: 33  RGFLKC--GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            G +    G +     F  ++ NG   GFDVD    ++         I Y P +      
Sbjct: 60  SGEVTIIYGFDANYPPFTVMQPNGTPVGFDVDLMNLIAEKYGWK---IVYKPWDWSTIVT 116

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           AL++  ID+++    +   R  S  + F    Y      ++  +   S    L+      
Sbjct: 117 ALENGDIDVIASGMTFNAAR--SQKIWFSVPYYSYVHQLVVRSEDKRSFDEILNSNEYIA 174

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               +T    AD       K+  +  +       A    R  A   D + L      +  
Sbjct: 175 VQLGSTSDEWADRLIKAGYKFKKLGLDSYVSALEALLDGRASAVITDSAFLGPYLKKDPD 234

Query: 211 PSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            +    +L  I + +  A A    D    + ++     ++ +
Sbjct: 235 LAAKVKVLGSIGAPNVYAIATRPQDKWLRDKINEALEELMNS 276


>gi|118590987|ref|ZP_01548387.1| putative periplasmic binding abc transporter protein [Stappia
           aggregata IAM 12614]
 gi|118436509|gb|EAV43150.1| putative periplasmic binding abc transporter protein [Stappia
           aggregata IAM 12614]
          Length = 259

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 9/219 (4%)

Query: 35  FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +K GI       F    ++G W G++++F  A+ +    D       P+       AL 
Sbjct: 26  EVKVGIAAEPYPPFTSPDSSGKWVGWEIEFMDAICAEAKLD---CVVTPVAWDGIIPALT 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           S +ID++  +   T  R  +  + F    Y    G I  K      +   LSG  I VQ 
Sbjct: 83  SGKIDMIIGSMSITEERLKT--IDFSDKYYNTPTGIIGAKGDDFEATPEGLSGKIIGVQV 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T        +F   ++      ++  +E +    A R DA   D  AL A   +     
Sbjct: 141 STIHADYAEKHFG--DVAAEIKQYQTQDEANQDLAAGRVDAVQADAIALDAFLKSEGGDC 198

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             +       ++ L   +  G  +    +     A + A
Sbjct: 199 CELKGNVEDDQAILGAGVGVGLRKDDTELKDKLNAAIKA 237


>gi|317054119|ref|YP_004118144.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316952114|gb|ADU71588.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 254

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 71/230 (30%), Gaps = 17/230 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +    +     F  + ANG   G+DVD   A+ +A   D + I             L 
Sbjct: 24  GTITIATDATFPPFESIDANGKLVGYDVDLMHAICTAAALDCNVIS---APWDGMIPGLM 80

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152
           + + D L      T  R   +   F  I       F+  K     +S   L G  I VQ 
Sbjct: 81  NNKYDALISQLTVTDARRRVMA--FSDIYDHPVFRFVAKKGTLTDTSPEALKGKVIAVQT 138

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  +  +  ++           ++          A R D +    + +    L  D   
Sbjct: 139 GTPMDTFVTKHYP----GSTIKRYDGGSAPYLDLTAGRADIFMSYEAQIIYSFLKKDDGK 194

Query: 213 EHVILPD-------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++ ++               +  A+ + +T     ++     +    EL 
Sbjct: 195 DYQLVGPRLTGKDAPEFGEGVGIAMNKKNTALVEKINQGLAKVRADGELD 244


>gi|255654800|ref|ZP_05400209.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-23m63]
 gi|296449543|ref|ZP_06891320.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Clostridium difficile NAP08]
 gi|296878134|ref|ZP_06902149.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Clostridium difficile NAP07]
 gi|296261607|gb|EFH08425.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Clostridium difficile NAP08]
 gi|296430887|gb|EFH16719.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Clostridium difficile NAP07]
          Length = 271

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 68/225 (30%), Gaps = 14/225 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFD 73
             S     + L  IK  G L  G +     F     V      KGFD+      +  +  
Sbjct: 22  GCSGGGEKTKLEQIKDSGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIMLAEEFAKELGV 81

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132
               ++   ++      AL + Q+DI+      T  RE    + F  + Y      I+  
Sbjct: 82  K---VEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREK--SVDFSELYYLSRNAVIVKD 136

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                + +   L    + VQAG+  E  + +  K           + + ++    +    
Sbjct: 137 ADIDKVKTEDDLKKLRVGVQAGSIQEEYVVNTLK----MTTTKSLKAIPDLITELKNGNI 192

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           DA   + +         D                +A AI + D  
Sbjct: 193 DAVVTNEAVSLINVKKYDGIKMANTEVGKNVTEGMAAAIKKADNN 237


>gi|254362204|ref|ZP_04978319.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica PHL213]
 gi|153093776|gb|EDN74715.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica PHL213]
          Length = 257

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 13/211 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    SI  L +    S     S+L  I  +G +  G       +    A+G   G+D
Sbjct: 1   MLKKL--SIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAPYTYHDASGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  RA++  +     K+++           L+ ++ D+++     T   E         
Sbjct: 59  VEVTRAVAEKL---DVKVEFKETQWDAMLAGLKGERFDLVANQVALT-SPERRATFDKSE 114

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   ++   +  I + + + G    V+   T      +  + +      +  + +
Sbjct: 115 SYSWDGAALLVREDETKIKTPADVKG----VKTAQTLSSNYGEIARENGAD--IVPIDGM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +     +  R DA      +L      N  
Sbjct: 169 AQGLLLIQQKRADATFNSHLSLLDYLKKNPN 199


>gi|119961444|ref|YP_946819.1| amino acid ABC transporter [Arthrobacter aurescens TC1]
 gi|119948303|gb|ABM07214.1| putative amino acid ABC transporter [Arthrobacter aurescens TC1]
          Length = 271

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 67/232 (28%), Gaps = 14/232 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDD 74
              + S   + L D+K +G L          F+      G+  GFDV+  +A++  +   
Sbjct: 29  SAPAQSGGDTSLSDVKSKGELVIATEGTYRPFSFHADGAGELTGFDVEVAQAVAGKLGVK 88

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
                +        F  L+SK+ D ++        R+      F           +    
Sbjct: 89  A---TFQETQFDGIFAGLESKRFDTIANQISINDERKA--KYDFSTPYTISTGVVVTKSD 143

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+S + L G +   Q+ T+    +A    A+         E   +     +  R DA
Sbjct: 144 NSSINSFADLKGKTTA-QSLTSNFYKMAVEAGAN-----VQAVEGWAQSATLVQQGRVDA 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D                 V           A    +G TE    V    
Sbjct: 198 TVNDKLTYLDYAKNTPDSGLKVAAEAPEKTES-AMVFRKGSTELTAAVDKAL 248


>gi|295680982|ref|YP_003609556.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295440877|gb|ADG20045.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 257

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F     +G   GFDVD    +   +    +K  ++  +      
Sbjct: 20  KDWSTVRFGVDASYAPFESKATDGKLVGFDVDLGTEICRRL---NAKCVWVEQDFDSMIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI   +  L G ++ 
Sbjct: 77  ALKAKKFDGVLSSMSMTPKRAEQIA--FSSKLFNTPTRLVAKKGSGIMPTADSLKGKTVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++A       + ++  + +    ++ R DA   D        L   
Sbjct: 135 VEQGTIQETYAKTYWEAKG--VKIVPYQNQDAVYTDLQSGRLDAALQDAVQADQGFLKTP 192

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   I    +        + + D +    V      M+
Sbjct: 193 RGASFDFVGKNIDDPQILGNGAGIGMRKEDEDLKIKVDKAIADMI 237


>gi|257895699|ref|ZP_05675352.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257832264|gb|EEV58685.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 535

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%)

Query: 1   MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44
           M +      F   +  L+ L F          T+ S+ +  +  I+ K+       ++  
Sbjct: 36  MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F    ANG+++G DV    +++         I+           AL+S Q D +    
Sbjct: 96  APFEFQNANGEYEGIDVQLMESIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T  R+      F    +  G    + K    I S   L G ++  + GT +   L+D+
Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
              +        F+  +++    +    DA   D   +        +  E     +  S 
Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 265

Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
              A A+ +  + E  N+ +     +    E  
Sbjct: 266 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298


>gi|269120481|ref|YP_003308658.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
 gi|268614359|gb|ACZ08727.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
          Length = 272

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 22/249 (8%)

Query: 1   MYKDFF--VSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M       V+IL L +L  +  S                 D K+      G +     F 
Sbjct: 1   MKGKILKLVTILSLFMLMLSCGSDKKEEAKQEGAATEAKADNKEVKKYVIGSDVAFAPFE 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               +G ++G D+D    ++     +  ++++  ++      A+QS Q+D          
Sbjct: 61  FK-KDGKYEGIDIDIVNEIAK---IEGFEVEWKHMDFSGIIGAVQSGQLDGAIAGMTIND 116

Query: 109 LREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
            R  +  + F    Y     G +      I+S        + V+ GTT         + +
Sbjct: 117 ERRKT--VDFSDPYYDTGIVGIVKADNTDINSPDDFKDKRLAVKKGTTGAEYAESVKEKY 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           N K     FE    +  +    + D    D   +         P +  I  + ++ +   
Sbjct: 175 NTKITV--FEDTSTMIQSVINGQADVAFDDFPVIAYAITQ-QDPVQLRIATERLNTAQFG 231

Query: 228 PAIIQGDTE 236
            A+ +G  +
Sbjct: 232 FAVKKGANQ 240


>gi|291298121|ref|YP_003509399.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
 gi|290567341|gb|ADD40306.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
          Length = 272

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 78/247 (31%), Gaps = 19/247 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           +   V ++  + +   +    A          +  I     L    N   V F   + NG
Sbjct: 8   RLLAVGLVVAVGMTVAACGGGAEKTKTPGGYTVELI-DAKKLTVCTNIPYVPFQF-EKNG 65

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFDVD    L++        +  +  +  E   AL   + D+ +     T  RE   
Sbjct: 66  KTVGFDVDMVD-LAADELGVKQDVIDVKWDNIENGSALSGGKCDLAAAAMTITPEREK-- 122

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            L F    + +   F+  K K   SV  +    + VQA TT+         A   K  P 
Sbjct: 123 NLTFSEPYFDEVIAFVAPKGKAPKSVEDVGDRKLGVQASTTSLEY------AKKHKLEPQ 176

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            FE   +  A   + + +    D   +          +++ +   I + S       +  
Sbjct: 177 EFEDSAKQRAGLESGKVEVVLQDYPVITEWMKDEKFAAKYEVGQIIETGSQYGFGFKKSA 236

Query: 235 TEWYNIV 241
            +    V
Sbjct: 237 DKTLVKV 243


>gi|254236426|ref|ZP_04929749.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa
           C3719]
 gi|126168357|gb|EAZ53868.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa
           C3719]
          Length = 322

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 77/261 (29%), Gaps = 18/261 (6%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
            CL +L   S     S L  I + G L+         F+     G + GFDVD  + L+ 
Sbjct: 67  ACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAE 126

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           ++      +     +           + DI        L R+      F      DG+  
Sbjct: 127 SLGAKLVVVP---TSWPNLMRDFADDRFDIAMSGISINLERQR--QAYFSIPYLRDGKTP 181

Query: 130 IM----HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           I       +          G +  V  G T E     + +A+  K   +V      I   
Sbjct: 182 ITLCSEEARFQTLEQIDQPGVTAIVNPGGTNE----KFARANLKKARILVHPDNVTIFQQ 237

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D      L+         V        +  A  + + +  +   V    
Sbjct: 238 IVDGKADLMMTDA-IEARLQSRLHPELCAVHPQQPFDFAEKAYLLPRDE-AFKRYVDQWL 295

Query: 246 YAMVTAEELGITQKNINQVSK 266
           +    AE+ G+ ++ +    +
Sbjct: 296 H---IAEQSGLLRQRMEHWLE 313


>gi|258540995|ref|YP_003175494.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|257152671|emb|CAR91643.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 482

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 108/331 (32%), Gaps = 39/331 (11%)

Query: 2   YKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
            K + V+I+ LI +            +  +  L  I+KRG+L  G++           + 
Sbjct: 4   IKHWAVAIIALIAMIVGFTSYQPVPTAAASKDLAAIQKRGYLVVGLSADYAPLEFHATIN 63

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G D+   + ++  +      +Q   +N      AL++ +ID++      T  RE
Sbjct: 64  GADTIVGADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPERE 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F     ++ Q  ++ K       S++  SG  +  Q  TT E            
Sbjct: 121 K--EVNFSTPYLYETQVMVIRKADKAKYKSIADFSGKRVGAQKQTTQEQLAKTQLP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                  ++  ++ A    ++ DA     +   +        +          K+P A A
Sbjct: 175 GAKVTSLDKANDVVAQISYNKLDAGVLASTIADSYVARTPSLTVIDP-HFATDKAPTAIA 233

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGI 279
           + +        V+ T   +  A+     Q       +D               +   +  
Sbjct: 234 VSKQSPALLKQVNKTISKVKGAKYKSYLQAAYKLQDQDQGFWAKYGNYFIRGAIYTLVFA 293

Query: 280 DKSSNIGEALG-------LTKDWTYRIIRHM 303
             +   G  +G       L+++W  +++ ++
Sbjct: 294 VLTVLFGTIIGTLLALMKLSRNWLAKVVANI 324


>gi|116496232|ref|YP_807966.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei ATCC 334]
 gi|116106382|gb|ABJ71524.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
          Length = 482

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 36/324 (11%)

Query: 6   FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58
           F++++ +++ F        +  +  L  I+KRG+L  G++           +       G
Sbjct: 11  FIALVAILVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   + ++  +      +Q   +N      AL++ +ID++      T  RE    + F
Sbjct: 71  ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125

Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                ++ Q  ++ K       S++  SG  +  Q  TT E                   
Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  ++ A    ++ D      +   +                   K+P A A+ + ++ 
Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGIDKSSNIG 286
               V+ T   +  A+     Q       ++ +             +   +    +   G
Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFG 300

Query: 287 EALG-------LTKDWTYRIIRHM 303
             +G       L+  W  + I ++
Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324


>gi|83717417|ref|YP_440319.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
 gi|167578947|ref|ZP_02371821.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis TXDOH]
 gi|167617047|ref|ZP_02385678.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis Bt4]
 gi|83651242|gb|ABC35306.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
          Length = 262

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 13/223 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K    ++ G++     F     +G   GFDVD    +   +    +K  ++  +    
Sbjct: 23  QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147
             AL++++ D +  +   T  RE  +   F    +      +  K   +  +   L G +
Sbjct: 80  IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V+ GT  E     ++       +   ++  +++ A   A R DA   D        L 
Sbjct: 138 VGVEQGTIQETYAKVHWAPKG--VNIQPYQNQDQVYADLIAGRLDAALQDAVQADIGFLK 195

Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
             R  +       ++            + + DT+    +    
Sbjct: 196 TPRGKDFAFAGSDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 238


>gi|330469204|ref|YP_004406947.1| extracellular solute-binding protein family 3 [Verrucosispora maris
           AB-18-032]
 gi|328812175|gb|AEB46347.1| extracellular solute-binding protein family 3 [Verrucosispora maris
           AB-18-032]
          Length = 303

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 72/234 (30%), Gaps = 14/234 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +   IK  G +K G +        +  +G    GFDV+   A++  +        Y 
Sbjct: 51  AAKVPDAIKADGVIKVGTDATYAPAEFLDTDGSTVIGFDVELFNAVAQKLGLKAE---YE 107

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                     +QS + +I   +      R  S+ +      +  G  +            
Sbjct: 108 SAPFDAILPGVQSGKYEIGVSSFTINADRLQSVNM---VSYFSAGTQWATKAGNPAQVDP 164

Query: 142 QL-SGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
               G  I VQ GT     +         A   +     ++   +  AA  + + DA   
Sbjct: 165 DNACGKKIAVQVGTVQLDDITARSKACTDAGKPEITIDQYQAQSDATAAVVSGKNDAMLA 224

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           D               +  +L DI   +P   A+ +  T +  ++     A++ 
Sbjct: 225 DSP--VGAYAVKQSNGQLEVLGDIYESAPYGYAVPKDQTAFAEVLKEAVQAVIA 276


>gi|238749890|ref|ZP_04611394.1| Glutamine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
 gi|238711819|gb|EEQ04033.1| Glutamine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
          Length = 247

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   + +  + GFD+D   A++  +     K    P++      A
Sbjct: 23  AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKL---DLKYTLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150
           LQ+K +D+       T  R+    + F    Y  G   ++      I   + L+G  + V
Sbjct: 79  LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNDIKGEADLAGKVLAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +     DY KA+        F  ++         R DA   D   +     T   
Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +   + D I       A  QG ++    V+    ++  
Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLREKVNAALKSLKE 230


>gi|50121592|ref|YP_050759.1| arginine-binding periplasmic protein 1 [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612118|emb|CAG75568.1| arginine-binding periplasmic protein 1 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 243

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     I+  +     + +  A           ++         F  V AN   +GFD
Sbjct: 1   MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +   +           L+ ++ + +    D T  R     ++F  
Sbjct: 48  IDLANALCKEM---QANCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFSQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K   ++ V+ L G  + +Q G+T +  L +           + ++  +
Sbjct: 103 PYYDNAALFIAQKG-KVADVAALKGKRVGMQNGSTHQKYLLEKHPE----ITAVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 ++ R DA  GD + +          +   +  ++  K      L  A+ Q + E
Sbjct: 158 NAVLDLKSGRLDAVFGDTAVVNEWLKQ--NDTLATVGENVTDKDYFGIGLGIAVRQNNDE 215

Query: 237 WYNIVSWTH 245
                +   
Sbjct: 216 LLKKFNDAL 224


>gi|320535310|ref|ZP_08035430.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
 gi|320147842|gb|EFW39338.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
          Length = 273

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 80/268 (29%), Gaps = 16/268 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M     + I+   +LF        S         L  +   G L  G++           
Sbjct: 1   MKSKILLCIIAFQLLFLFFSCEKESEELVSDDISLSKVLASGKLIMGVDDDSPPMCFKYG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G+DVD  RA+   +      ++  P+    +   L   ++D +      T  RE 
Sbjct: 61  ESQIVGYDVDLARAVCRILG---ITLEIRPIPWSLKNTLLDIGEVDCIWSALSVTPERE- 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F        Q  I+  K     +++L    +  QA ++ E  LA           
Sbjct: 117 -DEFCFSGAYARTAQVIIVSNKSTYRKLNELKKKRMAFQASSSAESALAANPDFLLSLKD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  E   ++  A      D+   D+   +        P    IL   ++    A    +
Sbjct: 176 VIPMETTTDVFEAVINGSVDSGLVDLVTAHDAIRRLGMP--LKILDMPLNSEVYAVGFKK 233

Query: 233 GDTEWYNIVSWTHYAMVT-AEELGITQK 259
           G+      V      +    E   I+QK
Sbjct: 234 GNIALMEAVQGALEKLEERGEAYNISQK 261


>gi|199597667|ref|ZP_03211095.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|229551247|ref|ZP_04439972.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258509811|ref|YP_003172562.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|199591474|gb|EDY99552.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|229315410|gb|EEN81383.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257149738|emb|CAR88711.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259651074|dbj|BAI43236.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 482

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 108/331 (32%), Gaps = 39/331 (11%)

Query: 2   YKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51
            K + V+I+ LI +            +  +  L  I+KRG+L  G++           + 
Sbjct: 4   IKHWAVAIIALIAMIVGFTSYQPVPTAAASKDLAAIQKRGYLVVGLSADYAPLEFHATIN 63

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G D+   + ++  +      +Q   +N      AL++ +ID++      T  RE
Sbjct: 64  GADTIVGADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPERE 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F     ++ Q  ++ K       S++  SG  +  Q  TT E            
Sbjct: 121 K--EVNFSTPYLYETQVMVIRKADKAKYKSIADFSGKRVGAQKQTTQEQLAKTQLP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                  ++  ++ A    ++ DA     +   +        +          K+P A A
Sbjct: 175 GAKVTSLDKANDVVAQISYNKLDAGVLASTIADSYVARTPSLTVIDP-HFATDKAPTAIA 233

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGI 279
           + +        V+ T   +  A+     Q       +D               +   +  
Sbjct: 234 VSKQSPALLKQVNKTISKVKGAKYKSYLQAAYKLQDQDQGFWAKYGNYFIRGAIYTLVFA 293

Query: 280 DKSSNIGEALG-------LTKDWTYRIIRHM 303
             +   G  +G       L+++W  +++ ++
Sbjct: 294 VLTVLFGTIIGTLLALMKLSRNWLAKVVANI 324


>gi|167586326|ref|ZP_02378714.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 261

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +    L+ GI      F      G  +GFDVD   A+ + +     K  ++         
Sbjct: 24  QSANTLRFGIEAAYPPFESKTPAGQLQGFDVDVGNAVCAKL---KMKCVWVENAFDGLIP 80

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
           ALQ+++ D ++   + T  R     + F P  Y      +  +    +   + L G  + 
Sbjct: 81  ALQARKFDAINSAMNITAKR--RQSIDFTPAIYVVPIVMVAKRGSPLLPDAASLRGKRVG 138

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  G++ E  L  ++         + +   ++I A   A R DA   +        L   
Sbjct: 139 VLQGSSQEDFLKAHWA--GAGVSVVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKP 196

Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
              ++ I+ + +             + +GD      +     A+
Sbjct: 197 AGRDYQIVGEPLKDPATLGEGTGFGMRKGDKALQAKLVGALDAL 240


>gi|158319238|ref|YP_001511745.1| extracellular solute-binding protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158139437|gb|ABW17749.1| extracellular solute-binding protein family 3 [Alkaliphilus
           oremlandii OhILAs]
          Length = 281

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 91/269 (33%), Gaps = 34/269 (12%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNA----------------SILGDIKKRGFLKCGIN 41
           M K    F  S++   IL  T+                     S +  IKK G L  G +
Sbjct: 1   MKKFSKLFIASLIIGGILSLTACGNGGGATTGGETETGGKEVVSKIEQIKKSGKLILGTS 60

Query: 42  TGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
                +     +       GFD++  + ++  +  +   ++   ++     LAL + ++D
Sbjct: 61  ADYPPYEFHKEIDGKDTIVGFDIEIAKEIAKDLGVE---LEIKDMDFDGLLLALNADKVD 117

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTT 156
           ++      T   E    + F  I Y    G +++   K    +V  L+G  +  Q G   
Sbjct: 118 MVMAGM--TPDPERIKVVDFSKIYYEAVHGVVINVANKDTFKTVEDLAGKKVGAQKGAVQ 175

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E    +               ++ ++    + ++ DA   +     +    N      + 
Sbjct: 176 EDIAVNEIP----DIELKSLAKIPDLVLEVKHNKIDALVMEKPVANSYVDHNSD-LALMD 230

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           L     +   A AI +G+T+    ++ T 
Sbjct: 231 LTFDDGEGGSAVAIKKGNTDLMEEINKTL 259


>gi|78063316|ref|YP_373224.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77971201|gb|ABB12580.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 256

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 73/227 (32%), Gaps = 15/227 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    L+ G++     F  +  +G   GFD+D   A+   +     +  ++         
Sbjct: 20  KDPAVLRLGVDPSYAPFESLAPDGKLVGFDIDLGNAICERM---KVRCVWVENAFDGMIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++++ D +  +   T  R   +   F           +  +   +  +   L G S+ 
Sbjct: 77  ALKARKFDGVLSSMSVTEKRLAQIA--FTDKINNVPPRLVARRGSNLQPTPESLQGKSVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+T E     Y++          ++  + +     + R DA            L   
Sbjct: 135 VEQGSTQETYARTYWEPKG--VIVRTYQTQDLVYQDLLSGRLDASLQSSVQADLGFLKTA 192

Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAMVT 250
           + +        +   P       A  + + D      ++    +++ 
Sbjct: 193 KGANFEFAGPPLH-DPKTLGVGSAIGVRKDDDALRTQINQALASLIQ 238


>gi|319790879|ref|YP_004152519.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315593342|gb|ADU34408.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 248

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 75/211 (35%), Gaps = 14/211 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +        V  NG   GFDV+   A+   +      I+++ ++ K     L SK
Sbjct: 29  LRVATDATFPPMEFV-ENGKRTGFDVELVEAVGKTLGRK---IEWIDIDFKGLVPGLISK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
           + D+       T  R+    + F    Y  G   ++      I + + ++G  + VQ GT
Sbjct: 85  RFDMAVSAIYITDERKKV--VDFTVPYYAGGLVVMVKDGNTAIKAPADINGKKVSVQVGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +      + K    +   +  E+ +E+       R DA      A Y    T       
Sbjct: 143 KSVA----FTKEKYPQVQLMEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPG---L 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +LP+ I+      AI +   E    V+   
Sbjct: 196 KVLPEQITTEEYGMAIRKDTPELTKAVNGAI 226


>gi|295700588|ref|YP_003608481.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295439801|gb|ADG18970.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 255

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 85/252 (33%), Gaps = 20/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +   +     +F+ +A+          L+ GI+           +G  KGFD
Sbjct: 1   MKTPLMI-LCAALAFSSGAFAADANT---------LRLGIDPTYPPMDSKAPDGSLKGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +   I    +  Q++ L       ALQ+++ID +  +   T  RE    + F  
Sbjct: 51  VDLGNEICRRI---HAHCQWVELEFSGMIPALQARKIDAVLSSMAITEKRE--QQILFSS 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I  +   +  + S L+G  I VQ+GT  E      +       + + ++  
Sbjct: 106 KLFQFKSRLIARRGSSLAPTASGLAGKQIGVQSGTQFEGYALKNWTPLG--ANVVAYKSQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E+ A  R  R D             L          + + +S       I     E   
Sbjct: 164 DEVFADLRNGRLDGALLGTVEADYGFLRTPAGKGFAFVGEPLSMGDRGVGIGLRKDETG- 222

Query: 240 IVSWTHYAMVTA 251
            V  +  A + +
Sbjct: 223 -VQASINAAIAS 233


>gi|238798472|ref|ZP_04641952.1| Glutamine-binding periplasmic protein [Yersinia mollaretii ATCC
           43969]
 gi|238717710|gb|EEQ09546.1| Glutamine-binding periplasmic protein [Yersinia mollaretii ATCC
           43969]
          Length = 247

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   + +  + GFD+D   A++  +          P++      A
Sbjct: 23  AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKLDVKY---TLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+K +D+       T  R+    + F    Y  G   ++      I   + L+G  + V
Sbjct: 79  LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNEIKGEADLAGKVVAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +     DY KA+        F  ++         R DA   D   +     T   
Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +   + D I       A  QG ++  + V+    ++  
Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLRDKVNVALKSLKE 230


>gi|315646647|ref|ZP_07899764.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315277973|gb|EFU41294.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 480

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 93/283 (32%), Gaps = 25/283 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M + F  ++++  +++L F S            ++  +  G +     +     +     
Sbjct: 1   MKRKFTAWMTLFMVVVLSFGSIVHAEG------EKKTVILGTSADYAPYEFHKTIDGVDT 54

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +  +   +     +       L S ++D +    + T  R     
Sbjct: 55  IVGFDIDIAKEIAKDLGAE---LIIKDTSFDALLPELTSGRVDFVISGMNPTEERRK--S 109

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    Y   Q  ++ K+     +++  L GA I VQ  +  E       KA+      
Sbjct: 110 IDFSEPYYAAEQSVVVRKEDALKFNTLESLEGARIGVQKSSIQESIAKTIPKAN-----V 164

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +++ ++     + R D    +                             A  + +G
Sbjct: 165 VSLDKIPDLLLQLESERVDVVLAEYPIAKTNMDEAT--MAITDAKPTAENDSYAIGVRKG 222

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
           + E  + ++ T   +    ++       + ++   T  ++  F
Sbjct: 223 NEELLSSINATLERLKENNQIQKFVDEASDLAAGRTTENLNTF 265


>gi|225352760|ref|ZP_03743783.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156367|gb|EEG69936.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 517

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 14/260 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              V++  LI    ++ +        +K +     G +T    F     NG   G D++ 
Sbjct: 25  ILIVAVSALIASPVSANAAEIGDPSAVKGK-TYAVGTDTTFAPFEYR-ENGKMTGIDMEL 82

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA++     +  ++    L       AL S Q+D++      T  R+ +    F    +
Sbjct: 83  IRAIAQE---EGFEVTIQSLGFNAALQALSSNQVDVVIAGMSITDERKAT--YDFSNPYF 137

Query: 124 FDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             G    I      I+S   L G ++  + G+  E     +   +         ++   +
Sbjct: 138 QSGIQMAIAENNDSITSYKDLDGKTVVAKTGSEGESYAKQHASEYGY--TVTSVDQSSTM 195

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-EWYNIV 241
               ++   DA   D   L             ++ P +        A+ +G   +    +
Sbjct: 196 YEMVKSGNADAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGKNADLLAAI 252

Query: 242 SWTHYAMVTAEELGITQKNI 261
                 ++ + E        
Sbjct: 253 DDGLNKLIASGEYETIVAQY 272


>gi|257140949|ref|ZP_05589211.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia thailandensis E264]
          Length = 260

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 13/223 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K    ++ G++     F     +G   GFDVD    +   +    +K  ++  +    
Sbjct: 21  QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 77

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147
             AL++++ D +  +   T  RE  +   F    +      +  K   +  +   L G +
Sbjct: 78  IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 135

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V+ GT  E     ++       +   ++  +++ A   A R DA   D        L 
Sbjct: 136 VGVEQGTIQETYAKVHWAPKG--VNIQPYQNQDQVYADLIAGRLDAALQDAVQADIGFLK 193

Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
             R  +       ++            + + DT+    +    
Sbjct: 194 TPRGKDFAFAGSDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 236


>gi|167589680|ref|ZP_02382068.1| glutamine ABC transporter periplasmic protein [Burkholderia
           ubonensis Bu]
          Length = 250

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 79/235 (33%), Gaps = 18/235 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+    ++ +   +   +A           L  G +T  + F   + +  + GFD
Sbjct: 1   MSRRSFLKTAVVVAML-GASVAHADT-------KTLVVGTDTSFMPFEFKQGD-KYVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++             P++      ALQ++ ID+          R+ ++  +  P
Sbjct: 52  LDLWAEIAKDQGWKY---TIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDFS-AP 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S+  L+G  I  + GT T     D+ KAH        F  ++
Sbjct: 108 YYDSGLAAMVQTGNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +   A  A R DA     +      + N+   +  +    +S         +G  
Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGKVKVAGQPVSGDKYGIGFPKGSP 217


>gi|330684749|gb|EGG96444.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 486

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 82/259 (31%), Gaps = 23/259 (8%)

Query: 1   MY---KDFFVSILCLIILFFT----SFSTNASI-LGDIKKRGFLKCGINTGLVGFAE-VK 51
           M    K F V ++ +            +         IK+ G L+ G++           
Sbjct: 1   MKYFIKVFLVFLIIVGSTLTMKQPNINAEENDTNWQKIKESGELRVGLSADYAPMEFEKN 60

Query: 52  ANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           ANG   + G D++  + ++     +  K++ + +       AL++ +IDI+      T  
Sbjct: 61  ANGKTEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTTTPE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           RE    ++F           ++ K     + S+S      I VQ GT  E       +  
Sbjct: 118 REK--EVSFTKPYMMTNNIMLVKKNEKNHLKSISDFKDKKIAVQKGTDQEKIAKTEIE-- 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                     ++ E   + ++ +      +     A    N        +     K P  
Sbjct: 174 --NADVTSLNKLPETILSVKSGKTVGAILEKPVAEAYIKQNPE-LAFSDVKFNEEKKPTC 230

Query: 228 PAIIQGDTEWYNIVSWTHY 246
            A+ +        ++ T  
Sbjct: 231 IAVPKNSPILLKKLNQTIN 249


>gi|293606726|ref|ZP_06689079.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814876|gb|EFF74004.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 263

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 13/231 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +             +    A  LGDI KRG L+  + T     + +  +G+  G  V
Sbjct: 4   IKQWLGVASVAFAAATVALPAQADELGDIIKRGELRVAVQTSGPLMSFMDKSGNRTGLAV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + ++  +        Y     K    AL S + D+++ +   T  R     + F   
Sbjct: 64  EVAKRMADDLGVKLVLQDY---EWKGLLPALLSGKADMVAADMTPTPQRAA--QVLFSAP 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            ++     ++ K     S  +L   G ++ V   +T             MK        V
Sbjct: 119 MFYAETVAVVPKDSPYKSYEELDKAGVNVGVLGASTYAEVGKKMLPKATMKEFSGGSAPV 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
            +      + R DA    +S      +         +L  ++ + PLA A+
Sbjct: 179 GQA---LSSGRLDAGIMSMSTANQFLVDFGN---LRVLDGVMVREPLAFAV 223


>gi|126657487|ref|ZP_01728643.1| binding protein of ABC transporter component [Cyanothece sp.
           CCY0110]
 gi|126621191|gb|EAZ91904.1| binding protein of ABC transporter component [Cyanothece sp.
           CCY0110]
          Length = 297

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 91/251 (36%), Gaps = 13/251 (5%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           MYK    +++  +      S S   +++  + + G L       LV +A V    +  G+
Sbjct: 1   MYKKLPLITLSLITAFILPSRSLAETVIERVARTGILNVSTKVDLVPYAYVNDEDELVGY 60

Query: 60  DVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            V+    +    +  I  D      +     ER  +L ++++DI   +T +T  R+    
Sbjct: 61  SVELIELIRETLAKEIGKDVQIKVIVDDTLDERISSLLNREVDIAC-DTTFTWQRDRF-- 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F       G    + +   +SS        I +     +  ++         +   + 
Sbjct: 118 VDFSLAYGISGIKVFVRENSNLSSRESFKNKRIAIIESVLSPESIKVIE----SQVTIVN 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234
            + +E    A      D +  D + L   + T   P  + ++PD       +A  + + D
Sbjct: 174 VDSIEAGIKAVEDGEVDGFAFDGTILEGTRQTLTNPDAYKVVPDESYFKHGIACMVPEQD 233

Query: 235 TEWYNIVSWTH 245
           + + N+V+ T 
Sbjct: 234 STFLNLVNLTI 244


>gi|322411920|gb|EFY02828.1| putative ABC transporter (binding protein) [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 287

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 76/227 (33%), Gaps = 10/227 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   +  + L  L  T+ ++     S    IK++G LK          +    + +  
Sbjct: 1   MKKSVTLLFIGLASLLLTACASHPSQESSWDAIKEKGVLKVATPGTYQPTSFYNDDNELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++VD  + +   +     K++++     + F ++ S ++DI   N D T  R+    ++
Sbjct: 61  GYEVDMVKEIGRRL---DIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYHIS 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   G   +        S   LS       AG +    +    +    K       
Sbjct: 118 TPYKYGVGGM-IVRADGSSNMSKKDLSDWKGKKAAGASGTEYMK-VAQKQGAKLVTYDNV 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS 222
             +         R D    D  A   +   + +  P+ +V + D+  
Sbjct: 176 TGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQY 222


>gi|218887771|ref|YP_002437092.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758725|gb|ACL09624.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 288

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 82/221 (37%), Gaps = 11/221 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S++  + +RG L+ G +T  V +A     G + GF+VD    L+  +      ++++
Sbjct: 45  SEESVIAGVLERGVLRVGFST-FVPWAMQDVTGKFIGFEVDVATRLADDLGVK---VEFV 100

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
           P        AL + + D++          + +L + F     + G   + ++      ++
Sbjct: 101 PTKWSGIIPALLTGKFDVIIGGMSV--KPDRNLKVNFTIPYDYAGMALMANRATAKGFTT 158

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +       + + A T +    A   K    +    +F+          + R  A      
Sbjct: 159 LDDFDKPEVTIAARTGSTAAAA--AKKRLPRATLRLFDDEAPAIQEVLSGRAHAMVSSAP 216

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 L N      + +P   +  P+A A+ +GD +  N+
Sbjct: 217 LPAFEVLKNPDKL-FLPVPGTFTSEPVAFAVRKGDVDTLNV 256


>gi|88800375|ref|ZP_01115941.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Reinekea sp. MED297]
 gi|88776952|gb|EAR08161.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Reinekea sp. MED297]
          Length = 262

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 81/236 (34%), Gaps = 11/236 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    ++    +L     S  A  L +I+     +   +     F+ V  +G+  GFDV
Sbjct: 4   IKKTRQALTVAALLVALPLSLQARDLDEIQD-DVFQVVNSGAYPPFSFVDNSGNLVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +AL+  +  +   +            AL   + D    +   T  R     L F   
Sbjct: 63  DIAKALAEKMGVE---VNVQSSPWNGIIAALAGGRFDACICSMSNTEERRKV--LDFTDS 117

Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y  G   ++      ++S+   +G  +    G T      +     N  +    F+ + 
Sbjct: 118 YYSAGLSVWVQEDNNDVNSIEDFAGKRVGSTLGETGNQWAVENA---NGNWRNQTFQGLP 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           ++  A    R D   GD   +      ND   + V + ++  + P A +I Q   +
Sbjct: 175 DMLNALTTGRIDIMIGDDVPVLLAVKKNDTKIKMVDVGEL-PRWPAAISIQQDKPQ 229


>gi|148255507|ref|YP_001240092.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. BTAi1]
 gi|146407680|gb|ABQ36186.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. BTAi1]
          Length = 263

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 73/231 (31%), Gaps = 10/231 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64
              I  L  +   + +  AS L +I +RG L+ G+      F  +  A G + GFDVD  
Sbjct: 11  LTGIALLWGVASAALAEQASRLDEIMQRGSLRVGMTGDYKPFTYLDKATGKFSGFDVDMA 70

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL  A+      ++++P +  +     ++ + D+       TL R+     +   +   
Sbjct: 71  EALGKALGVK---VEFVPTSWPQLMKDFEADKFDVAMGGVSITLDRQKKGLFSTPIMREG 127

Query: 125 DGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                         ++S +   G  + V  G T E       KA        V      I
Sbjct: 128 KTPIARCSDTSKYQTLSDIDKPGTRVIVNPGGTNERFARANVKAA----DIRVHNDNVTI 183

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                    D    D S     +  +      V        S  A  + + 
Sbjct: 184 FEEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYWLQRD 234


>gi|251790086|ref|YP_003004807.1| glutamine ABC transporter periplasmic protein [Dickeya zeae
           Ech1591]
 gi|247538707|gb|ACT07328.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 248

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 12/212 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +T  V F   + +  + GFD+D   A++  +          P++      ALQ++
Sbjct: 27  LIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIARQL---NLTYTLKPMDFSGIIPALQTR 82

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
            +D+       T  R+    + F    Y  G   ++    + +     L+G  + V++GT
Sbjct: 83  NVDLALAGITITEERKR--AIDFSDGYYNSGLLVMVRADNQDVKGEQDLAGKVVAVKSGT 140

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +     DY KA+        F  ++        +R DA   D   +     T       
Sbjct: 141 GSV----DYAKANIKTKELRQFPNIDNAYLELGTNRADAVLHDTPNILYFIKTAGNGK-F 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + D I       A  +G  +  N V+    
Sbjct: 196 KAVGDSIKAQQYGIAFPKGSDDLRNKVNGALK 227


>gi|261493137|ref|ZP_05989672.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495782|ref|ZP_05992218.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308547|gb|EEY09814.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311192|gb|EEY12360.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 259

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 13/211 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    SI  L +    S     S+L  I  +G +  G       +    A+G   G+D
Sbjct: 3   MLKKL--SIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAPYTYHDASGKLTGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  RA++  +     K+++           L+ ++ D+++     T   E         
Sbjct: 61  VEVTRAVAEKL---DVKVEFKETQWDAMLAGLKGERFDLVANQVALT-SPERRATFDKSE 116

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   ++   +  I + + + G    V+   T      +  + +      +  + +
Sbjct: 117 SYSWDGAALLVREDETKIKTPADVKG----VKTAQTLSSNYGEIARENGAD--IVPIDGM 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +     +  R DA      +L      N  
Sbjct: 171 AQGLLLIQQKRADATFNSHLSLLDYLKKNPN 201


>gi|167587915|ref|ZP_02380303.1| extracellular solute-binding protein family 3 [Burkholderia
           ubonensis Bu]
          Length = 260

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 75/251 (29%), Gaps = 22/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L        + +              L+ G+      F     NGD +GFD
Sbjct: 1   MKHLKLWLALACAFGSGAACADGQQT---------LRFGLEAQYPPFESKAPNGDLQGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+           +++  +      ALQ ++ D ++   + T  R     + F  
Sbjct: 52  IDVGNAVCQ---TAKLSCKWVETSFDGLIPALQGRKFDAINSAMNATEQR--RQAIDFTT 106

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I Y      I     G+  +   L G  + V   +  E     +++   +    + ++  
Sbjct: 107 IIYRVPTQLIARNGSGLQPTPESLKGKRVGVLQASIQETYAKAHWEPAGVS--VVAYQDQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            +  A   A R DA      +     L+     +       +         +A  + +GD
Sbjct: 165 NQAYADLVAGRVDATLVLAPSGQRGFLSRPDGKDFSFAGQPVRDDRILGNGIAFGLRKGD 224

Query: 235 TEWYNIVSWTH 245
                 ++   
Sbjct: 225 DALKAKLNAAI 235


>gi|171779932|ref|ZP_02920836.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281280|gb|EDT46715.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 743

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 86/250 (34%), Gaps = 15/250 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
            SI+    L  T  ++  +    +K    +   +++    F     +G ++G DVD  +A
Sbjct: 265 SSIVASSSLKLTGDASAKATP--VKSTYKIV--MDSSFAPFEYQNDSGKYEGIDVDLIKA 320

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++     +   I+           A+Q+ Q D +      T  R+      F    Y   
Sbjct: 321 IAEQQGFN---IEISNPGFDAALNAVQASQADGVMAGMSITDARKEI--FNFSDPYYTSN 375

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
               + K   + S   L+G ++  + GT++   L+++   +        F+    +  + 
Sbjct: 376 ILLAVKKGSSVKSYEDLNGKTVGAKNGTSSYTWLSEHAAQYGY--TLRAFDEASTMYDSL 433

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTH 245
            +   +A   D      L+    +        D         A+ +G + E   + +   
Sbjct: 434 NSGSINALMDDE---AVLRYAIKQGRNFETPVDGEKSGEYGFAVNKGANPELLEMFNNGL 490

Query: 246 YAMVTAEELG 255
            A+V + E  
Sbjct: 491 AALVKSGEYD 500



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L ++   F              K   +    +T    F    ++  +KG D
Sbjct: 10  MKHKLKAIMLAMVSAIFVFGVDA--------KADTISIVSDTAYAPFEFKDSDQTYKGID 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +++    D   I            A+Q+ Q D L   T  T  R+      F  
Sbjct: 62  VDIINEVANREGWD---IDMTFPGFDAAVNAVQAGQADALMAGTTVTEARKKV--FTFSD 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +S+  QLSG ++ V+ GT  +  L +  K +  K     F+  +
Sbjct: 117 TYYDTAVVVYTRSDAKVSNYKQLSGKTVGVKNGTAAQAFLKENQKKYGYK--IKTFDTSD 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A    A   D   +         
Sbjct: 175 LMNNSLDAGSVYAAMDDQPVVQYAISQGKN 204


>gi|27468459|ref|NP_765096.1| glutamine-binding periplasmic protein [Staphylococcus epidermidis
           ATCC 12228]
 gi|27316006|gb|AAO05140.1|AE016749_86 glutamine-binding periplasmic protein [Staphylococcus epidermidis
           ATCC 12228]
          Length = 485

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 77/251 (30%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M     + +    +    S   N       IK RG L+ G++           +    ++
Sbjct: 7   MLSIIIIMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  + ++     +  K++ + +       AL++ +IDI+      T  R+    +
Sbjct: 67  AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F           ++ K       ++    G +I  Q GT  E       +         
Sbjct: 122 DFTKPYMITNNVMMIKKDDAKRYQNIKDFEGKTIAAQKGTDQEKIAQTEIE----DSKIS 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              R+ E   + ++ +      +     A    N        +     K     A+ +  
Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNS 236

Query: 235 TEWYNIVSWTH 245
               + ++ T 
Sbjct: 237 PVLLDKLNQTI 247


>gi|327441797|dbj|BAK18162.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Solibacillus silvestris
           StLB046]
          Length = 278

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 80/243 (32%), Gaps = 14/243 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            K  F+ +   +IL  T+   +            D  K+  L  G +     F  V  +G
Sbjct: 5   KKLSFLVLFSALILLLTACGNDGGAGSPSKETNADSGKKEVLVVGSSGIYPPFISVDEDG 64

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             +G+DV+    +  A+  +   I++        F  L + +ID +S     T  R    
Sbjct: 65  KAQGYDVEVLEKVGEALGYE---IKWEFAEFSGIFGMLDAGKIDTVSNLIAMTEERRA-- 119

Query: 115 GLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     + G    +  +   I+S+  L G  + V  G      L  + + +  +   
Sbjct: 120 KYDFSTPYAYSGATLVVHEENNSINSIEDLKGKKVGVLLGNNLHQFLEKWNEENGGEIII 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             ++ V          R DA+        A ++ ++     +   + +         ++ 
Sbjct: 180 TPYQDVSGTYNEVALGRLDAFIDVK-ITAASRIRDEGLPLKIYGEEYLVNFDYGFPFVRS 238

Query: 234 DTE 236
           +  
Sbjct: 239 EEN 241


>gi|312883096|ref|ZP_07742827.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369256|gb|EFP96777.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 279

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 82/242 (33%), Gaps = 7/242 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  F++    +++   SF+T    L  I +RG ++ G++T  V +A     GD  GF++
Sbjct: 13  RKLAFLAATVSVLVCSPSFATTTPNLDKINERGTIRVGMST-FVPWAMRNKQGDLIGFEI 71

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L+         ++++P        AL +K+ D++      T  R  S  + F   
Sbjct: 72  DVAKRLAKDSGWK---VEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSILFSVP 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               G     +K       S     S  ++             +    K   + F+   +
Sbjct: 127 YSHSGVQLAANKALANGFSSMADFNSRRIKIAARRGAYTVQVARETFPKAKILQFDDDSQ 186

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                      A            + +      +     +SK   A A+  G+++  N  
Sbjct: 187 AFQEVLNGNAHAVIASSPKPEFETIRHKD-QLFLPFGQRLSKGNEAFAVRLGESDKQNFF 245

Query: 242 SW 243
           + 
Sbjct: 246 NQ 247


>gi|52840736|ref|YP_094535.1| amino acid (glutamine) ABC transporter, periplasmic amino acid
           binding protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627847|gb|AAU26588.1| amino acid (glutamine) ABC transporter, periplasmic amino acid
           binding protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 244

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 71/228 (31%), Gaps = 13/228 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K +  L+   +     F  +  NG+ KGFD+D  + ++  +  +     +  +       
Sbjct: 23  KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSTVLP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           AL S Q D+       T   E      F    YF+G   +    + +  +SQL+G  I V
Sbjct: 79  ALNSGQDDVAIATITITE--ERKKNFDFSIPYYFEGMAAVFDISQPVKEISQLTGKKIAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GT  E+ L   F            +   +   A  A   D    D +           
Sbjct: 137 QLGTVMEIWLHQNFP----NAEITALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
              + IL            + +G      I S         E   +  
Sbjct: 192 GLSYSILAKAN--EGYGLVLKKGSPLRDEINSALENLKAKGEIQKLES 237


>gi|88856490|ref|ZP_01131148.1| putative transporter substrate-binding protein [marine
           actinobacterium PHSC20C1]
 gi|88814357|gb|EAR24221.1| putative transporter substrate-binding protein [marine
           actinobacterium PHSC20C1]
          Length = 295

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 83/275 (30%), Gaps = 36/275 (13%)

Query: 1   MYKDFFV-SILCLIILFFTSF--------------------STNASILGDIKKRGFLKCG 39
           M   F + +IL    L  T                      +  A +  DIK  G L  G
Sbjct: 1   MRIKFAMPAILAATALVLTGCVDNSTGTSTGGEGPVVGTDAAAIALLPDDIKAAGVLVIG 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           I+            G+  G++VD   A+++ +  +    QY P +  +   ++     +I
Sbjct: 61  IDPTYAPNEYKDDAGNPIGWEVDLGNAMAAKLGLET---QYEPSSFDKIIPSVTGGSYNI 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE-- 157
              +      RE    + F        Q     +       +   G ++ VQ GT  E  
Sbjct: 118 GLSSFTDNEEREKV--VDFVNYYEAGIQ--WAQQIGVDVDPANACGMTVTVQTGTYEETD 173

Query: 158 ---LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                  +   A       + F+  +E   A    R DA + D               E 
Sbjct: 174 ELPAKSQECTDAGKDPIDILKFDTQDEATNALALGRADAMSADSPITQYAVSKVADKIEL 233

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
               +    +P    + + D+E    +     +++
Sbjct: 234 A--GESFDTAPYGIVVQK-DSELSAALQAALQSLI 265


>gi|256849332|ref|ZP_05554765.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|256714108|gb|EEU29096.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
          Length = 494

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 85/265 (32%), Gaps = 29/265 (10%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGF 47
           M K      F   I  L  LF  +   NA        S++  IK+   L  G +      
Sbjct: 1   MKKAKIIKTFLAFITMLSTLFLFNQPVNAANKEVETGSVMKKIKQSKELVVGTSADYPPL 60

Query: 48  AEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                   N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSENDNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +   +G ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKIKDFAGKTVGAQTGSIQYSLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K    +       ++  +  A ++++      +          ND     V      
Sbjct: 176 KQMK----QSKVKGLGKINNLVLALKSNKISGIVMEEM-TAKAYQQNDNSLMAVRSDLRE 230

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++  A AI +G  +    V+ T  
Sbjct: 231 QQAGNAVAIAKGQNDLVAAVNKTIN 255


>gi|163857807|ref|YP_001632105.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bordetella petrii DSM 12804]
 gi|163261535|emb|CAP43837.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Bordetella petrii]
          Length = 263

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 73/232 (31%), Gaps = 13/232 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +       +     +    A  L DI KRG  +  + T     + +  +G   G  V
Sbjct: 4   IKQWLGVAALALTAASVATVARADALSDILKRGEFRVAVQTSGPLMSFMDKSGKRTGLAV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  R ++  +        Y     K    AL S + D+++ +   T  R     + F   
Sbjct: 64  ELARRMADDLGVKLVLQDY---EWKGLIPALLSGKADMVAADMTPTPQRAA--QILFSAP 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            ++     ++ K     S + L+    +I     +T             +K        V
Sbjct: 119 MFYAETVAVVPKDSPYKSYTDLNKGDVTIGALGASTYAEAARKMLPEAKLKEFSGGSAPV 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            +      + R DA    +S                +L  ++ + PLA A+ 
Sbjct: 179 GQAI---SSGRLDAGIMSLSTANQFLADFGN---LRVLDGVMVREPLAFAVA 224


>gi|238757265|ref|ZP_04618452.1| Glutamine-binding periplasmic protein [Yersinia aldovae ATCC 35236]
 gi|238704643|gb|EEP97173.1| Glutamine-binding periplasmic protein [Yersinia aldovae ATCC 35236]
          Length = 239

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 21/242 (8%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +  + L F   +  A           L    +T  V F   + +  + GFD+D   A++ 
Sbjct: 1   MAALTLAFAVNTYAAE--------KELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +     K    P++      ALQ+K +D+       T  R+    + F    Y  G   
Sbjct: 52  KL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLV 106

Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           ++      I S + L G  + V++GT +     DY KA+        F  ++        
Sbjct: 107 MVKANNNDIKSEADLKGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGT 162

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              DA   D   +     T     +   + + I       A  QG ++    V+    ++
Sbjct: 163 GNADAVLHDTPNILYFIKTAGNG-QFKAVGEPIKAQQYGVAFPQG-SDLREKVNAALKSL 220

Query: 249 VT 250
             
Sbjct: 221 KE 222


>gi|45358787|ref|NP_988344.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component-related [Methanococcus maripaludis
           S2]
 gi|45047653|emb|CAF30780.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component-related [Methanococcus maripaludis
           S2]
          Length = 254

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 11/217 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  GI   +        +G+ KGFD+D  + +++ +   P    +          AL 
Sbjct: 36  GVLTVGITPEMPPQQYY-EDGELKGFDIDLMKEIANNMGLKPE---FKIYEYGGAHEALL 91

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + +ID L      T+  E    + F            + +      +  L+G +I V   
Sbjct: 92  NGEIDCLP---SMTISPERKEDMDFSRAYIQTYVVVAVFENSPYRELKDLNGKNIAVVTN 148

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T TE    +Y  + N   +   ++ VE + +   +   DA   D   L     +     E
Sbjct: 149 TYTEDWAKEYLGSLN--ANIKSYDSVEGLVSDVYSGNIDAVVTDQIQL--DYYSKQNNFE 204

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             ++ + ++    A A+ + +    N ++   + +  
Sbjct: 205 SRLIFEKMTIEYWAIAVKKDNHNLQNEINDVLFELDE 241


>gi|157150220|ref|YP_001450326.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|157075014|gb|ABV09697.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 485

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 72/237 (30%), Gaps = 14/237 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +     +L    L   + S          +K         ++    F     N  + G
Sbjct: 1   MKQKIIALLLTFSALLTFASSVVHAEDKATPVKS--KYVISSDSSFAPFVFQDNNNQYTG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  +A++     +   I             +Q+   D +      T  R+ +    F
Sbjct: 59  IDMDLIKAIAKDQGFN---ITIKNPGFDVALNDVQTGHADGMIAGMTVTDARKKT--FDF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y       + K   ISS   L G ++ V+ GT+++  L D  K +  K     F  
Sbjct: 114 SDSYYSANSILAVAKSSTISSYEDLKGKTVGVKNGTSSQTFLTDNQKKYGYK--IKTFSD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              +  +  +    A   D   +   +    +  +            LA A+ +G  
Sbjct: 172 GASLYDSLNSGSVAAIMDDEPVI---RYAIKQGKKFKTPIKGTPSGKLAFAVKKGSN 225


>gi|86607415|ref|YP_476178.1| amino acid transporter, amino acid-binding protein [Synechococcus
           sp. JA-3-3Ab]
 gi|86555957|gb|ABD00915.1| amino acid transporter, amino acid-binding protein [Synechococcus
           sp. JA-3-3Ab]
          Length = 266

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 75/227 (33%), Gaps = 9/227 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++    +          A    +I + G ++  +   L         G  +GF+++  R 
Sbjct: 16  MAAGLALACLGRGIPAAARPWPEIVRSGQVRIAVKDNLRPLGFRDPMGKLQGFEIELARE 75

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L S +      ++ +P+   +R  A+ + ++D+       T  R     + F    Y DG
Sbjct: 76  LGSRLLGSAEAVELVPVANVKRLQAVAAGEVDLAIAQLGITPDRAR--QVEFTSPYYQDG 133

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              ++ +       S + GA I V  G+     L  Y          +  +   E     
Sbjct: 134 PSLVVARSHNWERWSDVGGARIAVLRGSAAIPYLQRYLP----GVELVAVDSYREGAELL 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                 A+  D S L      +    +   L   ++   L  A+ +G
Sbjct: 190 LKGAVQAWAADRSVLAGWLAEHP---QFQFLGSPLAAVGLGIALPKG 233


>gi|238025448|ref|YP_002909680.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia glumae BGR1]
 gi|237880113|gb|ACR32445.1| Cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia glumae BGR1]
          Length = 260

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    A+G   GFD+D    +   I    +K  ++  +      
Sbjct: 23  KDWSTVRFGVDASYPPFESKGADGKLVGFDIDLGNEICRRI---AAKCVWVENDFDGLIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL++++ D +  +   T  R   +   F    +      +  K   I  + + L G ++ 
Sbjct: 80  ALKARKFDGVLSSMSMTPQRAEQIA--FSDKLFNTPTRLVAKKGSNILPTAASLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y+       +   ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWAPKG--VNVQPYQNQDQVYADLLSGRLDATLQDAVQAEIGFLKTP 195

Query: 210 RPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           R + +                    + + DT+    +     AM
Sbjct: 196 RGAGYAFAGGDIDDPKTLGEGAGVGLRKEDTDLKAKIDGAIVAM 239


>gi|152999486|ref|YP_001365167.1| extracellular solute-binding protein [Shewanella baltica OS185]
 gi|160874106|ref|YP_001553422.1| extracellular solute-binding protein [Shewanella baltica OS195]
 gi|151364104|gb|ABS07104.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS185]
 gi|160859628|gb|ABX48162.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS195]
 gi|315266338|gb|ADT93191.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS678]
          Length = 244

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 16/224 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD+D  + ++         ++   +     
Sbjct: 23  KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
            +AL S +ID ++     T  R+ ++  +  P         +      I ++  + G   
Sbjct: 80  IVALNSGKIDFIASGMTITAERQANVNFS-EPYYEATQVVLVNKDNDSIHTLEDIKGKHF 138

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GTT +        +     +   F    E     +  + D    D          N
Sbjct: 139 AVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNAKVDLVLFDSEPAANYLAKN 192

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               E  ++           A+ +   E    ++ T  A + A+
Sbjct: 193 P---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232


>gi|329298257|ref|ZP_08255593.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Plautia stali symbiont]
          Length = 243

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++  + +   +                ++   +     F  +  N    GFD
Sbjct: 1   MKKWIVAAVMATLAMNAYAAE-------------KIRFAASATYPPFESLDQNNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T  R  S  + F  
Sbjct: 48  IDLAKALCQQM---QAECTFTNNAFDSPIPSLKFRRYDAVISGMDITAER--SKQVDFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I HK    S  SQL G  I V+ GTT +  L +           + ++  +
Sbjct: 103 PYYANSAIVIAHKG-EYSDFSQLKGKRIGVENGTTHQKYLLEKHPE----VIAVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R +   GD + +      N         I       + L  A+ +G++   
Sbjct: 158 NAILDLKNGRLNGVFGDSAVVNQWLKANADLSAVGEHITDSDYFGTGLGIAVRKGNSALL 217

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 218 QQLNSALAAL 227


>gi|307352567|ref|YP_003893618.1| extracellular solute-binding protein family 3 [Methanoplanus
           petrolearius DSM 11571]
 gi|307155800|gb|ADN35180.1| extracellular solute-binding protein family 3 [Methanoplanus
           petrolearius DSM 11571]
          Length = 269

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 22/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEVK 51
           M    + +IL LI+     FS      G+         +++      GI+     ++ V 
Sbjct: 1   MTVKVYGAILVLILALAMVFSGCTDTSGENQTSTDGVNVEETTTYIVGIDGEYKPYSYVD 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G+  GFDVD  + ++     +  +++ +P+       AL + +ID++      T  R 
Sbjct: 61  TDGNPVGFDVDSIKWIAEK---EGFEVEIIPVAWDGIIPALMAGKIDMVYSGMTITDKR- 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMK 170
               + F    +   Q   ++     +    +SG   I  Q+GT+    + +      + 
Sbjct: 117 -LEQVNFSIPYWKVNQSVAINDVNNYTMDDFMSGKYIIGAQSGTSGAQWVEENLIDTGIM 175

Query: 171 YHP---IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                   +     +    +  R D    D   +  L+    +P    I+ +I +     
Sbjct: 176 PAENFKNTYSTFPLVSEDLKNQRIDFAIYDKPPM--LEAIEGKP--LSIIGEIDTNEEYG 231

Query: 228 PAIIQGDTEWYNIVSWTHY 246
            AI + D E    ++    
Sbjct: 232 VAIRKSDVELLETINDGLT 250


>gi|28379591|ref|NP_786483.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum WCFS1]
 gi|300769531|ref|ZP_07079417.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|28272431|emb|CAD65355.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum WCFS1]
 gi|300492946|gb|EFK28128.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 267

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 22/256 (8%)

Query: 1   MY---KDFFVSILCL-IILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51
           M    K   V++L L + +  T+  +N S         ++K G L  G+      ++   
Sbjct: 1   MKSWVKKLSVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYR- 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GF+VD  +A++  +       +++P         L + + D++  N   T  R+
Sbjct: 60  KDGKLTGFEVDLGKAVAKKMGLKA---KFVPTKFDSLVAGLDTNKFDVVMNNMSETAARK 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F     +      + K   IS ++ + G      A TTT     D   A  +  
Sbjct: 117 K--KYLFSTPYIYSKSQLAVKKNSSISKITDIKGKK---VAETTTSNNATD---AKRLGA 168

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAI 230
                +  ++        R         + YA    N + +  +I   D I+   +   +
Sbjct: 169 TITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIV 228

Query: 231 IQGDTEWYNIVSWTHY 246
            +   +    +S    
Sbjct: 229 TKQHPKMQKQISKAIQ 244


>gi|311108047|ref|YP_003980900.1| extracellular solute-binding protein, family 3 family protein 8
           [Achromobacter xylosoxidans A8]
 gi|310762736|gb|ADP18185.1| bacterial extracellular solute-binding protein, family 3 family
           protein 8 [Achromobacter xylosoxidans A8]
          Length = 261

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 12/223 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L D+   G L+ G+      +    A G+  G D+D  + +++ +      ++ + + 
Sbjct: 25  DKLQDVLGAGKLRVGVLMDAAPWGFKDAKGEAAGLDIDLAKLMAADMGVK---LELVQVT 81

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-MHKKKGISSVSQL 143
              R  +L + ++D+L      T  R  +  + F         G           SV +L
Sbjct: 82  GASRIPSLLAGKVDVLIAAAGATPER--AQQVMFSQPYAAVNLGVYGGDAMPQAKSVDEL 139

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G SI V  G+T ++ L D           + FE      AAY A + +++  + +   A
Sbjct: 140 KGHSIAVAKGSTLDIWLTDNAP----GAKLVRFEDTPSAVAAYLAGQSESFAENSAI--A 193

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           LK+T D P+    L  +I +SP   A+ QG     N ++   +
Sbjct: 194 LKVTEDNPARAPQLKFLIRQSPAHAAVQQGQQNLLNWINTFLF 236


>gi|160895679|ref|YP_001561261.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160361263|gb|ABX32876.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 268

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 8/181 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A +L +I+K G L+  I      F  +  +   +G+D+D    ++  +      ++ +P
Sbjct: 31  HADMLANIQKAGVLRVAIPQDFPPFGSLGTDLKLQGYDIDMAALVAQELGVK---VELVP 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + +  R   L + + DI+  +      R     + F        +     K   I + + 
Sbjct: 88  VTSTNRIPFLTTGKADIVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDVSIKAPAD 145

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+G ++ V  G+T +L L     A         +E       +Y   +    T       
Sbjct: 146 LAGKTVGVTRGSTEDLALTQVAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVAN 202

Query: 203 A 203
           A
Sbjct: 203 A 203


>gi|322372982|ref|ZP_08047518.1| polar amino acid uptake (PAAT) family ABC transporter, polar amino
           acid-binding protein [Streptococcus sp. C150]
 gi|321278024|gb|EFX55093.1| polar amino acid uptake (PAAT) family ABC transporter, polar amino
           acid-binding protein [Streptococcus sp. C150]
          Length = 282

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 70/256 (27%), Gaps = 18/256 (7%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K FF  I L L  +F  + S+ +S       I+KRG +K      L          + 
Sbjct: 1   MKKKFFAVISLALAAVFLVACSSQSSGEKNWEKIEKRGTIKVATAGTLYPQTYHDDKNNL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DV+  + +   +     KI +  +       A+ S Q+D    N       +     
Sbjct: 61  TGYDVEILKEVGKRL---KLKIDFTEMGVDGMLTAVNSGQVD--IANYSLEDDNKNVKKF 115

Query: 117 AFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                  +     ++      GISS   L G      A T               +    
Sbjct: 116 LRSEPYKYSFTSMVVRDSDNSGISSWKDLKGKKAAGAASTKYMKIAKKM----GAELVVY 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQ 232
                +         R D    D                 V + D I  +P   +     
Sbjct: 172 DNVTNDVYMQDLVNGRTDVIVNDYYLQKMAVAAVKDKYP-VKINDGIYSNPYSTSFTFSL 230

Query: 233 GDTEWYNIVSWTHYAM 248
            +      V+     M
Sbjct: 231 KNKVLQEKVNKAIKDM 246


>gi|296156702|ref|ZP_06839540.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295893301|gb|EFG73081.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 289

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 14/233 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +IK RG+L          F  V A+G   G+D D    +   I  D   ++   +    
Sbjct: 45  EEIKARGYLSVATEDDYTPFEFV-ADGKNTGYDNDLLALVRKKIGVD---VKQQVMPWSG 100

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               + + + D+       T  R+ +    F   T      + + K   I S   L G  
Sbjct: 101 ILPGVTTGKYDMALTAVLVTDERKKT--FDFASPTCEAVTFYAVKKGSTIKSPDDLVGKV 158

Query: 148 ICVQAGTTTELTLADYFKAHNMK------YHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +  + G+     L  + +    K         + ++   E        R DA      +L
Sbjct: 159 VGAETGSAMLADLKLFNEELKKKHGGNGLKQIVEYQSYPEAYQDLGLGRVDAVANTQISL 218

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            +L     RP   V+   I   + +A A+ +G+++   +V      +  + E+
Sbjct: 219 NSL--VKTRPDTFVVGQAIGKPTYIAWAVKKGNSDVLKMVDAALLELRKSGEM 269


>gi|327193779|gb|EGE60656.1| extracellular solute-binding protein family 3 [Rhizobium etli
           CNPAF512]
          Length = 257

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 85/242 (35%), Gaps = 14/242 (5%)

Query: 35  FLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            ++ G+ N     F    A+G+W G+++D   A+ + +     K   + ++      ALQ
Sbjct: 23  EVRFGVMNESYPPFFAKDASGEWHGWEIDLMNAVCAEM---KEKCSIVDISWDGLIPALQ 79

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           SK+ D++  +   T  R     + F    Y      I  K +   ++   + G +I +Q 
Sbjct: 80  SKKFDVIWSSMSNTAERSKV--IDFTDKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQV 137

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRP 211
            T        YF           ++ ++E      + R D   GD  AL   LK    + 
Sbjct: 138 STIQSEYYKKYFAGA---AEEKTYQTLDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKD 194

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               +      K  L   +  G  +    +     A + A          + ++K   + 
Sbjct: 195 CCAKMGDVADDKEILGAGVSGGLRKEDTELKAKLNAAIAA---VRANGQYDAITKKYFDF 251

Query: 272 DV 273
           D+
Sbjct: 252 DI 253


>gi|319937508|ref|ZP_08011913.1| arginine-binding extracellular protein artP [Coprobacillus sp.
           29_1]
 gi|319807348|gb|EFW03957.1| arginine-binding extracellular protein artP [Coprobacillus sp.
           29_1]
          Length = 252

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V ++ ++ +  T+     +     KK   L  GI+     +  +    + +GFD
Sbjct: 1   MKKILKVMLVIMMAVMVTACGGGDNTDSGDKKETKLLIGISPDYPPYESLNTKNEMEGFD 60

Query: 61  VDFCRALSSAIFDDPSK--IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D  + L   +  +      ++  ++ +    ++++ Q+D+                + +
Sbjct: 61  IDMTKELVDIMNKNGGNYSYEFKQMSFESIRSSVETDQVDLGISGFTKHDE----WDVEW 116

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   Q  ++     I + + L G  +  Q G T E    D   A            
Sbjct: 117 SHKYNDSKQVALIAGDSNIKTAADLEGKKVGAQVGATGETCAKDIKNA-----DVKAVTD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           V+ +    R    DA   D    YA+       S   ++   + +        +G+TE  
Sbjct: 172 VKVLVETLRTGGVDAVILD----YAVAKNYVDNSGFKMIDQALLEEENLIISKKGNTELM 227

Query: 239 NIVSWTHYAMVTAEELG 255
           N V+      V +++  
Sbjct: 228 NAVNKALDEFVGSDKYN 244


>gi|256824981|ref|YP_003148941.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Kytococcus sedentarius DSM 20547]
 gi|256688374|gb|ACV06176.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Kytococcus sedentarius DSM 20547]
          Length = 290

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 79/214 (36%), Gaps = 13/214 (6%)

Query: 34  GFLKCGINTGLVGFAE--VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L    +     F      A+  + GFD+D    ++  +  +   ++    +  +  LA
Sbjct: 49  GKLTVCSDIPYAPFEFEDPDADSGYSGFDIDITSEIAKGLDLE-LAVKDADFSGLQSGLA 107

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S Q D+++     T  R+ +LG  F    Y   Q  ++ +   I+ +  L+G  + VQ
Sbjct: 108 LNSGQCDLVASAMTITDDRKKNLG--FSDGYYDSLQSLLVPEGSDITGIGDLNGKKVGVQ 165

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T+ E    +  +        +      E+  A +A + DA   D+         N + 
Sbjct: 166 QATSGEKYAQENAE----GAQLVALPSNAEMVQAIKAGQVDALLQDLPVNV----DNAKA 217

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + ++ +  +      A  + +    + V+   
Sbjct: 218 GGYEVVEEFDTGETYGLAAKKDNQALLDAVNAEL 251


>gi|126698330|ref|YP_001087227.1| amino acid ABC transporter substrate-binding protein [Clostridium
           difficile 630]
 gi|254974368|ref|ZP_05270840.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-66c26]
 gi|255091762|ref|ZP_05321240.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile CIP 107932]
 gi|255099866|ref|ZP_05328843.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-63q42]
 gi|255305754|ref|ZP_05349926.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile ATCC 43255]
 gi|255313492|ref|ZP_05355075.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-76w55]
 gi|255516180|ref|ZP_05383856.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-97b34]
 gi|255649276|ref|ZP_05396178.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-37x79]
 gi|260682447|ref|YP_003213732.1| amino acid ABC transporter substrate-binding protein [Clostridium
           difficile CD196]
 gi|260686046|ref|YP_003217179.1| amino acid ABC transporter substrate-binding protein [Clostridium
           difficile R20291]
 gi|306519376|ref|ZP_07405723.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile QCD-32g58]
 gi|115249767|emb|CAJ67584.1| ABC-type transport system, aminoacid-family extracellular
           solute-binding protein [Clostridium difficile]
 gi|260208610|emb|CBA61331.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile CD196]
 gi|260212062|emb|CBE02645.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           difficile R20291]
          Length = 271

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 68/225 (30%), Gaps = 14/225 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFD 73
             S     + L  IK  G L  G +     F     V      KGFD+      +  +  
Sbjct: 22  GCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIMLAEEFAKELGV 81

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132
               ++   ++      AL + Q+DI+      T  RE    + F  + Y      I+  
Sbjct: 82  K---VEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREK--SVDFSELYYLSRNAVIVKD 136

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                + +   L    + VQAG+  E  + +  K           + + ++    +    
Sbjct: 137 ADIDKVKTEDDLKKLRVGVQAGSIQEEYVVNTLK----MTTTKSLKAIPDLITELKNGNI 192

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           DA   + +         D                +A AI + D  
Sbjct: 193 DAVVTNEAVSLINVKKYDGIKMANTEVGKDVTEGMAAAIKKSDNN 237


>gi|317406067|gb|EFV86331.1| extracellular solute-binding protein family 3 [Achromobacter
           xylosoxidans C54]
          Length = 286

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 78/229 (34%), Gaps = 15/229 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           + L  +K+RG L  G++     F  +    G   GF  +  R +++ +      +    +
Sbjct: 25  ATLDRVKQRGKLVVGVDGASPPFGLLDPATGKVGGFQTELGRDIATRLGVTLETVP---V 81

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A  R   LQ+ ++D+L  N  WT  R   L  A  P     G   ++ K+ GI     L
Sbjct: 82  TAATRVQFLQAGKVDLLIANIQWTQERSEILSYAPTP-YNLVGGAAMVSKRSGIKRWEDL 140

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G   CV  G+     L + + A            + E   A +   CDA      ALY 
Sbjct: 141 KGKVACVSQGSNFAKPLQETYGA-----VVKGLRNIPESLLALKGGSCDASVHIQPALYE 195

Query: 204 LKLTNDRPSEHVIL----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                    E        PD +  SP      + + +    V       
Sbjct: 196 TLHG-PNGKEWDGFELATPDQLIPSPTVIWTRRNEADTRAFVDGVIRDW 243


>gi|306827617|ref|ZP_07460897.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Streptococcus pyogenes ATCC
           10782]
 gi|304430180|gb|EFM33209.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Streptococcus pyogenes ATCC
           10782]
          Length = 270

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      L  ++L+  +    +  L     IKK   L   ++     F     V     
Sbjct: 3   FKKIRFGFLLCLLLYPLAACNKSEQLNHHERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +  D   ++  P++      +LQ+ + D+       T  R     
Sbjct: 63  IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      +M       +  +S L+G  +  Q G+  E  +       N     
Sbjct: 118 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     +A +  A T +          +   +              A A+ + 
Sbjct: 174 ISLTAMGEAINELKAGQVYAVTLETPVAAGFLAQHKDLALAPFSLKTSDGDDKAVALPKN 233

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             +    V+     +   E   
Sbjct: 234 SGDLTKAVNKVIAKLDEQERYK 255


>gi|16264424|ref|NP_437216.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Sinorhizobium meliloti
           1021]
 gi|15140561|emb|CAC49076.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
          Length = 280

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 21/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58
           M K     I  L +    + S NA+ L   IK  G +             V     + +G
Sbjct: 5   MNKH----IAALTVACLAATSANAAGLPERIKSAGKVVVANQPNYPPMEYVDPATNELRG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D   AL+  +    + +++  +  ++   +LQ+ ++D++         R     L F
Sbjct: 61  VDIDLGVALAKELG---TTVEWSNIGFEQMISSLQTGRVDLIHSGMSDLPKR--RDTLDF 115

Query: 119 RPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-----MKY 171
                  G  F     +K    +++   G  + +   T+     A +  A+         
Sbjct: 116 ID-YMKSGAQFYTSFARKDEFKTLTDFCGKIVGMSRRTSFPDETAKWSTANCEAKGLPAV 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +  A  +  R DA       L  L         + ++ +  +         
Sbjct: 175 KVVGTEGSADARAQLKQGRLDAAVQGSETLPYLMDLEKD--TYAVVGEPFTVVYQGIGFA 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + DTE  +  +    A++ + E  
Sbjct: 233 KKDTELRDAYAAALKALMESGEYK 256


>gi|107021924|ref|YP_620251.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116688872|ref|YP_834495.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105892113|gb|ABF75278.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116646961|gb|ABK07602.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 259

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 78/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKTPAGQLQGFDVDVGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+    + F P  Y      +  +   +   V+ L G  + V  G
Sbjct: 83  RKFDAINSAMNITAKRK--QSIDFTPPIYVVPIVMVAKRGSPLKPDVASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + ++  ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + + D      +     A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKNDKALQAKIVGALDAL 238


>gi|260597267|ref|YP_003209838.1| putative ABC transporter arginine-biding protein [Cronobacter
           turicensis z3032]
 gi|260216444|emb|CBA29559.1| Arginine-binding periplasmic protein 1 [Cronobacter turicensis
           z3032]
          Length = 251

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 75/215 (34%), Gaps = 16/215 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + A     GFDVD   AL   I    +   +          AL+ 
Sbjct: 30  TIRFATEASYPPFESMDAGNKIVGFDVDLANALCKEI---DATCTFTNQAFDSLIPALKF 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K++D +    D T  R+    + F    Y +   F+  + K  SS+ QL G  + VQ GT
Sbjct: 87  KRVDAVMAGMDITPERQK--QVLFTTPYYDNSALFVGLQGKN-SSIEQLKGKRVGVQNGT 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  + D           + ++  +      +  R DA  GD + +         P   
Sbjct: 144 THQKYITDKHPE----ITTVPYDSYQTARLDLQNGRIDAVFGDTAVVTEWL--KTNPKLA 197

Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245
            +   +  K      L  A+ QG+TE     +   
Sbjct: 198 AVGDKVTDKDYFGTGLGIAVRQGNTELQQKFNTAL 232


>gi|257469868|ref|ZP_05633960.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|317064097|ref|ZP_07928582.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313689773|gb|EFS26608.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 241

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 24/246 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + ++  ++L  ++ +           +  +  G N     F  +  NG+  GFD
Sbjct: 1   MKKFFKLLLIGSMVLSVSATA---------LAKDKIYVGTNAEFPPFEYL-ENGEITGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +  D   I+ + +       ALQ K++D++         R     ++F  
Sbjct: 51  MDLVHEIGKLVDAD---IKIVDMGFDGLLPALQMKKVDLVIAGMTANEER--MKTVSFTQ 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  I+      I S + L G  + V  G T ++ +++             F   
Sbjct: 106 PYYTASQVIIVKDGNDSIKSFADLKGKKVGVMLGFTGDMVVSEI-----DGVKIERFNAA 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +A + +A   D          N      V+      +   A A+ + D     
Sbjct: 161 YAGIMALQAGKVEAIVLDSEPAKNYVAQNKG---LVLADADAEQEEYAIAVRKNDKALLE 217

Query: 240 IVSWTH 245
            V    
Sbjct: 218 KVEKAL 223


>gi|225075328|ref|ZP_03718527.1| hypothetical protein NEIFLAOT_00331 [Neisseria flavescens
           NRL30031/H210]
 gi|224953503|gb|EEG34712.1| hypothetical protein NEIFLAOT_00331 [Neisseria flavescens
           NRL30031/H210]
          Length = 275

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L        ++              ++  I  +G +  G       
Sbjct: 2   MLKKFVLGGIAALVLAACGGEGGSASSSASAQSAGASGSLIERINNKGTVTVGTEGTYAP 61

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 62  FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLEAGRFDVVANQVGL 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G    V+   +      +  KA
Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKG----VKTAQSLTSNYGERAKA 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 174 AG--AELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215


>gi|78357349|ref|YP_388798.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78219754|gb|ABB39103.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 246

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 24/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L +++    + +              +    +        + A+    G+ 
Sbjct: 1   MLKKICLAMLAVMMTANVALAER-----------TIVFAHDATWPPMEYMSADKKVVGYA 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+  A++              +     F  L + + D ++ +   T  R+    + F  
Sbjct: 50  VDYMDAVAKEAGFTAEH---RNVAWDGIFAGLANGEYDAIASSVSITEQRKR--AMDFSI 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  +++K     S + L G ++  Q GTT    +            P  F+ + 
Sbjct: 105 PYFEVKQAVVLNKSVEAKSFADLKGKTLGAQIGTTGYFAI-----KKAEGVTPRSFDEIG 159

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEW 237
               A      D    D        L  +   +  +   + +   K     A+ +G++E 
Sbjct: 160 LAMEALYNGNIDGVVCDDPVAANYALQQEEYAKRLKIAFIVEAEEKEYYGVAVNKGNSEV 219

Query: 238 YNIVSWTHYAMVT 250
             ++     A+  
Sbjct: 220 LALIDKGIKAVKE 232


>gi|150398176|ref|YP_001328643.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150029691|gb|ABR61808.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 265

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 10/211 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G N G V +   +A+G   GF+VD    ++  +      ++++       F A+QS 
Sbjct: 29  LTVGANIGNVPWEFQEADGKIVGFEVDLVNEIAKRLGK---SVEFVNTPFNGLFPAVQSG 85

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID+   +   T  R     ++F    Y   Q   +    G + +  + G  + V  G+T
Sbjct: 86  RIDMAISSITITDKR--LESVSFAQPYYDSDQSLTVTATSGTTGLKDMEGKVVGVDTGST 143

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            ++  AD  KA         FE +        A R D Y  DI AL           +  
Sbjct: 144 GDMW-ADRNKADYKFGEIRRFEGLSPAMLDLVAGRVDGYISDIPALLYYV---KDKPDLK 199

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           ++  I +    +    +G       V+    
Sbjct: 200 VVERIPTGEKYSIMFNKGAP-LAAEVNDVIT 229


>gi|294788187|ref|ZP_06753430.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Simonsiella muelleri ATCC 29453]
 gi|294483618|gb|EFG31302.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Simonsiella muelleri ATCC 29453]
          Length = 275

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 70/225 (31%), Gaps = 25/225 (11%)

Query: 1   MYKDFFVSILCLIILFF---------TSFST-----NASILGDIKKRGFLKCGINTGLVG 46
           M K   +++  +  L           TS S      + S++  I ++G +  G       
Sbjct: 1   MLKKITLTVATVFALVACGQHDGATQTSASAMESNVSGSLIDRINQKGTITVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F+   A+G   G+DV+  RA++  +      +++           L++ + DI++     
Sbjct: 61  FSYHDASGKLTGYDVEVVRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDIVANQVAL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFK 165
           T   E            + G   +       I +++ + G        +           
Sbjct: 118 T-SPERQKTFDKSEPYSWSGAAMLARTDETRIKNLADIKGIKAAQTLSSNYGEM------ 170

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           A   +   +  + + +     +  R D    D  +       N  
Sbjct: 171 AVKAQAEIVPVDGMAQAITLVQQKRADVTLNDELSFLDYLKKNQN 215


>gi|227487312|ref|ZP_03917628.1| glutamine ABC superfamily ATP binding cassette transporter,
           glutamate-binding protein [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227092738|gb|EEI28050.1| glutamine ABC superfamily ATP binding cassette transporter,
           glutamate-binding protein [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 288

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 83/289 (28%), Gaps = 19/289 (6%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +  F  I  L +        ST    L      G +  G      G      +    G
Sbjct: 1   MMRRIFAIISALAVAVTATACGSTEPRSLVRSVDSGHVILGTKYDQPGLGMRNPDKTMTG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            DV+        ++        +I +    +  R   +++ ++D+++        R    
Sbjct: 61  LDVEVATYVVNHIADQRGVAHPEITWRETPSATRETVIKNGEVDMIAGTYSINASRAK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172
            + F        Q  ++      + S+  L  G  +C   G+T    +            
Sbjct: 119 SVNFGGPYLLTHQALLVRSDDHTLQSLQDLDKGRKLCSVTGSTPAQKVKKSLP----GVQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAP 228
              ++       A    + DA T D + LY   L      E + +        +      
Sbjct: 175 LQEYDSYSSCVEALHQKKVDAMTTDATILYGFALQYPGEFEVIEMTKEDGKPFTNEHYGL 234

Query: 229 AIIQGDTEWYNIVSWTHYAMV-TAEELGITQKNINQVSKDTTNPDVQRF 276
            + + D E    ++    AM        +  KN+ + +      +V   
Sbjct: 235 GLAKDDAESTEAINDAVRAMQDDGSFQAMVDKNLGENASVVEADEVGNL 283


>gi|269216150|ref|ZP_06160004.1| extracellular solute-binding protein, family 3 [Slackia exigua ATCC
           700122]
 gi|269130409|gb|EEZ61487.1| extracellular solute-binding protein, family 3 [Slackia exigua ATCC
           700122]
          Length = 282

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 13/214 (6%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             G +     +  V  +G + GFD++  + + +    +       P+N   +   L    
Sbjct: 48  IVGFDQEYPPYGFVGDDGQYTGFDLELAKEVCARNGWNFKA---QPVNWDAKDAELNGGA 104

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGT 154
           +  L         RE      F      +GQ  ++   K     ++  L+G ++  Q  +
Sbjct: 105 VTCLWNGFTK-EGREK--NYTFSEPYMLNGQVVVVKADKASEYGTLDALAGKTVVTQVDS 161

Query: 155 TTELTL---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +    L        A                    ++  CDA   D+S   A    +  P
Sbjct: 162 SALEVLQGAKADLNASFAGGAVNQVSDYNAAFMDLQSGACDAVACDLSI--AEYQMSANP 219

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + +L D +S    A    +G+TE  + V+ T 
Sbjct: 220 GAYAVLKDTLSDEHYAVGFAKGNTELADAVTETL 253


>gi|34498438|ref|NP_902653.1| amino acid ABC transporter periplasmic protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34104292|gb|AAQ60651.1| probable amino acid ABC transporter, periplasmic-binding protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 254

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 73/229 (31%), Gaps = 14/229 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L DI+K G LK G       F    A G   GFDV+  +A+++ +   P   Q++   
Sbjct: 22  DDLADIRKAGVLKIGTEGTYAPFTYHDAAGSLTGFDVEIAQAIAARLGVKP---QFVEGK 78

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQL 143
                  L  K+ D++      T  R++     F           I+      I     L
Sbjct: 79  WDGLIAGLDVKRYDVVINEVAITDARKV--KYDFSAPYIVSKAVLIVRDDNRDIKRFEDL 136

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G        T+    LA  + A       +  +   E  A   + R +    D  +   
Sbjct: 137 KGRKSA-NTLTSNFGKLAQRYGA-----EIVPTQGFNESVALLESGRVETTINDSLSFLD 190

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            K    +    V   +    +     + +G+ E    +     A + A+
Sbjct: 191 FKKKQPKSRLKVAATEANGDAS-GVLLRKGNPELKAAIDKAL-AGIKAD 237


>gi|256026532|ref|ZP_05440366.1| amino acid-binding protein [Fusobacterium sp. D11]
 gi|289764543|ref|ZP_06523921.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Fusobacterium sp. D11]
 gi|289716098|gb|EFD80110.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Fusobacterium sp. D11]
          Length = 250

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 84/256 (32%), Gaps = 28/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L L  L F +                L  G N     +  +  N    GFD
Sbjct: 1   MKKIITILMLILSALSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L   +  +   I++  ++      ALQ K+ID +      T  RE ++  +   
Sbjct: 46  IELMELLGKKLGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + +  G   I++ K        L G +I VQ G+  E    D          P ++    
Sbjct: 103 VFFEGGHDVIVNNKSSFKKKEDLKGKTIGVQLGSIQEQFAKD------NGSIPKLYNNFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239
           E     +  + DA      +      T         +  I  K P A  A  + D++   
Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADSKLAK 213

Query: 240 IVSWTHYAMVTAEELG 255
             S     + ++ E  
Sbjct: 214 EFSNAILELKSSPEYA 229


>gi|209517853|ref|ZP_03266687.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
 gi|209501686|gb|EEA01708.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
          Length = 257

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 13/225 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F     +G   GFD+D    +   +    +K  ++  +      
Sbjct: 20  KDWSTVRFGVDASYAPFESKATDGKLVGFDIDLGNEICKRVG---AKCVWVEQDFDSMIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           AL++K+ D +  +   T  R   +   F    +      +  K  GI   +  L G ++ 
Sbjct: 77  ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPSADSLKGKTVG 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y++        + ++  + +     + R DA   D        L   
Sbjct: 135 VEQGTIQETYAKTYWEPKG--VKVVPYQNQDLVYTDLLSGRLDAALQDAVQADQGFLKTP 192

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
           R +    +   I    +        + + D +    V      M+
Sbjct: 193 RGTGFAFVGKDIDDPKILGNGAGIGMRKEDADLKTKVDKAIADMI 237


>gi|317153462|ref|YP_004121510.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943713|gb|ADU62764.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 280

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 15/232 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +      S +  I KRG ++ G +T    +A    +G++ GF+++  + L+  +  + 
Sbjct: 31  ATSKTQDQTSQIESILKRGAIRVGFDT-FKPWAMKDKDGNYIGFEIEVAQRLAKDMGVE- 88

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++P        AL + + DI+      T  R  +L + F     F G   +     
Sbjct: 89  --IEFVPTKWSGIIPALLTDKFDIIIGGMSVTPAR--NLKVNFSIPYEFSGMSIVASSAL 144

Query: 136 ----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                          +I V+ GTT      ++    N     + F+   +        R 
Sbjct: 145 AGGRTTLDQFNTPDTTISVRLGTTAAEAAKNFLPKAN----ILFFDEESQTIQELLNERV 200

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A          L         ++ L    S  P+A A+ +GD ++ N +  
Sbjct: 201 HALVASSPLPGNLAAEYADKL-YLPLSGDFSSEPIAFAVRKGDQDFLNWLDN 251


>gi|212716937|ref|ZP_03325065.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660222|gb|EEB20797.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM
           16992]
          Length = 517

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 14/260 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              V++  L+    ++ +        +K +     G +T    F     NG   G D++ 
Sbjct: 25  TLIVTVSALVASPVSANAAEVGDPSAVKGK-TYAVGTDTTFAPFEYR-ENGKMTGIDMEL 82

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA++     +  K+    L       AL S Q+D++      T  R+ +    F    +
Sbjct: 83  IRAIAQE---EGFKVTIQSLGFNAALQALSSNQVDVVIAGMSITDERKAT--YDFSNPYF 137

Query: 124 FDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             G    I      I+S   L G ++  + G+  E     +   +         ++   +
Sbjct: 138 QSGIQMAIAENNDSITSYKDLDGKTVVAKTGSEGESYAKQHASEYGY--TVTSVDQSSTM 195

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-EWYNIV 241
               ++   DA   D   L             ++ P +        A+ +G   +    +
Sbjct: 196 YEMVKSGNADAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGKNADLLAAI 252

Query: 242 SWTHYAMVTAEELGITQKNI 261
                 ++ + E        
Sbjct: 253 DDGLNKLIASGEYETIVAQY 272


>gi|284052353|ref|ZP_06382563.1| solute-binding family protein 3 [Arthrospira platensis str. Paraca]
          Length = 282

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 87/253 (34%), Gaps = 22/253 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--- 71
           + FT  +   ++L  I + G L+ G+ T  V F+ +  NGD +G+ VD  R +   +   
Sbjct: 16  VGFTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGYSVDLIRLIHGRLEEK 75

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
            + P +++   +  ++RF  +Q   +D++   T  T  RE   G+ F    +  G   ++
Sbjct: 76  LNQPIRLEMTTVTLQDRFDQVQQGNLDLVCEATSITAERE--NGVDFSTPFFVTGIQMLV 133

Query: 132 HKKKGIS-----------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +               S   L   +I     TTT+  L   +     +          
Sbjct: 134 KTENSDRLDPTQLSETDISTVSLERVTIGFLESTTTDSELRPVYPEAQWE----AVPSRA 189

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWY 238
           E     +         D   L      +    E+  L     ++       +     EW 
Sbjct: 190 EGIRLLQEGELQGIVSDGILLLGQLWKDGGTRENFQLVPSQPLTFENYGCILPMNSREWS 249

Query: 239 NIVSWTHYAMVTA 251
            +V+ T  +    
Sbjct: 250 RVVNSTIASPENT 262


>gi|76819583|ref|YP_336963.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei 1710b]
 gi|251767014|ref|ZP_02265673.2| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei PRL-20]
 gi|254189431|ref|ZP_04895941.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254195435|ref|ZP_04901863.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei S13]
 gi|254200953|ref|ZP_04907318.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei FMH]
 gi|254204916|ref|ZP_04911269.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei JHU]
 gi|254299489|ref|ZP_04966938.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 406e]
 gi|76584056|gb|ABA53530.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei 1710b]
 gi|147748565|gb|EDK55640.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei FMH]
 gi|147754502|gb|EDK61566.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei JHU]
 gi|157809307|gb|EDO86477.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 406e]
 gi|157937109|gb|EDO92779.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|169652182|gb|EDS84875.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei S13]
 gi|243064154|gb|EES46340.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei PRL-20]
          Length = 262

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 77/223 (34%), Gaps = 13/223 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K    ++ G++     F     +G   GFDVD    +   +    +K  ++  +    
Sbjct: 23  QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147
             AL++++ D +  +   T  RE  +   F    +      +  K   +  +   L G +
Sbjct: 80  IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V+ GT  E     ++    +K  P  ++  +++ A   A R DA   D        L 
Sbjct: 138 VGVEQGTIQETYAKVHWAPMGVKVQP--YQNQDQVYADLIAGRLDAALQDAVQADIGFLK 195

Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
             R  ++      ++            + + DT+    +    
Sbjct: 196 TPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 238


>gi|108803350|ref|YP_643287.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108764593|gb|ABG03475.1| extracellular solute-binding protein, family 3 [Rubrobacter
           xylanophilus DSM 9941]
          Length = 281

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 79/281 (28%), Gaps = 62/281 (22%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +    +     F     NG+  GFD+D  R +       P    +  +        L S
Sbjct: 56  TITVASDIAYRPFEFY-RNGEPVGFDIDLMREIGRRAGFTPE---FQNVTFDGIIPGLGS 111

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D        T  R     + F    +   Q  ++     I SV  L  A++ VQ GT
Sbjct: 112 NLYDAAISAITITEER--RQQVDFSEPYFNADQSLLVRSDSDIRSVDDLGQATVGVQIGT 169

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T     A+ F+          F+ +E+   A    + DA   D+        T+D     
Sbjct: 170 TG-ANKANQFQQQGRIAEVRTFDTIEDAFTALENGQVDAVINDLPVSQDKANTSD--GRL 226

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            ++  I +      A  +G                                       V 
Sbjct: 227 EVVQVIPTGEQYGIAFPKG---------------------------------SNLVGPVN 253

Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           R L                    R I+  G Y E++++ +G
Sbjct: 254 RAL--------------------REIKRDGTYAEIYEKWIG 274


>gi|57867284|ref|YP_188964.1| amino acid ABC transporter, permease/amino acid-binding protein,
           putative [Staphylococcus epidermidis RP62A]
 gi|251811199|ref|ZP_04825672.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875757|ref|ZP_06284624.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|57637942|gb|AAW54730.1| amino acid ABC transporter, permease/amino acid-binding protein,
           putative [Staphylococcus epidermidis RP62A]
 gi|251805280|gb|EES57937.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294782|gb|EFA87309.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|329734283|gb|EGG70598.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU045]
 gi|329737224|gb|EGG73478.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU028]
          Length = 485

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 76/251 (30%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M     + +    +    S   N       IK RG L+ G++           +    ++
Sbjct: 7   MLSIIIIMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  + ++     +  K++ + +       AL++ +IDI+      T  R+    +
Sbjct: 67  AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F           ++ K       ++    G  I  Q GT  E       +         
Sbjct: 122 DFTKPYMITNNVMMIKKDDAKRYQNIKDFEGKKIAAQKGTDQEKIAQTEIE----DSKIS 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              R+ E   + ++ +      +     A    N        +     K     A+ +  
Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNS 236

Query: 235 TEWYNIVSWTH 245
               + ++ T 
Sbjct: 237 PVLLDKLNQTI 247


>gi|18313715|ref|NP_560382.1| solute-binding family 3 protein [Pyrobaculum aerophilum str. IM2]
 gi|18161269|gb|AAL64564.1| bacterial extracellular solute-binding proteins, family 3
           [Pyrobaculum aerophilum str. IM2]
          Length = 267

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 75/230 (32%), Gaps = 12/230 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  IKKRG L  G +     +  V   G   G D+D  + ++ ++     +++   +  
Sbjct: 37  SLDAIKKRGVLVLGTSADWPPYEYV-EGGAVVGIDIDIAKKIAQSLG---VRLEVRDMKF 92

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                A++   +DI+  +   T  RE    + F      D    I  +   I +V  L G
Sbjct: 93  SALIEAVRRGDVDIVLADMAITPDREK--QVLFSIPYQVDSSVVIAKRGARIQNVEDLKG 150

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ VQ GT  E          N        +    +  A R    DA         AL 
Sbjct: 151 KAVGVQVGTVQEDWAVKNLG--NFSKIIRYDKVYPYMVEALRKGDLDAIIVGGVVGKALV 208

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                    + +    S    A A+     +    V    Y M+   E+ 
Sbjct: 209 KRFPEFEIVMSIGVRYS----AAAMPLCAQDLKIQVDRVIYDMLQTGEME 254


>gi|229823498|ref|ZP_04449567.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271]
 gi|229786942|gb|EEP23056.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271]
          Length = 470

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 75/236 (31%), Gaps = 19/236 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++  + L   S          +K         +T    F    ++G++ G D
Sbjct: 4   MIKRLMLVLVVFLGLQVPS----------VKAAEHYVIATDTTFAPFEFQDSSGNYVGID 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++ A   +    +  PL       AL+S Q+D        T  R+      F  
Sbjct: 54  MDLLAAIAEA---EGFTYEIKPLGFAAAVQALESDQVDGAIAGMTITDARKA--SFDFSD 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G  F +     I+ +  L G  I V+ GT             +  +  + F+   
Sbjct: 109 NYYESGLQFAVAADSKITDLEGLRGKKIAVKTGTAGADLANKL--KDDYNFTVVTFKDSA 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +         DA   D   +       +      ++ + +  S    A+ +G   
Sbjct: 167 NMYEDVLTGNSDATIEDAPVIA--YAIKNGNLRLKLIGEKLETSQTGFAVKKGKNA 220


>gi|73537534|ref|YP_297901.1| glutamine ABC transporter periplasmic protein [Ralstonia eutropha
           JMP134]
 gi|72120871|gb|AAZ63057.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 248

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 20/235 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +    +     + + +A           L   ++T  V F   + +  + GFD
Sbjct: 1   MKLFAKFASAVCLAASLVAHAAHAE---------QLLVAVDTAFVPFEFKQGD-KYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +  D    +  P++      ALQ++ +D+           +    + F  
Sbjct: 51  IDLWDAIARDLKLDY---KLQPMDFNGILPALQTRNVDVALAGITI--KEDRKKVIDFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G   ++     I   ++L G S+ ++ GT+     ADY K++       +F  ++
Sbjct: 106 GYYDSGFMLMVPSSSTIKGPNELKGKSLALKTGTSA----ADYAKSNFAGTDLRLFPNID 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                 R  R DA   D   +     T  +     + P  +          +G  
Sbjct: 162 NAYLELRTGRVDAAMHDTPNVLYYIHTAGKGQVKAVGPQ-MMAQKYGIGFPKGSP 215


>gi|298369021|ref|ZP_06980339.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283024|gb|EFI24511.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria sp. oral taxon 014 str. F0314]
          Length = 274

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVG 46
           M K F +  +  ++L        ++              ++  I  +G +  G       
Sbjct: 1   MLKKFVLGGMTALVLAACGGEGGSASSSAPAQSASASGSLIERINNKGTITVGTEGTYAP 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F     +G   G+DV+  RA++  +      +++           L++ + D+++     
Sbjct: 61  FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T   E            + G   +      I S+  + G        +          KA
Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  + + +        R DA   D  A+      N  
Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214


>gi|326439678|ref|ZP_08214412.1| ABC transporter substrate-binding protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 283

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 17/246 (6%)

Query: 7   VSILCLIILFFTSFS---TNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++     +L  T+       A+    +    +G L    +     F   + +G+  GFDV
Sbjct: 19  LAAAVTGVLITTACGTGDQGATTADGVPLVAKGKLTTCTHLPYPPFQF-ERDGEVVGFDV 77

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
                ++  +      I   P    +    L S + D+ +     T  R+    + F   
Sbjct: 78  ALIDRVAKDLGVRQE-ILDTPFENFKTGAFLNSGECDLAAAGMTITEERKK--NVDFSVP 134

Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +   Q  +     GI S++++      +  Q+GTT E  + +        + P+ FE  
Sbjct: 135 YFDATQALLATAGSGIRSLAEVEAEKRKLGAQSGTTGESHVQEQ------GFDPVAFESS 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + +    R  + DA   D   +              +   I +      ++ +G+     
Sbjct: 189 DAVLNGLRTGQVDAVVIDYPVVQGWLKDPANARAFRLGQSIETGEQYGFSVKKGNDALRA 248

Query: 240 IVSWTH 245
            +    
Sbjct: 249 AIDKVI 254


>gi|313894100|ref|ZP_07827666.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441664|gb|EFR60090.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Veillonella sp. oral taxon 158 str. F0412]
          Length = 260

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 17/252 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++++ +  +   +   N       ++ G L+ G  T    F   +    + GFDV
Sbjct: 5   KKLTAIALVAVAAMGLLAGCGNEK-PKMTQQEGVLRVGSETTFPPFEFTEGE-KYVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+S  I     K+++  +       A+QS  ID+++   + T  RE    L F  +
Sbjct: 63  DLSEAISKKIG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKV--LDFSDV 117

Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +      I ++ +L+G ++  Q GT                      +  
Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVEMAQKI-----PGTTVKQIDSN 172

Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             I    +A   D A   +  A+Y LK   D+  + V  P     + L   + +G+    
Sbjct: 173 ANIFMELKAGTIDGAILDNAVAMYYLKQGADQDLKLVGEPTKSPGTVLG--VKKGNKALQ 230

Query: 239 NIVSWTHYAMVT 250
           + V+     +  
Sbjct: 231 DAVNKALKELKE 242


>gi|328470612|gb|EGF41523.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           parahaemolyticus 10329]
          Length = 272

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L L I   T    +     +  IK+RG L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKATITALLGLAIAMPTIAKEDVPTPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L+        K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F       G     +K+        S        I  + G  T     + F        
Sbjct: 115 LFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F+   +           A            + +      +   + +SK   A A+  
Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVRL 229

Query: 233 GDTEWYNIVSW 243
           G+ +     + 
Sbjct: 230 GEEDKKAFFNK 240


>gi|260494601|ref|ZP_05814731.1| amino acid-binding protein [Fusobacterium sp. 3_1_33]
 gi|260197763|gb|EEW95280.1| amino acid-binding protein [Fusobacterium sp. 3_1_33]
          Length = 250

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 28/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L L  L F +                L  G N     +  +  N    GFD
Sbjct: 1   MKKIITILMLILSALSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L   +  +   I++  ++      ALQ K+ID +      T  RE ++  +   
Sbjct: 46  IELMELLGKKLGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + +  G   I++ K        L G ++ VQ G+  E    D          P ++    
Sbjct: 103 VFFEGGHDVIVNNKSSFKKKEDLKGKTVGVQLGSIQEQFAKD------NGSIPKLYNNFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239
           E     +  + DA      +      T         +  I  K P A  A  + D++   
Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADSKLAK 213

Query: 240 IVSWTHYAMVTAEELG 255
             S     + ++ E  
Sbjct: 214 EFSNAILELKSSPEYA 229


>gi|50914391|ref|YP_060363.1| glutamine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
 gi|50903465|gb|AAT87180.1| Glutamine-binding protein [Streptococcus pyogenes MGAS10394]
          Length = 724

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANTIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT++   L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|15674823|ref|NP_268997.1| putative ABC transporter substrate-binding protein [Streptococcus
           pyogenes M1 GAS]
 gi|71910409|ref|YP_281959.1| arginine-binding protein [Streptococcus pyogenes MGAS5005]
 gi|13621955|gb|AAK33718.1| putative ABC transporter (substrate-binding protein) [Streptococcus
           pyogenes M1 GAS]
 gi|71853191|gb|AAZ51214.1| arginine-binding protein [Streptococcus pyogenes MGAS5005]
          Length = 270

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      L  ++L+  +    +  L     IKK   L   ++     F     V     
Sbjct: 3   FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +  D   ++  P++      +LQ+ + D+       T  R     
Sbjct: 63  IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      +M       +  +S L+G  +  Q G+  E  +       N     
Sbjct: 118 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     +A +  A T +          +   +              A A+ + 
Sbjct: 174 ISLTAMGEAINELKAGQVYAVTLEAPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 233

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             +    V+     +   E   
Sbjct: 234 SGDLTKAVNKVIAKLDEQERYK 255


>gi|323144229|ref|ZP_08078861.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
 gi|322416004|gb|EFY06706.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
          Length = 256

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 76/236 (32%), Gaps = 16/236 (6%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67
           ILC I    T  S  A     I     ++ G       F  +     +  GFD++  +A+
Sbjct: 13  ILCGIAALCTVLSVQAE--DKI-----MRVGAEPAYAPFEFIDEETKELTGFDIELIKAI 65

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +     +  +I+   +       AL +  +D++      T  R+  +  +          
Sbjct: 66  AE---VEGYEIEISTMPFDALIPALLTNNVDVILSAITITEERKKRVAFSVPYYDSGLTI 122

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                 K  + SV  L G  ICVQ GTT     +   K          F    E     +
Sbjct: 123 LINEKDKDKVKSVKDLEGQKICVQIGTTGANYASTQIK----DAVVSQFNTAPESYLELK 178

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A  C A   D         TN      + LP  +S      A+ + D +    V+ 
Sbjct: 179 AGGCVAAINDRPVNDYYLATNK-SEGIISLPGTLSSESYGIAMRKTDEDMVKAVND 233


>gi|239637861|ref|ZP_04678822.1| glutamine-binding periplasmic protein [Staphylococcus warneri
           L37603]
 gi|239596424|gb|EEQ78960.1| glutamine-binding periplasmic protein [Staphylococcus warneri
           L37603]
          Length = 486

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 82/259 (31%), Gaps = 23/259 (8%)

Query: 1   MY---KDFFVSILCLIILFFT----SFSTNASI-LGDIKKRGFLKCGINTGLVGFAE-VK 51
           M    K F V ++ +     T      +         IK  G L+ G++           
Sbjct: 1   MKYFIKVFLVFLIIVGSTLTTKQPNINAEEKDTNWQKIKDSGELRVGLSADYAPMEFEKN 60

Query: 52  ANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           ANG   + G D++  + ++     +  K++ + +       AL++ +IDI+      T  
Sbjct: 61  ANGKTEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTTTPE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           RE    ++F           ++ K     + S+S      I VQ GT  E       +  
Sbjct: 118 REK--EVSFTKPYMMTNNIMLVKKNEKNHLKSISDFKDKKIAVQKGTDQEKIAKTEIE-- 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                     ++ E   + ++ +      +     A    N        +     K P  
Sbjct: 174 --NADVTSLNKLPETILSVKSGKAVGAILEKPVAEAYIKQNPE-LAFSDVKFNEEKKPTC 230

Query: 228 PAIIQGDTEWYNIVSWTHY 246
            A+ +        ++ T  
Sbjct: 231 IAVPKNSPILLKKLNQTSN 249


>gi|221214276|ref|ZP_03587248.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
 gi|221165931|gb|EED98405.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
          Length = 262

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 24/253 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M       ++I     L   +   +A           L+ G+      F     NG+ +G
Sbjct: 1   MKPTHSLKLAIALACALGSAAAVADAQT---------LRFGLEAQYPPFESKAPNGELQG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+           +++  +      AL+ ++ D ++   + T  R     + F
Sbjct: 52  FDIDVGNAVCQ---TAKLTCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDF 106

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             I Y      I     G + +   L G  + V   +  E     +++   +    + ++
Sbjct: 107 TTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVA--IVAYQ 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQ 232
              +  A   A R DA      A     L+         +   +         +A  + +
Sbjct: 165 DQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRK 224

Query: 233 GDTEWYNIVSWTH 245
           GD      +    
Sbjct: 225 GDDALKAKLDAAI 237


>gi|94994077|ref|YP_602175.1| Arginine-binding protein [Streptococcus pyogenes MGAS10750]
 gi|139474036|ref|YP_001128752.1| extracellular solute-binding protein [Streptococcus pyogenes str.
           Manfredo]
 gi|94547585|gb|ABF37631.1| Arginine-binding protein [Streptococcus pyogenes MGAS10750]
 gi|134272283|emb|CAM30536.1| extracellular solute-binding protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 270

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      L  ++L+  +    +  L     IKK   L   ++     F     V     
Sbjct: 3   FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +  D   ++  P++      +LQ+ + D+       T  R     
Sbjct: 63  IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      +M       +  +S LSG  +  Q G+  E  +       N     
Sbjct: 118 YDFSIPYYQAENAIVMRASDAKVTKNISDLSGKKVAAQKGSIEEGLVKIQLPKAN----L 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     +A +  A T +          +   +              A A+ + 
Sbjct: 174 ISLTAMGEAINELKAGQVYAVTLETPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 233

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             +    V+     +   E   
Sbjct: 234 SGDLTKAVNKVIAKLDEQERYK 255


>gi|148653871|ref|YP_001280964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
 gi|148572955|gb|ABQ95014.1| extracellular solute-binding protein, family 3 [Psychrobacter sp.
           PRwf-1]
          Length = 277

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 73/219 (33%), Gaps = 13/219 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           ++  L+         F    A G+ +GFDVD   AL   +       +    + +     
Sbjct: 53  EQKVLRIATEGAYAPFNYTDAEGNLQGFDVDIANALCEQM---KVSCEIQAQDWEGIIPG 109

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--QLSGASIC 149
           L++K+ D +      T  R  S  + F    + +   FI  K           ++ + I 
Sbjct: 110 LKAKKYDAIVAAMSVTPER--SQQVDFTDPYFTNALVFITSKDSTFDPSHSDNITSSKIA 167

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            Q  T +   L   +   NM+    +++ +        ++R DA   D        L+ +
Sbjct: 168 AQRSTISSQWLESTYPKANMQ----LYDTLNNAFLDLESNRVDAMISDK-LPAIEWLSKN 222

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                V   DI      A A+ +        ++    A+
Sbjct: 223 NSQFEVKGADIEIDDNFAIAVRK-QDALKEQLNEALAAI 260


>gi|53717301|ref|YP_106091.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|53721304|ref|YP_110289.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei K96243]
 gi|124382176|ref|YP_001025903.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126445539|ref|YP_001061480.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 668]
 gi|126447410|ref|YP_001077991.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|126458568|ref|YP_001074419.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106a]
 gi|134280651|ref|ZP_01767361.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Burkholderia pseudomallei 305]
 gi|167722270|ref|ZP_02405506.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei DM98]
 gi|167741269|ref|ZP_02414043.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei 14]
 gi|167818443|ref|ZP_02450123.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei 91]
 gi|167848345|ref|ZP_02473853.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei B7210]
 gi|167896896|ref|ZP_02484298.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei 7894]
 gi|167905279|ref|ZP_02492484.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei NCTC 13177]
 gi|167913583|ref|ZP_02500674.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei 112]
 gi|217423019|ref|ZP_03454521.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 576]
 gi|226194751|ref|ZP_03790343.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237507303|ref|ZP_04520018.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei MSHR346]
 gi|238562560|ref|ZP_00440185.2| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei GB8 horse 4]
 gi|242311579|ref|ZP_04810596.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106b]
 gi|254262968|ref|ZP_04953833.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1710a]
 gi|254359037|ref|ZP_04975309.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei 2002721280]
 gi|52211718|emb|CAH37716.1| lysine-arginine-ornithine transport system, binding exported
           protein [Burkholderia pseudomallei K96243]
 gi|52423271|gb|AAU46841.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|126225030|gb|ABN88535.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 668]
 gi|126232336|gb|ABN95749.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106a]
 gi|126240264|gb|ABO03376.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|134247673|gb|EBA47757.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Burkholderia pseudomallei 305]
 gi|148028224|gb|EDK86184.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei 2002721280]
 gi|217393927|gb|EEC33947.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 576]
 gi|225933095|gb|EEH29090.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|234999508|gb|EEP48932.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei MSHR346]
 gi|238522334|gb|EEP85779.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia mallei GB8 horse 4]
 gi|242134818|gb|EES21221.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106b]
 gi|254213970|gb|EET03355.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1710a]
 gi|261826687|gb|ABN00457.2| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10229]
          Length = 260

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 77/223 (34%), Gaps = 13/223 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K    ++ G++     F     +G   GFDVD    +   +    +K  ++  +    
Sbjct: 21  QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 77

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147
             AL++++ D +  +   T  RE  +   F    +      +  K   +  +   L G +
Sbjct: 78  IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 135

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V+ GT  E     ++    +K  P  ++  +++ A   A R DA   D        L 
Sbjct: 136 VGVEQGTIQETYAKVHWAPMGVKVQP--YQNQDQVYADLIAGRLDAALQDAVQADIGFLK 193

Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
             R  ++      ++            + + DT+    +    
Sbjct: 194 TPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 236


>gi|257887162|ref|ZP_05666815.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257898269|ref|ZP_05677922.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|257823216|gb|EEV50148.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257836181|gb|EEV61255.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 535

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%)

Query: 1   MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44
           M +      F   +  L+ L F          T+ S+ +  +  I+ K+       ++  
Sbjct: 36  MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F    ANG+++G DV    +++         I+           AL+S Q D +    
Sbjct: 96  APFEFQNANGEYEGIDVKLMESIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T  R+      F    +  G    + K    I S   L G ++  + GT +   L+D+
Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
              +        F+  +++    +    DA   D   +        +  E     +  S 
Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 265

Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
              A A+ +  + E  N+ +     +    E  
Sbjct: 266 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298


>gi|283768559|ref|ZP_06341471.1| bacterial extracellular solute-binding protein, family 3 [Bulleidia
           extructa W1219]
 gi|283104951|gb|EFC06323.1| bacterial extracellular solute-binding protein, family 3 [Bulleidia
           extructa W1219]
          Length = 263

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 66/246 (26%), Gaps = 13/246 (5%)

Query: 3   KDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K    +IL L ++   + +       L  +KK G LK G+      F+   +     G+D
Sbjct: 6   KVVMSAILALGLVACGTKTNEKAEDSLQKVKKAGVLKIGLEGNWKPFSYHDSKDKLVGYD 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  + ++  +                    L +   DI+    D T  R+ +  ++   
Sbjct: 66  TEVAQHIAKKLGVKAE---IKEAAWDGLLTGLSTGVYDIVVNGVDVTKERQKAFDMSDAY 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      I S   L         G+T          A            + 
Sbjct: 123 AYDRIDL-VVKEGNTNIKSFEDLKSKKSANSTGSTYATI------AEKYGATVSNVPTLA 175

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E          DA     +++     T       V+          A  + +G+      
Sbjct: 176 ETMQLVLNGTVDATINADTSVSDYLNTTGEKKLKVVAQLPDITE-YAIPMKKGNDSLKKA 234

Query: 241 VSWTHY 246
           V+    
Sbjct: 235 VNQALK 240


>gi|329724901|gb|EGG61404.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU144]
          Length = 487

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 76/251 (30%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M     + +    +    S   N       IK RG L+ G++           +    ++
Sbjct: 7   MLSIIILMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  + ++     +  K++ + +       AL++ +IDI+      T  R+    +
Sbjct: 67  AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F           ++ K       ++    G  I  Q GT  E       +         
Sbjct: 122 DFTKPYMITNNVMMIKKDDAKRYQNIKDFEGKKIAAQKGTDQEKIAQTEIE----NSKIS 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              R+ E   + ++ +      +     A    N        +     K     A+ +  
Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNS 236

Query: 235 TEWYNIVSWTH 245
               + ++ T 
Sbjct: 237 PVLLDKLNQTI 247


>gi|325277397|ref|ZP_08143017.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
 gi|324097470|gb|EGB95696.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
          Length = 261

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 87/260 (33%), Gaps = 11/260 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +    L      +    A  L DI  RG LK  +      F  V  +   +G 
Sbjct: 1   MKNIRSLLLATLLCGGALGAAQAQADALADITARGVLKVAVPQDFPPFGSVGPDLKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  + L+  +      +   P+N+  R   L + ++D++  +      RE    + F 
Sbjct: 61  DIDTAQLLADKLGVK---LALTPVNSTNRIPFLTTGKVDLVISSLGKNAEREAV--IDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                        ++  IS +  ++G +I V  G+  ++ L               FE  
Sbjct: 116 RPYAPFYLAVFGPEQTSISDIGAIAGKTISVTRGSIEDMELTAVAPK---GAVIKRFEDN 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
               AAY + + +        +  +      P++  ++   +  SP+   + + +     
Sbjct: 173 NSTIAAYLSGQVELIASGSVVMAVIA--EKNPAKVPVMKVKLKDSPVYVGLAKQEPALLA 230

Query: 240 IVSWTHYAMVTAEELGITQK 259
            V+ T  A      L    +
Sbjct: 231 KVNATLDAAKADGSLNRNAE 250


>gi|209516828|ref|ZP_03265679.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209502791|gb|EEA02796.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 260

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 21/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        + L+ +   S           K    ++ G++     F    A+G   GFD
Sbjct: 1   MKTMLATLTIALLAVSSVSAIA--------KDWSTVRFGVDASYPPFESKAADGKLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +    +K  ++  +      AL+ ++ D +      T  R+  +   F  
Sbjct: 53  IDLGNEICRRL---DAKCVWIENSFDGMIPALKGRKFDGVLSTMSMTPARQAQIA--FSS 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   I  +   L G  I V+ G+  E     Y++        + ++  
Sbjct: 108 KVFRIPTRLVARKGAPIEPTPEALKGKRIGVEQGSIQETYAKTYWEPAG--AVVVPYQDQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
           + + A   A R DA   +        L   R  +     + +  +       A  + + D
Sbjct: 166 DLVYADLLAGRIDASLQNAVQADLGFLRTPRGKDFAFAGNPLYDAKTLGSGTAIGLRKED 225

Query: 235 TEWYNIVSWTH 245
           T+    +    
Sbjct: 226 TDLQEKIDKAI 236


>gi|15890452|ref|NP_356124.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158682|gb|AAK88909.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 278

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 15/233 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T    +A  L + K  G +  GI      +  + ++G  +G+D D  R  +  +     
Sbjct: 25  LTPAGADARTLEEAKSSGKIVIGIQGDNAPWGFINSSGVQEGYDADLARGFADYLG---L 81

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K++++PL    R  +L++ ++D L  +   T  R     + +      +       K K 
Sbjct: 82  KVEFVPLAVANRIPSLRTGKVDALFASMGMTPERAK--NVQYAQPYAHNVMSVYATKDKK 139

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I++   L+G ++     +  +  L         K + + F+       A  + + +A  G
Sbjct: 140 IANFDDLTGMTVGAPKSSPMDTALTAGA---GTKANILRFDDDAATIQAILSGQIEAIGG 196

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           +    Y  +L      ++ +  D+++    + A   G+ +W    +    A +
Sbjct: 197 N--QFYGDRLAAAGGKDYEVKFDLVTL-YNSAATRPGEKDW----NEALNAWL 242


>gi|242243079|ref|ZP_04797524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|242233427|gb|EES35739.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
          Length = 485

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M     + +    +   +S   N       IK RG L+ G++           +    ++
Sbjct: 7   MLSIIILMLSTFTLFISSSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  + ++     +  K++ + +       AL++ +IDI+      T  R+    +
Sbjct: 67  AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F           ++ K +     ++    G +I  Q GT  E       +         
Sbjct: 122 DFTKPYMITNNVMMIKKDEAKRYQNIKDFEGKNIAAQKGTDQEKIAQTEIE----DSKIS 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              R+ E   + ++ +      +     A    N              K     A+ +  
Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKTKFNEEKKQTCIAVPKNS 236

Query: 235 TEWYNIVSWTH 245
               + ++ T 
Sbjct: 237 PVLLDKLNQTI 247


>gi|317060250|ref|ZP_07924735.1| histidine-binding protein [Fusobacterium sp. D12]
 gi|313685926|gb|EFS22761.1| histidine-binding protein [Fusobacterium sp. D12]
          Length = 255

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 79/244 (32%), Gaps = 25/244 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  FV I CL+                 K+   L  G N     F  ++   + KGFD+
Sbjct: 18  KKRIFVVICCLLCFACG----------KGKEEATLVVGTNPEFAPFEYMEGE-EIKGFDI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +   I      ++   +N      ALQSK+ID++      T  R+    + F   
Sbjct: 67  ELMKQIGEKIGKK---VEIKSMNFDGLLPALQSKKIDVVIAGMTATEERKKH--VNFTKN 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y   Q  ++ K+     +  L G  I V  G T      D F +   +Y    F     
Sbjct: 122 YYISQQNIMV-KENKEHDLEALKGQKIGVVLGYTG-----DVFISSKHEYAVERFNSASA 175

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +A +  A   D     A +     P           K   A A+ + +      +
Sbjct: 176 AILALQADKVSAVILDEE--PAKQYVKQNPG-LSTFAISDGKEEYAIALHKDNVSLLKDI 232

Query: 242 SWTH 245
               
Sbjct: 233 DKAL 236


>gi|259502421|ref|ZP_05745323.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259169564|gb|EEW54059.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 502

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 89/271 (32%), Gaps = 36/271 (13%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI-------------------LGDIKKRGFLKCG 39
           M   K + + +  +  +     +  A                     L  IK++G L  G
Sbjct: 3   MKHLKHYLMLLTIIASIIIAPLTALADSGTASSATTSSTTSAATDDSLQKIKQKGVLVVG 62

Query: 40  INTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            + G   F          ++ GF++   R L+  +      ++   ++     +AL+S +
Sbjct: 63  TSAGYPPFEFTTKKDGKTEYVGFEMSLARQLAKDLGVK---LEIKNMDFDSLLVALESHK 119

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGT 154
           ID+     + T  RE    + F    +   + F++HK+      +     G ++  + G 
Sbjct: 120 IDVAIAGINITPEREK--SVDFSKTYHKGTKYFLIHKQDKDKYKNYMDFKGKTVGTENGA 177

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +  Y        H     +   +  A +AH+ D    D +   A    N      
Sbjct: 178 MEYAMIKKYIP----DVHEKGLSKWSSLVIALQAHKLDGVLMDSATAKAFAQNNPDLYAF 233

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                + S   +A A+ +G       V+ T 
Sbjct: 234 NSHMKVTSDG-VAVALPKGANSLKAAVNQTV 263


>gi|257462599|ref|ZP_05627009.1| extracellular solute-binding protein, family 3 [Fusobacterium sp.
           D12]
          Length = 241

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 79/244 (32%), Gaps = 25/244 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  FV I CL+                 K+   L  G N     F  ++   + KGFD+
Sbjct: 4   KKRIFVVICCLLCFACG----------KGKEEATLVVGTNPEFAPFEYMEGE-EIKGFDI 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +   I      ++   +N      ALQSK+ID++      T  R+    + F   
Sbjct: 53  ELMKQIGEKIGKK---VEIKSMNFDGLLPALQSKKIDVVIAGMTATEERKKH--VNFTKN 107

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y   Q  ++ K+     +  L G  I V  G T      D F +   +Y    F     
Sbjct: 108 YYISQQNIMV-KENKEHDLEALKGQKIGVVLGYTG-----DVFISSKHEYAVERFNSASA 161

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +A +  A   D     A +     P           K   A A+ + +      +
Sbjct: 162 AILALQADKVSAVILDEE--PAKQYVKQNPG-LSTFAISDGKEEYAIALHKDNVSLLKDI 218

Query: 242 SWTH 245
               
Sbjct: 219 DKAL 222


>gi|171319268|ref|ZP_02908383.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171095525|gb|EDT40490.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 259

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKSPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+   G+ F P  Y      + H+   +    + L G  + V  G
Sbjct: 83  RKFDAINSAMNITAKRK--QGIDFTPAIYVVPIVMVTHRGSPLRPDAASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + +   ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYADQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + +GD      +     A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKGDKALQTKIVGALDAL 238


>gi|15807148|ref|NP_295877.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
 gi|6459952|gb|AAF11702.1|AE002049_7 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Deinococcus radiodurans R1]
          Length = 305

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 76/225 (33%), Gaps = 14/225 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S  A    +IKK G +K         F  +K      GF+VD   AL   +     K+++
Sbjct: 71  SAEARTWAEIKKSGTIKVATEGAFPPFNLMKGK-QLTGFEVDLANALGKQLG---LKVEW 126

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                    + L   + D +  +   T  R+    + F    Y  G   +      + + 
Sbjct: 127 TVQPFDSLLIGLNQDRYDFVIASHGITPERQK--AVDFSDPHYCTGGAIVTRPGGPL-TA 183

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G S+ VQ GTT    +               F R  +  AA  A R DA+ GD   
Sbjct: 184 KALAGKSVAVQVGTTYLENVRKVPG----VGDVKTFPRDVDAQAALMAGRVDAWVGDRFT 239

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              L              D++ +   A A+ +G+      ++   
Sbjct: 240 GLDLVKAQKGKIVQ---GDLLFRERNAMAVKKGNVTLLKELNAAL 281


>gi|170738481|ref|YP_001767136.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168192755|gb|ACA14702.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 272

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 9/231 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S +  A  +  IK+RG L  G+      F     +G+  G + D    ++  +  +   +
Sbjct: 19  SGARAAEGVDAIKQRGKLIVGVKADYRPFGFRDPSGNIIGLEPDLAADIAKRLGVELELV 78

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
             +   +  R   LQ  ++D+L         R   +               +  K  GI+
Sbjct: 79  PVV---SSNRIEFLQQGKVDLLIATISDKPERRRVVQAIDPQYYSDYVNILLPKKG-GIT 134

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
              QL G  +C  +G      +A  + A       + F+  E+   A +   C  Y  D 
Sbjct: 135 EWGQLKGKPVCATSGAWYNKDVARTYGA-----EIVAFDGSEKPLFALKQGNCVGYLYDQ 189

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           + +      ++  +++ +    I ++P   A+  G+     ++       +
Sbjct: 190 TFIQGRLGEDEWKADYAMPLKGILEAPWIMAVASGNASLQAVMETATKDWM 240


>gi|91779877|ref|YP_555085.1| basic amino acid ABC transporter periplasmic protein [Burkholderia
           xenovorans LB400]
 gi|91692537|gb|ABE35735.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 255

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 19/246 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + +   +     +F+ +++          L+ GI+           +G +KGFDVD
Sbjct: 2   KISLMILSAALAFSSGAFAADSTT---------LRLGIDPTYPPMDSKAPDGSFKGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   I    ++ Q++ L       ALQ+++ID +  +   T  RE    + F    
Sbjct: 53  LGNEICKRI---HARCQWVELEFSGMIPALQARKIDAILSSMAITEKRE--QQILFSSKL 107

Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +      I  +   ++ S++ L+G +I VQ+GT  E      +       H + ++  EE
Sbjct: 108 FQFKSRLIARQGSALAGSLNALAGKAIGVQSGTQFEGYALKNWAPLG--VHVVAYKSQEE 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEWYN 239
           + A     R D             L          + +   +    +   + + +T    
Sbjct: 166 VFADLENGRLDGALLGSVEADYGFLRTPAGKGFAFVGEPLSMGDRGVGIGLRKDETAVQA 225

Query: 240 IVSWTH 245
            ++   
Sbjct: 226 SINEAI 231


>gi|319796471|ref|YP_004158111.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315598934|gb|ADU40000.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 257

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 14/232 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +F   A           L    +     FA    +    GFD+D   A++        
Sbjct: 19  SLTFGAQAQTPNR-----ELTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQ---QGL 70

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           KI+ +       F AL +  +D++         R+      F P  +   Q   + K   
Sbjct: 71  KIKVVNTPFTGIFGALNNGDVDLVISGVTINDKRK--QSYDFTPPYFAARQLIALPKNST 128

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           ++S+  L+G  I V + +T +   +  F       +   FE    I +       DA  G
Sbjct: 129 VASLKDLAGKKIAVVSASTADDIASREFGK--TSPNIRRFESTPLIISELAGGGVDAAMG 186

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           D   +      +              +      + +GD    + +S    A+
Sbjct: 187 DNGVIAYRVAQHADLKTLD--DKSFPEEGFGIVVKKGDKALLDKLSAGLAAI 236


>gi|224368640|ref|YP_002602803.1| ABC-type amino acid transporter, periplasmic amino acid-binding
           protein [Desulfobacterium autotrophicum HRM2]
 gi|223691356|gb|ACN14639.1| ABC-type amino acid transporter, periplasmic amino acid-binding
           protein [Desulfobacterium autotrophicum HRM2]
          Length = 267

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 96/260 (36%), Gaps = 14/260 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K      L  +I    S  + A+ L DI KRG L+  + +G   +A +  NGD  G 
Sbjct: 1   MKLKQMLTMALAFLIALSFSGLSFANNLTDIVKRGELRVAVQSGNPPYAFIDKNGDHTGS 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            ++F + ++ A+      + +   +      AL S + DIL+ +   TL R  SL + F 
Sbjct: 61  MIEFTKGMADAMGVKLKILDF---DWDGLIPALLSGKADILAADMTPTLKR--SLKITFT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +          K   ++  ++    ++ V  G+T E     Y     +K       
Sbjct: 116 DPWIYVQPCIFTRTDKAYQTLEDVNKSDVTVGVLLGSTGENIARTYLPNAKIKA---YKG 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDT 235
               I  A  A   DA   D  A+  +      P+   +L       K PLA A+     
Sbjct: 173 GGRMIVQALVAGHVDAGVNDDLAVLTVLSDFP-PNSVRLLDKRLGQGKDPLAFAVRHEAV 231

Query: 236 EWYNIVSWTHYAMVTAEELG 255
             +  ++     + ++ E  
Sbjct: 232 NLWQWINLYFQTIRSSGEYD 251


>gi|239833585|ref|ZP_04681913.1| periplasmic binding ABC transporter protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239821648|gb|EEQ93217.1| periplasmic binding ABC transporter protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 267

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 83/276 (30%), Gaps = 22/276 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M        + +        + +A           +K GI       F E  A G W G+
Sbjct: 8   MKCLLASLCVGVTFALAGVGAASAE---------QVKLGIAAEPYPPFTEPDATGKWHGW 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++DF  A+      D       P+       AL + +ID++  +   T  R  +  + F 
Sbjct: 59  EIDFADAVCKEAKLD---CVITPVAWDGIIPALTTGKIDMIVGSMSMTPERLKT--IDFS 113

Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  K      +   L   +I VQ  T  +     +F           ++ 
Sbjct: 114 DKYYNTPTIVIGTKDLKFDATPEGLKDKTIGVQVSTIHQAYAVKHFAPAG--ATIKEYQT 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            +E +    A R DA   D  AL     T N +               L P +  G  + 
Sbjct: 172 QDEANNDLTAGRIDAVQADSLALRTFLATDNGKACCEEKGTVAKDVEVLGPGVGIGLRKG 231

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
              +     A + A          +  +K   + D+
Sbjct: 232 DTELKDKLNAAIKA---IRANGTYDTFTKKYFDFDI 264


>gi|94990641|ref|YP_598741.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10270]
 gi|94544149|gb|ABF34197.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10270]
          Length = 724

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT++   L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|6706990|gb|AAF25531.1|AF104994_1 periplasmic binding protein [Streptomyces coelicolor A3(2)]
          Length = 321

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 81/255 (31%), Gaps = 20/255 (7%)

Query: 17  FTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDD 74
               +  A  L   I+ +G +K G +                 G D D   AL   +   
Sbjct: 49  SAGGAPLADKLPQSIRDKGTIKVGSDIAYAPVEFQGRTPAKTVGIDPDLADALGKQLGVK 108

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYF 124
               ++           L+SK+ DI       T  R+             G  F    + 
Sbjct: 109 ---FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDGDTGKKVGPGGDFVD-YFT 164

Query: 125 DGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVE 180
            G      K   +GI + S L G  + VQ GT +E       +      K     F+  +
Sbjct: 165 AGVSIYTKKGDDQGIKTWSDLCGKKLVVQRGTVSEDLAKAENEKCPAGKKISMQPFDNDQ 224

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +     RA   DA + D         T+    +  ++ + +  +P   A+ + +T+  + 
Sbjct: 225 QAQTRLRAGGADAGSSDFPVAAYAVKTSGGGKDFELVGEQVEAAPYGIAVAKDNTQLRDA 284

Query: 241 VSWTHYAMVTAEELG 255
           +     A++   E  
Sbjct: 285 LKAALDAVIANGEYK 299


>gi|282861063|ref|ZP_06270128.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
 gi|282563721|gb|EFB69258.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
          Length = 320

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 75/238 (31%), Gaps = 20/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              +K G +K G N        V  NG   G D D   AL   +       ++   +   
Sbjct: 61  EKYRKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDLADALGKQLGVK---FEFTSGSFDG 116

Query: 88  RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHKKKG-- 136
              AL + + DI   +      R+            G+ F    +  G      K     
Sbjct: 117 LITALNTGRHDIAMSSITDNKQRQEGLDDSGKKLGKGVDFVD-YFLAGTAVYTKKGNPEG 175

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCD 192
           I S+  L G    VQ GTT E  L    KA             FE   E     ++    
Sbjct: 176 IKSIEDLCGKVAAVQRGTTYEDALKKQSKACTDGGGKAVKIESFENDTEAQTRVKSGGAV 235

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A   D      L       ++  ++ + +   P   A+ + +TE  +++     A++ 
Sbjct: 236 AGVNDYPVAVDLARKAGGGNDFEVVGEQVDAGPFGIAVNKDNTELRDVLKEAVDAIIA 293


>gi|307306802|ref|ZP_07586543.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306902093|gb|EFN32691.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 294

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 87/264 (32%), Gaps = 21/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58
           M K     I  L +    + S NA+ L   +K  G +             V     + KG
Sbjct: 19  MNKH----IAALTVACLAATSANAAGLPERVKSAGKVVVANQPNYPPMEYVDPATNELKG 74

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D   AL+  +    + +++  +  ++   +LQ+ ++D++         R     L F
Sbjct: 75  VDIDLGVALAKELG---TTVEWSNIGFEQMISSLQTGRVDLIHSGMSDLPKR--RDTLDF 129

Query: 119 RPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-----MKY 171
                  G  F     +K    +++   G ++ +   T+     A +  A+         
Sbjct: 130 ID-YMKSGAQFYTSFARKDEFKTLTDFCGKTVGMSRRTSFPDETAKWSAANCEAKGLPAI 188

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +  A  +  R DA       L  L         + ++ +  +         
Sbjct: 189 KVVGTEGSADARAQLKQGRLDAAVQGSETLPYLMDLEKD--TYAVVGEPFTVVYQGIGFA 246

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + DTE  +  +     ++ + E  
Sbjct: 247 KKDTELRDAYAAALKGLMESGEYK 270


>gi|226941144|ref|YP_002796218.1| Glutamine transport system substrate-binding protein precursor
           [Laribacter hongkongensis HLHK9]
 gi|226716071|gb|ACO75209.1| Glutamine transport system substrate-binding protein precursor
           [Laribacter hongkongensis HLHK9]
          Length = 271

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 75/255 (29%), Gaps = 15/255 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDW 56
            ++  +S +   ++        A+                  G +     F       + 
Sbjct: 5   RRNLVLSAILSAVVLAGCGKKEAAPEAAAAAPEAPAVKEYVVGTDAAYAPFEYENDKKEV 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFD+D   A +        K++++    +  F +L +   DI+  +   T  R+    +
Sbjct: 65  EGFDIDVLSAAAEKGG---FKVKFINTPWEGIFASLGNGDRDIVVSSVTITDERK--QTM 119

Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    +   Q  ++ K     I   + L G  + VQ GTT +                 
Sbjct: 120 DFSEPYFEARQLIVVSKNDAAGIKKFADLKGKKVAVQTGTTGDEVTQKLLGK--SSPDIK 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233
            FE              DA   D   +      N       +   +  +      A+ +G
Sbjct: 178 RFESTPLALKELENGGVDAVVADNGVVVNYLSNNGDKGLVSVEDTESFAPEYYGIAVKKG 237

Query: 234 DTEWYNIVSWTHYAM 248
           +      ++    A+
Sbjct: 238 NQALQEQINKGLAAI 252


>gi|325129939|gb|EGC52739.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Neisseria meningitidis OX99.30304]
          Length = 250

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 58/198 (29%), Gaps = 10/198 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
                   + + S++  I  +G +  G       F     +G   G+DV+  RA++  + 
Sbjct: 3   ASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLG 62

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +++           L++ + D+++     T   E            + G   +  
Sbjct: 63  VK---VEFKETQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSDPYSWSGAVLVAR 118

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I S+  + G        +          KA       +  + + +        R D
Sbjct: 119 NDSNIKSIDDIKGVKTAQSLTSNYGE------KAKAAGADLVAVDGLAQSLTLIEQKRAD 172

Query: 193 AYTGDISALYALKLTNDR 210
           A   D  A+      N  
Sbjct: 173 ATLNDELAVLDYLKKNPN 190


>gi|21910533|ref|NP_664801.1| putative glutamine ABC transporter glutamine-binding
           protein/permease protein [Streptococcus pyogenes
           MGAS315]
 gi|28895773|ref|NP_802123.1| hypothetical protein SPs0861 [Streptococcus pyogenes SSI-1]
 gi|21904733|gb|AAM79604.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pyogenes
           MGAS315]
 gi|28811022|dbj|BAC63956.1| hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 724

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYN 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT++   L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|327191524|gb|EGE58539.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CNPAF512]
          Length = 268

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 83/266 (31%), Gaps = 19/266 (7%)

Query: 1   MYKDFFVSIL---CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +    ++L    +        +  + +    ++R  ++  +      F  + AN   +
Sbjct: 1   MLRISIQTLLRGALMAGGLGVVLAAVSPLPVAAQERMPMRVAVEGAFPPFNYLDANNKLQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   AL         + Q++     +    L +++ D +  +   +L R     +A
Sbjct: 61  GFDIDIANALCE---TGKFECQFIIEKWDDMIPDLVAEKYDAIISSMSMSLER--RQKVA 115

Query: 118 FRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y     FI  K   I+  S + L+G  + V + T  E     ++          V
Sbjct: 116 FTEKYYNSPSVFIARKDSPITDVSPAALNGKKLGVTSSTAQESYANHFYP----DMKKTV 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAI 230
           F    E+       R D    D  A+Y         +         +           A+
Sbjct: 172 FRSSPELYKGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFGEGAGIAV 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGI 256
              D E    ++     +       +
Sbjct: 232 RLDDKERLARLNEALKTIKEDGTYDM 257


>gi|300714866|ref|YP_003739669.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299060702|emb|CAX57809.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 264

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 83/250 (33%), Gaps = 22/250 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
            L L  L     S        I   G L+   +     F     NG   GF++D   A+ 
Sbjct: 7   ALMLATLALCCSSA-------IAAEGTLRVAADLAYPPFQYRDVNGKPAGFEIDITNAVC 59

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
            AI     K  Y+  +      +L +K++D +      T+ R+    + F    Y     
Sbjct: 60  KAI---AVKCDYVVSSFDAEIPSLMAKKVDFI-SPLGATIKRKK--SIDFSDFIYHVPSQ 113

Query: 129 FIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +  K   +  +   L G SI VQ G+  E+    Y+  H        +   + I     
Sbjct: 114 LVARKGTNLQPTAESLQGKSIAVQQGSIQEMYANKYWAPHG--VEIKTYPDQDVIYQDLA 171

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVS 242
           A R D       A+    L      +  +    +    L     A  + +GD +   +++
Sbjct: 172 AGRLDGALSPAVAITFGFLHKPEGKDFALSGPEVRDDLLYSIGSAYGVRKGDEKTQQMLN 231

Query: 243 WTHYAMVTAE 252
               A + A+
Sbjct: 232 QGL-AKIMAD 240


>gi|296126897|ref|YP_003634149.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
 gi|296018713|gb|ADG71950.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
          Length = 247

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 88/248 (35%), Gaps = 21/248 (8%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K+  F  I+ L I+               + +  L  G N     F   + +    GF
Sbjct: 1   MFKNNLFKIIIALSIVLTVFIGCQ-----KKEDKNKLYVGTNAEFEPFEYREGD-KIVGF 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    ++  I  +   I+ + +       AL++K+ID++      T  R+    + F 
Sbjct: 55  DIDLINEIAKLIGAE---IEVVDMQFDGLLPALEAKKIDLIVAGMTATEERKQF--VNFS 109

Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y   Q  ++      I++    +G  + V  G T ++ +++             F  
Sbjct: 110 DPYYNSKQSIVVLSNNTDITTFDNFAGKKVGVVLGYTGDILVSEM-----TNVEVQKFNA 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A ++ + DA   D          N   +E  ++    +    + A+ + DTE  
Sbjct: 165 TSETILALKSQKVDAVVLDYEPAKNYVAQN---NELKLIETDSATEEYSIAMRKDDTELL 221

Query: 239 NIVSWTHY 246
             V+    
Sbjct: 222 TKVNDALK 229


>gi|261406265|ref|YP_003242506.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261282728|gb|ACX64699.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 480

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 92/283 (32%), Gaps = 25/283 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M + F  ++++  +++L F S            ++  +  G +     +     +     
Sbjct: 1   MKRKFTAWMTLFMVVVLSFGSLVHAEG------EKKTVILGTSADYAPYEFHKTIDGVDT 54

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +  +   +     +       L S ++D +    + T   +    
Sbjct: 55  IVGFDIDIAKEIAKDLGAE---LIIKDTSFDALLPELTSGRVDFVISGMNPTE--DRRKS 109

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    Y   Q  ++ K+     +++  L GA I VQ  +  E        A+      
Sbjct: 110 IDFSEPYYAAEQSVVVRKEDALKFNTLESLEGARIGVQKSSIQESIAKTIPNAN-----V 164

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +++ ++     + R D    +                             A  + +G
Sbjct: 165 VSLDKIPDLLLQLESERVDVVLAEYPIAKTNMNEAT--MAITDAKPTAENDAYAIGVRKG 222

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
           + E    ++ T   +    ++     + + ++   T  ++  F
Sbjct: 223 NEELLGSINATLERLKENNQIQKFVDDASDLAAGRTAENLNTF 265


>gi|171910768|ref|ZP_02926238.1| amino acid ABC transporter, amino acid-binding protein
           [Verrucomicrobium spinosum DSM 4136]
          Length = 322

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 79/249 (31%), Gaps = 17/249 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +V+      L     S         KK   L   ++     F  V   G++ G  VD  R
Sbjct: 52  WVAASAACALVGCGPSDQPGAPAKPKK---LVVAMDATYPPFEVVDEKGEFYGVSVDLGR 108

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L   +  +   +++  +N      AL+S  +D +  +      R     + F       
Sbjct: 109 ELGKFLGRE---VEFRNINFDGLIAALKSGSVDCVISSMSANDDRRR--SIDFSDPYVKT 163

Query: 126 GQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           G   +   K  + S+  L   G  + V+ GTT E     +          +V +      
Sbjct: 164 GLAILAAAKSPVQSLEDLKAPGRRVAVRLGTTGEQYARQFLP----DASLVVLDSDTACV 219

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                   DA+  D  +L         P    +L   + +   A  I QG+T+     + 
Sbjct: 220 MEVVKAGVDAWIYDQLSLMNYHNR--HPEATRVLLQPLREEVWAIGIQQGNTDLKTKANE 277

Query: 244 THYAMVTAE 252
              A   AE
Sbjct: 278 FL-AKFRAE 285


>gi|326315081|ref|YP_004232753.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323371917|gb|ADX44186.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 274

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 14/224 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L +I+K G ++  I      F  +  +   +G+D+D    ++  +      ++ +P+ 
Sbjct: 39  DVLANIQKAGVVRVAIPQDFPPFGSLGTDLKLQGYDIDMANLVAKELGVK---VELVPVT 95

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           +  R   L + + D++  +      R     + F        +     K+  I   + L+
Sbjct: 96  STNRIPYLTTGKADLVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKEAVIKGPADLA 153

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA- 203
           G +I V  G+T +L+L     A         +E       +Y   +    T       A 
Sbjct: 154 GKTIGVTRGSTEDLSLTKLAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVANAV 210

Query: 204 -LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +    +      + D     P    + +G+      V     
Sbjct: 211 NERTKLRQLDAKFAVEDT----PCYVGVAKGEDALLQKVDAIIT 250


>gi|254429528|ref|ZP_05043235.1| Bacterial extracellular solute-binding protein, family 3
           [Alcanivorax sp. DG881]
 gi|196195697|gb|EDX90656.1| Bacterial extracellular solute-binding protein, family 3
           [Alcanivorax sp. DG881]
          Length = 260

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 84/253 (33%), Gaps = 16/253 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59
           M K     ++  + L     S     L      G  L+ G+             G   G 
Sbjct: 1   MMKRMGWILVLAVGLLAGCSSNGHGELE-----GEALRVGVMPDYPPLVFR-EEGKVVGL 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + DF   LS  +    S  +Y  L+  + F AL++ +IDI+      T  R+ +   +  
Sbjct: 55  ERDFAEQLSQDLERPFSLHEYTQLS--DLFAALKNNEIDIIMSGISITPARQKAFAFSLP 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIVFE 177
             T        +     +++   L      V    GTT E  + +   A         F 
Sbjct: 113 YTTIGQMAMIRLDDAARLATPGALFTGQYRVGYKNGTTGEAFVKETMDA-----QTRGFN 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   A      DA+  D   ++ L    + P + + L   ++K  LA  + + D+E 
Sbjct: 168 SNTEATQALVNGDIDAFIHDAPTVWNLANKREYPVKLLGLYKPLTKEQLAWVMRKNDSEL 227

Query: 238 YNIVSWTHYAMVT 250
              V     + V 
Sbjct: 228 KQQVDTVLKSWVN 240


>gi|325525789|gb|EGD03519.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. TJI49]
          Length = 259

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 90/255 (35%), Gaps = 22/255 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + I  L+++  ++++ + S          ++ G++     F    A+G   GFD
Sbjct: 1   MKRTPMLLIGALLLVAGSAYARDWST---------IRFGVDASYPPFESKTADGKLVGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L   +    ++  ++          L++++ D +      T  R     +AF  
Sbjct: 52  IDVGNELCRRL---NAQCVWVENAFDGMIPGLKARKFDGILSTMSMTPAR--VKQIAFTS 106

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K   +  +   L+G SI V+ G+  E     ++ +     + + +   
Sbjct: 107 KLFHVPTRLVTRKGANLQPTAESLAGKSIGVEQGSMQETYAKVHWGSKG--VNIVSYADQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++ A   A R D    +        L   R   +      +    +     A  + + +
Sbjct: 165 DQVYADLLAGRLDGSLQNAVQAERGFLNTPRGRPYDFAGPALDDKAIFGPGTAIGLSKDN 224

Query: 235 TEWYNIVSWTHYAMV 249
           T+    +     AM+
Sbjct: 225 TDLKEKLDAAIAAMI 239


>gi|260891035|ref|ZP_05902298.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Leptotrichia hofstadii F0254]
 gi|260859062|gb|EEX73562.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Leptotrichia hofstadii F0254]
          Length = 263

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 81/248 (32%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     ++ + LI LF  S              G   +K G       F     +G   G
Sbjct: 1   MKNILKLTGILLIGLFLISCGRKQENGKSASSEGKQKVKVGTEGVYAPFTFTDGSGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+    +      D   I+++P      FL L+SK+ D ++        RE      F
Sbjct: 61  YDVEVVEEIGKRANLD---IEFVPTPWDSMFLGLESKKFDFIANEIAKNPEREK--KYTF 115

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I+ K +  I ++  L G  +    G+    TL D F  +    +     
Sbjct: 116 SDDYLVSAAQIIVKKGRTDIKTLEDLKGKRVMTGVGSNYNKTLTD-FDKNKEINYAYFDG 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            V          + DA   D         T  R +   I+ + ++K+P+     +   E 
Sbjct: 175 NVSIALEEIAQGKADATLNDRLT--VGYFTKQRGNLVEIVGEPVTKTPVYFTFRKDSEEL 232

Query: 238 YNIVSWTH 245
            N V+   
Sbjct: 233 KNKVNKAL 240


>gi|167724971|ref|ZP_02408207.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei DM98]
 gi|167907857|ref|ZP_02495062.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei NCTC 13177]
          Length = 240

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
           +A  L  I     +        V F  +       GF  D   A+       +     +I
Sbjct: 15  HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y+P+  + R   L +   D+   +T  T  R     ++F    ++ G   ++ K   I 
Sbjct: 75  AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G ++   AG+T E  +  Y   H++    +  +          + R      D 
Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             L+ ++     P    +  D +   P    + +GD   
Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|21910051|ref|NP_664319.1| putative ABC transporter [Streptococcus pyogenes MGAS315]
 gi|21904242|gb|AAM79122.1| putative ABC transporter [Streptococcus pyogenes MGAS315]
          Length = 270

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 68/233 (29%), Gaps = 14/233 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             IKK   L   ++     F     V       G DV   +A++  +  D   ++  P++
Sbjct: 32  ERIKKTRKLVVAVSPDYAPFEFKALVNGKDTIVGADVQLAQAIADELDVD---LELSPMS 88

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS--VSQ 142
                 +LQ+ + D+       T  R       F    Y      +M       +  +S 
Sbjct: 89  FDNVLSSLQTGKADLAISGISHTKERAKV--YDFSIPYYQAENAIVMRASDAKVTKNISD 146

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+G  +  Q G+  E  +       N     I    + E     +A +  A T +     
Sbjct: 147 LNGKKVAAQKGSIEEGLVKIQLPKAN----LISLTAMGEAINELKAGQVYAVTLEAPVAA 202

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                +   +              A A+ +   +    V+     +   E   
Sbjct: 203 GFLAQHKDLALAPFSLKTSDGDAKAVALPKNSGDLTKAVNKVIAKLDEQERYK 255


>gi|167758322|ref|ZP_02430449.1| hypothetical protein CLOSCI_00661 [Clostridium scindens ATCC 35704]
 gi|167664219|gb|EDS08349.1| hypothetical protein CLOSCI_00661 [Clostridium scindens ATCC 35704]
          Length = 263

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 76/259 (29%), Gaps = 22/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD----------IKKRGFLKCGINTGLVGFAEV 50
           M K    + LCL + F  S +                     +   +   +T    F   
Sbjct: 1   MKKKLLAAFLCLTMAF--SLAACGDSEDAGKTDKKKDSKDDGKKVYQVATDTTFAPFEFE 58

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              GD  G D+D   A++     +        +  +    AL++ Q D +      T  R
Sbjct: 59  NDEGDMVGIDLDILAAIAEDQGFEYE---LQIVGFQAAVNALEAGQADAVIAGMSITDER 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F    Y  G G  + K   I S   L G ++  + GT            +   
Sbjct: 116 KE--KYDFSDEYYQSGVGMAVKKDSDIDSYEDLKGKTVAAKLGTEGCTFAESIADQYGF- 172

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                FE    +     +    A   D   +        R  E  +  D+   +P   A+
Sbjct: 173 -TVTQFEDSSTMYQDVISGNTVACFEDYPVMGYEI---SRGLELKLPLDMEKGAPYGFAV 228

Query: 231 IQGDTEWYNIVSWTHYAMV 249
           ++G+      +     A +
Sbjct: 229 MKGENAELLKMFNAGLANL 247


>gi|258645623|ref|ZP_05733092.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Dialister invisus DSM 15470]
 gi|260402983|gb|EEW96530.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Dialister invisus DSM 15470]
          Length = 265

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 14/230 (6%)

Query: 29  DIKKRGF---LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           D  K G    ++ G  T    F   K +  + GFD+D   A+   +    SK+++  +  
Sbjct: 35  DAAKSGVPSIVRVGAETTFPPFEFTKDD-KYVGFDLDLAEAVIKQMG---SKMEFKSMGF 90

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                A+QS QID+++        RE  +  +            +      +   + L G
Sbjct: 91  DALIPAVQSGQIDMIASGLSANPEREKQVAFSDVYFDKNGFVIIVNKDNDSLKDWADLEG 150

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             +  Q GT     + +       K      +   +     RA   DA+  D        
Sbjct: 151 KKVGAQVGTEPVKMIQE------AKGEVKQLDSNAQAFMELRAKTLDAFVVDQPV-AMFY 203

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +      +  I+    +      A+ + + E    V+     +    E  
Sbjct: 204 MKQGGSEDLKIVGTPKTDVGFVFAMKKENKELQAAVNKALKELKANGEYD 253


>gi|325126022|gb|ADY85352.1| Glutamine ABC transporter solute-binding component [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 227

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 71/195 (36%), Gaps = 7/195 (3%)

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G  +GF++D   A++  I    SK  + P+  K R   L +  +D +      T  R 
Sbjct: 5   KTGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAVISTMTITKER- 63

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               + F  + +   +  I+ K   I S++ L+   + V A   T+  +A+       K 
Sbjct: 64  -MKVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTD--VANQVAKLASKA 120

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               F+       A +A + D    D   L  L        E  +    +++ P    + 
Sbjct: 121 SVKQFDDYGSAFNALKAGQGDVMIDDNGILAGLIADTP---EFTLTKASLAEEPYGIGVE 177

Query: 232 QGDTEWYNIVSWTHY 246
           +G TE    ++    
Sbjct: 178 KGQTEMRQAINQALK 192


>gi|300362096|ref|ZP_07058273.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300354715|gb|EFJ70586.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 544

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 12/228 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78
              S+L  IKK G L  G +                 + G D++  + ++  +     K+
Sbjct: 82  AEGSVLKKIKKSGELVVGTSADYPPLEFTASENGKTKYVGVDIELAKDIAKDL---NVKL 138

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137
               ++     +AL++ ++D++      T  R+ S+  +            +  K     
Sbjct: 139 VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 198

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S+  L G +I  Q G+     +    K            ++  +  A ++ +  A   +
Sbjct: 199 TSIQSLKGQTIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 254

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +      N+     V      ++S  A AI +G  E    V+ T 
Sbjct: 255 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 301


>gi|284033026|ref|YP_003382957.1| extracellular solute-binding protein family 3 protein [Kribbella
           flavida DSM 17836]
 gi|283812319|gb|ADB34158.1| extracellular solute-binding protein family 3 [Kribbella flavida
           DSM 17836]
          Length = 290

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDW 56
            +   +     + +   +  ++           + + G L+ G  T       V  +G +
Sbjct: 8   RRIAALGTAITLAVTLAACGSDDQTDASGPDLGLLQPGTLRIGTLTDAPPNVYV-KDGKF 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD D   A+++ +   P    ++  +       +   Q D+ S +   T  R+ ++  
Sbjct: 67  TGFDNDLITAVAAKLNLKPE---FVGTDFSALLSQVNGGQYDLGSSSITVTEARKKTVA- 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F     F   G    K  GISS  QL+G  + V  GT  +    +         +P+  
Sbjct: 123 -FSNGYDFGYLGLNTTKTSGISSFDQLTGKRVVVVQGTVQDDYATE------KNLNPVRV 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                     +A   DA+         +       +  +   ++    P+A A+ + + +
Sbjct: 176 PNYNAALGQLKAGTADAWVSPAEIGEKMAKEQGGGTVILAAKELSEA-PMAFAVAKSNDK 234

Query: 237 WYNIVSWTHYAMVT 250
               V+     ++ 
Sbjct: 235 LREAVNKALDEVIA 248


>gi|262282087|ref|ZP_06059856.1| ABC transporter [Streptococcus sp. 2_1_36FAA]
 gi|262262541|gb|EEY81238.1| ABC transporter [Streptococcus sp. 2_1_36FAA]
          Length = 279

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 15/253 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKAN 53
           M K       +++    +    + S + S     K   K+  ++         F+    +
Sbjct: 1   MKKLVKYSALLALTFAAVGTLAACSASNSKSESGKSDEKKVTVEIATVGTTRPFSYDDED 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G++++  R +      D  +I +        F  L S +  I + N      +E +
Sbjct: 61  GKLTGYEIEVLREVFK--GSDKYEINFNKTKWTSVFAGLDSDRFQIGANNIS--YSKERA 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               +      +    ++ K   I S+  + G S  V  GT+T   L DY K H  K   
Sbjct: 117 GKYLYGNPYAKNPTVLVVRKGTDIKSLDDIGGKSTEVVQGTSTAKQLEDYNKEHPKKETK 176

Query: 174 IVFER--VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AI 230
           I +    +++I       R D    +        +         ++     + P      
Sbjct: 177 INYTDGTIQQILVNLNEGRADYKIFER-ISVDTIIKEQNLENLEVIELPSDQQPYVYPLF 235

Query: 231 IQGDTEWYNIVSW 243
            QG  E    V  
Sbjct: 236 AQGQEELKTFVDK 248


>gi|224824128|ref|ZP_03697236.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
 gi|224603547|gb|EEG09722.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Lutiella nitroferrum 2002]
          Length = 255

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 84/251 (33%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +   I+L   +    A      K    ++ G+N     F     +G   GFD
Sbjct: 1   MRK-----LALAIMLACAASGAMA------KDWKVIRFGVNPSYAPFESKATDGKLVGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    ++  ++         AL++K+ D +  +   T  R     +AF  
Sbjct: 50  IDLGNAICDKL---KARCVWVENAWDGIIPALKAKKFDAILSSMAVTEKR--LEQVAFTD 104

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K  G   +   L G  I V+ G+T E     Y++   +    + ++  
Sbjct: 105 KIYNVPPRLVARKDAGFQPTAEALKGKRIGVEQGSTAETYAKTYWEPKGVA--VMSYQNQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + +     A R DA            L +            ++ S       A  + + D
Sbjct: 163 DLVYQDLTAGRLDAAFQSSVQAELGFLKSSAGHGFAFAGAGVTDSKTLGVGAAIGLRKED 222

Query: 235 TEWYNIVSWTH 245
           T+   +++   
Sbjct: 223 TDLAKLINTAL 233


>gi|167571743|ref|ZP_02364617.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           oklahomensis C6786]
          Length = 264

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 20/252 (7%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    +++ C + +   S +  A      +    L+ G+      F    A G+ +GF
Sbjct: 1   MKRLQICLALACALGVVTGSGAARA------EAAQTLRFGLEAQYPPFESKAATGELQGF 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+           +++  +      ALQ ++ D ++   + T  R     + F 
Sbjct: 55  DIDVGNAVCKEA---KLSCKWIETSFDGLIPALQGRKFDAINSAMNATDQR--RQAIDFT 109

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            + Y      I     G + +   L G  I V  G+  E     ++         + ++ 
Sbjct: 110 TVIYRVPTQLIARADSGLLPTPESLKGKRIGVLQGSIQEAYANAHWA--GAGVRVVAYQD 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233
             +  A   A R D       A     L+         +   +         +A  + +G
Sbjct: 168 QNQAYADLTAGRLDGTLVLAPAGQRGFLSRPDAKGFAFVGQPVRDDKILGSGIAFGLRKG 227

Query: 234 DTEWYNIVSWTH 245
           D      ++   
Sbjct: 228 DDALKTRLNAAI 239


>gi|149909993|ref|ZP_01898642.1| subunit of the lysine/arginine/ornithine transporter
           (ABCsuperfamily) [Moritella sp. PE36]
 gi|149807007|gb|EDM66966.1| subunit of the lysine/arginine/ornithine transporter
           (ABCsuperfamily) [Moritella sp. PE36]
          Length = 253

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 75/248 (30%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++   +L  ++                ++ G+++    F     +G+  GF+
Sbjct: 1   MKK--LACVIATSLLLSSAVVAKEWT--------DVRLGVDSPYKPFEYKTPDGELTGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +      +     ++  +       L S++ D +  +   T  R+    + F  
Sbjct: 51  IDLGNEVCKRANWN---CTWVVQSWDGIIPGLLSRKYDAIFSSMSITDARKK--KVLFSE 105

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y     +         ++  +      I VQ GT  +  + + + ++N       +  
Sbjct: 106 PYYNTPSAWFAAADFKLDVADKAAFKKLRIGVQRGTVQDTHVTENYASNN---KIKRYNT 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEW 237
             ++       R D    D        L  ++   +  + D       +  A+ + D   
Sbjct: 163 SGDLLLDLEGGRLDMVLLDFPVGDTTLLIPEKKGAYAAVGDTFQLGEGMGVAMRKRDKSL 222

Query: 238 YNIVSWTH 245
               +   
Sbjct: 223 AATFNKVL 230


>gi|153814548|ref|ZP_01967216.1| hypothetical protein RUMTOR_00762 [Ruminococcus torques ATCC 27756]
 gi|317500590|ref|ZP_07958811.1| hypothetical protein HMPREF1026_00754 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089309|ref|ZP_08338210.1| hypothetical protein HMPREF1025_01793 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848042|gb|EDK24960.1| hypothetical protein RUMTOR_00762 [Ruminococcus torques ATCC 27756]
 gi|316898023|gb|EFV20073.1| hypothetical protein HMPREF1026_00754 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330405490|gb|EGG85022.1| hypothetical protein HMPREF1025_01793 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 271

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 85/251 (33%), Gaps = 29/251 (11%)

Query: 1   MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46
           M +     +LC  ++                   + + S L  +K++G L  GI T    
Sbjct: 1   MKRRVLSVLLCAGLVVSVLAGCGSDDAKKDSGKKAASESDLDYVKEKGTLVVGI-TNFEP 59

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                  G+W GFD D  +A   ++  D   ++++ ++   + L L  K ID +      
Sbjct: 60  MDYQDEEGEWIGFDADMAKAFGESLGVD---VEFVEIDWDNKILELDGKTIDCVWNGMTL 116

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164
           T   E++  +        + Q  ++   K         LS  S  V++G+  E    D  
Sbjct: 117 TE--EVTSSMECTDAYLNNAQVVVLPADKADKYQDEKSLSDLSFAVESGSAGE----DEV 170

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           +   + + P+  +   +      A   DA   D+    A+       ++      +  + 
Sbjct: 171 ENRGLDFTPVTAQ--ADALMEVAAGTSDAAVIDLLMATAMIGEGTNYADLAYTVRLSEEE 228

Query: 225 PLAPAIIQGDT 235
                  +G  
Sbjct: 229 -YGVGFRKGSD 238


>gi|94988748|ref|YP_596849.1| glutamine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992573|ref|YP_600672.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS2096]
 gi|94542256|gb|ABF32305.1| glutamine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|94546081|gb|ABF36128.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS2096]
          Length = 724

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT++   L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|71903722|ref|YP_280525.1| transporter [Streptococcus pyogenes MGAS6180]
 gi|71802817|gb|AAX72170.1| transporter [Streptococcus pyogenes MGAS6180]
          Length = 724

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT++   L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|304393288|ref|ZP_07375216.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Ahrensia sp. R2A130]
 gi|303294295|gb|EFL88667.1| histidine ABC transporter, periplasmic histidine-binding protein
           HisJ [Ahrensia sp. R2A130]
          Length = 255

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 13/215 (6%)

Query: 35  FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L+ G+++     F    A G+WKGF+++   AL  A+     +  ++P+       AL 
Sbjct: 24  ELRLGLDSAPYEPFYARTAGGEWKGFEIEVGEALCKAM---NEECVWVPIAWDGIIPALT 80

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S +ID +  +   T  R     + F    Y      I  K   I S+  L G ++ VQ  
Sbjct: 81  SNKIDAIVASMSITEER--MKTIDFSNKYYNTPAALIAPKASEIKSLDDLKGKTVGVQVS 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT     A++ +A         ++   E +    A R DA   D  AL     + +    
Sbjct: 139 TTH----ANFAEAKIPGATVKTYQDFNEHNQDLFAGRVDAIVADSLALEPFLKSKEGEGM 194

Query: 214 HVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            V L    + I    +   + + DTE  +  +   
Sbjct: 195 EVKLTLKDEAIFGLGVGAGVRKADTELKDKFNKAI 229


>gi|330809876|ref|YP_004354338.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377984|gb|AEA69334.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 241

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 85/224 (37%), Gaps = 15/224 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   L+ G++     F    A+G  KGFD+D   A+ + +     K  ++  +      
Sbjct: 4   KEYSTLRFGVDANYAPFESKAADGSLKGFDIDLGNAICAKL---SVKCIWVESDFDGLIP 60

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
            L++ + D +  +   T  RE    + F    +     ++  K  G+S  V+ L G ++ 
Sbjct: 61  GLRAGKFDGILSSMTVTATREK--AIDFSNELFSGFTSYVFKKGSGLSADVASLKGKTVG 118

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
              G+  E                  ++  +++     A R DA   D        + + 
Sbjct: 119 YFQGSIQEAYAKAVLDKAG--VKIQSYQNQDQVYYDLVAGRLDASLQDTLQAQMGFIKSA 176

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248
           + +++ + P + S  P      A  I +G+TE   ++     A+
Sbjct: 177 QGTDYEMSPPVES--PYLPSKTAIGIAKGNTELKALLDKAIQAL 218


>gi|71910889|ref|YP_282439.1| transporter [Streptococcus pyogenes MGAS5005]
 gi|71853671|gb|AAZ51694.1| transporter [Streptococcus pyogenes MGAS5005]
          Length = 724

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 11/241 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             TS +T          +   K   ++    F      G + G D++  +A++       
Sbjct: 251 ATTSQATGNPSAKATPTKDSYKIVSDSSFAPFEFQNGKGKYVGIDIELIKAIAKQ---QG 307

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            KI+           A+QS Q D +      T  R+      F    Y       +   K
Sbjct: 308 FKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSDPYYTSNIILAVKAGK 365

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I +   L   ++  + GT++   L +    +    +   F+    +  +  +   DA  
Sbjct: 366 NIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGSSMYDSLNSGSVDAIM 423

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D      LK    +        + IS   +  A+ +  + E   + +    A+  + + 
Sbjct: 424 DDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIEMFNNGLAALKKSGQY 480

Query: 255 G 255
            
Sbjct: 481 D 481


>gi|325522764|gb|EGD01250.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. TJI49]
          Length = 259

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++  +      ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCAWVENSFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+    + F P  Y      +  +   +   V+ L G  + V  G
Sbjct: 83  RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAKRGSPLRPDVASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + ++  ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ D +             + +GD      +     A+
Sbjct: 199 YQIVGDPLKDPATLGEGTGFGMRKGDKALQAKIVGALDAL 238


>gi|304411004|ref|ZP_07392620.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS183]
 gi|307301873|ref|ZP_07581631.1| extracellular solute-binding protein family 3 [Shewanella baltica
           BA175]
 gi|304350539|gb|EFM14941.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS183]
 gi|306913911|gb|EFN44332.1| extracellular solute-binding protein family 3 [Shewanella baltica
           BA175]
          Length = 244

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 71/224 (31%), Gaps = 16/224 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD+D  + ++         ++   +     
Sbjct: 23  KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
            +AL S +ID ++     T  R+ ++  +  P         +      I+++  + G   
Sbjct: 80  IVALNSGKIDFIASGMTITAERQANVNFS-EPYYEATQVVLVNKDNNSINTLEDIKGKHF 138

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GTT +        +     +   F    E     +  + D    D          N
Sbjct: 139 AVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNSKVDLVLFDSEPAANYLAKN 192

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               E  ++           A+ +   E    ++ T  A + A+
Sbjct: 193 P---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232


>gi|15675263|ref|NP_269437.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS]
 gi|13622436|gb|AAK34158.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS]
          Length = 724

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 11/241 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             TS +T          +   K   ++    F      G + G D++  +A++       
Sbjct: 251 ATTSQATGNPSAKATPTKDSYKIVSDSSFAPFEFQNGKGKYVGIDIELIKAIAKQ---QG 307

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            KI+           A+QS Q D +      T  R+      F    Y       +   K
Sbjct: 308 FKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSDPYYTSNIILAVKAGK 365

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I +   L   ++  + GT++   L +    +    +   F+    +  +  +   DA  
Sbjct: 366 NIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGSSMYDSLNSGSVDAIM 423

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254
            D      LK    +        + IS   +  A+ +  + E   + +    A+  + + 
Sbjct: 424 DDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIEMFNNGLAALKKSGQY 480

Query: 255 G 255
            
Sbjct: 481 D 481


>gi|302336265|ref|YP_003801472.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
 gi|301320105|gb|ADK68592.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
          Length = 323

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 16/253 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
           F ++L    +   +  + +S    IK  G  + G       FA++   +G  +GFD    
Sbjct: 56  FDALLAAGAVADDASVSASSWAKRIKDAGSFRLGGVQTSTLFAQLDETDGKLRGFDAGLA 115

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + L   I  D SK  +  + +  R   LQ+ Q+D +      T  R+    ++F    Y 
Sbjct: 116 QLLVRYILGDESKYDFTQVTSSTRESVLQNDQVDAVFATYSITDDRKK--AISFAGPYYT 173

Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             QG ++      I+SV  L+  ++ VQ+G+T    +A+             F   EE  
Sbjct: 174 SQQGILVAASNSDINSVDDLADKNVAVQSGSTGPQIVAELAPKA----VTQEFTTDEEAR 229

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVS 242
            A    R DAY  D      L      P ++ +  +           +         +  
Sbjct: 230 TALEQGRVDAYVID--VTMQLSSIAKNPGKYRLAGEAFGPTDAYGIGLPLDSDGVAFV-- 285

Query: 243 WTHYAMVTAEELG 255
               A + A E  
Sbjct: 286 ---NAWLKAIEDD 295


>gi|146318672|ref|YP_001198384.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis 05ZYH33]
 gi|145689478|gb|ABP89984.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis 05ZYH33]
          Length = 251

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 80/239 (33%), Gaps = 14/239 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78
              + L +++++G +   +N     F             G D++  +A+   +  +   +
Sbjct: 8   QEDTSLKEVQEKGKIIVALNPEFPPFEFRTLVDGKDTIVGADIELAKAIGQELGVE---V 64

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136
           ++  ++       +QS Q DI       T  R       F    Y      I++K+    
Sbjct: 65  EFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV--YDFSIPYYTSTNKVIINKEDLAQ 122

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
            +S+  L+ A+I  Q G+  E  + +   +       I      E+    ++ + +A   
Sbjct: 123 YTSLDSLAEANIGAQKGSIQEQIIKEQLPS----STVIALASNGELINQLKSQKVEAVIF 178

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +     A    ND                 A A+ +G T     V      +V + ++ 
Sbjct: 179 EEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALPKGSTALKEKVDSVITKLVESGQMD 237


>gi|94994565|ref|YP_602663.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10750]
 gi|306827161|ref|ZP_07460451.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus pyogenes ATCC 10782]
 gi|94548073|gb|ABF38119.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10750]
 gi|304430617|gb|EFM33636.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus pyogenes ATCC 10782]
          Length = 724

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT++   L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|16079990|ref|NP_390816.1| sulfur containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310882|ref|ZP_03592729.1| hypothetical protein Bsubs1_16036 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315207|ref|ZP_03597012.1| hypothetical protein BsubsN3_15932 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320125|ref|ZP_03601419.1| hypothetical protein BsubsJ_15848 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324407|ref|ZP_03605701.1| hypothetical protein BsubsS_16007 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81637560|sp|O34406|TCYJ_BACSU RecName: Full=L-cystine-binding protein tcyJ; Flags: Precursor
 gi|2293247|gb|AAC00325.1| putative glutamine-binding protein [Bacillus subtilis]
 gi|2635403|emb|CAB14898.1| sulfur containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 269

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 5/200 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   V +L +  L     S   +     ++   +  G  T     A +   G+  G+D+
Sbjct: 3   KRKGLVLLLSVFALLGGGCSQTNNKTD--RQAQTVIVGTGTDFPNIAFLNEKGELTGYDI 60

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A+   +       ++  ++      +L +K+ID+++ N      RE        P 
Sbjct: 61  EVMKAIDKEL--PQYTFEFKTMDFSNLLTSLGNKKIDVIAHNMAKNKEREKRFLYHKVPY 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VE 180
            Y      +      I ++  L G ++ V A +     +  Y K H    H     +   
Sbjct: 119 NYSPMYITVKEDNHKIHTLKDLHGKTVIVGATSNAADYITKYNKTHGSPIHLKYAGQGSN 178

Query: 181 EIDAAYRAHRCDAYTGDISA 200
           +        R DA      A
Sbjct: 179 DTANQIETGRADATIATPFA 198


>gi|319942018|ref|ZP_08016337.1| glutamine ABC transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319804402|gb|EFW01280.1| glutamine ABC transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 265

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 15/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKAN-GDWK 57
           M+K   +      +   T     A+            L  G++     F    +  G++ 
Sbjct: 1   MHKRRLIQFALAGLAGLTIHPLAAAAASQAADEDLPLLVAGMDAAYPPFGFKDSKTGEFV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD  RA+         +++   +       AL+++ IDI   +   T  R     + 
Sbjct: 61  GFDVDIIRAIGRTAG---FRVKVENIPFDGLIPALKTRTIDIAINDIGITAERAK--SVD 115

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y  G G ++ K  +GI S   L G  + V  G+T E+       A        VF
Sbjct: 116 FSDRYYIAGMGIVVAKGYQGIQSAKDLEGKRLAVTIGSTGEIAAKRIPHA-----QVRVF 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             + +       +  DA   DI              +   L   ++   L  A+ +G  +
Sbjct: 171 NTLSDCFLELINNGVDAVLNDIPTN-DYYAVTAGAGKVDSLSISLAAEDLGIAVKKGRKD 229

Query: 237 WYNIVSWTHYAMVTAEEL 254
               ++    ++  + E 
Sbjct: 230 LLEKINKGLASLKASGEF 247


>gi|226360127|ref|YP_002777905.1| amino acid ABC transporter amino acid-binding protein [Rhodococcus
           opacus B4]
 gi|226238612|dbj|BAH48960.1| putative amino acid ABC transporter amino acid-binding protein
           [Rhodococcus opacus B4]
          Length = 309

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 16/245 (6%)

Query: 22  TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
             A+ L   I   G +  G+N           +G   GFDVD   A+   +   P    Y
Sbjct: 57  AIAATLPEKIASSGKIIVGVNIPYSPNEFKDPSGKIVGFDVDLVDAVGKVLGVTPE---Y 113

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
              +  +   ++Q+   D+   +   T  RE    + F    +  G  +     K +   
Sbjct: 114 TEADFDKIIPSIQAGSYDMGMSSFTDTKERE--QSVDFT-TYFSAGVQWAQPAGKSV-DP 169

Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           +   G  + VQ  T  +        A    A       + F+  ++   A    + DA +
Sbjct: 170 TNACGLRVGVQTTTIEDLEEVPAKSAACVAAGKPPIEIVKFDSQDDAANAVALGKVDAMS 229

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D          +D   E     ++   +P    + +G       +      ++      
Sbjct: 230 ADSPVTAYAIKQSDGKIE--AAGEVFDAAPYGWPVAKGSP-LAQTLQQALQHLIDDGTYR 286

Query: 256 ITQKN 260
              +N
Sbjct: 287 TIAEN 291


>gi|310659738|ref|YP_003937459.1| cystine ABC transporter periplasmic-binding protein [Clostridium
           sticklandii DSM 519]
 gi|308826516|emb|CBH22554.1| cystine transporter subunit ; periplasmic-binding component of ABC
           superfamily [Clostridium sticklandii]
          Length = 269

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 86/248 (34%), Gaps = 10/248 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              +  + L  + F S    +S   +  +   +K G++     +  +   G+  GFDVD 
Sbjct: 9   IIILIAVALGSIMFFSTKDKSSTASEPAE--VIKVGMSGSYKPYTYLDEKGELTGFDVDV 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + +      +   I+++  +    F  L S ++D ++     T  RE      F     
Sbjct: 67  WKEIGKRTGHE---IEFVTSDFSGLFGMLDSAKLDTIANQITVTPERE--QKYLFTRPYV 121

Query: 124 FDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           + G   I    +  I  +  L G  + V  GT  E  + ++ K  N +   I ++     
Sbjct: 122 YYGAQLISKDDRNDIIDLESLKGKKVAVGLGTNYETIIREFDK--NSEIEIITYDSGSGS 179

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  R DA   D  AL ++   +  P +    P    ++       + + E    + 
Sbjct: 180 YQDVAIGRVDAAMNDRLALQSVINESGLPLKLAGPPINEMQNAFPFLNNEENKELVAQID 239

Query: 243 WTHYAMVT 250
               +M  
Sbjct: 240 SAIDSMYE 247


>gi|227877868|ref|ZP_03995884.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844269|ref|ZP_05549755.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|262047651|ref|ZP_06020605.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|293380559|ref|ZP_06626618.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295691987|ref|YP_003600597.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus ST1]
 gi|312976974|ref|ZP_07788723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Lactobacillus crispatus CTV-05]
 gi|227862530|gb|EEJ70033.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613347|gb|EEU18550.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|260572051|gb|EEX28617.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|290922873|gb|EFD99816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295030093|emb|CBL49572.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus ST1]
 gi|310896302|gb|EFQ45367.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Lactobacillus crispatus CTV-05]
          Length = 494

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 85/265 (32%), Gaps = 29/265 (10%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGF 47
           M K      F   I  L  LF  +   NA        S++  IK+   L  G +      
Sbjct: 1   MKKAKIIKTFLAFITMLSTLFLFNQPVNAANKEVETGSVMKKIKQSKELVVGTSADYPPL 60

Query: 48  AEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                   N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSENGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +   +G ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKIKDFAGKTVGAQTGSIQYSLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K    +       ++  +  A ++++      +          ND     V      
Sbjct: 176 KQMK----QSKVKGLGKINNLVLALKSNKISGIVMEEM-TAKAYQQNDNSLMAVRSDLRE 230

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++  A AI +G  +    V+ T  
Sbjct: 231 QQAGNAVAIAKGQNDLVAAVNKTIN 255


>gi|308069275|ref|YP_003870880.1| Probable amino-acid ABC transporter extracellular binding protein
           yqiX precursor [Paenibacillus polymyxa E681]
 gi|305858554|gb|ADM70342.1| Probable amino-acid ABC transporter extracellular binding protein
           yqiX precursor [Paenibacillus polymyxa E681]
          Length = 487

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 86/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   F   +L  +IL  T      +   + K +  L  G++     +     +     
Sbjct: 1   MKKAYRFTALVLTAVILLLTGLPMLNAYGTEAKPQKKLVVGMSADFPPYEFHKVINGKDT 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDV+  + ++  +  D   +    ++      ALQS ++D++      T  R     
Sbjct: 61  IVGFDVEIAKEIAKDL--DAEMVP-EDMSFDSLLPALQSGRVDLVLSGMTPTDERRK--S 115

Query: 116 LAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F  + Y   Q  ++    K    ++  L G  I  Q G+  E        A       
Sbjct: 116 IDFSDVYYRSKQVIMVRPEDKDKYPTMDALKGEKIGAQKGSIQEEIAQKVPNA-----SV 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +++ ++    R  R +A   + +        +   +    +P+       A  I +G
Sbjct: 171 TSLDKISDLVLQLRTQRVNAVVIEDTVAKGY-TLDGTVTLAKAVPEDAGAE-TAVGIRKG 228

Query: 234 DTEWYNIVSWTH 245
           + E    V+ T 
Sbjct: 229 NAELLASVNKTL 240


>gi|19746296|ref|NP_607432.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232]
 gi|19748486|gb|AAL97931.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232]
          Length = 724

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT+    L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSAYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|115350778|ref|YP_772617.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115280766|gb|ABI86283.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 259

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 79/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKSPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+    + F P  Y      + H+   +    + L G  + V  G
Sbjct: 83  RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAHRGSPLRPDAASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + +   ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + +GD      ++    A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKGDKALQTKIAGALDAL 238


>gi|319941854|ref|ZP_08016175.1| hypothetical protein HMPREF9464_01394 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804507|gb|EFW01377.1| hypothetical protein HMPREF9464_01394 [Sutterella wadsworthensis
           3_1_45B]
          Length = 276

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 73/254 (28%), Gaps = 22/254 (8%)

Query: 2   YKDFFVSILCLII---------LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
            +    + L  +          +F  + S  A  L  IKK G ++ G     V ++    
Sbjct: 11  RRTLLSAALGAVAFSAIGTPLTVFAAAESDPAQQLDRIKKAGVIRIGTEGVFVPYSYHDE 70

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G   G+DV+  RA+++ I       Q++  +       + + + DI+    + +  R  
Sbjct: 71  QGRLTGYDVELARAVAAKIGVQA---QFIESSWDSLLAGVDAGRFDIVVNQVEASAARRA 127

Query: 113 SLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F     +D    ++      I     L G         +     +   +AH    
Sbjct: 128 --KYDFSVPYTYDHTAILVRSDNNDIKGFDDLRGKRAAE----SATANSSRIAEAHG--A 179

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  +   +      + R D       ++              ++        +   + 
Sbjct: 180 VIVGVQDFSQAVELVVSKRADTALNSELSIADFLRKMPD-VPVKVVATSTEAEEMCVLMP 238

Query: 232 QGDTEWYNIVSWTH 245
           +G       +    
Sbjct: 239 KGSQALKAAIDEAI 252


>gi|310642316|ref|YP_003947074.1| amino acid abc transporter, permease protein, his/glu/gln/arg/opine
           family [Paenibacillus polymyxa SC2]
 gi|309247266|gb|ADO56833.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Paenibacillus polymyxa SC2]
          Length = 487

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 100/287 (34%), Gaps = 22/287 (7%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   F   +L  +IL         +   + K +  L  G++     +     +     
Sbjct: 1   MKKAYRFTALVLSAVILLLAGLPMLTAYGSEEKPQKKLVVGMSADFPPYEFHKVINGQDT 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDV+  + ++  +  +        ++      ALQS ++D++      T  R     
Sbjct: 61  IVGFDVEIAKEIAKDLNAEMVP---EDMSFDSLLPALQSGRVDLVLSGMTPTDERRK--S 115

Query: 116 LAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F  + Y   Q  ++    K   S+++ L G  +  Q G+  E        A       
Sbjct: 116 IDFSDVYYRSKQVIMVRPEDKDKYSTMAALKGEKLGAQKGSIQEEIAQKVPNA-----SV 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +++ ++    R +R +A   + +        +   +    +P+       A  I +G
Sbjct: 171 TSLDKISDLVLQLRTNRINAVVIEDTVAKGY-TLDGTVTLAKAVPEDEGAE-TAVGIRKG 228

Query: 234 DTEWYNIVSWT---HYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           + E    V+ T     A  + E+       ++   + ++N  V  FL
Sbjct: 229 NAELLASVNKTLARLKADGSIEKFSTEASALSADRQVSSNSIVDIFL 275


>gi|300790865|ref|YP_003771156.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299800379|gb|ADJ50754.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 260

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 21/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +   + L     S +AS          L+ G  +       +  +G++ GFD
Sbjct: 1   MKKLIVTVLAAALTLTACGGSDSASA--------TLRVGTLSDAPPNIYL-KDGNYTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  +A+++       K+++   +       + S + DI S     T  R+ +  + F  
Sbjct: 52  NELLKAIAAK---QNLKLEFAATDFSALLGQVASGRYDIASSAIAQTDERKKT--VDFSA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              F+       +   ++    L+G  + V   T  +  L     +       + F    
Sbjct: 107 AYDFETMSIQAKQGTPVTDEKGLAGQRVAVIQATVGDHWLTSTVPSA----QAVRFPDYA 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYN 239
               A ++   DAY  D S   A K   D P   +++        P   A+ +G+ E   
Sbjct: 163 AALTALKSGAVDAYILDQSI--AEKNVADNPDAKLVVVKSFVTDVPHGFAVKKGNAELLG 220

Query: 240 IVSWTHYAMVT 250
            +      +++
Sbjct: 221 KIDSGLKQVIS 231


>gi|254473737|ref|ZP_05087132.1| cyclohexadienyl dehydratase [Pseudovibrio sp. JE062]
 gi|211957123|gb|EEA92328.1| cyclohexadienyl dehydratase [Pseudovibrio sp. JE062]
          Length = 272

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M + F   +  +  LF  S     S L +I   G LK G        +     +  +KG+
Sbjct: 15  MLRSFLTLLFAVGTLFSGSAFAQ-SALNEILDSGELKVGTTGDWNPMSVRDPASNGYKGY 73

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L++ +      + ++P + K     + + + + L+ +   +  R    G +  
Sbjct: 74  DIDIMNELATDLGVK---LTFVPTDWKTLVNGIVAGKYN-LTGSASISPSRMKVAGYSES 129

Query: 120 PITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            I+         +K +  +S         ++    GTT E    ++F          V E
Sbjct: 130 YISVEILPFTTSNKVEQFNSWDSINQKDVTVATTLGTTFEKLSKEWFP----NATIKVVE 185

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     + R D +         LK    +   +V + +  + +P+A  + Q D  W
Sbjct: 186 APARGYQEVLSGRADVFITSNIEGATLKAKFKQ-ITNVPVAESRNPTPIAMLMPQDDQVW 244

Query: 238 YNIVSW 243
            N ++ 
Sbjct: 245 INYINN 250


>gi|19745862|ref|NP_606998.1| putative ABC transporter (substrate-binding protein) [Streptococcus
           pyogenes MGAS8232]
 gi|50913959|ref|YP_059931.1| arginine-binding protein [Streptococcus pyogenes MGAS10394]
 gi|94990160|ref|YP_598260.1| arginine-binding protein [Streptococcus pyogenes MGAS10270]
 gi|19748012|gb|AAL97497.1| putative ABC transporter (substrate-binding protein) [Streptococcus
           pyogenes MGAS8232]
 gi|50903033|gb|AAT86748.1| Arginine-binding protein [Streptococcus pyogenes MGAS10394]
 gi|94543668|gb|ABF33716.1| Arginine-binding protein [Streptococcus pyogenes MGAS10270]
          Length = 278

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      L  ++L+  +    +  L     IKK   L   ++     F     V     
Sbjct: 11  FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 70

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +  D   ++  P++      +LQ+ + D+       T  R     
Sbjct: 71  IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 125

Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      +M       +  +S LSG  +  Q G+  E  +       N     
Sbjct: 126 YDFSIPYYQAENAIVMRASDAKVTKNISDLSGKKVAAQKGSIEEGLVKIQLPKAN----L 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     +A +  A T +          +   +              A A+ + 
Sbjct: 182 ISLTAMGEAINELKAGQVYAVTLETPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             +    V+     +   E   
Sbjct: 242 SGDLTKAVNKVIAKLDEQERYK 263


>gi|288961593|ref|YP_003451903.1| extracellular solute-binding protein, family 3 [Azospirillum sp.
           B510]
 gi|288913873|dbj|BAI75359.1| extracellular solute-binding protein, family 3 [Azospirillum sp.
           B510]
          Length = 275

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 79/245 (32%), Gaps = 22/245 (8%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T  +    IL  + KRG +K  +      F+ +    +  GFD+D  +A +  +      
Sbjct: 19  TPMAWAGEILDRVTKRGEVKLVLLNDYPPFSFINDKNELVGFDIDVAKAFAERLGVK--- 75

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-G 136
           +       +         + DI   +   T  R     L F    Y      ++HK +  
Sbjct: 76  LSIDTPAWEVIAAGNWRGRWDICICSMTPTAERAEV--LDFPVKYYESPAVLVVHKDEAR 133

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNM----------KYHPIVFERVEEIDAAY 186
           I  +  ++G ++  Q+G + E  L    K              K     +E         
Sbjct: 134 IKGIGDITGKTVAAQSGASYEAYLQHALKITAPDAQQPSFPFGKVTVAPYETETVAFQDL 193

Query: 187 RAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R DA   +       K   D   +  I+ D +   P   A+ +GD  W   V  
Sbjct: 194 GLGGGKRLDAVITN---YITAKERIDATGQFKIVSDKLYAEPNWVAVEKGDAAWSAKVKA 250

Query: 244 THYAM 248
           T  A+
Sbjct: 251 TIEAL 255


>gi|153836430|ref|ZP_01989097.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AQ3810]
 gi|149750332|gb|EDM61077.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus AQ3810]
          Length = 272

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 19/251 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L L I   T    + +   +  IK+RG L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKATITALLGLAIAMPTIAKEDVATPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L+        K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F       G     +K+        S        I  + G  T     + F        
Sbjct: 115 LFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F+   +           A            + +      +   + +SK   A A+  
Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVRL 229

Query: 233 GDTEWYNIVSW 243
           G+ +     + 
Sbjct: 230 GEEDKRAFFNK 240


>gi|71903241|ref|YP_280044.1| arginine-binding protein [Streptococcus pyogenes MGAS6180]
 gi|94988281|ref|YP_596382.1| arginine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|71802336|gb|AAX71689.1| arginine-binding protein [Streptococcus pyogenes MGAS6180]
 gi|94541789|gb|ABF31838.1| arginine-binding protein [Streptococcus pyogenes MGAS9429]
          Length = 278

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      L  ++L+  +    +  L     IKK   L   ++     F     V     
Sbjct: 11  FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 70

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +  D   ++  P++      +LQ+ + D+       T  R     
Sbjct: 71  IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 125

Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      +M       +  +S L+G  +  Q G+  E  +       N     
Sbjct: 126 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     +A +  A T +          +   +              A A+ + 
Sbjct: 182 ISLTAMGEAINELKAGQVYAVTLEAPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             +    V+     +   E   
Sbjct: 242 SGDLTKAVNKVIAKLDEQERYK 263


>gi|257878496|ref|ZP_05658149.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257894317|ref|ZP_05673970.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257812724|gb|EEV41482.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257830696|gb|EEV57303.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
          Length = 535

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 88/273 (32%), Gaps = 28/273 (10%)

Query: 1   MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44
           M +      F   +  L+ L F          T+ S+ +  +  I+ K+       ++  
Sbjct: 36  MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F    A G+++G DV     ++         I+           AL+S Q D +    
Sbjct: 96  APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T  R+      F    +  G    + K    I S   L G ++  + GT +   L+D+
Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
              +        F+  +++    +    DA   D   +        +  E     +  S 
Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 265

Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
              A A+ +  + E  N+ +     +    E  
Sbjct: 266 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298


>gi|297202328|ref|ZP_06919725.1| secreted protein [Streptomyces sviceus ATCC 29083]
 gi|197710152|gb|EDY54186.1| secreted protein [Streptomyces sviceus ATCC 29083]
          Length = 319

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 76/238 (31%), Gaps = 20/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+K G +K G N            G   G D D   AL   +  +    Q+   +   
Sbjct: 60  AKIQKAGVIKVGTNAEYAPMEYQ-EGGKIVGVDPDIAAALGKQLGVE---FQFTSGSFDG 115

Query: 88  RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHKKKG-- 136
              +L S + D+   +   T  R+            G+ F    +  G    + K     
Sbjct: 116 LISSLNSGRYDVAMSSITDTKARQEGLDDKGKKLGPGVDFVD-YFTAGTAIYVQKGNPKK 174

Query: 137 ISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           I S+  L G  + VQ GTT E  L         A   K     F+   E     ++    
Sbjct: 175 IGSIEDLCGQKVAVQHGTTYEQALQKQSTACTAAGKKKLDIESFDNDTEAQTRVKSGGAV 234

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A   D      +    D  +   ++ + +   P   A+ + + E  + +     A++ 
Sbjct: 235 AGVNDYPVAVDIARKADGGNAFEVVGEQVDAGPFGIAVNKENKELTSALEAAVNAIIQ 292


>gi|261839726|gb|ACX99491.1| ABC-type amino acid transport system substrate binding component
           [Helicobacter pylori 52]
          Length = 258

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 75/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  R  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIS--FFGGFLNASSLYERLINRETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKGIEDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 AQALLLVVQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAMQRLI 238


>gi|54296522|ref|YP_122891.1| hypothetical protein lpp0553 [Legionella pneumophila str. Paris]
 gi|53750307|emb|CAH11701.1| hypothetical protein lpp0553 [Legionella pneumophila str. Paris]
          Length = 244

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 13/228 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K +  L+   +     F  +  NG+ KGFD+D  + ++  +  +     +  +       
Sbjct: 23  KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSAVLP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           A+ S Q D+       T   E      F    YF+G   +    + +  +SQL+G  I V
Sbjct: 79  AVNSGQDDVAIATITITE--ERKKNFDFSKPYYFEGMAAVFDTSQPVKEISQLTGKKIAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q G+  E+ L   F            +   +   A  A   D    D +           
Sbjct: 137 QLGSVMEIWLHQNFPKA----EITALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
              + IL            + +G      I S         E   +  
Sbjct: 192 GLSYSILAKAN--EGYGLVLKKGSPLRDEINSALENLKAKGEIQKLES 237


>gi|221202164|ref|ZP_03575199.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
 gi|221208775|ref|ZP_03581774.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221171407|gb|EEE03855.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221177958|gb|EEE10370.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
          Length = 262

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 24/253 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M       ++I     L   +   +A           L+ G+      F     NG+ +G
Sbjct: 1   MKPTHSLKLAIALACALGSAAAVADAQT---------LRFGLEAQYPPFESKAPNGELQG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+           +++  +      AL+ ++ D ++   + T  R     + F
Sbjct: 52  FDIDVGNAVCE---TAKLTCKWIETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDF 106

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             I Y      I     G + +   L G  + V   +  E     +++   +    + ++
Sbjct: 107 TTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVA--IVAYQ 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQ 232
              +  A   A R DA      A     L+         +   +         +A  + +
Sbjct: 165 DQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRK 224

Query: 233 GDTEWYNIVSWTH 245
           GD      +    
Sbjct: 225 GDDALKAKLDAAI 237


>gi|170694817|ref|ZP_02885967.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170140177|gb|EDT08355.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 289

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 87/256 (33%), Gaps = 14/256 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F    L LI  F  S + +A+   +IK RG++          F  V A+G   G+D D  
Sbjct: 22  FRTCALALIATFGISHAAHAASAEEIKARGYITVATEDDYTPFEFV-ADGKNTGYDNDLL 80

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             +   I  +   ++   +        + + + D+       T  R  +    F   T  
Sbjct: 81  ALMRKKIGVE---VKQQVMPWSGILPGVTTGKYDMALSAVLVTDERRKT--FDFASPTCE 135

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK------YHPIVFER 178
               +   K   I     L G  +  + G+     L  + +    K         + ++ 
Sbjct: 136 AITFYATKKGSSIKGPDDLVGKVVGAETGSAMLTDLKLFNEELKKKHGGSGIKQIVEYQS 195

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E        R DA      +L +L     RP   +I   I   + +A A+ +G+T+  
Sbjct: 196 YPEAYQDLALGRVDAVANTQISLNSL--VKTRPDTFLIGQPIGKPTYIAWAVKKGNTDVL 253

Query: 239 NIVSWTHYAMVTAEEL 254
            +V      +  + E+
Sbjct: 254 KMVDAALLELRKSGEM 269


>gi|148360895|ref|YP_001252102.1| amino acid (glutamine) ABC transporter periplasmic amino acid
           binding protein [Legionella pneumophila str. Corby]
 gi|296106039|ref|YP_003617739.1| amino acid (glutamine) ABC transporter, periplasmic amino acid
           binding protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148282668|gb|ABQ56756.1| amino acid (glutamine) ABC transporter, periplasmic amino acid
           binding protein [Legionella pneumophila str. Corby]
 gi|295647940|gb|ADG23787.1| amino acid (glutamine) ABC transporter, periplasmic amino acid
           binding protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 244

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 72/228 (31%), Gaps = 13/228 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K +  L+   +     F  +  NG+ KGFD+D  + ++  +  +     +  +       
Sbjct: 23  KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSAVLP 78

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           A+ S Q D+       T   E      F    YF+G   +    + +  +SQL+G  I V
Sbjct: 79  AVNSGQDDVAIATITITE--ERKKNFDFSKPYYFEGMAAVFDNSQPVKEISQLTGKKIAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q G+  E+ L   F         +  +   +   A  A   D    D +           
Sbjct: 137 QLGSVMEIWLHQNFPKA----EIMALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
              + IL            + +G      I S         E   +  
Sbjct: 192 GLSYSILAKAN--EGYGLVLKKGSPLRDEINSALENLKAKGEIQKLES 237


>gi|172059801|ref|YP_001807453.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171992318|gb|ACB63237.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 259

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G  +GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKSPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+    + F P  Y      + H+   +    + L G  + V  G
Sbjct: 83  RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAHRGSPLRPDAASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + +   ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + +GD      +     A+
Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKGDKALQTKIVGALDAL 238


>gi|317047371|ref|YP_004115019.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316948988|gb|ADU68463.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 250

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 18/238 (7%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           + L   + S   S +        L  G++T  V F   + +  + GFD+D   A++  + 
Sbjct: 10  VTLALVACSATFSAMAQ----DKLVVGVDTAFVPFEFKQGD-KYVGFDIDLWDAIAQKM- 63

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                 +  P++       LQS+ +D+       T  R+    + F    Y       + 
Sbjct: 64  --HVSYELRPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSEGYYDADLLMAVK 119

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                I+  S L+G  + ++ GT      A  F     K   + F  ++      +A   
Sbjct: 120 SSDHAITKFSDLAGKKVGLKQGT-----AAASFMKAKYKADYVEFPNIDNAYLDLQAGNL 174

Query: 192 DAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           DA   D   +     T            D I       A+ + ++ W   V+    A+
Sbjct: 175 DAVVHDSPNVLYYVKTAGDGKVKSTGETDSILPQQYGFAMQK-NSSWTPKVNAALQAL 231


>gi|227820425|ref|YP_002824396.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium
           fredii NGR234]
 gi|227339424|gb|ACP23643.1| probable amino acid ABC transporter, substrate-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 275

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 83/259 (32%), Gaps = 22/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F    +    L F + +     L  +  +  +    N+G    + +  + +  GFD
Sbjct: 1   MRRLFAKLAIGAAALAFATVAQAGETLDRVMDKKAMVVATNSGWPPQSYLDDSNEMVGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   + +   +           + D+   +   T  R  +  + F  
Sbjct: 61  IDVSKEIAKRLGVE---VSFETPDWATLTGGRWQGRYDLGVGSVTPTKAR--AQVIDFAG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF---- 176
           I Y+    +++HK     SV+ L+G  I V+  TT+E  +    +       P+ +    
Sbjct: 116 IYYYSPYVYVLHKDSQAKSVADLNGKIIGVETATTSEDFIRRQLEIDAPGLPPVEYKLEP 175

Query: 177 ---ERVEEI---DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPL 226
                  +        R     R DA                      +L  +   + PL
Sbjct: 176 GEIRTFADSMLPFDDLRLGDGVRLDAVIAPE---QTAMNAIKNGYPLRVLDGEYAFREPL 232

Query: 227 APAIIQGDTEWYNIVSWTH 245
                + D +W   +    
Sbjct: 233 VVIAEKVDPDWTTKIGEIL 251


>gi|161523299|ref|YP_001578311.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189351929|ref|YP_001947557.1| polar amino acid transporter substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160340728|gb|ABX13814.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189335951|dbj|BAG45021.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 262

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 77/247 (31%), Gaps = 22/247 (8%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             ++I     L   +   +A           L+ G+      F     NG+ +GFD+D  
Sbjct: 7   LKLAIALACALGSAAAVADAQT---------LRFGLEAQYPPFESKAPNGELQGFDIDVG 57

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A+           +++  +      AL+ ++ D ++   + T  R     + F  I Y 
Sbjct: 58  NAVCE---TAKLTCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDFTTIIYR 112

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                I     G + +   L G  + V   +  E     +++   +    + ++   +  
Sbjct: 113 VPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVA--IVAYQDQNQAY 170

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWY 238
           A   A R DA      A     L+         +   +         +A  + +GD    
Sbjct: 171 ADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRKGDDALK 230

Query: 239 NIVSWTH 245
             +    
Sbjct: 231 AKLDAAI 237


>gi|76819835|ref|YP_336270.1| glutamate/aspartate periplasmic binding protein [Burkholderia
           pseudomallei 1710b]
 gi|167829459|ref|ZP_02460930.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei 9]
 gi|226196913|ref|ZP_03792491.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237509750|ref|ZP_04522465.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           pseudomallei MSHR346]
 gi|254265446|ref|ZP_04956311.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1710a]
 gi|76584308|gb|ABA53782.1| glutamate/aspartate periplasmic binding protein precursor
           [Burkholderia pseudomallei 1710b]
 gi|225930896|gb|EEH26905.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|235001955|gb|EEP51379.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           pseudomallei MSHR346]
 gi|254216448|gb|EET05833.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1710a]
          Length = 240

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
           +A  L  I     +        V F  +       GF  D   A+       +     +I
Sbjct: 15  HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y+P+  + R   L +   D+   +T  T  R     ++F    ++ G   ++ K   I 
Sbjct: 75  AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSISLFYAGTRVLVKKASRIR 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G ++   AG+T E  +  Y   H++    +  +          + R      D 
Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             L+ ++     P    +  D +   P    + +GD   
Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|257882917|ref|ZP_05662570.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884373|ref|ZP_05664026.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889304|ref|ZP_05668957.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260560085|ref|ZP_05832263.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207427|ref|ZP_05922113.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289566473|ref|ZP_06446898.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|257818575|gb|EEV45903.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257820211|gb|EEV47359.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825664|gb|EEV52290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260073920|gb|EEW62244.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078318|gb|EEW66023.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289161738|gb|EFD09613.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
          Length = 535

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%)

Query: 1   MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44
           M +      F   +  L+ L F          T+ S+ +  +  I+ K+       ++  
Sbjct: 36  MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F    A G+++G DV     ++         I+           AL+S Q D +    
Sbjct: 96  APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T  R+      F    +  G    + K    I S   L G ++  + GT +   L+D+
Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
              +        F+  +++    +    DA   D   +    +   +  E  I  +   K
Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVI-GYAIKQGQELETPIKKESGGK 267

Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
              A A+ +  + E  N+ +     +    E  
Sbjct: 268 --YAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298


>gi|254463985|ref|ZP_05077396.1| ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
 gi|206684893|gb|EDZ45375.1| ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
          Length = 258

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 17/224 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G       F  ++++G   GFDV+    L   I     +   +  +       L + 
Sbjct: 26  LRLGTEGAYPPFNYIESDGKIAGFDVEIGLELCKRIG---EECTVVAQDWDGIIPGLLAS 82

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAG 153
           + D +  +   T  R+    + F    Y      ++ K   I   +   L+G  I  Q+G
Sbjct: 83  KYDFIIASMFITEERKK--QVDFTDPYYLAAMTHVVPKGSDITEFTNEALAGKVIGAQSG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT     ADY +A        ++   +E++    + R D   GD+  +      +D  S 
Sbjct: 141 TTQ----ADYIEAAYPDADIRLYPTQDEVNLDMASGRIDLQVGDMLPMLDWTAKSDDGSC 196

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             +  D I+        +  A+ Q D      ++    A + A+
Sbjct: 197 CELAGDPITDPAFVGEGVGIAVRQEDDALREKLNTAL-AEIRAD 239


>gi|119961076|ref|YP_946399.1| amino acid ABC transporter [Arthrobacter aurescens TC1]
 gi|119947935|gb|ABM06846.1| amino acid ABC transporter [Arthrobacter aurescens TC1]
          Length = 273

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 80/247 (32%), Gaps = 16/247 (6%)

Query: 9   ILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           +  ++ L     ST +S         + + G ++         +    ++G++ GFDV+ 
Sbjct: 1   MAAILALSGCGGSTASSSPSAENPYGLIEPGTIRVASLGDSKPYTFTDSSGNFTGFDVEL 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + ++     D   + +   +      A+ + Q D+       T  R+ +  + F     
Sbjct: 61  FKDVAHRAGVD--NVVFTGQDFSGLLAAVANGQFDVGVAAIGITDKRKET--VDFSDGYL 116

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                 I  K  GI+    L+G  + V  GT  E      F +       + F       
Sbjct: 117 AGYLTVITTKTSGINDADGLNGKRLGVVQGTLQEAYAVKNFTSA----QLVRFPDNNTAI 172

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A  +   DA+  D     A K   ++             +P   AI +    +   ++ 
Sbjct: 173 SAVNSGSVDAHFLD---YEAAKEYQEQFGLVSAADIPSFDAPAGFAIAKDKPAFKEALNK 229

Query: 244 THYAMVT 250
                + 
Sbjct: 230 GLAEAME 236


>gi|146311623|ref|YP_001176697.1| extracellular solute-binding protein [Enterobacter sp. 638]
 gi|145318499|gb|ABP60646.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Enterobacter sp. 638]
          Length = 257

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
            L + +    SFS  A+          L+ G+      F    A+G+ +GFD+D  +A+ 
Sbjct: 5   ALVVGMGLLCSFSALAAT--------ELRYGLEAEYPPFESRNASGELEGFDIDLGKAIC 56

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
            A      K  ++  +       L +K+ D ++   + T  R     + F    Y     
Sbjct: 57  KAA---ELKCSWVETSFDALIPGLMAKKFDAINSAMNITDQR--RQSIDFTQPIYRIPSQ 111

Query: 129 FIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +     G+  +   L G SI V  G+  E    ++++ H      + ++          
Sbjct: 112 LVGKAGTGVEATPEGLKGKSIGVLQGSIQETYAKEHWEKHG--VTVVSYKDQNMAWGDLL 169

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVS 242
             R DA     +A  A  L+  +      +   +S        +   + +GD      + 
Sbjct: 170 NGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGDEATKKQLD 229

Query: 243 WTH 245
              
Sbjct: 230 AAI 232


>gi|254557735|ref|YP_003064152.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum JDM1]
 gi|254046662|gb|ACT63455.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum JDM1]
          Length = 267

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 22/256 (8%)

Query: 1   MY---KDFFVSILCL-IILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51
           M    K   V++L L + +  T+  +N S         ++K G L  G+      ++   
Sbjct: 1   MKSWVKKLGVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYR- 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GF+VD  +A++  +       +++P         L + + D++  N   T  R+
Sbjct: 60  KDGKLTGFEVDLGKAVAKKMGLKA---KFVPTKFDSLVAGLDTNKFDVVMNNMSETAARK 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F     +      + K   IS ++ + G      A TTT     D   A  +  
Sbjct: 117 K--KYLFSTPYIYSKSQLAVKKNSSISKITDIKGKK---VAETTTSNNATD---AKRLGA 168

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAI 230
                +  ++        R         + YA    N + +  +I   D I+   +   +
Sbjct: 169 TITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGVIV 228

Query: 231 IQGDTEWYNIVSWTHY 246
            +   +    +S    
Sbjct: 229 TKQHPKMQKQISKAIQ 244


>gi|186685028|ref|YP_001868224.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
 gi|186467480|gb|ACC83281.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme
           PCC 73102]
          Length = 271

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 92/244 (37%), Gaps = 15/244 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F++S   ++   FT+ +     + +I++RG+L   +   L       ANG+ +G ++D 
Sbjct: 22  IFWISCFSIVGTGFTASAAE---MPEIQQRGYLTVAVKDNLRPLGFRDANGNLQGLEIDL 78

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L+  +      ++  P+  ++R   +  K++D        T  R     ++F    Y
Sbjct: 79  AQRLALDLVGKTDAVKLQPVANRDRLSVVLDKKVDFAIARVTATESRSRI--VSFSVPYY 136

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            DG   +      ++ +S L+   I V   ++T   +  Y          +      E  
Sbjct: 137 LDGTVLVTKDAS-VNKLSDLAKQKIAVLNNSSTIAKVRFYLP----NAELVGVNSYHEAR 191

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIV 241
               ++   A+  D + L           ++ +LP  +S  PL+  + +     +    V
Sbjct: 192 EKIESNAAVAFAADATVLSGWVQQYP---QYQLLPTKLSTEPLSVVMPKGLQYDKLRRNV 248

Query: 242 SWTH 245
           +   
Sbjct: 249 NQAI 252


>gi|187923561|ref|YP_001895203.1| cationic amino acid ABC transporter periplasmic binding protein
           [Burkholderia phytofirmans PsJN]
 gi|187714755|gb|ACD15979.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia phytofirmans PsJN]
          Length = 264

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G+      F     +G+ +GFD+D   A+ + +    +K  ++  +      ALQ
Sbjct: 30  KEVHFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KAKCVWVENSFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ + ++ +   T  R     + F    Y      I  K  G + + + L G  + V  
Sbjct: 87  ARKFNAINSDMTITDQR--RQAVDFTDPIYTIPNQMIAKKGSGLLPTPASLKGKHVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +    +    + ++  ++I A   + R DA   D  A     L   + +
Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDAAFQDAEAASKGFLKKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
                   ++   L        + +GD    + ++          EL      I++ +  
Sbjct: 203 GFEFAGPAVTDEKLLGAGVGFGVRKGDKALKDALNQALK------ELKADGT-IDRFAAK 255

Query: 268 TTNPDV 273
             +  V
Sbjct: 256 YFDVKV 261


>gi|86357103|ref|YP_468995.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86281205|gb|ABC90268.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 264

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 11/211 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71
           I L   + +   + L  IK RG L  G+      F  +   +   KG+++D  +AL+  +
Sbjct: 3   ISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGYNLDIAKALADDL 62

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 +    +    R   LQ  ++DIL  N  +T  R   L     P     G   + 
Sbjct: 63  GVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP-YDRSGGAAVG 118

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  G+   + L G  +CV  G+     L + + A              E   A +   C
Sbjct: 119 RKDSGLKDWADLKGKPVCVSQGSNYTQPLIEKYGA-----EVKGLPSQPESLLALQGGNC 173

Query: 192 -DAYTGDISALYALKLTNDRPSEHVILPDII 221
             A     +    L+   +   ++ IL    
Sbjct: 174 VVAVHVGATLGLLLRDRPEDWEDYAILFPTE 204


>gi|55377279|ref|YP_135129.1| glutamine ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
 gi|55230004|gb|AAV45423.1| glutamine ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 262

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 77/249 (30%), Gaps = 18/249 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + +  +I   +     +   + S          L  G   G   F   + +G+  GFDV
Sbjct: 9   RRRYLQAIGGTVATLSVAGCQSDSG-----DSQTLTAGTAPGFPPFEMKQ-DGELVGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A+ +A   +     +  L  K    AL +  +D+++        R+    + F   
Sbjct: 63  ELLEAVVAA--TEYELSGWEELEFKSLIPALNNGNVDVVAAGMTINDERDK--AIDFSDP 118

Query: 122 TYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177
            Y   Q  I+ +      SS+  LS A++  Q GTT E  + D               + 
Sbjct: 119 YYSSNQAIIVRENGSFSPSSLEDLSEAAVGAQKGTTGESVIKDQLIEAGTIPESQYNAYG 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                         D    D     A     DRP +   + +          I  G+ E 
Sbjct: 179 NYVLAVEDLLNENVDVIIID--VPVANSFVADRPIKSAFVHETG--EQFGFGIQSGNDEL 234

Query: 238 YNIVSWTHY 246
              ++    
Sbjct: 235 AGALNSGLT 243


>gi|260425190|ref|ZP_05779180.1| glutamine ABC transporter, glutamine-binding protein [Dialister
           invisus DSM 15470]
 gi|260404444|gb|EEW97991.1| glutamine ABC transporter, glutamine-binding protein [Dialister
           invisus DSM 15470]
          Length = 271

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 66/208 (31%), Gaps = 13/208 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56
                V++   ++L  +    +A                L+ G       F     +G +
Sbjct: 8   KITLAVAMAAGLLLGVSGCGKSAEAEKQAPASKAGTEKVLRVGGEATYPPFLFKDEHGHY 67

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  +A++  I  +   + Y  +   +   A+++K++D++    + T  R      
Sbjct: 68  VGFEMDLIKAVAKEIGAE---VAYTDMPFSQFMTAVENKKVDVVISAVEGTAERAEKAAF 124

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +            +      I +   L G ++    G+T E                +  
Sbjct: 125 SDVYYKKGVYCILVRKDDDRIHAADDLKGKTVTAVKGSTNEA-----LAKKLGADQIVEA 179

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYAL 204
           E   +I     A + DA   D    Y  
Sbjct: 180 EYNADIFKNLEAGKADAVITDEPLAYYY 207


>gi|55378505|ref|YP_136355.1| amino acid ABC transporter amino acid-binding protein [Haloarcula
           marismortui ATCC 43049]
 gi|55231230|gb|AAV46649.1| amino acid ABC transporter amino acid-binding protein [Haloarcula
           marismortui ATCC 43049]
          Length = 266

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 13/248 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + +  ++    +    +                +  G   G   F   + +G+  GFD+
Sbjct: 8   RRQYLSTVGGTAVTVSLAGCFGGGGGNGGDGSTEITAGTAPGFPPFEMKQ-DGELVGFDI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+      D +   +     K    AL ++ ID+++        R+ +  + F   
Sbjct: 67  DLLEAVIDE--TDYTLAGWEEFEFKSLIPALTNENIDVVAAGMTINDERDET--IDFTDP 122

Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYF--KAHNMKYHPIVFE 177
            Y   Q  ++ +    S  S+S LSG  I  Q GTT E T+ D      +  + +   + 
Sbjct: 123 YYSSNQAIVVREDGDFSPASLSDLSGRPIGAQKGTTGETTVQDELISPGNLDESNYNSYG 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    +    DA   D     A      RP       +          +  GD E+
Sbjct: 183 NYVLAVEDLQNGNIDAVVIDEP--VAQTFAAQRPVTIAFTYETG--ENFGFGVRDGDDEF 238

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 239 TQALNDGL 246


>gi|300870918|ref|YP_003785789.1| family 3 extracellular solute-binding protein [Brachyspira
           pilosicoli 95/1000]
 gi|300688617|gb|ADK31288.1| extracellular solute binding protein, family 3 [Brachyspira
           pilosicoli 95/1000]
          Length = 244

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 82/243 (33%), Gaps = 24/243 (9%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           + F S S          K   L  G N     F       +  GFD+D    ++  +  D
Sbjct: 17  VAFMSCSA---------KENKLYVGTNAEFEPFEYRDGE-NIVGFDIDLINEIAKIMKQD 66

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I+ + +       ALQSK+IDI+         R+    + F    Y   Q  ++HK 
Sbjct: 67  ---IEVVDMAFDGLLPALQSKKIDIIIAGMTADEERKKF--VNFTDPYYSTQQSILVHKD 121

Query: 135 K-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I S   L G ++ V  G T +L ++          +   +    E   A ++ + DA
Sbjct: 122 NKDIYSFDNLEGKNVGVVLGFTGDLIVSAM-----SNVNAQKYGATSEAILALKSKKVDA 176

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              D     +     +   +  ++         A A+ + DTE    V+     +     
Sbjct: 177 VVLD-YEPASKYFDQNN--DLKLIITDSKSEEYAIAMRKEDTELLKKVNDALNTIKENGT 233

Query: 254 LGI 256
             +
Sbjct: 234 YDM 236


>gi|126457096|ref|YP_001076757.1| solute-binding family 1 protein [Burkholderia pseudomallei 1106a]
 gi|242312395|ref|ZP_04811412.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1106b]
 gi|126230864|gb|ABN94277.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein, truncation
           [Burkholderia pseudomallei 1106a]
 gi|242135634|gb|EES22037.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 1106b]
          Length = 240

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
           +A  L  I     +        V F  +       GF  D   A+       +     +I
Sbjct: 15  HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y+P+  + R   L +   D+   +T  T  R     ++F    ++ G   ++ K   I 
Sbjct: 75  AYIPVTRQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G ++   AG+T E  +  Y   H++    +  +          + R      D 
Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             L+ ++     P    +  D +   P    + +GD   
Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|227512685|ref|ZP_03942734.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227084150|gb|EEI19462.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 272

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 73/253 (28%), Gaps = 21/253 (8%)

Query: 2   YKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
            +   V  + L  +  T+         N +   ++K+   L  G+      ++    +G 
Sbjct: 8   KRSLLVVGIALAGVALTACGSSSSSSKNGTYRSELKQSKQLTIGLEGTYPPYSYR-KDGK 66

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF+V+  +A++  +        ++P         L S + D++  N   T  R     
Sbjct: 67  LTGFEVELGKAVAKKLGVKA---NFVPTKWDSLIAGLGSGKYDVVLNNITQTPERRK--Q 121

Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F     +     I       I + + +         G+  EL       A       +
Sbjct: 122 YLFSKPYVYSRYVLITRSGSNAIKTTADIKDKKFAEATGSDNELI------AKKFGAVIV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQ 232
             E+ +      +  R        SAL      N        L     + P  ++    +
Sbjct: 176 PQEQFQTSLDLIKQGRAQGAINAESALLTYAKDNSIKGLKYRLLKDSEQKPAKISGLFNK 235

Query: 233 GDTEWYNIVSWTH 245
              +  N  +   
Sbjct: 236 KSPKLKNKFNKVL 248


>gi|111017997|ref|YP_700969.1| ABC transporter, substrate-binding component [Rhodococcus jostii
           RHA1]
 gi|110817527|gb|ABG92811.1| ABC transporter, substrate-binding component [Rhodococcus jostii
           RHA1]
          Length = 307

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 76/245 (31%), Gaps = 16/245 (6%)

Query: 22  TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
             A+ L   I   G +  G+N           +G   GFDVD   A+S  +   P    Y
Sbjct: 55  AIAATLPEKIASSGKIIVGVNIPYSPNEFKDPSGKIVGFDVDLVDAVSKVLGVTPE---Y 111

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
              +  +   ++Q+   D+   +   T  RE    + F    +  G  +     K +   
Sbjct: 112 TEADFDKIIPSIQAGSYDMGMSSFTDTKERE--QSVDFT-TYFSAGVQWAQPAGKSV-DP 167

Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           +   G  + VQ  T  +        A    A       + F+  ++   A    + DA +
Sbjct: 168 TNACGLRVGVQTTTIEDLEEVPAKSAACVAAGKPPIEIVKFDSQDDAANAVALGKVDAMS 227

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D          +D   E     ++   +P    + +G       +      ++      
Sbjct: 228 ADSPVTAYAIKQSDGKIE--AAGEVFDAAPYGWPVAKGSP-LAQTLQQALQHLIDDGTYR 284

Query: 256 ITQKN 260
              +N
Sbjct: 285 TIAEN 289


>gi|253755502|ref|YP_003028642.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|251817966|emb|CAZ55746.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis BM407]
          Length = 732

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++ +FF            IK    +    +     F    ++  +KG D
Sbjct: 1   MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++       ++             A+Q+   D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +         K   ISS   L G ++ V+ GT  +  L +    +    +   F+  +
Sbjct: 108 PYFDTKIVIATTKVNTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D + +         
Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195



 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 314

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 430

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253
             D      L     +                  A+ +G + E   + +    A+V + +
Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487

Query: 254 LG 255
             
Sbjct: 488 YD 489


>gi|329922367|ref|ZP_08278044.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328942230|gb|EGG38501.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 480

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 93/283 (32%), Gaps = 25/283 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M + F  ++++  +++L F S            ++  +  G +     +     +     
Sbjct: 1   MKRKFTAWMTLFMVVVLSFGSLVHAEG------EKKTVILGTSADYAPYEFHKTIDGVDT 54

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + ++  +  +   +     +       L S ++D +    + T   +    
Sbjct: 55  IVGFDIDIAKEIAKDLGAE---LIIKDTSFDALLPELTSGRVDFVISGMNPTE--DRRKS 109

Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    Y   Q  ++ K+  +  +++  L GA I VQ  +  E        A+      
Sbjct: 110 IDFSEPYYAAEQSVVVRKEDAQKFNTLESLEGARIGVQKSSIQESIAKTIPNAN-----V 164

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +++ ++     + R D    +                             A  + +G
Sbjct: 165 VSLDKIPDLLLQLESERVDVVLAEYPIAKTNMNEAT--MVITDAKPTAENDTYAIGVRKG 222

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
           + E    ++ T   +    ++     + + ++   T  ++  F
Sbjct: 223 NEELLGSINATLERLKENNQIQKFVDDASDLAAGRTAENLNTF 265


>gi|222102794|ref|YP_002539833.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739395|gb|ACM40128.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 272

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 81/256 (31%), Gaps = 29/256 (11%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               S L   +L   + S   +      + G L+ G       F+   ANG+  GFD D 
Sbjct: 5   KIIQSTLASTLLLIAATSAAYA------EEGVLRIGTEGDAPLFSMADANGNVTGFDADI 58

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              + + +     K +++         ++ S + D++      T  R     + +     
Sbjct: 59  ANGICAEL---KVKCKFVVQAFSSLIPSMDSDRFDVIISGLGITEERAK--KIDYSIPYA 113

Query: 124 FDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                F++ K   ++ +         L+G S+ V  GTT    +               +
Sbjct: 114 TTPLYFVVPKSSPLAGLKSLTEIEKSLTGKSVGVVTGTTYAKFIEKRIP----GADLKTY 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSP------LAPA 229
           +   +  A   + R DA  GD         + D  +   I +  +    P      +   
Sbjct: 170 DATTQQTADLASGRLDAAFGDSPTWMDFLASADGANFTKIDVKIMSMDDPDVLGHGMGVG 229

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G++     V    
Sbjct: 230 MRKGNSALKAKVDAAL 245


>gi|325284209|ref|YP_004256750.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           proteolyticus MRP]
 gi|324316018|gb|ADY27133.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           proteolyticus MRP]
          Length = 279

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 66/196 (33%), Gaps = 12/196 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + ++  + +  I+K G L+   +     +       +  GFDVD   AL+  I  + 
Sbjct: 42  TAAAPASGGACMERIRKDG-LRVITSPDYPPYESTNEQNEIVGFDVDMVNALAQEIGVEA 100

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKK 134
              ++          +L S + D+++     T  R     +AF           ++  K 
Sbjct: 101 ---KFTGQGFDGLIPSLISGRADLIAAGLTMTEERAK--SVAFSDPYEETKNVIVVSAKD 155

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I   + L+G ++ VQ GT           A         F    E  AA ++ + D+ 
Sbjct: 156 TAIKDAATLNGKTVGVQLGTVQADVAEKIAGA-----DVRTFNLFSEALAALKSGQIDSM 210

Query: 195 TGDISALYALKLTNDR 210
             D  A       N  
Sbjct: 211 IVDAPAGQNYVKANSD 226


>gi|296271865|ref|YP_003654496.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096040|gb|ADG91990.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 311

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 70/241 (29%), Gaps = 14/241 (5%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M    F      ++  ++      +  A +L DIK +G +          F  +  +G  
Sbjct: 28  MKSILFPFQKTLLVASLVCTTFVHTAQADLLEDIKAKGEIVIATEARYAPFEML-KDGKI 86

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D D    +   +           L  +     L +K+ D +      T  R      
Sbjct: 87  VGYDEDILHEILKDLPGVKLTQL--DLPFQGILTGLSAKRYDFVVTALTLTKKR--MDKY 142

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK---YH 172
           AF           +  K    I S   ++G  + +Q G+    T+  Y KA   K     
Sbjct: 143 AFTYPISTASLVILKRKGDDRIKSPKDMAGMILGIQRGSAQLKTIKAYEKAELSKKGYKK 202

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              F    E   A  + R D     +  L ++          ++ P             +
Sbjct: 203 IKEFTDYNEAYTALASGRVDVVPQALPNLASVVKERSD-IFEIVRPSFGPDLYYGWVGRK 261

Query: 233 G 233
            
Sbjct: 262 D 262


>gi|294498827|ref|YP_003562527.1| sulfur-containing amino acid ABC transporter sulfur-containing
           amino acid-binding protein TcyK [Bacillus megaterium QM
           B1551]
 gi|294348764|gb|ADE69093.1| sulfur-containing amino acid ABC transporter, sulfur-containing
           amino acid-binding protein TcyK [Bacillus megaterium QM
           B1551]
          Length = 273

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 14/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K    +I   ++L   +           +    ++K   +  G  T       +   G
Sbjct: 1   MKKLQLTAIFLSLLLLLAACGTPNKETAANASKDKVQK---IIVGTGTQFPNICFLDDKG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DV+  + +   +     K ++  ++     L+L+S +ID+++   +    R+   
Sbjct: 58  NLTGYDVELVKEIDKRL--PNYKFEFKTMDFSNLLLSLESNKIDLVAHQMEVNEERKQKF 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                P   F     +  K   I S+  L+G  + V A + +   +  Y K H  K + +
Sbjct: 116 LFNKEPYNIFPLHVVVNEKNTSIKSIKDLNGKKVIVGATSNSANLIDKYNKEHGNKINIV 175

Query: 175 VFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +  ++     +  R DA T                 + V+ P I +       + + 
Sbjct: 176 YSGQGSDDTKTQLKTGRADA-TISTPFAVDFVNKQADAEQKVVGPAISNSKVY-FMLRKN 233

Query: 234 DTEWYNIVSWTHYAMVT 250
           +T     V      +  
Sbjct: 234 ETGLQKDVDKALKEIKE 250


>gi|237751714|ref|ZP_04582194.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
           [Helicobacter bilis ATCC 43879]
 gi|229373080|gb|EEO23471.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
           [Helicobacter bilis ATCC 43879]
          Length = 257

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 20/259 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK--KRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     +     LFF + S       ++       L+ G+N     F   +      G
Sbjct: 1   MKK-ILSLLCVSFALFFVACSK-----EEVCGGNDKELRVGLNAEYPPFEYKQDA-KIIG 53

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+S  +  +        ++      AL++ +ID++  +   T  R     + F
Sbjct: 54  FDIDMLDAVSKKVGFNY---TLNHMSFDGLIPALKACKIDMIISSMSATQER--MKQVDF 108

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Y     +I  K    I     + G  + V  GT  E         +N+K   ++ E
Sbjct: 109 SIPYYEGETLYIKRKDSADIVDKDSIKGKKVGVFLGTVQEQAAQKMKDEYNIK--VVMSE 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-E 236
            +       ++ + D    D +        N+         +      L+ A  +G   E
Sbjct: 167 SILGAILNLKSGKVDVALADYATAQGYLKENEELIGFYH--EKDGSEGLSIAFDKGKHAE 224

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++     +  + E  
Sbjct: 225 LLAKINEAIKELKESGEYD 243


>gi|227509740|ref|ZP_03939789.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190664|gb|EEI70731.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 310

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 73/253 (28%), Gaps = 21/253 (8%)

Query: 2   YKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
            +   V  + L  +  T+         N +   ++K+   L  G+      ++    +G 
Sbjct: 46  KRSLLVVGIALAGVALTACGSSSSSSKNGTYRSELKQSKQLTIGLEGTYPPYSYR-KDGK 104

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF+V+  +A++  +        ++P         L S + D++  N   T  R     
Sbjct: 105 LTGFEVELGKAVAKKLGVKA---NFVPTKWDSLIAGLGSGKYDVVLNNITQTPERRK--Q 159

Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F     +     I       I + + +         G+  EL       A       +
Sbjct: 160 YLFSKPYVYSRYVLITRSGSNAIKTTADIKDKKFAEATGSDNELI------AKKFGAVIV 213

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQ 232
             E+ +      +  R        SAL      N        L     + P  ++    +
Sbjct: 214 PQEQFQTSLDLIKQGRAQGAINAESALLTYAKDNSIKGLKYRLLKDSEQKPAKISGLFNK 273

Query: 233 GDTEWYNIVSWTH 245
              +  +  +   
Sbjct: 274 KSPKLKDKFNKVL 286


>gi|89100886|ref|ZP_01173736.1| Periplasmic amino acid binding protein [Bacillus sp. NRRL B-14911]
 gi|89084422|gb|EAR63573.1| Periplasmic amino acid binding protein [Bacillus sp. NRRL B-14911]
          Length = 262

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 29/250 (11%), Positives = 67/250 (26%), Gaps = 20/250 (8%)

Query: 4   DFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
                 L + +    S        + + S+   IK++G +  G       F      G  
Sbjct: 2   ILLTFALAISLAACGSSGDGDKDTAKDQSLYDQIKEKGEITIGTEGTYAPFTYHDKEGKL 61

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD++    +   +   P    ++          L +K+ D+++         +     
Sbjct: 62  TGFDIEIAEEVFKRLDIKP---VFVETKWDGMIAGLDAKRYDLVANEVAV--REDRLEKY 116

Query: 117 AFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                         +      I ++  L G  +      + +       + H      + 
Sbjct: 117 DMSDPYIVSKAVLIVHENNDEIKTLDDLDGKKVG----QSLDSNYRKIAEEHGATNTVVE 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                +      + R DA T + S  Y              + +  + +  A    +G  
Sbjct: 173 --GFNQSIDLITSGRIDA-TLNDSLSYLDLKKQRPELPVKTVYEEENATSNAFLFRKGSD 229

Query: 236 EWYNIVSWTH 245
           +    V+   
Sbjct: 230 DLVEAVNGAL 239


>gi|209518287|ref|ZP_03267113.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209501307|gb|EEA01337.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 286

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 81/247 (32%), Gaps = 11/247 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62
               +I+    L   S +     L  I  R  +  G+      F  +       +G +VD
Sbjct: 16  SLLTAIVTSFALAAISPAYADQTLDKINARHEIAVGVMISGSPFGSLDPQTQQPRGMNVD 75

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   +      +Q + +    R   LQ  ++DIL  N ++   R   L     P  
Sbjct: 76  LANDIGKRLGVK---VQLVSVQPSTRVQFLQQGKVDILIANMEYNAQRGEILDHVPTPYY 132

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              G      K  GI+    L G  +C+  G++    + + + A      P  F    + 
Sbjct: 133 RVGGTAI-TPKSSGITKWEDLRGKPVCISQGSSYIRPVVEKYGA-----VPRAFPGAPQS 186

Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             A R   C A   D    LY L+  +    ++  L   +  +P    + QG+ +    +
Sbjct: 187 LLALRGGSCVAAVHDAAPLLYPLQQHDPEWRDYRTLQPELEPAPSVIWVRQGEKDTAAKL 246

Query: 242 SWTHYAM 248
                  
Sbjct: 247 DAIVRDW 253


>gi|83589974|ref|YP_429983.1| extracellular solute-binding protein [Moorella thermoacetica ATCC
           39073]
 gi|83572888|gb|ABC19440.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Moorella thermoacetica ATCC 39073]
          Length = 284

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 68/220 (30%), Gaps = 14/220 (6%)

Query: 38  CGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             +      F       G++ GFD+D  +A+      D   +    +       ALQ+  
Sbjct: 53  VALEATFAPFEFRDMKTGEFTGFDIDLIKAIGQVEGFD---VDIKEMGFDGIITALQTNN 109

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTT 155
           +D+          R+    + F    Y  G    +      I     L G  I VQ  TT
Sbjct: 110 VDLAISGISIDDERKK--AVDFSLPYYQSGLVVAVKADNNTIKGFDDLKGKKIAVQINTT 167

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +         A          ++V ++    +    DA   D+          +   +  
Sbjct: 168 SAKEAKKIPGAM-----VTELDKVPDMFLELKNGGVDAVVNDLPVTAYYIKQGNN--DVK 220

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           I+ DI S      A+ +G TE    ++    A+    +  
Sbjct: 221 IVGDIRSAEYYGIAVPKGKTEILQKINDGLKAIKANGQYE 260


>gi|152987979|ref|YP_001345802.1| putative ABC transporter binding protein subunit [Pseudomonas
           aeruginosa PA7]
 gi|150963137|gb|ABR85162.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PA7]
          Length = 256

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 19/239 (7%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+++   +   +A +L D+ +RG L+  +      F   +  G   GF+ +    L++ 
Sbjct: 7   LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +   P    ++          LQS + DI          R       F           I
Sbjct: 66  LKVRPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSAPYTISSAQLI 120

Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +   +     S+  L G  + V  GT                 +   +    E      +
Sbjct: 121 VRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175

Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R DA   D         +          + P      P      + + ++   +    
Sbjct: 176 KRIDAALNDRLLIPFAIREARLPVKPGAAVGPVANMAIPY----RKNNPKFGEALDAAL 230


>gi|88856306|ref|ZP_01130965.1| secreted protein [marine actinobacterium PHSC20C1]
 gi|88814390|gb|EAR24253.1| secreted protein [marine actinobacterium PHSC20C1]
          Length = 305

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 66/231 (28%), Gaps = 12/231 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             I++ G +  G       + +    +    G D D   A+   +  +   I+   +   
Sbjct: 56  DRIQESGVITVGTEAYYPPYESFADDDSTIIGLDPDLLHAIGDVLGVE---IKLENMAFD 112

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLS 144
               AL +K++DI+S         +      F    +   QG  +       + +   L 
Sbjct: 113 GLLPALDAKRLDIVSAALTINA--DRVEKYDFV-TYFNTPQGITVPADNPKGVKTRDDLC 169

Query: 145 GASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           G ++ V   +     L         + +     F    +     ++ R DA         
Sbjct: 170 GLNVAVLDASHQLSLLEAMNADLCADNEMTITAFTSDADALQQLQSGRADASISQYPVAA 229

Query: 203 ALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                         + D     S L     + D++  + V      ++ + 
Sbjct: 230 FSAANFGNGKIFTAISDASFGPSLLGEVFRKDDSQLRDAVQAAINDLIESG 280


>gi|253751794|ref|YP_003024935.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis SC84]
 gi|253753617|ref|YP_003026758.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|251816083|emb|CAZ51704.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis SC84]
 gi|251819863|emb|CAR45878.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis P1/7]
 gi|319758142|gb|ADV70084.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           JS14]
          Length = 732

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++ +FF            IK    +    +     F    ++  +KG D
Sbjct: 1   MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++       ++             A+Q+   D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +         K   ISS   L G ++ V+ GT  +  L +    +    +   F+  +
Sbjct: 108 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D + +         
Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 314

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 430

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253
             D      L     +                  A+ +G + E   + +    A+V + +
Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487

Query: 254 LG 255
             
Sbjct: 488 YD 489


>gi|289829988|ref|ZP_06547439.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 239

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 26/251 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ G      L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGNNASAHLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           R +   GD   + A+        ++ I+ +  S           A+ +G+      ++  
Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219

Query: 245 HYAMVTAEELG 255
              +  + E  
Sbjct: 220 LDKVKASPEYA 230


>gi|209519716|ref|ZP_03268504.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209499860|gb|EDZ99927.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 248

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 11/201 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L    +T  V F   + +  + GFD+D   A++  +  D    +  P++      ALQ+
Sbjct: 26  TLLVACDTAFVPFEFKQGD-KYVGFDIDLWEAIAKDLKLDY---KLQPMDFSGILPALQT 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +D+          R+    + F    Y  G   ++     I+    L G S+ ++ GT
Sbjct: 82  HNVDVALAGITIKDERKKV--IDFSDGYYDSGFTLMVPATSTINGPDDLKGKSLAIKTGT 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           +     ADY KAH        F  ++      +  R DA   D   +     T  +    
Sbjct: 140 SA----ADYAKAHFAGTDLRQFPNIDNAYLELQTGRVDAAMHDTPNVLYYINTAGKGHVK 195

Query: 215 VILPDIISKSPLAPAIIQGDT 235
            + P  +          +G  
Sbjct: 196 AVGPQ-MMAQQYGIGFPKGSP 215


>gi|226306803|ref|YP_002766763.1| amino acid ABC transporter amino acid-binding protein [Rhodococcus
           erythropolis PR4]
 gi|226185920|dbj|BAH34024.1| putative amino acid ABC transporter amino acid-binding protein
           [Rhodococcus erythropolis PR4]
          Length = 322

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 14/210 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +   G L+ G+N          A+G+  GFDVD   A+++ +  +     +   +  + 
Sbjct: 78  KVTDSGKLQVGVNIPYAPNEFKDADGNIVGFDVDLMNAVAAVLGVEA---VFNQADFDKI 134

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             A+QS   D+   +   +  RE +  + F        Q     +       +   G  +
Sbjct: 135 IPAIQSGSYDLGMSSFTDSKEREKT--VDFVTYYSAGIQ--WAQRPDKPVDPNNACGLRV 190

Query: 149 CVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            VQ  TT +                     I ++  ++   A    R DA + D      
Sbjct: 191 AVQTTTTEDIDEVPAKSEVCVAEGKPPIDKIKYDSQDDAANALILGRVDALSADSPVTGY 250

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               +          +    +P    I++G
Sbjct: 251 AIKRSK--GRMEAAGEPFDSAPYGWPIVKG 278


>gi|146280414|ref|YP_001170567.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas stutzeri A1501]
 gi|145568619|gb|ABP77725.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas stutzeri A1501]
 gi|327478630|gb|AEA81940.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 285

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 79/274 (28%), Gaps = 13/274 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   ++   L  + F S +  A  L  IK    ++ G       FA    +G   G   +
Sbjct: 11  RRLLIACAALASIGFASVT-QADTLEKIKDSNSVRIGYANET-PFAYTALDGSVTGESPE 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R +   +  +   I+ +          L++ + D+++     T  R   +        
Sbjct: 69  IVRKVFERM--EIGTIKPVLTEWGSLIPGLRAGRFDLIAAGMYITPERCKQVLFTDPHYR 126

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             D         K + S   ++G      A  +  + L    KA       +        
Sbjct: 127 LLDTLLVAQGNPKELRSYEDIAGNPEVKIAIMSGTVNLGYARKAGIKDSQILQVPDTTSQ 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWYNI 240
             A R+ R DA  G    +  L        E       D       A A    D    + 
Sbjct: 187 LQAVRSGRADAAIGTQLTMRGLAAKASNDVEAIADFEDDPARAGYGALAFRPQDEALRDA 246

Query: 241 VSWTHYAMVTAEE-------LGITQKNINQVSKD 267
           V+      + +EE        G  + N+   +  
Sbjct: 247 VNAELKQWLGSEEHLKAVEPFGFDRSNLTDKTAA 280


>gi|182436030|ref|YP_001823749.1| putative arginine/ornithine binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326776654|ref|ZP_08235919.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
 gi|178464546|dbj|BAG19066.1| putative arginine/ornithine binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326656987|gb|EGE41833.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 320

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 74/238 (31%), Gaps = 20/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              +K G +K G N        V  NG   G D D   AL   +     + ++   +   
Sbjct: 61  EKYQKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDIAEALGKQLG---VRFEFTSGSFDG 116

Query: 88  RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHK--KKG 136
              AL S + DI   +      R+            G+ F    +  G      K   + 
Sbjct: 117 LITALNSGRHDIAMSSITDNKQRQEGLDDSGKKLGEGVDFVD-YFLAGTAVYTKKGNPQN 175

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCD 192
           I S+  L G    VQ GTT E  L    KA             FE   E     ++    
Sbjct: 176 IKSIEDLCGKPAAVQRGTTYEEALKKQSKACTDGGEKAIKIESFENDTEAQTRVKSGGSV 235

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A   D      L    D      ++ + +   P   A+ + +T   + +     A++ 
Sbjct: 236 AGVNDYPVAVDLARKADGGKAFEVVGEQVDAGPFGIAVKKDNTGLRDALKEAVDAIIA 293


>gi|270307789|ref|YP_003329847.1| amino acid ABC transporter, periplasmic binding protein
           [Dehalococcoides sp. VS]
 gi|270153681|gb|ACZ61519.1| amino acid ABC transporter, periplasmic binding protein
           [Dehalococcoides sp. VS]
          Length = 260

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 14/217 (6%)

Query: 36  LKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +    +     F  V       +GFD+D  +A++        ++ +  +        + +
Sbjct: 41  VTVVTDATWAPFEYVNEQTHAIEGFDIDLMKAIAEKA---NLEVTFQNVAWDALLAGMAT 97

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            Q  +   +   T  R       F    +  GQ   + K    I S + L+G  +  Q G
Sbjct: 98  GQYKVAISSITITAERAE--KWLFSDPYFNAGQMVCVQKNNTTILSHNDLTGKKVAAQTG 155

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT  +       A         ++ +          + DA   D     A+   N  P +
Sbjct: 156 TTGFIEAQKIEGA-----TVKSYDEIGLAFQDLMNGQIDAVICDTP--VAIDYVNANPDK 208

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              +    +      ++ +G TE    ++    A++ 
Sbjct: 209 IKKVGTAFTDEYYGISVAKGQTEILARINQGLAAVIA 245


>gi|254975775|ref|ZP_05272247.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-66c26]
 gi|255093162|ref|ZP_05322640.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile CIP 107932]
 gi|255314904|ref|ZP_05356487.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-76w55]
 gi|255517578|ref|ZP_05385254.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-97b34]
 gi|255650689|ref|ZP_05397591.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-37x79]
 gi|260683776|ref|YP_003215061.1| putative amino-acid ABC transporter substrate-binding protein
           [Clostridium difficile CD196]
 gi|260687436|ref|YP_003218570.1| putative amino-acid ABC transporter substrate-binding protein
           [Clostridium difficile R20291]
 gi|306520614|ref|ZP_07406961.1| putative amino-acid ABC transporter, substrate-binding protein
           [Clostridium difficile QCD-32g58]
 gi|260209939|emb|CBA63913.1| probable amino-acid ABC transporter, substrate-binding protein
           [Clostridium difficile CD196]
 gi|260213453|emb|CBE05130.1| probable amino-acid ABC transporter, substrate-binding protein
           [Clostridium difficile R20291]
          Length = 267

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 88/248 (35%), Gaps = 12/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L L++    +  ++ +     +++  ++   +     FA    +   KGF+
Sbjct: 1   MKKLKLIIMLALVLALLITGCSSGNNKNK-EEQKTIRVATSGTYYPFAFKDKD-KLKGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF    +         ++++  +    F  L++ + D++S     T  RE     AF  
Sbjct: 59  VDFWDEFAKRTNCK---VEWVLTDFSGLFGLLEADKADVVSAQLTATPEREK--KYAFSD 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   I+ +    I S+  L G  + V  G      L + +    +K        +
Sbjct: 114 AYNYSGTNIIVREDDTSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKIVNYSSATL 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237
           +         R DA       + AL    ++     ++   I     + AI + +   +W
Sbjct: 174 KGNYQDLEMGRLDAVVAQD--VEALIAIKEQKLNLKMVEPPIQFGACSFAIQKNEKGEKW 231

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 232 TKEINEVI 239


>gi|308181821|ref|YP_003925949.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|308047312|gb|ADN99855.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 267

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 22/256 (8%)

Query: 1   MY---KDFFVSILCL-IILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51
           M    K   V++L L + +  T+  +N S         ++K G L  G+      ++   
Sbjct: 1   MKSWVKKLGVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYR- 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   GF+VD  +A++  +       +++P         L + + D++  N   T  R+
Sbjct: 60  KDGKLTGFEVDLGKAVAKKMGLKA---KFVPTKFDSLVAGLDTNKFDVVMNNMSETAARK 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F     +      + K   IS ++ + G      A TTT     D   A  +  
Sbjct: 117 K--KYLFSTPYIYSKSQLAVKKNSSISKITDIKGKK---VAETTTSNNATD---AKRLGA 168

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAI 230
                +  ++        R         + YA    N + +  +I   D I+   +   +
Sbjct: 169 TITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIV 228

Query: 231 IQGDTEWYNIVSWTHY 246
            +   +    +S    
Sbjct: 229 TKQHPKMQKQISKAIQ 244


>gi|293396874|ref|ZP_06641148.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
 gi|291420345|gb|EFE93600.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Serratia odorifera DSM 4582]
          Length = 255

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 75/208 (36%), Gaps = 12/208 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           ++    L+   +     F  + AN    GFD+D  +AL   +    ++  +         
Sbjct: 29  VQAAETLRFASSATYPPFESLDANNQIVGFDIDLAKALCKQM---QTECTFTNQAFDSLI 85

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
            AL+ K+ D +    D T  R  S  ++F    Y +    I  K    ++++ L G  + 
Sbjct: 86  AALKFKKYDAVISGMDITPER--SKQVSFTQPYYANSAIVIAQKG-KYATLADLKGKKVG 142

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           ++ GTT +  + D         + + ++  +      +  R D   GD + +     +N 
Sbjct: 143 MENGTTHQKYMQDKHPE----INTVAYDSYQNAILELKNGRVDGVFGDTAVVNEWLKSNP 198

Query: 210 R--PSEHVILPDIISKSPLAPAIIQGDT 235
              P    I       + L  A+   + 
Sbjct: 199 NLAPVGEHITDAQYFGTGLGIAVRPDNQ 226


>gi|284043463|ref|YP_003393803.1| extracellular solute-binding protein family 3 [Conexibacter woesei
           DSM 14684]
 gi|283947684|gb|ADB50428.1| extracellular solute-binding protein family 3 [Conexibacter woesei
           DSM 14684]
          Length = 302

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 8/207 (3%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             I+ +G L    +        V  +G    G DVD  +A+   +  D   ++       
Sbjct: 59  EAIRSKGKLVVATDPTYAPNEFVDRDGKTIIGMDVDLAKAIGQQLGLD---VEVQKATFD 115

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
                L +++ D+   +   T  RE    + F          ++      I+++  + G 
Sbjct: 116 AIIPGLAARRYDLGMSSF--TDTRERERTVDFVTYFNAGTSFYVRTGGPDITTLEDVCGE 173

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            + V+ GTT  + +    ++ +      V+      + A ++ R D      S + A  +
Sbjct: 174 KVAVEKGTTQAMDVQRQNRSCDTPADLQVYPDQNGANLAIQSGRAD-VGMADSPVAAYIV 232

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233
                 +  +  +    +P   A+ +G
Sbjct: 233 KQSNG-QFRLDGEPYGTAPYGIAMPKG 258


>gi|120608918|ref|YP_968596.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120587382|gb|ABM30822.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 274

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 8/179 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L +I+K G ++  I      F  +  +   +G+D+D    ++  +      ++ +P+ 
Sbjct: 39  DVLANIQKAGVVRVAIPQDFPPFGSLGTDLKLQGYDIDMANLVAKELGVK---VELVPVT 95

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           +  R   L + + D++  +      R     + F        +     K+  I   + L+
Sbjct: 96  STNRIPYLTTGKADLVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKEAAIKGPADLA 153

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           G +I V  G+T +L+L     A         +E       +Y   +    T       A
Sbjct: 154 GKTIGVTRGSTEDLSLTKLAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVANA 209


>gi|225868288|ref|YP_002744236.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701564|emb|CAW98789.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 721

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 17/211 (8%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M        +  L ++  T+   +A  +  +          +T    F    ++  +KG 
Sbjct: 1   MKNTLKAWMLAMLSVVLMTAGIASAETIDIV---------SDTAYAPFEFKDSDQVYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++     +   I            A+QS Q D L   T  T  R+      F 
Sbjct: 52  DVDIINEVAKRKGWN---INMTFPGFDAAVNAIQSGQADALMAGTTITAARQKV--FHFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y         K   I   S+L G ++ V+ GT  +  L  Y K++        F+  
Sbjct: 107 DPYYDTKIVIATRKASPIKKYSELKGKTVGVKNGTAAQAFLDKYKKSYGY--TVKTFDTG 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + +  +      DA   D   +         
Sbjct: 165 DLMYNSLATGSIDAVMDDEPVIQYAINQKQD 195



 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 11/222 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
             K   ++    F     +G++ G D+D  +A++         I+           A+Q+
Sbjct: 271 VYKIVADSSFAPFEFQIGSGEYVGIDMDLIKAIAKQ---QGFTIEISNPGFDAALNAVQA 327

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R       F    Y       +     I S   L G  +  + GT
Sbjct: 328 GQADAVIAGMSITPAR--REIFDFSDSYYTSNIRLGVKSGSSIKSYKDLKGKIVGAKKGT 385

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L      +        F+    +  +  +   D    D      L+    R  + 
Sbjct: 386 ASYDFLESNKDIYGY--RLKAFDEASSMYDSLNSGSIDGLMDDE---AILRYAIQRGHKL 440

Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255
            I            A+ +G + E   + +    A+  + +  
Sbjct: 441 DIPIKGEPSGEYGFAVKKGANPELIEMFNNGLAALKASGKYD 482


>gi|27379672|ref|NP_771201.1| cyclohexadienyl dehydratase [Bradyrhizobium japonicum USDA 110]
 gi|27352824|dbj|BAC49826.1| probale cyclohexadienyl dehydratase precursorr [Bradyrhizobium
           japonicum USDA 110]
          Length = 260

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 82/260 (31%), Gaps = 13/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57
           M   F  ++   +++  ++ +  A  S L +I KRG L+ G+      F  +  A   + 
Sbjct: 1   MTVRFLSALAVALLMNLSAHAQQAAPSRLDEIMKRGTLRVGMTGDYKPFTYLDKATQQFS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL  A+      ++++P    +     ++ Q DI       TL R+     +
Sbjct: 61  GFDVDMAEALGKALGVK---VEFVPTAWPKLMKDFEADQFDIAMGGVSVTLDRQRKGFFS 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIV 175
              +                 ++  +   G  + V  G T E     + +A+       V
Sbjct: 118 MPIMREGKTPIARCADVGKYQTLPDIDKKGTRVIVNPGGTNE----RFARANIKDADITV 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F     I         D    D S     +  +      V        S  A  + Q D 
Sbjct: 174 FADNTVIFDEIAKGNADLMMTDASETRYQQKQHQGVLCAVHPEKPFDFSEKAYWL-QRDM 232

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                V    +  +      
Sbjct: 233 ALKAFVDQWLHISMEDGSYR 252


>gi|116492831|ref|YP_804566.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus pentosaceus ATCC 25745]
 gi|116102981|gb|ABJ68124.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 483

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 83/274 (30%), Gaps = 25/274 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K     +  ++ILF  S   + ++  D K     + G +     F        + G D+
Sbjct: 5   KKTLLSIVFSIVILFGWSVFNSNNVNADEK---VYEIGTDVTFPPFEFANDQNQYVGIDM 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R ++    ++  K++  P+       AL + Q+D +   T  T  R+    + F   
Sbjct: 62  DIIRTIAK---NEGFKVKIKPVGFNAAVQALDAGQLDGVIAGTTITDERK--QKMDFSAP 116

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  G    + +   I +   L G  + ++ GT          K +  K   + F+    
Sbjct: 117 YFKTGVVMAVGQNSSIKNFQDLKGKRVAIKTGTAAGDYAKSIQKKYGFKT--VTFDDSNN 174

Query: 182 IDAAYRAHRCDAYTGDISALYALK---------LTNDRPSEHVILPDIISKSPL------ 226
           +          A   D   +                     +           L      
Sbjct: 175 VYNDVTTGNSVACFEDQPVMQYAIKTGAKLKIVTKPANGGAYGFSVKKGHNQELLKKFDA 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
               I+ + ++  IV+    A   A +     +N
Sbjct: 235 GLKKIKSNGQYKKIVAKYLGASAVASQKAHKTQN 268


>gi|241894752|ref|ZP_04782048.1| glutamate superfamily ATP binding cassette transporter, membrane
           protein [Weissella paramesenteroides ATCC 33313]
 gi|241871964|gb|EER75715.1| glutamate superfamily ATP binding cassette transporter, membrane
           protein [Weissella paramesenteroides ATCC 33313]
          Length = 483

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 23/278 (8%)

Query: 1   MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K     +  + +      +S + +A+               +T    F     NG ++
Sbjct: 1   MRKWLISLMALVGLAVGIVVSSPAVHAATPNY-------TITTDTTFPPFEFQTDNGKYR 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D  + +S     +       P++      A+Q+ Q+D +      T  R+      
Sbjct: 54  GIDMDMLKEISKR---EHFTYTLKPMSFNAGVQAVQAGQVDGIVAGMSITDERK--NTFD 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G    + +K  I  +S L G ++  + G+       +  K +  K     F 
Sbjct: 109 FGTPYYKSGIVMAVSQKSKIKGLSDLKGKTVAAKTGSAGADYAREMSKKYGFK--VTFFN 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAII 231
               +          A   D   +               P++       + KS  A  + 
Sbjct: 167 DSNTMYNDVLIGNTVAVFEDQPVMAYAIQQGTNLKIVTKPAKGNWYGFGVKKSANAELLK 226

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           + +  +  IV    Y  +    LG    N  + + + T
Sbjct: 227 KFNAGYAEIVKDGTYDKIVNRYLGKGGYNYKKNAANQT 264


>gi|239979644|ref|ZP_04702168.1| bifunctional protein [Streptomyces albus J1074]
          Length = 640

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 79/239 (33%), Gaps = 5/239 (2%)

Query: 19  SFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           + +         +     L+ G+       +  + +G+++GFD+    A++ A+  +   
Sbjct: 380 AATAAEKRWEKWRSDNEVLRVGVKKDQPQLS-EEKDGEYQGFDISMALAIAKALGYEKGD 438

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           + ++P+N + R   L +K+  ++  +   T  RE    + F    +  G+ F++ +K   
Sbjct: 439 VLFVPVNTENRSTMLDNKRAHLIVASYSITDEREK--EVDFVGPYFRAGRTFLVREKSTQ 496

Query: 138 SSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             +   +          T    T   + K    K +       E           D Y  
Sbjct: 497 YDLRSAADIKQKDVRVCTAAHSTYERHLKEGGYKAYAPQPASYETCVDKLLDETADVYAV 556

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +    L  ++  +  +L           A+   D      V      ++T+ E  
Sbjct: 557 ASDDVLLAGLAYEKRGQVRLLDSGAGTEEYGVAMRPEDQPLKGKVCTALRQIITSGEWD 615


>gi|229589723|ref|YP_002871842.1| putative ABC transporter exported solute-binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229361589|emb|CAY48466.1| putative ABC transport system, exported solute-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 281

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 90/237 (37%), Gaps = 12/237 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
            +     +  LI+L  ++ +  A   L  I++R  L  G+      F  +       +G 
Sbjct: 9   KRLLPAMLGALILLAASTTAAQADATLDKIEQRHVLVVGVLLSGGPFGGIDPATQKPRGL 68

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+  + L   +  +   +Q +P+    R   LQ  ++D+L  N +WT  R   LG    
Sbjct: 69  NVELAQELGRQLGAE---VQLVPVLPANRVQFLQQGKVDLLIANMEWTPERGEILGFVPT 125

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P     G   ++ K   I+    L G  +C   G++    L +      +      F+  
Sbjct: 126 PFYRVGGTAAVL-KDSKITRWEDLKGQPVCTSQGSSYVKPLTE------LGVELKAFKSS 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            E   A R + C A   D + +  L   +     +  +   ++ +P      +G+++
Sbjct: 179 SESLLALRGNNCVAAVHDATLVNPLIADSAEWQGYRTITPELNPAPSVIWTRRGESD 235


>gi|161506742|ref|YP_001576692.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus DPC 4571]
 gi|160347731|gb|ABX26405.1| Glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus DPC 4571]
          Length = 494

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 86/264 (32%), Gaps = 29/264 (10%)

Query: 1   MYK----DFFVSILCLIILFF-----TSFS----TNASILGDIKKRGFLKCGINTGLVGF 47
           M      + F++ + +I   F      + +     + S++  IK+   L  G +      
Sbjct: 1   MKNAKIVNLFLAFITIISTLFLFNQPVAAADKKVASDSVMKKIKQSKELVVGTSADYPPL 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                V  N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +   +G ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSQIYYKPSGEYFLINKRDQTKYKKIKDFAGQTVGAQTGSIQYQLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K    K       ++  +  A ++ +      +          ND     V      
Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTVKAYAKNDNSLMAVRSDLRE 230

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
            ++  A AI +G       V+ T 
Sbjct: 231 EQAGNAVAIAKGQPGLVKAVNKTI 254


>gi|146320886|ref|YP_001200597.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           98HAH33]
 gi|145691692|gb|ABP92197.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           98HAH33]
          Length = 734

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++ +FF            IK    +    +     F    ++  +KG D
Sbjct: 3   MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++       ++             A+Q+   D L   T  T  R+      F  
Sbjct: 55  VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +         K   ISS   L G ++ V+ GT  +  L +    +    +   F+  +
Sbjct: 110 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D + +         
Sbjct: 168 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 197



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 264 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 316

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 317 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 374

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 375 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 432

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253
             D      L     +                  A+ +G + E   + +    A+V + +
Sbjct: 433 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 489

Query: 254 LG 255
             
Sbjct: 490 YD 491


>gi|126665866|ref|ZP_01736847.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Marinobacter sp. ELB17]
 gi|126629800|gb|EBA00417.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Marinobacter sp. ELB17]
          Length = 252

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 77/247 (31%), Gaps = 21/247 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M K +  ++   ++L   + + +A           LK   +   V F  +    G+  GF
Sbjct: 1   MSKKWLKTLTAGLVLTVAAGTVSAE---------KLKIATDPSFVPFEMLDIETGEMIGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++    ++     +        ++      ALQ+  IDI       T  R     + F 
Sbjct: 52  DMEMIAEVAKRAGFEYD---MNTMDFNGIIPALQTGSIDIAIAGITITEARGKI--VDFS 106

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++      I     L G  I  + G+T+   L    +          +  
Sbjct: 107 DPYYDSGLRLLVRVDNNEILEFKDLEGKKIGSKIGSTSYDYLTGNLE---DSAGVTPYPG 163

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             ++  A  +   DA   D     A         +   +  +        A+ +  +EW 
Sbjct: 164 SADMYLALMSGAVDAVFYDAP-NVAYFARTKGEGKVKTVGALYEGQQYGIAL-KAGSEWV 221

Query: 239 NIVSWTH 245
           + V+   
Sbjct: 222 DEVNTAL 228


>gi|308067589|ref|YP_003869194.1| Glutamine transport system permease protein glnP [Paenibacillus
           polymyxa E681]
 gi|305856868|gb|ADM68656.1| Glutamine transport system permease protein glnP [Paenibacillus
           polymyxa E681]
          Length = 482

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 13/279 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L + + F  + + N  ++   + +     G +T    F     +G + G D
Sbjct: 1   MQKSRKLIVLMICLFFVVALAGNFGVVAHAENKTKYDIGTDTTFAPFEFEDVDGKFVGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++        +    PL       AL++ Q+D +      T  R+      F  
Sbjct: 61  MDLLAAIAKD---QNFEYTIKPLGFNAAVQALETNQVDGVIAGMSITDERKR--KFDFSE 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    +     L G  + V+ GT                +  + F+  
Sbjct: 116 PYFDSGVVMAVRKDNDTVKRYEDLKGQRVAVKTGTEGYTFAESI--KAKYGFTTVPFDDS 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--W 237
            ++    +     A   D   L      N+      ++ D    +    A+ QG  +   
Sbjct: 174 SQMYDEVKTGNSVACFDDYPVLAYGVNQNNG---LKLVTDKEKGASYGFAVNQGKNQELL 230

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
               +       + E   I  K + +  K     +  R+
Sbjct: 231 EKFNAGLVNLRNSGEYDKILAKYLGESGKGVAPVETSRW 269


>gi|148545937|ref|YP_001266039.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148509995|gb|ABQ76855.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
 gi|313497022|gb|ADR58388.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1]
          Length = 273

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 76/250 (30%), Gaps = 23/250 (9%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             + +   + L  ++ R  +   +      F+ +  +    G+DVD  +A++  +     
Sbjct: 16  TATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKLGVK-- 73

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135
            ++    +         S + DI   +   +  R       F    Y      +++    
Sbjct: 74  -LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVEYYASPAVIVVNASDE 130

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------VFERVEEIDAA 185
            I     L G  +   + ++ E  L         +   I           ++        
Sbjct: 131 RIHGAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTENVAFQD 190

Query: 186 YRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  R DA   +   L   +    +     +    + + P A AI +GD EW   V 
Sbjct: 191 LGLGTGVRLDAIITN---LVTAQPRLQQDKRFKLAGAPLYEEPNAVAIEKGDPEWDAKVR 247

Query: 243 WTHYAMVTAE 252
              +A + A+
Sbjct: 248 QV-FAELKAD 256


>gi|310767148|gb|ADP12098.1| Arginine-binding periplasmic protein 2 [Erwinia sp. Ejp617]
          Length = 243

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  +     +                ++   +     F  +       GFD
Sbjct: 1   MKKIVLAALLASVAFATHAAE-------------KIRFASSATYPPFESLNGENQIIGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    ++  +          AL+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLANALCAQM---KAECSFSNNPFDSLVPALKFRRYDAVISGMDITTER--SKQVSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S+++QL G  + V+ GTT +  L +           + ++  +
Sbjct: 103 PYYANSAIVIAQK-NKFSTIAQLKGKRVGVENGTTHQKYLQEKHPE----MITVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R +   GD + + A   TN   +     I       + +  A+ + +    
Sbjct: 158 NAILDLKNGRLEGILGDSAVVGAWLKTNANLATVGEHITDSDFFGTGVGIAVRKDNQALL 217

Query: 239 NIVSWTH 245
           N  +   
Sbjct: 218 NQFNAAI 224


>gi|291451510|ref|ZP_06590900.1| pknB-group protein kinase [Streptomyces albus J1074]
 gi|291354459|gb|EFE81361.1| pknB-group protein kinase [Streptomyces albus J1074]
          Length = 657

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 79/239 (33%), Gaps = 5/239 (2%)

Query: 19  SFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           + +         +     L+ G+       +  + +G+++GFD+    A++ A+  +   
Sbjct: 397 AATAAEKRWEKWRSDNEVLRVGVKKDQPQLS-EEKDGEYQGFDISMALAIAKALGYEKGD 455

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           + ++P+N + R   L +K+  ++  +   T  RE    + F    +  G+ F++ +K   
Sbjct: 456 VLFVPVNTENRSTMLDNKRAHLIVASYSITDEREK--EVDFVGPYFRAGRTFLVREKSTQ 513

Query: 138 SSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             +   +          T    T   + K    K +       E           D Y  
Sbjct: 514 YDLRSAADIKQKDVRVCTAAHSTYERHLKEGGYKAYAPQPASYETCVDKLLDETADVYAV 573

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +    L  ++  +  +L           A+   D      V      ++T+ E  
Sbjct: 574 ASDDVLLAGLAYEKRGQVRLLDSGAGTEEYGVAMRPEDQPLKGKVCTALRQIITSGEWD 632


>gi|160913602|ref|ZP_02076292.1| hypothetical protein EUBDOL_00078 [Eubacterium dolichum DSM 3991]
 gi|158434063|gb|EDP12352.1| hypothetical protein EUBDOL_00078 [Eubacterium dolichum DSM 3991]
          Length = 252

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 20/239 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +  ++L             + K++  L    N+G   +  V   G+  GFD
Sbjct: 1   MKKLLSMCFVAAMLLAGCGG-------EESKEKEKLTVLTNSGYPPYEVVDNKGNLSGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++     +   I+   ++      ++Q+ + D+       T   E    + F  
Sbjct: 54  IDIINAIAEETGYE---IEIKDVDFDTLIPSIQTGKADMAIAG--ITPSAERRKKVDFSE 108

Query: 121 ITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           + +         +  +K GI+S   L G +I  Q GT        + +    K      +
Sbjct: 109 VYFSGETSQNYLLYSEKNGITSQDDLKGKTIGCQMGTVQYEAALHFEETQGAKVDAK--K 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDT 235
               I A  +    DA   + +   A++ + + P  ++V +  +      A    +G  
Sbjct: 167 DYAAIVAELKKGNNDAAIVEKA--VAMEFSEENPDFKYVKINGLADLEGNAICFKKGSP 223


>gi|139438499|ref|ZP_01772015.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC
           25986]
 gi|133776038|gb|EBA39858.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC
           25986]
          Length = 682

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 90/245 (36%), Gaps = 13/245 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              V++   I     S S NAS    + + G      +     F  V  +G+ +GF  + 
Sbjct: 26  TIVVALATTIGASGCSSSQNASSTYTLVENGKFTVASDLATPPFEYVNDSGEDQGFTYEL 85

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPIT 122
              ++  +  + + +     +       ++   + D+ + N   T  R+    + F    
Sbjct: 86  MGMIADELGLELNYLPAQKFDG--IIPMVKQGVKTDVGACNITITDERKK--EVDFTDPY 141

Query: 123 YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               QG  + K  G ++V  L   G  I VQ+GTT+E    ++   +  +   + F+   
Sbjct: 142 IDSNQGVAVAKNTGYNTVDSLNAPGVKIAVQSGTTSE----EWAIENLPQATTVNFDDWT 197

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  + +C A   D+       + ++  +   I+ ++ +      A+ + + E    
Sbjct: 198 AAFTAVMSSQCQAVVCDLP--VEQWMVSNSFTGMEIIKEVPTGEQFGIAVSKDNPELTQA 255

Query: 241 VSWTH 245
           ++   
Sbjct: 256 INDAL 260


>gi|26987393|ref|NP_742818.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Pseudomonas putida KT2440]
 gi|24982049|gb|AAN66282.1|AE016256_9 amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Pseudomonas putida KT2440]
          Length = 275

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 76/250 (30%), Gaps = 23/250 (9%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             + +   + L  ++ R  +   +      F+ +  +    G+DVD  +A++  +     
Sbjct: 18  TATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKLGVK-- 75

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135
            ++    +         S + DI   +   +  R       F    Y      +++    
Sbjct: 76  -LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVEYYASPAVIVVNASDE 132

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------VFERVEEIDAA 185
            I     L G  +   + ++ E  L         +   I           ++        
Sbjct: 133 RIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTENVAFQD 192

Query: 186 YRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  R DA   +   L   +    +     +    + + P A AI +GD EW   V 
Sbjct: 193 LGLGTGVRLDAIITN---LVTAQPRLQQDKRFKLAGAPLYEEPNAVAIEKGDPEWDAKVR 249

Query: 243 WTHYAMVTAE 252
              +A + A+
Sbjct: 250 EV-FAELKAD 258


>gi|317054111|ref|YP_004118136.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316952106|gb|ADU71580.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 256

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 12/220 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + +  L+ G++     F    A+G  +GFD+D   A+ +       K Q++ +       
Sbjct: 21  QAQQTLRLGVDPTFPPFESKAADGSLEGFDIDLGNAICAQA---KVKCQWVEMGFDSSIP 77

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           ALQ+K+ D +      T  R     +AF  + Y      +      +++    L G +I 
Sbjct: 78  ALQAKKFDAILSAMSMTEKR--RQQVAFTDMLYNTPSALLAPAASKLTTDVATLRGKTIG 135

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  GT  E      +       + + +    E+     A R D    +  +     LT  
Sbjct: 136 VAQGTIQETYAKTKWAPEG--VNVVSYPNQMEVYPDLIAGRLDGSLSNAVSAEQGFLTKP 193

Query: 210 RPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTH 245
              ++ I   +  K         A+ +GD     +++   
Sbjct: 194 EGKDYAIKGTLTDKKIFGDGVGIALRKGDEANLKMINAAL 233


>gi|239944223|ref|ZP_04696160.1| putative arginine/ornithine binding protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239990679|ref|ZP_04711343.1| putative arginine/ornithine binding protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291447695|ref|ZP_06587085.1| secreted protein [Streptomyces roseosporus NRRL 15998]
 gi|291350642|gb|EFE77546.1| secreted protein [Streptomyces roseosporus NRRL 15998]
          Length = 320

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 76/238 (31%), Gaps = 20/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              +K G +K G N        V  NG   G D D   AL   +       ++   +   
Sbjct: 61  EKYQKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDLAEALGKQLGVK---FEFTSGSFDG 116

Query: 88  RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHK--KKG 136
              AL S + DI   +      R+            G+ F    +  G      K   + 
Sbjct: 117 LITALNSGRHDIAMSSITDNKQRQEGLDDAGKKLGPGVDFVD-YFLAGTAVYTKKGNPQN 175

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCD 192
           I+S+  L G    VQ GTT E  L    KA             FE   E     ++    
Sbjct: 176 INSIEDLCGKRAAVQRGTTYEEALKKQSKACTDGGEKAITIEPFENDTEAQTRVKSGGAV 235

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A   D      L    D  +   ++ + +   P   A+ +G+T   + +     A++ 
Sbjct: 236 AGVNDYPVAVDLARKADGGNAFEVVGEQVDAGPFGIAVKKGNTGLRDALKEAVDAIIA 293


>gi|227894251|ref|ZP_04012056.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863971|gb|EEJ71392.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 494

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 91/270 (33%), Gaps = 35/270 (12%)

Query: 1   MYK----DFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGF 47
           M K    +  ++ + LI   F    +         + S++  IK+   L  G +      
Sbjct: 1   MKKAKIINLLLAFITLISTLFLFNQSTYAATKKVESGSVMKKIKQSKELVVGTSADYPPL 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                V  N  + G D++  + ++  +    +K+    ++     +AL++ ++D++    
Sbjct: 61  EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117

Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                R+    + F  I Y             +     +S  +G ++  Q G+     + 
Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKISDFAGKTVGAQTGSIQYQLIQ 175

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
              K    K       ++  +  A ++++      +     A +  +      ++     
Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSNKMSGVVVEELIAKAYQSNDSS----LLAVKSD 227

Query: 222 SKSPL---APAIIQGDTEWYNIVSWTHYAM 248
            + P    A AI +G  +    V+ T   +
Sbjct: 228 LREPQAGNAVAIAKGQPDLVKAVNKTINHV 257


>gi|226359768|ref|YP_002777546.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226238253|dbj|BAH48601.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 329

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 80/218 (36%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +I+ RG L   ++     F+      G   GF VD  R ++  +  DP+K+++ PL + +
Sbjct: 89  EIRARGSLVVAVDQNTNLFSFRDPTTGTLTGFGVDLAREVARDLLGDPAKVEFRPLGSGD 148

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               L  +  D++ R     L  E    +AF  +     +  ++    GIS  + L+   
Sbjct: 149 GAEMLAHRDADMIVRPVA--LPCESPQDVAFSTVYLETPRRLVVRVGSGISEPADLARRR 206

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C      +   L+            +     ++   A +  + DA  G  + L  L   
Sbjct: 207 VCTHDDPASVSALSRIAPKA----TIVAVPDWDDCLMAIQQRQVDAVVG-AALLAGLVAQ 261

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +       I+      +  A A+  G  +    V+ T 
Sbjct: 262 DPN---LDIVGPDSDSARYAIALAPGRDDLVRFVNGTL 296


>gi|218438819|ref|YP_002377148.1| polar amino acid ABC transporter inner membrane protein [Cyanothece
           sp. PCC 7424]
 gi|218171547|gb|ACK70280.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7424]
          Length = 513

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 14/211 (6%)

Query: 37  KCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           K         F     N G+  GFD+D  +A+         KI++  L       ALQ+ 
Sbjct: 43  KVATEPAFPPFEMTDQNTGELTGFDIDLMKAIGEEAG---LKIEFESLPFDGIIPALQAG 99

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154
            ++        T  R  +  ++F    +  G    +      I+S   L    I VQ GT
Sbjct: 100 TVEAAISGMTITPER--AQTISFSRPYFKAGLAIAVRDNNNTINSFEDLKNKKIAVQIGT 157

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T                    F+            + DA   D        +        
Sbjct: 158 TGAKQAGQI-----EGVELSTFDSAVLALQELVNGKVDAVVNDAPVTL-YAIKTAGLKGV 211

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            ++ +++++     A+ +    +   ++   
Sbjct: 212 KVVGELVTEEYYGIALPKDSP-YLQKINDAL 241


>gi|171317760|ref|ZP_02906941.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171097044|gb|EDT41899.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 262

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 74/256 (28%), Gaps = 22/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      + L      +                ++  ++           +G   GF 
Sbjct: 3   MKQWMTALAVALAAGSVHAGDWTG---------KEIRLAVDPTYPPLEYKLPDGTLTGFG 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    ++  ++  +       L +++ D ++ +   T  R     +AF  
Sbjct: 54  IDITNALCAEL---KARCVWVESSFDGMIPGLLARKFDAIASSMTITPKR--MQQIAFTN 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K   +   +  L G  + V+ G+         ++        + ++  
Sbjct: 109 RISNAPARLIARKGSPLLPTADSLKGKRVGVEQGSAQADYAVANWQPTG--VQVVSYQNQ 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++ A     R DA      A     L   +  + +     I             + + D
Sbjct: 167 DQVYADLVTGRLDAAFQASIAASDGFLKKPQGKDFMFAGAPIDDVKYFGQGDGLGLRKQD 226

Query: 235 TEWYNIVSWTHYAMVT 250
            +     +    A++ 
Sbjct: 227 NDLREAFNRALAAILA 242


>gi|170702161|ref|ZP_02893069.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria IOP40-10]
 gi|172064317|ref|YP_001811968.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MC40-6]
 gi|170132927|gb|EDT01347.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria IOP40-10]
 gi|171996834|gb|ACB67752.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MC40-6]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    A+G   GFDVD    +   +    +K  ++  +      
Sbjct: 23  KDWTTVRFGVDASYPPFESKDASGKVVGFDVDLGNEICRRM---NAKCVWIENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++++ D +  +   T  R+  +   F    +      +  K  G+  +   L G SI 
Sbjct: 80  ALKARKFDGVLSSMSMTPARQEQIA--FSEKLFNTPTRLVTKKGSGLMPTAESLKGKSIG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y+ A       + ++  +++ A   A R D    D        L   
Sbjct: 138 VEQGTIQETYAKTYWAAKG--VKVVPYQNQDQVYADLIAGRLDGALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           R +        I       +     + + DT+    +      M
Sbjct: 196 RGANFDFAGKDIDDPKTLGNGAGIGLRKEDTDLKAKIDSAITGM 239


>gi|116496268|ref|YP_808002.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|191639796|ref|YP_001988962.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|227532736|ref|ZP_03962785.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239630724|ref|ZP_04673755.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|116106418|gb|ABJ71560.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
 gi|190714098|emb|CAQ68104.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|227189570|gb|EEI69637.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239527007|gb|EEQ66008.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|327383908|gb|AEA55384.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei LC2W]
 gi|327387089|gb|AEA58563.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei BD-II]
          Length = 486

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 25/297 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     ++ L++        +               G +     F     N  + G D+D
Sbjct: 6   KWCVAGVMALMLAVVLGSPVSTQAAEK-----TYVIGTDVTYAPFEFADKNNQYVGIDID 60

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +A++ A   +  K+   PL       AL++ QID +      T  R      A     
Sbjct: 61  LMQAIAKA---EGFKVDIKPLGFNAAVQALEANQIDGVIAGMQITPER--QQKFAMSDPY 115

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y       + +   + S+  L G  + ++ GT                +  + F+    +
Sbjct: 116 YKTAVAMAVGQNSEVKSLKDLRGKRVALKTGTAAADYALSL--KAKYGFTTVTFDDSNNM 173

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE------ 236
                     A   D   L     T     +  +       S    A  +  ++      
Sbjct: 174 YQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKDRSDHLDQRF 230

Query: 237 ---WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                 + +   YA + A+ LG   +   + +   T    + FLG+ +  N G  +G
Sbjct: 231 NAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDSDRSFLGLLRE-NWGTLMG 286


>gi|94992157|ref|YP_600256.1| arginine-binding protein [Streptococcus pyogenes MGAS2096]
 gi|94545665|gb|ABF35712.1| Arginine-binding protein [Streptococcus pyogenes MGAS2096]
          Length = 278

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      L  ++L+  +    +  L     IKK   L   ++     F     V     
Sbjct: 11  FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 70

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +  D   ++  P++      +LQ+ + D+       T  R     
Sbjct: 71  IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGLSHTKERAKV-- 125

Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      +M       +  +S L+G  +  Q G+  E  +       N     
Sbjct: 126 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 181

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    + E     +A +  A T +          +   +              A A+ + 
Sbjct: 182 ISLTAMGEAINELKAGQVYAVTLEAPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 241

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
             +    V+     +   E   
Sbjct: 242 SGDLTKAVNKVIAKLDEQERYK 263


>gi|16802888|ref|NP_464373.1| hypothetical protein lmo0847 [Listeria monocytogenes EGD-e]
 gi|16410235|emb|CAC98925.1| lmo0847 [Listeria monocytogenes EGD-e]
          Length = 480

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 98/297 (32%), Gaps = 22/297 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+    FT    NA    +I    +L  G +T    F   + +G+ 
Sbjct: 1   MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEEI----YL-IGTDTTFAPFEF-EKDGEH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT                +  +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ +    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +            + A  E     KN    +    N   + F+GI KSS      GL
Sbjct: 225 QELLEKFNAGLVNIKASGEYEKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281


>gi|107099296|ref|ZP_01363214.1| hypothetical protein PaerPA_01000308 [Pseudomonas aeruginosa PACS2]
          Length = 248

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 67/237 (28%), Gaps = 19/237 (8%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +++   +   +A +L D+ +RG L+  +      F   +  G   GF+ +    L++ + 
Sbjct: 1   MLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAELA 59

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             P    ++          LQS + DI          R       F           I+ 
Sbjct: 60  VKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLIVR 114

Query: 133 KKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             +     S+  L G  + V  GT                 +   +    E      + R
Sbjct: 115 ADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLASKR 169

Query: 191 CDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA   D         +          + P      P      + + ++   ++   
Sbjct: 170 IDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 222


>gi|328958153|ref|YP_004375539.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
 gi|328674477|gb|AEB30523.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
          Length = 485

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 80/240 (33%), Gaps = 15/240 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF----LKCGINTGLVGFAEVKANGDW 56
           M K     +  + IL    F   A+ L    ++G          +     F    A+GD+
Sbjct: 1   MIKKQKQFLGAVFILMLGLFINLATPLSVSAEKGTESDPYMITTDVTYAPFEFKNADGDY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DV+   A++          +  PL       AL+S Q+D +      T  R+     
Sbjct: 61  VGIDVEILDAIAQD---QGFSYELRPLAFSAGLQALESNQVDGMIATMSITDERKE--SF 115

Query: 117 AFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    + K    I+S   L G ++ V+ GTT    +A+  K  N+  +   
Sbjct: 116 DFSDPYFEAGTVMAVAKDNEDITSYEDLDGKTVAVKVGTTGAAFVAELKKEFNIDVN--Q 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE    +     A   DA   D   +           +     D  +      A+ +G  
Sbjct: 174 FEDSATMYEDVVAGHSDAVFDDYPVMAYAVQQ---GLQLQFPLDPEAGDVYGFAVNKGQN 230


>gi|226944240|ref|YP_002799313.1| ABC transporter substrate binding protein, family 3 [Azotobacter
           vinelandii DJ]
 gi|226719167|gb|ACO78338.1| ABC transporter, substrate binding protein, family 3 [Azotobacter
           vinelandii DJ]
          Length = 292

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 86/247 (34%), Gaps = 11/247 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
               ++    +L     + +A   L  I++R  +  G+      F  +     +  G++V
Sbjct: 16  KALAALFGATLLAVAGSAAHADATLEKIRERNRISVGVILSGPPFGTIDPVTREHLGYNV 75

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + ++  +      +    + A  R   LQ  ++DIL  N   T  R   L     P 
Sbjct: 76  ELAKGIAKTLGVGLETVS---VLAPNRVQFLQQGKVDILIANMQLTEERTQILDYVPTP- 131

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               G G ++ K  GI++   L G  +CV  G+     L + + A         F    E
Sbjct: 132 YEEVGGGALIRKGSGIANWEDLKGKPVCVSQGSNFIKPLVETYGA-----EIKAFRSQSE 186

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              + R + C A       +  L    +     + LP+ +  SP    + +G+ +    +
Sbjct: 187 SLLSLRGNGCVAAVHVGPTMRTLLKEPEWADYELPLPNDLIPSPSVIWVRKGEKDIQARL 246

Query: 242 SWTHYAM 248
                  
Sbjct: 247 DAIVRDW 253


>gi|310778142|ref|YP_003966475.1| extracellular solute-binding protein family 3 [Ilyobacter
           polytropus DSM 2926]
 gi|309747465|gb|ADO82127.1| extracellular solute-binding protein family 3 [Ilyobacter
           polytropus DSM 2926]
          Length = 251

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 22/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L ++++         +     +++  L  G N     F  +  +G   GFD
Sbjct: 1   MRKMMLIVSLLMLVVLGGCGKKETAQ----EEKKVLFVGTNAEFKPFEYL-EDGKIVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    +   +  +   +++  ++      ALQS++ID++      T  R+    + F  
Sbjct: 56  AELMEKILENLGYE---MEWKNMSFDGLIPALQSEKIDLIIAGMTPTEERKK--AVDFSD 110

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 Q F I+ K   + ++  L    +  Q GT  E        A         +  +
Sbjct: 111 SYLTTKQSFVIIEKNNELKTMDDLKNKKLGAQLGTAQETIARGIEGAK-----ITPYTSI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  ++ + DA   +          N+  +  +   LP        A AI +G+ E 
Sbjct: 166 TAAILDLKSEKLDAVVLENLVALPYIKNNEGLKKIDMEELPKADV----AIAINKGNEEL 221

Query: 238 YNIVSWTHY 246
              ++    
Sbjct: 222 LEKINKELQ 230


>gi|227822264|ref|YP_002826235.1| putative solute-binding component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227341264|gb|ACP25482.1| putative solute-binding component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 15/220 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G       F  + A+G   GFDVD  +AL   +  +     ++  + +    AL +
Sbjct: 29  KVVIGTEGAYPPFNNLAADGSLTGFDVDIAKALCEEMKVE---CTFVTQDWEGIIPALIA 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
           K+ D +  +   T  R+    + F    Y      ++ K   I+  + + L G  +  QA
Sbjct: 86  KKFDAIIASMSITEERK--QKVDFTNKYYNTPPAIVVPKDSPITEATEAALQGKILGAQA 143

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT       + K         ++   +E        R DA   D+  L     + D   
Sbjct: 144 STTHSNYAEAHMK----GAEIKLYPTADEYKLDIANGRVDAVIDDVVVLSEWLKSEDGAC 199

Query: 213 EH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 + +  +I+      A+ +GD       +    A+
Sbjct: 200 CKLLGTLPIDPVINGEGAGIAVRKGDDALREKFNKAIEAI 239


>gi|146294115|ref|YP_001184539.1| extracellular solute-binding protein [Shewanella putrefaciens
           CN-32]
 gi|145565805|gb|ABP76740.1| extracellular solute-binding protein, family 3 [Shewanella
           putrefaciens CN-32]
          Length = 244

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 72/224 (32%), Gaps = 18/224 (8%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD+D  + ++         ++   +     
Sbjct: 23  KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
            +AL S +ID ++     T  R+    + F    Y   Q  +++K    I ++  + G  
Sbjct: 80  IVALNSGKIDFIASGMTITAERQA--NVNFSEPYYEATQVILVNKDNDSIHTLEDIKGKY 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             VQ GTT +        +     +   F    E     +  + D    D          
Sbjct: 138 FAVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNAKVDLVLFDSEPAANYLAK 191

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           N    E  ++           A+ +   E    ++ T  A + A
Sbjct: 192 NP---ELKMIKLDFPAEFYGFAVSKKQPELLASINKTL-ANMKA 231


>gi|99078016|ref|YP_611274.1| extracellular solute-binding protein [Ruegeria sp. TM1040]
 gi|99035154|gb|ABF62012.1| extracellular solute-binding protein family 3 [Ruegeria sp. TM1040]
          Length = 250

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 22/228 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L L   F T+ +              +  G++ G   F  VK + + +GF+
Sbjct: 1   MKKQIAITALTLAATFGTAQAE------------TINVGMSGGYFPFTFVKLD-ELQGFE 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+++       ++ ++ ++      AL+S +ID ++     T  RE     +   
Sbjct: 48  VDVINAIAAETG---DEVNFVTMSFSGLIGALESGRIDTIANQITITPEREAKFAFSQPY 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +            +  I+  S LSG S+ V  G+  E  L +    +  +     +E   
Sbjct: 105 VFDGAQVVVKRGNEDSITGPSDLSGKSVAVNLGSNFEELLNEL--PNASEIDIRTYESNI 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPL 226
             D A    R DA+  D  +   L   +  P      P  +I +  P 
Sbjct: 163 AQDTAL--GRVDAFVMDRVSSAQLIAESPLPLALAGAPFSEIRNAMPF 208


>gi|218670321|ref|ZP_03519992.1| ABC transporter, substrate binding protein (amino acid) [Rhizobium
           etli GR56]
          Length = 158

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 10/163 (6%)

Query: 1   MY-----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M      +    +I  +     ++   +A  L DI  RG ++ G+ TG      V   G+
Sbjct: 1   MKFSNSIRTALAAIGIVAAGLASAVEAHAVTLNDIISRGTVRIGVLTGAPPMGMVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD    +          ++ +PL    R  ALQ+ ++D L      T  R  +  
Sbjct: 61  PTGYDVDVANLIG---GYLSLPVELVPLTPPARIPALQTGKVDFLVATLAPTGERAKT-- 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
           + F           I    +  + ++ L G  +    G++ E 
Sbjct: 116 VMFTQPYSAFNMDIISGPDQKFAKLADLEGKRVAANRGSSQET 158


>gi|213622642|ref|ZP_03375425.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 205

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 22/219 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLA 227
           R +   GD   + A+        ++ I+ +         
Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYG 198


>gi|139473633|ref|YP_001128349.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134271880|emb|CAM30117.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 724

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLMLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  ++LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K               + S  A+    IK    +    ++    F      G + G D
Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A++        KI+           A+QS Q D +      T  R+      F  
Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   K I +   L   ++  + GT++   L +    +    +   F+   
Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +  +  +   DA   D      LK    +        + IS   +  A+ +  + E   
Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465

Query: 240 IVSWTHYAMVTAEELG 255
           + +    A+  + +  
Sbjct: 466 MFNNGLAALKKSGQYD 481


>gi|330831728|ref|YP_004394680.1| polar amino acid ABC transporter periplasmic binding protein
           [Aeromonas veronii B565]
 gi|328806864|gb|AEB52063.1| ABC-type polar amino acid transporter, periplasmic binding protein
           [Aeromonas veronii B565]
          Length = 252

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 77/250 (30%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +     I+L   S    A           +K G++     F  VK +   +GF+
Sbjct: 1   MKTSIKLISGAAILLATLSGQAIAQE--------TIKVGMSGKYFPFTFVKQD-KLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +          ++++  +    F  L++ +ID +S     T  R+      F  
Sbjct: 52  VDMWNQIGERTGYK---VEFVTASFSGLFGMLETGRIDTISNQITITDERKA--KYDFSQ 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   ++ K    I  +  L G  + V  G+  E  L       N     I     
Sbjct: 107 PYVYDGAQIVVRKGNSTIHGIKDLEGKKVAVNLGSNFEELLR-----KNDPNKKIDIRTY 161

Query: 180 EEID-AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +          R DA+  D  +   L   +  P +    P    ++ L            
Sbjct: 162 DSAFEQDVALGRIDAFVMDRVSTAQLIKESKLPLQQAGAPFETIENALPFLKTPEKQALL 221

Query: 239 NIVSWTHYAM 248
             V     AM
Sbjct: 222 KKVDEALTAM 231


>gi|293377691|ref|ZP_06623880.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|293571887|ref|ZP_06682903.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E980]
 gi|291608141|gb|EFF37447.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E980]
 gi|292643691|gb|EFF61812.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 500

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%)

Query: 1   MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44
           M +      F   +  L+ L F          T+ S+ +  +  I+ K+       ++  
Sbjct: 1   MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F    ANG+++G DV    +++         I+           AL+S Q D +    
Sbjct: 61  APFEFQNANGEYEGIDVKLMESIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T  R+      F    +  G    + K    I S   L G ++  + GT +   L+D+
Sbjct: 118 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
              +        F+  +++    +    DA   D   +        +  E     +  S 
Sbjct: 176 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 230

Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
              A A+ +  + E  N+ +     +    E  
Sbjct: 231 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 263


>gi|186475921|ref|YP_001857391.1| glutamine ABC transporter periplasmic protein [Burkholderia
           phymatum STM815]
 gi|184192380|gb|ACC70345.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 248

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 77/218 (35%), Gaps = 13/218 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L   ++T  V F   + +  + GFD+D   A++  +  D    +  P++      ALQ+
Sbjct: 26  TLLVAVDTAFVPFEFKQGD-KYVGFDIDLWEAVAKDVKIDY---KLQPMDFSGILPALQT 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +D+          R+    + F    Y  G   ++     I     L G S+ ++ GT
Sbjct: 82  HNVDVALAGITIKDERKKV--IDFSDGYYDSGFMLMVPVTSTIKGPDDLKGKSLAIKTGT 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           +     ADY KAH        F  ++      +  R DA   D   +     T  +    
Sbjct: 140 SA----ADYAKAHFAGTDLRQFPNIDNAYLELQTGRVDAAMHDTPNVLYYIHTAGQGRVK 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            + P  +       A  +G       V+    A + A+
Sbjct: 196 AVGPQ-MMAQQYGIAFPKGSP-LVAKVNAAI-AKIKAD 230


>gi|158424239|ref|YP_001525531.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
 gi|158331128|dbj|BAF88613.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
          Length = 264

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 79/227 (34%), Gaps = 13/227 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +I +RG ++ G+  G      V   G+  G+D D    ++  +        Y+ L    R
Sbjct: 34  EIVQRGTVRIGVLIGGPPMGMVDDKGNPTGYDYDVAVLIAKYLGVKAE---YVALTPPAR 90

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             ALQ+ ++D L    + T  R     + F           +  K   + S+  L G  +
Sbjct: 91  IPALQTGRVDFLIATLNPTPERAR--SVMFTMPYNAFNMVVVT-KGAKVESLDALKGKKV 147

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               GT  E  L    +A  +      FE       A  + + +A     +    L +  
Sbjct: 148 GATRGTPQEAALR---RAGGINVTI--FEDDSITTQALLSGQVEAAALPETL--VLSVAK 200

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             P   + +   I     + A+  GD E    ++ T Y M    EL 
Sbjct: 201 QNPDAKLEIGFSIYAQGNSMAVRPGDFEILQWLNNTIYFMKKNGELD 247


>gi|257865935|ref|ZP_05645588.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872268|ref|ZP_05651921.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257799869|gb|EEV28921.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806432|gb|EEV35254.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 717

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 15/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L  +I+   + S  ++   +       K G +     F     N ++ G D
Sbjct: 1   MKRKHMSFALIALIISIFTLSVKSASAEET----TYKIGTDLTFAPFEFKNENNEYVGID 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++         +   PL        + S Q+D +      T  R+      F  
Sbjct: 57  IDLLNAIAED---QGFAVDLRPLGFDPSIQGVLSNQLDGMIAGMSITEERKE--NFDFSD 111

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    +      I+S   L G ++  + GT +   L +    +            
Sbjct: 112 PYFDSGIQMAVADDNDSITSYEDLEGETVGAKVGTESARFLEENKDQYGYDIKL-----Y 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++    Y A R             L    +      ++ +    +    A+ +G  +   
Sbjct: 167 DDATGLYGAVRNGTVAAAFDDYPVLGYAINNGEPMKLVGEPEKGASYGFAVRKGQNQELL 226

Query: 240 IVSWTHYAMVTA 251
                  A + A
Sbjct: 227 EKFNAGLANMKA 238



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 78/243 (32%), Gaps = 15/243 (6%)

Query: 18  TSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           T+  ++A     +K   K+   +   ++    F     + ++ G DVD     ++ +   
Sbjct: 251 TTSDSDADTSEMVKVEPKKDVYRIASDSAFAPFEFQNEDNEYVGIDVDLMNR-AAELQG- 308

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
              I++  +       AL   Q D +      T  R       F    +  G    + + 
Sbjct: 309 -FNIEFNFIGFSGALQALDGNQADGMIAGMTITDER--RQSYDFSDSYFESGIQIAVKEG 365

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+S   L G ++  + GT +   L    + +        ++  +++ AA    + DA
Sbjct: 366 NDSINSYEDLEGKTVGAKVGTESADFLIANEEKYGYS--IKYYDAADQLYAAVNGGQIDA 423

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D   +        +    V   +  S      A+ +  + E   + +     M    
Sbjct: 424 MMDDYPVIGYAISQGQK---LVTPIEKESGGQYGFAVKKGQNPELIQMFNEALKEMKRTG 480

Query: 253 ELG 255
           E  
Sbjct: 481 EYD 483


>gi|167743916|ref|ZP_02416690.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 14]
          Length = 240

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
           +A  L  I     +        V F  +       GF  D   A+       +     +I
Sbjct: 15  HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y+P+  + R   L +   D+   +T  T  R     ++F    ++ G   ++ K   I 
Sbjct: 75  AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G ++   AG+T E  +  Y   H++    +  +          + R      D 
Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             L+ ++     P    +  D +   P    + +GD   
Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|323342444|ref|ZP_08082676.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463556|gb|EFY08750.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 273

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 89/268 (33%), Gaps = 26/268 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKA----N 53
           M K F V+  C+ +LF +      +    L  IK +G +    +     +  + A     
Sbjct: 1   MKKTFIVA--CVTLLFLSGCGKKDTTVTKLEAIKSKGEIVLVTSPDYAPYEFIDATKTGQ 58

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
             + G D++  + +++ I  D   +    ++  +   A+   + D+      +   R   
Sbjct: 59  DQYVGADIELAKFIANEIGVD---LVIKAMSFGDIASAVSLGKFDMGIAGFTFNEERAE- 114

Query: 114 LGLAFRPITY-----FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
             + F            G      K+  ++++  L  A + VQ G+  +  +        
Sbjct: 115 -QVDFSNTYDTTESTCQGFLVTKEKEATLNTIDDLKTAKVAVQNGSLPQTYVETELPEA- 172

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                 +   +++        + DA     ++     L N       +    I  +    
Sbjct: 173 ---TMQLVNTLDDAVLQLNVGKVDAIAASCASGEGFTLNNKNLVVSKVKFATIDDNGTKV 229

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGI 256
            + +G  +  + V+    A+  A EL +
Sbjct: 230 ILEKGQEDLMDEVNK---AIAKAVELDL 254


>gi|254473430|ref|ZP_05086827.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
 gi|211957546|gb|EEA92749.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
          Length = 258

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 17/220 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            + K+   ++ G       F    A+G   GFD++   AL   +     +  ++  +   
Sbjct: 20  AEAKEWTKVRMGTEGAYPPFNYTTADGTLTGFDIEIGNALCEEL---KLECTWVTQDWDG 76

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSG 145
               L + + D +  +   T  R     ++F    Y    G  + K   ++  +   L G
Sbjct: 77  IIPGLVAGKYDTILASMSITPER--MEKISFSEKYYNTPPGIAVRKDSELTEATPEGLKG 134

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             +  Q  TT      +            ++   EE        R DA   D+ AL    
Sbjct: 135 VRLGAQGSTTHSQFAEEIL----NGSDVALYPTSEEYKLDLENGRVDAVVDDVMALEQWI 190

Query: 206 LTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNI 240
            ++       IL  + S   +        + +GD +   +
Sbjct: 191 SSDKGSCC-KILGTMQSVEEIHGKGAGIGVRKGDEDLAAL 229


>gi|152969095|ref|YP_001334204.1| extracellular solute-binding family protein 3 [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150953944|gb|ABR75974.1| putative bacterial extracellular solute-binding protein, family 3
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 247

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 14/235 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           AS     +    ++ G++     F      G   GFD+D   A+   +    +K  ++  
Sbjct: 2   ASTSALAEGGKEIRFGVDPTFAPFEWKDPQGKLAGFDIDLGNAICQQL---QAKCVWVES 58

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFIMHKKKGISSVSQ 142
           N      AL++++ D +      T  R+  +   F                    ++  Q
Sbjct: 59  NFDGIIPALKARKFDAILSGMYMTEKRKAQIA--FSDKLYNGPVFLVARKNTLQGNTPEQ 116

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G +I V+ G+  E  +  +++   +  + + ++  + +     + R D          
Sbjct: 117 LKGKTIGVEQGSAQETYVNQHWRPQGI--NIVAYQGADSVVRDLESGRIDGAVLSGMMAD 174

Query: 203 ALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252
              L   +  E   +   +    L     A  + + D      ++    A + A+
Sbjct: 175 YSFLQQPQGKEFAFVGGHLQDDTLFGAGAAIGLRKDDEALRQEINGAI-AKILAD 228


>gi|189425081|ref|YP_001952258.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189421340|gb|ACD95738.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 748

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 105/275 (38%), Gaps = 24/275 (8%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           ++   LK G++     F+ V  +G   GFD +  R ++  +      +++  +       
Sbjct: 162 RQGKILKIGVSATREPFSFVDDHGRVSGFDGELARIIAVKL---QRPVEFFNMKFMALIP 218

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-----------KGISS 139
           ALQS ++D++      T  R+ +  + F    + + Q  ++ K              +S+
Sbjct: 219 ALQSGKVDLIISGMTATSERKKT--VNFTQPYFANKQVMLVRKPAVAPLSTVSDRSELST 276

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           ++ L G  ICV  G+  E+     F          VF    +   A   ++ DA+  D S
Sbjct: 277 LNSLKGKRICVLPGSAGEMAARQKF----SGSQFQVFTAAADAALAITTNKADAFVYDKS 332

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQ 258
            L  L L    P E +IL   + K  +A A+ + +T   + ++    ++    EL  +  
Sbjct: 333 VL--LNLAEKNP-ELMILDQAVDKLEVAAALRKDNTALLSEMNKALQSLKQEGELQRLRT 389

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293
           K ++     T      + +       +G    L  
Sbjct: 390 KWVDTKYTATPQLQPAKAVHTSGVLRMGTCANLEP 424



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             +   G L+ G    L  F+   +NG   G D +  + L   +      I+ + +N + 
Sbjct: 406 KAVHTSGVLRMGTCANLEPFSFQ-SNGIITGLDRELSQLLGERLNKK---IEIIDMNFEA 461

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              ALQS +ID    N + T  R+    + F      +    ++ K
Sbjct: 462 LIPALQSGKIDFALSNFNVTEERKKL--INFSVPYITNDISVLVRK 505


>gi|149187233|ref|ZP_01865531.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
 gi|148838769|gb|EDL55708.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
          Length = 274

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 73/252 (28%), Gaps = 17/252 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
                      I +  +     +    L  I +R  L+ G++T  V +A     GD  GF
Sbjct: 6   KNIIRAITTAAIGMAVSLGVAASDTPNLDKINERDTLRVGMST-FVPWAMRDKQGDLIGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  + L+         ++++P        AL +++ D++      T  R  S  + F 
Sbjct: 65  EIDVAKRLAEDSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSITPER--SKSVLFT 119

Query: 120 PITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                 G      KK                 I  + G  T     + F         + 
Sbjct: 120 TPYSHSGVQIAASKKLAEGFSTIEDFDSRRVKIAARRGAYTVQVARETFPKAK----VLQ 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +           A            + +      +   + +SK   A A+  G+ 
Sbjct: 176 FDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKHANAL-FIPFSERLSKGNEAFAVRLGEE 234

Query: 236 EWYNIVSWTHYA 247
           +          A
Sbjct: 235 DKKAFFDQWIQA 246


>gi|134046090|ref|YP_001097576.1| extracellular solute-binding protein [Methanococcus maripaludis C5]
 gi|132663715|gb|ABO35361.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 261

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 20/253 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD------IKKRGFLKCGINTGLVGFAEVKAN- 53
           M     + I+  +++F    S++ + + +      +++ G LK G       F       
Sbjct: 1   MNNKLLILIIGTVLMFSGCVSSSEAQIDEDLSWKNVEENGVLKVGFCATWPPFESRNETT 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ +GFDVD  +AL   +  +   ++ +    +     L     D L             
Sbjct: 61  GEIEGFDVDLAKALGEELGVE---VEIIDAEWQALLGGLSKGDYDTLITCMS--KKEASV 115

Query: 114 LGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
             +    + Y      ++      I+SVS LSG  + VQ G  +E  +     A +    
Sbjct: 116 ENVEMSDVYYELNDVIVVRIDNNEITSVSDLSGKIVGVQLGFGSEQAV----DALSGIQE 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
              +    E     + +R DA     +          +  +  +L   ++ + +A    +
Sbjct: 172 IKRYNYNPEAMIDLQNNRSDAVFVGYT---YALSEISKCPDLKVLDTPVASAEIAMVQKE 228

Query: 233 GDTEWYNIVSWTH 245
           G  E    ++   
Sbjct: 229 GAKELTAKLNEAL 241


>gi|146305347|ref|YP_001185812.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
 gi|145573548|gb|ABP83080.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 261

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 80/218 (36%), Gaps = 10/218 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            DI   G LK  +      F  V  +   +G D+D  + L+  +     K++  P+N+  
Sbjct: 29  EDISAAGVLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADKL---QVKLELTPVNSTN 85

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           R   L + ++D++  +      RE    + F         G    +   I+S+  L+G +
Sbjct: 86  RIPFLTTGKVDLVISSLGKNPEREAV--IDFSAPYAPFYLGVFGPEDAAIASLDDLAGKT 143

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I V  G+  ++ L++             FE      AAY + + +        + A+   
Sbjct: 144 ISVTRGSIEDIELSNVAPK---GATIKRFEDNNSTIAAYLSGQVELIASGNVVMVAIAER 200

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P     +   +  SP+   + +  T   + V+   
Sbjct: 201 --NPKRIPSMKLKLKDSPVYVGVNKSQTALLDKVNAII 236


>gi|307637631|gb|ADN80081.1| putative aminoacid ABC transporter [Helicobacter pylori 908]
          Length = 257

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 76/251 (30%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L+I F   F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKK---ISCLLLVISFLGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 58  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 114 PYSYSGTIMLVRKDENRIKGIEDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +          ++  I +   +   
Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGDVSFVINKHQEKALE 227

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 228 LINQAMQRLIN 238


>gi|296159447|ref|ZP_06842272.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. Ch1-1]
 gi|295890431|gb|EFG70224.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. Ch1-1]
          Length = 264

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G+      F     +G+ +GFD+D   A+ + +    ++  ++  +      ALQ
Sbjct: 30  KEVHFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KARCVWVENSFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ + ++ +   T  R     + F    Y      I  K  G + + + L G  + V  
Sbjct: 87  ARKFNAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLLPTPASLKGKHVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +    +    + ++  ++I A   + R DA   D  A     L   + +
Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDAAFQDAEAASKGFLKKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   ++   L        + +GD    + ++    
Sbjct: 203 GFDFAGPAVTDEKLLGAGVGFGVRKGDKALKDALNQALK 241


>gi|254671931|emb|CBA04283.1| polar amino acid transport system substrate-binding protein
           [Neisseria meningitidis alpha275]
          Length = 262

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 58/193 (30%), Gaps = 10/193 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
              + + S++  I  +G +  G       F     +G   G+DV+  RA++  +      
Sbjct: 20  AQSAVSGSLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVK--- 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++           L++ + D+++     T   E            + G   +      I
Sbjct: 77  VEFKETQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSDPYSWSGAVLVARNDSNI 135

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S+  + G        +          KA       +  + + +        R DA   D
Sbjct: 136 KSIDDIKGVKTAQSLTSNYGE------KAKAAGADLVAVDGLAQSLTLIEQKRADATLND 189

Query: 198 ISALYALKLTNDR 210
             A+      N  
Sbjct: 190 ELAVLDYLKKNPN 202


>gi|257451923|ref|ZP_05617222.1| amino acid-binding protein [Fusobacterium sp. 3_1_5R]
          Length = 238

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L  G N     F  +   G   GFD++   AL+  +  D   ++   +       ALQ
Sbjct: 23  KTLYIGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 78

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
            K++D++      T  R+    ++F    +   Q  I  K K I    +LSG  + V  G
Sbjct: 79  MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKRVGVMLG 136

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            T +  ++D   A         F+       A    + DA   D         +     +
Sbjct: 137 FTGDAVVSDIKGAK-----VQRFDATYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 188

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             I      +   A A+ + D    + ++   
Sbjct: 189 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 220


>gi|170016959|ref|YP_001727878.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803816|gb|ACA82434.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 491

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 117/336 (34%), Gaps = 46/336 (13%)

Query: 13  IILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRA 66
           +++  T  +  A        IKKRG L  G++     F     V+      GF+V   + 
Sbjct: 22  LMMVATPKAQAAETDSAYSAIKKRGVLVVGLSADYAPFEFHATVQGRDQIVGFEVSMAKQ 81

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +      +Q   +       A+Q+ +ID++    + T  RE    + F        
Sbjct: 82  IAKDLGVK---LQIKEMGFDGLIGAVQTGKIDVIVSGINATPDREKV--VDFSKSYLSPK 136

Query: 127 QGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           Q  ++ KK   +  S+V+  +G  +  Q  TT E  + +   +       +  ++V ++ 
Sbjct: 137 QTVLVLKKNAAQFTSNVNSFAGKKVGAQRQTTQETFVQNNMSSA----TLVSLQKVPDLV 192

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVS 242
           +   A +      +     A        +  VI P        ++ A+ +        ++
Sbjct: 193 SQLSAGKLAGVVLNDPISEAYAQQ--NKALKVIYPQPNEAEGAVSVAMPKNSPVLKEKIN 250

Query: 243 WTHYAMVTAEELGI--TQKNINQVSKDTTNPDVQRFL--GIDKSSNI-------GEALG- 290
                +V++ +L     + N    +K +           G   +  +       G  LG 
Sbjct: 251 QAIDDIVSSGKLKAYKKEANTLMFAKQSFWSKYGNLFIKGTLITLALAAVAVVIGSILGT 310

Query: 291 ------LTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
                 L+ ++    ++ +GN   ++   +   + L
Sbjct: 311 VFALFKLSPNFL---LKAVGN---IYVEYV-RGTPL 339


>gi|300214383|gb|ADJ78799.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius CECT 5713]
          Length = 485

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 73/236 (30%), Gaps = 13/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +  +  L F SF     ++             +     F     +  + G D
Sbjct: 1   MKK-FITFLSIISSLIFLSFFVKPQLVHA--DEKTYTIATDVTFPPFEYANDSNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++     +  K+   P+       ++ + Q+D +      T  R+      F  
Sbjct: 58  IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    +     I S+ QL G  + ++ GT+           +  K   + F+  +
Sbjct: 113 PYYSSGIVMAVKPDSNIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +    +     A   D      L+          I+    +      A+ +G  +
Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGBFGFAVKKGTHQ 223


>gi|118444146|ref|YP_877029.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           novyi NT]
 gi|118134602|gb|ABK61646.1| amino acid ABC transporter, substrate-binding protein [Clostridium
           novyi NT]
          Length = 280

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 30/265 (11%)

Query: 1   MYK----DFFV--SILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLV 45
           M K       +   +L +    F                + +  IKK G L  G      
Sbjct: 1   MLKGKKLKLIICGLMLTMGATLFVGCGNKNKDAKEDKNLTKIEKIKKSGKLVLGTCADYP 60

Query: 46  GFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
            +          +  G D++  + ++  +      ++   ++     L+++S +ID++  
Sbjct: 61  PYEAQQVKDGKPEIVGIDIEIAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKIDMVIS 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTL 160
             + T  RE    + F  I Y   Q  I+  +    ++SV  LSG  +  Q  +  E   
Sbjct: 118 GMNPTPDREK--EIDFSKIYYRAKQSVIIRDEDKAKLTSVESLSGKKVGAQLTSLQEKIA 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            +  K            +V E+  A +  + DA   +     A        +    +   
Sbjct: 176 KEEIK----GAKVTSLGKVNELVTALKTKKVDAVIVEEPVAKAYVAKYP-GTTIANINVG 230

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTH 245
                 A  I +G+ E+ + V+ T 
Sbjct: 231 KPNEGSAVGIQKGNKEFVDSVNKTI 255


>gi|328946378|gb|EGG40519.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 729

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGVTAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+QS Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQSGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGY--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +       ++    F     +  + G D++  +A++         ++           ++
Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q+ Q D +      T  R+ +    +    Y       +     I S  +L G ++ V+ 
Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT ++  L +    +        F     +  +       A   D   +        +  
Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               L   I  +P    A          ++   +  +   +E G  Q+ +++        
Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503

Query: 272 D 272
            
Sbjct: 504 S 504


>gi|327183100|gb|AEA31547.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118]
          Length = 219

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 9/194 (4%)

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +   +GF++D   AL+  +    +K  ++   A  +   L++K ID +      T  R+
Sbjct: 4   KDSKIRGFEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVIAAMTITPERK 63

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               + F    +  GQ  ++ K   I +V  L+   + +  GTT    +  +        
Sbjct: 64  K--QVNFSNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTAADAVHKFAPKA---- 117

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F+   +  AA +A + DA   D   L            + +     +  P   A+ 
Sbjct: 118 EILQFDDYGQAFAALKADQGDALVTDNGILAG---ILHDNPGYKLTGGTFTNQPYGIAVN 174

Query: 232 QGDTEWYNIVSWTH 245
           +G T     ++   
Sbjct: 175 KGQTAMMKHINTAL 188


>gi|259503172|ref|ZP_05746074.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259168829|gb|EEW53324.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 502

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 92/281 (32%), Gaps = 38/281 (13%)

Query: 1   MY--KDFFVSILCLIILFFTSFST--------------------NASILGDIKKRGFLKC 38
           M   K   + I+  + L     +                         +  IK++G L  
Sbjct: 1   MKHFKPLLMLIILCVSLVVAPLNAFAAATSSSSSASADSTNSAAADDSVQRIKQKGTLVV 60

Query: 39  GINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           G +     +          ++ GF++D  +  +  +      +    ++     +AL+S 
Sbjct: 61  GTSADYPPYEFTTKKNGKTEYVGFEMDVAKQFAKDLGVK---LVIKNMDFDSLLVALESH 117

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG 153
           ++D +    + T  R+    + F    Y   + F+++K  K   +S    +G  +  Q G
Sbjct: 118 KVDTVIAGMNITPERQK--SVDFSKPYYMGSKFFLINKADKSKFTSTKDFAGKKVGAQNG 175

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 + +               ++  +  A ++H+ D    D +   A    N     
Sbjct: 176 AMEYNLVKENIP----NVQEKGLAKIPSLVLALQSHKVDGVLMDKATAKAYANNNSNLMA 231

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
                 I S   +A A  +GDT      + T  A +  E+L
Sbjct: 232 FDSHIKIQSGG-IAMAFPKGDTSLEAAANQTV-AKINKEDL 270


>gi|222087755|ref|YP_002546292.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725203|gb|ACM28359.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 257

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 72/233 (30%), Gaps = 14/233 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  I+  G LK G       F    A+G   GFDV+   A++S +        +
Sbjct: 21  AHAGDNLKAIQDAGVLKVGTEGTYAPFTFHDASGKLVGFDVEIAEAIASKLGVKAE---F 77

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISS 139
           L          L +K+ D +      T  R+      F           I+      I  
Sbjct: 78  LEGKWDGLIAGLDAKRYDTVINEVGVTDARK--QKYDFSDPYIASKAVLIVKDSNTDIKD 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G     Q+ T+    LA    A       +  +  ++        R DA   D  
Sbjct: 136 FADLKGKKSA-QSLTSNFGKLAQASGA-----ELVGTDGFDQSIQLVLTGRADATINDSL 189

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +    K          I+    +    A  I +G+ E    ++    A + A+
Sbjct: 190 SFLDFKKHKPDAPV-KIVAQQANADFSAAIIRKGEPELQAAINKAL-ADIKAD 240


>gi|156339196|ref|XP_001620108.1| hypothetical protein NEMVEDRAFT_v1g223467 [Nematostella vectensis]
 gi|156204495|gb|EDO28008.1| predicted protein [Nematostella vectensis]
          Length = 250

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 72/220 (32%), Gaps = 14/220 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               LK G       F  + A+G   GFDV+  +AL + +    ++ + +  +      A
Sbjct: 23  AADKLKLGTEGAYPPFNLIDASGQVGGFDVEIGQALCAKM---KAECEVVTSDWDGIIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +K+ D L  +   T  R+    + F    Y +   FI  K     +    L G  I  
Sbjct: 80  LNAKKFDFLIASMSITEERKA--AVDFSEPYYTNKLQFIAPKSGDFKTDKASLKGKVIGA 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q  T     L D     +      +++  E       + R D    D    +    ++  
Sbjct: 138 QRATIAGTWLEDNL---DGVVDIKLYDTQENAYLDLSSGRLDGVLADTFVNWEWLKSDAG 194

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            S       +     +  A+ +GD      +     A + 
Sbjct: 195 KSFEFKGDPVFDNDKIGIAVRKGD-----ALREKLNAALA 229


>gi|300310826|ref|YP_003774918.1| amino-acid ABC transporter periplasmic protein [Herbaspirillum
           seropedicae SmR1]
 gi|300073611|gb|ADJ63010.1| ABC-type amino-acid transport system, periplasmic component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 267

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 83/231 (35%), Gaps = 10/231 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             + D+ K+G +  G+ +G   F  V A G   G+DVD    +   +      ++ +PL 
Sbjct: 31  QSIADLTKKGKITIGVVSGTPPFGSVDAKGTPIGYDVDVANLIGKYLG---LPVEIVPLV 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R  AL+S ++D+L+     T  R     + F           +         +  L 
Sbjct: 88  PPARIPALESGKVDMLAATLAPTPERAK--SVLFTIPYSGFELSIVAPVGSNYKKLDDLV 145

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              + V  G+T +  L             + FE    +  A  +++ DA +   +   A 
Sbjct: 146 KKKVGVSRGSTNDTALTRLAP---PGTVLVRFEDDSTVTQALLSNQVDAISIPNT--MAN 200

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++   R    + +    S  P +  + +G  E    ++   Y +    EL 
Sbjct: 201 EIVKSRGQGKIEVKFPYSVQPNSMTVRKGSYELQQWLNNFIYYVKLNGELD 251


>gi|292487794|ref|YP_003530669.1| arginine ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|292899024|ref|YP_003538393.1| arginine ABC transporter substrate-binding protein [Erwinia
           amylovora ATCC 49946]
 gi|291198872|emb|CBJ45982.1| arginine ABC transporter, substrate-binding protein [Erwinia
           amylovora ATCC 49946]
 gi|291553216|emb|CBA20261.1| Arginine ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
 gi|312171913|emb|CBX80170.1| Arginine ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 243

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 82/247 (33%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    + F   +              ++   +     F  +       GFD
Sbjct: 1   MKKIVLAALLA--SVTFAPQAAE-----------KIRFASSATYPPFESLNGENQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    ++  +          AL+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLANALCAQM---KAECSFSNNPFDSLVPALKFRRYDAVISGMDITAER--SKQVSFTR 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    +++SQL G  + V+ GTT +  L +           + ++  +
Sbjct: 103 PYYANSAIIIAQKG-KFTAISQLKGRRVGVENGTTHQRYLQEKHPE----IVTVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + + A   TN         I       + +  A+ + +    
Sbjct: 158 NAILDLKNSRLDGILGDSAVVGAWLKTNANLASVGEHITDSDFFGTGIGIAVRKDNQALL 217

Query: 239 NIVSWTH 245
           +  +   
Sbjct: 218 DQFNAAI 224


>gi|323524410|ref|YP_004226563.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323381412|gb|ADX53503.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 264

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 82/247 (33%), Gaps = 19/247 (7%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
               L  +S +  A           L+ G+      F     NG+ +G D+D  +A+ +A
Sbjct: 13  AFASLASSSGAIAADTS-------TLRFGLEAQYPPFESKGPNGELQGLDIDVGKAVCAA 65

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                   +++  +      ALQ ++ D ++   + T  R  ++      +     Q   
Sbjct: 66  A---HMTCKWVETSFDGLIPALQGRKFDAINSAMNATEQRRQTIDFT-TVVYRVPTQLIA 121

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                 + +   L G  + V   +  E     +++        + ++   ++     A R
Sbjct: 122 KRDSGLLPTAEALKGKRVGVLQASIQETFAKTHWEPAG--VTVVSYQDQNQVYTDLVAGR 179

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
            DA      A     L+     ++  +   +         +A  I +GDT     ++   
Sbjct: 180 LDATLVLAPAGQTGFLSKPSGRDYAFVGQPVRDDKILGSGIAYGIRKGDTALRERLNAAI 239

Query: 246 YAMVTAE 252
            A V A+
Sbjct: 240 -AKVQAD 245


>gi|323526410|ref|YP_004228563.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323383412|gb|ADX55503.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 248

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 11/201 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L    +T  V F   + +  + GFD+D  + ++  +  D    +  P++      ALQ+
Sbjct: 26  TLLVACDTAFVPFEFKQGD-QYVGFDIDLWKEVAKDLKIDY---KLQPMDFSGILPALQT 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +D+          R+    + F    Y  G   ++     I     L G S+ ++ GT
Sbjct: 82  HNVDVALAGITIKEERKKV--IDFSDGYYDSGFMLMVPTASTIKGPDDLKGKSLAIKTGT 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           +     ADY KA+        F  ++         R DA   D   +     T  +    
Sbjct: 140 SA----ADYAKANFNGTELRAFPNIDNAYLELATGRVDAAMHDTPNVLYYIHTAGKGRVK 195

Query: 215 VILPDIISKSPLAPAIIQGDT 235
            + P  +       A  +G  
Sbjct: 196 AVGPQ-MMAQQYGIAFPKGSP 215


>gi|91782905|ref|YP_558111.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand
           binding protein [Burkholderia xenovorans LB400]
 gi|91686859|gb|ABE30059.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 264

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G+      F     +G+ +GFD+D   A+ + +    ++  ++  +      ALQ
Sbjct: 30  KEVHFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KARCVWVENSFDGLIPALQ 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ + ++ +   T  R     + F    Y      I  K  G + + + L G  + V  
Sbjct: 87  ARKFNAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLLPTPASLKGKHVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +    +    + ++  ++I A   + R DA   D  A     L   + +
Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDAAFQDAEAASKGFLKKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
                   ++   L        + +GD    + ++   
Sbjct: 203 GFDFAGPAVTDEKLLGAGVGFGVRKGDKALKDALNQAL 240


>gi|254255201|ref|ZP_04948517.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124900938|gb|EAY71688.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 260

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 80/221 (36%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G  KGFD+D   AL + +    +K  ++  +      
Sbjct: 23  KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            LQ+++ D++  +   T  R     + F    Y +    I     G +   S+L+G  I 
Sbjct: 80  GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPEASKLAGKRIA 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E    + + A       + +   ++  A     R D    D        L   
Sbjct: 138 VEQGTVQETYAREKWAAAK--VEIVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           R         ++  + +     A  + + DT+  + ++   
Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKTDTDLRDALNRAI 236


>gi|25011729|ref|NP_736124.1| hypothetical protein gbs1689 [Streptococcus agalactiae NEM316]
 gi|77414198|ref|ZP_00790362.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 515]
 gi|24413269|emb|CAD47348.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77159769|gb|EAO70916.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 515]
          Length = 277

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 12/249 (4%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K      I+ + +    + S+ +      KK   +          F+ V  +G   GFD
Sbjct: 4   KKVLSVTGIILVTVASLAACSSKSHTTKTGKK--EVNFATVGTTAPFSYV-KDGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+      D  K+ +        F  + S +  +   N  ++  R  S    F  
Sbjct: 61  IEVAKAVFK--GSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSER--SQKYLFSY 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                     + K   I + + ++G    V  GTTT   L ++ K H      + +    
Sbjct: 117 PIGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTNEN 176

Query: 181 --EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
             +I       + D +           + N   +    +P  +   P       Q   + 
Sbjct: 177 ITQILTNLSDGKAD-FKLFDGLTVNAIIKNQGLTNLKTIPLTMRDQPYIYFIFGQDQKDL 235

Query: 238 YNIVSWTHY 246
              V+    
Sbjct: 236 QKYVNNCLK 244


>gi|325529506|gb|EGD06408.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. TJI49]
          Length = 265

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 22/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++      +   +   +A           L+ G+      F     NGD +GFD+D
Sbjct: 8   KTLKLAFALACAIGSGAAVADAQT---------LRFGLEAQYPPFESKAPNGDLQGFDID 58

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+           +++  +      AL+ ++ D ++   + T  R     + F  I 
Sbjct: 59  VGNAVCR---TAKLSCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDFTTII 113

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y      I     G + +   L G  + V   +  E     +++   +    + ++   +
Sbjct: 114 YRVPTQLIARTDSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVS--VVAYQDQNQ 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTE 236
             A   + R DA      A     L+         +   +         +A  + +GD  
Sbjct: 172 AYADLVSGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRKGDDA 231

Query: 237 WYNIVSWTH 245
             + +    
Sbjct: 232 LKSKLDAAI 240


>gi|317058474|ref|ZP_07922959.1| amino acid-binding protein [Fusobacterium sp. 3_1_5R]
 gi|313684150|gb|EFS20985.1| amino acid-binding protein [Fusobacterium sp. 3_1_5R]
          Length = 241

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L  G N     F  +   G   GFD++   AL+  +  D   ++   +       ALQ
Sbjct: 26  KTLYIGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
            K++D++      T  R+    ++F    +   Q  I  K K I    +LSG  + V  G
Sbjct: 82  MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKRVGVMLG 139

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            T +  ++D   A         F+       A    + DA   D         +     +
Sbjct: 140 FTGDAVVSDIKGAK-----VQRFDATYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 191

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             I      +   A A+ + D    + ++   
Sbjct: 192 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 223


>gi|227529156|ref|ZP_03959205.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227351000|gb|EEJ41291.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 501

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 84/234 (35%), Gaps = 15/234 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA---NGDWKGFDVDFCRALSSAIFDD 74
           TS       L  IK++G L  G +     +           + GF+V   +  +  I   
Sbjct: 39  TSQVAENDSLQKIKQKGTLVVGTSADYPPYEFTTKEHGKTKYVGFEVSLMKQFAKDIGVK 98

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
              +    ++     +AL++ +ID ++   + T  R+    + F  + Y     F+++K 
Sbjct: 99  ---LVIKNMDFDSLLVALETGKIDCIAGAMNITNERKK--SVDFSDVYYTGDSYFLINKS 153

Query: 134 -KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
            K  + +    +G ++  Q GT     ++      N K       ++  +    ++H+ D
Sbjct: 154 DKDKLVNAKSFNGKTVGAQNGTLQSTMISKDMPQANGKG----LAKLSSLVIGLQSHKYD 209

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               D +   A    N            ++   +A A  +GDT   N  + T  
Sbjct: 210 GVLMDAATAKAYASNNSNLYAFNS-KLPVTAGGIALAFPKGDTSLVNAANQTIK 262


>gi|190893858|ref|YP_001980400.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|218514413|ref|ZP_03511253.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
 gi|190699137|gb|ACE93222.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 257

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 69/233 (29%), Gaps = 14/233 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  IK  G  K G       F     +G   GFDV+   A+++ +        +
Sbjct: 21  AHAGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---F 77

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
           +          L +K+ D +      T  R+      F           I+ +    I +
Sbjct: 78  VEGKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVREGDDSIKT 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G     Q+ T+    LA    A       +  +  ++        R DA   D  
Sbjct: 136 FADLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSL 189

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +    K         +      +       I + + E    ++    A + A+
Sbjct: 190 SFLDFKKHKPDAPVKIAAQQ-ENADYSGIIIRKNEPELLAEINKAL-ADIKAD 240


>gi|300728068|ref|ZP_07061441.1| cyclohexadienyl dehydratase [Prevotella bryantii B14]
 gi|299774670|gb|EFI71289.1| cyclohexadienyl dehydratase [Prevotella bryantii B14]
          Length = 289

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 88/274 (32%), Gaps = 31/274 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI------------------LGDIKKRGFLKCGINT 42
           M +     +   ++L   S   + +                   +  I +RG L  G   
Sbjct: 1   MKRYKLWVLTVWLVLGSLSALASCTTSDSGVHDQEGTDVPRTGKIAQIVERGKLLVGTTG 60

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDIL 100
                +  +A G++ GF ++    ++  I  D   I ++P +       + +     D  
Sbjct: 61  DYRPLSYREAEGNYWGFGIEMAEKIAQRIGVD---ITFVPTSWPTLSADVMADPQTFDFA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTEL 158
                 T  R+ ++ +        +G+  +      +   S++ +    +CV        
Sbjct: 118 IGGITITDSRKTAMLM--SDGYLCNGKTILCRAGDAQRFQSLADIDRPEVCVMVNPGGLN 175

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
               + +        +V+ + EEI +       D    +I+      + ND      +L 
Sbjct: 176 --EKFAREQLSHATIVVYPQNEEIPSQVAEGHADVMITEITE-APWYVQNDTRLAAPLLS 232

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              +   +   + +G  +   +V+    A + A+
Sbjct: 233 TPFTHGEIGVLMRKGQDDLLALVNAVI-AQMKAD 265


>gi|255284290|ref|ZP_05348845.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bryantella formatexigens DSM 14469]
 gi|255265184|gb|EET58389.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bryantella formatexigens DSM 14469]
          Length = 260

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 72/240 (30%), Gaps = 15/240 (6%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K+F    VS   +  L   + +   S    +          +T    F    A+G++ 
Sbjct: 1   MKKNFTAKLVSAAAVGALALCTMAGAVSASDKV-----WVIATDTAFRPFEYTNADGEFV 55

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD   A++     +        +       A+Q  Q D L         R    G  
Sbjct: 56  GIDVDILAAIAEDQGFEYD---LQSIGWDAGVAAVQVGQADGLIAGATINDER-KEKGWI 111

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y   Q F +     I+S+  L G ++ V+ GT ++         +         E
Sbjct: 112 FSDGYYDATQSFFVAADSDIASLEDLEGKNVVVKIGTASKTFAESLMDEYGF--TVTTME 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTE 236
              ++          A   D     A    +  +  +          +P   AI+    +
Sbjct: 170 TSTDMYQDVINGNSAACIDDTPITLAYITQDGVQLKKLEAEGAESESAPYGFAIMDEANQ 229


>gi|27382023|ref|NP_773552.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27355193|dbj|BAC52177.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 296

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 81/254 (31%), Gaps = 11/254 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   +    +   F  + +  A    +IK RG +  GI      +  V A G   G+D 
Sbjct: 28  RRLLALGAATIAAPFVLTRAAYAVTPSEIKARGKVLIGIQGDNPPWGFVDATGKQDGYDA 87

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +     +  +       ++  L    R  AL S ++DIL         R     + F   
Sbjct: 88  EISALFARELG---VPAEFTQLAVANRIPALTSGRVDILFATMAMLPERAK--AVQFSKP 142

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              +   FI  K+  I S + +    I V  G+  +    D  KA         F+    
Sbjct: 143 YGANIITFIAPKEFEIKSPADMGKYVIGVARGSVQDS---DVTKAAPSGTTIRRFDGDAP 199

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  + +  A  G+    Y  +L   +P  +    +  +K         G+ E     
Sbjct: 200 TMQALLSGQVQAVGGN--IFYVPRLDESKPGYYENKLE-FTKLYNGACTRLGEKEINAFA 256

Query: 242 SWTHYAMVTAEELG 255
           +     +    EL 
Sbjct: 257 NDFIEKIRANGELA 270


>gi|325685063|gb|EGD27198.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 485

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 91/242 (37%), Gaps = 20/242 (8%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK----GFDVDFCRAL 67
           +  LF T+    A+       +     G +     F     +G +     G D++  R +
Sbjct: 18  IAALFLTAPKAQAAS------KKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIEILREI 71

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +     +  K +   ++      ALQS QID +      T  R+ +  + F    Y DG 
Sbjct: 72  AK---HENFKYELKIMSFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSYYTDGV 126

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              + K   I+S+  L G ++ V+ GTT+ +      K +  K     +       A  +
Sbjct: 127 CLAVAKDSKITSMKDLKGKTVNVKTGTTSAIYAKSIQKKYGFK--LKYYTNSNTSWADVK 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           A   DA   D     +L+      +   I+   +S +PLA A+ +G+ +    +     A
Sbjct: 185 AGNADACFDDGP---SLRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMFNDGLA 241

Query: 248 MV 249
            +
Sbjct: 242 WL 243


>gi|295398457|ref|ZP_06808496.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
 gi|294973321|gb|EFG49109.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
          Length = 506

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 88/275 (32%), Gaps = 41/275 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILG--------------DIKKRGFLK 37
           M +   V +  ++ +   S S         + AS +               DIK RG L+
Sbjct: 4   MKQIILVCMTLVLAMVGLSQSPVLATEEGQSAASTIDASEATAPGEDTLYQDIKDRGVLR 63

Query: 38  CGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            G N+    F             G D+   + ++  +  D   +    +       +L +
Sbjct: 64  VGTNSTYAPFEFSILKDGKNQVVGLDIFLAQKIADDLGVDLEVVD---MEFSNLLTSLDT 120

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYF--DGQGFIMHKKKGISSVSQL-SGASICVQ 151
            QIDI+      T  R     + F  I             K   I+  S   +G  I + 
Sbjct: 121 GQIDIVLAGMTSTEERAK--SVDFSDIYQVSGQSFVIQESKVSEITDDSYFSNGGKISIG 178

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +L + +Y+          V     +  +A  +   D    D     A     + P
Sbjct: 179 EGTTQQLLVGEYYP----NSEVQVMRTTTDSISALDSGLVDGVLLDED--VAGAYAAENP 232

Query: 212 SEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
           S  VI  ++  + P  A A+ +        V+ + 
Sbjct: 233 SLTVIEANLPIQDPGKAAAMPKDQPTLQAAVNKSI 267


>gi|319401122|gb|EFV89341.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Staphylococcus epidermidis FRI909]
          Length = 485

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 77/251 (30%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           M     + +    +    S   N       IK RG L+ G++           +    ++
Sbjct: 7   MLSIIILMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D++  + ++     +  K++ + +       AL++ +IDI+      T  R+    +
Sbjct: 67  AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F           ++ K +     ++    G +I  Q GT  E       +         
Sbjct: 122 DFTKPYMITNNVMMIKKDEAKRYQNIKDFEGKNIAAQKGTDQEKIAQTEIE----DSKIS 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
              R+ E   + ++ +      +     A    N              K     A+ +  
Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKTKFNEEKKQTCIAVPKNS 236

Query: 235 TEWYNIVSWTH 245
               + ++ T 
Sbjct: 237 PVLLDKLNQTI 247


>gi|323351404|ref|ZP_08087060.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322122628|gb|EFX94339.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 729

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 71/258 (27%), Gaps = 20/258 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +     S               ++    F     +  + G D++  +A++       
Sbjct: 266 STPAGQKATSTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++           ++Q+ Q D +      T  R+ +    +    Y       +    
Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S  +L G ++ V+ GT ++  L +    +        F     +  +       A  
Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   +        +      L   I  +P    A          ++   +  +   +E 
Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKES 486

Query: 255 GITQKNINQVSKDTTNPD 272
           G  Q+ +++         
Sbjct: 487 GKYQEILDKYLASEEKES 504


>gi|255264524|ref|ZP_05343866.1| prephrenate dehydratase [Thalassiobium sp. R2A62]
 gi|255106859|gb|EET49533.1| prephrenate dehydratase [Thalassiobium sp. R2A62]
          Length = 259

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 13/244 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
            FF      ++L  ++ + NA S L +I   G LK G             A   ++G+D+
Sbjct: 2   KFFKIAATAVVLATSAVAANAQSSLNEILSSGVLKVGTTGDWNPMTMRDVATNTYEGYDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL++ +  +   ++++P + K     + S Q   ++ +   +  R  + G +    
Sbjct: 62  DVMTALAADLGVE---VEFVPTDWKTLVSGVTSGQYH-ITGSASVSPSRAKAAGYSNSYF 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           +       +        S   L+  G S+    GTT E  +  +F     +         
Sbjct: 118 SLVTVPLMLKSNMDNFDSWESLNMEGVSVAATLGTTQETQVKQFFPNAEHRIVEAPARDF 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E+     + R DA          L    D+    V +    + +P+A  + Q D  W N
Sbjct: 178 QEVL----SGRADASITSNVEANKLVAQYDQ-LMIVPVEAGRAPTPVAMLLPQADQVWIN 232

Query: 240 IVSW 243
            ++ 
Sbjct: 233 YINT 236


>gi|325690565|gb|EGD32568.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 729

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    +                ++    F     +  + G D++  +A++       
Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++           ++Q+ Q D +      T  R+ +    +    Y       +    
Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSEPYYTANSILAVKDSS 374

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S  +L G ++ V+ GT ++  L +    +        F     +  +       A  
Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   +        +      L   I  +P    A          ++   +  +   +E 
Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGKVAFAVKKGSNPELIEMFNNGLANLKES 486

Query: 255 GITQKNINQVSKDTTNPD 272
           G  Q+ +++         
Sbjct: 487 GKYQEILDKYLASEEKES 504


>gi|322516689|ref|ZP_08069599.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
 gi|322124783|gb|EFX96218.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
          Length = 224

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 16/213 (7%)

Query: 3   KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           + F +S L  + +   +  +          N++ +  I K+G L  G+   +  F    A
Sbjct: 8   RIFAISALAFVAVLLWNTKSSQADERSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYYSA 67

Query: 53  N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
               ++G ++D              K+ +  +  + R   + +  ID+L      T  R+
Sbjct: 68  KTNTYQGMEID---LAKKIAKKLKVKVNFTAVTPQTREALMDNGTIDMLIATYTITDERK 124

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            S  +      Y+D  GF++  K G   +S L+G +I V  G++ +  + +Y  A+N+K+
Sbjct: 125 ASYAM--SNPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKTAVEEYASANNLKF 182

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             +      E+  +  A+R DA+ GD S L   
Sbjct: 183 DYVQLGSYPELAVSLYAYRIDAFAGDKSILSGY 215


>gi|227890645|ref|ZP_04008450.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
 gi|227867583|gb|EEJ75004.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
          Length = 485

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 73/236 (30%), Gaps = 13/236 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +  +  L F SF     ++             +     F     +  + G D
Sbjct: 1   MKK-FITFLSIISSLIFLSFFVKPQLVHA--DEKTYTIATDVTFPPFEYANDSNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++     +  K+   P+       ++ + Q+D +      T  R+      F  
Sbjct: 58  IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    +     I S+ QL G  + ++ GT+           +  K   + F+  +
Sbjct: 113 PYYSSGIVMAVKPDSSIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +    +     A   D      L+          I+    +      A+ +G  +
Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGNFGFAVKKGTHQ 223


>gi|323489868|ref|ZP_08095092.1| extracellular solute-binding protein [Planococcus donghaensis
           MPA1U2]
 gi|323396503|gb|EGA89325.1| extracellular solute-binding protein [Planococcus donghaensis
           MPA1U2]
          Length = 261

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 87/242 (35%), Gaps = 16/242 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   +++L  ++L   +  ++ S                K GI+T    F   + +G+
Sbjct: 1   MKKWSLLALLMAMMLVIAACGSDESEDTTEGGESGSDAKTYKVGIDTTYPPFEF-EVDGE 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D+D   A++    +   +I++ P++      ALQ+ Q+D+       T  R+    
Sbjct: 60  YTGIDIDLITAIAE---NQGFEIEFSPMDFGGIIPALQADQLDVAIAGMSITDERKAV-- 114

Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           + F    +  G   ++      I+S+  L G ++ V++GTT      D    +       
Sbjct: 115 VDFSDPYFDAGLSLVVAEDNSEITSLDDLEGKTVAVKSGTTGAQFARDNEAEYGY--TVA 172

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            FE    +              D   +       +       + D ++      A+++G 
Sbjct: 173 QFEDSPSMFQEVSNGNAAVLLEDYPVIA--YAIAESGLSLKTVGDRLTGDQYGIAVLKGQ 230

Query: 235 TE 236
             
Sbjct: 231 NA 232


>gi|325695929|gb|EGD37820.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 729

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    +                ++    F     +  + G D++  +A++       
Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++           ++Q+ Q D +      T  R+ +    +    Y       +    
Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S  +L G ++ V+ GT ++  L +    +        F     +  +       A  
Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   +        +      L   I  +P    A          ++   +  +   +E 
Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGKVAFAVKKGSNPELIEMFNNGLANLKES 486

Query: 255 GITQKNINQVSKDTTNPD 272
           G  Q+ +++         
Sbjct: 487 GKYQEILDKYLASEEKES 504


>gi|317484848|ref|ZP_07943740.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316923894|gb|EFV45088.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 247

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 9/216 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +        +  N +  G+ +D+ +A++         +++        F AL+S+
Sbjct: 26  LIVASDATWPPIEMLDENKNVVGYSIDYLKAVAKEAG---LNVEFRNTAWDGIFAALESR 82

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q DI++ +   T  R+ ++G  F        Q  ++     + ++ +L G  +  Q GTT
Sbjct: 83  QADIIASSVTITDKRKKAMG--FSDPYCEIRQAVVVSTNSDLKNLKELDGKKVGGQIGTT 140

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEH 214
               L +       K     ++ V            DA   D                + 
Sbjct: 141 G---LVETLPKAKSKAIVKTYDEVGLALEDLAKGNIDAVICDDPVAKFYANKKQEYAGKL 197

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +            A+ + DT+    ++    A+  
Sbjct: 198 KVAFITDDVEFYGFAVRKSDTDLVKKLNEGIKAVKE 233


>gi|256830135|ref|YP_003158863.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
 gi|256579311|gb|ACU90447.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
          Length = 246

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 13/226 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
               L    +T    F      +G   GFDV+   A++  I  +       P++      
Sbjct: 20  SAKKLIVATDTNFPPFEFKDPESGKHTGFDVELWDAIAKEIGAEYD---LQPMDFNGIIP 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASIC 149
            LQS QID+          R     + F    Y  G   ++      I+ V  L+G  + 
Sbjct: 77  GLQSGQIDVGIAGITIKPERAEV--VDFSDPYYNAGLLILVKADNAEITDVKSLAGKIVA 134

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + GTT+E        A        +F   + +     A   DA   D   +     T  
Sbjct: 135 TKLGTTSEDFAKKEAGAK----EVKLFPNNDAMFMELMAGGADAVIFDSPVISEFVRTVG 190

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +  +  I+  +           +G ++    V+     +  +    
Sbjct: 191 K-EQTKIVGPLYMGQSYGIGFPKG-SDLVAKVNEALKKLKDSGAYR 234


>gi|254517676|ref|ZP_05129732.1| amino acid ABC transporter ATP-binding protein [Clostridium sp.
           7_2_43FAA]
 gi|226911425|gb|EEH96626.1| amino acid ABC transporter ATP-binding protein [Clostridium sp.
           7_2_43FAA]
          Length = 253

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 83/264 (31%), Gaps = 28/264 (10%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--VKANG--DWKGFDVDFCRALS 68
           + L   S       L  IK  G L  G++     +    +  NG     GFDVD  + ++
Sbjct: 1   MGLGLISCGAKKDKLSAIKDSGKLVVGLSADYAPYEFHILDENGQDQIVGFDVDIAKEIA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +  +   ++   +N +     + S +ID+          R+    + F  I Y    G
Sbjct: 61  KDLGVE---LELQDMNFENLVAGVSSGKIDLAISGMTPDEERKK--AIDFSEIYYVAEHG 115

Query: 129 FIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            ++  +      +   L G  +  Q G        +            +   V ++  A 
Sbjct: 116 MLVRAEDKDKYKTFENLKGQKVGAQMGAIQAKIAEEKVPEA----DLQLLSNVNDLVLAL 171

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTH 245
           +  + +A   ++    A  +  + P   +    +       A  I +        ++ T 
Sbjct: 172 KGGKIEALVVELP--VAEMIVKNNPELIIAEEKVKDTEGGSAVGIQKNQEALVEQINSTI 229

Query: 246 Y----------AMVTAEELGITQK 259
                       ++ A EL   QK
Sbjct: 230 NRIKEEKLLDQFIIEANELAEKQK 253


>gi|170701774|ref|ZP_02892709.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170133322|gb|EDT01715.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 259

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI      F      G   GFDVD   A+ + +     K  ++         ALQ+
Sbjct: 26  TLRFGIEAAYPPFESKSPAGQLHGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R+    + F P  Y      + H+   +    + L G  + V  G
Sbjct: 83  RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAHRGSPLRPDAASLRGKHVGVLQG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           ++ E  L  ++    +    + +   ++I A   A R DA   +        L      +
Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           + I+ + +             + +GD      +     A+
Sbjct: 199 YQIVGEPLKDAATLGEGTGFGMRKGDKALQTKIVGALDAL 238


>gi|323339948|ref|ZP_08080215.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323092590|gb|EFZ35195.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 482

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 75/256 (29%), Gaps = 13/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +   + LF   F+   S      ++       +     F     +  + G D
Sbjct: 1   MKK-FVSMLCAFLGLFMIGFTVQPSSTAQASEK-TYVIDTDVTFPPFVYANEDNKYVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA++     +  KI+  P+       ++ S Q D +      T  R+      F  
Sbjct: 59  MDLIRAIAKE---EGFKIKIRPVGFNAAVQSVSSGQADGVIAGMSITDERKA--KFDFSD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    +     + S+  L G  + V+ GT+           +  K   + F+  +
Sbjct: 114 PYYSSGIVMGVKPNGDVKSLKDLKGKKVAVKTGTSGADYANSIKDKYGFK--VVTFDDSD 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239
            +    +         D      L           I     +      A+ +  + E   
Sbjct: 172 NMYNDVKNGNSAGCFED---SAVLAYGVKTGLGLKIATKSTNIGDYGFAVKKGHNKELMK 228

Query: 240 IVSWTHYAMVTAEELG 255
           + +     +    E  
Sbjct: 229 MFNEGLAKLKKNGEYD 244


>gi|15611942|ref|NP_223593.1| amino acid ABC transporter [Helicobacter pylori J99]
 gi|4155451|gb|AAD06455.1| putative AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSOR
           [Helicobacter pylori J99]
          Length = 257

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L+I  F  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKK---ISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 58  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 114 PYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALE 227

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 228 LINQAMRRLIN 238


>gi|327470838|gb|EGF16294.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 729

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +       ++    F     +  + G D++  +A++         ++           ++
Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q+ Q D +      T  R+ +    +    Y       +     I S  +L G ++ V+ 
Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT ++  L +    +        F     +  +       A   D   +        +  
Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               L   I  +P    A          ++   +  +   +E G  Q+ +++        
Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503

Query: 272 D 272
            
Sbjct: 504 S 504


>gi|194292630|ref|YP_002008537.1| high affinity periplasmic solute-binding protein; high affinity
           transport system [Cupriavidus taiwanensis LMG 19424]
 gi|193226534|emb|CAQ72485.1| high affinity periplasmic solute-binding protein; high affinity
           transport system [Cupriavidus taiwanensis LMG 19424]
          Length = 276

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 16/252 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71
           +     + +   + L  IK+RG +  G+  G   F  +        G++ D  R L+  +
Sbjct: 15  LSCLAVNAAWADATLDRIKQRGKVSIGVLVGGSLFGSIDPVTQQLVGWNPDLARDLAKRL 74

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             +   +    +    R   LQ  ++D+L  + ++   R   LG A  P     G   ++
Sbjct: 75  GVEAELVP---VQPSNRVQFLQQGKVDLLIASMEYNAERGELLGHAPTPFYRVGGTAAVL 131

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K+ GI+    L G ++C   G++    L + + A         F+   E   A R  +C
Sbjct: 132 -KRSGIAKWDDLRGKTVCASQGSSYVKPLQEQYGA-----QVRGFKTSAESLLALRGGQC 185

Query: 192 DAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY---- 246
            A   D + ++ L  +N   +++   +P  I  +P      +G+T+    V         
Sbjct: 186 VAAVHDATLIHPLVRSNADWTDYAAPIPAEILPAPSVVWTRKGETDTIAAVDKIVQEWHR 245

Query: 247 -AMVTAEELGIT 257
              + A E  + 
Sbjct: 246 SGWLIATEKRLG 257


>gi|153011344|ref|YP_001372558.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563232|gb|ABS16729.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 270

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 10/215 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G       F    A+G ++GF++D     +     +P    Y     +  F A  S+
Sbjct: 35  LNIGAYPSNPPFELKNADGTFEGFEIDIATEAAKRAGLEPEIADY---GFQALFAATTSR 91

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID+   +   T  R      +F    Y    G        ++ ++ L G ++   +G+T
Sbjct: 92  RIDVAVSSITITPER--LKSQSFTQPYYDSDIGVATKTDSAVTGLADLKGKTVGALSGST 149

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E  + +  +A         +   +++     A R DA   DI  +  L L         
Sbjct: 150 GEKWVKENKEAKGF-ADIKGYNSQQDLFLDLGAGRIDAVISDIPGMEHLFLKMKG---FA 205

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +   I +       + +        ++    AM  
Sbjct: 206 VKDRIQTGEQYGLMMAKDHP-LLGKLNDAITAMKQ 239


>gi|218509493|ref|ZP_03507371.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli Brasil 5]
          Length = 237

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 13/226 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  IK  G  K G       F     +G   GFDV+   A+++ +        +
Sbjct: 21  AHAGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---F 77

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
           +          L +K+ D +      T  R+      F           I+ +    I +
Sbjct: 78  VEGKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVREGDDSIKT 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G     Q+ T+    LA    A       +  +  ++        R DA   D  
Sbjct: 136 FADLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSL 189

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +    K         +      +       I + + E    ++   
Sbjct: 190 SFLDFKKHKPDAPVKIAAQQ-ENADYSGIIIRKNEPELLAEINKAL 234


>gi|319950979|ref|ZP_08024850.1| extracellular solute-binding protein [Dietzia cinnamea P4]
 gi|319435361|gb|EFV90610.1| extracellular solute-binding protein [Dietzia cinnamea P4]
          Length = 300

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 14/216 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +  +I+ +G +  G N           NG+  GFD+D   A++  +     + ++  
Sbjct: 52  AALVPAEIRDKGVIVIGTNPPYAPNEFKDENGEIVGFDIDVMTAVAQLMG---LRAEFRE 108

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +      A++   +D+ + +      R  +  + F    +  G  +       +     
Sbjct: 109 SDFDRIIPAIEGGTMDMGASSFTVNDERLKT--VDFV-TYFEAGIQWASAAGNDV-DPDD 164

Query: 143 LSGASICVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G S+ VQ  T ++             A       + F+  +E   A    + DA + D
Sbjct: 165 ACGLSVAVQQTTVSDQEDVPARSKACTDAGKPAIEKVQFDSQDEASTAVALGKVDAMSAD 224

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                     ++   +     D+   +P    + +G
Sbjct: 225 SPITAYAVKQSEGKMQL--AGDVFDAAPYGWPVRKG 258


>gi|292558362|gb|ADE31363.1| Amino acid ABC transporter,3-TM region containing permease protein
           [Streptococcus suis GZ1]
          Length = 490

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++ +FF            IK    +    +     F    ++  +KG D
Sbjct: 3   MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++       ++             A+Q+   D L   T  T  R+      F  
Sbjct: 55  VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +         K   ISS   L G ++ V+ GT  +  L +    +    +   F+  +
Sbjct: 110 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D + +         
Sbjct: 168 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 197



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 72/237 (30%), Gaps = 15/237 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 264 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 316

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 317 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 374

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 375 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 432

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVT 250
             D      L     +                  A+ +G + E   + +    A+V 
Sbjct: 433 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVE 486


>gi|217422247|ref|ZP_03453750.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 576]
 gi|217394478|gb|EEC34497.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           pseudomallei 576]
          Length = 240

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
           +A  L  I     +        V F  +       GF  D   A+       +     +I
Sbjct: 15  HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y+P+  + R   L +   D+   +T  T  R     ++F    ++ G   ++ K   I 
Sbjct: 75  AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSISLFYAGTRVLVKKASRIR 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G ++   AG+T E  +  Y   H++    +  +          + R      D 
Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             L+ ++     P    +  D +   P    + +GD   
Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|134298611|ref|YP_001112107.1| extracellular solute-binding protein [Desulfotomaculum reducens
           MI-1]
 gi|134051311|gb|ABO49282.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 260

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 17/251 (6%)

Query: 2   YKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            K   F ++++ +  L      T+ S       +      ++     F      G   GF
Sbjct: 4   KKSIAFLLTLIIISTLVVGCGGTSNSTSAT-PDKKKFHYAMSGLYKPFNYKDG-GKLVGF 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+    ++  I  + + +       +     L++ + D +  +   T  R     + F 
Sbjct: 62  DVEIGEEIARRIGMEAAPVT---NPWETIIQGLKANKYDAIIGSMAITEER--QEQVDFS 116

Query: 120 -PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            P      Q F+      I+S   L G  I V   +T      +Y    N     I ++ 
Sbjct: 117 RPYYRSGAQVFVSSNNDSITSAKDLKGKKIGVVKASTFRNVALEYTDKKN----VIGYDS 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      R DA   D               +   +   +    +A  + +G+TE  
Sbjct: 173 DVIALQDLPTGRVDAVITDQMVGIVAI---KNGLKIKDVDKPLWVDEMAIPVNKGNTELV 229

Query: 239 NIVSWTHYAMV 249
           N ++     M+
Sbjct: 230 NKINNALDEMI 240


>gi|293568103|ref|ZP_06679440.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1071]
 gi|294617429|ref|ZP_06697063.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1679]
 gi|291589185|gb|EFF20996.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1071]
 gi|291596335|gb|EFF27594.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1679]
          Length = 500

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 88/273 (32%), Gaps = 28/273 (10%)

Query: 1   MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44
           M +      F   +  L+ L F          T+ S+ +  +  I+ K+       ++  
Sbjct: 1   MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F    A G+++G DV     ++         I+           AL+S Q D +    
Sbjct: 61  APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T  R+      F    +  G    + K    I S   L G ++  + GT +   L+D+
Sbjct: 118 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
              +        F+  +++    +    DA   D   +        +  E     +  S 
Sbjct: 176 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 230

Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
              A A+ +  + E  N+ +     +    E  
Sbjct: 231 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 263


>gi|256845434|ref|ZP_05550892.1| amino acid-binding protein [Fusobacterium sp. 3_1_36A2]
 gi|256718993|gb|EEU32548.1| amino acid-binding protein [Fusobacterium sp. 3_1_36A2]
          Length = 250

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 28/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L L  L F +                L  G N     +  +  N    GFD
Sbjct: 1   MKKIITMLMLILSTLSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L   +  +   I++  ++      ALQ+K+ID +      T  RE ++  +   
Sbjct: 46  IELMELLGKELGYE---IKWQDMSFDGLLPALQTKKIDAVIAGMSATPEREKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I +  G   I++ K        L G ++ VQ G+  E    D          P ++    
Sbjct: 103 IFFEGGHDVIVNDKSSFKKKEDLKGKTVGVQLGSIQEEFAKD------NGSIPKLYNNFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239
           E     +  + DA      +      T         +  I  K P A  A  + D +   
Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADAKLAK 213

Query: 240 IVSWTHYAMVTAEELG 255
             S T   +  + E  
Sbjct: 214 EFSNTILKIKNSPEYA 229


>gi|304395168|ref|ZP_07377052.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304357421|gb|EFM21784.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 256

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 22/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++L  +  F                   L+ G++     F    A+G  +GFD
Sbjct: 1   MKKSLSLALLFSLTAFTQGAWAQQ----------TLRFGVDPTFPPFESKAADGSLQGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+ +       K Q++ +       ALQ+K+ D +      T  R     +AF  
Sbjct: 51  IDIGNAICAQA---KVKCQWVQMGFDSSIPALQAKKFDAILSAMSMTDKR--RQQVAFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      +      +++    L G +I V  GT  E      +++       + +   
Sbjct: 106 MLYNTPSALLAPADSKLTTDVASLRGKTIGVAQGTIQETYAKTKWESQG--VKIVSYPNQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDT 235
            E+     A R D    +  +     LT+     +     ++  +I    +  A+ +GD 
Sbjct: 164 MEVYPDLVAGRLDGSLANAVSAEQGFLTSPEGKTYAIKGTLVDKVIFGDGVGIALRKGDE 223

Query: 236 EWYNIVSWTHY 246
               +++    
Sbjct: 224 ANLKMINTALT 234


>gi|90407530|ref|ZP_01215712.1| Arginine-binding periplasmic protein 1 precursor [Psychromonas sp.
           CNPT3]
 gi|90311340|gb|EAS39443.1| Arginine-binding periplasmic protein 1 precursor [Psychromonas sp.
           CNPT3]
          Length = 257

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 20/247 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F++    +I  F            ++  +  ++         F  + A G  +GFD++ 
Sbjct: 3   RFYILFFAVIFSFSAFTQA-----EEVTHKQVVRFATEANYYPFEYLDAQGKMQGFDIEI 57

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +A+   +  D     +         L+L+  + D +    D T  R     + F    Y
Sbjct: 58  AKAICEQMDFD---CSFQNQRFDSLLLSLKFGRFDAVIAALDITSER--LQDVDFSNSYY 112

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                F+         +  L+G  I VQA ++ +  L  +          I +  +    
Sbjct: 113 KVDPVFLRLADTE--DIFSLNGKFIAVQAASSNQDYLTKFKP---HDSFVIPYPTLINAF 167

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-----DIISKSPLAPAIIQGDTEWY 238
            A +  + DA  GD + +           ++++            S    AI +G+    
Sbjct: 168 NALKDAQIDAIFGDRAVILTFLNKVKNNQDYILSEMSGPLLASFSSGYGIAIKKGNKTLQ 227

Query: 239 NIVSWTH 245
             ++   
Sbjct: 228 QQLNTGL 234


>gi|13474096|ref|NP_105664.1| amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium loti MAFF303099]
 gi|14024848|dbj|BAB51450.1| amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium loti MAFF303099]
          Length = 269

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 85/259 (32%), Gaps = 13/259 (5%)

Query: 3   KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K    +IL L    L   + + NA  L DI K G +  G+      F+   A+   KG+D
Sbjct: 8   KSSIAAILVLGAAGLGIATQAANADALADITKAGTINVGVFADFPPFSSASADMSLKGYD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +    + +    +  + R   L   ++DIL         +E    + F  
Sbjct: 68  MDVAQYIADTLKVKLNPVA---VTGQNRIPYLNDHRVDIL---MSVGYSKEREQVIDFAA 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      +     L+  SI V  GT  + +L +   A         F+   
Sbjct: 122 AYAPYYIAVIGPAAMSVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRFDNYN 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  A+ + +             +    D          + S S +   + + +      
Sbjct: 179 SVIQAFISGQTQLMVVGNDVGAQVLAKQDVLKPEQKFQLLTSPSHIG--LNKNEDGLKKA 236

Query: 241 VSWTHYAMVTAEELGITQK 259
           V+     M+   +L  + K
Sbjct: 237 VNDAIAKMLADGKLDESSK 255


>gi|145224167|ref|YP_001134845.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK]
 gi|315444502|ref|YP_004077381.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|145216653|gb|ABP46057.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
 gi|315262805|gb|ADT99546.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 306

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 72/245 (29%), Gaps = 16/245 (6%)

Query: 22  TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
             A+ +   IK  G L  G+N            G   GFDVD   A++  +   P    Y
Sbjct: 54  AIANTVPESIKSTGTLVVGVNVPYAPNEFKDPEGKLVGFDVDLMNAIAGTLGLTPE---Y 110

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
              +  +   ++Q    D+   +   +  RE    + F    +  G  +       I + 
Sbjct: 111 KEADFAKIIPSIQGGTFDVGMSSFTDSKEREE--QVDFV-TYFSAGTAWAQPAGGDI-NP 166

Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
               G  + VQA T  E                     I F+  +    A    + DA +
Sbjct: 167 EDACGKKVAVQATTVQETDELPARSKKCVDEGKPAIEIIPFDSQDAATNAVVLGQADAMS 226

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D      L        +     +    +P    + +G     +++      ++   +  
Sbjct: 227 ADSP--VTLYAIKQTNGKLEQAGETFDSAPYGWPVEKGSPLAQSLL-QALQHLIDNGKYQ 283

Query: 256 ITQKN 260
               N
Sbjct: 284 EIAAN 288


>gi|319940653|ref|ZP_08014996.1| hypothetical protein HMPREF9464_00215 [Sutterella wadsworthensis
           3_1_45B]
 gi|319806019|gb|EFW02777.1| hypothetical protein HMPREF9464_00215 [Sutterella wadsworthensis
           3_1_45B]
          Length = 257

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 75/251 (29%), Gaps = 24/251 (9%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
           M K+FFV +    I       S  A            +         F    +  G+ +G
Sbjct: 1   MTKNFFVRTAAAGIAALVLCGSAVADTW---------RVATEGTFPPFEFYNSTTGEIQG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  R ++  +  D   ++   +       A+ S  ID  +     T  R     + F
Sbjct: 52  FEVDLVREMAKVMKKD---LKLETMGFDAIIPAILSGTIDTGAAGFSITPERAK--RVLF 106

Query: 119 RPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               Y  G   ++ K     I S   L G  I VQ GTT+       F           F
Sbjct: 107 TIPFYKSGLTIVVPKGNPKNIQSFDDLKGKKISVQLGTTSMS-----FAKKIQDAQVTTF 161

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDT 235
               +      A   DA   D      +   N +     + L  I +    A    + +T
Sbjct: 162 NGAGDALLNMIAGNADAVINDKPVTDYIMTQNKQIAESCLHLKPIATADLFAMVTSKQNT 221

Query: 236 EWYNIVSWTHY 246
           +    +     
Sbjct: 222 KLKAEMDKALK 232


>gi|323529009|ref|YP_004231161.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323386011|gb|ADX58101.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 255

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 82/250 (32%), Gaps = 19/250 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + +   +I      +              L+ GI+           +G  KGFDVD
Sbjct: 2   KLPLMMLSAALIFSNGVLAAETDT---------LRLGIDPSYPPMDSKAPDGSLKGFDVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   I    ++ Q++ L       ALQ+++ID +  +   T  RE    + F    
Sbjct: 53  LGNEICRRI---HARCQWVELEFSGMIPALQARKIDAILSSMAITQKRE--QQILFTSKL 107

Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +      I  +   ++  +  L+G  I VQ+GT  E      +       H + ++  +E
Sbjct: 108 FQFKSRLIARQGSPLAGGLQALAGKQIGVQSGTQFEGYALKNWAPLG--AHVVAYKSQDE 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           + A  +  R D             L          + + +S       I     E    V
Sbjct: 166 VFADLQNGRLDGALLGSVEADFGFLRTPAGRGFAFVGEPLSMGDRGTGIGLRKDE--TAV 223

Query: 242 SWTHYAMVTA 251
             +  A + A
Sbjct: 224 QASMNAAIAA 233


>gi|55821477|ref|YP_139919.1| glutamine ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823406|ref|YP_141847.1| glutamine ABC transporter permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55737462|gb|AAV61104.1| glutamine ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739391|gb|AAV63032.1| glutamine ABC transporter permease protein [Streptococcus
           thermophilus CNRZ1066]
 gi|312278815|gb|ADQ63472.1| Glutamine ABC transporter permease protein [Streptococcus
           thermophilus ND03]
          Length = 736

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 62/210 (29%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L ++   F   +  ++          +    +T    F    ++  +KG D
Sbjct: 1   MKKKLLTLFLSVMSALFVFGAKASAS--------TISVVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRKNWD---VNQTYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +S   QL G ++ V+ GT  +  L      +        F+  +
Sbjct: 108 TYYDTSIVIYTRSNDKVSDYKQLKGKTVGVKNGTAAQTWLDKNASKYGF--TVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  +    A   D   +         
Sbjct: 166 LMNNSLDSGSVYAAMDDTPVVQYAIGQGKD 195



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 7/174 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +++    F     +G + G DVD   A++    +    ++           A+QS Q
Sbjct: 283 TISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNAVQSSQ 339

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   I     L G ++  + GT++
Sbjct: 340 ADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVKKGSNIKKYEDLKGKTVGAKNGTSS 397

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
              L +    +        ++    +  +  +   D+   D + L         
Sbjct: 398 YSWLEENADKYGF--TLRAYDEASTMYDSLNSGSIDSLMDDEAVLLYAIQQGRN 449


>gi|13473258|ref|NP_104825.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium
           loti MAFF303099]
 gi|14024006|dbj|BAB50611.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium
           loti MAFF303099]
          Length = 276

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 89/257 (34%), Gaps = 10/257 (3%)

Query: 6   FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
              +    +L         + + + S+L  +  RG L  G  +    +      G+  G 
Sbjct: 1   MAGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+   R L+  +FDDP+K++++  +  +R   + + ++DI  +    T  R  S  + F 
Sbjct: 61  DITMGRILAKGLFDDPTKVEFVMQDPAQRIPNVTTNKVDITIQFMTMTAQR--SQLINFS 118

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y +G   +        +  +L       +      +           +   +  +  
Sbjct: 119 RPYYVEGVALLTLPTAENKTFDKLLAGGSATRISILQNVDAESSVHYALPQAQVLQIDTQ 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +  A  + R DA   D+S +  L      P ++              A+ QGD +W  
Sbjct: 179 ANVLQALESKRADAAAVDLSTVRWLASR--NPDKYFDAGKSWYSMLYGAALRQGDLDWLT 236

Query: 240 IVSWTHYAMVTAEELGI 256
            V+ T    +   E  +
Sbjct: 237 FVNQTFTIAMFGHESAL 253


>gi|324990984|gb|EGC22918.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 729

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +       ++    F     +  + G D++  +A++         ++           ++
Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q+ Q D +      T  R+ +    +    Y       +     I S  +L G ++ V+ 
Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT ++  L +    +        F     +  +       A   D   +        +  
Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               L   I  +P    A          ++   +  +   +E G  Q+ +++        
Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503

Query: 272 D 272
            
Sbjct: 504 S 504


>gi|310814818|ref|YP_003962782.1| extracellular solute-binding protein [Ketogulonicigenium vulgare
           Y25]
 gi|308753553|gb|ADO41482.1| extracellular solute-binding protein [Ketogulonicigenium vulgare
           Y25]
          Length = 263

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 86/245 (35%), Gaps = 14/245 (5%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +   +  +   +    +    A  L +I++RG ++  +  G+  ++ + +N    G
Sbjct: 1   MKINRRIALLAMTAGMSLGLAMPAAAD-LAEIRERGVIRIAVAMGIPQYSYIDSNMQPAG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+  R L+  +      ++ + +    R   +Q+ + D++      T  R     + F
Sbjct: 60  SDVETARMLAEDLG---VALELVEITNAARVPTIQTDKADLVVSALGITDER--RQAIDF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                             IS  + L+G  I +   TT +  +     A+      + FE 
Sbjct: 115 SVPYATLALVVAAPADIDISDYADLTGKRIALTRATTNDQDIT----ANTTGAEILRFED 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +  +  + + D  +   + +  +          + +  I  ++ L   + +G+ E  
Sbjct: 171 DATLITSVISGQVDIISSQSAVIGGINERRRGGP--LEIKFIQRETNLGIGLAKGNPELL 228

Query: 239 NIVSW 243
             V  
Sbjct: 229 AWVDE 233


>gi|271968291|ref|YP_003342487.1| serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270511466|gb|ACZ89744.1| Serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 600

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 10/225 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           + +L  IK  G L+ G   G  G +         GF+V+    ++ A+     K++++P+
Sbjct: 354 SPLLDRIKAGGVLRVGYRDGFPGVSLGVP---PTGFEVEVAEYIARALKVPEGKVRFVPV 410

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
              +R  A++  ++D++  N       +    +AF    Y   +  ++     IS V  L
Sbjct: 411 GYADREAAVERGKVDLVIANLSI-DSADR-SRVAFAGPYYVAHRDVLVRAGMKISEVGHL 468

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  +C+ AG +T   ++D      + +  +               R DA  GD   +  
Sbjct: 469 RGKKLCLAAGQSTGSMISDM----GVTFVAVHDNDTSRCANRVADGRADALPGDDVLIAG 524

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                  P    I    ++      A+  GD      ++    AM
Sbjct: 525 FGARLRGPG-LKIAGIRLTTERYGVALRSGDPRACQAINGAIRAM 568


>gi|238751272|ref|ZP_04612766.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia rohdei ATCC 43380]
 gi|238710546|gb|EEQ02770.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia rohdei ATCC 43380]
          Length = 260

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 13/215 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G +     F    A G+  GFD+D  + L + I    +K  ++  +      +L++K
Sbjct: 28  IKIGTDPTYAPFESKNAKGELVGFDIDIAKELCNRI---DTKCTFVESDFDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+  +   F    Y      I  K   I  ++  L G  + V  G+
Sbjct: 85  KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIAPKDSKIEPTLVALKGKRVGVLQGS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E      ++   +    + ++  + I A   + R DA   D  A     L  +   ++
Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAGSEGFLKQEVGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
                 +             + + D E    +   
Sbjct: 201 GFAGPSVKNDQFFGIGTGMGLRKDDAELKAALDKA 235


>gi|78061107|ref|YP_371015.1| extracellular solute-binding protein [Burkholderia sp. 383]
 gi|77968992|gb|ABB10371.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 257

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 18/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F   +   + L FT+ + +A           ++ GI+           +G  KGFD
Sbjct: 1   MKRTFLPFVY--LCLAFTASAAHA------LDARPVRLGIDPTYPPMDSKAPDGSLKGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +         + Q++ L       ALQ+++ID +  +   T  RE    + F  
Sbjct: 53  VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITEKREK--QILFSS 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +     G+ S +  L+G  + VQ+GT  E     ++    +    + ++  
Sbjct: 108 KLFRFKSRLVARPGSGVDSTTASLAGKHVGVQSGTQFESWALAHWAPAGVS--VVPYKSQ 165

Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +++ A     R DA       +    L++   +    V  P  +    +   + Q DT  
Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRMPKGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225

Query: 238 YNIVSWTHYAMV 249
              +     +M+
Sbjct: 226 KASIDGAIASML 237


>gi|17547231|ref|NP_520633.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Ralstonia solanacearum GMI1000]
 gi|17429533|emb|CAD16219.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Ralstonia solanacearum GMI1000]
 gi|299065893|emb|CBJ37072.1| Cyclohexadienyl dehydratase precursor [Includes: Prephenate
           dehydratase ; Arogenate dehydratase] [Ralstonia
           solanacearum CMR15]
          Length = 267

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 75/262 (28%), Gaps = 18/262 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M+  F    ++L    +   + +   + L +I  RG L+ G       F+     +G + 
Sbjct: 1   MFVRFIRSTALLLCACVAAPALAQATNRLDEILARGTLRVGSTGDYKPFSYKTPGDGRFI 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD    L+ A+      +                 + DI       TL R+      
Sbjct: 61  GLDVDMGERLAKALGVKLEVVP---TTWSTLMRDFGEDRFDIAMSGISVTLERQK--KAF 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +      DG+  I   +      +       G    V  G T E    ++ K        
Sbjct: 116 YSIPYQRDGKTPIARCENQDKFQTLEQIDRPGVRAVVNPGGTNEKFAREHLKQA----QI 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            V+     I     A R D    D      L+         V        S  A  + + 
Sbjct: 172 RVYPDNVTIFNEIIAGRADLMMTDAVETR-LQQKLHPELCAVHPDAPFDFSEKAYLLPR- 229

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  + N V       + + E  
Sbjct: 230 DVVFKNFVDQWLRQTMESGEFA 251


>gi|167850938|ref|ZP_02476446.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei B7210]
 gi|167899540|ref|ZP_02486941.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 7894]
 gi|167916216|ref|ZP_02503307.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 112]
 gi|167924052|ref|ZP_02511143.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei BCC215]
          Length = 240

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
           +A  L  I     +        V F  +       GF  D   A+       +     +I
Sbjct: 15  HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y+P+  + R   L +   D+   +T  T  R     ++F    ++ G   ++ K   I 
Sbjct: 75  AYIPVTRQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L+G ++   AG+T E  +  Y   H++    +  +          + R      D 
Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             L+ ++     P    +  D +   P    + +GD   
Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231


>gi|325687630|gb|EGD29651.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 729

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAILLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGY--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    +                ++    F     +  + G D++  +A++       
Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++           ++Q+ Q D +      T  R+ +    +    Y       +    
Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S  +L G ++ V+ GT ++  L +    +        F     +  +       A  
Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   +        +      L   I  +P    A          ++   +  +   +E 
Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKES 486

Query: 255 GITQKNINQVSKDTTNPD 272
           G  Q+ +++         
Sbjct: 487 GKYQEILDKYLASEEKES 504


>gi|218682498|ref|ZP_03530099.1| extracellular solute-binding protein family 3 [Rhizobium etli CIAT
           894]
          Length = 257

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 67/231 (29%), Gaps = 14/231 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK  G  K G       F     +G   GFDV+   A+++ +        ++ 
Sbjct: 23  AGENLAAIKSTGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141
                    L +K+ D +      T  R+      F           I+      I + +
Sbjct: 80  GKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVRDGDDSIKTFA 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G     Q+ T+    LA    A       +  +  ++        R DA   D  + 
Sbjct: 138 DLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              K         +      +       I + + E    ++    A + A+
Sbjct: 192 LDFKKHKPDAPVKIAAQQ-ENADYSGVIIRKNEPELLAEINKAL-ADIKAD 240


>gi|209551406|ref|YP_002283323.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537162|gb|ACI57097.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 257

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 68/231 (29%), Gaps = 14/231 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK  G  K G       F     +G   GFDV+   A+++ +        ++ 
Sbjct: 23  AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141
                    L +K+ D +      T  R+      F           I+      I + +
Sbjct: 80  GKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVRDGDDSIKTFA 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G     Q+ T+    +A    A       +  +  ++        R DA   D  + 
Sbjct: 138 DLKGKKSA-QSLTSNFGKIATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              K          I  +  +       I + + E    ++    A + A+
Sbjct: 192 LDFKKHKPDAPV-KIAAEQENADYSGVIIRKNEPELLAEINKAL-ADIKAD 240


>gi|254302964|ref|ZP_04970322.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148323156|gb|EDK88406.1| amino acid ABC superfamily ATP binding cassette transporter binding
           protein [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 250

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 82/256 (32%), Gaps = 28/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L L  L F                  L  G N     +  +  N    GFD
Sbjct: 1   MKKIITILMLILSTLSFA--------------TKKLYVGTNAEFKPYEYL-ENNKMVGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L   +  +   I++  ++      ALQ K+ID +      T  RE ++  +   
Sbjct: 46  IELMELLGKELGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I +  G   I++ K        L G +I VQ G+  E    D          P ++    
Sbjct: 103 IFFEGGHSVIVNNKSTFKKKEDLKGKTIGVQLGSIQEQFAKD------NGSVPKLYNNFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239
           E     +  + DA      +      T         +  I  K P A  A  + D++   
Sbjct: 157 EALLDLQNQKIDAVIIAEVSANEYLKTMKG---IKKIDTIKDKLPNASIAFRKVDSKLAK 213

Query: 240 IVSWTHYAMVTAEELG 255
             S     +  + E  
Sbjct: 214 EFSDAILKLKNSPEYA 229


>gi|116512613|ref|YP_811520.1| amino acid ABC transporter permease/periplasmic protein
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116108267|gb|ABJ73407.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactococcus lactis subsp. cremoris SK11]
          Length = 714

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 72/236 (30%), Gaps = 15/236 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K FF   L    +     + +      +K    +K   ++    F        W G D
Sbjct: 1   MKKLFFALALMFATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++     +  K++            L++ Q+D +      T  R+      F  
Sbjct: 55  VDIMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGVIAGMTITDERK--DTFDFSN 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   ++  S+L G ++  + GT  +  L +  K +    +   +    
Sbjct: 110 PYYTSALTIATTKDSKLTDYSELKGKAVGAKNGTAAQTWLQENQKKYGY--NIKTYSDGV 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            + A   +        ++  +                P I        A+++G  +
Sbjct: 168 HMFATLSSGNIVGAMDEVPVI--SYAMKQGQDLATNFPSISLSGGYGFAVMKGKNQ 221



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 66/221 (29%), Gaps = 11/221 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+       +     F     N  + G DVD   A++    +   K+++  +  +    +
Sbjct: 258 KKDVYTIASDNSFAPFEFQNDNKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           +QS   D +      T  R+      +    Y              I S   L G ++  
Sbjct: 315 VQSGHADGMMSGMSITDARK--QVFDYGNPYYSSNLTIATSSTDDSIKSWKDLKGKTLGA 372

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + GT +   L D+ K +        F     + ++      +A   D   +   K    +
Sbjct: 373 KNGTASFDYLNDHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQ 427

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             +       I       A+ +G       +     A + A
Sbjct: 428 GQKFTTPIKPIPDGQYGFAVKKGSNPELIEMFNNGLANLRA 468


>gi|329940764|ref|ZP_08290044.1| solute-binding protein [Streptomyces griseoaurantiacus M045]
 gi|329300058|gb|EGG43956.1| solute-binding protein [Streptomyces griseoaurantiacus M045]
          Length = 288

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 14/217 (6%)

Query: 32  KRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G +    +     F +E+   G  +GFDV     ++  +    + +   P    +   
Sbjct: 47  KAGQITTCTHLPYPPFQSEID--GKVQGFDVSLVDLVADDLGVKQAIVD-TPFENFKTGA 103

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASI 148
            L S Q D+ +     T  R+    + F    +   Q  +++KK G++S++ +   G  +
Sbjct: 104 FLNSGQCDLAAAGMTITEERKK--NVDFSDPYFEATQAVLVNKKSGLTSLADVKSKGKKL 161

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             QA TT E        A    + P+ FE  + +    R  +  A   D   +       
Sbjct: 162 GAQAQTTGEDY------ARKQGFDPVSFESSDAVLNGLRTGQVQAVVIDYPVVQGWLKNK 215

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                  +  +I +       + +G+T+    V+   
Sbjct: 216 ANADAFEVADNINTGEQYGFTVKKGNTKLLAAVNKAL 252


>gi|301067875|ref|YP_003789898.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|300440283|gb|ADK20049.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 474

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 90/292 (30%), Gaps = 27/292 (9%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             L L ++  +  ST A              G +     F     N  + G D+D  +A+
Sbjct: 1   MALMLAVVLGSPVSTQA-------AEKTYVIGTDVTYAPFEFADKNNQYVGIDIDLMQAI 53

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           + A   +  K+   PL       AL++ QID +      T  R      A     Y    
Sbjct: 54  AKA---EGFKVDIKPLGFNAAVQALEANQIDGVIAGMQITPER--QQKFAMSDPYYKTAV 108

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              + +   + S+  L G  + ++ GT                +  + F+    +     
Sbjct: 109 AMAVGQNSEVKSLKDLRGKRVALKTGTAAADYALSL--KAKYGFTTVTFDDSNNMYQDVI 166

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---------WY 238
                A   D   L     T     +  +       S    A  +  ++           
Sbjct: 167 TGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKDRSDHLDQRFNAGLK 223

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
            + +   YA + A+ LG   +   + +   T    + FLG+ +  N G  +G
Sbjct: 224 KVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDSDRSFLGLLRE-NWGTLMG 274


>gi|157691134|ref|YP_001485596.1| L-cystine ABC transporter substrate-binding protein [Bacillus
           pumilus SAFR-032]
 gi|194015794|ref|ZP_03054409.1| L-cystine-binding protein TcyA [Bacillus pumilus ATCC 7061]
 gi|157679892|gb|ABV61036.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Bacillus pumilus SAFR-032]
 gi|194012149|gb|EDW21716.1| L-cystine-binding protein TcyA [Bacillus pumilus ATCC 7061]
          Length = 271

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 76/264 (28%), Gaps = 29/264 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVG 46
           M K FF  +L   +   T+  + AS              +   I+ +G L  G       
Sbjct: 1   MKKMFFAIMLGACVALITACGSGASDNANKQSGSKESGDLWKSIQDKGVLTIGTEGTYAP 60

Query: 47  FAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           F           G+DV+    ++  +   P    +        F  L SK+ D+++    
Sbjct: 61  FTFHDKKTDKLTGYDVEVITEVAKRLDLKPE---FKETQWDSMFAGLNSKRFDVVANQVG 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYF 164
            T          F           +       I  +S + G     Q+ T+    LA   
Sbjct: 118 KTG---RENQYEFSDKYTTSQAIVVTKSDNNDIKKLSDVKGKK-AAQSLTSNYNKLATDA 173

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            A          E + +     +  R D    D  A+     T+   +  V       + 
Sbjct: 174 GAK-----IEGVEGLAQSIQLIQQGRADLTFNDKLAVLNYLKTSGNKNLKVAFETGDPQE 228

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAM 248
               A  +G  E  + V+     M
Sbjct: 229 TY-FAFRKGSGEVVDKVNGALKEM 251


>gi|111223729|ref|YP_714523.1| putative transporter substrate-binding protein [Frankia alni
           ACN14a]
 gi|111151261|emb|CAJ62973.1| Putative transporter substrate-binding protein (partial) [Frankia
           alni ACN14a]
          Length = 272

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 87/239 (36%), Gaps = 22/239 (9%)

Query: 24  ASILGDIKK-RGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS---KI 78
            S +  I + RG+L+ GI T       +       +GFDV   RA+++AIF        I
Sbjct: 4   GSRMRAIAQVRGYLRVGIVTDAPPAGLMNWRTLRLEGFDVGIARAVAAAIFGPDDVDDHI 63

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           Q+  +   ER   L+S  +D+L      T  R+  +   F  + Y      ++ ++ G +
Sbjct: 64  QFRAVTTSEREDLLRSNMVDMLVATMTITCERKRQVR--FSSVYYESTLRLLVRQEAGFT 121

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            ++ L+G  +C  AG+T    LA            +   R+ +   A +    DA  GD 
Sbjct: 122 GIADLAGRPVCTSAGSTASEKLARLPTPA---PRVVTRSRIADCLVALQHGDVDAIVGDD 178

Query: 199 SALYALKLTN-------DRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245
             L  L   +        +              P   A+       GD  +   V+   
Sbjct: 179 VLLAGLAAQDPYTTVLGPQAFGAAFAAGGRLDEPYGIAMPITGDTAGDDGFVAFVNGVL 237


>gi|69248956|ref|ZP_00604829.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|258615978|ref|ZP_05713748.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium DO]
 gi|293557298|ref|ZP_06675844.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1039]
 gi|293560170|ref|ZP_06676672.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1162]
 gi|294616498|ref|ZP_06696279.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1636]
 gi|294621567|ref|ZP_06700733.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium U0317]
 gi|68194329|gb|EAN08842.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|291590646|gb|EFF22374.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1636]
 gi|291598872|gb|EFF29923.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium U0317]
 gi|291600550|gb|EFF30856.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1039]
 gi|291605842|gb|EFF35274.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1162]
          Length = 500

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%)

Query: 1   MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44
           M +      F   +  L+ L F          T+ S+ +  +  I+ K+       ++  
Sbjct: 1   MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F    A G+++G DV     ++         I+           AL+S Q D +    
Sbjct: 61  APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163
             T  R+      F    +  G    + K    I S   L G ++  + GT +   L+D+
Sbjct: 118 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
              +        F+  +++    +    DA   D   +    +   +  E  I  +   K
Sbjct: 176 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVI-GYAIKQGQELETPIKKESGGK 232

Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
              A A+ +  + E  N+ +     +    E  
Sbjct: 233 --YAFAVKKGQNPELLNMFNEGLKELKRTGEYD 263


>gi|307129534|ref|YP_003881550.1| histidine-binding periplasmic protein [Dickeya dadantii 3937]
 gi|306527063|gb|ADM96993.1| Histidine-binding periplasmic protein precursor [Dickeya dadantii
           3937]
          Length = 279

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 25/261 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M++    + I+ +  +    F+          K+  ++ G++     F E    G+  GF
Sbjct: 20  MFRKLSLLKIIVIFTISPIVFA----------KQDVIRIGVDLTFPPFQERDKYGNPSGF 69

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+  ++    +K  Y+      +  AL +K+ID++      T  R+    + F 
Sbjct: 70  DIDITDAICKSV---NAKCDYIVNTFDAQIPALLAKKIDVI-SPLGVTKKRKE--SIDFS 123

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +     F+  K+  +      L G +I VQ GT  E     ++       + I +  
Sbjct: 124 DYLFHIPTRFVARKETNLLPQVDILRGKNIAVQQGTIQEAYANKHWLPEG--VNVISYPD 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            E I     A R D       A+    L      +  +    I+ + L     A  I +G
Sbjct: 182 QEAIYEDLYAGRVDGALSPSVAMTFGFLQTPEGKDFELKGPEITDADLFSIGSAYGIRKG 241

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           DTE   +++     ++ + E 
Sbjct: 242 DTETKQMLNQGLKNIMNSGEF 262


>gi|308184723|ref|YP_003928856.1| amino acid ABC transporter [Helicobacter pylori SJM180]
 gi|308060643|gb|ADO02539.1| amino acid ABC transporter [Helicobacter pylori SJM180]
          Length = 258

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 74/251 (29%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   + +   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIG--FFWGFLNASGLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 AQALLLVVQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 229 LINQAMQRLIN 239


>gi|227542733|ref|ZP_03972782.1| glutamate-binding protein GluB [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227181499|gb|EEI62471.1| glutamate-binding protein GluB [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 288

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 82/289 (28%), Gaps = 19/289 (6%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +  F  I  L +        ST    L      G +  G      G      +    G
Sbjct: 1   MMRRIFAIISALAVAVTATACGSTEPRSLVRSVDSGHVILGTKYDQPGLGMRNPDKTMTG 60

Query: 59  FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            DV+        ++        +I +    +  R   +++ ++D+++        R    
Sbjct: 61  LDVEVATYVVNHIADQRGVAHPEITWRETPSATRETVIKNGEVDMIAGTYSINASRAK-- 118

Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172
            + F        Q  ++      + S+  L  G  +C   G+T    +            
Sbjct: 119 SVNFGGPYLLTHQALLVRSDDHTLQSLQDLDKGRKLCSVTGSTPAQKVKKSLP----GVQ 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAP 228
              ++       A    + DA T D + LY   L      E + +        +      
Sbjct: 175 LQEYDSYSSCVEALHQKKVDAMTTDATILYGFALQYPGEFEVIEMTKEDGKPFTNEHYGL 234

Query: 229 AIIQGDTEWYNIVSWTHYAMV-TAEELGITQKNINQVSKDTTNPDVQRF 276
            + + D E    ++    AM        +  KN+ + +      +    
Sbjct: 235 GLAKDDAESTEAINDAVRAMQDDGSFQAMVDKNLGENASVVEADEAGNL 283


>gi|325694667|gb|EGD36574.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 729

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQSYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGY--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    +                ++    F     +  + G D++  +A++       
Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++           ++Q+ Q D +      T  R+ +    +    Y       +    
Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S  +L G ++ V+ GT ++  L +    +        F     +  +       A  
Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   +        +      L   I  +P    A          ++   +  +   +E 
Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKES 486

Query: 255 GITQKNINQVSKDTTNPD 272
           G  Q+ +++         
Sbjct: 487 GKYQEILDKYLASEEKES 504


>gi|46578524|ref|YP_009332.1| glutamine ABC transporter periplasmic glutamine-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603893|ref|YP_968293.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|46447935|gb|AAS94591.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120564122|gb|ABM29866.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232451|gb|ADP85305.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 249

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 75/216 (34%), Gaps = 12/216 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T    F     +G + GFD++  +A++     D    +  P++       
Sbjct: 22  SAKQLVVAHDTNFKPFEFKGEDGKYTGFDIELWQAIAKIAGVDY---KLQPMDFNGIIPG 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150
           LQ+  +D+          R     + F    Y  G   ++   + GI +V  L+G  + V
Sbjct: 79  LQTGNVDVGIAGITIKPERAAV--VDFSDPYYDSGLMILVRENETGIKAVEDLAGKIVAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +  T++     D+ K+        +F   + +     A   DA   D+  +    +T  +
Sbjct: 137 KTATSSV----DFMKSFGKAKELKLFPNNDSMFFELMAGGADAVIFDMPVVKEFAMTAGK 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               V+ P +           +G +E    V+    
Sbjct: 193 GKVKVVGP-LYQGQSYGIGFPKG-SELVGKVNDALK 226


>gi|302536846|ref|ZP_07289188.1| glutamine-binding periplasmic protein [Streptomyces sp. C]
 gi|302445741|gb|EFL17557.1| glutamine-binding periplasmic protein [Streptomyces sp. C]
          Length = 353

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 76/234 (32%), Gaps = 17/234 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+  G +K G +T       V   G   G D D   AL   +       Q+       
Sbjct: 97  KKIQDAGVIKVGSDTAYAPMEFVDG-GKIVGVDPDIAEALGKQLGVK---FQFTSGTFDG 152

Query: 88  RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHK--KKG 136
              +L++ + DI   +      R+            G+ F    +  G   ++ K   + 
Sbjct: 153 LITSLETGRQDIAMSSITDNKKRQEGLDDKGQKIGKGVDFVD-YFSSGVSLLVKKGNPQN 211

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYT 195
           I S+  L G ++ VQ GTT E T     +    K      F+   E     +A    A  
Sbjct: 212 IKSLDDLCGKTVAVQRGTTYEDTFKAQAEKCGDKKLTIEAFDTDAEAQTRVKAGGAVADL 271

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            D         T+   ++  +            A+ + +T+  + +     A++
Sbjct: 272 NDFPVTAYTAKTSGGGNDFEVGGAQADVGLFGIAVSKENTQLRDALKEALDAII 325


>gi|295704149|ref|YP_003597224.1| sulfur-containing amino acid ABC transporter sulfur-containing
           amino acid-binding protein TcyK [Bacillus megaterium DSM
           319]
 gi|294801808|gb|ADF38874.1| sulfur-containing amino acid ABC transporter, sulfur-containing
           amino acid-binding protein TcyK [Bacillus megaterium DSM
           319]
          Length = 273

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 14/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K    +I   ++L   +           +    ++K   +  G  T       +   G
Sbjct: 1   MKKLQLTAIFLSLLLLLAACGTPNKETAANASKDKVQK---IIVGTGTQFPNICFLDDKG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DV+  + +   +     K ++  ++     L+L+S +ID+++   +    R+   
Sbjct: 58  NLTGYDVELVKEIDKRL--PNYKFEFKTMDFSNLLLSLESNKIDLVAHQMEVNEERKQKF 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                P   F     +  K   I S+  LSG  + V A + +   +  Y K H  + + +
Sbjct: 116 LFNKEPYNIFPLHVVVNEKNTSIKSIKDLSGKKVIVGATSNSANLIDKYNKEHGNRINIV 175

Query: 175 VFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +  ++     +  R DA T                 + V+ P I +       + + 
Sbjct: 176 YSGQGSDDTKTQLKTGRADA-TISTPFAVDFVNKQADAEQKVVGPAISNSKVY-FMLRKN 233

Query: 234 DTEWYNIVSWTHYAMVT 250
           +T     V      +  
Sbjct: 234 ETGLQKDVDKALKEIKE 250


>gi|310767116|gb|ADP12066.1| glutamine ABC transporter periplasmic protein [Erwinia sp. Ejp617]
          Length = 248

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 12/216 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   +  G++ GFD+D   A++  +  +       P++      A
Sbjct: 23  AEKKLVVATDTAFVPFEFKQG-GNYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150
           LQ++ ID+       T  R+    +AF    Y  G   ++      +  +  L+G  + V
Sbjct: 79  LQTRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVKANNDSVKGIDDLNGKVVAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +      + K          F  ++        +R DA   D   +     T  +
Sbjct: 137 KSGTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGK 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   + D I       A  +G  +    V+    
Sbjct: 193 G-QFKAVGDSIEAQQYGIAFPKGSDDLREKVNGALK 227


>gi|297380138|gb|ADI35025.1| amino acid ABC transporter, periplasmic binding protein
           [Helicobacter pylori v225d]
          Length = 258

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 74/250 (29%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   + +   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLAIS--FFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKRQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAMQRLI 238


>gi|120603330|ref|YP_967730.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|120563559|gb|ABM29303.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 261

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 77/224 (34%), Gaps = 11/224 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S++    KRG L+ G +T  V +A    +G + GF+VD    L+  +      ++ +
Sbjct: 18  AEDSVIEQALKRGTLRVGFST-FVPWAMQDKSGAFVGFEVDVATRLAQDLG---LNLELV 73

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
           P        AL + + D++        +R  SL + F     +     +  K     + S
Sbjct: 74  PTKWSGIIPALLTGKFDVIIGGMSVKPVR--SLKVNFTIPYDYASISVMASKSAAAGLKS 131

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +       + V A T +   LA   K    K     F+          + R  A      
Sbjct: 132 LDDFDNPEVVVVARTGSTAALA--AKKRFPKARLRYFDDEGPAIQEVLSGRAHALVSSDP 189

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 L N            ++  P+A A+ + D +  N++  
Sbjct: 190 LPRFEVLANPD-RLFTPEGKPLALEPVAFAVRKSDPDTLNVLDN 232


>gi|257878298|ref|ZP_05657951.1| extracellular solute-binding protein [Enterococcus faecium
           1,230,933]
 gi|257880920|ref|ZP_05660573.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,502]
 gi|257892558|ref|ZP_05672211.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,408]
 gi|260559849|ref|ZP_05832028.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           C68]
 gi|314938647|ref|ZP_07845927.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a04]
 gi|314944091|ref|ZP_07850754.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133C]
 gi|314950329|ref|ZP_07853610.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0082]
 gi|314951101|ref|ZP_07854163.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133A]
 gi|314992313|ref|ZP_07857747.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133B]
 gi|314996122|ref|ZP_07861193.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a01]
 gi|257812526|gb|EEV41284.1| extracellular solute-binding protein [Enterococcus faecium
           1,230,933]
 gi|257816578|gb|EEV43906.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,502]
 gi|257828937|gb|EEV55544.1| extracellular solute-binding protein [Enterococcus faecium
           1,231,408]
 gi|260074073|gb|EEW62396.1| extracellular solute-binding protein family 3 [Enterococcus faecium
           C68]
 gi|313589679|gb|EFR68524.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a01]
 gi|313593129|gb|EFR71974.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133B]
 gi|313596735|gb|EFR75580.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133A]
 gi|313597318|gb|EFR76163.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133C]
 gi|313642035|gb|EFS06615.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0133a04]
 gi|313643346|gb|EFS07926.1| bacterial extracellular solute-binding protein, family 3
           [Enterococcus faecium TX0082]
          Length = 288

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 73/250 (29%), Gaps = 11/250 (4%)

Query: 5   FFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            F  I     +     +  A+       +++K+  L    +  L   +      +  G+D
Sbjct: 16  LFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNELVGYD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +     KI +   N   +  ++  ++ D  + +   T  RE    L+   
Sbjct: 76  VDLAKEVAKRL---NVKISFKEYNVDGQITSVSKRESDFAANDFGITKEREKKFSLSETF 132

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              FD          GI S+  L G     +  T+         + H  K         +
Sbjct: 133 KYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYDNATND 188

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  +     R D    D                 ++     +++     + +G+      
Sbjct: 189 QYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGNDALKKK 248

Query: 241 VSWTHYAMVT 250
           +      M  
Sbjct: 249 IDGVLKEMKE 258


>gi|89098933|ref|ZP_01171813.1| amino acid ABC transporter substrate-binding protein [Bacillus sp.
           NRRL B-14911]
 gi|89086337|gb|EAR65458.1| amino acid ABC transporter substrate-binding protein [Bacillus sp.
           NRRL B-14911]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 79/248 (31%), Gaps = 19/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K     ++        +      ++  +  +   G      +     F+  +A+G   
Sbjct: 1   MKKWIIAVVILCCAAVLGACGKKEASSGGME-LADEGKFTYAASGEFKPFSVTEADGTMT 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD++   A++  +  +P + ++           ++S + D    +       +    + 
Sbjct: 60  GFDIEVGEAVAKELGLEPVQKKFK---FGGIVEGVKSGRFDAAVASHTINE--DRLKAVN 114

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y+ G    +       S+  L    I V  G+T   +  +      +  + I ++
Sbjct: 115 FSIPYYYSGPQIFVRPDSSAKSLDDLKDLEIAVSKGSTYADSAEE------VTDNIIFYD 168

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  A    + DA   D                 +   +++ +S  A A+ + + E 
Sbjct: 169 SDVTALEALSRGKHDAVITDFITGKEAI----GSGMEIEGKELLGRSEQAIAVAKDNEEL 224

Query: 238 YNIVSWTH 245
            + ++   
Sbjct: 225 LDQINEAL 232


>gi|326334175|ref|ZP_08200398.1| bacterial extracellular solute-binding protein, family 3
           [Nocardioidaceae bacterium Broad-1]
 gi|325947966|gb|EGD40083.1| bacterial extracellular solute-binding protein, family 3
           [Nocardioidaceae bacterium Broad-1]
          Length = 270

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 92/266 (34%), Gaps = 19/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----NASILGDIKKR--GFLKCGINTGLVGFAEVKAN 53
           M +  FV    L IL    FS        S          G L+ G+++     A  K +
Sbjct: 1   MNQTKFVVAGALAILGAIVFSGRLSDPAPSASDKASATVGGTLRIGVDSAEP--AYYKVD 58

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  KGFD    R+++  +  +     ++ ++  E   AL++ +ID++      T   E  
Sbjct: 59  GVAKGFDYQMARSVAEGMGAEAE---FVEMDFNELHPALRAGKIDMIGAQVTKTEEGER- 114

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +     F+  K   I S   + G +I V  GT  E  L + ++      + 
Sbjct: 115 -EFDFSAPYFVTYVSFLAPKGSTIRSREDVDGKNIAVVEGTVHERYLREQYE----DVNI 169

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +          + R    DA+        ++   +  P    I+       P+   + +G
Sbjct: 170 VKTPDAVAAVTSMRRGEADAFFYGAPYSASIIEDSPIPLTEPIVYQAQDA-PIGFVVREG 228

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D     I       +++ E L I   
Sbjct: 229 DERKQQIDGVIEDMVLSGEWLKIKTD 254


>gi|308187189|ref|YP_003931320.1| glutamine-binding periplasmic protein precursor [Pantoea vagans
           C9-1]
 gi|308057699|gb|ADO09871.1| Glutamine-binding periplasmic protein precursor [Pantoea vagans
           C9-1]
          Length = 250

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 25/248 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +L      F + + +            L  G++T  V F   + +  + GFD+D
Sbjct: 7   KLKVSLVLVACSASFIATAQD-----------KLMVGVDTAFVPFEFKQGD-KYVGFDID 54

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +       +  P++       LQS+ +D+       T  R+    + F    
Sbjct: 55  LWNAIAKKM---NVSYELRPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSDGY 109

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y       +      I   S L+G  + ++ GT      A  F     K   + F  ++ 
Sbjct: 110 YNADLLMAVKSSDTAIKKFSDLAGKKVGLKQGT-----AAASFMKSKYKADYVEFPNIDN 164

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNI 240
                +A   DA   D   +     T            D I       A+ + ++     
Sbjct: 165 AYLDLQAGNLDAVVHDSPNVLYYVKTAGNGKVKSTGETDSILPQQYGFAMQK-NSSLTPK 223

Query: 241 VSWTHYAM 248
           V+    A+
Sbjct: 224 VNAALQAL 231


>gi|271499291|ref|YP_003332316.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270342846|gb|ACZ75611.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 23/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K  F+    +I+   +             ++G ++ G++     F     NG+  GF+
Sbjct: 1   MFKKLFIVPAIIILATSSVVFA---------RQGVIRIGVDLAYSPFQTRDVNGNPAGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+  ++    +K  Y+      +  AL +++ID++      T  R+    + F  
Sbjct: 52  IDITDAICKSV---NAKCDYIVNTFDAQIPALLARKIDVI-SPLAVTPKRKE--AIDFSH 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     F+  K   +      L G +I VQ GT  E     Y+       +   +   
Sbjct: 106 YLFHVPTRFVARKGSSLLPQVDKLRGKNIAVQQGTIQETYANKYWLPAG--VNVKSYPDQ 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I    RA R D       +L    L   +  +  +    I+   L     A  I +GD
Sbjct: 164 DAIYEDLRAGRVDGALCPSVSLIFSFLQTPQGKDFELKGPEITDDGLFSIGSAYGIRKGD 223

Query: 235 TEWYNIVSWTHYAMVT 250
           TE   +++     ++ 
Sbjct: 224 TETQQLLNQGLQNIIN 239


>gi|238797420|ref|ZP_04640919.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia mollaretii ATCC 43969]
 gi|238718691|gb|EEQ10508.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia mollaretii ATCC 43969]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 13/215 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G +     F    A+G+  GFD+D  + L   I    +K  ++  +      +L++K
Sbjct: 28  VKIGTDPTYAPFESKNASGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+  +   F    +      I  K   I  ++  L G  + V  G+
Sbjct: 85  KIDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQGS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E      ++   +    + ++  + I A   + R DA   D  A     L      ++
Sbjct: 143 TQEAFANAEWQPKGID--IVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQAIGKDY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
           +     +             + + DTE    +   
Sbjct: 201 IFAGPSVKNDQFFGVGTGMGLRKDDTELKAALDKA 235


>gi|257125143|ref|YP_003163257.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
 gi|257049082|gb|ACV38266.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
          Length = 263

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 81/248 (32%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     ++ + LI LF  S              G   +K G       F     +G   G
Sbjct: 1   MKNILKITGILLIGLFLISCGGKQENSKSGSSEGKQKVKVGTEGVYAPFTFTDGSGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+    +      D   I+++P      FL L+SK+ D ++        RE      F
Sbjct: 61  YDVEVVEEIGKRANLD---IEFVPTPWDSMFLGLESKKFDFIANEIAKNPEREK--KYTF 115

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I+ K +  I ++  L G  +    G+    TL D F  +    +     
Sbjct: 116 SDDYLVSAAQIIVKKGRTDIKTLEDLKGKRVMTGVGSNYNKTLTD-FDKNKEINYAYFDG 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            V          + DA   D         T  R +   I+ + ++K+P+     +   E 
Sbjct: 175 NVSIALEEIAQGKADATLNDRLT--VGYFTKQRGNLVEIVGEPVTKTPVYFTFRKDSEEL 232

Query: 238 YNIVSWTH 245
            N ++   
Sbjct: 233 KNKINKAL 240


>gi|188527762|ref|YP_001910449.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter pylori Shi470]
 gi|188144002|gb|ACD48419.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter pylori Shi470]
 gi|308063767|gb|ADO05654.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter pylori Sat464]
          Length = 258

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIS--FFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKGIQDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAMQRLI 238


>gi|9929262|emb|CAC05301.1| mucus adhesion promoting protein [Lactobacillus reuteri]
          Length = 263

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 18/215 (8%)

Query: 1   MY--KDFFVSILCLI----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K   ++I+ L         +  + ++++  ++  +G L  G+      ++    N 
Sbjct: 1   MKFWKKALLTIVALTVGTPAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  +A++  +        ++P         L S + D++  N   T  R    
Sbjct: 60  KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           I+     I S+  + G  I    GT     +         K +  
Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKNIKGKKIIAGTGTNNANVV------KKYKGNLT 168

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                       +  R         A YA    N 
Sbjct: 169 PNGDFASSLDMIKQGRAAGTINSREAWYAYSKKNS 203


>gi|297157334|gb|ADI07046.1| arginine/ornithine binding protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 323

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 87/292 (29%), Gaps = 42/292 (14%)

Query: 1   MYKDFFVS--ILCLIILFFTSFSTN-------------------ASILGDIKKRGFLKCG 39
           M     V+  I     L  T                         S+  DI+  G +K G
Sbjct: 15  MKSKAAVAGAIAVTGALLLTGCGDQRDKTTTTTSAGDTNKAPLFGSLPKDIQSAGVIKVG 74

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +           NG   G D D   AL   +       ++         L L+S++ DI
Sbjct: 75  SDIAYPPVEFK-KNGQVVGLDPDLAAALGKVLGVK---FEFNNTKFDGLLLGLRSQRYDI 130

Query: 100 LSRNTDWTLLREI----------SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGAS 147
                     R+             G+ F    +  G      K   +GI++   L G  
Sbjct: 131 AMSAMTDNKSRQEGVDADTGKRVGKGVDFVD-YFTAGVSIYTKKGADQGITTWDDLCGKK 189

Query: 148 ICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I VQ  T ++           +    K     ++   E     RA   DA + D      
Sbjct: 190 IVVQRATVSQDLAKAQSKSCEEKGKGKIAIEAYDDDIEAQTRLRAGGADAGSSDFPVAAY 249

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              T+   ++  ++ + +  +P   A+ +G+ +  + +      ++   E  
Sbjct: 250 AVKTSGGGNDFQLVGEQVEAAPYGIAVPKGNDQLRDALKQALALIIANGEYD 301


>gi|254477975|ref|ZP_05091360.1| putative carboxycyclohexadienyl dehydratase [Ruegeria sp. R11]
 gi|214028560|gb|EEB69396.1| putative carboxycyclohexadienyl dehydratase [Ruegeria sp. R11]
          Length = 256

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 80/246 (32%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M +    + +  + L     ++  S L +I   G +K G        +        +KGF
Sbjct: 1   MKQFLKAAAVAALGLISAGGASAQSALNEILDSGVMKVGTTGDWNPMSLRDPATNSYKGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +  +   ++++P + K     + + Q   L+ +   +  R    G +  
Sbjct: 61  DIDIMTELAKDLGVE---VEFVPTDWKTLVNGVVAGQYH-LTGSASISPARMKVAGFSES 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            I+          K         ++    ++    GT  E  + ++F          V E
Sbjct: 117 YISVEMYPFTTEDKADRFDGYDSINNPDVTVATTLGTVFEKNVREWFPQA----TIKVVE 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D +         L      P   V   +  S + +A  + Q D  W
Sbjct: 173 APARGFQEVLAGRADVFITSNIEGATLTSKF--PVVRVTNAEARSPTAIAMLLPQADQVW 230

Query: 238 YNIVSW 243
            N V+ 
Sbjct: 231 INYVNN 236


>gi|251790904|ref|YP_003005625.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247539525|gb|ACT08146.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 25/261 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M++    + I+ +  +   +F+          K+  ++ G++     F     +G+  GF
Sbjct: 1   MFRKLSLLKIIVIFTISPFAFA----------KQDVIRIGVDLTFPPFQMRDEHGNPAGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+  ++    +K  Y+      +  AL +K+ID++      T  R+ S+G  F 
Sbjct: 51  DIDITDAICKSV---NAKCDYIVNTFDAQIPALLAKKIDVI-SPLGVTKKRKESIG--FS 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +     F+  K+  +   +  L G +I VQ GT  E     ++       + I +  
Sbjct: 105 DYAFHLPTRFVARKETNLLPQADMLRGKNIAVQQGTIQEAYANKHWLPAG--VNVITYPD 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            E I     A R D       AL    L      +  +    ++ + L     A  I + 
Sbjct: 163 QEAIYEDLYAGRVDGALCPSVALTFGFLQTPEGKDFELKGPEVTDTDLFSIGSAYGIRKD 222

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           DT+   +++     ++   E 
Sbjct: 223 DTDTKEMLNLGLKNIMNNGEF 243


>gi|295095886|emb|CBK84976.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 257

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 25/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  L + +    SFS+ A+          L+ G+      F    A+G+ +GFD
Sbjct: 1   MK----LRALVVGMGLLCSFSSFAAT--------ELRYGLEAEYPPFESRNASGELEGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+  A      K  ++  +       L +K+ D ++   + T  R     + F  
Sbjct: 49  IELGNAICKAA---ALKCSWVETSFDALIPGLVAKKFDAINSAMNITEQRRK--SIDFTQ 103

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +      +  +   L G +I V  G+  E    ++++ H      + ++  
Sbjct: 104 PIYRIPSQLVGKAGSAVEATPEGLKGKTIGVLQGSIQETYAKEHWEKHG--VTVVSYKDQ 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
                     R DA     +A  A  L+  +      +   +S        +   + +GD
Sbjct: 162 NMAWGDLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGD 221

Query: 235 TEWYNIVSWTH 245
                 +    
Sbjct: 222 EATKKQLDAAI 232


>gi|237737257|ref|ZP_04567738.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421119|gb|EEO36166.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 241

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 24/246 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  +++ +++L  ++ +           +  +  G N     F  +   G+  GFD
Sbjct: 1   MKKLFKKALIGMMVLSLSATA---------LAKEKIYVGTNAEFPPFEYL-EKGEITGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    +   +    ++++   +       ALQ K++D++      T  R+ ++   F  
Sbjct: 51  IELMNEMGKVL---DAEVKVQDMAFDGLLPALQMKKVDVVIAGMTATEERKKTVA--FTQ 105

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  I+ +    I S   L G  + V  G T +  +++             F   
Sbjct: 106 PYYTASQVIIVKEGDNSIKSFDDLKGKRVGVMLGFTGDTVVSEI-----EGVKVERFNAA 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +A + DA   D          N       I   + ++   A A+ + D E   
Sbjct: 161 YAGIMALKADKVDAVVLDSEPAKNYVKQNAG---LKIAEAVAAQEEYAIALRKNDKELLE 217

Query: 240 IVSWTH 245
            +    
Sbjct: 218 KIEKAL 223


>gi|218887008|ref|YP_002436329.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218757962|gb|ACL08861.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 248

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 67/215 (31%), Gaps = 12/215 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
              L    +T    F     +G + GFD++  +A++  +  +       P++       L
Sbjct: 23  AKKLVVAHDTNFKPFEFKGEDGKYTGFDIELWQAVAKIVGVEYE---LQPMDFNGIIPGL 79

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151
           Q+  ID+          R     + F    Y  G   ++ +    I SV  L G  +  +
Sbjct: 80  QTGNIDVGIAGITIKAER--QQVIDFSDPYYDSGLMILVREGDTAIKSVEDLKGKIVATK 137

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T++   +     A        +F   + +     +   DA   D+  +    +T  + 
Sbjct: 138 TATSSVDFVKACASAK----EVKLFPNNDGMFFELMSGGADAVVFDMPVVKEFAMTAGKG 193

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               + P +           +G       V+    
Sbjct: 194 KVKTVGP-LYQGQSYGIGFPKGSP-LVAKVNEALK 226


>gi|86359585|ref|YP_471477.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86283687|gb|ABC92750.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 257

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 69/231 (29%), Gaps = 14/231 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK  G  K G       F     +G   GFDV+   A+++ +        ++ 
Sbjct: 23  AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141
                    L +K+ D +      T  R+      F           I+ +    I + +
Sbjct: 80  GKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVREGDDSIKTFA 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G     Q+ T+    +A    A       +  +  ++        R DA   D  + 
Sbjct: 138 DLKGKKSA-QSLTSNFGKIATESGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              K          I  +  +       I + + E    ++    A + A+
Sbjct: 192 LDFKKHKPDAPV-KIAAEQENADYSGIIIRKNEPELLAEINKAL-AEIKAD 240


>gi|239636042|ref|ZP_04677056.1| L-cystine-binding protein TcyA [Staphylococcus warneri L37603]
 gi|239598313|gb|EEQ80796.1| L-cystine-binding protein TcyA [Staphylococcus warneri L37603]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 12/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F  I  + +L     +++       K    ++ G       F          G+D
Sbjct: 1   MKRLLFCVIALVFVLAACGNNSSKDSKSSSKDDNTIRVGTEGTYAPFTFHNKQDKLTGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 61  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINKDREKKYK--FSN 115

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     ++   +K I S + + G  +  Q  T+    LA    A          +  
Sbjct: 116 PYTYSSAVLVVRENEKNIKSFNDVKGKKLA-QTFTSNYGQLAKDKGAK-----ITKVDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      ++R DA   D  +    K          I  D            + D +   
Sbjct: 170 NQSMDLLLSNRVDATFNDSLSYLDYKKQKPNAKIKAIKGDAEKNKSAFAFSKKVDDKTVQ 229

Query: 240 IVSWTHYAMVTAEELG 255
             +     +  + EL 
Sbjct: 230 KFNDGLKKIEESGELK 245


>gi|260754694|ref|ZP_05867042.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260761740|ref|ZP_05874083.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260672172|gb|EEX58993.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260674802|gb|EEX61623.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
          Length = 179

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 9/153 (5%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M       +++   +     +  + A+ + + ++   L  G       F  +K +G   G
Sbjct: 1   MKMRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F
Sbjct: 61  FDVDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDF 115

Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
               Y    G    K   I   +   L+G +I 
Sbjct: 116 TNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 148


>gi|319780315|ref|YP_004139791.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317166203|gb|ADV09741.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 268

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 87/263 (33%), Gaps = 16/263 (6%)

Query: 2   YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            +  F SI  +++L    F     + +A  L DI K G +  G+      F+   A+   
Sbjct: 3   IRKTFASIAAVLMLGTAGFGLAVQAASADALADITKAGTINVGVFADFPPFSSASADMSL 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KG+D+D  + ++  +    + I    +  + R   L   ++D+L         +E    +
Sbjct: 63  KGYDMDVAQYIADTLKVKLNPIA---VTGQNRIPYLNDHRVDLL---MSVGYSKEREQVI 116

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F           I      +     L+  SI V  GT  + +L +   A         F
Sbjct: 117 DFAAAYAPYYIAVIGPAALAVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRF 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +    +  A+ + +             +    D          + S S +   + + +  
Sbjct: 174 DNYNSVIQAFISGQTQLMVVGNDVGAQVLAKQDALKPEQKFQLLTSPSHIG--LNKNEDG 231

Query: 237 WYNIVSWTHYAMVTAEELGITQK 259
               V+     M+   +L  + K
Sbjct: 232 LKKAVNDAVAKMLADGKLDESSK 254


>gi|116628198|ref|YP_820817.1| ABC-type amino acid transport system, periplasmic and permease
           components [Streptococcus thermophilus LMD-9]
 gi|116101475|gb|ABJ66621.1| ABC-type amino acid transport system, periplasmic and permease
           components [Streptococcus thermophilus LMD-9]
          Length = 736

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 63/210 (30%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L ++   F   +  ++          +    +T    F    ++  +KG D
Sbjct: 1   MKKKLLTLFLSVMSALFVFGAKASAS--------TISVVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRKNWD---VNQTYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +S   QL G ++ V+ GT  +  L     A    +    F+  +
Sbjct: 108 TYYDTSIVIYTRSNDKVSDYKQLKGKTVGVKNGTAAQTWLDKN--ASKYSFTVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  +    A   D   +         
Sbjct: 166 LMNNSLDSGSVYAAMDDTPVVQYAIGQGKD 195



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 7/174 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +++    F     +G + G DVD   A++    +    ++           A+QS Q
Sbjct: 283 TISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNAVQSSQ 339

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   I     L G ++  + GT++
Sbjct: 340 ADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVKKGSNIKKYEDLKGKTVGAKNGTSS 397

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
              L +    +        ++    +  +  +   D+   D + L         
Sbjct: 398 YSWLEENADKYGF--TLRAYDEASTMYDSLNSGSIDSLMDDEAVLLYAIQQGRN 449


>gi|330836703|ref|YP_004411344.1| extracellular solute-binding protein family 3 [Spirochaeta
           coccoides DSM 17374]
 gi|329748606|gb|AEC01962.1| extracellular solute-binding protein family 3 [Spirochaeta
           coccoides DSM 17374]
          Length = 258

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 75/246 (30%), Gaps = 12/246 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L + ++   +     S     K++       N        V  NG+  G++
Sbjct: 1   MKTKTLALLLIISLVSVMAVGAAGSK-ESSKEKTSYVFAANAAWPPLEYVDENGNVVGYE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + +  A+           +     F  L +   D ++     T  R+ ++   F  
Sbjct: 60  IELIQEIGKAVGK---TFTIRNVAWDGIFAGLANGAYDGIASGVSVTEERKATM--DFST 114

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 Q  I+     GISS   L G  + VQ GTT  + L D +           ++ +
Sbjct: 115 PILQVKQAIIVRSGTTGISSGDDLVGKKVGVQIGTTGHIALEDTYGKA---ITIRAYDEI 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237
                       DA   D        L N        V          +A  + +G+   
Sbjct: 172 GLAIEDMLNGNLDAAVADSIIASDFVLANKNYQGKLFVSGEASSIAEDIAIVVPKGNVYL 231

Query: 238 YNIVSW 243
             +V+ 
Sbjct: 232 LGLVND 237


>gi|260778079|ref|ZP_05886972.1| hypothetical amino acid ABC transporter amino acid-binding protein
           [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606092|gb|EEX32377.1| hypothetical amino acid ABC transporter amino acid-binding protein
           [Vibrio coralliilyticus ATCC BAA-450]
          Length = 257

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 26/254 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V      +L   +F+              ++   +     F     +G+  GFD
Sbjct: 1   MKKVLSVIACTATLLSTPTFAKQ------------VRLASDFTYPPFNYKDQSGNPTGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   AL +    D     ++  N      +L +++ D++  +   T  R+    + F  
Sbjct: 49  IEIADALCAEAKLD---CTWVAQNWDSLIPSLLARKSDVIMASMRITEERKK--RVLFTN 103

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y     F+      +  S   +    I VQ GT  +  + D F           +   
Sbjct: 104 KYYQTPARFVTATDAKVDISAQGMKDKVIGVQGGTIHDRYVTDKF---GDVAEIKRYTGQ 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +E+       R D   G+   L    L  D       +   ++         A A+ Q D
Sbjct: 161 DEVYIDMVNGRLDLTFGNSDQLALAFLAKDIGQGFKFVGQPVTDKAYIGEGTALALRQND 220

Query: 235 TEWYNIVSWTHYAM 248
                  +    A+
Sbjct: 221 KALAEKFNKAIVAI 234


>gi|228477416|ref|ZP_04062052.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus salivarius SK126]
 gi|228250851|gb|EEK10039.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus salivarius SK126]
          Length = 282

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 70/256 (27%), Gaps = 18/256 (7%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K FF    + +  + ++  +S ST       I+KRG +K      L   +      + 
Sbjct: 1   MKKRFFAVFSLILAAVFLVACSSQSTGEKNWEKIEKRGSIKVATAGTLYPQSYHDDKNNL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DV+  + +   +     KI +  +       A+ S Q+D    N       +     
Sbjct: 61  TGYDVEILKEVGKRL---KLKIDFTEMGVDGMLTAVNSGQVD--IANYSLEDDNKNVKKF 115

Query: 117 AFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                  +     ++      GISS   L G      A T               +    
Sbjct: 116 LRSEPYKYSFTSMVVRESDNSGISSWKDLKGKKAAGAASTKYMKIAKKM----GAELVVY 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQ 232
                +         R D    D                 V + D I  +P   +     
Sbjct: 172 DNVTNDVYMQDLVNGRTDVIVNDYYLQKMAVAAIKDKYP-VKINDGIYSNPYSTSFTFSL 230

Query: 233 GDTEWYNIVSWTHYAM 248
            +      V+     M
Sbjct: 231 KNKTLQEKVNKAIKDM 246


>gi|329297838|ref|ZP_08255174.1| extracellular solute-binding protein family 3 [Plautia stali
           symbiont]
          Length = 250

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 84/248 (33%), Gaps = 25/248 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L      F + + +            L  G++T  V F   + +  + GFD+D
Sbjct: 7   KLKITLALVACSASFIAAAQD-----------KLTVGVDTAFVPFEFKQGD-KYVGFDID 54

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  +       +  P++       LQS+ +D+       T  R+    + F    
Sbjct: 55  LWDAIAKKM---NVSYELHPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSNGY 109

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y       +      I   S L+G  + ++ GT     +   +KA+      + F  ++ 
Sbjct: 110 YDADLLMAVKSDDNSIKKFSDLTGKKVGLKQGTAAASFMKSKYKANY-----VEFPNIDN 164

Query: 182 IDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                +A   DA   D    LY +K   D   +     D I       ++ + ++     
Sbjct: 165 AYLDLQAGNLDAVVHDSPNVLYYVKTAGDGKVKASGENDTILPQQYGFSMQK-NSSLTPK 223

Query: 241 VSWTHYAM 248
           ++    A+
Sbjct: 224 INAALQAL 231


>gi|239818081|ref|YP_002946991.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239804658|gb|ACS21725.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 252

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 9/214 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L    +     FA    +    GFD+D   A++        KI+ +       F AL +
Sbjct: 27  ELIVASSATYAPFAFENKDKQIVGFDIDIINAIARQ---QGLKIKVVNTPFTGIFGALNN 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +D++         R+      F P  +   Q   + K   ++S+  L+G  I V + +
Sbjct: 84  GDVDLVISGVTINEKRK--QSYDFTPPYFAARQLIALPKGSTVASLKDLAGKKIAVVSAS 141

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +   +  F       +   FE    I +       DA  GD   +         P   
Sbjct: 142 TADDIASREFGK--TSPNIRRFESTPLIISELAGGGVDAAMGDNGVIAYRVAQ--NPELK 197

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +      +      + +GD    + ++    A+
Sbjct: 198 TLDDKSFPEEGFGIVVKKGDKALLDKLTAGLAAI 231


>gi|119475375|ref|ZP_01615728.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [marine gamma proteobacterium HTCC2143]
 gi|119451578|gb|EAW32811.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [marine gamma proteobacterium HTCC2143]
          Length = 268

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 11/243 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   V    L+ L   +    A    DI   G L+ G++     +     +G   G ++
Sbjct: 5   IRAILVVCTVLVSLSVIASEEQARNFDDIVASGELRIGVSI-FPPWVMRAKDGQLIGSEI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + L++ +   P    Y     K    AL +K+IDI+         R  ++ + F   
Sbjct: 64  DMAKRLAADMGLKPELALY---EWKALITALNAKEIDIIISGMGINPAR--AMQVNFSRP 118

Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               G G   +        S+ +L   +I +     T    AD       + +   F   
Sbjct: 119 YGDAGVGLAANTALTSTFKSMDELKQPNINIGVIANTVS--ADVATRLFSRTNIKAFATE 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A    +  A+ G       L L      +  +   ++S      A+ +GD+++ N
Sbjct: 177 DEAQDALINGKLHAFIGANPLPAFLALKYPGKVDVPLEKPLLSFKE-GLAVRKGDSDFLN 235

Query: 240 IVS 242
            ++
Sbjct: 236 YLN 238


>gi|312869289|ref|ZP_07729456.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095163|gb|EFQ53440.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 502

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 79/226 (34%), Gaps = 15/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             L  IK++G L  G + G   F          ++ GF++   R L+  +      ++  
Sbjct: 48  DSLQKIKQKGVLVVGTSAGYPPFEFTTKKDGKTEYVGFEMSLARQLAKDLGVK---LEIK 104

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISS 139
            ++     +AL+S +ID+     + T  RE    + F    +   + F++HK+       
Sbjct: 105 NMDFDSLLVALESHKIDVAIAGINITPEREK--SVDFSKTYHKGTKYFLIHKQDKDKYKD 162

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                G ++  + G      +  Y        H     +   +  A +AH+ D    D +
Sbjct: 163 YMDFKGKTVGTENGAMEYAMIKKYIP----DVHEKGLAKWSSLVIALQAHKLDGVLMDSA 218

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              A    N           + S   +A A+ +G       V+ T 
Sbjct: 219 TAKAFAQNNSDLYAFNSHMKVTSDG-VAVALPKGANSLKAAVNKTV 263


>gi|125624721|ref|YP_001033204.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|62421458|gb|AAX82492.1| GlnP [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493529|emb|CAL98510.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071518|gb|ADJ60918.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 714

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 15/236 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K FF   L    +     + +      +K    +K   ++    F        W G D
Sbjct: 1   MKKLFFALALMFATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++     +  K++            L++ Q+D +      T  R+      F  
Sbjct: 55  VDVMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGVIAGMTITDERK--DTFDFSN 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   ++  S+L G ++  + GT  +  L +  K +    +   +    
Sbjct: 110 PYYTSALTIATTKDSKLTDYSELKGKAVGAKNGTAAQTWLQENQKKYGY--NIKTYSDGV 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            + A+  +        ++  +                P I        A+++G  +
Sbjct: 168 HMFASLSSGNIVGAMDEVPVI--SYAMKQGQDLATNFPSISLSGGYGFAVMKGKNQ 221



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 66/221 (29%), Gaps = 11/221 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+       +     F     N  + G DVD   A++    +   K+++  +  +    +
Sbjct: 258 KKDVYTIASDNSFAPFEFQNDNKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           +QS   D +      T  R+      +    Y              I S   L G ++  
Sbjct: 315 VQSGHADGMMSGMSITDARK--QVFDYGNPYYSSNLTIATSSTDDSIKSWKDLKGKTLGA 372

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + GT +   L D+ K +        F     + ++      +A   D   +   K    +
Sbjct: 373 KNGTASFDYLNDHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQ 427

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             +       I       A+ +G       +     A + A
Sbjct: 428 GQKFTTPIKPIPDGQYGFAVKKGSNPELIEMFNNGLANLRA 468


>gi|293605652|ref|ZP_06688031.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292815936|gb|EFF75038.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 267

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 85/256 (33%), Gaps = 18/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L  + +     ++ A       +   L    +T  V F   + N  + GFD
Sbjct: 18  MIKRKVAAALVGLSVAMFGAASGAQA-----QGKELVVATDTAFVPFEFKQGN-TYVGFD 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +     K +  P++       LQ+K ID            +    + F  
Sbjct: 72  VDLWAAIAKEL---NLKYKLQPMDFNGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 126

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +  K   I     LSG ++ V+ GT T     D+ KA        +F  +
Sbjct: 127 PYYESGLAILVGEKNTDIKDAKSLSGKTVAVKTGTATV----DFLKAQVPDAKLKLFPNI 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T  +     ++  + S      A  +G +E   
Sbjct: 183 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGSVKSGDFYGIAFPKG-SELVP 240

Query: 240 IVSWTHYAMVTAEELG 255
            V+    A+    +  
Sbjct: 241 QVNKALAALKANGQYD 256


>gi|325293912|ref|YP_004279776.1| nopaline ABC transporter substrate-binding protein [Agrobacterium
           sp. H13-3]
 gi|325061765|gb|ADY65456.1| nopaline ABC transporter, substrate binding protein [Agrobacterium
           sp. H13-3]
          Length = 264

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 24/228 (10%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L  G       ++   A G+  GFD D    L + +     K +++         A
Sbjct: 21  AEGELSIGTEGAYPPWSMADAAGNVTGFDADVGNLLCTKL---AVKCRFVVQAFDGLIPA 77

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-------LS 144
           L++K+ D++      T  R+    + F          F++ K   ++ +         L 
Sbjct: 78  LKAKRFDVIISGMSITQDRKK--EINFSVGYAELANMFLVPKTSDLAGIKDIDTLLKGLD 135

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G +I VQ GTT    +       N       ++ ++ +     + R +A   D SAL   
Sbjct: 136 GKTIGVQTGTTHAHFIEKRVPNAN----LKTYDTLDNMQIDLASGRVEAAFADASALQDF 191

Query: 205 KLTNDRPSEHVILP-------DIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   +   +        D      +   I + +TE    +    
Sbjct: 192 LAK-PEGKDFQFVDVKVQSKFDSTLGEGIGVGIAKENTELKTKIDKAL 238


>gi|308062255|gb|ADO04143.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter pylori Cuz20]
          Length = 258

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIS--FFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDLKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKRQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAMQRLI 238


>gi|302561350|ref|ZP_07313692.1| ABC transporter substrate-binding protein [Streptomyces
           griseoflavus Tu4000]
 gi|302478968|gb|EFL42061.1| ABC transporter substrate-binding protein [Streptomyces
           griseoflavus Tu4000]
          Length = 283

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 81/256 (31%), Gaps = 25/256 (9%)

Query: 3   KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGF-AEVK 51
           +    +     ++   + ++           A  +  +K  G L    +     F +E+ 
Sbjct: 10  RVLAATTATAGLVLLAACTSTDDGGSGSKTAAGGVELVKA-GQLTTCTHLPYPPFQSEID 68

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G  +GFDV     ++  +     +I   P    +    L S + D+ +     T  R+
Sbjct: 69  --GKVQGFDVALIDLVADDLGVK-QQILDTPFENFKTGAFLNSGECDLAAAGMTITDERK 125

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169
               + F    +   Q  ++ K  G+ S++ +      +  QA TT E        A   
Sbjct: 126 K--NVDFSDPYFNATQAVLVDKGSGVGSLADVKAKNVKLGAQAQTTGEDY------AKGQ 177

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            + P+ FE  + +    R  +  A   D   +              +   I +       
Sbjct: 178 GFDPVSFESSDAVLNGLRTGQVKAVVIDYPVVQGWLKDKANADAFRVAEQIDTGEEYGFT 237

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+T     +    
Sbjct: 238 VKKGNTALREAIDKAL 253


>gi|324994617|gb|EGC26530.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|327462473|gb|EGF08797.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327474328|gb|EGF19734.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|327489715|gb|EGF21505.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 729

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGVTAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L          +    F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKN--KDKYDFTLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 70/236 (29%), Gaps = 14/236 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +       ++    F     +  + G D++  +A++         ++           ++
Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q+ Q D +      T  R+ +    +    Y       +     I S  +L G ++ V+ 
Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT ++  L +    +        F     +  +       A   D   +        +  
Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
               L   I  +P    A          ++   +  +   +E G  Q+ +++    
Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLAS 499


>gi|15903163|ref|NP_358713.1| amino acid ABC transporter permease/amino acid-binding protein
           [Streptococcus pneumoniae R6]
 gi|15458747|gb|AAK99923.1| ABC transporter membrane spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 69/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +D +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMDDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|254254941|ref|ZP_04948258.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124899586|gb|EAY71429.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 260

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 76/257 (29%), Gaps = 23/257 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L L      +                ++  ++           +G   GF 
Sbjct: 1   MKQWMATLALTLAAGTAHAGDWTG---------KEIRVAVDPTYPPLEYKLPDGTLTGFG 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +    ++  ++  +       L +++ D+++ +   T  R     +AF  
Sbjct: 52  VDITNALCAQL---RARCVWVESSFDGMIPGLLARKFDVIASSMTITPKR--MQQIAFTN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K    + S + L G  + V+ G+         ++        + ++  
Sbjct: 107 RISNAPARLIARKGSPLLPSAASLKGKRVGVEQGSAQADYAIANWQPAG--AQIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           E + A     R DA      A     L   +  +   +   I  +          + + D
Sbjct: 165 ELVYADLVTGRLDAAFQASIAASDGFLKKPQGKDFTFVGAPIDDAKYFGQGDGLGLRKQD 224

Query: 235 TEWYNIVSWTHYAMVTA 251
            E     +    A + A
Sbjct: 225 GELREAFNRAL-ATILA 240


>gi|259505861|ref|ZP_05748763.1| ABC amino acid transport system, secreted component
           [Corynebacterium efficiens YS-314]
 gi|259166535|gb|EEW51089.1| ABC amino acid transport system, secreted component
           [Corynebacterium efficiens YS-314]
          Length = 355

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 12/219 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +I +RG L  G++      +     +G  +GF+V   + ++  IF +P  + +  + A +
Sbjct: 93  EIFQRGRLIVGVDQSKNLLSFRDPVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAGD 152

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               L    +D++ R+   T  R   +   F           ++    GI  +  L+G +
Sbjct: 153 SLRGLSRGDVDMVIRSVSVTEDRLRRM--EFSTPYMRTQTRLLVMDNSGIQGIEDLAGNT 210

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV  G+T                  +      +   A +  +  A  GD + L  +   
Sbjct: 211 VCVADGSTALQKTRAMAPE----SSILRTRNWSDCLMALQQQQAQAILGDDAVLAGIAAQ 266

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWT 244
           +       ILP I++    A AI       +   +V   
Sbjct: 267 DP---YTRILPSILAWESYAVAIAPSRASRDTTGLVRQV 302


>gi|186474788|ref|YP_001856258.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184191247|gb|ACC69212.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 263

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 14/223 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G+      F    ANG+ +GFD+D   A+         K  ++  +      ALQ +
Sbjct: 30  LRYGLEAQYPPFESKGANGELQGFDIDIGNAVCK---TANLKCSWVETSFDGLIPALQGR 86

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           + D ++   + T  R     + F  + Y      I  K  G+  +   L G  + V   +
Sbjct: 87  KFDAINSAMNATEKR--RQAIDFTNVIYRVPTQLIARKDSGLQPTPESLKGKRVGVLQAS 144

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E     ++++  +    + ++   ++ A   A R DA      A     L+     + 
Sbjct: 145 IQETYAKAHWESAGVA--VVPYQDQNQVYADLVAGRLDATLVLAPAGQTGFLSRPDGKDF 202

Query: 215 VILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             + + +         +A  I +GDT   N ++    A V +E
Sbjct: 203 AFVGEPVRDDKILGSGIAFGIRKGDTALRNQLNAAI-AKVQSE 244


>gi|123443060|ref|YP_001007034.1| glutamine ABC transporter periplasmic protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|238761029|ref|ZP_04622006.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC
           33638]
 gi|238761282|ref|ZP_04622258.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC
           33638]
 gi|332161056|ref|YP_004297633.1| glutamine ABC transporter periplasmic protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122090021|emb|CAL12878.1| putative glutamine-binding periplasmic protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|238700256|gb|EEP92997.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC
           33638]
 gi|238700509|gb|EEP93249.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC
           33638]
 gi|318604933|emb|CBY26431.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325665286|gb|ADZ41930.1| glutamine ABC transporter periplasmic protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 247

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 13/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   + +  + GFD+D   A++  +     K    P++      A
Sbjct: 23  AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKL---DLKYTLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+K +D+       T  R+    + F    Y  G   ++      I   + L+G  + V
Sbjct: 79  LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKANNNDIKGEADLAGKVLAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +     DY KA+        F  ++           DA   D   +     T   
Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGNADAVLHDTPNILYFIKTAGN 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +   + D I       A  QG ++    V+    ++  
Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLREKVNAALKSLKE 230


>gi|320008606|gb|ADW03456.1| extracellular solute-binding protein family 3 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 319

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 74/238 (31%), Gaps = 20/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              +K G +K G N        V  NG   G D D   AL   +       ++   +   
Sbjct: 60  EKYQKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDLAEALGKQLGVK---FEFTSGSFDG 115

Query: 88  RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHKKKG-- 136
              AL + + DI   +      R+            G+ F    +  G      K     
Sbjct: 116 LITALNTGRHDIAMSSITDNKQRQEGLDDSGKKLGKGVDFVD-YFLAGTAVYTKKGNPEG 174

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCD 192
           I S+  L G    VQ GTT E  L    KA             FE   E     ++    
Sbjct: 175 IKSIEDLCGKGAAVQRGTTYEKALQKQSKACTDGGKKAVDIQSFENDTEAQTRVKSGGAV 234

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A   D      L    +   +  ++ + +   P   A+ + +TE  + +     A++ 
Sbjct: 235 AGVNDYPVALDLARKANGGKDFEVVGEQVDAGPFGIAVNKDNTELRDALKEAVDAIIA 292


>gi|282851008|ref|ZP_06260382.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111018|ref|ZP_07712415.1| amino acid ABC transporter, permease/substrate-binding protein
           [Lactobacillus gasseri MV-22]
 gi|282557960|gb|EFB63548.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066172|gb|EFQ46512.1| amino acid ABC transporter, permease/substrate-binding protein
           [Lactobacillus gasseri MV-22]
          Length = 498

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 12/228 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78
              S+L  IKK G L  G +                 + G D++  + ++  +      +
Sbjct: 36  AEGSVLKKIKKSGELVVGTSADYPPLEFTASENGKTKYVGVDIELAKDIAQDLGVK---L 92

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137
               ++     +AL++ ++D++      T  R+ S+  +            +  K     
Sbjct: 93  VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 152

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S+  L G +I  Q G+     +    K            ++  +  A ++ +  A   +
Sbjct: 153 TSIQSLKGQAIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 208

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +      N+     V      ++S  A AI +G  E    V+ T 
Sbjct: 209 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 255


>gi|167840666|ref|ZP_02467350.1| ABC transporter, solute-binding component [Burkholderia
           thailandensis MSMB43]
          Length = 284

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 75/247 (30%), Gaps = 18/247 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M+K     +L L  +F  + +        +L  IK    +          F  V  NG  
Sbjct: 1   MHKSVRRFVLALSGVFTLAAAAPVLAQDDLLARIKSNKEITVATEARYAPFEYVD-NGKI 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D D    +  ++     K++ L L  +     L +K+ DI+         R      
Sbjct: 60  VGYDADLMAYVLKSL--PDVKVKQLDLPFQGLLPGLDAKRFDIVVTAVTVNKDRADHFA- 116

Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----- 170
            F         G ++      I S + L+G  +  Q G+     L    K          
Sbjct: 117 -FTLPVADATTGVLLRANESAIKSPNDLNGKVVGSQTGSAQLQALVALDKKLKEAGGLGI 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPA 229
                +   +E  A     R DA     S      L   RP    +LP  I  KS  A  
Sbjct: 176 KQIKQYVSFDEAYADLAVGRLDAVA--QSVANLGPLMKSRPGVFTLLPQTIGPKSYFAWV 233

Query: 230 IIQGDTE 236
             +    
Sbjct: 234 ARKDADS 240


>gi|223932270|ref|ZP_03624273.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|223898951|gb|EEF65309.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
          Length = 732

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++ +FF            +K    +    +     F    ++  +KG D
Sbjct: 1   MKKKLLMLLASVLPVFFIFTG--------VKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++       ++             A+Q+   D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRSGWTMTQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +         K   ISS   L G ++ V+ GT  +  L +    +    +   F+  +
Sbjct: 108 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D + +         
Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195



 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAEQ---Q 314

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KAKYGYTLKAFDEASSMYDSLNSGSIDAL 430

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253
             D      L     +                  A+ +G + E   + +    A+V + +
Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487

Query: 254 LG 255
             
Sbjct: 488 YD 489


>gi|269966667|ref|ZP_06180746.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
 gi|269828734|gb|EEZ82989.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
          Length = 272

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 19/255 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L L I   T    + +   +  IK+RG L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKATITALLGLAIAMPTIAKEDVATTNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L+        K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F       G     +K+        S        I  + G  T     + F        
Sbjct: 115 LFTEAYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F+   +           A            + +      +   + +S+   A A+  
Sbjct: 171 ILQFDDDVQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSQGNEAFAVRL 229

Query: 233 GDTEWYNIVSWTHYA 247
           G+ +     +    A
Sbjct: 230 GEEDKKAFFNKWIEA 244


>gi|261404062|ref|YP_003240303.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261280525|gb|ACX62496.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 482

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 102/296 (34%), Gaps = 18/296 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   + F+V +  L+++       + S  G+       + G +     F    A+G + G
Sbjct: 1   MKSLRVFYVFMSLLLLMAVGVPYGSVSAAGEPASGKTYQIGTDVTFAPFEFQDASGKFVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D   A++        K +  PL       AL++ Q+D +      T  R+      F
Sbjct: 61  IDMDLLDAIAKD---QNFKYEIKPLGFNAAVQALEANQVDGVIAGMSITDERK--QKFDF 115

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +  G    + + +  I S   L G  + V+ GT            +      + F+
Sbjct: 116 SDPYFDSGVVMAIRQDQESIKSYEDLRGKKVAVKTGTEGYSFAESISSKYGF--TIVPFD 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236
              ++    +     A   D   L       ++ +   I+ ++   +    A+ +G  + 
Sbjct: 174 DSAQMYDDVKTGNSVACFDDFPVLA---YGVEQNNGLKIVTEMEPGASYGFAVSKGRNQE 230

Query: 237 -WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF-LGIDKSSNIGEALG 290
                 +       + E   I +K I + +    N    R+ L ++   ++ + LG
Sbjct: 231 LLQKFNAGLVNLKASGEYDRIKEKYIGENAVSAPNQS--RWGLIVESLPSLLKGLG 284


>gi|182684032|ref|YP_001835779.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|303254264|ref|ZP_07340373.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|303258876|ref|ZP_07344855.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|303261559|ref|ZP_07347506.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|303264230|ref|ZP_07350150.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|303266139|ref|ZP_07352032.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|303268134|ref|ZP_07353934.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|182629366|gb|ACB90314.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|301801904|emb|CBW34628.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           INV200]
 gi|302598758|gb|EFL65795.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|302637139|gb|EFL67627.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|302639819|gb|EFL70275.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|302642351|gb|EFL72698.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|302644309|gb|EFL74563.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|302646042|gb|EFL76269.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVSVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|51595717|ref|YP_069908.1| ABC transporter, periplasmic arginine-binding protein artI
           [Yersinia pseudotuberculosis IP 32953]
 gi|108806635|ref|YP_650551.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Antiqua]
 gi|108812793|ref|YP_648560.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Nepal516]
 gi|145599619|ref|YP_001163695.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Pestoides F]
 gi|149366608|ref|ZP_01888642.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           CA88-4125]
 gi|153950797|ref|YP_001401591.1| arginine ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162419947|ref|YP_001606088.1| arginine ABC transporter periplasmic substrate-binding protein ArtI
           [Yersinia pestis Angola]
 gi|165924719|ref|ZP_02220551.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165938940|ref|ZP_02227493.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009784|ref|ZP_02230682.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211357|ref|ZP_02237392.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167400130|ref|ZP_02305648.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167419732|ref|ZP_02311485.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167424104|ref|ZP_02315857.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|170024936|ref|YP_001721441.1| cationic amino acid ABC transporter periplasmic binding protein
           [Yersinia pseudotuberculosis YPIII]
 gi|186894793|ref|YP_001871905.1| cationic amino acid ABC transporter periplasmic binding protein
           [Yersinia pseudotuberculosis PB1/+]
 gi|218928499|ref|YP_002346374.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           CO92]
 gi|229841313|ref|ZP_04461472.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843416|ref|ZP_04463562.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229895789|ref|ZP_04510959.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229903208|ref|ZP_04518321.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270487000|ref|ZP_06204074.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Yersinia pestis KIM D27]
 gi|294503343|ref|YP_003567405.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Z176003]
 gi|51588999|emb|CAH20617.1| ABC transporter, periplasmic arginine-binding protein artI
           [Yersinia pseudotuberculosis IP 32953]
 gi|108776441|gb|ABG18960.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Nepal516]
 gi|108778548|gb|ABG12606.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Antiqua]
 gi|115347110|emb|CAL20003.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           CO92]
 gi|145211315|gb|ABP40722.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Pestoides F]
 gi|149290982|gb|EDM41057.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           CA88-4125]
 gi|152962292|gb|ABS49753.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pseudotuberculosis IP 31758]
 gi|162352762|gb|ABX86710.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis Angola]
 gi|165913087|gb|EDR31711.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923779|gb|EDR40911.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165991180|gb|EDR43481.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207128|gb|EDR51608.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962473|gb|EDR58494.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167050838|gb|EDR62246.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167056953|gb|EDR66716.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtI [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169751470|gb|ACA68988.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis YPIII]
 gi|186697819|gb|ACC88448.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Yersinia pseudotuberculosis PB1/+]
 gi|229678978|gb|EEO75081.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229689763|gb|EEO81824.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697679|gb|EEO87726.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700712|gb|EEO88741.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262361383|gb|ACY58104.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           D106004]
 gi|262365080|gb|ACY61637.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           D182038]
 gi|270335504|gb|EFA46281.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Yersinia pestis KIM D27]
 gi|294353802|gb|ADE64143.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           Z176003]
 gi|320015798|gb|ADV99369.1| arginine transporter subunit; periplasmic-binding component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 243

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 12/214 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +  D     +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEMQAD---CTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTQPYYDNSALFIAQK-DKVADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L       + +   + ++  +      +  R DA  GD + +      ND+    
Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQNDQLAAV 191

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +       + L  A+ Q +TE    +     
Sbjct: 192 GDKVTDADYFGTGLGIAVRQSNTELQGKLDAALT 225


>gi|91225415|ref|ZP_01260537.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
 gi|91189778|gb|EAS76051.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
          Length = 272

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 19/255 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   K    ++L L I   T    + +   +  IK+RG L+ G++T  V +A     G+ 
Sbjct: 1   MKLFKATITALLGLAIAMPTIAKEDVATTNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF++D  + L+        K++++P        AL +K+ D++      T  R  S  +
Sbjct: 60  IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114

Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F       G     +K+        S        I  + G  T     + F        
Sbjct: 115 LFTEAYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            + F+   +           A            + +      +   + +S+   A A+  
Sbjct: 171 ILQFDDDVQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSQGNEAFAVRL 229

Query: 233 GDTEWYNIVSWTHYA 247
           G+ +     +    A
Sbjct: 230 GEEDKKAFFNKWIEA 244


>gi|225870779|ref|YP_002746726.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
 gi|225700183|emb|CAW94346.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus equi subsp. equi
           4047]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 17/211 (8%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M        +  L ++  T+   +A  +  +          +T    F    ++  +KG 
Sbjct: 1   MKNTLKAWMLAMLSVVLMTAGIASAETIDIV---------SDTAYAPFEFKDSDQVYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    ++     +   I            A+QS Q D L   T  T  R+      F 
Sbjct: 52  DVDIINEVAKRKGWN---INMTFPGFDAAVNAIQSGQADALMAGTTITAARQKV--FHFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y         K   I   S+L G ++ V+ GT  +  L  Y K++        F+  
Sbjct: 107 DPYYDTKIVIATRKANPIKKYSELKGKTVGVKNGTAAQAFLDKYKKSYGY--TVKTFDTG 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + +  +      DA   D   +         
Sbjct: 165 DLMYNSLATGSIDAVMDDEPVIQYAINQKQD 195



 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 11/222 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
             K   ++    F     +G++ G D+D  +A++         I+           A+Q+
Sbjct: 271 VYKIVADSSFAPFEFQIGSGEYVGIDMDLIKAIAKQ---QGFTIEISNPGFDAALNAVQA 327

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R       F    Y       +     I S   L G  +  + GT
Sbjct: 328 GQADAVIAGMSITPAR--REIFDFSDSYYTSNIRLGVKSGSSIKSYKDLKGKIVGAKKGT 385

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L      +        F+    +  +  +   D    D      L+    R  + 
Sbjct: 386 ASYDFLESNKDIYGY--RLKAFDEASSMYDSLNSGSIDGLMDDE---AILRYAIQRGHKL 440

Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255
            I            A+ +G + E   + +    A+  + +  
Sbjct: 441 DIPIKGEPSGEYGFAVKKGANPELIEMFNNGLAALKASGKYD 482


>gi|322376796|ref|ZP_08051289.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M334]
 gi|321282603|gb|EFX59610.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M334]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKAHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTSD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 66/225 (29%), Gaps = 16/225 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    S   +      +       L  I  +       ++    F    +N  + G D+
Sbjct: 241 KKWTASSSSAVPTTTTLAG------LKAIPVKAKYIIASDSSFAPFVFQNSNNQYTGIDM 294

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A++     +   I+           A+Q+ Q D +      T  R+ +    F   
Sbjct: 295 ELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT--FDFSES 349

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     F     
Sbjct: 350 YYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKTFADGSS 407

Query: 182 IDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           +  +      DA   D        +       P     + +    
Sbjct: 408 MYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452


>gi|90962512|ref|YP_536428.1| amino acid ABC transporter [Lactobacillus salivarius UCC118]
 gi|90821706|gb|ABE00345.1| Amino acid ABC transporter [Lactobacillus salivarius UCC118]
          Length = 499

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 33/269 (12%)

Query: 1   MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42
           M   K   + +  L+++     +                T    L  +K++G L  G++ 
Sbjct: 1   MKIFKKILMLLAVLMMVVTPFAAITADTTSSSSSADTAKTTDDSLKKVKEKGTLVVGLSA 60

Query: 43  GLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
               +          ++ G D+   +  +  +      +    +N     +AL++ +ID 
Sbjct: 61  DYPPYEFTTKQDGKTEYVGIDIQIAKKFAKDLGVK---LVIKNMNFDSLLVALETGKIDT 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTE 157
           +    + T  R     + F  I Y  G+  +++K  K   +S     G ++  Q GT   
Sbjct: 118 IISAMNPTEERRK--SVDFSNIYYSGGKYIVINKKDKSKYTSKESFKGQTVGAQNGTLEY 175

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +   F             ++  +  A ++ +      +     A    N         
Sbjct: 176 NLIKQQFP----GATVKGLAKLNNLIIALQSGKVSGVLMEEPTAKAYVQNNPNLYAFNSK 231

Query: 218 PDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
             +       A A  +G T      + T 
Sbjct: 232 VSVDVNETGAAMAFPKGATALTQAANKTI 260


>gi|312865954|ref|ZP_07726175.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus downei F0415]
 gi|311098358|gb|EFQ56581.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus downei F0415]
          Length = 731

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 34/298 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L ++  FF             +    +    +T    F    ++  +KG D
Sbjct: 1   MKKKLLALMLSVLSAFFIFSG-------KAQAAEKISIVSDTAYAPFEFKDSDQTYKGID 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++     D  +             A+QS Q   L   T  T  R+      F  
Sbjct: 54  VDIIKEVAKRSGWDYKQ---TYPGFDAAVNAVQSGQASGLMAGTTVTDARKKV--FDFSD 108

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y              ++S  QL G ++ V+ GT  +  L  +   +        F+  
Sbjct: 109 TYYDTSIVVYTKSGTTSVTSYDQLKGKTVGVKNGTAAQDWLDQHADQYGYS--VKTFDTS 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + ++ +      DA   D   +           ++ +  +  S    A  + +G    Y 
Sbjct: 167 DLMNNSLDQGAVDAAMDDKPVVQYAIQQGK---QYDMSMEGESVGSFAFGVKKGGKNEYL 223

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG---IDKSSNIGEALGLTKD 294
           I                 +         T +  ++++LG    + S     +L LT D
Sbjct: 224 I-------------KDFNKALAAMKKDGTYDKIMKKWLGDSVNENSKTPSASLHLTGD 268



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 13/227 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +K    +    ++    F    ++G + G DV+  +A++        K++          
Sbjct: 276 VKDSYTIVL--DSSFAPFEFQNSSGGYTGIDVELIKAIAKE---QGFKVKLQYPGFDAAL 330

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
            A+QS Q D +      T  R+ +    F    Y       +     +S  + L G ++ 
Sbjct: 331 NAVQSSQADGVIAGMTITDERKAT--FDFSDPYYSANTILAVPADSKVSKYADLKGKTVG 388

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + GT +   L    +A    Y    ++    +  + +    DA   D      LK    
Sbjct: 389 AKKGTASYDWLTQ--RAGQYGYTVRAYDDGSTLYDSLQNGSVDAMMDDE---AVLKYAIK 443

Query: 210 RPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
           +  +            +  A+ +  + E   + +    ++V + +  
Sbjct: 444 QGRKFKTPIKGEKSGDVGFAVKKGSNPELVQMFNNGLASLVKSGKYD 490


>gi|307706697|ref|ZP_07643503.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307617941|gb|EFN97102.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL G ++ V+ GT  +  L          +    F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISQYDQLKGKTVGVKNGTAAQRFLETI--KDKYSFTIKTFDTSD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 72/232 (31%), Gaps = 19/232 (8%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+ +         A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEIINPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           F     +  +      DA   D   L        +      L   I  +P+ 
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQK------LKTPIPGTPIG 447


>gi|116629207|ref|YP_814379.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri ATCC 33323]
 gi|116094789|gb|ABJ59941.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus gasseri ATCC 33323]
          Length = 501

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 12/228 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78
              S+L  IKK G L  G +                 + G D++  + ++  +      +
Sbjct: 39  AEGSVLKKIKKSGELVVGTSADYPPLEFTASENGKTKYVGVDIELAKDIAQDLGVK---L 95

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137
               ++     +AL++ ++D++      T  R+ S+  +            +  K     
Sbjct: 96  VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 155

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S+  L G +I  Q G+     +    K            ++  +  A ++ +  A   +
Sbjct: 156 TSIQSLKGQAIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 211

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +      N+     V      ++S  A AI +G  E    V+ T 
Sbjct: 212 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 258


>gi|320334229|ref|YP_004170940.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM
           21211]
 gi|319755518|gb|ADV67275.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus
           maricopensis DSM 21211]
          Length = 252

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 88/246 (35%), Gaps = 17/246 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F     L +L   + S  A  L  I+K G L+       V +   + NG ++GF+
Sbjct: 1   MKHLRF----ALPVLLLATSSALALPLTSIQKAGVLRLATAGDNVPYTS-EVNGKFEGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +++ +   P   Q+  ++       L   + D+   +   T  RE    + F  
Sbjct: 56  VDLANLIAAELGVKP---QWERVSRDRLLGGLADDRFDLAVSSLGITSTRE--NKVDFTQ 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      I      I   + L G ++ V AG+     L  Y +        +V+   +
Sbjct: 111 PMYCASVVIISR-DAAIQKHTDLEGKTVGVPAGS----LLQSYIQKLPFPKKTLVYGSGK 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EI  A  +   DA    +  L  L      P  +  +  ++   P   A+ + +T   + 
Sbjct: 166 EIVTAMLSGAIDA--APVYRLAGLAALKAYPKANFHVGPVLWSVPTGIALAEDNTALRDA 223

Query: 241 VSWTHY 246
           V+    
Sbjct: 224 VNVALT 229


>gi|115359642|ref|YP_776780.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115284930|gb|ABI90446.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 267

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 85/254 (33%), Gaps = 22/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + +  L      SF+         +    ++ GI+     F   + +G   GFD
Sbjct: 1   MNRTAKLVVSVLAFAPLVSFA---------QDTAMIRWGIDPTYPPFEAKQPDGSLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +K  ++         AL++++ D++      T  R     + F  
Sbjct: 52  IDLRDAICEQL---RAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +       + + + L+G  + +  GTT E      +         + ++  
Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++       R DA   D +      L   R   +      ++   +     A  + +GD
Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224

Query: 235 TEWYNIVSWTHYAM 248
            +    ++    A+
Sbjct: 225 ADMKKRLNDAIAAI 238


>gi|227891436|ref|ZP_04009241.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|227866583|gb|EEJ74004.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
          Length = 501

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 33/269 (12%)

Query: 1   MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42
           M   K   + +  L+++     +                T    L  +K++G L  G++ 
Sbjct: 3   MKIFKKILMLLAVLMMVVTPFAAITADTTSSSSSADTAKTTDDSLKKVKEKGTLVVGLSA 62

Query: 43  GLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
               +          ++ G D+   +  +  +      +    +N     +AL++ +ID 
Sbjct: 63  DYPPYEFTTKQDGKTEYVGIDIQIAKKFAKDLGVK---LVIKNMNFDSLLVALETGKIDT 119

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTE 157
           +    + T  R     + F  I Y  G+  +++K  K   +S     G ++  Q GT   
Sbjct: 120 IISAMNPTEERRK--SVDFSNIYYSGGKYIVINKKDKSKYTSKESFKGQTVGAQNGTLEY 177

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +   F             ++  +  A ++ +      +     A    N         
Sbjct: 178 NLIKQQFP----GATVKGLAKLNNLIIALQSGKVSGVLMEEPTAKAYVQNNPNLYAFNSK 233

Query: 218 PDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
             +       A A  +G T      + T 
Sbjct: 234 VSVDVNETGAAMAFPKGATALTQAANKTI 262


>gi|237729705|ref|ZP_04560186.1| predicted protein [Citrobacter sp. 30_2]
 gi|226908311|gb|EEH94229.1| predicted protein [Citrobacter sp. 30_2]
          Length = 350

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 95/260 (36%), Gaps = 11/260 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K        LI+      + +A     L  I  +  +  G       F+    N    G+
Sbjct: 49  KRMLTIFALLIVSATPCLAGSALPLHTLEQIASKKSITLGYQDDAFPFSWQNGN-VPAGY 107

Query: 60  DVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D C ++ SA+         K++++  N+  +F+ +++   DI+     ++  R     
Sbjct: 108 SIDICNSIVSALKTKLQLKNLKVEWVKANSASQFVLIKNHMADIMCIPAFYSKSRHSI-- 165

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    YF    F+M K +   ++++LSG S+ V++GT     L     A+++  +  +
Sbjct: 166 SEFSLPFYFSSTRFVMRKNESNDNLAELSGHSVLVKSGTIYVEQLQKVNAANDLDINIQL 225

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234
                      +     A       L  +      P ++ +    + +  P    +   D
Sbjct: 226 DTNNITAFNELKNGEYSALISSTVLLKGMIAQTPNPGDYKLSDIALSAPLPAGLLLPLHD 285

Query: 235 TEWYNIVSWTHYAMVTAEEL 254
            E+   V  T  +++ + E 
Sbjct: 286 KEFKEFVDGTLSSLMASNEF 305


>gi|148993850|ref|ZP_01823252.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|168489068|ref|ZP_02713267.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|147927675|gb|EDK78700.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|183572432|gb|EDT92960.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|332073579|gb|EGI84058.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|15901102|ref|NP_345706.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|111658436|ref|ZP_01409115.1| hypothetical protein SpneT_02000407 [Streptococcus pneumoniae
           TIGR4]
 gi|116516932|ref|YP_816569.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|149007101|ref|ZP_01830770.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|149012291|ref|ZP_01833360.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|168493162|ref|ZP_02717305.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|225856907|ref|YP_002738418.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|225859035|ref|YP_002740545.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|237649941|ref|ZP_04524193.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974]
 gi|307127172|ref|YP_003879203.1| amino acid ABC transporter amino acid-binding protein/permeae
           [Streptococcus pneumoniae 670-6B]
 gi|14972722|gb|AAK75346.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116077508|gb|ABJ55228.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|147761405|gb|EDK68371.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|147763617|gb|EDK70552.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|183576805|gb|EDT97333.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|225721475|gb|ACO17329.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|225725249|gb|ACO21101.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|306484234|gb|ADM91103.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 670-6B]
 gi|332074571|gb|EGI85045.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|332074851|gb|EGI85323.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|255323271|ref|ZP_05364406.1| L-cystine-binding protein TcyA [Campylobacter showae RM3277]
 gi|255299794|gb|EET79076.1| L-cystine-binding protein TcyA [Campylobacter showae RM3277]
          Length = 250

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 84/271 (30%), Gaps = 26/271 (9%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            + IL L      + +        IK+ G L          F+      + KG+DVD  R
Sbjct: 5   LLKILALSAFLTLNLNA-----KTIKE-GVLTIATEGTYAPFSYYDDKNELKGYDVDIAR 58

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     KI++L         A  + + D +      T  R+      +       
Sbjct: 59  EVAKKL---NLKIEFLTAPWDAMLAAFDAGKADAVFNQVSVTDERKK--KYDYAQPYTVV 113

Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               I HK    I S   + G      + T+    +A  + A N     +  +   +   
Sbjct: 114 HGAIITHKDNNDIKSFDDIKGKKNA-DSATSNWAKVAASYGAQN-----VTVDSFSKSME 167

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              + R D    D    Y             I  +       AP + +G+TE    +S  
Sbjct: 168 LLVSKRVDTVVRDNIVFYDFIKQRPGAPV-KIAAEGSDTDYTAPIVQKGNTELAEQISKA 226

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                  EEL   +  + ++S      DV R
Sbjct: 227 I------EELK-NEGKLAEISIRYFGKDVSR 250


>gi|283786455|ref|YP_003366320.1| putative periplasmic solute-binding protein of ABC transporter
           [Citrobacter rodentium ICC168]
 gi|282949909|emb|CBG89534.1| putative periplasmic solute-binding protein of ABC transporter
           [Citrobacter rodentium ICC168]
          Length = 255

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 81/250 (32%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+  +  +   ++ L   + +                 G       F    +    +GFD
Sbjct: 1   MFSKWMKAGCLMMALTGAAMAAQE----------TYVVGAGGTYRPFEFENSQKQLEGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +  +++ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 51  IDIIKAIAKA---ENFEVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFSH 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++     ++S+  L    + V   +T ++ ++     +        F+   
Sbjct: 106 PYFPAEQSIVVPAGSTVTSLDSLKNEKVGVVNSSTGDIVVSGVLGKN--STAIKRFDNTP 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+  +      +      ++      +     A+ +G+TE    
Sbjct: 164 LMLQELFEDGVSAAVGDVGVVKYYIRQHPEKQFKLVPDAKFERQYFGIAVAKGNTELLQK 223

Query: 241 VSWTHYAMVT 250
           ++     ++ 
Sbjct: 224 INAGLKKIIA 233


>gi|330830032|ref|YP_004392984.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Aeromonas veronii B565]
 gi|328805168|gb|AEB50367.1| ABC-type amino acid transporter, periplasmic amino acid-binding
           protein [Aeromonas veronii B565]
          Length = 273

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 15/233 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +  +     I++ G L+ G++T    +A     G   GF++D  R L++    +  ++
Sbjct: 25  AQTAPSDTQAQIEQSGTLRVGMST-FAPWAMRDKQGALIGFEIDVARRLATD---NGWQV 80

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKK 134
           +++P        +L +K+ D++      T  RE    + F       G        M K+
Sbjct: 81  EFVPTAWDGIIPSLLAKKYDVIIGGLTITPEREK--SVRFTQAYSHSGVQLAASSTMAKE 138

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           K   +     G  + V+ G +      ++F           F+   ++       R    
Sbjct: 139 KKTVADFNQRGVILAVRRGASPVQVAKEHFPKA----TLRQFDDESQVFQEVLNGRAHGA 194

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
                      L +      +   + +++     A+ +GD       +    A
Sbjct: 195 LSSSPKPEQEALRHPDAL-FMPFAEPLAQGDEGFALRKGDDALAEQFNEWIAA 246


>gi|261823416|ref|YP_003261522.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261607429|gb|ACX89915.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 269

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 89/266 (33%), Gaps = 23/266 (8%)

Query: 1   MYKDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M   FF+     +L   I    +   N +     +    L+ G        +    NG  
Sbjct: 1   MQTRFFIKPKTLLLAAGIAVVVAGCDNTTTTDQPQ---VLRIGTTGQSFPGSYK-ENGKL 56

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DV+    +++ +      +++   +       L++ ++D ++ N   T  R+     
Sbjct: 57  VGYDVEVAEKIANELGYK---VEWTTSDFSGLLGQLEAGKLDTIANNFVQTEARQK--KY 111

Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F           +   K   I S+S L G +I    G+T    L + F  +N+      
Sbjct: 112 NFSKDYLTYASQVVTSIKNDDIQSLSDLDGKTIAGVLGSTHVTNLRNAFPKNNI--TIRT 169

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTND-------RPSEHVILPDIISKSPLAP 228
           +E  +       ++R   Y      L A    +         P  H I+    +K+P   
Sbjct: 170 YETRDGAVNDVISNRVQGYVNSRPILLAEINKHKLPLKLVGEPLSHEIVSFPFAKNPKGD 229

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEEL 254
            ++    E  + +   H     AE+ 
Sbjct: 230 TLLAAFNEKLDTLRSNHQLNELAEKY 255


>gi|229492748|ref|ZP_04386549.1| ABC transporter, substrate-binding component [Rhodococcus
           erythropolis SK121]
 gi|229320407|gb|EEN86227.1| ABC transporter, substrate-binding component [Rhodococcus
           erythropolis SK121]
          Length = 284

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 14/210 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           ++++ G L+ G+N           NG   GFDVD   A+++ +  +     Y   +  + 
Sbjct: 40  NVRESGKLQVGVNIPYAPNEFKDENGKIVGFDVDIMNAVATVLGVEA---VYNQADFDKI 96

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             A+QS   D+   +   +  RE    + F        Q     +       +   G  +
Sbjct: 97  IPAIQSGSYDLGMSSFTDSKEREK--SVDFVTYYSAGIQ--WAQRPDNPVDPNNACGLRV 152

Query: 149 CVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            VQ  TT +             A       I ++  ++   A    R DA + D      
Sbjct: 153 AVQTTTTEDIDEVPAKSEACVAAGKPPIEKIKYDSQDDAANALILGRVDALSADSPVTGY 212

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
               +               +P    I++G
Sbjct: 213 AIKRSK--GRMEAAGQPFDSAPYGWPIVKG 240


>gi|239820510|ref|YP_002947695.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239805363|gb|ACS22429.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 261

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 14/222 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G  +         ++   + G  +G+DVD  RAL   +    +K + +  +       
Sbjct: 30  AEGSYRIATEGAYPPWSFKDSQGMLQGWDVDIARALCEKM---KAKCEIVAQDWDGIIPG 86

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150
           L +++ D++  +   T  R     +AF          F+  K      S + L G SI V
Sbjct: 87  LVARKYDMIVASMAITPQR--RERVAFSAKYKDTISRFVARKGMPPDVSPAALKGKSIGV 144

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q G+     LA  ++A N+K+    ++  +  +    A R +   G++   +   L    
Sbjct: 145 QRGSVQAAYLAQNYQAANLKF----YDTPQAAELDLVAGRVEYILGNMVTYHVGFLKTPE 200

Query: 211 PSEH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       L   I       A+ + D +    ++    A+
Sbjct: 201 AKDFAFVGPELKGGILGEGNGIAVRKDDGQTLARINAALEAI 242


>gi|123441653|ref|YP_001008374.1| histidine-binding periplasmic protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332162411|ref|YP_004298988.1| histidine-binding periplasmic protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|122088614|emb|CAL11409.1| histidine-binding periplasmic protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|318606496|emb|CBY27994.1| histidine ABC transporter, histidine-binding periplasmic protein
           precursor HisJ [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666641|gb|ADZ43285.1| histidine-binding periplasmic protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330863723|emb|CBX73824.1| histidine-binding periplasmic protein [Yersinia enterocolitica
           W22703]
          Length = 260

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G +     F    A+G+  GFD+D  + L + I    +K  ++  +      +L++K
Sbjct: 28  IKIGTDPTYAPFESKNASGELVGFDIDIAKELCNRI---DTKCTFVESDFDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+  +   F    Y      I  K   I  ++  L G  + V  G+
Sbjct: 85  KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIAPKDSKIEPTLVALKGKRVGVLQGS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E      ++   +    + ++  + I +   + R DA   D  A     L  +    +
Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYSDLSSGRIDAAFQDEVAGSEGFLKQEAGKGY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +             + + D E          A+  A          ++++K   
Sbjct: 201 AFAGPSVKNDEFFGVGTGMGLRKDDAELKA-------ALDKAFAEMRKDGTYDKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|298254350|ref|ZP_06977936.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19A]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|209547421|ref|YP_002279339.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538665|gb|ACI58599.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 275

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 9/246 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               IL  ++      +T A    ++ + G +  G       +    A+G + GFD++  
Sbjct: 14  LRAGILTCLLAMGAGSATAADNPYNLIEAGVISVGTMGDSKPYTFATADGQFTGFDIELF 73

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             + S +     K+ +          ++ +++ D+       T  R+ +  + F      
Sbjct: 74  LNVVSRLGFAKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARKKT--VDFSDGYLA 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                +     GI     L G  + V  GT  E+  A  F         + F       A
Sbjct: 132 GYLSVLT-ADAGIKDADGLKGKRLGVVQGTLQEVYAAKNFG----GTDLVKFPDNNSAVA 186

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A      DA+  D     A +     P+  V +      +P    I +G+  +   ++  
Sbjct: 187 ALNNGTVDAHFLDYE--AAKQYGERYPALKVAVNIPSFDAPAGFVIRKGNDAFRTALNGA 244

Query: 245 HYAMVT 250
            +  + 
Sbjct: 245 LHDAMQ 250


>gi|167765668|ref|ZP_02437721.1| hypothetical protein CLOSS21_00156 [Clostridium sp. SS2/1]
 gi|167712643|gb|EDS23222.1| hypothetical protein CLOSS21_00156 [Clostridium sp. SS2/1]
          Length = 312

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 27/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGF-----LKCGINTGL 44
           M K     ++  +I                 +  A ++   K  G      LK G++  +
Sbjct: 37  MKKILASLMMVGLIFCLGGCNVPWMKQKTEKTKAAKVIQADKVEGTMKGMKLKVGVSNDM 96

Query: 45  VGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F+   +      GFD+D    LS  +  +        +N K+    +++K++D+    
Sbjct: 97  APFSYYDSEQKKITGFDIDLLDKLSEYLGFEYELYP---MNMKKLEQKIKNKELDLAIAG 153

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+     +F    Y      ++ K   I+   +++   + V  GT++     DY
Sbjct: 154 ISITDERQR--EFSFTDTYYETYLQIVVRKDSQITDRKEITEKKVGVVEGTSSAQYAEDY 211

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
               N       ++ + ++         DA   D + +      +   +   +L + ++ 
Sbjct: 212 LSEDN---KITYYKNITKVWNDLEKGTIDATIYDTTGIQNYMQEHADNTNLSVLNEQLNS 268

Query: 224 SP--LAPAIIQG 233
                    ++G
Sbjct: 269 EESNYGIMFVKG 280


>gi|291559904|emb|CBL38704.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2]
          Length = 276

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 27/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGF-----LKCGINTGL 44
           M K     ++  +I                 +  A ++   K  G      LK G++  +
Sbjct: 1   MKKILASLMMVGLIFCLGGCNVPWMKQKTEKTKAAKVIQADKVEGTMKGMKLKVGVSNDM 60

Query: 45  VGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F+   +      GFD+D    LS  +  +        +N K+    +++K++D+    
Sbjct: 61  APFSYYDSEQKKITGFDIDLLDKLSEYLGFEYELYP---MNMKKLEQKIKNKELDLAIAG 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+     +F    Y      ++ K   I+   +++   + V  GT++     DY
Sbjct: 118 ISITDERQR--EFSFTDTYYETYLQIVVRKDSQITDRKEITEKKVGVVEGTSSAQYAEDY 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
               N       ++ + ++         DA   D + +      +   +   +L + ++ 
Sbjct: 176 LSEDN---KITYYKNITKVWNDLEKGTIDATIYDTTGIQNYMQEHADNTNLSVLNEQLNS 232

Query: 224 SP--LAPAIIQG 233
                    ++G
Sbjct: 233 EESNYGIMFVKG 244


>gi|187478452|ref|YP_786476.1| glutamine ABC transporter periplasmic protein [Bordetella avium
           197N]
 gi|115423038|emb|CAJ49569.1| glutamine ABC transporter, glutamine-binding protein [Bordetella
           avium 197N]
          Length = 248

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 20/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       +           + +   L    +T  V F   + N  + GFD
Sbjct: 1   MIKTKVAAVLIGFSTAMSGSMA-------VAQDKELIVATDTAFVPFEFKQGN-TYTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K +  P++       LQ+K ID            +    + F  
Sbjct: 53  IDLWSAIAKEL---KLKYKLQPMDFNGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 107

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I +   LSG ++ V+ GT T     DY K+        +F  +
Sbjct: 108 PYYESGLAILVADNNNSIKNAKDLSGKTVAVKTGTATV----DYLKSQVPDAKLKLFPNI 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T  +     ++  + S      A  +G      
Sbjct: 164 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGTVKSGDYYGIAFPKGSP-MVA 221

Query: 240 IVSWTHYAMVTAEELG 255
            V+     +    E  
Sbjct: 222 EVNKALATLKANGEYE 237


>gi|148989263|ref|ZP_01820643.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|147925241|gb|EDK76320.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|169834415|ref|YP_001694671.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|168996917|gb|ACA37529.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452


>gi|148985136|ref|ZP_01818375.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|148998673|ref|ZP_01826112.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|149019232|ref|ZP_01834594.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|168486561|ref|ZP_02711069.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|168575696|ref|ZP_02721611.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|221231935|ref|YP_002511087.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854706|ref|YP_002736218.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|225860926|ref|YP_002742435.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229894|ref|ZP_06963575.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298502762|ref|YP_003724702.1| amino acid ABC superfamily transporter ATP-binding protein/permease
           [Streptococcus pneumoniae TCH8431/19A]
 gi|307067889|ref|YP_003876855.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|147755510|gb|EDK62558.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|147922581|gb|EDK73699.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|147931102|gb|EDK82081.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|183570457|gb|EDT90985.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|183578152|gb|EDT98680.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|220674395|emb|CAR68945.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225723631|gb|ACO19484.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|225727804|gb|ACO23655.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238357|gb|ADI69488.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|301794323|emb|CBW36748.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           INV104]
 gi|301800161|emb|CBW32766.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           OXC141]
 gi|306409426|gb|ADM84853.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|327389476|gb|EGE87821.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 721

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|186474515|ref|YP_001863486.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184198474|gb|ACC76436.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 255

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++     ++  ++F+T+            L+ GI      F     +G+  GFD+D   
Sbjct: 4   LMTAAAFCVMASSAFATD-----------TLRFGIEADYPPFEYKLPSGELTGFDIDIGN 52

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+ + +     K +++  +      AL +K+ D ++     T  RE    + F  + Y  
Sbjct: 53  AVCARM---QVKCKWVENSFDGLIPALMAKKFDAINSGMWDTPQRE--QVIDFTSVIYAT 107

Query: 126 GQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               +      I  +   L G  + VQ G   ++     +         I +     + +
Sbjct: 108 PMRLVARTDSHILPNAESLKGKRVGVQQGGAQQIYAEQKWAPAG--AVIITYPSQSALFS 165

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYN 239
                R DA  G         L          +   +    +     A  + + D E   
Sbjct: 166 DLAGGRIDAALGAQQNAEDGFLKTPEGKGFAFVGPGLLDEKISGRGVAFGVRKQDKELRT 225

Query: 240 IVSWTH 245
            ++   
Sbjct: 226 RLNEAI 231


>gi|75910090|ref|YP_324386.1| amino acid ABC transporter permease [Anabaena variabilis ATCC
           29413]
 gi|75703815|gb|ABA23491.1| L-arginine ABC transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-arginine-binding
           protein / L-histidine-binding protein / L-histidine ABC
           transporter membrane protein / L-lysine-binding protein
           / L-lysine ABC transporter membrane protein /
           L-glutamine-binding protein [Anabaena variabilis ATCC
           29413]
          Length = 501

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 72/247 (29%), Gaps = 16/247 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     ++ L     +  +  L    +   L+         F      G+ +GF 
Sbjct: 1   MSKRVFGRWCLVLSLICLLLTGCSGNLS---QEKTLRIATEPAFPPFEFTGQGGNLQGFS 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++SA      ++ +  L       ALQS+ +D    +   T  R  ++   F  
Sbjct: 58  IDLMNAIASAA---NLRVSFQSLPFDGIIPALQSRTVDAAISSITITAERAKTVA--FSR 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    +       +    L    I VQ GTT          A         F+  
Sbjct: 113 PYFKAGLAIAIRSSDEDITGFDSLKNKKIAVQIGTTGAEKAKSIPGA-----QIRSFDSA 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                       DA   D        +         ++  ++++     A  Q    +  
Sbjct: 168 PLALQELLNSNVDAVINDAPVTL-YAINTGNLQGIKVVEKLLTEEYYGIATAQNSP-YLA 225

Query: 240 IVSWTHY 246
           +++    
Sbjct: 226 LINDGLN 232


>gi|172057734|ref|YP_001814194.1| extracellular solute-binding protein [Exiguobacterium sibiricum
           255-15]
 gi|171990255|gb|ACB61177.1| extracellular solute-binding protein family 3 [Exiguobacterium
           sibiricum 255-15]
          Length = 280

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 81/283 (28%), Gaps = 13/283 (4%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAEVKAN-G 54
           M     +   ++    L  ++       +     IKK G L       L   +  +    
Sbjct: 1   MKNSVKWTGLLIAGTALVLSACGQEEKQMTAYDKIKKEGTLTVATAGTLYPTSFHEEKSN 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFDV+  + ++  +     K+ +  ++      ++ + Q+D+ + +   T  R+   
Sbjct: 61  KLTGFDVEVVKEIAKRL---DLKVAFKEMSFDGMLTSVNTGQVDLAANDITITEERKGKF 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +      +           GI S+  L G     +A TT         K +  K    
Sbjct: 118 AFSKPYKYTYGTAIVRKSDLSGIKSLEDLKGKKAAGEATTTYMQV----AKKYGAKEVTY 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                ++        R D    D                 +      + S +   +   +
Sbjct: 174 DNATNDQYLRDVSNGRTDVILNDYYLQSLAVDFFKDFDITIHPDIAYNPSQVGLIMDLDN 233

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
            E  + ++     M     L    K        +  PDV+  L
Sbjct: 234 KELQSNINAEIDEMKEDGTLAKLSKTFYANKDVSKMPDVKTTL 276


>gi|317012749|gb|ADU83357.1| putative polar amino acid transport system substrate-binding
           protein [Helicobacter pylori Lithuania75]
          Length = 258

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 75/251 (29%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVSFLFLLVIS--FFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 229 LINQAMQRLIN 239


>gi|290967793|ref|ZP_06559346.1| putative glutamine ABC transporter periplasmic protein [Megasphaera
           genomosp. type_1 str. 28L]
 gi|290782152|gb|EFD94727.1| putative glutamine ABC transporter periplasmic protein [Megasphaera
           genomosp. type_1 str. 28L]
          Length = 274

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 14/248 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANG--DWK 57
           M      S+L + +L     S         K     L+   N   V F         ++K
Sbjct: 1   MNLKKATSLLAITLLSVGVLSGCGHTPQAQKDTTKPLQVCTNATFVPFEFKDDANATEYK 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF++D  +A+S  +      +    +       ALQ   +D+ +     TL  E +  +A
Sbjct: 61  GFEMDLLQAVSKEMG---QPVALNNVPFAGIIPALQQGTMDLGASG--ITLSPERAEKVA 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y      ++     I S+  L   ++ VQ GTT     ADY  +  +      F+
Sbjct: 116 FSAPFYESKLVLMVPASGSIHSIQDLKNKTVAVQMGTTA----ADYCDSKKLATK--QFD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E+    +     A   D            +    +I         LA A+ + + + 
Sbjct: 170 HNSEVIMELQVGGSPAGILDKPVADYYLTKEGKGKFKIIDLPDAKGEYLAFAMNKNNPQL 229

Query: 238 YNIVSWTH 245
              +    
Sbjct: 230 QKDIDAAL 237


>gi|288959825|ref|YP_003450165.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288912133|dbj|BAI73621.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 277

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 70/199 (35%), Gaps = 13/199 (6%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  IK+RG L  G+      F  + A   + KGF++D    L+  +      +    + 
Sbjct: 30  TLDRIKQRGSLVAGVILSGAPFGYIDAKSQEQKGFNIDLATELARGLGVKLETVT---VT 86

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQL 143
              R   LQ  ++D+L  N  WT  R     L F P  +    G  +  K   +     L
Sbjct: 87  PPNRVQFLQQGKVDLLIANMSWTEERAEM--LDFVPTAFERSGGIALGRKGTPVKDWPDL 144

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT-GDISALY 202
            G ++C+  G      LA+   A         F    +   A +  +CDA      +   
Sbjct: 145 KGKTVCLSQGANFTKPLAEEIGAK-----IKGFPSQPDSLLALKGGQCDAAVHTGATLRV 199

Query: 203 ALKLTNDRPSEHVILPDII 221
            L    +   ++ IL    
Sbjct: 200 MLLDHPEDWKDYEILTPTD 218


>gi|288905601|ref|YP_003430823.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus UCN34]
 gi|288732327|emb|CBI13897.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Streptococcus gallolyticus UCN34]
          Length = 741

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 81/242 (33%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +   +++    F     +G+++G DV+  +A++     +
Sbjct: 269 LTLTGDASAKATP--VKSTYKIV--MDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN 324

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++           A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 325 ---VEISNPGFDAALNAVQAGQADAVMAGMSITDARKEI--FDFSDAYYTSNILLAVKSG 379

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I S S L G ++  + GT++   L+++   +        F+    +  +  +   DA 
Sbjct: 380 SSIKSYSDLKGLTVGAKNGTSSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDAL 437

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEE 253
             D      L     +  +               A+ +  + E   + +    A+V + E
Sbjct: 438 MDDE---AVLLYAIQQGRDFETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGE 494

Query: 254 LG 255
             
Sbjct: 495 YD 496



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 67/211 (31%), Gaps = 18/211 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       +L +  +FF       A           +    +T    F    ++  +KG 
Sbjct: 1   MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++     D ++             A+Q+ Q D L   T  T  R+      F 
Sbjct: 52  DVDIIKEVAEREGWDYNQ---TYPGFDAAVNAVQAGQADALMAGTTVTDARKKV--FTFS 106

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y              IS  SQL G ++ V+ GT  +  L ++   +        F+ 
Sbjct: 107 DTYYDTSIVIYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEHADKYGY--TVKTFDT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + ++ +  +   DA   D   +        
Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAINQGK 195


>gi|259502414|ref|ZP_05745316.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259169557|gb|EEW54052.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 497

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 85/244 (34%), Gaps = 14/244 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANG--DWKGFDVDFC 64
           S L       +  +     +  IKKRG L  G       +   VK +G     G D+D  
Sbjct: 22  SALAATPETNSGNADQVESIAAIKKRGKLVIGTAADYPPYEFSVKEHGVNKRVGIDIDLG 81

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +        +  +N     +AL++ ++D++      T  R     + F  + Y 
Sbjct: 82  KQIAKDLGVKAE---FKVMNFDSLLVALETHKVDMVIAAMSPTPERAK--SVDFSKVYYG 136

Query: 125 DGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           D Q  +++K        +S   G  I  Q G+       D  K           +RV  +
Sbjct: 137 DSQYIVINKSDKAKYKHLSDFKGHVIGAQNGSEQY----DIAKQQVKGAKLKGLDRVNNL 192

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A ++H+ D    D +   A    N + +       I  +   A A+ +   E    V+
Sbjct: 193 IIALQSHKVDGVVMDSTRAKAFVANNAKLTTLDPHFKISGQQGTAVAVAKNSPELVAAVN 252

Query: 243 WTHY 246
            T  
Sbjct: 253 KTIT 256


>gi|220907549|ref|YP_002482860.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219864160|gb|ACL44499.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 302

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 95/250 (38%), Gaps = 12/250 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           MYK   +++L L+     + + +A   +  + + G +  G    ++ F+ +    +  G+
Sbjct: 1   MYKQRAIALLGLLATLGFATAASAETVIEKVTRTGVITMGGRVDIIPFSYLNDKKELVGY 60

Query: 60  DVDFCRALSSAI---FDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             D    +++ +      P  IQ+  + N  E    +++ QID+   NT +T  R  S+ 
Sbjct: 61  SQDVADLIAAEVSAYVGKPVAIQFQQVNNFSELLPKVENGQIDLAC-NTQFTWGR--SMF 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + +       G   ++ K     +   L G  + V   +  E  +    K    +   + 
Sbjct: 118 VDYSVPYSLSGIRLLVKKGAIKGTPESLVGKRVGVLPNSLGEAMI----KVVQPQAVLVP 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              ++E      A + DA  GD + L            H+      ++  +   +   ++
Sbjct: 174 ITGIDEGIDDLIAGKVDAIAGDSNILAGNIQRVSGSDYHLAPDQPFARYAVGCIVPPDNS 233

Query: 236 EWYNIVSWTH 245
           ++ ++V+   
Sbjct: 234 KFRSLVNIAI 243


>gi|323439640|gb|EGA97359.1| extracellular amino acid binding ABC transporter [Staphylococcus
           aureus O11]
          Length = 252

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 59/204 (28%), Gaps = 10/204 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++  + +     + ++      K    +  G       F+    +G   G+D+D  +A++
Sbjct: 1   MIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                +  K+++   +    F  L + + D+++        RE      F     F    
Sbjct: 61  KE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSKPYTFSSAV 115

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++ + +               Q  T+    LA    A          +   +      +
Sbjct: 116 LVIRENEKDIKDFDGVKGKKLAQTFTSNYGKLAKDKGA-----DITKVDGFNQSMDLLLS 170

Query: 189 HRCDAYTGDISALYALKLTNDRPS 212
            R D    D  +    K       
Sbjct: 171 KRVDGTFNDSLSYLDYKKQKPNAK 194


>gi|302344037|ref|YP_003808566.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
 gi|301640650|gb|ADK85972.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
          Length = 269

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 79/247 (31%), Gaps = 14/247 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
              +    ++  I   G L  G +           NG   GFD+D    L+ A+      
Sbjct: 20  CPAAQAGPVIERIVANGTLTVGTSPSFPPLTAKAKNGMLMGFDIDMANILAGAMGVK--- 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           ++++ L   E   AL   ++D++         R  +L   F       GQ  +       
Sbjct: 77  LRFVTLPFPELLEALNQDKVDVVISGMTVLPKR--NLRAVFVGPYLVGGQTVLGDNALMA 134

Query: 137 -ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            I+    L+ A   V A   TT++                ++ E   E      A   + 
Sbjct: 135 AINGRQDLNDAKYKVAAAKGTTSQEAARQMLPKA----QLVIAENEGECLKLLLAKEVNM 190

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              D +        +       ++    +  PL  AI  GD ++ N+++        + +
Sbjct: 191 VMADYTFCAMAAFKHK-AQNLAVIGKPFTFEPLGMAIKDGDPQFQNLLANFLVTFQGSGQ 249

Query: 254 LGITQKN 260
             + Q+ 
Sbjct: 250 SELLQRR 256


>gi|209547508|ref|YP_002279426.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538752|gb|ACI58686.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 277

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 75/241 (31%), Gaps = 21/241 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +   ++L  +     LK   +      + +    +  GFD+D  + +   +      +++
Sbjct: 23  ANAGAVLDRVLAAKDLKVATDANWAPQSFMNDKNELDGFDIDVAKDIGRRLGVK---VEF 79

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +            + + D+   +   T  R       F  + Y+       HK    + +
Sbjct: 80  VTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEI--FDFPAVYYYTPAAVAAHKDSKATKL 137

Query: 141 SQLSGASICVQAGTTTELTL-------ADYFKAHNMKYHPIVFERVE---EIDAAYRAH- 189
           + L G  +   A +T E          A    A   ++ P   +            R   
Sbjct: 138 ADLDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEFKPKEVKSYANSTTAFDDLRLGD 197

Query: 190 --RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
             R DA    +    ++            + D +   PLA AI  GD E+ + ++     
Sbjct: 198 GTRLDAVVSSLP---SILDAVKAGYPIKQIGDPVFYEPLAVAIEHGDQEFNDKIAEAVTG 254

Query: 248 M 248
           M
Sbjct: 255 M 255


>gi|33152998|ref|NP_874351.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Haemophilus ducreyi 35000HP]
 gi|33149223|gb|AAP96740.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Haemophilus ducreyi 35000HP]
          Length = 260

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 79/250 (31%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    + L  I LF +  S  +  +L  I  +G +          F      G   G+
Sbjct: 1   MLKKIAFATLTAISLFTSMNSLASNDLLSRIDAKGTISVATEGTYPPFTYHDQTGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L++ + D+++     +   E        
Sbjct: 61  DVEVTRAIAEKLGVK---VDFKETQWDAMLAGLKAGRFDLVANQVALS-TPERQAMFDLS 116

Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   ++      +   + + G  +  Q+ ++    L     A       I  + 
Sbjct: 117 DAYSWSGAALVVRADNRHVKQPADVQGIKVA-QSLSSNYGEL-----AVKNGAKVISVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +     +  R +A   +  AL      N   S  +I  D          + +G+    
Sbjct: 171 MAQALLLIQQQRVEATFNNYLALLDYFNKNPTSSLKIIWQDSEQLGA-GLVVNKGNQAAL 229

Query: 239 NIVSWTHYAM 248
             ++    A+
Sbjct: 230 AKINQAIMAL 239


>gi|197295013|ref|YP_002153554.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|195944492|emb|CAR57094.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 260

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G  KGFD+D   AL + +    +K  ++  +      
Sbjct: 23  KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            LQ+++ D++  +   T  R     + F    Y +    I     G +   ++L+G  + 
Sbjct: 80  GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E    + + A       + +   ++  A     R D    D        L   
Sbjct: 138 VEQGTVQETYAREKWAAAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           R         ++  + +     A  + + DT+  + ++   
Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKADTDLRDALNRAI 236


>gi|126433388|ref|YP_001069079.1| protein kinase [Mycobacterium sp. JLS]
 gi|126233188|gb|ABN96588.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Mycobacterium sp. JLS]
          Length = 604

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 75/244 (30%), Gaps = 14/244 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
               S  A++  D+++ G L  G+N          A GD  GFDVD  +A++  +   P 
Sbjct: 347 GAVPSIAATVPADVRESGRLVIGVNVPYAPNEFRDAYGDIVGFDVDLMKAVARTLGLVPE 406

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
              +     +    ++QS    +   +   TL RE    + F       G  +       
Sbjct: 407 ---FRETAFESVIPSVQSGAFTLGMSSITDTLEREK--AVDFV-TYLEAGTLWAQRAGSE 460

Query: 137 ISSVSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           +   S   G  + V      E             A       +VF   +++ AA  A   
Sbjct: 461 VVDPSNACGLRVGVAYSVIQETDELPAKSEACVAAGREPIRKVVFTEQDDVTAALLAGEV 520

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DA + D                     ++   +P    + +G +     +      ++  
Sbjct: 521 DAMSADSP--VTGFAIKTSGGALEPAGEVFDSAPYGWPVAKG-SALAESLRQALEHVMAT 577

Query: 252 EELG 255
            E  
Sbjct: 578 GEYR 581


>gi|46579649|ref|YP_010457.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120602868|ref|YP_967268.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|46449064|gb|AAS95716.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563097|gb|ABM28841.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311233447|gb|ADP86301.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 246

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 68/217 (31%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +    +        V AN    G  VD+  A++        K+ +  +     F  L +
Sbjct: 24  TVVFAHDATWPPMEFVDANKQIVGLAVDYVDAIAKEAG---FKVVHKNVAWDGIFAGLAA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D ++ +   T  R+    + F    +   Q  ++ K     ++  + G ++  Q  T
Sbjct: 81  GKYDAIASSVTITEERKK--AMDFTMPYFDVKQALVVPKTTEAKTLEDMKGKTLGAQIST 138

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND---RP 211
           T    +               ++ +          R D    D        L  +   + 
Sbjct: 139 TGHFAIKRTA-----GVTAKSYDEIGLAMEDLFNGRIDGVVCDDPVAANYALQQEEYAKK 193

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +   + D         A+ QG+ E  ++++    A+
Sbjct: 194 LKIAFIVDTPESEYYGIAVKQGNKELVDLINKGIEAV 230


>gi|94987175|ref|YP_595108.1| amino acid ABC transporter periplasmic protein [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731424|emb|CAJ54787.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 265

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 7/243 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +  ++  +  + +    ++  + KRG L+ G     + +     +G++ GFD
Sbjct: 1   MKKLLIVLLAIIVCSYSYTHAKMEPLIEGVIKRGVLRVGFAP-FLPWIIQNKDGEYVGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L+  +      +Q +P    E   +L + + DI+      TL R  +L + F  
Sbjct: 60  IDIAKRLAQDLG---VTLQLVPTRWTEIIPSLLANKFDIIISGATITLER--NLQVNFSN 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      + + KK              V        T+    K    K    +F+   
Sbjct: 115 PYHQTDIEVLANAKKVKGMKFPQDFNKPEVIVAIRNGSTVITPAKQLLPKASFRLFDDEV 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  + +                 N   +   +    I+   +  AI +GD +  NI
Sbjct: 175 ASIKDVESGQSHILLASAPLPAIQ-AINSNGNLIRLDTLPITHQSVGFAIKKGDPDSLNI 233

Query: 241 VSW 243
           ++ 
Sbjct: 234 LNN 236


>gi|170724279|ref|YP_001751967.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169762282|gb|ACA75598.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 273

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 82/260 (31%), Gaps = 23/260 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +    L+    TS +   + L  ++ R  +   +      F+ +       GFDVD  +A
Sbjct: 6   LLCAGLLAFSATSAAFAGATLDRVESRKEVVNVLMESYPPFSFLNEQNQLDGFDVDVAKA 65

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +++ +      ++    +         S + D+   +   +  R       F    Y   
Sbjct: 66  VAAKLGVK---LRLETPSWDVIAAGRWSGRYDLCICSMTPSKARAEV--FDFPVEYYASP 120

Query: 127 QGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------V 175
               +  K + I +   L G  + + + ++ E  L         +   I           
Sbjct: 121 AVIVVNAKDERIHAAKDLDGLKVGLTSASSYESYLNKNLVIEGAEDQKIEYPFDFVQIAP 180

Query: 176 FERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           ++               R DA   ++         + R     +    + + P + AI +
Sbjct: 181 YDTDNVAFQDLGLGAGVRLDAILTNLVTAQPRLAQDKR---FKLAGAPLYEEPNSVAIEK 237

Query: 233 GDTEWYNIVSWTHYAMVTAE 252
           GD EW   +    +A + A+
Sbjct: 238 GDPEWDAKLRQV-FAELKAD 256


>gi|170735047|ref|YP_001774161.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169821085|gb|ACA95666.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 260

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G  KGFD+D   AL + +    +K  ++  +      
Sbjct: 23  KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---KAKCVWVSSSFDGLIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            LQ+++ D++  +   T  R     + F    Y +    I     G +   ++L+G  + 
Sbjct: 80  GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E    + +         + +   ++  A     R D    D        L   
Sbjct: 138 VEQGTVQETYAREKWAPAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           R         ++  + +     A  + + DT+  + ++   
Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKTDTDLRDALNRAI 236


>gi|120403816|ref|YP_953645.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119956634|gb|ABM13639.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 306

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 75/245 (30%), Gaps = 16/245 (6%)

Query: 22  TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
             A+ +   IK  G L  G+N           +G   GFDVD   A++  +   P    Y
Sbjct: 54  AIANTVPEAIKSTGKLIVGVNIPYAPNEFKDESGKIVGFDVDLMNAIAGTLGLTPE---Y 110

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
              +  +   ++Q    ++   +   +  RE    + F    +  G  +       I   
Sbjct: 111 READFAKIIPSIQGGTFNVGMSSFTDSKERE--QQVDFV-TYFSAGTLWAQPAGGQI-DP 166

Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
               G  + VQA T  E             A       I F+  +    A    + DA +
Sbjct: 167 ENACGKKVAVQATTVQETDELPARSKKCTDAGQPAIEIIAFDSQDAATNAVVLGQADAMS 226

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D      L        + V   ++   +P    + +G     +++      ++   +  
Sbjct: 227 ADSP--VTLYAIKQTNGKLVQAGEVFDSAPYGWPVEKGSPLAQSLL-QALEHLIETGKYK 283

Query: 256 ITQKN 260
               N
Sbjct: 284 EIAAN 288


>gi|25029144|ref|NP_739198.1| putative amino acid ABC transporter glutamin-binding protein
           [Corynebacterium efficiens YS-314]
 gi|23494431|dbj|BAC19398.1| putative amino acid ABC transporter glutamin-binding protein
           [Corynebacterium efficiens YS-314]
          Length = 368

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 12/219 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +I +RG L  G++      +     +G  +GF+V   + ++  IF +P  + +  + A +
Sbjct: 106 EIFQRGRLIVGVDQSKNLLSFRDPVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAGD 165

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               L    +D++ R+   T  R   +   F           ++    GI  +  L+G +
Sbjct: 166 SLRGLSRGDVDMVIRSVSVTEDRLRRM--EFSTPYMRTQTRLLVMDNSGIQGIEDLAGNT 223

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CV  G+T                  +      +   A +  +  A  GD + L  +   
Sbjct: 224 VCVADGSTALQKTRAMAPE----SSILRTRNWSDCLMALQQQQAQAILGDDAVLAGIAAQ 279

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWT 244
           +       ILP I++    A AI       +   +V   
Sbjct: 280 DP---YTRILPSILAWESYAVAIAPSRASRDTTGLVRQV 315


>gi|298736104|ref|YP_003728629.1| putative polar amino acid transport system substrate-binding
           protein [Helicobacter pylori B8]
 gi|298355293|emb|CBI66165.1| putative polar amino acid transport system substrate-binding
           protein [Helicobacter pylori B8]
          Length = 256

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L+I FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFL----LVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 57  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 112

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 113 PYSYSGTIMLVRKDENRIKDIKDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 167 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 226

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 227 LINQAMQRLIN 237


>gi|259908982|ref|YP_002649338.1| glutamine ABC transporter periplasmic protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224964604|emb|CAX56117.1| Glutamine high-affinity transporter [Erwinia pyrifoliae Ep1/96]
          Length = 248

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 12/216 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   +  G++ GFD+D   A++  +  +       P++      A
Sbjct: 23  AEKKLVVATDTAFVPFEFKQG-GNYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICV 150
           LQ++ ID+       T  R+    +AF    Y  G    +      +  +  L+G  + V
Sbjct: 79  LQTRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVNANNDSVKGIDDLNGKVVAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +      + K          F  ++        +R DA   D   +     T  +
Sbjct: 137 KSGTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGK 192

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   + D I       A  +G  +    V+    
Sbjct: 193 G-QFKAVGDSIEAQQYGIAFPKGSDDLREKVNGALK 227


>gi|301301393|ref|ZP_07207533.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300850998|gb|EFK78742.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 499

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 33/269 (12%)

Query: 1   MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42
           M   K   + +  L+++     +                T    L  +K++G L  G++ 
Sbjct: 1   MKIFKKILMLLAVLMMVVTPFAAITADTTSSSSSADTAKTTDDSLKKVKEKGTLVVGLSA 60

Query: 43  GLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
               +          ++ G D+   +  +  +      +    +N     +AL++ +ID 
Sbjct: 61  DYPPYEFTTKQDGKTEYVGIDIQIAKKFAKDLGVK---LVIKNMNFDSLLVALETGKIDT 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTE 157
           +    + T  R     + F  I Y  G+  +++K  K   +S     G ++  Q GT   
Sbjct: 118 IISAMNPTEERRK--SVDFSNIYYSGGKYIVINKKDKSKYTSKESFKGQTVGAQNGTLEY 175

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +   F             ++  +  A ++ +      +     A    N         
Sbjct: 176 NLIKQQFP----GATVKGLAKLNNLIIALQSGKVSGVLMEEPTAKAYVQNNPNLYTFNSK 231

Query: 218 PDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
             +       A A  +G T      + T 
Sbjct: 232 VSVDVNETGAAMAFPKGATALTQAANKTI 260


>gi|16119461|ref|NP_396167.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15161999|gb|AAK90608.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 259

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 11/222 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L D+   G L+ G+      +    A G   G DV+  R ++  +  +   ++ +PL 
Sbjct: 24  DTLADVTSNGKLRVGVLLDAAPWGYKDAEGKDTGLDVELARIMAKDLNAE---LEIVPLT 80

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R  +L + ++D+L      T  R  +  + F         G      + I  VS L+
Sbjct: 81  GASRIPSLLADKVDVLIAAAGATPER--AQQVMFSQPYAAVSLGVFGGDGEKIDDVSGLA 138

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I V  G+T +  L D           + FE      AA+ A + D +  + +   A+
Sbjct: 139 GKQIAVAKGSTLDTWLTDNAPE----VKLVRFEDTPSAIAAFLAGQADYFAENSAI--AV 192

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           K+ +D P ++V +   I  SP    + QG+  + N ++   +
Sbjct: 193 KVADDNPGKNVAIVYRIRLSPAHVGVKQGEQNFLNWINTFLF 234


>gi|22126707|ref|NP_670130.1| arginine 3rd transport system periplasmic binding protein [Yersinia
           pestis KIM 10]
 gi|45441072|ref|NP_992611.1| arginine-binding periplasmic protein 1 [Yersinia pestis biovar
           Microtus str. 91001]
 gi|21959726|gb|AAM86381.1|AE013886_6 arginine 3rd transport system periplasmic binding protein [Yersinia
           pestis KIM 10]
 gi|45435931|gb|AAS61488.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 251

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 12/214 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +  D     +          +L+ 
Sbjct: 30  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEMQAD---CTFTNQAFDSLIPSLKF 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 87  KRFDAVISGMDITPERQKQVA--FTQPYYDNSALFIAQK-DKVADLAALKGKRVGMQNGS 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L       + +   + ++  +      +  R DA  GD + +      ND+    
Sbjct: 144 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQNDQLAAV 199

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +       + L  A+ Q +TE    +     
Sbjct: 200 GDKVTDADYFGTGLGIAVRQSNTELQGKLDAALT 233


>gi|108797761|ref|YP_637958.1| serine/threonine protein kinase [Mycobacterium sp. MCS]
 gi|119866851|ref|YP_936803.1| protein kinase [Mycobacterium sp. KMS]
 gi|108768180|gb|ABG06902.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Mycobacterium sp. MCS]
 gi|119692940|gb|ABL90013.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Mycobacterium sp. KMS]
          Length = 604

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 75/244 (30%), Gaps = 14/244 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
               S  A++  D+++ G L  G+N          A GD  GFDVD  +A++  +   P 
Sbjct: 347 GAVPSIAATVPADVRESGRLVIGVNVPYAPNEFRDAYGDIVGFDVDLMKAVARTLGLVPE 406

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
              +     +    ++QS    +   +   TL RE    + F       G  +       
Sbjct: 407 ---FRETAFESVIPSVQSGAFTLGMSSITDTLEREK--AVDFV-TYLEAGTLWAQRAGSE 460

Query: 137 ISSVSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           +   S   G  + V      E             A       +VF   +++ AA  A   
Sbjct: 461 VVDPSNACGLRVGVAYSVIQETDELPAKSEACVAAGREPIRKVVFTEQDDVTAALLAGEV 520

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DA + D                     ++   +P    + +G +     +      ++  
Sbjct: 521 DAMSADSP--VTGFAIKTSGGALEPAGEVFDSAPYGWPVAKG-SALAESLRQALEHVMAT 577

Query: 252 EELG 255
            E  
Sbjct: 578 GEYR 581


>gi|313890948|ref|ZP_07824570.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313120672|gb|EFR43789.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 724

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       IL ++ L F            I     +    +T    F    ++  +KG D
Sbjct: 1   MKNKIKGVILAILALSFIFSG--------IANAETVTIVSDTAYAPFEYKDSDQIYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++     D    +           A+QS Q   L   T  T  R+      F  
Sbjct: 53  VDIIKEVAKRQKWDY---KMTYPGFDAAVNAVQSGQAKALMAGTTITKERQKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K K +   S+L+G ++ V+ GT ++  L      +        F+  +
Sbjct: 108 PYYDTKIVIATQKAKPVKKYSELNGKTVGVKNGTASQSFLDKNKDTYGFS--VKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  +   DA   D   +      N  
Sbjct: 166 LMYNSLASGSIDAVMDDEPVIQFAIKQNQD 195



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 74/242 (30%), Gaps = 11/242 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           ++   K   ++    F      G + G D++  +A++         I+           A
Sbjct: 267 EKKSYKIVADSSFAPFEFQNDKGQYVGIDMELIKAIAKE---QGFTIEIANPGFDAALNA 323

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS Q D +      T  R+      F    Y       +     I S   L   ++  +
Sbjct: 324 VQSGQADGVIAGMSITDERK--QIFDFSDSYYTSNILLGVKSGSSIKSYEDLKDKTVGAK 381

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +   L    + +  K     F+    +  +  A    A   D      LK +  + 
Sbjct: 382 KGTASYDFLDKNKEKYGYK--IKAFDEASSMYDSLNAGSIVALMDDE---AILKYSIQQG 436

Query: 212 SEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
            +     +         A+ +  + E  ++ +    ++  + +      N     +D+  
Sbjct: 437 RKFDTPIEGEPSGEYGFAVKKGTNPELIDMFNNGLASLKESGKYKSIINNYLASDQDSKG 496

Query: 271 PD 272
            +
Sbjct: 497 KE 498


>gi|260461092|ref|ZP_05809341.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259033126|gb|EEW34388.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 269

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 83/253 (32%), Gaps = 11/253 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V +L    +   + + NA  L DI K G +  G+      F+   A+   KG+D+D  + 
Sbjct: 14  VLVLGAAGMGSATQAANADALADITKAGSINVGVFADFPPFSSASADMSLKGYDMDVAQY 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +    + +    +  + R   L   ++DIL         +E    + F        
Sbjct: 74  IADTLKVKLNPVA---VTGQNRIPYLNDHRVDIL---MSVGYSKEREQVIDFAAAYAPYY 127

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              I      +     L+  SI V  GT  + +L +   A         F+    +  A+
Sbjct: 128 IAVIGPAAMAVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRFDNYNSVIQAF 184

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + +             +    D          + S S +   + + +      V+    
Sbjct: 185 ISGQTQLMVVGNDVGAQVLAKQDALKPEQKFQLLTSPSHIG--LNKNEDALKKAVNDAIA 242

Query: 247 AMVTAEELGITQK 259
            M+   +L  + K
Sbjct: 243 KMLADGKLDESSK 255


>gi|238853899|ref|ZP_04644262.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|238833485|gb|EEQ25759.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
          Length = 498

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 12/228 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78
              S+L  IKK G L  GI+                 + G D++  + ++  +      +
Sbjct: 36  AEGSVLKKIKKSGELVVGISADYPPLEFTASENGKTKYVGVDIELAKDIAQDLGVK---L 92

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137
               ++     +AL++ ++D++      T  R+ S+  +            +  K     
Sbjct: 93  VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 152

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S+  L G +I  Q G+     +    K            ++  +  A ++ +  A   +
Sbjct: 153 TSIQSLKGQAIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 208

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +      N+     V      ++S  A AI +G  E    V+ T 
Sbjct: 209 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 255


>gi|330889586|gb|EGH22247.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 260

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 82/223 (36%), Gaps = 13/223 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   L+ G++     F    A+G   GFD+D   A+   +       +++  +      
Sbjct: 23  KEYKELRFGVDPSYAPFESKAADGTLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
            L++++ D +  +   T  RE    + F    +      +  K  G +   + L G ++ 
Sbjct: 80  GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVYKKGAGFTADPASLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + GT  E           +      +   +++ A   + R DA   D+       L + 
Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195

Query: 210 RPSEHVILP----DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +++ +      +++   P A  I +G+ E   ++     AM
Sbjct: 196 AGADYEVSKPIDSELLPAKP-AIGIAKGNKELKALLDKGIKAM 237


>gi|330832852|ref|YP_004401677.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|329307075|gb|AEB81491.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 732

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++ +FF            +K    +    +     F    ++  +KG D
Sbjct: 1   MKKKLLMLLASILPVFFIFTG--------VKADDTIDIVFDNAYAPFEFKDSDQIYKGLD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++       ++             A+Q+   D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +         K   ISS   L G ++ V+ GT  +  L +    +    +   F+  +
Sbjct: 108 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +  A   DA   D + +         
Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195



 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAEQ---Q 314

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KAKYGYTLKAFDEASSMYDSLNSGSIDAL 430

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253
             D      L     +                  A+ +G + E   + +    A+V + +
Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487

Query: 254 LG 255
             
Sbjct: 488 YD 489


>gi|325997819|gb|ADZ50027.1| putative amino acid ABC transporter protein [Helicobacter pylori
           2017]
          Length = 257

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L+I F   F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKK---ISCLLLVISFLGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 58  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 114 PYSYSGTIMLVRKDENRIKGIEDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALE 227

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 228 LINQAMQRLIN 238


>gi|150403688|ref|YP_001330982.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150034718|gb|ABR66831.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 251

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 85/239 (35%), Gaps = 11/239 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V IL +I L   +   + +   +  + G L  GI   +   A    N    GF++D    
Sbjct: 6   VLILSMIFLIIIAGCISQNTNKNTIQEGALTIGIAPDIYPMAYF-ENNVPTGFEIDLITE 64

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +  +P    +          A+++ ++D        T  RE    + F    +   
Sbjct: 65  IAKRMGLEPE---FKTYEFSSLLGAVENNKVDCAVAFITITPERENH--VDFSRCYFETY 119

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              ++ ++   + +  L    + V AG+T E  +  +    +M++  I +E + E+    
Sbjct: 120 TTILVREEDTSTCIRCLENRKVGVLAGSTQESLMEGF--KDDMEFELIPYENIREMHHDL 177

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   DA   +           D      ++   I  + +   I + + +  N ++   
Sbjct: 178 LSGNIDAEVFEYVCSKGFI---DNNDPVKVIGGKIDINYIGIPINEKNDDLRNEINNVI 233


>gi|224500426|ref|ZP_03668775.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes Finland 1988]
 gi|254827790|ref|ZP_05232477.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258600171|gb|EEW13496.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165]
          Length = 480

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 95/297 (31%), Gaps = 22/297 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+    FT    NA    +         G +T    F   + +G+ 
Sbjct: 1   MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT                +  +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ +    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +            + A  E     KN    +    N   + F+GI KSS      GL
Sbjct: 225 QELLEKFNAGLVNIKASGEYDKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281


>gi|57865360|ref|YP_189561.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus epidermidis RP62A]
 gi|251811883|ref|ZP_04826356.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875170|ref|ZP_06284043.1| bacterial extracellular solute-binding protein, family 3
           [Staphylococcus epidermidis SK135]
 gi|293367121|ref|ZP_06613792.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|57636018|gb|AAW52806.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus epidermidis RP62A]
 gi|251804680|gb|EES57337.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295935|gb|EFA88456.1| bacterial extracellular solute-binding protein, family 3
           [Staphylococcus epidermidis SK135]
 gi|291318682|gb|EFE59057.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329734612|gb|EGG70923.1| ABC transporter, substrate-binding protein, family 3
           [Staphylococcus epidermidis VCU045]
          Length = 262

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 71/214 (33%), Gaps = 15/214 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K   + I+ L+ +     + +++   +    K +  L+ G       F     N    G+
Sbjct: 2   KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKNDQLTGY 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A++     +  K+++   +    F  L + + D+++        RE      F 
Sbjct: 62  DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +     ++   +K I+S + + G  +  Q  T+    LA    A          + 
Sbjct: 117 EPYTYSSAVLVVRENEKDITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DVTKVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
             +      + R D    D  +    +       
Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204


>gi|300718407|ref|YP_003743210.1| cyclohexadienyl dehydratase [Erwinia billingiae Eb661]
 gi|299064243|emb|CAX61363.1| cyclohexadienyl dehydratase [Erwinia billingiae Eb661]
          Length = 260

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 80/257 (31%), Gaps = 10/257 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +      +L     ++  S L  + +   L          +  ++A+G ++G D
Sbjct: 1   MIKKIRIKSGVAALLLVAGGASAQSHLDRVLQSKVLTVCTTGDYKPYTFLRADGQYEGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   ++L+  +  +   ++++P   K       +KQ DI       TL R+ +   A   
Sbjct: 61  IAMAQSLAKNLGAE---VKWVPTTWKTLTPDFIAKQCDIALGGVSVTLKRQQTAWFATPL 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178
            T           KK   ++ QL+  S+ +      T E  +  Y    N      +F  
Sbjct: 118 GTDGKIPLVRCADKKKYRTIEQLNKPSVRLIEPAGGTNEAFVHAYLPQAN----LTLFHD 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I       + D    D S     +    +         +      A  + + D  W 
Sbjct: 174 NVTIFQQLVDKKADVMITDASEAMFQQKHYPKLCAINPEQPMQYGE-KAYMLPRDDLSWK 232

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +      E  
Sbjct: 233 LYVDQWLHLSNATGEYQ 249


>gi|262277191|ref|ZP_06054984.1| cyclohexadienyl dehydratase [alpha proteobacterium HIMB114]
 gi|262224294|gb|EEY74753.1| cyclohexadienyl dehydratase [alpha proteobacterium HIMB114]
          Length = 255

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 88/248 (35%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K     I  +I L     +   S L  I   G L+ G        +    +   +KGF
Sbjct: 1   MKKILSALIFIIISLS----AQAESSLNKILSSGELRVGTTGDWDPMSVKDPSANTYKGF 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +     K++++P   K     + S + DI   +T  T   + +    F 
Sbjct: 57  DIDVMNELAKDM---DVKVRFVPAEWKTIVSGITSNRYDI---STSVTKTPKRAKVAGFT 110

Query: 120 PITYFDGQG--FIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175
              Y  G     +       S+   L+    +I    GT+ E    ++F    +      
Sbjct: 111 NTYYKYGTVPLVLKKNLNKFSTWDSLNNKSVTIATTLGTSQEEKAKEFFPKSKLNSVEAP 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               +E+     A R D      S+  A KL    P   ++     + + LA  + +GD 
Sbjct: 171 ARDFQEVL----AGRADGNIT--SSTEANKLVIKYPQLAIVPDGEKNPAFLAMMVAKGDD 224

Query: 236 EWYNIVSW 243
           +W N V+ 
Sbjct: 225 KWRNYVND 232


>gi|260912989|ref|ZP_05919474.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260632979|gb|EEX51145.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 263

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    L  ++                +   +      F      G+  GFD
Sbjct: 25  MKKLLLTVLLASSALVASA--------------KDITFAMEPSYPPFESTNEKGEIIGFD 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +           L+ K  D      D T  R     ++F  
Sbjct: 71  VDIANAICKEI---QATCHFKGQAFDSLISGLKFKHFDASISAIDITEARAK--QVSFSE 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +      + VQ GTT +  +    K    +Y P+ +  ++
Sbjct: 126 SYYDSSASFIAVKGKADLTTA----KKVGVQNGTTFQQYVVAEAK----QYQPVPYASLQ 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + L  +    D        +       + L  A+ + + E  
Sbjct: 178 SAILDLKNGRIDVIFGDTAVLVDMLQKEDSLGFVGDKVTNKKYFGNGLGIAVNKANKELL 237

Query: 239 NIVSWTHYAMVTAEELG 255
           + ++    A+  + E  
Sbjct: 238 SELNKGLAAIKASGEYQ 254


>gi|153827855|ref|ZP_01980522.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|148876700|gb|EDL74835.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
          Length = 278

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 86/245 (35%), Gaps = 16/245 (6%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G     +K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137

Query: 134 K--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K  +G S +   +  ++ V A            +    K   + F+   +          
Sbjct: 138 KLAEGFSKLEDFNKRNVKVAAR--RGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNA 195

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHY 246
            A            + +      +   + +SK   A A+  G+ +        I   T  
Sbjct: 196 HAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTAD 254

Query: 247 AMVTA 251
             + A
Sbjct: 255 GWLQA 259


>gi|254250467|ref|ZP_04943786.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124879601|gb|EAY66957.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 260

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G  KGFD+D   AL + +    +K  ++  +      
Sbjct: 23  KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---KAKCVWVSSSFDGLIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            LQ+++ D++  +   T  R     + F    Y +    I     G +   ++L+G  + 
Sbjct: 80  GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E    + +         + +   ++  A     R D    D        L   
Sbjct: 138 VEQGTVQETYAREKWAPAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           R         ++  + +     A  + + DT+  + ++   
Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKADTDLRDALNRAI 236


>gi|260461492|ref|ZP_05809739.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259032562|gb|EEW33826.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 290

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 89/260 (34%), Gaps = 10/260 (3%)

Query: 3   KDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           K     +    +L         + + + S+L  +  RG L  G  +    +      G+ 
Sbjct: 12  KLGMAGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGEL 71

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+   R L+  +FDDP+K++++  +  +R   + + ++DI  +    T  R  S  +
Sbjct: 72  VGMDITMGRILAKGLFDDPTKVEFVMQDPAQRIPNVTTNKVDITIQFMTMTAQR--SQLI 129

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y +G   +        +  +L       +      +           +   +  
Sbjct: 130 NFTRPYYVEGVALLTLPNAENKTFDKLLAGGSATRISILQNVDAETSVHYALPQAQVMQI 189

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +    +  A  + R DA   D+S +  L      P ++              A+ QGD +
Sbjct: 190 DTQANVLQALESKRVDAAAVDLSTVRWLASR--NPDKYFDAGKSWYSMLYGAALRQGDLD 247

Query: 237 WYNIVSWTHYAMVTAEELGI 256
           W   V  T    +   E  +
Sbjct: 248 WLTFVDQTFTIAMFGHESAL 267


>gi|323485583|ref|ZP_08090927.1| hypothetical protein HMPREF9474_02678 [Clostridium symbiosum
           WAL-14163]
 gi|323692931|ref|ZP_08107153.1| glutamine-binding periplasmic protein [Clostridium symbiosum
           WAL-14673]
 gi|323401101|gb|EGA93455.1| hypothetical protein HMPREF9474_02678 [Clostridium symbiosum
           WAL-14163]
 gi|323503014|gb|EGB18854.1| glutamine-binding periplasmic protein [Clostridium symbiosum
           WAL-14673]
          Length = 282

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 84/237 (35%), Gaps = 21/237 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    N     +     +GD  G DV+  +A+++ +     ++Q   +       A+ S 
Sbjct: 67  LVMATNAEFPPYEYY-EDGDIVGIDVEIAKAIAAKLG---MELQIEDMAFDAIIPAVTSG 122

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D  +     T  R+    + F        Q  I+ +   I+    L+G  I VQ GTT
Sbjct: 123 KADFGAAGMTVTEERQR--SVEFTDTYANSNQVAIVKEDSDITGSDALAGKIIGVQLGTT 180

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +    +   A         + +  E   +    + DA   D +   A     +      
Sbjct: 181 GDALATEIKDA-----TVERYNKGLEAVQSLTQGKIDAVVIDQATAEAFVKKTEG---IK 232

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           IL + +S+   A AI +G+ E    ++     +   EE       I+++     + +
Sbjct: 233 ILEEKMSEEEYAIAIKKGNMELVEKMNEAIKELK--EEGK-----IDEIVAKYMDAE 282


>gi|190891147|ref|YP_001977689.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190696426|gb|ACE90511.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 264

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 70/213 (32%), Gaps = 12/213 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71
           I L   + +   + L  +K RG L  G+      F  +   +   KG+++D  +AL+  +
Sbjct: 3   ISLLAATQAFADATLDRVKARGALTVGVILSGAPFGYIDPTSQTQKGYNLDIAKALADDL 62

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 +    +    R   LQ  ++DIL  N  +T  R   L     P     G   + 
Sbjct: 63  GVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP-YDRSGGAAVG 118

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  G+   + L G  +CV  G+     L + + A              E   A +   C
Sbjct: 119 RKDSGLKDWADLKGKPVCVSQGSNFTQPLIEKYGA-----EVKGLPSQPESLLALQGGNC 173

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                         L  DRP +      +    
Sbjct: 174 --VVAVHVGATLGLLLQDRPEDWKDYAILFPTE 204


>gi|323527838|ref|YP_004229991.1| Arogenate dehydratase [Burkholderia sp. CCGE1001]
 gi|323384840|gb|ADX56931.1| Arogenate dehydratase [Burkholderia sp. CCGE1001]
          Length = 265

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 82/272 (30%), Gaps = 24/272 (8%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K     +  L  +           +  +  AS L +I  RG L+         ++  K
Sbjct: 1   MKKVALALLGALTGILIHSGAAQAQASGTAATASRLDEILARGTLRACTTGDYKPYSFYK 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           A+G ++G D+D   +L+ ++      ++    N    F+A    + DI       TL R+
Sbjct: 61  ADGQFEGIDIDMTESLAKSLGVKAEYVKTSWSNLMNDFVA----KCDIGVGGVSPTLERQ 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAH 167
                 F      DG+  I+           +        + V  G T E     +F   
Sbjct: 117 K--RAFFTQAYMVDGKTPIVRCDDVNKYQTVAQIDQPATRVIVNPGGTNERFAKQFFTHA 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           N      V+     I     A + D    D S    L+   +     V           A
Sbjct: 175 N----VTVYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKA 229

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
             + +GD  +   V    +      E      
Sbjct: 230 WLLPRGDVVFQQYVDQWLHLARATGEYQAVSD 261


>gi|21106699|gb|AAM35487.1| cyclohexadienyl dehydratase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 268

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 81/252 (32%), Gaps = 6/252 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + + +  L+    T  +T AS L  + + G L+         ++ ++ +G ++G D+D 
Sbjct: 11  RYRICLALLLSCGTTHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRDDGQFEGSDIDL 70

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            ++L++++    ++++ +  +       L + + DI       TL R+     +      
Sbjct: 71  VQSLAASL---DARVRLVRTSWPHLLPDLLADRCDIAVGGISVTLQRQRQASFSAVLDVD 127

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                     +    ++ QL+   + +            +      +    +F     I 
Sbjct: 128 GKIPLVRCVDQARYRTLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQAALRLFADNTTIF 185

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               AHR D    D S     +              +      A  + + D  W   V  
Sbjct: 186 QELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAYVDQ 244

Query: 244 THYAMVTAEELG 255
             +    + E  
Sbjct: 245 WLHLTKASGEYR 256


>gi|77748538|ref|NP_640951.2| cyclohexadienyl dehydratase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 259

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 81/252 (32%), Gaps = 6/252 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + + +  L+    T  +T AS L  + + G L+         ++ ++ +G ++G D+D 
Sbjct: 2   RYRICLALLLSCGTTHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRDDGQFEGSDIDL 61

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            ++L++++    ++++ +  +       L + + DI       TL R+     +      
Sbjct: 62  VQSLAASL---DARVRLVRTSWPHLLPDLLADRCDIAVGGISVTLQRQRQASFSAVLDVD 118

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                     +    ++ QL+   + +            +      +    +F     I 
Sbjct: 119 GKIPLVRCVDQARYRTLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQAALRLFADNTTIF 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               AHR D    D S     +              +      A  + + D  W   V  
Sbjct: 177 QELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAYVDQ 235

Query: 244 THYAMVTAEELG 255
             +    + E  
Sbjct: 236 WLHLTKASGEYR 247


>gi|46907078|ref|YP_013467.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b F2365]
 gi|224503184|ref|ZP_03671491.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL R2-561]
 gi|254832188|ref|ZP_05236843.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes 10403S]
 gi|255520210|ref|ZP_05387447.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL J1-175]
 gi|284801176|ref|YP_003413041.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578]
 gi|284994318|ref|YP_003416086.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923]
 gi|46880345|gb|AAT03644.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|284056738|gb|ADB67679.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578]
 gi|284059785|gb|ADB70724.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923]
          Length = 480

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 95/297 (31%), Gaps = 22/297 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+    FT    NA    +         G +T    F   + +G+ 
Sbjct: 1   MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT                +  +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ +    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +            + A  E     KN    +    N   + F+GI KSS      GL
Sbjct: 225 QELLEKFNAGLVNIKASGEYEKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281


>gi|107028450|ref|YP_625545.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116686445|ref|YP_839692.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105897614|gb|ABF80572.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652160|gb|ABK12799.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 260

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G  KGFD+D   AL + +    +K  ++  +      
Sbjct: 23  KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---KAKCVWVSSSFDGLIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            LQ+++ D++  +   T  R     + F    Y +    I     G +   ++L+G  + 
Sbjct: 80  GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E    + +         + +   ++  A     R D    D        L   
Sbjct: 138 VEQGTVQETYAREKWAPAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           R         ++  + +     A  + + DT+  + ++   
Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKADTDLRDALNRAI 236


>gi|121608892|ref|YP_996699.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121553532|gb|ABM57681.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 265

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 78/225 (34%), Gaps = 14/225 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G+      F EV  +G  KGFDVD   AL   +     K  ++         AL S 
Sbjct: 30  IRIGVEGEYAPFNEVDKDGKVKGFDVDIANALCDEM---RVKCSFVIQTWDGIIPALISS 86

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154
           + D++  +   T  R+    +AF    Y D    +  K K ++  S    G +I VQ  +
Sbjct: 87  KYDMIVSSVLITEKRKK--AVAFSKPYYTDQAVIVGPKGKAMTIRSDGFEGKTIGVQTAS 144

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE- 213
             E  L + F           +  V + +      R DA       +     TN+  +  
Sbjct: 145 VYEKILKEKFPTA----TAKSYAAVPDHNLDLGNGRLDAVLAAQLPMLEWLKTNEGKNFE 200

Query: 214 ---HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                 +      +    A+ +GDT   N V+     +    +  
Sbjct: 201 VKGQPFMDAKFMGAGAGVALRKGDTGLLNKVNAALDTIFKNGKYD 245


>gi|330985963|gb|EGH84066.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 266

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 85/242 (35%), Gaps = 11/242 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66
            +  L  L  +S +   + L  I++R  L  G+      F  +       KG +V+    
Sbjct: 1   MLGVLASLTVSSAALADATLDRIQERHRLVVGVLLSGGPFGSIDPQTRKPKGVNVELAED 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +  D   ++ + +    R   LQ  ++D+L  N +WT  R   LG    P     G
Sbjct: 61  IGKRLGVD---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLGSVPTPFYRVGG 117

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              ++ K   I+    L G  +C   G++    L +             F+   E   A 
Sbjct: 118 TAAVL-KDSKITRWEDLKGQPVCTSQGSSYIKALTE------FGADIKAFKSSSESLLAL 170

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           R + C A   D + +  L   ND   ++  +   ++ +P       G+ +    +     
Sbjct: 171 RGNNCVAAVHDATLVNPLLAGNDEWKDYRAITPELNPAPSVIWTRSGEADTQKRLDSIVQ 230

Query: 247 AM 248
             
Sbjct: 231 EW 232


>gi|329726546|gb|EGG63009.1| ABC transporter, substrate-binding protein, family 3
           [Staphylococcus epidermidis VCU144]
 gi|329734947|gb|EGG71244.1| ABC transporter, substrate-binding protein, family 3
           [Staphylococcus epidermidis VCU028]
          Length = 262

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 70/214 (32%), Gaps = 15/214 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K   + I+ L+ +     + +++   +    K +  L+ G       F          G+
Sbjct: 2   KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKKDQLTGY 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A++     +  K+++   +    F  L + + D+++        RE      F 
Sbjct: 62  DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +     ++   +K I+S + + G  +  Q  T+    LA    A          + 
Sbjct: 117 EPYTYSSAVLVVRENEKDITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DITKVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
             +      + R D    D  +    +       
Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204


>gi|261866997|ref|YP_003254919.1| L-cystine-binding protein TcyA [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412329|gb|ACX81700.1| L-cystine-binding protein TcyA [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 259

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 21/262 (8%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K       +L  + L   + +    I   ++K   L  G       F     +G   G
Sbjct: 1   MKKSILAKTLLLTGLALGIATQAAAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   +++  +     KIQ+        +  L +K+ D+++  T      E      +
Sbjct: 61  FDVEIIESVAQRLG---LKIQFNETQWDSMYAGLNAKRFDLIANQTS--PSPERLKKYLY 115

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +     +  +    I +   L G     Q+ T+    +A    A       IV +
Sbjct: 116 TTPYNYSTAVIVTKEGDDSIKAFEDLKGKK-AAQSLTSNYGKIAKANGA-----ELIVVD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            + +        R      D  A+             + +     K P   A+++G+   
Sbjct: 170 GLAQALKLITQDRAQTVVNDQLAVLDYFKKQPNAGLKIAVK-RDEKVPSGFAVLKGEEPL 228

Query: 238 YNIVSWTHYAMVTAEELGITQK 259
              ++         EEL     
Sbjct: 229 VEKINQAL------EELRKDGT 244


>gi|206564411|ref|YP_002235174.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198040451|emb|CAR56436.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 257

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 91/252 (36%), Gaps = 18/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F++ L  + +   + S +A           ++ GI+           +G  KGFD
Sbjct: 1   MKR--FLAPLVSLCIGLAATSASA------LDAPVVRLGIDPTYPPMDAKAPDGSLKGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +         + Q++ L       ALQ+++ID +  +   T  RE    + F  
Sbjct: 53  VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITAKREK--QILFSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +     G+  + + L+G  + VQ+GT  E     ++    +    + ++  
Sbjct: 108 KLFRFKSRLVARPGSGLDGTAASLAGKRVGVQSGTQFESWALAHWAPAGVG--VVPYKSQ 165

Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +++ A     R DA       +    L+    +    V  P  +    +   + Q DT  
Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRQPRGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225

Query: 238 YNIVSWTHYAMV 249
              +     +M+
Sbjct: 226 KASIDGAIASML 237


>gi|325507519|gb|ADZ19155.1| Glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum EA 2018]
          Length = 489

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 79/241 (32%), Gaps = 13/241 (5%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K F V +L +     IL     ++N++               +     F     + D+
Sbjct: 1   MKKKFLVLVLAIMMCFAILLTGCENSNSNSDKSKTSSKKYTIATDATYAPFEFRTGS-DY 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D+D   A++     +       P+N      ALQS Q+D           R+ +  L
Sbjct: 60  QGIDIDILSAIAKK---ENFTYDLKPMNFNGIIPALQSNQVDGSVSGMSINDERKKT--L 114

Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    Y  G   +       + +++ + G +  ++ GT          + +        
Sbjct: 115 DFSNSYYDSGLCVVAKSDNKSVKTINDIKGKTAALKKGTAGAAYAEANKEKYG--LTLKY 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+    +  A      D    D   +      +      ++  + I+ SP   A+ +G  
Sbjct: 173 FDDSPSMFQAVMNGNADITLEDYPVIAYKISIDKNSGLKIVGDEKITTSPYGFAVKKGTN 232

Query: 236 E 236
           +
Sbjct: 233 K 233


>gi|317050660|ref|YP_004111776.1| family 3 extracellular solute-binding protein [Desulfurispirillum
           indicum S5]
 gi|316945744|gb|ADU65220.1| extracellular solute-binding protein family 3 [Desulfurispirillum
           indicum S5]
          Length = 261

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G+      F    A G+  G  V+  RA+   +  +   +    +       AL++ 
Sbjct: 28  LIVGMELSYPPFEMTDARGEPSGISVEMARAIGEILGRE---VIIENIPFDGLIPALRTG 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAG 153
           +I ++  +   T  R     + F       G   ++++   ++S+ +L   G  I V+ G
Sbjct: 85  KIHMILSSMTATQERARV--VDFSEPYLSTGLCLLLNRASEVTSIDELNRPGVVIAVKRG 142

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT     + +          +V ++           + DA+  D  ++Y+          
Sbjct: 143 TTGHAYASRHLSQA----RILVLDKEAAAVLELVQGKIDAFIYDQMSVYS--HWQRNRET 196

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              + +   +   A  + +G  +    ++   
Sbjct: 197 TRAILEPFQREYWAVGLPKGSEDLRLQINDAL 228


>gi|326693556|ref|ZP_08230561.1| amino acid ABC transporter substrate-binding protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 263

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 18/252 (7%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDW 56
           M K   +   L ++       + + +   +  +    G L  G+      F+  + NG  
Sbjct: 1   MKKIIIIVASLVVVAGLAIGLTQHQARPKEASQTITPGTLTIGLEGTFAPFSYRQ-NGQL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF+VD   A++  +   P   +Y+          L +K+ D++  +   T  R+     
Sbjct: 60  TGFEVDLSTAIAKKLGLKP---KYVQTKWDSLIAGLGAKRYDVVFNDVGITPERQK--AY 114

Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F     +     I       +++++ L G  +  Q+ T+    L     A       + 
Sbjct: 115 LFAAPYLYAKTVLIKRTDETHLNTLADLKGKKMA-QSTTSNFGAL-----AKKSGADIVA 168

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGD 234
              + E        R D    D+ A    K  N   +   + L      +P AP + + +
Sbjct: 169 VPGMTEAMNLVTTKRADGALNDLGAYATWKKANPDAATTAVDLSQESPATPAAPLLNKQN 228

Query: 235 TEWYNIVSWTHY 246
           T     ++    
Sbjct: 229 TALQKAINNALK 240


>gi|322377286|ref|ZP_08051778.1| ABC transporter, substrate-binding protein [Streptococcus sp. M334]
 gi|321281999|gb|EFX59007.1| ABC transporter, substrate-binding protein [Streptococcus sp. M334]
          Length = 276

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 14/254 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G++  +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEVASKKEIIVATNATPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYNMAVSNISYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H+     + 
Sbjct: 116 LYAAPTAKNPNVLVVKKDDPSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHSDNPTVLK 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + +       ++     + P     + +
Sbjct: 176 YTKADFQQIMGRLSDGQFDYKIFDK-IGVETVIKDQGLDNLKVIELPSDQQPYVYPLLAK 234

Query: 233 GDTEWYNIVSWTHY 246
           G  E  + V     
Sbjct: 235 GQDELKSFVDKRIQ 248


>gi|259908949|ref|YP_002649305.1| Arginine-binding periplasmic protein 2 [Erwinia pyrifoliae Ep1/96]
 gi|224964571|emb|CAX56084.1| Arginine-binding periplasmic protein 2 [Erwinia pyrifoliae Ep1/96]
 gi|283478955|emb|CAY74871.1| Arginine ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
          Length = 243

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  +     +                ++   +     F  +       GFD
Sbjct: 1   MKKIVLAALLASVAFATQAAE-------------KIRFASSATYPPFESLNGENQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    ++  +          AL+ ++ D +    D T  R  S  ++F  
Sbjct: 48  IDLANALCAQM---KAECSFSNNPFDSLVPALKFRRYDAVISGMDITTER--SKQVSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +    I  K    S+++QL G  + V+ GTT +  L       + +   + ++  +
Sbjct: 103 PYYANSAIVIAQKG-KFSTIAQLKGKRVGVENGTTHQKYLQ----GKHPEMITVAYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R +   GD + +     TN   +     I       + +  A+ + +    
Sbjct: 158 NAILDLKNGRLEGILGDSAVVGGWLKTNANLATVGEHITDSDFFGTGVGIAVRKDNQALL 217

Query: 239 NIVSWTH 245
              +   
Sbjct: 218 KQFNAAI 224


>gi|325570015|ref|ZP_08145940.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156843|gb|EGC69014.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 760

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 76/251 (30%), Gaps = 16/251 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    +++ LII  FT    +AS           K G +     F     N ++ G D+
Sbjct: 46  RKHMSFALIALIISIFTLSVKSASAEET-----TYKIGTDLTFAPFEFQNENNEYVGIDI 100

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++         +   PL        +QS Q+D +      T  R+ +    F   
Sbjct: 101 DLLNAIAED---QGFAVDLRPLGFDASIQGVQSNQLDGMIAGMSITEERKET--FDFSDP 155

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +  G    +      I+S   L G ++  + GT +   L      +            +
Sbjct: 156 YFDSGIQMAVAADNDSITSYEDLEGETVGAKVGTESARFLESNKDQYGYDIKL-----YD 210

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    Y A R             L    +      ++ +    +    A+ +G  +    
Sbjct: 211 DATGLYGAVRNGTVAAAFDDYPVLGYAINNGEPMKLVGEPEKGASYGFAVRKGQNQELLE 270

Query: 241 VSWTHYAMVTA 251
                 A + A
Sbjct: 271 KFNAGLANMKA 281



 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 78/243 (32%), Gaps = 15/243 (6%)

Query: 18  TSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           T+  T+A     +K   K+   +   ++    F     + ++ G DVD     ++ +   
Sbjct: 294 TTSDTDAGTSEMVKVEPKKDVYRIASDSAFAPFEFQNEDNEYVGIDVDLMNR-AAELQG- 351

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
              I++  +       AL   Q D +      T  R       F    +  G    + + 
Sbjct: 352 -FNIEFNFIGFSGALQALDGNQADGMIAGMTITDER--RQSYDFSDSYFESGIQLAVKEG 408

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+S   L G ++  + GT +   L    + +        ++  +++ AA    + DA
Sbjct: 409 NDSINSYEDLDGKTVGAKVGTESADFLIANEEKYGYS--IKYYDAADQLYAAVNGGQIDA 466

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D   +        +    V   +  S      A+ +  + E   + +     M    
Sbjct: 467 MMDDYPVIGYAISQGQK---LVTPIEKESGGQYGFAVKKGQNPELIQMFNEALKEMKRTG 523

Query: 253 ELG 255
           E  
Sbjct: 524 EYD 526


>gi|306833827|ref|ZP_07466952.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424021|gb|EFM27162.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 739

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +   +++    F     +G+++G DV+  +A++     +
Sbjct: 269 LTLTGDASAKATP--VKSTYKIV--MDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN 324

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++           A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 325 ---VEISNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSDAYYTSNILLAVKSG 379

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + S S L G ++  + GT++   L+++   +        F+    +  +  +   DA 
Sbjct: 380 SSVKSYSDLKGLTVGAKNGTSSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDAL 437

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEE 253
             D      L     +  +               A+ +  + E   + +    A+V + E
Sbjct: 438 MDDE---AVLLYAIQQGRDFETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGE 494

Query: 254 LG 255
             
Sbjct: 495 YD 496



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 67/211 (31%), Gaps = 18/211 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       +L +  +FF       A           +    +T    F    ++  +KG 
Sbjct: 1   MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++     D  +             A+Q+ Q D L   T  T  R+      F 
Sbjct: 52  DVDIIKEVAKREGWDYEQ---TYPGFDAAVNAVQAGQADALMAGTTVTDARKKV--FTFS 106

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y              IS  SQL G ++ V+ GT  +  L ++  A    Y    F+ 
Sbjct: 107 DTYYDTSIVIYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEH--ADKYDYTVKTFDT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + ++ +  +   DA   D   +        
Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAINQGK 195


>gi|283478992|emb|CAY74908.1| glutamine ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
          Length = 249

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 12/216 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   +  G++ GFD+D   A++  +  +       P++      A
Sbjct: 24  AEKKLVVATDTAFVPFEFKQG-GNYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICV 150
           LQ++ ID+       T  R+    +AF    Y  G    +      +  +  L+G  + V
Sbjct: 80  LQTRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVNANNDSVKGIDDLNGKVVAV 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT +      + K          F  ++        +R DA   D   +     T  +
Sbjct: 138 KSGTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGK 193

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +   + D I       A  +G  +    V+    
Sbjct: 194 G-QFKAVGDSIEAQQYGIAFPKGSDDLREKVNGALK 228


>gi|221198919|ref|ZP_03571964.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
 gi|221205179|ref|ZP_03578195.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221174970|gb|EEE07401.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221181370|gb|EEE13772.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
          Length = 262

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G  +GFD+D   AL + +    +K  ++  +      
Sbjct: 25  KEWTTIRIGVDPTYPPFESTATDGSVQGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 81

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            LQ+++ D++  +   T  R     + F    Y +    I     G +   ++L+G  I 
Sbjct: 82  GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRIA 139

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E    + + A       + +   ++  A     R D    D        L   
Sbjct: 140 VEQGTIQETYAREKWAAAK--VEVVPYPSYDQAYADLVDGRVDGVLMDAVQGQLGFLATP 197

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           R         ++    +     A  + + DT+  + ++   
Sbjct: 198 RGKGFSFAGGVVYDPKIMGNGDAAGVRKADTDLRDALNRAI 238


>gi|218680404|ref|ZP_03528301.1| putative periplasmic binding ABC transporter protein [Rhizobium
           etli CIAT 894]
          Length = 245

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 75/212 (35%), Gaps = 15/212 (7%)

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              FA   A+G+W+G++VDF +A+ +    D       P+       AL + +ID++  +
Sbjct: 21  YPPFASPDASGNWEGWEVDFMKAICAEAKLD---CVITPVAWDGIIPALTANKIDMIIGS 77

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLAD 162
              T  R     + F    Y      +  K +   S  + L G  I VQ  T  +     
Sbjct: 78  MSITAER--LQTIDFSDKYYNSPSAIVGLKGEQFGSTPETLKGKVIGVQVATRHQAYANK 135

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
           YF           +   +E +    + R DA   D  A+     +    +    L   + 
Sbjct: 136 YFGEAG--ATVKGYPTQDEHNNDLVSGRIDAVQTDFLAIKDFLKSEQGAAC-CDLKGTVK 192

Query: 223 KSP------LAPAIIQGDTEWYNIVSWTHYAM 248
             P          + +G+TE    ++    A+
Sbjct: 193 DEPEILGFGKGVGLRKGETELKEKINAAIKAI 224


>gi|218507340|ref|ZP_03505218.1| ABC transporter substrate-binding protein [Rhizobium etli Brasil 5]
          Length = 223

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 8/203 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           +I   + + F +   +A    ++K  G +  GI      +  V  +    GFD DF + L
Sbjct: 17  AIGLGLFVAFGAGQADAQSFAELKANGKIVIGIQGENPPWGFVDESNQSAGFDADFAKLL 76

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              I      +++  +    R   L + ++D L          + +  + F         
Sbjct: 77  GDEIG---VPVEFNRVAVANRIPTLMTNKVDALIAVMGM--YPDRAKVVQFTKPYSAIDI 131

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             +   +  I +   L G  I V   +  +  +               F+       A+ 
Sbjct: 132 ILLAKPETNIKAPEDLKGLRIAVARSSAQDTQVTKNAPE---GATIQRFDDDATAIQAFL 188

Query: 188 AHRCDAYTGDISALYALKLTNDR 210
           + + DA   + +   ++      
Sbjct: 189 SGQVDALGANNTYFLSIAKIAPD 211


>gi|13474523|ref|NP_106092.1| hypothetical protein mll5423 [Mesorhizobium loti MAFF303099]
 gi|14025277|dbj|BAB51878.1| mll5423 [Mesorhizobium loti MAFF303099]
          Length = 265

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 66/214 (30%), Gaps = 10/214 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F     +G ++GF+VD     +  I           L  +  F A  S
Sbjct: 29  VLNVGAYPTNPPFEYKNESGIFEGFEVDIVNEAAKRIG---MTTDIADLGFQALFAATTS 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ID+   +   T  R      +F    Y    G        +++ + L G  + V +G+
Sbjct: 86  KRIDVAISSITITAER--LKSQSFTQPYYDSDMGIATKTDSAVNTEADLKGKIVGVLSGS 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E  +  + +A         ++  + +     A R DA   DI  +             
Sbjct: 144 TGESWVKAHQEADGFS-DVKGYDTQQNLLLDLSAGRVDAAVSDIPGMEYSFTKMKDLKVK 202

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +            + +        ++    AM
Sbjct: 203 QRIKTG---EQYGLMMTKDHP-LLGKLNDALTAM 232


>gi|329116273|ref|ZP_08244990.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326906678|gb|EGE53592.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 724

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 64/210 (30%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++                I     +K   +T    F    ++  +KG D
Sbjct: 1   MKNKLKVFMLAILSTTLLFGG--------IASAETIKIVSDTAYAPFEYKDSDQVYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D    +           A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRQNWDY---KMTYPGFDAAVNAVQSGQADALMAGTTITEERQKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS  SQL G ++ V+ GT ++  L      +  K     F+  +
Sbjct: 108 PYYDTKIVIATKKAHPISKYSQLKGKTVGVKNGTASQTFLDQNKDKYGFK--VKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +       A   D   +      N  
Sbjct: 166 LMYNSLATGSVQAVMDDQPVIQFAINQNQD 195



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 65/226 (28%), Gaps = 18/226 (7%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +    TS     +    +K+   +    ++    F      G + G D+D  +A++    
Sbjct: 250 VSTTLTSTGDANNKAKPVKETYKIVA--DSSFAPFEFQNGKGKYVGIDMDLIKAIAKQ-- 305

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               KI+           A+QS Q D        T  R+      F    Y       + 
Sbjct: 306 -QGFKIEVSNPGFDAALNAVQSGQADAAIAGMSITDTRKEI--FDFSDSYYTSNILLGVK 362

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I +   L G ++  + GT +   L          +    F+    +  +  +    
Sbjct: 363 SGNSIKAYKDLKGTTVGAKKGTASYDFLDKI--KDKYNFKLKAFDEASSMYDSLNSGSIK 420

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDT 235
           A   D + L        +          I+  P      A+ +G  
Sbjct: 421 ALMDDEAILKYSIQQGRK------FDTPINGEPSGEYGFAVKKGTN 460


>gi|27468911|ref|NP_765548.1| ABC transporter (periplasmic amino acid-binding protein)
           [Staphylococcus epidermidis ATCC 12228]
 gi|27316459|gb|AAO05634.1|AE016750_239 ABC transporter (periplasmic amino acid-binding protein)
           [Staphylococcus epidermidis ATCC 12228]
          Length = 262

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 70/214 (32%), Gaps = 15/214 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K   + I+ L+ +     + +++   +    K +  L+ G       F          G+
Sbjct: 2   KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKKDQLTGY 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A++     +  K+++   +    F  L + + D+++        RE      F 
Sbjct: 62  DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +     ++   +K I+S + + G  +  Q  T+    LA    A          + 
Sbjct: 117 EPYTYSSAVLVVRENEKDITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DVTKVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
             +      + R D    D  +    +       
Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204


>gi|289168045|ref|YP_003446314.1| ABC transporter membrane spanning permease-glutamine transport
           [Streptococcus mitis B6]
 gi|288907612|emb|CBJ22449.1| ABC transporter membrane spanning permease-glutamine transport
           [Streptococcus mitis B6]
          Length = 721

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QLSG ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKAHKISQYDQLSGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGSIDAMMDDKPVIEYAINQGQD 193



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 19/232 (8%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+ +         A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEIINPGFDAAINAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +        
Sbjct: 344 FDFSDSYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGY--QIKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           F     +  +      DA   D   L        +      L   I  SP+ 
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQK------LKTPIPGSPIG 447


>gi|254513061|ref|ZP_05125127.1| putative carboxycyclohexadienyl dehydratase [Rhodobacteraceae
           bacterium KLH11]
 gi|221533060|gb|EEE36055.1| putative carboxycyclohexadienyl dehydratase [Rhodobacteraceae
           bacterium KLH11]
          Length = 256

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 81/246 (32%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M      +    + L  ++ +   S L ++   G LK G        +        +KG+
Sbjct: 1   MNTFLKAAATAALGLVLSTAAQAQSALNEVLDSGVLKVGTTGDWNPMSLRDPATNSYKGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L++ +  +   ++Y+P + K     + + +   L+ +   +  R    G +  
Sbjct: 61  DIDIMNELAADLGVE---VEYVPTDWKTLVNGVVAGKYH-LTGSASISPPRMKVAGFSES 116

Query: 120 PITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            I        +  K             G  +    GTT E  + ++F          V E
Sbjct: 117 YIAVELFPYTLKDKADKFDGYASINQPGVRVATTLGTTFEKRVREWFP----NADIKVVE 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D +         L+     P   V      S SP+A  + QGD  W
Sbjct: 173 APARGFQEVIAGRADVFITSNIEGSTLEAKF--PVVRVKNAGPRSPSPIAMILPQGDQIW 230

Query: 238 YNIVSW 243
            N V+ 
Sbjct: 231 INYVNN 236


>gi|170703473|ref|ZP_02894239.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170131617|gb|EDT00179.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 262

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 77/253 (30%), Gaps = 24/253 (9%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M       ++      L   +   +            L+ G+      F     NGD +G
Sbjct: 1   MKHGHTLKLAFALACALGTGAAFADGQT---------LRFGLEAQYPPFESKAPNGDLQG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+  +        +++  +      AL+ ++ D ++   + T  R     + F
Sbjct: 52  FDIDVGNAVCQSA---KLSCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDF 106

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             I Y      I     G + +   L G  + V   +  E     +++   +    + ++
Sbjct: 107 TTIIYRVPTQLIARTGSGLLPTPEALKGKRVGVLQASIQETYAKAHWEPAGVS--IVAYQ 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQ 232
              +  A   A R DA      A     L+         +   +         +A  + +
Sbjct: 165 DQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDKILGSGIAFGLRK 224

Query: 233 GDTEWYNIVSWTH 245
           GD      +    
Sbjct: 225 GDDALKAKLDAAI 237


>gi|47092054|ref|ZP_00229847.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|226223465|ref|YP_002757572.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes Clip81459]
 gi|254823885|ref|ZP_05228886.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254852338|ref|ZP_05241686.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|254931228|ref|ZP_05264587.1| glutamine ABC transporter [Listeria monocytogenes HPB2262]
 gi|254993068|ref|ZP_05275258.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes FSL J2-064]
 gi|300765789|ref|ZP_07075764.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|47019494|gb|EAL10234.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|225875927|emb|CAS04631.1| Putative Glutamine ABC transporter (binding and transport protein)
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258605645|gb|EEW18253.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293582776|gb|EFF94808.1| glutamine ABC transporter [Listeria monocytogenes HPB2262]
 gi|293593110|gb|EFG00871.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300513483|gb|EFK40555.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|328467121|gb|EGF38211.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes 1816]
 gi|328475546|gb|EGF46305.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes 220]
          Length = 480

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 95/297 (31%), Gaps = 22/297 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+    FT    NA    +         G +T    F   + +G+ 
Sbjct: 1   MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT                +  +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ +    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +            + A  E     +N    +    N   + F+GI KSS      GL
Sbjct: 225 QELLEKFNAGLVNIKASGEYDKILENYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281


>gi|329295892|ref|ZP_08253228.1| family 3 extracellular solute-binding protein [Plautia stali
           symbiont]
          Length = 273

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 15/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           M K   +S +   +L  +S     ++   IK++G L   I                  G 
Sbjct: 1   MKK-LLLSAISAALLLQSSAWAEIAVPASIKEKG-LTVTIMPNYPPMDFKDPPTNQLSGV 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D +  +A+   +      + +  +  ++   A+ +K++D++      T  R+    + F 
Sbjct: 59  DYELGQAIGEKLGVK---VNWQEIAFEQMVNAVVTKRVDLVMFGMTDTKERQKV--VNFI 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174
                  Q + +  +  I+S + L G  +     TT    +A + KAH           +
Sbjct: 114 DYFKTGPQFYTLAARSDINSATDLCGKRVGTSRRTTFPQEIATWSKAHCEAAGKPAIIVV 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   +     R  R D        L  +            L    S      A+ +  
Sbjct: 174 GAEGTADARTQLRQRRLDGAVQGSETLPYIINLEK--GTFKPLDKAFSFQYTGMALGKDA 231

Query: 235 TEWYNIVSWTHYAMVT 250
            E    +     AM+ 
Sbjct: 232 GELTTAIQAAINAMIA 247


>gi|22537750|ref|NP_688601.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae 2603V/R]
 gi|25011699|ref|NP_736094.1| hypothetical protein gbs1659 [Streptococcus agalactiae NEM316]
 gi|76788500|ref|YP_330228.1| polar amino acid ABC transporter polar amino acid-binding protein
           [Streptococcus agalactiae A909]
 gi|76798456|ref|ZP_00780694.1| amino acid ABC transporter substrate-binding protein [Streptococcus
           agalactiae 18RS21]
 gi|77405810|ref|ZP_00782894.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae H36B]
 gi|77411913|ref|ZP_00788244.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae CJB111]
 gi|22534641|gb|AAN00474.1|AE014265_3 amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae 2603V/R]
 gi|24413239|emb|CAD47318.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563557|gb|ABA46141.1| polar amino acid uptake (PAAT) family ABC transporter, polar amino
           acid-binding protein [Streptococcus agalactiae A909]
 gi|76586190|gb|EAO62710.1| amino acid ABC transporter substrate-binding protein [Streptococcus
           agalactiae 18RS21]
 gi|77162010|gb|EAO72990.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae CJB111]
 gi|77175597|gb|EAO78382.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae H36B]
 gi|319745515|gb|EFV97817.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus agalactiae ATCC 13813]
          Length = 285

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   + ++ L  +   + S   S       +IKK G LK      L   +    +   
Sbjct: 1   MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+++D  +   +       K++++ +   E F ++ S ++D+   N D T  R      
Sbjct: 61  TGYEIDMMK---AIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPER--LKKY 115

Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F     +   G I+        +   LS        G      +    K    +     
Sbjct: 116 NFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMK-IAKQQGAEPVIYD 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232
               +         R D    D     +    +T   P   V + D+  + +     + +
Sbjct: 175 NVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSK 234

Query: 233 GDTEWYNIVSWTHYAM 248
            D      +      M
Sbjct: 235 KDKSLKTKIDAAIKDM 250


>gi|317497562|ref|ZP_07955880.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895121|gb|EFV17285.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 276

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 83/252 (32%), Gaps = 27/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----------------NASILGDIKKRGFLKCGINTGL 44
           M K     ++  +I      +                  A  +    K   LK G++  +
Sbjct: 1   MKKILASLMMVGLIFCLGGCNVPWMKQKTEKTKATKVIQADKVEGTMKGMKLKVGVSNDM 60

Query: 45  VGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             F+   +      GFD+D    LS  +  +        +N K+    +++K++D+    
Sbjct: 61  APFSYYDSEQKKITGFDIDLLDKLSEYLGFEYELYP---MNMKKLEQKIKNKELDLAIAG 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
              T  R+     +F    Y      ++ K   I+   +++   + V  GT++     DY
Sbjct: 118 ISITDERQR--EFSFTDTYYETYLQIVVRKDSQITDRKEITEKKVGVVEGTSSAQYAEDY 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
               N       ++ + ++         DA   D + +      +   +   +L + ++ 
Sbjct: 176 LSEDN---KITYYKNITKVWNDLEKGTIDATIYDTTGIQNYMQEHADNTNLSVLNEQLNS 232

Query: 224 SP--LAPAIIQG 233
                    ++G
Sbjct: 233 EESNYGIMFVKG 244


>gi|228477049|ref|ZP_04061687.1| glutamine ABC transporter permease protein [Streptococcus
           salivarius SK126]
 gi|228251068|gb|EEK10239.1| glutamine ABC transporter permease protein [Streptococcus
           salivarius SK126]
          Length = 732

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L ++ +FF   +  ++          +    +T    F    ++  +KG D
Sbjct: 1   MKKKLLTLFLSVMSVFFVFGAKVSAE--------TISVVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRKNWD---VNQTFPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +S   QL G ++ V+ GT ++  L      +        F+  +
Sbjct: 108 TYYDTSIVIYTRSSDKVSDYKQLKGKTVGVKNGTASQTWLDKNASKYGF--TVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  +   DA   D   +         
Sbjct: 166 LMNNSLDSGSVDAAMDDTPVVKYAIGQGKD 195



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 11/219 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +      +++    F     +G + G DVD   A++    +    ++           A
Sbjct: 274 AKETYTISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNA 330

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS Q D +      T  R+      F    Y       + K   + S   L G ++  +
Sbjct: 331 VQSSQADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVAKGSKVKSYKDLKGKTVGAK 388

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT++   L D+   +        ++    +  +  +   DA   D      L     + 
Sbjct: 389 NGTSSYSWLEDHAGEYGF--TVRAYDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQG 443

Query: 212 SEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMV 249
                  + I+   +  A+ +  + E   + +    A+V
Sbjct: 444 RNFTTPIEGIATGEVGFAVKKGTNPELIEMFNNGLAAIV 482


>gi|282856045|ref|ZP_06265332.1| extracellular solute-binding protein family 3 [Pyramidobacter
           piscolens W5455]
 gi|282586127|gb|EFB91408.1| extracellular solute-binding protein family 3 [Pyramidobacter
           piscolens W5455]
          Length = 249

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 70/225 (31%), Gaps = 11/225 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            R  L     +    +      G+  GFD++    ++  +      +++L +       A
Sbjct: 26  DRDTLVAATESTYPPYESRNEKGELVGFDIELTETVAKKLGKK---VEWLDMPFDSLIPA 82

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S ++D+++     T  R     + F          F+   +        L+G  + VQ
Sbjct: 83  LMSGKVDLVAAGMSATPERAK--RVNFSAPYEISFSAFVTGIENPPQDTDALAGKIVAVQ 140

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-R 210
            GT     + + F           F++ ++        R  A   DI          D  
Sbjct: 141 IGT-----VQENFARSLGNVEVKTFQKFDDCVREVVLGRAAATLMDIPVAKQYVQAKDFA 195

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               V     I+ +  A A+ + D      V+     M    EL 
Sbjct: 196 GKVTVAFNKQITGADKAIAMPKQDEALTAAVNGVIEEMDKNGELA 240


>gi|148253604|ref|YP_001238189.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146405777|gb|ABQ34283.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 273

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 17/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M +  F+S      L   + +  A +  +IK+ G LK  +N+             + KG 
Sbjct: 1   MRRSLFISF---AALASLASAGAAELPAEIKQSGTLKLTVNSTYAPMEYHDPATNELKGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      I +      E   +LQ+K+ D +         R       F 
Sbjct: 58  DIDLANELAKRLGVK---IAWSETPFAELIPSLQTKRADFIISGISDRASR--RETADFV 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-----HNMKYHPI 174
                 G  F +  +     V  L G  I     T+    +  + KA            +
Sbjct: 113 D-YLVTGPQFFVLAESDAKVVIDLCGRKIGTTRSTSFPAEIEKWSKATCEASGKPAAQYV 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             E   ++    +  R DA       L      +    ++ I+ + I+         + +
Sbjct: 172 PGENSIDVRNQLKQGRIDAAVQGSETLP--YAQSQEAGKYRIVGEPIAFGYQGIMFRKDN 229

Query: 235 TEWYNIVSWTHYAMVT 250
             + ++++    AM+ 
Sbjct: 230 AGFRDLITDQLKAMIA 245


>gi|325919298|ref|ZP_08181338.1| cyclohexadienyl dehydratase [Xanthomonas gardneri ATCC 19865]
 gi|325550230|gb|EGD21044.1| cyclohexadienyl dehydratase [Xanthomonas gardneri ATCC 19865]
          Length = 276

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 83/251 (33%), Gaps = 11/251 (4%)

Query: 8   SILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++L  +++  ++ +   AS L  + + G L+         ++ ++A+G ++G D+   ++
Sbjct: 17  ALLAFLLICGSAHAAEPASRLDAVLRSGVLRVCTTGDYRPYSLLRADGHFEGSDIALAQS 76

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L +++    +++Q++  +  +    L + + DI       TL R+     +         
Sbjct: 77  LGASLG---ARVQFVRTSWPQLMPDLLADRCDIAVGGISVTLQRQRQASFSTVLDVDGKI 133

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                  +    S++QL+   + V      T E          N      +F     I  
Sbjct: 134 PLVRCADQTRYRSIAQLNRPDVRVIEPPGGTNEAFARRELPRAN----LRLFADNTTIFQ 189

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                R D    D S     +              +      A  + + D  W   V   
Sbjct: 190 ELVDQRADVMITDASEALYQQARLPTLCAIAPEQALQYGE-KAFLLPRDDPAWKAYVDQW 248

Query: 245 HYAMVTAEELG 255
            +    + E  
Sbjct: 249 LHLSKASGEYA 259


>gi|242243788|ref|ZP_04798232.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis W23144]
 gi|242232756|gb|EES35068.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis W23144]
 gi|319400135|gb|EFV88370.1| L-cystine-binding protein tcyA [Staphylococcus epidermidis FRI909]
          Length = 262

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 70/214 (32%), Gaps = 15/214 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K   + I+ L+ +     + +++   +    K +  L+ G       F          G+
Sbjct: 2   KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKKDQLTGY 61

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +A++     +  K+++   +    F  L + + D+++        RE      F 
Sbjct: 62  DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +     ++ + +  I+S + + G  +  Q  T+    LA    A          + 
Sbjct: 117 EPYTYSSAVLVVRENEKGITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DITKVDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
             +      + R D    D  +    +       
Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204


>gi|168491161|ref|ZP_02715304.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
 gi|183574490|gb|EDT95018.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
          Length = 721

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L   F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPTFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|296125972|ref|YP_003633224.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
 gi|296017788|gb|ADG71025.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
          Length = 254

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 23/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +     ++    L  +  + + S          IK    +  GI+     F  +  NG
Sbjct: 1   MKRILIFIMIISSALLSSCSNNSKSSNASNTAEETIKDP--IYVGIDVDFPPFGYLD-NG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  GFD D       A+       +++ +       ALQ+K+ID +      T  R+   
Sbjct: 58  NIAGFDYDIMSE---ALKLAGINGEFVHMQFSGLLPALQAKKIDAIVAGMTVTEERKQF- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F    Y   Q  ++HK    IS+   L+G +I V  GTT +  +++         + 
Sbjct: 114 -VNFTEPYYVSSQVMLVHKDDNTISTFDDLAGKNIGVVIGTTGDTVMSER-----TDINV 167

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F+       A ++ +  A   D       K       +  ++     +   A A+ + 
Sbjct: 168 EKFDTGAAAVLALKSKKISAVVFDKEPC---KNFAKYNDDIKLIESDAIEEDYAIAVRKE 224

Query: 234 DTEWYNIVSWTH 245
           DT     ++   
Sbjct: 225 DTLLLEKINEGL 236


>gi|168484864|ref|ZP_02709809.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|172041971|gb|EDT50017.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
          Length = 721

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L   F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPTFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|324992737|gb|EGC24657.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
          Length = 729

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 58/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F    +  A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGVTAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D                A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWDIDT---SFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L          +    F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKN--KDKYDFTLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 70/236 (29%), Gaps = 14/236 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +       ++    F     +  + G D++  +A++         ++           ++
Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q+ Q D +      T  R+ +    +    Y       +     I S  +L G ++ V+ 
Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT ++  L +    +        F     +  +       A   D   +        +  
Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
               L   I  +P    A          ++   +  +   +E G  Q+ +++    
Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLAS 499


>gi|307544137|ref|YP_003896616.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307216161|emb|CBV41431.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 255

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 75/252 (29%), Gaps = 23/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  +  +SI  L        +       +++    ++ G++          A+G+  GFD
Sbjct: 1   MKLNKLLSIGVLGAGMIAGVANA-----EVRD---IRIGVDVPYEPMEYRTADGELTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+   I  +    +++          L +++ D +  +      R     + F  
Sbjct: 53  IELGNAMCEEIGIE---CEWVVQGWDGIIPGLMARKYDAIMSSMTINDKR--REQVLFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +     +       I +     L   SI VQ GT  +  + D +           +  
Sbjct: 108 PYFTPPSAWFAPADSEIETPDAETLEDMSIGVQRGTLQDNYVTDMY---GDVADVNRYAT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            +++     + R D    D     +  L ++      +   I             A  + 
Sbjct: 165 ADDMVLDMDSGRLDIVFLDFPVGKSTLLDSEAGDYKTVGEQITEPKQYFGDGFGIAFRKR 224

Query: 234 DTEWYNIVSWTH 245
           D E     +   
Sbjct: 225 DEELAAAFNEAL 236


>gi|325142043|gb|EGC64474.1| L-cystine-binding protein tcyA precursor [Neisseria meningitidis
           961-5945]
          Length = 239

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 10/188 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + S++  I  +G +  G       F     +G   G+DV+  RA++  +      +++  
Sbjct: 2   SGSLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKE 58

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    L++ + D+++     T   E            + G   +      I S+  
Sbjct: 59  TQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDD 117

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           + G        +          KA       +  + + +        R DA   D  A+ 
Sbjct: 118 IKGVKTAQSLTSNYGE------KAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVL 171

Query: 203 ALKLTNDR 210
                N  
Sbjct: 172 DYLKKNPN 179


>gi|317014350|gb|ADU81786.1| amino acid ABC transporter [Helicobacter pylori Gambia94/24]
          Length = 257

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L+I  F  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKK---ISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 58  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 114 PYSYSGTIMLVRKDENRIKGIEDIRGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 227

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 228 LINQAMQRLIN 238


>gi|152970648|ref|YP_001335757.1| amino acid-binding protein [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150955497|gb|ABR77527.1| amino acid-binding protein [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
          Length = 245

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 74/235 (31%), Gaps = 16/235 (6%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           +I          A              G       F    +    +GFD+D  +A++ A 
Sbjct: 1   MIAALTAVGQAAAETY---------TVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAKAE 51

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             D   ++ +    +  F  L +   DI+      T  R+    + F    +   Q  ++
Sbjct: 52  GFD---VKLVNTPWEGIFATLNTGDRDIIISGITITDKRKQM--VDFSAPYFPAEQSIVV 106

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            +   + S++ L    + V   +T ++ +++    +        F+    +         
Sbjct: 107 AQDSQVDSLAALKNEKVGVVNSSTGDIVVSEVLGKN--STAIKRFDNTPLMLQELFEDGV 164

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            A  GD+  +      +      ++      +     A+ +G++E    ++    
Sbjct: 165 SAAVGDVGVVKYYIKQHPEKQFKLVPDAKFERQYFGIAVAKGNSELLGKINAGLQ 219


>gi|77414381|ref|ZP_00790536.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae 515]
 gi|77159571|gb|EAO70727.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae 515]
          Length = 285

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   + ++ L  +   + S   S       +IKK G LK      L   +    +   
Sbjct: 1   MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+++D  +   +       K++++ +   E F ++ S ++D+   N D T  R      
Sbjct: 61  TGYEIDMMK---AIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPER--LKKY 115

Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F     +   G I+        +   LS        G      +    K    +     
Sbjct: 116 NFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMK-IAKQQGAEPVIYD 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232
               +         R D    D     +    +T   P   V + D+  + +     + +
Sbjct: 175 NVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSK 234

Query: 233 GDTEWYNIVSWTHYAM 248
            D      +      M
Sbjct: 235 KDKSLKTKIDAAIKDM 250


>gi|327460181|gb|EGF06518.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 729

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 58/206 (28%), Gaps = 16/206 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F   +L L   F       A           +K   +T    F    ++  +KG DVD  
Sbjct: 12  FLAVLLTLFPFFALGARAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++     D   I            A+Q+ Q D +      T  RE           Y 
Sbjct: 63  NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   IS   QL G  + V+ GT  +  L      +        F+  + +  
Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210
           +  A   DA   D   +         
Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201



 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +       ++    F     +  + G D++  +A++         ++           ++
Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q+ Q D +      T  R+ +    +    Y       +     I S  +L G ++ V+ 
Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT ++  L +    +        F     +  +       A   D   +        +  
Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               L   I  +P    A          ++   +  +   +E G  Q+ +++        
Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503

Query: 272 D 272
            
Sbjct: 504 S 504


>gi|157692905|ref|YP_001487367.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681663|gb|ABV62807.1| spore amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus SAFR-032]
          Length = 254

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 12/224 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +     F     +    GFDVD   AL+         ++   ++      A
Sbjct: 32  DDKTLVMATSADYPPFESKDGD-KIVGFDVDLATALAKKNGYK---LEIQDMDFASLVSA 87

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++ + DI+      T  R+    L F  + Y      +  K  G+ +   L   ++ VQ
Sbjct: 88  LKTNKADIVLAGMTPTEKRKK--QLDFSDVYYNAKNLVVSKKSSGMKTEKDLKDKTVGVQ 145

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  +       K +N+K       ++ +I    +A R DA   +            + 
Sbjct: 146 LGSIQQDEANGLQKKYNLKVEDR--NKISDIIQEIKAGRFDAAIIEDKVAAGY---LKKE 200

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +        S    A A  + +++     + +   M    EL 
Sbjct: 201 KDFQAFGLNSSNEGSAIAFKK-NSDLTAKFNKSLKEMQDNGELD 243


>gi|91788587|ref|YP_549539.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91697812|gb|ABE44641.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 255

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 74/243 (30%), Gaps = 18/243 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             +   L  L         +          L  G +     FA    + D  G+DVD  +
Sbjct: 7   IAATAGLFTLALGGVHAQNT---------ELVVGSSATYRPFAYESPSKDIVGYDVDMIK 57

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++        KI+ +       F AL +  +D++         R+      F    +  
Sbjct: 58  AIAQKAG---LKIKIVNTPWTGIFAALNNGDLDLVISGVTINDKRK--QSYDFSTPYFEA 112

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            Q   +H       +  L+G  I V  G+T +   +  F   N       FE    + + 
Sbjct: 113 RQLLAVHSNSTAKGLKDLAGKKIGVVTGSTGDDMASREFGKTNPD--IRRFESTPVVISE 170

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +  DA  GD   +       +      +      K      + QG+    + ++   
Sbjct: 171 LANNGLDAAIGDNGVIAFRAQ--EHKQLKTVSDPAFPKEYFGIVVKQGNKALLDKLNAGL 228

Query: 246 YAM 248
            A+
Sbjct: 229 AAV 231


>gi|38046583|gb|AAR09153.1| arginine-binding periplasmic protein 2 [Mannheimia glucosida]
          Length = 238

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 73/257 (28%), Gaps = 31/257 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K          +LF    +  A  +  + +              F      G+  GFD
Sbjct: 1   MKKTLL------ALLFGCVVTAQAQDIKFVME---------PSYPPFEMTDEKGEIIGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +          +L+ KQ D        T  R+    + F  
Sbjct: 46  VDIANAICKEM---NANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKK--QVLFSE 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     FI  K    + V      +I VQ GTT +  LA   K +N       +   +
Sbjct: 101 PYFPSSAAFIAKKDIDFAKVK-----TIGVQNGTTYQHYLAKEKKEYN----VKSYASYQ 151

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R DA  GD+  L  +   ++        I         L  A    +    
Sbjct: 152 NAILDVQNGRIDAIFGDVPVLAEMARKHEGLDFVGEKINNPSYFGDGLGIATHLKNQALV 211

Query: 239 NIVSWTHYAMVTAEELG 255
              +     +    E  
Sbjct: 212 EQFNAALKTIKENGEYQ 228


>gi|307704942|ref|ZP_07641833.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
 gi|307621556|gb|EFO00602.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
          Length = 721

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIISKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTSD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452


>gi|295676202|ref|YP_003604726.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1002]
 gi|295436045|gb|ADG15215.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. CCGE1002]
          Length = 264

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 20/246 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F      G+ +GFD+D   A+ + +    +K  ++  +      AL+
Sbjct: 30  KEVRFGVEASYAPFESKSPAGELQGFDIDVGNAVCAKL---KAKCVWVENSFDGLIPALE 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++   ++ +   T  R     + F    Y      I  K   +  + + L G  + V  
Sbjct: 87  ARKFSAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSALQPTPASLKGKHVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +    +    + ++  ++I A   + R DA   D  A     L   + +
Sbjct: 145 GTIQETYAKARWSPAGVD--VVPYQTQDQIYADLASGRLDASFQDAEAASKGFLKKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
                   +S   L        + + D    + ++          EL      I++++  
Sbjct: 203 GFEFAGPAVSDDKLLGAGVGYGVRKNDKALKDALNGALK------ELKADGT-IDRLAAK 255

Query: 268 TTNPDV 273
             +  V
Sbjct: 256 YFDVKV 261


>gi|229514447|ref|ZP_04403908.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
 gi|229348427|gb|EEO13385.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
          Length = 278

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 86/247 (34%), Gaps = 20/247 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G     +K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137

Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           K  +G S +   +     I  + G  T     + F         + F+   +        
Sbjct: 138 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244
              A            + +      +   + +SK   A A+  G+ +        I   T
Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRT 252

Query: 245 HYAMVTA 251
               + A
Sbjct: 253 ADGWLQA 259


>gi|149002608|ref|ZP_01827540.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
 gi|147759219|gb|EDK66212.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
          Length = 229

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193


>gi|25028002|ref|NP_738056.1| putative secreted protein [Corynebacterium efficiens YS-314]
 gi|23493285|dbj|BAC18256.1| putative secreted protein [Corynebacterium efficiens YS-314]
          Length = 348

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 72/229 (31%), Gaps = 13/229 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +RG L  G N     F    ++G+  G ++D  RA++  +  D         +      +
Sbjct: 100 ERGVLTAGANPPFPPFEFKDSDGEIIGVEMDLARAMAGVMGLDYQP---QEQDFSLILPS 156

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +Q+  +D+ +        R   +   F    Y   Q      ++         G +I VQ
Sbjct: 157 VQAGTVDMGASGFTDNEER--RMNFDFIDFLYAGVQWAQSSDREEDIDPDNACGLTIAVQ 214

Query: 152 AGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
             T  E                     + ++  +    A    R DA   D         
Sbjct: 215 RTTVAETDDVRPKSEQCVAEGKEPITVLAYDTADTAATALILGRADALAADSPITAWAVA 274

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +D   E   + DI   +P   A+ + ++E   + +     ++   +  
Sbjct: 275 RSDDRIEL--VGDIFMAAPFGFALPK-ESELTPVAARAFQHLIDTGDYE 320


>gi|315639992|ref|ZP_07895119.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
 gi|315484254|gb|EFU74723.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
          Length = 286

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 78/255 (30%), Gaps = 17/255 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50
           M K F +S+  L  L   +  ++++              I+K   L    +  L   +  
Sbjct: 1   MKKSFVISLSILCSLLIFAGCSSSTSSSDTATTDTNWEKIEKNKTLTVATSGTLYPASYY 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +    G+D+D  + ++  +      ++Y   N   +  A+Q+   D+++ +      R
Sbjct: 61  NDDNQLVGYDIDVIKEVAKRLDLKVKTVEY---NVDGQLAAVQNGSADLIANDMSINETR 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                L+      F           GI+S   L G        TT  + +A+   A  + 
Sbjct: 118 AKKYTLSSPIKWSFGSMIVRKSDNSGITSFDDLKGKK-AAGEATTNYMKIAESMGATLVS 176

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
           Y        E+        R D    D                 ++     + S     +
Sbjct: 177 YD---NATNEQYLTDVANGRTDVILNDYYLQKMATAALPDVPVKILPDMYFNLSSSGFLM 233

Query: 231 IQGDTEWYNIVSWTH 245
            +  T     ++ T 
Sbjct: 234 KKTSTTLEKKINQTI 248


>gi|308172212|ref|YP_003918917.1| cystine ABC transporter binding protein [Bacillus amyloliquefaciens
           DSM 7]
 gi|307605076|emb|CBI41447.1| cystine ABC transporter (binding protein) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 256

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 73/251 (29%), Gaps = 18/251 (7%)

Query: 5   FFVSILCLIILF----FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
             VSI  L          S S +  +   +KK+G L  G       F           G+
Sbjct: 1   MMVSIAVLAACGNSQDSGSKSKDGDLWASVKKKGVLTVGTEGTYEPFTFHDKKTDKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  + ++  +        +        F  L +K+ D+++     T          F 
Sbjct: 61  DVEVIQEVAKRLGLKAD---FKETQWDSMFAGLNAKRFDVVANQVGKTG---RENQYDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +  K   I+  + + G +   Q+ T+    LA    A          E +
Sbjct: 115 DKYTTSNAVVVTKKDSTIAKEADVKGKT-AAQSLTSNYNKLAKEAGAK-----IEGVEGM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R D    D  A+     T+   +  +       +     A  +G  E   
Sbjct: 169 AQSLQLIQQGRADLTYNDKLAVLNYLKTSGNKNVKIAFEAGQPQQTY-FAFRKGSGELVT 227

Query: 240 IVSWTHYAMVT 250
            V+     M  
Sbjct: 228 HVNKALKEMKE 238


>gi|163841374|ref|YP_001625779.1| ABC transporter amino acid-binding protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954850|gb|ABY24365.1| ABC transporter amino acid-binding protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 308

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 81/276 (29%), Gaps = 41/276 (14%)

Query: 6   FVSILCLIILFFTSFSTNASILGD----------------------------IKKRGFLK 37
            ++IL +  L  +  +  +  L                              I+ RG L 
Sbjct: 11  MLAILAVGALALSGCTYESEKLDRPASGATAAPFDLDSVKTNAVLTAQLPESIRNRGTLI 70

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G NT       + A+G   G+D++   A++  +                   AL   + 
Sbjct: 71  VGSNTEYPPAEFLDASGKPTGYDIEMITAIAKKLGLKTEA---QSAEFTAILPALGP-KY 126

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+   +   T  R     +             +         ++ + G SI VQ GTT E
Sbjct: 127 DVGISSFTVTPER--LNNVNMVSFLNVGTTWAVQKGNPKKVDLNNICGLSIGVQTGTTQE 184

Query: 158 L-----TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
                   A   +      + +  +   +I         DA   D           +   
Sbjct: 185 DPDLSGRSAKCKEDGKAPINIVTLKNQTDITTRLIGGTLDAMAADSPITGYAITQTNGKI 244

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           E   L D   ++P A A+ + DT +  ++     A+
Sbjct: 245 E--RLTDAYDQAPQAIAVAKSDTTFAELIKKALDAL 278


>gi|150377102|ref|YP_001313698.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150031649|gb|ABR63765.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 276

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 86/264 (32%), Gaps = 21/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58
           M K     I  L +    + S +A+ L   IK  G +             V     + KG
Sbjct: 1   MNKH----IAALTVACLAATSASAAGLPERIKTAGKVVAANQPNYPPMEYVDPATNELKG 56

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D   AL+  +    + +++  +  ++   +L + ++D++         R     L F
Sbjct: 57  VDIDLGLALAKELG---TTVEWTNIGFEQMISSLTTGRVDLIHSGMSDLPKR--RETLDF 111

Query: 119 RPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY----- 171
                  G  F     +K    +++   G ++ +   T+     A +  A+         
Sbjct: 112 VD-YMKSGAQFYTSFGRKDEFKTLTDFCGKTVGMSRRTSFPDETAKWSAANCEAKGLGAI 170

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +  E   +  A  +  R DA       L  L         + ++ +  +         
Sbjct: 171 KVVGTEGSADARAQLKQGRLDAAVQGSETLPYLMDLEKD--TYAVVGEPFTTVYQGIGFA 228

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D E  +  +    A++ + E  
Sbjct: 229 KKDAELRDAYAAALKALMQSGEYK 252


>gi|321312474|ref|YP_004204761.1| sulfur containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis BSn5]
 gi|320018748|gb|ADV93734.1| sulfur containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis BSn5]
          Length = 269

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 5/200 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   V +L +  L     S   +      +   +  G  T     A +   GD  G+D+
Sbjct: 3   KRKGLVLLLSVFALLGGGCSQTNNKTDP--QAQTVIVGTGTDFPNIAFLDEKGDLTGYDI 60

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A+   +       ++  ++      +L +K+ID+++ N      RE        P 
Sbjct: 61  EVMKAIDKEL--PQYTFEFKTMDFSNLLTSLGNKKIDVIAHNMAKNKEREKRFLYHKVPY 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VE 180
            Y      +      I ++  L G ++ V A + T   + +Y K H    H     +   
Sbjct: 119 NYSPMYITVKEDNHKIHTLKDLHGKTVIVGATSNTADYITNYNKTHGSPIHLRYAGQGSN 178

Query: 181 EIDAAYRAHRCDAYTGDISA 200
           +        R DA      A
Sbjct: 179 DTANQIETGRADATIATPFA 198


>gi|238020539|ref|ZP_04600965.1| hypothetical protein GCWU000324_00425 [Kingella oralis ATCC 51147]
 gi|237867519|gb|EEP68525.1| hypothetical protein GCWU000324_00425 [Kingella oralis ATCC 51147]
          Length = 281

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 11/198 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + +   S++  I  +G +  G       F+    +G   G+DV+  RA++  +    
Sbjct: 36  AAPAANPQGSLIERINNKGTITVGTEGTYAPFSYHDKDGKLTGYDVEVTRAVADKLG--- 92

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+++           L++ + D+++     T   E            + G   ++ K  
Sbjct: 93  IKVEFKETQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSEPYSWSGAVLVVRKDD 151

Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I S + + G    V+   +      +  K        +  + + +        R DA 
Sbjct: 152 DKIKSPADIKG----VKTAQSLTSNFGEKAKEAG--AELVPVDGLAQSLTLIEQKRADAT 205

Query: 195 TGDISALYALKLTNDRPS 212
             D  A+      N   +
Sbjct: 206 LNDELAVLDYLKKNSNAN 223


>gi|218662937|ref|ZP_03518867.1| putative substrate-binding component of ABC transporter [Rhizobium
           etli IE4771]
          Length = 171

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 4/145 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   F   ++ L+ +   S       S L ++  RG L  G  +    +     +   +G
Sbjct: 1   MTISFRTGVISLVAVALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSEDDKLQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  R ++ A+F DP KI+Y+  ++  R   + + ++DI  +    T  R  +  +AF
Sbjct: 61  FDVDMGRIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQL 143
               Y +G G ++      +  + L
Sbjct: 119 TIPYYREGVGLMLKADGKYADYAAL 143


>gi|213650566|ref|ZP_03380619.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 177

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 18/190 (9%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + +
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162

Query: 190 RCDAYTGDIS 199
           R  A      
Sbjct: 163 RLRACLAMSP 172


>gi|303256624|ref|ZP_07342638.1| cyclohexadienyl dehydratase [Burkholderiales bacterium 1_1_47]
 gi|302860115|gb|EFL83192.1| cyclohexadienyl dehydratase [Burkholderiales bacterium 1_1_47]
          Length = 288

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 80/249 (32%), Gaps = 13/249 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M       SIL L +   T+       A  L  IK  G L  G        + +    G 
Sbjct: 27  MKHGKLVTSILVLSLAAVTAAFASMAEARSLEQIKASGELLVGSTGDYKPMSYLNKETGK 86

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++GFD +   +L+  +      ++Y+P   K       + + D+       T  R+  + 
Sbjct: 87  YEGFDAEMAESLAKYLGVK---LKYVPTTWKTLQADTMADKFDVAMSGITVTDARKKVMT 143

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           ++   +T+        +K      ++ ++  ++ V            + K    K   ++
Sbjct: 144 MSDGYLTFGKTILVTKNKAGQFKELNDVNQPTVRVMYNPGGTN--EKFAKEMTPKAQLMM 201

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGD 234
            E   EI       + D    +   + A +   D P     L D           + QG 
Sbjct: 202 HEHNAEIPGLVGEGKADVMITET--MEARRYAKDNPKIAAPLVDKPFTENHFGVLMKQGY 259

Query: 235 TEWYNIVSW 243
            +    V+ 
Sbjct: 260 PKLEAAVND 268


>gi|306996359|gb|ADN22849.1| collagen-binding protein [Lactobacillus reuteri]
          Length = 263

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 18/215 (8%)

Query: 1   MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K   ++I  L +          + ++++  ++  +G L  G+      ++    N 
Sbjct: 1   MKFWKKAPLTIAALTVSTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  +A++  +        ++P         L S + D++  N   T  R    
Sbjct: 60  KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPER--GK 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           I+     I S+  + G  I    GT     +         K    
Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVV------KKYKGSLT 168

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                       +  R         A YA    N 
Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203


>gi|77408470|ref|ZP_00785208.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae COH1]
 gi|77172912|gb|EAO76043.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus agalactiae COH1]
          Length = 285

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   + ++ L  +   + S   S       +IKK G LK      L   +    +   
Sbjct: 1   MKKTILLGLVGLSAMTLAACSNGQSNKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+++D  +   +       K++++ +   E F ++ S ++D+   N D T  R      
Sbjct: 61  TGYEIDMMK---AIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPER--LKKY 115

Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F     +   G I+        +   LS        G      +    K    +     
Sbjct: 116 NFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMK-IAKQQGAEPVIYD 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232
               +         R D    D     +    +T   P   V + D+  + +     + +
Sbjct: 175 NVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSK 234

Query: 233 GDTEWYNIVSWTHYAM 248
            D      +      M
Sbjct: 235 KDKSLKTKIDAAIKDM 250


>gi|126699793|ref|YP_001088690.1| amino-acid ABC transporter substrate-binding protein [Clostridium
           difficile 630]
 gi|255101315|ref|ZP_05330292.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-63q42]
 gi|255307191|ref|ZP_05351362.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile ATCC 43255]
 gi|115251230|emb|CAJ69061.1| ABC-type transport system,cystine/aminoacid-family extracellular
           solute-binding protein [Clostridium difficile]
          Length = 267

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 89/263 (33%), Gaps = 12/263 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L+     +  ++ +     +++  ++   +     FA    +   KGF+
Sbjct: 1   MKKLKLIIMFALVSALLVTGCSSGNNKNK-EEQKVIRVATSGTYYPFAFKDKD-KLKGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF    +         ++++  +    F  L++ + D +S     T  RE     AF  
Sbjct: 59  VDFWDEFAKRTNCK---VEWVLTDFSGLFGLLEADKADAVSAQLTATPEREK--KYAFSD 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   I+ +    I S+  L G  + V  G      L + +    +K        +
Sbjct: 114 AYNYSGTNIIVREDDTSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKIVNYSSATL 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237
           +         R DA       + AL    ++     ++   I     + A+ + +   +W
Sbjct: 174 KGNYQDLEMGRLDAVVAQD--VEALIAIKEQKLNLKMIEPPIQFGACSFALQKNEKGEKW 231

Query: 238 YNIVSWTHYAMVTAEELGITQKN 260
              ++     M     L    +N
Sbjct: 232 TKEINEVIEEMYKDGTLTKISEN 254


>gi|329117484|ref|ZP_08246201.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
 gi|326907889|gb|EGE54803.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
          Length = 275

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 76/248 (30%), Gaps = 10/248 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   VS L L  +   +   N       KK   +          F+    +G   G+D+
Sbjct: 4   KKIVAVSALGLATVSLLAACANDKNANSDKKE-KVNFATVGTTAPFSYQ-KDGKLTGYDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A+      +  K+ +        F  L + +  + + N  +T  R  +    F   
Sbjct: 62  EVAKAVFKD--SEDYKVNFKKTEWSSIFTGLDASKFQMGANNISYTKER--ANKYLFSYP 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE- 180
           T       ++ K   I S + + G S  V  GTTT   L DY K    K   + +     
Sbjct: 118 TGTTPSVLVVPKDSNIKSYADIKGHSTQVVQGTTTAAQLEDYKKKEGDKSLNLKYTNENI 177

Query: 181 -EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238
            +I +     + D    D        +          +P      P       Q   E  
Sbjct: 178 TQILSNLSQGKADFKIFDAP-TVNSIIKEQGLDNLKTIPLESKDQPYIYFIFGQDQEELQ 236

Query: 239 NIVSWTHY 246
           + V+    
Sbjct: 237 SFVNKRLK 244


>gi|218461456|ref|ZP_03501547.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli Kim 5]
          Length = 231

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 18/225 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            V  + +++   +     A      ++   ++  +      F  + AN   +GFD+D   
Sbjct: 1   MVGGVAVVLAAVSPLPVAA------QEPMPMRVAVEGAFPPFNYLDANNKLQGFDIDIAN 54

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL         + Q++     +    L + + D +  +   +L R     +AF    Y  
Sbjct: 55  ALCE---TGKFECQFIIEKWDDMIPDLIAGKYDAIISSMSMSLER--RQKVAFTEKYYNS 109

Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              FI  K   IS  S + LSG  + V + T  E     ++          VF    E+ 
Sbjct: 110 PSVFIARKDSPISDVSPAALSGKKLGVTSSTAQESYANHFYP----DMKKTVFRSSPELY 165

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLA 227
                 R D    D  A+Y         +      PD++  +   
Sbjct: 166 KGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFG 210


>gi|85059073|ref|YP_454775.1| arginine ABC transporter periplasmic component [Sodalis
           glossinidius str. 'morsitans']
 gi|84779593|dbj|BAE74370.1| arginine ABC transporter periplasmic component [Sodalis
           glossinidius str. 'morsitans']
          Length = 243

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 87/247 (35%), Gaps = 25/247 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L  +    ++                ++         F  V A+   +GFD
Sbjct: 1   MNKTVLATLLAALSTGVSAAE-------------TVRFATEATYAPFEFVGADNKIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    ++  +          +L+ ++ D +    D T   +    +AF  
Sbjct: 48  IDLANALCKQM---QAECTFTNQAFDSLIPSLRFRRFDAVISGMDITP--DRLKQVAFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   F+  K    + ++ L+G  + +Q G+T +  L D     +++   + ++  +
Sbjct: 103 PYYENSAIFVAQKG-KFTDMASLAGKRVGMQNGSTHQKYLMD----KHLEITAVPYDSYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D+  GD + +    + +   +     +       + L  A+ Q +T   
Sbjct: 158 NAILDLKNGRLDSVFGDTAVVNEWLMKDAGLATVGDKVTDKAYFGTGLGIAVRQNNTALL 217

Query: 239 NIVSWTH 245
           +  +   
Sbjct: 218 DKFNQAL 224


>gi|47094853|ref|ZP_00232467.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|254898981|ref|ZP_05258905.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes J0161]
 gi|254911531|ref|ZP_05261543.1| glutamine ABC transporter [Listeria monocytogenes J2818]
 gi|254935857|ref|ZP_05267554.1| glutamine ABC transporter [Listeria monocytogenes F6900]
 gi|47016735|gb|EAL07654.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258608445|gb|EEW21053.1| glutamine ABC transporter [Listeria monocytogenes F6900]
 gi|293589477|gb|EFF97811.1| glutamine ABC transporter [Listeria monocytogenes J2818]
          Length = 480

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 94/297 (31%), Gaps = 22/297 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+     T    NA    +         G +T    F   + +G+ 
Sbjct: 1   MKKFSRFILMMAIACVAAFILTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT                +  +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ +    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +            + A  E     KN    +    N   + F+GI KSS      GL
Sbjct: 225 QELLEKFNAGLVNIKASGEYEKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281


>gi|282863108|ref|ZP_06272168.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
 gi|282562090|gb|EFB67632.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
          Length = 273

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 84/250 (33%), Gaps = 18/250 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIK------KRGFLKCGINTGLVGFAEVKANGDWKG 58
                  + ++  T  S++    G  K      ++  L    +     F   + +G   G
Sbjct: 10  LTACAAVVGLVLTTGCSSSGDGPGQAKGGVDVVEKDKLTTCTHLPYPPFQSEQ-DGKVVG 68

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV     ++  +  +  KI   P    +    L S + D+ +     T  R+    + F
Sbjct: 69  FDVALVDLVAKNLDVE-QKILDTPFENFKTGAFLNSGECDLAAAGMTITDERKK--NVDF 125

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVF 176
               +   Q  +  KK G+++++ +    +    QA TT E        A    + P+ F
Sbjct: 126 SVPYFDATQALLTTKKSGVTALADVKSKKLKLGAQAETTGESY------ATGQGFDPVAF 179

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E  + +    R  + DA   D   +              +  +I +      ++ +G+TE
Sbjct: 180 ESSDAVLNGLRTGQVDAVVIDYPVVQGWLKDKANADAFALGENIETGEQYGFSVKKGNTE 239

Query: 237 WYNIVSWTHY 246
               +     
Sbjct: 240 LKAAIDKAIT 249


>gi|254250960|ref|ZP_04944278.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124893569|gb|EAY67449.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 262

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 22/248 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              ++ L   +L   +   +A           L+ G+      F     NG+ +GFD+D 
Sbjct: 6   SLKLAFLLACVLGSGAALADAQT---------LRFGLEAQYPPFESKAPNGELQGFDIDV 56

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A+           ++L  +      ALQ ++ D ++   + T  R     + F  I Y
Sbjct: 57  GNAVCQ---TAKLTCKWLETSFDGLIPALQGRKFDAINSAMNATEQR--RQAIDFTTIIY 111

Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                 I     G + +   L G  + V   +  E     +++   +    + ++   + 
Sbjct: 112 RVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVS--VVAYQDQNQA 169

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEW 237
            A   A R DA      A     L+         +   +         +A  + +GD   
Sbjct: 170 YADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRKGDDAL 229

Query: 238 YNIVSWTH 245
              +    
Sbjct: 230 KAKLDAAI 237


>gi|330811616|ref|YP_004356078.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379724|gb|AEA71074.1| Putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 284

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 82/270 (30%), Gaps = 16/270 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L    +   + S  A+ L  IK    ++ G       FA  + +G+  G   +  + + 
Sbjct: 15  LLLTCAVLGLAGSVQAATLDTIKSNSSIRIGYANET-PFAFTETDGNVTGESPEIAKIIF 73

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           + +     ++  +          L++ + D+++     T  R     + F    Y     
Sbjct: 74  AKMG--IKQVNGVLTEWGSLIPGLRAGRFDVIAAGMYITPAR--CKQVLFTDPQYQLPDA 129

Query: 129 FIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            ++ K     + S   ++       A     + LA    +       +          A 
Sbjct: 130 LLVAKGNPKKLHSYEDIAKQPDVKLAIMAGTVNLAYARDSGVKDDQILQVPDTTAQLQAV 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHV--ILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           RA R DA  G    +  L        E +     D       A A    D +  + V+  
Sbjct: 190 RAGRADAAVGTQLTMKGLASKGGDKVEAMTEFKDDPSHIGYGALAFRPEDKDLRDAVNAE 249

Query: 245 HYAMVTAEE-------LGITQKNINQVSKD 267
               + +EE        G  + N+   +  
Sbjct: 250 LKKWLGSEEHLKTVAPFGFDKSNVTSKTAA 279


>gi|242372075|ref|ZP_04817649.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis M23864:W1]
 gi|242350187|gb|EES41788.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus epidermidis M23864:W1]
          Length = 263

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 15/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +  F  I  + +L     + ++S        K    L+ G       F          
Sbjct: 1   MKRLLFCVIALVFVLAACGNNDSSSNKDGKSSSKDDNTLRVGTEGTYAPFTFHNKKDQLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+D  +A++ A   +  K+++   +    F  L + + D+++        RE      
Sbjct: 61  GYDIDVIKAVAKA---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK-- 115

Query: 118 FRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     +     ++   +K I S + + G  +  Q  T+    LA    A          
Sbjct: 116 FSDPYTYSSAVLVVRDNEKDIKSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DITKV 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           +   +      + R D    D  +    K       
Sbjct: 170 DGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 205


>gi|209521582|ref|ZP_03270281.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
 gi|209497993|gb|EDZ98149.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia sp. H160]
          Length = 264

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 76/219 (34%), Gaps = 13/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G+      F      G+ +GFD+D   A+ + +    +K  ++  +      AL+
Sbjct: 30  KEVRFGVEASYAPFESKSPAGELQGFDIDVGNAVCAKL---KAKCVWVENSFDGLIPALE 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           +++   ++ +   T  R     + F    Y      I  K  G+  + + L G  + V  
Sbjct: 87  ARKFSAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLQPTPASLKGKHVGVLQ 144

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E      +    +    + ++  ++I A   + R DA   D  A     L   + +
Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDASFQDAEAASKGFLKKPQGA 202

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246
                   +S   L        + + D    + ++    
Sbjct: 203 GFEFAGPAVSDDKLLGAGVGYGVRKNDKALKDALNGALK 241


>gi|326693347|ref|ZP_08230352.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 482

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 18/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +  + L+         +A+      ++       +     F     NG + G D
Sbjct: 4   MKRYLLIVAIALLSFVGFGLDAHAA------EKPNYVITTDATYPPFDFQDKNGQYTGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  + ++     +       P++      ++ S Q D +      T  R+      F  
Sbjct: 58  QEILKTIAER---EGFTYTLKPMSFNSATQSVASDQADGVIAGMSITDERKKV--FDFGT 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G G+ + K   I S+  L G ++ ++ GT+         K +  K   + F   +
Sbjct: 113 PYYRSGIGWAVKKGSNIKSLKDLKGKTVAIKTGTSGADYALSIQKKYGFK--VVYFNDSD 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWY 238
            +          A  GD+  +   +      +   ++             A+ +G     
Sbjct: 171 TLYNDVINDNSQATFGDLPVI---QYAVKNGTALKVMNPKSPIQAGWYGFAVKKGKNAQL 227

Query: 239 NIVSWTHYAMV 249
            +     +A +
Sbjct: 228 LVDFNKGFAAI 238


>gi|45359195|ref|NP_988752.1| glutamate-binding protein [Methanococcus maripaludis S2]
 gi|45048070|emb|CAF31188.1| Solute-binding protein/glutamate receptor:Bacterial extracellular
           solute-binding protein, family 3 [Methanococcus
           maripaludis S2]
          Length = 240

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 94/246 (38%), Gaps = 18/246 (7%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M     F  +L +      S  +N + L D    G L  G+   +   A  + NG+ KG+
Sbjct: 1   MKNAVIFSVLLVITSCACISSDSNTTTLKD----GVLTVGVFKYVPP-AVYEENGELKGY 55

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+    ++  +     K++Y      +   A+ + ++D    +   T  RE    ++F 
Sbjct: 56  EVELISEIAERM---DLKVEYKEYMFSDLLNAVANNEVDCAISDIAVTPEREKI--VSFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     ++ K   I  ++ + G  + V AGT  +   ++  K+  + +    +   
Sbjct: 111 RAYSKTDIILVVPKDSDIEKLTDIIGQKVGVTAGTIDDDKSSELLKS--IDFQVCRYNNH 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E+  A  +   DA   + +   +++ ++        L + I+      A+ + + E   
Sbjct: 169 DELYDALESGNVDAIISEENNFESVQNSSIN-----YLDEPIATVYCGIAVNKDNKELRL 223

Query: 240 IVSWTH 245
            ++   
Sbjct: 224 KINDII 229


>gi|86147776|ref|ZP_01066083.1| hypothetical amino acid ABC transporter, periplasmic
           aminoacid-binding protein [Vibrio sp. MED222]
 gi|85834414|gb|EAQ52565.1| hypothetical amino acid ABC transporter, periplasmic
           aminoacid-binding protein [Vibrio sp. MED222]
          Length = 260

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 21/248 (8%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   ++   +     F    ++G   GFD++   AL      D     ++  +      +
Sbjct: 23  QAKEIRLASDFTYPPFNYKNSDGVPVGFDIEIADALCEQAKLD---CTWVSQSWDSLIPS 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +++ D++  +   T  R+    + F    Y     F+  K    S     L+G +I V
Sbjct: 80  LLARKSDVIMASMRITEERKR--KILFTDKYYQTPAVFVAAKSAEFSVDEAGLTGKTIGV 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GT  +  + D F       +   +   +E+    +  R D   G+   L    L    
Sbjct: 138 QQGTIHDRYVTDKF---GSVANIKRYTGQDEVYLDLQNGRLDLTFGNSDQLSLAFLDKKE 194

Query: 211 PSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
                     ++         A A+ + D++     +         EE+       ++++
Sbjct: 195 GEGFEFKGKAVTDKAYIGEGTALALRKQDSKLAKQFNAAI------EEIRANGT-YDKIA 247

Query: 266 KDTTNPDV 273
                 D+
Sbjct: 248 AKYFTFDI 255


>gi|229522564|ref|ZP_04411980.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
 gi|229340549|gb|EEO05555.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
          Length = 278

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 84/243 (34%), Gaps = 20/243 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G      K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137

Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           K  +G S +   +     I  + G  T     + F         + F+   +        
Sbjct: 138 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              A            + +      +   + +SK   A A+  G+ +         +   
Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEED-----KKAFFDQW 247

Query: 250 TAE 252
            AE
Sbjct: 248 IAE 250


>gi|170700296|ref|ZP_02891309.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170134783|gb|EDT03098.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 317

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 77/232 (33%), Gaps = 11/232 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77
             +   S L  I +R  +  G+      F  +        GF+VD    ++  +  D   
Sbjct: 62  GVARADSTLDRIHQRHKISIGVILSGPPFGSLDPATQKQVGFNVDLANDVAKRLGVDAE- 120

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
               P+    R   LQ  ++D L  N + T  R   L  A  P     G   I     GI
Sbjct: 121 --LTPVQPSNRVQFLQQGKVDALIANMELTTERAEILSYAPTPF-ESIGGALIARTDSGI 177

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S + L G  +CV  G+     LA  + A         F    E   A R + C A    
Sbjct: 178 KSWADLRGKPVCVSQGSNYTKPLAAEYGA-----QVKAFRGQPESLLALRGNNCVAAVHV 232

Query: 198 ISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              L  L   N    ++   L   +  SP    + +G+T+  + +       
Sbjct: 233 APTLRMLVARNPDWKDYTTPLSTDLIPSPAVIWVRKGETDTQSALDRIVQDW 284


>gi|153801946|ref|ZP_01956532.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|124122521|gb|EAY41264.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
          Length = 278

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 20/247 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G      K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137

Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           K  +G S +   +     I  + G  T     + F         + F+   +        
Sbjct: 138 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244
              A            + +      +   + +SK   A A+  G+ +        I   T
Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRT 252

Query: 245 HYAMVTA 251
               + A
Sbjct: 253 ADGWLQA 259


>gi|152996348|ref|YP_001341183.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Marinomonas sp. MWYL1]
 gi|150837272|gb|ABR71248.1| Ectoine/hydroxyEctoine ABC transporter solute-binding protein
           [Marinomonas sp. MWYL1]
          Length = 282

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 84/265 (31%), Gaps = 19/265 (7%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    ++  L    +   S S  A+ L  IK  G +  G+    V +     +G+  G
Sbjct: 1   MKKTLGKYLISLMSFTVALFSVSVAATTLDKIKDEGTVTIGV-ANEVPYGYTTPDGEPAG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
                   + + +  D   ++ +          L++ + D+++     T  R     + F
Sbjct: 60  EAPSIAVKVLNDLGVD--NVKVVVTEFGSLIPGLRAGRFDVIAAGMYITPKR--CKQILF 115

Query: 119 RPITYFDGQGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              TY  G+GF+      K+             + V +G+       DY          +
Sbjct: 116 SNPTYSIGEGFLVQNGNPKELNGYDSIDSKAVKLGVMSGSVEYGYARDYGIDL---SKVV 172

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLT-----NDRPSEHVILPDIISKSPLAPA 229
                    AA ++ R DA  G    + +L          +P   +I+     K      
Sbjct: 173 TLPDYPSGVAALKSGRIDALAGTSLTMASLAQKDDRVELAQPFTPLIIKGKSVKGYGGFG 232

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254
               DT   +  +    + +  +E 
Sbjct: 233 FRPADTALRDAFNAELKSFIDTKEH 257


>gi|218132831|ref|ZP_03461635.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991704|gb|EEC57708.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC
           43243]
          Length = 493

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 14/222 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G +     +     NG++ GFD+D  + + +    +  K    P++   + + L S
Sbjct: 23  TFTVGFDAEFPPYGYKDDNGEYVGFDLDLAQEVCNRQGWNLVK---QPIDWDSKDMELNS 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             I  +                 +      + Q  ++     + +++ L+G  + VQA +
Sbjct: 80  GTISCIWNGFTMDG---RVDDYTWSSAYIDNSQVVVVKSDSSVKTLADLAGRVMVVQADS 136

Query: 155 TTELTLADYFKAHNMKY------HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           +              K                       A   DA   D     A     
Sbjct: 137 SALAAFTGEEAEDKNKELCASFASLQQVSDYNSAFMNLEAGSVDAICMD--IGVASYEIK 194

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            R  +  +L + +S         +G+T+  + V  T   M+ 
Sbjct: 195 ARSGKFRMLDEHVSSEQYGIGFKKGNTQLRDEVQETLNEMLA 236


>gi|256848280|ref|ZP_05553723.1| amino acid ABC transporter [Lactobacillus coleohominis 101-4-CHN]
 gi|256714878|gb|EEU29856.1| amino acid ABC transporter [Lactobacillus coleohominis 101-4-CHN]
          Length = 277

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 77/255 (30%), Gaps = 20/255 (7%)

Query: 2   YKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
            K    ++   + L  +     +   + +  IK +  L  G +     +           
Sbjct: 7   KKSVLAALTIMIGLSTVLAGCGAKKDNSVQSIKNKKELVVGTSADFAPYDFQIMKNGKQQ 66

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV     ++  +     K++++ +        LQ+K++DI+     +T  R     
Sbjct: 67  IVGYDVLLAYEIAKDMG--IKKVKFVNMAFPSLINELQNKKVDIVMAGMAYTPQRAKV-- 122

Query: 116 LAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           ++F    +  GQ  +     K   +++  L GA++  Q  +  E                
Sbjct: 123 VSFSESYHDGGQVLLVSPKNKDKYANIGALKGATLGAQQSSEQEK-----IGKKLKGVKL 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAI 230
           +       +    R    D          A    +        ++       +S    A+
Sbjct: 178 VTESSNNTLTQELRNGSIDGLITGEDTAEAYAKEHPDKYAVANNISFKYNKKESATRVAV 237

Query: 231 IQGDTEWYNIVSWTH 245
            + D      ++ T 
Sbjct: 238 RKDDKALLKKINATI 252


>gi|167838419|ref|ZP_02465278.1| cyclohexadienyl dehydratase [Burkholderia thailandensis MSMB43]
          Length = 261

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 76/266 (28%), Gaps = 18/266 (6%)

Query: 1   MYKDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K       C  +         +  AS L D+  RG L+         +   + +G ++
Sbjct: 3   MKKTLLALACCAGVAHAQTLPQPAAPASRLDDVLARGALRVCTTGDYKPYTYRREDGAFE 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D   +L+ ++      ++         F+A    + DI       TL R+      
Sbjct: 63  GIDIDMAASLAKSLGVKTEFVKTTWPTLISDFVA----KCDIAVGGISTTLERQK--RAF 116

Query: 118 FRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           F      DG+  I+           +        + V  G T E     +F         
Sbjct: 117 FTQPYVTDGKTPIVRCADVERYQTIAQIDQPQTRVIVNPGGTNERFAKQHF----THAKI 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            VF     I     A   D    D S    L+   +     V           A  + +G
Sbjct: 173 AVFPDNVTIFKQILAGSADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRG 231

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D  +   V    +      EL     
Sbjct: 232 DVVFQQYVDQWLHLARETGELQAISD 257


>gi|88855897|ref|ZP_01130559.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [marine actinobacterium PHSC20C1]
 gi|88814764|gb|EAR24624.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [marine actinobacterium PHSC20C1]
          Length = 275

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 79/246 (32%), Gaps = 17/246 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKANGDWKGF 59
            V+ L L +   ++ + +       +        G   C ++     F     +    GF
Sbjct: 19  IVAGLFLSVSACSTSAADEPTKSVAEAAFTTVEPGKFICAMSGEYRPFNFFDESNTLVGF 78

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C A+++ +  +   +             L S + D +  +   T  R+ +  + F 
Sbjct: 79  DVDICGAIANELGLEAEPVTGAFTT---LVAGLASNRFDAIIGSMTATDERKET--VDFT 133

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G    +     I+SV+ LS +++ V  GTT E       +  +       ++  
Sbjct: 134 ENYYETGASLFVRNDATINSVADLSDSTLGVALGTTFETY----ARTLDGVADITTYQAT 189

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      A R D             L      E   + D++     A  + Q + E   
Sbjct: 190 VDALRDLAAGRVDGVI--AQGFIGKFLAKSANLEIKSVGDVLLPDTAAIPVNQDNPELRK 247

Query: 240 IVSWTH 245
            +    
Sbjct: 248 AIDEAL 253


>gi|15601790|ref|NP_233421.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar eltor str. N16961]
 gi|121587147|ref|ZP_01676922.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121726631|ref|ZP_01679867.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|147671730|ref|YP_001215043.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|153817632|ref|ZP_01970299.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|153821745|ref|ZP_01974412.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|227812603|ref|YP_002812613.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|229505828|ref|ZP_04395337.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229510317|ref|ZP_04399797.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229517551|ref|ZP_04406996.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229605361|ref|YP_002876065.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254850198|ref|ZP_05239548.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746230|ref|ZP_05420177.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262158720|ref|ZP_06029834.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|262168872|ref|ZP_06036566.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
 gi|298499806|ref|ZP_07009612.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9658482|gb|AAF96933.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548586|gb|EAX58638.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121630937|gb|EAX63317.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|126511788|gb|EAZ74382.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|126520741|gb|EAZ77964.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|146314113|gb|ABQ18653.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|227011745|gb|ACP07956.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|227015683|gb|ACP11892.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|229345587|gb|EEO10560.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229352762|gb|EEO17702.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229356179|gb|EEO21097.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229371847|gb|ACQ62269.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254845903|gb|EET24317.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735984|gb|EET91382.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262022571|gb|EEY41278.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
 gi|262029600|gb|EEY48250.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|297541787|gb|EFH77838.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 278

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 12/243 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G     +K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           K               V+             +    K   + F+   +           A
Sbjct: 138 KLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAM 248
                       + +      +   + +SK   A A+  G+ +        I   T    
Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGW 256

Query: 249 VTA 251
           + A
Sbjct: 257 LQA 259


>gi|319779861|ref|YP_004139337.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317165749|gb|ADV09287.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 265

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 65/213 (30%), Gaps = 10/213 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G       F     +G ++GF+VD     +  I           L  +  F A  SK
Sbjct: 30  LNVGAYPTNPPFEFKNESGTFEGFEVDIVNEAAKRIG---MTTDIADLGFQALFAATTSK 86

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID+   +   T  R      +F    Y    G        I + + L G  + V +G+T
Sbjct: 87  RIDVAISSITITAER--LKSQSFTQPYYDSDMGIATKADSPIKAEADLKGKIVGVLSGST 144

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E  +  + +A         ++  + +     A R DA   DI  +              
Sbjct: 145 GETWVKAHQEADGFS-DVKGYDTQQNLLLDLSAGRVDAAVSDIPGMEYSFTKMKDLVVKE 203

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +            + +        ++    AM
Sbjct: 204 RIKTG---EQYGLMMTKDHP-LLGKLNDALSAM 232


>gi|166365426|ref|YP_001657699.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166087799|dbj|BAG02507.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 503

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 14/220 (6%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           +         F   +  G   GFD+D  RA+          I +  L       ALQ++ 
Sbjct: 41  RVATEATFPPFEFQQG-GQLTGFDIDLMRAIGEEA---DLNIDFRNLPFDGIIPALQART 96

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTT 155
           ++        T  R  +  ++F    +  G    + +    I +   L G  I VQ GTT
Sbjct: 97  VEAAISGMTITAER--AQAISFSRPYFRAGLAIAVREDNKTIKNFEDLKGKRIAVQIGTT 154

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
             L       A         F+            R +A   D        +         
Sbjct: 155 GALEATKIPGA-----TVSQFDSAALALQELINGRVEAVVNDKPVTL-YAIKQAGLRGVK 208

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++ +++++     A+ +    +  +++     ++ +    
Sbjct: 209 VVGELLTEEFYGIALPKNSP-YLQLINDALGRVIESGRYD 247


>gi|260222554|emb|CBA32231.1| hypothetical protein Csp_D31100 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 265

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 79/253 (31%), Gaps = 10/253 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   L    L   S     + L DI K   LK  + T    +  V  +    G D+D
Sbjct: 7   KRTFALALATGALLAASGVQAQTALDDILKAKVLKVAVQTDSAPYGFVGTDLKPIGLDID 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   +         + + +  R  ALQ+K+ D++         RE    + F    
Sbjct: 67  MANLIGKKLGVPVEL---VVVVSASRIPALQTKKADLVIATLGKNPDREKV--IDFSSAY 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
               Q     K   + S + L+G S+ V  G   +  L               FE     
Sbjct: 122 SPFFQAVFGPKNIPVKSFADLAGKSVGVTRGAMEDQELGKVAP---TGVDTKRFEDNNAT 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            AA+ A +        S   A  +    P        ++  SP    I +G+ +    V+
Sbjct: 179 IAAFTAGQVQFVALGAS--VAGNMMTKNPQLSAEYKLLLKDSPNFIGIAKGEDKLKAKVN 236

Query: 243 WTHYAMVTAEELG 255
                   + EL 
Sbjct: 237 EIIADAKKSGELE 249


>gi|254461612|ref|ZP_05075028.1| cyclohexadienyl dehydratase [Rhodobacterales bacterium HTCC2083]
 gi|206678201|gb|EDZ42688.1| cyclohexadienyl dehydratase [Rhodobacteraceae bacterium HTCC2083]
          Length = 258

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 13/245 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60
           +K   V   C+  L     S   S L +I   G LK G        +        + GFD
Sbjct: 4   FKKLGVVAACMTALMGAPVSAQ-SALNEILSGGVLKVGTTGDWNPMSVRDPATNSYVGFD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L + +  +   ++++P + K     + +    + + +   +  R  + G +   
Sbjct: 63  IDVMTQLGADLGVE---VEFVPTDWKTLVNGVVAGNYHM-TGSASISPARLKAAGYSNSY 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFER 178
           I+          K    ++   ++ A + V     TT E  + D+F         +V E 
Sbjct: 119 ISVEMLPFTTEDKADRFTTWDSINNADVTVSTTLGTTFEKLVRDWFP----NAKIVVVEA 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                    + R D +         L        + + +    + +P+A  + Q D  W 
Sbjct: 175 PARGFQEVLSGRADVFITSNIEGSTLLTKFPNLRQ-IGVEAPRAPTPIAMLLPQTDQVWI 233

Query: 239 NIVSW 243
           N V+ 
Sbjct: 234 NYVNS 238


>gi|254284660|ref|ZP_04959627.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|262191875|ref|ZP_06050044.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
 gi|150425445|gb|EDN17221.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|262032240|gb|EEY50809.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
          Length = 278

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 12/243 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G     +K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           K               V+             +    K   + F+   +           A
Sbjct: 138 KLAEGFAKLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAM 248
                       + +      +   + +SK   A A+  G+ +        I   T    
Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGW 256

Query: 249 VTA 251
           + A
Sbjct: 257 LQA 259


>gi|145223751|ref|YP_001134429.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|315444078|ref|YP_004076957.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|145216237|gb|ABP45641.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium gilvum PYR-GCK]
 gi|315262381|gb|ADT99122.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 493

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 83/289 (28%), Gaps = 36/289 (12%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             + +   ++    +                     +T    F    A+G++ G D+D  
Sbjct: 29  LLIGLFGAVLALPGTAGAEGETY---------TVATDTTFAPFEFQDASGEFVGIDMDLI 79

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA++         +   PL       A+Q+ Q+D +      T  R+      F    + 
Sbjct: 80  RAIAED---QGFTVDIKPLGFDAALQAVQANQVDGVIAGMSITEERKKV--FDFSEPYFE 134

Query: 125 DGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            G    ++   + I+S   L G  + V+ GT                +  + F     + 
Sbjct: 135 SGIQMAVLEDNEDITSYEDLRGQRVSVKNGTQGSDFANSI--KDQYGFEVVSFADSSTMF 192

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +     A   D      L     + +    +      +    A+ +G          
Sbjct: 193 DEVKTGNSVAVFEDYPV---LLYGIAQGNGFKTVTPKEDPTGYGFAVNKGQ--------- 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSNIGEALGL 291
                  AE L      +  +       ++ Q +LG + + +     GL
Sbjct: 241 ------NAELLQKFNDGLENLKAQGRYDEILQTYLGEEAAESDDSLFGL 283


>gi|152979464|ref|YP_001345093.1| extracellular solute-binding protein [Actinobacillus succinogenes
           130Z]
 gi|150841187|gb|ABR75158.1| extracellular solute-binding protein family 3 [Actinobacillus
           succinogenes 130Z]
          Length = 239

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 28/209 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++  + L                    ++  +      F      G+  GFD
Sbjct: 1   MKK----TLVAALFLSAAFGVQAQD----------IRFAMEPSYPPFEMTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +           L+ K+ D        T  R+    + F  
Sbjct: 47  VDIANAICKEI---QANCSFQSQPFDSLIQGLKQKRFDAAISGMGITEARKK--QVLFSE 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     FI  K    +++      +I VQ GTT +  ++         Y    +   +
Sbjct: 102 PYFSSSAAFIAKKGTDFANLK-----NIGVQNGTTYQNYIS----KEKPGYQVKSYASYQ 152

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
           E     +  R DA  GDI  L  +     
Sbjct: 153 EAILDIQNGRIDAIFGDIPVLVDMIDKTP 181


>gi|315586884|gb|ADU41265.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Helicobacter pylori 35A]
          Length = 258

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +  L++ FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLF--LFLLVVSFFGGFLNASSLYERLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRTANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAMQRLI 238


>gi|293391093|ref|ZP_06635427.1| L-cystine-binding protein TcyA [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951627|gb|EFE01746.1| L-cystine-binding protein TcyA [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 259

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 21/262 (8%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K       +L  + L   + +    I   ++K   L  G       F     +G   G
Sbjct: 1   MKKSILAKTLLLTGLALGIATQAAAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+   +++  +     KIQ+        +  L +K+ D+++  T      E      +
Sbjct: 61  FDVEVIESVAQRLG---LKIQFNETQWDSMYAGLNAKRFDLIANQTS--PSPERLKKYLY 115

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +     +  +    I +   L G     Q+ T+    +A    A       IV +
Sbjct: 116 TTPYNYSTAVIVTKEGDDSIKAFEDLKGKK-AAQSLTSNYGKIAKANGA-----ELIVVD 169

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            + +        R      D  A+             + +     K P   A+++G+   
Sbjct: 170 GLAQALKLITQDRAQTVVNDQLAVLDYFKKQPNAGLKIAVK-HDEKVPSGFAVLKGEEPL 228

Query: 238 YNIVSWTHYAMVTAEELGITQK 259
              ++         EEL     
Sbjct: 229 AEKINQAL------EELRKDGT 244


>gi|121607779|ref|YP_995586.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121552419|gb|ABM56568.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 358

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 3/198 (1%)

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+ V+ C  +   I    +K++Y+ + A+     +++  +DI    T     R     +A
Sbjct: 121 GYHVELCERVLRQI-APAAKLEYMAVTAQNTLPLVRNGTLDIGCGPTTNNQAR--QQQVA 177

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY       +    GI+SV QL G ++    GTT    L    +        ++ +
Sbjct: 178 FAVTTYVSEVRMAVRADSGIASVDQLGGRTVAASTGTTAVQMLRKLERTLGAPITVLLGK 237

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E      + R DA+  D + L  +  +   P    I+   +   P+A  + + D  +
Sbjct: 238 DHAESFLLLESGRVDAFVLDDNLLAGMIASAKNPGHFRIVGQALGSEPIALLMRKDDPAF 297

Query: 238 YNIVSWTHYAMVTAEELG 255
              V      ++ + EL 
Sbjct: 298 KAAVDGVLIRLMQSGELE 315



 Score = 45.1 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 5/58 (8%), Positives = 18/58 (31%), Gaps = 4/58 (6%)

Query: 2  YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           +   ++ +  ++    +++       + L  I+  G    G+       A      +
Sbjct: 6  RRTVIIATVAALVCTAGAWAQPSGAAQTTLEKIEASGKAVLGVRESSPPMAYALGANE 63


>gi|115359511|ref|YP_776649.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria AMMD]
 gi|115284799|gb|ABI90315.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 260

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    A+G   GFDVD    +   +    +K  ++  +      
Sbjct: 23  KDWTTVRFGVDASYPPFESKDASGKVVGFDVDLGNEICRRM---NAKCVWIENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++++ D +  +   T  R+  +   F    +      +  K  G+  +   L G SI 
Sbjct: 80  ALKARKFDGVLSSMSMTPARQEQIA--FSEKLFNTPTRLVAKKGAGLMPTAESLKGKSIG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y+ A       + ++  +++ A   A R D    D        L   
Sbjct: 138 VEQGTIQETYAKTYWAAKG--VKVVPYQNQDQVYADLIAGRLDGALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           R +        I       +     + + DT+    +      M
Sbjct: 196 RGANFDFAGKDIDDPKTLGNGAGIGLRKEDTDLKAKIDSAITGM 239


>gi|329939724|ref|ZP_08289025.1| secreted protein [Streptomyces griseoaurantiacus M045]
 gi|329301294|gb|EGG45189.1| secreted protein [Streptomyces griseoaurantiacus M045]
          Length = 321

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 21/243 (8%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           DI+K G +K G +        +   G   G D D   AL   +       ++      + 
Sbjct: 62  DIRKAGVIKVGSDIAYPPVEFM-KGGKATGIDPDIAEALGKQLGVK---FEFQNGKFDQL 117

Query: 89  FLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMHKKKG-- 136
            + LQ+ +  ++    + T  R          +   G+ F    +  G   ++ K     
Sbjct: 118 VVGLQAGRTQVIMSAMNDTKDRQNGIDSDSGKKAGDGVDFVD-YFTAGTSILVQKGNPKG 176

Query: 137 ISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           I S+  L G  + +Q GTT+E           K        + F+   E     +     
Sbjct: 177 IKSLDDLCGKVVALQRGTTSEGVAKAQSKKCTKDGGKAIKLLTFDTDPEALLRLKQGASV 236

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A   D         T+    +  ++ + I   P    + + +T+  + +     A++   
Sbjct: 237 ADLNDFPVAAYNAKTSGGGKDFEVIGEQIEAGPYGIGVGKKNTQLRDALQAAMNAIIENG 296

Query: 253 ELG 255
           +  
Sbjct: 297 DYK 299


>gi|302542600|ref|ZP_07294942.1| secreted protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302460218|gb|EFL23311.1| secreted protein [Streptomyces himastatinicus ATCC 53653]
          Length = 320

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 72/244 (29%), Gaps = 21/244 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+  G +K G +           NG   G D D   AL   +       ++       
Sbjct: 60  QKIQDAGVIKVGSDINYPPVEFK-KNGKVMGLDPDLANALGKELG---VTFEFNNATFDT 115

Query: 88  RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMHK--KK 135
               L+S++ DI          R          +   G+ F    +  G      K   +
Sbjct: 116 LLSGLRSQRYDIAMSAMTDNKGRQDGVDPDTGKKAGEGVDFVD-YFTAGVSIYTKKGADQ 174

Query: 136 GISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            I +   L G  I VQ GT +            K+   K     F    E     R    
Sbjct: 175 SIKTWDDLCGKKIVVQRGTVSHDLAKAESKKCEKSGKRKIAVEAFGNDTEAQTRLRGGGA 234

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            A + D         T+    +  ++ + +  +P   A+ + +TE  + +      ++  
Sbjct: 235 AAGSSDFPVAAYAVKTSGGGKDFQLVGEQVDAAPYGIAVSKDNTELRDALQQALALIIAN 294

Query: 252 EELG 255
            E  
Sbjct: 295 GEYD 298


>gi|253584220|ref|ZP_04861418.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
 gi|251834792|gb|EES63355.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
          Length = 241

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 82/251 (32%), Gaps = 24/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   ++  ++L  +  +              +  G N     F  +  NG+ KGFD
Sbjct: 1   MKKLFKSLVMGAMVLSLSVTAFAKE---------KIYVGTNAEFPPFEYL-ENGEIKGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    +   +  D   I+ + +       ALQ K++D++         R     ++F  
Sbjct: 51  MELVNEIGKILDAD---IKIVDMAFDGLLPALQMKKVDLVIAGMTANEER--MKTVSFTQ 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y   Q  I+ +    I S + L G  + V  G T ++ +++             F   
Sbjct: 106 PYYTASQVIIVKEGNDSIKSFNDLKGKKVGVMLGFTGDMVVSEI-----EGVKIERFNAA 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A +A + +A   D          N      V+      +   A A+ + D     
Sbjct: 161 YAGIMALQAGKVEAVVLDSEPAKNYVAQNKG---LVLADADAEQEEYAIAVRKNDKALLE 217

Query: 240 IVSWTHYAMVT 250
            V      +  
Sbjct: 218 KVEKALKEIKE 228


>gi|116249395|ref|YP_765236.1| putative substrate-binding periplasmic protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254045|emb|CAK12442.1| putative substrate-binding periplasmic protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 275

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 78/246 (31%), Gaps = 9/246 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               ++  ++      +       ++ + G +  G       +    A+G + GFD++  
Sbjct: 14  LRAGLVTCLLAMGAGSAAAVDNPYNLIEPGTISVGTMGDSKPYTFATADGQFTGFDIELF 73

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             + S +     K+ +          ++ +++ D+       T  R+ +  + F      
Sbjct: 74  LNVVSRLGFQKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARKKT--IDFSDGYLA 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                +     GI     L G  + V  GT  E+  A  F         + F       A
Sbjct: 132 GYLSVLTP-DAGIKDADGLKGKRLGVVQGTLQEVYAAKNFG----GTDLVKFPDNNSAVA 186

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A      DA+  D     A +     P+  V +      +P    + +G+  +   ++  
Sbjct: 187 ALNNGTVDAHFLDYE--AAKQYGERYPALKVAVNIPSFDAPAGFVVRKGNDAFRTALNGA 244

Query: 245 HYAMVT 250
            +  + 
Sbjct: 245 LHDAMQ 250


>gi|330809596|ref|YP_004354058.1| Putative cyclohexadienyl dehydratase precursor [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377704|gb|AEA69054.1| Putative cyclohexadienyl dehydratase precursor [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 263

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 80/250 (32%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILC-LIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M        LC L+ L   + +  A S+L  + +RG LK         +      G+++G
Sbjct: 1   MKNITSSMTLCGLLALSGGALAEPAPSLLDQVLQRGELKVCTTGDYKPYTFKTEAGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  R+L++++      +Q++    K     + + Q DI       TL R+     + 
Sbjct: 61  IDIDMARSLAASLGVK---VQWVQTTWKTLMPDMVAGQCDIGMGGISVTLERQKKAYFSD 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVF 176
                          K+   ++ Q++  S+ +      T E  +  +          + F
Sbjct: 118 TLDVDGKIPLVRCEDKERYQTLEQMNQPSVRLVEPAGGTNEAFVRAFLPNGQ-----LSF 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                I       + D    D S     +         V     +     A  + + D  
Sbjct: 173 HDNVTIFQQLLDKKADVMITDASE-ALYQQKLKPGLCAVNPTRYLQYGEKAYLLPRDDAT 231

Query: 237 WYNIVSWTHY 246
           W   V    +
Sbjct: 232 WKMYVDQWLH 241


>gi|289434115|ref|YP_003463987.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170359|emb|CBH26899.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313634164|gb|EFS00821.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri FSL N1-067]
 gi|313638787|gb|EFS03871.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri FSL S4-171]
          Length = 480

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 86/281 (30%), Gaps = 14/281 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   IL L I     F    + L           G +T    F   + NG+  G D
Sbjct: 1   MKK-FSRFILTLAIACVAIFIFTGNGLDAKAAEKTYLIGTDTTFAPFEY-EENGEQVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++        K +   +       AL+S Q+D +      T  R+      F  
Sbjct: 59  MDILKAIAKD---QNFKYEIKAMGFNAAVQALESNQVDGVIAGMSITDERK--QKFDFSD 113

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    ++     I S   L G  + V+ GT            +      +VF+  
Sbjct: 114 PYYESGVVMGVLKDNDEIKSYDDLKGKKVAVKTGTEGYAFAEKVKDKYGFD--IVVFDDS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++    +     A   D   L        + +   I+      +    A+ +G+ +   
Sbjct: 172 AQMYDDVKTRNSVACFDDYPVLA---YGVQKGNGLKIVTKQEKGNSYGFAVNKGENQELL 228

Query: 240 IVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGI 279
                    + A  E     +          N   + F+GI
Sbjct: 229 EKFNAGLTNIHASGEYDDIVEKYLGKDAIKANETEKGFMGI 269


>gi|158320976|ref|YP_001513483.1| diguanylate cyclase/phosphodiesterase [Alkaliphilus oremlandii
           OhILAs]
 gi|158141175|gb|ABW19487.1| diguanylate cyclase/phosphodiesterase [Alkaliphilus oremlandii
           OhILAs]
          Length = 737

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 64/317 (20%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           + ++ ++++S  A        R  +    +     +  +   G++KGF+VD   ALS  +
Sbjct: 3   VSVIGYSTYSKGAPQRDYGASREVISVAGDENHPPYEYMDRIGNYKGFNVDIINALSIEL 62

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             D   I+++P+N +E   AL++K++D++ +    T  R+        P        F++
Sbjct: 63  GMD---IEFIPMNWREALRALENKEVDVI-QGMSSTEERKEKYLFT-IPTVTNSQSIFVL 117

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                +  +  LSG  +  QAG   E  LAD           +  +   E   +      
Sbjct: 118 KDTSIVFGLEDLSGMKVAFQAGDLNEEILADI-----PDITLLPKKDQNEAMDSLINGEA 172

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DAY G+          +   S   I+ + ++ S   PA  +G+ E  ++ +    A    
Sbjct: 173 DAYVGNRLTGLFYLQKSKNSSTVKIVGEQMATSEYGPATYRGNEELVHLFNKGIEA---- 228

Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311
                                                           I+  G Y ++++
Sbjct: 229 ------------------------------------------------IKSNGTYDKIYE 240

Query: 312 RNLGNQSELKIPRGYNA 328
           +  G    +   R  NA
Sbjct: 241 KWFGKD--IGNGRILNA 255


>gi|91790052|ref|YP_551004.1| cyclohexadienyl dehydratase [Polaromonas sp. JS666]
 gi|91699277|gb|ABE46106.1| cyclohexadienyl dehydratase [Polaromonas sp. JS666]
          Length = 273

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 87/254 (34%), Gaps = 14/254 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           FV +         +    AS L  ++K G L+         F+  K +G ++G DVD   
Sbjct: 22  FVMLSGASAQTAAASVPPASSLDAVQKAGVLRICTPGDYKPFSFQKPDGAFEGIDVDLMA 81

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           +L++++   P    ++  +       + + + D+       T  R+      F      +
Sbjct: 82  SLTASLGVKPE---WVKTSWSNLMPDMVAGKCDLAVGGISVTTERQK--KAFFSTAYMVN 136

Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           G+  I          +V+ +   +  V    G + E      FK   M+ +P      +E
Sbjct: 137 GKTPIARCADVAKYQTVADIDKPATRVIFNPGGSNERFARANFKQAQMRLNPENLTIFDE 196

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           I     A+R D +  + SA    +         +     +    +A  + +GD  +   V
Sbjct: 197 IL----ANRADVFVTE-SAEAITQQRLKPGLCAINPDKPLQYGEMAYLLPRGDVTFKAYV 251

Query: 242 SWTHYAMVTAEELG 255
               +    + E  
Sbjct: 252 DQWLHLAKASGEYQ 265


>gi|161523018|ref|YP_001585947.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189348154|ref|YP_001941350.1| periplasmic substrate-binding protein [Burkholderia multivorans
           ATCC 17616]
 gi|221212045|ref|ZP_03585023.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
 gi|160346571|gb|ABX19655.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189338292|dbj|BAG47360.1| periplasmic substrate-binding protein [Burkholderia multivorans
           ATCC 17616]
 gi|221168130|gb|EEE00599.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
          Length = 262

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F     +G  +GFD+D   AL + +    +K  ++  +      
Sbjct: 25  KEWTTIRIGVDPTYPPFESTATDGSVQGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 81

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            LQ+++ D++  +   T  R     + F    Y +    I     G +   ++L+G  I 
Sbjct: 82  GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPEAAKLAGKRIA 139

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E    + + A       + +   ++  A     R D    D        L   
Sbjct: 140 VEQGTIQETYAREKWAAAK--VEVVPYPSYDQAYADLVNGRVDGVLMDAVQGQLGFLATP 197

Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           R         ++    +     A  + + DT+  + ++   
Sbjct: 198 RGKGFSFAGGVVYDPKIMGNGDAAGVRKADTDLRDALNRAI 238


>gi|163856554|ref|YP_001630852.1| glutamine ABC transporter periplasmic protein [Bordetella petrii
           DSM 12804]
 gi|163260282|emb|CAP42584.1| glutamine-binding periplasmic protein precursor [Bordetella petrii]
          Length = 248

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 83/246 (33%), Gaps = 20/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L  + L     +  A       +   L    +T  V F   + +  + GFD
Sbjct: 1   MIKRRIAAALVGLSLIGAVSTAAA-------QDKELIVATDTAFVPFEFKQGS-TYTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K +  P++       LQ+K ID+           +    + F  
Sbjct: 53  IDLWAAIAKEL---NLKYKLQPMDFNGIIPGLQTKNIDVALAGITI--RDDRKQVIDFSD 107

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I S   L+G S+ V+ GT T     D+ K    +    +F  +
Sbjct: 108 PYYESGLAILVAANEDAIKSAKDLAGKSVAVKTGTATV----DFMKKEVPEAKLRLFPNI 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T  +     ++  + S      A  +G ++   
Sbjct: 164 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGTVKSGDFYGIAFPKG-SDLVA 221

Query: 240 IVSWTH 245
            V+   
Sbjct: 222 KVNQAL 227


>gi|308183091|ref|YP_003927218.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter pylori PeCan4]
 gi|308065276|gb|ADO07168.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter pylori PeCan4]
          Length = 258

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 74/250 (29%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIS--FFEGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSETIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAMQRLI 238


>gi|84388560|ref|ZP_00991107.1| hypothetical amino acid ABC transporter, periplasmic amino
           acid-binding protein [Vibrio splendidus 12B01]
 gi|84377109|gb|EAP93980.1| hypothetical amino acid ABC transporter, periplasmic amino
           acid-binding protein [Vibrio splendidus 12B01]
          Length = 260

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 21/248 (8%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   ++   +     F    ++G   GFD++   AL      D     ++  +      +
Sbjct: 23  QAKEIRLASDFTYPPFNYKNSDGVPVGFDIEIADALCEQAKLD---CTWVSQSWDSLIPS 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +++ D++  +   T  R+    + F    Y     F+  K    S     L+G +I V
Sbjct: 80  LLARKSDVIMASMRITEERKR--KILFTDKYYQTPAVFVAAKSAEFSVDEAGLAGKTIGV 137

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GT  +  + D F       +   +   +E+    +  R D   G+   L    L    
Sbjct: 138 QQGTIHDRYVTDKF---GDVANIKRYTGQDEVYLDLQNGRLDLTFGNSDQLSLAFLDKKE 194

Query: 211 PSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
                     ++         A A+ + D++     +         EE+       ++++
Sbjct: 195 GEGFEFKGKAVTDKAYIGEGTALALRKQDSKLAKQFNAAI------EEIRANGT-YDKIA 247

Query: 266 KDTTNPDV 273
                 D+
Sbjct: 248 AKYFTFDI 255


>gi|238753467|ref|ZP_04614830.1| Arginine-binding periplasmic protein 1 [Yersinia ruckeri ATCC
           29473]
 gi|238708420|gb|EEQ00775.1| Arginine-binding periplasmic protein 1 [Yersinia ruckeri ATCC
           29473]
          Length = 243

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +    +   +          +L+ 
Sbjct: 22  TIRFAAEASYPPFEFIDANNKMQGFDIDLANALCKEM---QATCTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R   +   F    Y +   FI  K   ++ ++ L G  + +Q GT
Sbjct: 79  KRFDAVISGVDITPERLKQVA--FTQPYYDNSALFIAQKG-KVTDLAALKGKRVGMQNGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L +           + ++  +      +  R DA  GD + +      ++   P 
Sbjct: 136 THQRFLLEKHPE----ITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQSEELAPV 191

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            + I       + L  A+ Q +TE    +    
Sbjct: 192 GNKISDADYFGTGLGIAVRQNNTELLGKLDAAL 224


>gi|229526417|ref|ZP_04415821.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
 gi|229336575|gb|EEO01593.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
          Length = 278

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 12/243 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G     +K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           K               V+             +    K   + F+   +           A
Sbjct: 138 KLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAM 248
                       + +      +   + +SK   A A+  G+ +        I   T    
Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGW 256

Query: 249 VTA 251
           + A
Sbjct: 257 LQA 259


>gi|330821899|ref|YP_004350761.1| Cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia gladioli BSR3]
 gi|327373894|gb|AEA65249.1| Cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia gladioli BSR3]
          Length = 260

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 73/224 (32%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    A+G   GFD+D    +   I    +K  ++  +      
Sbjct: 23  KDWSTVRFGVDASYPPFESKGADGKLVGFDIDLGNEICRRI---AAKCVWVENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
           AL++++ D +  +   T  R   +   F    +      +      +   +  L G ++ 
Sbjct: 80  ALKARKFDGVLSSMSMTPQRAEQIA--FSAKLFNTPTRLVAKDGAKLLPTADSLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y+         + ++  +++ A   + R DA   D        L   
Sbjct: 138 VEQGTIQETYAKTYWAPKG--VTVVPYQNQDQVYADLLSGRLDATLQDAVQAEIGFLKTP 195

Query: 210 RPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           R   +                    + + DT+    +     AM
Sbjct: 196 RGKGYAFAGGDIDDPKTLGEGAGVGLRKEDTDLKAKIDGAIAAM 239


>gi|209546331|ref|YP_002278221.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539188|gb|ACI59121.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 276

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 11/223 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
              A    +IK RG +  GI      +  V + G   G D D     +  +      +++
Sbjct: 27  PAAAITPDEIKARGKIIVGIQGDNPPWGFVTSGGKQDGLDADIATLFAKELG---VSVEF 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL    R  AL + ++D+L        L + +  + F      +    I  K   I + 
Sbjct: 84  VPLEVNNRIPALTAGRVDVLFATMAM--LPDRAKAVQFSKPYVANAIVLIGPKSAEIKTN 141

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + ++  ++ V  G   +  +               ++       A  + + D   G+   
Sbjct: 142 ADMAKFTVGVAKGAAQDTQVTKNAPE---GTTIRRYDGDAASVQALVSGQVDTLGGN--I 196

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            Y  ++   RP E     +   K         G+ E    ++ 
Sbjct: 197 FYMDRVNKARPGEFENKLE-FQKLYNGACTRLGEKEINAALNT 238


>gi|289178329|gb|ADC85575.1| ABC transporter amino acid-binding protein [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 363

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 66/229 (28%), Gaps = 13/229 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +   +KK G L  G +T       +  +G    G+DVD  +A++  +  +P      
Sbjct: 112 AALVPDYVKKDGKLTVGTDTTYAPAEFIGEDGKTAVGYDVDLTKAIAKVMGLEPETAV-- 169

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                    ++ S + DI   +   T  R     + F                       
Sbjct: 170 -SEFDMIIPSIGS-KYDIGISSFTVTPER--QEAVDFVTYYKAGSTWVTQKGNPDKVDTK 225

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGD 197
            L G  + VQ GTT E  L    +              F +  ++  A    +  A    
Sbjct: 226 DLCGVKVAVQTGTTQEEELNKMNEQCKADGKKAIELQTFAKQTDVTTAVVNGKA-AVFYA 284

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            S +    +     +   +  D          + +GD +    V     
Sbjct: 285 DSPVAGYAIEQTDGALAPLGADEGVTEE-GIIVKKGDKQMDEAVQKAVQ 332


>gi|319779072|ref|YP_004129985.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Taylorella equigenitalis MCE9]
 gi|317109096|gb|ADU91842.1| Lysine-arginine-ornithine-binding periplasmic protein precursor
           [Taylorella equigenitalis MCE9]
          Length = 259

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 84/246 (34%), Gaps = 26/246 (10%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +L   +    + + +A       +   ++ G +     F  + A G+  GFD+D  +A+
Sbjct: 7   VLLAGFMASTMAGAVHA-------EDKVIRFGSDATYAPFEYMNAEGEVIGFDIDIAKAM 59

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              +    +K  +          AL++K+ D+++ +   T  R+    +AF  + +    
Sbjct: 60  CERM---KAKCTFQNQAWDGIIPALRAKKFDVIASSMSITPERQK--AVAFTKMIWNSPN 114

Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             +  K        +   G  I VQ  T  +     YFK          ++  ++     
Sbjct: 115 PLVGKKGATAQPTVEGTKGKVIGVQQATIQDRYATKYFK----DAQIKRYKTFDDALNDL 170

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSP------LAPAIIQGDTEWY 238
              R +    D+       L + + ++   + D  +    P         A+ + D E  
Sbjct: 171 VLGRVELVFCDVGVG-DEFLKSSKGADFEFIGDAVLSKDDPEIFGVGTGFAVRKQDKELL 229

Query: 239 NIVSWT 244
             ++  
Sbjct: 230 ESLNKA 235


>gi|291519630|emb|CBK74851.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 262

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 74/257 (28%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDW 56
           M K     +L  ++ L   +    +       + G     K   +T    F     NGD+
Sbjct: 1   MRKRLISGLLTGVMALSLVACGGTSGTGTSDNQSGSDKVWKIATDTSFKPFEYTDNNGDF 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D   A++              L       A Q+ Q D L      T  R    G 
Sbjct: 61  VGIDMDILAAVAEDQGFKYEV---QVLGWDASIAACQAGQADALMAGASITDER-KGSGW 116

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y   Q   +     I     LSG S+ V+ GT +         + +  +    F
Sbjct: 117 IFSDGYYDANQSMAVESSSDIKGFEDLSGKSVAVKTGTMSASYAESL--SADYDFTVTYF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGD 234
           E    +  A    +  A   D   +             + + D     P     AI   D
Sbjct: 175 EDSPTMYQAVVGGQVAACFDDTPIMA---SNIKDTGIALKILDGTGNDPASYGFAIFNAD 231

Query: 235 TEWYNIVSWTHYAMVTA 251
            +    +  T    + A
Sbjct: 232 NQELVDMFNTGLKNIKA 248


>gi|254360618|ref|ZP_04976767.1| possible arginine ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica PHL213]
 gi|153091158|gb|EDN73163.1| possible arginine ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica PHL213]
          Length = 241

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 28/247 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S +    L   +                +   +      F      G+  GFD
Sbjct: 1   MKKLLLASAIAFATLSANAQE-------------TITFAMEPSYAPFETTNEKGEVIGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   +    +  ++   +       L+ K  D +    D T  R+  +   F  
Sbjct: 48  VDIAKALCEEL---KATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEARQKQVA--FTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +   ++  K K     +     ++ VQ GTT +  L+   K    +Y+   +  ++
Sbjct: 103 AYLENSVSYVAMKGKFTPETA----KNVGVQNGTTFQQYLSKNAK----QYNLKPYASLQ 154

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD   L     T          ++      +    A+ + +T   
Sbjct: 155 SAVLDLKNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALL 214

Query: 239 NIVSWTH 245
             ++   
Sbjct: 215 EKLNSAL 221


>gi|189425448|ref|YP_001952625.1| amino acid ABC transporter periplasmic protein [Geobacter lovleyi
           SZ]
 gi|189421707|gb|ACD96105.1| extracellular solute-binding protein family 3 [Geobacter lovleyi
           SZ]
          Length = 260

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 15/215 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ GI       A ++ +G   G + D  + L+        +++Y  +       ALQS 
Sbjct: 29  LRVGIAPTYPPLAFMQ-DGVLAGIEPDLAQQLAKQTG---RRVRYEIIPFDRLITALQSG 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS----GASICVQ 151
           Q+D++      T  R     ++F       GQ  ++ +K        L     G  + V+
Sbjct: 85  QVDLIMAGMSITAER--QGQISFTNSYLKVGQMLLIREKDIKRFPRALFDQSAGVRVGVE 142

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+T E      F         I F+  E    A      D +  D   ++         
Sbjct: 143 KGSTGEQYALKTFAWGG----VIHFDTTEAGIRALEQGSIDCFVHDAPTVWRFSADLATQ 198

Query: 212 SE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  V L + ++  PLA A+ + D    + ++   
Sbjct: 199 HQGLVGLFEPLTDEPLAWAVRKNDPALLDQLNQEL 233


>gi|260462070|ref|ZP_05810315.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259032317|gb|EEW33583.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 265

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 65/214 (30%), Gaps = 10/214 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F     +G ++GF+VD     +              L  +  F A  S
Sbjct: 29  VLNVGAYPTNPPFEYKNESGTFEGFEVDIVNEAAKRAG---MTTDIADLGFQALFAATTS 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ID+   +   T  R      +F    Y    G        +++ + L G  + V +G+
Sbjct: 86  KRIDVAISSITITPER--LKSQSFTQPYYDSDMGIATKTDSAVNTEADLKGKIVGVLSGS 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E  +  + +A         ++  + +     A R DA   DI  +             
Sbjct: 144 TGETWVKGHQEADGFS-DVKGYDTQQNLLLDLSAGRVDAAVSDIPGMEYSFTKMKDLKVK 202

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +            + +        ++    AM
Sbjct: 203 QRIKTG---EQYGLMMTKDHP-LLGKLNDALTAM 232


>gi|153011396|ref|YP_001372610.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563284|gb|ABS16781.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 277

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 77/232 (33%), Gaps = 10/232 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVD 62
               S   ++   F+    + + L  IK RG L+ G+  G   + +   A G+W GF V 
Sbjct: 10  TLLGSAAVMLAPGFSWAVEDGATLKSIKDRGALRIGVFNGTPPYYQKNLATGEWDGFCVS 69

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R L+  I      ++ +        + LQ  +IDI+         R     + F    
Sbjct: 70  MGRDLAEYIG---VPLEMVETTWGNSVMDLQGGKIDIMFA-LSNNPERAK--SVDFTEAM 123

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             +    I  K + + +  +L+   I V     +   L  + +        +  +  +E 
Sbjct: 124 MDNVFTVITGKDREVKNWEELNKPEIRVTVDLGSTQDL--FARKTLPNCTLVALKGADET 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             A ++ R D                      V +P+ +   P    + + +
Sbjct: 182 VIALQSGRADVIVQVALMSVVTAHKLGN-KFKVFVPEPLDSQPTTIGVRKDE 232


>gi|322386877|ref|ZP_08060501.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus cristatus ATCC 51100]
 gi|321269159|gb|EFX52095.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus cristatus ATCC 51100]
          Length = 289

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 81/249 (32%), Gaps = 13/249 (5%)

Query: 2   YKDFFVSILC----LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K    +       L +    + S++AS      K+  ++ G       F+    +G   
Sbjct: 16  KKILKYTATAVVGSLAVGLLVACSSSASK-DSATKKKTIEVGTVGTTKPFSYEDKDGKLT 74

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++++  R +      D  ++ +        F  L S +  I + N       + +    
Sbjct: 75  GYEIEVLREIFK--GSDKYEVNFNKTKWASVFSGLDSDRYQIGANNIS--YSEDRAGKYL 130

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +      +    ++ K   I S+  + G S  V  GT+T   L  Y + H+     I + 
Sbjct: 131 YTNPYAKNPTVLVVRKGVNIKSLDDIGGKSTEVVQGTSTAKQLEKYNEEHSSNPTTINYT 190

Query: 178 R--VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
              +++I A     R D    +        + +       ++     + P     +  G 
Sbjct: 191 DGTIQQILANLNDGRSDYKIFER-ITVDTIIKDQGLDNVEVIELPSDQQPYVYPILASGQ 249

Query: 235 TEWYNIVSW 243
            E    ++ 
Sbjct: 250 EELQTFMNK 258


>gi|154487057|ref|ZP_02028464.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis
           L2-32]
 gi|154084920|gb|EDN83965.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis
           L2-32]
          Length = 516

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 82/257 (31%), Gaps = 18/257 (7%)

Query: 5   FFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            F  +  +   F T    + ++       +K +   K G +T    F     NG   G D
Sbjct: 21  LFAVLAVVFAAFMTTVPHALASETGNPASVKGK-TYKIGTDTTFAPFEYR-ENGKMTGID 78

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  R ++     +  K++   L       AL S Q+D++      T  R+      F  
Sbjct: 79  MELIRGIAKE---EGFKVEIQSLGFNAALQALSSNQVDVVIAGMSITDERKA--SYDFSN 133

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    +      ++    L G ++  + G+  E     +   +  K   +  ++ 
Sbjct: 134 PYFQSGIQMAVAANNDDVTGYKDLKGRTVVAKTGSEGESYAKQHADKYGYKVTSV--DQS 191

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWY 238
             +    ++    A   D   L             ++ P +        A+ +  + +  
Sbjct: 192 STMYEMVKSGNAVAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGMNADLL 248

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     M+ + E  
Sbjct: 249 AAINDGLNKMIASGEYE 265


>gi|206576680|ref|YP_002240880.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino
           acid-binding protein [Klebsiella pneumoniae 342]
 gi|206565738|gb|ACI07514.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino
           acid-binding protein [Klebsiella pneumoniae 342]
          Length = 243

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 11/219 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G  T    F          GFD+D   AL   +    ++ Q+          AL+ 
Sbjct: 22  TLHFGTTTANPPFVTTNGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    +   +RE  +   F         G ++  K    + + L    I V  GT
Sbjct: 79  KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVIVNKDVAHTFADLKAKKIGVVKGT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212
             +  L D  KA       I ++ V    AA +A        D + L A +  N      
Sbjct: 137 LHQHYLRDKQKA----VQAIPYDDVASALAALKAGEITGVMSDFATLDAWQQENPDYAIM 192

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           +             A A+ + D E  N ++    A++  
Sbjct: 193 DERATDPAYYGKQYAIAVRKDDPELLNAINDALTAVMAT 231


>gi|170694323|ref|ZP_02885477.1| Arogenate dehydratase [Burkholderia graminis C4D1M]
 gi|170140746|gb|EDT08920.1| Arogenate dehydratase [Burkholderia graminis C4D1M]
          Length = 265

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 81/272 (29%), Gaps = 24/272 (8%)

Query: 1   MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K     +  +  +           +     AS L DI  RG L+         ++  K
Sbjct: 1   MKKVALALLSVVAGVLIHSGAVQAQASGTPATASRLDDILARGTLRACTTGDYKPYSFYK 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G ++G D+D   +L+ ++      ++    N    F+A    + DI       TL R+
Sbjct: 61  TDGQFEGIDIDMTESLAKSLGVKAEYVKTSWSNLMNDFVA----KCDIGVGGVSPTLERQ 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAH 167
                 F      DG+  I+           +        + V  G T E     +F   
Sbjct: 117 K--RAFFTQAYMVDGKTPIVRCDDVNKYQTVAQIDQPATRVIVNPGGTNERFAKQFFSHA 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           NM     V+     I     A + D    D S    L+   +     V           A
Sbjct: 175 NMT----VYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKA 229

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
             + +GD  +   V    +      E      
Sbjct: 230 WLLPRGDVAFQQYVDQWLHLARATGEYQAVSD 261


>gi|94986058|ref|YP_605422.1| extracellular solute-binding protein [Deinococcus geothermalis DSM
           11300]
 gi|94556339|gb|ABF46253.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 222

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL-ALQSKQI 97
           G +     F     NG  +GFD+D  RA++  +     +++   +        A+ S ++
Sbjct: 3   GTDPTFAPFEFAGPNGQVQGFDIDIARAIAQDLG---VRLEVRAVGFGALMPQAVTSGRV 59

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTT 155
           D+       T  R     ++F    Y   Q FI+        +  + + G  I VQA TT
Sbjct: 60  DMAMSGITITPERAKV--VSFSAPYYRSAQVFIVRGGNPGKFAWPADVKGRVIGVQANTT 117

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +    D  K         V++      A  RA R  A  GD   +  L+     P +  
Sbjct: 118 GQYAAGDLLKPKG--ATIKVYDDFAAGLADVRAGRVAALIGDAPTVADLQKRL--PGQFQ 173

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                +       A+ +G ++     + T   +  + E  
Sbjct: 174 QAGKPLVAEDYGIAVQKG-SDLAAAANQTLARLKASGEYQ 212


>gi|320547054|ref|ZP_08041352.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448291|gb|EFW89036.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 733

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 11/222 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
             K  +++    F     +G ++G DVD  +A++     +   I+           A+Q+
Sbjct: 280 TYKIVMDSSFAPFEYQNDSGKYEGIDVDLIKAIAEQQGFN---IELSNPGFDAALNAVQA 336

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R+      F    Y       + K   + S   L+G ++  + GT
Sbjct: 337 GQADAVIAGMSITDARKEI--FDFSDPYYTSNILLAVKKGSSVKSYEDLNGMTVGAKNGT 394

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L+++   +        F+    +  +  +   DA   D      L+    +  + 
Sbjct: 395 ASYTWLSEHADQYGYS--LRAFDEASTMYDSLNSGSIDALMDDE---AVLRYAIKQGRKF 449

Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255
               D         A+ +G + E   + +    A+V + +  
Sbjct: 450 ETPIDGEKSGEYGFAVNKGANPELLEMFNNGLAALVKSGKYD 491



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 17/211 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       +L +I   F   +   A           +    +T    F    ++  +KG 
Sbjct: 1   MKHKLKAIMLAMISAIFVFGANAQADT---------ISVVSDTAYAPFEFKDSDQVYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD    +++    D   ++           A+Q+ Q D L   T  T  R+      F 
Sbjct: 52  DVDIINEVANREGWD---VKMTFPGFDAAVNAVQAGQADALMAGTTVTEARKKV--FTFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y             +++  QLSG ++ V+ GT  +  L +  K +N K     F+  
Sbjct: 107 DTYYDTAVVVYTRSNAKVTNYKQLSGKTVGVKNGTAAQSFLKENQKKYNYK--IKTFDTS 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + ++ +       A   D   +         
Sbjct: 165 DLMNNSLDTGSIYAAMDDQPVVQYAINQGKD 195


>gi|317009598|gb|ADU80178.1| putative polar amino acid transport system substrate-binding
           protein [Helicobacter pylori India7]
          Length = 258

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIG--FFGGFLNASSLYERLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------ASKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKNTPFKIAWESKEKDGGASFVINKRQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAVQRLI 238


>gi|304396841|ref|ZP_07378721.1| Prephenate dehydratase [Pantoea sp. aB]
 gi|304355637|gb|EFM20004.1| Prephenate dehydratase [Pantoea sp. aB]
          Length = 289

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 77/257 (29%), Gaps = 16/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +L       +S     S L  I     L+         ++ ++ +G ++G D
Sbjct: 36  MKKIVFSLLLA------SSAVQAQSHLDTILSSKTLRVCTTGDYKPYSFLRPDGQYEGLD 89

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +    AL++++    +K++++P   K       +KQ DI       TL R+ +   A   
Sbjct: 90  ISMANALATSLG---AKVEWVPTTWKTLMPDFLAKQCDIAVGGVSVTLKRQQTAWFARPL 146

Query: 121 ITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                        K    ++ QL      +   AG T E  +  +           +F  
Sbjct: 147 DVDGKIPLVRCTDKDRFQTIEQLNRPDVRLIEPAGGTNEAFVHSHLPKA----SLTLFHD 202

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I       + D    D S     +              +      A  I + D  W 
Sbjct: 203 NVTIFQQLVDKKADVMITDASEARFQQQHYPTLCAINPDKPLQYGE-KAYMIPRDDISWK 261

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +      E  
Sbjct: 262 LYVDQWVHLSTATGEYR 278


>gi|171779918|ref|ZP_02920822.1| hypothetical protein STRINF_01705 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281266|gb|EDT46701.1| hypothetical protein STRINF_01705 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 271

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 87/276 (31%), Gaps = 18/276 (6%)

Query: 1   MY-KDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
           M  K   +  L    +  L     S+N ++   + K+G L   I+     F     V   
Sbjct: 1   MKIKKLVLGALTFVSVFALAACGSSSNENLQEKVVKKGKLVVAISPDYAPFEFKTLVNGK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G DV+  +A++  +      ++   ++      +LQ+ + DI       T  R   
Sbjct: 61  DTIVGADVELAKAIADELGVK---LELSSMSFDNVLSSLQTGKADIAISGLSATKER--K 115

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               F    Y      ++        +S+S LSG  + VQ GT  E    D  K      
Sbjct: 116 NAYDFSDPYYETENAILVKTSNLDKFTSISSLSGQKVAVQKGTIEEGLAKDQLK----DS 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +    + E     ++ +  A   +          N   +              A A+ 
Sbjct: 172 KIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDIALAGFALKTSDGDAKAVAMP 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
           +G  E    V+     +   ++      +  Q++ +
Sbjct: 232 KGSGEMVKTVNKVIKKLAKDDKYKKYISDAAQLTAN 267


>gi|241666978|ref|YP_002985062.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862435|gb|ACS60100.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 276

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 77/235 (32%), Gaps = 11/235 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
              A    +IK RG +  GI      +  V + G   G D D     +  +      +++
Sbjct: 27  PAAAVTPDEIKARGKIIVGIQGDNPPWGFVTSGGKQDGLDADIATLFAKELG---VSVEF 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL    R  AL + ++D+L        L + +  + F      +    I  KK  I + 
Sbjct: 84  VPLEVNNRIPALTAGRVDVLFATMAM--LPDRAKAVQFSKPYVANAIVLIGPKKAEIKTN 141

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + ++  ++ V  G   +  +               ++       A  + + +   G+   
Sbjct: 142 ADMAKFTVGVAKGAAQDTQVTKNAP---PSTTIRRYDGDAASVQALVSGQVETLGGN--I 196

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            Y  +L   RP E     +   K         G+ E    ++     +    EL 
Sbjct: 197 FYMDRLEKARPGEFENKLE-FQKLYNGACTRLGEKEINAALNTFIDKIKANGELK 250


>gi|292487758|ref|YP_003530631.1| glutamine ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|292898987|ref|YP_003538356.1| glutamine ABC transporter substrate-binding protein [Erwinia
           amylovora ATCC 49946]
 gi|291198835|emb|CBJ45945.1| glutamine ABC transporter, substrate-binding protein [Erwinia
           amylovora ATCC 49946]
 gi|291553178|emb|CBA20223.1| glutamine ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
          Length = 249

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 74/214 (34%), Gaps = 12/214 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L    +T  V F   +  G + GFD+D   A++  +  +       P++      ALQ
Sbjct: 26  KKLVVATDTAFVPFEFKQG-GQYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPALQ 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           ++ ID+       T  R+    +AF    Y  G   ++      +  +  L+G  + V++
Sbjct: 82  TRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVKANNDAVKGIEDLNGKVVAVKS 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT +      + K          F  ++        +R DA   D   +     T  +  
Sbjct: 140 GTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGKG- 194

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +   + + I       A  +G  +    V+    
Sbjct: 195 QFKAVGNSIEAQQYGIAFPKGSDDLREKVNGALK 228


>gi|254477971|ref|ZP_05091356.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Ruegeria sp. R11]
 gi|214028556|gb|EEB69392.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Ruegeria sp. R11]
          Length = 259

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 27/257 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61
           K    ++L  + L  T+    A           +K G+       FA + ++G W G+++
Sbjct: 5   KTIRKTLLTTVALAATAVMAQAEP---------VKIGVAAEPYPPFASLDSSGTWVGWEI 55

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+ +A      +    P+       +L  +QID +  +   T  R  +  + F   
Sbjct: 56  DVINAVCAAA---ELECVITPVAWDGIIPSLTGQQIDAIMASMSITEERLKT--IDFSDP 110

Query: 122 TYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y      +  K   I  + + L G  + +QA T  +     YF          V++  +
Sbjct: 111 YYNTPAVIVADKSMDIDATPASLEGKIVGIQASTIHQAYAQKYF----TGAELRVYQTQD 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           E +    A R DA T   S   A  + +D  +   I   + +   +        + +G+T
Sbjct: 167 EANQDLFAGRIDA-TQADSIAMADFVGSDAGACCEIKGAVANDEAILGKGVGAGVRKGET 225

Query: 236 EWYNIVSWTHYAMVTAE 252
           +    ++    AM+ A+
Sbjct: 226 DILEALNKGI-AMILAD 241


>gi|24379263|ref|NP_721218.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|24377179|gb|AAN58524.1|AE014921_9 putative glutamine ABC transporter, permease protein [Streptococcus
           mutans UA159]
          Length = 728

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 17/211 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M   F   +L ++ + F   +  +A           +K   ++    F    ++  +KG 
Sbjct: 1   MKNKFKALMLGILSVIFMFGAKVSADT---------VKIVSDSTYAPFEFKDSDQVYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  +  ++ +     K+ +   +A     A+QS Q D L   T  T  RE      F 
Sbjct: 52  DVDIIKK-AAEMSGWNYKMTFPGFDAAVN--AVQSGQADALMAGTTVTKEREKV--FTFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y         K+  I+  SQL G ++ V+ GT  +  L  +   +  K     F+  
Sbjct: 107 HTYYDTKIVIATRKQDKITKYSQLKGKTVGVKNGTAAQSFLEKHQDKYGYK--IKSFDTG 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + +  +  +   DA   D +           
Sbjct: 165 DSMYNSLESASVDAVMDDKAVAQYAINQGQN 195



 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 11/220 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K  +++    F      G + G DV+  +A++        KI+            +QS Q
Sbjct: 276 KVVMDSSFAPFEFQNDAGQYVGIDVELIKAIAKQ---QGFKIKTENPGFDAALNTVQSSQ 332

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G  +  + GT +
Sbjct: 333 ADAVMAGMSITDDRKKI--FDFSDPYYTSNTLLAVRKGSNVVSYKDLKGKKVGAKNGTAS 390

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L          Y    F+    +  +  +    A   D      LK    +  +   
Sbjct: 391 YTFLEKN--KAKYGYTLKSFDEASTMYDSLNSGSIYALMDDE---AVLKYAIQQGRKFET 445

Query: 217 LPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
                       A+ +    E   + +    A+  + +  
Sbjct: 446 PIPGEKSGEYGFAVKKGSSPELIQMFNNGLAALKKSGQYD 485


>gi|307709473|ref|ZP_07645930.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
 gi|307619787|gb|EFN98906.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
          Length = 721

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKTEMIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L          +    F+  +
Sbjct: 106 TYYDTKVVIATTKAHKISKYDQLTGKTVGVKNGTAAQRFLETI--KDKYSFTIKTFDTSD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 67/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 FTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L      +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTKNQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452


>gi|317053694|ref|YP_004118828.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316952799|gb|ADU72272.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 267

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 26/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M      S + L+ +   + S  A         G  L+ G +     F    A G   GF
Sbjct: 1   MK-----SAVTLLTVMTMALSAQA------LAAGETLRVGADLSYPPFQYRDAAGTPTGF 49

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+  A+     K +Y+  +      +L ++++D +      T  R+    + F 
Sbjct: 50  EIDITNAVCKAV---QVKCEYVVSSFDAEIPSLMARKVDFI-SPLGATAKRQK--SIDFS 103

Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      + HK   +   V+ L G  I VQ G+  E+    Y+    +    +++  
Sbjct: 104 DFIYHIPTKLVAHKGSNLQPDVTSLQGKRIAVQQGSIQEMYANKYWAPKGVD--VVMYPD 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            + I     A R D       A+    L      +  +    +    L     A  + +G
Sbjct: 162 QDVIYQDLAAGRLDGALSPGVAVTYGFLNKPEGKDFALTGPEVRDDLLFSIGSAYGVRKG 221

Query: 234 DTEWYNIVSWTH 245
           D +   +++   
Sbjct: 222 DEKMQKLLNEGL 233


>gi|222106502|ref|YP_002547293.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737681|gb|ACM38577.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 279

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 80/223 (35%), Gaps = 11/223 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A  L   K +G +  GI      +  V ++G   G D D  +A +  +        +
Sbjct: 30  TAFAGTLEQAKAKGKVVIGIQGDNSPWGFVNSSGVQDGLDADIGKAYADYLGVKAE---F 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL    R  AL + ++DIL      T  R  ++   F      +       K K I S 
Sbjct: 87  VPLAVANRIPALMTGKVDILFATMGMTADRAKTIQ--FSKPYAGNVLSVYGPKDKKIGSY 144

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G S+ V   +  +  +         K   + F+       A  + + +A  G+   
Sbjct: 145 DDLTGVSVGVPKSSAMDTAITAGA---GSKASILRFDDDAANIQALISGQVEAVGGN--Q 199

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            Y  +L      ++    D+++       +  G+ +W   ++ 
Sbjct: 200 FYGDRLNAAAAGKYETKFDLVTL-YNGAGMRPGEKDWNESINS 241


>gi|119025595|ref|YP_909440.1| glutamine ABC transporter (binding and transport protein)
           [Bifidobacterium adolescentis ATCC 15703]
 gi|118765179|dbj|BAF39358.1| similar to glutamine ABC transporter (binding and transport
           protein) [Bifidobacterium adolescentis ATCC 15703]
          Length = 501

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 82/257 (31%), Gaps = 18/257 (7%)

Query: 5   FFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            F  +  +   F T    + ++       +K +   K G +T    F     NG   G D
Sbjct: 6   LFAVLAVVFAAFMTTVPHALASETGNPASVKGK-TYKIGTDTTFAPFEYR-ENGKMTGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  R ++     +  K++   L       AL S Q+D++      T  R+      F  
Sbjct: 64  MELIRGIAKE---EGFKVEIQSLGFNAALQALSSNQVDVVIAGMSITDERKA--SYDFSN 118

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    +      ++    L G ++  + G+  E     +   +  K   +  ++ 
Sbjct: 119 PYFQSGIQMAVAANNDDVTGYKDLKGRTVVAKTGSEGESYAKQHADKYGYKVTSV--DQS 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWY 238
             +    ++    A   D   L             ++ P +        A+ +  + +  
Sbjct: 177 STMYEMVKSGNAVAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGMNADLL 233

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     M+ + E  
Sbjct: 234 AAINDGLNKMIASGEYE 250


>gi|330684937|gb|EGG96617.1| ABC transporter, substrate-binding protein, family 3
           [Staphylococcus epidermidis VCU121]
          Length = 260

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 12/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F  I  + +L     ++N       K    ++ G       F          G+D
Sbjct: 1   MKRLLFCVIALVFVLAACGNNSNKDSKSSSKDDNTIRVGTEGTYAPFTFHNKQDKLTGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K+++   +    F  L + + D+++        RE      F  
Sbjct: 61  IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINKDREKKYK--FSN 115

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     ++   +K I S + + G  +  Q  T+    LA    A          +  
Sbjct: 116 PYTYSSAVLVVRENEKNIKSFNDVKGKKLA-QTFTSNYGQLAKDKGAK-----ITKVDGF 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      ++R DA   D  +    K          I  D            + D +   
Sbjct: 170 NQSMDLLLSNRVDATFNDSLSYLDYKKQKPNAKIKAIKGDAEKNKSAFAFSKKVDDKTVQ 229

Query: 240 IVSWTHYAMVTAEELG 255
             +     +    EL 
Sbjct: 230 KFNDGLKKIDENGELK 245


>gi|317011146|gb|ADU84893.1| putative polar amino acid transport system substrate-binding
           protein [Helicobacter pylori SouthAfrica7]
          Length = 255

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 75/251 (29%), Gaps = 16/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +LCLII  F  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKK-----VLCLIISLFWGFLNASSLYEKLINKETISVGTEGIYPPFTYHDKEGKLTGYD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 56  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 111

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 112 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 166 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 225

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 226 LINQAMQKLIN 236


>gi|308186222|ref|YP_003930353.1| Arginine-binding periplasmic protein 2 precursor [Pantoea vagans
           C9-1]
 gi|308056732|gb|ADO08904.1| Arginine-binding periplasmic protein 2 precursor [Pantoea vagans
           C9-1]
          Length = 243

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 73/218 (33%), Gaps = 12/218 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +    ++   +     F  +    +  GFD+D  +AL   +    ++  +          
Sbjct: 18  QAAETIRFAASATYPPFESLDKENNLVGFDIDLAKALCQQM---KAECTFTNNAFDSLIP 74

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           +L+ ++ D +    D T  R  S  + F    Y +    I  K    SS   L    I V
Sbjct: 75  SLKFRRYDAVISGMDITTER--SKQVDFTQPYYANSAIVIAPKG-RFSSFGDLKEKRIGV 131

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + GTT +  L D           + ++  +      ++ R D   GD + +      N  
Sbjct: 132 ENGTTHQKYLQDKHPE----VKVVAYDSYQNAILDMKSGRLDGVFGDSAVVNQWLKANPD 187

Query: 211 PSE--HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            +     +       + L  A+ +G+T   +  +    
Sbjct: 188 LATVGEHVTDADYFGTGLGIAVRKGNTALRDRFNQALT 225


>gi|294666123|ref|ZP_06731380.1| cyclohexadienyl dehydratase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604090|gb|EFF47484.1| cyclohexadienyl dehydratase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 259

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 6/252 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + + +  L+    T  +T AS L  + + G L+         ++ ++ +G ++G D+D 
Sbjct: 2   RYRICLALLLSCGTTHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRDDGQFEGSDIDL 61

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            ++L++++    ++ + +  +       L + + DI       TL R+     +      
Sbjct: 62  VQSLAASL---DARARLVRTSWPHLMPDLLADRCDIAVGGISVTLQRQRQASFSAVLDVD 118

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                     +    ++ QL+   + +            +      +    +F     I 
Sbjct: 119 GKIPLVRCVDQARYRTLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQATLRLFADNTTIF 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               AHR D    D S     +              +      A  + + D  W   V  
Sbjct: 177 QELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAYVDQ 235

Query: 244 THYAMVTAEELG 255
             +    + E  
Sbjct: 236 WLHLTKASGEYQ 247


>gi|290580730|ref|YP_003485122.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans NN2025]
 gi|254997629|dbj|BAH88230.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans NN2025]
          Length = 728

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 17/211 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M   F   +L ++ + F   +  +A           +K   ++    F    ++  +KG 
Sbjct: 1   MKNKFKALMLGILSVIFMFGAKVSADT---------VKIVSDSTYAPFEFKDSDQVYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  +  ++ +     K+ +   +A     A+QS Q D L   T  T  RE      F 
Sbjct: 52  DVDIIKK-AAEMSGWNYKMTFPGFDAAVN--AVQSGQADALMAGTTVTKEREKV--FTFS 106

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y         K+  I+  SQL G ++ V+ GT  +  L  +   +  K     F+  
Sbjct: 107 HTYYDTKIVIATRKQDKITKYSQLKGKTVGVKNGTAAQSFLEKHQDKYGYK--IKSFDTG 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + +  +  +   DA   D +           
Sbjct: 165 DSMYNSLESASVDAVMDDKAVAQYAINQGQN 195



 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 11/220 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K  +++    F      G + G DV+  +A++        KI+            +QS Q
Sbjct: 276 KVVMDSSFAPFEFQNDAGQYVGIDVELIKAIAKQ---QGFKIKTENPGFDAALNTVQSSQ 332

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G  +  + GT +
Sbjct: 333 ADAVMAGMSITDDRKKI--FDFSDPYYTSNTLLAVRKGSNVVSYKDLKGKKVGAKNGTAS 390

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L          Y    F+    +  +  +    A   D      LK    +  +   
Sbjct: 391 YTFLEKN--KAKYGYTLKSFDESSTMYDSLNSGSIYALMDDE---AVLKYAIQQGRKFET 445

Query: 217 LPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
                       A+ +    E   + +    A+  + +  
Sbjct: 446 PIPGEKSGEYGFAVKKGSSPELIQMFNNGLAALKKSGQYD 485


>gi|241766693|ref|ZP_04764534.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241362976|gb|EER58661.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 265

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 10/233 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           I L   + +     L  ++ +G +  GI T    +  +  +    G DV   + ++  + 
Sbjct: 17  ITLPLGASAQQDGSLKAVQDKGSISLGIPTDYPPYGFMGPDFKPTGVDVAVAQLIADKLG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +    ++   R   LQS++ID++         R+    + F        Q     
Sbjct: 77  VKADLVP---VSTPNRIPYLQSRKIDVIVSALGKNEERQKV--IDFSVSYAPFFQAVFGP 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K   + S + L+  ++ V  GT  +  L               FE      AA+   +  
Sbjct: 132 KNVEVKSFADLADKTLAVTRGTIQDDALQGLAPK---SLKIQRFEDDNATMAAFMTQQTQ 188

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 +   A       P        +I  SP    + +G+T   N ++   
Sbjct: 189 FVAVGAAVAAAALQ--KNPKVQAEYKLLIKDSPNYAGVRKGETALLNKINDIL 239


>gi|120609004|ref|YP_968682.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120587468|gb|ABM30908.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 255

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 14/249 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               ++    +    +FS  A  +  I+K G +          F          GF+V+ 
Sbjct: 2   KILKTMATAAVALCAAFSAQARPIDAIQKDGKIIIATEGQFAPFNYFNGT-QLTGFEVEV 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  +     K+++  L        L   + D+   +   T  R  S  + F    +
Sbjct: 61  ANLVAKKM---NLKVEWKTLGFDALLTGLGQDRWDVAIASHGVTEER--SKAVTFAAP-H 114

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +   G ++     I +   L+G  + VQ GT+    +               F    +  
Sbjct: 115 YCSGGMVIAMDPAIRTGKDLAGKVVAVQTGTSYLENVKKVPGVK----DVKNFPTDVDAR 170

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A  + R DA+  D     A ++    P   + L D++    +APA+ +G+T   +  + 
Sbjct: 171 SALTSKRVDAWVTDK--FVAKEVAAKNPKAGLKLGDMLFIEKMAPAVAKGNTGLADAWNK 228

Query: 244 THYAMVTAE 252
             +A + A+
Sbjct: 229 A-FAEILAD 236


>gi|86610271|ref|YP_479033.1| amino acid transporter, periplasmic amino acid-binding protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558813|gb|ABD03770.1| amino acid transporter, periplasmic amino acid-binding protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 309

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 6/201 (2%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +I   G L+  +   L         GD +GF+++    L S +      ++ +P++  ER
Sbjct: 73  EIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVER 132

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
              L   Q+D+       T  R     + F    Y DG   ++ +     S S L G  +
Sbjct: 133 LQVLADGQVDLAIAQIGITPDRAR--QVEFTSAYYQDGPSLVVARSHNWESWSDLRGGRV 190

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            V  G++    L  Y          +  +   E            +  D S L      +
Sbjct: 191 AVLRGSSAIPLLNRYLP----GVELVPVDSYREGAELLLKGAVQGWAADRSVLAGWLAEH 246

Query: 209 DRPSEHVILPDIISKSPLAPA 229
            R             SPLA  
Sbjct: 247 PRRESAAEQQFQFLGSPLATV 267


>gi|258541040|ref|YP_003175539.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152716|emb|CAR91688.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 484

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 21/309 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + + +S+L  + L   +       +   +K      G +     F     +  + G D
Sbjct: 1   MKRKWLLSLLVALPLMLGALI-PGKTVAAAQK--TYTIGTDVTFAPFEFANQDNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K++  PL       AL++KQID +      T  R+         
Sbjct: 58  LDLIKAIAKE---EGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPERK--QKFLMSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + KK  I S+  L G  + ++ GT +              +  + F+   
Sbjct: 113 PYYKSGVVMAVAKKSKIKSLKDLRGKRVAIKTGTDSADYANSI--KQKYGFTTVTFDDSN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A   D   +   +   +      ++     +     A  + +    + 
Sbjct: 171 NMYQDVITGNSAACFEDQPVM---QYGINNGMALKLVGKPAREGSYGFAASKNNQALISK 227

Query: 241 VSWTH--------YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            +           Y  +    LG       + +   +    + F+G+ K++      GL 
Sbjct: 228 FNTGLKKLRANGQYDKIIEHYLGNGSAESQKTAAGNSQTTDRSFIGLLKANWSTLMDGLR 287

Query: 293 KDWTYRIIR 301
           +     I+ 
Sbjct: 288 ETMVLTIVA 296


>gi|239943258|ref|ZP_04695195.1| putative serine/threonine protein kinase [Streptomyces roseosporus
           NRRL 15998]
 gi|239989717|ref|ZP_04710381.1| putative serine/threonine protein kinase [Streptomyces roseosporus
           NRRL 11379]
 gi|291446732|ref|ZP_06586122.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291349679|gb|EFE76583.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 668

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 74/223 (33%), Gaps = 6/223 (2%)

Query: 35  FLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L+ G+     G ++       ++G+D+D   A++ ++     ++ +  +    R  AL+
Sbjct: 414 TLEIGVKDDQPGLSKFDRKTRTYRGYDIDLAYAIAESMGYGKGEVAFTTVATDYRSTALK 473

Query: 94  SKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-I 148
           +KQ+D++  +   T  R+        + F    Y   +GF++ +K    +++  S    +
Sbjct: 474 TKQVDLVIASYSITDDRKTAGPDGYSVDFAGPYYEASRGFLVREKSAKYTINDSSDLRDL 533

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            V+  T  E T                    ++        + D Y      +       
Sbjct: 534 GVEVCTARESTYEKALPKQGFTMAKSQPNTYQDCLDKLLDPKSDVYAVASDDIILAGYVE 593

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             P +   L +I        A+          V      ++  
Sbjct: 594 ANPGKVRRLENIQGAEGYGVAMRPKSPVLKGEVCSALRTILAG 636


>gi|206562322|ref|YP_002233085.1| cystine-binding periplasmic protein precursor [Burkholderia
           cenocepacia J2315]
 gi|198038362|emb|CAR54319.1| cystine-binding periplasmic protein precursor [Burkholderia
           cenocepacia J2315]
          Length = 279

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 11/247 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +      +   +   +  +  A +L   +  G L+         ++ +       G+DV+
Sbjct: 11  RGLATLGIAGALALSSLDAGAADLLAAARGSGTLRVANTQSSPPWSLLDERNQPAGYDVE 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R +   I     ++ ++    K     L++ + D++  +   T  R  S  + F    
Sbjct: 71  VAREVGKRIGVK--QVVFVADAYKNFVEGLKAGKYDLVMNDLTPTAER--SKQVDFAKPY 126

Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             +     +      I   + L G  + V  G++ E     + +AH        ++    
Sbjct: 127 GVEDFRIFVRTDNTHIHGQADLKGKRVGVTTGSSNET----WARAHLKDADIRAYDNGGL 182

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +     + R DA          +K  N        + + +     APA+ +G       V
Sbjct: 183 VFNDLGSGRLDAVIISHFG--GMKYANVNHLPVKEVGEPLIYQLSAPALAKGQPALLAAV 240

Query: 242 SWTHYAM 248
                 M
Sbjct: 241 DKAIDDM 247


>gi|187780208|ref|ZP_02996681.1| hypothetical protein CLOSPO_03804 [Clostridium sporogenes ATCC
           15579]
 gi|187773833|gb|EDU37635.1| hypothetical protein CLOSPO_03804 [Clostridium sporogenes ATCC
           15579]
          Length = 262

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 10/245 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCR 65
           +S++  + +  T+ +     + +   +  +K G +     F  +   +   +GF++D   
Sbjct: 1   MSLVVTLGVGLTACAQKNKEINE--NKNTIKIGTSGQYYPFTFIDKDSNKVQGFEIDIWE 58

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +       P    +   +       L + +ID ++     T   +      F     + 
Sbjct: 59  EIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSKPYVYS 113

Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEID 183
           G      K    I S+  L G ++  Q GT    ++ DY   +         +     + 
Sbjct: 114 GVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYNSFSGMF 173

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R DA   D  A       +    +    P    ++         + E    ++ 
Sbjct: 174 QDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENREKIEKINK 233

Query: 244 THYAM 248
               M
Sbjct: 234 ALDDM 238


>gi|83942405|ref|ZP_00954866.1| cystine-binding protein [Sulfitobacter sp. EE-36]
 gi|83953625|ref|ZP_00962346.1| cystine-binding protein [Sulfitobacter sp. NAS-14.1]
 gi|83841570|gb|EAP80739.1| cystine-binding protein [Sulfitobacter sp. NAS-14.1]
 gi|83846498|gb|EAP84374.1| cystine-binding protein [Sulfitobacter sp. EE-36]
          Length = 250

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 24/220 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L  I L     +  A           L  G++ G   F  VK + + +GF+
Sbjct: 1   MIKH---ATLTAIALATGVSAAQAET---------LNVGMSGGYFPFTFVKLD-ELQGFE 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A++        ++ ++ ++      AL+S +ID ++     T  RE     AF  
Sbjct: 48  VDFINAVAKETG---DEVNFVTMSFSGLIGALESGRIDTIANQITITPEREA--KFAFSQ 102

Query: 121 ITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              FDG   ++    +  I SV  LSG ++ V  G+  E  L +    +  +     +E 
Sbjct: 103 PYVFDGAQVVVKEGNEDTIGSVEDLSGKTVAVNLGSNFEELLNEL--PNAGEIDIRTYES 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
               D A    R DA+  D  +   L   +  P      P
Sbjct: 161 NIAQDTAL--GRVDAFVMDRVSSAQLIAESPLPLALAGKP 198


>gi|107025353|ref|YP_622864.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116693464|ref|YP_838997.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|170737259|ref|YP_001778519.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|105894727|gb|ABF77891.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116651464|gb|ABK12104.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169819447|gb|ACA94029.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 257

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 18/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+  L  + +   + S  A           ++ GI+           +G  KGFD
Sbjct: 1   MKR--FLVPLVFLCIGLAATSAYA------LDAHVVRLGIDPTYPPMDAKAPDGSLKGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +         + Q++ L       ALQ+++ID +  +   T  RE    + F  
Sbjct: 53  VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITAKREK--QILFSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +     G+  + + L+G  + VQ+GT  E     ++    +    + ++  
Sbjct: 108 KLFRFKSRLVARPGSGLDGTAASLAGKRVGVQSGTQFESWALAHWAPAGVG--VVPYKSQ 165

Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +++ A     R DA       +    L+    +    V  P  +    +   + Q DT  
Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRQPRGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225

Query: 238 YNIVSWTHYAMV 249
              +     +M+
Sbjct: 226 KASIDGAIASML 237


>gi|310640366|ref|YP_003945124.1| glutamine transport system permease protein [Paenibacillus polymyxa
           SC2]
 gi|309245316|gb|ADO54883.1| Probable glutamine transport system permease protein [Paenibacillus
           polymyxa SC2]
          Length = 482

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 84/279 (30%), Gaps = 13/279 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L + +    + + N  ++   + +     G +T    F     NG + G D
Sbjct: 1   MQKPRKLIALMICLFSVVALAGNFGVVAHAENKTKYDIGTDTTFAPFEFEDVNGKFVGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++        +    PL       AL++ Q+D +      T  R+      F  
Sbjct: 61  MDLLAAIAKD---QNFEYTIKPLGFNAAVQALETNQVDGVIAGMSITDERK--QKFDFSE 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    + K    I     L G  + V+ GT                +  + F+  
Sbjct: 116 PYFDSGVVMAVRKDNDTIKRYEDLKGQRVAVKTGTEGYTFAESI--KAKYGFTTVPFDDS 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--W 237
            ++    +     A   D   L      N+      ++ D         A+ QG      
Sbjct: 174 SQMYDEVKTGNSVACFDDYPVLAYGVTQNNG---LKLVTDKEKGGSYGFAVNQGKNAELL 230

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
               +       + E   I  K + +  K     +  R+
Sbjct: 231 EKFNAGLVNLRNSGEYDKIMSKYLGESGKGVAPVERSRW 269


>gi|171316636|ref|ZP_02905850.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MEX-5]
 gi|171098183|gb|EDT42992.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Burkholderia ambifaria MEX-5]
          Length = 260

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 13/224 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    A+G   GFDVD    +   +    +K  ++  +      
Sbjct: 23  KDWTTVRFGVDASYPPFESKGADGKVVGFDVDLGNEICRRM---NAKCVWIENDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
           AL++++ D +  +   T  R+  +   F    +      +  K  G+  +   L G SI 
Sbjct: 80  ALKARKFDGVLSSMSMTPARQEQIA--FSEKLFNTPTRLVAKKGSGLMPTAESLKGKSIG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ GT  E     Y+ A       + ++  +++ A   A R D    D        L   
Sbjct: 138 VEQGTIQETYAKTYWAAKG--VKVVPYQNQDQVYADLIAGRLDGALQDAVQAEIGFLKTP 195

Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           R +        I       +     + + DT+    +      M
Sbjct: 196 RGANFDFAGKDIDDPKTLGNGAGIGLRKEDTDLKAKIDSAITGM 239


>gi|328464936|gb|EGF36224.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus MTCC 5463]
          Length = 473

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 76/230 (33%), Gaps = 16/230 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKI 78
            + S++  IK+   L  G +           V  N  + G D++  + ++  +    +K+
Sbjct: 14  ASDSVMKKIKQSKELVVGTSADYPPLEFTTSVNGNTKYVGVDIELAKDIAKDL---HAKL 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF---DGQGFIMHKKK 135
               ++     +AL++ ++D++         R+    + F  I Y    +        + 
Sbjct: 71  VIKNMSFDSLLVALETGKVDMVISAMTPNPERKK--SVDFSQIYYKSSGEYFLINKRDQT 128

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
               +   +G ++  Q G+     +    K    K       ++  +  A ++ +     
Sbjct: 129 KYKKIKDFAGQTVGAQTGSIQYQLIQSQMKKSKAKG----LGKINNLVLALKSGKMSGVV 184

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +          ND     V       ++  A AI +G       V+ T 
Sbjct: 185 MEE-LTAKAYAKNDNSLMAVRSDLREEQAGSAVAIAKGQPGLVKAVNKTI 233


>gi|261368434|ref|ZP_05981317.1| amino acid ABC transporter, amino acid-binding protein
           [Subdoligranulum variabile DSM 15176]
 gi|282569525|gb|EFB75060.1| amino acid ABC transporter, amino acid-binding protein
           [Subdoligranulum variabile DSM 15176]
          Length = 286

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 80/211 (37%), Gaps = 9/211 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  IK +G +  G             NG++ GFD +   A+   +  +P    ++ +N
Sbjct: 54  SDLQYIKDKGKMTIGYTV-YAPMNYTDDNGEFVGFDTELATAVCEQLGVEPE---FVEIN 109

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              + + L +K ID +      T   +I    +       + Q  +M    G +S + L 
Sbjct: 110 WDTKVVELDAKSIDCIWNGMTLTD--DIMANTSCTEAYAKNAQVVVMKTGSGYTSTADLV 167

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++  +AG+  E T+ +    +  +   +      +      A   DA   D++   A+
Sbjct: 168 GKTVVAEAGSAGETTIQE--DENLSQADYVSKGVQTDCLMEVAAGTADAAVLDLTLASAM 225

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                  ++  I+ ++ ++     A  +G  
Sbjct: 226 IGEGTDYADLEIVDELNAEE-YGVAFRKGSD 255


>gi|325063882|gb|ADY67572.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 278

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 11/230 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           F       A  + + K +G +  GI      +  V ++G   G D D  +A +  +    
Sbjct: 24  FIAPVDAFAGTVDEAKAKGKVVIGIQGDNSPWGFVNSSGVQDGLDADIGKAFAEYLGVK- 82

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++++PL    R  AL + ++D+L      T  R  ++   +      +       K K
Sbjct: 83  --VEFVPLAVANRIPALLTGKVDLLFATMGMTAERAKTIQ--YSKPYAGNVLSVYGPKDK 138

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I +   L+G S+ V   +  +  +         K   + F+       A  + + +   
Sbjct: 139 KIGNYDDLTGVSVGVPKSSAMDTAITAGA---GSKAKILRFDDDAANIQALISGQVEVVG 195

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           G+    Y  +L      ++    D+ +          G+ +W   V+   
Sbjct: 196 GN--QFYGDRLNQAANGKYEPKFDLTTL-YNGAGTRPGEKDWNETVNAFL 242


>gi|323490321|ref|ZP_08095536.1| extracellular solute-binding protein [Planococcus donghaensis
           MPA1U2]
 gi|323395991|gb|EGA88822.1| extracellular solute-binding protein [Planococcus donghaensis
           MPA1U2]
          Length = 279

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 83/267 (31%), Gaps = 33/267 (12%)

Query: 1   MYKDF-FVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLV 45
           M K   F+S++    +   +                  +S L  +++ G      +    
Sbjct: 1   MKKKLSFLSVIFSAGMLLAACGGDDSSSSEEGSNSDGGSSDLNLVEE-GKFTTASSGLYK 59

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F      GD  GFD+D   ALS  +  +P+ +       +     L + + D +  +  
Sbjct: 60  PFNFT-EGGDLTGFDIDISNALSEEMGLEPNPVT---TPWETILQGLTTNRFDAIIGSMA 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYF 164
            T  RE    ++F    Y+ G           I+S + L GA I V   +T +       
Sbjct: 116 ITEEREE--QVSFSDPYYYSGGVIFTKAGNTEITSEADLEGAKIGVVGQSTYDT------ 167

Query: 165 KAHNMKYHPIVFERVEEIDAAY-RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            A         +              R DA               +   E  ++ D +  
Sbjct: 168 AAQKYTDDIQYYNSDVVALQDLAIEGRLDAVITADVVG---FEAQNAGLEIEMVGDPLWI 224

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              A AI + D E    V+    A+V 
Sbjct: 225 EQAAVAINKEDEELLAAVNEALAAIVE 251


>gi|237798795|ref|ZP_04587256.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021648|gb|EGI01705.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 260

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 83/222 (37%), Gaps = 11/222 (4%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   L+ G++     F    A+G   GFD+D   A+   +       +++  +      
Sbjct: 23  KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
            L++++ D +  +   T  RE    + F    +      +  K  G++   + L G ++ 
Sbjct: 80  GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVFKKGAGLTADPASLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + GT  E           +      +   +++ A   + R DA   D+       L + 
Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195

Query: 210 RPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTHYAM 248
             +++ +   + ++   +  A  I +G+ E   ++     AM
Sbjct: 196 AGADYEVSKPVDNELLPAKTAIGIAKGNKELKALLDKGIKAM 237


>gi|294785270|ref|ZP_06750558.1| amino acid-binding protein [Fusobacterium sp. 3_1_27]
 gi|294486984|gb|EFG34346.1| amino acid-binding protein [Fusobacterium sp. 3_1_27]
          Length = 250

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 82/256 (32%), Gaps = 28/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L L  L F                  L  G N     +  +  N    GFD
Sbjct: 1   MKKIITILMLILSTLSFA--------------TKKLYVGTNAEFKPYEYL-ENNKMVGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L   +  +   I++  ++      ALQ K+ID +      T  RE ++  +   
Sbjct: 46  IELMELLGKELGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSSTPEREKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I +  G   I++ K        L G ++ VQ G+  E    D          P ++    
Sbjct: 103 IFFEGGHDVIVNDKSSFKKKEDLKGKTVGVQLGSIQEEFAKD------NGSIPKLYNNFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239
           E     +  + DA      +      T         +  I  K P A  A  + D +   
Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADAKLAK 213

Query: 240 IVSWTHYAMVTAEELG 255
             S T   +  + E  
Sbjct: 214 EFSNTILKIKNSPEYA 229


>gi|209559563|ref|YP_002286035.1| Glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes NZ131]
 gi|209540764|gb|ACI61340.1| Glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes NZ131]
          Length = 724

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 96/293 (32%), Gaps = 38/293 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V +L ++ +F T    +A  +  +          +T    F    ++  +KG D
Sbjct: 1   MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   + +   +A     A+QS Q   L   T  T  R+      F  
Sbjct: 52  VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I   S L G ++ V+ GT  +  L +Y       Y    F+  +
Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238
            +  +  A    A   D + +      N        +   +   P+      ++  + + 
Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290
            +V+  + A             +  +  D T   +  + LG D  +   +A G
Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKGLGTDDKATTSQATG 258



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 11/220 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K G ++    F      G + G D++  +A++        KI+           A+QS Q
Sbjct: 272 KIGSDSAFAPFEFQNGKGKYVGIDIELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQ 328

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       +   K I +   L   ++  + GT++
Sbjct: 329 ADGVIAGATITDARKAI--FDFSDPYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSS 386

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L +    +    +   F+    +  +  +   DA   D      LK    +      
Sbjct: 387 YSWLKENAPKYGY--NVKAFDDGSSMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFET 441

Query: 217 LPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
             + IS   +  A+ +  + E   + +    A+  + +  
Sbjct: 442 PLEGISTGEVGFAVKKGTNPELIEMFNNGLAALKKSGQYD 481


>gi|168334974|ref|ZP_02693092.1| Amino acid-binding protein [Epulopiscium sp. 'N.t. morphotype B']
          Length = 227

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 13/210 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK G N     F  ++   +  GFDVD    ++  +     +++ + +       A+ + 
Sbjct: 10  LKMGTNAAFPPFEYIEGT-EIVGFDVDLANLIAEELG---MELEIMDMEFNTLTGAVANG 65

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
            IDI       T  R     + F    +   Q  I+     I     L+  +I VQ GTT
Sbjct: 66  IIDIAVAGMTNTPER--RDSVNFSEGYFTSKQMIIVPDDSDIKVTDDLTDQTIGVQLGTT 123

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +   + Y +        + F++     A       DA   D           D      
Sbjct: 124 GDQFASMYIE----GADIVRFDKGALAIADLLNGTIDAVIIDAEPAKNFVAAQD---SLQ 176

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           IL +   +   A AI + +TE    ++   
Sbjct: 177 ILENPFVEEEYAIAIAKENTELTEQINDAL 206


>gi|238795094|ref|ZP_04638686.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia intermedia ATCC 29909]
 gi|238725589|gb|EEQ17151.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia intermedia ATCC 29909]
          Length = 260

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 13/215 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G +     F    A+G+  GFD+D  + L   I    +K  ++  +      +L++K
Sbjct: 28  VKIGTDPTYAPFESKNASGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+  +   F    Y      I  K   I  ++  L G  + V  G+
Sbjct: 85  KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIATKGSKIEPTLVALKGKRVGVLQGS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E      ++   +    + ++  + I A   + R DA   D  A     L  +    +
Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAGSEGFLKQEAGKGY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
                 +             + + D E    +   
Sbjct: 201 AFAGPSVKNDQFFGVGTGMGLRKDDAELKAALDKA 235


>gi|153811656|ref|ZP_01964324.1| hypothetical protein RUMOBE_02048 [Ruminococcus obeum ATCC 29174]
 gi|149832397|gb|EDM87482.1| hypothetical protein RUMOBE_02048 [Ruminococcus obeum ATCC 29174]
          Length = 313

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 77/256 (30%), Gaps = 9/256 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  ++  + L+    T     A+   D           +T    F     +G++ G D
Sbjct: 31  MKKMCYLLTMGLLAGSLT-VPVFAASDADSASDKKWVIATDTVFKPFEYTDDDGNFVGID 89

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++     +        L       A Q+ Q D +      T  R    G  F  
Sbjct: 90  VDVLDAIAKDQGFEYE---LKSLGWDASIAACQAGQADGMIAGASITDER-KDSGWLFSD 145

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q   + K   I     L G ++ V+ GT            +    +   +E   
Sbjct: 146 GYYNATQSMTVQKDSDIKGFDDLKGKTVGVKTGTQGATYAESLKDEYGF--NITYYEDSP 203

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE-WYN 239
            +  A    +  A   D   + +    +   +  ++       SP   AI   D +   +
Sbjct: 204 TMYQAVLGGQVVACFEDTPIMASSI-KDGDLALQILEDTANEGSPYGFAIFDADNQELLD 262

Query: 240 IVSWTHYAMVTAEELG 255
           + +     +  + E  
Sbjct: 263 MFNAGLKDIKESGEYN 278


>gi|254249775|ref|ZP_04943095.1| amino acid ABC transporter, amino acid-binding protein
           [Burkholderia cenocepacia PC184]
 gi|124876276|gb|EAY66266.1| amino acid ABC transporter, amino acid-binding protein
           [Burkholderia cenocepacia PC184]
          Length = 257

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 18/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+  L  + +   + S  A           ++ GI+           +G  KGFD
Sbjct: 1   MKR--FLVPLVFLCIGLAATSAYA------LDAHVVRLGIDPTYPPMDAKAPDGSLKGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +         + Q++ L       ALQ+++ID +  +   T  RE    + F  
Sbjct: 53  VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITAKREK--QILFSS 107

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +     G+  + + L+G  + VQ+GT  E     ++    +    + ++  
Sbjct: 108 KLFRFKSRLVARPGSGLDGTAASLAGKRVGVQSGTQFESWALAHWAPAGVG--VVPYKSQ 165

Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +++ A     R DA       +    L+    +    V  P  +    +   + Q DT  
Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRQPRGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225

Query: 238 YNIVSWTHYAMV 249
              +     +M+
Sbjct: 226 KASIDGAIASML 237


>gi|189024131|ref|YP_001934899.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus S19]
 gi|225627435|ref|ZP_03785472.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           ceti str. Cudo]
 gi|237815386|ref|ZP_04594384.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus str. 2308 A]
 gi|254689192|ref|ZP_05152446.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus bv. 6 str. 870]
 gi|254697328|ref|ZP_05159156.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254710048|ref|ZP_05171859.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           pinnipedialis B2/94]
 gi|254730226|ref|ZP_05188804.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus bv. 4 str. 292]
 gi|256031543|ref|ZP_05445157.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           pinnipedialis M292/94/1]
 gi|256159678|ref|ZP_05457431.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           ceti M490/95/1]
 gi|256254946|ref|ZP_05460482.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           ceti B1/94]
 gi|256257442|ref|ZP_05462978.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus bv. 9 str. C68]
 gi|260168675|ref|ZP_05755486.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           sp. F5/99]
 gi|260545364|ref|ZP_05821105.1| arginine/ornithine-binding periplasmic protein [Brucella abortus
           NCTC 8038]
 gi|260757918|ref|ZP_05870266.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260883720|ref|ZP_05895334.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|261222129|ref|ZP_05936410.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261317595|ref|ZP_05956792.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261758149|ref|ZP_06001858.1| arginine/ornithine-binding periplasmic protein [Brucella sp. F5/99]
 gi|265988629|ref|ZP_06101186.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
 gi|265998094|ref|ZP_06110651.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|294852304|ref|ZP_06792977.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|297248291|ref|ZP_06932009.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|189019703|gb|ACD72425.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus S19]
 gi|225617440|gb|EEH14485.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           ceti str. Cudo]
 gi|237790223|gb|EEP64433.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus str. 2308 A]
 gi|260096771|gb|EEW80646.1| arginine/ornithine-binding periplasmic protein [Brucella abortus
           NCTC 8038]
 gi|260668236|gb|EEX55176.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260873248|gb|EEX80317.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|260920713|gb|EEX87366.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261296818|gb|EEY00315.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261738133|gb|EEY26129.1| arginine/ornithine-binding periplasmic protein [Brucella sp. F5/99]
 gi|262552562|gb|EEZ08552.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|264660826|gb|EEZ31087.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
 gi|294820893|gb|EFG37892.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|297175460|gb|EFH34807.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 177

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 7/151 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
             Y    G    K   I   +   L+G +I 
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 146


>gi|148652956|ref|YP_001280049.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
 gi|148572040|gb|ABQ94099.1| extracellular solute-binding protein, family 3 [Psychrobacter sp.
           PRwf-1]
          Length = 281

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 72/232 (31%), Gaps = 12/232 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              S  T++ +L  I   G +  G       +          G+DV+  RA++  +    
Sbjct: 36  ATQSTGTDSDLLSRINSGGTINVGTEGTYPPYTYHDEQNKLTGYDVEVTRAVADKLGVK- 94

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134
             +++           L +K+ D+++     T   E            + G   +  K  
Sbjct: 95  --VEFKETQWDAMLAGLDAKRFDMVANQVSLT-TPERQAKYDKAEAYSWSGAVVLAPKSD 151

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
              +S   L G     Q+ ++    LA  ++A       +  + + +     +  R D  
Sbjct: 152 SRFNSWESLKGLKSA-QSLSSNYGELAKKYEA-----EVVPVDGMAQAVELVKQGRADFT 205

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
             D  A+          S  + L     +       +++GD      ++   
Sbjct: 206 LNDNLAVLDYLKKFPDSSLEIKLKAPAEEMTGSGLVMLKGDDAALAKINEAM 257


>gi|91778291|ref|YP_553499.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia xenovorans LB400]
 gi|91690951|gb|ABE34149.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 275

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 68/230 (29%), Gaps = 10/230 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L +   ++ +     L  +KK G L  G       F  +  NG   GF+ D    + 
Sbjct: 11  LVMLALCAASATAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEVG 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++++ L        L++ + D++      T  R       +          
Sbjct: 70  KEMGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPIADATDA 124

Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +       +   S ++G ++    G+     L  Y            +    +  A   
Sbjct: 125 LLKRANDSSLRQSSDIAGKTVGAGKGSAQLDQLKAYVATLPKPPEIREYVDNNQAYADLA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
           A R  A    ++ +    +   RP    ++          A  + +    
Sbjct: 185 AGRIVAVANSMTNIA--YVAKQRPETFAVVQPPFGAKVYFAYCLRKDADS 232


>gi|312139902|ref|YP_004007238.1| abc transporter substrate binding lipoprotein [Rhodococcus equi
           103S]
 gi|311889241|emb|CBH48555.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus
           equi 103S]
          Length = 298

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 77/254 (30%), Gaps = 21/254 (8%)

Query: 21  STNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A  L  D+   G L+ G N           +G   GFDVD   A+ + +      + 
Sbjct: 45  AAIADQLPPDVAASGELRIGTNPPYAPNEFKDESGAIVGFDVDLMEAVGAVLG---LTLD 101

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
               +  +   A+Q+  +D+   +   TL RE    + F    Y  G  +       I  
Sbjct: 102 LKQTDFDKIIPAVQAGTLDLGMSSFTDTLEREK--SVDFV-TYYSAGVQWAQRAGDDI-D 157

Query: 140 VSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                G  + VQ  T  +        A    A       I ++  +++  A    R DA 
Sbjct: 158 PDDACGLRVGVQTTTIEDIDEVPAKSAACVAAGKPPIRKIKYDSQDDVANALILGRVDAL 217

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD---TEWYNIVSWTHYA---M 248
           + D                 V    +   SP    + +G          V +        
Sbjct: 218 SADSPVTA--YAIKRSDGRMVPAGGVYDASPYGWVVAKGSPLAPVLQQAVQYLIDGGQYQ 275

Query: 249 VTAEELGITQKNIN 262
             AE  G+    I+
Sbjct: 276 AIAEAWGVEAGMID 289


>gi|258509857|ref|YP_003172608.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|257149784|emb|CAR88757.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
          Length = 484

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 21/309 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + + +S+L  + L   +       +   +K      G +     F     +  + G D
Sbjct: 1   MKRKWLLSLLIALPLMLGALI-PGKTVAAAQK--TYTIGTDVTFAPFEFANQDNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K++  PL       AL++KQID +      T  R+         
Sbjct: 58  LDLIKAIAKE---EGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPERK--QKFLMSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + KK  I S+  L G  + ++ GT +              +  + F+   
Sbjct: 113 PYYKSGVVMAVAKKSTIKSLKDLRGKRVAIKTGTDSADYANSI--KQKYGFTTVTFDDSN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A   D   +   +   +      ++     +     A  + +    + 
Sbjct: 171 NMYQDVITGNSAACFEDQPVM---QYGINNGMALKLVGKPAREGSYGFAASKNNQALISK 227

Query: 241 VSWTH--------YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            +           Y  +    LG       + +   +    + F+G+ K++      GL 
Sbjct: 228 FNTGLKKLRANGQYDKIIEHYLGNGSAESQKTAAGNSQTTDRSFIGLLKANWSTLMGGLR 287

Query: 293 KDWTYRIIR 301
           +     I+ 
Sbjct: 288 ETMVLTIVA 296


>gi|227551702|ref|ZP_03981751.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|227179143|gb|EEI60115.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
          Length = 487

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 82/243 (33%), Gaps = 13/243 (5%)

Query: 16  FFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+ S+ +  +  I+ K+       ++    F    ANG+++G DV    +++      
Sbjct: 18  TTTAESSTSETMQKIEPKKDVYVIASDSAFAPFEFQNANGEYEGIDVQLMESIAK---LQ 74

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I+           AL+S Q D +      T  R+      F    +  G    + K 
Sbjct: 75  GFNIRMDYRGFSAALQALESGQADGMIAGMTVTDERKK--SYDFSDSYFDSGIQLAVKKG 132

Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I S   L G ++  + GT +   L+D+   +        F+  +++    +    DA
Sbjct: 133 DTSIKSYEDLKGKTVGAKVGTESAEFLSDHESEYGYS--IKYFDAADQLYDGLKVGAIDA 190

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D   +        +  E     +  S    A A+ +  + E  N+ +     +    
Sbjct: 191 MMDDYPVIG---YAIKQGQELETPIEKESGGKYAFAVKKGQNPELLNMFNEGLKELKRTG 247

Query: 253 ELG 255
           E  
Sbjct: 248 EYD 250


>gi|260461731|ref|ZP_05809977.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|319785283|ref|YP_004144759.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|259032372|gb|EEW33637.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|317171171|gb|ADV14709.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 260

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 84/253 (33%), Gaps = 20/253 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61
           +          I   ++    A           +K GI       F+ + A+G W G+++
Sbjct: 2   RILSKLTAAAAIFCASTLMAQAE---------QVKVGIAAEPYPPFSSLDASGKWVGWEI 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A+ +    D       P+       +L SK+ID++  +   T  R+ +  + F   
Sbjct: 53  EIIDAICAEAKLD---CVITPVAWDGIIPSLTSKKIDVIMSSMSITEKRKKT--IDFSDK 107

Query: 122 TYFDG-QGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y D        K   I  +   L G  + +Q  T  E+  + +FK  +       ++  
Sbjct: 108 YYSDNGYTIAGPKGVTIDPTPEGLKGRILGIQVSTNAEVYASKHFK--DSLAEMKTYQTQ 165

Query: 180 EEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +E +    A R DA     ++    +K    +    +           AP    G  +  
Sbjct: 166 DEANQDLVAGRIDAILASPLTIDQFMKTDQGKACCEIKGKVANDPEIFAPGAGAGLRKGD 225

Query: 239 NIVSWTHYAMVTA 251
            ++     A +  
Sbjct: 226 TMLKEKINAAIKG 238


>gi|319940652|ref|ZP_08014995.1| hypothetical protein HMPREF9464_00214 [Sutterella wadsworthensis
           3_1_45B]
 gi|319806018|gb|EFW02776.1| hypothetical protein HMPREF9464_00214 [Sutterella wadsworthensis
           3_1_45B]
          Length = 267

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 79/255 (30%), Gaps = 24/255 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
           +K   +     +       S +A+          L+   N     F    +N G  +GF+
Sbjct: 12  FKSLSLLAAAGLCTLSLCGSVSAA---------ELRVATNPTFPPFEFQDSNTGTIQGFE 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +      ++   +       A+ S  +D+ +     T  R     + F  
Sbjct: 63  MDLVAEIAKKLG---DTVKIDKITFDGIIPAILSGSVDLGASGFSVTPER--GKKVLFSL 117

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y  G   ++ K     I+    L G  I VQ GTT+       F           F+ 
Sbjct: 118 PFYKSGLTILVPKANKAGITDFESLKGKRISVQLGTTSMQ-----FAKKIPDAEITTFDH 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEW 237
           V +      A   DA   D      +  TN         L  I +    A  + + +T  
Sbjct: 173 VGDAVLNMMAGNADAVINDKPVTDYMLHTNKSIAEGTTHLAPIATADYFAMVVAKNNTNL 232

Query: 238 YNIVSWTHYAMVTAE 252
              ++      + AE
Sbjct: 233 QQDINAALK-QLKAE 246


>gi|289625252|ref|ZP_06458206.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647249|ref|ZP_06478592.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488755|ref|ZP_07006783.1| lysine/arginine/ornithine-binding periplasmic protein precursor
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156673|gb|EFH97765.1| lysine/arginine/ornithine-binding periplasmic protein precursor
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330867263|gb|EGH01972.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330984858|gb|EGH82961.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 260

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 11/222 (4%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   L+ G++     F    A+G   GFD+D   A+   +       +++  +      
Sbjct: 23  KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
            L++++ D +  +   T  RE    + F    +      +  K  G +   + L G ++ 
Sbjct: 80  GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVFKKGAGFTADPASLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + GT  E           +      +   +++ A   + R DA   D+       L + 
Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195

Query: 210 RPSEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +++     +   +  +  A  I +G+ E   ++     AM
Sbjct: 196 AGADYEVSKPIDSELLPAKTAIGIAKGNKELKALLDKGIKAM 237


>gi|257467872|ref|ZP_05631968.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|317062161|ref|ZP_07926646.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313687837|gb|EFS24672.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 250

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L  L F +                L  G N     +  +  +G   GFD
Sbjct: 1   MKKLVLIFTLLLSTLSFAA--------------KKLYVGTNAEFKPYEYL-EDGKMVGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +     L   +  +   I+++ ++      ALQ K+ID +      T  R+ ++  +   
Sbjct: 46  IGVMDELGKKLGYE---IEWVNMSFDGLLPALQMKKIDAVIAGMSQTPERQKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I +      I+++     +   L G +  VQ G+  E        A N    P ++    
Sbjct: 103 IFFTSEHYVIVNENSTFKTKEDLKGKTAGVQMGSMQEQF------AINNGSVPKLYNTFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +  + D      ++      T DR  +   + D    + +A    + D E    
Sbjct: 157 NALMDLQNGKVDCVIIADNSGKEYLNTMDRIKKIDSIIDPKPGASIA--FRKSDKELAEK 214

Query: 241 VSWTHYAMVTAEEL 254
            S     + T +E 
Sbjct: 215 FSDAIVELKTTKEY 228


>gi|24379641|ref|NP_721596.1| putative ABC transporter, amino acid binding protein [Streptococcus
           mutans UA159]
 gi|24377594|gb|AAN58902.1|AE014958_6 putative ABC transporter, amino acid binding protein [Streptococcus
           mutans UA159]
          Length = 283

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 68/235 (28%), Gaps = 13/235 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K FF++  L L  +F  + S  +         I KRG LK      L   +    +  
Sbjct: 1   MKKHFFMTFSLLLAAVFLVACSNLSDSGQRNWDKINKRGMLKIATAGTLYPQSYHDDHNK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV+  + +   +     K+Q+  +       A++S QID+ + + +          
Sbjct: 61  LTGYDVEILKEIGKRLG---LKVQFTEMGVDGMLTAIKSGQIDVANYSLEDGNKNISKFL 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                   F           GI S S L G      A T          K    K     
Sbjct: 118 RTSPYKYSFTSMVVRSKDDSGIHSWSDLKGKKAAGAASTNYMKI----AKKLGAKLVVYD 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
               +         R D    D                 + +   +  +P + + 
Sbjct: 174 NVTNDVYMKDLVNGRTDVIINDYYLQKIAVAAVKDKYA-IKINQGLYANPYSTSF 227


>gi|257486648|ref|ZP_05640689.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331010126|gb|EGH90182.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 260

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 11/222 (4%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   L+ G++     F    A+G   GFD+D   A+   +       +++  +      
Sbjct: 23  KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149
            L++++ D +  +   T  RE    + F    +      +  K  G +   + L G ++ 
Sbjct: 80  GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVYKKGAGFTADPASLKGKTVG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + GT  E           +      +   +++ A   + R DA   D+       L + 
Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195

Query: 210 RPSEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +++     +   +  +  A  I +G+ E   ++     AM
Sbjct: 196 AGADYEVSKPIDSELLPAKTAIGIAKGNKELKALLDKGIKAM 237


>gi|160942990|ref|ZP_02090228.1| hypothetical protein FAEPRAM212_00467 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445684|gb|EDP22687.1| hypothetical protein FAEPRAM212_00467 [Faecalibacterium prausnitzii
           M21/2]
          Length = 215

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 19/222 (8%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
              N     +      G+++G DVD  +A++  +     ++Q   ++     L++Q  + 
Sbjct: 1   MATNAAFPPYEMTTDAGEFEGIDVDTAKAIAEKLG---LELQIDDMDFDAALLSVQQGKA 57

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           DI+      T  R+  +   F        Q  I+     I+S   L+G  I  Q GTT  
Sbjct: 58  DIVMAGVTVTDERKAVM--DFSDSYATGIQSIIVPNDSEIASPDDLAGKKIGTQRGTTGY 115

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           +  +D F       + + ++       A    + DA   D +   A +     P    +L
Sbjct: 116 IYCSDDFG----DENVVAYDDGLTAVQALNNGQVDAVVIDNA--PAQEFVAANPG-LKVL 168

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               ++   A  + +G +   + V+         EEL     
Sbjct: 169 DTSYAEEDYAIGMAKG-SALEDAVNKAL------EELKADGT 203


>gi|319745606|gb|EFV97907.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus agalactiae ATCC 13813]
          Length = 277

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 12/249 (4%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K      I+ + +    + S+ +      KK   +          F+ V  +G   GFD
Sbjct: 4   KKVLSVTGIILVTVASLAACSSKSHTTKTGKK--EVNFATVGTTAPFSYV-KDGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+      D  K+ +        F  + S +  +   N  ++  R  S    F  
Sbjct: 61  IEVAKAVFK--GSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSER--SQKYLFSY 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                     + K   I + + ++G    V  GTTT   L ++ K H      + +    
Sbjct: 117 PIGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKEHQKNPVTLKYTNEN 176

Query: 181 --EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
             +I       + D +           + N   +    +P  +   P       Q   + 
Sbjct: 177 ITQILTNLSDGKAD-FKLFDGPTVNAIIKNQGLTNLKTIPLTMRDQPYIYFIFGQDQKDL 235

Query: 238 YNIVSWTHY 246
              V+    
Sbjct: 236 QKYVNNRLK 244


>gi|254452220|ref|ZP_05065657.1| arginine/ornithine ABC transporter, periplasmic binding protein
           [Octadecabacter antarcticus 238]
 gi|198266626|gb|EDY90896.1| arginine/ornithine ABC transporter, periplasmic binding protein
           [Octadecabacter antarcticus 238]
          Length = 270

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 72/229 (31%), Gaps = 22/229 (9%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F      G+  G+DVD    +++ +  D   ++++         AL +
Sbjct: 27  TLRVGMECTYAPFNYRTDAGELAGYDVDVATGVAAIMGAD---LEFVCQQWDGMIPALLA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--------SSVSQLSGA 146
            + D++  +   T  R     + F           +   +  +               G 
Sbjct: 84  NKFDLIVASMSITNQR--LEKIDFSSPYRDSVGRLVGRSEANLNLFDEASNPIPENFKGL 141

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I ++  +T E     +F A       ++++  E +    R  R DA   +    +   L
Sbjct: 142 RIGIERASTYEA----WFNATLPDAETVLYDGNEPMYLDLRNGRVDAIMTNPMKAHLSFL 197

Query: 207 TNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
             +  S    +   IS+           + QG  E    +      ++ 
Sbjct: 198 ATEEGSGFEFVSPAISEIEYFGTGVGIGLRQGQPELMARLDAAIKQLIN 246


>gi|208434843|ref|YP_002266509.1| amino acid ABC transporter, periplasmic binding protein
           [Helicobacter pylori G27]
 gi|208432772|gb|ACI27643.1| amino acid ABC transporter, periplasmic binding protein
           [Helicobacter pylori G27]
          Length = 258

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 74/251 (29%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   + +   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIS--FFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 229 LINQAMQRLIN 239


>gi|194016700|ref|ZP_03055313.1| spore amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
 gi|194011306|gb|EDW20875.1| spore amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
          Length = 255

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 11/224 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +     F     +    GFDVD   AL+         ++   ++      A
Sbjct: 32  DDKTLVMATSADYPPFESKDGD-KIVGFDVDLATALAKKNGYK---LEIQDMDFASLVSA 87

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++ + DI+         R+    + F  + Y      +  K  G+ +   L   ++ VQ
Sbjct: 88  LKTNKADIVLAGMTPDEKRKK--QVDFSDVYYNAKNLVVSKKSSGMKTEKDLKDKTVGVQ 145

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  +       K +N+K       ++ +I    +A R DA   +              
Sbjct: 146 LGSIQQDEANSLQKKYNLKVEDR--NKISDIIQEIKAGRFDAAIIEDKVAAGYLKKEKDF 203

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +     + S +A    + +++     + +   M    EL 
Sbjct: 204 QAFDLSGSTNNGSAIAF---KKNSDLTAKFNKSLKEMQDNGELD 244


>gi|22537782|ref|NP_688633.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 2603V/R]
 gi|76787597|ref|YP_330258.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus agalactiae A909]
 gi|77406243|ref|ZP_00783311.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae H36B]
 gi|77408256|ref|ZP_00784999.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae COH1]
 gi|77411889|ref|ZP_00788221.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae CJB111]
 gi|22534674|gb|AAN00506.1|AE014266_17 ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 2603V/R]
 gi|76562654|gb|ABA45238.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus agalactiae A909]
 gi|77162049|gb|EAO73028.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae CJB111]
 gi|77173114|gb|EAO76240.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae COH1]
 gi|77175146|gb|EAO77947.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae H36B]
          Length = 277

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 76/249 (30%), Gaps = 12/249 (4%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K      I+ + +    + S+ +      KK   +          F+ V  +G   GFD
Sbjct: 4   KKVLSVTGIILVTVASLAACSSKSHTTKTGKK--EVNFATVGTTAPFSYV-KDGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+      D  K+ +        F  + S +  +   N  ++  R  S    F  
Sbjct: 61  IEVAKAVFK--GSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSER--SQKYLFSY 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                     + K   I + + +SG    V  GTTT   L ++ K H      + +    
Sbjct: 117 PIGSTPSVLAVPKNSNIKAYNDISGHKTQVVQGTTTAKQLENFNKEHQKNPVTLKYTNEN 176

Query: 181 --EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237
             +I       + D +           + N   +    +P  +   P       Q   + 
Sbjct: 177 ITQILTNLSDGKAD-FKLFDGPTVNAIIKNQGLTNLKTIPLTMRDQPYIYFIFGQDQKDL 235

Query: 238 YNIVSWTHY 246
              V+    
Sbjct: 236 QKYVNNRLK 244


>gi|16331349|ref|NP_442077.1| hypothetical protein slr0341 [Synechocystis sp. PCC 6803]
 gi|1001520|dbj|BAA10147.1| slr0341 [Synechocystis sp. PCC 6803]
          Length = 318

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 84/254 (33%), Gaps = 14/254 (5%)

Query: 6   FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63
            +++    +         A   L  IK  G L+  I    V F         W G  VDF
Sbjct: 21  LLTLSAWALQSLVVPPVQAETVLESIKSTGLLEVAIRDDSVPFGFRDGPANQWTGICVDF 80

Query: 64  CRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            +AL +     +   P  +++   +   R+  +  K + +          R++ L + F 
Sbjct: 81  IQALQAEVSATLGGQPLLVKFYQSSLFNRYNLVAEKVVVVECGPNTI--RRDLPLPITFS 138

Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              +  G  F++         S   L G  I V  GT+    LA  +    +  +   F 
Sbjct: 139 RPFFVTGTQFLIPADRLGSFDSDGDLRGERIGVLGGTSNSEFLAARYPEAEL-INFQGFT 197

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQGD 234
                  A    R DA+ GD   L+   L  D P   S  +  P  +        +    
Sbjct: 198 ARRLGVEALMQGRIDAFAGDGILLFGEALVLDIPLGRSYRLYPPYPLDCQGYGLILPADQ 257

Query: 235 TEWYNIVSWTHYAM 248
            EW N+V+    + 
Sbjct: 258 PEWENLVNRVVTSP 271


>gi|315925478|ref|ZP_07921689.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621379|gb|EFV01349.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 259

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 69/239 (28%), Gaps = 13/239 (5%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   F + I   + +     +  +                +T    F     NG   G
Sbjct: 1   MKKGLKFGLVIAMALAMVMAFTACGSGNSSSGSSDKKYIIATDTTFAPFEFEDKNGKRVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  +A++     D +      L       +L+S Q D +      T  R+      F
Sbjct: 61  IDMDLLKAIAKDQHFDYTV---KALGFNAAVQSLESDQSDAVIAGMSITSERKK--KFDF 115

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +  G G  +      I   S L G ++ V+ GT       +    +        FE
Sbjct: 116 SDPYFDSGVGMAVKANNTAIKDYSDLKGKTVAVKTGTEGATFANENKAKYGYS--IKTFE 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               +    ++    A   D   L              ++  + + +    A+ +G   
Sbjct: 174 DSANMYEDVKSGNSAACFEDYPVLGYAIAK---GQPLKLVGKLQAGNSYGFAVHKGKNA 229


>gi|255656165|ref|ZP_05401574.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-23m63]
 gi|296450401|ref|ZP_06892157.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP08]
 gi|296879476|ref|ZP_06903470.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP07]
 gi|296260662|gb|EFH07501.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP08]
 gi|296429622|gb|EFH15475.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP07]
          Length = 267

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 71/197 (36%), Gaps = 8/197 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L L+  F  +  ++ +     +++  ++   +     FA  + +   KGF+
Sbjct: 1   MKKIKLIIMLALVSAFLITGCSSENNKNK-EEQKTIRVATSGTYYPFAFKEKD-KLKGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF    +         ++++  +    F  L++ + D++S     T  RE      F  
Sbjct: 59  VDFWDEFAKRTNCK---VEWVLTDFSGLFGLLEADKADVVSAQLTATPEREK--KYDFSD 113

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   I+ +    I S+  L G  + V  G      L + +    +K        +
Sbjct: 114 AYNYSGTNIIVREDDTSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKIVNYSSATL 173

Query: 180 EEIDAAYRAHRCDAYTG 196
           +         R DA   
Sbjct: 174 KGNYQDLEMGRLDAVVA 190


>gi|259506394|ref|ZP_05749296.1| amino acid ABC superfamily ATP binding cassette transporter,
           secreted component [Corynebacterium efficiens YS-314]
 gi|259166035|gb|EEW50589.1| amino acid ABC superfamily ATP binding cassette transporter,
           secreted component [Corynebacterium efficiens YS-314]
          Length = 302

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 13/229 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +RG L  G N     F    ++G+  G ++D  RA++  +  D         +      +
Sbjct: 54  ERGVLTAGANPPFPPFEFKDSDGEIIGVEMDLARAMAGVMGLDYQP---QEQDFSLILPS 110

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +Q+  +D+ +        R   +   F    Y   Q      ++         G +I VQ
Sbjct: 111 VQAGTVDMGASGFTDNEER--RMNFDFIDFLYAGVQWAQSSDREEDIDPDNACGLTIAVQ 168

Query: 152 AGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
             T  E                     + ++  +    A    R DA   D         
Sbjct: 169 RTTVAETDDVRPKSEQCVAEGKEPITVLAYDTADTAATALILGRADALAADSPITAWAVA 228

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +D      ++ DI   +P   A+ + ++E   + +     ++   +  
Sbjct: 229 RSDD--RIELVGDIFMAAPFGFALPK-ESELTPVAARAFQHLIDTGDYE 274


>gi|238022193|ref|ZP_04602619.1| hypothetical protein GCWU000324_02100 [Kingella oralis ATCC 51147]
 gi|237866807|gb|EEP67849.1| hypothetical protein GCWU000324_02100 [Kingella oralis ATCC 51147]
          Length = 306

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 70/265 (26%), Gaps = 21/265 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK-----------RGFLKCGINTGLVGFAE 49
           M+K   ++          + S                              +        
Sbjct: 16  MFKKHILTATLCSAFLLAACSGGNGGASSNAGASAASSAGLDVSKTYIVATDASYPPMEY 75

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           +  +    GF  D   A + +      K++++    +  F  +     D+   +      
Sbjct: 76  MDND-HVVGFSHDILDAAAKS---QNVKLEFVNTPFEGLFANVDKGDSDVGLASITINDE 131

Query: 110 REISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R+    L F    +   Q  I        + S + L   +  VQA T+ +L L       
Sbjct: 132 RK--QQLDFSDPYFTATQMIITENKNSNAVKSFADLKNRTASVQAATSGDLILQKL--QG 187

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                   FE +            DA  GD S +      +     +V++     +    
Sbjct: 188 KDSTKIKRFETMPLAFKELETGGVDAVVGDSSVVAFYVKQHPDAKLNVVVDPSFIQEHYG 247

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAE 252
               +G ++          A + ++
Sbjct: 248 FVFKKGRSDGLREAINKGLAQIKSD 272


>gi|307728117|ref|YP_003905341.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307582652|gb|ADN56050.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 264

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 76/223 (34%), Gaps = 12/223 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NG+ +G D+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKGPNGELQGLDIDVGNAVCAAA---HMTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D ++   + T  R  ++      +     Q         + S   L G  + V   +
Sbjct: 87  RKFDAINSAMNATEQRRQTIDFT-TVVYRVPTQLIAKRDSGLLPSAEALKGKRVGVLQAS 145

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E     +++        + ++   ++     A R DA      A     L+     ++
Sbjct: 146 IQETFAKTHWEPAG--VTVVAYQDQNQVYTDLVAGRLDATLVLAPAGQTGFLSKPNGKDY 203

Query: 215 VILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             +   +         +A  I +GDT     ++    A V A+
Sbjct: 204 AFVGQPVRDDKILGSGIAYGIRKGDTALRERLNAAI-AKVQAD 245


>gi|262164525|ref|ZP_06032263.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
 gi|262026905|gb|EEY45572.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
          Length = 301

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 20/247 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 47  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 105

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G      K
Sbjct: 106 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 160

Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           K  +G S +   +     I  + G  T     + F         + F+   +        
Sbjct: 161 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 216

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244
              A            + +      +   + +SK   A A+  G+ +        I   T
Sbjct: 217 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRT 275

Query: 245 HYAMVTA 251
               + A
Sbjct: 276 ADGWLQA 282


>gi|261493365|ref|ZP_05989891.1| putative arginine ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496631|ref|ZP_05993011.1| putative arginine ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307834|gb|EEY09157.1| putative arginine ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311009|gb|EEY12186.1| putative arginine ABC superfamily ATP binding cassette transporter,
           binding protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 241

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 76/247 (30%), Gaps = 28/247 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S +    L   +                +   +      F      G+  GFD
Sbjct: 1   MKKLLLASAIAFATLSANAQE-------------TITFAMEPSYAPFETTNEKGEVIGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +AL   +    +  ++   +       L+ K  D +    D T +R+  +   F  
Sbjct: 48  VDIAKALCEEL---KATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEVRQKQVA--FTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +   ++  K K     +     ++ VQ GTT +  L+   K    +Y+   +  ++
Sbjct: 103 AYLENSVSYVAMKGKFTPETA----KNVGVQNGTTFQQYLSKNAK----QYNLKPYASLQ 154

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD   L     T          ++      +    A+ + +T   
Sbjct: 155 SAVLDLKNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALL 214

Query: 239 NIVSWTH 245
             ++   
Sbjct: 215 EKLNSAL 221


>gi|195978381|ref|YP_002123625.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein GlnP [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975086|gb|ACG62612.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein GlnP [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 713

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 16/203 (7%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +  L ++  T+   +A  +  +          +T    F    ++  +KG DVD    +
Sbjct: 1   MLAMLSVILMTAGIASAETIDIV---------SDTAYAPFEFKDSDQVYKGIDVDIINEV 51

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +     +   I            A+QS Q D L   T  T  R+      F    Y    
Sbjct: 52  AKRKGWN---INMTFPGFDAAVNAIQSGQADALMAGTTITAARQKV--FHFSDPYYDTKI 106

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                K   I   S+L G ++ V+ GT  +  L  Y K++        F+  + +  +  
Sbjct: 107 VIATRKASPIKKYSELKGKTVGVKNGTAAQAFLDKYKKSYGY--TVKTFDTGDLMYNSLA 164

Query: 188 AHRCDAYTGDISALYALKLTNDR 210
               DA   D   +         
Sbjct: 165 TGSIDAVMDDEPVIQYAINQKQD 187



 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 11/222 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
             K   ++    F     +G++ G D+D  +A++         I+           A+Q+
Sbjct: 263 VYKIVADSSFAPFEFQIGSGEYVGIDMDLIKAIAKQ---QGFTIEISNPGFDAALNAVQA 319

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R       F    Y       +     I S   L G  +  + GT
Sbjct: 320 GQADAVIAGMSITPAR--REIFDFSDSYYTSNIRLGVKSGSSIKSYKDLKGKIVGAKKGT 377

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +   L      +        F+    +  +  +   D    D      L+    R  + 
Sbjct: 378 ASYDFLESNKDIYGY--RLKAFDEASSMYDSLNSGSIDGLMDDE---AILRYAIQRGHKL 432

Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255
            I            A+ +G + E   + +    A+  + +  
Sbjct: 433 DIPIKGEPSGEYGFAVKKGANPELIEMFNNGLAALKASGKYD 474


>gi|68535730|ref|YP_250435.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium jeikeium K411]
 gi|260578185|ref|ZP_05846105.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Corynebacterium jeikeium ATCC 43734]
 gi|68263329|emb|CAI36817.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium jeikeium K411]
 gi|258603724|gb|EEW16981.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Corynebacterium jeikeium ATCC 43734]
          Length = 298

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 82/263 (31%), Gaps = 21/263 (7%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSA 70
           L          +L DI + G +  G         E   +  + G D D  R     ++  
Sbjct: 24  LTACGSGGARDLLADI-ESGHVVMGTKYDQPNLGERTPDKQFAGLDTDVSRYVVEYIAKK 82

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 +I++    + +R   + + ++++++        R     + F        Q  +
Sbjct: 83  HGWATPEIEWRETPSAQRETLINNGEVNMITATYSINKGR--LKAVDFAGPYVVTHQALL 140

Query: 131 MHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           + +  GI+ ++ +  G  +C  +G+T    + D             F+         +  
Sbjct: 141 VREDSGINGLNDIAPGTRLCSVSGSTPAQKVKDALPE----VQLQEFDTYAACAEGLKQG 196

Query: 190 RCDAYTGDISALYALKLTNDR--PSEHVILPDIISK------SPLAPAIIQGDTEWYNIV 241
             DA T D + L             ++ ++                  + +GD +    V
Sbjct: 197 VVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNENYGIGLPKGDDKAKAEV 256

Query: 242 SWTHYAMVTAEEL-GITQKNINQ 263
           +     M  + E   I  KN+  
Sbjct: 257 NEALNEMHDSGEFQKIVAKNLGD 279


>gi|325267963|ref|ZP_08134611.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Kingella denitrificans ATCC 33394]
 gi|324980566|gb|EGC16230.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Kingella denitrificans ATCC 33394]
          Length = 281

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 74/263 (28%), Gaps = 19/263 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----------FLKCGINTGLVGFAEV 50
           M    F  +    +   ++   + +   +    G                +        +
Sbjct: 1   MRTKSFSLLALAAVFTLSACGGSQNSNSNPAASGAKAAGLDVNKTYIVATDASYAPMEYM 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             N    GF  D   A + +      K++++    K  F  +     DI   +      R
Sbjct: 61  -ENNAVVGFSHDILDAAAKS---QNVKLEFVNTPFKGLFANVDKGDSDIGLASITINDER 116

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +    L F    +   Q  +   +   I + + L      VQA T+ +L L D       
Sbjct: 117 K--QQLDFSDPYFEATQMIVTTDRNANIKTFADLKTRPASVQAATSGDLILQDL--QGKD 172

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
             +   FE +        +   DA  GD S +      N     + ++     K     A
Sbjct: 173 SQNIKRFETMPLAFKELESGGVDAVVGDSSVVAYYVKQNPNAKLNTVVDPSFVKEHYGFA 232

Query: 230 IIQGDTEWYNIVSWTHYAMVTAE 252
             +G  +          A +  +
Sbjct: 233 FKKGRNDGLREAINKGLAQIKTD 255


>gi|294790681|ref|ZP_06755839.1| ABC-type amino acid transport system, secreted component [Scardovia
           inopinata F0304]
 gi|294458578|gb|EFG26931.1| ABC-type amino acid transport system, secreted component [Scardovia
           inopinata F0304]
          Length = 332

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 74/272 (27%), Gaps = 36/272 (13%)

Query: 6   FVSILCLIILFFTSFSTNASILGD-----------------------IKKRGFLKCGINT 42
            + ++CL +    S    +  L +                       ++++G L  G N 
Sbjct: 36  LIFLICLSLFLSASACGTSDGLDERGQSFDFSSIPTNKKIQSMLPQELREKGVLTVGTNA 95

Query: 43  GLVGFAEVKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                     +     G+++D  + ++  +     K Q +  +      A+  K+  +  
Sbjct: 96  AYAPAEYTGEDSRVVLGYEIDLIKGIARVMG---LKTQIVQASFNSIIPAV-GKKYTVGV 151

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL- 160
                T  RE    + F           +        +V+ L G  I VQ GT  E    
Sbjct: 152 SGFTITAEREK--SVNFVQHYRSGMSFVVNKGNPKKITVNNLCGRKISVQTGTMQETDAG 209

Query: 161 ---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
                             +        A  + + DA   D           +   +  +L
Sbjct: 210 TMSEKCLSRGKPAITIRSYRDQPSATIALISKQVDAMYTDTP--VGEYAVKETEGKLQML 267

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                 +P+   I + D      +      ++
Sbjct: 268 GKAKGVAPMGIVIAKNDMATARAIKAALQILI 299


>gi|258543770|ref|ZP_05704004.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Cardiobacterium hominis ATCC 15826]
 gi|258521006|gb|EEV89865.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Cardiobacterium hominis ATCC 15826]
          Length = 257

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 15/211 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++     L FT      S+L  I   G +  G       F     +G   G+D
Sbjct: 1   MKKWLLATL----ALAFTHAYAADSLLERINAHGTVTIGTEGTYAPFTYHDESGKLTGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  RA++  +     K+ +           L++++ D+++     T   E         
Sbjct: 57  VEVARAVADKLG---FKVDFKETAWDAMLAGLKAERFDLVANQVALT-TPERRATFDKSA 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   +       I +++ + G     Q  ++    +A    A       +  + +
Sbjct: 113 EYSYSGPMAVSRADDTRIQALADVKGLKSA-QTLSSNYGEMAKAAGA-----EIVPVDGL 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +     +  R D    D  AL         
Sbjct: 167 AQALILVQQKRADFTFNDSLALLDYLKKTPD 197


>gi|306831687|ref|ZP_07464844.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|261411856|gb|ACX81324.1| Sbs9 [Streptococcus gallolyticus subsp. gallolyticus]
 gi|304426112|gb|EFM29227.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 745

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 11/222 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
             K  +++    F     +G+++G DV+  +A++     +   ++           A+Q+
Sbjct: 289 TYKIVMDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN---VEISNPGFDAALNAVQA 345

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R+      F    Y       +     + S S L G ++  + GT
Sbjct: 346 GQADAVMAGMSITDARKEI--FDFSDAYYTSNILLAVKSGSSVKSYSDLKGLTVGAKNGT 403

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           ++   L+++   +        F+    +  +  +   DA   D      L     +  + 
Sbjct: 404 SSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQGRDF 458

Query: 215 VILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
                         A+ +  + E   + +    A+V + E  
Sbjct: 459 ETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGEYD 500



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 18/211 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       +L +  +FF       A           +    +T    F    ++  +KG 
Sbjct: 1   MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++     D  +             A+QS Q D L   T  T  R+      F 
Sbjct: 52  DVDIIKEVAEREGWDYEQ---TYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFS 106

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y              IS  SQL G ++ V+ GT  +  L ++   +        F+ 
Sbjct: 107 DTYYDTSIVVYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEHADKYGY--TVKTFDT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + ++ +  +   DA   D   +        
Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAISQGK 195


>gi|217965060|ref|YP_002350738.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes HCC23]
 gi|290892961|ref|ZP_06555951.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|217334330|gb|ACK40124.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes HCC23]
 gi|290557537|gb|EFD91061.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|307570380|emb|CAR83559.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes L99]
          Length = 480

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 96/297 (32%), Gaps = 22/297 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+    FT    NA    +         G +T    F   + +G+ 
Sbjct: 1   MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT                +  +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ D    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTDKEKGNSYGFAVNKGKN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +            + A  E     +N    +    N + + F+GI KSS      GL
Sbjct: 225 QELLEKFNAGLVNIKASGEYDKILENYLGDNAIKENTNEKGFMGIIKSSWPALLSGL 281


>gi|83748012|ref|ZP_00945042.1| ABC Transporter Amino Acid binding protein [Ralstonia solanacearum
           UW551]
 gi|207738692|ref|YP_002257085.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
 gi|83725314|gb|EAP72462.1| ABC Transporter Amino Acid binding protein [Ralstonia solanacearum
           UW551]
 gi|206592060|emb|CAQ58966.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum IPO1609]
          Length = 283

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 16/261 (6%)

Query: 2   YKDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            ++F    L     F   T+       + DIKKRG L  G       F  V  NG   GF
Sbjct: 6   RRNFLRLALGTSAAFALPTTAFAEGGSIADIKKRGKLVVGTEAAYEPFEFV-ENGQVVGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    ++  +  +  ++    L  +     L S + D ++ +   T  R       F 
Sbjct: 65  GRDILVLMADKLGVELEQMN---LPFQGLLPGLMSHKFDFVATSVSITPERAKRFA--FS 119

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-----HP 173
                     +       I+    L+G  +  Q G++++     + K    +        
Sbjct: 120 QPVGVVRPVLMARVDDTSITRDLDLAGKVLGTQMGSSSQPAAEQFEKTLKEQRGKGYADT 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +F+   ++  A      D     I +  A      +P    I+ ++     LA      
Sbjct: 180 KLFQAYPDVAIALNNKTVD--VAFIPSNVAAIQMRKQPGAFKIVGEVGQPRLLAWVANPQ 237

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           D E    ++ T   +  + +L
Sbjct: 238 DLEIRKFINDTLDELRASGKL 258


>gi|300718474|ref|YP_003743277.1| Glutamine ABC transporter, solute-binding protein [Erwinia
           billingiae Eb661]
 gi|299064310|emb|CAX61430.1| Glutamine ABC transporter, solute-binding protein [Erwinia
           billingiae Eb661]
          Length = 276

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 11/233 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + +      + + G L+         +    ANG + GFDV+F   ++  I    + 
Sbjct: 24  AASAASNDNPYGLIEPGHLRVASLGDAKPYTFTDANGQFTGFDVEFFTDVAHRIG--INN 81

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           + ++  +      A+ + Q D        T  RE    + F           +  K  G+
Sbjct: 82  VDFIGQDFAGILPAVANGQYDAGVAAIGITKARE--QTVDFSSGYLAGYLTVLTSKTSGV 139

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L+   + V  GT  E    D+FK    +   + F       +A      DA   D
Sbjct: 140 KNVDTLAKHRLAVIQGTLQESYAVDHFK----QTDLVRFPDNNAAISAMNNGTVDAVFLD 195

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                + K   DR             +P   AI +    +   +     + + 
Sbjct: 196 ---YESAKTYADRYDLIHAADIPSFDAPAGFAIAKNKVAFKTALDKAIKSAME 245


>gi|218709146|ref|YP_002416767.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           splendidus LGP32]
 gi|218322165|emb|CAV18279.1| Lysine-arginine-ornithine-binding periplasmic protein [Vibrio
           splendidus LGP32]
          Length = 257

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 21/248 (8%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   ++   +     F    ++G   GFD++   AL      D     ++  +      +
Sbjct: 20  QAKEIRLASDFTYPPFNYKNSDGVPVGFDIEIADALCEQAKLD---CTWVSQSWDSLIPS 76

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150
           L +++ D++  +   T  R+    + F    Y     F+  K    S     L+G +I V
Sbjct: 77  LLARKSDVIMASMRITEERKR--KILFTDKYYQTPAVFVAAKSAEFSIDEAGLAGKTIGV 134

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GT  +  + D F       +   +   +E+    +  R D   G+   L    L    
Sbjct: 135 QQGTIHDRYVTDKF---GDVANIKRYTGQDEVYLDMQNGRLDLTFGNSDQLSLAFLDKKE 191

Query: 211 PSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
                     ++         A A+ + D++     +         EE+       ++++
Sbjct: 192 GEGFEFKGKAVTDKAYIGEGTALALRKQDSKLAKQFNAAI------EEIRANGT-YDKIA 244

Query: 266 KDTTNPDV 273
                 D+
Sbjct: 245 AKYFTFDI 252


>gi|312865925|ref|ZP_07726146.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
 gi|311098329|gb|EFQ56552.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
          Length = 273

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 20/256 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKA 52
            K     +L L+ +   + S +A      S L D++KRG L    +     F     V  
Sbjct: 4   KKIVTAVLLVLLSVSLVACSNSAKSTKTDSSLSDVQKRGTLVVATSPDFAPFEFKRLVNG 63

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G DV+  + ++  +     KI +L ++      ++   + D        T   + 
Sbjct: 64  RDTVAGVDVELSKEIAKEL---HVKIHFLTVSFTNVLGSVAIGKADYGISGISVTE--DR 118

Query: 113 SLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                F    +      ++ K      +SV   +G S+  Q GT  E  LAD        
Sbjct: 119 KNSFEFTEPYFESKNVVVIRKADLAKYTSVDSFAGKSVSAQKGTIQEGVLADQIPKA--- 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +   +  E     ++ +      + +       +N   +   I    +  S  A A+
Sbjct: 176 -SAVSLTQNSEGVNELKSGKIQGIVMESAIAQGYINSNKDLTLAKITLKKVDGSSYAIAL 234

Query: 231 IQGDTEWYNIVSWTHY 246
            +G     N ++    
Sbjct: 235 PKGSIALRNKLNSIIT 250


>gi|238795813|ref|ZP_04639326.1| Arginine-binding periplasmic protein 1 [Yersinia mollaretii ATCC
           43969]
 gi|238720276|gb|EEQ12079.1| Arginine-binding periplasmic protein 1 [Yersinia mollaretii ATCC
           43969]
          Length = 243

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 78/216 (36%), Gaps = 18/216 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +  D     +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEMQAD---CTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTKPYYDNSALFIAEKG-KVADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L       + +   + ++  +      +  R DA  GD + +        + ++ 
Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEW---LKQNNQL 188

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
             + D ++ +         A+ Q +TE    +    
Sbjct: 189 AAVGDKVTDADYFGTGLGIAVRQTNTELLGKLDAAL 224


>gi|296102391|ref|YP_003612537.1| extracellular solute-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295056850|gb|ADF61588.1| extracellular solute-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 257

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 80/251 (31%), Gaps = 25/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V  + L+  F +  +T             L+ G+      F    A+G+ +GFD
Sbjct: 1   MKLRALVVGMGLLCTFSSFAAT------------ELRYGLEAEYPPFESRNASGELEGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A+  A      K  ++  +       L +K+ D ++   + T  R     + F  
Sbjct: 49  VELGNAICKAA---ALKCTWVETSFDALIPGLVAKKFDAINSAMNITEQRRK--SIDFTQ 103

Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +      +  +   L G +I V  G+  E    ++++        + ++  
Sbjct: 104 PIYRIPSQLVGKAGTAVEATPEGLKGKTIGVLQGSIQETYAKEHWEKQG--VTVVSYKDQ 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
                     R DA     +A  A  L+  +      +   +S        +   + +GD
Sbjct: 162 NMAWGDLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGD 221

Query: 235 TEWYNIVSWTH 245
                 +    
Sbjct: 222 EATKKQLDAAI 232


>gi|257875562|ref|ZP_05655215.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257809728|gb|EEV38548.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 712

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 73/252 (28%), Gaps = 20/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       I+ +  L   S S   +           K G +     F     N ++ G D
Sbjct: 1   MSFALIALIISIFTLSVKSASAEETTY---------KIGTDLTFAPFEFQNENNEYVGID 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++         +   PL        +QS Q+D +      T  R+ +    F  
Sbjct: 52  IDLLNAIAED---QGFAVDLRPLGFDASIQGVQSNQLDGMIAGMSITDERKET--FDFSD 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    +      I+S   L G ++  + GT +   L +    +            
Sbjct: 107 PYFDSGIQMAVAADNDSITSYEDLEGETVGAKVGTESARFLEENKDQYGYDIKL-----Y 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++    Y A R             L    +      ++ +    +    A+ +G  +   
Sbjct: 162 DDATGLYGAVRNGTVAAAFDDYPVLGYAINNGEPMKLVGEPEKGASYGFAVRKGQNQELL 221

Query: 240 IVSWTHYAMVTA 251
                  A + A
Sbjct: 222 EKFNAGLANMKA 233



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 78/243 (32%), Gaps = 15/243 (6%)

Query: 18  TSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           T+  ++A     +K   K+   +   ++    F     + ++ G DVD     ++ +   
Sbjct: 246 TTSDSDADTSEMVKVEPKKDVYRIASDSAFAPFEFQNEDNEYVGIDVDLMNR-AAELQG- 303

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
              I++  +       AL   Q D +      T  R       F    +  G    + + 
Sbjct: 304 -FNIEFNFIGFSGALQALDGNQADGMIAGMTITDER--RQSYDFSDSYFESGIQIAVKEG 360

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+S   L G ++  + GT +   L    + +        ++  +++ AA    + DA
Sbjct: 361 NDSINSYEDLDGKTVGAKVGTESADFLIANEEKYGYS--IKYYDAADQLYAAVNGGQIDA 418

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D   +        +    V   +  S      A+ +  + E   + +     M    
Sbjct: 419 MMDDYPVIGYAISQGQK---LVTPIEKESGGQYGFAVKKGQNPELIQMFNEALKEMKRTG 475

Query: 253 ELG 255
           E  
Sbjct: 476 EYD 478


>gi|325978626|ref|YP_004288342.1| amino acid ABC transporter amino acid-binding/permease
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178554|emb|CBZ48598.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 745

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 11/222 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
             K  +++    F     +G+++G DV+  +A++     +   ++           A+Q+
Sbjct: 289 TYKIVMDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN---VEISNPGFDAALNAVQA 345

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R+      F    Y       +     + S S L G ++  + GT
Sbjct: 346 GQADAVMAGMSITDARKEI--FDFSDAYYTSNILLAVKSGSSVKSYSDLKGLTVGAKNGT 403

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           ++   L+++   +        F+    +  +  +   DA   D      L     +  + 
Sbjct: 404 SSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQGRDF 458

Query: 215 VILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255
                         A+ +  + E   + +    A+V + E  
Sbjct: 459 ETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGEYD 500



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 18/211 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       +L +  +FF       A           +    +T    F    ++  +KG 
Sbjct: 1   MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD  + ++     D  +             A+QS Q D L   T  T  R+      F 
Sbjct: 52  DVDIIKEVAEREGWDYEQ---TYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFS 106

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y              IS  SQL G ++ V+ GT  +  L ++   +        F+ 
Sbjct: 107 DTYYDTSIVVYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEHADKYGY--TVKTFDT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            + ++ +  +   DA   D   +        
Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAISQGK 195


>gi|33597553|ref|NP_885196.1| glutamine ABC transporter periplasmic protein [Bordetella
           parapertussis 12822]
 gi|33601952|ref|NP_889512.1| glutamine ABC transporter periplasmic protein [Bordetella
           bronchiseptica RB50]
 gi|33573981|emb|CAE38300.1| glutamine-binding periplasmic protein precursor [Bordetella
           parapertussis]
 gi|33576390|emb|CAE33468.1| glutamine-binding periplasmic protein precursor [Bordetella
           bronchiseptica RB50]
          Length = 250

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L           + AS          L    +T  V F   + N  + GFD
Sbjct: 1   MIKAKVAAVLIGASAALLGAVSTASAQDK-----ELVVATDTAFVPFEFKQGN-TYTGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K +  P++       LQ+K ID            +    + F  
Sbjct: 55  IDLWAAIAKEL---NLKYKLQPMDFNGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 109

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +  K   I     LSG S+ V+ GT T     D+ K+        +F  +
Sbjct: 110 PYYESGLAILVSEKNDSIKEAKDLSGKSVAVKTGTATV----DFMKSQVPDAKLKLFPNI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T  +     ++  + S      A  +G +E   
Sbjct: 166 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGTVKSGDFYGIAFPKG-SELVP 223

Query: 240 IVSWTH 245
            V+   
Sbjct: 224 QVNKAL 229


>gi|312171872|emb|CBX80129.1| glutamine ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 249

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 12/214 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L    +T  V F   +  G + GFD+D   A++  +  +       P++      ALQ
Sbjct: 26  KKLVVATDTAFVPFEFKQG-GQYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPALQ 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           ++ ID+       T  R+    +AF    Y  G   ++      +  +  L+G  + V++
Sbjct: 82  TRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVKANNDAVKGIEDLNGKVVAVKS 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT +      + K          F  ++         R DA   D   +     T  +  
Sbjct: 140 GTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTSRADAVLHDTPNILYFINTAGKG- 194

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +   + + I       A  +G  +    V+    
Sbjct: 195 QFKAVGNSIEAQQYGIAFPKGSDDLREKVNGALK 228


>gi|325964295|ref|YP_004242201.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470382|gb|ADX74067.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 267

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 83/242 (34%), Gaps = 21/242 (8%)

Query: 10  LCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             +  L  T+    +S          +   G L    +     F   + +G   GFDVD 
Sbjct: 19  FAVGALTLTACGGGSSTPAASEGGIQLINAGKLTVCSDIPYEPFEF-EKDGQTVGFDVDI 77

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L+   F     I      A E   AL   Q D+   +   T  R+  +   F     
Sbjct: 78  AKELAKD-FGAELSIVDSSFEAIETGTALT--QCDLGISSISITDTRKSVM--DFSTPYL 132

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            D    +  +  GISS+    G  + VQ  TT     ADY +   +      FE    + 
Sbjct: 133 DDDLALVASEDSGISSLDDAKGKKVGVQQATTG----ADYAEEQGIDAQ--QFEDTGLLV 186

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A +A   DA  G+ S L       D P     + +  +   L  ++ +G+T     V+ 
Sbjct: 187 QALQAGTIDAALGNQSVL--GYAIKDNPK-FKSVEEFATGEQLGISVKKGNTAMLEKVNA 243

Query: 244 TH 245
           T 
Sbjct: 244 TL 245


>gi|322805717|emb|CBZ03282.1| cystine ABC transporter, periplasmic cystine-binding protein FliY
           [Clostridium botulinum H04402 065]
          Length = 272

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 16/202 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51
           M K       VS L +IIL        A+   +      K    +  G +     +   +
Sbjct: 1   MKKKKLSLILVSALAVIILLAGCGKEKATSTEEQNTGNSKSEKKIIVGTSPDYYPWCYTE 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           A G  +GF++D    +      D   I++        F  L + QID ++     T  R 
Sbjct: 61  A-GKLQGFEIDVWNEIGKKAGYD---IEFKQSKFSGLFGMLDAGQIDTVAHQISTTEERR 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F     + G  F+++K K I S+  L G  +    G   E TL    +   +  
Sbjct: 117 K--KYDFTETYAYSGYSFVVNKDKDIKSLEDLKGKKVGCTLGGNGEKTLKKLNEEKGLNI 174

Query: 172 HPIVFERVEEIDAAYRAHRCDA 193
             + +++   ++      R DA
Sbjct: 175 KVLTYDQTP-MEKDVEIGRLDA 195


>gi|294673059|ref|YP_003573675.1| cyclohexadienyl dehydratase [Prevotella ruminicola 23]
 gi|294472731|gb|ADE82120.1| cyclohexadienyl dehydratase [Prevotella ruminicola 23]
          Length = 274

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 86/259 (33%), Gaps = 21/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49
           M K   + +  +++    SF++           N   +  I++RG +  G          
Sbjct: 1   MRKFILLFLSAVLLGSMVSFASCTVGKDNTIIVNQPTINRIQERGTILIGTTGDYRPLTF 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ--IDILSRNTDWT 107
            +A+G + GF ++    ++  +  +   IQ++P +       + S     D+       T
Sbjct: 61  READGTYWGFGIEVAGQIAKRLGVN---IQFVPTSWPTLSTDVTSNPQAFDLAIGGITIT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+ ++ +        +G+  +           +L+               L + F   
Sbjct: 118 DARKQTMLM--SDGYLANGKTILCRA-SEADRYQKLADIDKPDVRVMVNPGGLNEKFANQ 174

Query: 168 NMKYHPIVFERVEEIDAAYRA-HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           N+ +  I+     E   +  A  + D    +I+       T+ R     +L    +   +
Sbjct: 175 NLTHATIIVHDKNEEIPSLIAEGQADVMITEITEAPYYIQTDTR-LAAPLLNAPFTHGEI 233

Query: 227 APAIIQGDTEWYNIVSWTH 245
              + QG  +   +V+   
Sbjct: 234 GVLMRQGQDDLLQLVNDVI 252


>gi|261838313|gb|ACX98079.1| amino acid ABC transporter, periplasmic binding protein
           [Helicobacter pylori 51]
          Length = 258

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 76/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIS--FFGGFLNASSLYERLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++   + T  ++         
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDMMLTGLKSGRFDMVANQVNLT-TKKRQATFDKSL 114

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228

Query: 240 IVSWTHYAMV 249
           +++     ++
Sbjct: 229 LINQAMQRLI 238


>gi|241762904|ref|ZP_04760967.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241368079|gb|EER62284.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 278

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 16/244 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +   + L  IK+RG +  G+      F  +   N    G++ +  RA++  +  +   +Q
Sbjct: 25  AHADATLDKIKQRGKVTIGVLVNGGPFGSIDPANQQLVGWNPELARAVAKGLGAEAELVQ 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              +    R   LQ+ ++D+L  + +    R  +LG A  P     G   +  K  GIS 
Sbjct: 85  ---VQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPFYRVGGTAAV-RKDSGISK 140

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G  +C+  G++    L     A++       F+   +   A +   C A   D +
Sbjct: 141 WDDLRGKPVCISQGSSFAKPL-----ANDYGAQVQGFKSSSDSLLALKGGTCVAAVHDST 195

Query: 200 ALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-----AMVTAEE 253
            ++ L  +N   S++   +   I  +P      +G+ +    V            + A E
Sbjct: 196 LIHPLLRSNPEWSQYSAPIATEILPAPSVVWTRKGEADTIAAVDKVVQDWHRTGWLIATE 255

Query: 254 LGIT 257
             + 
Sbjct: 256 KRVG 259


>gi|238892648|ref|YP_002917382.1| putative arginine-binding periplasmic protein [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238544964|dbj|BAH61315.1| putative arginine-binding periplasmic protein [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 243

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 74/219 (33%), Gaps = 11/219 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G  T    F          GFD+D   AL   +    ++ Q+          AL+ 
Sbjct: 22  TLHFGTTTANPPFVTANGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    +   +RE  +   F         G ++  K    S + L    + V  GT
Sbjct: 79  KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVLVNKDVAHSFADLKAKKVGVVKGT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212
             +  L D  KA       + ++ V    AA +A +     GD + L A +  N      
Sbjct: 137 LHQRYLRDKQKA----VQAVPYDDVASALAALKAGQITGVMGDFATLDAWQQENPDYAIM 192

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           +             A A+ + D E  N ++    A++  
Sbjct: 193 DERATDPAYYGKQYAIAVRKDDPELLNAINDALAAVMAT 231


>gi|157369069|ref|YP_001477058.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157320833|gb|ABV39930.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 256

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 81/250 (32%), Gaps = 16/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +   CL      S                   G       F    ++   +GFD
Sbjct: 1   MLKRIILIGACLAATLSASALAAEPTY---------VVGSGGTYRPFEFENSSKQLEGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +  +++ +    +  F  L S   DI+      T  R+    + F  
Sbjct: 52  IDIIKAVAKA---EGFQVKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++ K   ++S++ L    + V   +T ++ ++D    +        F+   
Sbjct: 107 PYFPAEQTIVVPKDSQVNSIAALKALKVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+        T+      ++      +     A+ +G+ E    
Sbjct: 165 LLLQELYEDGIGAAVGDVGVAKFYIKTHPEKEFKLVSDAKFERQYFGIAVAKGNDELRGK 224

Query: 241 VSWTHYAMVT 250
           ++     ++ 
Sbjct: 225 INAGLKKIIA 234


>gi|307300618|ref|ZP_07580393.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306904152|gb|EFN34737.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 296

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 17/230 (7%)

Query: 17  FTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
            T+ + +A    DI     +  G +K   +     F  V   G+  GF+VD   A++  +
Sbjct: 25  LTTGAVHAQTAADILPQIYRDAGVIKLVTDAKYPPFQSVNDAGEIVGFEVDLWNAIADRL 84

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFI 130
                K+    ++       +Q+ + DI          R+    ++F            +
Sbjct: 85  ---NVKVDVTSVSFDSLIPGVQAGRWDIAMEGITDNAERQKV--VSFVDYGYTTSSAYVL 139

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAA 185
             K   I     L G     Q+GT     +A         A   K     F   E    +
Sbjct: 140 EQKGSEIKDHLGLCGLKGSAQSGTEWVGMIAKEIGDACVAAGKDKPSVSEFGTSEATLLS 199

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             + R D      +    ++     P + + +  I+ + P   A  + +T
Sbjct: 200 LYSGRSDFVLTSAALAGEIQKVAPHPVKVIPMQ-ILPRMPSGIAFRKDET 248


>gi|326804125|ref|YP_004321943.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650324|gb|AEA00507.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 505

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 83/271 (30%), Gaps = 37/271 (13%)

Query: 1   MYKD---FFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLV 45
           M K    F   +L L  L                  +  S+L  IK RG L+ G++    
Sbjct: 4   MKKLSHCFLAVLLMLTTLSGLLAPQVYGEEDKGQAPSENSLLQSIKDRGELRMGVSPDYP 63

Query: 46  GFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
            F             G D++  + ++  +    + +    +       ++++  IDI+  
Sbjct: 64  PFEFITMKDGQQTVAGADIELGQKIADDLGVKLNVVT---MEFSSLLSSMEAGNIDIIIS 120

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELT 159
              +T  R     + F      D Q  I+ K          S     ++  Q G+  E  
Sbjct: 121 GMGYTEERAK--SVDFSDGYQNDEQAIIIRKDDAEKIHDKDSFTPDMTVGYQQGSIQEGL 178

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE----HV 215
             +              +++ ++ +A    + D    D     A    ++   E    H 
Sbjct: 179 ANEQMPHVGKH----AMQQLPDLISALLTGQIDGVIIDSGVGGAHVRAHEDALEMINGHF 234

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            L D  SK      + +   +    ++ +  
Sbjct: 235 KLEDDNSKR---VVMPKNQPDLQAAINQSVQ 262


>gi|325674218|ref|ZP_08153907.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Rhodococcus equi ATCC 33707]
 gi|325554898|gb|EGD24571.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Rhodococcus equi ATCC 33707]
          Length = 298

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 77/254 (30%), Gaps = 21/254 (8%)

Query: 21  STNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A  L  D+   G L+ G N           +G   GFDVD   A+ + +      + 
Sbjct: 45  AAIADQLPPDVAASGELRIGTNPPYAPNEFKDESGAIVGFDVDLMEAVGAVLG---LTLD 101

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
               +  +   A+Q+  +D+   +   TL RE    + F    Y  G  +       I  
Sbjct: 102 LKQTDFDKIIPAVQAGTLDLGMSSFTDTLEREK--SVDFV-TYYSAGVQWAQRAGDDI-D 157

Query: 140 VSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                G  + VQ  T  +        A    A       I ++  +++  A    R DA 
Sbjct: 158 PDDACGLRVGVQTTTIEDIDEVPAKSAACVTAGKPPIRKIKYDSQDDVANALILGRVDAL 217

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD---TEWYNIVSWTHYA---M 248
           + D                 V    +   SP    + +G          V +        
Sbjct: 218 SADSPVTA--YAIKRSDGRMVPAGGVYDASPYGWVVAKGSPLAPVLQQAVQYLIDGGQYQ 275

Query: 249 VTAEELGITQKNIN 262
             AE  G+    I+
Sbjct: 276 AIAEAWGVEAGMID 289


>gi|288960749|ref|YP_003451089.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288913057|dbj|BAI74545.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 282

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +    L++    + +  A  L D+KK G            F  +  N ++KG D
Sbjct: 11  MFKTALLGA-TLLVAGAAAGTAMADTLADVKKAGVFTVATEMQFPPFDFL-ENNEYKGVD 68

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +       +Y+ L        L++K+ D++      T  R      +F  
Sbjct: 69  KDLFDEVAKELGVKA---KYIDLPWTSVLPGLEAKKFDLVIAPVTITKER--MKRYSFTV 123

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    +       I+    ++G  +    GT+    + ++ +          +   
Sbjct: 124 PISEATAALMKRADDKTITKPEDIAGKKVGGGKGTSQLAQVKEFGQTLPTPPDVREYVDS 183

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QGDTEW 237
            +  A   A R DA    +  L          +  V+LP     S  +        D   
Sbjct: 184 NQSYADLAAGRVDASVNSLPNLNFAAAQRKD-TFAVVLPPFGKPSYFSWVGRPGGDDKSL 242

Query: 238 YNIVSWTH 245
              V+   
Sbjct: 243 IEAVNAAL 250


>gi|15645556|ref|NP_207732.1| amino acid ABC transporter, periplasmic binding protein (yckK)
           [Helicobacter pylori 26695]
 gi|2314078|gb|AAD07985.1| amino acid ABC transporter, periplasmic binding protein (yckK)
           [Helicobacter pylori 26695]
          Length = 256

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 74/251 (29%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L+I FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFL----LVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD-WTLLREISLGLAFR 119
           V+  R L+  +      I++   +       L+S + D+++      T  R+ +   +  
Sbjct: 57  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLATKKRQAAFDKSLP 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +   +  I  +  + G        +T          A       +  + +
Sbjct: 114 YSYSGTIM-LVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 167 AQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALE 226

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 227 LINQAMQRLIN 237


>gi|160901197|ref|YP_001566779.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160366781|gb|ABX38394.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 308

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 81/231 (35%), Gaps = 15/231 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             + L  IK+RG L  GI+     F  +    G   G+  +    ++  +      +   
Sbjct: 27  ADATLDKIKQRGKLSVGIDGASPPFGVLDPATGKTGGYQTELAADIARRLGVPLETVP-- 84

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            + A  R   LQS ++D+L  N  WT  R   L  A  P     G G ++ K  GI    
Sbjct: 85  -VTASTRVQFLQSGKVDLLIANIQWTQERSEILSFAPTP-YDLIGGGALVAKASGIKRWE 142

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G   CV  G+     LA+ + A            + E   A +   C A      AL
Sbjct: 143 DLRGKVACVSQGSNFAKPLAESYGA-----VVKGLRGIPESLLALKGGTCAASVHIQPAL 197

Query: 202 YALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           Y  KLT    +E         D +  SP      +G+T+    V       
Sbjct: 198 Y-EKLTGPNAAEWKDFELGTQDQLIPSPTVVWTRRGETDTQAFVDKAIQDW 247


>gi|78046209|ref|YP_362384.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|78034639|emb|CAJ22284.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
          Length = 266

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 82/255 (32%), Gaps = 8/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++  L+       +T AS L  + + G L+         ++ ++ +G ++G D
Sbjct: 10  MRHRICLAL--LLSCGTAHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRGDGQFEGSD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  ++L++++    ++++ +  +  +    L + + DI       TL R+     +   
Sbjct: 68  IDLVQSLAASL---DARVRLVRTSWPQLMPDLLADRCDIAVGGISVTLQRQRQASFSAVL 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                        +    S+ QL+   + +            +      +    +F    
Sbjct: 125 DVDGKIPLVRCADQARYRSLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQATLRLFADNT 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I     AHR D    D S     +              +      A  + + D  W   
Sbjct: 183 TIFQELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAY 241

Query: 241 VSWTHYAMVTAEELG 255
           V    +    + +  
Sbjct: 242 VDQWLHLSKASGDYQ 256


>gi|283457454|ref|YP_003362031.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Rothia mucilaginosa DY-18]
 gi|283133446|dbj|BAI64211.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Rothia mucilaginosa DY-18]
          Length = 279

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K G L    NT    F   + NG   G D D   A++S +               +    
Sbjct: 45  KSGTLSVCTNTPYKPFEY-EENGTIVGLDADIANAIASDLGVKAQLTSISF-EGLDSGTG 102

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + Q DI       T  R+    + F  + + D    ++ K   I+S + L G ++  Q
Sbjct: 103 LATGQCDIALAGIGVTDERKS--KMEFTTVYFDDNLAILVPKGSSITSAADLKGVAVGAQ 160

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T+ E    +           I +E    + +A +  +  A   ++S +      +   
Sbjct: 161 QATSGETYAKE------NGAEVIQYEDTSLMFSALKTGQVKAVAANLSVVSEALTNDPN- 213

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S  +   D  +   +A A+   +       + T   +    EL 
Sbjct: 214 SFKIAYQDSENTEQIAAAVSSNNKALLAKANSTITKLKENGELD 257


>gi|257869222|ref|ZP_05648875.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257803386|gb|EEV32208.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 718

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 74/241 (30%), Gaps = 23/241 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M + +    L  +I  F +F+    + A            K G +     F       ++
Sbjct: 1   MKRKYMFCALFSVIFCFFAFANKPVSAAET--------TYKIGTDLTFAPFEFQNEKNEY 52

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D   A++         +   PL        +QS Q+D +      T  R+ +   
Sbjct: 53  VGIDIDLLNAIAED---QGFAVDLRPLGFDSSLQGVQSNQLDGMIAGMSITDERKET--F 107

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    + K  + I + + L   ++  + GT +   L    K +        
Sbjct: 108 DFSDPYFDSGIQMAVAKDNQDIKTYADLKDKTVGAKVGTESARFLETNQKKYGYS--IKN 165

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++    +  A R     A   D      L           ++ +    +    A+ +G  
Sbjct: 166 YDDASGLYGAVRNGTVVAIFDDYPV---LGYAISNGEAMKLVGEPEKGASYGFAVKKGQN 222

Query: 236 E 236
            
Sbjct: 223 S 223



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 80/253 (31%), Gaps = 19/253 (7%)

Query: 9   ILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           I+   I    S S  AS +  ++ K+   +   ++    F     + ++ G DVD     
Sbjct: 245 IIATYIASSESTSDEASEMVKVEPKKDVYRISSDSAFAPFEFQNEDNEYVGIDVDLLTR- 303

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +      I++  +       AL   Q D +         R+      F    +  G 
Sbjct: 304 AAEMQG--FNIEFNFIGFSGALQALDGNQADGMIAGMSINDERKK--AYDFSDSYFESGI 359

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              + +    I S   L G ++  + GT +   L +    +        ++  +++ AA 
Sbjct: 360 QIAVKEGNDSIKSYEDLEGKTVGAKVGTESADFLIENEDKYGY--TIKYYDAADQLYAAV 417

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS---PLAPAIIQ-GDTEWYNIVS 242
              + DA   D   +        +      L   I K        A+ +  + E   + +
Sbjct: 418 SGGQIDAMMDDYPVIGYAISQGQK------LSTPIEKEVGGQYGFAVKKGQNPELIQMFN 471

Query: 243 WTHYAMVTAEELG 255
                M    E  
Sbjct: 472 EALKEMKRTGEYD 484


>gi|19704135|ref|NP_603697.1| amino acid-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19714345|gb|AAL94996.1| Amino acid-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 230

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 76/225 (33%), Gaps = 15/225 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K   +  G N     F  +       GFD+D   A+S        + +   +       A
Sbjct: 12  KSNVVYVGTNAEFAPFEYLD-KNKIVGFDIDLLDAISKETG---LEFKIQDMAFDGLLPA 67

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150
           LQ+K++D++      T  R+ ++   F    +   Q  I   + K + S   LSG  + V
Sbjct: 68  LQTKKVDMVIAGMTATPERQKTVA--FSKPYFKAKQVVITKGENKSLKSFKDLSGKKVGV 125

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G T +  +++             F        A   ++ DA   D     A K T + 
Sbjct: 126 MLGFTGDTVVSEI-----KGVKIERFNAAYAAILALSQNKIDAVVLDSE--PAKKYTANN 178

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + VI      +   A A  + D E  N V+     +    E  
Sbjct: 179 -KQFVIANIPAEEEDYAIAFRKNDKELINKVNVALDKIKANGEYD 222


>gi|297579918|ref|ZP_06941845.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297535564|gb|EFH74398.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 278

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 20/247 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + + N   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVANNTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G      K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137

Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           K  +G S +   +     I  + G  T     + F         + F+   +        
Sbjct: 138 KLAEGFSKLEDFNKRDVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244
              A            + +      +   + +SK   A A+  G+ +        I   T
Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRT 252

Query: 245 HYAMVTA 251
               + A
Sbjct: 253 ADGWLQA 259


>gi|296332696|ref|ZP_06875156.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305673040|ref|YP_003864712.1| putative ABC transporter binding lipoprotein [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296149976|gb|EFG90865.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305411284|gb|ADM36403.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 283

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 70/255 (27%), Gaps = 16/255 (6%)

Query: 3   KDFFVSILCLIILFFTSF-----STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN--- 53
           K    S      L   +      + +       IK +G +    +  L   +    +   
Sbjct: 4   KAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSYHDTDSGS 63

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G++V+  R  +  +     K+++  +       A+ S Q+D  + + D T  RE  
Sbjct: 64  DKLTGYEVEVVREAAKRLG---LKVEFKEMGIDGMLTAVNSGQVDAAANDIDVTKDREKK 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              +      +           GI ++  L G      A T       D  + +  +   
Sbjct: 121 FAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTVYM----DVARKYGAQEVI 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                 E+        R D    D              +  +        +  A  + + 
Sbjct: 177 YDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQALVMKKS 236

Query: 234 DTEWYNIVSWTHYAM 248
           +      ++ T   M
Sbjct: 237 NAALQKKMNETLKEM 251


>gi|326315179|ref|YP_004232851.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323372015|gb|ADX44284.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 255

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++    +    +FS  A  +  I+K G +          F   K   +  GF+
Sbjct: 1   MK--ILKTMATAAVALCAAFSAQARPIDAIQKDGKIIIATEGQFAPFNYFKGT-ELTGFE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +     K+++  L        L   + D+   +   T  R  S  + F  
Sbjct: 58  VEVANLVAKKM---NLKVEWKTLGFDALLTGLAQDRWDVAIASHGVTEER--SKAVTFAT 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++   G ++     I +   L+G  + VQ GT+    +               F    
Sbjct: 113 P-HYCSGGMVISMDPAIRAGKDLAGKVVAVQTGTSYLENVKKVPGVK----DVKNFPTDV 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  +A  + R DA+  D     A ++    P   + L D++    +APA+ +G+T   + 
Sbjct: 168 DARSALTSKRVDAWVTDK--FVAKEVAAKNPKAGLKLGDMLFIEKIAPAVAKGNTGLADA 225

Query: 241 VSWTHYAMVTAE 252
            +   +A + A+
Sbjct: 226 WNKA-FAEILAD 236


>gi|251781795|ref|YP_002996097.1| ABC transporter substrate-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390424|dbj|BAH80883.1| ABC transporter substrate-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 280

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 78/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++ +  + +      +   S      + G       +          F+  +  G
Sbjct: 1   MIKKQYLGMATITLASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G +  V  GTT+   L D+ K H+     +
Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            F      ++       + D    D   + A  + N        +    ++ P +     
Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFS 232

Query: 232 QGDTEWYNIVSW 243
           Q   +  + V+ 
Sbjct: 233 QDQEKLQSFVNK 244


>gi|304415311|ref|ZP_07395996.1| permease component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
 gi|304282829|gb|EFL91307.1| permease component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
          Length = 509

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 83/241 (34%), Gaps = 28/241 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  I     +       L        ++  +      F  V  N + +GFD
Sbjct: 1   MKKLIITVFLISISFSIYA-------LD------TVRFAMEASYPPFEFVGKNNEIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +     K  +          +L  KQ+D +    D T  R   +   F  
Sbjct: 48  VDLATALCKEM---QVKCTFTNQAFDSLIPSLIFKQVDAVISGMDITAERLKQVA--FTE 102

Query: 121 ITYFDGQGFIMHK----KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
             Y +    I  K    K+ ++ ++ L G  + +Q G+T +  L       + +   + +
Sbjct: 103 PYYENSALLIAEKSRAEKEKLTDLAALKGKRVGLQNGSTHQRFLQ----KKHPEIMALPY 158

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGD 234
              ++  +  ++ R DA  GD + +      ND  ++    I         L  A+ Q +
Sbjct: 159 SSYQDAVSDLKSGRLDAVFGDTAVINEWLRNNDNLTQIGEKITDADYFNQGLGIAVRQEN 218

Query: 235 T 235
           T
Sbjct: 219 T 219


>gi|254440571|ref|ZP_05054065.1| Bacterial extracellular solute-binding protein, family 3
           [Octadecabacter antarcticus 307]
 gi|198256017|gb|EDY80331.1| Bacterial extracellular solute-binding protein, family 3
           [Octadecabacter antarcticus 307]
          Length = 264

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 86/244 (35%), Gaps = 12/244 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           K F +    +I       +T  S L +I   G L+ G             A   + G+D+
Sbjct: 7   KFFKIIATAVIFASGAVQATAQSALNEILSEGVLRVGTTGDWNPMTMRDIATNTYVGYDI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L++ +  +   I+++P + K     + S Q   ++ +   +  R  + G +    
Sbjct: 67  DVMTMLANDLGVE---IEFVPTDWKTLVAGVTSGQYH-ITGSASVSPARAKAAGYSDSYF 122

Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           +       +       ++   L+  G S+    GTT E  +  YF A   +         
Sbjct: 123 SLVTVPLTLRENADRFTNWDDLNVEGVSVAATLGTTQEAQVKQYFPAATHRIVEAPARDF 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E+     + R DA          L    +     + +    S +P+A  + Q D  W N
Sbjct: 183 QEVL----SGRADASITSNIEAATLVEQYEN-LMIIPVDAGRSPTPVAMLLPQADQVWIN 237

Query: 240 IVSW 243
            V+ 
Sbjct: 238 YVNT 241


>gi|108563348|ref|YP_627664.1| amino acid ABC transporter, periplasmic binding protein
           [Helicobacter pylori HPAG1]
 gi|107837121|gb|ABF84990.1| amino acid ABC transporter, periplasmic binding protein
           [Helicobacter pylori HPAG1]
          Length = 256

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 74/251 (29%), Gaps = 15/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L+I FF  F   + +   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFL----LVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 57  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 112

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 113 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 167 AQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALE 226

Query: 240 IVSWTHYAMVT 250
           +++     ++ 
Sbjct: 227 LINQAMQRLIN 237


>gi|16263640|ref|NP_436433.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
 gi|14524351|gb|AAK65845.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
          Length = 296

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 17/230 (7%)

Query: 17  FTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
            T+ + +A    DI     +  G +K   +     F  V   G+  GF+VD   A++  +
Sbjct: 25  LTTGAVHAQTAADILPQIYRDAGVIKLVTDAKYPPFQSVNDAGEIVGFEVDLWNAIADRL 84

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFI 130
                K+    ++       +Q+ + DI          R+    ++F            +
Sbjct: 85  ---NVKVDVTSVSFDSLIPGVQAGRWDIAMEGITDNAERQKV--VSFVDYGYTTSSAYVL 139

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAA 185
             K   I     L G     Q+GT     +A         A   K     F   E    +
Sbjct: 140 EQKGSEIKDHLGLCGLKGSAQSGTEWVGMIAKEIGDACVAAGKDKPSVSEFGTSEATLLS 199

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             + R D      +    ++     P + + +  I+ + P   A  + +T
Sbjct: 200 LYSGRSDFVLTSAALAGEIQKVAPHPVKVIPMQ-ILPRMPSGIAFRKDET 248


>gi|238789649|ref|ZP_04633432.1| Arginine-binding periplasmic protein 1 [Yersinia frederiksenii ATCC
           33641]
 gi|238722202|gb|EEQ13859.1| Arginine-binding periplasmic protein 1 [Yersinia frederiksenii ATCC
           33641]
          Length = 243

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 80/216 (37%), Gaps = 18/216 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +    ++  +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEM---QAECTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   I+ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTQPYYENSALFIAEKG-KIADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L       + +   + ++  +      +  R DA  GD + +        + ++ 
Sbjct: 136 THQKFL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEW---LKQNNQL 188

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
           V + D ++ +         A+ Q +TE    +    
Sbjct: 189 VAVGDKVTDANYFGTGLGIAVRQNNTELQGKLDAAL 224


>gi|251782157|ref|YP_002996459.1| arginine-binding protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390786|dbj|BAH81245.1| arginine-binding protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 252

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 16/249 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAI 71
           +     +   +    IK+ G L   ++     F     V       G D+   +A++  +
Sbjct: 1   MAACGKAEKVNRQDSIKQAGKLVVAVSPDYAPFEFKALVNGKDTIVGADIQLAQAIADEL 60

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 ++  P++      +LQ+ + D+      +T  R       F    Y      +M
Sbjct: 61  GVK---LELSPMSFDNVLSSLQTGKADLAISGLSYTKERAKV--YDFSTPYYETENAILM 115

Query: 132 H--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
                K    V+ L G  +  Q G+  E  +       N     +    + E     +A 
Sbjct: 116 RAADAKAAKDVTSLEGQKVAAQKGSIEEGLVKSQLPKSN----LVALTAMGEAINELKAG 171

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           +  A   +          +                  A A+ +        V+       
Sbjct: 172 QVYAVDLEGPVAAGYLAQHKDLVLASFSLKTTDGDAKAVALPKNSGTLTKTVNKVI--AK 229

Query: 250 TAEELGITQ 258
            AE+     
Sbjct: 230 LAEDDQYKA 238


>gi|152973035|ref|YP_001338181.1| putative arginine-binding periplasmic protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|262045406|ref|ZP_06018429.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330003308|ref|ZP_08304579.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella sp. MS 92-3]
 gi|150957884|gb|ABR79914.1| putative arginine-binding periplasmic protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|259037235|gb|EEW38483.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328537019|gb|EGF63307.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Klebsiella sp. MS 92-3]
          Length = 243

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 74/219 (33%), Gaps = 11/219 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G  T    F          GFD+D   AL   +    ++ Q+          AL+ 
Sbjct: 22  TLHFGTTTANPPFVTANGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    +   +RE  +   F         G ++  K    + + L    + V  GT
Sbjct: 79  KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVIVNKDVAHTFADLKAKKVGVVKGT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212
             +  L D  KA       + ++ V    AA +A +     GD + L A +  N      
Sbjct: 137 LHQRYLRDKQKA----VQAVPYDDVASALAALKAGQITGVMGDFATLDAWQQENPDYAIM 192

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           +             A A+ + D E  N ++    A++  
Sbjct: 193 DERATDPAYYGKQYAIAVRKDDPELLNAINDALAAVMAT 231


>gi|117618389|ref|YP_858704.1| cystine-binding periplasmic protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559796|gb|ABK36744.1| cystine-binding periplasmic protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 252

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 21/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +     I+L   S    A           +K G++     F  VK +   +GF+
Sbjct: 1   MTSSIKLVSGAAILLAALSGQAIAQE--------TIKVGMSGKYFPFTFVKQD-KLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +          ++++  +    F  L++ ++D +S     T  R+     AF  
Sbjct: 52  VDMWNQIGERTGYK---VEFVTASFSGLFGMLETGRVDTISNQITITDERKA--KYAFSQ 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   ++ K    I  +  L G  + V  G+  E  L       N     I     
Sbjct: 107 PYVYDGAQIVVRKGNSTIHGIKDLEGKKVAVNLGSNFEELLR-----KNDPNKKIDIRTY 161

Query: 180 EEID-AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +          R DA+  D  +   L   +  P +    P    ++ L            
Sbjct: 162 DSAFEQDVALGRIDAFVMDRVSTAQLIKESKLPLQQAGAPFETIENALPFLKTPEKQALL 221

Query: 239 NIVSWTHYAM 248
             V     AM
Sbjct: 222 KKVDDALTAM 231


>gi|154148143|ref|YP_001406030.1| arginine-binding periplasmic protein 1 [Campylobacter hominis ATCC
           BAA-381]
 gi|153804152|gb|ABS51159.1| arginine-binding periplasmic protein 1 [Campylobacter hominis ATCC
           BAA-381]
          Length = 246

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 74/220 (33%), Gaps = 19/220 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  IL   +L FT  +              L  G N     F  +    +  GFD
Sbjct: 1   MKK--FFKILSCFMLIFTFANAKDFTKD------TLIVGTNATYPPFEFLDDKSEVTGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    LS  I      +    ++      AL+S +IDI +     T  R+    + F  
Sbjct: 53  FDLMAELSKRIGFKYEVLN---MSFDGLIPALKSGKIDIAAAAMSATPARKK--AVDFSN 107

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             YF    F+  K    I+ +  L+G  I VQ GT     + +              E +
Sbjct: 108 AYYFTENLFLKCKDSTDITKIDDLNGKKIGVQLGT-----VQEMAAKELNGVDVSASEDI 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                + +  + DA   D S  Y+    N    E   +PD
Sbjct: 163 FVAIMSLKNKKVDAVLVDSSIGYSYLKKNPDLVEFAKVPD 202


>gi|310779362|ref|YP_003967695.1| cyclohexadienyl dehydratase [Ilyobacter polytropus DSM 2926]
 gi|309748685|gb|ADO83347.1| cyclohexadienyl dehydratase [Ilyobacter polytropus DSM 2926]
          Length = 252

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 86/252 (34%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L+++ F++ S     +  I +   ++ G       F       D++G+D
Sbjct: 1   MKKILLI----LMVVVFSAISFAEGRVDSILRNKKIRVGTTGDYKPFTYYNGK-DYEGYD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + ++S I  +   ++++    K     L++ + DI       T      L      
Sbjct: 56  IEVAKYIASEIGVE---LEFVSTTWKNLITDLEADKFDIAMGG--ITRRTGRQLKAEISR 110

Query: 121 ITYFDGQGFIMHKKKG----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                G+  I+ K               G  + V  G T E       K+       I +
Sbjct: 111 PYLVFGKCPIVRKADEQKYKSLEDIDQPGVKVGVNIGGTNEKFADQNIKSAK----IIRY 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E+  ++  A      D    +            +     +  + ++KS L   I +GD E
Sbjct: 167 EKNLDVPVAVMKGEVDVMISETPE-AMHYANEYKELASPMTANPMTKSQLGYLIPKGDNE 225

Query: 237 WYNIVSWTHYAM 248
             N++++    M
Sbjct: 226 MLNLINFIMDEM 237


>gi|238561050|ref|ZP_00442711.2| polar amino acid uptake abc transporter, paat family, periplasmic
           amino acid-binding protein [Burkholderia mallei GB8
           horse 4]
 gi|254356367|ref|ZP_04972643.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei
           2002721280]
 gi|148025364|gb|EDK83518.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei
           2002721280]
 gi|238525443|gb|EEP88871.1| polar amino acid uptake abc transporter, paat family, periplasmic
           amino acid-binding protein [Burkholderia mallei GB8
           horse 4]
          Length = 318

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 15/223 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDV   + +++ +   P   Q++   
Sbjct: 82  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDV--AKEVAARLGVKP---QFVTTE 136

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 137 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 194

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 195 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 249

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 250 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 291


>gi|17987305|ref|NP_539939.1| arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis bv. 1 str. 16M]
 gi|256044619|ref|ZP_05447523.1| arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256113497|ref|ZP_05454331.1| arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis bv. 3 str. Ether]
 gi|256264046|ref|ZP_05466578.1| extracellular solute-binding protein [Brucella melitensis bv. 2
           str. 63/9]
 gi|260563971|ref|ZP_05834457.1| arginine/ornithine-binding periplasmic protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|265991045|ref|ZP_06103602.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265994880|ref|ZP_06107437.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|17982985|gb|AAL52203.1| arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis bv. 1 str. 16M]
 gi|260153987|gb|EEW89079.1| arginine/ornithine-binding periplasmic protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|262765993|gb|EEZ11782.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|263001829|gb|EEZ14404.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263094232|gb|EEZ18109.1| extracellular solute-binding protein [Brucella melitensis bv. 2
           str. 63/9]
 gi|326408976|gb|ADZ66041.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis M28]
          Length = 148

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 7/151 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVSALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
             Y    G    K   I   +   L+G +I 
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 146


>gi|293366163|ref|ZP_06612849.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319685|gb|EFE60045.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 472

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 15/238 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSS 69
           + +  ++++        IK RG L+ G++           +    ++ G D++  + ++ 
Sbjct: 7   LFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEYAGVDIELAKKIAK 66

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
               +  K++ + +       AL++ +IDI+      T  R+    + F           
Sbjct: 67  D---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EVDFTKPYMITNNVM 121

Query: 130 IMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           ++ K       ++    G  I  Q GT  E       +            R+ E   + +
Sbjct: 122 MIKKDDAKRYQNIKDFEGKKIAAQKGTDQEKIAQTEIE----DSKISSLNRLPEAILSLK 177

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + +      +     A    N        +     K     A+ +      + ++ T 
Sbjct: 178 SGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNSPVLLDKLNQTI 234


>gi|258622432|ref|ZP_05717454.1| Cystine-binding periplasmic protein [Vibrio mimicus VM573]
 gi|258585132|gb|EEW09859.1| Cystine-binding periplasmic protein [Vibrio mimicus VM573]
          Length = 278

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 20/242 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++       ++
Sbjct: 29  AVASDTPNLDTIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW---QV 84

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136
           +++P        AL +K+ D++      T  R  S  + F       G      KK  +G
Sbjct: 85  EFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASKKLAEG 142

Query: 137 ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            S +   +     I  + G  T     + F         + F+   +           A 
Sbjct: 143 FSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVINGNAHAV 198

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAMV 249
                      + +      +   + +SK   A A+  G+ +        I   T    +
Sbjct: 199 IASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGWL 257

Query: 250 TA 251
            A
Sbjct: 258 QA 259


>gi|91786311|ref|YP_547263.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91695536|gb|ABE42365.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 254

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 13/220 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L +++K G +          F   +      GF+V+    ++  +      +++  L  
Sbjct: 24  SLDEVRKEGKIIIATEGQFAPFNYFQGA-KLSGFEVELAELVAKKMG---VSVEWKALGF 79

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                 L+  + D++  +   T  R     + F    Y  G   +      I + + L+G
Sbjct: 80  DALLAGLRQDRWDLVIASHGITEERSR--AVTFADPHYCSGGSIVSL-DPAIRTTADLNG 136

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             I VQ G+T    +               F +  +  +A  + R DA+  D     A  
Sbjct: 137 KVISVQTGSTYMDNVRKLAGVK----DVKNFPQDTDARSALVSRRVDAWVTDK--FVASI 190

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                P   + L D +    +A A+ +G+       +   
Sbjct: 191 AIAANPGAGMKLGDFVFIERIAAAVGKGNASLAQGYNKAL 230


>gi|296273473|ref|YP_003656104.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097647|gb|ADG93597.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 249

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 102/242 (42%), Gaps = 14/242 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+     SI+ LI+L   S+S +     +I   G+++ G++   + F  +  +G   GFD
Sbjct: 1   MHTTIMKSIIILILLVQYSYSKS---FKEILNDGYIRVGVSYDYIPFGFINNDGILDGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + + + +     +++++ +++  +   L   ++DIL         ++ +  + F  
Sbjct: 58  IDLIKRMMNKL---ELRVKFIEVSSTNKEKMLLDDKLDILFAGMS--KDKQSNKNIIFTK 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y D Q  +++  K + ++  +    +    GT         F         + F +  
Sbjct: 113 PYYTDEQVILLNSNKNVKTLKDMDNMHVGSLKGTNYLTN----FLKIQPNVLTVSFSQYP 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A   +  DA T   S  +A +     P+E  IL D+I +   + A+ + + +    
Sbjct: 169 QLTKALAYNNIDAVTAGSS--WAKEQVESHPNEFRILSDVICQINYSMALKKSNEDLKEK 226

Query: 241 VS 242
           ++
Sbjct: 227 LN 228


>gi|224283186|ref|ZP_03646508.1| solute binding protein of ABC transporter system [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 309

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51
           M +  F + L  ++    S +   S        G          +  G+ +   G     
Sbjct: 15  MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLGVW- 71

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG + GFDVD  R ++ A+     +I + P+  + R   L+S Q+D++  +   T   E
Sbjct: 72  HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 131

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               +          Q  ++       I+ +  ++G   CV AG+     + D  ++   
Sbjct: 132 S--AVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAP 185

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K      +   +   +      DA     + L  L           ++     +     A
Sbjct: 186 KASIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGNGYV-QVVGAPFGEERYGIA 244

Query: 230 IIQGDTEWYNIVSWTHYAMV 249
           +  G+T+  + +      M+
Sbjct: 245 VKHGNTQLADSIGDILSDMI 264


>gi|222147484|ref|YP_002548441.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221734474|gb|ACM35437.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 256

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 85/266 (31%), Gaps = 17/266 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F  +++  ++L  +        L  IK+ G ++ G       F+    +G+  G D+   
Sbjct: 4   FRTALVTALLLTSSLAHAEDGTLATIKQAGVIRIGTTGDYKPFSYKGGDGELVGADISMG 63

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +AL++ +   P    ++  + K      ++ + D++         R       F      
Sbjct: 64  KALATDLGVKPE---FVMTSWKTMLEDFKAGKFDMVLGGITVNPARAEV--GDFSLSNVK 118

Query: 125 DGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           DG+  I+  +                 + V  G T +    ++F          VF   +
Sbjct: 119 DGKRPIVRCEDKDRLVTLEAIDQPSVRVIVNPGGTNDKFAHEHFTKA----PIEVFPDNK 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I     A++ D    D   +      +        + +  +    A  + + D  +   
Sbjct: 175 VIFDQIAANKADVMVTDGVEVDLQSKLHPGVLCPSAVKEPFTHFENAYLLRK-DPAFKAA 233

Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266
           V      M  A E G  +  ++   +
Sbjct: 234 VDG---FMAKALENGDWKAKLDAAMQ 256


>gi|257488015|ref|ZP_05642056.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330891101|gb|EGH23762.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|331008689|gb|EGH88745.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 266

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 84/242 (34%), Gaps = 11/242 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66
            +  L  L  +S +   + L  I++R  L  G+      F  +       KG +V+    
Sbjct: 1   MLGVLASLTVSSAALADATLDRIQERHRLVVGVLLSGGPFGSIDPQTRKPKGVNVELAED 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +  D   ++ + +    R   LQ  ++D+L  N +WT  R   LG    P     G
Sbjct: 61  IGKRLGVD---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLGSVPTPFYRVGG 117

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              ++ K   I+    L G  +C   G++    L +             F+   E   A 
Sbjct: 118 TAAVL-KDSKITRWEDLKGQPVCTSQGSSYIKALTE------FGADIKAFKSSSESLLAL 170

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           R + C A   D + +  L   ND    +  +   ++ +P       G+ +    +     
Sbjct: 171 RGNNCVAAVHDATLVNPLLAGNDEWKGYRAITPELNPAPSVIWTRSGEADTQKRLDSIVQ 230

Query: 247 AM 248
             
Sbjct: 231 EW 232


>gi|330813245|ref|YP_004357484.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486340|gb|AEA80745.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 257

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 86/243 (35%), Gaps = 13/243 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K     ++ ++       +   S L  I K G L+ G        +        ++GF
Sbjct: 3   MKKIILTLLITVMAFS----ANAESRLNKILKSGELRVGTTGDWDPMSLKDPATNKYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+P + K     + S + DI   +T  T   + +L   F 
Sbjct: 59  DIDVSTELAKDMGVK---VKYVPTDWKTIVSGITSDRYDI---STSATKTAKRALVAGFT 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G   ++ KK      +  S  +  V   TT   +  +  K   +K      E  
Sbjct: 113 NSYYKYGTVALVLKKNIKKFPTWESLNNKNVTIATTLGTSQEEMAKKIFVKSKLKSIEAP 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                   + R D +    S+  A KL    P   ++     + + LA  I Q D  W N
Sbjct: 173 ARDFQEVLSGRADGHIT--SSTEANKLVITYPQLAIVPDGGKNPAVLAILIDQSDQVWLN 230

Query: 240 IVS 242
            V+
Sbjct: 231 YVN 233


>gi|326693349|ref|ZP_08230354.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 481

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 19/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K + + +  L++ F  +   +A        +       +     F     N  + G +
Sbjct: 3   MLKRYVLGLATLVMFFLLTPIASAD-------KPHYTITTDATYAPFTFQDKNNRYVGIE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  +A++     +       P++       + + Q D +      T  R       F  
Sbjct: 56  QDMMKAIAER---ERFTYTMKPMSFNSAAQLVSNGQADGIIAGMSITPER--RQVYDFST 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G  +I+ K   I S++ L G ++ ++ GT          K +        F   +
Sbjct: 111 PYYKTGVAWIVKKGSKIKSLADLKGQTVALKTGTAASEYGLSLQKKYGF--QVKYFNDTD 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWY 238
            +          A   D+  +   +          ++      +      A+ +G  +  
Sbjct: 169 TMYNDVAVGNSAATFEDMPVI---QYAIKNGMALKVMNPDQPGNAGSYGFAVEKGKNKAL 225

Query: 239 NIVSWTHYAMV 249
                  +A +
Sbjct: 226 LAAFNRGFAAI 236


>gi|296138522|ref|YP_003645765.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296026656|gb|ADG77426.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 483

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 15/223 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    ++  ++++     +  A  L D    G L+ G       ++   +     G+DV+
Sbjct: 5   RRLLAALFAVLVVAGPLPANAAPPLPD---PGVLRVGTEGVYQVYSYHDSADRLTGYDVE 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++  I     +++++         AL++ + D+++     T   E +         
Sbjct: 62  MITAIAQKIGW---RVEFVETPWDSMMAALEANRFDLVANQ--VTFSAERAAKYELSDPY 116

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              G   ++ K    I S+  L G +   Q+ T++   +A+   A              +
Sbjct: 117 LQTGGSVLVRKDDNSIDSLDDLRGRT-AAQSITSSWSGVAEKAGAK-----VEAVNSFTD 170

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                 A R DA   D   +      N R    +         
Sbjct: 171 AVNVLAAGRVDAVVNDTGVVRNYLAVNPRAPVKIAAQTPDRSQ 213


>gi|150389059|ref|YP_001319108.1| extracellular solute-binding protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948921|gb|ABR47449.1| extracellular solute-binding protein, family 3 [Alkaliphilus
           metalliredigens QYMF]
          Length = 269

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 25/264 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----------FLKCGINTGLVGFAEV 50
           M K     +  L+ L     +   S   +++              +K G + G   +  +
Sbjct: 1   MKKRIV--LFALLSLIVGVLAACQST--EVESTDNDPSPEVSLDTIKVGTSGGYHPYTFM 56

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +    GF++D    +         +IQ+        F  L S +I+ ++     T  R
Sbjct: 57  NDDDTLDGFEIDTWNEIGERA---NLEIQFETSAFSGLFGMLDSNRINTIANQITMTAER 113

Query: 111 EISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           E      F     F G   ++      I+S+  L G  + V  G+  E  L ++   +  
Sbjct: 114 EE--KYLFTEPYVFSGAQILVKGDNDSITSLEDLKGKRVGVSLGSNYEQLLREFDTEN-- 169

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           +   + +E            R DA   D   L ++        +  +  D +     A  
Sbjct: 170 EIDIVTYEDFSGSVQEVALGRLDAMINDR--LASMINIESSGLDLKLGGDPVHPLQNAFP 227

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEE 253
            +  + E   +V   + A+V+  E
Sbjct: 228 FVDNE-ENAVLVERINNAIVSMHE 250


>gi|323127010|gb|ADX24307.1| arginine-binding protein [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 252

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 70/249 (28%), Gaps = 16/249 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAI 71
           +     +   +    IK+ G L   ++     F     V       G D+   +A++  +
Sbjct: 1   MAACGKAEKVNRQDSIKQAGKLVVAVSPDYAPFEFKALVNGKDTIVGADIQLAQAIADEL 60

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 ++  P++      +LQ+ + D+      +T  R       F    Y      +M
Sbjct: 61  GVK---LELSPMSFDNVLSSLQTGKADLAISGLSYTKERAKV--YDFSTPYYETENAILM 115

Query: 132 H--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
                K    V+ L G  +  Q G+  E  +       N     +    + E     +A 
Sbjct: 116 RAADAKAAKDVTSLEGQKVAAQKGSIEEGLVKSQLPKSN----LVALTAMGEAINELKAG 171

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           +  A   +          +   +              A A+ +        V+       
Sbjct: 172 QVYAVDLEGPVAAGYLAQHKDLALASFSLKTTDGDAKAVALPKNSGTLTKTVNKVI--AK 229

Query: 250 TAEELGITQ 258
            AE+     
Sbjct: 230 LAEDDQYKA 238


>gi|229528070|ref|ZP_04417461.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
 gi|229334432|gb|EEN99917.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
          Length = 278

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 83/243 (34%), Gaps = 20/243 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     GD  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGDLIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G      K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137

Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           K  +G   +   +     I  + G  T     + F         + F+   +        
Sbjct: 138 KLAEGFFKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              A            + +      +   + +SK   A A+  G+ +         +   
Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEED-----KKAFFDQW 247

Query: 250 TAE 252
            AE
Sbjct: 248 IAE 250


>gi|150403716|ref|YP_001331010.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150034746|gb|ABR66859.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 253

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+    + I  + ++ F+      +    I++ G L  GI+  L   + +    +  GF+
Sbjct: 1   MFNPKILIISTIFLIIFSGCIAENTNKTTIQE-GILTIGISPDLPPISYLDNK-NPAGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +  +P    +          A+++ +ID        T  RE    + F  
Sbjct: 59  IDLITEIAKRMSLEPE---FKIYEFSSLLDAVENSEIDCAVALIAITPERE--NKVDFSR 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      ++ +    + +  L    + V  G+  E  +  +    +M++  + +E  E
Sbjct: 114 CYFKTYTTILVKENDFCNGLKCLENKKVGVLKGSVQESLMEGFLD--DMEFELVHYENQE 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +     +   D+   +     A  L NDR     I+ D +  +  A A+   + +    
Sbjct: 172 YMHKDLLSGSIDSEVCEFLT--AKNLINDRNYSLKIVGDQMDINYDAIAVNSENDDLKRA 229

Query: 241 VSWTH 245
           ++   
Sbjct: 230 INTAI 234


>gi|226314123|ref|YP_002774019.1| amino acid ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
 gi|226097073|dbj|BAH45515.1| amino acid ABC transporter substrate binding protein [Brevibacillus
           brevis NBRC 100599]
          Length = 270

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 24/261 (9%)

Query: 1   MYKD-----FFVSILCLIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAE 49
           M K        +S + +  L  ++  +  S      +      +      ++     F+ 
Sbjct: 1   MKKRAKWSGILLSTVLVGSLLLSACGSQGSAPAAGGQAAGDGGKKDFTYAMSGVYKPFSF 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              NG   GFDV+  +AL+  +  +   I       +     L +K+ D +  +   T  
Sbjct: 61  K-ENGQLTGFDVEIGQALAEKMGMNAVPIT---NPFETIIPGLDAKKYDAVIGSLTVTPE 116

Query: 110 REISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R+    + F    Y  G   F+      I +   L G  I V   +       D+ K   
Sbjct: 117 RQK--AVLFTNPYYRSGSQIFVQEGNTTIKTKEDLKGKKIGVVKAS----NYLDWAKKLT 170

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
            +     ++            R DA   D   +  L+   +   + + + + +S    A 
Sbjct: 171 DEDKITQYDSDITALLDLPTGRLDAVITD--QVVGLRFIKEGGGKVIDVGEPLSFDEQAI 228

Query: 229 AIIQGDTEWYNIVSWTHYAMV 249
           A+  GD E    ++     +V
Sbjct: 229 AVRLGDQEAVERINKALDEIV 249


>gi|169334792|ref|ZP_02861985.1| hypothetical protein ANASTE_01198 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257530|gb|EDS71496.1| hypothetical protein ANASTE_01198 [Anaerofustis stercorihominis DSM
           17244]
          Length = 257

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 63/237 (26%), Gaps = 11/237 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L +      +   S               +T    F       ++ G D
Sbjct: 1   MKKGKRILACILAVGLIVGLAGCGSKSDSKGGDKSYIIATDTTFAPFEFTDDKNNFTGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++     D        L       AL+S Q D +      T  R       F  
Sbjct: 61  VDILSAIAKDQGFDYE---LQSLGFDAAVAALESGQADGVIAGMSITDERAK--KYDFSD 115

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +      I S   L+G  +  + GT            +        F+  
Sbjct: 116 AYYDSGVVMAIKADDSSIKSYEDLNGKKVACKTGTEGATFAESIKDKYGF--EIAYFKDS 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            ++    +     A   D   +          +   ++ D+   S    A+++G   
Sbjct: 174 PKMYEDVKTGNTVACFEDYPVMGYGISQ---GNGLKMVTDMEKGSSYGFAVLKGKNA 227


>gi|170758579|ref|YP_001786790.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405568|gb|ACA53979.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 272

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 16/202 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51
           M K       VS L +I L     +  A+   +      K    +  G +     +   +
Sbjct: 1   MKKKKLSLILVSALAVITLLAGCGNEKATSTEEQNTGNSKSEKKIIVGTSPDYYPWCYTE 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           A G  +GF++D    +      D   I++        F  L + QID ++     T  R 
Sbjct: 61  A-GKLQGFEIDVWNEIGKKAGYD---IEFKQSKFSGLFGMLDAGQIDTVAHQISTTEERR 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F     + G  F+++K K I S+  L G  +    G   E TL    +   +  
Sbjct: 117 K--KYDFTETYAYSGYSFVVNKDKDIKSLEDLKGKKVGCTLGGNGEKTLKKLNEEKGLNI 174

Query: 172 HPIVFERVEEIDAAYRAHRCDA 193
             + +++   ++      R DA
Sbjct: 175 KVLTYDQTP-MEKDVEIGRLDA 195


>gi|312863094|ref|ZP_07723332.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus vestibularis F0396]
 gi|311100630|gb|EFQ58835.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus vestibularis F0396]
          Length = 732

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 11/219 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +      +++    F     +G + G DVD   A++    +    ++           A
Sbjct: 274 AKETYTISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNA 330

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS Q D +      T  R+      F    Y       + K   I S   L G ++  +
Sbjct: 331 VQSSQADAVLAGMTITDARK--QIFDFSDSYYTSNIRLAVAKGSKIKSYKDLKGKTVGAK 388

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT++   L D+   +        ++    +  +  +   DA   D      L     + 
Sbjct: 389 NGTSSYSWLEDHAGEYGF--TVRAYDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQG 443

Query: 212 SEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMV 249
                  + I+   +  A+ +G + E   + +    A+V
Sbjct: 444 RNFTTPIEGIATGDVGFAVKKGANPELIEMFNNGLAAIV 482



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  + +FF   +  ++          +    +T    F    ++  +KG D
Sbjct: 1   MKKKLLTLFLSAMSVFFVFGAKVSAE--------TISVVSDTAYAPFEFKDSDQIYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRKNWD---VNQTFPGFDAAVNAVQSGQADSLMAGTTVTDARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +S   QL G ++ V+ GT  +  L      +        F+  +
Sbjct: 108 TYYDTSIVIYTRSSDKVSDYKQLKGKTVGVKNGTAAQTWLDKNASKYGF--TVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  +   DA   D   +         
Sbjct: 166 LMNNSLDSGSVDAAMDDTPVVKYAIGQGKD 195


>gi|158424034|ref|YP_001525326.1| putative soluble lytic transglycosylase [Azorhizobium caulinodans
           ORS 571]
 gi|158330923|dbj|BAF88408.1| putative soluble lytic transglycosylase [Azorhizobium caulinodans
           ORS 571]
          Length = 262

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 71/247 (28%), Gaps = 11/247 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
           K     +L       T      S L  ++K G LK         F  +    G ++G D+
Sbjct: 7   KALGTGLLLAAFALGTPARAQESHLEQVQKIGALKVCTTGDYRPFTYLDPATGKFEGIDI 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L +A+      ++++  +             DI       TL R+ +   +   +
Sbjct: 67  DLANDLGTALGVK---VEFVKTSWSNLMKDFTGGACDIAMGGISITLPRQKAAYFSIPIM 123

Query: 122 TYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            +++ +   G +  V  G T E       K        +VF   
Sbjct: 124 VDGKTPITKCENVSKFQTLADIDKPGVTAVVNPGGTNESFARASLK----NAKIVVFPDN 179

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I     A R D    D       +  +      V      + S  A  + QGD  +  
Sbjct: 180 TTIFEEILAGRADLMMTDAIETRLQEKRHP-GLCAVHPDKPFTFSEKAFLLPQGDEVFKA 238

Query: 240 IVSWTHY 246
            V    +
Sbjct: 239 FVDQWLH 245


>gi|331005148|ref|ZP_08328548.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
 gi|330421028|gb|EGG95294.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
          Length = 265

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 11/238 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+      +++   + S +  I   G +K   + G V F      GD+ GFD
Sbjct: 1   MIKRIISTIVISSAASWSTLGYSESTISSIISSGEIKSCFDAGYVPFEMKSKKGDYIGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +      +            +L +K+ DI++     T  R  ++ + F  
Sbjct: 61  IDIMKLMAKKMGVKFVPVN---TAWDGIIASLITKKCDIIAAGMTITAER--NVKINFAN 115

Query: 121 ITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                GQ  +     K  I S   L+     +     T  T+A   K    K     FE 
Sbjct: 116 PYITVGQTVLLNPKIKDEIKSYKDLNDPKYTLTTKIGTSATVAMQNKLSKAKSRL--FES 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +E          DA   D+         N     H  L    +  PL  A+  GD +
Sbjct: 174 QDEAALEVINGNADALVFDLPYNALFAAQNKGKVVH--LDQPFTYEPLGWAVRAGDPD 229


>gi|227496260|ref|ZP_03926556.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Actinomyces urogenitalis DSM 15434]
 gi|226834185|gb|EEH66568.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Actinomyces urogenitalis DSM 15434]
          Length = 314

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 67/227 (29%), Gaps = 17/227 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I   G L  G++        +  +    G+D+D  RAL++ +  + +           
Sbjct: 65  ESISSDGKLTIGVSADYPPAEFLDTSNQPVGYDIDLSRALAAVLGLEATA---QHAEFDS 121

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVSQL 143
              ++ S + D+   +   T  RE S  +         G  F + K       +S    L
Sbjct: 122 IIPSIGS-KYDLGISSFTITPEREASTEM---VSYISVGSQFNVAKGNPTGLDLSDTLGL 177

Query: 144 SGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            G ++ VQ GT  E  +     D   A         +    +   A      DA   D +
Sbjct: 178 CGKTVGVQTGTAQEEDIQGFNEDCQAAGKDAIDIKSYALNSDATTALAGGTLDAVFSDST 237

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              A                +   +P    I +GD      +     
Sbjct: 238 --VAGYAQIQTGGAVETAGKVFDAAPQGIVIAKGDEATAKAIQAAVQ 282


>gi|45358113|ref|NP_987670.1| amino acid ABC transporter periplasmic protein [Methanococcus
           maripaludis S2]
 gi|44920870|emb|CAF30106.1| similar to ABC-type amino acid transport system, periplasmic
           component [Methanococcus maripaludis S2]
          Length = 264

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 23/256 (8%)

Query: 1   MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M     + I+ LI              + ST  +   ++++ G LK G+      F    
Sbjct: 1   MNNKVLILIIGLIGAVLAFSGCVSNSEAQSTEDNSWKNVEESGVLKVGLCAAWPPFESRN 60

Query: 52  AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+ +GFDVD   AL   +  +   ++ +    +     L     D L          
Sbjct: 61  EKTGEIEGFDVDLANALGEELGIE---VEIVDAEWQALLGGLSKGDYDTLITCMS--KKE 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
                +    + Y      ++      I++VS LSG  + VQ G+ +E  +     A + 
Sbjct: 116 ASVENVEMSEVYYELNDVIVVRNDNNEINNVSDLSGKIVGVQLGSGSEQAV----DALSG 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 +    E     + +R DA     + + +         +  +L   I+ + +   
Sbjct: 172 IKEIKRYNYNPEAMIDLQNNRSDAVVVGYTYVLSEISKYP---DLKVLDTPIASAEIVMV 228

Query: 230 IIQGDTEWYNIVSWTH 245
             +G  E    ++   
Sbjct: 229 QKEGAKELTVKLNEAL 244


>gi|229552146|ref|ZP_04440871.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258539560|ref|YP_003174059.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|229314448|gb|EEN80421.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257151236|emb|CAR90208.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 485

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 83/255 (32%), Gaps = 24/255 (9%)

Query: 3   KDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           K + ++++ +     T           L  I+++G +  G +     +            
Sbjct: 5   KRWLIALVAVFAAIVTLNMQTVQADDSLAKIQQKGTIVMGTSPDYAPYEFLVNKNGKNQV 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DV+  R ++  +      +    +N     +ALQS ++D++      T  R     +
Sbjct: 65  VGMDVEVARKIAKDLGVK---LVIKQMNFSSLLVALQSGKVDMVLAAMSPTNARRK--SI 119

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y  GQ  +++K            +   + VQ G+  E       K+       +
Sbjct: 120 DFSKTYYKSGQDILINKTDAKIYKDHKSFANKKVGVQNGSLQETLAKTQMKS----STTL 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISKSPLAPAI 230
              +V ++  A + H+      + +   A    +D+    P    +  D +     A   
Sbjct: 176 GLTKVTDLILALKTHKVAGVVAEGAVAQAYTSNDDKLVEIPGHFNLSSDTMGT---AIGF 232

Query: 231 IQGDTEWYNIVSWTH 245
            +G        + + 
Sbjct: 233 AKGSDSLVAAANKSL 247


>gi|238022358|ref|ZP_04602784.1| hypothetical protein GCWU000324_02265 [Kingella oralis ATCC 51147]
 gi|237866972|gb|EEP68014.1| hypothetical protein GCWU000324_02265 [Kingella oralis ATCC 51147]
          Length = 279

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 79/262 (30%), Gaps = 26/262 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKK-----------------RG-FLKCGINTGL 44
           K +  +    + L   +    ++   +                     G  L+   N   
Sbjct: 4   KTWLSAAFSCLTLSLAACGGQSNAPANHSASHPAPAAASGASGTADGNGRVLRVAGNATF 63

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  +  N    GFD+D   A+  A      K++Y     +  F AL +   D+L    
Sbjct: 64  APFESLDENKKVTGFDIDLINAMGEA---GNFKVEYKDQPWESLFPALSNGDADVLVSGI 120

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADY 163
             T  R+ ++   F    Y   Q  ++   K ++ V  L     I V  G T +      
Sbjct: 121 TITDERKATMA--FSEPYYQITQVVLVPPSKNVAKVEDLKKLHKIGVVTGYTGDYAAQKI 178

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           F         + F+ V  +         DA   D + +      N      ++       
Sbjct: 179 FGP--TSEQVVRFDNVGLLTKEVENGGVDAGILDNAVVAHYIKNNSSKGFKMVALPDFPA 236

Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245
                A+ + D +   +++ + 
Sbjct: 237 EHYGMAVRKDDAQTLALLNDSL 258


>gi|153216005|ref|ZP_01950227.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
 gi|124114518|gb|EAY33338.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
          Length = 278

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 20/242 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++       ++
Sbjct: 29  AVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW---QV 84

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136
           +++P        AL +K+ D++      T  R  S  + F       G     +KK  +G
Sbjct: 85  EFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANKKLAEG 142

Query: 137 ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            S +   +     I  + G  T     + F         + F+   +           A 
Sbjct: 143 FSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVINGNAHAV 198

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAMV 249
                      + +      +   + +SK   A A+  G+ +        I   T    +
Sbjct: 199 IASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGWL 257

Query: 250 TA 251
            A
Sbjct: 258 QA 259


>gi|118473444|ref|YP_889564.1| glutamine ABC transporter permease/substrate-binding protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118174731|gb|ABK75627.1| glutamine ABC transporter, permease/substrate-binding protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 468

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 84/288 (29%), Gaps = 32/288 (11%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            +++  L+ L        AS  G+           +     F    A+G + G D+D   
Sbjct: 1   MLAVAALVGLIPMVAPATASAEGE-----TYVVATDITFAPFEFQDASGKFVGIDIDLIN 55

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +++        +   PL       A+Q+ Q D +      T  R+      F    +  
Sbjct: 56  EIAAD---QNFTVTIKPLGFDAALQAVQANQADGVIAGMSITDERKKV--FDFSDPYFES 110

Query: 126 GQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           G    ++     I S   L G  + V+ GT            +      + F     +  
Sbjct: 111 GVQMAVLASDDDIKSYEDLRGKRVAVKNGTEGAEFAESIKDKYGF--TTVYFADSASMFD 168

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R     A   D      L+    + +    +      +    A+ +G           
Sbjct: 169 EVRTGNSQAVFEDYPV---LQYGIAQGNGFKTVTPKEKGANYGFAVNKGQ---------- 215

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPD-VQRFLGIDKSSNIGEALGL 291
                 AE L      + Q+ +     + +  +LG +   N    LGL
Sbjct: 216 -----NAELLQKFNAGLAQLKESGRYDEIISTYLGEEAVDNDNSFLGL 258


>gi|329927997|ref|ZP_08282001.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328938101|gb|EGG34498.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 482

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 100/296 (33%), Gaps = 18/296 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   + F+V +  L+++         S  G+       + G +     F    A+G + G
Sbjct: 1   MKSLRVFYVFMSLLLLMAVGVPYWTVSAAGEPASGKTYQIGTDVTFAPFEFQDASGKFVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D   A++        K +  PL       AL++ Q+D +      T  R+      F
Sbjct: 61  IDMDLLDAIAKD---QNFKYEIKPLGFNAAVQALEANQVDGVIAGMSITDERK--QKFDF 115

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +  G    + + +  I S   L G  + V+ GT            +      + F+
Sbjct: 116 SDPYFDSGVVMAIRQDQESIKSYEDLKGKKVAVKTGTEGYSFAESISSKYGF--TIVPFD 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236
              ++    +     A   D   L       ++ +   I+ ++   +    A+ +G  + 
Sbjct: 174 DSAQMYDDVKTGNSVACFDDFPVLA---YGVEQNNGLKIVTEMEPGASYGFAVSKGRNQE 230

Query: 237 -WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF-LGIDKSSNIGEALG 290
                 +       + E   I +K I + +         R+ L ++   ++ + LG
Sbjct: 231 LLEKFNAGLVNLKASGEYDRIKEKYIGENAVSAAKQS--RWGLIVESLPSLLKGLG 284


>gi|313140336|ref|ZP_07802529.1| solute binding protein of ABC transporter system [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313132846|gb|EFR50463.1| solute binding protein of ABC transporter system [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 295

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51
           M +  F + L  ++    S +   S        G          +  G+ +   G     
Sbjct: 1   MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLGVW- 57

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG + GFDVD  R ++ A+     +I + P+  + R   L+S Q+D++  +   T   E
Sbjct: 58  HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               +          Q  ++       I+ +  ++G   CV AG+     + D  ++   
Sbjct: 118 S--AVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAP 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K      +   +   +      DA     + L  L           ++     +     A
Sbjct: 172 KASIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGNGYV-QVVGAPFGEERYGIA 230

Query: 230 IIQGDTEWYNIVSWTHYAMV 249
           +  G+T+  + +      M+
Sbjct: 231 VKHGNTQLADSIGDILSDMI 250


>gi|207725137|ref|YP_002255534.1| cyclohexadienyl dehydratase precursor protein [Ralstonia
           solanacearum MolK2]
 gi|206590369|emb|CAQ37330.1| cyclohexadienyl dehydratase precursor protein [Ralstonia
           solanacearum MolK2]
          Length = 267

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 75/262 (28%), Gaps = 18/262 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57
           M+  F    ++L    +   + +   + L +I  RG L+ G       F+     +G + 
Sbjct: 1   MFVRFIRSTALLLCACVAAPALAQTTNRLDEILARGTLRVGSTGDYKPFSYKTTGDGRFI 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+    L+ A+      +                 + DI       TL R+      
Sbjct: 61  GLDVEMGERLAKALGVKLEVVP---TTWSTLMRDFGEDRFDIAMSGISVTLERQK--KAF 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +      DG+  I   +      +       G    V  G T E    ++ K        
Sbjct: 116 YSIPYQRDGKTPIARCENKDKFQTLEQIDQPGVRTVVNPGGTNEKFAREHLKQA----QI 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            V+     I     A R D    D      L+         V        S  A  + + 
Sbjct: 172 RVYPDNVTIFNEIVAGRADLMMTDAVETR-LQQKLHPELCAVHPDAPFDFSEKAYLLPR- 229

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  + N V       + + E  
Sbjct: 230 DVVFKNFVDQWLRQTMESGEFA 251


>gi|116254809|ref|YP_770645.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259457|emb|CAK10595.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 267

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 80/265 (30%), Gaps = 18/265 (6%)

Query: 1   MYKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +    +IL   L+      F   + +    + R  ++  +      F  + AN   +G
Sbjct: 1   MLRISIQTILRGALMAGGIGIFLAASPLEVAAQDRTPMRIAVEGAFPPFNYLDANNKLQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   AL         + Q++     +    L + + D +  +   +L R     +AF
Sbjct: 61  FDIDIANALCE---VGKFECQFIIEKWDDIIPNLVADKYDAIISSMSMSLER--RQKVAF 115

Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               Y     FI+ K   I+  S   LS   + V + T  E      +          +F
Sbjct: 116 TEKYYNSPSVFIVRKDSSINDISPVALSDKKLGVTSSTAQESFANHLYPE----MEKTIF 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAII 231
               E+         D    D  A+Y         S         +           A+ 
Sbjct: 172 RSSPELYKGLADGSVDIILEDKLAIYDWIANTKAGSCCEFKGPDLVDVTYFGEGAGIALR 231

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGI 256
             D E    ++    ++       +
Sbjct: 232 LDDKERLTRLNEALKSIKADGTYDM 256


>gi|121606948|ref|YP_984277.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120595917|gb|ABM39356.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 264

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 80/261 (30%), Gaps = 25/261 (9%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  +     L  I  R  +  GI T    +  +  +   +G DV   + ++  +      
Sbjct: 21  SVPAQADDSLTAIMARKSISLGIATDFPPYGFMSPDFKPQGLDVAVAQLIADKLGVKAE- 79

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
               P++   R   LQ+K+ID++  +      R     + F        Q     K   I
Sbjct: 80  --MTPVSTPNRIPYLQTKKIDLIVSSLGKNPERAKV--IDFSVAYAPFYQAVFGPKALSI 135

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S   L+G SI V  GT  +  L               FE      AA+ + +       
Sbjct: 136 KSFQDLAGKSIAVTRGTIQDDVLQQVAP---PTLKIQRFEDDNSTVAAFVSQQTQLLATG 192

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            +           P        ++  SP    + +G+T   + V+               
Sbjct: 193 AAVAGVAIQ--KNPQIQAEYKLLLKDSPNFIGVRKGETALLDKVNEILR----------- 239

Query: 258 QKNINQVSKDTTNPDVQRFLG 278
                  +  T N   QR+LG
Sbjct: 240 ----QAKADGTLNTYAQRWLG 256


>gi|312869117|ref|ZP_07729291.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095363|gb|EFQ53633.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 502

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 89/252 (35%), Gaps = 17/252 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             +  IK++G L  G +     +          ++ GF++D  +  +  +      +   
Sbjct: 47  DSVQRIKQKGTLVVGTSADYPPYEFTTKKNGKTEYVGFEMDVAKQFAKDLGVK---LVIK 103

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISS 139
            ++     +AL+S ++D +    + T  R+    + F    Y   + F+++K  +    S
Sbjct: 104 NMDFDSLLVALESHKVDTVISGMNITPERKK--SVDFSDPYYAGHKFFLINKADRNKYKS 161

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
               +G  +  Q G      + +               ++  +  A ++H+ +    D +
Sbjct: 162 TKDFTGKKVGAQNGAMEYNLVKENIP----NVQEKGLAKIPSLVLALQSHKVNGVLMDEA 217

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              A    N           I S   +A    +GD       + T  A +  E+L I +K
Sbjct: 218 TAKAYANNNSNLMTFNSHIKIQSGG-IAMVFPKGDKSLEAAANQTV-AKINKEDL-INKK 274

Query: 260 NINQVSKDTTNP 271
            I Q +K   + 
Sbjct: 275 WIPQAAKYMKSY 286


>gi|148560064|ref|YP_001258923.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|148371321|gb|ABQ61300.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
          Length = 177

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 7/151 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDKRKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
             Y    G    K   I   +   L+G +I 
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 146


>gi|256396802|ref|YP_003118366.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256363028|gb|ACU76525.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 323

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 71/221 (32%), Gaps = 19/221 (8%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IK +G +    +           NG+  G+DVD   A+++ +        +  +   +  
Sbjct: 74  IKGKGVITIATDPSYPPNESKDQNGNIVGWDVDMGNAIAAKLGLKA---NFTEVTFADIV 130

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQL--S 144
             + + + D    +      RE      F        +  +     K    +S + L   
Sbjct: 131 TGISTNKYDAGMSSITDNKTREGVD--DFVTYFNAGTKLMVPKGNPKNLTDNSPTDLSVC 188

Query: 145 GASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           G +I V+ GT  E             A       +  +  ++I+ +  + RCDA   D  
Sbjct: 189 GLTIGVEKGTVQEDPDIPTRNKACEAAGKPDIKTLSQDTQDQINESLSSGRCDAVLADSP 248

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +        +      + ++ S +P   AI + +      
Sbjct: 249 VVDYYA----KSGNFQAVGELYSGAPYGIAISKSNNGLSQA 285


>gi|154483129|ref|ZP_02025577.1| hypothetical protein EUBVEN_00830 [Eubacterium ventriosum ATCC
           27560]
 gi|149735937|gb|EDM51823.1| hypothetical protein EUBVEN_00830 [Eubacterium ventriosum ATCC
           27560]
          Length = 269

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 12/210 (5%)

Query: 37  KCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
             G +     +  + ++ G++ GFD++  +A+      +  K    P+    +   L + 
Sbjct: 38  TVGFDAEYPPYGYMDSDTGEYTGFDLELAQAVCDMEGWELVK---TPIEWASKDAELNNG 94

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
            ID +          +      +      + Q  ++ K  GI+ ++ L    +  Q+ + 
Sbjct: 95  NIDCIWNGFTINGKEDK---YEWSDPYVNNQQVVVVAKNSGITKLADLKDKYVAAQSASA 151

Query: 156 TELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
               L    D  K          F       +   A   DA   D     A    N+R +
Sbjct: 152 ALQLLQKGGDQEKLGKTFKEIQEFPDYNTAFSELEAGTVDAVAMD--VGVAKYQVNNRNN 209

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +VIL + ++         +G+TE  + V+
Sbjct: 210 NYVILDENLNSEQYGIGFKKGNTELRDKVN 239


>gi|121598329|ref|YP_992122.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Burkholderia mallei SAVP1]
 gi|124383730|ref|YP_001028568.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10229]
 gi|126450381|ref|YP_001081535.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10247]
 gi|251766548|ref|ZP_02264195.2| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei PRL-20]
 gi|254175476|ref|ZP_04882136.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei ATCC
           10399]
 gi|254202402|ref|ZP_04908765.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei FMH]
 gi|254207733|ref|ZP_04914083.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei JHU]
 gi|121227139|gb|ABM49657.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei SAVP1]
 gi|124291750|gb|ABN01019.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei NCTC
           10229]
 gi|126243251|gb|ABO06344.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei NCTC
           10247]
 gi|147746649|gb|EDK53726.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei FMH]
 gi|147751627|gb|EDK58694.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei JHU]
 gi|160696520|gb|EDP86490.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei ATCC
           10399]
 gi|243065404|gb|EES47590.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia mallei PRL-20]
          Length = 313

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 15/223 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDV   + +++ +   P   Q++   
Sbjct: 77  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDV--AKEVAARLGVKP---QFVTTE 131

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 132 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 189

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 190 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 244

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 245 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 286


>gi|199598208|ref|ZP_03211630.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|258508351|ref|YP_003171102.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|199590969|gb|EDY99053.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|257148278|emb|CAR87251.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259649665|dbj|BAI41827.1| amino acid ABC transporter permease and substrate binding
           components [Lactobacillus rhamnosus GG]
          Length = 485

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 83/255 (32%), Gaps = 24/255 (9%)

Query: 3   KDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56
           K + ++++ +     T           L  I+++G +  G +     +            
Sbjct: 5   KRWLIALVAVFAAIVTLNMQTVQADDSLAKIQQKGTIVMGTSPDYAPYEFLVNKNGKNQV 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DV+  R ++  +      +    +N     +ALQS ++D++      T  R     +
Sbjct: 65  VGMDVEVARKIAKDLGVK---LVIKQMNFSSLLVALQSGKVDMVLAAMSPTNARRK--SI 119

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F    Y  GQ  +++K            +   + VQ G+  E       K+       +
Sbjct: 120 DFSKTYYKSGQDILINKTDAKIYKDHKSFANKKVGVQNGSLQETLAKTQMKS----STTL 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISKSPLAPAI 230
              +V ++  A + H+      + +   A    +D+    P    +  D +     A   
Sbjct: 176 GLTKVTDLILALKTHKVAGVVAEGAVAEAYTSNDDKLVEIPGHFNLSSDTMGT---AIGF 232

Query: 231 IQGDTEWYNIVSWTH 245
            +G        + + 
Sbjct: 233 AKGSDSLVAAANKSL 247


>gi|239630723|ref|ZP_04673754.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239527006|gb|EEQ66007.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 484

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 93/309 (30%), Gaps = 21/309 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + + + +L  + L   +     S+      +     G +     F     +  + G D
Sbjct: 1   MKRKWLLGLLIALPLMLGALLPGKSVAA---AQKTYTIGTDVTFAPFEFANQDNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K++  PL       AL++KQID +      T  R          
Sbjct: 58  LDLIKAIAK---TEGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPER--QQKFLMSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + KK  I S+  L G  + V+ GT +          +      + F+   
Sbjct: 113 PYYKSGVVMAVAKKGTIKSLKDLRGKRVAVKTGTDSADYANSIKDKYGFST--VTFDDSN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A   D   +   +   +      I+     +     A  + +      
Sbjct: 171 NMYQDVITGNSAACFEDQPVM---QYGINNGMALKIIGKPAREGSYGFAASKNNRALITK 227

Query: 241 VSWTH--------YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            +           Y  +    LG       + +        + F G+ K++      GL 
Sbjct: 228 FNAGLKKLRANGQYDKIIERYLGNGSAKSQKTAAGNAQTTDRSFFGLLKTNWGTLMSGLE 287

Query: 293 KDWTYRIIR 301
           +     ++ 
Sbjct: 288 ETMVLTVVA 296


>gi|16265161|ref|NP_437953.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Sinorhizobium meliloti
           1021]
 gi|307308854|ref|ZP_07588542.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|307320316|ref|ZP_07599734.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|15141301|emb|CAC49813.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Sinorhizobium meliloti
           1021]
 gi|306894038|gb|EFN24806.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306900659|gb|EFN31271.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 258

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 72/219 (32%), Gaps = 17/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G       F  V ++G   GFDV+   AL   +  +    + +  +       L +
Sbjct: 24  KLKIGTEGAYPPFNFVDSSGKIGGFDVEIGLALCERMKVE---CEVVAQDWDGIIPGLLA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
           K+ D++  +   T  R+  +   F    Y         K  GI   S   L G  I  Q+
Sbjct: 81  KKYDMIIASMFITEERKKQVA--FTNPYYLAAMTHAAPKGAGISAFSNEALQGKVIGAQS 138

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT     ADY  A        ++   +E +      R D   GD+  L      ND   
Sbjct: 139 GTTQ----ADYIAAVYPDAEIKLYPTQDEANLDMVNGRLDLQVGDMLPLLDWVTKNDDGK 194

Query: 213 ------EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    I         +  A+ Q D E    ++   
Sbjct: 195 GCCELVGEPITDKKFVGDGVGIAVRQEDNEMREKLNKAL 233


>gi|85704453|ref|ZP_01035555.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. 217]
 gi|85670861|gb|EAQ25720.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. 217]
          Length = 280

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 89/236 (37%), Gaps = 13/236 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K    +I    +    SF+ +       ++ +RG L+ G+      +A     G  +G +
Sbjct: 5   KTLLGTIAITALTATASFAQDVVNDRFKEVLERGVLRVGVQGAFKPWAFRAPEGTIQGIE 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++  +      +     ++  R   LQ  ++D+L         R   +G+   P
Sbjct: 65  VDLAQTVADRMGVTLETVVI---SSANRMEFLQQGKVDLLIGAMSDRPDRRKVVGII-EP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   +  K+  ISS   + G  +C + G          F A+      + F    
Sbjct: 121 AYWTSGPTLM-AKEGVISSWDDIKGKPVCGKQGVFYNKIAEVEFGAN-----VVAFGGNT 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E   A R+ +C A+  D +++ A   + +    + +  D +  +P   A+   + +
Sbjct: 175 EAKEALRSGKCLAWVYDDTSIAADIASGEWDG-YEMPVDTVFSNPWGVAVPLEEKD 229


>gi|310641776|ref|YP_003946534.1| sulfur-containing amino acid abc transporter, sulfur-containing
           amino acid-binding protein tcyk [Paenibacillus polymyxa
           SC2]
 gi|309246726|gb|ADO56293.1| Sulfur-containing amino acid ABC transporter, sulfur-containing
           amino acid-binding protein TcyK [Paenibacillus polymyxa
           SC2]
          Length = 283

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 6/205 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M K F +  +  IIL      ++          G    +  G  T       +  NG+  
Sbjct: 1   MKKWFAILSVMAIILVLAGCGSSDDTSSASGSSGDVKKIIVGTGTQFKNVCFIDENGNLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+  + L   +     + ++  ++     L+L + +ID++S   +    RE      
Sbjct: 61  GFDVELIKELDKRL--PQYEFEFKTMDFGNLLLSLDAGKIDLVSHQMEKNPEREAKYLFN 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             P + F  +  +      I S+  L G  +     +     L +Y K H    + +   
Sbjct: 119 KNPYSIFLNRVAVAKDNNSIHSIDDLKGKKVLTSPTSNAAYVLKEYNKTHGDALNIVYTS 178

Query: 178 RVE-EIDAAYRAHRCDAYTGDISAL 201
               ++     + R DA      A 
Sbjct: 179 GAANDMVQQITSGRIDATVTTDFAN 203


>gi|300690618|ref|YP_003751613.1| cyclohexadienyl dehydratase precursor [includes: prephenate
           dehydratase ; arogenate dehydratase] [Ralstonia
           solanacearum PSI07]
 gi|299077678|emb|CBJ50314.1| Cyclohexadienyl dehydratase precursor [Includes: Prephenate
           dehydratase ; Arogenate dehydratase] [Ralstonia
           solanacearum PSI07]
          Length = 267

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 75/261 (28%), Gaps = 18/261 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M+  F    ++L    +   + +   + L +I  RG L+ G       F+     +G + 
Sbjct: 1   MFVRFIRSTALLLCACVAAPALAQTTNRLDEILARGTLRIGSTGDYKPFSYKTPGDGRFI 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+    L+ A+      +                 + DI       TL R+      
Sbjct: 61  GLDVEMGERLAKALGVKLEVVP---TTWSTLMRDFGEDRFDIAMSGISVTLERQK--KAF 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +      DG+  I   +      +       G    V  G T E    ++ K        
Sbjct: 116 YSIPYQRDGKTPIARCENKDKFQTLEQIDQPGVRAVVNPGGTNEKFAREHLKQA----QI 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            V+     I     A R D    D      L+         V        S  A  + + 
Sbjct: 172 RVYPDNVTIFNEIVAGRADLMMTDAVETR-LQQKLHPELCAVHPDAPFDFSEKAYLLPR- 229

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           D  + N V       + + E 
Sbjct: 230 DVVFKNFVDQWLRQTMESGEF 250


>gi|261213025|ref|ZP_05927309.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
 gi|260838090|gb|EEX64767.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
          Length = 278

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 77/243 (31%), Gaps = 12/243 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + + +   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVANDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G      K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           K               V+             +    K   + F+   +           A
Sbjct: 138 KLAEGFAKLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAM 248
                       + +      +   + +SK   A A+  G+ +        I   T    
Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGW 256

Query: 249 VTA 251
           + A
Sbjct: 257 LQA 259


>gi|330999261|ref|ZP_08322978.1| putative cyclohexadienyl dehydratase [Parasutterella
           excrementihominis YIT 11859]
 gi|329575119|gb|EGG56670.1| putative cyclohexadienyl dehydratase [Parasutterella
           excrementihominis YIT 11859]
          Length = 289

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 81/249 (32%), Gaps = 13/249 (5%)

Query: 1   MYK-DFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55
           M       SIL L +   T+       A  L  IK  G L  G        + +    G 
Sbjct: 28  MKHGKLVTSILVLSLAAVTAAFASMAEARSLEQIKVSGELLVGSTGDYKPMSYLNKETGK 87

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++GFD +  ++L+  +      ++Y+P   K       + + D+       T  R+  + 
Sbjct: 88  YEGFDAEMAQSLAKYLGVK---LKYVPTTWKTLQADTMADKFDVAMSGITVTDARKKVMT 144

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           ++   +T+        +K      ++ ++  ++ V            + K    K   ++
Sbjct: 145 MSDGYLTFGKTILVTKNKAGQFKELNDVNQPTVRVMYNPGGTN--EKFAKEMTPKAQLMM 202

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGD 234
            E   EI       + D    +   + A +   D P     L D           + QG 
Sbjct: 203 HEHNAEIPGLVGEGKADVMITET--MEARRYAKDNPKVAAPLVDKPFTENHFGILMKQGY 260

Query: 235 TEWYNIVSW 243
            +    V+ 
Sbjct: 261 PKLEAAVND 269


>gi|289168773|ref|YP_003447042.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
 gi|288908340|emb|CBJ23182.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
          Length = 276

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 14/254 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAASKKEIIVATNASPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVNNISYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H+     + 
Sbjct: 116 LYAAPTAKNPNVLVVKKDDSSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHSDNPTVLN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + +
Sbjct: 176 YTKADFQQIMGRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAK 234

Query: 233 GDTEWYNIVSWTHY 246
           G  E    V     
Sbjct: 235 GQDELKTFVDKRIQ 248


>gi|78062810|ref|YP_372718.1| glutamine ABC transporter periplasmic protein [Burkholderia sp.
           383]
 gi|77970695|gb|ABB12074.1| L-glutamine-binding protein [Burkholderia sp. 383]
          Length = 250

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 17/219 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +   +A           L  G +T  + F   + +  + GFD+D    ++        
Sbjct: 16  LGASLAHADT-------KTLVVGTDTSFMPFEFKQGD-KYVGFDLDLWAEIAKDQGWKY- 66

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
                P++      ALQ++ ID+          R+ ++  +  P         +      
Sbjct: 67  --TIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDFS-APYYDSGLAAMVQADNTT 123

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+  L+G  I  + GT T     D+ KAH        F  +++   A  A R DA   
Sbjct: 124 IKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNIDQAYLALEAGRVDA-AM 178

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +      + N+   +  +    +S         +G  
Sbjct: 179 HDTPNVLFFVNNEGKGKVKVAGQPVSGDKYGIGFPKGSP 217


>gi|291482731|dbj|BAI83806.1| hypothetical protein BSNT_00599 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 287

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 70/262 (26%), Gaps = 21/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSF-----STNASI-LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    S      L   +      + +       IK +G +    +  L   + 
Sbjct: 1   MKSFKQSKAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSY 60

Query: 50  VKAN---GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +       G++V+  R  +  +     K+++  +       A+ S Q+D  + + D 
Sbjct: 61  HDTDSGSDKLTGYEVEVVREAAKRLG---LKVEFKEMGIDGMLTAVNSGQVDAAANDIDV 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  RE     +      +           GI ++  L G      A T       +  + 
Sbjct: 118 TKDREKKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTVYM----EVARK 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +  K         E+        R D    D              +  +        +  
Sbjct: 174 YGAKEVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQ 233

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           A  + + +      ++     M
Sbjct: 234 ALVMKKSNEALQKKMNEALKEM 255


>gi|83749068|ref|ZP_00946074.1| Cyclohexadienyl dehydratase precursor [Ralstonia solanacearum
           UW551]
 gi|207742528|ref|YP_002258920.1| cyclohexadienyl dehydratase precursor protein [Ralstonia
           solanacearum IPO1609]
 gi|83724258|gb|EAP71430.1| Cyclohexadienyl dehydratase precursor [Ralstonia solanacearum
           UW551]
 gi|206593920|emb|CAQ60847.1| cyclohexadienyl dehydratase precursor protein [Ralstonia
           solanacearum IPO1609]
          Length = 267

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 75/262 (28%), Gaps = 18/262 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57
           M+  F    ++L    +   + +   + L +I  RG L+ G       F+     +G + 
Sbjct: 1   MFVRFIRSTALLLCACVAAPALAQTTNRLDEILARGTLRVGSTGDYKPFSYKTTGDGRFI 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+    L+ A+      +                 + DI       TL R+      
Sbjct: 61  GLDVEMGERLAKALGVKLEVVP---TTWSTLMRDFGEDRFDIAMSGISVTLERQK--KAF 115

Query: 118 FRPITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +      DG+  I   +        +     G    V  G T E    ++ K        
Sbjct: 116 YSIPYQRDGKTPIARCENKDKFQTLAQIDQPGVRTVVNPGGTNEKFAREHLKQA----QI 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            V+     I     A R D    D      L+         V        S  A  + + 
Sbjct: 172 RVYPDNVTIFNEIVAGRADLMMTDAVETR-LQQKLHPELCAVHPDAPFDFSEKAYLLPR- 229

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  + N V       + + E  
Sbjct: 230 DVVFKNFVDQWLRQTMESGEFA 251


>gi|253583350|ref|ZP_04860548.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
 gi|251833922|gb|EES62485.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
          Length = 250

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L  L F +                L  G N     +  +  +G   GFD
Sbjct: 1   MKKLMLIFTLFLSTLSFAA--------------KKLYVGTNAEFKPYEYL-EDGKMIGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +     L   +  +   I+++ ++      ALQ K+ID +      T  R+ ++  +   
Sbjct: 46  IGVMDELGKKLGYE---IEWVNMSFDGLLPALQMKKIDAVIAGMSQTPERQKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I +      I+++     +   L G +  VQ G+  E        A N    P ++    
Sbjct: 103 IFFTSEHYVIVNENSTFKTKEDLKGKTAGVQMGSMQEQF------AINNGSIPKLYNTFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +  + D      ++      T D+  +   + D    + +A    + D E    
Sbjct: 157 NALMDLQNGKVDCVIIADNSGKEYLKTMDKIKKIDAIIDPKPGASIA--FRKSDKELAEK 214

Query: 241 VSWTHYAMVTAEEL 254
            S     + T +E 
Sbjct: 215 FSNAIVELKTTKEY 228


>gi|299821268|ref|ZP_07053156.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Listeria grayi DSM 20601]
 gi|299816933|gb|EFI84169.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Listeria grayi DSM 20601]
          Length = 284

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 81/248 (32%), Gaps = 9/248 (3%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K + + +   L+ L  +            K+   +  G  T       +  NG   G+
Sbjct: 17  MRKKWRIILGAILLALVLSGCGAKGEASSGPKQ---VIIGTGTQFPNICFIDKNGKLTGY 73

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA+   +     + ++  ++      +L +++ID+++ N      RE        
Sbjct: 74  DVEVMRAIDKKL--PDYQFKFKTMDFANLLTSLANRKIDVVAHNMAKNKEREKQFLFNQE 131

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER- 178
           P  Y             I ++  L+G ++ V A +     + +Y K ++ K H     + 
Sbjct: 132 PYNYSPLYITTKKSNNSIHTLDDLNGKNVIVGATSNAADYIRNYNKKNDNKIHLRYAGQG 191

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        R DA T         +       +  +   I+          + + +  
Sbjct: 192 SNDAANQIETGRADA-TLSTPFAVDFQNKTQSAKQKTVGKVILDTKVY-FIFAKNNKKLA 249

Query: 239 NIVSWTHY 246
           + V     
Sbjct: 250 DEVDTAIK 257


>gi|158424359|ref|YP_001525651.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
 gi|158331248|dbj|BAF88733.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
          Length = 277

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 71/239 (29%), Gaps = 16/239 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
            +  A I  +IK RG +   +              G   GFD+    AL+  +     K+
Sbjct: 20  AAGAAEIPAEIKARGTITVAVIPNYPPLEFKDPATGQLSGFDIALGNALAEKLG---LKM 76

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136
           Q+   + +    AL++ ++DI+         R    G +F       G  F         
Sbjct: 77  QWQETSFEAMLPALKTGRVDIILSGMSDLPTR--RDGASFID-YLRSGTQFFTQASRASE 133

Query: 137 ISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
             +   L G  +     T+    + D                +  E   +     R  R 
Sbjct: 134 FPNREALCGQKVGASRRTSLPGVIKDFSDTACVGTGKPAIVVVGTEGSADARTQLRQGRI 193

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           DA       L  +         + ++ +    + +  A  +  T   + ++     ++ 
Sbjct: 194 DAAMQGDETLPYIMAQEPN--TYALVGEPTRWTLMGLATNKEATGLRDALADALRGLIA 250


>gi|237736371|ref|ZP_04566852.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421413|gb|EEO36460.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 256

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  L F +                L  G N     +  +  NG   GFD
Sbjct: 6   MKKVILFLMLILSSLSFAA--------------KKLYVGTNAEFAPYEYL-ENGKMVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+   +  +   I +  ++      ALQ K+ID +      T  R+    + F  
Sbjct: 51  IELMDAIGEELGYE---IVWSNMSFDGLLPALQMKKIDAVIAGMSQTPERQK--AVTFSM 105

Query: 121 IT---YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                  D    I++++       +L+G  I VQ GT  E    D      +   P ++ 
Sbjct: 106 PYLLFSSDEHYVIVNEESSYVKKEELNGKKIGVQIGTMQEEFAKD------LGGLPQLYN 159

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                    + ++ DA      +      T     +  ++ +    + +A  + +G+TE 
Sbjct: 160 SWTGALMDLQQNKIDAVIIADVSGEEYLKTMKGIKKIDVVEENFPGASIA--LRKGETEL 217

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 218 AEQINQAI 225


>gi|209558800|ref|YP_002285272.1| Putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes NZ131]
 gi|209540001|gb|ACI60577.1| Putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes NZ131]
          Length = 498

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 87/296 (29%), Gaps = 38/296 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 110 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEEL----GITQKNINQVSKDTTNPDVQR 275
            A   +  + + +    V+         + +     +  K   +   +     + R
Sbjct: 224 YAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEHAKAYISR 279


>gi|194398103|ref|YP_002037841.1| ABC transporter amino acid-binding protein/permease [Streptococcus
           pneumoniae G54]
 gi|194357770|gb|ACF56218.1| ABC transporter, amino acid-binding protein/permease protein
           [Streptococcus pneumoniae G54]
          Length = 721

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  XDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   IS   QL+G ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   DA   D   +         
Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452


>gi|317484904|ref|ZP_07943793.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316923842|gb|EFV45039.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 247

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 9/216 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +        +  + +  GF +D+ +A+      D   +Q   +     F AL S 
Sbjct: 25  LVVASDPTFPPNEMLNKDKEIVGFSIDYIKAVGKEAGFD---VQVKNIAWDGIFAALASN 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q+D+++ +   T  R+    + F    Y   Q  ++   K I  + +L+G  +  Q GTT
Sbjct: 82  QVDVIAASVSITDKRKK--AMLFTDPYYELHQAVVLPLGKEIKDLEELAGKRVGGQIGTT 139

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +     A  +K     ++ V            DA   D         T D   +  
Sbjct: 140 A---MVQTIPASKIKMIVKTYDEVGLAFEDLAKGNLDAVMCDDPVAKYYANTKDEYRDKF 196

Query: 216 ILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +            A+ + D E    ++    A+  
Sbjct: 197 HIGLVTGEPEFYGFALRKNDKELAQKLNAGIKAVQE 232


>gi|290969115|ref|ZP_06560643.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Megasphaera genomosp. type_1 str. 28L]
 gi|290780835|gb|EFD93435.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Megasphaera genomosp. type_1 str. 28L]
          Length = 259

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F +    I     +    +S             G+      F     + ++KGFD
Sbjct: 2   MNKKYFAAAAVAITTVAFAAGCGSSPSSQENTDKTFTVGLEPTFPPFEFADND-NFKGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF +A+   +      ++   +       AL+S QID+++   D T  R   +   F  
Sbjct: 61  IDFAQAICDKMGVK---LEIKNMGFDALIPALKSGQIDMIASGMDATPERSKQVA--FTK 115

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             + DG   ++ K    I     L+G ++  Q GT       D  +A         ++  
Sbjct: 116 PYFHDGYVVVVRKDNTAIQGFESLAGKTVGSQVGTQGV----DLGQAAG--AKVKQYDAN 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +         CDA   + S               +     ++  P+A A+ +G+     
Sbjct: 170 SQGWMELNNKTCDAVIINKSVALYYLQQGGNKDLKIAGKAKLAPDPVALALQKGNDAQLA 229

Query: 240 IVSWTH 245
            V+   
Sbjct: 230 KVNKAI 235


>gi|12056612|gb|AAG47969.1| mimosine-binding periplasmic protein [Rhizobium sp. TAL1145]
          Length = 281

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 92/253 (36%), Gaps = 13/253 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   +S + L+     S + + ++   +K  G L          F+ +  +G   G  V
Sbjct: 4   IKSAILSTVALVASATVSLAGDIALPSYVKDSGKLPIATTI-YAPFSYIDESGKQVGLSV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A +  +  +   +    +       +L + +I I   N   T  R       F   
Sbjct: 63  ELAQAAAKELGVE---LTIDQVPFTSLIPSLGADRIKIAWLNASVTEER--LKQADFVSW 117

Query: 122 TYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMK-YHPIVF 176
                    +   K   +  ++L GA++ VQ+GT    +   + +  KA  +K +   ++
Sbjct: 118 MEDGTIISTLPENKDKYAKRTELCGATVAVQSGTAADFSADQVNEECKAAGLKEFKKDIY 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              ++   A    R DAY  D S          +    V+  ++  K P+   I +GD E
Sbjct: 178 PSQQDTVQAVITGRADAYLDD-STSAGYYSQVSKGK-LVLTGEVFHKKPIGHIIKKGDAE 235

Query: 237 WYNIVSWTHYAMV 249
              +++     ++
Sbjct: 236 TATMLAAAIQKLI 248


>gi|254224689|ref|ZP_04918305.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
 gi|125622752|gb|EAZ51070.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
          Length = 278

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 20/247 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + + +   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++    
Sbjct: 24  AFTLPAVANDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G     +K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137

Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           K  +G S +   +     I  + G  T     + F         + F+   +        
Sbjct: 138 KLAEGFSKLEDFNKRDVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244
              A            + +      +   + +SK   A A+  G+ +        I   T
Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRT 252

Query: 245 HYAMVTA 251
               + A
Sbjct: 253 ADGWLQA 259


>gi|296159778|ref|ZP_06842600.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295889992|gb|EFG69788.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 260

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 72/221 (32%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++ G++     F    A+G   GFD+D    +   +    +   ++         
Sbjct: 23  KDWSTVRFGVDASYPPFESKAADGKLVGFDIDLGNEICRRL---NANCVWVENAFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL+ ++ D +      T  R+  +   F    +      +  K   I  +   L G  I 
Sbjct: 80  ALKGRKFDGVLSTMSMTPARQAQIA--FSSKVFRIPTRLVAKKGSTITPTPEALKGKRIG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+  E     Y++        + ++  + + +   A R DA   +        L   
Sbjct: 138 VEQGSIQETYAKTYWEPAG--AAIVSYQDQDLVYSDLIAGRIDASLQNAVQADVGFLRTP 195

Query: 210 RPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
           R  +     + +  +       A  + + DT+    +    
Sbjct: 196 RGKDFAFAGNPLYDAKTLGSGTAIGLRKEDTDLKAKIDKAI 236


>gi|238761692|ref|ZP_04622667.1| ABC transporter, solute-binding component [Yersinia kristensenii
           ATCC 33638]
 gi|238700206|gb|EEP92948.1| ABC transporter, solute-binding component [Yersinia kristensenii
           ATCC 33638]
          Length = 272

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 75/238 (31%), Gaps = 13/238 (5%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +      F++ + +A +L  IK    +          F  V  NG   G+DVD    +  
Sbjct: 1   MLCAASAFSATAHSADLLDKIKADKTITIATEARYAPFESV-ENGKIVGYDVDLMNHILQ 59

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
                  +++ L L  +     L +K+ D +         R      AF           
Sbjct: 60  KNL-PGVEVKQLDLPFQGILPGLDAKKFDFVVTAVTVNKQR--MDHFAFTVPIAESTVAL 116

Query: 130 IMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-----IVFERVEEID 183
           +       I+++  LSG  +  QAG+     L ++ +       P       +   +E  
Sbjct: 117 LKRNNDSSINTLDDLSGKVVGSQAGSGQLQVLQEFNEKLKASGKPGIKEIKQYVSFDEAY 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNI 240
           A     R D     ++ L  L     RP     L P +   +       +GD     +
Sbjct: 177 ADLANQRLDGVAQSLANLGPLI--KARPGIFTTLKPMLGPTTYFGWVGRKGDDSATLV 232


>gi|116255275|ref|YP_771108.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259923|emb|CAK03017.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 276

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 11/235 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
              A    +IK RG +  GI      +  V + G   G D D     +  +      +++
Sbjct: 27  PAAAITPDEIKARGKIIVGIQGDNPPWGFVTSGGKQDGLDADIATLFAKELG---VAVEF 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL    R  AL + ++D+L        L + +  + F      +    I  K   I + 
Sbjct: 84  VPLEVNNRIPALTAGRVDVLFATMAM--LPDRAKAVQFSKPYVANAIVLIGPKSAEIKTN 141

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             ++  ++ V  G   +  +               ++       A  + + +   G+   
Sbjct: 142 DDMAKFTVGVAKGAAQDTQVTKNAP---PSTTIRRYDGDAASVQALVSGQVETLGGN--I 196

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            Y  ++   RP E     +   K         G+ E    ++     +    EL 
Sbjct: 197 FYMDRVEKARPGEFENKLE-FQKLYNGACTRLGEKEINAALNTFIDKIKANGELK 250


>gi|163735168|ref|ZP_02142604.1| putative extracellular solute-binding protein [Roseobacter
           litoralis Och 149]
 gi|161391626|gb|EDQ15959.1| putative extracellular solute-binding protein [Roseobacter
           litoralis Och 149]
          Length = 276

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK- 57
           M +   ++      +        A  S +  ++  G L+ G+      +++   +G+W  
Sbjct: 2   MKRRTVLAAAIAATVMGAGTVAQAQDSTMAQVRDNGVLRVGVTQAPPWYSKDIISGEWTG 61

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G  V   +A++  +  +   ++   +       ALQ+ +ID L    D T  R+ ++   
Sbjct: 62  GLGVSMGKAMAETLGVEFEPVE---VTWGTAVAALQADRID-LMFVLDATDARKEAVNFP 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             P+  +     +      I+  + L+ + I V        ++  +   +        F 
Sbjct: 118 ETPL-LYYSLAVLARDDLEITDWADLNSSDISVSVP--QATSMDAFLTENAPNADIQRFP 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTE 236
              E  AA++A R DA T     L A +         +I+P  +   P + A+ Q  D  
Sbjct: 175 GNAEAIAAFQAGRVDAVTLFHPPLIAARQKLGSGQ--IIVPQPVESRPSSVAVRQETDPA 232

Query: 237 WYNIVSWTHYA 247
           + N V+     
Sbjct: 233 FVNWVNEQIDG 243


>gi|145301210|ref|YP_001144051.1| ABC-type polar amino acid transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142853982|gb|ABO92303.1| ABC-type polar amino acid transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 252

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 83/249 (33%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +     I+L   S    A           +K G++     F  VK +   +GF+
Sbjct: 1   MTSSIKLVSGAAILLAALSGQAIAQE--------TIKVGMSGKYFPFTFVKQD-KLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +          ++++  +    F  L++ ++D +S     T  R+     AF  
Sbjct: 52  VDMWNQIGERTGYK---VEFVTASFSGLFGMLETGRVDTISNQITITDERKA--KYAFSQ 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   ++ K    I  +  L G ++ V  G+  E  L       N K     ++  
Sbjct: 107 PYVYDGAQIVVRKGNSTIHGIKDLEGKTVAVNLGSNFEELLRKNDP--NKKIDIRTYDSS 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E D A    R DA+  D  +   L   +  P +    P    ++ L             
Sbjct: 165 FEQDVAL--GRIDAFVMDRVSTAQLIKESKLPLQQAGAPFETIENALPFLKTPEKQALLK 222

Query: 240 IVSWTHYAM 248
            V     AM
Sbjct: 223 KVDDALTAM 231


>gi|33592314|ref|NP_879958.1| solute-binding protein [Bordetella pertussis Tohama I]
 gi|33596427|ref|NP_884070.1| solute-binding protein [Bordetella parapertussis 12822]
 gi|33566196|emb|CAE37102.1| probable solute-binding protein [Bordetella parapertussis]
 gi|33571959|emb|CAE41480.1| probable solute-binding protein [Bordetella pertussis Tohama I]
          Length = 238

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 13/239 (5%)

Query: 38  CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           CG       F+   A      G+DVD C+ ++  +      + Y  L+   R   L   +
Sbjct: 3   CGTLGTSQPFSYQDAATRTVVGYDVDMCKLVADKLGVK---VNYKLLSVAARVPELNESR 59

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           +DIL+ N       E +  +AF    Y   Q  ++ K   + ++  ++G  +    G+++
Sbjct: 60  VDILAANLG--YSPERAEQIAFSHTYYVSPQKLLVRKDSNLQTIESVNGRRVAATKGSSS 117

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E  +             + F        A +  + DA       L  L L +   +   I
Sbjct: 118 EREIKRILDK----SQVLGFTDSSASYLALQQKKVDAQFASELVLVRLMLQSPPTAPVSI 173

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
           +   +   P    + + +T +   V+        AE  G  Q+   +     T   +QR
Sbjct: 174 IDKAVFDEPWGLGMRKSETRFIAKVNEILD---QAEASGEAQRLFEKWFGAQTPYKLQR 229


>gi|325168929|ref|YP_004280719.1| deoxyfructosyl-amino acid transporter periplasmic binding protein
           [Agrobacterium sp. H13-3]
 gi|325064652|gb|ADY68341.1| deoxyfructosyl-amino acid transporter periplasmic binding protein
           [Agrobacterium sp. H13-3]
          Length = 277

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 80/244 (32%), Gaps = 9/244 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
            + + L +L   +    A     +     +  G       +A   A+G++ GFD++    
Sbjct: 18  TAAITLSVLAGAATPALADNPLGLIDPATISVGTMGDAKPYAFTTADGNFTGFDIELFLN 77

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +     ++ +          ++ + + D+ +     T  R+ +  + F        
Sbjct: 78  VAERLGFKKEQVVFTGQEFSALMPSVANGRFDVAAAAIGTTAKRKET--IDFSDGYLAGF 135

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              +   + GI+  + L G  + V  GT  E+     F    +    + F       +A 
Sbjct: 136 LSVLT-SEPGITDAAGLKGKRLGVVQGTLQEIYAEKNF----VGTDLVKFPDNNSAVSAL 190

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                DA+  D     A   +   P+  V +      +P    I +G+      ++    
Sbjct: 191 NNGTVDAHFLDFE--AAKDYSARYPALKVAVNIPSFDAPAGFVIRKGNDALREALNKGLK 248

Query: 247 AMVT 250
             + 
Sbjct: 249 EAMQ 252


>gi|227548108|ref|ZP_03978157.1| ABC superfamily ATP binding cassette transporter, substrate-binding
           protein [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079834|gb|EEI17797.1| ABC superfamily ATP binding cassette transporter, substrate-binding
           protein [Corynebacterium lipophiloflavum DSM 44291]
          Length = 298

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 92/291 (31%), Gaps = 38/291 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---------------------ILGDIKKRGFLKCG 39
           M K + V+ +    L  TS  TNA                      +   +   G L  G
Sbjct: 1   MRKSYSVAAVVGSALLLTSCVTNAEGGNPEGWEPVEVEAVPEIAAMVPESVAADGKLSVG 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            N     F    + G+  G ++D  RAL+  +  +        ++      A+Q+  +D 
Sbjct: 61  TNPPFAPFEFKDSTGNLIGVELDLGRALAQVMGLEFDP---QEMDFSMILPAVQAGSLDA 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
                  T  R       F    Y   Q     +       +   G ++ VQ  T +E  
Sbjct: 118 GMSGFTDTEER--RESYDFVDFLYAGIQ--WAQQPGNDVDPANPCGLTVAVQRTTVSETD 173

Query: 160 -----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                      A       + F+  +    A    R DA++ D          +D   + 
Sbjct: 174 DVRPKSDACAAAGEDPITVLSFDTSDNAALAALTGRADAFSADSPVTAWAVERSD--GDL 231

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQ 263
            ++ ++   +P   A+ + ++E    ++     ++   E    + Q NI+ 
Sbjct: 232 ELVGEMFDAAPYGIAVNK-NSELGPALAAAMQHLIDTGEYARILNQWNIDS 281


>gi|167620969|ref|ZP_02389600.1| cyclohexadienyl dehydratase [Burkholderia thailandensis Bt4]
          Length = 264

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 80/271 (29%), Gaps = 23/271 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M     +  L     F  + +          AS L D+  RG L+         +   + 
Sbjct: 1   MKMKITLLALACCAGFAHAQAAREHAAPAMPASRLDDVLARGTLRVCTTGDYKPYTYRRE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G ++G D+D   +L+ ++    + ++       + F+A    + DI       TL R+ 
Sbjct: 61  DGAFEGIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQK 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
              + F      DG+  I+           +        + V  G T E     +F    
Sbjct: 117 H--VFFTQPYVTDGKTPIVRCADVERYQTIAQIDQPQTRVIVNPGGTNERFAKQHF---- 170

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                 VF     I     A   D    D S    L+   +     V           A 
Sbjct: 171 THARITVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAY 229

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            + +GD  +   V    +      EL     
Sbjct: 230 MVPRGDVVFQQYVDQWLHLARETGELQAISD 260


>gi|70732344|ref|YP_262100.1| basic amino acid ABC transporter periplasmic basic amino
           acid-binding protein [Pseudomonas fluorescens Pf-5]
 gi|68346643|gb|AAY94249.1| basic amino acid ABC transporter, periplasmic basic amino
           acid-binding protein [Pseudomonas fluorescens Pf-5]
          Length = 257

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 83/256 (32%), Gaps = 21/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGF 59
           M     V     +     S +  A           +  GI       F+    NGDW GF
Sbjct: 1   MKNLLKVLATGCLFSALASHAVAAD---------KIVFGIALEPYPPFSMKSGNGDWSGF 51

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +  +AL   +    ++     +       ALQS QID +  +   T  RE  +  +  
Sbjct: 52  EPELIKALCDRM---QAQCPLKEVAWDGLIPALQSSQIDAILNSLSITDEREKVIDFS-A 107

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P              + +++   L G  I VQ  T+       Y+           +   
Sbjct: 108 PYYQTPAMWVADQSLELVTTPEGLKGKLIGVQGSTSNATFAKTYY---GKTSTLRYYTTQ 164

Query: 180 EEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTE 236
           +++ A  ++ R D    D  +    LK           L   D +  S +   + +GD+ 
Sbjct: 165 DDMIADLQSGRIDVMLADALTIEPILKTAAGAGLADKGLAPKDPLFGSGIGVGLRKGDSA 224

Query: 237 WYNIVSWTHYAMVTAE 252
               ++    A + A+
Sbjct: 225 LQQRINTAL-ASLKAD 239


>gi|238895147|ref|YP_002919882.1| amino acid ABC transport system periplasmic binding component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|262044226|ref|ZP_06017294.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330012759|ref|ZP_08307484.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|238547464|dbj|BAH63815.1| amino acid ABC transport system periplasmic binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259038417|gb|EEW39620.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328533719|gb|EGF60412.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 255

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 71/212 (33%), Gaps = 7/212 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G       F    +    +GFD+D  +A++ A   D   ++ +    +  F  L +
Sbjct: 25  TYTVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAKAEGFD---VKLVNTPWEGIFATLNT 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              DI+      T  R+    + F    +   Q  ++ +   + S++ L    + V   +
Sbjct: 82  GDRDIIISGITITDKRKQM--VDFSAPYFPAEQSIVVAQDSQVDSLAALKNEKVGVVNSS 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T ++ +++    +        F+    +          A  GD+  +      +      
Sbjct: 140 TGDIVVSEVLGKN--STAIKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQHPEKQFK 197

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           ++      +     A+ +G++E    ++    
Sbjct: 198 LVPDAKFERQYFGIAVAKGNSELLGKINAGLQ 229


>gi|237808389|ref|YP_002892829.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
 gi|237500650|gb|ACQ93243.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
          Length = 256

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 60/206 (29%), Gaps = 22/206 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGF 59
           M       ++ L  L  T+                ++ G++      F    A+G W G+
Sbjct: 1   MKARLTAGLIALACLTSTAAHA------------EIRFGVSNEAYPPFYTKDASGKWAGW 48

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   AL   +     K   + +        L++ +ID++  +      R+  +   F 
Sbjct: 49  EIDLMHALCDEM---KEKCTIVDMTWDGLIPGLKANKIDVIWSSMSINEERKKVIA--FT 103

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      +  K      +   L    I     +        ++           +  
Sbjct: 104 DKYYNTPTEIVGLKDAPQKVTKDDLKDKIIGTYVSSIQSAYFKKHYS---DIATEKNYPT 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYAL 204
           ++E      + R D    D   L A 
Sbjct: 161 LDESLQDLVSGRVDYVIADSIPLAAF 186


>gi|290580362|ref|YP_003484754.1| putative ABC transporter amino acid binding protein [Streptococcus
           mutans NN2025]
 gi|254997261|dbj|BAH87862.1| putative ABC transporter amino acid binding protein [Streptococcus
           mutans NN2025]
          Length = 230

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 70/236 (29%), Gaps = 13/236 (5%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K FF++  L L  +F  + S ++         I KRG LK      L   +    +  
Sbjct: 1   MKKHFFMTFSLLLAAVFLVACSKSSDSGQRNWDKINKRGMLKIATAGTLYPQSYHDDHNK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV+  + +   +     K+Q+  +       A++S QID+ + + +          
Sbjct: 61  LTGYDVEILKEIGKRLG---LKVQFTEMGVDGMLTAIKSGQIDVANYSLEDGNKNISKFL 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                   F           GI S S + G      A T          K    K     
Sbjct: 118 RTSPYKYSFTSMVVRSKDDSGIHSWSDIKGKKAAGAASTNYMKI----AKKLGAKLVVYD 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +         R D    D                 + +   +  +P + ++ 
Sbjct: 174 NVTNDVYMKDLVNGRTDVIINDYYLQKIAVAAVKDKYA-IKINQGLYANPYSTSLH 228


>gi|300703224|ref|YP_003744826.1| cyclohexadienyl dehydratase [Ralstonia solanacearum CFBP2957]
 gi|299070887|emb|CBJ42189.1| Cyclohexadienyl dehydratase precursor [Includes: Prephenate
           dehydratase ; Arogenate dehydratase] [Ralstonia
           solanacearum CFBP2957]
          Length = 267

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 75/262 (28%), Gaps = 18/262 (6%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M+  F    ++L    +   + +   + L +I  RG L+ G       F+     +G + 
Sbjct: 1   MFVRFIRITALLLCACVAAPALAQTTNRLDEILARGTLRVGSTGDYKPFSYKAPGDGRFI 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+    L+ A+      +                 + DI       TL R+      
Sbjct: 61  GLDVEMGERLAKALGVKLEVVP---TTWSTLMRDFGEDRFDIAMSGISVTLERQK--KAF 115

Query: 118 FRPITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +      DG+  I   +        +     G    V  G T E    ++ K        
Sbjct: 116 YSIPYQRDGKTPIARCENQDKFQTLAQIDQPGVRAVVNPGGTNEKFAREHLKQA----QI 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            V+     I     A R D    D      L+         V        S  A  + + 
Sbjct: 172 RVYPDNVTIFNEIVAGRADLMMTDAVETR-LQQKLHPELCAVHPDAPFDFSEKAYLLPR- 229

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  + N V       + + E  
Sbjct: 230 DVVFKNFVDQWLRQTMESGEFA 251


>gi|317053913|ref|YP_004117938.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316951908|gb|ADU71382.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 280

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 73/274 (26%), Gaps = 40/274 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + + +++L  ++           K  G LK         F +   +G   G++
Sbjct: 1   MRKGLFTASVGMLLLATSALVQA-------KDFGTLKFATEAAYPPFNQSTPSGKIVGYE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L+  +      +             L   + D +      T  RE    + F  
Sbjct: 54  PDMVAELAKRVGFKYELVA---QKWSGMIPGLVDGKYDAVVDAVTVTPKREEV--VDFTH 108

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                  GF+  K   + ++                        +  G +I VQ  T   
Sbjct: 109 QYTVSVSGFVTLKGSALDTLPGNNEVVTAGDEAGMTKAIDALRAKFKGKTIAVQVATIQA 168

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L  Y            ++   E  A     R DA     + L A    +         
Sbjct: 169 DFLNKYLA---DVATIRTYQGGPETFADLLNGRVDAVMASRTNLNAYVKKHTDTVNSTGY 225

Query: 218 PDIISKSPLA--PAIIQGDTEWYNIVSWTHYAMV 249
             +          A+ + + E    +     AM+
Sbjct: 226 GFVGGVLGQGSAIALRKNNPELKAALDAALVAMI 259


>gi|78064777|ref|YP_367546.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77965522|gb|ABB06902.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 262

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 78/253 (30%), Gaps = 24/253 (9%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M       ++      +   +   +A           L+ G+      F     NGD +G
Sbjct: 1   MKHTATLKLAFALACAIGSGAALADAQT---------LRFGLEAQYPPFESKAPNGDLQG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+           +++  +      ALQ ++ D ++   + T  R     + F
Sbjct: 52  FDIDVGNAVCK---TAQLSCKWVETSFDGLIPALQGRKFDAINSAMNATEQR--RQAIDF 106

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             I Y      I     G + +   L G  + V   +  E     +++   +    + ++
Sbjct: 107 TTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETFAKAHWEPAGVA--VVAYQ 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQ 232
              +  A   + R DA      +     L+         +   +         +A  + +
Sbjct: 165 DQNQAYADLVSGRLDATLVLAPSGQRGFLSRPDGKGFSFVGQPVRDDKILGSGIAFGLRK 224

Query: 233 GDTEWYNIVSWTH 245
           GD+     +    
Sbjct: 225 GDSALKAKLDAAI 237


>gi|260575378|ref|ZP_05843377.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
 gi|259022298|gb|EEW25595.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
          Length = 266

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 88/249 (35%), Gaps = 12/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +  F +I   + L   + + +    ++  IK+   L+ G+    V +A V  +G   G
Sbjct: 1   MNRRAFTAISLALGLGLAAPAWSEDKPVIDQIKETKVLRVGL-GTFVPWAFVNKDGALVG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD    L++ +  +   ++ +P        +L + Q D++      T  R  ++    
Sbjct: 60  FEVDVATRLAADLGVE---LELVPTAWDAIIPSLVAGQFDVVIGGLTITEERAQTVDFTK 116

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                        +    I+++ Q++ A + + A   +      +F         ++F+ 
Sbjct: 117 PYEHSQTYVVVNANVAPEITTLEQVNAAGVTISARRGSSANPQAFFPQA----TALLFDD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                  +      A            L    P+   IL   +S+S  A A+ +GD    
Sbjct: 173 ENMQIQEFFNGNAKAIFTSTPTPA--LLVERDPALARILEPAVSQSDEAFALRKGDPASQ 230

Query: 239 NIVSWTHYA 247
              +    A
Sbjct: 231 AAFNDWIDA 239


>gi|327486003|gb|AEA80409.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae LMA3894-4]
          Length = 278

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 77/239 (32%), Gaps = 12/239 (5%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                + +++   L  IK+RG L+ G++T  V +A     GD  GF++D  + L++    
Sbjct: 24  AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGDLIGFEIDVAKRLAADSGW 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +++++P        AL +K+ D++      T  R  S  + F       G      K
Sbjct: 83  ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           K               V+             +    K   + F+   +           A
Sbjct: 138 KLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                       + +      +   + +SK   A A+  G+ +         +    AE
Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEED-----KKAFFDQWIAE 250


>gi|325928908|ref|ZP_08190070.1| cyclohexadienyl dehydratase [Xanthomonas perforans 91-118]
 gi|325540704|gb|EGD12284.1| cyclohexadienyl dehydratase [Xanthomonas perforans 91-118]
          Length = 319

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 81/255 (31%), Gaps = 8/255 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   L+       +T AS L  + + G L+         ++ ++ +G ++G D
Sbjct: 63  MRHRICLAF--LLSCGTAHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRGDGQFEGSD 120

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  ++L++++    ++++ +  +  +    L + + DI       TL R+     +   
Sbjct: 121 IDLVQSLAASL---DARVRLVRTSWPQLMPDLLADRCDIAVGGISVTLQRQRQASFSAVL 177

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                        +    S+ QL+   + +            +      +    +F    
Sbjct: 178 NVDGKIPLVRCADQARYRSLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQATLRLFADNT 235

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I     AHR D    D S     +              +      A  + + D  W   
Sbjct: 236 TIFQELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAY 294

Query: 241 VSWTHYAMVTAEELG 255
           V    +    + +  
Sbjct: 295 VDQWLHLSKASGDYQ 309


>gi|257870152|ref|ZP_05649805.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
 gi|257804316|gb|EEV33138.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
          Length = 280

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 71/247 (28%), Gaps = 7/247 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                +    +++    S +   + L  +++   L    +  L   +    +    G+DV
Sbjct: 10  KNIVVLGAFVMLLGACGSKAKEDNSLSRVQESKELTVATSGTLFPSSYYNDDNQLVGYDV 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + ++  +      IQ+   N   +  +L   + D  + +   +  R     L+    
Sbjct: 70  DVAKEVAKRMG---VSIQFKEYNVDGQVASLTRGEADFAANDFGLSGDRGDKFRLSEPIK 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             FD          GI+S+  L+G     +  T+      +Y      K         ++
Sbjct: 127 YSFDSMIVRKSDDSGIASLDDLAGKKAAGEPNTSYMKLAEEY----GAKLVTYDNATNDQ 182

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R D    D                 ++     + +       + +   ++ V
Sbjct: 183 YLTDVANGRTDVILNDYYLQKMSVAALPDIPVKILEDVYFNPNETGFLFAKDNQALHDEV 242

Query: 242 SWTHYAM 248
                 M
Sbjct: 243 DRVLKEM 249


>gi|222087818|ref|YP_002546356.1| nopaline binding protein of ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221725266|gb|ACM28422.1| nopaline binding protein of ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 282

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 42/275 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  FV  L L+ +     + N         R  +          +  + ANG+  G+D
Sbjct: 1   MNKSAFVFSLALLAISQLGANAN--------DRKTITIATEGASPPWDAIDANGELVGYD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I     + +++  +      AL   + D +      T  R+ S+   F  
Sbjct: 53  IDVGKELCQRI---KIECKFVAQDWDGIIPALTVGKFDAIMSGMAITEKRKKSIA--FSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                     + K   + +                          L+G ++ V   + +E
Sbjct: 108 PYAGGFNQLAIRKDLHLPATDTKAKINLTTIGSEQQAILDQLRATLTGKTLGVLRSSNSE 167

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L D F           ++  + +     A R D    D         + D  +     
Sbjct: 168 AVLNDLF---GKVATVRSYDTQDNLHLDLTAGRIDGGLADYFTWKTFLGSKDGETAAFYG 224

Query: 218 PDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           P++        +   I + D +  +  +      +
Sbjct: 225 PELSGGLWGPGVGIGIRKADADLVDAFNKAIKDSI 259


>gi|314939959|ref|ZP_07847159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314942568|ref|ZP_07849402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314947466|ref|ZP_07850881.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314952490|ref|ZP_07855491.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314992413|ref|ZP_07857839.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996253|ref|ZP_07861312.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313589575|gb|EFR68420.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593048|gb|EFR71893.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313595396|gb|EFR74241.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313598672|gb|EFR77517.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640793|gb|EFS05373.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313646016|gb|EFS10596.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 487

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 82/243 (33%), Gaps = 13/243 (5%)

Query: 16  FFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+ S+ +  +  I+ K+       ++    F    A G+++G DV     ++      
Sbjct: 18  TTTAESSTSETMQKIEPKKDVYVIASDSAFAPFEFQNAKGEYEGIDVKLMENIAK---LQ 74

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I+           AL+S Q D +      T  R+      F    +  G    + K 
Sbjct: 75  GFNIRMDYRGFSAALQALESGQADGMIAGMTVTDERKK--SYDFSDSYFDSGIQLAVKKG 132

Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I S   L G ++  + GT +   L+D+   +        F+  +++    +    DA
Sbjct: 133 DTSIKSYEDLKGKTVGAKVGTESAEFLSDHESEYGYS--IKYFDAADQLYDGLKVGAIDA 190

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D   +    +   +  E  I  +   K   A A+ +  + E  N+ +     +    
Sbjct: 191 MMDDYPVI-GYAIKQGQELETPIKKESGGK--YAFAVKKGQNPELLNMFNEGLKELKRTG 247

Query: 253 ELG 255
           E  
Sbjct: 248 EYD 250


>gi|254706843|ref|ZP_05168671.1| extracellular solute-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261314308|ref|ZP_05953505.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261303334|gb|EEY06831.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
          Length = 146

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 5/137 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGI 137
             Y    G    K   I
Sbjct: 116 KYYNTPPGIAAPKDTDI 132


>gi|315641051|ref|ZP_07896134.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483220|gb|EFU73733.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 488

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 85/280 (30%), Gaps = 25/280 (8%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAE- 49
           M K            +L L  +    F            IK  G L  G++     +   
Sbjct: 1   MRKKQIKWVLAIMACLLTLGTVMPVGFVKAEETDAEYQKIKDAGELVVGLSADYAPYEFH 60

Query: 50  --VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             V       GFDV   + ++  +      ++   L       AL++ +ID++      T
Sbjct: 61  AEVNGTDTIVGFDVSIAQKIADDLGVK---LKIEELGFDALLGALKTGKIDLIISGMTPT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFK 165
             R     + F        Q  ++ K       +V+   G S+  Q  TT E  +     
Sbjct: 118 EER--LKEVDFSDPYLTSSQKVVIRKADADKYKTVNDFKGQSVGAQKQTTQEELVKTEL- 174

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
              +    +  ++V ++       + +    +     A    +   +   +  +  +K  
Sbjct: 175 ---VGATAVSLQKVPDLIMNLTNKKVEGVVLEQPVAEAYVDRDSSLTLADVTFENGTKQ- 230

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            A A+ +        ++ +   +     +   Q   N++ 
Sbjct: 231 TAIAMPKNSPVLKEKINASIKEIDDKGLMKTYQAEANKLM 270


>gi|218680403|ref|ZP_03528300.1| putative periplasmic binding ABC transporter protein [Rhizobium
           etli CIAT 894]
          Length = 259

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 81/221 (36%), Gaps = 17/221 (7%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           ++ G        FA   A+G+W+G++VDF +A+ +    D        L       AL S
Sbjct: 27  VRVGFAAEPYPPFASPDASGNWEGWEVDFMKAMCAEAKLD---CVITALAYDGLIPALTS 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
            +ID++  +   T  R     + F    Y      I  K      +   L+G ++ VQA 
Sbjct: 84  NKIDMIVASMSITAAR--QQTIDFSDKYYNTLPAIIGPKDVKFEPTPEGLAGKTLGVQAA 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  +     YF           ++  +E      A R DA   D S   +  +  ++ + 
Sbjct: 142 SIHQAYADKYFAPAG--ATIKEYQTQDEAINDLAAGRVDAVQAD-SIPLSEHVKTEQGAC 198

Query: 214 HVILPDIISKSP------LAPAIIQGDTEWYNIVSWTHYAM 248
              L   +   P      +   + +GDT   + V+    A+
Sbjct: 199 -CELKGTVKADPAILGQGVGVGLRKGDTALKDKVNAAIGAI 238


>gi|207722494|ref|YP_002252930.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
 gi|206587675|emb|CAQ18257.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia
           solanacearum MolK2]
          Length = 283

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 79/252 (31%), Gaps = 16/252 (6%)

Query: 2   YKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            ++F    L         T+       + DIKKRG L  G       F  V  NG   GF
Sbjct: 6   RRNFLRLALGTSATFALPTTAFAEGGSIADIKKRGKLVVGTEAAYEPFEFV-ENGQVVGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    ++  +  +  ++    L  +     L S + D ++ +   T  R       F 
Sbjct: 65  GRDILVLMADKLGVELEQMN---LPFQGLLPGLLSHKFDFVATSVSITPERAKRFA--FS 119

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-----HP 173
                     +       I+    L+G  +  Q G++++     + K    +        
Sbjct: 120 QPVGVVRPVLMARVDDTSITRDLDLAGKVLGTQMGSSSQPAAEQFEKTLKEQRGKGYADT 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +F+   ++  A      D     I +  A      +P    I+ ++     LA      
Sbjct: 180 KLFQAYPDVAIALSNKTVD--VAFIPSNVAAIQMRKQPGAFKIVGEVGQPRLLAWVANPQ 237

Query: 234 DTEWYNIVSWTH 245
           D E    ++ T 
Sbjct: 238 DLEIRKFINDTL 249


>gi|238786385|ref|ZP_04630315.1| Arginine-binding periplasmic protein 1 [Yersinia bercovieri ATCC
           43970]
 gi|238712712|gb|EEQ04794.1| Arginine-binding periplasmic protein 1 [Yersinia bercovieri ATCC
           43970]
          Length = 243

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +    ++  +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEM---QAECTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTKPYYDNSALFIAEKG-KVADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L       + +   + ++  +      +  R DA  GD + +      ND+    
Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQNDQLAAV 191

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       + L  A+ Q ++E    +    
Sbjct: 192 GDKVTDADYFGTGLGIAVRQTNSELLGKLDAAL 224


>gi|107024477|ref|YP_622804.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116688144|ref|YP_833767.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|206558455|ref|YP_002229215.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|105894666|gb|ABF77831.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116646233|gb|ABK06874.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|198034492|emb|CAR50357.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 262

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 20/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +   +     S +  A           L+ G+      F     NGD +GFD
Sbjct: 1   MKHTATLKLAFALACAIGSGAALADAP-------TLRFGLEAQYPPFESKAPNGDLQGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+           +++  +      AL+ ++ D ++   + T  R     + F  
Sbjct: 54  IDVGNAVCQ---TAKLSCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDFTT 108

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I Y      I     G + +   L G  + V   +  E     +++   +    + ++  
Sbjct: 109 IIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETFAKAHWEPAGVA--IVAYQDQ 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            +  A   A R DA      +     L+         +   +         +A  + +GD
Sbjct: 167 NQAYADLVAGRLDATLVLAPSGQRGFLSRPDGKGFSFVGQPVHDDKILGSGIAFGLRKGD 226

Query: 235 TEWYNIVSWTH 245
                 +    
Sbjct: 227 DALKAKLDAAI 237


>gi|311064464|ref|YP_003971189.1| solute-binding protein of ABC transporter system [Bifidobacterium
           bifidum PRL2010]
 gi|310866783|gb|ADP36152.1| Predicted solute binding protein of ABC transporter system
           [Bifidobacterium bifidum PRL2010]
          Length = 309

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51
           M +  F + L  ++    S +   S        G          +  G+ +   G     
Sbjct: 15  MRR--FSAALAAVLWTAGSLTACGSSSSRNDANGVSIRQPEGPTVSIGVASDQPGLGVW- 71

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG + GFDVD  R ++ A+     +I + P+  + R   L+S Q+D++  +   T   E
Sbjct: 72  HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 131

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               +          Q  ++       I+ +  ++G   CV AG+     + D  ++   
Sbjct: 132 S--AVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAP 185

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K      +   +   +      DA     + L  L           ++     +     A
Sbjct: 186 KASIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGNGYV-QVVGAPFGEERYGIA 244

Query: 230 IIQGDTEWYNIVSWTHYAMV 249
           +  G+T+  + +      M+
Sbjct: 245 VKHGNTQLADSIGDILSDMI 264


>gi|257467873|ref|ZP_05631969.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 249

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 81/245 (33%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++ L  L F +                L  G N     +  ++ +    GFD
Sbjct: 1   MKKLIILFMMILSTLSFAA--------------KKLYVGTNAEFKPYEYLEGD-KITGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF  A+   I  +   + ++ +       ALQ K++D +      T  R+ ++  +   
Sbjct: 46  IDFMDAIGKEIGYE---VHWVNMGFDGLLPALQMKKVDAVIAGMSQTPERQKAVDFSMPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +        I+++   I    +L    + VQ GT  E           +   P ++    
Sbjct: 103 MFTKSEHYVIVNENSPIVKKEELKDKKVGVQIGTIQEEFTIA------LDGIPQIYNAWT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +  +  A      +  A         +  I+ D    + +A    +G+T+    
Sbjct: 157 GALMDLQQDKISAVIIADVSGNAYLENMKGLKKVDIVIDSQPGASIA--FRKGETDLVKA 214

Query: 241 VSWTH 245
           V+   
Sbjct: 215 VNEAI 219


>gi|163745603|ref|ZP_02152963.1| hypothetical protein OIHEL45_08430 [Oceanibulbus indolifex HEL-45]
 gi|161382421|gb|EDQ06830.1| hypothetical protein OIHEL45_08430 [Oceanibulbus indolifex HEL-45]
          Length = 269

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 85/250 (34%), Gaps = 20/250 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K+  V +        +  S  A           LK G       +      G+++GF+VD
Sbjct: 5   KNLIVGLTVAAFTALSGVSAMAQ--------DVLKIGSYPANPPWEFKNEAGEFEGFEVD 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +++ +        Y   + +  F+A  S ++D +  +   T  R      +F    
Sbjct: 57  IINEVAARLGKTTEISGY---DFRALFVATASGRVDAVISSLTITDER--LEAQSFTQPY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +    G       GI+ +  L G  I   A +  E  L +         +   ++    +
Sbjct: 112 FSGALGVGTKTDAGIADLDGLEGKRIGSIATSFPENWLKEREAELGYASYS-SYDTTANM 170

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWYNI 240
               R+ R DA   D   + +L+    +P+     +  +I +    A  + +G +E    
Sbjct: 171 LTDLRSGRIDAAVND---IVSLRYAFAQPTMQGLQVSVEIPTGDKFAIMMPKG-SEHLEA 226

Query: 241 VSWTHYAMVT 250
           V+    +M  
Sbjct: 227 VNDAISSMKE 236


>gi|163816014|ref|ZP_02207384.1| hypothetical protein COPEUT_02194 [Coprococcus eutactus ATCC 27759]
 gi|158448824|gb|EDP25819.1| hypothetical protein COPEUT_02194 [Coprococcus eutactus ATCC 27759]
          Length = 289

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 20/244 (8%)

Query: 7   VSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           V+ + L ++          S + S L  +K +G L  GI T          +G+W GFD 
Sbjct: 34  VAAMGLSLVGCGGSDNGSKSESKSDLEYVKDKGTLVVGI-TDFAPMDYKDESGNWIGFDA 92

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A + ++        ++ ++   + + L  K ID +      T   E++  +A    
Sbjct: 93  DMASAFAESLGVKAE---FVEIDWDNKIMELDGKTIDCVWNGMTLTD--EVTSSMACSDA 147

Query: 122 TYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + Q  I+ K       +V  +   +  V+AG+  E    D  KA  + Y  +  +  
Sbjct: 148 YCNNAQVVIVPKDKADKYQTVDSIKELTFAVEAGSAGE----DQAKALGLNYTAVKAQ-- 201

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      A   DA   D S + A  +      + +     ++         +       
Sbjct: 202 ADALMEVAAGTSDAAIID-SLMAAAMVGEGTGYDKLTYTVGLNSEEYGVGFRKDSDLVAE 260

Query: 240 IVSW 243
           +  +
Sbjct: 261 LNKF 264


>gi|326382646|ref|ZP_08204337.1| amino acid ABC transporter amino acid-binding protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198765|gb|EGD55948.1| amino acid ABC transporter amino acid-binding protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 300

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 73/218 (33%), Gaps = 14/218 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +  +I++ G L+ G N           +G+  GFDVD   A++  +        Y  
Sbjct: 50  AAKLPANIRESGVLRVGTNPPYQPNEFKDRDGNIIGFDVDLMNAVAGVLGLKA---IYSE 106

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +  +   A+Q    D+   +   ++ R+    + F        +     K       + 
Sbjct: 107 SDFDKIIPAMQGGTYDLGMSSFTDSVERQK--EVDFVDYFSAGIK--WAQKVGRGIDPND 162

Query: 143 LSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G  + VQ+ T  +            KA       + FE  +++  A    + DA++ D
Sbjct: 163 ACGLRVGVQSTTVEDTDEIPAKSEACVKAGKDPIVKVKFETQDQVVNAVLLGQVDAFSAD 222

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                          +   +  +   +P    II+G +
Sbjct: 223 SPVTA--YAVKKTDGQLEEVGPLFDAAPYGWPIIKGSS 258


>gi|262403072|ref|ZP_06079632.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
 gi|262350571|gb|EEY99704.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
          Length = 278

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 20/242 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L++       ++
Sbjct: 29  AVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW---QV 84

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136
           +++P        AL +K+ D++      T  R  S  + F       G      KK  +G
Sbjct: 85  EFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASKKLAEG 142

Query: 137 ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            S +   +     I  + G  T     + F         + F+   +           A 
Sbjct: 143 FSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVINGNAHAV 198

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAMV 249
                      + +      +   + +SK   A A+  G+ +        I   T    +
Sbjct: 199 IASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKMAYFDQWIADRTADGWL 257

Query: 250 TA 251
            A
Sbjct: 258 QA 259


>gi|238749808|ref|ZP_04611313.1| Arginine-binding periplasmic protein 1 [Yersinia rohdei ATCC 43380]
 gi|238712463|gb|EEQ04676.1| Arginine-binding periplasmic protein 1 [Yersinia rohdei ATCC 43380]
          Length = 243

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 12/213 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +  D     +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEMQAD---CTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R   +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERLKQVA--FTQPYYDNSALFIAEKG-KLADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212
           T +  L       + +   + ++  +      +  R DA  GD + +      ND+    
Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQNDQLAAV 191

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              +       + L  A+ Q +TE    +    
Sbjct: 192 GDKVTDADYFGTGLGIAVRQNNTELLGKLDAAL 224


>gi|123441813|ref|YP_001005797.1| arginine-binding periplasmic protein 1 precursor [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|332162244|ref|YP_004298821.1| arginine-binding periplasmic protein 1 precursor [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122088774|emb|CAL11580.1| arginine-binding periplasmic protein 1 precursor [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|318606307|emb|CBY27805.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666474|gb|ADZ43118.1| arginine-binding periplasmic protein 1 precursor [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 243

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 79/216 (36%), Gaps = 18/216 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +    ++  +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEM---QAECTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTQPYYENSALFIAEKG-KVADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L       + +   + ++  +      +  R DA  GD + +        + ++ 
Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEW---LKQNNQL 188

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
             + D ++ +         A+ Q +TE    +    
Sbjct: 189 AAVGDKVTDANYFGTGLGIAVRQNNTELQGKLDAAL 224


>gi|23099529|ref|NP_692995.1| amino acid ABC transporter substrate-binding protein
           [Oceanobacillus iheyensis HTE831]
 gi|22777759|dbj|BAC14030.1| amino acid ABC transporter substrate-binding protein
           [Oceanobacillus iheyensis HTE831]
          Length = 268

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 78/262 (29%), Gaps = 23/262 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGFAEVKAN 53
           M K  F+    +  L  ++ S   S          D+ + G L    +     F+ ++ +
Sbjct: 1   MRKLKFLLFTLVAFLLLSACSEEGSNAESETDQPYDLVEDGKLTFAASGEFKPFSYMEGS 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            D  G+D+    A++  +  +P+               +   + DI   +   T  R   
Sbjct: 61  -DMVGYDIAVGEAVAEKLGLEPNP---QRAKFSGIVTGVTEGRYDIAVASHTITEER--L 114

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F    Y+ G          I  V  L G  I V  GTT   T  +         + 
Sbjct: 115 EQVDFSEPYYYSGPVIYTRPDSDIKEVQDLEGKEISVARGTTYLETAQE------YTDNI 168

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +       +  +   DA   D                 V     +  +  A A+ + 
Sbjct: 169 PQVDSDVVALQSLSSGHHDAVITDDVTGITAI----DAGLEVEGRIQLGIAEQAIAVNKE 224

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + E  + V      +  + EL 
Sbjct: 225 NKELRDAVDEVLQELKDSGELA 246


>gi|238788680|ref|ZP_04632472.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia frederiksenii ATCC 33641]
 gi|238723275|gb|EEQ14923.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia frederiksenii ATCC 33641]
          Length = 260

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 13/215 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G +     F    A+G+  GFD+D  + L + I    +K  ++  +      +L++K
Sbjct: 28  IKIGTDPTYAPFESKNASGELVGFDIDIAKELCNRI---DTKCTFVESDFDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+  +   F    Y      I  K   I  ++  L G  + V  G+
Sbjct: 85  KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIATKGSTIEPTLVALKGKRVGVLQGS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E      ++   +    + ++  + I A   + R DA   D  A     L  +    +
Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAGSEGFLKQEVGKGY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244
                 +             + + D E    +   
Sbjct: 201 AFAGPSVKNDQFFGVGTGMGLRKDDVELKAALDKA 235


>gi|291542411|emb|CBL15521.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Ruminococcus bromii L2-63]
          Length = 270

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 11/241 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            +    F    ++A+    I  +G L  G+ T       + A+G   GF+ +F  A+   
Sbjct: 14  AMSASIFVGCGSSATDWDYISNKGELVIGV-TYFEPMNYLDADGKLTGFETEFAEAVCEK 72

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +   P   ++  ++   + + L SK ID +          +    +        + Q  +
Sbjct: 73  MGVTP---KFQKIDWDSKEVELNSKTIDCIWNGLTI--DDDRKSTMDISTPYMENKQVMV 127

Query: 131 MHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
                   I S   L   ++  +  +  E                +  +   +     ++
Sbjct: 128 AKSDVADKIKSADDLKDKTVVAEKKSAGETVAQ--TDEFFSSAKYVSVDAQAKALLEVKS 185

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYA 247
              D    D         +    ++  ++            A+ +   E    ++    A
Sbjct: 186 GTADVAVIDYVMSIGTLKSGSDYADLKVVDGKDFSPEQYGIALRKDSPETLKKLNDAIQA 245

Query: 248 M 248
           +
Sbjct: 246 V 246


>gi|229841299|ref|ZP_04461458.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843402|ref|ZP_04463548.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229689749|gb|EEO81810.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697665|gb|EEO87712.1| ABC transporter, periplasmic arginine-binding protein artI
           precursor [Yersinia pestis biovar Orientalis str. PEXU2]
          Length = 181

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 19/166 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L  + F++ +              L+   +     F  + AN +  GFD
Sbjct: 10  MKKLLLATL--LSGMAFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 57  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
             Y +    I  K    S+ + L G  I ++ GTT +  L D    
Sbjct: 112 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE 156


>gi|154706907|ref|YP_001424932.1| arginine-binding protein [Coxiella burnetii Dugway 5J108-111]
 gi|154356193|gb|ABS77655.1| arginine-binding protein [Coxiella burnetii Dugway 5J108-111]
          Length = 269

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 9/199 (4%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     +K         +  +  +G  +GF  D  +A+   +    +             
Sbjct: 37  VFATDTIKFATEATYPPYVYMDQSGQVEGFGADIVKAVCKQM---QAVCTISNQPWDSLI 93

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASI 148
            +L+  + D L    + T  R+    + F    Y +   FI  K   ++ S   L G  I
Sbjct: 94  PSLKLGKFDALFGGMNITTARQK--EVDFTDPYYTNSVSFIADKNTPLTLSKQGLKGKII 151

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GTT +  L D F           +   E+      + R DA  GD   +      N
Sbjct: 152 GVQGGTTFDSYLQDSF---GNSITIQRYPSEEDALMDLTSGRVDAVVGDTPLIKQWLKQN 208

Query: 209 DRPSEHVILPDIISKSPLA 227
            R    +I   +   +   
Sbjct: 209 GRGEYVLIGKPVNDPNYFG 227


>gi|260771023|ref|ZP_05879951.1| cyclohexadienyl dehydratase [Vibrio furnissii CIP 102972]
 gi|260613912|gb|EEX39103.1| cyclohexadienyl dehydratase [Vibrio furnissii CIP 102972]
          Length = 257

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 76/245 (31%), Gaps = 15/245 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K   +  LCL++      S   S L  +   G L+ G        +        ++GF
Sbjct: 1   MRKRIALLGLCLLV---AVPSYAQSRLQTVLNTGVLRVGTTGDWNPMSIKDPATNRYRGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L++ +      ++Y+  + K     + + + D ++ +    + R    G +  
Sbjct: 58  DIDVTTELANDLG---VTVEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
                        +             ++ V A   T  E  + ++F             
Sbjct: 114 YFYLAFVPVVQKSELSRYQDWQDFDQPNVKVAATLGTVQEKMVKEFFPNAQHIVIEAPAR 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E      A R D           L     +    V +      +P+A  + Q D  W
Sbjct: 174 DYQE----LLAKRADVSVTSNVEAATLVDKFSQ-LAIVPVKAARRPTPIAMLLPQDDQVW 228

Query: 238 YNIVS 242
            N ++
Sbjct: 229 INYIN 233


>gi|254246708|ref|ZP_04940029.1| Extracellular solute-binding protein, family 11 [Burkholderia
           cenocepacia PC184]
 gi|124871484|gb|EAY63200.1| Extracellular solute-binding protein, family 11 [Burkholderia
           cenocepacia PC184]
          Length = 262

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 20/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +   +     S +  A           L+ G+      F     NGD +GFD
Sbjct: 1   MKHTATLKLAFALACAIGSGAALADAP-------TLRFGLEAQYPPFESKAPNGDLQGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+           +++  +      AL+ ++ D ++   + T  R     + F  
Sbjct: 54  IDVGNAVCQ---TAKLSCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDFTT 108

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           I Y      I     G + +   L G  + V   +  E     +++   +    + ++  
Sbjct: 109 IIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETFAKAHWEPAGVA--VVAYQDQ 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            +  A   A R DA      +     L+         +   +         +A  + +GD
Sbjct: 167 NQAYADLVAGRLDATLVLAPSGQRGFLSRPDGKGFSFVGQPVHDDKILGSGIAFGLRKGD 226

Query: 235 TEWYNIVSWTH 245
                 +    
Sbjct: 227 DALKAKLDAAI 237


>gi|301793432|emb|CBW35805.1| ABC transporter, substrate binding protein [Streptococcus
           pneumoniae INV104]
          Length = 276

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 12/253 (4%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G    +  +    N+    F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGQAASKKEIIVATNSSPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVNNISYTKERAEKYLY 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           A  P         +      I S+  + G S  V  GTT+   L DY K H+     + +
Sbjct: 118 A-APTVKDPNVLVVKKDDSSIKSLDDVGGKSTEVVQGTTSAKQLEDYNKQHSDNPTILNY 176

Query: 177 ERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQG 233
            +    +I       + D    D        + N       ++     + P     + +G
Sbjct: 177 TKANLQQIMGHLSDGQFDYKISDK-ITVETVIKNQGLDNLKVIDLPSDQQPYVYPLLAKG 235

Query: 234 DTEWYNIVSWTHY 246
             E    V     
Sbjct: 236 QDELKTFVDKRIQ 248


>gi|325971015|ref|YP_004247206.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy]
 gi|324026253|gb|ADY13012.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp.
           Buddy]
          Length = 260

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 24/265 (9%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     + IL +   F  +     S               N        V   GD  G
Sbjct: 1   MKKLGTLALIILLVGSAFLFAQGQKEST-------KSYVFAANCAWPPLEFVDEKGDVVG 53

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D    ++     +  +I    +  +  F  L +   D ++     T  R+ ++   F
Sbjct: 54  FEIDLVNEIAK---VNNVQITIRNVAWEGIFAGLANGAYDAVASGVSVTEERKATM--DF 108

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVF 176
                   Q  +       +S+ + L+G  + VQ GTT  + L D+ K + + K     +
Sbjct: 109 STPIMIITQAILAPIADTTLSNTASLNGKVVGVQLGTTGHIFLDDFMKQNPSFKATIKAY 168

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP------DIISKSPLAPAI 230
           + +             A   D     A       P+    L       D+    P+A A+
Sbjct: 169 DEIGFAIEDMLNGNLQAVVTDSVI--ASDFVLSNPNYASKLKVAGSASDLGDPEPIAIAM 226

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255
           ++G+ E  ++V+     +  + ++ 
Sbjct: 227 LKGNKEVLDLVNNGLKQIEESGKMA 251


>gi|91781413|ref|YP_556619.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia xenovorans LB400]
 gi|91685367|gb|ABE28567.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 264

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 83/224 (37%), Gaps = 14/224 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NG+ +G D+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKGPNGELQGLDIDVGNAVCAAA---HMTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I  +  G + + + L G  + V   
Sbjct: 87  RKFDAINSAMNATEQR--RQAIDFTTVVYRVPTQLIAKRDSGLLPTTASLKGKRVGVLQS 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++++       + ++   ++     A R DA      A     L+    + 
Sbjct: 145 SIQETFAKAHWESAG--VTVVPYQDQNQVYTDLVAGRLDATLVLAPAGQTGFLSKPNGAG 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +  + + +         +A  I +GDT   + ++    A V A+
Sbjct: 203 YAFVGEPVRDDRILGSGIAYGIRKGDTALRDRLNAAI-AKVQAD 245


>gi|238792436|ref|ZP_04636070.1| Arginine-binding periplasmic protein 1 [Yersinia intermedia ATCC
           29909]
 gi|238728362|gb|EEQ19882.1| Arginine-binding periplasmic protein 1 [Yersinia intermedia ATCC
           29909]
          Length = 243

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 79/216 (36%), Gaps = 18/216 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +    ++  +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEM---QAECTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTKPYYDNSALFIAEKG-KVADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L       + +   + ++  +      +  R DA  GD + +        + ++ 
Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEW---LKQNNQL 188

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
             + D ++ +         A+ Q +TE    +    
Sbjct: 189 AAVGDKVTDADYFGTGLGIAVRQNNTELQGKLDAAL 224


>gi|56964694|ref|YP_176425.1| amino acid ABC transporter substrate-binding protein [Bacillus
           clausii KSM-K16]
 gi|56910937|dbj|BAD65464.1| amino acid ABC transporter substrate-binding protein [Bacillus
           clausii KSM-K16]
          Length = 280

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 85/260 (32%), Gaps = 14/260 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S        I+++G +       L   +    + +  GF+V+  + ++  +  D   + 
Sbjct: 30  ASDENQAWDAIEEKGTIVVATAGTLFPTSYHDDDNELTGFEVELVKEVADLLGVD---VT 86

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGI 137
           +  +  +    AL S ++ + + +   T  R+      F     F     I+      GI
Sbjct: 87  FEEIGVETMTQALNSGRVHLAANSLAITEERQK--NFDFSLPYKFSYGSAIVRADDLSGI 144

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            ++  L G  I + A TTT +  A+ + A  + +  +     +    A    + D    D
Sbjct: 145 ETLEDLDG-KIALGAPTTTYMQKAESYGAEPLFFDNV---TNDVYLRAVETGQGDVILND 200

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY---AMVTAEEL 254
                            V        S  A  + +G+T     V        A  TA EL
Sbjct: 201 FYLQSITVEAMPDIDVVVHPTLFYDPSEQAFMMAKGETRLKEAVDEALEQLLADGTASEL 260

Query: 255 GITQKNINQVSKDTTNPDVQ 274
                N   V+    + + Q
Sbjct: 261 SKQFFNGQDVTTLPDDIEFQ 280


>gi|238854603|ref|ZP_04644936.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus jensenii 269-3]
 gi|260664279|ref|ZP_05865132.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           jensenii SJ-7A-US]
 gi|282933428|ref|ZP_06338807.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1]
 gi|238832788|gb|EEQ25092.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus jensenii 269-3]
 gi|260562165|gb|EEX28134.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           jensenii SJ-7A-US]
 gi|281302442|gb|EFA94665.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1]
          Length = 264

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 88/255 (34%), Gaps = 19/255 (7%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDW 56
           M K    F   +L L+ +   + S   +   D   +  L  G+N  G   F+ +  NG  
Sbjct: 1   MKKIKNIFMTVLLMLLSVGVVACSNQKNAKSDTLTKNTLIVGLNPSGYGPFSHL-ENGKL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF+V+  +AL+  +      I+++P         L +K+ D++  +   T  R+     
Sbjct: 60  TGFEVEMAKALTKKMGYK---IKFVPTKWDSLIAGLGAKKFDVVINDIAVTPERKK--AY 114

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           AF     +     IM      I  ++ + G  +    GT     +  +   +      I 
Sbjct: 115 AFSTPYLYSRSVLIMRSDNSKIKKITDIRGEKVAAATGTANADLVRKFGGEN------IS 168

Query: 176 FERVEEIDAAYRAHR-CDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQG 233
                      R  R   A     S LY  K       +++   D      P+A  + + 
Sbjct: 169 SPDFSTAMELVRQKRVTSAMNSKESFLYFKKTQKVSDLKYLQASDTDIPTQPVAIMLNKD 228

Query: 234 DTEWYNIVSWTHYAM 248
           ++     ++    ++
Sbjct: 229 NSNLQTKINNALKSL 243


>gi|306846381|ref|ZP_07478928.1| extracellular solute-binding protein [Brucella sp. BO1]
 gi|306273166|gb|EFM55066.1| extracellular solute-binding protein [Brucella sp. BO1]
          Length = 273

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 81/259 (31%), Gaps = 22/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  +I    +  F+  +     L  + ++  +    N G      +  N +  GFD
Sbjct: 1   MNKLF--AIASASLFLFSGMAHAGPTLDRVNEKKEMVVATNVGWPPQGFLNDNNELVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +      +++               + D+   +   T  R  +  + F  
Sbjct: 59  IDVANEIGKRLGVK---VRFETPEWPTLTGGHWQGRYDVGVGSVTPTKAR--AQAIDFAG 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-------ADYFKAHNMKYHP 173
           I Y+    +++HK    +SV+ L G  I V+ GT +E  +       A+          P
Sbjct: 114 IYYYSPYVYVVHKDSKAASVADLKGKVIGVETGTASEDFINHRLEIDAENMPPIKYDLEP 173

Query: 174 IVFERVEEI---DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                  +        R     R DA         AL          ++      +SP  
Sbjct: 174 GEVRTFPDSMMPFDDLRLGDGVRLDAIVT--PEQTALNAIKSGYPVRILSGSYPFRSPAV 231

Query: 228 PAIIQGDTEWYNIVSWTHY 246
               +GD EW   +     
Sbjct: 232 IIAEKGDPEWTAKIGEIIK 250


>gi|257877475|ref|ZP_05657128.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC20]
 gi|257811641|gb|EEV40461.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC20]
          Length = 283

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 8/241 (3%)

Query: 6   FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F+ +   ++L   S  T     L  +++   L    +  L   +      +  G+DVD  
Sbjct: 15  FLGLFAGVLLSACSKPTEEDTSLSKVEEAKTLVVATSGTLYPSSYYNDENELVGYDVDVA 74

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +  +   I +   N   +  +L   + D  + +   T  R     L+      F
Sbjct: 75  KEVAKRLGVE---ITFKEYNVDGQVSSLTRGEADFAANDFGLTDERAEKFSLSTPIKYSF 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D          GI+S+  L G         T+ + LA+ + A  + Y        ++   
Sbjct: 132 DSMIVRKSDDSGIASLEDLDGKK-AAGEPNTSYMRLAESYGAELVTYD---NATNDQYLT 187

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                R D    D                 ++     + +      ++        V   
Sbjct: 188 DVANGRTDVILNDYYLQKMAVAALPDIPVKILEDVYFNPNETGFLFVKDHQALQEKVDAV 247

Query: 245 H 245
            
Sbjct: 248 L 248


>gi|307708021|ref|ZP_07644490.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus mitis NCTC 12261]
 gi|307615911|gb|EFN95115.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus mitis NCTC 12261]
          Length = 276

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 80/254 (31%), Gaps = 14/254 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAASKKEIIVVTNATPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVSNISYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +   T  +    ++ K    I S   + G S  V  GTT+   L DY K H+     + 
Sbjct: 116 LYAAPTAKNPNVLVVKKDDSSIKSFDDIGGKSTEVVQGTTSAKQLEDYNKQHSDNPTVLN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       R D    D        + +       ++     + P     + +
Sbjct: 176 YVKGDFQQIMVRLSDGRFDYKIFDK-IGVETVIKDQGLDNLKVIELPSDQQPYVYPLLAK 234

Query: 233 GDTEWYNIVSWTHY 246
           G  E    V     
Sbjct: 235 GQDELKTFVDKRIQ 248


>gi|220913574|ref|YP_002488883.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
 gi|219860452|gb|ACL40794.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
          Length = 266

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 77/242 (31%), Gaps = 15/242 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F V  L L     +S    +     +   G L    +     F     +G   GFD+D  
Sbjct: 19  FAVGALTLTACGGSSTPAASEGGIQLINAGKLTVCSDVPYEPFEFQ-KDGKTVGFDIDIA 77

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++  +  + + +      A E   AL    +     +   T  R+  +   F      
Sbjct: 78  NEVAKDLKAELNIVD-SSFEAIETGTALTGCDVS--ISSVSITDTRKQVM--DFSDPYMD 132

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D    +  +  G+ ++    G  + VQ  TT      +             FE    +  
Sbjct: 133 DDLTLVAKEGSGVENIDSAKGKKVGVQQATTGAKYAQE------KGIEAQQFEDSGLLVQ 186

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A  A   DA  G+ S    L       ++   + D  +   L  AI +G+T   + V+ T
Sbjct: 187 ALEAGTVDAALGNQSV---LGYAIKDNTQFTRVEDYATGEKLGIAIKKGNTAMLDQVNST 243

Query: 245 HY 246
             
Sbjct: 244 LK 245


>gi|322834773|ref|YP_004214800.1| Arogenate dehydratase [Rahnella sp. Y9602]
 gi|321169974|gb|ADW75673.1| Arogenate dehydratase [Rahnella sp. Y9602]
          Length = 259

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 11/257 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F+  +L  ++         +S L  + ++G L          +  +K NG+++G D
Sbjct: 1   MKKVFYSLVLLSVLPGLAKAEPASSRLERVLQKGSLNVCTTGDYKPYTFLKENGEYEGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +    +L++++     K+ ++P+  K     + +   DI       TL R+     A   
Sbjct: 61  IAMAESLAASL---DVKVNWVPVTWKSLPDEMSAGHCDIAMGGISVTLKRQQKAWFANVL 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178
                         +   +V QL+ AS+ +      T E  +  +          +    
Sbjct: 118 DQDGKIPLVRCENVRQYQTVEQLNRASVRLIEPAGGTNEAFVHSHLPKG-----TLTLSD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I       + D    D S     +    +         +      A  + + D  W 
Sbjct: 173 NVTIFQKLVDKKADVMITDASEALFQQKHYPKLCAVNPKKPLQYGE-KAYMLPRDDVSWK 231

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +      E  
Sbjct: 232 MYVDQWLHLSKATGEYQ 248


>gi|256845094|ref|ZP_05550552.1| amino acid-binding protein [Fusobacterium sp. 3_1_36A2]
 gi|256718653|gb|EEU32208.1| amino acid-binding protein [Fusobacterium sp. 3_1_36A2]
          Length = 243

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 85/259 (32%), Gaps = 28/259 (10%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     +  L  +++  + F+          K   +  G N   + F  +       G
Sbjct: 1   MKKFVKLMLMFLLSVVISISVFA----------KNNVVYVGTNAEFMPFEYLD-KNKIIG 49

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+S        + +   +       ALQ+K+ID++      T  R+    +AF
Sbjct: 50  FDIDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKIDMVIAGMSATPERQK--AVAF 104

Query: 119 RPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               +   Q  I    K K + S   LSG  + V  G T +  +++             F
Sbjct: 105 SKPYFKAKQVVITTPEKAKSLKSFKDLSGKKVGVMLGFTGDTVVSEI-----KGVKVERF 159

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                   A   ++ DA   D         T     + VI      +   A A  + D E
Sbjct: 160 NAAYAAILALSQNKVDAVVLDSEPAKKYSGTMK---QLVIANIPAEEENYAIAFRKNDKE 216

Query: 237 WYNIVSWTHYAMVTAEELG 255
             N ++     + +  E  
Sbjct: 217 LINKINAALDKIKSNGEYD 235


>gi|241895264|ref|ZP_04782560.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871570|gb|EER75321.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 493

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/265 (11%), Positives = 74/265 (27%), Gaps = 25/265 (9%)

Query: 1   MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K   + +   +++            +       L  IKK G L  G +     +    
Sbjct: 5   MKKLIMMVMAFGLMISSGMGILDVHTINADQTDPTLARIKKSGKLVVGTSADYAPYEFHT 64

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    GFD+D  R +   +           ++      A+++ ++DI+      T 
Sbjct: 65  TENGQDKIVGFDMDVAREIGKQLGVKTE---IQEMSFDALLGAVKTGKVDIVVAGMTETP 121

Query: 109 LREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R  +  + F    + D    +  K+     +++ Q+  A +  Q  +  +    +    
Sbjct: 122 ER--AQEVNFSKPYFVDKNVVLTLKQNKNKWTTLKQIRHAKLAAQVSSKQDDLAHEI--- 176

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  +  +++ +        + D      S      L                 +  
Sbjct: 177 --SNKQVVSLKKITDEVTQLTQKKVDGVV-VASTTAKSYLEQSNQFAVSPAKLPGITNGS 233

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTA 251
           +  + +  T     V+      +  
Sbjct: 234 SVVMNKNATVLQAKVNKILDDHIIG 258


>gi|227544923|ref|ZP_03974972.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300910049|ref|ZP_07127509.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|227185090|gb|EEI65161.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300892697|gb|EFK86057.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 503

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 90/274 (32%), Gaps = 38/274 (13%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNA---------------------SILGDIKKRGFLK 37
           M   K   + ++    +  T  +  A                       +  IK++G L 
Sbjct: 1   MKGFKHLLLLMVIAFPILCTPITALAANESSSTSSSSTNNPSQVASNDSVQKIKQKGTLV 60

Query: 38  CGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            G++     +           + GF+V   +  +  +      +    ++     +AL++
Sbjct: 61  VGMSADYPPYEFTTKENGKTKYVGFEVSLAKQFAKDLGVK---LVIKNMDFDSLLVALET 117

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQA 152
            +ID +    + T  R+    + F    Y     F+++K  K  + +V   +G ++  Q 
Sbjct: 118 GKIDAIISGMNVTAERKK--SVDFSNTYYSGDSYFLINKGDKDKLVNVKSFNGKNVGAQN 175

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     ++      N K       ++  +    ++H+ D    D +   A    N    
Sbjct: 176 GTLQSTLISKEMPKANGKG----LAKLSSLVIGLQSHKYDGILMDAATAKAYAANNSNLY 231

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +   +A A  +GDT   N  + T  
Sbjct: 232 AFNS-KLPNTAGGIAMAFPKGDTSLVNAANQTIK 264


>gi|183602517|ref|ZP_02963882.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683561|ref|YP_002469944.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190591|ref|YP_002967985.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241195997|ref|YP_002969552.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183218158|gb|EDT88804.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621211|gb|ACL29368.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248983|gb|ACS45923.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|240250551|gb|ACS47490.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|295793578|gb|ADG33113.1| ABC transporter solute-binding protein [Bifidobacterium animalis
           subsp. lactis V9]
          Length = 309

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 66/229 (28%), Gaps = 13/229 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +   +KK G L  G +T       +  +G    G+DVD  +A++  +  +P      
Sbjct: 58  AALVPDYVKKDGKLTVGTDTTYAPAEFIGEDGKTAVGYDVDLTKAIAKVMGLEPETAV-- 115

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                    ++ S + DI   +   T  R     + F                       
Sbjct: 116 -SEFDMIIPSIGS-KYDIGISSFTVTPER--QEAVDFVTYYKAGSTWVTQKGNPDKVDTK 171

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGD 197
            L G  + VQ GTT E  L    +              F +  ++  A    +  A    
Sbjct: 172 DLCGVKVAVQTGTTQEEELNKMNEQCKADGKKAIELQTFAKQTDVTTAVVNGKA-AVFYA 230

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            S +    +     +   +  D          + +GD +    V     
Sbjct: 231 DSPVAGYAIEQTDGALAPLGADEGVTEE-GIIVKKGDKQMDEAVQKAVQ 278


>gi|153940204|ref|YP_001390763.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum F str. Langeland]
 gi|170756070|ref|YP_001781054.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum B1 str. Okra]
 gi|152936100|gb|ABS41598.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum F str. Langeland]
 gi|169121282|gb|ACA45118.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum B1 str. Okra]
 gi|295318835|gb|ADF99212.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum F str. 230613]
          Length = 272

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 72/202 (35%), Gaps = 16/202 (7%)

Query: 1   MYKD----FFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K       VS L +I L        + ST     G+ K    +  G +     +   +
Sbjct: 1   MKKKKLSLILVSALAVITLLAGCGKEKATSTEGQNTGNSKSEKKIIVGTSPDYYPWCYTE 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           A G  +GF++D    +      D   I++        F  L + QID ++     T  R 
Sbjct: 61  A-GKLQGFEIDVWNEIGKKAGYD---IEFKQSKFSGLFGMLDAGQIDTVAHQISTTEERR 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F     + G  F+++K K I S+  L G  +    G   E TL    +   +  
Sbjct: 117 K--KYDFTETYAYSGYSFVVNKDKDIKSLEDLKGKKVGCTLGGNGEKTLKKLNEEKGLNI 174

Query: 172 HPIVFERVEEIDAAYRAHRCDA 193
             + +++   ++      R DA
Sbjct: 175 KVLTYDQTP-MEKDVEIGRLDA 195


>gi|311106551|ref|YP_003979404.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans
           A8]
 gi|310761240|gb|ADP16689.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans
           A8]
          Length = 250

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 78/236 (33%), Gaps = 17/236 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L  + +     ++ A       +   L    +T  V F   + N  + GFD
Sbjct: 1   MIKRKVAAALVGLSVAMFGAASGAQA-----QGKELVVATDTAFVPFEFKQGN-TYVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +     K +  P++       LQ+K ID            +    + F  
Sbjct: 55  VDLWAAIAKEL---NLKYKLQPMDFAGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 109

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +  K   I     L+G ++ V+ GT T     D+ KA        +F  +
Sbjct: 110 PYYESGLAILVGEKNTDIKDAKSLAGKTVAVKTGTATV----DFLKAQVPDAKLKLFPNI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +         R DA   D   +     T  +     ++  + S      A  +G  
Sbjct: 166 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGSVKSGDFYGIAFPKGSD 220


>gi|310287551|ref|YP_003938809.1| solute binding protein of ABC transporter system [Bifidobacterium
           bifidum S17]
 gi|309251487|gb|ADO53235.1| solute binding protein of ABC transporter system [Bifidobacterium
           bifidum S17]
          Length = 304

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51
           M +  F + L  ++    S +   S        G          +  G+ +   G     
Sbjct: 15  MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLGVW- 71

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG + GFDVD  R ++ A+     +I + P+  + R   L+S Q+D++  +   T   E
Sbjct: 72  HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 131

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               +          Q  ++       I+ +  ++G   CV AG+     + D  ++   
Sbjct: 132 S--AVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAP 185

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           +      +   +   +      DA     + L  L           ++     +     A
Sbjct: 186 EASIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGNGYV-QVVGAPFGEERYGIA 244

Query: 230 IIQGDTEWYNIVSWTHYAMV 249
           +  G+T+  + +      M+
Sbjct: 245 VKHGNTQLADSIGDILSDMI 264


>gi|187919548|ref|YP_001888579.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187717986|gb|ACD19209.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 275

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 10/230 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L +   +  +     L  +KK G L  G       F  +  NG   GF+ D    + 
Sbjct: 11  LVMLALCAASVTAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEVG 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++++ L        L++ + D++      T  R       +          
Sbjct: 70  KEMGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPVADATDA 124

Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +       +   S ++G ++    G+     L  Y            +    +  A   
Sbjct: 125 LLKRANDSSVKQSSDIAGKTVGAGKGSAQLDQLKAYVATLPKPPEIREYVDNNQAYADLA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
           A R  A    ++ +    +   RP    ++          A  + +    
Sbjct: 185 AGRIAAVANSMTNIA--YVAKQRPETFAVVQPPFGAKVYFAYCLRKDADS 232


>gi|116496267|ref|YP_808001.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|116106417|gb|ABJ71559.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 484

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 93/309 (30%), Gaps = 21/309 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + + + +L  + L   +     S+      +     G +     F     +  + G D
Sbjct: 1   MKRKWLLGLLIALPLMLGALLPGKSVAA---AQKTYTIGTDVTFAPFEFANQDNKYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +  K++  PL       AL++KQID +      T  R          
Sbjct: 58  LDLIKAIAK---TEGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPER--QQKFLMSD 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G    + KK  I S+  L G  + V+ GT +          +      + F+   
Sbjct: 113 PYYKSGVVMAVAKKGTIKSLKDLRGKRVAVKTGTDSADYANSIKDKYGFST--VTFDDSN 170

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A   D   +   +   +      I+     +     A  + +      
Sbjct: 171 NMYQDVITGNSAACFEDQPVM---QYGINNGMALKIIGKPAREGSYGFAASKNNRALITK 227

Query: 241 VSWTH--------YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            +           Y  +    LG       + +        + F G+ K++      GL 
Sbjct: 228 FNAGLKKLRANGQYDKIIERYLGNGSAKSQKTAAGNAQTTDRSFFGLLKANWGTLMSGLE 287

Query: 293 KDWTYRIIR 301
           +     ++ 
Sbjct: 288 ETMVLTVVA 296


>gi|116333810|ref|YP_795337.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus brevis ATCC 367]
 gi|116099157|gb|ABJ64306.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus brevis ATCC 367]
          Length = 492

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 77/222 (34%), Gaps = 22/222 (9%)

Query: 1   MYKDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49
           M K   + +  L+ + F        T+ +   S L  ++K+G L  G +     +     
Sbjct: 1   MKKHVILVLALLLTMVFGMSTLTTSTAHAATDSSLTKLQKKGTLVMGTSPDYPPYEFQAT 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V       G DV     ++  +      +    ++     +ALQ+ ++D++    + T  
Sbjct: 61  VHGKTKIVGMDVAVGEKIAKDLGVK---LVVKSMSFDSLLVALQTGKVDMVISGMNPTAA 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQ-LSGASICVQAGTTTELTLADYFKAH 167
           R+    + F    Y  G   +++K    I        G +I  Q G+T    + +  K  
Sbjct: 118 RKK--SVDFTHTYYQGGYSIVINKNDRGIYKNKDSFVGKTIGAQTGST----MYNESKKQ 171

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                      V ++  A ++H+      +  +  A    N 
Sbjct: 172 TSGTTVKGMTSVSDLILALQSHKIQGVAMEKPSAQAYVANNK 213


>gi|206563061|ref|YP_002233824.1| glutamine ABC transporter periplasmic protein [Burkholderia
           cenocepacia J2315]
 gi|198039101|emb|CAR55064.1| periplasmic glutamine-binding protein [Burkholderia cenocepacia
           J2315]
          Length = 250

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 17/219 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +   +A           L  G +T  + F   + +  + GFD+D    ++        
Sbjct: 16  LGASLAHADT-------KTLVVGTDTSFMPFEFKQGD-KYVGFDLDLWAEIAKDQGWKY- 66

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
                P++      ALQ++ ID+          R+ ++  +  P         +      
Sbjct: 67  --TIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDFS-APYYDSGLAAMVQAGNTS 123

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+  L+G  I  + GT T     D+ KAH        F  +++   A  A R DA   
Sbjct: 124 IKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEVRQFPNIDQAYLALEAGRVDA-AM 178

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +      + N+   +  +    +S         +G  
Sbjct: 179 HDTPNVLFFVNNEGKGKVQVAGQPVSGDKYGIGFPKGSP 217


>gi|89074703|ref|ZP_01161161.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Photobacterium sp. SKA34]
 gi|89049467|gb|EAR55028.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Photobacterium sp. SKA34]
          Length = 251

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++   +L  ++ S  A           +K G++     F  V +N   +GF+
Sbjct: 1   MKNWIKPAVVATTLLACSTTSVMAET--------TVKVGMSGRYFPFTFV-SNDKLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +      +   ++++  +    F  L++ +ID +S     T  R+      F  
Sbjct: 52  VDLWHEIGKR---NDYNVEFVTASFSGLFGQLETGRIDTISNQITITPERKA--KFLFSQ 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG   ++ K    I S + L+  ++ V  G+  E  L D   A   + +   ++  
Sbjct: 107 PYVIDGAQLVVRKGNNTIHSTADLNNKTVGVNLGSNYEQLLRDLPNAK--QINIKTYDSG 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E D A    R DA+  D  +  A+      P +    P    ++               
Sbjct: 165 IEQDVAL--GRTDAFVMDRLSSVAIIKDKPLPLQLAGQPFATIENAWPFLNTAHGKLLQQ 222

Query: 240 IVSWTHYAM 248
            V+ T  AM
Sbjct: 223 QVNTTLAAM 231


>gi|90581125|ref|ZP_01236924.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Vibrio angustum S14]
 gi|90437646|gb|EAS62838.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Vibrio angustum S14]
          Length = 251

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 90/249 (36%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++   +L  ++ S  A+          +K G++     F  V +N   +GF+
Sbjct: 1   MKNWIKPAVVATTLLACSTTSVMAAT--------TVKVGMSGRYFPFTFV-SNDKLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +      +  K++++  +    F  L++ +ID +S     T  R+      F  
Sbjct: 52  VDLWHEIGKR---NDYKVEFVTASFSGLFGQLETGRIDTISNQITITPERQA--KFLFSQ 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG   ++ K    I S + L+  ++ V  G+  E  L D   A   + +   ++  
Sbjct: 107 PYVIDGAQLVVRKGNDTIHSTADLNNKTVGVNLGSNYEQLLRDLPNAK--QINIKTYDSG 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E D A    R DA+  D  +  A+      P +    P    ++               
Sbjct: 165 IEQDVAL--GRTDAFVMDRLSSVAIIKDKPLPLQLAGQPFATIENAWPFLNTSHGKLLQQ 222

Query: 240 IVSWTHYAM 248
            V+    AM
Sbjct: 223 QVNTALAAM 231


>gi|322516335|ref|ZP_08069261.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322125173|gb|EFX96562.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 732

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  + +FF   +  ++          +    +T    F    ++  +KG D
Sbjct: 1   MKKKLLTLFLSAMSVFFVFGAKVSAE--------TISVVSDTAYAPFEFKDSDQIYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKRKNWD---VNQTFPGFDAAVNAVQSGQADSLMAGTTVTDARKKV--FTFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +S   QL G ++ V+ GT  +  L      +        F+  +
Sbjct: 108 TYYDTSIVIYTRSSDKVSDYKQLKGKTVGVKNGTAAQTWLDKNASKYGF--TVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  +   DA   D   +         
Sbjct: 166 LMNNSLDSGSVDAAMDDTPVVKYAIGQGKD 195



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 71/219 (32%), Gaps = 11/219 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +      +++    F     +G + G DVD   A +    +    ++           A
Sbjct: 274 AKETYTISMDSSFAPFEYQNGSGKYVGIDVDIINATAK---NQGFNVKLTNPGFDASLNA 330

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS Q D +      T  R+      F    Y       + K   I S   L G ++  +
Sbjct: 331 VQSSQADAVLAGMTITDARK--QIFDFSDSYYTSNIRLAVAKGSKIKSYKDLKGKTVGAK 388

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT++   L D+   +        ++    +  +  +   DA   D      L     + 
Sbjct: 389 NGTSSYSWLEDHAGEYGF--TVRAYDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQG 443

Query: 212 SEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMV 249
                  + I+   +  A+ +G + E   + +    A+V
Sbjct: 444 RNFTTPIEGIATGDVGFAVKKGANPELIEMFNNGLAAIV 482


>gi|295107160|emb|CBL04703.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 271

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 87/269 (32%), Gaps = 25/269 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRG-----------FLKCGINTGLVGF 47
           M        L   +  F   S +   S   D K  G            L    +     F
Sbjct: 6   MVALVATGALAASLALFGCSSGDGQDSGAKDDKAAGNESGYTLVNDGKLTVAASLDFPPF 65

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDW 106
             +  +   +GF+V+    L+  +  + + +             +Q+  + D+       
Sbjct: 66  ENLNGD-TPEGFEVELMGLLAEEMGLEINYLP--STKFDTIVPLIQTGGKADVGVSGITI 122

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  R     + F        Q   + K  G++ V+QL G  +  Q GTT     A+  K 
Sbjct: 123 TDER--LDQVDFTDAVCDVNQSITVLKDSGVTDVAQLEGKKVGAQTGTTGYEWAAENIK- 179

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + F+ +  +  A ++ + DA   D+    A        ++  ++ +I +    
Sbjct: 180 ---DVEMVGFDEMTAVFLALQSGQIDAIAVDLP--VANYYVKTAYTDCQVIKEIPTGEQY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           A A+ +   E    ++    A+    +  
Sbjct: 235 AIAVSKDSPELTKALNTALKAVRENGKYD 263


>gi|165924319|ref|ZP_02220151.1| arginine-binding periplasmic protein 2 [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939008|ref|ZP_02227561.1| arginine-binding periplasmic protein 2 [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|167419707|ref|ZP_02311460.1| arginine-binding periplasmic protein 2 [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167469038|ref|ZP_02333742.1| arginine ABC transporter, periplasmic substrate-binding protein
           ArtJ [Yersinia pestis FV-1]
 gi|165913155|gb|EDR31779.1| arginine-binding periplasmic protein 2 [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923379|gb|EDR40511.1| arginine-binding periplasmic protein 2 [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166962448|gb|EDR58469.1| arginine-binding periplasmic protein 2 [Yersinia pestis biovar
           Orientalis str. MG05-1020]
          Length = 172

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 19/166 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L  + F++ +              L+   +     F  + AN +  GFD
Sbjct: 1   MKKLLLATL--LSGMAFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    +   +          AL+ K+ D +    D T  R   +   F  
Sbjct: 48  MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
             Y +    I  K    S+ + L G  I ++ GTT +  L D    
Sbjct: 103 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE 147


>gi|73748261|ref|YP_307500.1| amino acid ABC transporter, periplasmic aminoacid-binding protein
           [Dehalococcoides sp. CBDB1]
 gi|147669043|ref|YP_001213861.1| extracellular solute-binding protein [Dehalococcoides sp. BAV1]
 gi|73659977|emb|CAI82584.1| amino acid ABC transporter, periplasmic aminoacid-binding protein
           [Dehalococcoides sp. CBDB1]
 gi|146269991|gb|ABQ16983.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Dehalococcoides sp. BAV1]
          Length = 257

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 14/217 (6%)

Query: 36  LKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +    +     F  V       +GFD+D  +A++        ++ +  +        + +
Sbjct: 38  ITVVTDATWAPFEYVNEQTHAIEGFDIDLMKAIAEKA---NLEVTFQNVAWDALLAGMAT 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            Q  +       T+L +      F    +  GQ   + K    I S   L+G  +  Q G
Sbjct: 95  GQYKVAIS--SITILPDRLEKWLFSEPYFNAGQMVCVQKTNTTILSHDDLTGKRVAAQTG 152

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT          A         ++ +          + DA   D     A+   N  P +
Sbjct: 153 TTGFFEAQKIANA-----TVKSYDEIGLAFQDLINGQIDAVICDNP--VAIDYVNANPDK 205

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              +    +      ++ +G TE  + ++    A++ 
Sbjct: 206 LKKVGTAFTDEYYGISVAKGQTEILSRINLGLAAVIA 242


>gi|306826043|ref|ZP_07459379.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431759|gb|EFM34739.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 276

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 81/254 (31%), Gaps = 14/254 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAAGKKEIIVATNASPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L S +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDSDRYQMAVNNISYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H      + 
Sbjct: 116 LYAAPTAKNPNVLVVKKDDSSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHADNPTVLN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I +     + D    D        + N       ++     + P     + +
Sbjct: 176 YTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAK 234

Query: 233 GDTEWYNIVSWTHY 246
           G  E    V     
Sbjct: 235 GQDELKTFVDKRIQ 248


>gi|227833203|ref|YP_002834910.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
 gi|262184189|ref|ZP_06043610.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
 gi|227454219|gb|ACP32972.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
          Length = 293

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 86/276 (31%), Gaps = 29/276 (10%)

Query: 1   MYKD--FFVSILCLIILFFTSF----------STNASILGDIKK--------RGFLKCGI 40
           M K       +  L     +              +   + ++ +         G L  G 
Sbjct: 1   MIKKTAIVGVVGALASATLSGCVTNEEPALPEGWSEPKVDEVPEIAAMYEDADGVLTVGT 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           N     F    ++G   G ++D   A++  +  +   ++    +      A+QS QID+ 
Sbjct: 61  NPPFAPFEFKDSDGSLIGLEMDLANAVAQVLGLEFQPVE---QDFSMILPAVQSGQIDLG 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-T 159
                 T  R       F  I Y   Q   +         S   G ++ VQ  T +E   
Sbjct: 118 GSGFTDTDER--RENFDFVDILYAGIQWAKLTDGPNEVDPSNPCGLTVAVQRTTVSETDD 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L    +A +     + ++  +    A    R DA + D          +D      ++ +
Sbjct: 176 LRPKQEACDGDLTILPYDTSDNAALAVLMGRADALSADSPVSAWAVNRSD--GRMSMVGE 233

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +   +P   A+ + D++    V+     ++      
Sbjct: 234 MFDAAPYGFAVPK-DSDLGPAVAAALQHLIDTGAYA 268


>gi|254519389|ref|ZP_05131445.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226913138|gb|EEH98339.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 482

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 95/283 (33%), Gaps = 26/283 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K      + L IL     + N   L   K+   L   ++     F  +  + + +GFDV
Sbjct: 7   RKVSLFISVLLSILVIVGCTNNKEALNSEKR---LVVAMSGTYYPFTFLNGD-EIEGFDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R + + +  +   I++   +    F  L + + + +S     T  R+     +   +
Sbjct: 63  DVWREIGNRLGYN---IEFTTASFSGLFGLLDTNKANTISNQITITEERKEKYLFSDPYV 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                        K I+S   L G  + V  G+  E  + D  K  N +   + ++  + 
Sbjct: 120 YSGAQIIVQEGNTKSINSFEDLKGKKVGVDLGSNYEQIIRD--KDVNNEVSVVTYQNTDA 177

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R D    D      + +          L   ++  P+ P         +  +
Sbjct: 178 AFTDLLLGRIDGVVIDK-ISAIVTINEKN------LELELAGEPIEPV-----ENAFPFI 225

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283
             +    + AE      K +N + +D T  ++  ++L  D + 
Sbjct: 226 KGSENETLVAE----VNKALNDMKEDGTFAEISNKWLKTDVTG 264


>gi|307262146|ref|ZP_07543797.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306868123|gb|EFM99948.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
          Length = 260

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 78/247 (31%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  +  I L  ++ S     L   I  +G +  G       F    A+G   G+
Sbjct: 1   MLKKLSVIAVSAIALATSAASLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L++ + D+++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   ++    + I   S + G     Q  ++    LA    A       +  + 
Sbjct: 117 AAYSWSGAALVVRNDEQKIKQASDVKGVKTA-QTLSSNYGELARANGA-----DIVPIDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +     +  R DA   D  AL      N +    ++               +G+ E  
Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDA-GFIANKGNQEAL 229

Query: 239 NIVSWTH 245
           N +S   
Sbjct: 230 NKISAAI 236


>gi|300694622|ref|YP_003750595.1| amino-acid-binding ABC transporter protein [Ralstonia solanacearum
           PSI07]
 gi|299076659|emb|CBJ35997.1| putative amino-acid-binding ABC transporter protein [Ralstonia
           solanacearum PSI07]
          Length = 283

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 83/257 (32%), Gaps = 15/257 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              +       L  T+F      + +IKKRG L  G       F  V  NG   GF  D 
Sbjct: 11  RLALGTGAAFALPITAF-AEGGSIAEIKKRGKLVVGTEAAYEPFEFV-ENGQVVGFGRDI 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A++  +      ++ + L  +     L S + D ++ +   T  R       F     
Sbjct: 69  LVAMADKLG---VGLEQMNLPFQGLLPGLLSHKFDFVATSVSITPERAKRFA--FSQPVG 123

Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-----HPIVFE 177
                 +       I+    L+G  +  Q G++++     + K    +         +F+
Sbjct: 124 VVRPVLMARADDASITRDLDLAGKVLGTQMGSSSQPAAEQFEKTLKEQRGKGYADTKLFQ 183

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              ++  A      D     I +  A      +P    I+ ++     LA      D E 
Sbjct: 184 AYPDVAIALSNKTVD--VAFIPSNVAAIQMRKQPGAFKIVGEVGQPRLLAWVANPQDLEI 241

Query: 238 YNIVSWTHYAMVTAEEL 254
              ++ T   +  + +L
Sbjct: 242 RKFINDTLDELRASGKL 258


>gi|222153167|ref|YP_002562344.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
 gi|222113980|emb|CAR42279.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
          Length = 282

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 16/217 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K F    L   +L   + S+ +          I+K+G LK   +  L   +    +  
Sbjct: 1   MKKLFIYLSLAFSLLVLGACSSKSDANGQAQWDKIEKKGSLKVATSGTLFPQSYHDKSNK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV+  + +   +     KI +  +       AL S QID            + +  
Sbjct: 61  LTGYDVEILKEIGKRLG---LKIDFTEMGVDGMLSALNSGQID--IAGYSIEKDSKNAKK 115

Query: 116 LAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             +     +     I+ +    GI S+  L G      A TT+ + +A  F A  + Y  
Sbjct: 116 FLYTDAHKYSYGSMIVRQSDDSGIKSLKDLKGKK-AAGASTTSYMKVAKKFGAELVIYDN 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +     +         R D    D             
Sbjct: 175 V---TNDVYLEDVANGRTDVILNDYYLQTMASKALPD 208


>gi|206576724|ref|YP_002238061.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288935046|ref|YP_003439105.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290509108|ref|ZP_06548479.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
 gi|206565782|gb|ACI07558.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288889755|gb|ADC58073.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289778502|gb|EFD86499.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 255

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 71/212 (33%), Gaps = 7/212 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G       F    +    +GFD+D  +A++ A   D   ++ +    +  F  L +
Sbjct: 25  TYTVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAKAEGFD---VKLVNTPWEGIFATLNT 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              DI+      T  R+    + F    +   Q  ++ +   + S++ L    + V   +
Sbjct: 82  GDRDIIISGITITDKRKQM--VDFSAPYFPAEQSIVVAQDSQVDSLAALKNEKVGVVNSS 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T ++ +++    +        F+    +          A  GD+  +      +      
Sbjct: 140 TGDIVVSEVLGKN--STAIKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQHPEKQFK 197

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           ++      +     A+ +G++E    ++    
Sbjct: 198 LVPDAKFERQYFGIAVAKGNSELLGKINAGLQ 229


>gi|315222453|ref|ZP_07864354.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus anginosus F0211]
 gi|315188477|gb|EFU22191.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus anginosus F0211]
          Length = 274

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 84/254 (33%), Gaps = 16/254 (6%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  L I    + S + S     K    +K   N     F   + NG  
Sbjct: 1   MKKVLKYSSLTALGLLTIGALAACSNSKSTTSSGKT--EIKVATNASPKPFNY-EENGKL 57

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D  K+++        F  L S +  +   N  +T  R      
Sbjct: 58  TGYEIEVVRAIFKD--SDKYKVKFETTEWSGIFAGLDSDRYQMAVNNISYTKERAG--KY 113

Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +   T  +    ++ K    I S+  + G +  V  GTTT   L  Y + H+     I 
Sbjct: 114 LYAAPTAKNPNVLVVKKSDKSIQSLDDIGGKTTEVVQGTTTAAQLEKYNQEHSGNPTKIS 173

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I +     + D    D        + N +     ++     + P     + +
Sbjct: 174 YTKADFQQIMSHLNDGKFDYKIFDK-IGVETVIKNQKLDNLKVIDLPSDQQPYVYPLLAK 232

Query: 233 GDTEWYNIVSWTHY 246
           G  E    V+    
Sbjct: 233 GQDELKTFVNRRIQ 246


>gi|296160735|ref|ZP_06843549.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295889038|gb|EFG68842.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 275

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 10/230 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L +   +  +     L  +KK G L  G       F  +  NG   GF+ D    + 
Sbjct: 11  LVMLALCAASVTAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEVG 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++++ L        L++ + D++      T  R       +          
Sbjct: 70  KEMGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPIADATDA 124

Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +       +   S ++G ++    G+     L  Y            +    +  A   
Sbjct: 125 LLKRANDSSLKQSSDIAGKTVGAGKGSAQLDQLKAYVATLPKPPEIREYVDNNQAYADLA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
           A R  A    ++ +    +   RP    ++          A  + +    
Sbjct: 185 AGRIVAVANSMTNIA--YVAKQRPETFAVVQPPFGAKVYFAYCLRKDADS 232


>gi|159186207|ref|NP_356123.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159141341|gb|AAK88908.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 279

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 82/230 (35%), Gaps = 11/230 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           F      +A+ + + K +G +  GI      +  V ++G   G D D  +A +  +    
Sbjct: 25  FVAPVDASAATVEEAKAKGKVVIGIQGDNSPWGFVNSSGVQDGLDADIGKAFADYLGVK- 83

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++++PL    R  AL + ++D+L      T  R     + +      +       K K
Sbjct: 84  --VEFVPLAVANRIPALLTGKVDVLFATMAMTAERAK--SIQYSKPYVGNVFSVYGPKDK 139

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+    L+  ++ V   +  +  +         K + + F+       A  + + +A  
Sbjct: 140 KIAGFDDLTSLNVGVPKSSAMDTAITAGA---GSKANILRFDDDAANIQALISGQVEAVG 196

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           G++   Y  +L      ++    D+            G+ +W   ++   
Sbjct: 197 GNM--FYGDRLNKAAEGKYESKFDLT-TMYNGAGTRPGEKDWNETINAFL 243


>gi|223039625|ref|ZP_03609912.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
           [Campylobacter rectus RM3267]
 gi|222879196|gb|EEF14290.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
           [Campylobacter rectus RM3267]
          Length = 238

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 13/203 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G       F  V       GFD+D    L+     +    + + ++      AL++
Sbjct: 19  ELKIGTAANYPPFEYVDEQNKITGFDMDLVAELAKRAGFEY---KIVNMSFDGLIPALKT 75

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAG 153
            +ID ++     T   +    + F    Y     ++  K    I+S   L+G  + VQ G
Sbjct: 76  GKIDAVASAMSATD--DRRKSIDFTQAYYATENIYLRAKGNDAIASKEALNGKRVGVQQG 133

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E+       A       +  E    +    +  + DA   D S  Y        P  
Sbjct: 134 TVQEIAANAIAGAK-----VVPAEEPVPLIMGLKKGKIDALVLDSSIGYGFL--KKNPEI 186

Query: 214 HVILPDIISKSPLAPAIIQGDTE 236
                +       + A  +G   
Sbjct: 187 EEFYKEADGSEGFSIAFDKGKQA 209


>gi|308234144|ref|ZP_07664881.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Atopobium vaginae DSM 15829]
 gi|328943631|ref|ZP_08241096.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Atopobium vaginae DSM 15829]
 gi|327491600|gb|EGF23374.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Atopobium vaginae DSM 15829]
          Length = 323

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 99/277 (35%), Gaps = 14/277 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           K+ F +++    +   +    ++    + K   L+ G     + FA +  A+G  +GFD 
Sbjct: 53  KEAFDALIAQGPVASQADIDKSTWASQVAKAQKLRVGGVKTSILFASLDEADGKIRGFDA 112

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
                L+  +  D SK     + +  R   LQ++Q+D++      T  R+    ++F   
Sbjct: 113 GLVSLLTRYVLGDESKSDLTLVTSNTRESVLQNEQVDVVFATYSITDARKK--AVSFAGP 170

Query: 122 TYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Y   QG ++      I+ +S L+  ++  Q+G+T    L               F   E
Sbjct: 171 YYSTQQGIMVAQSNTTINGLSDLAQKNVAAQSGSTGPTILEQLAPEAK----VQEFTTDE 226

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTE--- 236
           E   A    R DAY  D +           P ++ ++ +           +         
Sbjct: 227 EARNALSQGRVDAYVIDETMQRG--SIVRNPGKYKLVGESFGPVDYYGIGLPLNSDGVDF 284

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
               +     A + AE   +   N  + +K  T P +
Sbjct: 285 VNTFLKKVEDAGLWAELWKVAIGNRTEATKVPTPPSI 321


>gi|299535496|ref|ZP_07048817.1| polar amino acid transport system substrate-binding protein
           [Lysinibacillus fusiformis ZC1]
 gi|298728696|gb|EFI69250.1| polar amino acid transport system substrate-binding protein
           [Lysinibacillus fusiformis ZC1]
          Length = 274

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 98/270 (36%), Gaps = 29/270 (10%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           ++        K    +  G  T       +   G+  G+DV+  RA+   +     + ++
Sbjct: 29  ASAQKTAQRGKDVQKIIVGTGTQFPNICFLDDKGNLTGYDVELVRAIDEKL--PEYEFEF 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             +      L+L++++ID ++   +    RE        P   F  +  +  K   I S+
Sbjct: 87  KTMEFSNLLLSLETRKIDFIAHQMEVNSEREEKFLFNKEPYNVFPLKVTVNEKNNAIQSI 146

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G ++ V   + + + +  Y K HN+  + +      +++      R DA     + 
Sbjct: 147 EDLKGKNVSVSPTSNSAVFIEKYNKEHNLGANIVYSSGSVDVNNQLATGRIDAIIT--TP 204

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
                      ++  ++ D                    +++   Y ++  +E+ + Q+ 
Sbjct: 205 FAVRYYNESNEAQQKVVGD-------------------ALLNSKVYFLLNKDEVKL-QER 244

Query: 261 INQVSKDTTNPDV-----QRFLGIDKSSNI 285
           +++   +  N  V     +++LG D + + 
Sbjct: 245 LDEAIVELKNEGVVSELSKKWLGDDYTVDF 274


>gi|328884997|emb|CCA58236.1| secreted protein [Streptomyces venezuelae ATCC 10712]
          Length = 320

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 84/249 (33%), Gaps = 22/249 (8%)

Query: 18  TSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +  S NA+ L      DI+K G +K G +            G   G D D   AL   + 
Sbjct: 49  SGGSANAAPLFSKLPADIQKAGVIKVGTDASYAPMEFT-EGGKIVGVDPDIAAALGKQLG 107

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITY 123
                 ++          ++ + + D++  +      R+            G+ F    +
Sbjct: 108 VK---FEFTSGTFDGLITSIYTGRQDVIMSSMTDNKKRQEGLDDNGKKIGKGIDFVD-YF 163

Query: 124 FDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVE 180
             G   ++ K   +G++S+  L G ++ VQ GT  E T           K     F+   
Sbjct: 164 SSGVSLLVKKGNPQGVNSLDDLCGKTVAVQRGTIYEDTFKAQATKCGANKLTIQAFDTDA 223

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E     +A    A   D      +  T+   ++  ++ +          + + +T+  + 
Sbjct: 224 EAQTRVKAGGAVADLNDYPVAAYIAKTSGGGNDFEVVGNQSDVGLFGIGVSKDNTQLRDA 283

Query: 241 VSWTHYAMV 249
           +     A++
Sbjct: 284 IKEALDAII 292


>gi|325996225|gb|ADZ51630.1| putative aminoacid ABC transporter binding protein precursor
           [Helicobacter pylori 2018]
          Length = 238

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 65/213 (30%), Gaps = 14/213 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L+I F   F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKK---ISCLLLVISFLGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 58  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 114 PYSYSGTIMLVRKDENRIKGIEDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +        R D       A+     T+    
Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSP 200


>gi|300870919|ref|YP_003785790.1| family 3 extracellular solute-binding protein [Brachyspira
           pilosicoli 95/1000]
 gi|300688618|gb|ADK31289.1| extracellular solute binding protein, family 3 [Brachyspira
           pilosicoli 95/1000]
          Length = 244

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 66/224 (29%), Gaps = 10/224 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           ++  L  G N     F  +  NG+  GFDV+    ++        KI+   +       A
Sbjct: 24  EKDVLYVGTNAEYPPFEYLDENGNVVGFDVEL---INEISKIIGKKIEIKDMTFDGLIPA 80

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++K IDIL      T  R+    + F    +   Q  I+ +     +       +  V 
Sbjct: 81  LEAKTIDILIAGITATESRKKV--INFSKPYFESQQAIIVKEDNNTITNFDSLNNTYTVG 138

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
                   +A              F R  +   A +  + DA   D              
Sbjct: 139 VVLGYVGDVA--LTESKKVDKIERFNRTADTVVALQNGKIDAAIMDYPIAVGYI---KNN 193

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                +   +S   L     + DT+    V+     +    +  
Sbjct: 194 EGLKAIKTDLSIQELCIGFRKEDTKLLEDVNKALDTLKENGKYD 237


>gi|260599091|ref|YP_003211662.1| Histidine-binding protein [Cronobacter turicensis z3032]
 gi|260218268|emb|CBA33212.1| Histidine-binding protein [Cronobacter turicensis z3032]
          Length = 265

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 87/252 (34%), Gaps = 18/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L +  L  ++F+                 G       F    +  + +GFD
Sbjct: 11  MVKSLLKAGLLMAALAGSAFAAQE----------TYVVGAGGTYRPFEFENSQKELEGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++ A   +   ++ +    +  F  L S   DIL      T  R+    + F  
Sbjct: 61  IDIIKAIAKA---ENFNVKLVNTPWEGIFATLGSGDRDILVSGITITDKRKQM--VDFSA 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +   Q  ++     ++S++ L    + V   +T ++ ++D    +N       F+   
Sbjct: 116 PYFPAEQSIVVPADSKVNSLAALKNEKVGVVNSSTGDIVVSDVLGKNNTA--IKRFDNTP 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A  GD+  +      +      ++      +     A+ +G+ E  N 
Sbjct: 174 LMLQELFEDGVSAAVGDVGVVKYYIKQHPEKQFKLVPDAKFERQYFGIAVAKGNDELRNK 233

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 234 INAGL-AKIVAD 244


>gi|288937536|ref|YP_003441595.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|288892245|gb|ADC60563.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 243

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 11/219 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G  T    F          GFD+D   AL   +    ++ Q+          AL+ 
Sbjct: 22  TLHFGTTTVNPPFVTANGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    +   +RE  +   F         G ++  K    + + L    I V  GT
Sbjct: 79  KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVIVNKDVAHTFADLKAKKIGVVKGT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212
             +  L D  KA       I ++ V    AA +A        D + L A +  N      
Sbjct: 137 LHQHYLRDKQKA----VQAIPYDDVASALAALKAGEITGVMSDFATLDAWQQENPDYAIM 192

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           +             A A+ + D E  N ++    A++  
Sbjct: 193 DERATDPAYYGKQYAIAVRKDDPELLNAINDALTAVMAT 231


>gi|220905021|ref|YP_002480333.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219869320|gb|ACL49655.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 247

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 10/207 (4%)

Query: 39  GINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           GI+     FA +    G   GFDVD    ++  +  +   I + P+       AL +KQI
Sbjct: 28  GIDPNYPPFAYMDEKTGQPAGFDVDSLNWIAKTMGFE---ITHKPMAWDGIIPALVAKQI 84

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTT 156
           D++      T  R     + F    +   + FI+     ++    L+    + VQ GT+ 
Sbjct: 85  DMVDSGMSITPERARV--VDFSEPYWTVSRVFIVPADSTLTPQDVLTKKVKLGVQRGTSE 142

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              +    +     +    +E            R +    D                   
Sbjct: 143 ANAIKQEQQEKGYPFELRFYESAPLAVEDLLNGRIEVALMDELPADDAIAK---GRAVKK 199

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSW 243
                       A+ +GD + + +++ 
Sbjct: 200 AGTHGEPDKFGVAMRKGDKDLHKLINE 226


>gi|315302221|ref|ZP_07873138.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria ivanovii FSL F6-596]
 gi|313629411|gb|EFR97627.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria ivanovii FSL F6-596]
          Length = 480

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 89/285 (31%), Gaps = 22/285 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+ +  FT    +A    +         G +T    F   + +G  
Sbjct: 1   MKKFSRFILTMAIACVAMFIFTGNGLHAKAAEE-----TYLIGTDTTFAPFEF-EKDGKH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT            +      +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDKIKNYDDLKGKKVAVKTGTEGYAFAEKIKDKYGF--EIVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ +    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGI 279
           +            + A  E     +N         N   + F+GI
Sbjct: 225 KELLEKFNAGLVNIKASGEYDEILENYLGKDAVKENTTEKGFMGI 269


>gi|304405415|ref|ZP_07387074.1| extracellular solute-binding protein family 3 [Paenibacillus
           curdlanolyticus YK9]
 gi|304345454|gb|EFM11289.1| extracellular solute-binding protein family 3 [Paenibacillus
           curdlanolyticus YK9]
          Length = 284

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 90/258 (34%), Gaps = 16/258 (6%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNAS----------ILGDIKKRGFLKCGINTGLVGFA 48
           M +     ++ L +  L FT+  + +             G  K+   +  G  T   G  
Sbjct: 1   MKRKHSLVIAALLVFTLIFTACGSESKPASGEASASADAGGAKEVKKIIIGTGTQFPGVC 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +  NG   GFDV+  R L   +  D  + ++  ++     L+L++ +ID+++   +   
Sbjct: 61  FIDENGKLTGFDVELVRELDKRL--DGYEFEFKTMDFSNLLLSLETNKIDVIAHQMEKNP 118

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            RE        P + F  +  +  K   + S+  L G  I V   +     L  Y + H 
Sbjct: 119 EREAKFLFNKEPYSIFLSKVAVSAKNNDVKSIEDLKGKKIQVSPTSNQAYFLKKYKEEHK 178

Query: 169 MKYHPI-VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             Y  I       ++     + R DA      AL       D       + + + +S + 
Sbjct: 179 DAYDLIFSSNGSNDLVQQIESGRIDATLSTDFALR-FYTDADGKEALKTVGEPLIQSDVL 237

Query: 228 PAIIQGDTEWYNIVSWTH 245
             + +   E  + +    
Sbjct: 238 FVLRKDSQELADQLDEAI 255


>gi|238762103|ref|ZP_04623076.1| Arginine-binding periplasmic protein 1 [Yersinia kristensenii ATCC
           33638]
 gi|238699831|gb|EEP92575.1| Arginine-binding periplasmic protein 1 [Yersinia kristensenii ATCC
           33638]
          Length = 243

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 79/216 (36%), Gaps = 18/216 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +    ++  +          +L+ 
Sbjct: 22  TVRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEM---QAECTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTQPYYDNSALFIAEKG-KVADLAALKGKRVGMQNGS 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T +  L       + +   + ++  +      +  R DA  GD + +        + ++ 
Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEW---LKQNNQL 188

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245
             + D ++ +         A+ Q +TE    +    
Sbjct: 189 AAVGDKVTDADYFGTGLGIAVRQNNTELQGKLDAAL 224


>gi|317403049|gb|EFV83586.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans
           C54]
          Length = 250

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 81/246 (32%), Gaps = 18/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L+ L    F   +      K+   L    +T  V F   + N  + GFD
Sbjct: 1   MIKR--KVAAALVGLSMAMFGAASGAYAQGKE---LVVATDTAFVPFEFKQGN-TYTGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +       +  P++       LQ+K ID+           +    + F  
Sbjct: 55  VDLWAAIAKELNVKY---KLQPMDFNGIIPGLQTKNIDVALAGITI--RDDRKKVIDFSD 109

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +  K   I     L+G ++ V+ GT T     D+ KA        +F  +
Sbjct: 110 PYYESGLAILVGEKNTDIKDAKSLAGKTVAVKTGTATV----DFLKAQVPDAKLKLFPNI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T  +     ++  + S      A  +G +E   
Sbjct: 166 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGSVKSGDFYGIAFPKG-SELVP 223

Query: 240 IVSWTH 245
            V+   
Sbjct: 224 QVNKAL 229


>gi|255326764|ref|ZP_05367840.1| extracellular solute-binding protein, family 3 [Rothia mucilaginosa
           ATCC 25296]
 gi|255295981|gb|EET75322.1| extracellular solute-binding protein, family 3 [Rothia mucilaginosa
           ATCC 25296]
          Length = 279

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K G L    NT    F   + NG   G D D   A++S +               +    
Sbjct: 45  KSGTLSVCTNTPYKPFEY-EENGTIVGLDADIANAIASDLGVKAQLTSISF-EGLDSGTG 102

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + Q DI       T  R+    + F  + + D    ++ K   I+S + L G S+  Q
Sbjct: 103 LATGQCDIALAGIGVTDERKS--KMEFTTVYFDDNLAILVPKGSSITSAADLKGVSVGAQ 160

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T+ E    +           I +E    + +A +  +  A   ++S +      +   
Sbjct: 161 QATSGETYAKE------NGAEVIQYEDTSLMFSALKTGQVKAVAANLSVVSEALTNDPD- 213

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S  +   D  +   +A A+   +       + T   +    EL 
Sbjct: 214 SFKIAYQDSENTEQIAAAVSSNNKALLTKANATIAKLKENGELD 257


>gi|221210751|ref|ZP_03583731.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
 gi|221169707|gb|EEE02174.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD1]
          Length = 260

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++  ++           +G   GF VD   AL + +    ++  ++  +       L 
Sbjct: 25  KEIRLAVDPTYPPLEYKLPDGTLTGFGVDITNALCAEL---HARCVWVQSSFDGMIPGLL 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D+++ +   T  R     +AF           I  K    + + + L G  + V+ 
Sbjct: 82  ARKFDVIASSMTITPKR--MQQIAFTNRISNAPARLIARKGSPLLPTAAALKGKRVGVEQ 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+         ++        + ++  +++ A     R DA      A     L   +  
Sbjct: 140 GSAQADYAIANWQPAG--AQIVSYQNQDQVYADLVTGRLDAAFQASIAASDGFLKKPQGK 197

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +   +   I  +          + + DTE     +    A + A
Sbjct: 198 DFAFVGAPIEDTKYFGQGDGLGLRKQDTELREAFNRAL-ATILA 240


>gi|148543958|ref|YP_001271328.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|227364871|ref|ZP_03848917.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325682504|ref|ZP_08162021.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530992|gb|ABQ82991.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus reuteri DSM 20016]
 gi|227070075|gb|EEI08452.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324978343|gb|EGC15293.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 503

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 90/274 (32%), Gaps = 38/274 (13%)

Query: 1   MY--KDFFVSILCLIILFFTSFST---------------------NASILGDIKKRGFLK 37
           M   K   + ++    +  T  +                      +   +  IK++G L 
Sbjct: 1   MKGFKHLLLLMVIAFPILCTPITALAANESSSTSSSSANNPSQVASNDSVQKIKQKGTLV 60

Query: 38  CGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            G++     +           + GF+V   +  +  +      +    ++     +AL++
Sbjct: 61  VGMSADYPPYEFTTKENGKTKYVGFEVSLAKQFAKDLGVK---LVIKNMDFDSLLVALET 117

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQA 152
            +ID +    + T  R+    + F    Y     F+++K  K  + +V   +G ++  Q 
Sbjct: 118 GKIDAIISGMNVTAERKK--SVDFSNTYYSGDSYFLINKGDKDKLVNVKSFNGKNVGAQN 175

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     ++      N K       ++  +    ++H+ D    D +   A    N    
Sbjct: 176 GTLQSTLISKEMPKANGKG----LAKLSSLVIGLQSHKYDGILMDAATAKAYAANNSNLY 231

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +   +A A  +GDT   N  + T  
Sbjct: 232 AFNS-KLPNTAGGIAMAFPKGDTSLVNAANQTIK 264


>gi|194467780|ref|ZP_03073766.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194452633|gb|EDX41531.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 503

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 90/274 (32%), Gaps = 38/274 (13%)

Query: 1   MY--KDFFVSILCLIILFFTSFST---------------------NASILGDIKKRGFLK 37
           M   K   + ++    +  T  +                      +   +  IK++G L 
Sbjct: 1   MKGFKHLLLLMVIAFPILCTPITALAANESSSTSSSSANNPSQVASNDSVQKIKQKGTLV 60

Query: 38  CGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            G++     +           + GF+V   +  +  +      +    ++     +AL++
Sbjct: 61  VGMSADYPPYEFTTKENGKTKYVGFEVSLAKQFAKDLGVK---LVIKNMDFDSLLVALET 117

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQA 152
            +ID +    + T  R+    + F    Y     F+++K  K  + +V   +G ++  Q 
Sbjct: 118 GKIDAIISGMNVTAERKK--SVDFSNTYYSGDSYFLINKGDKDKLVNVKSFNGKNVGAQN 175

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     ++      N K       ++  +    ++H+ D    D +   A    N    
Sbjct: 176 GTLQSTLISKEMPKANGKG----LAKLSSLVIGLQSHKYDGILMDAATAKAYAANNSNLY 231

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +   +A A  +GDT   N  + T  
Sbjct: 232 AFNS-KLPNTAGGIAMAFPKGDTSLVNAANQTIK 264


>gi|300215129|gb|ADJ79545.1| Amino acid ABC transporter [Lactobacillus salivarius CECT 5713]
          Length = 499

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 15/227 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             L  +K++G L  G++     +          ++ G D+   + L+  +      +   
Sbjct: 43  DSLKKVKEKGTLVVGLSADYPPYEFTTKQDGKTEYVGIDIQIAKKLAKDLGVK---LVIK 99

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISS 139
            +N     +AL++ +ID +    + T  R     + F  I Y  G+  +++K  K   +S
Sbjct: 100 NMNFDSLLVALETGKIDTIISAMNPTEERRK--SVDFSNIYYSGGKYIVINKKDKSKYTS 157

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                G ++  Q GT     +   F             ++  +  A ++ +      +  
Sbjct: 158 KESFKGQTVGAQNGTLEYNLIKQQFP----GATVKGLAKLNNLIIALQSGKVSGVLMEEP 213

Query: 200 ALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
              A    N     +     +       A A  +G T      + T 
Sbjct: 214 TAKAYVQNNPNLYAYNSKVSVDVNETGAAMAFPKGATALTQAANKTI 260


>gi|254464971|ref|ZP_05078382.1| extracellular solute-binding protein, family 3 [Rhodobacterales
           bacterium Y4I]
 gi|206685879|gb|EDZ46361.1| extracellular solute-binding protein, family 3 [Rhodobacterales
           bacterium Y4I]
          Length = 251

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 83/230 (36%), Gaps = 23/230 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   +L   +          I +   L+ G++ G   F  VK +   +GF+
Sbjct: 1   MLKSLTFGALAAAVLGTAA----------IAETEQLRVGMSGGYFPFTFVKQD-QLQGFE 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+      D   I Y  +       AL+S +ID ++     T  RE     AF  
Sbjct: 50  VDVMDAVGEVAGLD---IAYETMTFSGLVGALESGRIDTIANQITITPEREA--KFAFSQ 104

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG   ++ K    + SV  L G S+ V  G+  E  L +   A         +E  
Sbjct: 105 PYVIDGAQVVVRKGNEEVGSVEDLRGRSVAVNLGSNFEQLLHELPYA--EDIDIRTYESN 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLA 227
              D A    R DA+  D  +   L   +  P E    P  +I +  P A
Sbjct: 163 IAQDTAL--GRVDAFVMDRVSSVQLIKESPLPLELAGAPFSEIRNALPFA 210


>gi|321314009|ref|YP_004206296.1| putative ABC transporter binding lipoprotein [Bacillus subtilis
           BSn5]
 gi|320020283|gb|ADV95269.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           BSn5]
          Length = 287

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 70/262 (26%), Gaps = 21/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSF-----STNASI-LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    S      L   +      + +       IK +G +    +  L   + 
Sbjct: 1   MKSFMQSKAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSY 60

Query: 50  VKAN---GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +       G++V+  R  +  +     K+++  +       A+ S Q+D  + + D 
Sbjct: 61  HDTDSGSDKLTGYEVEVVREAAKRLG---LKVEFKEMGIDGMLTAVNSGQVDAAANDIDV 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  RE     +      +           GI ++  L G      A T       +  + 
Sbjct: 118 TKDREKKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTVYM----EVARK 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +  K         E+        R D    D              +  +        +  
Sbjct: 174 YGAKEVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQ 233

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           A  + + +      ++     M
Sbjct: 234 ALVMKKSNAALQKKMNEALKEM 255


>gi|261213945|ref|ZP_05928226.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|260915552|gb|EEX82413.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
          Length = 179

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 9/153 (5%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M       +++   +     +  + A+ + + ++   L  G       F  +K +G   G
Sbjct: 1   MKMRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGACPPFNFIKPDGTLSG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  RA    +    +K +++  +      ALQS + D    +   T  R+    + F
Sbjct: 61  FDVDIARARCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDF 115

Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
               Y    G    K   I   +   L+G +I 
Sbjct: 116 TNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 148


>gi|167770580|ref|ZP_02442633.1| hypothetical protein ANACOL_01926 [Anaerotruncus colihominis DSM
           17241]
 gi|167667175|gb|EDS11305.1| hypothetical protein ANACOL_01926 [Anaerotruncus colihominis DSM
           17241]
          Length = 219

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 8/200 (4%)

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +  N    G D+D  +A+   +      ++  P++   + + L S +I  +      
Sbjct: 1   MGFMDENNQVVGADIDLAQAVCDKLG---MTLEAKPIDWDAKDMELSSDKISCIWNGLTV 57

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-ADYFK 165
           T  RE +  L   P    + Q  ++     I + + L+G ++  Q  ++    L  D   
Sbjct: 58  TAEREEAYEL--SPAYMNNEQVIVVMNDSEIKTKADLAGKTVAAQKDSSGLEALQKDEIY 115

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                     +    +        RCDA   D          N +P   V+L D ++   
Sbjct: 116 TSIKDGAAKEYGNYVDAMTDLEIGRCDAIVMDSVVANYYIAENSKPM--VVLDDKMASEE 173

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
            A A  +G+T   + V    
Sbjct: 174 YAIAFKKGNTALKDAVWGAL 193


>gi|169630134|ref|YP_001703783.1| putative glutamate ABC transporter, periplasmic protein
           [Mycobacterium abscessus ATCC 19977]
 gi|169242101|emb|CAM63129.1| Putative glutamate ABC transporter, periplasmic protein
           [Mycobacterium abscessus]
          Length = 340

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 93/310 (30%), Gaps = 47/310 (15%)

Query: 21  STNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF----CRALSSAI 71
           S   S      LG I+  G +  G      G      +    GFDV        A++  +
Sbjct: 31  SACGSTEPRQLLGSIRG-GTVILGTKFDQPGVGLQHPDKKMSGFDVKISEYVVNAIADEL 89

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 I++    + +R   + +  +D+++ +      R  +  ++F        QG ++
Sbjct: 90  GVKHPTIRWYETPSAQREQLIDNGTVDMIAGSYSVNYSR--AQKVSFAGPYLITYQGLLV 147

Query: 132 HKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            K     +       G  +C  +G+T    + +             F+       A R  
Sbjct: 148 RKADDSLTTLDDLNRGKKLCSVSGSTPAQNVKNLLP----GTQLQEFDSYSSCVEALRRG 203

Query: 190 RCDAYTGDISALYALKLTND-------------------RPSEHVILPDIISKSPLAPAI 230
           + DA T D + L       +                    P       D  S+      +
Sbjct: 204 KVDALTTDETILAGYAKRYEGEFKLIQMNYELSKPLCIGNPKRQRRNGDPFSREVYGIGL 263

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
            +GDT     +      M+          ++ +   D+T        G +K +  G   G
Sbjct: 264 ARGDTAAIEAIDRALDKMIATGAWD---SDLREALGDSTID------GWEKRAESGTY-G 313

Query: 291 LTKDWTYRII 300
           L  D +   I
Sbjct: 314 LRPDPSLAAI 323


>gi|121608672|ref|YP_996479.1| glutamine ABC transporter periplasmic protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553312|gb|ABM57461.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 252

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 25/256 (9%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K    + L + +         A+          L   I+T  + F   + +  +
Sbjct: 1   MKHLLVKLLTAASLAVSLTAPICTPAAAAEP--------LLVAIDTAFIPFEFKQGD-SY 51

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D   A++  +       +  P++      ALQ+K +D+          R+    +
Sbjct: 52  VGFDIDLWDAVAKEL---KLPYKLQPMDFNGILPALQTKNVDVALAGIAIKDERKKV--I 106

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y  G   ++     I  V+ L G ++ ++ GT T     DY KAH +      F
Sbjct: 107 DFSDGYYDSGLLLMVASDSKIGGVADLKGKTLALKTGTATV----DYAKAHFVGTTLRQF 162

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             ++         R DA   D   +     T         +   +          +G   
Sbjct: 163 PNIDNAYLELMTGRVDAAMHDTPNILHYIATAGAGKV-RAVGTQMMAHQYGIGFPKGSP- 220

Query: 237 WYNIVSWTHYAMVTAE 252
               V+    A + A+
Sbjct: 221 LRTQVNAAL-AKIKAD 235


>gi|150376416|ref|YP_001313012.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150030963|gb|ABR63079.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 258

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 70/219 (31%), Gaps = 17/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G       F  V + G   GFDV+   AL   +     + + +  +       L +
Sbjct: 24  KLRIGTEGAYPPFNFVDSTGKIGGFDVEIGLALCERM---KIECEVVAQDWDGIIPGLLA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
            + D++  +   T  R+  +   F    Y         K  GI   S   L G  I  Q+
Sbjct: 81  SKYDMIIASMFITEDRKKQVA--FTDPYYLAAMTHAAPKGAGITDFSNEALKGKVIGAQS 138

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT     ADY  A        ++   +E +      R D   GD+  L      ND   
Sbjct: 139 GTTQ----ADYIAAVYPDAEIKLYPTQDEANLDMVNGRLDLQVGDMLPLLDWVTKNDDGK 194

Query: 213 ------EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    I         +  A+ Q D E    ++   
Sbjct: 195 GCCELIGEPITDKKFVGDGVGIAVRQEDNELREKLNKAL 233


>gi|288904530|ref|YP_003429751.1| ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus gallolyticus
           UCN34]
 gi|306830524|ref|ZP_07463692.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977501|ref|YP_004287217.1| inner membrane amino-acid ABC transporter permease yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|288731255|emb|CBI12805.1| putative ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus gallolyticus
           UCN34]
 gi|304427318|gb|EFM30422.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177429|emb|CBZ47473.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 523

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 93/289 (32%), Gaps = 31/289 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------- 53
           M K        +++LF    S +A          +L+ G+      F   + +       
Sbjct: 1   MKKLLLSCFAAVLLLFGGMTSIHADE--------YLRVGMEAAYAPFNWTQDDDSNGAVP 52

Query: 54  ----GDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ ++  +   ++           AL S +ID+++     T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIADSLGKELLVVK---TTWTGLIPALTSGKIDMIAAGMSPTD 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ KK   ++ + L+  S   +  +   + L +     +
Sbjct: 110 ERKKEIA--FSDSYYTSYPVIVVSKKGDYANATSLADFS-GAKLTSQQGVYLYNLIDQIS 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISK 223
                       ++  A  +   D Y  +     + +  N                  S 
Sbjct: 167 GATKETAMGDFNQMRQALESGIIDGYVSERPDAISAENANSDFKMISFEEGQGFSTSESD 226

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           + +A  + + DTE    V+     +   E L +  K I +   D +  D
Sbjct: 227 TAIAVGLRKDDTEMLAKVNAVLAGISEDERLELMDKMIEEQPSDNSEED 275


>gi|271966003|ref|YP_003340199.1| amino acid ABC transporter [Streptosporangium roseum DSM 43021]
 gi|270509178|gb|ACZ87456.1| amino acid ABC transporter [Streptosporangium roseum DSM 43021]
          Length = 317

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 76/247 (30%), Gaps = 19/247 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G LK   + G        ++G    GFD    RA++  +      +         +  
Sbjct: 73  KSGGLKVVSSIGYPPMELFASDGKTPIGFDPALARAIARKLGVK---VTITDEEFNSQIP 129

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASI 148
            + + + D +  +      R     + F       G G ++ K     ++    L G ++
Sbjct: 130 GVLTGRYDFVISSMTDNPER--QGQVTFVD-YVQAGSGMLVKKGNPAGVTGPKDLCGKTV 186

Query: 149 CVQAGTTT----ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V    ++    E   AD  K      + + F    E        R  A   D       
Sbjct: 187 SVVDNGSSMELAESYDADCKKDGKAAVNILKFPGDTEAMLQVSNGRAQAIVTD---YVVA 243

Query: 205 KLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNI 261
              +  P   +    +     P    +   + E    V     A++ + E G  +   N+
Sbjct: 244 AYKSADPKLAMEAIALEGTESPWGIGMKPDNKELIESVKGALDALIQSGEYGKLLAAWNL 303

Query: 262 NQVSKDT 268
           ++++  +
Sbjct: 304 DKLAVQS 310


>gi|225573414|ref|ZP_03782169.1| hypothetical protein RUMHYD_01606 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039224|gb|EEG49470.1| hypothetical protein RUMHYD_01606 [Blautia hydrogenotrophica DSM
           10507]
          Length = 284

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/330 (16%), Positives = 102/330 (30%), Gaps = 75/330 (22%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  ++++   +               A  L  + K G L   +N G   +  
Sbjct: 7   MKKVVAFMLSAMLMVCLGACGSSSSDGSASADKEAQTLNKVLKNGKLTVVLNIGNAPWTY 66

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              + G++ G  V+  +     +  +       PL       ++ S + DI+  N   T+
Sbjct: 67  KDDSTGEYTGMAVELIQGYCDQLGVE---CSIEPLEFSSLISSVNSGKADIICTNLSRTV 123

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAH 167
            R  S  + F      D    I  K    S       G ++  + G++ E  +AD F   
Sbjct: 124 ER--STNVMFSDPVGIDYGVVICKKGAFSSLDEVNQEGVTLTTETGSSFEGVVADVFPNA 181

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            M       +      AA  A R D    +++                            
Sbjct: 182 TMS----AVDTTPNALAAVNAGRADGMVTNLAI--------------------------- 210

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
                                  A+EL    + + ++ +D    DV  F  +D +     
Sbjct: 211 -----------------------AKELVAANEGL-EIMEDYCYTDVMAF-AVDNTYLNTT 245

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
            LG    +    I+  G YGE++++ +G +
Sbjct: 246 LLGSFNSYLRN-IKSNGTYGEIYEKYIGTK 274


>gi|307544952|ref|YP_003897431.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307216976|emb|CBV42246.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 257

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 36/280 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59
           M +   +    L  L     +               + G  T     FA   A+G+  G+
Sbjct: 1   MKR---LLTATLTSLCLVPLAQAEVT----------RVGFATEPYPPFATTDASGELHGW 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  RA+  A      + + +  +      AL   +ID ++ +   T  R  ++   F 
Sbjct: 48  EVDITRAICEAA---ELECKLVTTSWDGLIPALTGGKIDFIAASLSITDKRRETIA--FS 102

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y         K   +   S+ L+G ++ VQ+ +  +     +F           ++ 
Sbjct: 103 DKYYQTPAALAGAKGVELEPTSEGLAGKALGVQSASIHQAYAQAHFPEA----TLREYQT 158

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQG 233
            +E +    A R DA   D   +     + +      +  D+          +   + Q 
Sbjct: 159 QDEANQDLFAGRLDATLADRLIIEQFLESKEGQLCCEMTGDVAHDPQTLGDGIGFGVRQD 218

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           D      ++    A V A          ++++    + D+
Sbjct: 219 DDALRERLNEAI-AEVRAN------GTYDEITARYFDFDI 251


>gi|289432312|ref|YP_003462185.1| extracellular solute-binding protein family 3 [Dehalococcoides sp.
           GT]
 gi|288946032|gb|ADC73729.1| extracellular solute-binding protein family 3 [Dehalococcoides sp.
           GT]
          Length = 257

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 14/217 (6%)

Query: 36  LKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +    +     F  V       +GFD+D  +A++        ++ +  +        + +
Sbjct: 38  ITVVTDATWAPFEYVNEQTHAIEGFDIDLMKAIAEKA---NLEVTFQNVAWDALLAGMAT 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            Q  +       T+L +      F    +  GQ   + K    I S   L+G  +  Q G
Sbjct: 95  GQYKVAIS--SITILPDRLEKWLFSEPYFNAGQMVCVQKTNTTILSHDDLTGKRVAAQTG 152

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT          A         ++ +          + DA   D     A+   N  P +
Sbjct: 153 TTGFFEAQKIANA-----TVKSYDEIGLAFQDLINGQIDAVICDNP--VAIDYVNANPDK 205

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              +    +      ++ +G TE    ++    A++ 
Sbjct: 206 LKKVGTAFTDEYYGISVAKGQTEILARINLGLAAVIA 242


>gi|289449883|ref|YP_003475333.1| arginine ABC transporter periplasmic arginine-binding protein ArtP
           family protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184430|gb|ADC90855.1| arginine ABC transporter, periplasmic arginine-binding protein ArtP
           family protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 301

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 87/305 (28%), Gaps = 46/305 (15%)

Query: 1   MYKDFFVSILCLIILFFTSF-----------------STNASI----------------L 27
           M K   +S+L +  L   +                     ++                 L
Sbjct: 1   MKKLVTLSLLLVFALTMVACNGEPSPATKSDSSMQSKPAASATAEGSRQSSDESTADPAL 60

Query: 28  GDIKKRGFLKCGINTGLVGFA---EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +IKK+G L    +     +          +  GFD++  R+L+ +I  +   ++   L+
Sbjct: 61  QEIKKKGKLVLATSADYPPYEWHLMQNGKDEIVGFDIEIARSLAKSIGVE---LEIKDLD 117

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                 ++ S Q DI       T  R  S+ +                       +    
Sbjct: 118 FDAIVPSITSGQADIGIAGLSVTKERLESVNMTQPYFQNKQIILVNKSAAGQYKKLEDFK 177

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++  Q G+  E T+ + F     +       ++  +         D      S+    
Sbjct: 178 GKTVGAQTGSIQETTVHEKFP---PEVKVKSLAKLNNLVMEVLNGTADGLVIAKSSGEQY 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
                   + V L   +   P    A+ +G+       +     ++   ++        +
Sbjct: 235 VKLFP---DLVALDITLPDEPGVCIALKKGNDALTTYFNRELQKLIDTGKVKEWISQYEK 291

Query: 264 VSKDT 268
           +S D 
Sbjct: 292 ISADA 296


>gi|254714048|ref|ZP_05175859.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           ceti M644/93/1]
 gi|254716895|ref|ZP_05178706.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           ceti M13/05/1]
 gi|261218699|ref|ZP_05932980.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261321803|ref|ZP_05961000.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
 gi|260923788|gb|EEX90356.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261294493|gb|EEX97989.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
          Length = 177

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 7/151 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RAL   +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
             Y    G    K   I   +   L+G +I 
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKENLAGKTIG 146


>gi|167582814|ref|ZP_02375688.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           thailandensis TXDOH]
          Length = 264

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 84/252 (33%), Gaps = 20/252 (7%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +  F +++ C + +   + + +A +         L+ G+      F    ANG+ +GF
Sbjct: 1   MKRLQFRLALACALSVAAGAGAAHADVSQ------TLRFGLEAQYPPFESKAANGELQGF 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+           +++  +      ALQ ++ D ++   + T  R     + F 
Sbjct: 55  DIDVGNAVCKEA---KLACKWVETSFDGLIPALQGRKFDAINSAMNATDQR--RQAIDFT 109

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            + Y      I     G+  +   L G  + V  G+  E     ++         + ++ 
Sbjct: 110 TVIYRVPTRLIARADSGLAPTPESLKGKRVGVLQGSIQETYANAHWA--GAGVQVVAYQD 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233
             +  +   A R D       A     L+         +   +         +A  + +G
Sbjct: 168 QNQAYSDLTAGRLDGTLVLAPAGQRGFLSRPDAKGFAFVGQAVRDDKILGSGIAFGLRKG 227

Query: 234 DTEWYNIVSWTH 245
           D      ++   
Sbjct: 228 DEALKLRLNAAI 239


>gi|167564613|ref|ZP_02357529.1| cyclohexadienyl dehydratase [Burkholderia oklahomensis EO147]
 gi|167571755|ref|ZP_02364629.1| cyclohexadienyl dehydratase [Burkholderia oklahomensis C6786]
          Length = 259

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 73/266 (27%), Gaps = 18/266 (6%)

Query: 1   MYKDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K                    +  AS L D+  RG L+         +   + +G ++
Sbjct: 1   MKKTLLALACWAGFAHAQTVPQPAAPASRLDDVLARGTLRVCTTGDYRPYTYRREDGAFE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D   +L+ ++      ++         F+A    + D+       TL R+      
Sbjct: 61  GIDIDMAASLAKSLGVKAEFVKTTWPTLTNDFVA----KCDVAVGGISTTLERQK--RAF 114

Query: 118 FRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           F      DG+  I            +        + V  G T E     +F         
Sbjct: 115 FTQPYVTDGKTPIARCADVERYQTIAQIDQPQTRVIVNPGGTNERFAKQHF----THARI 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            VF     I     A   D    D S    L+   +     V           A  + +G
Sbjct: 171 TVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRG 229

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D  +   V    +      EL     
Sbjct: 230 DVVFQQYVDQWLHLARATGELQAISD 255


>gi|163739220|ref|ZP_02146632.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Phaeobacter gallaeciensis
           BS107]
 gi|161387620|gb|EDQ11977.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Phaeobacter gallaeciensis
           BS107]
          Length = 259

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 85/222 (38%), Gaps = 17/222 (7%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K G+       FA + ++G W G+++D   A+ +A   D       P+       +L  
Sbjct: 29  VKIGVAAEPYPPFASLDSSGQWVGWEIDVINAVCAAAELD---CVITPVAWDGIIPSLTG 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           +Q+D +  +   T  R  +  + F    Y      +  K   I  +   L+G  + +QA 
Sbjct: 86  QQVDAIMASMSITEERLKT--IDFSDPYYNTPAVIVADKSMDIEATPESLAGKVVGIQAS 143

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +    ++FK         V++  +E +    A R DA T   S   A  + +D    
Sbjct: 144 TIHQAYAQEHFK----DSELRVYQTQDEANQDLFAGRIDA-TQADSIAMADFVGSDAGGC 198

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
             I   + +   +        + +GD++    ++    A++ 
Sbjct: 199 CEIKGAVANDEAILGKGVGAGVRKGDSDVLAALNKGIAAILA 240


>gi|83718431|ref|YP_443786.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           thailandensis E264]
 gi|167620955|ref|ZP_02389586.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           thailandensis Bt4]
 gi|83652256|gb|ABC36319.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           thailandensis E264]
          Length = 264

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 83/252 (32%), Gaps = 20/252 (7%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +  F +++ C + +   + +  A +         L+ G+      F    ANG+ +GF
Sbjct: 1   MKRLQFRLALACALSVAAGAGAARADVSQ------TLRFGLEAQYPPFESKAANGELQGF 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D   A+           +++  +      ALQ ++ D ++   + T  R     + F 
Sbjct: 55  DIDVGNAVCKEA---KLACKWVETSFDGLIPALQGRKFDAINSAMNATDQR--RQAIDFT 109

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            + Y      I     G+  +   L G  + V  G+  E     ++         + ++ 
Sbjct: 110 TVIYRVPTRLIARADSGLAPTPESLKGKRVGVLQGSIQETYANAHWA--GAGVQVVAYQD 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233
             +  +   A R D       A     L+         +   +         +A  + +G
Sbjct: 168 QNQAYSDLTAGRLDGTLVLAPAGQRGFLSRPDAKGFAFVGQAVRDDKILGSGIAFGLRKG 227

Query: 234 DTEWYNIVSWTH 245
           D      ++   
Sbjct: 228 DEALKLRLNAAI 239


>gi|254250621|ref|ZP_04943940.1| Extracellular solute-binding protein, family 8 [Burkholderia
           cenocepacia PC184]
 gi|124879755|gb|EAY67111.1| Extracellular solute-binding protein, family 8 [Burkholderia
           cenocepacia PC184]
          Length = 314

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 67/212 (31%), Gaps = 21/212 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGF 59
           M          L +L     S  A           L+ GI+      F    A G WKG+
Sbjct: 52  MRSRVRRVAAALFVLGLAPISHAAQP--------TLRVGIDAESYPPFFSKDAGGKWKGW 103

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    L +A      + +   +       ALQ+ +ID++  +   T  R+    + F 
Sbjct: 104 EIDV---LDAACGKLNVRCELTDIAWDGLIPALQNHKIDVIWSSMTITGERQK--AIDFS 158

Query: 120 PITYFDGQGFIMHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
              Y     F+  K               G+ I V+AGT     L   FK          
Sbjct: 159 RAYYESPTVFVGAKSDRRRVDCAVPATFKGSVIGVEAGTNFSAFLDARFKQ---DAQIKA 215

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           F++ +   A   + R D          A   +
Sbjct: 216 FDKFDNALADLVSGRVDYVQEGKGLFTAFLAS 247


>gi|291533771|emb|CBL06884.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Megamonas hypermegale
           ART12/1]
          Length = 175

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 6/155 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +S+L   +L     S        I      +  G++           N +  GFDVD  +
Sbjct: 1   MSMLLGAMLVAGCGSEEKETSSAIGGSDKPIVIGLDDSYPPMGFKDENNEIVGFDVDLAK 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
             +  +      +++  ++   +   L+S ++DIL    D T  R+    + F      +
Sbjct: 61  EATKRL---NRPVEFKAIDWSSKEAELKSGRVDILWNGLDITEKRKE--NMLFSDPYMKN 115

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
            Q   +     I S+ QL G  I  Q+G+T E  L
Sbjct: 116 RQVVFVPVNSDIKSLDQLKGKVIGTQSGSTAEDFL 150


>gi|83719180|ref|YP_443797.1| cyclohexadienyl dehydratase [Burkholderia thailandensis E264]
 gi|83653005|gb|ABC37068.1| cyclohexadienyl dehydratase [Burkholderia thailandensis E264]
          Length = 264

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 79/267 (29%), Gaps = 15/267 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M     +  L     F  + +          AS L D+  RG L+         +   + 
Sbjct: 1   MKMKITLLALACCAGFAHAQAAREHAAPAMPASRLDDVLARGTLRVCTTGDYKPYTYRRE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G ++G D+D   +L+ ++    + ++       + F+A    + DI       TL R+ 
Sbjct: 61  DGAFEGIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQK 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +      +T            +   +++Q+      V A          + K H     
Sbjct: 117 HVFFTQPYVTDGKTPIVRCADVERYQTIAQIDQPQTRVIANPGGTN--ERFAKQHFTHAR 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             VF     I     A   D    D S    L+   +     V           A  + +
Sbjct: 175 ITVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPR 233

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259
           GD  +   V    +      EL     
Sbjct: 234 GDVVFQQYVDQWLHLARETGELQAISD 260


>gi|87121939|ref|ZP_01077824.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Marinomonas sp. MED121]
 gi|86162737|gb|EAQ64017.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Marinomonas sp. MED121]
          Length = 516

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 75/204 (36%), Gaps = 11/204 (5%)

Query: 1   MYKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K      +   LIIL        A  L +I+ +  ++ G+ T    +  + + G+  G
Sbjct: 1   MLKAVSSLFMGTFLIILSSAFHHAFADDLAEIQAKDLIRIGVKTDYPPWGMLSSAGEIVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+ D    + + +     +++   + +  RF  L+  ++D+L      T  R        
Sbjct: 61  FEPDLAHLIGAELG---VQVKLKSVTSGNRFQLLEEGEVDVLIATVGDTQQR-RKRVTMI 116

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            P  Y  G   +  K   I+   Q+ G  IC+  G      L       +    P++   
Sbjct: 117 EPHYYRSGVTLLSAKADKINRWEQIRGEKICLYGGAYFNKQLIQ-----DYDIEPLILFN 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALY 202
             +   A    +C A+  D  A+Y
Sbjct: 172 TRDAQLALLTKKCRAWAYDNGAIY 195


>gi|282165412|ref|YP_003357797.1| putative amino acid ABC transporter amino acid binding protein
           [Methanocella paludicola SANAE]
 gi|282157726|dbj|BAI62814.1| putative amino acid ABC transporter amino acid binding protein
           [Methanocella paludicola SANAE]
          Length = 279

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 74/269 (27%), Gaps = 36/269 (13%)

Query: 1   MYKDFFVSILCLIILFF--------------------TSFSTNASILGDIKKRGFLKCGI 40
           M K   + ++  +++                      T+       L      G L    
Sbjct: 5   MTKALLLLLMISMVVVAISGCTTSPAVTPTPAANATPTATPAQNMTL---LTPGTLYVAT 61

Query: 41  NTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
                 F  +      ++GFD+D    +   +      + Y           +Q+K+ D 
Sbjct: 62  EAHYPPFENINTTTTAFEGFDIDVMNEIGKELG---LNVTYSDQAFDTIITGVQAKKFDC 118

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTE 157
                  T  R     + F    Y      I     +  I + S + G  + VQ GT  +
Sbjct: 119 AISAFTITPKR--QETIDFTDWYYESPGQAISVRAGETAIKNASDIVGKKVGVQMGTVGQ 176

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +  Y   +        +  + E   A +    DA  GD             P ++  +
Sbjct: 177 DAVKAY--PNVSAEDVKAYATMNEAFMALKKGEVDAVVGDQPVSEPYIKNY--PGDYKFI 232

Query: 218 PDIISK-SPLAPAIIQGDTEWYNIVSWTH 245
            + ++        + + +      ++   
Sbjct: 233 GEPLTATEYFGIVVNKDNPGLTAAINQAL 261


>gi|37681431|ref|NP_936040.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio vulnificus YJ016]
 gi|37200183|dbj|BAC96011.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio vulnificus YJ016]
          Length = 307

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 78/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K +    L L+     + +   S L +I   G L+ G              N  ++GF
Sbjct: 50  MKKTWLALGLGLLAASTLANAQ--SRLNEILDNGVLRVGTTGDWNPMTMKDPANNSYRGF 107

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +   ++ R    G +  
Sbjct: 108 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITADKYD-ITGSASLSMSRAKVAGYSQP 163

Query: 120 PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  S        +    GT  E  + ++F +       IV E
Sbjct: 164 YFYLAFVPVVQKKDLGKYSDWSDFDKADVKVAATLGTVQEKMVKEFFPSAQH----IVIE 219

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 220 APARDFQELLAKRADVSVTSNVEAATLVEKFQQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 278

Query: 238 YNIVS 242
            N V+
Sbjct: 279 INYVN 283


>gi|262274652|ref|ZP_06052463.1| extracellular solute-binding protein family 3 [Grimontia hollisae
           CIP 101886]
 gi|262221215|gb|EEY72529.1| extracellular solute-binding protein family 3 [Grimontia hollisae
           CIP 101886]
          Length = 254

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 18/249 (7%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   ++  ++     F     +G   GF+VD   A+     +      ++       
Sbjct: 20  QAKEWKDVRIAVDVPYEPFEYKAPDGTLTGFEVDLGNAVCE---NAKLNCSWVVQAWDGI 76

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGA 146
              LQ+++ D++  +   T  R     + F    Y    GF   K  G++   V  L G 
Sbjct: 77  IPGLQARKYDVIFSSMSVTEERAK--QVLFSEPYYNTPSGFFAPKGSGLNPADVDSLKGK 134

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I VQ GT  +    D +           +   +++    +  R D    D     +  L
Sbjct: 135 RIGVQRGTVQDNHATDTY---GKVAEVKRYTTSDDLVLDLQGGRLDIVLLDFPVGESAIL 191

Query: 207 TNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
                    +  D +   + +A A  + D     I +    A V A+         +++ 
Sbjct: 192 AGKDGDRFEVAGDNVQLGNGIAAAFRKRDKALAAIFNKAL-AEVKAD------GTYDEIR 244

Query: 266 KDTTNPDVQ 274
           K     D++
Sbjct: 245 KKYFAYDIK 253


>gi|237741766|ref|ZP_04572247.1| amino acid-binding protein [Fusobacterium sp. 4_1_13]
 gi|229429414|gb|EEO39626.1| amino acid-binding protein [Fusobacterium sp. 4_1_13]
          Length = 236

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 84/257 (32%), Gaps = 31/257 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       ++ + +                 K   +  G N     F  ++ +    GFD
Sbjct: 1   MLMSLLSVVISVSVFA---------------KSNVIYVGTNAEFAPFEYLEKD-KIVGFD 44

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K++D++      T  R+    +AF  
Sbjct: 45  IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKVDMVIAGMSATPERQK--AVAFSK 99

Query: 121 ITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +   Q  I    K K + S   LSG  + V  G T +  +++             F  
Sbjct: 100 PYFKAKQVVITTPEKAKSLKSFKDLSGKKVGVMLGFTGDTVVSEI-----KGVKVERFNA 154

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 A   ++ DA   D     A K T +   + VI      +   A A  + D E  
Sbjct: 155 AYAAILALSQNKVDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELI 211

Query: 239 NIVSWTHYAMVTAEELG 255
           N V+     + +  E  
Sbjct: 212 NKVNAALDKIKSNGEYD 228


>gi|209516391|ref|ZP_03265247.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209503153|gb|EEA03153.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 275

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 69/230 (30%), Gaps = 10/230 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L +   +  +     L  +KK G L  G       F  +  NG   GF+ D    + 
Sbjct: 11  LVMLTLCAASLAAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEIG 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             I      ++++ L        L++ + D++      T  R       +          
Sbjct: 70  KEIGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPVADATDA 124

Query: 129 FIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +       I   + ++G ++    G+     L  Y      +     +    +  A   
Sbjct: 125 LLRRANDTSIKQSADIAGKTVGAGKGSAQLDQLKSYAATLPKQPEVREYVDNNQAYADLA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
           A R  A    ++ +    +   RP    ++          A A+ +    
Sbjct: 185 AGRITAVANSMTNIA--YVAKQRPEMFAVVQPPFGAKVYFAYALRKDADS 232


>gi|217972162|ref|YP_002356913.1| family 3 extracellular solute-binding protein [Shewanella baltica
           OS223]
 gi|217497297|gb|ACK45490.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS223]
          Length = 250

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 71/231 (30%), Gaps = 24/231 (10%)

Query: 31  KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K    L  G N     F  V      + KGFD+D  + ++         ++   +     
Sbjct: 23  KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-------MHKKKGISSVS 141
            +AL S +ID ++     T  R+    + F    Y   Q  +             I+++ 
Sbjct: 80  IVALNSGKIDFIASGMTITAERQA--NVNFSEPYYEATQVVLVNKDNKDNKDNNSINTLE 137

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G    VQ GTT +        +     +   F    E     +  + D    D    
Sbjct: 138 DIKGKHFAVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNSKVDLVLFDSEPA 191

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                 N    E  ++           A+ +   E    ++ T  A + A+
Sbjct: 192 ANYLAKNP---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 238


>gi|23098015|ref|NP_691481.1| ABC transporter [Oceanobacillus iheyensis HTE831]
 gi|22776239|dbj|BAC12516.1| ABC transporter [Oceanobacillus iheyensis HTE831]
          Length = 288

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 14/215 (6%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    V IL   ++F  +  +++  L D++  G ++ G       +A    NG+  G 
Sbjct: 1   MKKKLITVLILSATLVFLAACGSDSGSLEDLQDGGTVQVG-FANEAPYAYEDDNGELTGA 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD   A+ + +  D   ++    + +E    +Q+ Q D ++         +      F 
Sbjct: 60  SVDIATAVFAELGID--DVEGKLSDWQELIPGVQAGQFDAITAGMAI--RPDRCENALFS 115

Query: 120 PITYFDGQGFIMHKKKG-----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             T   G+G ++             ++      + V  G T    L +            
Sbjct: 116 EPTMQYGEGLVVTAGNPHGLESYQDIADNPDVKVVVMEGATEIGYLEEM---GVDPSQIE 172

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
               +    AA ++ R DA TG    +        
Sbjct: 173 TAADIPATLAAVQSGRVDATTGTEMTVRMAYDNAQ 207


>gi|53725953|ref|YP_103704.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
 gi|52429376|gb|AAU49969.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia mallei ATCC 23344]
          Length = 264

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 15/223 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDV   + +++ +   P   Q++   
Sbjct: 28  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDV--AKEVAARLGVKP---QFVTTE 82

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142
                  LQ+ + D++      T  R     L F     +     I          +   
Sbjct: 83  WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 140

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  GT      AD  K          +    E      A R D    D   L 
Sbjct: 141 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 195

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L      P           ++ +     +G+ ++   +    
Sbjct: 196 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 237


>gi|293400689|ref|ZP_06644834.1| amino acid ABC transporter, permease/substrate-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305715|gb|EFE46959.1| amino acid ABC transporter, permease/substrate-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 510

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 92/322 (28%), Gaps = 38/322 (11%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGF 47
           M K       F+ +  L   F        S         L  I +RG L  G +      
Sbjct: 3   MKKFTKISTLFILLSVLCGSFLIQIQAKESTNANGEGELLDKIMERGELIVGTSPDFPPN 62

Query: 48  AEVK----ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
             +         + G D+DF R ++  +      +    ++      +L + QID+    
Sbjct: 63  EFIDTTKTGQDQYVGSDMDFARYIADEMGVK---LTIKAMDFDAVLASLGNGQIDMAITG 119

Query: 104 TDWTLLREISLGLAFRPITYF---DGQGFIMH--KKKGISSVSQLSGASICVQAGTTTEL 158
              T  R  ++ ++            QG ++   KK   + +    G  + VQAG+  + 
Sbjct: 120 ITKTPERMDAMEMSESYYDENGESSWQGLLIKADKKDVYTKLRDFKGKKVAVQAGSLQDY 179

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +    K  N          + +     +    DA              N+       L 
Sbjct: 180 YVKTQLKEAN----IQYITGLNDGINLLKNGSVDAVACAYGTGQDFAKQNEGIHMSKQLL 235

Query: 219 DIISKSPLAP--AIIQGDTEWYNIVSWTHYAMVTA---EELGITQKNINQVSKD----TT 269
             ++   +     I +G+    N  +     +      EE      N ++   +      
Sbjct: 236 FKLNPDYMGTRVGIPKGEIALLNKTNEIIQQVRDKGLYEEWYQAAVNYDKQKIEGNFLQR 295

Query: 270 NPDVQRFLGIDKSSNIGEALGL 291
              +           +G  LGL
Sbjct: 296 TWKIAVRYWPMFLEGLGMTLGL 317


>gi|282849424|ref|ZP_06258809.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella parvula ATCC 17745]
 gi|282581128|gb|EFB86526.1| bacterial extracellular solute-binding protein, family 3
           [Veillonella parvula ATCC 17745]
          Length = 279

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 8/245 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K F +  L L +L       + S    +      +       +  ++    NG+  GFDV
Sbjct: 9   KLFAIGALALGVLVVAGCGDDTSKEAKVNPDAKVINVATRGTVRPYSYTDDNGNLTGFDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +     +      + P+     F+A+ + Q+D+++        RE          
Sbjct: 69  ELLKEIERR--NPDLHFNFKPMAVDAAFVAMDAGQVDMIANQMRRNPTREAKYYYTNEVN 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV-E 180
            Y   +  + + +  IS +  L G  I V   +     +  + +  N +   I  ++   
Sbjct: 127 NYSTRKLVVKNDRNDISKLDDLKGKKIAVTTSSEFNELVKQFNETANPQIEVIYTDKAGA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        R DA               DR      + D+++  P     +   T+    
Sbjct: 187 ETLNLVATGRADA--AGEYEYVINSAIKDRGLPLKAVGDVLAVVP--TYFLSKRTDDMKQ 242

Query: 241 VSWTH 245
           V+   
Sbjct: 243 VNEKI 247


>gi|59713574|ref|YP_206349.1| ABC transporter amino acid-binding protein [Vibrio fischeri ES114]
 gi|59481822|gb|AAW87461.1| ABC transporter amino acid-binding protein [Vibrio fischeri ES114]
          Length = 269

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 14/224 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I++RG LK G++T  V +A     G+  GF+VD  + L++       K++++P    
Sbjct: 31  LDKIQERGTLKVGLST-FVPWAMRNQQGELIGFEVDVAKRLAADSG---LKVEFIPTAWD 86

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQL 143
               +L S + D++      T  R  S  + F       G     +K+            
Sbjct: 87  GIIPSLISGKFDVIIGGLTITDER--SKSVLFTVPYSHSGVQVAANKELTDGFTREDFNS 144

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
                  + G+ T   + ++F         + F+   +           A          
Sbjct: 145 RRVKFAARRGSITVAAIKEHFPKAK----VLQFDDEAQAFQEVLNGNAHAVAASTPKPEF 200

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
             L +     ++   + +S+   A A+  G+ +          A
Sbjct: 201 DTLKHAD-ILYLPFKERLSQGNEAFAVRLGEEDKKAYFDEWIKA 243


>gi|327194081|gb|EGE60955.1| extracellular solute-binding protein family 3 [Rhizobium etli
           CNPAF512]
          Length = 258

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 20/209 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M     + +   + L  ++ + +A           ++ GI N     F    A+G W G+
Sbjct: 1   MNVKTAIYLAAGVALLVSAVAAHA----------EVRFGIMNEAYPPFFAKDASGKWVGW 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD   A+ + +         + ++       LQSK+ D++  +   T  RE ++   F 
Sbjct: 51  EVDMMNAVCAEM---KESCSIVDMSWDGLIPGLQSKKFDVIWSSMSITDEREKTIA--FT 105

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  +     ++V+ +SG +I +Q  T        Y+           +  
Sbjct: 106 DKYYNTPSKLIGAEGAKPGTTVADVSGKTIGIQVSTIQSDYYKKYYAGA---ASEKTYAT 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLT 207
           ++E        R D   GD   L A   +
Sbjct: 163 LDEAFQDLAVGRIDYVFGDSIPLMAFIHS 191


>gi|229816477|ref|ZP_04446777.1| hypothetical protein COLINT_03530 [Collinsella intestinalis DSM
           13280]
 gi|229807944|gb|EEP43746.1| hypothetical protein COLINT_03530 [Collinsella intestinalis DSM
           13280]
          Length = 329

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 9/229 (3%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67
           ++    +   +   ++     IK  G ++ G+    + F+ +   +G  +GFD    + L
Sbjct: 65  LIASGAVADDATIASSEWAQKIKDAGTMRLGVVQTSMLFSLLNEKDGKLRGFDAGLSQLL 124

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              I  D SK +   + +  R   LQ+ Q+D +      T  R+  +  A  P       
Sbjct: 125 VRYILGDESKFEATQVTSDTRESVLQNDQVDAVFATYSITEDRKKLISFA-GPYYGTQQS 183

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             ++     I+SV  L+G ++  Q+G+T    + +             F+  EE  +A  
Sbjct: 184 ILVLADNDDIASVDDLAGKNVAAQSGSTGPSIMEEVCP----DAKLQEFKTDEEARSALA 239

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235
             R DAY  D + L++      +P ++ +  +           +     
Sbjct: 240 QGRVDAYVIDRNMLFSD--MMKQPGKYKMAGEPFGPEDLYGIGLPLDSD 286


>gi|306821310|ref|ZP_07454920.1| polar amino acid ABC superfamily ATP binding cassette transporter
           amino acid-binding protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550651|gb|EFM38632.1| polar amino acid ABC superfamily ATP binding cassette transporter
           amino acid-binding protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 300

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 90/286 (31%), Gaps = 52/286 (18%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----------------------------------- 25
           M K  F+  L +  +F  S    +                                    
Sbjct: 1   MKKKLFLLALVIFSVFAFSACGGSDNAKENANTNQQQTADNKKDDKTASDNKSSENVPSG 60

Query: 26  -ILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             +  IK++G L  G       +          +  GFD++  + ++  +  +   ++  
Sbjct: 61  ASIDKIKEKGKLVIGTTADYPPYEFKVMQNGKLEIVGFDIEIAKLIAKKLGVE---LEIK 117

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
            ++ K    A++  +IDI     + T  R+  +G+    + Y   Q  ++ K+     +S
Sbjct: 118 DMDFKLLIEAVKKGEIDIALAGINPTEERKKEIGM--TNVYYKANQTVLIRKEDEGVFTS 175

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  L G ++  Q G T          A            +  + A  +  + DA   + +
Sbjct: 176 LDTLKGKTLGAQMGATQVELAKTVENA-----QIKELPLITALIADLKTKKIDAIVLEEA 230

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                  TND       L +   K   A  +   +T+    ++ T 
Sbjct: 231 VAKQYASTNDDLLVPNFLFESNDKGS-AAGVKLENTDLLEFLNTTL 275


>gi|256377616|ref|YP_003101276.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255921919|gb|ACU37430.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 328

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 95/280 (33%), Gaps = 30/280 (10%)

Query: 23  NASILGDIKK----RGF--LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
            A  + D+K+    +G   L  GI T + G        G + GFDVD  R +++ +    
Sbjct: 49  EAPTVDDLKQQAGLKGKQELVVGIKTDMPGIGLRDPATGAYSGFDVDIARMIAADLGFQA 108

Query: 76  SKIQYLPLNAKERFLALQSKQ--IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132
           S ++++ +  ++R     +    +D++      T  RE   G+AF        Q  I   
Sbjct: 109 SDVRFVEIQNEDRSRMRGANGVLVDLVIATYSITDRREGMRGVAFSSPYLETEQSVITRE 168

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
             + I   +QL G  +C  + +T+   ++      +   +        +      A   +
Sbjct: 169 DHEPIREAAQLRGKKVCTLSTSTSTDAVSAAGADMDNSNNI------SDCVDRLLAGEVE 222

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A T D   L      +     H  +     +  L       +     +V+ +        
Sbjct: 223 AVTTDAVILAGFVSAHPDELAHHDIALETPE--LWAVNTGDNAALLTLVNLSL------- 273

Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
                +++    +        +R L      N GEAL L 
Sbjct: 274 -----RRSACDPADQRWEEAFERHLRPMLEHNPGEALPLD 308


>gi|319939787|ref|ZP_08014143.1| ABC transporter substrate-binding protein-amino acid transporter
           [Streptococcus anginosus 1_2_62CV]
 gi|319811000|gb|EFW07315.1| ABC transporter substrate-binding protein-amino acid transporter
           [Streptococcus anginosus 1_2_62CV]
          Length = 274

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 80/252 (31%), Gaps = 12/252 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M K    S L  +           S        G   +K   N     F   + NG   G
Sbjct: 1   MKKVLKYSSLAALGFLTIGALAACSNSKSTTSSGKTEIKVATNASPKPFNY-EENGKLTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           ++++  RA+      D  K+++        F  L S +  +   N  +T  R       +
Sbjct: 60  YEIEVVRAIFKD--SDKYKVKFETTEWSGIFAGLDSDRYQMAVNNISYTKERAG--KYLY 115

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              T  +    ++ K    I S+  + G +  V  GTTT   L  Y +AH      I + 
Sbjct: 116 AAPTAKNPNVLVVKKSDKTIQSLDDIGGKTTEVVQGTTTAAQLEKYNQAHANNPTKISYT 175

Query: 178 --RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
               ++I       + D    D        + N +     ++    ++ P     + +G 
Sbjct: 176 KADFQQIMNHLNDGKFDYKIFDK-IGVETVIKNQKLDHLKVIDLPSNQQPYVYPLLAKGQ 234

Query: 235 TEWYNIVSWTHY 246
            E    V+    
Sbjct: 235 DELKTFVNKRIQ 246


>gi|312899026|ref|ZP_07758413.1| putative glutamine ABC transporter periplasmic protein [Megasphaera
           micronuciformis F0359]
 gi|310619933|gb|EFQ03506.1| putative glutamine ABC transporter periplasmic protein [Megasphaera
           micronuciformis F0359]
          Length = 257

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 64/214 (29%), Gaps = 14/214 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L  G       F     N    GFD+D  +A+   +           +       ALQ
Sbjct: 35  KTLVVGTEPTFPPFEFT-ENEKDVGFDIDLAQAICDKLGYKMEV---KNMGFDALIPALQ 90

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
           S QID+++   D T  R     + F  + +  G   ++ K     +    LSG ++  Q 
Sbjct: 91  SGQIDLIAAGMDATPER--QEKVNFTDVYFKGGYSVVVRKDNTDITGFDSLSGKTVGAQV 148

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+       +             F+   +      A   DA   D +             
Sbjct: 149 GSKPVEIAQE------HGATVKQFDTNTQGWMELEAGTIDAVAIDQAVALYYLQQGGNAK 202

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +  + I    +A A  +  T+    ++    
Sbjct: 203 -LKLAGEPILSRGVAMATAKDKTDLTQQINKALQ 235


>gi|271962801|ref|YP_003336997.1| serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270505976|gb|ACZ84254.1| Serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 751

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 81/230 (35%), Gaps = 11/230 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             ++ +T AS+     K G L  G+   L G A + + G W GF+VD    ++ A+    
Sbjct: 497 TGSAPATFASVADKAAKTGRLTVGMRDFLPGVA-LNSGGRWSGFEVDLATEIAKALGVPA 555

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S + +   + +ER   L S  +D++          +    + F    Y      ++    
Sbjct: 556 SGVTFRATSREERPGLLASGDLDLVVSTYSINDKDD----VTFAGPYYLAHVDVLVKDGS 611

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I S + L G  +C  AG+ +   L         +   +  +          A   DA  
Sbjct: 612 PIVSAAGLEGKRVCQPAGSGSVRALQGEVD----RLVLVPADTYTGCMNKLLAGEVDAVP 667

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           GD   L      N     + ++   ++    A A+ +GD      V    
Sbjct: 668 GDDLVLAG--FGNRESIGYKVVGLKLTDERYAVAMKKGDRRTCKAVQGVI 715


>gi|254779538|ref|YP_003057644.1| ABC-type transport system, periplasmic binding protein; putative
           signal peptide [Helicobacter pylori B38]
 gi|254001450|emb|CAX29450.1| ABC-type transport system, periplasmic binding protein; putative
           signal peptide [Helicobacter pylori B38]
          Length = 253

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 74/249 (29%), Gaps = 16/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L+I FF  F   + +   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFL----LVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 57  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              + G   ++ K +    +  + G        +T          A       +  + + 
Sbjct: 113 PYSYSGTIMLVRKDEN--RIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSMA 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +        R D       A+     T+      +           +  I +   +   +
Sbjct: 165 QALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALEL 224

Query: 241 VSWTHYAMV 249
           ++     ++
Sbjct: 225 INQAMQRLI 233


>gi|163742412|ref|ZP_02149799.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Phaeobacter gallaeciensis
           2.10]
 gi|161384362|gb|EDQ08744.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Phaeobacter gallaeciensis
           2.10]
          Length = 257

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 85/222 (38%), Gaps = 17/222 (7%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K G+       FA + ++G W G+++D   A+ +A   D       P+       +L  
Sbjct: 27  VKIGVAAEPYPPFASLDSSGQWVGWEIDVINAVCAAAELD---CVITPVAWDGIIPSLTG 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           +Q+D +  +   T  R  +  + F    Y      +  K   I  +   L+G  + +QA 
Sbjct: 84  QQVDAIMASMSITEERLKT--IDFSDPYYNTPAVIVADKSMDIEATPESLAGKVVGIQAS 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +    ++FK         V++  +E +    A R DA T   S   A  + +D    
Sbjct: 142 TIHQAYAQEHFK----DSELRVYQTQDEANQDLFAGRIDA-TQADSIAMADFVGSDAGGC 196

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
             I   + +   +        + +GD++    ++    A++ 
Sbjct: 197 CEIKGAVANDEAILGKGVGAGVRKGDSDVLAALNRGIAAILA 238


>gi|160934031|ref|ZP_02081418.1| hypothetical protein CLOLEP_02893 [Clostridium leptum DSM 753]
 gi|156866704|gb|EDO60076.1| hypothetical protein CLOLEP_02893 [Clostridium leptum DSM 753]
          Length = 256

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 98/273 (35%), Gaps = 20/273 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++   ++    +    +S        G L      G   +          G D
Sbjct: 3   MKKILAAAMAAALLTGTLAMGGCSS------DSGKLVMVTEAGFAPYEYYDGE-AVVGVD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +++A+  +   ++   +        +QS + D  +     T  RE    + F  
Sbjct: 56  VDIAKEIAAAMGKE---LEVRDIAFDSLINEVQSGKADFAAAGLSVTPEREE--QVDFTI 110

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 Q  ++ +    I+    ++G ++ VQ GT  +  ++D  K        I  ++ 
Sbjct: 111 NYATSKQVIVVRQDNTEITGPDDVNGKTVSVQLGTVADTAVSD--KEDYPDCTVIQQKKY 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                  ++ + D    D   L A +L    P E  IL + +     + A+ +G+TE  +
Sbjct: 169 LAAAEDVKSGKADCLVMDE--LPAQELVKANP-ELKILDEELFTDVYSMAVQKGNTELLD 225

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
            ++     ++  +E  I +  +N ++      +
Sbjct: 226 KINEVLQKLM--DEGKIEEFTMNHIAASGEAAE 256


>gi|16077407|ref|NP_388220.1| ABC transporter binding lipoprotein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221308150|ref|ZP_03589997.1| hypothetical protein Bsubs1_01888 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312475|ref|ZP_03594280.1| hypothetical protein BsubsN3_01896 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317408|ref|ZP_03598702.1| hypothetical protein BsubsJ_01883 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|7676174|sp|P42400|YCKB_BACSU RecName: Full=Probable ABC transporter extracellular-binding
           protein yckB; AltName: Full=ORF2; Flags: Precursor
 gi|2632624|emb|CAB12132.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 287

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 70/262 (26%), Gaps = 21/262 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSF-----STNASI-LGDIKKRGFLKCGINTGLVGFAE 49
           M      K    S      L   +      + +       IK +G +    +  L   + 
Sbjct: 1   MKSFMHSKAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSY 60

Query: 50  VKAN---GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +       G++V+  R  +  +     K+++  +       A+ S Q+D  + + D 
Sbjct: 61  HDTDSGSDKLTGYEVEVVREAAKRLG---LKVEFKEMGIDGMLTAVNSGQVDAAANDIDV 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  RE     +      +           GI ++  L G      A T       +  + 
Sbjct: 118 TKDREEKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTVYM----EVARK 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +  K         E+        R D    D              +  +        +  
Sbjct: 174 YGAKEVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQ 233

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
           A  + + +      ++     M
Sbjct: 234 ALVMKKSNAALQKKMNEALKEM 255


>gi|323142249|ref|ZP_08077083.1| ABC transporter, substrate-binding protein, family 3
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413312|gb|EFY04197.1| ABC transporter, substrate-binding protein, family 3
           [Phascolarctobacterium sp. YIT 12067]
          Length = 278

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 85/278 (30%), Gaps = 12/278 (4%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58
           M   F F++   L ++             D  K       IN+    F  VK     ++G
Sbjct: 6   MKSIFAFLATAMLAMMLVGCGGEKKDAAADAGKADKWVVAINSTFPPFESVKEGTKDYQG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D    ++  +      I++  +        LQS + D++      T  RE    ++F
Sbjct: 66  VDIDIAHYIAKKMNKK---IEFTDMKFASLVPTLQSGRADVIISAISPTSEREKV--VSF 120

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               YF  +  +  K  G  ++ +L G       GTT    L             +  + 
Sbjct: 121 SKPYYFPMKAILCKKGAGYDAMDKLKGKKAGASMGTTYAKELKAV-----GGIEVVEMDT 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +    +  R  A   D S        N     HV+   ++     A A+ +   +  
Sbjct: 176 TPLVVQDIKNGRLAAGLFDSSQAAVFVKQNPDLELHVLQGAVVKDDTFAIALPKDSKDVE 235

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
            I           E   I   ++ +         +++ 
Sbjct: 236 KINEILKEMRTNGELHKILVAHLGEEGTKEYEAAIEKL 273


>gi|238759067|ref|ZP_04620237.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia aldovae ATCC 35236]
 gi|238702744|gb|EEP95291.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia aldovae ATCC 35236]
          Length = 260

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 98/279 (35%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  FV  L L++    + S  A+I  D+K       G +     F    A+G+  GFD
Sbjct: 1   MNKKMFV--LPLVLALAAASSAFAAIPKDVK------IGTDPTYAPFESKNASGELVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + L   I    +K  ++  +      +L++K+ID +  +   T  R+  +   F  
Sbjct: 53  IDIAKELCKRI---DTKCTFVESDFDALIPSLKAKKIDAIISSLSITEKRQKEIA--FTD 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      I  +   +  ++  L G  + V  G+T E      ++   +    + ++  
Sbjct: 108 KLFAANSRLIATQGSKVEPTLVALKGKRVGVLQGSTQEAYANAEWQPKGID--VVAYQNQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           + I A   + R DA   D  A     L       +      +             + + D
Sbjct: 166 DLIYADLASGRIDAAFQDEVAASEGFLKQAAGKGYAFAGPSVKNDEFFGVGTGMGLRKDD 225

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            E          A+  A          ++++K   + DV
Sbjct: 226 VELKA-------ALDKAFAEMRKDGTYDKLAKKYFDFDV 257


>gi|167748838|ref|ZP_02420965.1| hypothetical protein ANACAC_03612 [Anaerostipes caccae DSM 14662]
 gi|167651808|gb|EDR95937.1| hypothetical protein ANACAC_03612 [Anaerostipes caccae DSM 14662]
          Length = 283

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 81/255 (31%), Gaps = 27/255 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKR---GFLKCGINTG 43
           M K   + ++  ++      +                     ++K       L  G++ G
Sbjct: 6   MKKLLLICMMICLVFCLGGCNFPWDKEKTGDKNVRKENITASEVKDSMKGKQLIIGVSDG 65

Query: 44  LVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           +  F+         KGFD+D  + +S  +  +    +      +E    L+ K+ID+   
Sbjct: 66  MAPFSVRDEKTKEMKGFDIDLIKGISEYLGFEY---KLRVAPMRELTDLLREKKIDLAIS 122

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R+      F  + + +    +++  K I+   +L G +I V+ GT+       
Sbjct: 123 GICITDSRQKEFQ--FSDVYFENTLKVMVNTDKNITDRKELEGKTIGVEEGTSNAEYAQT 180

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                N      V+  ++++       + DA   D + +              +   + S
Sbjct: 181 NLSEEN---KIKVYPSMDKVFKDLEKGKIDATVYDATGVDYFMANYKGDKISALDEKLNS 237

Query: 223 KSP-LAPAIIQGDTE 236
                     + D  
Sbjct: 238 AESNYGIMFRKKDPS 252


>gi|227509453|ref|ZP_03939502.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227512150|ref|ZP_03942199.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227084544|gb|EEI19856.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227191165|gb|EEI71232.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 488

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 87/262 (33%), Gaps = 29/262 (11%)

Query: 1   MYKD--------FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K          FV++L +  +   S S   + L  +K+RG L    +     +     
Sbjct: 1   MKKLKAIIQMMLVFVTLLTVSAIQTNSASAADNSLQRVKQRGELIMVTSPDYPPYEFQVN 60

Query: 53  NG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            G      G D+D  + ++  +      +    +N     +A+Q+ + D+     + T  
Sbjct: 61  KGGKSRIVGMDIDVAKKVAKDLGVK---LVIKSMNFDSLLVAIQTGKADMAIGGINPTNE 117

Query: 110 REISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R     + F  I Y  GQ F++         SV  L G  I  Q GT             
Sbjct: 118 R--RQSVDFSDIYYSGGQSFLINSKDVNKYKSVKNLRGGKIGAQTGTLQYGLAKKRIP-- 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL- 226
                    ++  ++  A + ++ DA   +  +  A            ++P     +   
Sbjct: 174 --GATVKGMDKSTDLVLALKTNKIDALGIEKPSAEAYV---KNDPSLKMIPSGYHLNKND 228

Query: 227 ---APAIIQGDTEWYNIVSWTH 245
              A A  +G T   N V+ + 
Sbjct: 229 IGAAIAFKKGSTSLVNAVNKSI 250


>gi|303255137|ref|ZP_07341213.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS455]
 gi|302597967|gb|EFL65037.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS455]
          Length = 276

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 12/253 (4%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G    +  +    N+    F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGQAASKKEIIVATNSSPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVNNISYTKERAEKYLY 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           A  P         +      I S+  + G S  V  GTT+   L DY K H+     + +
Sbjct: 118 A-APTVKDPNVLVVKKDNSSIKSLDDVGGKSTEVVQGTTSAKQLEDYNKQHSDNPTILNY 176

Query: 177 ERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQG 233
            +    +I       + D    D        + N       ++     + P     + +G
Sbjct: 177 TKANLQQIMGHLSDGQFDYKIFDK-ITVETVIKNQGLDNLKVIDLPSDQQPYVYPLLAKG 235

Query: 234 DTEWYNIVSWTHY 246
             E    V     
Sbjct: 236 QDELKTFVDKRIQ 248


>gi|326334176|ref|ZP_08200399.1| putative amino acid ABC transporter [Nocardioidaceae bacterium
           Broad-1]
 gi|325947967|gb|EGD40084.1| putative amino acid ABC transporter [Nocardioidaceae bacterium
           Broad-1]
          Length = 272

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 18/259 (6%)

Query: 2   YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K      L L+ +          +  A+        G L+ G++      A  K +G  
Sbjct: 4   IKLVVAGALALLGVLVIGGYFADPAPKATEQESAAAGGTLRIGVDGTEP--AYYKVDGVT 61

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KGFD +    ++  +   P    ++ +   + F AL++ +ID++      T  R+     
Sbjct: 62  KGFDYEMALGVAEGMGAKPE---FVVMEFSDLFTALEAGEIDMIGAQVTETAERK--QDF 116

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +     F+  +   I + + + G +I V  GT  E  L + ++      + I  
Sbjct: 117 DFTAPYFVTYLSFLTPEDSTIKTRADIDGKNIAVVEGTIHERYLDEQYE----NVNVIKA 172

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +  +    A +  + DA+  D      +     DR      +      +P+   + +GD 
Sbjct: 173 KDEDTAIKAIQDGKADAFFYDAPYTTPIIARWQDRFPLKEAIVYPADDAPIGFVMQKGDG 232

Query: 236 EWYNIVSWTHYAMVTAEEL 254
              + V      M+   E 
Sbjct: 233 R-KDQVDEVLEQMILDGEW 250


>gi|255322518|ref|ZP_05363663.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
           [Campylobacter showae RM3277]
 gi|255300426|gb|EET79698.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
           [Campylobacter showae RM3277]
          Length = 238

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 13/201 (6%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K G       F  V       GFD+D    L+     +    + + ++      AL++ +
Sbjct: 21  KIGTAANYPPFEYVDEQNKITGFDMDLVAELAKRAGFEY---KIVNMSFDGLIPALKTGK 77

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTT 155
           ID ++     T   +    + F    Y     ++  K    ++S   L+G  + VQ GT 
Sbjct: 78  IDAVASAMSATD--DRRKSVDFTQAYYATENIYLRAKGNDALASKEALNGKRVGVQQGTV 135

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E+       A       +  E    +    +  + DA   D S  Y        P    
Sbjct: 136 QEIAANAIAGAK-----VVPAEDPVPLIMGLKKGKIDAVVLDSSIGYGFL--KKNPELEE 188

Query: 216 ILPDIISKSPLAPAIIQGDTE 236
              +       + A  +    
Sbjct: 189 FFKENDGSEGFSIAFDKDKQA 209


>gi|319651743|ref|ZP_08005869.1| amino acid ABC transporter substrate-binding protein [Bacillus sp.
           2_A_57_CT2]
 gi|317396562|gb|EFV77274.1| amino acid ABC transporter substrate-binding protein [Bacillus sp.
           2_A_57_CT2]
          Length = 261

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 16/224 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            + S +  +          +     F+    +G   GFD+D   A++  +  +P + ++ 
Sbjct: 26  ASKSGMDLVND-DKFTYAASGEFKPFSYTNDDGSMSGFDIDVAEAVAKELGLEPVQNKFK 84

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                     ++S + D    +   T  R     + F    Y+ G    +     + +++
Sbjct: 85  ---FGGIVEGVKSGRFDAAVASHTITEER--LKAVNFSTPYYYSGPQIYVRPDSSVETLA 139

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  I V  G+T      +         +   ++       A    + DA   D    
Sbjct: 140 DLKGMEIAVSKGSTYTSNAEE------ATDNIQFYDSDVVALEALSKGKHDAVITDFVTG 193

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                        +   +++ +S  A A+ + + E    V+   
Sbjct: 194 KEAI----GAGMKIEGKELLGRSEQAIAVAKDNKELLEKVNEAL 233


>gi|303259210|ref|ZP_07345188.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303260966|ref|ZP_07346915.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303263293|ref|ZP_07349216.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS397]
 gi|303265458|ref|ZP_07351358.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS457]
 gi|303267984|ref|ZP_07353786.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS458]
 gi|301801110|emb|CBW33782.1| ABC transporter, substrate binding protein [Streptococcus
           pneumoniae INV200]
 gi|302637803|gb|EFL68289.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302639628|gb|EFL70085.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302642680|gb|EFL73025.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS458]
 gi|302644898|gb|EFL75145.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS457]
 gi|302647066|gb|EFL77290.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae BS397]
 gi|332077463|gb|EGI87924.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA41301]
          Length = 276

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 12/253 (4%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G    +  +    N+    F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGQAASKKEIIVATNSSPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVNNISYTKERAEKYLY 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           A  P         +      I S+  + G S  V  GTT+   L DY K H+     + +
Sbjct: 118 A-APTVKDPNVLVVKKDDSSIKSLDDVGGKSTEVVQGTTSAKQLEDYNKQHSDNPTILNY 176

Query: 177 ERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQG 233
            +    +I       + D    D        + N       ++     + P     + +G
Sbjct: 177 TKANLQQIMGHLSDGQFDYKIFDK-ITVETVIKNQGLDNLKVIDLPSDQQPYVYPLLAKG 235

Query: 234 DTEWYNIVSWTHY 246
             E    V     
Sbjct: 236 QDELKTFVDKRIQ 248


>gi|297243837|ref|ZP_06927767.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis AMD]
 gi|296888258|gb|EFH27000.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis AMD]
          Length = 298

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 15/228 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A +  ++ K G L  G+N          A+G    G+++DF +AL+  +       +
Sbjct: 45  AVAALVPAEVAKTGELTVGVNVSYAPAEFFAADGKTPVGYEIDFSKALAKVMGLKA---K 101

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS- 138
            +         A+ S + ++          R     + F       G  F + K      
Sbjct: 102 IMHAQFDSIIPAIGS-KYNVGISGFTVNAER--MKSVDFI-TYANAGLSFEVRKGNPTKV 157

Query: 139 SVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
               L G  + ++ GT  E  + +         N     + F+   +   A  + R D  
Sbjct: 158 DPKNLCGKKVTLETGTVGEPIMEEAKKQCAAKGNKPLEIMSFKEQTDATTALLSGRADVM 217

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             D     A   +   P +  IL +     P+  A+ +GD      V 
Sbjct: 218 YADTP--VAGYASIKNPGKLEILENSKDSEPMGAAVKKGDAAMLKAVK 263


>gi|291298387|ref|YP_003509665.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
 gi|290567607|gb|ADD40572.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
          Length = 257

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 74/241 (30%), Gaps = 16/241 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFC 64
           ++ +   +      +  +S       +  L    +     F    +  +    GFDVD  
Sbjct: 11  LTAIGTALTLTLGLAACSS-------QDTLTVCTSIPYEPFQFKDSWQDNKVVGFDVDIM 63

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             ++  +      +        +   AL+    D+ +     T  RE  +  +F    Y 
Sbjct: 64  DLVAKELDLKQEIVDIGF-EQIDSGQALEEGTCDVAAAALTITPPREEVM--SFSDPYYD 120

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
             Q         I ++  + G  + VQ  +T      +       +Y    +  + ++  
Sbjct: 121 AKQALGAKPGSKIKTLKDMKGKVLGVQRDSTGFAYADEN--QDKYEYDLKTYNDLGKLRE 178

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A    + DA   D+    +     D   +  I+    +      A+ + + E  + ++  
Sbjct: 179 AVLYDQVDAAINDVPLWTSKVT--DDQRKLEIIEKYDTGEEYGYAVAKDNDELLSTINEV 236

Query: 245 H 245
            
Sbjct: 237 L 237


>gi|298717120|ref|YP_003729762.1| ABC transport system periplasmic ligand binding protein [Pantoea
           vagans C9-1]
 gi|298361309|gb|ADI78090.1| putative ABC transport system, periplasmic ligand binding protein
           [Pantoea vagans C9-1]
          Length = 282

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 73/274 (26%), Gaps = 40/274 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + L + +L  ++FS         K  G LK         F +   +G   G++
Sbjct: 3   MRNRLLKASLTVALLATSAFSQA-------KDFGTLKFATEAAYPPFNQTTPSGKIVGYE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L+         I             L   + D +      T  R     + F  
Sbjct: 56  PDMVAELAKRAGFKYEIIA---QKWSGMIPGLIDGKYDAVIDAVTVTPKRAE--AIDFTH 110

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                   F+  KK  ++++                           G +I VQ  T   
Sbjct: 111 QYTVSVSSFVTAKKSPLATLPGSGTVVTADDDAGMKKAIDDLKTTFKGKTIAVQVATIQA 170

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L  Y            ++   E  A     R DA     + L A    +         
Sbjct: 171 DFLQKYL---GDVATIRTYQAGPETFADLMNGRVDAVMASRTNLNAFVKKHSDAISSSGY 227

Query: 218 PDIISKSPLAPAI--IQGDTEWYNIVSWTHYAMV 249
                      AI   +G++E   +++    +M+
Sbjct: 228 GFSGGVLGAGSAIGLRKGNSELQQVLNQALDSMI 261


>gi|297156333|gb|ADI06045.1| putative soluble lytic transglycosylase [Streptomyces
           bingchenggensis BCW-1]
          Length = 274

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 70/225 (31%), Gaps = 15/225 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            ++L  + +RG L+         F  +    GD+ G D+D  R L+ ++   P    ++ 
Sbjct: 40  GTLLDRVPERGVLRVCTTGDYRPFTHLDPKTGDYAGIDIDMARDLAKSLDAKP---AFVA 96

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK----GIS 138
               +    L + + D+       TL R       F      DG+  ++  +        
Sbjct: 97  TTWAKLVDDLAAGRCDVAMGGVSVTLARAR--KAYFSDPYLTDGKTPVVRCEDEQKYQTL 154

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
                 G  + V  G T E     + K         V      I     A R D    D 
Sbjct: 155 EDIDQPGVRVIVNPGGTNEQFARAHIKRA----TLTVHPDNTTIFDEIIAGRADVMMTDA 210

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           S        +      V      S S  A A+ +GD E+   V  
Sbjct: 211 SETRYQAKIHPE-LCAVHPDKPFSFSEKAYALPRGDGEFKEYVDQ 254


>gi|300856062|ref|YP_003781046.1| putative ABC transporter periplasmic solute-binding component
           [Clostridium ljungdahlii DSM 13528]
 gi|300436177|gb|ADK15944.1| predicted ABC transport system, periplasmic solute-binding
           component [Clostridium ljungdahlii DSM 13528]
          Length = 288

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 86/259 (33%), Gaps = 18/259 (6%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55
           M K     + ++ +I +     ST    +   + K+   +    +   +GF     +   
Sbjct: 7   MKKIVTLLLCVVTMIAMLAGCSSTGEKNTASENKKEDKTINVATSGDYLGFTVYNESSKT 66

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           W GF++D    ++  I      ++++  +    F  L +  +D +++    T  R+    
Sbjct: 67  WSGFEIDMWNEIAKRIGYK---VKFVQEDVASAFGDLGTGHVDTVAKQISITPARKE--K 121

Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F    +F     ++      I+S   ++G +I +  G+     +      + +K    
Sbjct: 122 YDFTTPYFFSPYCLMVKGDNTNITSWKDMAGKTIGLADGSAMNEFVTKLDPNNKVKKT-- 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQ 232
            +E    I     + R DA       +  L   N        +     I          +
Sbjct: 180 TYESFSTIPQEVVSGRIDAMPYAYLLIPYLIQKNPN-WNLKAVDTAHPIYTEVNGYPFAR 238

Query: 233 GD--TEWYNIVSWTHYAMV 249
            +  T+   +V+     M+
Sbjct: 239 TERGTKLLKLVNGALNDMI 257


>gi|296111216|ref|YP_003621598.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832748|gb|ADG40629.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 477

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 86/290 (29%), Gaps = 33/290 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K + + I  L+ L     +  A+    I          +     F     N D+ G +
Sbjct: 1   MFKKYLLGISALVALLTFIPTAKAAEPHYI-------ITTDATYAPFTFQDKNNDYVGIE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   A++     +       P++       + + Q D +      T  R       F  
Sbjct: 54  QDTMAAIAKR---EGFTYTMRPMSYNSAAQLVSNGQADGIIAGMSITPER--REVYDFST 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G  +I+ K   I S++ L G ++ ++ GT            +  K     F   +
Sbjct: 109 PYYKTGVAWIVKKNSEIKSLTDLKGQTVALKTGTAASEYGKSLQSKYGFK--IKYFNDTD 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWY 238
            +          A   D+  +   +          ++      +      A+ +G  +  
Sbjct: 167 TMYNDVSVGNSAATFEDMPVI---QYAIKNGMALKVMNSDHPGNAGWYGFAVEKGKNKVL 223

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
                  +A +                  + +  V ++LG  +S+  G  
Sbjct: 224 LASFNKGFAAI--------------KKDGSYDKIVAKYLGAKQSTFSGSQ 259


>gi|73661551|ref|YP_300332.1| ABC-type amino acid transport system periplasmic component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494066|dbj|BAE17387.1| ABC-type amino acid transport system periplasmic component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 264

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 74/261 (28%), Gaps = 17/261 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +  L+++   +  T+             +      G       F+       
Sbjct: 1   MKKILLGILTLLLVVGLAACGTSDKKDNDNKNKTASENKTFVVGTEGTYAPFSYHDKQDK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D  +A++  +      +++        F  L S + ++++        R+    
Sbjct: 61  LTGYDIDVMKAVAKEMGYK---VKFKETQWDSMFAGLDSGRFNVIANQVGINDERKEKYK 117

Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F     +     +++K    I S   + G  +  Q  T+    LA    A        
Sbjct: 118 --FSEPYTYSEAVLVVNKNNKDIKSFDDVKGKKLA-QTFTSNYGKLAKSKGA-----ELT 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +     +++R +    D  +    K         +I  +            + D
Sbjct: 170 KVDGFNQAMDLLQSNRVEGTFNDNISYLDYKKQKPNADVKIIEGNAEKSQSALTFSKKED 229

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
                 V+     +    EL 
Sbjct: 230 DATIEKVNKAMKKLKDNGELA 250


>gi|293364398|ref|ZP_06611124.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|307702637|ref|ZP_07639589.1| L-cystine-binding protein tcyA [Streptococcus oralis ATCC 35037]
 gi|291317244|gb|EFE57671.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus oralis ATCC 35037]
 gi|307623753|gb|EFO02738.1| L-cystine-binding protein tcyA [Streptococcus oralis ATCC 35037]
          Length = 280

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 82/258 (31%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + S+  L ++     +  +               +  +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGDKKDTATSEAASGKKEIIVATNASPKPFNY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   +++        F  L S +  +   N  +T  R  
Sbjct: 60  NGELTGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDSDRYQMAVNNISYTKERAE 117

Query: 113 SLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H    
Sbjct: 118 --KYLYAAPTAKNPNVLVVKKDDSSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHADNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I +     + D    D        + N       ++     + P    
Sbjct: 176 TVLNYTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|159904803|ref|YP_001548465.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159886296|gb|ABX01233.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 252

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 82/245 (33%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+    + I  + ++ F+             K   L  GI+  L   + +    +  GF+
Sbjct: 1   MFNPKILIISTIFLIIFSGCIGEKQN-DKTLKNQVLTVGISPDLPPVSYLDGK-NPAGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    ++  +       ++          A+++  +D        T  RE    + F  
Sbjct: 59  IELITEIAKRM---ELTPKFKIYEFSSILAAVENNDVDCGIALIAITPEREKI--VDFSR 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      ++ +    + +  L    + V AG+  E  +  +    NM +  + +E  E
Sbjct: 114 CYFKTYTTIVVRENDSCNGLKCLESRKVGVLAGSIQESLMEGFLD--NMNFELVPYENQE 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +     +   D+   +     A  L NDR     I+ + +     A AI   + +    
Sbjct: 172 YMHKDLLSGNIDSEVCEYLT--AKNLINDRHYPLKIIGEKMDIQYDAIAINSENDDLKKA 229

Query: 241 VSWTH 245
           ++   
Sbjct: 230 INAAI 234


>gi|254360693|ref|ZP_04976842.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Mannheimia haemolytica PHL213]
 gi|153091233|gb|EDN73238.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Mannheimia haemolytica PHL213]
          Length = 238

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 29/209 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K          +LF    +  A  +  + +              F   +  G+  GFD
Sbjct: 1   MKKTLLT------LLFGCVVTAQAQDIKFVME---------PSYPPFEMTEEKGEIIGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +          +L+ KQ D        T  R+    + F  
Sbjct: 46  VDIANAICKEM---NANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKK--QVLFSE 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     FI  K    + V      +I VQ GTT +  LA   K +N       +   +
Sbjct: 101 PYFPSSAAFIAKKDTDFAKVK-----TIGVQNGTTYQHYLAKEKKEYN----VKSYASYQ 151

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                 +  R DA  GD+  L  +   ++
Sbjct: 152 NAILDVQNGRIDAIFGDVPVLAEMARKHE 180


>gi|227524120|ref|ZP_03954169.1| ABC superfamily ATP binding cassette transporter, substrate binding
           and permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088751|gb|EEI24063.1| ABC superfamily ATP binding cassette transporter, substrate binding
           and permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 488

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 88/262 (33%), Gaps = 29/262 (11%)

Query: 1   MYKD--------FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K          FV++L + ++   S S   + L  +K+RG L    +     +     
Sbjct: 1   MKKLKAIIQMMLVFVTLLTVSVIQTNSASAADNSLQRVKQRGELIMVTSPDYPPYEFQVN 60

Query: 53  NG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            G      G D+D  + ++  +      +    +N     +A+Q+ + D+     + T  
Sbjct: 61  KGGKSRIVGMDIDVAKKVAKDLGVK---LVIKSMNFDSLLVAIQTGKADMAIGGINPTNE 117

Query: 110 REISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           R     + F  I Y  GQ F++         SV  L G  I  Q GT             
Sbjct: 118 R--RQSVDFSDIYYSGGQSFLINSKDVNKYKSVKNLRGGKIGAQTGTLQYGLAKKRIP-- 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL- 226
                    ++  ++  A + ++ DA   +  +  A            ++P     +   
Sbjct: 174 --GATVKGMDKSTDLVLALKTNKIDALGIEKPSAEAYV---KNDPSLKMIPSGYHLNKND 228

Query: 227 ---APAIIQGDTEWYNIVSWTH 245
              A A  +G T   N V+ + 
Sbjct: 229 IGAAIAFKKGSTSLVNAVNKSI 250


>gi|221321671|ref|ZP_03602965.1| hypothetical protein BsubsS_01914 [Bacillus subtilis subsp.
           subtilis str. SMY]
          Length = 283

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 69/255 (27%), Gaps = 16/255 (6%)

Query: 3   KDFFVSILCLIILFFTSF-----STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN--- 53
           K    S      L   +      + +       IK +G +    +  L   +    +   
Sbjct: 4   KAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSYHDTDSGS 63

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G++V+  R  +  +     K+++  +       A+ S Q+D  + + D T  RE  
Sbjct: 64  DKLTGYEVEVVREAAKRLG---LKVEFKEMGIDGMLTAVNSGQVDAAANDIDVTKDREEK 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              +      +           GI ++  L G      A T       +  + +  K   
Sbjct: 121 FAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTVYM----EVARKYGAKEVI 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                 E+        R D    D              +  +        +  A  + + 
Sbjct: 177 YDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQALVMKKS 236

Query: 234 DTEWYNIVSWTHYAM 248
           +      ++     M
Sbjct: 237 NAALQKKMNEALKEM 251


>gi|156743218|ref|YP_001433347.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM
           13941]
 gi|156234546|gb|ABU59329.1| extracellular solute-binding protein family 3 [Roseiflexus
           castenholzii DSM 13941]
          Length = 276

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 84/255 (32%), Gaps = 22/255 (8%)

Query: 6   FVSILCLIILFFTSFSTNASI------------LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           F ++  LII+ + + + +A                 +++R  L+  ++ G   F  +  +
Sbjct: 17  FDAVALLIIVGYAALAVSAQTGLNVVGQGLDPVWAGVQQRRTLRVAVDLGFYPFTWM-ED 75

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G+D+D   A+++ +        ++P      +  L +++ DI           E+ 
Sbjct: 76  GKPAGYDIDLAHAIAARLGVQAE---FIPSGLDSIYDDLAARRADIAISALP--YAPELG 130

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F    +  GQ  ++     I+S + L+   + V  G+  +                
Sbjct: 131 WRARFSQFYFDAGQMLVVRSDSPITSEADLTAHVVGVALGSDADTLARRRLMEGASFVLR 190

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             ++   +  AA +    DA   D  A                L    +  P   A+   
Sbjct: 191 PDYDTPADALAALQRGEVDAVIVDHPAALIAMAHAPELRVAQAL----TFEPYVIAVAPE 246

Query: 234 DTEWYNIVSWTHYAM 248
               +  V+    A+
Sbjct: 247 AYRLHEAVNQALDAL 261


>gi|323499422|ref|ZP_08104396.1| arginine-binding periplasmic protein 2 [Vibrio sinaloensis DSM
           21326]
 gi|323315518|gb|EGA68555.1| arginine-binding periplasmic protein 2 [Vibrio sinaloensis DSM
           21326]
          Length = 162

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 18/180 (10%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L  L   + S +A           L  G +     +  V A+    GFD+D   A+ 
Sbjct: 1   VMLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVC 51

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +    ++  +   +      +L+ K+ D +    D T  RE    ++F    Y     
Sbjct: 52  KEM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSA 106

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++ +K    + + L G  + ++ GTT +  L D          P+ ++         + 
Sbjct: 107 VVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKN 162


>gi|291546359|emb|CBL19467.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Ruminococcus sp. SR1/5]
          Length = 268

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 84/245 (34%), Gaps = 12/245 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +     +LC+I+     FS+  ++     ++  +  G N     F  +  NG+  GFD D
Sbjct: 8   RALICFVLCMIMALPIYFSSAVAV--KAAEQQTIIIGTNAEYSPFEYLDDNGNITGFDYD 65

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++     +  K+ +  +       ++++  + +++     T  R+    + F  + 
Sbjct: 66  LLEAIAKE---ENVKLVWKDMPFDSLMGSMEAGDVQVIAAGIGPTEDRKK--SVDFSDVY 120

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVE 180
           Y   Q  I  K   I    ++SG ++ V  G  +++  +     +          F+   
Sbjct: 121 YTGTQCIISRKDNPIKDFEEMSGKTVAVLEGAQSDMIASGETTDYGEVKDAKVKRFKNAS 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +    DA   D          N    +        +       I +G+TE   I
Sbjct: 181 SAVMELKNGGADAVLIDNIMAEIYCKQNS---DLQYESVPSTAEDTVFCIEKGNTELVQI 237

Query: 241 VSWTH 245
           ++   
Sbjct: 238 INDGL 242


>gi|308178222|ref|YP_003917628.1| polar amino acid ABC transporter inner membrane and binding protein
           subunit [Arthrobacter arilaitensis Re117]
 gi|307745685|emb|CBT76657.1| polar amino acid ABC transporter, inner membrane and binding
           protein subunit [Arthrobacter arilaitensis Re117]
          Length = 489

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 80/256 (31%), Gaps = 14/256 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +    + + L+ +   + S  A     ++ +     G +T    F   + +G+  G D+
Sbjct: 15  RRWIAAAAIGLMAVVVGAPSALAQSSESVEGQ-TYVIGTDTTFAPFEFRQ-DGELTGIDM 72

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  RA++     +   ++   L       AL S Q+D +      T  R+      F   
Sbjct: 73  DLLRAIAEDQGFE---VEIRSLGFNAALAALSSNQVDGVIAGMSITDERKEI--YDFSEP 127

Query: 122 TYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +  G    +      I+S   L G ++  + G   E       K +  K      ++  
Sbjct: 128 YFESGVQMAVAANNEDITSYEDLKGKTVVAKTGAEGESYAKSIAKEYGFK--VKSLDQSA 185

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI-IQGDTEWYN 239
            +  + +A    A   D   L          +    + D +       A+    +T    
Sbjct: 186 TMYESVKAGSAVAVFDDYPVLAYGIAQ---GNGLKTVTDRVPGGSYGFAVNRGENTALLA 242

Query: 240 IVSWTHYAMVTAEELG 255
             +     +  + E  
Sbjct: 243 AFNDGLAELKASGEYD 258


>gi|187924032|ref|YP_001895674.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187715226|gb|ACD16450.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 260

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 74/221 (33%), Gaps = 13/221 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   ++ G++     F    A+G   GFD+D    +   +    +K  ++         
Sbjct: 23  KEWSTVRFGVDASYPPFESKSADGKLVGFDIDLGNEICRRL---NAKCVWVENAFDGMIP 79

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149
           AL+ ++ D +      T  R+  +   F    +      +  K   I  +   L G  I 
Sbjct: 80  ALKGRKFDGVLSTMSMTPARQAQIA--FSSKVFRIPTRLVAKKGSTITPTPEALKGKRIG 137

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V+ G+  E     Y++        + ++  + + +   A R DA   +        L   
Sbjct: 138 VEQGSIQETYAKTYWEPAG--AVIVAYQDQDLVYSDLLAGRIDASLQNAVQADVGFLRTP 195

Query: 210 RPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
           R  +     + +  +       A  + + DT+    +    
Sbjct: 196 RGKDFAFAGNALYDAKTLGSGTAIGLRKEDTDLKAQIDKAI 236


>gi|327441627|dbj|BAK17992.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Solibacillus silvestris
           StLB046]
          Length = 261

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 77/246 (31%), Gaps = 18/246 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59
           K   +    +   F ++ +    +    ++  +       +     F+ V   +    GF
Sbjct: 5   KKLILIFSFIAACFLSACAEKEKLADGSELIHKDQFVFAASGEFKPFSYVNNEDLTMSGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++   A++  +  +P + +      K     +++ + D+   +      R   +   F 
Sbjct: 65  DIEVGEAIAKELGLEPVQKRIK---FKGIVEGVKTGRADVAVASHTINPQRSKHVA--FS 119

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y+ G          I +V  L+G  + V  G+T   T +          +   ++  
Sbjct: 120 TPYYYSGPQIFTRPDSDIKTVDDLAGKEVAVAKGSTYADTASR------YTDNVKTYDSD 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A  + R DA   D            +    V    +I +S  A  + + +     
Sbjct: 174 ITALQALNSGRHDAVITDFVTG----KNAAKEGFKVEGQQLIERSEQAIVLPKDNPNLLK 229

Query: 240 IVSWTH 245
            V+   
Sbjct: 230 RVNEAL 235


>gi|306832761|ref|ZP_07465897.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304425110|gb|EFM28240.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 523

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 93/289 (32%), Gaps = 31/289 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------- 53
           M K        +++LF    S +A          +L+ G+      F   + +       
Sbjct: 1   MKKLLLSCFAAVLLLFGGMTSIHADE--------YLRIGMEAAYAPFNWTQDDDSNGAVP 52

Query: 54  ----GDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ ++  +   ++           AL S +ID+++     T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIADSLGKELLVVK---TTWTGLIPALTSGKIDMIAAGMSPTD 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ KK   ++ + L+  S   +  +   + L +     +
Sbjct: 110 ERKKEIA--FSDSYYTSYPVIVVSKKGDYANATSLADFS-GAKLTSQQGVYLYNLIDQIS 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISK 223
                       ++  A  +   D Y  +     + +  N                  S 
Sbjct: 167 GATKETAMGDFNQMRQALESGIIDGYVSERPDAISAENANSDFKMISFEEGQGFSTSESD 226

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           + +A  + + DTE    V+     +   E L +  K I +   D +  D
Sbjct: 227 TAIAVGLRKDDTEMLAKVNAVLAGISEDERLELMDKMIEEQPSDNSEED 275


>gi|196232954|ref|ZP_03131803.1| extracellular solute-binding protein family 3 [Chthoniobacter
           flavus Ellin428]
 gi|196222932|gb|EDY17453.1| extracellular solute-binding protein family 3 [Chthoniobacter
           flavus Ellin428]
          Length = 260

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 71/213 (33%), Gaps = 13/213 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G++     F      G   G  VD   AL +++      ++   +       AL++ 
Sbjct: 27  LVVGMDLSYPPFETRDTKGAPSGVSVDLAYALGASL---HRPVKIENIPFSGLIPALKTN 83

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAG 153
           +ID++  +   T  R  +  + F       G   ++  K  I S++ L   G +  V  G
Sbjct: 84  RIDLVISSMTATPER--AQSIDFSEPYLKTGLCLLVGAKSDIQSITDLDQVGRTAAVVKG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT  +    + K        +V ++           + +A+  D   L  L+      + 
Sbjct: 142 TTAHIYATQHLKLA----RILVLDQPASCVLEVVQGKANAFLFD--QLSNLQNWRKNSTT 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +         A  + +G+      V+    
Sbjct: 196 TRAILTPFQSEDWAIGLRKGNDSLRAQVNEFLK 228


>gi|300716051|ref|YP_003740854.1| Arginine-binding periplasmic protein 2 [Erwinia billingiae Eb661]
 gi|299061887|emb|CAX59003.1| Arginine-binding periplasmic protein 2 [Erwinia billingiae Eb661]
          Length = 245

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 86/250 (34%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +L        + +  A           L+   N     F  + A     GFD
Sbjct: 1   MLKFVFTLLLT----SICACAQAAEP---------LRFASNANNPPFEFLTAENQLVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +     +  +     +    +L+ ++ D +    D T  R+ +  + F  
Sbjct: 48  IDLAKALCDRMQK---QCIFTNNTFERLLPSLKFRRYDAIISGLDITDERKKT--VEFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             + +    +       S++ QL G  I + A TT +  L   +         + ++  +
Sbjct: 103 PYFMNSGTLVARAGLY-SNIEQLKGKRIGIGAETTQQAYLMTAWPE----IITVAYDNYQ 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 R  R D   GD  A+  L  TN         I       S L  A+ +G+TE  
Sbjct: 158 NALLDIRNGRLDGIFGDTLAVKELLKTNPHLAKVGDPITDSRFFGSGLGIAVRKGNTELR 217

Query: 239 NIVSWTHYAM 248
           + ++    ++
Sbjct: 218 DSLNQALQSL 227


>gi|304394880|ref|ZP_07376764.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304357133|gb|EFM21496.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 282

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 74/274 (27%), Gaps = 40/274 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F + L + +L  ++FS         K  G LK         F +   +G   G++
Sbjct: 3   MRNRLFTASLTVTLLATSAFSQA-------KDFGTLKFATEAAYPPFNQTTPSGKIVGYE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L+         I             L   + D +      T  R     + F  
Sbjct: 56  PDMVAELAKRAGFKYEIIA---QKWSGMIPGLIDGKYDAVVDAVTVTPKRAE--AIDFTH 110

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                   F+  KK  ++++                           G +I VQ  T   
Sbjct: 111 QYTVSVSSFVTAKKSPLATLPGSGTVVTADDAAGMKKAIDDLKTTFKGKTIAVQVATIQA 170

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L  Y            ++   E  A     R DA     + L A    N         
Sbjct: 171 DFLQKYL---GDVATIRTYQAGPETFADLMNGRVDAVMASRTNLNAFVKKNSDAISSSGY 227

Query: 218 PDIISKSPLAPAI--IQGDTEWYNIVSWTHYAMV 249
                      AI   +G++E   +++    +M+
Sbjct: 228 GFSGGVLGAGSAIGLRKGNSELQQVLNQALDSMI 261


>gi|257867388|ref|ZP_05647041.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC30]
 gi|257873719|ref|ZP_05653372.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC10]
 gi|257801444|gb|EEV30374.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC30]
 gi|257807883|gb|EEV36705.1| extracellular solute-binding protein [Enterococcus casseliflavus
           EC10]
          Length = 283

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 71/241 (29%), Gaps = 8/241 (3%)

Query: 6   FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F  +   ++L   S  T     L  +++   L    +  L   +      +  G+DVD  
Sbjct: 15  FFGLFAGVLLSACSKPTEEDTSLSKVEEAKTLVVATSGTLYPSSYYNDENELVGYDVDVA 74

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +  +   I +   N   +  +L   + D  + +   T  R     L+      F
Sbjct: 75  KEVAKRLGVE---ITFKEYNVDGQVSSLTRGEADFAANDFGLTDERAEKFSLSTPIKYSF 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D          GI+S+  L G         T+ + LA+ + A  + Y        ++   
Sbjct: 132 DSMIVRKSDDSGIASLEDLDGKK-AAGEPNTSYMRLAESYGAELVTYD---NATNDQYLT 187

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                R D    D                 ++     + +      ++        V   
Sbjct: 188 DVANGRTDVILNDYYLQKMAVAALPDIPVKILEDVYFNPNETGFLFVKDHQALQEKVDAV 247

Query: 245 H 245
            
Sbjct: 248 L 248


>gi|237744913|ref|ZP_04575394.1| amino acid-binding protein [Fusobacterium sp. 7_1]
 gi|229432142|gb|EEO42354.1| amino acid-binding protein [Fusobacterium sp. 7_1]
          Length = 235

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 78/256 (30%), Gaps = 30/256 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       ++ + +                 K   +  G N     F  +       GFD
Sbjct: 1   MLMSLLSVVISISVFA---------------KSNVVYVGTNAEFAPFEYL-EKNKIVGFD 44

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S        + +   +       ALQ+K+ID++      T  RE    +AF  
Sbjct: 45  IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKIDMVIAGMSATPEREK--AVAFSK 99

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  I       + S   L+G  + V  G T +  ++              F   
Sbjct: 100 PYFKAKQVVITKGVDKSLKSFKDLAGKKVGVMLGFTGDTVVSKI-----KGVKIERFNAA 154

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ DA   D     A K T +   + VI      +   A A  + D E  N
Sbjct: 155 YAAILALSQNKIDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 211

Query: 240 IVSWTHYAMVTAEELG 255
            V+     +    E  
Sbjct: 212 KVNAALDKIKANGEYD 227


>gi|210623570|ref|ZP_03293896.1| hypothetical protein CLOHIR_01846 [Clostridium hiranonis DSM 13275]
 gi|210153440|gb|EEA84446.1| hypothetical protein CLOHIR_01846 [Clostridium hiranonis DSM 13275]
          Length = 268

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 77/236 (32%), Gaps = 11/236 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            K   +++  +++L   + S+ +      D  ++  +  G +     +A  K + +  GF
Sbjct: 4   KKLLAIALAGVLMLGTVACSSKSGEEASGDAAEKTKVVIGTSAQYPPWAFQKDD-ELTGF 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    ++     +  +++Y           L + +ID ++     T  RE      F 
Sbjct: 63  EMDVWNEIAKR---NNYELEYKLGQFSGLVGMLDAGEIDTVAHQMSITPEREE--KYNFS 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               +      + +     +   L G  +    G   E TL      H + +  + ++ V
Sbjct: 118 EPYAYSYYDLFVKEDSPFQTKEDLKGKKVGCWLGGNGEATLRAMNDEHQLGFDIVTYDGV 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             ++      R DA                 P     L + ++    A    + + 
Sbjct: 178 P-MEDEVNLGRIDALWQGEIKTKTTVEEKQLPI--RQLNEKLTYEVNAYPFRKDEQ 230


>gi|172057719|ref|YP_001814179.1| extracellular solute-binding protein [Exiguobacterium sibiricum
           255-15]
 gi|171990240|gb|ACB61162.1| extracellular solute-binding protein family 3 [Exiguobacterium
           sibiricum 255-15]
          Length = 254

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 12/230 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            ++ K    K GI+     F     +  +KG D+D  +A++        KI++  ++   
Sbjct: 27  DEVSKDKTYKVGIDVTYPPFEYKDGD-TYKGIDIDLIKAIAKD---QGFKIKFEAMDFSG 82

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGA 146
              ALQ+ Q+D+       T  R+    + F    +  G   ++   +  I SV  L G 
Sbjct: 83  IIPALQANQLDVAIAGMSITPERKKV--VTFSAPYFKAGLILVVKEDENKIKSVDDLKGK 140

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            + V+ GTT      D      +      F     +    +     A   D   +     
Sbjct: 141 KVAVKKGTTGAKYATDNADKLGI--TVTQFNDSPAMFQEVKNGNAAALIEDYPVI--SYA 196

Query: 207 TNDRPSEHVILPDIISKSPLAPAI-IQGDTEWYNIVSWTHYAMVTAEELG 255
              +     ++ D ++      A+    + E    ++     +    E  
Sbjct: 197 NKQQNLGLKLVGDRLNGDNYGIAVLKGENEELMKKINKGLANLKENGEYD 246


>gi|94989776|ref|YP_597876.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS10270]
 gi|94543284|gb|ABF33332.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS10270]
          Length = 280

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++    + +      +   S      + G       +          F+  +  G
Sbjct: 1   MIKKQYLGRATIALASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMAGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G +  V  GTT+   L D+ K H+     +
Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            F      ++       + D    D   + A  + N        +    ++ P +     
Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFS 232

Query: 232 QGDTEWYNIVSW 243
           Q   +  + V+ 
Sbjct: 233 QDQEKLQSFVNK 244


>gi|238785200|ref|ZP_04629192.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia bercovieri ATCC 43970]
 gi|238713878|gb|EEQ05898.1| Histidine-binding periplasmic protein of high-affinity histidine
           transport system [Yersinia bercovieri ATCC 43970]
          Length = 260

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 20/244 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G +     F    A+G+  GFD+D  + L   I    +K  ++  +      +L++K
Sbjct: 28  VKIGTDPTYEPFESKNASGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLKAK 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+  +   F    Y      I  K   I  ++  L G  + V  G+
Sbjct: 85  KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIAPKDSKIEPTLVALKGKRVGVLQGS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E      ++   +    + ++  + I A   + R D    D  A     L  +    +
Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDTAFQDEVAGSEGFLKQEVGKGY 200

Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 +             + + D E          A+  A          ++++K   
Sbjct: 201 AFAGPSVKNDQFFGVGTGMGLRKDDAELKA-------ALDKAFAEMRKDGTYDKLAKKYF 253

Query: 270 NPDV 273
           + DV
Sbjct: 254 DFDV 257


>gi|325526098|gb|EGD03758.1| glutamine ABC transporter periplasmic protein [Burkholderia sp.
           TJI49]
          Length = 250

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 72/217 (33%), Gaps = 17/217 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +   +A           L  G +T  + F   + +  + GFD+D    ++        
Sbjct: 16  LGASIAHADT-------KTLVVGTDTSFMPFEFKQGD-KYVGFDLDLWAEIAKDQGWKY- 66

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
                P++      ALQ++ ID+          R+ ++  +  P         +      
Sbjct: 67  --TIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDFS-APYYDSGLAAMVQAGNTS 123

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+  L+G  I  + GT T     D+ KAH        F  +++   A  A R DA   
Sbjct: 124 IKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNIDQAYLALEAGRVDA-AM 178

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +      + N+   +  +    +S         +G
Sbjct: 179 HDTPNVLFFVNNEGKGKVKVAGQPVSGDKYGIGFPKG 215


>gi|307250613|ref|ZP_07532554.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306857354|gb|EFM89469.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 244

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 80/257 (31%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S + L                   +   L   +      F      G+  GFD
Sbjct: 6   MKKLLLASAIALTAFSA--------------QAKDLTFAMEPSYPPFELTNEKGEIIGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +          A++ K+ID      D T  R   +   F  
Sbjct: 52  VDIANAICKEI---QANCSFKSQAFDGLIQAVKQKRIDGAISAIDITEARAKQVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y     FI  K K   + +     ++ VQ GTT +  +    K    +Y P  +  ++
Sbjct: 107 VYYDSSASFIAVKDKADLNTA----KNVGVQNGTTFQQYVVAEAK----QYAPKSYASLQ 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       S     +       + L  A+ + + E  
Sbjct: 159 DAVLDLKNGRIDIIFGDTAVLADMLSKEAELSFVGDKVTNKKYFGNGLGIAVNKSNGELV 218

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 219 AELNKGLAAIKANGEYQ 235


>gi|241762905|ref|ZP_04760968.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241368080|gb|EER62285.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 299

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 80/233 (34%), Gaps = 18/233 (7%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             + L  I++RG L  GI+     F ++    G   G+  +    ++  +      +   
Sbjct: 23  ADATLDKIRQRGKLSVGIDGASPPFGKLDPATGKTGGYQTELAADIAKRLGVQLETVP-- 80

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP-ITYFDGQGFIMHKKKGISSV 140
            + A  R   LQS ++D+L  N  WT  RE S  L+F P      G   ++ K  GI+  
Sbjct: 81  -VTANTRVQFLQSGKVDLLIANIQWT--RERSEILSFAPTPYDLIGGAALVAKASGITRW 137

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L G   CV  G+     LA+   A            + E   A +   C A      A
Sbjct: 138 EDLRGKVACVSQGSNYAKPLAEAHGA-----VVKGLRGIPESLLALKGGTCAASVHIQPA 192

Query: 201 LYALKLTNDRPSEHVILPDIISKS-----PLAPAIIQGDTEWYNIVSWTHYAM 248
           LY   L      E      + S+      P      +G+ +    V       
Sbjct: 193 LY-ETLNGPNGGEWKDFALVGSRDQLIPSPTVVWTRRGEADTQAFVDKAIQDW 244


>gi|294794719|ref|ZP_06759854.1| probable amino acid ABC transporter, periplasmic-binding protein
           [Veillonella sp. 3_1_44]
 gi|294454081|gb|EFG22455.1| probable amino acid ABC transporter, periplasmic-binding protein
           [Veillonella sp. 3_1_44]
          Length = 279

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 8/245 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K F +  L L +L       + S    +      +       +  ++    NG+  GFDV
Sbjct: 9   KLFAIGALALGVLVVAGCGDDTSKDAKVNPDAKVINVATRGTVRPYSYTDDNGNLTGFDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +     +      + P+     F+A+ + Q+D+++        RE          
Sbjct: 69  ELLKEIERR--NPDLHFNFKPMAVDAAFVAMDAGQVDMIANQMRRNPTREAKFYYTNEVN 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV-E 180
            Y   +  + + +  IS +  L G  I V   +     +  + +  N +   I  ++   
Sbjct: 127 NYSTRKLVVKNDRNDISKLDDLKGKKIAVTTSSEFNELVKQFNETANPQIEVIYTDKAGA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        R DA               DR      + D+++  P     +   T+    
Sbjct: 187 ETLNLVATGRADA--AGEYEYVINSAIKDRGLPLKAVGDVLAVVP--TYFLSKRTDDMKQ 242

Query: 241 VSWTH 245
           V+   
Sbjct: 243 VNEKI 247


>gi|107026632|ref|YP_624143.1| glutamine ABC transporter periplasmic protein [Burkholderia
           cenocepacia AU 1054]
 gi|116692178|ref|YP_837711.1| glutamine ABC transporter periplasmic protein [Burkholderia
           cenocepacia HI2424]
 gi|105896006|gb|ABF79170.1| L-glutamine-binding protein [Burkholderia cenocepacia AU 1054]
 gi|116650178|gb|ABK10818.1| L-glutamine-binding protein [Burkholderia cenocepacia HI2424]
          Length = 250

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G +T  + F   + +  + GFD+D    ++             P++      A
Sbjct: 24  DTKTLVVGTDTSFMPFEFKQGD-KYVGFDLDLWAEIAKDQGWKY---TIQPMDFAGLIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ++ ID+          R+ ++  +  P         +      I S+  L+G  I  +
Sbjct: 80  LQTQNIDVALSGMTIKEERKKAIDFS-APYYDSGLAAMVQAGNTSIKSIDDLNGKVIAAK 138

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT T     D+ KAH        F  +++   A  A R DA     +      + N+  
Sbjct: 139 TGTATI----DWIKAHLKPKEVRQFPNIDQAYLALEAGRVDA-AMHDTPNVLFFVNNEGK 193

Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235
            +  +    +S         +G  
Sbjct: 194 GKVQVAGQPVSGDKYGIGFPKGSP 217


>gi|331000075|ref|ZP_08323770.1| putative cystine-binding periplasmic protein [Parasutterella
           excrementihominis YIT 11859]
 gi|329572959|gb|EGG54579.1| putative cystine-binding periplasmic protein [Parasutterella
           excrementihominis YIT 11859]
          Length = 270

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 22/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M     + +     L              S +   L  IK  G LK G+      F+   
Sbjct: 1   MKFGLGLFLAGSASLMLVGCDKAPSRNSASASQDHLARIKSSGELKVGLEGDWQPFSFHN 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G+DV+  + L+  +       + +       F  + + + D++    D T  R 
Sbjct: 61  EKDQLVGYDVEVAQNLAKKLGVKA---KIVEGPWDGLFAGMDTGRYDLVINGVDVTPDRA 117

Query: 112 ISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
            +    F     +D    I       I S + L G +     G+T +             
Sbjct: 118 KT--YDFSTPYAYDRTVLITRSDNNDIHSFNDLKGKTTANSIGSTYQEI------GEKYG 169

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 + + E     +  +  A T + S  Y   + +       I   +   +  A  +
Sbjct: 170 AKVSGVDTLAETLQMVKNRQVQA-TINASTSYGDYMKHRPDEPLKIAATMDKVTEYAIPM 228

Query: 231 IQGDTE 236
            +G+  
Sbjct: 229 KKGEDN 234


>gi|325261528|ref|ZP_08128266.1| arginine-binding extracellular protein ArtP [Clostridium sp. D5]
 gi|324032982|gb|EGB94259.1| arginine-binding extracellular protein ArtP [Clostridium sp. D5]
          Length = 266

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 82/252 (32%), Gaps = 22/252 (8%)

Query: 1   MYKDFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K     +L  + +F  +        S+        KK   L    N     +   +  
Sbjct: 7   MKKKIISLLLVAVCVFSMAACGSKKEDSSTGDSGDATKKE-KLVMATNAEFPPYEFYEGK 65

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            D  G D D   A++  +     +++   +       A+ S + DI +     T   +  
Sbjct: 66  -DVVGIDADIAAAVAEEMG---MELEIEDMAFDSIITAVTSGKADIGAAGMTVTE--DRL 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F        Q  I+ +   I+   +L+G  I VQ GTT ++   D   A       
Sbjct: 120 ENVDFTDTYATATQVIIVKEDSAITGPDELNGKKIGVQLGTTGDIYADDIEDA-----TV 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             + +  E   A +  + DA   D       K          IL +  ++   A A+ + 
Sbjct: 175 ERYNKGFEAVQALQQGKIDAVVID---GEPAKEFVKEAEGLKILDEAFTEEEYAIAVKKE 231

Query: 234 DTEWYNIVSWTH 245
           + E    ++   
Sbjct: 232 NDELKEKINDAL 243


>gi|1346418|sp|P49618|LAPT_PASHA RecName: Full=Arginine-binding periplasmic protein; Flags:
           Precursor
 gi|387859|gb|AAA25536.1| periplasmic-binding protein [Mannheimia haemolytica]
          Length = 237

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 30/209 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +   ++   T+ + +                +      F   +  G+  GFD
Sbjct: 1   MKKTLLTLLFGCVV---TAQAQD-------------IIVMEPSYPPFEMTEEKGEIIGFD 44

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +          +L+ KQ D        T  R+    + F  
Sbjct: 45  VDIANAICKEM---NANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKK--QVLFSE 99

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     FI  K    + V      +I VQ GTT +  LA   K +N       +   +
Sbjct: 100 PYFPSSAAFIAKKDTDFAKVK-----TIGVQNGTTYQHYLAKEKKEYN----VKSYASYQ 150

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                 +  R DA  GD+  L  +   ++
Sbjct: 151 NAILDVQNGRIDAIFGDVPVLAEMARKHE 179


>gi|257440500|ref|ZP_05616255.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Faecalibacterium prausnitzii A2-165]
 gi|257197122|gb|EEU95406.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Faecalibacterium prausnitzii A2-165]
          Length = 215

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 80/222 (36%), Gaps = 19/222 (8%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
              N     +      G+++G D+D  +A++  +     ++Q   ++     L++Q  + 
Sbjct: 1   MATNAAFPPYEMTTDAGEFEGIDIDTAKAIAEKLG---LELQIDDMDFDAALLSVQQGKA 57

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           DI+      T  R+  +   F        Q  I+ +   I+S   L+G  I  Q GTT  
Sbjct: 58  DIVMAGVTVTDERKAVM--DFSDSYATGIQSIIVPEGSDITSPDDLAGKKIGTQRGTTGY 115

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           +  +D F         + ++       A    + DA   D +   A +     P   VIL
Sbjct: 116 IYCSDDFG----DDAVVAYDDGLTAVQALNNGQVDAVVIDNA--PAKEFVAANPG-LVIL 168

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               ++   A  + +G +   + V+         EEL     
Sbjct: 169 DTSYAEEDYAIGLAKG-SALEDAVNAAL------EELKADGT 203


>gi|170694032|ref|ZP_02885188.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170141104|gb|EDT09276.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 264

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 79/224 (35%), Gaps = 14/224 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F      G+ +G D+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKGPGGELQGLDIDVGNAVCAAA---KMTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I  +  G + +   L G  + V   
Sbjct: 87  RKFDAINSAMNATEQR--RQAIDFTTVVYRVPTQLIAKRDSGLLPTAEALKGKRVGVLQA 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     +++        + ++   ++     A R DA      A     L+     +
Sbjct: 145 SIQETFAKTHWEPAG--VTVVPYQDQNQVYTDLVAGRVDATLVLAPAGQTGFLSKPNGKD 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +  +   +         +A  I +GDT   + ++    A V A+
Sbjct: 203 YAFVGQPVRDDKILGSGIAYGIRKGDTALRDRLNAAI-AKVQAD 245


>gi|134300077|ref|YP_001113573.1| extracellular solute-binding protein [Desulfotomaculum reducens
           MI-1]
 gi|134052777|gb|ABO50748.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 279

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 27/228 (11%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M K         L +++L     S  +S     K  G  K G+  G   F       +NG
Sbjct: 1   MKKKISILIAMSLAVMLLLTGCGSGGSSETKKEKTGGTFKVGLECGYAPFNWTQMDDSNG 60

Query: 55  DWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
             K         G+DV+  + ++  +  +   +  +         AL S +ID +     
Sbjct: 61  AVKIDGNAEYAGGYDVEIAKKIAKGLGKE---LVIVKTEWDGLVPALTSGKIDAIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R+ +  + F  I Y      ++    K +G  S+   +GA +  Q  T     +  
Sbjct: 118 PTAERKKT--IDFSDIYYKSDLVMVVKKGGKYEGAKSIQDFNGAKVTAQLNTFHYTVIDQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                         +    +  A  +   D Y  +     +    N  
Sbjct: 176 IKGVAKQP----AMDNFPAMRVALESGIIDGYVSERPEGVSASTANPN 219


>gi|258543771|ref|ZP_05704005.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Cardiobacterium hominis ATCC 15826]
 gi|258521007|gb|EEV89866.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein [Cardiobacterium hominis ATCC 15826]
          Length = 261

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 65/235 (27%), Gaps = 15/235 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           + FT+ +   S+L  I   G +    +     F    A+G   G+D++  RA++  +   
Sbjct: 13  VSFTAHAAE-SLLARINNHGTIVVATDGAYPPFNYHDASGKLTGYDIEVTRAIAEKLG-- 69

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
              + +           L+S + D ++         E     A      + G   +  K 
Sbjct: 70  -ITVDFQETLWDGMLAGLKSGRFDAVANQVTL-GTPERRAAFAGAIPYSWTGAMVLTRKD 127

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              +  ++ L G        +          +A       +  E + +     +  R D 
Sbjct: 128 DDRVHDIADLKGLKAGQTLNSNHAQ------RAEAAGAVLVPVESLPQALTLVQQGRADL 181

Query: 194 YTGDISALYALKLTNDRP--SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              D  ++                  P      P    + + +      +     
Sbjct: 182 TLHDSLSMLDYLKRTPDSGLKVAWEAPRAEW-EPSGLVVAKENEAALAPIDAALK 235


>gi|126735297|ref|ZP_01751043.1| periplasmic binding protein, putative [Roseobacter sp. CCS2]
 gi|126715852|gb|EBA12717.1| periplasmic binding protein, putative [Roseobacter sp. CCS2]
          Length = 240

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 25/199 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++   +    T    ++           ++ G       F  +  +G+  GF+
Sbjct: 1   MKNLILTTVALAVAGSMTFADGHS----------VVRLGTEGAYPPFNFLNDDGEVDGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    + +         +++  +       L S   D++      T  R+    + F  
Sbjct: 51  REVGDEICARA---ELTCEWVTNDWDSIIPNLVSGNYDVIIAGMSITDERDEV--IDFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                     +     +     L  A +  Q GT     +A            + F   +
Sbjct: 106 NYTQPDPSAYLATSSDV----DLENAVLAAQTGTIQAAFIA------GTGATLLEFATPD 155

Query: 181 EIDAAYRAHRCDAYTGDIS 199
           E  AA +A   DA   D S
Sbjct: 156 ETVAAVKAGEADAVLADKS 174


>gi|160901198|ref|YP_001566780.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160366782|gb|ABX38395.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 272

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 76/223 (34%), Gaps = 11/223 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             IK+RG +  G+      F  +        G++V     ++  +      ++ + +   
Sbjct: 26  DRIKQRGKIVVGVMLSGPPFGTIDPVTQRHVGYNVQLSEGVAKGLG---VGVETVQVQPS 82

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   LQ  ++DIL  N  WT  R   L     P     G      K  G+     L G 
Sbjct: 83  NRVQFLQQGKVDILIANMQWTQERSEILSFVPTPFEEVGGAAIA-KKSSGVRQWDDLRGK 141

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +CV  G+     LAD + A         F    E   A +   C A       L  L  
Sbjct: 142 PVCVSQGSNFTKPLADQYGA-----QIKAFRGQPESLLALKGGNCAAAVHVSPTLRELVA 196

Query: 207 TNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +N    ++ I+ P  I  SP    + +G+++    +       
Sbjct: 197 SNADWKDYEIVSPADIIPSPSVIWLRKGESDTQAAIDRIVQDW 239


>gi|260429996|ref|ZP_05783971.1| putative solute binding protein of ABC transporter system
           [Citreicella sp. SE45]
 gi|260418919|gb|EEX12174.1| putative solute binding protein of ABC transporter system
           [Citreicella sp. SE45]
          Length = 286

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 75/260 (28%), Gaps = 20/260 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASIL---------GDIKKRGFLKCGINTGLVGFAEVKANG 54
               +I  L+I      +  A  +           ++  G L    +     F  V  +G
Sbjct: 5   SLKKAIAALVIGLAAGTAAQAQDVVQEARDALPEAVRDSGVLSIATSLQWAPFGYVDEDG 64

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +G D+   + L++ +  +     +  +        +Q+ +          T  R   +
Sbjct: 65  NPEGIDLRLMKVLAAKLGLEAE---FDNIKFPSIVPGVQTGRYAAGVNQMGITAERAEVV 121

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT----TELTLADYFKAHNMK 170
              F P  +    G ++   K    ++ L G  + +  G++     E   A         
Sbjct: 122 A--FVP-YFNSKYGLLVPTGKTDIDINDLCGVKLALTQGSSQIAVAEQLSAKCEADGKEP 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                +    +   A    R D +    +        ND+      + D  S       +
Sbjct: 179 IGMDFYPNSADTYLAVANGRGDGFLTARAVGVYTAQMNDKLEMTDGILDGRSSIS-GIVV 237

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            + D      ++    + V 
Sbjct: 238 SKEDPAMQEALTLALVSAVE 257


>gi|226323643|ref|ZP_03799161.1| hypothetical protein COPCOM_01418 [Coprococcus comes ATCC 27758]
 gi|225207827|gb|EEG90181.1| hypothetical protein COPCOM_01418 [Coprococcus comes ATCC 27758]
          Length = 237

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 63/211 (29%), Gaps = 24/211 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46
           M K   +++   ++L   +                 + S +  ++ +G L  GI T    
Sbjct: 1   MKKITALALTSAMVLSLAACGGSSSDTKTSDDSKKASKSDVEYVQDKGTLVVGI-TDFEP 59

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                   +W GFD D  +A + ++  D     ++ ++   + + L  K ID +      
Sbjct: 60  MDYKNDKDEWIGFDADMAKAFAKSLGVDAE---FVEIDWDNKVMELDGKTIDCVWNGMTL 116

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T     ++                  K         L   S  V++G+  E  ++     
Sbjct: 117 TDEVTSAMACTSAYCNNAQVVVVPSDKADKYQDKDSLKDLSFAVESGSAGEKAVS----- 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
               Y         +      A   DA   D
Sbjct: 172 -GEGYDYTAVSSQSDALMEVAAGTSDAAVID 201


>gi|123441154|ref|YP_001005142.1| ABC transporter, solute-binding component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088115|emb|CAL10903.1| ABC transporter, solute-binding component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 285

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 79/252 (31%), Gaps = 19/252 (7%)

Query: 1   MYKD-----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +         ++LC   +F  +   +A +L  IK    +          F  V  NG 
Sbjct: 1   MTRRKQAIPLCWAMLCAASVFSGAV-HSADLLDKIKADKTITIATEARYAPFESV-ENGK 58

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD    +         +++ L L  +     L +K+ D +         R     
Sbjct: 59  IVGYDVDLMNHILQKSL-PGVEVKQLDLPFQGILPGLDAKKFDFVVTAVTVNKQR--MDH 115

Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP- 173
            AF           +       I+S+  LSG  +  QAG+     L ++ K       P 
Sbjct: 116 FAFTVPIAESTVALLKRGNDSSINSLDDLSGKVVGSQAGSGQLQVLQEFDKKLKASGKPG 175

Query: 174 ----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAP 228
                 +   +E  A     R D     ++ L  L     RP     L P +   +    
Sbjct: 176 IKEIKQYVSFDEAYADLANQRLDGVAQSLANLGPLI--KTRPGVFTTLKPMLGPTTYFGW 233

Query: 229 AIIQGDTEWYNI 240
              +GD     +
Sbjct: 234 VGRKGDDSATLV 245


>gi|330953615|gb|EGH53875.1| arginine/ornithine ABC transporter periplasmic
           arginine/ornithine-binding protein [Pseudomonas syringae
           Cit 7]
          Length = 249

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 70/211 (33%), Gaps = 15/211 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK GI      FA    +G   GFD D   AL   +     K  ++         AL+ +
Sbjct: 17  LKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEEM---KVKCTWVEQEFDGLIPALKVR 73

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           +ID +  +   T  R+    + F    Y      +M     +  S+++L G  I VQ G+
Sbjct: 74  KIDAILSSMSITDDRKK--SVDFTGKYYNSPARLVMKDGTTVSDSLAELKGKKIGVQRGS 131

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E    +             +    EI     A R D    D + L    L  D    +
Sbjct: 132 IHERFAREVLAPKG--VEVTPYGSQNEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGY 189

Query: 215 VILPDIISKSP------LAPAIIQGDTEWYN 239
             +       P      +  A+ +GD    +
Sbjct: 190 AFVG-PSFVDPKYFGDGIGIAVRKGDKANLD 219


>gi|213966208|ref|ZP_03394393.1| glutamate binding protein [Corynebacterium amycolatum SK46]
 gi|213951143|gb|EEB62540.1| glutamate binding protein [Corynebacterium amycolatum SK46]
          Length = 313

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 81/258 (31%), Gaps = 22/258 (8%)

Query: 13  IILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----A 66
             +   +  +      L DI + G +  G      G  E   + +++G D D  R     
Sbjct: 35  TTMSLAACGSGGPRNLLADI-EAGHVTLGTKFDQPGLGERTPDREFEGVDNDVSRYVIEY 93

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +++    D  ++++    + +R   + + ++++++        R     + F        
Sbjct: 94  IANKNGWDVPEMEWRETPSAQRETLINNGEVNMIAATYSINAGRLA--AVDFAGPYLVTH 151

Query: 127 QGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           Q  ++   +GI  +  +  G  +C  +G+T    + D             F+        
Sbjct: 152 QALLVRGSEGIQGLDDVAPGTRLCSVSGSTPAQKVKDALPE----VQLQEFDTYAACAEG 207

Query: 186 YRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISK------SPLAPAIIQGDTEW 237
            +    DA T D + L             +  ++                  + +GD   
Sbjct: 208 VKQGVVDALTTDATILAGFAQRYKERFGDDFRVVELRNPDGSYWTNEYYGIGLPKGDDAS 267

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++    ++    EL 
Sbjct: 268 REAINEALESLYDTGELQ 285


>gi|326794577|ref|YP_004312397.1| histidine kinase [Marinomonas mediterranea MMB-1]
 gi|326545341|gb|ADZ90561.1| histidine kinase [Marinomonas mediterranea MMB-1]
          Length = 577

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 11/199 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L LI L   + + +A        +  +  G +     +     NG+  G+ 
Sbjct: 1   MRSTIPRYLLALISLLVFAGTVDAKTREHHLSKRVITIGADYNYPPYEFADENGEPTGYT 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++  +  D   ++    + +  +  L++ Q D+L          E +  + F  
Sbjct: 61  VDITHAIAEVMGFD---VEITLTDWRHAYEGLKTGQFDVLQG---IAFSEERAKSILFSS 114

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 Q     K    I ++ +L+G  + VQ  +     L    K       PI     
Sbjct: 115 PHSIANQSIFARKGAPEIETIGELAGKEVIVQNASIMHEYL----KKAVPDAVPIPAATH 170

Query: 180 EEIDAAYRAHRCDAYTGDI 198
            E      + + D      
Sbjct: 171 AEALRLLASGKHDFALTAN 189


>gi|296161860|ref|ZP_06844661.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295887879|gb|EFG67696.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 264

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 83/224 (37%), Gaps = 14/224 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NG+ +G D+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKGPNGELQGLDIDVGNAVCTAA---HMTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I  +  G + + + L G  + V   
Sbjct: 87  RKFDAINSAMNATEQR--RQAIDFTTVVYRVPTQLIAKRDSGLLPTTASLKGKRVGVLQS 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++++       + ++   ++     A R DA      A     L+    + 
Sbjct: 145 SIQETFAKAHWESAG--VTVVPYQDQNQVYTDLVAGRLDATLVLAPAGQTGFLSKPNGAG 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +  + + +         +A  I +GDT   + ++    A V A+
Sbjct: 203 YAFVGEPVRDDKILGSGIAYGIRKGDTALRDRLNAAI-AKVQAD 245


>gi|227530176|ref|ZP_03960225.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
 gi|227349851|gb|EEJ40142.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
          Length = 146

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 9/148 (6%)

Query: 1   MYKDF------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53
           M K +       V+++ + +L   S   N  +L   +K   +  G+      F       
Sbjct: 1   MKKIWHLLTIAAVALISITVLSGCSSVANQDVLKVDQKNKQITWGVKADTRLFGLENIRT 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  +GF++D  +A++  I     K  ++P+ +  R   L++  ID +      T  RE  
Sbjct: 61  GKLEGFEIDLAKAMTKEILGPNGKAVFVPVTSSTRVPLLKNGNIDTIMATMTITPEREK- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVS 141
             + F    +  GQ  ++ K   I ++ 
Sbjct: 120 -QVDFTKSYFDAGQSLLVKKGSPIKNIQ 146


>gi|221197370|ref|ZP_03570417.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
 gi|221204044|ref|ZP_03577062.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221176210|gb|EEE08639.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2]
 gi|221183924|gb|EEE16324.1| histidine ABC transporter, periplasmic histidine-binding protein
           [Burkholderia multivorans CGD2M]
          Length = 260

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++  ++           +G   GF VD   AL + +    ++  ++  +       L 
Sbjct: 25  KEIRLAVDPTYPPLEYKLPDGTLTGFGVDITNALCAEL---HARCVWVESSFDGMIPGLL 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D+++ +   T  R     +AF           I  K    + + + L G  + V+ 
Sbjct: 82  ARKFDVIASSMTITPKR--MQQIAFTNRISNAPARLIARKGSPLLPTAAALKGKRVGVEQ 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+         ++        + ++  +++ A     R DA      A     L   +  
Sbjct: 140 GSAQADYAIANWQPAG--AQIVSYQNQDQVYADLVTGRLDAAFQASIAASDGFLKKPQGK 197

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +   +   I             + + D+E     +    A + A
Sbjct: 198 DFAFVGAPIDDVKYFGQGDGLGLRKQDSELREAFNRAL-ATILA 240


>gi|161521674|ref|YP_001585101.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189352160|ref|YP_001947787.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160345724|gb|ABX18809.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189336182|dbj|BAG45251.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 260

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++  ++           +G   GF VD   AL + +    ++  ++  +       L 
Sbjct: 25  KEIRLAVDPTYPPLEYKLPDGTLTGFGVDITNALCAEL---RARCVWVESSFDGMIPGLL 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           +++ D+++ +   T  R     +AF           I  K    + + + L G  + V+ 
Sbjct: 82  ARKFDVIASSMTITPKR--MQQIAFTNRISNAPARLIARKGSPLLPTAAALKGKRVGVEQ 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+         ++        + ++  +++ A     R DA      A     L   +  
Sbjct: 140 GSAQADYAIANWQPAG--AQIVSYQNQDQVYADLVTGRLDAAFQASIAASDGFLKKPQGK 197

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +   +   I  +          + + DTE     +    A + A
Sbjct: 198 DFAFVGAPIEDTKYFGQGDGLGLRKQDTELREAFNRAL-ATILA 240


>gi|27364458|ref|NP_759986.1| Cyclohexadienyl dehydratase [Vibrio vulnificus CMCP6]
 gi|27360577|gb|AAO09513.1| Cyclohexadienyl dehydratase [Vibrio vulnificus CMCP6]
          Length = 258

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 78/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K +    L L+     + +   S L +I   G L+ G              N  ++GF
Sbjct: 1   MKKTWLALGLGLLAASTLANAQ--SRLNEILDNGVLRVGTTGDWNPMTMKDPANNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +   ++ R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITADKYD-ITGSASLSMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  S        +    GT  E  + ++F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLGKYSDWSDFDKADVKVAATLGTVQEKMVKEFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLAKRADVSVTSNVEAATLVEKFQQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N V+
Sbjct: 230 INYVN 234


>gi|296388588|ref|ZP_06878063.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           PAb1]
          Length = 261

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ G++         + +G   GF ++   AL + +    ++ +++  N      AL 
Sbjct: 26  KVLRLGVDPTYPPLEYKQPDGRLAGFGIEIGEALCAEL---QARCEWVESNWDGIIPALL 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           S++ID +  +   T  R   +   F           ++ +    +     L G  + V  
Sbjct: 83  SRKIDAIVSSMTITPKRAQHIA--FTDRVSNAPSRLVVRRGSALLPDAESLRGKRVGVGQ 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E      + A       + ++  +++ A     R DA            L      
Sbjct: 141 GSNQEAYAKAEWAAKG--VRVVSYQNQDQVYADLVMGRLDASLQGAVQASYGFLDKPVGK 198

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +  +   ++             + + D      ++    A + A
Sbjct: 199 DFELAGAVLDDPRYFGVGDGIGLRKEDVALREDLNKAL-ATIRA 241


>gi|94991785|ref|YP_599884.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS2096]
 gi|94545293|gb|ABF35340.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS2096]
          Length = 260

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 77/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++    + +      +   S      + G       +          F+  +  G
Sbjct: 1   MIKKQYLGRATIALASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  ++ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYRVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G +  V  GTT+   L D+ K H+     +
Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            F      ++       + D    D   + A  + N        +    ++ P +     
Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFS 232

Query: 232 QGDTEWYNIVSW 243
           Q   +  + V+ 
Sbjct: 233 QDQEKLQSFVNK 244


>gi|71902928|ref|YP_279731.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS6180]
 gi|94987900|ref|YP_596001.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS9429]
 gi|71802023|gb|AAX71376.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS6180]
 gi|94541408|gb|ABF31457.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS9429]
          Length = 280

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 77/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++    + +      +   S      + G       +          F+  +  G
Sbjct: 1   MIKKQYLGRATIALASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  ++ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYRVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G +  V  GTT+   L D+ K H+     +
Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            F      ++       + D    D   + A  + N        +    ++ P +     
Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFS 232

Query: 232 QGDTEWYNIVSW 243
           Q   +  + V+ 
Sbjct: 233 QDQEKLQSFVNK 244


>gi|238893599|ref|YP_002918333.1| glutamine ABC transport system periplasmic binding component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238545915|dbj|BAH62266.1| glutamine ABC transport system periplasmic binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 355

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 13/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  ++    S+   A+ L +I+K G LK         F  +  NG   GF+
Sbjct: 73  MKKSLASMCLSAVLTVAFSYHAVAADLPEIEKSGTLKVATEDDYAPFNFMN-NGQADGFN 131

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L          +    L       A+ + Q D+       T  R       F P
Sbjct: 132 KDMLEELRK---YAKFHVDQSILPWTGLLAAVSTGQYDMALTGAVITDERLKV--FDFTP 186

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIV 175
                   F+       +++++ LSG  + +QAG+     L +      K        + 
Sbjct: 187 PWASAQHYFVKRAGDTSLNTIADLSGKKVGLQAGSALLARLPELKAMLEKTGGKLGPVVE 246

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E  A     R D        +    L   +P        +     +A  I +   
Sbjct: 247 YPSYPEAYADLANKRLDYVI--NVVISVNDLAKAKPKVFAKGLAVSGPGYMAWPIPKNSP 304

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +    ++     M    +L 
Sbjct: 305 QLLAYMTKFMNHMKETGKLA 324


>gi|94993661|ref|YP_601759.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS10750]
 gi|94547169|gb|ABF37215.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS10750]
          Length = 280

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++    + +      +   S      + G       +          F+  +  G
Sbjct: 1   MIKKQYLGRATIALASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G +  V  GTT+   L D+ K H+     +
Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            F      ++       + D    D   + A  + N        +    ++ P +     
Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFS 232

Query: 232 QGDTEWYNIVSW 243
           Q   +  + V+ 
Sbjct: 233 QDQEKLQSFVNK 244


>gi|15674482|ref|NP_268656.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           M1 GAS]
 gi|21909768|ref|NP_664036.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS315]
 gi|28896539|ref|NP_802889.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           SSI-1]
 gi|56808375|ref|ZP_00366129.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Streptococcus pyogenes M49
           591]
 gi|71910084|ref|YP_281634.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS5005]
 gi|13621582|gb|AAK33377.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|21903953|gb|AAM78839.1| putative amino acid ABC transport substrate-binding protein
           [Streptococcus pyogenes MGAS315]
 gi|28811793|dbj|BAC64722.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
 gi|71852866|gb|AAZ50889.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS5005]
          Length = 280

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++    + +      +   S      + G       +          F+  +  G
Sbjct: 1   MIKKQYLGRATIALASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G +  V  GTT+   L D+ K H+     +
Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            F      ++       + D    D   + A  + N        +    ++ P +     
Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFS 232

Query: 232 QGDTEWYNIVSW 243
           Q   +  + V+ 
Sbjct: 233 QDQEKLQSFVNK 244


>gi|229551205|ref|ZP_04439930.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315497|gb|EEN81470.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 488

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 18/278 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +     G +     F     +  + G D+D  +A++     +  K++  PL       A
Sbjct: 33  AQKTYTIGTDVTFAPFEFANQDNKYVGIDLDLIKAIAKE---EGFKVEIKPLGFNAAVQA 89

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++KQID +      T  R+           Y  G    + KK  I S+  L G  + ++
Sbjct: 90  LEAKQIDGVIAGMSITPERK--QKFLMSDPYYKSGVVMAVAKKSKIKSLKDLRGKRVAIK 147

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +              +  + F+    +          A   D   +   +   +  
Sbjct: 148 TGTDSADYANSI--KQKYGFTTVTFDDSNNMYQDVITGNSAACFEDQPVM---QYGINNG 202

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
               ++     +     A  + +    +  +           Y  +    LG       +
Sbjct: 203 MALKLVGKPAREGSYGFAASKNNQALISKFNTGLKKLRANGQYDKIIEHYLGNGSAESQK 262

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            +   +    + F+G+ K++      GL +     I+ 
Sbjct: 263 TAAGNSQTTDRSFIGLLKANWSTLMDGLRETMVLTIVA 300


>gi|323529861|ref|YP_004232013.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323386863|gb|ADX58953.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 275

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 67/230 (29%), Gaps = 10/230 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L +   +  +     L  +KK G L  G       F  +  NG   GF+ +    + 
Sbjct: 11  LVMLALCAASVGAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKELFAEVG 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++++ L        L++ + D++      T  R       +          
Sbjct: 70  KELGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPIADATDA 124

Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +       +   S ++G ++    G+     L  Y            +    +  A   
Sbjct: 125 LLKRANDSSLKQSSDIAGKTVGAGKGSAQLDQLKAYVATLPKPPEIREYVDNNQAYADLA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
           A R  A    ++ +    +   RP    ++          A  + +    
Sbjct: 185 AGRIAAVANSMTNIA--YVAKQRPETFAVVQPPFGAKVYFAYCMRKDADS 232


>gi|167766050|ref|ZP_02438103.1| hypothetical protein CLOSS21_00543 [Clostridium sp. SS2/1]
 gi|167712130|gb|EDS22709.1| hypothetical protein CLOSS21_00543 [Clostridium sp. SS2/1]
 gi|291560005|emb|CBL38805.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2]
          Length = 274

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 77/254 (30%), Gaps = 17/254 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDWK 57
           K   + ++   +L               +K        +  G       F     NG+  
Sbjct: 4   KKLMIEVMVFFVLGCFLC-ACGKTKDQTRKTTKDANKEIMIG-GDNYPPFNYTDENGNLA 61

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+F R     +   P    ++ ++ + +   ++  +ID +      T          
Sbjct: 62  GIDVEFAREAFHRMGYKP---VFVNIDWENKKNLVEQGKIDCIWACFSVTG---RENDYH 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +        Q   ++    I+ +S L    I VQ+ T  E            K   +   
Sbjct: 116 WAGPYMLSRQVIAVNDSSKINKLSDLKNKIIAVQSTTKPEELFLKQTDPKIPKVKQVYSM 175

Query: 178 RVEE-IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E I  +      DA      ++       +    + IL + I ++ +  A  + D  
Sbjct: 176 ENRELIYTSLSRGYVDAIAAHEISIRQYMSDFEAK--YRILDEDILETGIGVAFAKNDKR 233

Query: 237 -WYNIVSWTHYAMV 249
                +S T  AMV
Sbjct: 234 GIEKELSKTLKAMV 247


>gi|306841173|ref|ZP_07473889.1| extracellular solute-binding protein [Brucella sp. BO2]
 gi|306845331|ref|ZP_07477906.1| extracellular solute-binding protein [Brucella sp. BO1]
 gi|306274247|gb|EFM56059.1| extracellular solute-binding protein [Brucella sp. BO1]
 gi|306288799|gb|EFM60117.1| extracellular solute-binding protein [Brucella sp. BO2]
          Length = 272

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 74/245 (30%), Gaps = 10/245 (4%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               S L  + +   +    A  L DIK +G ++   +     F  +  NG ++G   D 
Sbjct: 5   RTLKSALFGLTVLGLAAPAMADQLSDIKAKGKIETATDMHYAPFDMLN-NGTYEGMTKDL 63

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  I  +P    Y  +        L+ K+ DI+      T  R      AF     
Sbjct: 64  FDGVAKEIGVEP---VYQDIPWTAELPGLEVKKFDIVIAPVTITPER--LDRYAFTLPIA 118

Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                 +       +     + G ++ VQ GT     L  Y K      +   +   +E 
Sbjct: 119 DATVSLVRAANNDALKKPEDIKGKTVGVQQGTAQFRQLEAYGKELG-GVNVKEYGTTDEA 177

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNI 240
            A   A R DA  G +  L  L                   +  A  + +      +   
Sbjct: 178 YADLAAGRLDAVAGSLPNLTYLVKNRPETFALFEPASFGQPTYFAWVLRKDADSDSFAKA 237

Query: 241 VSWTH 245
           V+   
Sbjct: 238 VNDAL 242


>gi|259046527|ref|ZP_05736928.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Granulicatella adiacens
           ATCC 49175]
 gi|259036692|gb|EEW37947.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Granulicatella adiacens
           ATCC 49175]
          Length = 283

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 89/279 (31%), Gaps = 31/279 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K   +  +  + +     +    +      +  L  G+  G   F       +NG  K
Sbjct: 10  MKK--ILGAIAALAMTVGLAACGTPVSQGTANQNQLVVGMEAGYPPFNWTQNDDSNGAVK 67

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV+  + ++  +  +   +  +         AL S +ID +      T 
Sbjct: 68  IQGTDQYAGGYDVEIAKRVAKQLGKE---LVIVKTEWDGLTPALVSSKIDAIIAGMSPTE 124

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+ +  + F    Y      ++ K       +S++  SGA +  Q  T     +     
Sbjct: 125 ERKAT--IDFTDSYYDSQLVLVVKKGSKYANATSLADFSGAKVTAQLNTFHYSVIDQIPG 182

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                      +    +  A ++   DAY  ++    + +  N      V L D    SP
Sbjct: 183 VDKQT----AMDNFPAMRVALQSGTIDAYVSELPEAISAQAANSDFV-MVKLTDGFKTSP 237

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
                   ++ D+     ++      +++EE     +N 
Sbjct: 238 EDTQTAVGVRKDSSLTKEINEALK-TISSEERQQIMENA 275


>gi|153208867|ref|ZP_01947089.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Coxiella burnetii 'MSU Goat Q177']
 gi|165920602|ref|ZP_02219573.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Coxiella burnetii RSA 334]
 gi|212218912|ref|YP_002305699.1| arginine-binding protein [Coxiella burnetii CbuK_Q154]
 gi|120575656|gb|EAX32280.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Coxiella burnetii 'MSU Goat Q177']
 gi|165916804|gb|EDR35408.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Coxiella burnetii RSA 334]
 gi|212013174|gb|ACJ20554.1| arginine-binding protein [Coxiella burnetii CbuK_Q154]
          Length = 269

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 9/199 (4%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     +K         +  +  +G  +GF  D  +A+   +    +             
Sbjct: 37  VFATDTIKFATEATYPPYVYMGPSGQVEGFGADIVKAVCKQM---QAVCTISNQPWDSLI 93

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASI 148
            +L+  + D L    + T  R+    + F    Y +   FI  K   ++ S   L G  I
Sbjct: 94  PSLKLGKFDALFGGMNITTARQK--EVDFTDPYYTNSVSFIADKNTPLTLSKQGLKGKII 151

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GTT +  L D F           +   E+      + R DA  GD   +      N
Sbjct: 152 GVQGGTTFDSYLQDSF---GNSITIQRYPSEEDALMDLTSGRVDAVVGDTPLIKQWLKQN 208

Query: 209 DRPSEHVILPDIISKSPLA 227
            R    +I   +   +   
Sbjct: 209 GRGEYVLIGKPVNDPNYFG 227


>gi|297190020|ref|ZP_06907418.1| glutamine-binding periplasmic protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297150336|gb|EDY62588.2| glutamine-binding periplasmic protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 329

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 12/219 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           + ++G L    +     F   +  G   GFDV     ++  +  +  KI   P    +  
Sbjct: 97  VVEKGKLTTCTHLPYPPFQFEQG-GKVVGFDVALIDLVAKNLDVE-QKILDTPFENFKTG 154

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GAS 147
             L S + D+ +     T  R+    + F    +   Q  +  KK G++S+ ++      
Sbjct: 155 AFLNSGECDLAAAGMTITEDRKK--NVDFSVPYFDATQALLATKKSGVTSLDEVKSGKKK 212

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +  QA TT E        A +  + P+ FE  + +    R  + DA   D   +      
Sbjct: 213 LGAQAETTGESY------AKSQGFDPVAFESSDAVINGLRTGQVDAVIIDYPVVQGWLKD 266

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               ++  +  +I +      ++ +G+ +    +     
Sbjct: 267 KANAAQFALGENIETGEQYGFSVKKGNDKLRAAIDKAIQ 305


>gi|293375082|ref|ZP_06621372.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
 gi|325841303|ref|ZP_08167404.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter
           sp. HGF1]
 gi|292646276|gb|EFF64296.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
 gi|325489984|gb|EGC92331.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter
           sp. HGF1]
          Length = 276

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 84/261 (32%), Gaps = 20/261 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKA----NGD 55
           M K      +CL +L   + S+N  S    IK+   +    +     +  +      +  
Sbjct: 4   MIKGLVFIGICLSVLGGCAQSSNETSRFDKIKETKKITMATSPDYAPYEFIDPTKSGSEQ 63

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  + ++  +  +   ++   ++      A+   + D+      +   R     
Sbjct: 64  YVGADIELGKYIAQKLGVE---LELKIMDFSAVLAAISEGKADMAISGLGYKPERAE--A 118

Query: 116 LAFRPITYF----DGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           + F          DG GF++  +      ++   +G SI  Q+ +  E  + D       
Sbjct: 119 MEFSEAYNTSEDGDGDGFLIRAEDVEKYKTLEDFNGVSIAAQSASLQEGYVKDQLP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                    + +     ++ + DA     S        N       +L +          
Sbjct: 175 NAQINTIASLSDGVLRVQSGKSDALAISYSTGEQYVNANKDLVMSSVLFEGNDSEGTMIG 234

Query: 230 IIQGDTEWYNIVSWTHYAMVT 250
           I++G+TE    ++     +  
Sbjct: 235 IVKGETELVEAINEIIQEVKE 255


>gi|77460036|ref|YP_349543.1| cyclohexadienyl dehydratase [Pseudomonas fluorescens Pf0-1]
 gi|77384039|gb|ABA75552.1| cyclohexadienyl dehydratase [Pseudomonas fluorescens Pf0-1]
          Length = 284

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 74/247 (29%), Gaps = 11/247 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   +    L +         AS L  I+++G L+         +   + +G ++G D+
Sbjct: 25  RKSTMIFCGLLAMAGAAQAQEPASHLDTIQQQGQLRVCTTGDYKPYTFKRPDGGFEGIDI 84

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
              + L+ ++      ++++    K     +Q+ + DI       TL R+     +    
Sbjct: 85  AMAQTLADSLGVK---VEWVQTTWKTLMPDMQAGKCDIGVGGISVTLERQKKAFFSNTLD 141

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERV 179
                       +    ++ Q++  ++ +      T E  +  +          +     
Sbjct: 142 VDGKIPLVRCADQSKYQTIDQINQPNVRLVEPAGGTNEAFVHAFLPKAQ-----LALHDN 196

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I      ++ D    D S     +         V     +     A  + + D  W  
Sbjct: 197 VTIFEQLLDNKADVMITDASE-ALYQQKLKPGLCAVNPSQFMQYGEKAYLLPRDDISWKL 255

Query: 240 IVSWTHY 246
            V    +
Sbjct: 256 YVDQWLH 262


>gi|322411105|gb|EFY02013.1| putative glutamine-binding periplasmic protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 522

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 86/296 (29%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A          +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSQAQADQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKIAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTD 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++    K    +S+   + A +  Q G      L     
Sbjct: 110 ERRK--EITFSNSYYTSEPVLVVAADGKYASATSLDDFANAKVTAQQGVWHVNLLTQLKD 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  +       +         
Sbjct: 168 AKLQT----PMGDFSQMRQALSSGVIDAYISERPEAMTAESADSHFKIITLKKGFTVSES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + +      V+         + + +    I +   +  + D +  FLG
Sbjct: 224 DAAIAVGMKKNDNRIATVNQVLEGFSQTDRMALMDDMITKQPMEKKDEDAKPSFLG 279


>gi|290512275|ref|ZP_06551642.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino
           acid-binding protein [Klebsiella sp. 1_1_55]
 gi|289775270|gb|EFD83271.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino
           acid-binding protein [Klebsiella sp. 1_1_55]
          Length = 243

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 73/219 (33%), Gaps = 11/219 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G  T    F          GFD+D   AL   +    ++ Q+          AL+ 
Sbjct: 22  TLHFGTTTANPPFVTANGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    +   +RE  +   F         G ++  K    + + L    I V  GT
Sbjct: 79  KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVIVNKDVAHTFADLKAKKIGVVKGT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212
             +  L +  KA       I ++ V    AA +A        D + L A +  N      
Sbjct: 137 LHQHYLRNKQKA----VQAIPYDDVASALAALKAGEITGVMSDFATLDAWQQENPDYAIM 192

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           +             A A+ + DTE  N ++    A++  
Sbjct: 193 DERATDPAYYGKQYAIAVRKDDTELLNAINDALTAVMAT 231


>gi|258645824|ref|ZP_05733293.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Dialister invisus DSM 15470]
 gi|260403194|gb|EEW96741.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Dialister invisus DSM 15470]
          Length = 279

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 85/265 (32%), Gaps = 31/265 (11%)

Query: 1   MY---KDFFVSILCLIILFFTSFS------------TNASILGDIKKRGFLKCGINTGLV 45
           M    +   + +  +  L  +                  +++  IK++G +  G ++G  
Sbjct: 1   MKHAVRSAILGLAAVCALAISGCGDSSRTAAPQNAQAQGNLMQKIKEKGKIVVGTSSGYP 60

Query: 46  GFAEVKA---NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
            +  V A        G D++  + ++  +      ++   +       ++ + ++DI   
Sbjct: 61  PYVFVDAASGEKKVIGLDIELAQQIADKLGVK---LEVQDMGFSALLSSVTANKVDIAVG 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTL 160
               T  RE ++   F        Q  ++ K       + + L GA I  +  TT E   
Sbjct: 118 GIFPTAEREKAMA--FSKSYLPTEQKLLIKKDDAAKYKTAADLKGAVIGAEKSTTQEAAA 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                A       +    V +     +  + +    +   +    L  +       +   
Sbjct: 176 QKVEGAK-----SVGLTSVPDAVLELKHGKLNGIIIE-GIVARQYLIFNPDLVLADVTFP 229

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTH 245
            +K   A A+ +G+ +   +++   
Sbjct: 230 DAKKLSAVALQKGNDDLVKLINDVI 254


>gi|116670531|ref|YP_831464.1| extracellular solute-binding protein [Arthrobacter sp. FB24]
 gi|116610640|gb|ABK03364.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 288

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 72/217 (33%), Gaps = 11/217 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G ++         +    A G++ GFDV+  + ++     D   + +   +      A+ 
Sbjct: 48  GTIRVASLGDSKPYTFADAQGNFTGFDVELFKDVAHRAGVD--NVVFTGQDFSGLLSAVA 105

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + Q D+       T  R+ +  + F           I  K  GI     LSG  + V  G
Sbjct: 106 NGQFDVGVAAIGITDKRKET--VEFSDGYLAGYLTVITTKTSGIKDAEGLSGKRLGVVQG 163

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E      F +       + F       AA  +   DA+  D     A K   ++   
Sbjct: 164 TLQEAYAVKNFTSA----SLVRFPDNNTAIAAVNSGTVDAHFLD---YEAAKAYEEQHGL 216

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                     +P   AI +G T + + ++    A + 
Sbjct: 217 VSAADIPSFDAPAGFAIAKGKTAFRDALNKGLAAAME 253


>gi|163747859|ref|ZP_02155195.1| extracellular solute-binding protein, family 3 [Oceanibulbus
           indolifex HEL-45]
 gi|161378860|gb|EDQ03293.1| extracellular solute-binding protein, family 3 [Oceanibulbus
           indolifex HEL-45]
          Length = 252

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 83/246 (33%), Gaps = 20/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +   +    +F+ +            L+ G++ G   F  VK + + +GF+
Sbjct: 1   MLKQIVTATVLAAVSGTAAFAQDNDT---------LRVGMSGGYFPFTFVKLD-ELQGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+         ++++  +       AL + +ID ++     T  RE     AF  
Sbjct: 51  VDVMNAVGKETG---LEVEFETMAFSGLIGALDAGRIDTIANQITITPEREE--KFAFTA 105

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              FDG   +       I  V  L G ++ V  G+  E  L     A   +     +E  
Sbjct: 106 PYVFDGAQVVTKIGNEEIGGVEDLRGKTVAVNLGSNFEQLLNGLDFA--DEIEIKTYESN 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
              D A    R DA+  D  +   L   +  P +    P    ++ L            +
Sbjct: 164 IAQDTAL--GRVDAFVMDRVSSAQLIQESPLPLQLAGKPFSEIRNALPFQDNDEGRALRD 221

Query: 240 IVSWTH 245
            V    
Sbjct: 222 RVDTAL 227


>gi|222106919|ref|YP_002547710.1| ABC-type amino acid transport/signal transduction periplasmic
           protein [Agrobacterium vitis S4]
 gi|221738098|gb|ACM38994.1| ABC-type amino acid transport/signal transduction periplasmic
           protein [Agrobacterium vitis S4]
          Length = 275

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 68/224 (30%), Gaps = 8/224 (3%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  +     L  IK  G LK G  T    F  + A GD  G +VD    +   +      
Sbjct: 20  SLSAHAEDALMKIKAAGTLKVGTETAFAPFDFIDA-GDHVGLNVDLFAEIGKELGVK--- 75

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           ++++ L        L++ + DI++     T  R       F           +       
Sbjct: 76  VEWIALPWDGVLPGLEAGKFDIVAGPATVTKAR--MERYRFTAPIAEATVAILKKAGDKT 133

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+    L+G S+ V   T     L +       K     +    +  A   A R  A   
Sbjct: 134 ITKPEDLAGKSVGVGKATAQLAQLQELSATLPKKIDVREYVSFNDAYADMAAGRVVAVAN 193

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  +          +  V++P    KS  +    +       I
Sbjct: 194 SLPNIA-FVAKQRNGAFEVVVPPFGKKSYFSFVGTKDADHASLI 236


>gi|199599468|ref|ZP_03212860.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|199589640|gb|EDY97754.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
          Length = 488

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 18/278 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +     G +     F     +  + G D+D  +A++     +  K++  PL       A
Sbjct: 33  AQKTYTIGTDVTFAPFEFANQDNKYVGIDLDLIKAIAKE---EGFKVEIKPLGFNAAVQA 89

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++KQID +      T  R+           Y  G    + KK  I S+  L G  + ++
Sbjct: 90  LEAKQIDGVIAGMSITPERK--QKFLMSDPYYKSGVVMAVAKKSTIKSLKDLRGKRVAIK 147

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +              +  + F+    +          A   D   +   +   +  
Sbjct: 148 TGTDSADYANSI--KQKYGFTTVTFDDSNNMYQDVITGNSAACFEDQPVM---QYGINNG 202

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
               ++     +     A  + +    +  +           Y  +    LG       +
Sbjct: 203 MALKLVGKPAREGSYGFAASKNNQALISKFNTGLKKLRANGQYDKIIEHYLGNGSAESQK 262

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            +   +    + F+G+ K++      GL +     I+ 
Sbjct: 263 TAAGNSQTTDRSFIGLLKANWSTLMGGLRETMVLTIVA 300


>gi|156932772|ref|YP_001436688.1| hypothetical protein ESA_00562 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531026|gb|ABU75852.1| hypothetical protein ESA_00562 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 75/218 (34%), Gaps = 8/218 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G       F    +    +GFD+D  +A++ A   +   ++ +    +  F  L S
Sbjct: 30  TYVVGAGGTYRPFEFENSQKQLEGFDIDIIKAIAKA---ENFNVKLVNTPWEGIFATLGS 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              DI+      T  R+    + F    +   Q  ++     + S++ L    + V   +
Sbjct: 87  GDRDIIISGITITDKRKQM--VDFSAPYFPAEQSIVVAADSKVDSLAALKNEKVGVVNSS 144

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T ++ ++D    +N       F+    +          A  GD+  +      +      
Sbjct: 145 TGDIVVSDVLGKNNTA--IKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQHPEKQFK 202

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           ++      +     A+ +G+ E  + ++    A + A+
Sbjct: 203 LVPDAKFERQYFGIAVAKGNDELRDKINAGL-AKIVAD 239


>gi|33151969|ref|NP_873322.1| arginine ABC transporter, periplasmic-binding protein [Haemophilus
           ducreyi 35000HP]
 gi|33148191|gb|AAP95711.1| arginine ABC transporter, periplasmic-binding protein [Haemophilus
           ducreyi 35000HP]
          Length = 239

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 85/256 (33%), Gaps = 36/256 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L +  L  T+                L   +      F      G+  GFD
Sbjct: 1   MKKLLLASVLSVSTLSLTA--------------KELTFAMEPTYPPFEVTNQQGEIVGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +          A++ K+ID      D T  R     +AF  
Sbjct: 47  VDIANAICHEI---QATCHFKGQAFDALIQAVKQKRIDAAISAIDITDAR--MKQVAFTH 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     +I VQ GTT +  +    K    +Y    +  ++
Sbjct: 102 TYYDSSASFIAIKGKTDLTKA----KNIGVQNGTTFQQYVMAEAK----QYVAKSYNSLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D   GD + L  +     +  +   + D ++         A A+ + + 
Sbjct: 154 DAVLDLKNGRIDMIFGDSAVLADM---LSKDQDLNFVGDKVTNEKYFGNGVAIAVNKANM 210

Query: 236 EWYNIVSWTHYAMVTA 251
              + ++    A + A
Sbjct: 211 ALVDELNQGL-ATIKA 225


>gi|312866341|ref|ZP_07726559.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
 gi|311098035|gb|EFQ56261.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
          Length = 275

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 77/250 (30%), Gaps = 15/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58
           M     V +  + +      +   S     K  G   +          F+    + +  G
Sbjct: 1   MKLKNIVKLGAVAVASVAILAACGS-----KSSGKETVNFATVGTTNPFSYEDKDSNLTG 55

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D++  +A+         ++++        F  L S +  +   N      ++ +    +
Sbjct: 56  YDIEVAKAVFK--GSKKYEVKFKKTEWSSVFDGLGSGKYQMAGNNIS--YDKDRAKRYLY 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF-- 176
              T        + K   I S   + G S  V  GTTT   L DY K H+     I +  
Sbjct: 112 SEPTGTTPTVLTVGKDSDIQSFDDIGGHSTQVVQGTTTAKQLEDYNKKHSDNQVKINYTE 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235
           E + +I  +    + D    D   + A+   +   S    +     + P +         
Sbjct: 172 EDIPQILRSLNDGKFDFKLFDAPTVNAVI-KSQNLSNLKTIDVPSDQKPFIYFVFSNDQK 230

Query: 236 EWYNIVSWTH 245
           +    V+   
Sbjct: 231 DLQKFVNKRL 240


>gi|283783517|ref|YP_003374271.1| extracellular solute-binding protein [Gardnerella vaginalis 409-05]
 gi|283442108|gb|ADB14574.1| bacterial extracellular solute-binding protein, family 3
           [Gardnerella vaginalis 409-05]
          Length = 302

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 79/276 (28%), Gaps = 43/276 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD----------------------------IKK 32
           M+K      +   ++   S +                                    + K
Sbjct: 1   MFKSMKPVAIVASLVMIGSIAACGPADSKEADPDVARSYDVSHVQKDDAVAVLVPAPVAK 60

Query: 33  RGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            G L  G+N          A+G    G+++DF +AL+  +       + +         A
Sbjct: 61  TGELTVGVNVSYAPAEFFAADGKTPVGYEIDFSKALAKVMGLKA---KIMHAQFDSIIPA 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICV 150
           + S + ++          R     + F       G  F + K          L G  + +
Sbjct: 118 IGS-KYNVGISGFTVNAER--MKSVDFI-TYANAGLSFEVRKGNPTKVDPKNLCGKKVTL 173

Query: 151 QAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           + GT  E  + +         N     + F+   +   A  + R D    D     A   
Sbjct: 174 ETGTVGEPIMEEAKKQCAAKGNKPLEIMSFKEQTDATTALLSGRADVMYADTP--VAGYA 231

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           +   P +  IL +     P+  A+ +GD      V 
Sbjct: 232 SIKNPGKLEILENSKDSEPMGAAVKKGDAAMLKAVK 267


>gi|259651117|dbj|BAI43279.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 487

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 18/278 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +     G +     F     +  + G D+D  +A++     +  K++  PL       A
Sbjct: 32  AQKTYTIGTDVTFAPFEFANQDNKYVGIDLDLIKAIAKE---EGFKVEIKPLGFNAAVQA 88

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++KQID +      T  R+           Y  G    + KK  I S+  L G  + ++
Sbjct: 89  LEAKQIDGVIAGMSITPERK--QKFLMSDPYYKSGVVMAVAKKSTIKSLKDLRGKRVAIK 146

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +              +  + F+    +          A   D   +   +   +  
Sbjct: 147 TGTDSADYANSI--KQKYGFTTVTFDDSNNMYQDVITGNSAACFEDQPVM---QYGINNG 201

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
               ++     +     A  + +    +  +           Y  +    LG       +
Sbjct: 202 MALKLVGKPAREGSYGFAASKNNQALISKFNTGLKKLRANGQYDKIIEHYLGNGSAESQK 261

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            +   +    + F+G+ K++      GL +     I+ 
Sbjct: 262 TAAGNSQTTDRSFIGLLKANWSTLMGGLRETMVLTIVA 299


>gi|91781138|ref|YP_556345.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693798|gb|ABE36995.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 283

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 13/249 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
           +   +  + L+   + + +   + L  IK RG L  G+      +  +        G++V
Sbjct: 11  RLSMLVSIALVGGSWLNTAHADATLDRIKSRGTLVVGVVLDGT-YGSLDPVTRKPVGYNV 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   +L+S +      ++   +    R   LQ  ++D+L  +  +T  R+  L     P 
Sbjct: 70  ELGESLASHLGVKFEAVE---VTPPNRVQFLQQGKVDVLIASMQYTKERDEILSYVPTPF 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               G   +  K  GI     L    +CV  G+     L + + A         F+ + E
Sbjct: 127 EQIGGSAMVH-KGSGIHDWKDLRDKPVCVSQGSNYTKPLIEQYGA-----QVKAFKGMPE 180

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDTEWYN 239
              A R   C A       + A   ++    +    P    +  SP    + +G T+   
Sbjct: 181 ALLALRGGSCVASVHVTPGIQARLASSSGEWKDYESPIATQLVPSPSVIWVRKGQTDTVA 240

Query: 240 IVSWTHYAM 248
            +       
Sbjct: 241 ALDRIVKNW 249


>gi|2599566|gb|AAB84169.1| hypothetical protein [Rhodospirillum rubrum]
          Length = 167

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 6/150 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIF 72
             S       L  IK+ G +  G     + F+ +  N    G+ +D C     A+ + + 
Sbjct: 19  SASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELK 78

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            D   ++  P+ +  R   + +  +D+   +T   L  +     +F    +     F+  
Sbjct: 79  LDTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNL--DRQQQASFTNSHFLTASRFVSK 136

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLAD 162
           K   + S+  L G ++   AGTT    + +
Sbjct: 137 KTSNLKSIDDLKGKTVVSTAGTTNIKQVNE 166


>gi|319939264|ref|ZP_08013627.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
 gi|319811660|gb|EFW07936.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
          Length = 727

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 68/210 (32%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L+ LF    + +A           +K   +T    F    ++  +KG D
Sbjct: 1   MKKKIITFLLALLPLFAV-TAIHADT---------IKVVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   I            A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAELKGWD---INMTFPGFDAAVNAVQSGQADAIMAGMTKTKDREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   ISS SQL G ++ V+ GT ++  L      +  K+    F+  +
Sbjct: 106 TYYDTKVVIATTKANTISSYSQLKGKTVGVKNGTASQRFLEKI--KNKYKFTIKTFDTTD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               +  +   DA   D   +         
Sbjct: 164 LTYNSLNSGSIDAMMDDQPVIEYAIKQGQN 193



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 13/193 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
                 ++    F    +N  + G D+D  +A++         I+           A+QS
Sbjct: 272 TYTIASDSSFAPFVFQDSNNKYTGIDMDLIKAIAKD---QGFTIEITNPGFDAALNAVQS 328

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R+ +    F    Y       +     I+S   L G +I V+ GT
Sbjct: 329 GQADGMIAGMSVTDARKET--FDFSEPYYTANAILAVKGSSTIASYKDLKGKTIGVKNGT 386

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            ++  L +    +   Y    F     +  +  +   +A   D   +        +    
Sbjct: 387 ASQTFLTEN--QNKYGYKIKTFADASSMYDSLNSGSVNAVMDDEPVVKYSISQGQK---- 440

Query: 215 VILPDIISKSPLA 227
             L   I  +P+ 
Sbjct: 441 --LKTPIKGTPIG 451


>gi|107022814|ref|YP_621141.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116686946|ref|YP_840193.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105893003|gb|ABF76168.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652661|gb|ABK13300.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 270

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 68/212 (32%), Gaps = 21/212 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGF 59
           M          L +L     S  A           L+ GI+      F    A G WKG+
Sbjct: 8   MRSRVRRVAAALFVLGLAPVSHAAQP--------TLRVGIDAESYPPFFSKDAGGKWKGW 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    L +A      + +   +       ALQ+++ID++  +   T  R+    + F 
Sbjct: 60  EIDV---LDAACGKLNVRCELTDIAWDGLIPALQNRKIDVIWSSMTITGERQK--AIDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
              Y     F+  K               G+ I V+AGT     L   FK          
Sbjct: 115 RAYYESPTVFVGAKSDRRRVDCAVPTTFKGSVIGVEAGTNFSAFLDARFKQ---DAQIKA 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           F++ +   A   + R D          A   +
Sbjct: 172 FDKFDNALADLVSGRVDYVQEGKGLFTAFLAS 203


>gi|322411140|gb|EFY02048.1| ABC transporter substrate-binding protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 280

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 15/208 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++ +  + +      +   S      + G       +          F+  + +G
Sbjct: 1   MIKKQYLGMATIALASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKDG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G S  V  GTT+   L  + K H+ K   +
Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSYDDIEGHSTQVVQGTTSVAQLEAFNKEHSDKPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISA 200
            F      +I       + D    D   
Sbjct: 174 KFTNENITQILTNLSEGKADFKIFDAPT 201


>gi|237669719|ref|ZP_04529696.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237654793|gb|EEP52356.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 265

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 18/245 (7%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILGDI----KKRGFLKCGINTGLVGFAEVKA 52
           M K   +S +      + L     S NA    +      K G      +     F+  + 
Sbjct: 1   MKKSKILSAVMASVLSVALLTGCGSANAGGSKESSTGEAKEGKYIIACDAKYAPFSF-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG +KG DV+   A++     +       P++ +     L S Q+D        T  R+ 
Sbjct: 60  NGSYKGIDVELLDAIAKEEGFEYE---LKPMDFQAVIPGLTSGQLDGAIAGISITDERK- 115

Query: 113 SLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              L F    +  G    +  K   I+    L G S  V+ GT       +   A     
Sbjct: 116 -QALDFSDGYFESGLSLVVNAKNTDINGEDDLQGKSAAVKKGTAGSQFAEEN--ADKYDL 172

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                E    +         D    D   +   K+  D  S+  I  D ++K     A+ 
Sbjct: 173 KLNYLEDSPTMFLEVENGNSDFLLEDYPVIA-YKIKVDGGSKLRIAGDKLTKVDYGFAVS 231

Query: 232 QGDTE 236
           +G  +
Sbjct: 232 KGKNK 236


>gi|297582813|ref|YP_003698593.1| family 3 extracellular solute-binding protein [Bacillus
           selenitireducens MLS10]
 gi|297141270|gb|ADH98027.1| extracellular solute-binding protein family 3 [Bacillus
           selenitireducens MLS10]
          Length = 290

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 78/262 (29%), Gaps = 24/262 (9%)

Query: 4   DFFVSILCLIILFFTSFSTNA-------------SILGDIKKRGFLKCGINTGLVGFAEV 50
               ++L   +L     + +              S   +I++ G L    +  L   +  
Sbjct: 10  KTAAAVLTTGLLLTACGNGDGNETASDNDTGGEPSSWDEIEESGVLTVATSGTLYPTSFH 69

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +    GF+V+  R  +  +     ++++  +       ++ S Q+D+   + D    R
Sbjct: 70  DEDEGLTGFEVEVTREAAERLG---LEVEFTEMGFDGMLTSINSGQVDLAVNDIDINEDR 126

Query: 111 EISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           E      F     F     I+      GI ++  L G      A TT  + +A+ + A  
Sbjct: 127 EE--RFLFTDPYKFSYGAMIVRPDDFSGIETLEDLEGKKHG-GAATTIYMQIAESYGAEG 183

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           + Y  +     +         R D    D                 +        +  A 
Sbjct: 184 VTYENV---TNDTYLRDIENGRLDVVMNDFYLQSLAIEALPEIDVVIHPDLFYHPNNQAM 240

Query: 229 AIIQGDTEWYNIVSWTHYAMVT 250
            + +   E    ++     M+ 
Sbjct: 241 IMKEDSHELQEQLNRVIAEMME 262


>gi|114771228|ref|ZP_01448648.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [alpha proteobacterium HTCC2255]
 gi|114548153|gb|EAU51040.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [alpha proteobacterium HTCC2255]
          Length = 256

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 17/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K F  + + ++ +  +      S L +I   G LK G                 +KGF
Sbjct: 1   MNKFFKAATIAIMGIVLSGAVNAQSALNEILSSGVLKVGTTGDWNPMTVRDPATNSYKGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +  +   I+++P + K     + + Q   ++ +   +  R  + G  F 
Sbjct: 61  DIDIMEELAKDLGVE---IEFVPTDWKTLVNGVVAGQYH-ITGSASVSPARMKAAG--FS 114

Query: 120 PITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                        K+              G  +    GT+ E  +  ++          V
Sbjct: 115 ESYISVEFIPFTAKENAGKFDGHDAINQPGVKVATTLGTSFEKLVRAWYPKA----DIKV 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E          A R D +         L+         V   +  S +P+A  + Q D 
Sbjct: 171 VEAPARGYQEVLAGRADVFITSNIEGATLQEKFG--VVRVKNAEARSPTPIAMLLPQTDQ 228

Query: 236 EWYNIVSW 243
            W N V+ 
Sbjct: 229 VWINYVNN 236


>gi|109947817|ref|YP_665045.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter acinonychis str. Sheeba]
 gi|109715038|emb|CAK00046.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter acinonychis str. Sheeba]
          Length = 257

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 73/250 (29%), Gaps = 14/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L L I F   F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKK---ISCLLLAISFLLDFLNASSLYERLVNKETISVGTEGIYPPFTYHDKEGKLTGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R L+  +      I++   +       L+S + D+++     T  ++         
Sbjct: 58  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 113

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    I  +  + G        +T          A       +  + +
Sbjct: 114 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +        R D       A+     T+      +           +  I +   +   
Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 227

Query: 240 IVSWTHYAMV 249
           ++      ++
Sbjct: 228 LIDKAMQKLI 237


>gi|317498079|ref|ZP_07956382.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894667|gb|EFV16846.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 274

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 77/254 (30%), Gaps = 17/254 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDWK 57
           K   + ++   +L               +K        +  G       F     NG+  
Sbjct: 4   KKLMIEVMVFFVLGCFLC-ACGKTKDQTRKTTKDANKEIMIG-GDNYPPFNYTDENGNMA 61

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+F R     +   P    ++ ++ + +   ++  +ID +      T          
Sbjct: 62  GIDVEFAREAFHRMGYKP---VFVNIDWENKKNLVEQGKIDCIWACFSVTG---RENDYH 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +        Q   ++    I+ +S L    I VQ+ T  E            K   +   
Sbjct: 116 WAGPYMLSRQVIAVNDSSKINKLSDLKNKIIAVQSTTKPEELFLKQTDPKIPKVKQVYSM 175

Query: 178 RVEE-IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E I  +      DA      ++       +    + IL + I ++ +  A  + D  
Sbjct: 176 ENRELIYTSLSRGYVDAIAAHEISIRQYMSDFEAK--YRILDEDILETGIGVAFAKNDKR 233

Query: 237 -WYNIVSWTHYAMV 249
                +S T  AMV
Sbjct: 234 GIEKELSKTLKAMV 247


>gi|226940537|ref|YP_002795611.1| amino acid ABC transporter, periplasmic-binding protein [Laribacter
           hongkongensis HLHK9]
 gi|226715464|gb|ACO74602.1| probable amino acid ABC transporter, periplasmic-binding protein
           [Laribacter hongkongensis HLHK9]
          Length = 262

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 67/228 (29%), Gaps = 14/228 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +L  +++RG L   +      F          GF+V+  + L+  +        +  
Sbjct: 21  AADLLQTVQQRGQLNIAVEGTYPPFNFRNRQQQLTGFEVELGQELARRLGVKA---HFTT 77

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSV 140
                    LQ+ + DI+      T  R       F           I+ +     + SV
Sbjct: 78  GEWSALLAGLQAGKSDIVLNQVAVTEARRKV--FDFSQPYTISSAQLIVRQDDNRPMDSV 135

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L G +I V  G+                     +    E        R DA   + S 
Sbjct: 136 AALMGKTIGVAQGSNYAE-----LAKSLPGVTVKTYPGAPEYLQDLATGRIDA-ALNDSL 189

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L    +   R      LP +   S +A    +G+  +   +      M
Sbjct: 190 LIPFAIKTARLPLKPGLP-LGGLSHMAIPFAKGNPAFQTAIDKALTGM 236


>gi|311898326|dbj|BAJ30734.1| putative ABC transporter substrate-binding protein [Kitasatospora
           setae KM-6054]
          Length = 318

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 16/241 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I+  G L+ G +            G   G DVD   AL   +      +Q+  +    
Sbjct: 59  AQIRSAGVLRIGADLTYAPIGFKAEGGAPDGLDVDLANALGGLLGVK---VQFSDVPFDR 115

Query: 88  RFLALQSKQIDILSRNTDWTLL---------REISLGLAFRPITYFDGQGFIMH-KKKGI 137
             L LQ+ + D++                  R+++ GL F           +     + I
Sbjct: 116 LRLGLQAHEYDLVMSGMTDNPQRRDGTDDQARKVNDGLDFVDYFVTGTSIVVAKGNPQKI 175

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKA---HNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           + +  L G ++ +Q  T   + +     A      K      E  ++  A     +  A 
Sbjct: 176 AKLDDLCGKTVALQRDTVQAVLVERQVGACQKTGRKLTVTETETDDQALALVAQGKAAAD 235

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D               +  ++   +  +P   A  + D+   + +      ++ + E 
Sbjct: 236 LNDTPVAQHAVKNGRAGGQFQVVGPELQVAPYGIAFAKEDSALRDAMVKALDQLIRSGEY 295

Query: 255 G 255
            
Sbjct: 296 D 296


>gi|149202378|ref|ZP_01879351.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. TM1035]
 gi|149144476|gb|EDM32507.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. TM1035]
          Length = 253

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 74/219 (33%), Gaps = 10/219 (4%)

Query: 35  FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +K GI       FA + ++G W G++VD   A+  A           P+       +L 
Sbjct: 23  EVKIGIAAEPYPPFASLDSSGTWVGWEVDVIDAVCKAA---DLTCVITPVAWDGIIPSLT 79

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
             QID +  +   T  R     + F    Y      +  K   +  +   L G  + VQA
Sbjct: 80  GGQIDAIMASMSITEER--MKTIDFSDPYYNTPTVVVADKSLDLEATPEGLKGKILGVQA 137

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T  +    +YFK         +++  +E +    A R DA   D  A+     T+    
Sbjct: 138 STIHQAYAQEYFKDA---AEIRIYQTQDEANQDLVAGRIDATQADSIAMADFVATDAGAC 194

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             +        + L   +  G  +  + +       + A
Sbjct: 195 CEIKGNVADDPAILGLGVGAGVRKGEDALREALNKGIAA 233


>gi|330891102|gb|EGH23763.1| putative ABC transporter exported solute-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330985962|gb|EGH84065.1| putative ABC transporter exported solute-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 279

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 83/239 (34%), Gaps = 10/239 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69
            L ++     +   + L  I +R  +  G+      F  +    GD +G++V+  + L+ 
Sbjct: 12  ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +  D   +    + A  R   LQ  ++D+L  N  +T  R   L     P     G   
Sbjct: 72  RLSVDLETVS---VLAPNRVQFLQQGKVDLLIANMQFTEERAQILDYVPTP-YEEVGGAA 127

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K  GIS    L G  +CV  G+     L + + A         F    E   + R +
Sbjct: 128 LVRKGSGISMWEDLKGKPVCVSQGSNFIKPLQELYGA-----QIKAFRSQSESLLSLRGN 182

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            C A       +  L    +     + +P  +  S     + +G+ +    +       
Sbjct: 183 GCVAAVHVSPTMRTLLSEKEWSGYEIPVPTDLIPSSSVIWVRKGEHDIQARLDAIVRDW 241


>gi|328887311|emb|CCA60550.1| serine or threonine protein kinase [Streptomyces venezuelae ATCC
           10712]
          Length = 652

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 8/209 (3%)

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              G  +   +G   GFDVD    ++ A+   P+ I +  +        L   ++D++  
Sbjct: 427 DAPGLGQTNLDGSHSGFDVDVATHVARALGHAPADITWREVRGITPEALLTGGEVDLVVA 486

Query: 103 NTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                  R+    + F    +       +      + + + L+  +IC    +++ L + 
Sbjct: 487 TFTINATRKE--KVDFVGPYFVAHQDVLLPTGDTSVRTPTDLNDKTICSAINSSSALVIE 544

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                  +          E+          DA + D + L              +    +
Sbjct: 545 RVAPRALVAGRF----GHEQCVIDLAQGSADAVSTDDALLAGFAAQPKFKGRFKLAGFRL 600

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +  P    + +G       V     AM+ 
Sbjct: 601 TDEPYGIGLPKGSP-LRAEVRKALEAMIA 628


>gi|330833724|ref|YP_004402549.1| putative amino acid ABC transporter substrate-binding protein
           [Streptococcus suis ST3]
 gi|329307947|gb|AEB82363.1| putative amino acid ABC transporter, substrate-binding protein
           [Streptococcus suis ST3]
          Length = 283

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 80/220 (36%), Gaps = 8/220 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+  +  G       F+    NG+  GFD++  RA+      D  ++ +   +   +F  
Sbjct: 39  KKETIVMGTVGTTKPFSYRDENGELTGFDIELARAIFD--GSDQYELTFETTDGSGQFPG 96

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S + D+L  NT +T  R       +   T        + K   I S   + G S  V 
Sbjct: 97  LDSGRFDLLGNNTSYTKER--GEKYLYSYPTASTPSVLAVPKDTDIQSYDDIGGHSTQVV 154

Query: 152 AGTTTELTLADYFKAHNMKYHPIVF--ERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            GTTT   L +Y   H  K   I +  E + +I       + D    D   + A+   + 
Sbjct: 155 TGTTTAAQLEEYNTQHTDKPVDINYTGENITQILTNINDGKYDFKIFDAPTVNAIIA-DQ 213

Query: 210 RPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAM 248
             +    +    ++ P +       +T   + V+    A+
Sbjct: 214 NLTNLKTIELEAAEKPFIYYVFSSDNTALQSFVNDRIKAL 253


>gi|85059290|ref|YP_454992.1| amino acid ABC transporter periplasmic component [Sodalis
           glossinidius str. 'morsitans']
 gi|84779810|dbj|BAE74587.1| amino acid ABC transporter periplasmic component [Sodalis
           glossinidius str. 'morsitans']
          Length = 271

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 72/240 (30%), Gaps = 14/240 (5%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
           C++   F + + +   L  +K+ G L          F+   A+G   G ++   + ++  
Sbjct: 18  CMMTPLFGARAADEGQLE-LKQPGKLSVATEGTDPPFSMRSADGKLDGLEIRVMKEVAKR 76

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   +           + LQ+ Q D+ S   D T        + F       G   I
Sbjct: 77  LQLEYVPVI---TKWDSVLVGLQANQFDMSSAAMDITPA--WQKAILFSDGWIESGGRII 131

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + +   I+S   L G  I  Q  +T      D+            +  V  +        
Sbjct: 132 IPQDSSITSAQDLKGKRIGAQVSSTYAQLAVDHCA------TLKNYIDVTAVVQDLANGN 185

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D    D      L      P      PD +S+     A  +        V+     MV 
Sbjct: 186 IDGVINDSIGNAYLIKDMHLP--LRQTPDYVSRIQKGFAFTKNKPHLAAPVNKALAEMVA 243


>gi|300698248|ref|YP_003748909.1| amino-acid-binding ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
 gi|299074972|emb|CBJ54541.1| putative amino-acid-binding ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
          Length = 283

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 83/261 (31%), Gaps = 16/261 (6%)

Query: 2   YKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            ++F    L         T+       + DIKKRG L  G       F  V  NG   GF
Sbjct: 6   RRNFLRLALGTGAAFALPTTAFAEGGSIVDIKKRGKLVVGTEAAYEPFEFV-ENGQVVGF 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    ++  +  +  ++    L  +     L S + D ++ +   T  R       F 
Sbjct: 65  GRDILVLMADKLGVELEQMN---LPFQGLLPGLLSHKFDFVATSVSITPERAKRFA--FS 119

Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-----HP 173
                     +       I+    L+G  +  Q G++++     + K    +        
Sbjct: 120 QPVGVVRPVLMARVDDTSITRALDLAGKVLGTQMGSSSQPAAEQFEKTLKEQRGKGYADT 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +F+   ++  A      D     I +  A      +P    I+ ++     LA      
Sbjct: 180 KLFQAYPDVAIALSNKTVD--VAFIPSNVAAIQMRKQPGAFKIVGEVGQPRLLAWVANPQ 237

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           D E    ++ T   +  + +L
Sbjct: 238 DLEIRKFINDTLDELRASGKL 258


>gi|197337777|ref|YP_002157985.1| ABC transporter amino acid-binding protein [Vibrio fischeri MJ11]
 gi|197315029|gb|ACH64478.1| ABC transporter amino acid-binding protein [Vibrio fischeri MJ11]
          Length = 269

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 14/232 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + + N   L  I++RG LK G++T  V +A     G+  GF+VD  + L+        KI
Sbjct: 23  TTTDNTPNLDKIQERGTLKVGLST-FVPWAMRNQQGELIGFEVDVAKRLAEDSG---LKI 78

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI- 137
           +++P        +L S + D++      T  R  S  + F       G     +K+    
Sbjct: 79  EFIPTAWDGIIPSLISGKFDVIIGGLTITDER--SKSVLFTVPYSHSGVQVAANKELTDG 136

Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
                          + G+ T   + ++F         + F+   +           A  
Sbjct: 137 FTREDFNSRRVKFAARRGSITVAAIKEHFPKAK----VLQFDDEAQAFQEVLNGNAHAVA 192

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
                     L +     ++   + +S+   A A+  G+ +          A
Sbjct: 193 ASTPKPEFDTLKHAD-ILYLPFKERLSQGNEAFAVRLGEEDKKAYFDEWIKA 243


>gi|170743614|ref|YP_001772269.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168197888|gb|ACA19835.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 281

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 83/236 (35%), Gaps = 11/236 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V+ +    L  +S       L +I  RG ++ G+      ++    +G  +G +
Sbjct: 7   MRTIVVVAAVLGGGLVASSAGAAEGRLKEILDRGVVRVGVQGAFKPWSFPAPDGTLQGIE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  ++++  +      +      +  R   LQ  +ID++         R   +G+   P
Sbjct: 67  VELAKSVADTLGVKLEPVII---TSANRIQYLQQGKIDLILGGMYDASDRRKIIGMI-EP 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   +  K   I     ++   +C + G      +     A+      I F    
Sbjct: 123 AYWSSGPTLLAKKG-AIKDWKDIANKPVCGKQGNYYNKQVQTELHAN-----LIAFAGNT 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E     RA +C A+  D  ++ A          + +   ++  +P A A+   + +
Sbjct: 177 EGKEGLRAGKCVAWLYDDVSIMADLA-LPEWEGYEMPVPVLYNNPWAAAVPLDERD 231


>gi|289168772|ref|YP_003447041.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
 gi|288908339|emb|CBJ23181.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
          Length = 276

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 12/253 (4%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N+    F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVSAGVLAACSGGAKKEGEAASKKEIIVATNSSPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVNNISYTKERAEKYLY 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           A  P         +      I S+  + G S  V  GTT+   L DY K H+     + +
Sbjct: 118 A-APTVKDPNVLVVKKDDSSIKSLDDVGGKSTEVVQGTTSAKQLEDYNKQHSDNPTVLNY 176

Query: 177 ERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQG 233
            +    +I       + D    D        + N       ++     + P     + +G
Sbjct: 177 TKANLQQIMGHLSDGQFDYKIFDK-ITVETVIKNQGLDNLKVIDLPSDQQPYVYPLLAKG 235

Query: 234 DTEWYNIVSWTHY 246
             E    V     
Sbjct: 236 QDELKTFVDKRIQ 248


>gi|222102077|ref|YP_002546667.1| ABC-type amino acid transport system periplasmic component
           [Agrobacterium radiobacter K84]
 gi|221728194|gb|ACM31203.1| ABC-type amino acid transport system periplasmic component
           [Agrobacterium radiobacter K84]
          Length = 248

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 78/236 (33%), Gaps = 20/236 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F   L   + F  +                +  G +     F  ++ +G + GFD
Sbjct: 1   MNRRIFFGALVATVAFTQAVFAQDKT---------IVVGTSVDSKPFDFMQ-DGKYVGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++       +     P++      ALQ+  ID+   +   T  R+    + F  
Sbjct: 51  QDLLVEIAKEAGFKYNV---TPMDFGALIPALQTANIDLAISSIFMTDARKKV--VDFSD 105

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y    G ++      I S + L+G  +    G  +   L ++           +F +V
Sbjct: 106 VYYTSALGVLIVANDATIKSGNDLAGKKVASVTGAASTTWLKEHAPTA----QVTLFPQV 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +    ++ R +A   D   L     T  +    ++   +    P+  A  +G  
Sbjct: 162 TNMFMELQSSRAEAVVYDYPFLAYYAATEGKGKVKILEAPVGDGIPVGIAFPKGSD 217


>gi|171777495|ref|ZP_02919217.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283205|gb|EDT48629.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 523

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 31/291 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K        L++LF    S NA          +L+ G+      F       +NG   
Sbjct: 1   MKKLLLSCFAALLLLFGGMTSANADE--------YLRVGMEAAYAPFNWTQDDDSNGAVP 52

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ ++  +   ++           AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQIAKKIADSLGKELLVVK---TTWTGLIPALTSGKIDMIAAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ KK   +  + L       +  +   + L +      
Sbjct: 110 ERKKEIA--FSDSYYTSYPVIVVSKKGDFAQATSLKDF-AGAKLTSQQGVYLYNLIDQIK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-----PSEHVILPDIISK 223
                       ++  A  +   D Y  +     + +  N         +        + 
Sbjct: 167 GASKETAMGDFNQMRQALESGIIDGYVSERPDAISAENANSDFKMIAFEDGKGFATSKAD 226

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           + +A  + + DT+    V+     +   + L +    I +   D +  D +
Sbjct: 227 TAIAVGLRKDDTDTLAKVNAVLAGISDNDRLQLMDDMIEKQPADKSEKDQK 277


>gi|167564595|ref|ZP_02357511.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           oklahomensis EO147]
          Length = 264

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 75/251 (29%), Gaps = 18/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L   +   T      +          L+ G+      F    A G+ +GFD
Sbjct: 1   MKRLQICLALACALGVVTGSGAARAEAAQ-----ALRFGLEAQYPPFESKAATGELQGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+           +++  +      ALQ ++ D ++   + T  R     + F  
Sbjct: 56  IDVGNAVCKEA---RLSCKWVETSFDGLIPALQGRKFDAINSAMNATDQR--RQAIDFTT 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           + Y      I     G + +   L G  I V  G+  E     ++         + ++  
Sbjct: 111 VIYRVPTQLIARADSGLLPTPESLKGKRIGVLQGSIQEAYANAHWA--GAGVRVVAYQDQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            +  A   A R D       A     L+         +   +         +A  + +GD
Sbjct: 169 NQAYADLTAGRLDGTLVLAPAGQRGFLSRPDAKGFAFVGQPVRDDKILGSGIAFGLRKGD 228

Query: 235 TEWYNIVSWTH 245
                 ++   
Sbjct: 229 DALKTRLNAAI 239


>gi|46204163|ref|ZP_00050410.2| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 253

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 6/159 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80
             L  +K+RG L  G     V F+ +  N    G+  + C  ++ A    +  D  +++ 
Sbjct: 93  GTLRKVKERGALTLGYRDASVPFSYLDGNQKPVGYAYEICLKVAEAVKAHLKLDQLEVKL 152

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            P+ +  R   + +  ID+   +T     R+      F    +     F+  K+KG+   
Sbjct: 153 NPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKKEKGLDRT 210

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             L G ++   +GTT+   + +   A  +    +    +
Sbjct: 211 DDLKGRTVVSTSGTTSIRQINEINAARGLGMRILPARTM 249


>gi|331701132|ref|YP_004398091.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128475|gb|AEB73028.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 489

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 83/260 (31%), Gaps = 24/260 (9%)

Query: 1   MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
           M K             ++  L  +F    S   + L  +K+RG L    +     +    
Sbjct: 1   MKKSLKAIIQTLIMIAAVFTLTTVFSNPASAADTSLQRVKQRGELIMVTSPDYPPYEFQV 60

Query: 50  -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G D+D  + ++  +     K+    +N     +A+Q+ + D+     + T 
Sbjct: 61  NKNGKDKIVGMDIDVAKKVAKDL---HVKLVIKSMNFDSLLVAIQTGKADMAIGGINPTA 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            R     + F  I Y  GQ F+++        S   L GA+I  Q GT          K 
Sbjct: 118 AR--RQSVDFSKIYYSGGQSFLINSSDVNKYKSAKNLRGATIGAQTGTLQYGL----AKK 171

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP- 225
                     ++  ++  A + H+ DA   +  +  A    +           +      
Sbjct: 172 KIPNSTVKGMDKSTDLVLALKTHKIDALGIEKPSAEAYVKNDPSLKMISSGYHLNKNEIG 231

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
            A A  +G       V+ + 
Sbjct: 232 AAIAFKKGSGSLVAAVNKSI 251


>gi|323127536|gb|ADX24833.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 725

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L ++ + F +          I     +    +T    F    ++  +KG D
Sbjct: 1   MTYKLKALLLAIVSIIFMTGG--------IASTETIDIVSDTAYAPFEFKDSDQVYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++                      A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKR---QAWNYNMTFPGFDAAVNAIQSGQADALMAGTTITEARKKV--FHFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   +   S L G ++ V+ GT  +  L  + K +        F+  +
Sbjct: 108 PYYDTKIVIATRKANPVKKYSDLKGKTVGVKNGTAAQSFLDKHKKKYGY--TVKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +       A   D   +      N  
Sbjct: 166 LMYNSLSTGSVAAVMDDEPVIQYAISQNQD 195



 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 82/260 (31%), Gaps = 15/260 (5%)

Query: 16  FFTSFSTNASILGD--IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
             TS +T         +K    +    ++    F      G + G D++  +A++     
Sbjct: 252 ATTSQATGDPTAKATPVKASYKIV--SDSSFAPFEFQNDKGKYVGIDMELIKAIAKQ--- 306

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              KI+           A+QS Q D +      T  R+      F    Y       + K
Sbjct: 307 QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSDSYYTSNVILAVKK 364

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            K I+    L+G ++  + GT++   L +    +        F+    +  +  +   +A
Sbjct: 365 GKAINRYDDLNGKTVGAKNGTSSYSWLKENAAKYGYS--VKAFDDGSTMYDSLNSGSVEA 422

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D      LK    +        D IS   +  A+ +  + E   + +    A+  + 
Sbjct: 423 IMDDE---AVLKYAISQGRRFETPLDGISTGEVGFAVKKGTNPELIEMFNNGLAALKQSG 479

Query: 253 ELGITQKNINQVSKDTTNPD 272
           +      +     K     +
Sbjct: 480 KYDAIIDSYLDSKKAAKPSE 499


>gi|295699313|ref|YP_003607206.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295438526|gb|ADG17695.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 275

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 69/231 (29%), Gaps = 10/231 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            ++ L +   +  +     L  +KK G L  G       F  +  NG   GF+ D    +
Sbjct: 10  GLVMLALCAASVAAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEI 68

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              I      ++++ L        L++ + D++      T  R       +         
Sbjct: 69  GKEIGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPVADATD 123

Query: 128 GFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             +       +   S ++G ++    G+     L  Y      +     +    +  A  
Sbjct: 124 ALLKRANDASLKQSSDIAGKTVGAGKGSAQLDQLKSYAATLPKQPDIREYVDNNQAYADL 183

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
            A R  A    ++ +    +   RP    ++          A A+ +    
Sbjct: 184 AAGRIVAVANSMTNIA--YVAKQRPESFAVVQPPFGAKVYFAYALRKDADS 232


>gi|20804072|emb|CAD31275.1| PUTATIVE AMINO ACID ABC TRANSPORTER PERIPLASMIC BINDING PROTEIN
           [Mesorhizobium loti R7A]
          Length = 277

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 82/264 (31%), Gaps = 25/264 (9%)

Query: 1   MYKDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K        ++ L  + F   +    +L  I     L+          A +    +  
Sbjct: 1   MKKIKMAVTAVLIALTSVAFGPSAHAGEVLDRILTSKTLRVAAGADWGLIAHLDEKNELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+D  + ++  +  +     ++            + + DI +     T  R  +    
Sbjct: 61  GYDIDVAKGIAKYLGVNAE---FVTPGWDLIAAGNWAGRWDIGTGQMAPTKAR--ADKFD 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    ++D    ++HK    +  S L G  I V  GT  E      +   +    P+ ++
Sbjct: 116 FSVPYFYDRTVIVVHKDSKATKGSDLEGKKIGVNGGTVAEAYANQTYTPDDPNAAPVPYD 175

Query: 178 ----------RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                              R     R DA   D +          +    + + D +   
Sbjct: 176 FKAGEVKTYGNSTIAFDDLRLGDGVRLDAVITDETFTEGAI----KSGYPIKIIDRLFAL 231

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAM 248
           P A  +++GD E    VS    +M
Sbjct: 232 PAAIPMMKGDKELVEKVSAAIKSM 255


>gi|319441564|ref|ZP_07990720.1| glutamate ABC transport system, solute-binding protein
           [Corynebacterium variabile DSM 44702]
          Length = 288

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 20/254 (7%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSA 70
           L     +   S+L DI + G +  G      G  E   + D+ G D D  R     ++  
Sbjct: 14  LASCGSTEPRSLLDDI-ENGHVTLGTKFDQPGLGERTPDKDFVGLDTDVSRYVVNYIADK 72

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
              +   I +    + +R   + + ++++++        R     + F        Q  +
Sbjct: 73  NGWNEPDITWRETPSAQRETLINNGEVNMIAATYSINAGR--YKAVDFGGPYLVTHQALL 130

Query: 131 MHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +    GISS+  +  G  +C  +G+T    + +             F+         +  
Sbjct: 131 VRGDAGISSLQDIADGTRLCSVSGSTPAQKVKEALPK----VQLQEFDTYAACAEGVKQG 186

Query: 190 RCDAYTGDISALYAL--KLTNDRPSEHVIL------PDIISKSPLAPAIIQGDTEWYNIV 241
             DA T D + L     +       +  ++          +       + +GD    + V
Sbjct: 187 VVDALTTDATILAGFAERYKERYGDDFKVVELKNEDGSYWTDENYGIGLPKGDGADRDAV 246

Query: 242 SWTHYAMVTAEELG 255
           +     M  + E  
Sbjct: 247 NEALTEMWESGEFR 260


>gi|86136437|ref|ZP_01055016.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseobacter sp. MED193]
 gi|85827311|gb|EAQ47507.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseobacter sp. MED193]
          Length = 254

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 73/203 (35%), Gaps = 22/203 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFD 60
            K    + L L  L   +   +            +K GI       FA + ++G W G++
Sbjct: 3   IKTLLAAGLTLATLTAGTAQADQ-----------VKIGIAAEPYPPFASLDSSGTWVGWE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+ +A   D       P+       +L  +QID +  +   T  R  +  + F  
Sbjct: 52  IEVIDAVCAAAELD---CVLTPVAWDGIIPSLTGQQIDAIMASMSITEERLKT--IDFSD 106

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +  K   I  +   L G  I +QA T  +    +YFK         V++  
Sbjct: 107 AYYNTPAVIVADKSMDIAPTPEGLDGKIIGIQASTIHQAYAQEYFK----GAEIRVYQTQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALY 202
           +E +    A R DA   D  A+ 
Sbjct: 163 DEANQDLFAGRIDATQADSIAMA 185


>gi|114321290|ref|YP_742973.1| extracellular solute-binding protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227684|gb|ABI57483.1| L-glutamine-binding protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 247

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 75/201 (37%), Gaps = 12/201 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L   I +G V F   + +G+W GF+++   A++     D     Y  +N      ALQ+ 
Sbjct: 25  LTIAIPSGFVPFMF-EEDGEWTGFEIELWEAIAEENGWDYE---YNTMNFSGIITALQTG 80

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
           ++D        T  RE ++   F    Y  G   ++      +  +  L+G ++ V  GT
Sbjct: 81  RVDGAIAAITITSQREETM--DFSHAYYDSGLMLMVRSDNETVRGIDDLAGKTLAVTTGT 138

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T++   +D             F R E+     RA R DA   D   +     T     E 
Sbjct: 139 TSDDYASDNLP----DTQLRRFSRAEQAYLEVRAGRVDAALHDTPNVMFYIETAGDG-EV 193

Query: 215 VILPDIISKSPLAPAIIQGDT 235
           + + + +     A A  +   
Sbjct: 194 MAVGENLEAQSYAMAFPRNSE 214


>gi|38046578|gb|AAR09149.1| arginine-binding periplasmic protein 2 [Mannheimia haemolytica]
          Length = 212

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 29/209 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K          +LF    +  A  +  + +              F      G+  GFD
Sbjct: 1   MKKTLLT------LLFGCVVTAQAQDIKFVME---------PSYPPFEMTDEKGEIIGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +          +L+ KQ D           R+    + F  
Sbjct: 46  VDIANAICKEM---NANCTFHSQPFDSLIQSLKQKQFDAAISGMGIAEPRKK--QVLFSE 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     FI  K    + V      +I VQ GTT +  LA   K +N       +   +
Sbjct: 101 PYFPSSAAFIAKKDIDFAKVK-----TIGVQNGTTYQHYLAKEKKEYN----VKSYASYQ 151

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                 +  R DA  GD+  L  +   ++
Sbjct: 152 NAILDVQNGRIDAIFGDVPVLAEMARKHE 180


>gi|254241587|ref|ZP_04934909.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           2192]
 gi|126194965|gb|EAZ59028.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           2192]
          Length = 261

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ G++         + +G   GF ++   AL + +    ++ +++  N      AL 
Sbjct: 26  KVLRLGVDPTYPPLEYKQPDGRLAGFGIEIGEALCAEL---RARCEWVESNWDGIIPALL 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           S++ID +  +   T  R   +   F           ++ +    +     L G  + V  
Sbjct: 83  SRKIDAIVSSMTITPKRAQHIA--FTDRVSNAPSRLVVRRGSALLPDAESLRGKRVGVGQ 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E      + A       + ++  +++ A     R DA            L      
Sbjct: 141 GSNQEAYAKAEWAAKG--VRVVSYQNQDQVYADLVMGRLDASLQGAVQASYGFLDKPVGK 198

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +  +   ++             + + D      ++    A + A
Sbjct: 199 DFELAGAVLDDPRYFGIGDGIGLRKEDVALREDLNKAL-ATIRA 241


>gi|15598119|ref|NP_251613.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           PAO1]
 gi|107102472|ref|ZP_01366390.1| hypothetical protein PaerPA_01003534 [Pseudomonas aeruginosa PACS2]
 gi|218890878|ref|YP_002439744.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           LESB58]
 gi|254235904|ref|ZP_04929227.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           C3719]
 gi|9949017|gb|AAG06311.1|AE004718_8 periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           PAO1]
 gi|126167835|gb|EAZ53346.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           C3719]
 gi|218771103|emb|CAW26868.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           LESB58]
          Length = 261

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ G++         + +G   GF ++   AL + +    ++ +++  N      AL 
Sbjct: 26  KVLRLGVDPTYPPLEYKQPDGRLAGFGIEIGEALCAEL---RARCEWVESNWDGIIPALL 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           S++ID +  +   T  R   +   F           ++ +    +     L G  + V  
Sbjct: 83  SRKIDAIVSSMTITPKRAQHIA--FTDRVSNAPSRLVVRRGSALLPDAESLRGKRVGVGQ 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E      + A       + ++  +++ A     R DA            L      
Sbjct: 141 GSNQEAYAKAEWAAKG--VRVVSYQNQDQVYADLVMGRLDASLQGAVQASYGFLDKPVGK 198

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +  +   ++             + + D      ++    A + A
Sbjct: 199 DFELAGAVLDDPRYFGVGDGIGLRKEDVALREDLNKAL-ATIRA 241


>gi|298252594|ref|ZP_06976388.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis 5-1]
 gi|297532958|gb|EFH71842.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component [Gardnerella vaginalis 5-1]
          Length = 302

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 79/276 (28%), Gaps = 43/276 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD----------------------------IKK 32
           M+K      +   ++   S +                                    + K
Sbjct: 1   MFKSMKPVAIVASLVMIGSIAACGPADSKEADPDVARSYDVSHVQKDDAVAALVPAPVAK 60

Query: 33  RGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            G L  G+N          A+G    G+++DF +AL+  +       + +         A
Sbjct: 61  TGELTVGVNVSYAPAEFFAADGKTPVGYEIDFSKALAKVMGLKA---KIMHAQFDSIIPA 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICV 150
           + S + ++          R     + F       G  F + K          L G  + +
Sbjct: 118 IGS-KYNVGISGFTVNAER--MKSVDFI-TYANAGLSFEVRKGNPTKVDPKNLCGKKVTL 173

Query: 151 QAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           + GT  E  + +         N     + F+   +   A  + R D    D     A   
Sbjct: 174 ETGTVGEPIMEEAKKQCAAKGNKPLEIMSFKEQTDATTALLSGRADVMYADTP--VAGYA 231

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           +   P +  IL +     P+  A+ +GD      V 
Sbjct: 232 SIKNPGKLEILENSKDSEPMGAAVKKGDAAMLKAVK 267


>gi|126208817|ref|YP_001054042.1| arginine-binding periplasmic protein precursor [Actinobacillus
           pleuropneumoniae L20]
 gi|165976778|ref|YP_001652371.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|126097609|gb|ABN74437.1| arginine-binding periplasmic protein precursor [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876879|gb|ABY69927.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 239

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S + L                   +   L   +      F      G+  GFD
Sbjct: 1   MKKLLLASAIALTAFSA--------------QAKDLTFAMEPSYPPFELTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +          A++ K+ID      D T  R   +   F  
Sbjct: 47  VDIANAICKEI---QANCSFKSQAFDGLIQAVKQKRIDGAISAIDITEARAKQVA--FTD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     ++ VQ GTT +  +    K    +Y P  +  ++
Sbjct: 102 AYYDSSASFIAVKGKADLNTA----KNVGVQNGTTFQQYVVAEAK----QYAPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       S     +       + L  A+ + + E  
Sbjct: 154 DAVLDLKNGRIDIIFGDTAVLADMLSKEAELSFVGDKVTNKKYFGNGLGIAVNKSNGELV 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 AELNKGLAAIKANGEYQ 230


>gi|222823906|ref|YP_002575480.1| glutamine-binding periplasmic protein [Campylobacter lari RM2100]
 gi|222539128|gb|ACM64229.1| glutamine-binding periplasmic protein [Campylobacter lari RM2100]
          Length = 254

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 79/213 (37%), Gaps = 11/213 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
              L  G+      F      G+  G  V+F +A +     D   ++   +       AL
Sbjct: 16  AKELIVGMELAYPPFEMSDTKGNPSGISVEFLQAFAKEKNYD---LKIQNIAWDGLIPAL 72

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICV 150
           ++++ID++  +   +  R+    + F           +  KK  I+S+  L+  G  + +
Sbjct: 73  RTQKIDLIMSSMSISEQRKKV--IDFTSPYAKANLAILSAKKSNINSIEDLNQKGKILAL 130

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + G++  L      K        +VF++           + DA+  D  ++Y     +  
Sbjct: 131 KRGSSAHLYAQKNLK----NAKILVFDKENAAILEVIQAKADAFIYDQMSIYKAWQKHPE 186

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            ++ +  P   +    A A+ + +T+    ++ 
Sbjct: 187 QTKAIFTPFEKTPEQWAIALNKNNTKLKEELNE 219


>gi|53728962|ref|ZP_00134422.2| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 244

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S + L                   +   L   +      F      G+  GFD
Sbjct: 6   MKKLLLASAIALTAFSA--------------QAKDLTFAMEPSYPPFELTNEKGEIIGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +          A++ K+ID      D T  R   +   F  
Sbjct: 52  VDIANAICKEI---QANCSFKSQAFDGLIQAVKQKRIDGAISAIDITEARAKQVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     ++ VQ GTT +  +    K    +Y P  +  ++
Sbjct: 107 AYYDSSASFIAVKGKADLNTA----KNVGVQNGTTFQQYVVAEAK----QYAPKSYASLQ 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       S     +       + L  A+ + + E  
Sbjct: 159 DAVLDLKNGRIDIIFGDTAVLADMLSKEAELSFVGDKVTNKKYFGNGLGIAVNKSNGELV 218

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 219 AELNKGLAAIKANGEYQ 235


>gi|126740300|ref|ZP_01755989.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseobacter sp. SK209-2-6]
 gi|126718755|gb|EBA15468.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseobacter sp. SK209-2-6]
          Length = 254

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 87/223 (39%), Gaps = 19/223 (8%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K GI       F+ + ++G+W G++++   A+ +A   D       P+       +L  
Sbjct: 26  VKIGIAAEPYPPFSSLDSSGNWVGWEIEVINAVCAAAELD---CVITPVAWDGIIPSLTG 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           +QID +  +   T  R  +  + F    Y      +  K   I+     L+G  + +QA 
Sbjct: 83  QQIDAIMASMSITEERLKT--IDFSDPYYNTPAVIVADKSMDIAPTPDSLAGKIVGIQAS 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +    +YFK         V++  +E +    A R DA T   S   A  + +   S 
Sbjct: 141 TIHQAYAQEYFK----GAELKVYQTQDEANQDLFAGRIDA-TQADSIAMADFVNSGNGSC 195

Query: 214 HVILPDIISKSP------LAPAIIQGDTEWYNIVSWTHYAMVT 250
              +   ++  P      +   + +G+TE    ++    A++ 
Sbjct: 196 -CEIKGAVADDPAILGRGVGAGVRKGETELLEALNKGIAAILA 237


>gi|253576693|ref|ZP_04854020.1| amino acid ABC transporter substrate-binding protein [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251843903|gb|EES71924.1| amino acid ABC transporter substrate-binding protein [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 283

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 90/293 (30%), Gaps = 38/293 (12%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASIL--------------------GDIKKRGFLKCG 39
           M K       + ++ +   +     +                         +    L  G
Sbjct: 1   MKKWGMLFIAVLMVTMVLAACGQEKNNSGNAANNAGQAANQNETQAGGDQTEPAKKLIVG 60

Query: 40  INTGLVGFAE--VKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++     +        G+    GFDV+  + ++  +  +   ++   L        L S 
Sbjct: 61  MSADFPPYEFHIKNDKGEDEIVGFDVEIAKEIAKDLGAE---LEIKDLKFDTLLNELSSG 117

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           ++D++      T  R     +    I Y   Q  +     K   S++  L GA I VQ G
Sbjct: 118 RVDLVISGLSPTPERAE--QIDMSQIYYKAEQAVVTREADKDKFSTMESLEGAKIGVQQG 175

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E    +   A           ++ +I     ++R DA   +     +          
Sbjct: 176 SIQEEMAKEIPNAK-----LTSLAKINDIIMQLNSNRVDAAILEGPVAESFVKNVKGLVI 230

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               P +         I +G+ E  + V+ T   +++A  +       +++++
Sbjct: 231 TDAKP-VTEDEGYVIGIKKGNQELLDQVNKTLDRLISAGSIDQFVAEASELAE 282


>gi|84494728|ref|ZP_00993847.1| putative ABC transporter substrate-binding protein [Janibacter sp.
           HTCC2649]
 gi|84384221|gb|EAQ00101.1| putative ABC transporter substrate-binding protein [Janibacter sp.
           HTCC2649]
          Length = 276

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 85/285 (29%), Gaps = 28/285 (9%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGF-------LKCGINTGLVGFAEVKANGDWK 57
                L   +      S +          G        LK   +     F   + +    
Sbjct: 12  LAAVTLVSTLALAACGSGDGDTPAATNSAGVTLITAGKLKACTHLSYKPFEFKEGS-KVV 70

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD    ++  +  +   +            A  +K+ DI    T     R+  L + 
Sbjct: 71  GFDVDLGDLIAKKLGVEQEVVDIEFGT-ITSGAAFAAKKCDIGYGATTINDKRK--LAVL 127

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    +   Q  I+ K  GI+ +  L G  + VQ  TT +    D   A+     P+VF+
Sbjct: 128 FSDPYFDATQALIVKKGSGITDLPGLKGKKVGVQTDTTGQSYAEDNKAANGY--TPVVFD 185

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            +    A   + R +    D           D P+   ++ +  +           D   
Sbjct: 186 DLPTQLAGVLSGRVEGAINDN--GPLFDYVKDNPTT-EVVKEFATGEQYGLMYKIKDA-- 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282
                        AE      K  +  +  T N   +++ G+D  
Sbjct: 241 --------NGTKLAELGNQVLK--DAKADGTYNTIYKKWFGVDAP 275


>gi|331700314|ref|YP_004336553.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans
           CB1190]
 gi|326955003|gb|AEA28700.1| ABC-type transporter, periplasmic subunit family 3 [Pseudonocardia
           dioxanivorans CB1190]
          Length = 306

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 72/250 (28%), Gaps = 14/250 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
            +    I       +  A +   +   G L  G++        V  +G    G DVD   
Sbjct: 40  TTSAAAIPTVAKDAALAAMVPASVTSDGKLVFGVDASYPPNEFVDTDGTTIVGMDVDMGT 99

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++      P    +           +Q  + ++   +      R   + +      +  
Sbjct: 100 AIAQKFGLTPE---FQNSAFPGIIPGIQGGKYEMALSSFTINDERVQLVDMI---SYFSA 153

Query: 126 GQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVE 180
           G      K      S+  L G +I VQAGT     +A        A          ++  
Sbjct: 154 GTSLATKKGNPDGLSIDDLCGKAIGVQAGTVQVDDIATRSKACTDAGKPAIQSTELQQQT 213

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A  ++R      D   +           +  ++      +P    + +   ++   
Sbjct: 214 DVTLALTSNRIVGMLADSPVIA--YAVKTTGDQLQVVGSAYDTAPYGVVVNKNQGQYPQA 271

Query: 241 VSWTHYAMVT 250
           V     A++ 
Sbjct: 272 VQQAVQALIA 281


>gi|50121890|ref|YP_051057.1| putative extracellular solute-binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612416|emb|CAG75866.1| putative extracellular solute-binding protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 277

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 99/246 (40%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +      + + ++  + FS  A    S    IK+ G L+ G+  G   + +  + G+W
Sbjct: 1   MKRSLHQVFMAMTLVSASFFSQAAETQQSTWQHIKQTGELRIGVAQGEPWYFKNPSTGEW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   +  + L++ +      ++           ALQ+ QID +    D T  R+    +
Sbjct: 61  DGIGYNIGKELANDLGVKLVTVE---TTWGNAIAALQTGQIDTML-VLDPTEERKK--AV 114

Query: 117 AFR-PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHP 173
            F     ++  QG ++     +++   L+     I V  G++ +L L             
Sbjct: 115 DFPEQPFFWYAQGVLIRDGIAVTNWDDLNREDVKIGVTLGSSPDLILTKRLPKA----QL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F  ++E  AA+ A R DA +    AL   +    + +  +ILP  I +   + AI + 
Sbjct: 171 VRFPNMDEGVAAFYAGRVDALSYFHPALALQQAKVGKGN--LILPKPIIEVSTSGAIRKE 228

Query: 234 DTEWYN 239
             + ++
Sbjct: 229 ADQTFH 234


>gi|322375095|ref|ZP_08049609.1| ABC transporter, substrate-binding protein [Streptococcus sp. C300]
 gi|321280595|gb|EFX57634.1| ABC transporter, substrate-binding protein [Streptococcus sp. C300]
          Length = 280

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + S++ L ++     +  +               +  +    N     F   + 
Sbjct: 1   MKKIVKYSSLVALGLVAAGVLAACSGGDKKDTATSEAASGKKEIIVATNASPKPFNY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   +++        F  L S +  +   N  +T  R  
Sbjct: 60  NGELTGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDSDRYQMAVNNISYTKERAE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H    
Sbjct: 118 --KYLYAAPTAKNPNVLVVKKDDNSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHADNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I +     + D    D        + N       ++     + P    
Sbjct: 176 TVLNYTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|50913644|ref|YP_059616.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS10394]
 gi|139474392|ref|YP_001129108.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           str. Manfredo]
 gi|50902718|gb|AAT86433.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS10394]
 gi|134272639|emb|CAM30906.1| extracellular solute-binding protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 280

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 75/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKANGDW 56
           M K  ++    + +      +   S              +          F+  +  G  
Sbjct: 1   MIKKQYLGRATIALASTLVLAACGSSKKAESGNQGSSKEVLFATVGTTAPFSY-EKGGQL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R      
Sbjct: 60  TGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA--KY 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F           ++ K   I S   + G +  V  GTT+   L D+ K H+     + F
Sbjct: 116 LFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTLKF 175

Query: 177 ERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQG 233
                 ++       + D    D   + A  + N        +    ++ P +     Q 
Sbjct: 176 TNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFSQD 234

Query: 234 DTEWYNIVSW 243
             +  + V+ 
Sbjct: 235 QEKLQSFVNK 244


>gi|33592623|ref|NP_880267.1| putative amino acid-binding periplasmic protein [Bordetella
           pertussis Tohama I]
 gi|33572269|emb|CAE41821.1| putative amino acid-binding periplasmic protein [Bordetella
           pertussis Tohama I]
          Length = 263

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 75/259 (28%), Gaps = 14/259 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M     + IL  + +   + S  A  L +++                      +   +G 
Sbjct: 1   MKIKAALGILATVGMLAHAGSAAARTLDEVRAAKSANVVTTASAPPHGFKNPASNQLEGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD   A++  +      +    +        L S + D++S     T  R     + F 
Sbjct: 61  MVDVGAAVAKHLG---VAMNLKDVPFSGLIPTLTSGRADVMSAPLFVTPERAKV--IDFS 115

Query: 120 PITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+G ++       I     L G  I V   +     + D             ++
Sbjct: 116 APVYEWGEGLVLREQNPDDIKRFEDLQGRRIGVLVDSVQFNMIKDM-----PDTKVSTYQ 170

Query: 178 RVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               + A  RA R +       S +Y ++       +         K  +  A+ + +  
Sbjct: 171 DYSTLLADVRAGRIELGIIDPPSIIYQIRTKKIPGVKLATQYQPQKKWHVGLAVQKDNKA 230

Query: 237 WYNIVSWTHYAMVTAEELG 255
             + V+     M    EL 
Sbjct: 231 LLDAVNVALAEMKRNGELA 249


>gi|56697509|ref|YP_167877.1| polar amino acid ABC transporter periplasmic substrate-binding
           protein [Ruegeria pomeroyi DSS-3]
 gi|56679246|gb|AAV95912.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Ruegeria pomeroyi DSS-3]
          Length = 277

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 17/256 (6%)

Query: 6   FVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           FV    +  +  ++ +  A          I +RG +  G+      +      G   G +
Sbjct: 4   FVGGTTIAAMLMSTGAAMAEQCTNETWNKIAQRGTIVVGVKADTRPWGYRDQTGGIIGME 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  R ++  +      ++ + + +  R   L+  +ID++         R   +G+   P
Sbjct: 64  ADMARQVADTLG---VALELVAVESSNRMQFLEGGRIDLMIATMSDRKDRREIVGIV-GP 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G   +  K  G+++ S L    +C + G      +   + A       I F    
Sbjct: 120 NYYSSGTNVMTPKALGVTAWSDLKNRPVCGKQGAFYNQIVEQRYGA-----QIIAFGSNA 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--WY 238
           E   A R  +C A+  D S++ A   +     E  +       +P   A+   + +  + 
Sbjct: 175 EALQALRDKKCIAWVYDDSSIAADLAS-GHYDEFEMPLVSEDNNPWGLAVPIAERDCVFG 233

Query: 239 NIVSWTHYAMVTAEEL 254
             +S   Y+   + EL
Sbjct: 234 RFMSGMQYSWHQSGEL 249


>gi|313624521|gb|EFR94518.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria innocua FSL J1-023]
          Length = 480

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 88/285 (30%), Gaps = 22/285 (7%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       ++I C+ +  FT    NA    +         G +T    F   + +G  
Sbjct: 1   MKKFSRFILTMAIACVAMFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGKH 54

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+D  +A++        K +   +       AL++ Q+D +      T  R+     
Sbjct: 55  VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109

Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G    I+     I +   L G  + V+ GT            +      +V
Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKNYDDLKGKKVAVKTGTEGYAFAEKIKDKYGFD--IVV 167

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   ++    +     A   D   L     T    +   I+ +    +    A+ +G  
Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGQN 224

Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGI 279
           +            + A  E     +          N   + F+GI
Sbjct: 225 QELLKKFNAGLVNIKASGEYDKILETYLGKDAVKENTTEKGFMGI 269


>gi|170695840|ref|ZP_02886981.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170139264|gb|EDT07451.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 275

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 10/230 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L +   +  +     L  +KK G L  G       F  +  NG   GF+ D    + 
Sbjct: 11  LVMLALCAASVSAYAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEVG 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++++ L        L++ + D++      T  R       +          
Sbjct: 70  KELGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPITVTKAR--MERYTYTLPIADATDA 124

Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +       +   S ++G ++    G+     L  Y            +    +  A   
Sbjct: 125 LLKRANDSALKQSSDIAGKTVGAGKGSAQLDQLKAYVATLPKPPEIREYVDNNQAYADLA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
           A R  A    ++ +    +   RP    ++          A  + +    
Sbjct: 185 AGRIAAVANSMTNIA--YVAKQRPETFAVVQPPFGAKVYFAYCLRKDADS 232


>gi|171779738|ref|ZP_02920694.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281840|gb|EDT47274.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 517

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 22/254 (8%)

Query: 3   KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK---AN 53
           K   V+   ++++  T        +T A  +  I+  G L    N G   +        +
Sbjct: 247 KSLLVTAAFIVMIIGTFAFNHRETNTAAGSIEKIQNSGQLGVATNIGYAPYEFYDLSSGH 306

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D+ F + L++ +     K+    +N       + S   DI       T  RE  
Sbjct: 307 KKAVGVDLAFAKQLANKL---QVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKEREK- 362

Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F           ++ K      ++++ L+ +SI VQ  TT E  + +  K      
Sbjct: 363 -SVDFTQNYVKQINKVVVRKDSAPQYTAIADLAQSSIAVQKSTTQEDVVKEDIKPK---- 417

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +    + +        + DA   D +   A +             D+   +  A A+ 
Sbjct: 418 QIVALSSLPDAFLNLAQGKVDAVVADDT--VADQYIASNSELTYADIDLPGTTETAMALT 475

Query: 232 QGDTEWYNIVSWTH 245
           +G+      V    
Sbjct: 476 KGNQSLKAYVDKLI 489


>gi|294793252|ref|ZP_06758398.1| probable amino-acid-binding protein YxeM [Veillonella sp. 6_1_27]
 gi|294456197|gb|EFG24561.1| probable amino-acid-binding protein YxeM [Veillonella sp. 6_1_27]
          Length = 279

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 8/245 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K F +  L L +L       + S    +      +       +  ++    NG+  GFDV
Sbjct: 9   KLFAIGALALGVLVVAGCGDDTSKETKVNPDAKVINVATRGTVRPYSYTDDNGNLTGFDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +     +      + P+     F+A+ + Q+D+++        RE          
Sbjct: 69  ELLKEIERR--NPDLHFNFKPMAVDAAFVAMDAGQVDMIANQMRRNPTREAKYYYTNEVN 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV-E 180
            Y   +  + + +  IS +  L G  I V   +     +  + +  N +   I  ++   
Sbjct: 127 NYSTRKLVVKNDRNDISKLDDLKGKKIAVTTSSEFNELVKQFNETANPQIEVIYTDKAGA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        R DA               DR      + D+++  P     +   T+    
Sbjct: 187 ETLNLVATGRADA--AGEYEYVINSAIKDRGLPLKAVGDVLAVVP--TYFLSKRTDDMKQ 242

Query: 241 VSWTH 245
           V+   
Sbjct: 243 VNEKI 247


>gi|114764420|ref|ZP_01443646.1| putative periplasmic binding abc transporter protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114543174|gb|EAU46192.1| putative periplasmic binding abc transporter protein [Roseovarius
           sp. HTCC2601]
          Length = 258

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 81/219 (36%), Gaps = 14/219 (6%)

Query: 37  KCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           K GI       F    ++G+W G+++DF  AL + I  D       P+       AL + 
Sbjct: 25  KVGIAAEPYPPFYSPDSSGNWSGWEIDFADALCAEIEAD---CVITPVAWDGIIPALNTG 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           +ID++  +   T  R   +   F    Y    G I  K+  I  S   + GA + V  GT
Sbjct: 82  KIDMIVASMSITEERAKQIA--FSDKYYDTPTGVIALKETEIQPSAEGIEGAYLGVSVGT 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE- 213
             E     +F           +  V+E      A R DA  GD+ AL     ++   +  
Sbjct: 140 IHETYARAHFSEA--AADIRSYPTVDEELQDLAAGRIDAVVGDMLALMPFLESDAGEACC 197

Query: 214 ----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                V     I  + +   + + DT+    V+    A+
Sbjct: 198 EYRGAVESDPSILGNGVGVGLRKEDTDLLERVNSGIAAI 236


>gi|33595877|ref|NP_883520.1| putative amino acid-binding periplasmic protein [Bordetella
           parapertussis 12822]
 gi|33600407|ref|NP_887967.1| putative amino acid-binding periplasmic protein [Bordetella
           bronchiseptica RB50]
 gi|33565956|emb|CAE36506.1| putative amino acid-binding periplasmic protein [Bordetella
           parapertussis]
 gi|33568006|emb|CAE31919.1| putative amino acid-binding periplasmic protein [Bordetella
           bronchiseptica RB50]
          Length = 263

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 75/259 (28%), Gaps = 14/259 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M     + IL  + +   + S  A  L +++                      +   +G 
Sbjct: 1   MKIKAALGILATVGMLAHAGSAAARTLDEVRAAKSANVVTTASAPPHGFKNPASNQLEGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD   A++  +      +    +        L S + D++S     T  R     + F 
Sbjct: 61  MVDVGAAVAKHLG---VAMNLKDVPFSGLIPTLTSGRADVMSAPLFVTPERAKV--IDFS 115

Query: 120 PITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+G ++       I     L G  I V   +     + D             ++
Sbjct: 116 APVYEWGEGLVLREQNPDDIKRFEDLQGRRIGVLVDSVQFNMIKDM-----PDTKVSTYQ 170

Query: 178 RVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               + A  RA R +       S +Y ++       +         K  +  A+ + +  
Sbjct: 171 DYSTLLADVRAGRIELGIIDPPSIIYQIRTKKIPGVKLATQYQPQKKWHVGLAVQKDNKA 230

Query: 237 WYNIVSWTHYAMVTAEELG 255
             + V+     M    EL 
Sbjct: 231 LLDAVNAALAEMKRNGELA 249


>gi|307309741|ref|ZP_07589392.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306899843|gb|EFN30467.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 313

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 86/275 (31%), Gaps = 23/275 (8%)

Query: 3   KDFFVSILCLIILFFTS-FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +      L L  +  +   S  A  L  I+    +K G +     F+         G+ V
Sbjct: 13  RRIVRFGLTLGAVTVSMWASAEAQTLDRIRSSNTVKLGYDATARPFSFKAEGESATGYAV 72

Query: 62  DFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
             C  ++      +      ++++ L  +    A++    D+    +  TL R   +  +
Sbjct: 73  SLCMEVAEELKRELGIADLAVEWIELTREAADHAIRQGSADLFCGASPVTLTRRKEVSFS 132

Query: 118 FRPITYFDGQGFIMHKKKGISSV------------------SQLSGASICVQAGTTTELT 159
                   G          +  V                  + L+  +    AGTT+E  
Sbjct: 133 IAIFPSGTGAVLNASAPLALREVLTQGRPSDRPIWRGSPARTVLNQKTFSPIAGTTSEDW 192

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           LA+  K   +       E  ++  A       D   GD+  L       +   + ++L  
Sbjct: 193 LAERIKTFQLSATIAAVESYDQGIANILNGESDVLFGDLPLLLDAAARGENSGDLIVLKR 252

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             +  PLA  + + D ++  +V         +E+ 
Sbjct: 253 HFTYEPLALVLARNDEDFRVVVDRALSRTYRSEDF 287


>gi|302335555|ref|YP_003800762.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
 gi|301319395|gb|ADK67882.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
          Length = 290

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 72/251 (28%), Gaps = 15/251 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKR--GFLKCGINTGLVGFAEVKANGDWKGFDVD 62
              + + L      +                G    G +     +  V  +G + GFD++
Sbjct: 19  ILSTPILLATAGCGAAPAPVGTKEGGPSSFDGNFVVGFDQDFPPYGYVGDDGRYTGFDLE 78

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +A+        +     P++   +   L S QI  +         RE      F    
Sbjct: 79  LAQAVCEKEGWTYTP---SPISWDAKDGLLNSGQITCIWNGFTI-EGREGDYA--FTSPY 132

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK---YHPIVFERV 179
             + Q  ++    GIS  + L+G ++ VQA +     L+       +             
Sbjct: 133 MENRQVVVVRSDSGISGFAGLAGKNVVVQADSAAYDLLSTDGTQAELGASFSQLQTIGEY 192

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237
                   +   DA   D     A+    D+ +   IL + +S           D   E 
Sbjct: 193 NTAFMMLESGSVDAVAVDYP--VAVYNIGDKTATFAILDEALSSEHFGVGFADTDLGREL 250

Query: 238 YNIVSWTHYAM 248
              V     A+
Sbjct: 251 AKKVEGDLQAL 261


>gi|296328401|ref|ZP_06870927.1| amino acid-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154475|gb|EFG95267.1| amino acid-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 250

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 82/245 (33%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L +  L F +                L  G N     +  +  N    GFD
Sbjct: 1   MKKIITILMLIMSTLSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L   +  +   I++  ++      ALQ K+ID +      T  RE ++  +   
Sbjct: 46  IELMELLGKELGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I +  G   I++ K       +L   +I VQ GT  E    D          P ++    
Sbjct: 103 IFFEGGHSVIVNSKSTFKKKEELKEKTIGVQLGTIQEQFAKD------NGSVPKLYNNFT 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E     +  + DA      +      T     +   + D +  + +A    + D++    
Sbjct: 157 EALLDLQNQKIDAVIIAEVSANEYLKTMKGVKKIDTIKDKLPNASIA--FRKADSKLAKE 214

Query: 241 VSWTH 245
            S T 
Sbjct: 215 FSDTI 219


>gi|327383907|gb|AEA55383.1| hypothetical protein LC2W_3058 [Lactobacillus casei LC2W]
 gi|327387088|gb|AEA58562.1| hypothetical protein LCBD_3073 [Lactobacillus casei BD-II]
          Length = 487

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 18/278 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +     G +     F     +  + G D+D  +A++     +  K++  PL       A
Sbjct: 32  AQKTYTIGTDVTFAPFEFANQDNKYVGIDLDLIKAIAK---TEGFKVEIKPLGFNAAVQA 88

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++KQID +      T  R            Y  G    + KK  I S+  L G  + V+
Sbjct: 89  LEAKQIDGVIAGMSITPER--QQKFLMSDPYYKSGVVMAVAKKGTIKSLKDLRGKRVAVK 146

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +          +   +  + F+    +          A   D   +   +   +  
Sbjct: 147 TGTDSADYANSI--KNKYGFSTVTFDDSNNMYQDVITGNSAACFEDQPVM---QYGINNG 201

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
               I+     +     A  + +       +           Y  +    LG       +
Sbjct: 202 MALKIIGKPAREGSYGFAASKNNRALITKFNAGLKKLRANGQYDKIIERYLGNGSAKSQK 261

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            +        + F G+ K++      GL +     ++ 
Sbjct: 262 TAAGNAQTTDRSFFGLLKANWGTLMSGLEETMVLTVVA 299


>gi|315612274|ref|ZP_07887188.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
 gi|315315667|gb|EFU63705.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis ATCC 49296]
          Length = 280

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 82/258 (31%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + S+  L ++     +  +               +  +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGDKKDTATSEAASGKKEIIVATNASPKPFNY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   +++        F  L S +  +   N  +T  R  
Sbjct: 60  NGELTGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDSDRYQMAVNNISYTKERAE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H    
Sbjct: 118 --KYLYAAPTAKNPNVLVVKKDDDSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHADNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I +     + D    D        + N       ++     + P    
Sbjct: 176 TILNYTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|227113515|ref|ZP_03827171.1| putative amino acid-binding periplasmic protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 260

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 98/257 (38%), Gaps = 25/257 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M++    + I+ ++ +   +F+          K   L+ G++     F  +  NG+  GF
Sbjct: 1   MFRKLSLLKIVVIVAISPFAFA----------KSDILRIGVDLTYPPFQSMDKNGNPSGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +++   A+  ++    +K  Y+      +  AL +K+ID++      T  R+    + F 
Sbjct: 51  EIEVTDAICKSV---NAKCDYIVNTFDSQITALLAKKIDVI-APLGVT--RKRKESIDFS 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +      +  K+  +   ++ L G +I VQ GT  E     Y+           +  
Sbjct: 105 DYVFHVPTKLVARKESNLLPQAELLRGKNIAVQQGTIQEAYANKYWLPAG--VIVKNYPD 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            E I    ++ R +       A+    L   +  +  +  + ++ + L     A  I + 
Sbjct: 163 QEAIYEDLQSGRVEGALCPSVAVTFGFLKTPQGKDFELKGEEVTDADLFSLGSAYGIRKD 222

Query: 234 DTEWYNIVSWTHYAMVT 250
           DTE   +++     +V 
Sbjct: 223 DTETKQLINQGLKDIVQ 239


>gi|191639795|ref|YP_001988961.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|190714097|emb|CAQ68103.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
          Length = 488

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 18/278 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +     G +     F     +  + G D+D  +A++     +  K++  PL       A
Sbjct: 33  AQKTYTIGTDVTFAPFEFANQDNKYVGIDLDLIKAIAK---TEGFKVEIKPLGFNAAVQA 89

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++KQID +      T  R            Y  G    + KK  I S+  L G  + V+
Sbjct: 90  LEAKQIDGVIAGMSITPER--QQKFLMSDPYYKSGVVMAVAKKGTIKSLKDLRGKRVAVK 147

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +          +   +  + F+    +          A   D   +   +   +  
Sbjct: 148 TGTDSADYANSI--KNKYGFSTVTFDDSNNMYQDVITGNSAACFEDQPVM---QYGINNG 202

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
               I+     +     A  + +       +           Y  +    LG       +
Sbjct: 203 MALKIIGKPAREGSYGFAASKNNRALITKFNAGLKKLRANGQYDKIIERYLGNGSAKSQK 262

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            +        + F G+ K++      GL +     ++ 
Sbjct: 263 TAAGNAQTTDRSFFGLLKANWGTLMSGLEETMVLTVVA 300


>gi|322412041|gb|EFY02949.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 725

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 62/210 (29%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L ++ + F + S        I     +    +T    F    ++  +KG D
Sbjct: 1   MTYKLKALLLAIVSIIFMTGS--------IASTETIDIVSDTAYAPFEFKDSDQVYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++                      A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKR---QAWNYNMTFPGFDAAVNAIQSGQADALMAGTTITEARKKV--FHFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   +   S L G ++ V+ GT  +  L  Y K +        F+  +
Sbjct: 108 PYYDTKIVIATRKANPVKKYSDLKGKTVGVKNGTAAQSFLDKYKKKYGY--TVKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +       A   D   +      N  
Sbjct: 166 LMYNSLATGSVAAVMDDEPVIQYAISQNQD 195



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 82/260 (31%), Gaps = 15/260 (5%)

Query: 16  FFTSFSTNASILGD--IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
             TS +T         +K    +    ++    F      G + G D++  +A++     
Sbjct: 252 ATTSQATGDPTAKATPVKASYKIV--SDSSFAPFEFQNDKGKYVGIDMELIKAIAKQ--- 306

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              KI+           A+QS Q D +      T  R+      F    Y       + K
Sbjct: 307 QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSDSYYTSNVILAVKK 364

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            K I+    L+G ++  + GT++   L +    +        F+    +  +  +   +A
Sbjct: 365 GKAINRYDDLNGKTVGAKNGTSSYSWLKENAAKYGYS--VKAFDDGSTMYDSLNSGSVEA 422

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D      LK    +        D IS   +  A+ +  + E   + +    A+  + 
Sbjct: 423 IMDDE---AVLKYAISQGRRFETPLDGISTGEVGFAVKKGTNPELIEMFNNGLAALKQSG 479

Query: 253 ELGITQKNINQVSKDTTNPD 272
           +      +     K     +
Sbjct: 480 KYDAIIDSYLDSKKAAKPAE 499


>gi|116050925|ref|YP_790251.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586146|gb|ABJ12161.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 261

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ G++         + +G   GF ++   AL + +    ++ +++  N      AL 
Sbjct: 26  KVLRLGVDPTYPPLEYKQPDGRLAGFGIEIGEALCAEL---RARCEWVESNWDGIIPALL 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           S++ID +  +   T  R   +   F           ++ +    +     L G  + V  
Sbjct: 83  SRKIDAIVSSMTITPKRAQHIA--FTDRVSNAPSRLVVRRGSALLPDAESLRGKRVGVGQ 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E      + A       + ++  +++ A     R DA            L      
Sbjct: 141 GSNQEAYAKAEWAAKG--VRVVSYQNQDQVYADLVMGRLDASLQGAVQASYGFLDKPVGK 198

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +  +   ++             + + D      ++    A + A
Sbjct: 199 DFELAGAVLDDPRYFGVGDGIGLRKEDVALREDLNKAL-ATIRA 241


>gi|262041364|ref|ZP_06014570.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259041287|gb|EEW42352.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 295

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 77/260 (29%), Gaps = 13/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  ++    S+   A+ L +I+K G L          F  +  NG   GF+
Sbjct: 13  MKKSLASMCLSAVLTVAFSYHAVAADLPEIEKSGTLTVATEDDYAPFNFMN-NGQADGFN 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L          +    L       A+ + Q D+       T  R       F P
Sbjct: 72  KDMLEELRK---YAKFHVDQSILPWTGLLAAVSTGQYDMALTGAVITDERLKV--FDFTP 126

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIV 175
                   F+       +++++ LSG  + +QAG+     L +      K        + 
Sbjct: 127 PWASAQHYFVKRAGDTSLNTIADLSGKKVGLQAGSALLARLPELKAMLEKTGGKLGPVVE 186

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E  A     R D        +    L   +P        +     +A  I +   
Sbjct: 187 YPSYPEAYADLANKRLDYVI--NVVISVNDLAKTKPKVFAKGLAVSGPGYMAWPIPKNSP 244

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +    ++     M    +L 
Sbjct: 245 QLLAYMTRFMNHMKETGKLA 264


>gi|262173297|ref|ZP_06040974.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
 gi|261890655|gb|EEY36642.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
          Length = 278

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 20/242 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +++   L  IK+RG L+ G++T  V +A     G+  GF++D  + L +       ++
Sbjct: 29  AVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLVADSGW---QV 84

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136
           +++P        AL +K+ D++      T  R  S  + F       G      KK  +G
Sbjct: 85  EFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASKKLAEG 142

Query: 137 ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            S +   +     I  + G  T     + F         + F+   +           A 
Sbjct: 143 FSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVINGNAHAV 198

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAMV 249
                      + +      +   + +SK   A A+  G+ +        I   T    +
Sbjct: 199 IASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGWL 257

Query: 250 TA 251
            A
Sbjct: 258 QA 259


>gi|218461152|ref|ZP_03501243.1| extracellular solute-binding protein family 3 [Rhizobium etli Kim
           5]
          Length = 256

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 29/256 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M     + ++    L  ++   NA           ++ GI N     F    A+G+W G+
Sbjct: 1   MK--TTICLIAGATLLASAAGANA----------EIRFGIMNEAYPPFFTKDASGNWVGW 48

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+ S +         + ++       LQSK+ D++  +   T  R+ ++   F 
Sbjct: 49  EIDLMNAVCSEM---KETCSVVDMSWDGLIPGLQSKKFDVIWSSMSITDERKKTVA--FT 103

Query: 120 PITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y      I  +     +    L+G +I +Q  T        Y+ +         +  
Sbjct: 104 NKYYNTPSKLIGAQDGKTGTAVEDLAGKTIGIQVSTIQADYYKKYYAS---VASEKTYAT 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTN------DRPSEHVILPDIISKSPLAPAIIQ 232
           ++E        R D   GD   L +   T+      +        P ++ +  +   + Q
Sbjct: 161 LDEAFQDLAVGRIDYVFGDSIPLMSFLQTDFGKGCCEDKGNVKDDPQVLGQG-IGGGLRQ 219

Query: 233 GDTEWYNIVSWTHYAM 248
            DTE    ++    A+
Sbjct: 220 EDTELLARLNTAIAAV 235


>gi|330007454|ref|ZP_08305953.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|328535465|gb|EGF61933.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 295

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 13/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  ++    S+   A+ L +I+K G LK         F  +  NG   GF+
Sbjct: 13  MKKSLASMCLSAVLTVAFSYHAVAADLPEIEKSGTLKVATEDDYAPFNFMN-NGQADGFN 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L          +    L       A+ + Q D+       T  R       F P
Sbjct: 72  KDMLEELRK---YAKFHVDQSILPWTGLLAAVSTGQYDMALTGAVITDERLKV--FDFTP 126

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIV 175
                   F+       +++++ LSG  + +QAG+     L +      K        + 
Sbjct: 127 PWASAQHYFVKRAGDTSLNTIADLSGKKVGLQAGSALLARLPELKAMLEKTGGKLGPVVE 186

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E  A     R D        +    L   +P        +     +A  I +   
Sbjct: 187 YPSYPEAYADLANKRLDYVI--NVVISVNDLAKAKPKVFAKGLAVSGPGYMAWPIPKNSP 244

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +    ++     M    +L 
Sbjct: 245 QLLAYMTKFMNHMKETGKLA 264


>gi|116514929|ref|YP_813835.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116094244|gb|ABJ59397.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 486

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 84/226 (37%), Gaps = 14/226 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKG----FDVDFCRALSSAIFDDPSKIQYLPL 83
                +     G +     F     +G + G     D++  + ++     +  K +   +
Sbjct: 29  AQAASKKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIEILQEIAK---HENFKYELKIM 85

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +      ALQS QID +      T  R+ +  + F    Y DG    + K   I+S+  L
Sbjct: 86  SFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSYYTDGVCLAVAKDSKITSMKDL 143

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V+ GTT+ +      K +  K     +       A  +A   DA   D     +
Sbjct: 144 KGKTVNVKTGTTSAIYAKSIQKKYGFK--LKYYTNSNTSWADVKAGNADACFDDGP---S 198

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           L+      +   I+   +S +PLA A+ +G+ +    +     A +
Sbjct: 199 LRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMFNDGLAWL 244


>gi|323126608|gb|ADX23905.1| ABC transporter substrate-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 280

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K  ++ +  + +      +   S      + G       +          F+  +  G
Sbjct: 1   MIKKQYLGMATITLASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R    
Sbjct: 58  QLTGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F           ++ K   I S   + G S  V  GTT+   L  + K H+ K   +
Sbjct: 114 KYLFSYPIGATPSVLVVPKDSDIKSYDDIEGHSTQVVQGTTSVTQLEAFNKEHSDKPVTL 173

Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            F      ++       + D    D   + A  + N        +    ++ P +     
Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSAEQPFIYFIFS 232

Query: 232 QGDTEWYNIVSW 243
           Q   +  + V+ 
Sbjct: 233 QDQEKLQSFVNK 244


>gi|229918159|ref|YP_002886805.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
 gi|229469588|gb|ACQ71360.1| extracellular solute-binding protein family 3 [Exiguobacterium sp.
           AT1b]
          Length = 252

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 66/241 (27%), Gaps = 17/241 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + +  I       +   +          +  G       F      G+  G+D
Sbjct: 1   MKKTL--TSVLAIGASVGLLAACGNETDSGADEAVITVGTEATYPPFTYK-EKGELMGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D     +         ++Y  ++ K    AL +++ID+++     T  RE     AF  
Sbjct: 58  IDVLNEAAERAGYK---VEYEAMDFKGLVPALDAERIDMIANQMSITPEREE--KYAFSD 112

Query: 121 IT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                  Q  +      I  +  L G  +    G+       +             ++  
Sbjct: 113 PYAVSGAQVIVGSDNNDIQGIDDLDGKVVGSTQGSVYAQMAEE------AGAEVKFYKGA 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++       R DA   D   +           +   + DI + S       Q       
Sbjct: 167 NQVLQDLEVGRLDAALNDRLFILTEL--EKTGYDVKAVGDIFNTSEAGFMTRQDSDVLDK 224

Query: 240 I 240
           +
Sbjct: 225 L 225


>gi|325263518|ref|ZP_08130252.1| putative CjaA protein [Clostridium sp. D5]
 gi|324031227|gb|EGB92508.1| putative CjaA protein [Clostridium sp. D5]
          Length = 288

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 90/266 (33%), Gaps = 35/266 (13%)

Query: 1   MYKDFFVSILCLIILFFTSF---------------------STNASILGDIKKRGFLKCG 39
           M K   + +   +I    +                       + ++ L  I ++G +  G
Sbjct: 5   MKKVIAMMLTTGLIAGMAAGCSSPKKDSSKSSDAAGAGEEGGSGSATLDSILEKGKIVVG 64

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +           +G   G+DVD+   L   +  +   ++ + ++A+ R  AL S ++D+
Sbjct: 65  CSLNGAPIGFTDDSGKEMGYDVDWANRLGEVLGVE---VEIVNVDAETRLPALTSGRVDV 121

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTE 157
           L  N    L R  +  + F       G   +      + ++  L     ++ V  G+T E
Sbjct: 122 LFANVTGNLER--AQSVDFSIPYLRAGIKMLTAAGSDLHTLEDLNSPDVTVSVNRGSTGE 179

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             + +     N     +  +   +        + DA   D + +      ND+      +
Sbjct: 180 ALVTESAPDAN----ILYVDNFTDSVLQVEQGKADAAFEDNTVVEYAASQNDKLEAQEKM 235

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSW 243
               +  P+  A  +GD E+   +  
Sbjct: 236 ---YTSDPICAACRKGDIEFARYLDM 258


>gi|306825135|ref|ZP_07458477.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Streptococcus sp.
           oral taxon 071 str. 73H25AP]
 gi|304432571|gb|EFM35545.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Streptococcus sp.
           oral taxon 071 str. 73H25AP]
          Length = 721

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +F    +          K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKILACLLILFPIFSLGMA----------KADTVKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQSGQADAIMAGMTKTKERE--NVFTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+   +LSG ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKANKITKYEELSGKTVGVKNGTAAQRFLESIKDKYGFS--IKTFDTSD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   +A   D   +         
Sbjct: 164 LMNNSLSAGAVNAIMDDKPVIEYAINQGQD 193



 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 13/191 (6%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               ++    F    ++  + G D+D  +A++     +   I+           A+Q+ Q
Sbjct: 270 IIASDSSFAPFVFQNSSNQYTGIDMDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQ 326

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+ +    F    Y       + +   I+S   L   ++ V+ GT +
Sbjct: 327 ADGIIAGMSVTDARKET--FDFSDSYYTANTILGVKESSTIASYEDLKDKTVGVKNGTAS 384

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +  L +    +  K     F     +  +      DA   D   L        +      
Sbjct: 385 QTFLTENQSKYGYK--IKTFADGASMYDSLNTGSIDAVMDDEPVLKYSISQGKK------ 436

Query: 217 LPDIISKSPLA 227
           L   I+ +P+ 
Sbjct: 437 LKTPIAGTPIG 447


>gi|226358135|ref|YP_002787874.1| amino acid ABC transporter, periplasmic component [Deinococcus
           deserti VCD115]
 gi|226319778|gb|ACO47772.1| putative amino acid ABC transporter, periplasmic component
           [Deinococcus deserti VCD115]
          Length = 257

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + + +     +         +A    DIK  G L+      L  F  V+A    +G++
Sbjct: 1   MKRPYLLPFFAALSALAVLPEASARTFADIKASGVLRVVSGGDLPPFIRVEAE-RHRGYE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A++ ++      + Y  +   +    LQ  + DI       T  RE    + F  
Sbjct: 60  PELIEAVARSLG---LTVSYQVVPPYQLIKELQEDRADIAIGALGITSTRE--NKVDFTM 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            T   G   +      +   + L G SI V AG+  +  +              V+   +
Sbjct: 115 PTACAGVSVVSF-DPKLQKHTDLVGKSIGVGAGSIMQAYVQKLPFEKK----VTVYNSSK 169

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+  A  A + DA         A+K    +    +     + + P+     + +      
Sbjct: 170 ELIFAVMAKQVDATFAYTIMGPAVKSLYPKAP--INFGPELWRVPIGFMTAEDNVTTRTT 227

Query: 241 VSWTHY 246
           ++    
Sbjct: 228 LNGAIN 233


>gi|110806273|ref|YP_689793.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           flexneri 5 str. 8401]
 gi|110615821|gb|ABF04488.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella
           flexneri 5 str. 8401]
          Length = 233

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 20/240 (8%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           I      F+   A GD+ GFD+D    +   +     K  ++  +      +L++K+ID 
Sbjct: 5   IGANPAPFSSKDAKGDFVGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDA 61

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTEL 158
           +  +   T  R     +AF    Y      I  K   I      L G  + V  G+T E 
Sbjct: 62  IISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEA 119

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
              + +++  +    + +   + + +   A R DA   D  A     L      +     
Sbjct: 120 YANETWRSKGVD--VVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAG 177

Query: 219 DIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             +             + + D E     +          EL       ++++K   + +V
Sbjct: 178 SSVKDKKYFGDGTGVGLRKDDAELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 230


>gi|163842150|ref|YP_001626555.1| cystine-binding protein [Renibacterium salmoninarum ATCC 33209]
 gi|162955626|gb|ABY25141.1| cystine-binding protein [Renibacterium salmoninarum ATCC 33209]
          Length = 243

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 63/221 (28%), Gaps = 23/221 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAEV-- 50
            K   V +L  + L      T  S          L  ++ +G +          F+    
Sbjct: 4   RKITLVGLLASLALVVAGCGTGGSTNSNSGGDTSLSAVQSKGEIVIATEGTYKPFSFHEN 63

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G   G+DV   +A++  +      + +        F  L +K+ D ++         
Sbjct: 64  GGSGALTGYDVAIAQAVAGKLGVK---VNFQETQFDGIFAGLDAKRFDAIANQISINP-- 118

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +                  +       I S+  L G +   Q+ T+    LA    A+  
Sbjct: 119 DQQKKYELSTPYTVSTGVIVTKADNNSIKSLEDLKGKTTA-QSLTSNWYKLATDAGAN-- 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  E   +  A  +  R DA   D         T+  
Sbjct: 176 ---VQGVEGWAQSVALLQQGRVDAIVNDNLTYLDFAKTSPD 213


>gi|224823567|ref|ZP_03696676.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224604022|gb|EEG10196.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 262

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 11/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       F     +G  KG +++  + +   +     K Q++ ++      AL++
Sbjct: 24  VVRIGTLADYAPFEYRDPSGQLKGMEIELGQQMCQHM---RVKCQWVTMDFDALIPALKA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
            +ID           R  +  + F  I       ++     GIS     L G ++ VQ+G
Sbjct: 81  HKIDAALAQMSVNPERLKT--VDFSRIFTIAPVQYVAKGLTGISDNPASLRGKTVGVQSG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L     + +      V++ +++     +A R  A   D +          R   
Sbjct: 139 SIHESYLKTRLPSASSGIEMKVYQGLDQAWLDLQAGRIQAVLADSTVGLDWITKEGRKGG 198

Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245
            V++   +S         A A+ +GD           
Sbjct: 199 FVLVGKPVSDPEIFGEGTAVAVRKGDARLKARFDQAI 235


>gi|170025627|ref|YP_001722132.1| arogenate dehydratase [Yersinia pseudotuberculosis YPIII]
 gi|169752161|gb|ACA69679.1| Arogenate dehydratase [Yersinia pseudotuberculosis YPIII]
          Length = 254

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 14/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 1   MKK---LSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL + +     K+ ++  +       L + + DI       T  RE    L+   
Sbjct: 58  VDMANALGANL---KLKVNFVSTSWPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAV 114

Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +           K     ++         + V  G T +  +     A+  +   I  + 
Sbjct: 115 VKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFV----DANIKQAQIIRTKD 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                   R    D    D   +      +  P   
Sbjct: 171 NVANLQGIRDKSADIMFTD--LIEGDYYQSKEPGVF 204


>gi|303250561|ref|ZP_07336758.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|303253515|ref|ZP_07339654.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302647625|gb|EFL77842.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302650549|gb|EFL80708.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
          Length = 239

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S + L                   +   L   +      F      G+  GFD
Sbjct: 1   MKKLLLASAIALTAFSA--------------QAKDLTFAMEPSYPPFELTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   I    +   +          A++ K+ID      D T  R   +   F  
Sbjct: 47  IDIANAICKEI---QANCSFKSQAFDGLIQAVKQKRIDGAISAIDITEARAKQVA--FTD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     ++ VQ GTT +  +    K    +Y P  +  ++
Sbjct: 102 AYYDSSASFIAVKGKADLNTA----KNVGVQNGTTFQQYVVAEAK----QYAPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       S     +       + L  A+ + + E  
Sbjct: 154 DAVLDLKNGRIDIIFGDTAVLADMLSKEAELSFVGDKVTNKKYFGNGLGIAVNKSNGELV 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 AELNKGLAAIKANGEYQ 230


>gi|302531217|ref|ZP_07283559.1| predicted protein [Streptomyces sp. AA4]
 gi|302440112|gb|EFL11928.1| predicted protein [Streptomyces sp. AA4]
          Length = 311

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 69/237 (29%), Gaps = 12/237 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +  A +  DIK  G +  G +        V  NG   GFDVD   A+   +        
Sbjct: 56  AALAALVPADIKADGKIVIGQDQTYPPNEFV-ENGKATGFDVDLGTAVGQVLGVQTE--- 111

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +           + +K+ ++   +      R     +             ++       S
Sbjct: 112 FQNSAFDGIIPGISAKKYEMGISSFTINAER--MQTVDMISYYSAGTSLAVLKGNPDKLS 169

Query: 140 VSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           V  L G ++ VQ GTT    L        KA         F+   +++ A  A R  A  
Sbjct: 170 VDDLCGKNVAVQKGTTQVDDLGKRNTACTKAGKQPIDITQFQAQTDVNLALTAKRVQAEL 229

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            D   +           +          +P    + +G  ++   V      ++   
Sbjct: 230 ADSPVI--DYAVKQTSGQLEAAGAPYDTAPYGIVLPKGSGDFGKAVQGAVQKLIDTG 284


>gi|238019789|ref|ZP_04600215.1| hypothetical protein VEIDISOL_01664 [Veillonella dispar ATCC 17748]
 gi|237863313|gb|EEP64603.1| hypothetical protein VEIDISOL_01664 [Veillonella dispar ATCC 17748]
          Length = 279

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 78/245 (31%), Gaps = 8/245 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K F +  L L +L       + S    +      +       +  ++    NG+  GFDV
Sbjct: 9   KLFAIGALALGVLVVAGCGDDTSKDAKVNPDAKVINVATRGTVRPYSYTDDNGNLTGFDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +     +      + P+     F+A+ + Q+D+++        RE          
Sbjct: 69  ELLKEIERR--NPDLHFNFKPMAVDAAFVAMDAGQVDMIANQMRRNPTRESKYYYTNEVN 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV-E 180
            Y   +  + + +  IS +  L G  I V   +     +  + +  N     I  ++   
Sbjct: 127 NYSTRKLVVKNDRNDISKLDDLKGKKIAVTTSSEFNELVKQFNETANPPIDIIYTDKAGA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        R DA               DR      + D+++  P     +   T+    
Sbjct: 187 ETLNLVATGRADA--AGEYEYVINSAIKDRGLPLKAVGDVLAVVP--TYFLSKRTDDMKQ 242

Query: 241 VSWTH 245
           V+   
Sbjct: 243 VNEKI 247


>gi|307248386|ref|ZP_07530409.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307252994|ref|ZP_07534881.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306855124|gb|EFM87304.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306859523|gb|EFM91549.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 244

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S + L                   +   L   +      F      G+  GFD
Sbjct: 6   MKKLLLASAIALTAFSA--------------QAKDLTFAMEPSYPPFELTNEKGEIIGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   I    +   +          A++ K+ID      D T  R   +   F  
Sbjct: 52  IDIANAICKEI---QANCSFKSQAFDGLIQAVKQKRIDGAISAIDITEARAKQVA--FTD 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     ++ VQ GTT +  +    K    +Y P  +  ++
Sbjct: 107 AYYDSSASFIAVKGKADLNTA----KNVGVQNGTTFQQYVVAEAK----QYAPKSYASLQ 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       S     +       + L  A+ + + E  
Sbjct: 159 DAVLDLKNGRIDIIFGDTAVLADMLSKEAELSFVGDKVTNKKYFGNGLGIAVNKSNGELV 218

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 219 AELNKGLAAIKANGEYQ 235


>gi|304395997|ref|ZP_07377879.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304356366|gb|EFM20731.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 258

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 80/250 (32%), Gaps = 23/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++   + +  +  +              L+ G+ +    F    A G+ +GFD
Sbjct: 1   MKK--LNALFLALGMMTSVQALAQD----------LRYGVESQYPPFESRNAKGELEGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+  A         ++  +      ALQ+K+ D ++   + T  R  S+    +P
Sbjct: 49  IELGNAICKA---GNFSCHWVESSFDALIPALQAKKFDAINSAMNITEARAKSIAFT-QP 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I          + +    +   L G +I V  G+  E     +++          ++   
Sbjct: 105 IYRIPTMLVAKNGENLAPTADSLKGKNIGVLQGSIQETYAKKHWETQG--VTVTSYQDQN 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDT 235
           ++     A R D      +A  +  L   +      +   +         +   + + D 
Sbjct: 163 QVYNDMVAGRLDGTLVMSAAGQSGFLDKPQGKGFGFVGKPVEDDAILGSGIGYGLRKDDA 222

Query: 236 EWYNIVSWTH 245
           +    +    
Sbjct: 223 QLKQSLDAAI 232


>gi|206579939|ref|YP_002239816.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288936654|ref|YP_003440713.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290510294|ref|ZP_06549664.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
 gi|206568997|gb|ACI10773.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288891363|gb|ADC59681.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289777010|gb|EFD85008.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 283

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 13/260 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L  ++    S+   A+ L +I+K G LK         F  +  NG   GF+
Sbjct: 1   MKKSLASMCLSAVLTVAFSYHAVAADLPEIEKSGTLKVATEDDYAPFNFMN-NGQADGFN 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    L          +    L       A+ + Q D+       T  R       F P
Sbjct: 60  KDMLEELRK---YAKFHVDQSILPWTGLLAAVSTGQYDMALTGAVITDERLKV--FDFTP 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIV 175
                   F+       +++++ LSG  + +QAG+     L +      K        + 
Sbjct: 115 PWASAQHYFVKRAGDTSLNTIADLSGKKVGLQAGSALLARLPELKAMLEKTGGKLGPVVE 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +    E  A     R D        +    L   +P        +     +A  I +   
Sbjct: 175 YPSYPEAYADLANKRLDYVI--NVVISVNDLAKAKPKVFAKGLAVSGPGYMAWPIPKNSP 232

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           +    ++     M    +L 
Sbjct: 233 QLLAYMTKFMNHMKETGKLA 252


>gi|170016705|ref|YP_001727624.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803562|gb|ACA82180.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 479

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 75/252 (29%), Gaps = 15/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +      F    ++ AS               +     F     N ++ G +
Sbjct: 3   MLKKCLLGLATFAAFFTFVSTSQASEP-------HYTITTDATYAPFTFQDKNNNYVGIE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  +A++     +       P++       + + Q D +      T  R+      F  
Sbjct: 56  QDMMQAIAKR---EGFTYTMKPMSFNSAAQLVSNGQADGIIAGMSITPERKEV--YDFAT 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G  +I+     I  ++ L G ++ ++ GT            +    +   F   +
Sbjct: 111 PYYKTGVAWIVKNNSTIKQLADLKGKTVALKTGTAASEYGKSLQSKYGF--NVKYFNDTD 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A   D+  +    + N    + +   +  +      A+ +G  +    
Sbjct: 169 TMYNDVAVGNSAATFEDMPVIQ-YAIKNGMKLKIMNADNPGNAGWYGFAVQKGKNKALLA 227

Query: 241 VSWTHYAMVTAE 252
                +A + A+
Sbjct: 228 AFNKGFAAIKAD 239


>gi|306828734|ref|ZP_07461926.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Streptococcus mitis ATCC
           6249]
 gi|304428912|gb|EFM32000.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Streptococcus mitis ATCC
           6249]
          Length = 280

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGF-------LKCGINTGLVGFAEVKA 52
           M K   + S+  L ++     +  +         G        +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGLLAACSGGEKKDAASGEATSGKKEIIVATNGSPKPFIY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D  ++++        F  L S +  +   N  +T  R  
Sbjct: 60  NGELTGYEIELIRAIFKD--SDKYEVKFEKTEWSGIFPGLDSDRYQMAVNNLSYTKERAE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +   T  +    ++ K    I S+  + G S  V  GTT+   L +Y K H    
Sbjct: 118 --KYLYAAPTAKNPNVLVVKKDDDSIKSLDDIGGKSTEVVQGTTSAKQLEEYNKQHADNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I +     + D    D        + N       ++     + P    
Sbjct: 176 TVLNYTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|282882693|ref|ZP_06291303.1| amino acid ABC transporter [Peptoniphilus lacrimalis 315-B]
 gi|281297506|gb|EFA89992.1| amino acid ABC transporter [Peptoniphilus lacrimalis 315-B]
          Length = 296

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 71/227 (31%), Gaps = 42/227 (18%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------------------------TNASILGDIKKR 33
           M K F V  L  ++    + S                            + S L DIK +
Sbjct: 2   MKKVFMVISLLALVFTLVACSGSQENANKAINEAAKNAKQENTEANKDASDSSLEDIKAK 61

Query: 34  GFLKCGINTGLVGF---AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G +  G +         +       +KG D++  +A++ ++      ++   +  +    
Sbjct: 62  GKIVLGTSADFPPLEWVSYKDGGESYKGLDIEIAKAIADSLGVK---LEIKNMAFEGLIT 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASI 148
           +L +  +D++    + +  R+    + F    Y  GQ  ++  +      ++  L G  I
Sbjct: 119 SLNAGDVDMIIAGMEASDERKK--EVDFSAPYYSGGQSLVVRAEDKDKFKTLDDLKGHKI 176

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
             Q  T     +   F           ++    +    +    DA  
Sbjct: 177 GTQLNT-----VQQTFAEEKFGSDVQGYDLNNVLIEQLKNKSVDALF 218


>gi|56961808|ref|YP_173530.1| glutamine ABC transporter substrate-binding protein [Bacillus
           clausii KSM-K16]
 gi|56908042|dbj|BAD62569.1| glutamine ABC transporter substrate-binding protein [Bacillus
           clausii KSM-K16]
          Length = 266

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/265 (10%), Positives = 78/265 (29%), Gaps = 33/265 (12%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48
           M      + +   +L   +               +   +   +         +   V F 
Sbjct: 1   MTIRIGTAFVASAVLVLAACNNSETGTSDHTGGADGDNVETYQ------VATDNNFVPFE 54

Query: 49  EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
            +     +  GFD++  +A++         +++  ++       ++    D        T
Sbjct: 55  FIDLETNELTGFDIELMKAIAEEAG---FAVEFQQMDFSGALSGIEQGSYDAAINGMTIT 111

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFK 165
             R+    + F    Y  G    + ++  +        S   +  +  +T++  L D  +
Sbjct: 112 EERKE--NIDFSDPYYESGLVLTVAEEDDVIESIDDITSSTKVATRLSSTSQTYLEDNTE 169

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A         +  + E   A  A   DA   D+       +      +  ++ + ++   
Sbjct: 170 A-----QVDAYPEITEAYQALLAGHVDAVLYDMP-NVQYFMQQQGEGQMKMVGERLTGEE 223

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVT 250
              A  +G ++    V+     ++ 
Sbjct: 224 YGIAFPKG-SDLVEPVNEALATLME 247


>gi|121603937|ref|YP_981266.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120592906|gb|ABM36345.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 250

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 79/248 (31%), Gaps = 17/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L +      S + +A           LK G       F  +        G 
Sbjct: 1   MKFATLATSLAVTFALSLSGAASAQT--------VLKVGSTPTGSPFTFLDTKTNTIDGV 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD   A++         +Q  P+       +L SK+ID++S     T  R+  +  +  
Sbjct: 53  MVDIVNAVAKESG---FGVQIEPMQFSALISSLTSKRIDLISAAMFITPTRQEVVDFSLP 109

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +Y +G   +        S + L G  + VQ GT       D  +   +     ++E  
Sbjct: 110 IYSYGEGVVVLKQDTVAYQSFADLKGKRVGVQVGT----AFVDPLQKSGLFSEVKLYETT 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWY 238
            ++     A R DA   D             P+  ++        + +  A  +GDTE  
Sbjct: 166 SDLMRDANAGRIDAGVLDYPIAAFAVAKGQFPNLRMVTSFKPTMVNSIGMATRKGDTELM 225

Query: 239 NIVSWTHY 246
             V+    
Sbjct: 226 GKVNAAVT 233


>gi|226322423|ref|ZP_03797941.1| hypothetical protein COPCOM_00194 [Coprococcus comes ATCC 27758]
 gi|225209145|gb|EEG91499.1| hypothetical protein COPCOM_00194 [Coprococcus comes ATCC 27758]
          Length = 301

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 86/270 (31%), Gaps = 29/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKK--RGF-LKCGINTG 43
           M K     ++C  ++        +                  ++K   +G  LK G    
Sbjct: 26  MKKRLIAVLMCAAMVTVLGAGCGSKKEDTKETSDTKKEYTEDELKDSMKGVKLKVGTTGL 85

Query: 44  LVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              F     +G    G+DVD    L   +           ++      +L   ++DI + 
Sbjct: 86  FGPFTYYDEDGKTLIGYDVDLLNDL-QELLGFEIDGGLQAMDYSALTTSLAENKLDIGAA 144

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTL 160
               T  R+  +   F  I    GQ  +++K     I SV  L    I V+ GT +    
Sbjct: 145 ALCATDERKEVM--DFSDIYCDSGQVVMVNKNDDKGIKSVDDLKDKKIAVEKGTASHTYA 202

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
           +     +       V + +     +    + DA   D    Y    T    +  V+  + 
Sbjct: 203 S----KNLTSATLEVHDTITTAYESLEQGKVDAVIQDGPGAYFYIKTTSDSNLEVVGDEF 258

Query: 221 IS-KSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              ++P     I  + ++Y+ ++     ++
Sbjct: 259 NQGQAPY-CVAISKECKYYDEINAAVKVLI 287


>gi|207092714|ref|ZP_03240501.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Helicobacter pylori HPKX_438_AG0C1]
          Length = 220

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 90/206 (43%), Gaps = 9/206 (4%)

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           + + G ++G+DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N   T  
Sbjct: 1   MDSKGKYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKE 60

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           RE    + F         G I  K   I ++ +L    + V  GTT +      F  +  
Sbjct: 61  REKV--VDFAKPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYP 113

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + FE+  E   +   ++  A   D + L A       P   + +  +  K  +APA
Sbjct: 114 NIKLLKFEQNTETFLSLLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPA 171

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           I +G+ +    ++    ++++++ L 
Sbjct: 172 IKKGNPKLLEWLNNEIDSLISSDFLK 197


>gi|16799914|ref|NP_470182.1| hypothetical protein lin0840 [Listeria innocua Clip11262]
 gi|16413291|emb|CAC96072.1| lin0840 [Listeria innocua Clip11262]
 gi|313619849|gb|EFR91431.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria innocua FSL S4-378]
          Length = 480

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 85/281 (30%), Gaps = 14/281 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   IL + +     F    + L           G +T    F   + +G   G D
Sbjct: 1   MKK-FSRFILTMAVACVAMFIFTGNGLNAKAAEETYLIGTDTTFAPFEF-EKDGKHVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++        K +   +       AL++ Q+D +      T  R+      F  
Sbjct: 59  MDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKFDFSD 113

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    I+     I +   L G  + V+ GT            +      +VF+  
Sbjct: 114 PYFDSGVVMGILKDNDEIKNYDDLKGKKVAVKTGTEGYAFAEKIKDKYGFD--IVVFDDS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++    +     A   D   L     T    +   I+ +    +    A+ +G  +   
Sbjct: 172 AQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGQNQELL 228

Query: 240 IVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGI 279
                    + A  E     +          N   + F+GI
Sbjct: 229 KKFNAGLVNIKASGEYDKILETYLGKDAVKENTTEKGFMGI 269


>gi|302548268|ref|ZP_07300610.1| putative amino acid ABC transporter [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302465886|gb|EFL28979.1| putative amino acid ABC transporter [Streptomyces himastatinicus
           ATCC 53653]
          Length = 264

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 70/214 (32%), Gaps = 11/214 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K G L    +     F   +      GFDVD    ++S +      +   P    +    
Sbjct: 39  KSGKLTTCTHLPYPPFQSRQGK-KIVGFDVDLVDLVASELKVKQEIVD-TPFEGIQSGED 96

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L +   D+ +     T +RE    L F    +   Q  +  K K   +++ L G  + VQ
Sbjct: 97  LNTSTCDVAAAGMTITAVREK--NLDFSRPYFEATQALLTRKGKPYRTLADLKGKRLAVQ 154

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT E           +    + FE +  + +A +  +  A   D   LY         
Sbjct: 155 QGTTGETYAQKRA----VGATLVQFEDLGLLVSAVKTGQVAAGINDNGVLYDF---VKDN 207

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  +  +  +      A+  G+      ++   
Sbjct: 208 PDTEVTAEFSTGEKYGIAVRTGNDALRKKINQVL 241


>gi|186477770|ref|YP_001859240.1| arogenate dehydratase [Burkholderia phymatum STM815]
 gi|184194229|gb|ACC72194.1| Arogenate dehydratase [Burkholderia phymatum STM815]
          Length = 260

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 76/267 (28%), Gaps = 19/267 (7%)

Query: 1   MYKDFFVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   + +  L+        T+    AS L +I  RG L+         ++  K +G +
Sbjct: 1   MKKATMLFVSALVCAGAVHAQTAAPAPASRLDEILARGTLRACTTGDYKPYSFYKQDGQF 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D+D   +L+ ++        ++  +         S + D+       TL  +     
Sbjct: 61  EGIDIDMTESLARSLGVKAE---FVKTSWSNLMNDFVS-KCDVGVGGVSTTL--DRQKRA 114

Query: 117 AFRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F      DG+  I+         +          +    G T E     +         
Sbjct: 115 FFTVAYQVDGKSPIVRCDDVDKYQTVAQIDQPSTRVIFNPGGTNERFARQFL----SHAK 170

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             V+     I     A + D    D S    L+   +     V           A  + +
Sbjct: 171 LTVYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKAWLVPR 229

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259
           GD  +   V    +      E      
Sbjct: 230 GDVVFQQYVDQWLHLARATGEYQSISD 256


>gi|294788706|ref|ZP_06753947.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Simonsiella muelleri ATCC 29453]
 gi|294483188|gb|EFG30874.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein
           [Simonsiella muelleri ATCC 29453]
          Length = 275

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 72/259 (27%), Gaps = 25/259 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAEVK 51
           M K         ++L       N +          L  I  +  L  G       F   +
Sbjct: 6   MLKQTIFCAAVTLLLAACGGQDNQATTPKSVSDSLLDKINNKQTLFVGTMGTYPPFTYHE 65

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   G+DV+  RA++  +      +++           L++++ D+++     T   E
Sbjct: 66  KDGKLTGYDVEVTRAVAKKLG---VSVEFKETPWDAMMAGLKAERFDLVANQVALT-SPE 121

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                       + G+  +       IS +  + G    V   +  +        A  M 
Sbjct: 122 RQAMFDKAEPYSWSGKMIVARHDHAPISKLEDIKGIKTAVMLASNYDEI------AKKMG 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL---A 227
              +  + + +     +  R  A       L  L      P+  +               
Sbjct: 176 ADLVHTDTMAQGLINVQQKR--AEITLNDELSLLDYLKKNPNSGLKSVWRTPAEEKLGAG 233

Query: 228 PAIIQGDTEWYNIVSWTHY 246
             + + + E    ++    
Sbjct: 234 LVMNKDNDEALQKINNAMK 252


>gi|325000919|ref|ZP_08122031.1| cyclohexadienyl dehydratase [Pseudonocardia sp. P1]
          Length = 263

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 71/251 (28%), Gaps = 18/251 (7%)

Query: 1   MYKD--FFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +   F  ++L  + +     +    ++  L  I + G L+            + A+G 
Sbjct: 1   MRRRRGFLSTVLLSVAVLTGCGTGDQVDSPALARIAESGELRVCSTGDYRPLTHLAADGT 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           W G DVD  R L++ +    ++   +          + + + DI       T   + +  
Sbjct: 61  WSGIDVDMARDLAAELG---ARTTMVETTWSGLLDDVVAGKCDIAVGGVSITP--DRAER 115

Query: 116 LAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            AF      DG+  I+           +     G    V  G T E     + + +    
Sbjct: 116 AAFTIPYLRDGKTPIVRCPDAERFRTVADIDRPGVRAVVNPGGTNE----RFARENLRNA 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             +       I         D    D                 V   D  + S  A    
Sbjct: 172 TIVPHPDNNTIFDVVADGGADLMVTDAIETRWQAAQRPGELCAVHPEDPFTDSEKAYLTQ 231

Query: 232 QGDTEWYNIVS 242
            GD  +   V 
Sbjct: 232 AGDPAFTQRVD 242


>gi|167904844|ref|ZP_02492049.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei NCTC 13177]
          Length = 261

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 79/266 (29%), Gaps = 18/266 (6%)

Query: 1   MYKDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +  F    C  +            AS L D+  RG L+         +   + +G ++
Sbjct: 3   MNQTLFALACCAGLAHAQTAPQPGAPASRLDDVLARGTLRVCTTGDYKPYTYRREDGAFE 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D   +L+ ++    + ++       + F+A    + DI       TL R+    + 
Sbjct: 63  GIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQK--RVF 116

Query: 118 FRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           F      DG+  I+           +        + V  G T E     +F         
Sbjct: 117 FTQPYVSDGKTPIVRCADAERYQTIAQIDQPQTRVIVNPGGTNERFAKQHFTRAK----L 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            VF     I     A   D    D S    L+   +     V           A  + +G
Sbjct: 173 TVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRG 231

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D  +   V    +      EL     
Sbjct: 232 DVVFQQYVDQWLHLARETGELRAISD 257


>gi|115375368|ref|ZP_01462631.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367652|gb|EAU66624.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 435

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 72/204 (35%), Gaps = 9/204 (4%)

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG   GFDVD  R L+  +       Q++ ++       L S + DI+  + + T  R 
Sbjct: 5   ENGQPVGFDVDLSRELARRLGVTA---QFIVMDWDGILAGLTSGRYDIIVSSMNITPER- 60

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               + F        Q F+  + + I +  +L+G  + VQ  TT++  +    +      
Sbjct: 61  -LQQVDFI-EYARLSQVFVTTRGQSIRTEQELAGHRVAVQTNTTSQRWVERLQQRGVHVR 118

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               F    E  +A +A + D    D            R    V+    +   P+  AI 
Sbjct: 119 EIRPFPGATECFSAVKAGQADVIVIDEPVGLFF---ARRDDAFVMTGKALDAEPIGIAID 175

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           +   +    ++     +  + E  
Sbjct: 176 KKAPDLTAALTRALQDIRDSGEQK 199


>gi|300791009|ref|YP_003771300.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299800523|gb|ADJ50898.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 299

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 12/232 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            D+K  G +  G +           NG   GFDVD   A+   +     ++++   +   
Sbjct: 53  ADVKADGKILVGQDQSYPPNEFQD-NGKAAGFDVDLGTAIGQVLG---VQMEFQNASFDG 108

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               + SK+ ++   +   T  R     +             ++        V  L G  
Sbjct: 109 IIPGIGSKKYEMAMSSFSITSER--LQTVDMISYYKAGTSLGVVKGNPDGIKVDDLCGKK 166

Query: 148 ICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           + VQ GTT    L    A    A          +   +++ A  A R  A   D      
Sbjct: 167 VAVQKGTTQVEDLDKKNAACTGAGKPAIDVTQLQAQTDVNLALTAKRVQAELADSP--VV 224

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                       ++ +    +P    + +   ++   V      ++ +    
Sbjct: 225 DYAVKQTNGALEVVGEPYDTAPYGIVLGKNSGDFGKAVQGAVQKLIDSGAYK 276


>gi|257440786|ref|ZP_05616541.1| putative amino acid ABC transporter, amino acid-binding protein
           [Faecalibacterium prausnitzii A2-165]
 gi|257196760|gb|EEU95044.1| putative amino acid ABC transporter, amino acid-binding protein
           [Faecalibacterium prausnitzii A2-165]
          Length = 280

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 91/290 (31%), Gaps = 33/290 (11%)

Query: 1   MYKDFFVSILCLIILFFTSF-----------------------STNASILGDIKKRGFLK 37
           M +     +   + L   +                         T  S L  IK +G L 
Sbjct: 1   MKRLVSAFLAGAMALSLAACGGAASTSTAASASASASGSAAVSQTAGSDLDYIKGKGKLV 60

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G            A+G++ GFD +   A+   +  +P    ++ +N   + + L +K I
Sbjct: 61  IGYTV-YEPMNYTDADGNFTGFDTELATAVCEKLGVEPE---FVEINWDTKVVELDAKSI 116

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D +      T   +I    A       + Q  ++      +S + L G ++  +AG+  E
Sbjct: 117 DCIWNGMTLTD--DIMQNAATTKAYAKNAQVVVVKDGTDYTSTADLVGKTVVAEAGSAGE 174

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +      +  +   +      +      A   DA   D++   A+       ++  I+
Sbjct: 175 AAIE--GDENLAQADYVSKSVQTDCLMEVAAGTADAAVLDLTLANAMIGEGTDYADLKIV 232

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
            ++ ++     A  +G       V     A+     +       +    D
Sbjct: 233 DELNAEE-YGVAFRKGSDA-AAAVDEAFDALKADGTMQALADKYDLALAD 280


>gi|238797105|ref|ZP_04640607.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia mollaretii ATCC 43969]
 gi|238718952|gb|EEQ10766.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia mollaretii ATCC 43969]
          Length = 256

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 75/254 (29%), Gaps = 21/254 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +I++   S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 3   MKK---LSLGIMIVVLIGSQPVLAKSWQEIKQSGELRIGVPGDYAPLAFHDKQGQLVGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  ++L+ ++      + ++  +       L + + DI       T  R     L+   
Sbjct: 60  VDMAKSLADSL---KLNVTFVATSWPTLSDDLVADKFDIAMGGVTETPGRAAQFALSSAV 116

Query: 121 ITYFDG--QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +             KK    +        + V  G T +  +    K        I  + 
Sbjct: 117 VKNGKIALANCQQAKKFPTLAAIDREAVKVIVNPGGTNQSFVDANIKKA----QIIRTKD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQG 233
                   R    D    D   +      +  P         ILP   S       + + 
Sbjct: 173 NVANLQGVRDQSADIMFTD--LIEGDYYQSKEPGIFCVATPEILPGTGSYKVY--MMAKD 228

Query: 234 DTEWYNIVSWTHYA 247
           +    + V+     
Sbjct: 229 NQPLLDEVNQWLTG 242


>gi|219871256|ref|YP_002475631.1| amino acid ABC transporter/signal transduction systems, periplasmic
           component [Haemophilus parasuis SH0165]
 gi|219691460|gb|ACL32683.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Haemophilus parasuis
           SH0165]
          Length = 241

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 80/257 (31%), Gaps = 27/257 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L    +   +                +   +      F +    G+  GFD
Sbjct: 1   MKKLLLATVLAATAVSAYA-------------NDKITFAMEPSYPPFEQTNEKGEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +  ++   +      +L   +    +  +   +    +  +AF  
Sbjct: 48  VDIANAICKEV---QATCEFKSQSFDSLIPSLIKGRGGFDAAISAIDITEARAKQVAFSA 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     +I  + K ++S       ++ VQ GTT +       K    +Y    +  ++
Sbjct: 105 PYYESSASYIALQGKDLASAK-----TVGVQNGTTYQQYATAEAK----QYQAKSYASLQ 155

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD   L  +             +       + L  A+ + +TE  
Sbjct: 156 DAILDLKNGRIDLIFGDTDVLRDMLGKIPEAQFVGEKVTDKRYFNNGLGIAVKKSNTELV 215

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+  + E  
Sbjct: 216 EKLNKGIAAIKASGEYQ 232


>gi|146318681|ref|YP_001198393.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|145689487|gb|ABP89993.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
          Length = 437

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 97  LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 149

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 150 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 207

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 208 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 265

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253
             D      L     +                  A+ +G + E   + +    A+V + +
Sbjct: 266 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESSK 322

Query: 254 LG 255
             
Sbjct: 323 YD 324


>gi|330427239|gb|AEC18573.1| glutamine ABC transporter periplasmic protein [Pusillimonas sp.
           T7-7]
          Length = 251

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 73/228 (32%), Gaps = 13/228 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            + +   L    +T  V F   + +G + GFD++   A++             P++    
Sbjct: 24  AVAQDKELLVATDTAFVPFEFKQ-DGKYTGFDIELWDAIAKEAGFKY---SLRPMDFNGI 79

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGAS 147
              LQ++ ID+           +    + F    Y  G    + +    I++   L G  
Sbjct: 80  IPGLQTRNIDVALAGITI--RDDRKKVIDFSDPYYESGLAILVNNDNNNITTAKDLDGKM 137

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V+ GT T     DY K +       +F  ++         R DA   D   L      
Sbjct: 138 VAVKIGTATV----DYLKENVPGAKLKLFPNIDNAFLELATGRVDAVVHDTPNLQ-YFAK 192

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   ++  + S      A  +G +E    V+     +    +  
Sbjct: 193 TGGKDRVKVVGSLKSGDYYGIAFPKG-SELVPAVNKALKTLQDNGQYD 239


>gi|288959643|ref|YP_003449984.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288911951|dbj|BAI73440.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 284

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 72/251 (28%), Gaps = 40/251 (15%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++         +    ++G   GF+VD    L   +       +++  +      
Sbjct: 28  KDWKTVRIASEGAYPPWNATDSSGKLTGFEVDLANDLCKRM---KVTCEFVAQDWDGIIP 84

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-------- 142
           ALQ  + D +      T  R+    + F      +   F +     ++            
Sbjct: 85  ALQQGKYDAIMSAMTITDERKKV--IDFSAPYGTEPSVFAVMTSSPLAKALNLGAERVDL 142

Query: 143 ----------------LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                           L G S+ VQ  T      AD+   H  K     +E+V+   +  
Sbjct: 143 NDQGKAKPTLDKLAEVLKGKSVGVQVSTIQ----ADFMDKHLPKVTMRTYEKVDNAGSDL 198

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SPLAPAIIQGDTEWYNIVSWT 244
            A R DA  GD S + A+          V    I       +   + +   +        
Sbjct: 199 DAGRVDAMLGDRSVVEAIVKATPGKMVIVGPNFIGGVIGEGMGIGLRKDSADLK-----A 253

Query: 245 HYAMVTAEELG 255
            +    AE L 
Sbjct: 254 MFDKAIAEALK 264


>gi|94676838|ref|YP_588662.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219988|gb|ABF14147.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 260

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 74/262 (28%), Gaps = 16/262 (6%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M        +S +  I  F ++ +  A  L  +K    +  G       +    +N    
Sbjct: 1   MKNINQVLVLSYIFFISAFISAETLAAEELVALKSANIITFGTEGTYAPYTYHDSNDKLV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   A+++ +       +++          L SK+ D +      T  R++     
Sbjct: 61  GFDVDLGYAVAAHLGMKA---KFIEGRWDGLIAGLDSKRYDAVINQVGITPERKV--KYD 115

Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +       I++ + L       Q  T+    LA  + A       +  
Sbjct: 116 FSQSYIASKVVIVTRNDNTTINNFNDLKNQKSA-QNLTSHYSQLARKYGA-----DIVPT 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +        R      D  +    K         V+  +     P    + +G  E
Sbjct: 170 DNFNQSIELVITGRAAVTLNDYLSFLDFKKHKPDAKVKVVALEATHS-PSGIMLRKGQPE 228

Query: 237 WYNIVSWTHYAMVTAEELGITQ 258
               ++     +       I  
Sbjct: 229 LVAAINRALDDIKANGTYKIIS 250


>gi|308178920|ref|YP_003918326.1| cyclohexadienyl dehydratase [Arthrobacter arilaitensis Re117]
 gi|307746383|emb|CBT77355.1| cyclohexadienyl dehydratase [Arthrobacter arilaitensis Re117]
          Length = 279

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 18/253 (7%)

Query: 5   FFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN- 53
             V    L +   ++ +          ++++ L  + + G LK         F  +  + 
Sbjct: 17  LLVLCAALFLSSCSAPAPESGDVQKPVSDSTRLDSVVETGTLKVCTTGDYRPFTYLDPDS 76

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G D+   + L+  +  +P    ++  + K+      S + D+       ++ R   
Sbjct: 77  GEWSGIDITMAKNLAETMGVEPE---FIQTSWKDLMPDFLS-KCDMAVGGVSISMERAQQ 132

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              +   +        +    +   ++ +++     V++ T    T   +  A+      
Sbjct: 133 AYYSEATLDEGKTPITLCENVEKYDTIKEINQP--GVRSITPIGGTNEKFADANYPDGEI 190

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I FE   +I     A R D  T D S               V      + S  A  +  G
Sbjct: 191 IRFEDNNKIFDEIIAGRADVMTTDASETR-WVANEHPELCAVHPDKPFNFSQKAYLLPLG 249

Query: 234 DTEWYNIVSWTHY 246
           D E+   V+    
Sbjct: 250 DDEFQEYVNQWLN 262


>gi|301630240|ref|XP_002944230.1| PREDICTED: glutamine-binding periplasmic protein-like [Xenopus
           (Silurana) tropicalis]
          Length = 260

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 76/242 (31%), Gaps = 17/242 (7%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           + L  +     +   +A  L  IK+R  +   ++ G   +  + A+    G DV+    L
Sbjct: 13  ATLAAVCTLAAALPAHADTLDTIKQRRKILIAVDIGAPPYGMLDASARQVGSDVEAAHLL 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +   ++ +P++   R   L SK+ D++  +   T  R+    + F         
Sbjct: 73  AKDLGVE---LEIVPVSGPNRVPFLLSKKADVVMASFSITDERKKV--IDFSAPYGVVPV 127

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                    +     L+G SI V  GTT+++ L    K                   A  
Sbjct: 128 VVAGPTGVKLVGFGDLAGKSIAVTRGTTSDMELTRGVKXXXXXXXXXXXXXXXXXXLAAA 187

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
                A                 P+  ++    +   P    + + +      +     A
Sbjct: 188 PSVIPAV------------KKANPARDIVNKFTMKSYPYGIGLRKDEVALKAWLDGWVKA 235

Query: 248 MV 249
            +
Sbjct: 236 NL 237


>gi|322392484|ref|ZP_08065944.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus peroris ATCC 700780]
 gi|321144476|gb|EFX39877.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus peroris ATCC 700780]
          Length = 280

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 83/258 (32%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGF-------LKCGINTGLVGFAEVKA 52
           M K   + S+  L ++     +  +         G        +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGEKKDAASGEASSGKKEIIVATNASPKPFNY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   +++        F  L + +  +   N  +T  R  
Sbjct: 60  NGELTGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVNNISYTKERAE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H  K 
Sbjct: 118 --KYLYAAPTAKNPNVLVVKKDDNSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHADKP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I +     + D    D        + N       ++     + P    
Sbjct: 176 TVLNYTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIDLPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|295100610|emb|CBK98155.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 279

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 81/257 (31%), Gaps = 31/257 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------------------TNASILGDIKKRGFLKC 38
           M +     +   + L   +                           S L  I+  G +  
Sbjct: 1   MKRLVSAFLAGAMALSLAACGGSASTSTAASSAAASAAPASSAAADSDLAYIRSNGKMVI 60

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           G            A+G + GFD +   A+   +  +P    ++ +N   +   L +K ID
Sbjct: 61  GYTV-YEPMNYTDADGSFTGFDTELATAVCEKLGVEPE---FVEINWDTKETELAAKSID 116

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
            +      T  RE ++          + Q  ++      +S + L G ++  +AG+  E 
Sbjct: 117 CIWNGLTLTDDREENMAC--TKPYVKNAQVVVVKDGTDYTSTADLIGKTVVAEAGSAGET 174

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           T+ +        +     +   +      A   DA   D++   A+       +   ++ 
Sbjct: 175 TITENADLSQADFISKAVQT--DCLMEVAAGTADAAILDLTLASAMIGEGTDYANLKMVD 232

Query: 219 DIISKSPLAPAIIQGDT 235
           ++  +     A  +G  
Sbjct: 233 ELNVEE-YGVAFRKGSD 248


>gi|251781764|ref|YP_002996066.1| ABC transporter amino acid-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390393|dbj|BAH80852.1| ABC transporter amino acid-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 528

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 86/296 (29%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A          +L+ G+      F      A+     
Sbjct: 7   MKKLILSCLVALALLFGGMSQAQADQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 58

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 59  IEGTSQYANGYDVQVAKKIAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTD 115

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++    K  G +S+   + A +  Q G      L     
Sbjct: 116 ERRK--EITFSNSYYTSEPVLVVAADGKYAGATSLDDFANAKVTAQQGVWHVNLLTQLKD 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  +       +         
Sbjct: 174 AKLQT----PMGDFSQMRQALSSGVIDAYISERPEAMTAEAADSHFKMITLKKGFTVSES 229

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + +      V+         + + +    + +   +    D +  FLG
Sbjct: 230 DAAIAVGMKKNDNRIATVNQVLEGFSQTDRMALMDDMVTKQPMEKKAEDAKASFLG 285


>gi|254384680|ref|ZP_05000019.1| glutamine-binding periplasmic protein [Streptomyces sp. Mg1]
 gi|194343564|gb|EDX24530.1| glutamine-binding periplasmic protein [Streptomyces sp. Mg1]
          Length = 319

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 17/243 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +    +++   I+  G +K G ++       V   G   G D D   AL   +       
Sbjct: 54  AAPLFSALPKKIQDAGVIKVGTDSAYAPMEFV-EGGKIVGVDPDIAEALGKQLGVK---F 109

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGF 129
           ++          ++ + + D++  +      R+            G+ F    +  G   
Sbjct: 110 EFTAGTFDGLITSIYTGRQDVIMSSITDNKKRQEGLDDKGQKIGKGVDFVD-YFSSGLSL 168

Query: 130 IMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAY 186
           ++ K     I S+  L G ++ VQ GT  E T     +    K      F+   E     
Sbjct: 169 LVKKGNPEGIKSMDDLCGKTVAVQRGTIYEDTFKAQAEKCGDKKLTIQAFDTDAEAQTRV 228

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +A    A   D         T+   ++  I             + + +T+  + +     
Sbjct: 229 KAGGAVADLNDYPVAAYTVKTSGGGNDFEIAGQQSDVGLFGIGVSKENTQLRDALKQALD 288

Query: 247 AMV 249
           A +
Sbjct: 289 AAI 291


>gi|152978299|ref|YP_001343928.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Actinobacillus succinogenes 130Z]
 gi|150840022|gb|ABR73993.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Actinobacillus succinogenes 130Z]
          Length = 240

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 80/257 (31%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L  +     +                ++  +      F       +  GFD
Sbjct: 1   MKKLIIAVLLAGVAFATQAR--------------EIRFAMEPSYPPFELTNEKNEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +          A++ K+ID      D T  R  S  + F  
Sbjct: 47  VDLANAICKEI---QANCTFSSHAFDGLVQAVKQKRIDAAMSAMDITEAR--SKQVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     +I VQ GTT +  +    K    +Y P  +  ++
Sbjct: 102 PYYDSSASFIAVKGKVDLNSA----KNIGVQNGTTFQQYVVAEAK----QYTPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       +     +       + L  A+ +   +  
Sbjct: 154 DAILDLKNGRIDIIFGDTAVLADMLSKEKDLTFVGEKVTNKKYFGNGLGIAVNKSAQDLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+  + E  
Sbjct: 214 AELNKGLAAVKASGEYQ 230


>gi|325124980|gb|ADY84310.1| Putative glutamine ABC transporter [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 527

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 109/331 (32%), Gaps = 59/331 (17%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55
           M K   +  +++  ++    + S +       +  G LK G+      +   +   ANG 
Sbjct: 1   MKKHSSWISALMAAVLTLVLAVSWSQPA----QASGTLKIGMEANYAPYNWTQTTSANGA 56

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            K         G+DV   + ++  +      +            AL S +ID++      
Sbjct: 57  VKIDGTSSYANGYDVKIAKIIAKKLGKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSP 113

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLADY 163
           T  R     + F           I++K+   +    L    GA +  Q GT     +   
Sbjct: 114 TAERRK--AINFTSPYRTTNFVVIVNKQSKYAKAKYLTNFKGAKLTAQQGTLHYDLIKQL 171

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A          +    +  +  A   D Y  + + L + ++ +        S+     
Sbjct: 172 PGAKREP----ASKDFAAMRESLEAGTIDGYVAEDTELTSFQMVDSNITGVNLSKMKGFK 227

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
              S + ++  + +G+ +  + V+     + T+E   + ++ + Q  + +T  +      
Sbjct: 228 VSSSDAEVSIGVKKGNDQLLSQVNKVLAGISTSERNKLMKEAVQQQPQTSTKKE------ 281

Query: 279 IDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
                          +W   +++   NYG+M
Sbjct: 282 ---------------NWLVSMLK---NYGQM 294


>gi|301065632|ref|YP_003787655.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|300438039|gb|ADK17805.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 270

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 23/220 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK----------RGFLKCGINTGLVGFAEV 50
           M K     +L ++ L     +  +S   D  K          +  L  G+      F+  
Sbjct: 1   MLKKKLWVLLPIVALSAFVLAACSSSKADSSKTSTVTSELINKNELTIGLEGTYAPFSYR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G  +GF+VD  +AL+  +       +++P         L S++ D++  N   T  R
Sbjct: 61  -KDGKLQGFEVDLGKALAKKVGVKA---KFVPTQWDSLIAGLGSQKFDLVLNNISETPQR 116

Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +     I       I  ++ + G +     GT           A   
Sbjct: 117 KKV--YNFTTPYMYSRYALITRSDETSIKGLNDIKGKTFVEGTGTPNAAL------AKKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             +              + +R D      +A YA   +N 
Sbjct: 169 GANITPSGDFTVSLNLVKENRADGTINATAAWYAYAKSNS 208


>gi|313894870|ref|ZP_07828430.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976551|gb|EFR42006.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 260

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 86/322 (26%), Gaps = 65/322 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M    ++  L        + +         ++ G  + G +     F         + G+
Sbjct: 1   MILSKYIVPLLFGTAVIFAAAGCGGTNEASEQGGKWRVGTDASYAPFGFQDEKTHAYVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
                  + +       +++   LN      ALQ+  +DI   +      R     + F 
Sbjct: 61  ---DIDIIHAIAAAQGHEVEIKNLNFDGLIPALQTGDLDIAISDMTINEERAK--SVDFT 115

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++       ++   L G  + V  G+T          A   +     +  
Sbjct: 116 DSYYKAGLSIVVRADETRYNAFEDLRGQKVGVTIGSTGAEV-----GATIPEVQLREYST 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +     +    DA   D            +     ++P  I++  L  A+ +G+TE  
Sbjct: 171 ISDAFLDLQNGGVDAVVNDTPVDEYYVQGRGKGIA-KVVPAQINQEDLGIAVKKGNTE-- 227

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
                                                 LG   +               R
Sbjct: 228 -------------------------------------LLGQLNAG-------------LR 237

Query: 299 IIRHMGNYGEMFDRNLGNQSEL 320
            I+  G Y E++ +  G +  +
Sbjct: 238 TIKENGTYAEIYRKWFGKEPPV 259


>gi|302023820|ref|ZP_07249031.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis 05HAS68]
          Length = 643

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L  T  ++  +    +K    +    ++    F     +G++ G D++  +A++      
Sbjct: 173 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAEQ---Q 225

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I            A+Q+ Q D +      T  R+      F    Y       +   
Sbjct: 226 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 283

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I+S   L G ++  + GT +   L +        Y    F+    +  +  +   DA 
Sbjct: 284 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KAKYGYTLKAFDEASSMYDSLNSGSIDAL 341

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253
             D      L     +                  A+ +G + E   + +    A+V + +
Sbjct: 342 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 398

Query: 254 LG 255
             
Sbjct: 399 YD 400



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 4/110 (3%)

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
              T  T  R+      F    +         K   ISS   L G ++ V+ GT  +  L
Sbjct: 1   MAGTTITEARKKV--FTFSDPYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFL 58

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +    +   F+  + +  +  A   DA   D + +         
Sbjct: 59  EENKDKYGY--NVKTFDTGDLMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 106


>gi|119025488|ref|YP_909333.1| ABC transporter solute-binding protein [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765072|dbj|BAF39251.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 355

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 15/233 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDP 75
               + +A  + D    G L  G+            +G    G+DVD  +A++  +   P
Sbjct: 102 LAKLAASAKTVKD----GELSVGMELSYAPAEFYAEDGKTPVGYDVDMSKAIAQTLGLKP 157

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              + +         ++ S + D+       T  R     + F           +     
Sbjct: 158 ---KIVSSMFDTIVPSIGS-KYDLGITAMTITEER--LQSVDFVSYYRAGSTWAVQKGNP 211

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S + GA I VQ GT  E       K    + K   + ++R  E   A    + D 
Sbjct: 212 KKLDTSDMCGAKIAVQTGTVQEDEANKIAKGCKADKKAEVMSYKRQAEAATAVATGKADV 271

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +  D     A    +    +   L D+   +    AI +GD +    V     
Sbjct: 272 FYADSP--VAGYAISQTDGQLEALGDVEGVAKQGIAIKKGDQQLDEAVQKAVQ 322


>gi|306828018|ref|ZP_07461284.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|304429799|gb|EFM32842.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 522

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKIAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 110 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 224 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 279


>gi|257465094|ref|ZP_05629465.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus minor 202]
 gi|257450754|gb|EEV24797.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus minor 202]
          Length = 240

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 86/257 (33%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   VS      + F + S  A           +   +      F      GD  GFD
Sbjct: 1   MKKLLLVS-----AMAFAACSAQA---------KEITFAMEPSYPPFETTNEKGDIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +  L       AL+ K++D      D T  R  S  + F  
Sbjct: 47  VDVANAICKEI---QATCSFKGLAFDGLIQALKQKRVDAAISAIDITEKR--SKQVLFSE 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     ++ VQ GTT +  +    K    +Y P  ++ ++
Sbjct: 102 PYYDSSASFIAVKGKADLTTA----KNVGVQNGTTFKEYVIAEAK----QYAPKSYDSLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + L  +       +     +       + L  A+ + +TE  
Sbjct: 154 SSILDLKNGRIDLIFGDTAVLADMLKKEPELAFVGDKVTNKTYFGNGLGIAVNKSNTELA 213

Query: 239 NIVSWTHYAMVTAEELG 255
           N ++    A+    E  
Sbjct: 214 NDLNKGLAAIKANGEYQ 230


>gi|317123399|ref|YP_004097511.1| amino acid ABC transporter substrate-binding protein
           [Intrasporangium calvum DSM 43043]
 gi|315587487|gb|ADU46784.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 304

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 85/285 (29%), Gaps = 45/285 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL------------------------------GDI 30
           M +   ++I  ++ +  T  +  +  L                                I
Sbjct: 1   MRRLPLLAITGMVAVGLTLSACGSDSLEPGSGSPSSPSASTPASTGSADAALAEKVPDKI 60

Query: 31  KKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           K  G +  GI+        +  +G   +G DVD   A+++ +        Y         
Sbjct: 61  KSAGKIIVGIDASYAPNEFIGNDGKTVEGMDVDLFNAVAAKLGVTAE---YQNAGFDTII 117

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASI 148
           L +   + D    +      R+  + +      +  G  ++       +   +   G +I
Sbjct: 118 LGVTGGKYDAGVSSFTINDDRKKEVNM---VSYFNAGTQWVAKTGNPKNVDPNNACGLTI 174

Query: 149 CVQAGTTTEL-----TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            VQ GT  E             A       +V E+ +++ A   + + DA   D      
Sbjct: 175 GVQKGTVQETDDLPLKQKACKDAGKPDITLVVQEKQDQVTADVVSGKTDAMLADSPI--G 232

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L        +   + DI   +P    + +   ++   ++    A+
Sbjct: 233 LYAVKQTNGQLEAVGDIYDAAPYGFVVPKDQADFAQAIADALKAL 277


>gi|154486920|ref|ZP_02028327.1| hypothetical protein BIFADO_00753 [Bifidobacterium adolescentis
           L2-32]
 gi|154084783|gb|EDN83828.1| hypothetical protein BIFADO_00753 [Bifidobacterium adolescentis
           L2-32]
          Length = 326

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 15/233 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDP 75
               + +A  + D    G L  G+            +G    G+DVD  +A++  +   P
Sbjct: 73  LAKLAASAKTVKD----GELSVGMELSYAPAEFYAEDGKTPVGYDVDMSKAIAQTLGLKP 128

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              + +         ++ S + D+       T  R     + F           +     
Sbjct: 129 ---KIVSSMFDTIVPSIGS-KYDLGITAMTITEER--LQSVDFVSYYRAGSTWAVQKGNP 182

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S + GA I VQ GT  E       K    + K   + ++R  E   A    + D 
Sbjct: 183 KKLDTSDMCGAKIAVQTGTVQEDEANKIAKGCKADKKAEVMSYKRQAEAATAVATGKADV 242

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +  D     A    +    +   L D+   +    AI +GD +    V     
Sbjct: 243 FYADSP--VAGYAISQTDGQLEALGDVEGVAKQGIAIKKGDQQLDEAVQKAVQ 293


>gi|84517032|ref|ZP_01004389.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Loktanella vestfoldensis
           SKA53]
 gi|84509150|gb|EAQ05610.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Loktanella vestfoldensis
           SKA53]
          Length = 303

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 35  FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            ++ GI       FA   A G+W G++V+   A+ +A   D       P        AL 
Sbjct: 71  EVRIGIAAEPYPPFASPDAAGNWVGWEVEIIDAVCAAAALD---CVLTPTAWDGIIPALV 127

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-MHKKKGISSVSQLSGASICVQA 152
           S +ID +  +   T   +    + F    Y      +     +  +S   L+G  + VQ 
Sbjct: 128 SGRIDTIMASMSITA--DRMQTIDFSDPYYNTPTVIVGQRNMQMDASPESLAGKVLGVQV 185

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP- 211
            T  +     YF+          ++  +E +    A R DA   D  A+     T     
Sbjct: 186 STIHQSYAQAYFEGA---TELRTYQTQDEANQDLAAGRIDATQADSLAMDDFLATAAGAC 242

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 V   + I  + +   + +GD      ++    A++ 
Sbjct: 243 CEVKGAVAADEAILGAGVGAGVRKGDDALREAINTGIAAIIA 284


>gi|253689070|ref|YP_003018260.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755648|gb|ACT13724.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 277

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 99/246 (40%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +      + + ++  + FS  A    S    IK+ G L+ G+  G   + +  + G+W
Sbjct: 1   MKRSLHQVFMAITLISASFFSQAADTQTSTWQHIKQTGELRIGVAQGEPWYFKNPSTGEW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   +  + L++ +      ++           ALQ+ QID +    D T  R+    +
Sbjct: 61  DGIGYNIGKELANDLGVKLVTVE---TTWGNAIAALQTGQIDTML-VLDPTEERKK--AV 114

Query: 117 AFR-PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHP 173
            F     ++  QG ++     +++   L+     I V  G++ +L L             
Sbjct: 115 DFPEQPFFWYAQGVLIRDGIAVTNWDDLNREDVKIGVTLGSSPDLILTKRLPKA----QL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F  ++E  AA+ A R DA +    AL   +    + +  +ILP  I +   + AI + 
Sbjct: 171 VRFPNMDEGVAAFYAGRVDALSYFHPALALQQAKVGKGN--LILPKPIIEVSTSGAIRKE 228

Query: 234 DTEWYN 239
             + ++
Sbjct: 229 ADQTFH 234


>gi|91787334|ref|YP_548286.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91696559|gb|ABE43388.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 273

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 77/248 (31%), Gaps = 17/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M      + L +      S   +A           LK G       F  +        G 
Sbjct: 24  MKFATLATSLAVTFALSLSGPASAQT--------VLKVGSTPTGSPFTFLDTKTNTIDGV 75

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD   A++         +Q  P+       +L SK+ID++S     T  R+  +  +  
Sbjct: 76  MVDIVNAVAKESG---FGVQIEPMQFSALISSLTSKRIDLISAAMFITPTRQEVVDFSLP 132

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +Y +G   +        S + + G  + VQ GT     L        M     ++E  
Sbjct: 133 IYSYGEGVVVLKQDTVAYQSFADMKGKRVGVQVGTAFVEPLQ----KSGMFSEVKLYETT 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWY 238
            ++     A R DA   D             P+  ++        + +  A  +GDTE  
Sbjct: 189 PDLMRDANAGRIDAGVLDYPIAAFAVAKGQFPNLRMVTSFKPTMVNSIGMATRKGDTELM 248

Query: 239 NIVSWTHY 246
             V+    
Sbjct: 249 GKVNVAVT 256


>gi|29653825|ref|NP_819517.1| arginine ABC transporter periplasmic arginine-binding protein
           [Coxiella burnetii RSA 493]
 gi|161831405|ref|YP_001596412.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Coxiella burnetii RSA 331]
 gi|29541088|gb|AAO90031.1| arginine-binding protein [Coxiella burnetii RSA 493]
 gi|161763272|gb|ABX78914.1| arginine ABC transporter, periplasmic arginine-binding protein
           [Coxiella burnetii RSA 331]
          Length = 269

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 9/199 (4%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     +K         +  +  +G  +GF  D  +A+   +    +             
Sbjct: 37  VFATDTIKFATEATYPPYVYMGPSGQVEGFGADIVKAVCKQM---QAVCTISNQPWDSLI 93

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASI 148
            +L+  + D L    + T  R+    + F    Y +   FI  K   ++ S   L G  I
Sbjct: 94  PSLKLGKFDALFGGMNITTARQK--EVDFTDPYYTNSVSFIADKNTPLTLSKQGLKGKII 151

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GTT +  L D F           +   E+      + R DA  GD   +      N
Sbjct: 152 GVQGGTTFDSYLQDSF---GNSITIQRYPSEEDALMDLTSGRVDAVVGDTPLIKQWLKQN 208

Query: 209 DRPSEHVILPDIISKSPLA 227
            R    +I   +   +   
Sbjct: 209 GRREYVLIGKPVNDPNYFG 227


>gi|325523126|gb|EGD01527.1| Histidine-binding protein [Burkholderia sp. TJI49]
          Length = 248

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 76/218 (34%), Gaps = 11/218 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G++     F     +G   GFD+D    +   +    ++  ++         AL+ +
Sbjct: 16  LRFGVDPSYAPFESKAPSGQLVGFDIDVGNEICRRL---NARCVWVETAFDGIIPALKGR 72

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D +      T  RE  L  +             +  +    +V+ L G  + V  G+T
Sbjct: 73  KFDAILSALSVTPQRETQLAFSTSLFNTPSRL-VGLRGRDIKPTVASLRGKRVGVAQGST 131

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E     Y+    +    + +   E ++   RA R D    D+ A     L   + + +V
Sbjct: 132 QETYARTYWAPAGI--EVVSYANQELVNNDLRAGRLDVTLTDMVAASEGFLKTPQGAGYV 189

Query: 216 ILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAM 248
            L + +         +A  + + D    + +     AM
Sbjct: 190 FLGEPVVDEKTLGKGVAIGLRKDDGALRDRIDGAIAAM 227


>gi|313108080|ref|ZP_07794239.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           39016]
 gi|310880741|gb|EFQ39335.1| periplasmic histidine-binding protein HisJ [Pseudomonas aeruginosa
           39016]
          Length = 261

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+ G++         + +G   GF ++   AL + +    ++ +++  N      AL 
Sbjct: 26  KVLRLGVDPTYPPLEYKQPDGHLAGFGIEIGEALCAEL---RARCEWVESNWDGIIPALL 82

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152
           S++ID +  +   T  R   +   F           ++ +    +     L G  + V  
Sbjct: 83  SRKIDAIVSSMTITPKRAQHIA--FTDRVSNAPSRLVVRRGSALLPDAESLRGKRVGVGQ 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E      + A       + ++  +++ A     R DA            L      
Sbjct: 141 GSNQEAYAKAEWAAKG--LRVVSYQNQDQVYADLVMGRLDASLQGAVQASYGFLDKPVGK 198

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +  +   ++             + + D      ++    A + A
Sbjct: 199 DFELAGAVLDDPRYFGVGDGIGLRKEDVALREDLNKAL-ATIRA 241


>gi|238758230|ref|ZP_04619409.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia aldovae ATCC 35236]
 gi|238703560|gb|EEP96098.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia aldovae ATCC 35236]
          Length = 254

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 17/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 1   MKK---LSLGIMVLALISSQQVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGKLIGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  ++L+  +     K+ ++  +       L + + DI       T  R     L+   
Sbjct: 58  VDMAKSLADNL---NLKVNFVMTSWPTLSEDLAADKFDIAMGGVTATPGRAAQFVLSNAV 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +           + +   ++  +   S+ V            +  A+  +   I  +   
Sbjct: 115 VKNGKIALANCQQSQKFPTLEAIDRKSVKVIVNPGGTN--QSFVDANIKQAQIIRTKDNV 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQGDT 235
                 R    D    D   +      +  P         +LP   S       + + + 
Sbjct: 173 ANLQGVRDKSADIMFTD--LIEGDYYQSKEPGVFCVATAEVLPGTGSYKVY--MMAKDNK 228

Query: 236 EWYNIVSWTHYAMVTA 251
              N V+        +
Sbjct: 229 HLLNEVNQWLSGQTKS 244


>gi|299822330|ref|ZP_07054216.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299815859|gb|EFI83097.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 496

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 82/258 (31%), Gaps = 23/258 (8%)

Query: 1   MYKDF------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K        F +++ + ++   S   +A+      K    +   +T    F      G
Sbjct: 17  MKKCLRILFPVFAALILIFMISGVSKPVHAA------KTDTYEIATDTTFAPFEFESKKG 70

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ G D+D  +A++        K +  PL       AL++ Q+D +      T  RE   
Sbjct: 71  EYIGIDMDLLKAIAKD---QNFKYKIKPLGFNAAVQALEANQVDAVIAGMSITPDREK-- 125

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F    +  G    + K +  + S   L G  + V+ GT  E             +  
Sbjct: 126 KFDFSKPYFESGVVMAVDKDEKNVKSYKDLKGKKVAVKTGT--EGYAFADKIKDKYGFKI 183

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F+    +    +     A   D   L          +   I+ D         A+ +G
Sbjct: 184 VTFDESSPMYDDVKTGNSAAAFDDFPVLAYGVQQ---GNGLKIVTDKEKGGEYGFAVNKG 240

Query: 234 DTEWYNIVSWTHYAMVTA 251
             +       T  A + A
Sbjct: 241 KNKELLDKFNTGLANLKA 258


>gi|254693677|ref|ZP_05155505.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella
           abortus bv. 3 str. Tulya]
          Length = 177

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 7/151 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   +     +  + A+ + + ++   L  G       F  +K +G   GFD
Sbjct: 1   MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGACPPFNFIKPDGTLSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA    +    +K +++  +      ALQS + D    +   T  R+    + F  
Sbjct: 61  VDIARARCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
             Y    G    K   I   +   L+G +I 
Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 146


>gi|254466592|ref|ZP_05080003.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Rhodobacterales bacterium
           Y4I]
 gi|206687500|gb|EDZ47982.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Rhodobacterales bacterium
           Y4I]
          Length = 254

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 80/218 (36%), Gaps = 11/218 (5%)

Query: 36  LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +K GI       FA + ++G+W G++V+   A+ +A   D       P+       +L  
Sbjct: 26  VKIGIAAEPYPPFASLDSSGNWVGWEVEVIGAVCAAAELD---CVITPVAWDGIIPSLTG 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           +QID +  +   T  R+ +  + F    Y      +  K   I+     L+G  + +QA 
Sbjct: 83  QQIDAIMASMSITEERQKT--IDFSDPYYNTPAVIVADKSMDIAPTPDSLAGKILGIQAS 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT +     +F          V++  +E +    A R DA   D  A+     ++     
Sbjct: 141 TTHQAYAQAHF----TGAELKVYQTQDEANQDLVAGRIDATQADSIAMADFVNSDTGSCC 196

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            +        + L   +  G  +  + +       + A
Sbjct: 197 EIKGAVADDPAILGLGVGAGVRKGDDALREALNKGIAA 234


>gi|320154862|ref|YP_004187241.1| cyclohexadienyl dehydratase [Vibrio vulnificus MO6-24/O]
 gi|319930174|gb|ADV85038.1| cyclohexadienyl dehydratase [Vibrio vulnificus MO6-24/O]
          Length = 258

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 77/245 (31%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K +    L L+     + +   S L +I   G L+ G              N  ++GF
Sbjct: 1   MKKTWLALGLGLLAASTLANAQ--SRLNEILDNGVLRVGTTGDWNPMTMKDPANNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++Y+  + K     + + + D ++ +   ++ R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEYVATDWKTLVNGITADKYD-ITGSASLSMSRAKVAGYSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                             S  S        +    GT  E  +  +F +       IV E
Sbjct: 115 YFYLAFVPVVQKKDLGKYSDWSDFDKADVKVAATLGTVQEKMVKAFFPSAQH----IVIE 170

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D           L     +    V + +    +P+A  + Q D  W
Sbjct: 171 APARDFQELLAKRADVSVTSNVEAATLVEKFQQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229

Query: 238 YNIVS 242
            N V+
Sbjct: 230 INYVN 234


>gi|302671183|ref|YP_003831143.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio
           proteoclasticus B316]
 gi|302395656|gb|ADL34561.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio
           proteoclasticus B316]
          Length = 296

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 15/237 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
                  +   +   IK+RG +   +      +     +G+  GFD +  + ++  +  D
Sbjct: 52  ATAAPKESTNDLYATIKERGKIIIAMEGQWAPWTYHDESGELVGFDTEVGQEIAKRLGVD 111

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-K 133
                ++       F  L   + D++    + T LR+      F     +     ++   
Sbjct: 112 AE---FVEGEWDGLFAGLDGGRYDMIINGVEITDLRKE--KYDFTEPYAYIRTALVVKDD 166

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I+S   L G       G+T     AD      +       + + E      + R DA
Sbjct: 167 NSDITSFDDLKGKKTSNSLGSTYADLAAD------LGAEVQNVDTLSETIDMVLSGRVDA 220

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 + Y     +      ++     +      +I     E    +     A + 
Sbjct: 221 TLNAEVSFYDYLGEHPDAPIKIVALTDDASE---VSIPLRKGEETASLREAVNAAIA 274


>gi|164687609|ref|ZP_02211637.1| hypothetical protein CLOBAR_01250 [Clostridium bartlettii DSM
           16795]
 gi|164603383|gb|EDQ96848.1| hypothetical protein CLOBAR_01250 [Clostridium bartlettii DSM
           16795]
          Length = 323

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 85/281 (30%), Gaps = 36/281 (12%)

Query: 2   YKDFFVSILCLIILFFTSFST-----------------NASILGDIKKRGFLKCGINTGL 44
            K     +  ++++     S+                     L  IK  G LK G +   
Sbjct: 41  KKLLATGLAAIMVMGLVGCSSSKGSSSSASSDASSSAAKTEKLQQIKDAGVLKVGTSAEY 100

Query: 45  VGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
             +     V       GFD    + ++  +      ++Y  ++      ALQ+ ++DI+ 
Sbjct: 101 SPYEFHKVVDGEDKIVGFDDFLVQEIAKDMGVK---VEYEDMDFDGLLGALQADKVDIVL 157

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELT 159
                   R+    + F  I Y +    I+   K+  I     L    + VQ GTT    
Sbjct: 158 AGMTPDEKRKK--SVDFSDIYYTNSNVCIVAKGKEDTIKKSEDLKDLKVGVQKGTTQADY 215

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           + +              +++ ++    +  + D      +         D  +       
Sbjct: 216 VTNTLG----ISDATQLKKIPDLMLELQNGKIDVIVTGKAVAEINVKKYDNIAIGNTTVG 271

Query: 220 IISKSPLAPAIIQ-----GDTEWYNIVSWTHYAMVTAEELG 255
                  A AI +      +T +   V+ T   +  + ++ 
Sbjct: 272 DEVAETSAAAIKKSGNGVDNTSFVKSVNDTIKRLQDSGDMD 312


>gi|125973970|ref|YP_001037880.1| extracellular solute-binding protein [Clostridium thermocellum ATCC
           27405]
 gi|256005806|ref|ZP_05430758.1| extracellular solute-binding protein family 3 [Clostridium
           thermocellum DSM 2360]
 gi|281418130|ref|ZP_06249150.1| extracellular solute-binding protein family 3 [Clostridium
           thermocellum JW20]
 gi|125714195|gb|ABN52687.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Clostridium thermocellum ATCC 27405]
 gi|255990252|gb|EEU00382.1| extracellular solute-binding protein family 3 [Clostridium
           thermocellum DSM 2360]
 gi|281409532|gb|EFB39790.1| extracellular solute-binding protein family 3 [Clostridium
           thermocellum JW20]
 gi|316939832|gb|ADU73866.1| extracellular solute-binding protein family 3 [Clostridium
           thermocellum DSM 1313]
          Length = 269

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 80/239 (33%), Gaps = 11/239 (4%)

Query: 6   FVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              IL L       T  S + S L  +K +G L  G  T          NG + GFD + 
Sbjct: 16  LTMILALTACGAKETGKSQDESDLNYVKSKGKLIIGY-TNYAPMNYTDENGVFTGFDTEL 74

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
                  +  +P    ++ +N   + + L +K ID +         R+  + +       
Sbjct: 75  AILTCEKLGVEPE---FVEINWDTKEVELNAKSIDCIWNGLTIDDDRKAKMEI--TQPYV 129

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            + Q  ++ +    +    L G ++  +  +  E T+      +  K + +      +  
Sbjct: 130 KNAQVVLVKEGTEYNGTESLIGKTVVAEQSSAGEKTI--MADENLKKANYVPKTLQTDCL 187

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              ++   DA   D++             E +++ D +++     A  +G      +  
Sbjct: 188 MELKSGTADAAVLDLTL-AKTMTGEGTSYEDIVIVDYLAEENYGVAFRKGSDICAEVNK 245


>gi|57167816|ref|ZP_00366956.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Campylobacter coli RM2228]
 gi|57020938|gb|EAL57602.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Campylobacter coli RM2228]
          Length = 256

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +GD    
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALK 216

Query: 239 NIVSW 243
           + +  
Sbjct: 217 DKLDN 221


>gi|227112255|ref|ZP_03825911.1| putative extracellular solute-binding protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 277

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 98/246 (39%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +      + + ++  + FS  A    S    IK+ G L+ G+  G   + +  + G+W
Sbjct: 1   MKRSLHQVFMAISLISASFFSQAADTQTSTWQHIKQTGELRIGVAQGEPWYFKNPSTGEW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   +  + L++ +      ++           ALQ+ QID +    D T  R+    +
Sbjct: 61  DGIGYNIGKELANDLGVKLVTVE---TTWGNAIAALQTGQIDTML-VLDPTEERKK--AV 114

Query: 117 AFR-PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHP 173
            F     ++  QG ++     +++   L+     I V  G++ +L L             
Sbjct: 115 DFPEQPFFWYAQGVLIRDGITVTNWDDLNREDVKIGVTLGSSPDLILTKRLPKA----QL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F  ++E  AA+ A R DA +    AL   +    + +  +ILP  I +   + A  + 
Sbjct: 171 VRFPNMDEGVAAFYAGRVDALSYFHPALALQQAKVGKGN--LILPKPIIEVSTSGATRKE 228

Query: 234 DTEWYN 239
             + ++
Sbjct: 229 ADQTFH 234


>gi|150017253|ref|YP_001309507.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903718|gb|ABR34551.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 261

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 79/241 (32%), Gaps = 14/241 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDW 56
           M K   V I+   ++     +   S   D  K G          +     F+  + +G +
Sbjct: 1   MNKKSLVGIVLASVMTVGIMAGCGSSKNDSAKSGDGNKKYVIACDAKYAPFSF-EEDGKY 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KG DV+   A++     +  +    P++       L S Q+D        T  R+    L
Sbjct: 60  KGIDVELLDAIAKE---EKFEYDLKPMDFNGIIPGLTSNQLDGAIAGMSITDERK--QSL 114

Query: 117 AFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F    +  G   +++K    I  V  + G +  ++ GT       D    + +K +   
Sbjct: 115 DFSDGYFVSGLSLVVNKDNADIKGVDDIKGKNASLKKGTAGAKFAEDNESKYGLKLN--Y 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+    +  A     CD    D   +      +      +    + +      A+ +G+ 
Sbjct: 173 FDDSPSMFQAVENKNCDFLLEDYPVIAYKIKVDPDSKLKIAGDKLTNVD-YGFAVKKGEN 231

Query: 236 E 236
            
Sbjct: 232 A 232


>gi|331266285|ref|YP_004325915.1| polar amino acid ABC transporter, amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
 gi|326682957|emb|CBZ00574.1| polar amino acid ABC transporter, amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
          Length = 721

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +F    +          K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKILACLLILFPIFSLGMA----------KADTVKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQSGQADAIMAGMTKTKERE--NVFTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+   +LSG ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKANKITKYEELSGKTVGVKNGTAAQRFLESIKDKYGFS--IKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   +A   D   +         
Sbjct: 164 LMNNSLSAGAVNAIMDDKPVIEYAINQGQD 193



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 10/190 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               ++    F    ++  + G D+D  +A++     +   I+           A+Q+ Q
Sbjct: 270 IIASDSSFAPFVFQNSSNQYTGIDMDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQ 326

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+ +    F    Y       + +   I+S   L   ++ V+ GT +
Sbjct: 327 ADGIIAGMSVTDARKET--FDFSESYYTANTILGVKESSTIASYEDLKDKTVGVKNGTAS 384

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSE 213
           +  L +    +  K     F     +  +      DA   D        +       P  
Sbjct: 385 QTFLTENQSKYGYK--IKTFADGASMYDSLNTGSIDAVMDDEPVLKYSISQGQKLKTPIA 442

Query: 214 HVILPDIISK 223
              + +    
Sbjct: 443 GTPIGETAFA 452


>gi|306829599|ref|ZP_07462789.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus mitis
           ATCC 6249]
 gi|304428685|gb|EFM31775.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus mitis
           ATCC 6249]
          Length = 721

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +F    +          K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKILACLLILFPIFSLGMA----------KADTVKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQSGQADAIMAGMTKTKERE--NVFTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+   +LSG ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKANKITKYEELSGKTVGVKNGTAAQRFLESIKDKYGFS--IKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   +A   D   +         
Sbjct: 164 LMNNSLSAGAVNAIMDDKPVIEYAINQGQD 193



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 10/190 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               ++    F    ++  + G D+D  +A++     +   I+           A+Q+ Q
Sbjct: 270 IIASDSSFAPFVFQNSSNQYTGIDMDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQ 326

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+ +    F    Y       + +   I+S   L   ++ V+ GT +
Sbjct: 327 ADGIIAGMSVTDARKET--FDFSESYYTANTILGVKESSTIASYEDLKDKTVGVKNGTAS 384

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSE 213
           +  L +    +  K     F     +  +      DA   D        +       P  
Sbjct: 385 QTFLTENQSKYGYK--IKTFADGASMYDSLNTGSIDAVMDDEPVLKYSISQGQKLKTPIA 442

Query: 214 HVILPDIISK 223
              + +    
Sbjct: 443 GTPIGETAFA 452


>gi|293365541|ref|ZP_06612250.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307703498|ref|ZP_07640440.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|291315909|gb|EFE56353.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307622905|gb|EFO01900.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 721

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +F    +          K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKILACLLILFPIFSLGMA----------KADTVKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQSGQADAIMAGMTKTKERE--NVFTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+   +LSG ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKANKITKYEELSGKTVGVKNGTAAQRFLESIKDKYGFS--IKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   +A   D   +         
Sbjct: 164 LMNNSLSAGAVNAIMDDKPVIEYAINQGQD 193



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 10/190 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               ++    F    ++  + G D+D  +A++     +   I+           A+Q+ Q
Sbjct: 270 IIASDSSFAPFVFQNSSNQYTGIDMDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQ 326

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+ +    F    Y       + +   I+S   L   ++ V+ GT +
Sbjct: 327 ADGIIAGMSVTDARKET--FDFSESYYTANTILGVKESSTIASYEDLKDKTVGVKNGTAS 384

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSE 213
           +  L +    +  K     F     +  +      DA   D        +       P  
Sbjct: 385 QTFLTENQSKYGYK--IKTFADGASMYDSLNTGSIDAVMDDEPVLKYSISQGQKLKTPIA 442

Query: 214 HVILPDIISK 223
              + +    
Sbjct: 443 GTPIGETAFA 452


>gi|170735824|ref|YP_001777084.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169818012|gb|ACA92594.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 250

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 10/202 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G +T  + F   + +  + GFD+D    ++             P++      A
Sbjct: 24  DTKTLVVGTDTSFMPFEFKQGD-KYVGFDLDLWAEIAKDQGWKY---TIQPMDFAGLIPA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ++ ID+          R+ ++  +  P         +      I S+  L+G  I  +
Sbjct: 80  LQTQNIDVALSGMTIKEERKKAIDFS-APYYDSGLAAMVQAGNTSIKSIDDLNGKVIAAK 138

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT T     D+ KAH        F  +++   A  A R DA     +      + N+  
Sbjct: 139 TGTATI----DWIKAHLKPKEVRQFPNIDQAYLALEAGRVDA-AMHDTPNVLFFVNNEGK 193

Query: 212 SEHVILPDIISKSPLAPAIIQG 233
            +  +    +S         +G
Sbjct: 194 GKVQVAGQPVSGDKYGIGFPKG 215


>gi|315281521|ref|ZP_07870132.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria marthii FSL S4-120]
 gi|313614833|gb|EFR88366.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria marthii FSL S4-120]
          Length = 480

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 14/281 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L + I    +F    + L           G +T    F   +  G+  G D
Sbjct: 1   MKK-FSRFLLMMAIACVAAFIFTGNGLNAKAAEETYLIGTDTTFAPFEF-EKGGEHVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++        K +   +       AL++ Q+D +      T  R+      F  
Sbjct: 59  MDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKFDFSD 113

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    I+     I +   L G  + V+ GT            +      +VF+  
Sbjct: 114 PYFDSGVVMGILKDNDEIKTYEDLKGKKVAVKTGTEGYAFAEKIKAKYGFD--IVVFDDS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++    +     A   D   L     T    +   I+ D    +    A+ +G  +   
Sbjct: 172 AQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTDKEKGNSYGFAVNKGKNQELL 228

Query: 240 IVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGI 279
                    + A  E     +          N   + F+GI
Sbjct: 229 AKFNAGLVNIKASGEYDEILETYLGKDAIKENTTEKGFMGI 269


>gi|299069939|emb|CBJ41223.1| putative amino-acid-binding ABC transporter protein [Ralstonia
           solanacearum CMR15]
          Length = 283

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 14/234 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+       + +IKKRG L  G       F  V  NG   GF  D    ++  +     +
Sbjct: 24  TTAFAEGGSIAEIKKRGKLVVGTEAAYEPFEFV-ENGQVVGFGRDILVIMADKLGVKLEQ 82

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           +    L  +     L S + D ++ +   T  R       F           ++      
Sbjct: 83  MN---LPFQGLLPGLLSHKFDFVATSVSITPERARRFA--FSQPIGTVRPVLMVRADDTS 137

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-----HPIVFERVEEIDAAYRAHRC 191
           I+    L G  +  Q G++++     + K    +         +F+   +   A      
Sbjct: 138 ITRDLDLVGKVLGTQMGSSSQPAAEQFEKTLKEQRGQGYADTKLFQAYPDAALALSNKTV 197

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D     I +  A      +P    I+ ++     LA      D +    ++ T 
Sbjct: 198 D--VAFIPSNVAAIQMRKQPGAFKIVGEVGQPRLLAWVANPQDLDIRKFINDTL 249


>gi|326331082|ref|ZP_08197380.1| putative extracellular solute-binding protein, family 3
           [Nocardioidaceae bacterium Broad-1]
 gi|325951123|gb|EGD43165.1| putative extracellular solute-binding protein, family 3
           [Nocardioidaceae bacterium Broad-1]
          Length = 273

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 25/265 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +   V    +++L   +FS                 +     L+ G+++    +    
Sbjct: 1   MNQIKLVVAGAVVLLGAIAFSGYFSQSTPTATDKASAAVGSSNTLRIGVDSTEPVY-FKS 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL--L 109
            +G  KGFD +  R+++  +  +P    ++ ++  E F AL++ +ID++      T    
Sbjct: 60  EDGSAKGFDYEMARSVAEGMGLEPE---FVAMDFNELFPALRAGKIDMIGAQVTNTSVLE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           RE      F    +     F+  +   + +   + G  I V  G   E  L D       
Sbjct: 117 RE----FDFSAPYFSTYVAFLTPEGSTVRTRRDVDGKRIAVVDGAIQESYLRD----KYH 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +    V            DA         ++  +     E  I+  + +  P+   
Sbjct: 169 DVQIVKAPNVGAAVDLIERGEADALFHGAPYAQSIIKSAPIVLEEPIVYQVDNA-PIGFV 227

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254
           I  G  +    +      MV + E 
Sbjct: 228 IRSG-DQRKAQIDEVLKDMVLSGEW 251


>gi|116617557|ref|YP_817928.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096404|gb|ABJ61555.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 480

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K + +     +     +  T    +   K    +    +     F    +N  + G D
Sbjct: 1   MKKIWIILTTLAVSFIAMASVT---TVSAAKPNYIIT--TDATYPPFDFQDSNNQYTGID 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  + ++     +       P++      ++ S Q D +      T  R+      F  
Sbjct: 56  QEILKTIAKR---EGFTYTLKPMSFNAATQSVTSGQADGIIAGMSITDERKEV--FDFGT 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G  + + K   I S+S L G ++ ++ GT          K +  K     F   +
Sbjct: 111 PYYKSGIAWAVKKGSNIKSLSDLKGKTVALKTGTAGADYALSIQKQYGFK--VTYFNDSD 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWY 238
            +          A  GD+     L+ +    ++  ++             A+ +G  +  
Sbjct: 169 TLYNDVVNDNAQATFGDLPV---LQYSIKNGTKLKVMNAKSPYESGWYGFAVKKGQNKQL 225

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
                  YA +                  T +  ++++LG   S   G+ 
Sbjct: 226 LASFNKGYAAI--------------KKDGTYDKIIKKYLGAPASDFTGKK 261


>gi|331008688|gb|EGH88744.1| putative ABC transporter exported solute-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 279

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 82/239 (34%), Gaps = 10/239 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69
            L ++     +   + L  I +R  +  G+      F  +    GD +G++V+  + L+ 
Sbjct: 12  ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +  D   +    + A  R   LQ  ++D+L  N  +T  R   L     P     G   
Sbjct: 72  RLSVDLETVS---VLAPNRVQFLQQGKVDLLIANMQFTEERAQILDYVPTP-YEEVGGAA 127

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K  GIS      G  +CV  G+     L + + A         F    E   + R +
Sbjct: 128 LVRKGSGISMWEDFKGKPVCVSQGSNFIKPLQELYGA-----QIKAFRSQSESLLSLRGN 182

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            C A       +  L    +     + +P  +  S     + +G+ +    +       
Sbjct: 183 GCVAAVHVSPTMRTLLSEKEWSGYEIPVPTDLIPSSSVIWVRKGEHDIQARLDAIVRDW 241


>gi|257488014|ref|ZP_05642055.1| putative ABC transport system, exported solute-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 267

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 82/239 (34%), Gaps = 10/239 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69
            L ++     +   + L  I +R  +  G+      F  +    GD +G++V+  + L+ 
Sbjct: 12  ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +  D   +    + A  R   LQ  ++D+L  N  +T  R   L     P     G   
Sbjct: 72  RLSVDLETVS---VLAPNRVQFLQQGKVDLLIANMQFTEERAQILDYVPTP-YEEVGGAA 127

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K  GIS      G  +CV  G+     L + + A         F    E   + R +
Sbjct: 128 LVRKGSGISMWEDFKGKPVCVSQGSNFIKPLQELYGA-----QIKAFRSQSESLLSLRGN 182

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            C A       +  L    +     + +P  +  S     + +G+ +    +       
Sbjct: 183 GCVAAVHVSPTMRTLLSEKEWSGYEIPVPTDLIPSSSVIWVRKGEHDIQARLDAIVRDW 241


>gi|289805261|ref|ZP_06535890.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 161

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 18/178 (10%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L  L   + S +A           L  G +     +  V A+    GFD+D   A+  
Sbjct: 1   MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
            +    ++  +   +       L+ K+ D +    D T  RE    ++F    Y      
Sbjct: 52  EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           ++ +K    + + L G  + ++ GTT +  L D          P+ ++          
Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLE 160


>gi|21909739|ref|NP_664007.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS315]
 gi|28895121|ref|NP_801471.1| glutamine-binding periplasmic protein [Streptococcus pyogenes
           SSI-1]
 gi|21903923|gb|AAM78810.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS315]
 gi|28810366|dbj|BAC63304.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes SSI-1]
          Length = 522

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKIAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 110 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 224 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 279


>gi|53720999|ref|YP_109985.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei K96243]
 gi|76811465|ref|YP_331588.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1710b]
 gi|126440444|ref|YP_001060957.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 668]
 gi|126454390|ref|YP_001068256.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1106a]
 gi|134281534|ref|ZP_01768242.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 305]
 gi|167721815|ref|ZP_02405051.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei DM98]
 gi|167740787|ref|ZP_02413561.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 14]
 gi|167818002|ref|ZP_02449682.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 91]
 gi|167847883|ref|ZP_02473391.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei B7210]
 gi|167896442|ref|ZP_02483844.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 7894]
 gi|167913121|ref|ZP_02500212.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 112]
 gi|167921059|ref|ZP_02508150.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei BCC215]
 gi|217424034|ref|ZP_03455534.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 576]
 gi|237814340|ref|YP_002898791.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei MSHR346]
 gi|242314583|ref|ZP_04813599.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1106b]
 gi|254186484|ref|ZP_04893001.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194582|ref|ZP_04901013.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei S13]
 gi|254260961|ref|ZP_04952015.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1710a]
 gi|254298708|ref|ZP_04966159.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 406e]
 gi|52211413|emb|CAH37404.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei K96243]
 gi|76580918|gb|ABA50393.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1710b]
 gi|126219937|gb|ABN83443.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 668]
 gi|126228032|gb|ABN91572.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1106a]
 gi|134247201|gb|EBA47287.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 305]
 gi|157808513|gb|EDO85683.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 406e]
 gi|157934169|gb|EDO89839.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei Pasteur
           52237]
 gi|169651332|gb|EDS84025.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei S13]
 gi|217393097|gb|EEC33119.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 576]
 gi|237504256|gb|ACQ96574.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei MSHR346]
 gi|242137822|gb|EES24224.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1106b]
 gi|254219650|gb|EET09034.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1710a]
          Length = 261

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 78/266 (29%), Gaps = 18/266 (6%)

Query: 1   MYKDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +       C  +            AS L D+  RG L+         +   + +G ++
Sbjct: 3   MNQTLLALACCAGLAHAQTAPQPGAPASRLDDVLARGTLRVCTTGDYKPYTYRREDGAFE 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D   +L+ ++    + ++       + F+A    + DI       TL R+    + 
Sbjct: 63  GIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQK--RVF 116

Query: 118 FRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           F      DG+  I+           +        + V  G T E     +F         
Sbjct: 117 FTQPYVSDGKTPIVRCADAERYQTIAQIDQPQTRVIVNPGGTNERFAKQHFTRAK----L 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            VF     I     A   D    D S    L+   +     V           A  + +G
Sbjct: 173 TVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRG 231

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D  +   V    +      EL     
Sbjct: 232 DVVFQQYVDQWLHLARETGELRAISD 257


>gi|296272081|ref|YP_003654712.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096256|gb|ADG92206.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 260

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 85/260 (32%), Gaps = 17/260 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L  L F   S              +K G +     F   K +   KGF+
Sbjct: 1   MKKLTLI-FLTLSTLLFIGCSDEKKGADTTANEKVIKVGTSGAYFPFTFYKDD-KLKGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +    +KI++        F  L++ +ID +S     T  R       F  
Sbjct: 59  IDVWNAIGKKL---NAKIEFKTAKFSGLFGMLETGKIDTISNQVTMTDKR--IEKYDFTT 113

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   I++K    I S   L G  + V  GT     +    K + ++         
Sbjct: 114 PYVYDGAQIIINKDNNDIKSFDDLKGKKVGVTLGTNYAQIVRSLDKNNEIELVTYEGNGF 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+     + +R  A+  D ++   L      P + V  P  I  +       + +     
Sbjct: 174 EQ---DVKLNRIAAFVQDRTSAVELIKKTKLPLKIVGEPLEILTNSFPFVKNEKNKTLIK 230

Query: 240 IVSWTHYAMVTAEELGITQK 259
            V+         EEL     
Sbjct: 231 EVNEAI------EELRKDGT 244


>gi|300814287|ref|ZP_07094559.1| bacterial extracellular solute-binding protein, family 3
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511554|gb|EFK38782.1| bacterial extracellular solute-binding protein, family 3
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 296

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 84/277 (30%), Gaps = 43/277 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------------------------TNASILGDIKKR 33
           M K F V  L  ++    + S                            + S L DIK +
Sbjct: 2   MKKVFMVISLLALVFTLVACSGSQENANKAINEAAKNAKQENTEANKEASDSSLEDIKTK 61

Query: 34  GFLKCGINTGLVGF---AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G +  G +         +       +KG D++  +A++ ++      ++   +  +    
Sbjct: 62  GKIVLGTSADFPPLEWVSYKDGGESYKGLDIEIAKAIADSLGVK---LEIKNMAFEGLIT 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASI 148
           +L +  +D++    + +  R+    + F    Y  GQ  ++  +      ++  L G  I
Sbjct: 119 SLNAGDVDMIIAGMEASDERKK--EVDFSAPYYSGGQSLVVRAEDKDKFKTLDDLKGHKI 176

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             Q  T     +   F           ++    +    +    DA               
Sbjct: 177 GTQLNT-----VQQTFAEEKFGSDVQGYDLNNVLIEQLKNKSVDALFLSE-LPAKEFAYL 230

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           ++    +       +   + AI +G+    + V+   
Sbjct: 231 NKDLAFIEDIGAPKEKGFSVAIKKGNQTLLDEVTKIV 267


>gi|331267190|ref|YP_004326820.1| ABC transporter substrate-binding lipoprotein [Streptococcus oralis
           Uo5]
 gi|326683862|emb|CBZ01480.1| ABC transporter substrate-binding lipoprotein [Streptococcus oralis
           Uo5]
          Length = 280

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 82/258 (31%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + S+  L ++     +  +               +  +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGDKKDTATSEAASGKKEIIVATNASPKPFNY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   I++        F  L S +  +   N  +T  R  
Sbjct: 60  NGELTGYEIEVVRAIFKD--SDKYDIKFEKTEWSGVFAGLDSDRYQMAVNNISYTKERAE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +   T  +    ++ K    I S+  + G S  V  GTT+   L DY K H    
Sbjct: 118 --KYLYAAPTAKNPNVLVVKKDDDSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHADNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I +     + D    D        + N       ++     + P    
Sbjct: 176 TVLNYTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|315221701|ref|ZP_07863617.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315189188|gb|EFU22887.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 727

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 68/210 (32%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L+ LF    S +A           +K   +T    F    ++  +KG D
Sbjct: 1   MKKKIIAFLLALLPLFAV-TSIHADT---------IKVVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     D   I            A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAELKGWD---INMTFPGFDAAVNAVQSGQADAIMAGMTKTKDREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   ISS SQL G ++ V+ GT ++  L      +  K+    F+  +
Sbjct: 106 TYYDTKVVIATTKANTISSYSQLKGKTVGVKNGTASQRFLEKI--KNKYKFTIKTFDTTD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               +  +   DA   D   +         
Sbjct: 164 LTYNSLNSGSIDAMMDDQPVIEYAIKQGQN 193



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 13/193 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
                 ++    F    +N  + G D+D  +A++         I+           A+QS
Sbjct: 272 TYTIASDSSFAPFVFQDSNNKYTGIDMDLIKAIAKD---QGFTIEITNPGFDAALNAVQS 328

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  R+ +    F    Y       + +   I+S   L G ++ V+ GT
Sbjct: 329 GQADGMIAGMSVTDARKET--FDFSEPYYTANAILAVKESSTIASYKDLKGKTVGVKNGT 386

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            ++  L +    +   Y    F     +  +  +   DA   D   +        +    
Sbjct: 387 ASQTFLTEN--QNKYGYKIKTFADASSMYDSLNSGSVDAVMDDEPVVKYSISQGQK---- 440

Query: 215 VILPDIISKSPLA 227
             L   I  +P+ 
Sbjct: 441 --LKTPIKGTPIG 451


>gi|19745409|ref|NP_606545.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS8232]
 gi|19747518|gb|AAL97044.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS8232]
          Length = 522

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKIAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 110 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 224 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 279


>gi|187921718|ref|YP_001890750.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187720156|gb|ACD21379.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 263

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 10/218 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI+           +G +KGFDVD    +   I    ++ Q++ L       ALQ+
Sbjct: 33  TLRLGIDPSYPPMDAKAPDGSFKGFDVDLGNEICKRI---HARCQWVELEFSGMIPALQA 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           ++ID +  +   T  RE    + F    +      I  +   ++   + L+G  I VQ+G
Sbjct: 90  RKIDAILSSMAITEKRE--QQILFSSKLFQFKSRLIARQGSALAGGTNALAGKQIGVQSG 147

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E      +       H + ++  +E+ A  +  R D             L       
Sbjct: 148 TQFEGYALKNWAPLG--AHVVAYKSQDEVFADLQNGRLDGALLGSVEADIGFLRTPAGKG 205

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
              + + +S       I     E    V  +  A + +
Sbjct: 206 FAFVGEPLSMGDRGVGIGLRKDE--TAVQASINAAIAS 241


>gi|295107394|emb|CBL04937.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 278

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 81/238 (34%), Gaps = 30/238 (12%)

Query: 32  KRGF-LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
             G  L+ G+ + +VGF  +    G + G ++D    +++ +      ++++ +    R 
Sbjct: 38  ASGKALRVGVRSDVVGFGYLNEGTGKYYGLEIDIAEEMAARMG--YGSVEFVTVTPDTRK 95

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L + ++D +         RE      F P  Y D    ++ K   +SS+  L G +  
Sbjct: 96  DMLVNGEVDCMVACYSIAESREK--NFDFSPSYYTDASIVMVEKSSLVSSIDDLKGLTFG 153

Query: 150 VQAGTTTELTLA------------------DYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
             AGT T   LA                  D+       +  +     +++  A      
Sbjct: 154 TMAGTNTAPQLALKLTESGFTSGEALEQTEDHSMTRFDNFRLVQMASYQDLSRALEEGSI 213

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           DA   D +  +          +  +L  +I       A  +G +     VS     M+
Sbjct: 214 DAACMDGAIAHTYLNA-----DRSMLDYVIDTQEYGVATQKG-SALSKPVSDAIQGML 265


>gi|258545837|ref|ZP_05706071.1| histidine ABC superfamily ATP binding cassette transporter,
           histidine-binding protein HisJ [Cardiobacterium hominis
           ATCC 15826]
 gi|258518853|gb|EEV87712.1| histidine ABC superfamily ATP binding cassette transporter,
           histidine-binding protein HisJ [Cardiobacterium hominis
           ATCC 15826]
          Length = 255

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 81/228 (35%), Gaps = 13/228 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +     F+E+ ++G   GFD+D  +AL   +  +    ++  L+ +    AL++ 
Sbjct: 24  LVISTDGTYPPFSEMASDGQMTGFDIDIGKALCEQMKRE---CRFEQLDWEGLIPALKTN 80

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           ++D++  + + T  R     +AF    Y +   F+      +  +   + G  + V   +
Sbjct: 81  KVDVILASMNDTPER--RESIAFTDPYYSNPGLFVRAAGSKVEPTAEGVKGKVVGVLRAS 138

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             +  +   F           F   E+ +AA  A R D    D   +    L +D     
Sbjct: 139 IFDNYVTAKFP----DADIQRFTSQEDANAAAVAGRVDLLFADKIVMDGF-LQHDEGKNF 193

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA--EELGITQKN 260
             + +          I  G  +  N +     A + A  E     + N
Sbjct: 194 EAVGETDDPEYFGAGIAIGVRKEDNALREDLNAALKAIKENGAYKKVN 241


>gi|307323417|ref|ZP_07602627.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
 gi|306890906|gb|EFN21882.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
          Length = 267

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 72/214 (33%), Gaps = 11/214 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G L    +     F   +      GFDVD    ++SA+      +   P    +    L
Sbjct: 40  SGKLTTCTHLPYPPFQSKQGK-KIVGFDVDMVDLVASALDVKQEIVD-TPFEGIQSGEDL 97

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            + Q D+ +     T +RE    L F    +   Q  +  K K   +++ L G  + VQ 
Sbjct: 98  NTNQCDVAAAGMTITDVREK--NLDFSAPYFEATQALLTTKGKPYKTLAGLKGKKLAVQQ 155

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT E     + K        + FE +  +  A +  + DA   D   LY         +
Sbjct: 156 GTTGESYAQKHAK----GVKLVQFEDLALLLTAVKTGQTDAGINDNGVLYDYV---KDNA 208

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +  +  +  +      A+  G+      +     
Sbjct: 209 DTTVTAEFDTGEQYGIAVRTGNDALRKKIDAVLK 242


>gi|88797187|ref|ZP_01112777.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
 gi|88780056|gb|EAR11241.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
          Length = 262

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 80/258 (31%), Gaps = 13/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M   F   ++ L+              + D+     +  G++     +     +G   GF
Sbjct: 1   MKFRFIALVIALVGTATAGSWYFFKPSMPDLSNYQNITFGVDAPYPPYEFFDESGKLTGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+        +     + Q+           L +++ D++  +      R+    + F 
Sbjct: 61  EVELGNKACEYLG---IQCQWQVTPWDTIMDDLNAREFDVIMSSMSINNERKKI--VDFG 115

Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y     F   K + I   S  QL G ++ VQ GT     + D + ++      +  +
Sbjct: 116 EPYYSTPSVFFARKGEAIPGNSNRQLRGKTVAVQRGTLQHDYMLDNYDSN---VTIMALD 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E++ AA+RA   D    D                 ++   I     +  A  + D + 
Sbjct: 173 GWEDVSAAFRAAEADLVFTDYPQWEEEFFLER--VYEIVGDAISLGDGVGLAFRKDDDDL 230

Query: 238 YNIVSWTHYAMVTAEELG 255
              +      +    E  
Sbjct: 231 RKALDIALNELKNNGEYQ 248


>gi|186894152|ref|YP_001871264.1| extracellular solute-binding protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|186697178|gb|ACC87807.1| extracellular solute-binding protein family 3 [Yersinia
           pseudotuberculosis PB1/+]
          Length = 254

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 14/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 1   MKK---LSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A    +     K+ ++  +       L + + DI       T  RE    L+   
Sbjct: 58  VDMANAFGEDL---KLKVNFVSTSWPTLSEDLAADKFDIAMGGVTATPGREAQFALSHAV 114

Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +           K     ++         + V  G T +  +     A+  +   I  + 
Sbjct: 115 VKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFV----DANIKQAQIIRTKD 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                   R    D    D   +      +  P   
Sbjct: 171 NVANLQGIRDKSADIMFTD--LIEGDYYQSKEPGVF 204


>gi|315613252|ref|ZP_07888162.1| glutamine ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sanguinis ATCC
           49296]
 gi|315314814|gb|EFU62856.1| glutamine ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sanguinis ATCC
           49296]
          Length = 721

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +F    +          K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKILACLLILFPIFSLGMA----------KADTVKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQSGQADAIMAGMTKTKERE--NVFTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+   +LSG ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKANKITKYEELSGKTVGVKNGTAAQRFLESIKDKYGFS--IKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   +A   D   +         
Sbjct: 164 LMNNSLSAGAVNAIMDDKPVIEYAINQGQD 193



 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 10/190 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               ++    F    ++  + G D+D  +A++     +   I+           A+Q+ Q
Sbjct: 270 IIASDSSFAPFVFQNSSNQYTGIDMDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQ 326

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+ +    F    Y       + +   I+S   L   ++ V+ GT +
Sbjct: 327 ADGIIAGMSVTDARKET--FDFSESYYTANTILGVKESSTIASYEDLKDKTVGVKNGTAS 384

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSE 213
           +  L +    +   Y    F     +  +      DA   D        +       P  
Sbjct: 385 QTFLTEN--QNKYGYKIKTFADGASMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIA 442

Query: 214 HVILPDIISK 223
              + +    
Sbjct: 443 GTPIGETAFA 452


>gi|295395027|ref|ZP_06805237.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972094|gb|EFG47959.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 529

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 78/263 (29%), Gaps = 18/263 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKA-NGDWKGFD 60
           + +  L +  FT           + +             +T    F       G   G D
Sbjct: 50  LLVGVLTVAGFTPAHAQTDTSKTVAQTSGAQGKKYTIATDTTFAPFEFRDPATGKLTGID 109

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++     +   ++   +  +    A+ + Q D +      T  R+      F  
Sbjct: 110 MDLLKAIAEDQGFE---VEIQSVGFQAAVTAVDAGQADGVIAGMGITDERK--QKFDFSE 164

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    I      I     L G ++  + GT  E    +  + HN        ++ 
Sbjct: 165 PYFDSGIQMAISENNDEIKGYEDLEGKTVVAKTGTEGEAVAKELAEEHNF--RIKGLDQS 222

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWY 238
             +  + +     A   D   L       ++ +   I+ D +  S    A+ +  +TE  
Sbjct: 223 ATMYESVKNGTAVAVFDDYPVLA---YGVEQGNGLKIVTDKVPGSQYGFAVKKDHNTELL 279

Query: 239 NIVSWTHYAMVTAEELGITQKNI 261
              +     +  + E      + 
Sbjct: 280 EAFNAGLKNLKDSGEYDKVVDSY 302


>gi|149003550|ref|ZP_01828424.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
 gi|147758486|gb|EDK65485.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
          Length = 521

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 84/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIT 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + DT    I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDTRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|308186918|ref|YP_003931049.1| ABC transport system, periplasmic solute-binding protein precursor
           [Pantoea vagans C9-1]
 gi|308057428|gb|ADO09600.1| Putative ABC transport system, periplasmic solute-binding protein
           precursor [Pantoea vagans C9-1]
          Length = 258

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 78/250 (31%), Gaps = 23/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++   + +  T  +              L+ G+ +    F    A G+ +GFD
Sbjct: 1   MKK--LNALFLALGMMTTVQALAQD----------LRYGVESQYPPFESRNAKGELEGFD 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   A+  A         ++  +      ALQ+K+ D ++   + T  R  S+    +P
Sbjct: 49  IELGNAICKA---GNFSCHWVESSFDALIPALQAKKFDAINSAMNITEARAKSIAFT-QP 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I            +    +   L G +I V  G+  E     +++          ++   
Sbjct: 105 IYRIPTMLVAKKGENLAPTAEGLKGKNIGVLQGSIQETYAKKHWETQG--VTVTSYQDQN 162

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDT 235
           ++     A R D      +A  +  L   +      +   +         +   + + D 
Sbjct: 163 QVYNDMVAGRLDGTLVMSAAGQSGFLDKPQGKGFGFVGKPVEDDAILGSGIGYGLRKDDA 222

Query: 236 EWYNIVSWTH 245
                +    
Sbjct: 223 PLKQSLDAAI 232


>gi|238750614|ref|ZP_04612114.1| ABC transporter, solute-binding component [Yersinia rohdei ATCC
           43380]
 gi|238711262|gb|EEQ03480.1| ABC transporter, solute-binding component [Yersinia rohdei ATCC
           43380]
          Length = 272

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 74/238 (31%), Gaps = 13/238 (5%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +      F++ + +A +L  IK    +          F  V  NG   G+DVD    +  
Sbjct: 1   MLCAASVFSAAAHSADLLDRIKADKTITIASEARYAPFESV-ENGKIVGYDVDLMHHILQ 59

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
                  +++ L L  +     L +K+ D +         R      AF           
Sbjct: 60  KNL-PGVEVKQLDLPFQGILPGLDAKKFDFVVTAVTVNKQR--MDHFAFTVPIAESTVAL 116

Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-----IVFERVEEID 183
           +       I+++  LSG  +  QAG+     L D+ +       P       +   +E  
Sbjct: 117 LKRDNDKSINTLDDLSGKVVGSQAGSGQLQVLQDFNEKLKASGKPGLKEIKQYVSFDEAY 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNI 240
           A     R D     ++ L  L     RP     L P +   +       + D     +
Sbjct: 177 ADLANKRLDGVAQSLANLGPLI--KTRPGIFTTLKPMLGPTTYFGWVGRKDDDSATLV 232


>gi|227532737|ref|ZP_03962786.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189571|gb|EEI69638.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 496

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 82/278 (29%), Gaps = 18/278 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +     G +     F     +  + G D+D  +A++     +  K++  PL       A
Sbjct: 41  AQKTYTIGTDVTFAPFEFANQDNKYVGIDLDLIKAIAK---TEGFKVEIKPLGFNAAVQA 97

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++KQID +      T  R            Y  G    + KK  I S+  L G  + V+
Sbjct: 98  LEAKQIDGVIAGMSITPER--QQKFLMSDPYYKSGVVMAVAKKGTIKSLKDLRGKRVAVK 155

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +          +      + F+    +          A   D   +   +   +  
Sbjct: 156 TGTDSADYANSIKDKYGFST--VTFDDSNNMYQDVITGNSAACFEDQPVM---QYGINNG 210

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
               I+     +     A  + +       +           Y  +    LG       +
Sbjct: 211 MALKIIGKPAREGSYGFAASKNNRALITKFNAGLKKLRANGQYDKIIERYLGNGSAKSQK 270

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            +        + F G+ K++      GL +     ++ 
Sbjct: 271 TAAGNAQTTDRSFFGLLKANWGTLMSGLEETMVLTVVA 308


>gi|167855353|ref|ZP_02478120.1| arginine ABC transporter, substrate-binding protein [Haemophilus
           parasuis 29755]
 gi|167853501|gb|EDS24748.1| arginine ABC transporter, substrate-binding protein [Haemophilus
           parasuis 29755]
          Length = 241

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 27/257 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +   +                +   +      F +    G+  GFD
Sbjct: 1   MKKLLLATILAATAVSAYA-------------NDKITFAMEPSYPPFEQTNEKGEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +  ++   +      +L   +    +  +   +    +  +AF  
Sbjct: 48  VDIANAICKEV---QATCEFKSQSFDALIPSLIKGRGGFDAAISAIDITEARAKQVAFSA 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     +I  + K ++S       ++ VQ GTT +       K    +Y    +  ++
Sbjct: 105 PYYESSASYIALQGKDLASAK-----TVGVQNGTTYQQYATAEAK----QYQAKSYANLQ 155

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD   L  +             +       + L  A+ + +TE  
Sbjct: 156 DAILDLKNGRIDLIFGDTDVLKDMLGKIPEAQFVGEKVTDKRYFNNGLGIAVKKSNTELV 215

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+  + E  
Sbjct: 216 EKLNKGIAAIKASGEYQ 232


>gi|86153481|ref|ZP_01071685.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843207|gb|EAQ60418.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 75/245 (30%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +      I FF   S+             L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-----FISFFALNSSAKD----------LVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDKRKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +GD    
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALK 216

Query: 239 NIVSW 243
           + +  
Sbjct: 217 DKLDN 221


>gi|108808791|ref|YP_652707.1| extracellular solute-binding protein [Yersinia pestis Antiqua]
 gi|108810915|ref|YP_646682.1| extracellular solute-binding protein [Yersinia pestis Nepal516]
 gi|145600274|ref|YP_001164350.1| extracellular solute-binding protein [Yersinia pestis Pestoides F]
 gi|162421108|ref|YP_001605505.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Yersinia pestis Angola]
 gi|165925818|ref|ZP_02221650.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936659|ref|ZP_02225226.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010038|ref|ZP_02230936.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213126|ref|ZP_02239161.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399107|ref|ZP_02304631.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421592|ref|ZP_02313345.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423705|ref|ZP_02315458.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470680|ref|ZP_02335384.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis FV-1]
 gi|270489309|ref|ZP_06206383.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294505052|ref|YP_003569114.1| extracellular solute-binding protein [Yersinia pestis Z176003]
 gi|108774563|gb|ABG17082.1| extracellular solute-binding protein [Yersinia pestis Nepal516]
 gi|108780704|gb|ABG14762.1| extracellular solute-binding protein [Yersinia pestis Antiqua]
 gi|145211970|gb|ABP41377.1| extracellular solute-binding protein [Yersinia pestis Pestoides F]
 gi|162353923|gb|ABX87871.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis Angola]
 gi|165915308|gb|EDR33918.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922430|gb|EDR39607.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990945|gb|EDR43246.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205913|gb|EDR50393.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960511|gb|EDR56532.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051611|gb|EDR63019.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057875|gb|EDR67621.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|262363113|gb|ACY59834.1| extracellular solute-binding protein [Yersinia pestis D106004]
 gi|262367043|gb|ACY63600.1| extracellular solute-binding protein [Yersinia pestis D182038]
 gi|270337813|gb|EFA48590.1| bacterial extracellular solute-binding protein, family 3 [Yersinia
           pestis KIM D27]
 gi|294355511|gb|ADE65852.1| extracellular solute-binding protein [Yersinia pestis Z176003]
          Length = 254

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 14/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 1   MKK---LSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A    +     K+ ++  +       L + + DI       T  RE    L+   
Sbjct: 58  VDMANAFGEDL---KLKVNFVSTSWPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAV 114

Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +           K     ++         + V  G T +  +     A+  +   I  + 
Sbjct: 115 VKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFV----DANIKQAQIIRTKD 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                   R    D    D   +      +  P   
Sbjct: 171 NVANLQGIRNKSADIMFTD--LIEGDYYQSKEPGVF 204


>gi|33592662|ref|NP_880306.1| glutamine ABC transporter periplasmic protein [Bordetella pertussis
           Tohama I]
 gi|33572308|emb|CAE41862.1| glutamine-binding periplasmic protein precursor [Bordetella
           pertussis Tohama I]
          Length = 250

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 82/246 (33%), Gaps = 18/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L           + AS  G       L    +T  V F   + N  + GFD
Sbjct: 1   MIKAKVAAVLIGASAALLGAVSTASAQGR-----ELVVATDTAFVPFEFKQGN-TYTGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +     K +  P++       LQ+K ID            +    + F  
Sbjct: 55  IDLWAAIAKEL---NLKYKLQPMDFNGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 109

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G    +  K   I +   LSG S+ V+ GT T     D+ K+        +F  +
Sbjct: 110 PYYESGLAILVSEKNDSIKAAKDLSGKSVAVKTGTATV----DFMKSQVPDAKLKLFPNI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +         R DA   D   +     T  +     ++  + S      A  +G +E   
Sbjct: 166 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGTVKSGDFYGIAFPKG-SELVP 223

Query: 240 IVSWTH 245
            V+   
Sbjct: 224 QVNKAL 229


>gi|257469980|ref|ZP_05634072.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|317064206|ref|ZP_07928691.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313689882|gb|EFS26717.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 244

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 21/251 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M K     IL L+ +             ++K    +   G N     F  +  N    G 
Sbjct: 1   MKK-----ILALLTVVMVVVFVGCGKEKEVKTTEKVYVIGTNAEYPPFEYL-ENSKIVGL 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D     S  +       ++  +N      ALQ++++DI+      +  R+    + F 
Sbjct: 55  DPDIMEEFSKRMGFQY---KWANMNFDGLISALQTRKVDIIIAGMSISDERKKY--INFS 109

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    +I  K   ++++  L      ++ GTT E  +     A       + F   
Sbjct: 110 TPYISPAMCYIALKTSPMTTIEDLENKRFGIELGTTEEDIVKKVPGA-----VIVPFSGH 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A ++ + D+   D +   A K   + P    ++   +     A A    D E  +
Sbjct: 165 TAALFALKSGKIDSMLLDAT--VAKKYLENNPDLKTVV--TVEGENKAMAFNIEDVELKD 220

Query: 240 IVSWTHYAMVT 250
                   M+ 
Sbjct: 221 KFDKVLKEMME 231


>gi|139473094|ref|YP_001127809.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes str. Manfredo]
 gi|134271340|emb|CAM29558.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes str. Manfredo]
          Length = 522

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K     S+   SGA +  Q G      L     
Sbjct: 110 ER--RNEISFSNSYYTSQPVLVVTANGKYAEAKSLKDFSGAKVTAQQGVWHVNLLTQLKG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 224 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 279


>gi|78063444|ref|YP_373352.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77971329|gb|ABB12708.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 262

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++  ++           +G   GF +D   AL + +    ++  ++  +       L 
Sbjct: 27  KEIRLAVDPTYPPLEYKLPDGTLTGFGIDITNALCAEL---RARCVWVESSFDGMIPGLL 83

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
           +++ D+++ +   T  R     +AF           I  K   +   +  L G  + V+ 
Sbjct: 84  ARKFDVIASSMTITPKR--QQQIAFTNRISNAPARLIARKGSPLLPTADALKGKRVGVEQ 141

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+         ++        + ++  +++ A     R DA      A     L   +  
Sbjct: 142 GSAQADYAVANWQPAG--VQIVSYQNQDQVYADLVTGRLDAAFQASIAASDGFLKKPQGK 199

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +   +   I             + + D +  +  +    A + A
Sbjct: 200 DFAFVGAAIDDVKYFGQGDGLGLRKQDNDLRDAFNRAL-ATILA 242


>gi|116513356|ref|YP_812262.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116092671|gb|ABJ57824.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 527

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 109/331 (32%), Gaps = 59/331 (17%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55
           M K   +  +++  ++    + S +       +  G LK G+      +   +   ANG 
Sbjct: 1   MKKHSSWISALMAAVLTLVLAVSWSQPA----QASGTLKIGMEANYAPYNWAQTTSANGA 56

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            K         G+DV   + ++  +      +            AL S +ID++      
Sbjct: 57  VKIDGTSSYANGYDVKIAKIIAKKLGKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSP 113

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLADY 163
           T  R     + F           I++K+   +    L    GA +  Q GT     +   
Sbjct: 114 TAERRK--AINFTSPYRTTNFVVIVNKQSKYAKAKYLTNFKGAKLTAQQGTLHYDLIKQL 171

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A          +    +  +  A   D Y  + + L + ++ +        S+     
Sbjct: 172 PGAKREP----ASKDFAAMRESLEAGTIDGYVAEDTELTSFQMVDSNITGVNLSKMKGFK 227

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
              S + ++  I +G+ +  + V+     + T+E   + ++ + Q  + +T  +      
Sbjct: 228 VSSSDAEVSIGIKKGNDQLLSQVNKVLAGISTSERNKLMKEAVQQQPQTSTKKE------ 281

Query: 279 IDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
                          +W   +++   NYG+M
Sbjct: 282 ---------------NWLVSMLK---NYGQM 294


>gi|302528610|ref|ZP_07280952.1| predicted protein [Streptomyces sp. AA4]
 gi|302437505|gb|EFL09321.1| predicted protein [Streptomyces sp. AA4]
          Length = 307

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 12/211 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +I+  G L+  ++     F  V+A G   G D D   A+   +        ++  +   
Sbjct: 60  EEIRSAGVLRVAMDETYPPFESVQA-GKVVGLDPDLANAIGGVLGVRAE---FVNTSFDA 115

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              +L S ++D+   +   T  RE +  +      +      +           Q+ GA 
Sbjct: 116 IIPSLTSNKVDLAMSSIGDTKERERT--IDLATYYWNGTLVLVKSGNPAQIKADQVCGAR 173

Query: 148 ICV-----QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           I V     Q  +      A    A        V++   +   A ++ R D    D   L 
Sbjct: 174 IGVIRGSLQQTSFLPSQAAKCAAAGKPAAKVEVYQNGPQAQLALQSGRIDGVMEDAPPLL 233

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           A+             P   + +P   A  +G
Sbjct: 234 AVAAQQKD-VFETAGPFFRNPNPGGVAFPKG 263


>gi|325568890|ref|ZP_08145183.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus casseliflavus ATCC 12755]
 gi|325157928|gb|EGC70084.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus casseliflavus ATCC 12755]
          Length = 283

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 71/241 (29%), Gaps = 7/241 (2%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F      +++   +  +   S L  +++   L    +  L   +      +  G+DVD  
Sbjct: 15  FLGLFTGVLLSACSKPTEEDSSLSKVEEAKTLVVATSGTLYPSSYYNDENELVGYDVDVA 74

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +  +   I +   N   +  +L   + D  + +   T  R     L+      F
Sbjct: 75  KEVAKRLGVE---ITFKEYNVDGQVSSLTRGEADFAANDFGLTDERAEKFSLSTPIKYSF 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D          GI+S+  L G         T+ + LA+ + A  + Y        ++   
Sbjct: 132 DSMIVRKSDDSGIASLEDLDGKK-AAGEPNTSYMRLAESYGAELVTYD---NATNDQYLT 187

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                R D    D                 ++     + +      ++        V   
Sbjct: 188 DVANGRTDVILNDYYLQKMAVAALPDIPVKILEDVYFNPNETGFLFVKDHKALQEKVDAV 247

Query: 245 H 245
            
Sbjct: 248 L 248


>gi|168333850|ref|ZP_02692093.1| hypothetical amino acid ABC transporter, periplasmic amino
           acid-binding protein [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 276

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 19/248 (7%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    + +  ++I+ FT+ S  A+          L+ G++     F+ + A+G+  GF
Sbjct: 1   MKKIIARIFLGGILIVGFTACSGEAA------DENVLRVGVDLKFPPFSYLDADGNPAGF 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A    I  D   ++ +  +      AL++  +DIL  +   +  R       F 
Sbjct: 55  EIDVAEAFGEFIEKD---VEIVNTDFSLLLPALETGDVDILIADMGKSEERAK--KADFS 109

Query: 120 PITYFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKYHPIV 175
               +  + G I         ++  +  S          + LA         +M      
Sbjct: 110 DPYRYTYRLGVINKDFAQEHGITNSTPESEIFAIEGAKFVGLAGTKGVSYPQSMGADVTE 169

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              +          + D       A          P   V+      +   +  +  GD 
Sbjct: 170 VTEIGIALIEISNGQSDVLLTSNEAFA---FQAADPENRVVYTGSNYQEGSSFVVRLGDK 226

Query: 236 EWYNIVSW 243
           +  +  + 
Sbjct: 227 QLLDQANE 234


>gi|89068766|ref|ZP_01156152.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Oceanicola granulosus
           HTCC2516]
 gi|89045729|gb|EAR51791.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Oceanicola granulosus
           HTCC2516]
          Length = 253

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 69/203 (33%), Gaps = 14/203 (6%)

Query: 36  LKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L+ G +T       +  A G   GFDVD   A+   I        ++       F ALQ+
Sbjct: 33  LRVGSDTTSPPMEYIDTATGQIVGFDVDVVNAICERINCQAE---FITTGWDGIFAALQN 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQA 152
            Q D+++     T  R+  +   F      + Q  +     G  SV      G S+  QA
Sbjct: 90  GQFDLVASGVSITDERDQVM--DFTDPYIVNSQAILTRVDAGEMSVEDFESGGLSLAAQA 147

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT  +T A+     N       ++       A +    D    + +   A +       
Sbjct: 148 NTTDSITAAEIVGREN----VQAYDTFNGAVLALQNGDVDGVVINGANAAAYEAQFA--G 201

Query: 213 EHVILPDIISKSPLAPAIIQGDT 235
           + V+    +   PL     +GD 
Sbjct: 202 QLVVGVTGLKADPLGLVFQEGDP 224


>gi|148983846|ref|ZP_01817165.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|147923993|gb|EDK75105.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|301799546|emb|CBW32096.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae OXC141]
          Length = 521

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 85/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K +      L+++        A          +L+ G+      F       +NG  K
Sbjct: 1   MRKIYLSIFTSLLLMLGLINVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAIK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLIKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|94987869|ref|YP_595970.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS9429]
 gi|94541377|gb|ABF31426.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS9429]
          Length = 528

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 7   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 58

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 59  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 115

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K     S+   SGA +  Q G      L     
Sbjct: 116 ER--RNEISFSNSYYTSQPVLVVTANGKYAEAKSLKDFSGAKVTAQQGVWHVNLLTQLKG 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 174 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 229

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 230 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 285


>gi|153947091|ref|YP_001402236.1| polar amino acid ABC transporter periplasmic protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|152958586|gb|ABS46047.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 14/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 3   MKK---LSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A    +     K+ ++  +       L + + DI       T  RE    L+   
Sbjct: 60  VDMANAFGEDL---KLKVNFVSTSWPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAV 116

Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +           K     ++         + V  G T +  +     A+  +   I  + 
Sbjct: 117 VKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFV----DANIKQAQIIRTKD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                   R    D    D   +      +  P   
Sbjct: 173 NVANLQGIRDKSADIMFTD--LIEGDYYQSKEPGVF 206


>gi|86152121|ref|ZP_01070333.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|121613400|ref|YP_001000504.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005440|ref|ZP_02271198.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315124337|ref|YP_004066341.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|66735094|gb|AAY53787.1| GlnH [Campylobacter jejuni]
 gi|85840906|gb|EAQ58156.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|87249501|gb|EAQ72461.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315018059|gb|ADT66152.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 74/241 (30%), Gaps = 26/241 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  +++P   +      A+ +G+ E  
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILVPFQENPEFWGIAVQKGNAELK 216

Query: 239 N 239
            
Sbjct: 217 K 217


>gi|330872999|gb|EGH07148.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 263

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 84/258 (32%), Gaps = 17/258 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++ L L +        +AS L  I + G L          ++ ++ +G+ +G D+ 
Sbjct: 5   KHSVLTALLLGMAGMAQAQESASHLDKIVQTGQLAVCTTGDYKPYSLLREDGEHEGIDIT 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R+L+ ++    + +Q++P   K     + + + DI       +L R+     +     
Sbjct: 65  MARSLAKSLG---ATVQWVPTTWKTLLPDMVAGKCDIGMGGISVSLERQKKAFFSSTLDV 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                      +    +V Q++  S+ +           + F   ++    + F   + I
Sbjct: 122 DGKIPLVRCEDQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPNASLAFHDNKTI 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  + D    D S     +          P+ ++   +       A  + + D  W
Sbjct: 179 FQELLDKKADVMITDASEALYQQKRMPGLCAVNPTHYMQYGEK------AYLLPRDDVTW 232

Query: 238 YNIVSWTHYAMVTAEELG 255
            + V    +      E  
Sbjct: 233 KSYVDQWLHLSKATGEYQ 250


>gi|323126570|gb|ADX23867.1| putative glutamine-binding periplasmic protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 522

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 86/296 (29%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A          +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSQAQADQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKIAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTD 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++    K  G +S+   + A +  Q G      L     
Sbjct: 110 ERRK--EITFSNSYYTSEPVLVVAADGKYAGATSLDDFANAKVTAQQGVWHVNLLTQLKD 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  +       +         
Sbjct: 168 AKLQT----PMGDFSQMRQALSSGVIDAYISERPEAMTAEAADSHFKMITLKKGFTVSES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + +      V+         + + +    I +   +    D +  FLG
Sbjct: 224 DAAIAVGMKKNDNRIATVNQVLEGFSQTDRMALMDDMITKQPMEKKAEDAKASFLG 279


>gi|307329645|ref|ZP_07608803.1| Prephenate dehydratase [Streptomyces violaceusniger Tu 4113]
 gi|306884703|gb|EFN15731.1| Prephenate dehydratase [Streptomyces violaceusniger Tu 4113]
          Length = 282

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 15/230 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           +     ++L  + +RG L+         F+      G + G D+     L+ ++   P  
Sbjct: 42  ARPQRGTLLDRVPERGVLRVCTTGDYRPFSHRDPKSGAYTGIDIKMAGDLAKSLDAKP-- 99

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
             ++P         L + + D+       TL R      +F      DG+  I+  +   
Sbjct: 100 -AFVPTTWATLVDDLAAGRCDVGMGGVSVTLARAR--KASFSEPYLTDGKTPIVRCEDKA 156

Query: 138 SS----VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                      G  + V  G T E    ++ +AH  +    V      I     A R D 
Sbjct: 157 RYRTLEDIDRPGVRVVVNPGGTNE----EFARAHVKRATLTVHPDNTTIFDEIIAGRADV 212

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              D S        +      V   +  S S  A A+ +GD ++   V  
Sbjct: 213 MMTDASETRYQSAIHPE-LCAVHPDEPFSFSEKAYALPRGDAQFTEYVDQ 261


>gi|26991116|ref|NP_746541.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
 gi|24986155|gb|AAN70005.1|AE016639_1 amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas putida KT2440]
          Length = 284

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 72/251 (28%), Gaps = 9/251 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             L   I      +  A+ L  +K++G ++ G       FA    +G   G   +   A+
Sbjct: 14  LTLACAIASIAVSAHAATTLDSLKEQGSVRIGYANET-PFAYTGTDGKVTGESPEIATAI 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              +      +  +          L++ + D ++     T  R     + F    Y    
Sbjct: 73  FKQLG--IKDVNGVLTEWGSLIPGLRAGRFDAIAAGMYITPAR--CKQVLFTDPHYQLPD 128

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             ++ K     + S   ++       A     + L     +       +          A
Sbjct: 129 ALLVPKGNPKELFSYEDVAKNPEVKLAIMAGTVELQYARDSGVKDEQILQVPDTTAQLQA 188

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHV--ILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            RA R DA  G    +  L        E +     D       A A    D E  + V+ 
Sbjct: 189 VRAKRADAAVGTQLTMKGLAAKGGDSVEAMTDFKDDPSHIGYGALAFRPEDKELRDQVNA 248

Query: 244 THYAMVTAEEL 254
                + +EE 
Sbjct: 249 QLKKWLGSEEH 259


>gi|38347924|ref|NP_941173.1| exported solute-binding protein [Serratia marcescens]
 gi|152973762|ref|YP_001338801.1| hypothetical protein KPN_pKPN5p08191 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|38259401|emb|CAE51628.1| exported solute-binding protein [Serratia marcescens]
 gi|150958544|gb|ABR80571.1| hypothetical protein KPN_pKPN5p08191 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 250

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 85/251 (33%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        + L ++  ++          +  +  L  G++T  V F   + N  + GFD
Sbjct: 1   MSALLKKLKITLTLVACSASFA-------VMAQDKLLVGVDTAFVPFEFKQGN-KYVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +       +  P++       LQS+ +D+       T  R+    + F  
Sbjct: 53  IDLWEAIAKKM---NVSYELRPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSE 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y       +      I+  S+L+G  + ++ GT     +   +KA+      + F  +
Sbjct: 108 GYYDADLLMAVKSGDNSITKFSELAGKKVGLKQGTAAASFMKSKYKANY-----VEFPNI 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEW 237
           +      +A   DA     S      +      +     +  S  P     A+ + ++  
Sbjct: 163 DNAYLDLQAGNLDAVV-HDSPNVLYYVKTAGGGKVKSTGETDSILPQKYGFALQK-NSSL 220

Query: 238 YNIVSWTHYAM 248
              V     A+
Sbjct: 221 TPKVDAALKAL 231


>gi|296111214|ref|YP_003621595.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832745|gb|ADG40626.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 482

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 79/258 (30%), Gaps = 23/258 (8%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K       V++  L I   T+    A +   +          +     F     N  +
Sbjct: 1   MKKIRKFLLVVALFALTIFGLTTDVHAAKVPNYV-------ITTDATYPPFDFQDKNNQY 53

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D +  + ++     +       P++      ++ S Q D +      T  R+     
Sbjct: 54  TGIDQEILKTIAKR---EGFTYTLKPMSFNAATQSVSSGQADGVIAGMSITDERKAV--F 108

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y  G G+ + K   I S+S L G ++ ++ GT+         K +  K     F
Sbjct: 109 DFGTPYYRSGIGWAVKKGSLIKSLSDLKGQTVAIKTGTSGADYALSIQKQYGFK--VTYF 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGD 234
              + +          A  GD+  +   +      ++  ++              + +G 
Sbjct: 167 NDSDTLYNDVINGNAQATFGDLPVI---QYAVKNGTQLKVMNAKSPIQAGWYGFGVQKGK 223

Query: 235 TEWYNIVSWTHYAMVTAE 252
                      +A + ++
Sbjct: 224 NAQLLKSFNKGFAAIKSD 241


>gi|71902896|ref|YP_279699.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS6180]
 gi|71801991|gb|AAX71344.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS6180]
          Length = 528

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 7   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 58

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 59  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 115

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 116 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 174 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 229

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 230 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 285


>gi|89893953|ref|YP_517440.1| hypothetical protein DSY1207 [Desulfitobacterium hafniense Y51]
 gi|219668328|ref|YP_002458763.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
 gi|89333401|dbj|BAE82996.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538588|gb|ACL20327.1| extracellular solute-binding protein family 3 [Desulfitobacterium
           hafniense DCB-2]
          Length = 282

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 91/292 (31%), Gaps = 34/292 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEV---K 51
           M +   + +  L+ +   +    +S            +    K G+  G   F       
Sbjct: 1   MKRKLSIVMAGLLSVMLLATGCGSSGQGNTQTPDAGNEINTFKVGLEAGYAPFNWTQMND 60

Query: 52  ANGDWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           +NG  K         G+DV+  + +++ +  +   +  +         AL S +ID +  
Sbjct: 61  SNGGVKIDGGAEYAGGYDVEIAKKIAAGLGKE---LVIVKTEWDGLVPALTSGKIDAIIA 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELT 159
               T  R+ +  + F  I Y      ++    K +  +S+   +GA I  Q  T     
Sbjct: 118 GMSPTEERKAT--IDFSDIYYQSDLVIVVKSGSKYENSTSLKDFNGAKITAQLNTFHYGV 175

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           +                +    +  A ++   D Y  +     + +  N      V L D
Sbjct: 176 IDQIPGVAKQT----AMDNFPAMRVALQSGMIDGYVSERPEGVSAQAANSDFK-MVELTD 230

Query: 220 IISKSPLAPAII---QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
               SP   AI    +  +E    ++     +  AE + I    I       
Sbjct: 231 GFKTSPEDTAIAVGVKKGSELTAKINEILKGIPEAERIQIMDNAIKNQPAAN 282


>gi|326384495|ref|ZP_08206175.1| extracellular solute-binding protein family 3 protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196840|gb|EGD54034.1| extracellular solute-binding protein family 3 protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 337

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 77/247 (31%), Gaps = 28/247 (11%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LSSAIFDDPSKIQY 80
           +++  IK  G +  G      G    + +G   GFD          ++  +     +I +
Sbjct: 38  NLVESIK-SGKVVLGTKYDQPGLGLQQPDGSVVGFDPSVSEYVVDHIADKLGVPHPEITW 96

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
               + +R   + + ++D+++        R     ++F        QG ++      ++S
Sbjct: 97  RETPSAQRETLIGNGEVDMIAATYSINEARAK--KVSFAGPYLVTYQGLLVRADDSTLNS 154

Query: 140 VSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           ++ L +G  +C  +G+T    +    KA         ++       A R  + DA T D 
Sbjct: 155 LTDLNNGKKLCSVSGSTPAQNV----KAQLPGVQLQEYDSYSSCVEALRRGKVDALTTDE 210

Query: 199 SALYALKLTNDR---------------PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           + L                                   S       + Q   +    V+ 
Sbjct: 211 TILAGYANRYPGEFKLVSMTYPKDACVKGALKKQGQPFSTERYGIGMAQDYPDSVAAVNE 270

Query: 244 THYAMVT 250
              +M+ 
Sbjct: 271 AIESMLA 277


>gi|288933967|ref|YP_003438026.1| prephenate dehydratase [Klebsiella variicola At-22]
 gi|288888696|gb|ADC57014.1| Prephenate dehydratase [Klebsiella variicola At-22]
          Length = 278

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 76/253 (30%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   + L   +    A  +  I+  G LK G+       A   A G+ +G+D
Sbjct: 26  MK----LTVGLALTLAIMTCGAQARDMQTIEHSGELKVGVPGDYAPLAFRNAAGELQGYD 81

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R L   +     K+ ++  +       L++ + DI       T  R     L+   
Sbjct: 82  VDMARDLGRTLG---LKVSFVYTSWPALAADLRADKFDIAMGGVTQTPARAKDFALSHPV 138

Query: 121 ITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +               + S+         + V  G T +  + ++ K        I  + 
Sbjct: 139 VANGKIALANCQAAPRLGSLAKIDRPEVKVVVNPGGTNQSFVDEHIKQA----QIIRVQN 194

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDT 235
             +   A R    D    D   +      +  P         P   + S     + + + 
Sbjct: 195 NVDNLEALRQKTADMMVTD--LIEGDYYQSKEPGVFCVANETPFAGTASDKVYMMNKDNP 252

Query: 236 EWYNIVSWTHYAM 248
                V+    + 
Sbjct: 253 ALLEKVNQWLDSQ 265


>gi|146317961|ref|YP_001197673.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|146320148|ref|YP_001199859.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           98HAH33]
 gi|145688767|gb|ABP89273.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
 gi|145690954|gb|ABP91459.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           98HAH33]
          Length = 317

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 77/262 (29%), Gaps = 20/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K    S L +  L   + S             +    I++ G LK      L   +  
Sbjct: 27  MLKKVLASALLVSTLTLAACSSSSSNTSSSSAEQTQWEKIQEAGVLKVATPGTLFPTSYY 86

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  G+++D    +   +     +I+Y  +   E F A+ S ++DI   N D T  R
Sbjct: 87  NDAKELVGYEIDMINEIGKRL---KLEIEYQEIGVAEAFTAVDSGKVDISVNNFDMTEAR 143

Query: 111 EISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +   G  +          + LS  +     G      +    +    
Sbjct: 144 KE--KYNFSIPYKYSVGGYIVREDGSSGIEAADLSDWTGKKAGGGAGTQYMK-IAEKQGA 200

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSP--L 226
           +         +         R D    D  + + A+K  N    +  +       +P   
Sbjct: 201 EPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVMAIKWANANFPDIKVKMGEAKYNPTEQ 260

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
              + + DT     +     AM
Sbjct: 261 GIVMSKADTSLKEKIDEALEAM 282


>gi|308181824|ref|YP_003925952.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|308047315|gb|ADN99858.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 271

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 78/260 (30%), Gaps = 26/260 (10%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILG------------DIKKRGFLKCGINTGLVGF 47
           M K      L ++ L  T + +   +                ++K G L  G+      +
Sbjct: 1   MKKWLKAVSLTILGLALTVTLTACGNSSSSKSSTSSTSSQLKLQKSGTLTIGLEGTFQPY 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           +    +G   GF+VD  +A++  +       +++P         L   + D++  +   T
Sbjct: 61  SYR-KDGKLTGFEVDLGKAVAKKLGLKA---KFVPTKFDSLIAGLDVDKYDVVINDIAET 116

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R       F     +      + K   I+ ++ + G      A TTT     D   A 
Sbjct: 117 AQR--KQKYLFSTPYIYSKSELAVKKGSSINKITDIKGKK---VAQTTTSNNATD---AK 168

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPL 226
            +       +  ++        R         A YA    N + S + +     I    +
Sbjct: 169 RLGATVTPTDGFQQSIDLVNQGRVAGTINSREAFYAYLKQNPKASLKFISGGSEIKTQKI 228

Query: 227 APAIIQGDTEWYNIVSWTHY 246
              + +        +S    
Sbjct: 229 GAIVTKKHASLQKQLSKAIQ 248


>gi|22124758|ref|NP_668181.1| hypothetical protein y0847 [Yersinia pestis KIM 10]
 gi|45440201|ref|NP_991740.1| extracellular solute-binding protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|153997613|ref|ZP_02022713.1| probable extracellular solute-binding protein [Yersinia pestis
           CA88-4125]
 gi|218930361|ref|YP_002348236.1| putative extracellular solute-binding protein [Yersinia pestis
           CO92]
 gi|229838968|ref|ZP_04459127.1| probable extracellular solute-binding protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229896448|ref|ZP_04511616.1| probable extracellular solute-binding protein [Yersinia pestis
           Pestoides A]
 gi|229899535|ref|ZP_04514676.1| probable extracellular solute-binding protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229901129|ref|ZP_04516252.1| Cyclohexadienyl dehydratase, periplasmicprecursor [Yersinia pestis
           Nepal516]
 gi|21957578|gb|AAM84432.1|AE013687_5 hypothetical [Yersinia pestis KIM 10]
 gi|45435057|gb|AAS60617.1| probable extracellular solute-binding protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|115348972|emb|CAL21932.1| probable extracellular solute-binding protein [Yersinia pestis
           CO92]
 gi|149289250|gb|EDM39330.1| probable extracellular solute-binding protein [Yersinia pestis
           CA88-4125]
 gi|229681854|gb|EEO77947.1| Cyclohexadienyl dehydratase, periplasmicprecursor [Yersinia pestis
           Nepal516]
 gi|229687027|gb|EEO79102.1| probable extracellular solute-binding protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695334|gb|EEO85381.1| probable extracellular solute-binding protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229700522|gb|EEO88553.1| probable extracellular solute-binding protein [Yersinia pestis
           Pestoides A]
 gi|320016537|gb|ADW00109.1| putative extracellular solute-binding protein [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 14/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 3   MKK---LSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A    +     K+ ++  +       L + + DI       T  RE    L+   
Sbjct: 60  VDMANAFGEDL---KLKVNFVSTSWPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAV 116

Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +           K     ++         + V  G T +  +     A+  +   I  + 
Sbjct: 117 VKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFV----DANIKQAQIIRTKD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                   R    D    D   +      +  P   
Sbjct: 173 NVANLQGIRNKSADIMFTD--LIEGDYYQSKEPGVF 206


>gi|283957193|ref|ZP_06374657.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791369|gb|EFC30174.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 26/241 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIISSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +G+ E  
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNAELK 216

Query: 239 N 239
            
Sbjct: 217 K 217


>gi|119963732|ref|YP_948456.1| amino acid ABC transporter [Arthrobacter aurescens TC1]
 gi|119950591|gb|ABM09502.1| putative amino acid ABC transporter [Arthrobacter aurescens TC1]
          Length = 347

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 85/241 (35%), Gaps = 20/241 (8%)

Query: 18  TSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
           T  + + + L  I K        G L+ G  +       +  +G++ G+D +  RA+   
Sbjct: 81  TFTTADVTALDQIDKSKLGLITDGTLRVGTLSDAPPNIFIDPSGNFTGYDNELLRAIGDK 140

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     K+++   +       + +KQ D+ S +   T  R  ++G  F     F     +
Sbjct: 141 LG---LKVEFASTDFSALLSQVGNKQFDVGSSSISTTDARRKTVG--FTNGYDFGYMAIV 195

Query: 131 MHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
                 ++  + +  G  I V  GT     + D +  + +K  P+ F     +    +  
Sbjct: 196 TKSDSKVTGFADVKEGLRIGVVQGT-----VQDDYMTNTLKIEPVRFPDYNTVYGNVKNG 250

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           + DA+              D       + +  + +  A  + + +    + ++    A++
Sbjct: 251 QIDAWVAPSQQAEGQVKEGDNTKIAEKVVNTQNFTAYA--VNKDNQPLIDALNSGLDAVI 308

Query: 250 T 250
            
Sbjct: 309 A 309


>gi|303257954|ref|ZP_07343963.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|302859297|gb|EFL82379.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderiales bacterium 1_1_47]
          Length = 255

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 13/219 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S S +   L  IK  G LK G+      F+         G+DV+  + L+  +       
Sbjct: 13  SASASQDHLARIKSSGELKVGLEGDWQPFSFHNEKDQLVGYDVEVAQNLAKKLGVKA--- 69

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGI 137
           + +       F  + + + D++    D T  R  +    F     +D    I       I
Sbjct: 70  KIVEGPWDGLFAGMDTGRYDLVINGVDVTPDRAKT--YDFSTPYAYDRTVLITRSDNNDI 127

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S + L G +     G+T +                   + + E     +  +  A T +
Sbjct: 128 HSFNDLKGKTTANSIGSTYQEI------GEKYGAKVSGVDTLAETLQMVKNRQVQA-TIN 180

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            S  Y   + +       I   +   +  A  + +G+  
Sbjct: 181 ASTSYGDYMKHRPDEPLKIAATMDKVTEYAIPMKKGEDN 219


>gi|51595139|ref|YP_069330.1| amino acid ABC transporter perplasmic-binding protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|51588421|emb|CAH20029.1| probable ABC transporter, perplasmic amino acid binding protein
           [Yersinia pseudotuberculosis IP 32953]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 14/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 3   MKK---LSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A    +     K+ ++  +       L + + DI       T  RE    L+   
Sbjct: 60  VDMANAFGEDL---KLKVNFVSTSWPTLSEDLAADKFDIAMGGVTATPGREAQFALSHAV 116

Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +           K     ++         + V  G T +  +     A+  +   I  + 
Sbjct: 117 VKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFV----DANIKQAQIIRTKD 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                   R    D    D   +      +  P   
Sbjct: 173 NVANLQGIRDKSADIMFTD--LIEGDYYQSKEPGVF 206


>gi|170694837|ref|ZP_02885987.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170140197|gb|EDT08375.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 270

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 11/247 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M        L +   F    +T A    D+     G +  G++     ++ +  NG   G
Sbjct: 1   MRLLRLARHLAVAASFLVGVTTAAHAADDVGTLTPGKIVAGVDANNKPYSYID-NGKMTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+  RA+++ +        +   +      ++ ++Q+D+ + +   T  R     + F
Sbjct: 60  FDVELVRAIAAKLG---LTADFRAQDFAGLLPSVANQQVDLAAGSISITKERLKM--VDF 114

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                             I +               T E T +  +         + F  
Sbjct: 115 SEGYLTGLLSVGTLPDSTIGADVASVKDKRIGVVQGTIEDTYSQSY---LPGAQIVRFPN 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +     A R    D Y  D + L  L+           L    S  P    I +G+ +  
Sbjct: 172 INAGFLALRNKYIDGYFIDKTLLEGLQGKYPDLKLADKLDISASNLPAGFPIRKGNAKLE 231

Query: 239 NIVSWTH 245
             V+   
Sbjct: 232 AAVNKAI 238


>gi|168490636|ref|ZP_02714779.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
 gi|183574959|gb|EDT95487.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
          Length = 521

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|16519951|ref|NP_444071.1| probable periplasmic amino-acid binding protein y4tE of
           ABC-transporter [Sinorhizobium fredii NGR234]
 gi|2500691|sp|P55659|Y4TE_RHISN RecName: Full=Probable amino-acid ABC transporter
           periplasmic-binding protein y4tE; Flags: Precursor
 gi|2182635|gb|AAB91858.1| probable periplasmic amino-acid binding protein y4tE of
           ABC-transporter [Sinorhizobium fredii NGR234]
          Length = 300

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 81/255 (31%), Gaps = 8/255 (3%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             S+   + LF ++    A  L ++K RG++   I   + G +    NG+ KG + D  R
Sbjct: 22  IASVAAALSLFLSAQLAGAVTLEEVKARGYITIAIANEMPG-SYTDPNGEVKGSEADVAR 80

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +   +   P  IQ++          LQ+ + D+ +        R   +  +    +Y +
Sbjct: 81  RVLEKLGIKPENIQWVVTTFGSLIPGLQANRFDMTAAGMAIRPERCEKVIYSEPNSSYGE 140

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   I    +   S   ++       A       L           + I      +  +A
Sbjct: 141 GMLVIKGNPRNFHSYEDVAQQ--GKIAIMAGADQLRMMQALGVPNENIITIAANADAISA 198

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNI 240
               R DAY    S    L   +D+        D +    +     A +  +   +  + 
Sbjct: 199 VATGRADAYAAAASTAADLAKKSDKVELATPFQDPVIDGKIQRSWGAFSFNKESADLRDK 258

Query: 241 VSWTHYAMVTAEELG 255
            +         +E  
Sbjct: 259 FNEALLEFRKTDEFK 273


>gi|325685296|gb|EGD27410.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 527

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 109/331 (32%), Gaps = 59/331 (17%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55
           M K   +  +++  ++    + S +       +  G LK G+      +   +   ANG 
Sbjct: 1   MKKHSSWISALMAAVMTLVLAVSWSQPA----QASGTLKIGMEANYAPYNWTQTTSANGA 56

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            K         G+DV   + ++  +      +            AL S +ID++      
Sbjct: 57  VKIDGTSSYANGYDVKIAKIIAKKLGKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSP 113

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLADY 163
           T  R     + F           I++K+   +    L    GA +  Q GT     +   
Sbjct: 114 TAERRK--AINFTSPYRTTNFVVIVNKQSKYAKAKYLTNFKGAKLTAQQGTLHYDLIKQL 171

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A          +    +  +  A   D Y  + + L + ++ +        S+     
Sbjct: 172 PGAKREPAS----KDFAAMRESLEAGTIDGYVAEDTELTSFQMMDSNITGVNLSKMKGFK 227

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
              S + ++  + +G+ +  + V+     + T+E   + ++ + Q  + +T  +      
Sbjct: 228 VSSSDAEVSIGVKKGNDQLLSQVNKVLAGISTSERNKLMKEAVQQQPQTSTKKE------ 281

Query: 279 IDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
                          +W   +++   NYG+M
Sbjct: 282 ---------------NWLVSMLK---NYGQM 294


>gi|261491844|ref|ZP_05988423.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261494685|ref|ZP_05991165.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309650|gb|EEY10873.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312499|gb|EEY13623.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 245

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 29/209 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K          +LF    +  A  +  + +              F      G+  GFD
Sbjct: 8   MKKTLLT------LLFGCVVTAQAQDIKFVME---------PSYPPFEMTDEKGEIIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +    +   +          +L+ KQ D           R+    + F  
Sbjct: 53  VDIANAICKEM---NANCTFHSQPFDSLIQSLKQKQFDAAISGMGIAEPRKK--QVLFSE 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +     FI  K    + V      +I VQ GTT +  LA   K +N       +   +
Sbjct: 108 PYFPSSAAFIAKKDIDFAKVK-----TIGVQNGTTYQHYLAKEKKEYN----VKSYASYQ 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                 +  R DA  GD+  L  +   ++
Sbjct: 159 NAILDVQNGRIDAIFGDVPVLAEMARKHE 187


>gi|209515857|ref|ZP_03264719.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209503705|gb|EEA03699.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 264

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 86/240 (35%), Gaps = 21/240 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S ++ A           L+ G+      F     NG+ +G D+D   A+ +A        
Sbjct: 21  SAASAADTT-------TLRFGLEAQYPPFESKGPNGELQGLDIDVGNAVCAAA---HMTC 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +++  +      ALQ ++ D ++   + T  R     + F  + Y      I  +  G+ 
Sbjct: 71  KWVETSFDGLIPALQGRKFDAINSAMNATEQR--RQAIDFTTVVYRVPSQLIARRDSGLQ 128

Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            + + L G  I V  G+  E     +++        + ++   ++ A   A R D     
Sbjct: 129 PTPASLKGKRIGVLQGSIQETYAKVHWEPAG--VVVLPYQDQNQVYADLTAGRLDGTLVL 186

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             A     L+     ++  +   +         +A  I +GDT   + ++    A V A+
Sbjct: 187 APAGQTGFLSKPDGKDYAFVGQPVRDDKILGSGIAYGIRKGDTALRDQLNAAI-AKVQAD 245


>gi|158423696|ref|YP_001524988.1| ABC-type amino acid transport [Azorhizobium caulinodans ORS 571]
 gi|158330585|dbj|BAF88070.1| ABC-type amino acid transport [Azorhizobium caulinodans ORS 571]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 20/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M+     ++   I + F++          +  +   K G+ T  V F  V        G 
Sbjct: 10  MFLKSLAALAVGIAVGFSAP---------VMAQESFKVGVTTTGVPFTFVDTTTQQPTGA 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  +A+++ +   P    +          +L + +ID++S     T  R     + F 
Sbjct: 61  MVDLAKAIATEVGLKP---TFELTAFSALVPSLSTHKIDVISAGMLATDERRKV--VDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G    +       ++  L G  +  Q GTT     AD  KA N+     ++E +
Sbjct: 116 EPVYTYGDAMFVAADAKDVTLDDLKGQVVGAQVGTTF----ADSLKALNIFSEVKLYESI 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +I    +  R  A  GD   +      N       V     + +  +A AI + +    
Sbjct: 172 ADIMRDVKLGRIKAGFGDQPIIAYQIAKNPGLGVRLVKGYKPLKEGQVALAIAKDNPALL 231

Query: 239 NIVSWTHYAMVTAEELG 255
             V+     +  + EL 
Sbjct: 232 TKVNAAILKLKASGELD 248


>gi|325964967|ref|YP_004242873.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471054|gb|ADX74739.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 283

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 11/235 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T+ S+ A     + + G ++         +    A G + GFDV+    ++S    D 
Sbjct: 23  SSTASSSPAENPYGLIEPGTIRVASLGDSKPYTFTDAQGKFTGFDVELFTDVASRAGVD- 81

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             + +   +      A+ + Q D        T  R+ +  + F           I  K  
Sbjct: 82  -NVVFTGQDFSGLLAAVANGQFDAGVAAIGITDKRKET--VDFSDGYLAGYLTVITTKSS 138

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GIS+   LSG  + V  GT  E      F +       + F       +A  +   DA+ 
Sbjct: 139 GISNADGLSGKRLGVVQGTLQEAYAVKNFTSA----SLVRFPDNNTAISAVNSGSVDAHF 194

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D  A  + +                  +P   A+ +G T     ++      + 
Sbjct: 195 LDYEAAKSYQEQFG---LVSAADIPSFDAPAGFAVAKGKTALKEALNKGLAEAME 246


>gi|28869816|ref|NP_792435.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28853061|gb|AAO56130.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 280

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 85/243 (34%), Gaps = 11/243 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65
             +  L  +  + F    + L  +++R  L  G+      F  +       +G +V+   
Sbjct: 14  AMLGVLASIAVSGFVLADATLDKVQERHRLVVGVLLSGGPFGSIDPQTRKPQGVNVELAE 73

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +   +  +   ++ + +    R   LQ  ++D+L  N +WT  R   LG    P     
Sbjct: 74  DIGKRLGVE---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLGSVPTPFYRVG 130

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G   ++ K   I+    L G  +C   G++    L +             F+   E   A
Sbjct: 131 GTAAVL-KDSAITRWEDLKGQPVCTSQGSSYIKALTE------FGADIKAFKSSSESLLA 183

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R + C A   D + +  L   ND    +  +   ++ +P       G+T+  N +    
Sbjct: 184 LRGNNCVAAVHDATLINPLLAGNDEWKGYRAIAPELNPAPSVIWTRSGETDTQNRLDSIV 243

Query: 246 YAM 248
              
Sbjct: 244 QDW 246


>gi|301067874|ref|YP_003789897.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|300440281|gb|ADK20047.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 487

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 82/278 (29%), Gaps = 18/278 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +     G +     F     +  + G D+D  +A++     +  K++  PL       A
Sbjct: 32  AQKTYTIGTDVTFAPFEFANQDNKYVGIDLDLIKAIAK---TEGFKVEIKPLGFNAAVQA 88

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L++KQID +      T  R            Y  G    + KK  I S+  L G  + V+
Sbjct: 89  LEAKQIDGVIAGMSITPER--QQKFLMSDPYYKSGVVMAVAKKGTIKSLKDLRGKRVAVK 146

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT +          +      + F+    +          A   D   +   +   +  
Sbjct: 147 TGTDSADYANSIKDKYGFST--VTFDDSNNMYQDVITGNSAACFEDQPVM---QYGINNG 201

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263
               I+     +     A  + +       +           Y  +    LG       +
Sbjct: 202 MALKIIGKPAREGSYGFAASKNNRALITKFNAGLKKLRANGQYDKIIERYLGNGSAKSQK 261

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            +        + F G+ K++      GL +     ++ 
Sbjct: 262 TAAGNAQTTDRSFFGLLKANWGTLMSGLEETMVLTVVA 299


>gi|222106139|ref|YP_002546930.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737318|gb|ACM38214.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 256

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 36  LKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           ++ G+ N     F    A+G W+G+++D   A+ + +     K   + L+      AL +
Sbjct: 24  VRFGVMNESYPPFFAKDASGKWQGWEIDLMDAVCAEM---KEKCSIVELSWDGLIPALGA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ D++  +   T  R+    + F    Y      I  K     +S   + G +I +Q  
Sbjct: 81  KKFDVIWSSMSITDERKKV--IDFTDKYYNTPSRLIGAKDMKPGASADDVKGKTIGIQVS 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           T        YF           ++ ++E      A R D   GD
Sbjct: 139 TIQSEYYKKYFAK---VASEKTYQTLDEAFQDLAAGRIDYVFGD 179


>gi|50913614|ref|YP_059586.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS10394]
 gi|50902688|gb|AAT86403.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS10394]
          Length = 528

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 7   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 58

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 59  IEGTSQYANGYDVQVAKKIAKAMNKELLVVK---TSWTGLIPALTSGKIDMITAGMSPTK 115

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 116 ER--RNEISFSNSYYTSQPVLVVTANGKYAEATSLKDFSGAKVTAQQGVWHVNLLTQLKG 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 174 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 229

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 230 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 285


>gi|330963113|gb|EGH63373.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 263

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 85/258 (32%), Gaps = 17/258 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++ L L +        +AS L  I + G L          ++ ++ +G+ +G D+ 
Sbjct: 5   KHSVLTALLLGMAGVAQAQESASHLDKIVQTGQLAVCTTGDYKPYSLLREDGEHEGIDIT 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R+L+ ++    + +Q++P   K     + + + DI       +L R+     +     
Sbjct: 65  MARSLAKSLG---ATVQWVPTTWKTLLPDMVAGKCDIGMGGISVSLERQKKAFFSSTLDV 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                     ++    +V Q++  S+ +           + F   ++    + F   + I
Sbjct: 122 DGKIPLVRCEEQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPDASLAFHDNKTI 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  + D    D S     +          P+ ++   +       A  + + D  W
Sbjct: 179 FQELLDKKADVMITDASEALYQQKRMPGLCAVNPTHYMQYGEK------AYLLPRDDVTW 232

Query: 238 YNIVSWTHYAMVTAEELG 255
            + V    +      E  
Sbjct: 233 KSYVDQWLHLSKATGEYQ 250


>gi|309799781|ref|ZP_07693993.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
 gi|308116601|gb|EFO54065.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
          Length = 521

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 80/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +         A          +L+ G+      F             
Sbjct: 1   MKKLCLTILASLALTLGLVSQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   S      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLEDFSGAKIT-SQQGVYLYDLISQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +       P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAESANAKFKMIQPEPGFKTGEEDTS 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDDRISQI-----NASIETISKDEQVALMDRMIKEQP 265


>gi|307704003|ref|ZP_07640937.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
 gi|307622469|gb|EFO01472.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
          Length = 521

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 40/287 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MKKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+    +AF    Y      ++ K        S+   +GA I  Q G      +A    
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSTYANAKSLDDFNGAKITSQQGVYLYDLIAQIPG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  A   DAY  +       +  N +     + P   +   
Sbjct: 168 AKKET----AMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEE 223

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
              +A  + + D     I      A +           ++++ K+  
Sbjct: 224 DTAIAIGLRKDDNRISQI-----NASIETISKDDQVTLMDRMIKEQP 265


>gi|300173760|ref|YP_003772926.1| glutamine-binding protein/glutamine transport system permease
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299888139|emb|CBL92107.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 482

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 87/294 (29%), Gaps = 37/294 (12%)

Query: 1   MYK---DFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K      V +L L+    TS +   A     I          +     F     N  +
Sbjct: 1   MKKIVKSLIVGLLALMTFLVTSNNINAAQTPNYI-------ITTDATYPPFDFQDKNNQY 53

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D +  + ++             P++      ++ S Q D +      T  R+     
Sbjct: 54  TGIDQEILKTIAKR---QGFTYTLKPMSFNAATQSVSSGQADGVIAGMSITDERKAV--F 108

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y  G G+ + K+  I S+S L G ++ ++ GT+         K +  K     F
Sbjct: 109 DFGTPYYRSGIGWAVKKESNIKSLSDLKGQTVALKTGTSGADYALSVQKKYGFK--VTYF 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGD 234
              + +          A  GD+  +   +      ++  ++              + +G 
Sbjct: 167 NDSDTLYNDVINGNAQATFGDLPVI---QYAVKNGTQLKVMNSKSPIQAGWYGFGVQKGK 223

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
                      +A +                  T +  V ++LG   ++  G  
Sbjct: 224 NTQLLADFNRGFAEI--------------KKDGTYDKIVAKYLGASATTFTGSK 263


>gi|227511261|ref|ZP_03941310.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227085512|gb|EEI20824.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 271

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 74/253 (29%), Gaps = 20/253 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            +      +    +  T+  ++ S        ++K+   L  G+      ++  +  G  
Sbjct: 8   KRFVLTLGVVATGVLLTACGSSNSSSKGGYTSELKQSKQLTIGLEGTYAPYSYRQG-GKL 66

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF+VD  +A++  +        ++P         L S + D++  N   T  R+     
Sbjct: 67  TGFEVDLGKAVAKKMNLKA---NFVPTKWDSLIAGLGSSKYDVVLNNIAETPERKK--SY 121

Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F     +     I       I  +S + G  +    GT  E       +A  +    + 
Sbjct: 122 IFSTPYIYSRYALITKASDKSIQKLSDVKGKKLAEGTGTNNE------AQAKKLGAKIVP 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQG 233
                   A  R  R         A +A   +N                P  ++    Q 
Sbjct: 176 SGDFTTTLALIRQGRVQGTINAREAWFAYAKSNSTKGLTYHKVSDSQAEPVNISAMFNQK 235

Query: 234 DTEWYNIVSWTHY 246
           DT+     +    
Sbjct: 236 DTKIKAKFNKVLQ 248


>gi|322517586|ref|ZP_08070455.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322123846|gb|EFX95420.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 569

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 30/288 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K        L+++F    S  A          +L+ G+      F       +NG   
Sbjct: 55  MKKIIVACFAALLLVFGGVSSAQADE--------YLRVGMEAAYAPFNWTQDDDSNGAVP 106

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A    P  ++           AL S +I+++      T 
Sbjct: 107 IEGTKQYANGYDVQIAKKIAEAQGKKPLVVK---TAWTGLIPALTSGKINMIIAGMSPTA 163

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R     + F    Y      ++      ++   L              + L +      
Sbjct: 164 ER--RQEIDFSDSYYRSEPVMVVSSDGDYANAKTLKDFKDAKITAQQG-VYLYNLIDQIP 220

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI----LPDIISKS 224
                        +  A  +   D Y  +       +  + +     +            
Sbjct: 221 GVSKQTAMGDFGAMRQALASGIIDGYVSERPEAKTAEEASSKYKMITLKDGGFQVSDDDV 280

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
            LA  + +GD++    V+     +   E + +    I+    D T+  
Sbjct: 281 SLAVGLRKGDSQQMEQVNKVLAGISQEERVKLMDHIIDIQPADKTDEA 328


>gi|288906036|ref|YP_003431258.1| amino acid ABC transporter, substrate-binding protein
           [Streptococcus gallolyticus UCN34]
 gi|288732762|emb|CBI14336.1| putative amino acid ABC transporter, substrate-binding protein
           [Streptococcus gallolyticus UCN34]
          Length = 277

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 14/256 (5%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      +      F  + S+++S       +  +          F+  + +G+  G+
Sbjct: 1   MKKILGVTGVALASTTFLAACSSSSSSSSSSSGKEEVVFATVGTTAPFSY-EEDGELTGY 59

Query: 60  DVDFCRALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D++    ++ A+F D    ++ +        F  L S +  +   N  +T  R       
Sbjct: 60  DIE----VAKAVFKDSDKYEVTFKKTEWSSIFTGLDSGKYQMGGNNISYTEERSA--KYL 113

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F           ++     I+S   + G S  V  GTTT   L +Y + +      I + 
Sbjct: 114 FSYPIGSTPSVLVVPNDSDITSYDDIGGHSTQVVQGTTTAAQLEEYNEENADNTVDINYT 173

Query: 178 RVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
                +I       + D    D   + ++   N        +     + P       Q  
Sbjct: 174 NENITQILTNLNDGKYDFKIFDAPTVNSVI-KNQSLDNLKTIDLESEEQPYIYFIFGQDQ 232

Query: 235 TEWYNIVSWTHYAMVT 250
            +    V+     +  
Sbjct: 233 EDLQEFVNKRLKELQE 248


>gi|210630268|ref|ZP_03296358.1| hypothetical protein COLSTE_00242 [Collinsella stercoris DSM 13279]
 gi|210160594|gb|EEA91565.1| hypothetical protein COLSTE_00242 [Collinsella stercoris DSM 13279]
          Length = 336

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 84/229 (36%), Gaps = 9/229 (3%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67
           ++    +   +    ++    IK  G ++ G+    + F+ +   +G  +GFD    + L
Sbjct: 71  LIASGAVADDATIAASTWAQKIKDAGTMRLGVVQTSMLFSLLNEKDGKLRGFDAGLSQLL 130

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              I  D SK +   + +  R   LQ+ Q+D +      T  R+  +  A  P       
Sbjct: 131 VRYILGDESKFESTQVTSDTRESVLQNDQVDAVFATYSITEDRKKLISFA-GPYYSTQQS 189

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             ++     I  +  L+G ++  Q+G+T    + +             F+  EE  +A  
Sbjct: 190 ILVLADNDSIEGLEDLAGKNVAAQSGSTGPSIMEELCP----DAKLQEFKTDEEARSALA 245

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235
             R DAY  D + L++      +P ++ +  +           +     
Sbjct: 246 QKRVDAYVIDRNMLFSD--MMKQPGKYKMAGEPFGPEDLYGIGMPLDSD 292


>gi|330428154|gb|AEC19488.1| cyclohexadienyl dehydratase [Pusillimonas sp. T7-7]
          Length = 257

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F +     + +   + +     L  +     ++ G       FA     G ++G D
Sbjct: 1   MRHFFRLFASVAMAMTLGAAAQAGPRLDRVMDSKTIRVGTPGDYRPFAIKTDKG-YEGHD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +      IQY+  +  +    LQ+ + D+        + R   + +   P
Sbjct: 60  IDVVEAMAKVLGVK---IQYVETSWPKLMKDLQADKFDVAVGGITRNVARIKQVEML--P 114

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVF 176
                G+  ++ K       +V  L+  S+ V      T E  + +  K           
Sbjct: 115 GYAPFGKVALVRKDQASKYKTVDDLNQPSVRVIKNPGGTNEAFVLENLKQAK----VSTH 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E+  EI A     + D    +         T+ R +   +   +  ++ L   +   D +
Sbjct: 171 EKNAEIPALIAEGKGDVMITETYEALHYSKTDPRLAALFVDKPLTPENQLGFMLPVDDAD 230

Query: 237 WYNIVSWTHYAMVTAE 252
           +  ++ +    +   E
Sbjct: 231 YVRVMKFAWDLLDDRE 246


>gi|187922066|ref|YP_001893708.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187713260|gb|ACD14484.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 262

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 81/224 (36%), Gaps = 14/224 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NG+ +G D+D   A+  A        +++  +      ALQ 
Sbjct: 28  TLRFGLEAQYPPFESKGPNGELQGLDIDVGNAVCVAA---HMTCKWVETSFDGLIPALQG 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I  +  G + + + L G  + V   
Sbjct: 85  RKFDAINSAMNATDAR--RQAIDFTTVVYRVPTQLIAKRDSGLLPTPASLKGKRVGVLQA 142

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++++       + ++   ++     A R DA      A     L+      
Sbjct: 143 SIQETYAKAHWESAG--VTVVPYQDQNQVYTDLVAGRLDATLVLAPAGQTGFLSKPSGEG 200

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +  + + +         +A  I +GDT   + ++    A V A+
Sbjct: 201 YAFVGEPVRDDKILGSGIAYGIRKGDTALRDRLNAAI-AKVQAD 243


>gi|206576282|ref|YP_002237013.1| prephenate dehydratase/arogenate dehydratase [Klebsiella pneumoniae
           342]
 gi|290510956|ref|ZP_06550325.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
 gi|206565340|gb|ACI07116.1| prephenate dehydratase/arogenate dehydratase [Klebsiella pneumoniae
           342]
 gi|289775949|gb|EFD83948.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 253

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 76/253 (30%), Gaps = 18/253 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +++   + L   +    A  +  I+  G LK G+       A   A G+ +G+D
Sbjct: 1   MK----LTVGLALTLAIMTCGAQARDMQTIEHSGELKVGVPGDYAPLAFRNAAGELQGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R L   +     K+ ++  +       L++ + DI       T  R     L+   
Sbjct: 57  VDMARDLGRTLG---LKVSFVYTSWPALAADLRADKFDIAMGGVTQTPARAKDFALSHPV 113

Query: 121 ITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +               + S+         + V  G T +  + ++ K        I  + 
Sbjct: 114 VANGKIALANCQAAPRLGSLAKIDRPEVKVVVNPGGTNQSFVDEHIKQA----QIIRVQN 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDT 235
             +   A R    D    D   +      +  P         P   + S     + + + 
Sbjct: 170 NVDNLEALRQKTADMMVTD--LIEGDYYQSKEPGVFCVANETPFAGTASDKVYMMNKDNP 227

Query: 236 EWYNIVSWTHYAM 248
                V+    + 
Sbjct: 228 ALLEKVNQWLDSQ 240


>gi|313122913|ref|YP_004033172.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312279476|gb|ADQ60195.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 527

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 108/331 (32%), Gaps = 59/331 (17%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55
           M K   +  +++  ++    + S +       +  G LK G+      +   +   ANG 
Sbjct: 1   MKKHSSWISALMAAVMTLVLAVSWSQPA----QASGTLKIGMEANYAPYNWTQTTSANGA 56

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            K         G+DV   + ++  +      +            AL S +ID++      
Sbjct: 57  VKIDGTSSYANGYDVKIAKIIAKKLGKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSP 113

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLADY 163
           T  R     + F           I++K+   +    L    GA +  Q GT     +   
Sbjct: 114 TAERRK--AINFTSPYRTTNFVVIVNKQSKYAKAKYLTNFKGAKLTAQQGTLHYDLIKQL 171

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A          +    +  +  A   D Y  + + L + ++ +        S+     
Sbjct: 172 PGAKREPAS----KDFAAMRESLEAGTIDGYVAEDTELTSFQMMDSNITGVNLSKMKGFK 227

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
              S + ++  + +G+ +    V+     + T+E   + ++ + Q  + +T  +      
Sbjct: 228 VSSSDAEVSIGVKKGNDQLLRQVNKVLAGISTSERNKLMKEAVQQQPQTSTKKE------ 281

Query: 279 IDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
                          +W   +++   NYG+M
Sbjct: 282 ---------------NWLVSMLK---NYGQM 294


>gi|227534278|ref|ZP_03964327.1| collagen binding protein [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227188070|gb|EEI68137.1| collagen binding protein [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 270

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 23/220 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK----------RGFLKCGINTGLVGFAEV 50
           M K     +L ++ L     +  +S   D  K          +  L  G+      F+  
Sbjct: 1   MLKKKLWVLLPIVALSAFVLAACSSSKADSSKTSTVTSELINKNELTIGLEGTYAPFSYR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G  +GF+VD  +AL+  +       +++P         L S++ D++  N   T  R
Sbjct: 61  -KDGKLQGFEVDLGKALAKKVGVKA---KFVPTQWDSLIAGLGSQKFDLVLNNISETPQR 116

Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
              +   F     +     I       I  ++ + G +     GT           A   
Sbjct: 117 --KIVYNFTTPYMYSRYALITRSDETPIKGLNDIKGKTFVEGTGTPNAAL------AKKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             +              + +R D      +A YA   +N 
Sbjct: 169 GANITPSGDFTVSLNLVKENRADGTINATAAWYAYAKSNS 208


>gi|254253816|ref|ZP_04947133.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124898461|gb|EAY70304.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 323

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 10/204 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G +T  + F   + +  + GFD+D    ++             P++      A
Sbjct: 97  DTKTLVVGTDTSFMPFEFKQGD-KYVGFDLDLWAEIARDQGWKY---TIQPMDFAGLIPA 152

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ++ ID+          R  ++  +  P         +      I S+  L+G  I  +
Sbjct: 153 LQTQNIDVALSGMTIREERRKAIDFS-APYYDSGLAAMVQVGNTTIKSIDDLNGKVIAAK 211

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT T   +  + K          F  +++   A  A R DA   D   +          
Sbjct: 212 TGTATIDWINAHLKPK----EIRQFPNIDQAYLALEAGRVDAAMHDTPNVLFFVNNAGNG 267

Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235
               +    ++         +G  
Sbjct: 268 KV-KVAGQPVTGDRYGIGFPKGSP 290


>gi|71910050|ref|YP_281600.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS5005]
 gi|71852832|gb|AAZ50855.1| ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS5005]
          Length = 522

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 110 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 224 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 279


>gi|19745436|ref|NP_606572.1| ABC transporter substrate-binding protein [Streptococcus pyogenes
           MGAS8232]
 gi|19747549|gb|AAL97071.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 280

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 75/250 (30%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKANGDW 56
           M K  ++    + +      +   S              +          F+  +  G  
Sbjct: 1   MVKKQYLGRATIALASTLVLAACGSSKKAESGNQGSSKEVLFATVGTTAPFSY-EKGGQL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D++  +A+      D  K+ +        F  L S +  +   N  +T  R      
Sbjct: 60  TGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA--KY 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F           ++ K   I S   + G +  V  GTT+   L D+ K H+     + F
Sbjct: 116 LFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTLKF 175

Query: 177 ERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQG 233
                 ++       + D    D   + A  + N        +    ++ P +     Q 
Sbjct: 176 TNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFSQD 234

Query: 234 DTEWYNIVSW 243
             +  + V+ 
Sbjct: 235 QEKLQSFVNK 244


>gi|168485585|ref|ZP_02710093.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|183571168|gb|EDT91696.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
          Length = 521

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIT 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|300811497|ref|ZP_07091991.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497570|gb|EFK32598.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 527

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 109/331 (32%), Gaps = 59/331 (17%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55
           M K   +  +++  ++    + S +       +  G LK G+      +   +   ANG 
Sbjct: 1   MKKHSSWISALMAAVMTLVLAVSWSQPA----QASGTLKIGMEANYAPYNWTQTTSANGA 56

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            K         G+DV   + ++  +      +            AL S +ID++      
Sbjct: 57  VKIDGTSSYANGYDVKIAKIIAKKLGKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSP 113

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLADY 163
           T  R     + F           I++K+   +    L    GA +  Q GT     +   
Sbjct: 114 TAERRK--AINFTSPYRTTNFVVIVNKQSKYAKAKYLTNFKGAKLTAQQGTLHYDLIKQL 171

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A          +    +  +  A   D Y  + + L + ++ +        S+     
Sbjct: 172 PGAKREPAS----KDFAAMRESLEAGTIDGYVAEDTELTSFQMMDSNITGVNLSKMKGFK 227

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
              S + ++  + +G+ +  + V+     + T+E   + ++ + Q  + +T  +      
Sbjct: 228 VSSSDAEVSIGVKKGNDQLLSQVNKVLAGISTSERNKLMKEAVQQQPQTSTKKE------ 281

Query: 279 IDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
                          +W   +++   NYG+M
Sbjct: 282 ---------------NWLVSMLK---NYGQM 294


>gi|325528740|gb|EGD05807.1| polar amino acid transport system substrate-binding protein
           [Burkholderia sp. TJI49]
          Length = 260

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++  ++           +G   GF +D   AL + +    ++  ++  +       L 
Sbjct: 25  KEIRLAVDPTYPPLEYKLPDGTLTGFGIDITNALCAEL---RARCVWVESSFDGMIPGLL 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
           +++ D+++ +   T  R  +  +AF           I  K   +   +  L G  I V+ 
Sbjct: 82  ARKFDVIASSMTITPKR--AQQIAFTNRISNAPARLIARKGSPLLPTADALKGKRIGVEQ 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+         ++        + ++  +++ A     R DA      A     L   +  
Sbjct: 140 GSAQADYAIANWQPAG--AQIVSYQNQDQVYADLVTGRLDAAFQASIAASDGFLKKPQGK 197

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
           +   +   I             + + D +     +    A + A
Sbjct: 198 DFAFVGAPIDDIKYFGQGDGLGLRKQDADLREAFNRAL-ATILA 240


>gi|305432158|ref|ZP_07401324.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter coli JV20]
 gi|304444823|gb|EFM37470.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Campylobacter coli JV20]
          Length = 256

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +GD    
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRRGDEALK 216

Query: 239 NIVSW 243
           + +  
Sbjct: 217 DKLDN 221


>gi|291618918|ref|YP_003521660.1| PheC [Pantoea ananatis LMG 20103]
 gi|291153948|gb|ADD78532.1| PheC [Pantoea ananatis LMG 20103]
 gi|327395268|dbj|BAK12690.1| cyclohexadienyl dehydratase precursor PheC [Pantoea ananatis
           AJ13355]
          Length = 270

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 72/257 (28%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++     L     +   S L  +     LK         ++ +K +G ++G D
Sbjct: 16  MKKTLVITL-----LLVAGGAQAQSRLDSVLNTKTLKVCTTGDYKPYSFLKPDGSYEGLD 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAF 118
           +    +L++++    +K+Q++P   K       +KQ DI       TL R+         
Sbjct: 71  ISMAESLAASLG---AKVQWVPTTWKTLMQDFIAKQCDIALGGVSVTLKRQQTAWFAQPL 127

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K             +   AG T E  +  +           +F  
Sbjct: 128 GVDGKIPLVRCADKAKYQTVEQMNQPSVRLVEPAGGTNEAFVHSHLPQA----ALTLFHD 183

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I      ++ D    D S     +              +      A  I + D  W 
Sbjct: 184 NVTIFQQLVDNKADVMITDASEALYQQKRFPSLCALNPDKPLQYGE-KAYMIPRDDMSWK 242

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +      E  
Sbjct: 243 QYVDQWLHLSTATGEYA 259


>gi|237739678|ref|ZP_04570159.1| amino acid-binding protein [Fusobacterium sp. 2_1_31]
 gi|229423286|gb|EEO38333.1| amino acid-binding protein [Fusobacterium sp. 2_1_31]
          Length = 235

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 79/256 (30%), Gaps = 30/256 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       ++ +                   K   +  G N     F  +       GFD
Sbjct: 1   MLMSLLSIVISVSAFA---------------KNKVVYVGTNAEFAPFEYL-EKNKVVGFD 44

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+S        + +   +       ALQ+K++D++      T  R+    +AF  
Sbjct: 45  VDLLDAISKETG---LEFKVQDMAFDGLLPALQTKKVDMVIAGMSATPERKK--AVAFSK 99

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +   Q  I       + S   LSG  + V  G T +  +++             F   
Sbjct: 100 PYFKAKQVVITKGVDKSLKSFKDLSGKKVGVMLGFTGDTVVSEI-----KGVKVERFNAS 154

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ DA   D     A K T +   + VI      +   A A+ + D E  +
Sbjct: 155 YAAIMALSQNKVDAVVLDSE--PAKKYTANN-KQFVIASIPAEEEDYAIAVRKNDKELLD 211

Query: 240 IVSWTHYAMVTAEELG 255
            ++     +    E  
Sbjct: 212 KINAALDKIKANGEYD 227


>gi|225026712|ref|ZP_03715904.1| hypothetical protein EUBHAL_00964 [Eubacterium hallii DSM 3353]
 gi|224955973|gb|EEG37182.1| hypothetical protein EUBHAL_00964 [Eubacterium hallii DSM 3353]
          Length = 271

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 91/287 (31%), Gaps = 21/287 (7%)

Query: 1   MY-KDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M  K     IL   IL  T +   N        ++  +  G +     +  +  +G+  G
Sbjct: 1   MKGKRVIAGILLAGILAVTLAGCKNTDNTKKETEKPVITLG-SDNYPPYNYLNEDGEPTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+        +     ++  + +N +++   ++  +ID +                 +
Sbjct: 60  IDVELATEAFKRMGY---QVDVVQINWEKKKELVERGEIDCIMGCFSM---EGRLDDYRW 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFE 177
                   Q   ++K   I  +S L G ++ VQ+ T  E            K  + I   
Sbjct: 114 AGPYIASRQVVAVNKSSDIYKLSDLEGKNLAVQSTTKPEGIFLKRTDERIPKLGNLISLG 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E I         DA      ++       D      IL + +  + +  A  + D   
Sbjct: 174 HRELIYTFLGKGYVDAVAAHEESVVQYMKDYDAS--FRILEEPLMLTGIGVAFAKNDDRG 231

Query: 238 Y-NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
               +  T       EE+     ++  V K   +P+  ++L +D   
Sbjct: 232 ICEQMEQTL------EEMRQDGTSLKIVEKYLDDPE--KYLEVDDLG 270


>gi|303328126|ref|ZP_07358565.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio sp. 3_1_syn3]
 gi|302861952|gb|EFL84887.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio sp. 3_1_syn3]
          Length = 247

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 10/207 (4%)

Query: 39  GINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           GI+     FA +    G   GFDVD    ++  +  +   I + P+       AL +KQI
Sbjct: 28  GIDPNYPPFAYMDEKTGQAAGFDVDSLNWIAKTMGVE---ITHKPMAWDGIIPALLAKQI 84

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTT 156
           D++      T  R   +   F    +   + F++     ++    L     + VQ GT+ 
Sbjct: 85  DMVGSGMSITPERSKMVQ--FSDPYWTVSRVFLVPADSKLTPEDILSQKIKLGVQRGTSE 142

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              +    +     +    +E            R  A   D                   
Sbjct: 143 ANAIKQEQQEKGYPFELRFYESAPLAVEDLLNGRIQAALMDELPADDAITK---GRAVKK 199

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSW 243
                       A+ + D E   ++  
Sbjct: 200 AGTHGKPDGFGVALRKDDKELRALIDE 226


>gi|253751184|ref|YP_003024325.1| extracellular solute-binding protein [Streptococcus suis SC84]
 gi|253753085|ref|YP_003026225.1| extracellular solute-binding protein [Streptococcus suis P1/7]
 gi|253754907|ref|YP_003028047.1| extracellular solute-binding protein [Streptococcus suis BM407]
 gi|251815473|emb|CAZ51051.1| extracellular solute-binding protein [Streptococcus suis SC84]
 gi|251817371|emb|CAZ55107.1| extracellular solute-binding protein [Streptococcus suis BM407]
 gi|251819330|emb|CAR44692.1| extracellular solute-binding protein [Streptococcus suis P1/7]
 gi|319757453|gb|ADV69395.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           JS14]
          Length = 291

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 77/262 (29%), Gaps = 20/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K    S L +  L   + S             +    I++ G LK      L   +  
Sbjct: 1   MLKKVLASALLVSTLTLAACSSSSSNTSSSSAEQTQWEKIQEAGVLKVATPGTLFPTSYY 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  G+++D    +   +     +I+Y  +   E F A+ S ++DI   N D T  R
Sbjct: 61  NDAKELVGYEIDMINEIGKRL---KLEIEYQEIGVAEAFTAVDSGKVDISVNNFDMTEAR 117

Query: 111 EISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +   G  +          + LS  +     G      +    +    
Sbjct: 118 KE--KYNFSIPYKYSVGGYIVREDGSSGIEAADLSDWTGKKAGGGAGTQYMK-IAEKQGA 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSP--L 226
           +         +         R D    D  + + A+K  N    +  +       +P   
Sbjct: 175 EPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVMAIKWANANFPDIKVKMGEAKYNPTEQ 234

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
              + + DT     +     AM
Sbjct: 235 GIVMSKADTSLKEKIDEALEAM 256


>gi|149012202|ref|ZP_01833311.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|147763804|gb|EDK70738.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
          Length = 521

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 84/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + DT    I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDTRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|104774800|ref|YP_619780.1| glutamine ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423881|emb|CAI98922.1| Glutamine ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 486

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 84/226 (37%), Gaps = 14/226 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKG----FDVDFCRALSSAIFDDPSKIQYLPL 83
                +     G +     F     +G + G     D++  R ++     +  K +   +
Sbjct: 29  AQAASKKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIEILREIAK---HENFKYELKIM 85

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +      ALQS QID +      T  R+ +  + F    Y DG    + +   I+S+  L
Sbjct: 86  SFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSYYTDGVCLAVAEDSKITSMKDL 143

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V+ GTT+ +      K +  K     +       A  +A   DA   D     +
Sbjct: 144 KGKTVNVKTGTTSAIYAKSIQKKYGFK--LKYYTNSNTSWADVKAGNADACFDDGP---S 198

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           L+      +   I+   +S +PLA A+ +G+ +    +     A +
Sbjct: 199 LRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMFNDGLAWL 244


>gi|307246582|ref|ZP_07528653.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306852454|gb|EFM84688.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 260

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 78/247 (31%), Gaps = 13/247 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   V  +  I L  ++ S     L   I  +G +  G       F    A+G   G+
Sbjct: 1   MLKKLSVIAVSAIALATSAASLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  RA++  +      + +           L++ + D+++     T   E        
Sbjct: 61  DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               + G   ++   +  I   S +      V+   T      +  +A+      +  + 
Sbjct: 117 AAYSWSGAALVVRNDEEKIKQASDVKD----VKTAQTLSSNYGELVRANGAD--IVPIDG 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +     +  R DA   D  AL      N +    ++               +G+ E  
Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPKSGLKIVWESPEKADA-GFIANKGNQEAL 229

Query: 239 NIVSWTH 245
           N +S   
Sbjct: 230 NKISAAI 236


>gi|182418749|ref|ZP_02950022.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum 5521]
 gi|237669680|ref|ZP_04529657.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377443|gb|EDT74999.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum 5521]
 gi|237654754|gb|EEP52317.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 265

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 74/245 (30%), Gaps = 18/245 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK--------RGFLKCGINTGLVGFAEVKA 52
           M K   +  +  ++L    F+       DI +        +       ++    F+  + 
Sbjct: 1   MKKGRLLLAIMSLMLLTVLFTACGKNTKDINENTTSNDETKPKYIIACDSNFPPFSF-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG + G DV+   ++S     D       P++       L    ID        T  R+ 
Sbjct: 60  NGTYTGIDVELLESISKKEDFDYE---LKPMDFGSIISGLSDGTIDGAMGAISITDERKE 116

Query: 113 SLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              L F    +  G    + H    IS    L G ++ V+ GT       D         
Sbjct: 117 I--LDFSEEYFESGLSMGVKHDDTSISKFEDLQGKNVAVKKGTAGSEFAEDN--KEKYSL 172

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           +   F+  + +         DA   D   +         P+   I  D +       A+ 
Sbjct: 173 NLKYFDNSQSMFLDVEEGSSDAVIEDHPIIAYEVKKAT-PANLKIAGDKLKTFNYGFAVN 231

Query: 232 QGDTE 236
           +G  +
Sbjct: 232 KGKNQ 236


>gi|317048221|ref|YP_004115869.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316949838|gb|ADU69313.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 259

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 83/252 (32%), Gaps = 24/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++   + +  ++ +              L+ G+ +    F    A G+ +GFD
Sbjct: 1   MKK--LNALFIALGMLTSAHALAQET---------LRYGLESQYPPFESRNAQGELEGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
           ++  +A+         K  ++  +      ALQ+K+ D ++   + T  R     + F  
Sbjct: 50  IELGKAICQ---TGNFKCSWVESSFDALIPALQAKKFDAINSAMNITEARAK--SIDFTK 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           PI            +  + +   L G +I V  G+  E     ++++         ++  
Sbjct: 105 PIYRIPTMLVAKEGQGLLPTAESLKGKNIGVLQGSIQETYAKKHWESQG--VTVTSYQDQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            ++     A R D      +A  +  L   +      +   +         +   + +GD
Sbjct: 163 NQVYNDMVAGRLDGTLVMSAAGQSGFLDKPQGKGFAFVGKPVEDDTILGSGIGFGLRKGD 222

Query: 235 TEWYNIVSWTHY 246
            +    +     
Sbjct: 223 AKLKQELDAAIT 234


>gi|94989745|ref|YP_597845.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|94543253|gb|ABF33301.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10270]
          Length = 528

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 7   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 58

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 59  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 115

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 116 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 174 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKTITLKKGFAVAES 229

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 230 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 285


>gi|322688638|ref|YP_004208372.1| ABC transporter substrate-binding protein [Bifidobacterium longum
           subsp. infantis 157F]
 gi|320459974|dbj|BAJ70594.1| putative ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis 157F]
          Length = 317

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGTDTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                   ++   ++  A  + + D +  D     
Sbjct: 184 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSYKLQTDVTTAVASGKADIFYADTP--V 241

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 242 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 285


>gi|325979005|ref|YP_004288721.1| polar amino acid transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178933|emb|CBZ48977.1| polar amino acid transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 280

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 14/256 (5%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      +      F  + S+++S       +  +          F+  + +G+  G+
Sbjct: 4   MKKILGVTGVALASTTFLAACSSSSSSSSSSSGKEEVVFATVGTTAPFSY-EEDGELTGY 62

Query: 60  DVDFCRALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D++    ++ A+F D    ++ +        F  L S +  +   N  +T  R       
Sbjct: 63  DIE----VAKAVFKDSDKYEVTFKKTEWSSIFTGLDSGKYQMGGNNISYTEERSA--KYL 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F           ++     I+S   + G S  V  GTTT   L +Y + +      I + 
Sbjct: 117 FSYPIGSTPSVLVVPNDSDITSYDDIGGHSTQVVQGTTTAAQLEEYNEENADNTVDINYT 176

Query: 178 RVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
                +I       + D    D   + ++   N        +     + P       Q  
Sbjct: 177 NENITQILTNLNDGKYDFKIFDAPTVNSVI-KNQSLDNLKTIDLESEEQPYIYFIFGQDQ 235

Query: 235 TEWYNIVSWTHYAMVT 250
            +    V+     +  
Sbjct: 236 EDLQEFVNKRLKELQE 251


>gi|325578844|ref|ZP_08148891.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325159668|gb|EGC71800.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 239

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +     +L  ++F+ NA           +   +      F      G+  GFD
Sbjct: 1   MKKLLLSA-----MLMGSAFAANAQ---------EITFAMEPSYPPFETTNEKGEIVGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +   +      +L++K+ D      D T  R     ++F  
Sbjct: 47  VDVANAICKEI---QATCHFKSQSFDALIPSLKAKRFDAAISAMDITEARAK--QVSFSN 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K   + +     +I VQ GTT +   A   K +N K     +  ++
Sbjct: 102 AYYDSTASYVALKGKADLASA----KTIGVQNGTTFQQYTAAETKQYNAK----SYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       +     +       + L  A+ +   E  
Sbjct: 154 DAILDLKNGRIDIIFGDTAVLSDMISKEPEIQFVGEKVTNKKYFGNGLGIAVNKSSKELL 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     +    E  
Sbjct: 214 ESLNKGLETVKANGEYQ 230


>gi|260461918|ref|ZP_05810163.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259032165|gb|EEW33431.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 282

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 79/244 (32%), Gaps = 23/244 (9%)

Query: 4   DFFVSILCLIILFFTSFSTNA----SILGDIKKR---------GFLKCGINTGLVGFAEV 50
            F V    LI +   + +  A     +L D K+R           L+    T    F  +
Sbjct: 6   RFLVLASMLIAVLPLAGARAAEPQVPVLWDAKERLPKPDLSALPRLRFLTTTDFPPFNFL 65

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            ++G   GF +D  RA+ + +     K Q   L   E   AL+  + + +      T   
Sbjct: 66  DSSGKLSGFHIDLARAICAELGI-VDKCQIQALPWTELEGALEKGEGEAIIAGIAATPQ- 123

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHN 168
                 AF          FIM K K +       L G  + V +G+  E  L DYF    
Sbjct: 124 -SRQTYAFSRSYLQFPARFIMPKGKALLEPIFDKLRGKRVGVISGSAHERMLRDYF---- 178

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLA 227
                + F+  E + +  +A + DA  GD          +D                 L 
Sbjct: 179 STVQVVTFDGPEALYSDLKAGKIDAAFGDGMRFAFWLGGSDAAGCCRFAGGPYLAPEYLG 238

Query: 228 PAII 231
             + 
Sbjct: 239 TGMA 242


>gi|92114718|ref|YP_574646.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91797808|gb|ABE59947.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 252

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 81/227 (35%), Gaps = 20/227 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
            L  + L   + + +A           L+ G++ G   F  V+ + + KGF+VD   A+ 
Sbjct: 10  ALTGLALSAFAATAHADT---------LRVGMSGGYYPFTFVEQD-ELKGFEVDVMNAVG 59

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                   +I+++  +       L S +ID ++     T  R+         +     Q 
Sbjct: 60  EQTG---DEIEFVTASFSGLAGMLDSGRIDTIANQITITPERQAKYAFTQPYVY-DGAQV 115

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +      I  V  L G ++ V  G+  E  L +   A   +     ++   E D A   
Sbjct: 116 VVREGNDAIQGVEDLKGKTVAVNLGSNYEQLLRELPYA--DEIDIKTYDSNIEQDVAL-- 171

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            R DA+  D  +  A ++  D+P    +     S+   A      + 
Sbjct: 172 GRADAFVMDRVS--ATQVIKDKPLPLQLAGKPFSRIENALPFRDNED 216


>gi|306825868|ref|ZP_07459207.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432229|gb|EFM35206.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 522

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +    +    A          +L+ G+      F             
Sbjct: 1   MKKLCLSILASLALTLGLASQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   S      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLEDFSGAKIT-SQQGVYLYDLISQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GVKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+    I      A +           ++++ ++  
Sbjct: 227 IAIGLRKDDSRISQI-----NASIETISKDEQVALMDRMIQEQP 265


>gi|261867467|ref|YP_003255389.1| arginine-binding periplasmic protein 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412799|gb|ACX82170.1| arginine-binding periplasmic protein 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 239

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 78/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I     L  ++   NA           L   +      F      G+  GFD
Sbjct: 1   MKKLLLSAI-----LLGSAVVANAQD---------LTFAMEPSYPPFEFTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +           L+SK+ D      D T  R     + F  
Sbjct: 47  VDIANAICKEI---QATCHFKGEAFDSLITNLRSKRFDAAISAMDITEARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     ++ VQ GTT +       K    +Y P  +  ++
Sbjct: 102 PYYDSTASYVALKGKATLDSA----KNVGVQNGTTFQQYTVAETK----QYAPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       +     +       + L  A+ + +    
Sbjct: 154 DAILDLKNGRIDIIFGDTAVLADMISKEAEIQFVGDKVTNKKYFGNGLGIAMNKSNKVLT 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 ESLNKVLAAIKANGEYQ 230


>gi|194016299|ref|ZP_03054913.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
 gi|194011772|gb|EDW21340.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
          Length = 295

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 83/259 (32%), Gaps = 27/259 (10%)

Query: 2   YKDFFV-SILCLIILFFTSFSTNA---------SILGD--IKKRGFLKCGINTGLVGFAE 49
            + F+V ++  + +L  +S   N          S      I + G      +     F+ 
Sbjct: 29  KRRFWVPALFSVAVLLLSSCGANETNGNGDKRNSTAKGSPILEDGKFIFAASGEFHPFSY 88

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           +  N    GFD+D   A+S  +  +P + +Y           ++S + D    +      
Sbjct: 89  MDGN-QMSGFDIDVGNAISDKLGLEPIQKKYK---FAGIVEGVKSGKFDAAVASHTINEE 144

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+  + L      Y+ G          I     L G  I V  G++      ++      
Sbjct: 145 RKKHVLL--SKPYYYSGPQIFTRPGADIQHADDLKGKEIAVSKGSSYADIAKEH-----S 197

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
              P  ++       A    + +A   D +          +    +   + + +S  A A
Sbjct: 198 GQEPKYYDSDVVALEALANGKHNAVVTDFATGA----EAMKKKLKIEAQERLGQSEQAIA 253

Query: 230 IIQGDTEWYNIVSWTHYAM 248
           + + + +    ++    A+
Sbjct: 254 VSKENEQLIKEINDAIDAL 272


>gi|330821516|ref|YP_004350378.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
 gi|327373511|gb|AEA64866.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
          Length = 282

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 80/251 (31%), Gaps = 16/251 (6%)

Query: 3   KDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           +  F+++     L   + S        L DI+KRG L  G       F  V  NG   G+
Sbjct: 6   RRQFLALTGSATLALAAPSIAFAEGGTLADIRKRGVLTVGTEAAYEPFEFV-ENGKVTGY 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    ++  +    +++    L  +     L + + D ++ +      R       F 
Sbjct: 65  GHDILEYMAGKLGVKLNQMN---LPFQGLLPGLMTHKFDFVATSVGINPERARRFA--FS 119

Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY-HPI 174
                     ++      I       G  +  Q G++++     +    KA    Y    
Sbjct: 120 QPVGVVDTVLVVRAGDTAIGKPEDAGGKIVGTQMGSSSQPIAQAFDTQLKAKGAGYADIK 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +F+   ++  A +    D      + +  L      P +  ++  I     LA      D
Sbjct: 180 LFQAYPDVMVALQNKTLDIGIMPSNIVAVL--MKKEPGQFRVVGKIGEPKMLAWVANPQD 237

Query: 235 TEWYNIVSWTH 245
            E  + ++ + 
Sbjct: 238 KEIRDFINASL 248


>gi|116617559|ref|YP_817930.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096406|gb|ABJ61557.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 481

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 87/289 (30%), Gaps = 27/289 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M+K  F+  + L++   +           I           +     F     N D+ G 
Sbjct: 1   MFKKGFILAVTLVVALLSFSLAA----DCIHADKPHYTISTDATYPPFDFQDKNNDYIGI 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D  + ++     +       P++       + + Q D +      T  R+        
Sbjct: 57  DQDILKEIAKR---ENFTYTLKPMSFTSAAQLVANGQADGIIAGMAITDERKEV--YDNS 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y  G  +I+ K   I S+  L G ++ ++ GT          + +    +   F   
Sbjct: 112 TPYYKTGVAWIVKKGSEIKSLKDLKGKTVALKTGTAASEYGKSLQRKYGF--NIKYFNDT 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + +          A   D+  +    + N    + +   +  +       + +G+ +   
Sbjct: 170 DTMYNDVVVGNSAATFEDMPVIQ-YAIKNGVKLKVMNANNPGNAGSYGFFVKKGENKELL 228

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
                 +A +                  T +  ++++LG  +S+  G  
Sbjct: 229 ASFNRGFASI--------------KKDGTYDKIIKKYLGATQSTFTGSK 263


>gi|307711086|ref|ZP_07647508.1| L-cystine-binding protein tcyA [Streptococcus mitis SK321]
 gi|307617048|gb|EFN96226.1| L-cystine-binding protein tcyA [Streptococcus mitis SK321]
          Length = 276

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 14/254 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAASKKEIIVATNGSPKPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYHMAVNNLSYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S++ + G S  +   TT+   L +Y K H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLADIGGKSTEIVQATTSAKQLEEYNKQHADNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSWTHY 246
           G  E  + V     
Sbjct: 235 GQDELKSFVDKRIQ 248


>gi|225858303|ref|YP_002739813.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|225720142|gb|ACO15996.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
          Length = 521

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIT 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|195978273|ref|YP_002123517.1| putative ABC transporter cystine-binding lipoprotein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974978|gb|ACG62504.1| putative ABC transporter cystine-binding lipoprotein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 294

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 82/274 (29%), Gaps = 18/274 (6%)

Query: 1   MYKDFFVSILCLI----------ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K+F +     +              +  S   +    IK +G LK          +  
Sbjct: 1   MKKEFLMKKGVALLSISLMSLLLAACASQPSAQKTSWEKIKDKGVLKVATPATYQPTSYY 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  G++VD  + +   +     K++++     + F ++ S ++D+   N D T  R
Sbjct: 61  NDANELVGYEVDLMKEIGKRL---DLKVKFIETGYDQAFTSVDSGRVDVSLNNFDITAKR 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +    ++        G   +        S + LS       AG +    +    K    +
Sbjct: 118 QKKYNISTPYKYGVGGM-IVRADGSSGISKADLSDWKGKKAAGASGTEYMK-VAKKQGAE 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDI-ISKSPLA 227
                    +         R D    D  A   +   + +  P+ +V + D+  + +   
Sbjct: 176 LVTYDNVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMKSQNPNLNVKMSDVLYNPTAQG 235

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
             + + D      +      M     L    K  
Sbjct: 236 IIMSKKDDTLKKKIDAVIKDMKQDGSLKTISKTY 269


>gi|191637480|ref|YP_001986646.1| Collagen binding protein [Lactobacillus casei BL23]
 gi|239629528|ref|ZP_04672559.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|190711782|emb|CAQ65788.1| Collagen binding protein [Lactobacillus casei BL23]
 gi|239528214|gb|EEQ67215.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|327381525|gb|AEA53001.1| Extracellular solute-binding protein family 3 [Lactobacillus casei
           LC2W]
 gi|327384688|gb|AEA56162.1| Extracellular solute-binding protein family 3 [Lactobacillus casei
           BD-II]
          Length = 270

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 23/220 (10%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K      + I+ L     T+ S++       +++  ++  +  L  G+      F+  
Sbjct: 1   MLKKKLWVLLPIVALSAFVLTACSSSKADSSKTSTVTSELINKNELTIGLEGTYAPFSYR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G  +GF+VD  +AL+  +       +++P         L S++ D++  N   T  R
Sbjct: 61  -KDGKLQGFEVDLGKALAKKVGVKA---KFVPTQWDSLIAGLGSQKFDLVLNNISETPQR 116

Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +     I       I  ++ + G +     GT           A   
Sbjct: 117 KKV--YNFTTPYMYSRYALITRSDETSIKGLNDIKGKTFVEGTGTPNAAL------AKKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             +              + +R D      +A YA   +N 
Sbjct: 169 GANITPSGDFTVSLNLVKENRADGTINATAAWYAYAKSNS 208


>gi|302549233|ref|ZP_07301575.1| ABC transporter substrate-binding protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302466851|gb|EFL29944.1| ABC transporter substrate-binding protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 313

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 96/269 (35%), Gaps = 23/269 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFA-EVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           S  A +  D+++ G L+ G + G    A      G    G D+D   A++  +     + 
Sbjct: 54  SAAALLPADVRRSGRLRIGSSVGFPPGAYYPNGPGKAPAGQDIDIADAVAKVLGVKAVR- 112

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--- 135
                + +    AL S + D+ + N   T  R  +  + F      DGQGF + K     
Sbjct: 113 --QDASFETILPALGSGKYDVGTGNFGVTTQRLKT--VDFV-TYINDGQGFAVKKGDTTL 167

Query: 136 --GISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAH 189
              ++ ++QL G +I   AGTT E TLA+      KA    Y   V+        A +  
Sbjct: 168 KKKVTDLTQLCGLTIGTGAGTTFETTLAEQKGVCAKAGKKPYEVKVYSENAATLTALQQG 227

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNIVSWTHY 246
           R D      S +  L+    +P+          +  +  A  +G      +   V+    
Sbjct: 228 RIDVIM---STINGLRYQAAQPAAGTAFLGEYHRLDVGFAFRKGSPLTKAFQAAVNELIE 284

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQR 275
               A  L     + + +     NP   R
Sbjct: 285 DGTYARILEKWGTSASAIDTSRINPPEHR 313


>gi|184199756|ref|YP_001853963.1| putative amino acid ABC transporter amino acid-binding protein
           [Kocuria rhizophila DC2201]
 gi|183579986|dbj|BAG28457.1| putative amino acid ABC transporter amino acid-binding protein
           [Kocuria rhizophila DC2201]
          Length = 265

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 67/243 (27%), Gaps = 13/243 (5%)

Query: 6   FVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            V++L        S     +  +L  I++ G ++ G+      +     +G   G++ + 
Sbjct: 10  LVAVLAACSPGGGSEDSGASEDLLARIQRTGEVRIGMEGTFRPYGYHDDSGALVGYEKEI 69

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  +        Y+          + + + D++  N   T  R       F     
Sbjct: 70  GDLIAKDLGVRA---TYVETQWDSLIAGVDAGRYDLVMNNIAPTAER--RENFDFSIPYA 124

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  + +   ++SV ++SG +       T          A       +     +E  
Sbjct: 125 ISQGRAGVAQDSPLTSVDEISGHTSA----QTETSNFGKSMAALG--AQLVPTTGFDEAI 178

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R +    D     A           ++   +   S  A  + +        V  
Sbjct: 179 MLVTFGRVEMTANDFVTFQAFFEQRPDARIRLLDGQVGDASESAVLMARNQPRLRAAVDK 238

Query: 244 THY 246
           +  
Sbjct: 239 SLT 241


>gi|319942069|ref|ZP_08016388.1| extracellular solute-binding protein family 3 [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804453|gb|EFW01331.1| extracellular solute-binding protein family 3 [Sutterella
           wadsworthensis 3_1_45B]
          Length = 239

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 14/203 (6%)

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               F      G+  G  VDF +  + +   +   I+   +       AL + ++D++  
Sbjct: 4   AYPPFEGKDEQGNPAGVSVDFMKDFAKSAGKE---IKIENIAFDGLIPALLTGKVDMVMS 60

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTL 160
           +   T  R  +  + F         G + HK  GI SV  L+  G  I  + G+T  L  
Sbjct: 61  SMTITDERRKT--VDFSDPYANAMLGILTHKGSGIKSVEDLNQKGRRIAAKIGSTGYLYA 118

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            +  K                        + D +  D   +Y  +     P     +   
Sbjct: 119 QNNLK----NAAVTALPDESACVMEVATGKADGFIYDQLTIY--RNWQKNPETTEAVFIP 172

Query: 221 ISK-SPLAPAIIQGDTEWYNIVS 242
             K  P   A+ +GD +  N ++
Sbjct: 173 FQKVEPWGVAVRKGDAKLLNALN 195


>gi|301155862|emb|CBW15330.1| arginine transporter subunit [Haemophilus parainfluenzae T3T1]
          Length = 239

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 84/257 (32%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +     +L  ++F+ NA           +   +      F      G+  GFD
Sbjct: 1   MKKLLLSA-----MLMGSAFAANAQ---------EITFAMEPSYPPFETTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +   +      +L++K+ D      D T  R   +   F  
Sbjct: 47  VDVANAICKEI---QATCHFKSQSFDALIPSLKAKRFDAAISAIDITEARAKQVA--FSN 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K   + +     +I VQ GTT +   A   K +N K     +  ++
Sbjct: 102 AYYDSSASYVALKGKADLASA----KTIGVQNGTTFQQYTAAETKQYNAK----SYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       +     +       + L  A+ +   E  
Sbjct: 154 DAILDLKNGRIDIIFGDTAVLSDMISKEPEIQFVGEKVTDKKYFGNGLGIAVNKSSKELL 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 ESLNKGLEAVKANGEYQ 230


>gi|194397297|ref|YP_002037131.1| amino acid ABC transporter amino acid-binding protein/permease
           [Streptococcus pneumoniae G54]
 gi|194356964|gb|ACF55412.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae G54]
          Length = 521

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|16330176|ref|NP_440904.1| glutamine ABC transporter [Synechocystis sp. PCC 6803]
 gi|1652664|dbj|BAA17584.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Synechocystis sp. PCC 6803]
          Length = 530

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 56/217 (25%), Gaps = 13/217 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            R  +          F     A G   GFDVD  +A+  A       +            
Sbjct: 40  SRQTIIVATEPTFPPFEMTDEATGQLTGFDVDLIQAIGEAA---QVTVDIQGYPFDGIIP 96

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASIC 149
           ALQS  +         T  R  +  ++F    +       +      I ++  L G  + 
Sbjct: 97  ALQSNTVGAAISAITITPER--AQSVSFSSPYFKSVLAIAVQDGNDTIKNLKDLEGKRLA 154

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  GTT           +        F+ +            DA   D   L    + + 
Sbjct: 155 VAIGTTG-----AMVATNVPGAKVTNFDSITSALQELVNGNADAVINDRPVLL-YAIKDA 208

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 I  D+ S+     A+        N       
Sbjct: 209 GLRNVKISADVGSEDYYGIAMPLAPPGEINQTREVLN 245


>gi|225860475|ref|YP_002741984.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229959|ref|ZP_06963640.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254588|ref|ZP_06978174.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|225727474|gb|ACO23325.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390862|gb|EGE89202.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 521

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K     S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYVSAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|254469217|ref|ZP_05082622.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Pseudovibrio sp. JE062]
 gi|211961052|gb|EEA96247.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Pseudovibrio sp. JE062]
          Length = 250

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 78/238 (32%), Gaps = 21/238 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M ++F  + +   ++   + + +            LK G +T       V    G+  GF
Sbjct: 1   MLREFIAATVFGTMMIAGAQAAD-------LGGHVLKVGSDTTYPPMETVDEKTGEIVGF 53

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A+ + I        ++       F AL   + D++      T  R+ ++   F 
Sbjct: 54  DVDIMDAICAKINCKAE---FVTTAWDGIFAALVQGEFDVVMSGVSITDERKKTM--DFS 108

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                  Q  ++  +   +S+        ++  Q GTT     A   +    + +  +++
Sbjct: 109 DPYLVVSQAILLRVEDEGTSLDAFQNGSKTLAAQTGTTN----AQLAEKLVTRDNTRLYD 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                  A +    D    D ++ +A +       E       +   PL     +G  
Sbjct: 165 TFAAAILALQNADVDGVIIDGTSAHAYEQEFA--GELTAAIKGLESDPLGIVFQKGSP 220


>gi|325126636|gb|ADY85966.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 486

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 84/226 (37%), Gaps = 14/226 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKG----FDVDFCRALSSAIFDDPSKIQYLPL 83
                +     G +     F     +G + G     D++  R ++     +  K +   +
Sbjct: 29  AQAASKKTYIIGTDQTFKPFEIQGKDGTYNGKNPGIDIEILREIAK---HENFKYELKIM 85

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +      ALQS QID +      T  R+ +  + F    Y DG    + K   I+S+  L
Sbjct: 86  SFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSYYTDGVCLAVAKDSKITSMKDL 143

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V+ GTT+ +      K +  K     +       A  +A   DA   D     +
Sbjct: 144 KGKTVNVKTGTTSAIYAKSIQKKYGFK--LKYYTNSNTSWADVKAGNADACFDDGP---S 198

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           L+      +   I+   +S +PLA A+ +G+ +    +     A +
Sbjct: 199 LRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMFNDGLAWL 244


>gi|116671679|ref|YP_832612.1| extracellular solute-binding protein [Arthrobacter sp. FB24]
 gi|116611788|gb|ABK04512.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 267

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 76/240 (31%), Gaps = 16/240 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
              L       T  +++A  +  I   G L    +     F     +G   GFD+D    
Sbjct: 23  ALSLTACGGSSTPAASSAGGVQLINA-GKLTVCSDVPYEPFEFQ-KDGKIVGFDMDIAAE 80

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +  +   +      A E   AL    +     +   T  R+  +   F      D 
Sbjct: 81  VAKDLKAE-LSVVDSSFEAIETGTALTGCDVS--ISSVSITDTRKAVM--DFSNPYMDDD 135

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              +  +  GI  +    G  + VQ  TT      +             FE    +  A 
Sbjct: 136 LTLVASEASGIKDIDSAKGKKVGVQQATTGAKYAQE------KGIDAQQFEDSGLLVQAL 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +A   DA  G+ S L           ++  + +  +   L  +I +G+T   + V+ T  
Sbjct: 190 QAGTIDAALGNQSVLA---YAIKDDPKYKRVENYATGEKLGISIKKGNTAMADQVNSTLK 246


>gi|116494153|ref|YP_805887.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|116104303|gb|ABJ69445.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 270

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 23/220 (10%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K      + I+ L     T+ S++       +++  ++  +  L  G+      F+  
Sbjct: 1   MLKKKLWVLLPIVALSAFILTACSSSKADSSKTSTVTSELINKNELTIGLEGTYAPFSYR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G  +GF+VD  +AL+  +       +++P         L S++ D++  N   T  R
Sbjct: 61  -KDGKLQGFEVDLGKALAKKVGVKA---KFVPTQWDSLIAGLGSQKFDLVLNNISETPQR 116

Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +     I       I  ++ + G +     GT           A   
Sbjct: 117 KKV--YNFTTPYMYSRYALITRSDETSIKGLNDIKGKTFVEGTGTPNAAL------AKKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             +              + +R D      +A YA   +N 
Sbjct: 169 GANITPSGDFTVSLNLVKENRADGTINATAAWYAYAKSNS 208


>gi|323496902|ref|ZP_08101930.1| prephrenate dehydratase [Vibrio sinaloensis DSM 21326]
 gi|323317976|gb|EGA70959.1| prephrenate dehydratase [Vibrio sinaloensis DSM 21326]
          Length = 258

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 69/228 (30%), Gaps = 12/228 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
           T  +   S L  I  +G L+ G                 ++GFD+D    L+  +     
Sbjct: 16  TQVAHAESRLQTILDQGVLRVGTTGDWNPMTMKDPATNSYRGFDIDVTTELAKDLGVK-- 73

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++Y+  + K     + + + D ++ +    + R    G +                   
Sbjct: 74  -VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQPYFYLAFVPVVQKKDLAK 131

Query: 137 ISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            S  +        +    GT  E  + D+F +       IV E          A R D  
Sbjct: 132 FSDWADFDKPDIKVAATLGTVQEKMVKDFFPSAKH----IVIEAPARDFQELLARRADVS 187

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                    L     +    V +      +P+A  + Q D  W N ++
Sbjct: 188 VTSNVEAATLVEKFKQ-LAIVPVKQPRKPTPIAMLLPQNDQVWINYIN 234


>gi|226940807|ref|YP_002795881.1| AotJ [Laribacter hongkongensis HLHK9]
 gi|226715734|gb|ACO74872.1| AotJ [Laribacter hongkongensis HLHK9]
          Length = 265

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 65/215 (30%), Gaps = 13/215 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ GI+     FA    +G  +GFDVD   AL  A+     +   +P +      AL + 
Sbjct: 29  LRFGIDGNYPPFASFGRDGQLQGFDVDIANALCDAM---QRQCLIVPQDWDGLIPALNAN 85

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D +  +   T  R     + F    Y      +       ++V    G  I    G+T
Sbjct: 86  KFDAILSSMSITAERRK--AVDFTDRYYRLPSRML-AAPGTDTAVGSFRGKRIGTLLGST 142

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +     Y+ +       + + R+        A R      D  A  A            
Sbjct: 143 QQRFARSYWGSRG--AEIVAYPRITSALDDLAAGRLAGVFVDALAGEAYLSRPGTAPRFT 200

Query: 216 IL-----PDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +                A+ +G+      ++   
Sbjct: 201 FVGPAFDDPAYFGEGAGIAVRKGNVALQTALNAAI 235


>gi|116872260|ref|YP_849041.1| glutamine ABC transporter binding and transport protein, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741138|emb|CAK20258.1| glutamine ABC transporter binding and transport protein, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 480

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 84/281 (29%), Gaps = 14/281 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   IL + +     F    + L           G +T    F   + +G   G D
Sbjct: 1   MKK-FSRFILTMAVACVAMFIFTGNGLNAKAAEETYLIGTDTTFAPFEF-EKDGKHVGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A++        K +   +       AL++ Q+D +      T  R+      F  
Sbjct: 59  MDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKFDFST 113

Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G    I+     I +   L G  + V+ GT            +      +VF+  
Sbjct: 114 PYFDSGVVMGILKDNDDIKNYEDLKGKKVAVKTGTEGYAFAEKIKDKYGFD--IVVFDDS 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++    +     A   D   L     T    +   I+ +    +    A+ +   +   
Sbjct: 172 AQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKDKNQELL 228

Query: 240 IVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGI 279
                    + A  E     K          N   + F+GI
Sbjct: 229 KKFNAGLVNIKASGEYKEILKTYLGKDAVKENTTEKGFMGI 269


>gi|88597582|ref|ZP_01100816.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562445|ref|YP_002344224.1| putative glutamine binding periplasmic protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|88190174|gb|EAQ94149.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360151|emb|CAL34945.1| putative glutamine binding periplasmic protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284926062|gb|ADC28414.1| putative glutamine binding periplasmic protein [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|315928251|gb|EFV07567.1| Putative glutamine binding periplasmic protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
          Length = 256

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDKRKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +GD    
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALK 216

Query: 239 NIVSW 243
           + +  
Sbjct: 217 DKLDN 221


>gi|306832078|ref|ZP_07465232.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425517|gb|EFM28635.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 280

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 14/256 (5%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      +      F  + S+++S       +  +          F+  + +G+  G+
Sbjct: 4   MKKILGVTGVALASTTFLAACSSSSSSSSSSSGKEEVVFATVGTTAPFSY-EEDGELTGY 62

Query: 60  DVDFCRALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D++    ++ A+F D    ++ +        F  L S +  +   N  +T  R       
Sbjct: 63  DIE----VAKAVFKDSDKYEVTFKKTEWSSIFTGLDSGKYQMGGNNISYTEERSA--KYL 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F           ++     I+S   + G S  V  GTTT   L +Y + +      I + 
Sbjct: 117 FSYPIGSTPSVLVVPNDSDITSYDDIGGHSTQVVQGTTTAAQLEEYNEENADNTVDINYT 176

Query: 178 RVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
                +I       + D    D   + ++   N        +     + P       Q  
Sbjct: 177 NENITQILTNLNDGKYDFKIFDAPTVNSVI-KNQSLDNLKTIDLESEEQPYIYFIFGQDQ 235

Query: 235 TEWYNIVSWTHYAMVT 250
            +    V+     +  
Sbjct: 236 EDLQEFVNKRLKELQE 251


>gi|238750609|ref|ZP_04612109.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia rohdei ATCC 43380]
 gi|238711257|gb|EEQ03475.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia rohdei ATCC 43380]
          Length = 256

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 71/248 (28%), Gaps = 16/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +++   +S S  A    +IK+ G L+ G+       A     G   G+D
Sbjct: 3   MKK---LSLGIMLVALISSQSALAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLVGYD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  ++L  ++     K+ ++P +       L + + DI       T  R     L+  P
Sbjct: 60  IDMAKSLGESL---KLKVNFVPSSWPTLSTDLAADKFDIAMGGVTATPGRAAQFALS-SP 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +           ++       +                    +  A+  +   I      
Sbjct: 116 VVKNGKIALANCQQSKKFPTLEAIDKETVKVIVNPGGTN-QSFVDANIKQAQIIRTNDNV 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQGDT 235
                 R    D    D   +      ++ P         ILP   S             
Sbjct: 175 ANLQGVRDQSADIMFTD--LIEGDYYQSEEPGVFCVATPEILPGTGSYKVY-MMAKDNQP 231

Query: 236 EWYNIVSW 243
               I  W
Sbjct: 232 LLNEINQW 239


>gi|39997849|ref|NP_953800.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Geobacter sulfurreducens PCA]
 gi|39984794|gb|AAR36150.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Geobacter sulfurreducens PCA]
 gi|298506783|gb|ADI85506.1| periplasmic substrate-binding histidine kinase [Geobacter
           sulfurreducens KN400]
          Length = 590

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 18/224 (8%)

Query: 17  FTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
            T+ + +A      + R   +  G +     +  +  NG   G++V+  RA++  +    
Sbjct: 43  GTASAADAP-----RDRHRTIVVGGDRDYPPYEFIDQNGKPAGYNVELTRAIAEVMG--- 94

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +++      E F AL+S ++D+L      +   + +  + F P            +  
Sbjct: 95  MTVEFRLGAWSEMFSALKSGRVDVLQG---ISWSEKRARQIDFTPPHTIVYHAIFARRDS 151

Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
              + +  L G  + +         LA+           ++     +      A  CD Y
Sbjct: 152 PPAAGLEDLRGRKVALHRDGIMHEYLAE----RGYGKDLVLTPTPADALRLLAAGGCD-Y 206

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      +  +R +  V +   I+      A+ QGD E  
Sbjct: 207 AVVAMVPGMYIIRENRLTNLVPVARSIAAQRYGYAVRQGDAELL 250


>gi|255323272|ref|ZP_05364407.1| L-cystine-binding protein TcyA [Campylobacter showae RM3277]
 gi|255299795|gb|EET79077.1| L-cystine-binding protein TcyA [Campylobacter showae RM3277]
          Length = 252

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 65/228 (28%), Gaps = 21/228 (9%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
             NA  L      G LK         ++    N    G+DV+  R ++  +        +
Sbjct: 20  GANAKTLE----NGVLKIATEGTYSPYSYHDKNDALTGYDVEVAREVAKKLNLKAE---F 72

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISS 139
           +         A  + + DI+      T  R+      +           + HK    I S
Sbjct: 73  VEAPWDAMLAAFDAGKADIVFNQVSITDERKK--KYDYTVPYTVAYAALVTHKDNNEIKS 130

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L G      + T+    +A  + A       +  +   +      + R DA   D  
Sbjct: 131 FEDLKGKKSA-HSATSNWAGIAQKYGA-----QIVTVDGFSKGVELIISRRADATINDSV 184

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYNIVSWTH 245
             Y            +         P+  A  + +G+ E  N V+   
Sbjct: 185 TFYDYINQRPNAPLKIA---ASGSEPIYSAAIVKKGNEELVNDVNKAL 229


>gi|225856181|ref|YP_002737692.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|225725803|gb|ACO21655.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
          Length = 521

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 85/287 (29%), Gaps = 40/287 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+    + F    Y      ++ K        S+   +GA I  Q G      +A    
Sbjct: 110 ERK--QEITFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKITSQQGVYLYNLIAQIPG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  A   DAY  +       +  N +     + P   +   
Sbjct: 168 AKKET----AMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEE 223

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
              +A  + + D     I      A +           ++++ K+  
Sbjct: 224 DTAIAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|330983020|gb|EGH81123.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 210

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 2/166 (1%)

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             +Q+  +D+   +T     R     + F    +  G   +  K         L G ++ 
Sbjct: 4   PLVQNGTVDVECGSTTNNAER--QQQVDFSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVV 61

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
             AGTT+E  L        M  + I  +   E      + R  A+  D + L        
Sbjct: 62  TTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDALLAGEMAKAK 121

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +P +  +     S       + +GD ++   V     A   + ++ 
Sbjct: 122 KPDDWAVTGTAQSYEIYGCMVRKGDAQFKKAVDDAIVATYKSGDIN 167


>gi|332077738|gb|EGI88199.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 521

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|295104661|emb|CBL02205.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 278

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 73/244 (29%), Gaps = 17/244 (6%)

Query: 1   MYKD---FFVSI----LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K      ++     L +      S                +  G +     F  +  +
Sbjct: 1   MKKHRRGLRLAACLLTLAMCAALLCSCGRTGKTDDYTAAMPVIVVG-SDNYPPFNYMGTD 59

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G DV+       A      +++++ ++ +++   +++  ID +  +      RE  
Sbjct: 60  GAPTGIDVELATE---AFGRLGYRVKFVTIDWEKKKELVENGTIDCIWGSFSM-DGREEE 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-TLADYFKAHNMKYH 172
                     +  Q   +     I ++  L+G  + VQ+ T  E   L            
Sbjct: 116 YQW--AGPYLYSRQVVAVRSDSDIRTLQDLTGKVVVVQSTTKPEELFLNAEQNGLPRLRR 173

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
               +  + +         DA     S     +   D   E+ IL + +  + L  A  +
Sbjct: 174 LYSLQNRDLLYTTLLKGYADALAAHES--AIRQFMKDYSVEYRILDEPLMTARLGVAFAK 231

Query: 233 GDTE 236
              +
Sbjct: 232 ERGD 235


>gi|225858020|ref|YP_002739530.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae 70585]
 gi|225720298|gb|ACO16152.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae 70585]
          Length = 276

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGLLAACSGGAKKEGEAASKKEIIVATNGSPRPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S+  + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSW 243
           G  E  + V  
Sbjct: 235 GQDELKSFVDK 245


>gi|222109460|ref|YP_002551724.1| family 3 extracellular solute-binding protein [Acidovorax ebreus
           TPSY]
 gi|221728904|gb|ACM31724.1| extracellular solute-binding protein family 3 [Acidovorax ebreus
           TPSY]
          Length = 253

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 74/224 (33%), Gaps = 13/224 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L +I+K G +  G       F   K      G++++   A+   +        +  +   
Sbjct: 24  LEEIQKSGTIILGSEGQYAPFNFFKGK-QLTGYEIEVAEAVVKKMGLKYE---WKTVGFD 79

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
                L   + D++  +   T  R  S  + F    Y  G   +  K   ++  + L+G 
Sbjct: 80  ALLTGLAQDRWDLVIASHAITDER--SKAVTFTLPHYCSGGIIVSMKP-EVAKAADLNGK 136

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            + VQ GTT    +               F   E    A  + R DA+  D     A ++
Sbjct: 137 VVAVQTGTTYLDAVKKVPGVK----DVKNFPTDEAARNALASKRVDAWVTDR--FVAKEM 190

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               P       D++    +A A+ +G+    +  +      + 
Sbjct: 191 LAKAPKAGFRTGDMLFVEQVASAVSKGNQGLADAWNKALKEAIA 234


>gi|104773375|ref|YP_618355.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422456|emb|CAI97009.1| Amino acid ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 527

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 109/331 (32%), Gaps = 59/331 (17%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55
           M K   +  +++  ++    + S +       +  G LK G+      +   +   ANG 
Sbjct: 1   MKKHSSWISALMAAVLTLVLAVSWSQPA----QASGTLKIGMEANYAPYNWTQTTSANGA 56

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            K         G+DV   + ++  +      +            AL S +ID++      
Sbjct: 57  VKIDGTSSYANGYDVKIAKIIAKKLGKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSP 113

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLADY 163
           T  R     + F           I++K+   +    L    GA +  Q GT     +   
Sbjct: 114 TAERRK--AINFTSPYRTTNFVVIVNKQSKYAKAKYLTNFKGAKLTAQQGTLHYDLIKQL 171

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A          +    +  +  A   D Y  + + L + ++ +        S+     
Sbjct: 172 PGAKREP----ASKDFAAMRESLEAGTIDGYVAEDTELTSFQMVDSNITGVNLSKMKGFK 227

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
              S + ++  + +G+ +  + V+     + T+E   + ++ + Q  + +T  +      
Sbjct: 228 VSSSDAEVSIGVKKGNAQLLSQVNKVLAGISTSERNKLMKEAVQQQPQTSTKKE------ 281

Query: 279 IDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
                          +W   +++   NYG+M
Sbjct: 282 ---------------NWLVSMLK---NYGQM 294


>gi|120405655|ref|YP_955484.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119958473|gb|ABM15478.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium vanbaalenii PYR-1]
          Length = 492

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 63/233 (27%), Gaps = 16/233 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               IL  ++      +  AS               +T    F    A G+  G D+D  
Sbjct: 24  VLTVILATVLGAGLLGAATASAQEQ-----NYVIATDTTFAPFEFQDAGGELVGIDMDLI 78

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R ++         +   PL       A+Q+ Q   +      T  R+      F    + 
Sbjct: 79  REIAKD---QGFTVDIRPLGFDAALQAVQANQAAGVIAGMSITDERKAV--FDFSDPYFE 133

Query: 125 DGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            G    ++     I+S   L G  + V+ GT            +      + F     + 
Sbjct: 134 SGVQMAVLDSNDTIASYEDLRGQRVAVKNGTEGAEFAESIKDKYGF--QIVSFADSASMF 191

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              +     A   D      L     + +    +      S    A+ +G   
Sbjct: 192 EEVKTGNSVAVFEDYPV---LLYGIQQGNGFKTVTPKEQGSNYGFAVNKGRNA 241


>gi|330950141|gb|EGH50401.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Pseudomonas syringae Cit 7]
          Length = 264

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 72/249 (28%), Gaps = 20/249 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F   +L L +   +  +   +        G LK G+      F   + +    GFD + 
Sbjct: 8   RFATCLLGLALFAGSVQAAPTATP------GTLKVGMEISYPPFESYEGD-KVVGFDPEV 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              L+  +     K++++        L L + + D +      T  R             
Sbjct: 61  ANELARQLGG--MKVEFVDTRFPNLILGLNANRFDTIISGMYITDERTRQAE---AIPYA 115

Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVF 176
             G   ++             L G  + +Q GT     L         + +  +     F
Sbjct: 116 QVGAAIMVRSDSTAKPQQPEDLCGLKVGLQQGTNWINQLKAVSADYCVRQNKGEIAISEF 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E   A  +    A+  +ISA   + +   R    +     +    L   + +G+ E
Sbjct: 176 PTTAEASQALISGNIQAHL-EISAAAKMIVDKARGRIVISSEKSLYPQTLGIYVKKGNGE 234

Query: 237 WYNIVSWTH 245
               +    
Sbjct: 235 LIEKLRDVV 243


>gi|300781313|ref|ZP_07091167.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium genitalium ATCC 33030]
 gi|300533020|gb|EFK54081.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium genitalium ATCC 33030]
          Length = 299

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 14/237 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +  DI+  G L  G N     F    + G   G ++D   AL+S +  +        
Sbjct: 47  AAMVPEDIQASGTLTIGTNPPFAPFEFKNSQGRMIGLEMDLGHALASVMGLEFQA---QE 103

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +      A+Q+  +D        T  R       F  + +         +         
Sbjct: 104 QDFSMILPAVQAGTLDAGMSGFTDTEER----RENFEFVNFLYAGIQWATQPGSGVDPEN 159

Query: 143 LSGASICVQAGTTTELT----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             G ++ VQ  T +E       A+  +        + ++  +    A    R DA + D 
Sbjct: 160 PCGLTVAVQRTTVSETDDIRPKAEKCEEEGDPITILSYDTSDNAALAALVGRADALSADS 219

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                    +D   +  +  ++   +P   A+ +      + ++     ++   E  
Sbjct: 220 PVSAWAVERSD--GQLELTGEMFDAAPYGIAVPKDSP-LADALAAAMQHLIDTGEYQ 273


>gi|148988205|ref|ZP_01819668.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|148993994|ref|ZP_01823364.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|148996854|ref|ZP_01824572.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|149006411|ref|ZP_01830123.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|168482691|ref|ZP_02707643.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|168488141|ref|ZP_02712340.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|168492631|ref|ZP_02716774.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|168576830|ref|ZP_02722680.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|169834409|ref|YP_001693956.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|182683418|ref|YP_001835165.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|221231314|ref|YP_002510466.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae ATCC 700669]
 gi|225854025|ref|YP_002735537.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|303255927|ref|ZP_07341957.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|303259526|ref|ZP_07345503.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|303262389|ref|ZP_07348332.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|303264806|ref|ZP_07350723.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|303267362|ref|ZP_07353220.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|303269680|ref|ZP_07355436.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|307067096|ref|YP_003876062.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|307126668|ref|YP_003878699.1| amino acid ABC transporter amino acid-binding protein/permeae
           [Streptococcus pneumoniae 670-6B]
 gi|147757429|gb|EDK64468.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|147762188|gb|EDK69150.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|147926669|gb|EDK77742.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|147927583|gb|EDK78610.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|168996911|gb|ACA37523.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|172043569|gb|EDT51615.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|182628752|gb|ACB89700.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|183573209|gb|EDT93737.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|183576815|gb|EDT97343.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|183577459|gb|EDT97987.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|220673774|emb|CAR68274.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae ATCC 700669]
 gi|225724181|gb|ACO20034.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|301801361|emb|CBW34046.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae INV200]
 gi|302597102|gb|EFL64218.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|302636488|gb|EFL66980.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|302639460|gb|EFL69918.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|302640777|gb|EFL71168.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|302643095|gb|EFL73384.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|302645673|gb|EFL75903.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|306408633|gb|ADM84060.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|306483730|gb|ADM90599.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 670-6B]
 gi|332075296|gb|EGI85766.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332076898|gb|EGI87360.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 521

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|254707525|ref|ZP_05169353.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|254708939|ref|ZP_05170750.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           pinnipedialis B2/94]
 gi|256030465|ref|ZP_05444079.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           pinnipedialis M292/94/1]
 gi|256158449|ref|ZP_05456347.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           ceti M490/95/1]
 gi|256253869|ref|ZP_05459405.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           ceti B1/94]
 gi|261221005|ref|ZP_05935286.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261315006|ref|ZP_05954203.1| extracellular solute-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261316437|ref|ZP_05955634.1| extracellular solute-binding protein [Brucella pinnipedialis B2/94]
 gi|265987507|ref|ZP_06100064.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|265996965|ref|ZP_06109522.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|260919589|gb|EEX86242.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261295660|gb|EEX99156.1| extracellular solute-binding protein [Brucella pinnipedialis B2/94]
 gi|261304032|gb|EEY07529.1| extracellular solute-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|262551433|gb|EEZ07423.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|264659704|gb|EEZ29965.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
          Length = 281

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|237816313|ref|ZP_04595306.1| amino-acid ABC transporter-binding protein patH precursor [Brucella
           abortus str. 2308 A]
 gi|237788380|gb|EEP62595.1| amino-acid ABC transporter-binding protein patH precursor [Brucella
           abortus str. 2308 A]
          Length = 301

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 21  MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 79

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 80  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 136

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 137 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 195

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 196 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 253

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 254 PEDQDLRDALNKAI 267


>gi|227327465|ref|ZP_03831489.1| putative extracellular solute-binding protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 277

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 99/246 (40%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +      + + ++  + FS  A    S    IK+ G L+ G+  G   + +  + G+W
Sbjct: 1   MKRSLHQVFMAITLINASFFSQAAETQTSTWQHIKQTGELRIGVAQGEPWYFKNPSTGEW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   +  + L++ +      ++           ALQ+ QID +    D T  R+    +
Sbjct: 61  DGIGYNIGKELANDLGVKLVTVE---TTWGNAIAALQTGQIDTML-VLDPTEERKK--AV 114

Query: 117 AFR-PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHP 173
            F     ++  QG ++     +++   L+     I V  G++ +L L             
Sbjct: 115 DFPEQPFFWYAQGVLIRDGIAVTNWDDLNREDVKIGVTLGSSPDLILTKRLPKA----QL 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F  ++E  AA+ A R DA +    AL   +    + +  +ILP  I +   + AI + 
Sbjct: 171 VRFPNMDEGVAAFYAGRVDALSYFHPALALQQAKVGKGN--LILPKPIIEVSTSGAIRKE 228

Query: 234 DTEWYN 239
             + ++
Sbjct: 229 TDQTFH 234


>gi|209546926|ref|YP_002278844.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538170|gb|ACI58104.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 274

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 78/261 (29%), Gaps = 15/261 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKG 58
           M +  F ++L      +   S  A    D    G L+             +  G  +  G
Sbjct: 5   MKRALF-TLLATAASGYAGHSYCADQKPDFVSNGVLRVCTAGDFPPMQYYQNPGDTNLVG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D   A++       +K +Y+  + K    +L S + D+++     T  R        
Sbjct: 64  FEIDVVDAIARE---WDAKAEYVIGDFKGLLPSLDSMRCDLVASGIMITPAR--LEKYDG 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA----HNMKYHPI 174
            P         +        S   +SG  + ++AGTT E  ++D  K             
Sbjct: 119 VPYFGSHVVLVVPKTDDATKSTDDMSGKVMAIEAGTTYETVISDLNKKLAASGKDPVTMQ 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +     +       R  +     +      +    P    I             + + +
Sbjct: 179 TYPSASGVIQQILVGRAASTITQDTTAAFRMMQM--PDRLKIAYTYDESETYGIYMRK-N 235

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
            +   +V     ++  + ++ 
Sbjct: 236 PQNRQMVKAALESLQASGQMK 256


>gi|154508735|ref|ZP_02044377.1| hypothetical protein ACTODO_01243 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798369|gb|EDN80789.1| hypothetical protein ACTODO_01243 [Actinomyces odontolyticus ATCC
           17982]
          Length = 311

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 81/229 (35%), Gaps = 12/229 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +   IKKRG L+ G +TG      + A+G    G+D+D  +AL+  +  +  +    
Sbjct: 58  AALVPDSIKKRGTLRNGASTGYAPAEYMDADGQTPIGYDIDINKALAKVMGLNAGET--K 115

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                    AL + + D+   +   T  RE  + +    +      G      K     S
Sbjct: 116 HSEFPTIIPALGT-KFDVGISSFTITSEREQQVNMV-SYLNVGSAWGVAAGNPKN-FDPS 172

Query: 142 QLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              GA+I VQ GT  E   A    +   A   K   +  E   +I       + DA   D
Sbjct: 173 NPCGATIAVQTGTAQEEYAAALSDECVAAGKEKITVMPHELQTDIATKLTGGQYDATLAD 232

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + +     ++    +   L D    +P   A+ + D +    V     
Sbjct: 233 STVI--GYTSSQSAGKIEQLGDTFESAPQGVAVAKDDAQLAEAVQKAMQ 279


>gi|291550027|emb|CBL26289.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Ruminococcus torques L2-14]
          Length = 271

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 79/250 (31%), Gaps = 28/250 (11%)

Query: 1   MYKDFFVSILC--LIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGF 47
           M +     +LC  L +       ++            S L  +K +G L  G+ T     
Sbjct: 1   MKRKVLSVLLCAGLAVSMLAGCGSDSSNANKKAESTGSDLEYVKDKGTLVVGV-TDFEPM 59

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                NG+W GFD D  +A + +I  +     ++ ++   + L L  K ID +      T
Sbjct: 60  DYKDDNGEWVGFDADMAKAFAESIGVEAE---FVEIDWDNKELELDGKSIDCVWNGM--T 114

Query: 108 LLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           L+ E+   +        + Q  ++   K         +   +  V+AG+  E  +     
Sbjct: 115 LIDEVKSSMECTDAYMNNAQVVVVPADKADKYQDEESVKDLTFAVEAGSAGEDQVER--- 171

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
              +           +      +   DA   D     A+       ++      + ++  
Sbjct: 172 ---IGAQYTAVSSQADALMEVASGNSDAAAIDALMAAAMIGEGTGYADLTYTISLNNEE- 227

Query: 226 LAPAIIQGDT 235
                 +G  
Sbjct: 228 YGVGFRKGSD 237


>gi|195978808|ref|YP_002124052.1| amino acid ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225871211|ref|YP_002747158.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
 gi|195975513|gb|ACG63039.1| amino acid ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225700615|emb|CAW95155.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
          Length = 522

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 83/291 (28%), Gaps = 34/291 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     +  L+I      +  A          +L+ G+      F      ++     
Sbjct: 1   MKKLVLSCLATLLIFLGGIGTVQAD--------HYLRVGMEAAYSPFNWTQDDSSNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  D   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQIAKKIAKALNKDLLVVK---TSWTGLIPALTSGKIDLIAAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R+  +   F    Y      ++    K     S+   SGA +  Q G      L     
Sbjct: 110 ERKKEIA--FSNSYYTSEPVIVVASNGKYAKARSIKDFSGAKVTAQQGVWHVNLLPQLEG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   D Y  +       +  N       +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDGYISERPEAMTAETANKAFKMITLTKGFTVSES 223

Query: 226 LAPAIIQGD--TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            A   I      +    V+    A+   E L +  K I Q   +    + +
Sbjct: 224 DAAIAIGMKKGDDRLTAVNQVLDAISQKERLALMDKMIQQQPSEPKADEAK 274


>gi|57237660|ref|YP_178908.1| amino acid-binding protein [Campylobacter jejuni RM1221]
 gi|148926522|ref|ZP_01810204.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|205356320|ref|ZP_03223085.1| glutamine binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|57166464|gb|AAW35243.1| amino acid-binding protein [Campylobacter jejuni RM1221]
 gi|145845216|gb|EDK22310.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|205345705|gb|EDZ32343.1| glutamine binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315058269|gb|ADT72598.1| Glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 256

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 26/241 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +G+ E  
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNAELK 216

Query: 239 N 239
            
Sbjct: 217 K 217


>gi|331014465|gb|EGH94521.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 266

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 11/242 (4%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66
            +  L  +  + F    + L  +++R  L  G+      F  +       +G +V+    
Sbjct: 1   MLGVLASIAVSGFVLADATLDKVQERHRLVVGVLLSGGPFGSIDPQTRKPQGVNVELAED 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +  +   ++ + +    R   LQ  ++D+L  N +WT  R   LG    P     G
Sbjct: 61  IGKRLGVE---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLGSVPTPFYRVGG 117

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              ++ K   I+    L G  +C   G++    L +             F+   E   A 
Sbjct: 118 TAAVL-KDSAITRWEDLKGQPVCTSQGSSYIKALTE------FGADIKAFKSSSESLLAL 170

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           R + C A   D + +  L   ND    +  +   ++ +P       G+T+  N +     
Sbjct: 171 RGNNCVAAVHDATLINPLLAGNDEWKGYRAIAPELNPAPSVIWTRSGETDTQNRLDSIVQ 230

Query: 247 AM 248
             
Sbjct: 231 DW 232


>gi|312868037|ref|ZP_07728241.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096441|gb|EFQ54681.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 520

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 82/284 (28%), Gaps = 29/284 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K  F  +  L I    +   +A          +L+ G+      F             
Sbjct: 1   MKKTLFALLTGLFICLGITQIAHAD--------DYLRIGMEAAYAPFNWTQEDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +   P  ++    +      AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKVAEGLGKKPLIVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    ++ + L          +   + L        
Sbjct: 110 ERKKEVA--FSNSYYTSEPVMLVRKDGNYANATSLDDFKDAKVT-SQQGVYLYSLISQLK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       ++  A  +   DAY  +       +  N +                A 
Sbjct: 167 GAKQETAMGDFAQMRQALESGVIDAYVSERPEALTAESANSKFKMIQFKKGFEVGEEDAT 226

Query: 229 AIIQGD--TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
             I         + V+ T  A +++E+      ++ +    +++
Sbjct: 227 IAIGMKKGDSRIDQVNATL-AKISSEDQVKLMDDMIKKQPASSD 269


>gi|298346598|ref|YP_003719285.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC
           43063]
 gi|298236659|gb|ADI67791.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii ATCC 43063]
          Length = 294

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 82/281 (29%), Gaps = 36/281 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------LGDIK------------KRGFLKCGIN 41
           M K    +   L+ L   S   N+            IK             R  L+  ++
Sbjct: 1   MKKIPAAAGAILLTLSLASCMGNSDSAGGKSYDFDSIKPDPEIVAMVPQANRETLRVAMD 60

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                   +  N    G++VD  +ALS  +     KI     +       +     D+  
Sbjct: 61  IPYSPAMFLDDNNQPTGYEVDVLKALSRLMGVSELKIS--DEDFDAIIPKVNDGTYDLGM 118

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTEL 158
            +      R          +  +   GFI   + G           G  +  ++ T+ E 
Sbjct: 119 ASITIKKSRMAQ-----VNMISYIQAGFIYGTQGGNPKNFDPANPCGLKVAAKSETSQEN 173

Query: 159 TLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            L D      KA       +  +  E++     A   DA  G+   +   +  N +    
Sbjct: 174 ALQDVSASCLKAGKPAIQIVSSDNQEDLIQQVAAGTLDAIIGESPIMAYAESRNPK---F 230

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + +    +P  PAI + + E    V      M+    L 
Sbjct: 231 ATVGEAFHVAPQGPAIAKDNPELAKAVQAGLQKMIDTGLLN 271


>gi|269954897|ref|YP_003324686.1| extracellular solute-binding protein family 3 protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269303578|gb|ACZ29128.1| extracellular solute-binding protein family 3 [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 294

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 62/215 (28%), Gaps = 11/215 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L             V A+G    G D+D   A+++ +     ++            A+
Sbjct: 58  GKLTVAAELSYAPLEFVDADGKTPVGLDIDIATAIATVMG---LEVDVQSAQFDSIIPAI 114

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQ 151
            + + ++       T  R  ++ +      +  G    +            L G ++ VQ
Sbjct: 115 GT-RYEVGVSAFTITPERLETVTM---VSYFSAGSQLAVQAGNPDGVDPDDLCGLTVGVQ 170

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT  +  L +   A       + ++    + A     +  A   D           D  
Sbjct: 171 TGTVQQEELEELSAACETPIEILPYDSQATVTANLVGGKLQAMYADSPITAYAVEQAD-- 228

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                L +I   +P    + + D E    V     
Sbjct: 229 GALETLGEIRDAAPYGVVVAKDDPELAEAVRAALQ 263


>gi|293364251|ref|ZP_06610977.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|291317097|gb|EFE57524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
          Length = 543

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 81/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +         A          +L+ G+      F             
Sbjct: 23  MKKLCLSILASLALTLGLVSQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 74

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 75  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 131

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   S      +   + L D      
Sbjct: 132 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLEDFSGAKIT-SQQGVYLYDLISQIP 188

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +       P   +      
Sbjct: 189 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEAMTAESANAKFKMIQPQPGFKTGEEDTA 248

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+    I      A +           ++++ K+  
Sbjct: 249 IAIGLRKDDSRISQI-----NASIETISKDEQVALMDRMIKEQP 287


>gi|213691656|ref|YP_002322242.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|213523117|gb|ACJ51864.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|320457745|dbj|BAJ68366.1| putative amino acid ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 270

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 17/223 (7%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           L  +K+ G +          F+   +   +  G+DV+  +A++  +        +   + 
Sbjct: 37  LEQVKQSGKIVFATEGTYAPFSYHDSKTNELTGYDVEVAKAIAKEVGIKAE---FAEGSF 93

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQL 143
                 + +K+ D ++     T  R+      F     +     I  K+    ++S   +
Sbjct: 94  DSLLAGVDAKKYDTVADQISATDERKA--KYDFSEPYTYSYGVVITSKENPKNVTSFDDV 151

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G         T         +        +      +   A  + R D        L A
Sbjct: 152 KGLRAAE----TGTSNWNKTAQEKG--ATIVQVNDFGQQVDAITSGRAD--VSLNDGLAA 203

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPA-IIQGDTEWYNIVSWTH 245
           L     +P   + +     K+P A     +G  +    V+   
Sbjct: 204 LDYLKQKPDADIKIAAKSEKTPAAYLPFRKGSDDLVKEVNKAI 246


>gi|182683122|ref|YP_001834869.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae CGSP14]
 gi|182628456|gb|ACB89404.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae CGSP14]
          Length = 276

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G    +  +    N+    F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGQAASKKEIIVATNSSPKPFNY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYNMAVNNISYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S+  + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDESSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDYLKVIELPSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSW 243
           G  E  + V  
Sbjct: 235 GQDELKSFVDK 245


>gi|325686791|gb|EGD28816.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 521

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 69/252 (27%), Gaps = 26/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K        L++            +  I+   +L+ G+      F       +NG  K
Sbjct: 1   MKKLLVTLFTALLVTL--------GTVRVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++    +      AL S +ID++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIAQEMGKEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +S   L          +   + L +     +
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLLVRKDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLS 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       ++  A  +   D Y  +       +  N                  A 
Sbjct: 167 GAKKETAMGDFAQMRQALESGVIDGYISERPEALTAETANSNFKMIQFEKGFEVGEEDAS 226

Query: 229 AIIQGDTEWYNI 240
             I    +   I
Sbjct: 227 IAIGMRKDDNRI 238


>gi|306834193|ref|ZP_07467313.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
 gi|304423766|gb|EFM26912.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
          Length = 280

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 14/256 (5%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K      +      F  + S+++S       +  +          F+  + +G+  G+
Sbjct: 4   MKKILGVTGVALASTTFLAACSSSSSSSSSSSGKEEVVFATVGTTAPFSY-EEDGELTGY 62

Query: 60  DVDFCRALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           D++    ++ A+F D    ++ +        F  L S +  +   N  +T  R       
Sbjct: 63  DIE----VAKAVFKDSDKYEVTFKKTEWSSIFTGLDSGKYQMGGNNISYTEERSA--KYL 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F           ++     I+S   + G S  V  GTTT   L +Y + +      I + 
Sbjct: 117 FSYPIGSTPSVLVVPNDSDITSYDDIGGHSTQVVQGTTTAAQLEEYNEENADNTVDINYT 176

Query: 178 RVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
                +I       + D    D   + ++   N        +     + P       Q  
Sbjct: 177 NENITQILTNLNDGKYDFKIFDAPTVNSVI-KNQSLDNLKTIDLESEEQPYIYFIFGQDQ 235

Query: 235 TEWYNIVSWTHYAMVT 250
            +    V+     +  
Sbjct: 236 EDLQEFVNKRLKELQE 251


>gi|152979004|ref|YP_001344633.1| arogenate dehydratase [Actinobacillus succinogenes 130Z]
 gi|150840727|gb|ABR74698.1| Arogenate dehydratase [Actinobacillus succinogenes 130Z]
          Length = 260

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 76/260 (29%), Gaps = 15/260 (5%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    + L  ++     + S+    L  I +R  +K         F+    NG ++G 
Sbjct: 1   MKKSVLTAFLTALVAGSAQAESSAPDTLNKILERKEIKVCSPGDYKPFSF-DNNGKFEGI 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D    L+ ++    +K+  +    K       + + DI       TL R       F 
Sbjct: 60  DNDLIDKLAESL---DAKVTIVKTTWKTLMDDFTAGKCDIGVGGISITLAR--QQKALFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
              + +G+  ++  +      +          I    G + E          N+  +P  
Sbjct: 115 EPYFTNGKTPLVRCEDVDKYQTVEQINRPEVKIVANPGGSNENYARTVLTKANLTMNP-- 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                 I       + D +  + +        +      V     +  +     I  GD 
Sbjct: 173 --ENLTIFQQIIDKKADVFVTEAAEAIVKSYEHKGVLCGVNPDKPLKPAQNGWIIPNGDF 230

Query: 236 EWYNIVSWTHYAMVTAEELG 255
            +   V    +    + EL 
Sbjct: 231 RFKEYVDQFFHLERQSGELD 250


>gi|322387281|ref|ZP_08060891.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus infantis ATCC 700779]
 gi|321141810|gb|EFX37305.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus infantis ATCC 700779]
          Length = 269

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 68/197 (34%), Gaps = 8/197 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F +  +  +++     S   S          +       +  F   + +G+  G+D
Sbjct: 1   MKKLFLLLAISPLLVACG-QSKQDSTSTSTASPKTIVVATAGDIPPFDF-EKDGNLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + +   +  D  KI++     +  F  + + +    + N  +T  R  +    +  
Sbjct: 59  VEVLKVVDEKL--DQYKIEFQKTAWESIFPGVDAGRYQAAANNLSYTKER--ADKYLYSL 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    +  K K ++S+  ++G +     GT+T   + D+ + H+     I +   +
Sbjct: 115 PIAKNPLVLVSRKDKALTSLQDIAGKTTRDDTGTSTAKVVTDWNQNHSDNPATIQYSGED 174

Query: 181 EI--DAAYRAHRCDAYT 195
                        D   
Sbjct: 175 VAKRLTDLANGEFDFLI 191


>gi|322377150|ref|ZP_08051642.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M334]
 gi|321281863|gb|EFX58871.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M334]
          Length = 521

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 40/287 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MKKIYLSIFTSLLLILGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+    +AF    Y      ++ K        S+   +GA I  Q G      +A    
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLDDFNGAKITSQQGVYLYDLIAQIPG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  A   DAY  +       +  N +     + P   +   
Sbjct: 168 AKKET----AMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEE 223

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
              +A  + + D     I      A +           ++++ K+  
Sbjct: 224 DTAIAIGLRKDDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|304389688|ref|ZP_07371648.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304327092|gb|EFL94330.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 298

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 82/281 (29%), Gaps = 36/281 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------LGDIK------------KRGFLKCGIN 41
           M K    +   L+ L   S   N+            IK             R  L+  ++
Sbjct: 5   MKKIPAAAGAILLTLSLASCMGNSDSAGGKSYDFDSIKPDPEIVAMVPQANRETLRVAMD 64

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                   +  N    G++VD  +ALS  +     KI     +       +     D+  
Sbjct: 65  IPYSPAMFLDDNNQPTGYEVDVLKALSRLMGVSELKIS--DEDFDAIIPKVNDGTYDLGM 122

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTEL 158
            +      R          +  +   GFI   + G           G  +  ++ T+ E 
Sbjct: 123 ASITIKKSRMAQ-----VNMISYIQAGFIYGTQGGNPKNFDPANPCGLKVAAKSETSQEN 177

Query: 159 TLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            L D      KA       +  +  E++     A   DA  G+   +   +  N +    
Sbjct: 178 ALQDVSASCLKAGKPAIQIVSSDNQEDLIQQVAAGTLDAIIGESPIMAYAESRNPK---F 234

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + +    +P  PAI + + E    V      M+    L 
Sbjct: 235 ATVGEAFHVAPQGPAIAKDNPELAKAVQAGLQKMIDTGLLN 275


>gi|301793689|emb|CBW36075.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae INV104]
          Length = 521

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|300716600|ref|YP_003741403.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae
           Eb661]
 gi|299062436|emb|CAX59553.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae
           Eb661]
          Length = 259

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 83/252 (32%), Gaps = 24/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +   ++   ++ +              L+ G+ +    F    A+G+ +GFD
Sbjct: 1   MKKLNALFVAVGLLSSMSALAQE-----------TLRYGLESQYPPFESRNASGELEGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+  A      K  ++  +      AL +K+ D ++   + T  R  S+G  F  
Sbjct: 50  IELGKAICQA---GNFKCSWVESSFDALIPALAAKKFDAINSAMNITEARMKSIG--FTK 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      I     G+      L G +I V  G+  E     +++          ++  
Sbjct: 105 PIYRIPSQLIGKSGSGLQPTVDSLKGKNIGVLQGSVQETFAKKHWEPQG--VTVTSYQDQ 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234
            ++     A R D      +A  +  L   +          +  +      +   + + D
Sbjct: 163 NQVYNDMVAGRLDGTLVMSAAGQSGFLEKPQGKGFAFAGGAVEDTQILGVGIGFGLRKDD 222

Query: 235 TEWYNIVSWTHY 246
            +    +     
Sbjct: 223 AKRKQELDAAIT 234


>gi|150403484|ref|YP_001330778.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150034514|gb|ABR66627.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 264

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 80/242 (33%), Gaps = 19/242 (7%)

Query: 11  CLIILFFTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC 64
            +++      S+ A    DI     ++ G LK G+      F       G+ +GFDVD  
Sbjct: 15  TVLMSSGCISSSEAQTTDDISWKNVEENGVLKVGLCAAWPPFESRNETTGEIEGFDVDLA 74

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +AL   +  +   ++ +    +     L     D L               +    + Y 
Sbjct: 75  KALGEELGVE---VEIIDAEWQALLGGLSKGDYDTLITCMS--KKEASVENVEMSDVYYE 129

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                ++      I+SVS LSG  + VQ G+ +E  +     A +       +    E  
Sbjct: 130 LNDVIVVRNDNNEINSVSDLSGKIVGVQLGSGSEQAV----DALSGIQEIKRYNYNPEAM 185

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              + +R DA     +   +         +  +L   ++ + +     +G  E    ++ 
Sbjct: 186 IDLQNNRSDAVVVGYTYALSEISKYP---DLKVLDTPVASAEIVMVQKEGAEELTAKLNE 242

Query: 244 TH 245
             
Sbjct: 243 AL 244


>gi|325519103|gb|EGC98587.1| extracellular solute-binding protein [Burkholderia sp. TJI49]
          Length = 257

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 10/218 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ GI+           +G  +GFDVD    +           Q++ L       ALQ+
Sbjct: 27  TVRLGIDPTYPPMDSKAPDGSLQGFDVDLGNEICRRA---QLHCQWVELEFSGMIPALQA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           ++ID +  +   T  RE    + F    +      +     G+ S    L+G  + VQ+G
Sbjct: 84  RKIDAILSSMAITEKREK--QILFSSKLFRFKSRLVARPASGLGSTVASLAGKRVGVQSG 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E     ++    +    + ++  +++ A     R DA            L   +   
Sbjct: 142 TQFESWALAHWAPAGVG--VVPYKSQDDVFADLVNGRLDAALLGAVEADYGFLRTPKGKG 199

Query: 214 HVILPDI--ISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              +     +    +   + Q DT     +     +M+
Sbjct: 200 FAFVGAPLDMGDRGVGIGMRQSDTALKASIDGAIASML 237


>gi|225628151|ref|ZP_03786186.1| amino-acid ABC transporter-binding protein patH precursor [Brucella
           ceti str. Cudo]
 gi|225616976|gb|EEH14023.1| amino-acid ABC transporter-binding protein patH precursor [Brucella
           ceti str. Cudo]
          Length = 301

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 21  MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 79

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 80  GFGRDLLDEVAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 136

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 137 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 195

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 196 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 253

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 254 PEDQDLRDALNKAI 267


>gi|237650335|ref|ZP_04524587.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974]
 gi|237822023|ref|ZP_04597868.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974M2]
          Length = 521

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +   P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKKPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +S   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKIT-SQQGVYLYDLIAQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|144898712|emb|CAM75576.1| Bacterial extracellular solute-binding protein, family 3
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 269

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 82/249 (32%), Gaps = 15/249 (6%)

Query: 1   MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NG 54
           M K   ++ L    LF       + +  AS L  IK  G ++  I              G
Sbjct: 1   MRKACLLTALVCTTLFCGTALSQAQAQTASRLDRIKSAGKVRVCIWPDYYSITYRNTRTG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             +G D++  R L++ +      ++++  + K     L   + D+       T  R    
Sbjct: 61  ALEGIDIELARELAADLGVK---VEFVDSSFKTLIADLTEDKCDVSMHGIGITPAR--QE 115

Query: 115 GLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            L F  P                +++ + +    I V A   T   + D  KA   +   
Sbjct: 116 KLDFSRPHLRSGIYAITTKTNPAVATWADIDKPGIVVAAQAGT--YMVDVMKAELKQASL 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            V    E  +    + R D +  D      +   +D        P  ++ +  A A+ +G
Sbjct: 174 NVVATPEAREQEVMSGRADLFMTDYPYSRKMLARHDWAKLLAP-PTPLAPTAYAYAVAKG 232

Query: 234 DTEWYNIVS 242
           D  W + V 
Sbjct: 233 DRLWRDTVD 241


>gi|329124091|ref|ZP_08252638.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Haemophilus aegyptius ATCC 11116]
 gi|327467516|gb|EGF13014.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Haemophilus aegyptius ATCC 11116]
          Length = 239

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 83/259 (32%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAVSAQ--------------ELTFAMEPSYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QATCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 TYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 ++ R D   GD + L  +      P    +   + +K      L  A+ + + +
Sbjct: 154 NAILDLKSGRIDIILGDTAVLADMIS--KEPEIQFVGEKVTNKKYFGNGLGIAMHKSNKD 211

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 212 LAAQLNKGLAAIKANGEYQ 230


>gi|194398001|ref|YP_002036865.1| ABC transporter ATP-binding protein/ substrate-binding protein
           [Streptococcus pneumoniae G54]
 gi|194357668|gb|ACF56116.1| ABC transporter ATP-binding protein/ substrate-binding protein
           [Streptococcus pneumoniae G54]
          Length = 276

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGLLAACSGGAKKEGEAASKKEIIVATNGSPRPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   + +        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVXFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S+  + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSW 243
           G  E  + V  
Sbjct: 235 GQDELKSFVDK 245


>gi|121592680|ref|YP_984576.1| extracellular solute-binding protein [Acidovorax sp. JS42]
 gi|120604760|gb|ABM40500.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 253

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 74/224 (33%), Gaps = 13/224 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L +I+K G +  G       F   K      G++++   A+   +        +  +   
Sbjct: 24  LEEIQKSGTIILGSEGQYAPFNFFKGK-QLTGYEIEVAEAVVKKMGLKYE---WKTVGFD 79

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
                L   + D++  +   T  R  S  + F    Y  G   +  K   ++  + L+G 
Sbjct: 80  ALLTGLAQDRWDLVIASHAITDER--SKAVTFTLPHYCSGGIIVSMKP-EVAKAADLNGK 136

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            + VQ GTT    +               F   E    A  + R DA+  D     A ++
Sbjct: 137 VVAVQTGTTYLDAVKKVPGVK----DVKNFPTDEAARNALASKRVDAWVTDR--FVAKEM 190

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               P       D++    +A A+ +G+    +  +      + 
Sbjct: 191 LAKAPKAGFRTGDMLFVEQVAAAVSKGNQGLADAWNKALKEAIA 234


>gi|23502803|ref|NP_698930.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|62290805|ref|YP_222598.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82700715|ref|YP_415289.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|189025020|ref|YP_001935788.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus S19]
 gi|254690092|ref|ZP_05153346.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 6 str. 870]
 gi|254694580|ref|ZP_05156408.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 3 str. Tulya]
 gi|254696205|ref|ZP_05158033.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254700592|ref|ZP_05162420.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           suis bv. 5 str. 513]
 gi|254731123|ref|ZP_05189701.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 4 str. 292]
 gi|256258345|ref|ZP_05463881.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 9 str. C68]
 gi|256370354|ref|YP_003107865.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260546066|ref|ZP_05821806.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus NCTC 8038]
 gi|260755630|ref|ZP_05867978.1| extracellular solute-binding protein [Brucella abortus bv. 6 str.
           870]
 gi|260758855|ref|ZP_05871203.1| extracellular solute-binding protein [Brucella abortus bv. 4 str.
           292]
 gi|260760579|ref|ZP_05872922.1| extracellular solute-binding protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884655|ref|ZP_05896269.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|261214904|ref|ZP_05929185.1| extracellular solute-binding protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261751100|ref|ZP_05994809.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513]
 gi|297247188|ref|ZP_06930906.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|23348825|gb|AAN30845.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|62196937|gb|AAX75237.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82616816|emb|CAJ11910.1| Solute-binding protein/glutamate receptor:Bacterial extracellular
           solute-binding protein, family 3 [Brucella melitensis
           biovar Abortus 2308]
 gi|189020592|gb|ACD73314.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus S19]
 gi|256000517|gb|ACU48916.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260096173|gb|EEW80049.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus NCTC 8038]
 gi|260669173|gb|EEX56113.1| extracellular solute-binding protein [Brucella abortus bv. 4 str.
           292]
 gi|260671011|gb|EEX57832.1| extracellular solute-binding protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675738|gb|EEX62559.1| extracellular solute-binding protein [Brucella abortus bv. 6 str.
           870]
 gi|260874183|gb|EEX81252.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|260916511|gb|EEX83372.1| extracellular solute-binding protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261740853|gb|EEY28779.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513]
 gi|297174357|gb|EFH33704.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 281

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|271502393|ref|YP_003335419.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270345948|gb|ACZ78713.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 259

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 72/236 (30%), Gaps = 17/236 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     +      +  S          L+ G        +  + N    GFD
Sbjct: 3   MKKIILPVLALSAAILVAGCDSQNS------NEKVLRIGATGQSYPSSFKQDN-KLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      ++++  +       L++ ++D ++     T  R       F  
Sbjct: 56  VEVAETIAKDLNYK---VEWVTADFSGLMGQLEANKLDTIANVVAITPAR--QDKYNFST 110

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   + HK    I+++  L G ++    G+     L   F   +       +E  
Sbjct: 111 PYSYYGSQIVTHKDNTNINTLDDLKGKTVAGVLGSNHVNNLKKAFA--DGSVTIRTYETR 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +   +   A R + Y      L A     + P    ++ + +    +     +   
Sbjct: 169 DGAMSDALAKRVEGYINSRPILLAEINKRNLP--FKMVGEPLVVEQVGFPFHKDQN 222


>gi|297627444|ref|YP_003689207.1| polar amino acid ABC transporter, binding protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923209|emb|CBL57803.1| polar amino acid ABC transporter, binding protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 303

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 14/232 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  +    K +G L+ G++        V  +G    G D D   A+++ +     ++   
Sbjct: 49  SGQVPQKYKSKGTLEVGMDASYAPNEFVAEDGKTIVGLDADIVNAVAARLGLKTERVN-- 106

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
             +     L + S + D+ + +     +RE  + +         G  + + K        
Sbjct: 107 -ADFGTIILGVSSGKFDLGASSFTINTVREEQVNM---VQYMKAGTAWAVLKGNPKKIDV 162

Query: 142 QL-SGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
               G ++ VQ  TT    L         A       +V  +  ++ A   + + DA   
Sbjct: 163 DNVCGQTVAVQKDTTQVDDLNARSKKCTDAGQPAVTQVVEVQQSKVTADLVSGKADAMLA 222

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           D   +           +   L D+   +P    + + DT+  ++VS    ++
Sbjct: 223 DSPVINYAIQQQGD--QLERLGDMYDAAPYGLLVAKADTDMADLVSRALTSL 272


>gi|301630315|ref|XP_002944267.1| PREDICTED: glutamate/aspartate periplasmic-binding protein-like
           [Xenopus (Silurana) tropicalis]
          Length = 252

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 72/231 (31%), Gaps = 56/231 (24%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF-----DDPSKIQ 79
             L  IK  G +  G+     G      NG + GF  +    + S I       D  +I+
Sbjct: 24  DTLAKIKSSGVVTLGVRESS-GLGYTLGNGKYVGFHTEMGVRILSDILTTQLDMDKLEIK 82

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y P+ ++ R   + +  +D+   +T     R                             
Sbjct: 83  YQPVTSQNRIPLVANGTVDLECGSTXNNTAR----------------------------- 113

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                                + + +A  + +  ++ +   +        R DA+  D S
Sbjct: 114 ---------------------SPHKRADGLTFKEVMGKDHADSFLMLETGRADAFIMDGS 152

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            L A    +  P+   I+ +++S  P+A  + + D  +   V  +    + 
Sbjct: 153 ILAANISKSKNPANFKIVGEVLSIEPIACILRKDDPAFKKAVDDSIKHQIA 203


>gi|54309258|ref|YP_130278.1| putative ABC-type amino acid transport/signaltransduction system
           [Photobacterium profundum SS9]
 gi|46913690|emb|CAG20476.1| putative ABC-type amino acid transport/signaltransduction system
           [Photobacterium profundum SS9]
          Length = 217

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 85/277 (30%), Gaps = 60/277 (21%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           +      F  V  N   +GFDVD   AL   +    +K  +          AL+ K+ D 
Sbjct: 1   MEATYAPFEYVDENNQIQGFDVDLANALCKEM---DAKCSFHNQAFDSLIPALKFKRYDA 57

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
                D T  R+    ++F    Y +   F+   +  +++ + LSG  + VQ G+T +  
Sbjct: 58  AISGIDITEARQK--QVSFTNPYYDNSAAFV-AVEGKVANQAALSGKRVGVQNGSTHQSY 114

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L D           + +   ++     +  R D+  GD + +          +   +   
Sbjct: 115 LIDQMA----GVTAVPYASYQDAFIDMQNGRIDSVFGDTAVVAEWF--KKNDTLTYVGDQ 168

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
           + ++             +   V+          E  + Q N                   
Sbjct: 169 VTNQEYFG-------NGFGIAVNKK-------NEELVNQLNA------------------ 196

Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
                             + ++  G Y E+FD+  G 
Sbjct: 197 ----------------ALKTVKANGQYQEIFDKYFGK 217


>gi|85705011|ref|ZP_01036111.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. 217]
 gi|85670333|gb|EAQ25194.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Roseovarius sp. 217]
          Length = 253

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 10/214 (4%)

Query: 35  FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +K GI       FA + ++G W G++V+   A+  A           P+       +L 
Sbjct: 23  EVKIGIAAEPYPPFASLDSSGTWVGWEVEVIDAVCKAA---DLNCVITPVAWDGIIPSLT 79

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-MHKKKGISSVSQLSGASICVQA 152
             QID +  +   T  R     + F    Y      +     +  +S   L+G  + VQA
Sbjct: 80  GGQIDAIMASMSITEER--MKTIDFSDAYYNTPTVVVAGKAIEMDASPESLNGKILGVQA 137

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T  +    +YFK         +++  +E +    + R DA   D  A+     T     
Sbjct: 138 STIHQAYAQEYFKDA---AEIRIYQTQDEANQDLVSGRIDATQADSIAMADFVATEAGAC 194

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             +        + L   +  G  + ++ +     
Sbjct: 195 CEIKGNVADDPAILGLGVGAGVRKGHDALREALN 228


>gi|307330912|ref|ZP_07610045.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
 gi|306883453|gb|EFN14506.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
          Length = 317

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 77/280 (27%), Gaps = 37/280 (13%)

Query: 8   SILCLIILFFTSFSTNAS----------------ILGDIKKRGFLKCGINTGLVGFAEVK 51
           +I     L  T                       +  +I+    +K G +          
Sbjct: 21  AIAVAGALLLTGCGDQTDKATGGSNTNAAPLFNQLPKEIQSAKVIKVGSDINYPPVEFK- 79

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR- 110
            NG+  G D D   AL   +       ++           L+SK+ DI          R 
Sbjct: 80  KNGEVMGIDPDIADALGKQLGVK---FEFNNGTFDTLLSGLRSKRYDIAMSAMTDNKGRQ 136

Query: 111 ---------EISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELT 159
                    +   G+ F    +  G      K    GI +   L G  + VQ GT +   
Sbjct: 137 EGVDPDTGKKAGEGVDFVD-YFTAGVSIYTKKGANTGIKTWDDLCGKKVVVQRGTVSHDL 195

Query: 160 LAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
                    K    K     F    E     R     A + D         T+    +  
Sbjct: 196 AKSQSKTCQKNGKGKISVEAFGNDTEAQTRLRGGGAVAGSSDFPVAAYAVKTSGGGKDFE 255

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++ + +  +P   AI + +T+  + +      +V   E  
Sbjct: 256 LVGEQVEAAPYGIAIAKKNTQLRDAIKQALALIVANGEYD 295


>gi|91780176|ref|YP_555383.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91692836|gb|ABE36033.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 313

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 39/240 (16%)

Query: 4   DFFVSILCLIILFFTSFSTNASILG-------DIK------------------KRGFLKC 38
             F+S +  + +  ++ +  A+ L         I+                  K   L  
Sbjct: 9   SIFLSAIASLAMSLSTLALAANTLDLNPEQRDRIRVEKDPAAINAVGGSYRFVKDDTLTI 68

Query: 39  GINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           GI+  +   +          GFD D  + ++ ++      ++ +P+   +  LALQS + 
Sbjct: 69  GIHPFIPPISTYATDARTIVGFDADLAQVIADSLGKK---LELVPVAWADWPLALQSGKF 125

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQAGT 154
           D +  N   T  R+      F      D  GF +     I+S      ++G  I    GT
Sbjct: 126 DAVISNVTVTEERKA--KFDFS-TYRKDQLGFYVKSDSKITSLQEPKDIAGLRIITDPGT 182

Query: 155 TTELTLADYFK---AHNMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYALKLTNDR 210
             E  L ++ K   AH +K   + +   + +   A ++ R DA     +          +
Sbjct: 183 NQEKILLEWDKQNVAHGLKPITVQYYDDDAVKNLAIQSGRADAVFSVNAVQAYQAAEQRK 242


>gi|315633803|ref|ZP_07889092.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Aggregatibacter segnis ATCC 33393]
 gi|315477053|gb|EFU67796.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Aggregatibacter segnis ATCC 33393]
          Length = 239

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 80/260 (30%), Gaps = 35/260 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I     L  ++ + +A           L   +      F      G+  GFD
Sbjct: 1   MKKLLLSAI-----LLGSAVAAHAQD---------LTFAMEPSYPPFESTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +           L+SK+ D +    D T  R     + F  
Sbjct: 47  VDIANAICKEI---QATCHFKGEAFDSLITNLRSKRFDAVISAMDITEAR--GKQVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     ++ VQ GTT +       K    +Y    +  ++
Sbjct: 102 PYYDSTASYVALKGKATLENA----KNVGVQNGTTYQQYTVAETK----QYSVKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D   GD + L  +    D       + D ++           A+ + + 
Sbjct: 154 DAVLDLKNGRIDIIFGDTAVLADMISKEDN---VQFVGDKVNNKKYFGNGFGIALNKSNK 210

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E     +    A+    E  
Sbjct: 211 ELAESFNKGLAAIKANGEYQ 230


>gi|262202139|ref|YP_003273347.1| extracellular solute-binding protein family 3 protein [Gordonia
           bronchialis DSM 43247]
 gi|262085486|gb|ACY21454.1| extracellular solute-binding protein family 3 [Gordonia bronchialis
           DSM 43247]
          Length = 355

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 87/266 (32%), Gaps = 34/266 (12%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV----DFCRA 66
             ++     +   ++L  I+  G +  G+     G       NG   GFD          
Sbjct: 38  AGLVSACGSTDPRNLLDSIR-NGEVVLGVKFDQPGLGLYNPENGSVDGFDAAVSTYVVNY 96

Query: 67  LSS-AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           ++   +  DP KI +    +  R   +++ ++D+++        R  S  + F       
Sbjct: 97  IAKQQLRVDPPKITWRETPSARREAMIENGEVDVIAATYSINTAR--SKKVDFGGPYLTT 154

Query: 126 GQGFIMHKKKG-ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            QG ++ K    I +++ L+ G  +C  +G+T+   +    KA         ++      
Sbjct: 155 YQGLLVRKDDTSIDTLTDLNKGKKLCSVSGSTSAQNV----KAQLPSVQLQEYDSYSACV 210

Query: 184 AAYRAHRCDAYTGDISALYALKL-------------------TNDRPSEHVILPDIISKS 224
              R  + DA T D + L                        T+             S  
Sbjct: 211 EGLRRGKVDALTTDEAILAGYNNFWGGEFKLVEMTYLKDACVTSSGKKTLKKAGAPFSTE 270

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVT 250
                + +GDT   N V+    AM+ 
Sbjct: 271 RYGIGLGKGDTASRNAVNSALDAMLA 296


>gi|55822868|ref|YP_141309.1| ABC transporter substrate binding protein [Streptococcus
           thermophilus CNRZ1066]
 gi|55738853|gb|AAV62494.1| ABC transporter substrate binding protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 267

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 11/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  +   + L I+   +  +N+           +       +  F+    NG   G+D
Sbjct: 1   MKKIVYSITMALAIVLLVACQSNS---KHNVNTKKVVVATAGNIRPFSYQD-NGKLTGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA S  I      I +        F+ + S +  I + N  +T  R       +  
Sbjct: 57  IEVIRAASKYIKG--YDISFKITAWDSIFVGMDSGKFQIAANNLSYTKERAS--KYLYSI 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ER 178
               +    ++ K   IS +  ++G +     GT+T   + ++   H      I +  E 
Sbjct: 113 PIATNPLVLVVPKNSSISKLDDIAGKTTQDDTGTSTAKLVDEWNSKHKATPSTIEYSGED 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           V +          D    D  ++  +   N    + + L    + +         + E  
Sbjct: 173 VSKRLLDLSNGEFDYLIFDKVSVETIIKQNRYDFKVIELDTGSNPNNY-ILFSNENNELQ 231

Query: 239 NIVSWTHY 246
              +    
Sbjct: 232 RQFNQAVK 239


>gi|326334177|ref|ZP_08200400.1| hypothetical protein NBCG_05606 [Nocardioidaceae bacterium Broad-1]
 gi|325947968|gb|EGD40085.1| hypothetical protein NBCG_05606 [Nocardioidaceae bacterium Broad-1]
          Length = 272

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 1   MY--KDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M   K      + L+++         +   +++        G LK G+      +    +
Sbjct: 1   MKSLKFILAGAVTLLVILIVVSNTVETTGPSSARRSSAADDGALKIGVLDSRPVYYHEGS 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    GFD +    ++ ++   P    ++P++  + F AL +  ID+++     T  R  
Sbjct: 61  SAK--GFDYEMALGVTQSLGIKPE---FVPMDFADLFTALDAGDIDMIASQVSVTEERAE 115

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F    +     F   K   I  +  ++G  + +  GT  E  L   F        
Sbjct: 116 V--YDFSHPYFVTYLSFTTPKDSPIKKLKDVNGTRVAIVDGTAQESILKARFPKA----E 169

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +       A  + + D++  D      L  +   P E   +     K+P+A    +
Sbjct: 170 IVKRKNEAAALEAVASGKADSFFYDAPFTEGLIKSAPIPME-ERIVYPSDKAPIAFVFRK 228

Query: 233 GD 234
           GD
Sbjct: 229 GD 230


>gi|307702517|ref|ZP_07639471.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|307623929|gb|EFO02912.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 521

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 81/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +         A          +L+ G+      F             
Sbjct: 1   MKKLCLSILASLALTLGLVSQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   S      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLEDFSGAKIT-SQQGVYLYDLISQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +       P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEAMTAESANAKFKMIQPQPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+    I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDSRISQI-----NASIETISKDEQVALMDRMIKEQP 265


>gi|302393018|ref|YP_003828838.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
 gi|302205095|gb|ADL13773.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
          Length = 273

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 15/247 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILG--------DIKKRGFLKCGINTGLVGFAEVKAN 53
            K   V+IL L ++   + +T A            + K    +  G       +     N
Sbjct: 3   KKSLLVTILALTMVVAMTTATMAGFFDWLSGDGDVNKKNEKVITVGTGGTYNPWCFK-KN 61

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
              +GF+VD    ++         +++           L + +ID ++     T  R  S
Sbjct: 62  DKLQGFEVDVWNEIAKRTGYK---VEFKVSQFSGLMGMLDAGKIDTVAHQMSITPAR--S 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F     +    FI+ K     +   L G  +    G   E TL    K  N+  + 
Sbjct: 117 EKYNFTTPYAYSKYDFIIRKDSSYKTPEDLKGKKVGAWLGGNGERTLEKLNKKRNLNLNM 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +++    ++      R DA          +    +   + +     +     A   ++G
Sbjct: 177 KLYDGAP-LEKLVETGRLDACWQAAIKSQTVIEQGNLDLQLMGANTKVGTEVNAYPFVKG 235

Query: 234 DTEWYNI 240
                 I
Sbjct: 236 TDSQKII 242


>gi|167768188|ref|ZP_02440241.1| hypothetical protein CLOSS21_02744 [Clostridium sp. SS2/1]
 gi|317499095|ref|ZP_07957374.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709712|gb|EDS20291.1| hypothetical protein CLOSS21_02744 [Clostridium sp. SS2/1]
 gi|291560210|emb|CBL39010.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2]
 gi|316893615|gb|EFV15818.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 271

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 97/287 (33%), Gaps = 21/287 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    +++ +  +   + +    A  + D  K+  +K G +     +  +  +G   G
Sbjct: 1   MKKRKIFTVVLIFSILMATLAGCDKADKVSDTTKKPVIKIG-SDNYPPYNFLNEDGIPTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+        +     + + + +N +++   ++S +ID +                 +
Sbjct: 60  IDVELATEAFRRMGY---RTEIVQINWEKKKELVESGKIDCIMGCFSM---EGRLNDYRW 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFE 177
                   Q   +++   I  +S L G ++ VQ+ T  E            K  + I   
Sbjct: 114 AGPYIASRQVVAVNENSDIHKLSDLKGKNLAVQSTTKPEGIFLKRTDKRIPKLGNLISLG 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E I         DA      ++  ++   D  +   IL + +    +  A  + D   
Sbjct: 174 HRELIYTFLGKGYVDAVAVHEESI--IQYMKDYDTSFRILKEPLMVVGIGAAFAKNDDRG 231

Query: 238 Y-NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
               ++         EE+     ++  + K   +P+  ++L +D   
Sbjct: 232 ICEQMNQKL------EEMHKDGTSLKIIKKYMADPE--KYLEVDDLG 270


>gi|94993627|ref|YP_601725.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10750]
 gi|94547135|gb|ABF37181.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10750]
          Length = 528

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 7   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 58

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 59  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSSTK 115

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F    Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 116 ER--RNEISFSNSYYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 173

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 174 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 229

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 230 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 285


>gi|294851191|ref|ZP_06791864.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|294819780|gb|EFG36779.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
          Length = 281

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCTISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|218515525|ref|ZP_03512365.1| glutamine ABC transporter, substrate binding protein [Rhizobium
           etli 8C-3]
          Length = 231

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 75/232 (32%), Gaps = 9/232 (3%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +  A     + + G +  G       +     +G + GFD++    + S +     K+
Sbjct: 2   GSAAAADNPYKLIEPGVISVGTMGDAKPYTFATPDGQFTGFDIELFLNVVSRLGFPKDKV 61

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +          ++ +++ D+       T  R+ +  + F           +     GI 
Sbjct: 62  TFTGQEFSALLPSVANERFDVAVAAIGTTEARKKT--VDFSDGYLAGYLSVLTP-DAGIK 118

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             + L G  + V  GT  E+  A  F         + F       AA      DA+  D 
Sbjct: 119 DAAGLKGKRLGVVQGTLQEIYAAKNFG----GTDLVKFPDNNSAVAALNNGTIDAHFLDY 174

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               A +  +  P+  + +      +P    I +G+  +   ++   +  + 
Sbjct: 175 E--AAKQYGDRFPALKIAVNIPSFDAPAGFVIRKGNDAFRTALNGALHDAMQ 224


>gi|91785730|ref|YP_560936.1| cyclohexadienyl dehydratase [Burkholderia xenovorans LB400]
 gi|91689684|gb|ABE32884.1| cyclohexadienyl dehydratase [Burkholderia xenovorans LB400]
          Length = 265

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 76/270 (28%), Gaps = 20/270 (7%)

Query: 1   MYKDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K     +  L  +              +   S L +I  RG L+         ++  K
Sbjct: 1   MNKATLALLGVLTGVLMHAGAASAQSAGTAAAPSRLDEIIARGTLRACTTGDYKPYSFYK 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           ++G ++G D+D   +L+ ++      I+    N    F+A    + D+       TL R+
Sbjct: 61  SDGQFEGIDIDMTESLAKSLGVKTEYIKTSWSNLMNDFVA----RCDVGVGGVSPTLERQ 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNM 169
                    +                 +V         + V  G T E     YF   N 
Sbjct: 117 KRAFFTQAYMIDGKTPIVRCDDVSKYQTVAQIDQPATRVIVNPGGTNERFAKQYFPHAN- 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                V+     +     A + D    D S    L+   +     V           A  
Sbjct: 176 ---LTVYPDNVTVFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKAWL 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           + +GD  +   V    +      E      
Sbjct: 232 LPRGDVVFQQYVDQWLHLARATGEYQAISD 261


>gi|332077465|gb|EGI87926.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA41301]
          Length = 276

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAASKKEIIVATNGSPRPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + +  +   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYQMAVNNISYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S+  + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLDDVGGKSTEVVQATTSAKQLEAYNAEHTDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSW 243
           G  E  + V  
Sbjct: 235 GQDELKSFVDK 245


>gi|254452147|ref|ZP_05065584.1| cyclohexadienyl dehydratase [Octadecabacter antarcticus 238]
 gi|198266553|gb|EDY90823.1| cyclohexadienyl dehydratase [Octadecabacter antarcticus 238]
          Length = 259

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 86/244 (35%), Gaps = 12/244 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           K F +     ++      ++  S L +I   G LK G             A   + G+D+
Sbjct: 2   KFFKIVAAAALLATGAVQASAQSALDEILSGGVLKVGTTGDWNPMTMRDIATNSYVGYDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL++ +  +   I+++P + K     + S Q   ++ +   +  R  + G +    
Sbjct: 62  DVMTALANDLGVE---IEFVPTDWKTLVAGVTSGQYH-ITGSASVSPARAKAAGYSDSYF 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           +       +       +S   L+  G S+    GTT E  +  YF     +         
Sbjct: 118 SLMTVPLTLRENADRFTSWDDLNVEGVSVAATLGTTQEGQVKQYFPEATHRIVEAPARDF 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E+     + R DA          L    +     + +    S +P+A  + Q D  W N
Sbjct: 178 QEVL----SGRADASITSNIEAATLVEQYEN-LIIIPVDAGRSPTPVAMLLPQADQVWIN 232

Query: 240 IVSW 243
            V+ 
Sbjct: 233 YVNT 236


>gi|315612520|ref|ZP_07887433.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|322374942|ref|ZP_08049456.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C300]
 gi|315315501|gb|EFU63540.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|321280442|gb|EFX57481.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C300]
          Length = 521

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 81/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +         A          +L+ G+      F             
Sbjct: 1   MKKLCLSILASLALTLGLVSQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   S      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLEDFSGAKIT-SQQGVYLYDLISQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +       P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEAMTAESANAKFKMIQPQPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+    I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDSRISQI-----NASIETISKDEQVALMDRMIKEQP 265


>gi|121607336|ref|YP_995143.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121551976|gb|ABM56125.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 245

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 80/225 (35%), Gaps = 15/225 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           D K    +    +     F  V A+G   GF++D   AL   +     K + +  +    
Sbjct: 6   DAKSYKEITIATDATYPPFESVAADGQLVGFEIDLSHALCEEL---KLKCRLINASFDTL 62

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGAS 147
              L +++ D L  + +    R+    + F    Y     F+  K  GI  S + L+G +
Sbjct: 63  IPGLVTRKSDALITSMNINDERKRV--IDFTDPYYRMESRFVARKGAGIVISAAGLTGKT 120

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQAGT     +   +           ++   E      + R D + G I  +    L+
Sbjct: 121 IAVQAGTLQASYVRKVY---GDVARIKYYQGGSEPFLELLSGRADLHFGFIVQVNDSFLS 177

Query: 208 NDRPSEHVILPDIISK------SPLAPAIIQGDTEWYNIVSWTHY 246
            D      I P +  K        +A AI + D E   +++    
Sbjct: 178 KDGKDFEFIGPTLSGKDDKTLGEGVAIAIRKEDKELKALLNQGLQ 222


>gi|50119771|ref|YP_048938.1| putative amino acid-binding periplasmic protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610297|emb|CAG73741.1| putative amino acid-binding periplasmic protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 260

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 90/253 (35%), Gaps = 25/253 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   F+ I+ +  +   + +          K   L+ G++     F  +  NG+  GF
Sbjct: 1   MSRKLSFLKIVAIFAISPFACA----------KSDILRIGVDLTYPPFQSMSTNGNPSGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++   A+  +I    +K  Y+      +  AL SK+ID++      T  R+    + F 
Sbjct: 51  DIEVTDAICQSI---NAKCDYIVNTFDSQIPALLSKKIDVI-APLGVT--RKRRESIDFS 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +      +  K+  I      L G +I VQ GT  E     Y+           +  
Sbjct: 105 NYVFHAPTKLVARKEANILPNVDVLRGKNIAVQQGTIQEAYANKYWLPAG--VIVKSYPD 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            E I     + R +       AL    L + +  +  +    ++ + L     A  I + 
Sbjct: 163 QEAIYEDLYSGRVEGALCPSVALTFGFLHSPQGKDFELKGPEVTDANLFSIGSAYGIRKD 222

Query: 234 DTEWYNIVSWTHY 246
           D +   +++    
Sbjct: 223 DIKTKQLINQGLK 235


>gi|322386833|ref|ZP_08060457.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269115|gb|EFX52051.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 542

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 80/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K     +  L++   T     A          +L+ G+      F       +NG  K
Sbjct: 22  MKKFILTLLTALLVCLGTLTVAQAD--------DYLRIGMEAAYAPFNWTQDDDSNGAVK 73

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++    +      AL S +ID++      T 
Sbjct: 74  IEGTNQYANGYDVQVAKKIAQEMGKEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTA 130

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    ++   L          +   + L +      
Sbjct: 131 ERKKEIA--FSNSYYTSEPVMLVRKDGNYANAKTLKDFKDAKIT-SQQGVYLYNLISQLP 187

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  +   D Y  +       +  N +                  
Sbjct: 188 GAKQETAMGDFAQMRQALESGVIDGYISERPEALTAEAANSKFKMIQFKEGFEVGEEDAS 247

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+           A +         + ++Q+ K+  
Sbjct: 248 IAVGMRKDDSRIEQA-----NAAIAKLSTDDQVQLMDQMIKNQP 286


>gi|23100188|ref|NP_693655.1| amino acid ABC transporter substrate-binding protein
           [Oceanobacillus iheyensis HTE831]
 gi|22778420|dbj|BAC14689.1| amino acid ABC transporter substrate-binding protein
           [Oceanobacillus iheyensis HTE831]
          Length = 281

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 75/228 (32%), Gaps = 16/228 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +     +I   G +  G +  L   +  + +    GFDV+  R ++  +  D   + + 
Sbjct: 29  ASDERWEEINTSGEIVVGTSGTLFPASYYEGD-KLTGFDVEVMREVAKRLNLD---VTFE 84

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISS 139
            +       A+QS +ID+ +   + T  R+      F     +     ++ K    GI+S
Sbjct: 85  TMGVDSMLSAIQSGRIDVAANQIEPTEKRQK--EFNFSEPYKYSYTTMVVRKGDNSGINS 142

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VEEID-AAYRAHRCDAYTGD 197
           +  L G      A TT    +A++F A       + +     E         R D    D
Sbjct: 143 LEDLEGKKAGGGA-TTVYSQIAEHFGA-----EVVTYGNAPNEAYLRDVHNGRTDVVIND 196

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                           H+        +  +  I  G+T+    ++   
Sbjct: 197 YYLQKFGIAEFPEFDIHLHPELRFRTTEQSIVIPNGETKLTTEINQVL 244


>gi|315640220|ref|ZP_07895338.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
 gi|315484009|gb|EFU74487.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
          Length = 289

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 26/229 (11%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVG--FAE 49
           M K++      ++L ++ L     S+++S     +L  IK  G L  G +       F  
Sbjct: 1   MKKNWVYTSIFALLAVVTLAACGTSSSSSSTDSDVLAKIKASGKLVVGTSPDFPPSEFYI 60

Query: 50  VKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           +   G  +  G D+   +A++  I      +     +       +Q+  +DI       T
Sbjct: 61  LNDQGEKEIVGSDISLSKAIAKEIGVK---LDIKATDFNGVLANIQTGSVDIGISGFVGT 117

Query: 108 LLREISLGLAFRPITYFD----GQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLA 161
             R+  +   F      +     QG +  K+  +  SS++ L  A + V A + +     
Sbjct: 118 DERKKIM--DFSDGYEQEVSDGYQGILTTKEIAEKYSSLADLKKAKLKVGAQSGSIQY-- 173

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +         +   +  ++    A  A   DA T   +++  L  +   
Sbjct: 174 ELASGLTSTANLKQYGTMDAAVLALNAGDIDAVTVSTTSVEPLLTSFPN 222


>gi|313609881|gb|EFR85296.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL F2-208]
          Length = 471

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 94/288 (32%), Gaps = 18/288 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            ++I C+    FT    NA    +         G +T    F   + +G+  G D+D  +
Sbjct: 1   MMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEHVGIDMDILK 54

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++        K +   +       AL++ Q+D +      T  R+      F    +  
Sbjct: 55  AIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKFDFSDPYFDS 109

Query: 126 GQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           G    I+     I +   L G  + V+ GT                +  +VF+   ++  
Sbjct: 110 GVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVVFDDSAQMYD 167

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             +     A   D   L     T    +   I+ D    +    A+ +G  +        
Sbjct: 168 DVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTDKEKGNSYGFAVNKGKKQELLEKFNA 224

Query: 245 HYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
               + A  E     +N    +    N + + F+GI KSS      GL
Sbjct: 225 GLVNIKASGEYDKILENYLGDNAIKENTNEKGFMGIIKSSWPALLSGL 272


>gi|240947952|ref|ZP_04752379.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus minor NM305]
 gi|240297746|gb|EER48205.1| ABC-type amino acid transport system,periplasmic component
           [Actinobacillus minor NM305]
          Length = 240

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 86/257 (33%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   VS      + F + S  A           +   +      F      GD  GFD
Sbjct: 1   MKKLLLVS-----AMAFAACSAQA---------KDITFAMEPSYPPFELTNEKGDIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +  L       AL+ K+ID      D T  R  S  + F  
Sbjct: 47  VDVANAICKEI---QATCSFKGLAFDGLIQALKQKRIDAAISAIDITEKR--SKQVLFSE 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +     ++ VQ GTT +  +    K    +Y P  ++ ++
Sbjct: 102 PYYDSSASFIAVKGKADLTTA----KNVGVQNGTTFKEYVIAEAK----QYTPKSYDSLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238
                 +  R D   GD + L  +       +     +       + L  A+ + +TE  
Sbjct: 154 NSILDLKNGRIDLIFGDTAVLADMLKKEPELAFVGDKVTNKTYFGNGLGIAVNKSNTELA 213

Query: 239 NIVSWTHYAMVTAEELG 255
           N ++    A+    E  
Sbjct: 214 NDLNKGLAAIKANGEYQ 230


>gi|302541721|ref|ZP_07294063.1| cyclohexadienyl dehydratase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459339|gb|EFL22432.1| cyclohexadienyl dehydratase [Streptomyces himastatinicus ATCC
           53653]
          Length = 260

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 72/233 (30%), Gaps = 15/233 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDD 74
              S + + ++L  + +RG L+         F+   A  G + G D+     L+ ++   
Sbjct: 14  AANSAAVHGTLLDRVPRRGVLRVCTTGDYRPFSHRDAKTGAYTGIDISMAGNLAKSLDAK 73

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
           P   ++      +    L + + DI       TL R      AF      DG+  I+   
Sbjct: 74  P---KFTATTWAKLVDDLAAGRCDIGMGGVSVTLERAR--KAAFSEPYLTDGKTPIVRCE 128

Query: 133 --KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             KK          G  + V  G T E     + K         V      I       R
Sbjct: 129 DEKKYQTLDDIDRPGVRVVVNPGGTNEAFARAHIKRA----TLTVHPDNTTIFDEIIDGR 184

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            D    D S        +      V      S S  A A+ + D ++ + V  
Sbjct: 185 ADVMMTDASETRYQSKIHPE-LCAVHPDKPFSFSEKAYALPRSDAQFKSYVDQ 236


>gi|167826365|ref|ZP_02457836.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 9]
 gi|226193281|ref|ZP_03788891.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei Pakistan 9]
 gi|254184018|ref|ZP_04890609.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1655]
 gi|184214550|gb|EDU11593.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei 1655]
 gi|225934881|gb|EEH30858.1| cyclohexadienyl dehydratase [Burkholderia pseudomallei Pakistan 9]
          Length = 261

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 77/266 (28%), Gaps = 18/266 (6%)

Query: 1   MYKDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +       C  +            AS L D+  RG L+         +   + +G ++
Sbjct: 3   MNQTLLALACCAGLAHAQTAPQPGAPASRLDDVLARGTLRVCTTGDYKPYTYRREDGAFE 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D   +L+ ++    + ++       + F+A    + DI       TL R+    + 
Sbjct: 63  GIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQK--RVF 116

Query: 118 FRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           F      DG+  I+           +        + V  G T E     +          
Sbjct: 117 FTQPYVSDGKTPIVRCADAERYQTIAQIDQPQTRVIVNPGGTNERFAKQHLTRAK----L 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            VF     I     A   D    D S    L+   +     V           A  + +G
Sbjct: 173 TVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRG 231

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259
           D  +   V    +      EL     
Sbjct: 232 DVVFQQYVDQWLHLARETGELRAISD 257


>gi|152977982|ref|YP_001343611.1| extracellular solute-binding protein [Actinobacillus succinogenes
           130Z]
 gi|150839705|gb|ABR73676.1| extracellular solute-binding protein family 3 [Actinobacillus
           succinogenes 130Z]
          Length = 262

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +   S+L  I  +G +  G       F    A+G   G+DV+  RA++  +      + +
Sbjct: 22  AAADSLLDRINNKGTISVGTEGTYAPFTYHDASGKLTGYDVEVTRAVAEKLGVK---VDF 78

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISS 139
                      L++ + D+++     T   E            + G    +      I +
Sbjct: 79  KETVWDSMMAGLKAGRFDMVANQVALT-TPERRAIFDKSEAYSWSGAMMAVRADDDSIKT 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  + G     Q+ T+    LA   +A       +  + + +     +  R D       
Sbjct: 138 LEDIKGRK-AAQSLTSNYGELAREKQA-----QIVPVDGLAQSLLVVQQKRAD--LTLND 189

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPL---APAIIQGDTEWYNIVSWTH 245
           +L  L      P+  +  P              + +G+ E    +S   
Sbjct: 190 SLAILDYLKKNPNAGLKTPWEAPAEEKLGSGLIVNKGNDEALAKISAAI 238


>gi|313124773|ref|YP_004035032.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312281336|gb|ADQ62055.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 486

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 14/226 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKG----FDVDFCRALSSAIFDDPSKIQYLPL 83
                +     G +     F     +G + G     D++  R ++     +  K +   +
Sbjct: 29  AQAASKKTYIIGTDQTFKPFEIQGKDGTYNGKNPGIDIEILREIAK---HENFKYELKIM 85

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +      ALQS QID +      T  R+ +  + F    Y DG    + K   I+S+  L
Sbjct: 86  SFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSYYTDGVCLAVAKDSKITSMKDL 143

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ V+ GTT+ +      K +        +       A  +A   DA   D     +
Sbjct: 144 KGKTVNVKTGTTSAIYAKSIQKKYGF--RLKYYTNSNTSWADVKAGNADACFDDGP---S 198

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           L+      +   I+   +S +PLA A+ +G+ +    +     A +
Sbjct: 199 LRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMFNDGLAWL 244


>gi|153809860|ref|ZP_01962528.1| hypothetical protein RUMOBE_00241 [Ruminococcus obeum ATCC 29174]
 gi|149834038|gb|EDM89118.1| hypothetical protein RUMOBE_00241 [Ruminococcus obeum ATCC 29174]
          Length = 288

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 83/277 (29%), Gaps = 16/277 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--VKANGDWK-- 57
            K   + I  ++ +     +     +  +   G L    +     +    +  +G+    
Sbjct: 4   KKITAIMIGAVMAVSMAVPAMADDKVETVTD-GKLTVATSPDFAPYEFYSIDEDGNPTLS 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  + ++  +  +   +    ++       L  K +D+          R  +  + 
Sbjct: 63  GFDMDLAQYIADKMGLELEVVP---MDFDGVLSELSQKNVDLGMAGLSPDPAR--ADAME 117

Query: 118 FRPITYFDGQGF--IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F  + Y  GQ F  +  K     ++   +     + A T +     D    +      + 
Sbjct: 118 FSDLYYKGGQSFVTVKDKADQFKTLEDANNKDYSIGAQTGSIQL--DLANENTPDADIVS 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +V +I       + D    + +   A     + P   ++          A  + +G+ 
Sbjct: 176 LPKVTDIITELLTGKMDGAFIETA--VAESYQKNYPDLEIVCDVPYDTEGSAIGVAKGNE 233

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
                V+      +    +     +  +++   T   
Sbjct: 234 ALLKAVNEAIADAIDDGSIDKFVADATELAAGQTYEG 270


>gi|260169373|ref|ZP_05756184.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|261758894|ref|ZP_06002603.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99]
 gi|261738878|gb|EEY26874.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99]
          Length = 281

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEVAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|226364611|ref|YP_002782393.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226243100|dbj|BAH53448.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 237

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 71/215 (33%), Gaps = 7/215 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L+ G       F      G+  GFDV+F RA++  +    S + Y   +    F A
Sbjct: 4   ETRVLRVGSALPDPPFEFRDG-GEPAGFDVEFTRAVARELGLAWSLVPYRGTDFNGIFDA 62

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L   + D ++  T  T  R          +           +  G+  V  L G ++ VQ
Sbjct: 63  LADGEFDCIASGTTVTPERRARADFCAPYLVSGQSLAVDTARHPGVRGVDDLRGLTVGVQ 122

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTND 209
            G T++  + D   A        V+      +      +  CDA          L     
Sbjct: 123 HGNTSQPIV-DRLVAQGRAGAIRVYAYDRIGQALDDLSSGGCDAVMKLAPV---LTWLVR 178

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                 ++   IS+  +A A+  GD    + +   
Sbjct: 179 DRPHVEVVERGISREEIAVAVRTGDQGLRDRIESA 213


>gi|169627382|ref|YP_001701031.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC
           19977]
 gi|169239349|emb|CAM60377.1| Probable amino acid ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 481

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 17/271 (6%)

Query: 36  LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L+ G       F+      G+  G+DVD  RA+   +      ++++ +     F  L +
Sbjct: 26  LRVGTEGVYAPFSFHDGHTGELTGYDVDVARAVGEKLG---RPVEFVEIPWDAIFAGLDA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D+++     T  R+                  +       I S+S + G  +  +  
Sbjct: 83  ERFDVVANQVTITPARKA--KYDISTPYAVGEGVIVTRADDNSIHSLSDVRG-KVAAENA 139

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T+    +A    A          E   +        R D    D  A+YA   +   P+ 
Sbjct: 140 TSNWSQIARDAGAR-----VEAVEGFTQSITLLSQGRVDVVINDSIAVYAYLASTGDPAV 194

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            +             A  +      ++               I+QK +   +  TT P  
Sbjct: 195 KIAGATGQRSE-QGFAARKNSGLLPDLDKALDQLAADGTLTRISQKYLKTDASGTTKPQA 253

Query: 274 QRFLGIDKSSNIGEALGLTKDW-TYRIIRHM 303
            +  G   S+     L L   W   R +  +
Sbjct: 254 GK--GDSGSTRSDTQLVLDNLWPMARAMITV 282


>gi|121599398|ref|YP_994629.1| cyclohexadienyl dehydratase [Burkholderia mallei SAVP1]
 gi|124385170|ref|YP_001027561.1| cyclohexadienyl dehydratase [Burkholderia mallei NCTC 10229]
 gi|126450519|ref|YP_001082541.1| cyclohexadienyl dehydratase [Burkholderia mallei NCTC 10247]
 gi|167000135|ref|ZP_02265958.1| cyclohexadienyl dehydratase [Burkholderia mallei PRL-20]
 gi|254174778|ref|ZP_04881439.1| cyclohexadienyl dehydratase [Burkholderia mallei ATCC 10399]
 gi|254357432|ref|ZP_04973706.1| cyclohexadienyl dehydratase [Burkholderia mallei 2002721280]
 gi|121228208|gb|ABM50726.1| cyclohexadienyl dehydratase [Burkholderia mallei SAVP1]
 gi|124293190|gb|ABN02459.1| cyclohexadienyl dehydratase [Burkholderia mallei NCTC 10229]
 gi|126243389|gb|ABO06482.1| cyclohexadienyl dehydratase [Burkholderia mallei NCTC 10247]
 gi|148026496|gb|EDK84581.1| cyclohexadienyl dehydratase [Burkholderia mallei 2002721280]
 gi|160695823|gb|EDP85793.1| cyclohexadienyl dehydratase [Burkholderia mallei ATCC 10399]
 gi|243063939|gb|EES46125.1| cyclohexadienyl dehydratase [Burkholderia mallei PRL-20]
          Length = 261

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 80/268 (29%), Gaps = 20/268 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M  +  +  L        + +       AS L D+  RG L+         +   + +G 
Sbjct: 1   MKMNQTLLALACCAGLAHAQTAPQPGTPASRLDDVLARGTLRVCTTGDYKPYTYRREDGA 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++G D+D   +L+ ++    + ++       + F+A    + DI       TL R+    
Sbjct: 61  FEGIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQK--R 114

Query: 116 LAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
           + F      DG+  I+           +        + V  G T E     +F       
Sbjct: 115 VFFTQPYVSDGKTPIVRCADAERYQTIAQIDQPQTRVIVNPGGTNERFAKQHFTRAK--- 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
              VF     I     A   D    D S    L+   +     V           A  + 
Sbjct: 172 -LTVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVP 229

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259
           +GD  +   V    +      EL     
Sbjct: 230 RGDVVFQQYVDQWLHLARETGELRAISD 257


>gi|199597031|ref|ZP_03210464.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|258538744|ref|YP_003173243.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|199592164|gb|EDZ00238.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|257150420|emb|CAR89392.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus Lc 705]
          Length = 270

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 27/260 (10%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAE 49
           M K    F + ++ L+    T+ ++ +S            I K   L  G+      F+ 
Sbjct: 1   MLKKKLWFLLPLVALVTFTLTACTSASSDTSKNSDVTAELINKN-ELTIGLEGTYAPFSY 59

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G  +GF+V+  +AL+  I       +++P         L S++ D++  +   T  
Sbjct: 60  R-KDGKLEGFEVELGKALAKKIGVKA---KFVPTQWDSLIAGLGSQKFDLVLNDISETPA 115

Query: 110 REISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R+      F     +     I       I S++ + G +     GT           A  
Sbjct: 116 RKKV--YNFTTPYMYSRYALITRSDNTTIKSLADIKGKTFVEGTGTPNAAL------AKK 167

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--L 226
                          +  +  R D      +A YA    N                P  +
Sbjct: 168 YGAKITPSGDFTVSLSLVKEKRADGTINASAAWYAFAKNNSTAGLKSQTLKDSVVKPDEV 227

Query: 227 APAIIQGDTEWYNIVSWTHY 246
           A  + +   +    +S    
Sbjct: 228 AGMVSKKSPKLQAALSKGIQ 247


>gi|315446796|ref|YP_004079675.1| amino acid ABC transporter substrate-binding protein, PAAT family
           ;amino acid ABC transporter membrane protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|315265099|gb|ADU01841.1| amino acid ABC transporter substrate-binding protein, PAAT family
           ;amino acid ABC transporter membrane protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 598

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       + ++G + GFD +  RA++  +     +I ++          + 
Sbjct: 88  GTLTVGTLSDAPPSICIDSSGQFTGFDNELLRAVADRLG---LRINFVGTEFSGLLAQVA 144

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152
           S++ D+ S +   T  R  ++G  F     F     ++ K   I+   +L+ G  I V  
Sbjct: 145 SRRFDVGSSSITTTDARRQTVG--FTNGYDFGYFSLVVPKGSPITGFDELTAGQRIGVVQ 202

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D  K       P+ F     + A+ +  + DA+     +  A         
Sbjct: 203 GTVQEAYVIDTLK-----LQPVKFPDYNTVYASLKTGQIDAWVS--PSQQAQGTVQPADP 255

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +I       + +A A+   +    + ++    A++ 
Sbjct: 256 VEIIENTFSLDNFIAWAVASDNQPLIDALNSGLDAVIA 293


>gi|134294250|ref|YP_001117985.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134137407|gb|ABO53150.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 262

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 69/217 (31%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NGD +GFD+D   A+           +++  +      AL+ 
Sbjct: 28  TLRFGLEAQYPPFESKAPNGDLQGFDIDVGNAVCERA---KLTCKWVETSFDGLIPALKG 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           ++ D ++   + T  R     + F  I Y      I     G+      L G  + V   
Sbjct: 85  RKFDAINSAMNATEQR--RQAIDFTTIIYRVPTQLIARTGSGLLPTPDALKGKRVGVLQA 142

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     +++   +    + ++   +  A   A R DA      A     L+      
Sbjct: 143 SIQETYAKAHWEPAGVS--VVAYQDQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKG 200

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      +    
Sbjct: 201 FAFVGQPVRDDRILGSGIAFGLRKGDDALKTKLDAAI 237


>gi|307710415|ref|ZP_07646854.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
 gi|307618827|gb|EFN97964.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
          Length = 521

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 83/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLDDFNGAKIT-SQQGVYLYDLIAQIT 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|306828881|ref|ZP_07462073.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304429059|gb|EFM32147.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 520

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +         A          +L+ G+      F             
Sbjct: 1   MKKLCLSVLASLALTLGLVSQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L+  S      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLNDFSGAKIT-SQQGVYLYDLISQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +       P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAESANAKFKMIQPQPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+    I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDSRISQI-----NASIETISKDEQVALMDRMIKEQP 265


>gi|238896103|ref|YP_002920839.1| putative ABC-type amino acid transport/signal transduction systems
           periplasmic component [Klebsiella pneumoniae NTUH-K2044]
 gi|238548421|dbj|BAH64772.1| putative ABC-type amino acid transport/signal transduction systems
           periplasmic component [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 282

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 14/249 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             +++   + L   +    A  +  I+  G LK G+       A   A G+ +G+DVD  
Sbjct: 30  MRLTVGLALTLAIMTCGAQARDMQSIEHSGELKVGVPGDYAPLAFRNAAGELQGYDVDMA 89

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R L   +     K+ ++  +       LQ+ + DI       T  R  +  L+   +   
Sbjct: 90  RDLGRTLG---LKVSFVYTSWPALAADLQADKFDIAMGGVTETPARAQAFALSHPVVANG 146

Query: 125 DGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                       + S+         + V  G T +  + ++ K        I  +   + 
Sbjct: 147 KIALANCQAAPRLGSLEKIDRPDVKVIVNPGGTNQSFVDEHIKQA----QIIRVQNNVDN 202

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEWYN 239
             A R    D    D   +      +  P         P   + S     + + +     
Sbjct: 203 LQALRQKTADMMVTD--LIEGDYYQSKEPGVFCVANETPFAGTASNKVYMMSKDNPALLE 260

Query: 240 IVSWTHYAM 248
            V+    + 
Sbjct: 261 KVNQWLDSQ 269


>gi|152965192|ref|YP_001360976.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
 gi|151359709|gb|ABS02712.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
          Length = 322

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 71/280 (25%), Gaps = 44/280 (15%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL------------------------------GDIK 31
            + F  ++  L +L  T+    +  L                                ++
Sbjct: 23  RRPFLGALGALAVLGLTAAGCGSDSLSGGTSSETTSGSASAAPSGSADAALRAMLPQSVQ 82

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L+ G N        ++ +   KG D+D   A+++ +        +   +       
Sbjct: 83  DSGKLRVGTNAEYAPNEFLEGS-TIKGMDIDVMNAVAAKLGVTAE---FSNASFDSLITG 138

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +   + D    +      R+    +          Q                 G ++ VQ
Sbjct: 139 VSGNRYDAAISSFTINDERK--QAVNMVQYYNAGTQWATKAGNPEGIDPEDACGKTVAVQ 196

Query: 152 AGTTT-----ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           + TT               A   +   + FE  ++   A    R  A   D         
Sbjct: 197 SSTTQSDDDLPARQQACTAAGKPQIQVLAFESQQDATNALLQGRAQAMLADSPIAAYAVK 256

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    ++ DI   +P    + +  T     +S    
Sbjct: 257 QTQG---LELVGDIYDAAPYGIVVPKDQTATAEAISKALQ 293


>gi|221202173|ref|ZP_03575208.1| cyclohexadienyl dehydratase [Burkholderia multivorans CGD2M]
 gi|221208766|ref|ZP_03581765.1| cyclohexadienyl dehydratase [Burkholderia multivorans CGD2]
 gi|221171398|gb|EEE03846.1| cyclohexadienyl dehydratase [Burkholderia multivorans CGD2]
 gi|221177967|gb|EEE10379.1| cyclohexadienyl dehydratase [Burkholderia multivorans CGD2M]
          Length = 258

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 80/267 (29%), Gaps = 21/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M      +I    +L     +       S L D+  RG L+         ++  + +G +
Sbjct: 1   MK--TLATIAAAAMLCCAGAAQAEGAGASRLDDVLARGTLRVCTTGDYKPYSYYRTDGRF 58

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D+D   +L+ ++   P  ++     +     A    + DI       TL R+     
Sbjct: 59  EGIDIDMAESLAKSLGVKPDYVK----TSWSNLTADFVAKCDIAVGGVSTTLERQK--RA 112

Query: 117 AFRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F      DG+  I+         +          + V  G T E     YF   N    
Sbjct: 113 FFTQPYVVDGKTPIVRCSDVDKYQTVAQIDRPETRVIVNPGGTNERFAKQYFTHAN---- 168

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             V+     I     A + D    D S    L+   +     V           A  + +
Sbjct: 169 LTVYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPR 227

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259
           GD  +   V    +  ++  E      
Sbjct: 228 GDVVFQQYVDQWLHLALSTGEYQAISD 254


>gi|153952630|ref|YP_001398265.1| amino acid-binding protein [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152940076|gb|ABS44817.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 256

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 73/245 (29%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL+  +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKIAKIDLIMSSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +   K  I+++  L   G  + ++ G+T  L      K         +F +
Sbjct: 101 PYAKANLAILTPLKSDIANIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFNK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +GD    
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALK 216

Query: 239 NIVSW 243
           + +  
Sbjct: 217 DKLDN 221


>gi|282856549|ref|ZP_06265823.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
 gi|282585615|gb|EFB90909.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
          Length = 519

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 81/253 (32%), Gaps = 22/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANG--DWK 57
           M     + +  L  L F S S  A  +   + + G    G + G V F     +      
Sbjct: 1   MKTKPKIGVAALATLLFASCSFAAEFMPDKVLRWG----GNSEGGVPFILYDPSEPEKLT 56

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+ +   AL++ +   P  +Q +          LQ +  DI     + T  R     + 
Sbjct: 57  GFETEIAAALAAKMGLKPQFVQNV---WDILIPGLQRRLYDIAINGIEVTPER--QETIN 111

Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      ++ K     +S++    G +I    G+    TLA    A         
Sbjct: 112 FSIPYYVTYLQMVVPKGNPAGVSTLENARGHTIGTLRGSYAYETLAKAGIA-----DIRS 166

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +E         +  R DA   D          N        + + I +   A  I +G+ 
Sbjct: 167 YENEATAYQDMQNGRLDAVVMDAPMSIYYSQFNP---MFEFVGEPIGRMEYAMTIRKGEE 223

Query: 236 EWYNIVSWTHYAM 248
            +   V+    A+
Sbjct: 224 AFLKRVNEAIVAL 236


>gi|322388544|ref|ZP_08062146.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Streptococcus infantis ATCC
           700779]
 gi|321140662|gb|EFX36165.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate-binding protein [Streptococcus infantis ATCC
           700779]
          Length = 280

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 79/258 (30%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGF-------LKCGINTGLVGFAEVKA 52
           M K   + S+  L ++     +  +         G        +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGEKKDAASGEATSGKKEIVVATNGSPKPFIY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   +++        F  L S +  +   N  +T  R  
Sbjct: 60  NGELTGYEIELVRAIFKD--SDKYTVKFEKTEWSGIFPGLDSDRYQMAVNNLSYTKERAE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                +   T  +    ++ K    I S+  + G S  V  GTT+   L  Y   H    
Sbjct: 118 --KYLYAAPTAKNPNVLVVKKDDTSIKSLDDIGGKSTEVVQGTTSAKQLEAYNTEHADNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I +     + D    D        + N       ++     + P    
Sbjct: 176 TILNYTKADFQQIMSRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E    V     
Sbjct: 235 LLAKGQDELKAFVDKRIQ 252


>gi|307710224|ref|ZP_07646667.1| L-cystine-binding protein tcyA [Streptococcus mitis SK564]
 gi|307618986|gb|EFN98119.1| L-cystine-binding protein tcyA [Streptococcus mitis SK564]
          Length = 276

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 14/254 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLIAAGVLAACSGGAKKEGEAASKKEIIVATNGSPKPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S++ + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLADIGGKSTEVVQATTSAKQLEAYNAEHPDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + +
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAK 234

Query: 233 GDTEWYNIVSWTHY 246
           G  E  + V     
Sbjct: 235 GQDELKSFVDKRIQ 248


>gi|170697811|ref|ZP_02888897.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170137313|gb|EDT05555.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 250

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 72/217 (33%), Gaps = 17/217 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             +   +A           L  G +T  + F   + +  + GFD+D    ++        
Sbjct: 16  LGASLAHADTQA-------LVVGTDTSFMPFEFKQGD-KYVGFDLDLWAEIAKDQGWKY- 66

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
                P++      ALQ++ ID+          R+ ++  +  P         +      
Sbjct: 67  --TIQPMDFAGLIPALQTQNIDVALSGMTIREERKKAIDFS-APYYDSGLAAMVQSGNTT 123

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+  L+G  I  + GT T     D+ KAH        F  +++   A  A R DA   
Sbjct: 124 IKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNIDQAYLALEAGRVDA-AM 178

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +      + N+   +  +    +S         +G
Sbjct: 179 HDTPNVLFFVNNEGKGKVKVAGQPVSGDKYGIGFPKG 215


>gi|307320803|ref|ZP_07600213.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306893513|gb|EFN24289.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
          Length = 294

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 80/244 (32%), Gaps = 16/244 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
            +  A +   +K  G +             V     + KG D+D   AL+  +    + +
Sbjct: 35  SANAAGLPERVKSAGKVVVANQPNYPPMEYVDPATNELKGVDIDLGVALAKELG---TTV 91

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKG 136
           ++  +  ++   +LQ+ ++D++         R     L F       G  F     +K  
Sbjct: 92  EWSNIGFEQMISSLQTGRVDLIHSGMSDLPKR--RDTLDFID-YMKSGAQFYTSFARKGE 148

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHN-----MKYHPIVFERVEEIDAAYRAHRC 191
             +++   G ++ +   T+     A +  A+           +  E   +  A  +  R 
Sbjct: 149 FKTLTDFCGKTVGMSRRTSFPDETAKWSAANCEAKGLPAIKVVGTEGSADARAQLKQGRL 208

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DA       L  L         + ++ +  +         + DTE  +  +    A++ +
Sbjct: 209 DAAVQGSETLPYLMDLEKD--TYAVVGEPFTVVYQGIGFAKKDTELRDAYAAALKALMES 266

Query: 252 EELG 255
            E  
Sbjct: 267 GEYK 270


>gi|330013200|ref|ZP_08307587.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|328533567|gb|EGF60286.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 282

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 14/249 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             +++   + L   +    A  +  I+  G LK G+       A   A G+ +G+DVD  
Sbjct: 30  MRLTVGLALTLAIMTCGAQARDMQSIEHSGELKVGVPGDYAPLAFRNAAGELQGYDVDMA 89

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R L   +     K+ ++  +       LQ+ + DI       T  R  +  L+   +   
Sbjct: 90  RDLGRTLG---LKVSFVYTSWPALAADLQADKFDIAMGGVTETPARAQAFALSHPVVANG 146

Query: 125 DGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                       + S+         + V  G T +  + ++ K        I  +   + 
Sbjct: 147 KIALANCQAAPRLGSLEKIDRPDVKVIVNPGGTNQSFVDEHIKQA----QIIRVQNNVDN 202

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEWYN 239
             A R    D    D   +      +  P         P   + S     + + +     
Sbjct: 203 LQALRQKTADMMVTD--LIEGDYYQSKEPGVFCVANETPFAGTASNKVYMMSKDNPALLE 260

Query: 240 IVSWTHYAM 248
            V+    + 
Sbjct: 261 KVNQWLDSQ 269


>gi|325526520|gb|EGD04080.1| extracellular solute-binding protein [Burkholderia sp. TJI49]
          Length = 279

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 76/260 (29%), Gaps = 18/260 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI--KKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M   F + IL   +    +   + SI        +  L   I      F           
Sbjct: 1   MKATFLIRILSAAVFGAAALHASFSIAQSAPAAAKRTLNVAIVPNYPPFEYKDPATDKLA 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL++ +    +K+ ++  +  +   A+ ++++D++         R     + 
Sbjct: 61  GFDVDLGEALAAKMG---AKLNWVETSFDQMMSAVATQRVDMILSGMTDLPTR--RDAVT 115

Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELT-----LADYFKAHNMK 170
           F       G  F   K        ++ L G  +     T+           +  KA    
Sbjct: 116 FVD-YIETGPQFYTLKTRAAEFPQMNALCGKRVGSSRRTSFPDNTTAWSAENCVKAGKPA 174

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              I  +   +     R +R DA       L            +  +            +
Sbjct: 175 IVVIGTDGSADARMQLRQNRIDAAVQGGETLPYQNSLEQN--AYAPVGKPFLSQYTGIGV 232

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            + +T   + ++     ++ 
Sbjct: 233 AKNNTALSSALTTALNQLIA 252


>gi|551811|gb|AAA23971.1| argT [Escherichia coli]
          Length = 146

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 14/159 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L L++   T+ S+ A +         ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSIL--ALSLLVGLSTAASSYAPLPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+   +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKSTAIISSLSVTDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTEL 158
             Y      I  K   I      L G  + V  G+T E 
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEA 146


>gi|197119596|ref|YP_002140023.1| substrate-binding histidine kinase [Geobacter bemidjiensis Bem]
 gi|197088956|gb|ACH40227.1| periplasmic substrate-binding histidine kinase [Geobacter
           bemidjiensis Bem]
          Length = 609

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 83/259 (32%), Gaps = 29/259 (11%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  +  +G   G++VD  +A++  +     K+++   +  E    LQ 
Sbjct: 66  TIVVGGDRSYPPYEFIDKDGRPAGYNVDLTKAIAEVMG---MKVEFRFGSWAEMRAGLQQ 122

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            +I+IL      +   E S  + F P            +    + ++ +L G  + V   
Sbjct: 123 GKINILQG---LSYSDERSRSVDFSPPHAMVHHAIFARRDSKRVRTLEELKGKKVIV--- 176

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPS 212
              +  + +  K        ++     E      + + D A    +  +Y ++      +
Sbjct: 177 -FQDGIMHERLKLLGFGKDLVLTPTPAEALRLLASGQYDYAVVAQLPGMYLIREL--HLT 233

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
             V +   +        + +G+ E     +     ++   +                   
Sbjct: 234 NLVPVAKAVVSEQYGYGVAKGNKELLTRFNEGLAIVIKTGQYA---------------QI 278

Query: 273 VQRFLGIDKSSNIGEALGL 291
             R+LG+ +   +   + L
Sbjct: 279 YNRWLGVHEPPRVTREMAL 297


>gi|145221452|ref|YP_001132130.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145213938|gb|ABP43342.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium gilvum PYR-GCK]
          Length = 598

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       + ++G + GFD +  RA++  +     +I ++          + 
Sbjct: 88  GTLTVGTLSDAPPSICIDSSGQFTGFDNELLRAVADRLG---LRINFVGTEFSGLLAQVA 144

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           S++ D+ S +   T  R  ++G  F     F     ++ K   I+   +L +G  I V  
Sbjct: 145 SRRFDVGSSSITTTDARRQTVG--FTNGYDFGYFSLVVPKGSPITGFDELVAGQRIGVVQ 202

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D  K       P+ F     + A+ +  + DA+     +  A         
Sbjct: 203 GTVQEAYVIDTLK-----LQPVKFPDYNTVYASLKTGQIDAWVS--PSQQAQGTVQPADP 255

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +I       + +A A+   +    + ++    A++ 
Sbjct: 256 VEIIENTFSLDNFIAWAVASDNQPLIDALNSGLDAVIA 293


>gi|186472701|ref|YP_001860043.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia phymatum STM815]
 gi|184195033|gb|ACC72997.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia phymatum STM815]
          Length = 284

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 82/283 (28%), Gaps = 18/283 (6%)

Query: 1   MYKDFFVSILCLIILFFTS------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M       +L    L          F++  + L  I++ G ++ G       FA  + +G
Sbjct: 1   MKSKRTSVMLGAFCLAAAGLTMHTQFASAETTLQRIQRTGEVRIGY-ANEAPFAYTQPDG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G   +  R +   +      +  +          L++ + D+++     T  R   +
Sbjct: 60  KVTGESPEISRKIFEKLGVKK--VDAVLTEWGSLIPGLRAGRFDVIAAGMYITPERCKQV 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             A       D    +    K + S   ++       A  +  + +A+   A       +
Sbjct: 118 AFADPQYQIQDTLLVMKGNPKNLHSYGDIAKQPDIKLAVMSGAVEVANSRDAGVKDGQLL 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQ 232
                     A R  R DA  G    +  L   +    E       D       A A   
Sbjct: 178 QVPDTTAQLQAVRTRRADAAAGTALTMKGLASKDAGQVETVSTFKDDPKHTGYGALAFRP 237

Query: 233 GDTEWYNIVSWTHYAMVTA-------EELGITQKNINQVSKDT 268
            DT+  + V+   +  +         E  G  + N+   +   
Sbjct: 238 EDTDLRDAVNKQLHQWLGTPDHLATVEPFGFDKTNLTTKTAAD 280


>gi|15900370|ref|NP_344974.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116516213|ref|YP_815922.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|149023738|ref|ZP_01836218.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|14971923|gb|AAK74614.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116076789|gb|ABJ54509.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|147929675|gb|EDK80667.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
          Length = 521

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 40/287 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+    +AF    Y      ++ K        S+   +GA I  Q G      +A    
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKSLDDFNGAKITSQQGVYLYNLIAQIPG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  A   DAY  +       +  N +     + P   +   
Sbjct: 168 AKKET----AMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEE 223

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
              +A  + + D     I      A +           ++++ K+  
Sbjct: 224 DTAIAIGLRKNDNRISQI-----NASIETISKDDQVALMDRMIKEQP 265


>gi|227523476|ref|ZP_03953525.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus hilgardii ATCC 8290]
 gi|227089371|gb|EEI24683.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus hilgardii ATCC 8290]
          Length = 271

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 79/260 (30%), Gaps = 26/260 (10%)

Query: 1   MY-----KDFFVSI-LCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAE 49
           M      K F +++ +    +  T+  ++ S        ++K+   L  G+      ++ 
Sbjct: 1   MKIGKGIKRFALTLGVVATGVLLTACGSSNSSSKGGYTSELKQSKQLTIGLEGTYAPYSY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            +  G   GF+VD  +A++  +        ++P         L S + D++  N   T  
Sbjct: 61  RQG-GKLTGFEVDLGKAVAKKMNLKA---NFVPTKWDSLIAGLGSSKYDVVLNNIAETPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R+      F     +     I       I  +S + G  +    GT  E       +A  
Sbjct: 117 RKK--SYIFSTPYIYSRYALITKASDKSIQKLSDVKGKKLAEGTGTNNE------AQAKK 168

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--L 226
           +    +         A  R  R         A +A   +N                P  +
Sbjct: 169 LGAKIVPSGDFTTTLALIRQGRVQGTINAREAWFAYAKSNSTKGLTYHKISDSQAEPVNI 228

Query: 227 APAIIQGDTEWYNIVSWTHY 246
           +    Q DT+     +    
Sbjct: 229 SAMFNQKDTKIKAKFNKVLQ 248


>gi|289168650|ref|YP_003446919.1| ABC transporter permease and substrate-binding protein, amino acid
           transport [Streptococcus mitis B6]
 gi|288908217|emb|CBJ23059.1| ABC transporter permease and substrate-binding protein, amino acid
           transport [Streptococcus mitis B6]
          Length = 521

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    +    L+         +   + L D  +   
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLVVKKDSTYAKAKNLNDFDGAKIT-SQQGVYLYDLIEQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SP 225
                       ++  A  A   DAY  +     AL          +I P+   K     
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERP--EALTAEVANSKFKMIKPETEFKTGEED 224

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
            A AI     +          A +           ++++ K+  
Sbjct: 225 TAIAIGLRKDDNRI---SQINASIETISKDDQVALMDRMIKEQP 265


>gi|212213034|ref|YP_002303970.1| arginine-binding protein [Coxiella burnetii CbuG_Q212]
 gi|212011444|gb|ACJ18825.1| arginine-binding protein [Coxiella burnetii CbuG_Q212]
          Length = 269

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 9/199 (4%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     +K         +  +  +G  +GF  D  +A+   +    +             
Sbjct: 37  VFATDTIKFATEATYPPYVYMGPSGQVEGFGADIVKAVCKQM---QAVCTISNQPWDSLI 93

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASI 148
            +L+  + D L    + T  R+    + F    Y +   FI  K K ++ S   L G  I
Sbjct: 94  PSLKLGKFDALFGGMNITTARQK--EVDFTDPYYTNSVSFIADKNKPLTLSKQGLKGKII 151

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            VQ GTT +  L D F           +   E+      + R D   GD   +      N
Sbjct: 152 GVQGGTTFDSYLQDSF---GNSITIQRYPSEEDALMDLTSGRVDGVVGDTPLIKQWLKQN 208

Query: 209 DRPSEHVILPDIISKSPLA 227
            R    +I   +   +   
Sbjct: 209 GRREYVLIGKPVNDPNYFG 227


>gi|157415086|ref|YP_001482342.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386050|gb|ABV52365.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747728|gb|ADN90998.1| Putative glutamine binding periplasmic protein [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315931174|gb|EFV10147.1| amino acid-binding protein [Campylobacter jejuni subsp. jejuni 327]
          Length = 256

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 74/241 (30%), Gaps = 26/241 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKTGRASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  +++P   +      A+ +G+ E  
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILVPFQENPEFWGIAVQKGNAELK 216

Query: 239 N 239
            
Sbjct: 217 K 217


>gi|325474446|gb|EGC77633.1| amino acid ABC transporter [Treponema denticola F0402]
          Length = 279

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 91/274 (33%), Gaps = 22/274 (8%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNAS----------ILGDIKKRGFLKCGINTGLVG 46
           M K+    F +S L L  +         +           L  I  +  L  GI      
Sbjct: 1   MKKNPNHIFKLSFLFLFTVLVMISCKPKAVRIQKKENDISLAKILVKKELIIGIRDDHPP 60

Query: 47  FAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           F+ +       +G+D++  + L + +   P    +  +   +R   L+  +ID +     
Sbjct: 61  FSVLNLFTTKMEGYDIEVAQELCNRMKIKP---IFKVIKWDQRESLLKDGEIDCIWSAFV 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           ++   +    L             ++  K    S+  +    I + + +  + +L     
Sbjct: 118 YSKESDEIYSL--TSPYIKSAIILVVKDKSPYYSIQDIREKKIGITSSSFIQESLKKAES 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           +  +  + +VF+  +E   A      +    D+ ++  L  T      + +L + I+   
Sbjct: 176 SLGVFTNTVVFQNAQEAINALEKDEVECVVYDLLSINNLIQTRKGS--YRVLDEAIAYEE 233

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              A  + D    N V  T   M   + L  T K
Sbjct: 234 YVIAFRKEDIALMNAVESTLEEMAKTDFLEKTSK 267


>gi|300767622|ref|ZP_07077532.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|300494607|gb|EFK29765.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
          Length = 496

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 80/292 (27%), Gaps = 38/292 (13%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K      + +  L   F       A                +T    F      G +K
Sbjct: 19  MRKWQVAVVMLLAALGSWFAIGTQAQAKTY---------TIATDTTFAPFEFQVKGGKYK 69

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D  +A++     +    +   L+       L + Q+D +    + T  R+      
Sbjct: 70  GIDIDILKAIAKK---ENFNYKLKALSFGAAVQQLSANQVDGVIAGMNITAERK--QTFD 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G    + K   + +   L G ++ ++ GT            +  K     F 
Sbjct: 125 FSDAYYTSGVVMAVAKDSKVKTFKDLKGKTVALKTGTAGATYAKSIQSKYGFK--IKYFN 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +    +     A   D   +              I+           A+ +G    
Sbjct: 183 DSNNMYNDVKVGNSAACFEDYPVM---SYGIKNGIALKIVSKQHEAGDYGFAVKKGK--- 236

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD-VQRFLGIDKSSNIGEA 288
                        AE L      +  +  D T    + ++L   ++S  GE 
Sbjct: 237 ------------NAELLKKFNAGLKAIKADGTYKKIINKYLKSSEASLTGED 276


>gi|152971509|ref|YP_001336618.1| hypothetical protein KPN_02982 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956358|gb|ABR78388.1| hypothetical protein KPN_02982 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 282

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 14/249 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             +++   + L   +    A  +  I+  G LK G+       A   A G+ +G+DVD  
Sbjct: 30  MRLTVGLALTLAIMTCGAQARNMQSIEHSGELKVGVPGDYAPLAFRNAAGELQGYDVDMA 89

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R L   +     K+ ++  +       LQ+ + DI       T  R  +  L+   +   
Sbjct: 90  RDLGRTLG---LKVSFVYTSWPALAADLQADKFDIAMGGVTETPARAQAFALSHPVVANG 146

Query: 125 DGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                       + S+         + V  G T +  + ++ K        I  +   + 
Sbjct: 147 KIALANCQAAPRLGSLEKIDRPDVKVVVNPGGTNQSFVDEHIKQA----QIIRVQNNVDN 202

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEWYN 239
             A R    D    D   +      +  P         P   + S     + + +     
Sbjct: 203 LQALRQKTADMMVTD--LIEGDYYQSKEPGVFCVANETPFAGTASNKVYMMSKDNPALLE 260

Query: 240 IVSWTHYAM 248
            V+    + 
Sbjct: 261 KVNQWLDSQ 269


>gi|149912069|ref|ZP_01900660.1| Putative amino acid ABC transporter, periplasmic amino
           acid-bindingportion [Moritella sp. PE36]
 gi|149804865|gb|EDM64902.1| Putative amino acid ABC transporter, periplasmic amino
           acid-bindingportion [Moritella sp. PE36]
          Length = 250

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 88/249 (35%), Gaps = 21/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + + +     +                 +K G++     F     N   +GF+
Sbjct: 1   MKKLLLAAAMLVSTTLTSVAYAQE----------TIKVGMSGNYFPFTFS-KNDQLQGFE 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     + SK++++ +N    F  L++ +ID +S     T  R      AF  
Sbjct: 50  VDLWEEIAKR---NDSKVEFITVNFSGLFGMLETGRIDTISNQVTITPARTA--KYAFSQ 104

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   ++ K    I+ +S L+  ++ V  G+      AD  + ++   +  +    
Sbjct: 105 TYVYDGAQVVVKKGNTEINGISDLANKTVGVNLGS----NFADLLRKYDTNNNITIKTYD 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I+      R DA+  D  +   L   +  P +         ++ +     +   E   
Sbjct: 161 TGIERDVALGRTDAFVMDRLSSLELINKSPLPLQLAGPTFETIENAMPFLKTEKQEELRL 220

Query: 240 IVSWTHYAM 248
            V+    +M
Sbjct: 221 KVNAILDSM 229


>gi|120406977|ref|YP_956806.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119959795|gb|ABM16800.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 598

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 80/218 (36%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       + + G + GFD +  +A++  +     ++ ++          + 
Sbjct: 88  GTLTVGTLSDAPPSICIDSAGQYTGFDNELLKAVAEKLG---LRVNFVGTEFSGLLAQVA 144

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           +++ D+ S +   T  R  ++G  F     F     ++ K   I+   +L  G  I V  
Sbjct: 145 ARRFDVGSSSITTTDARRRTVG--FTNGYDFGYFSLVVPKGSAITGFEKLAPGQRIGVVQ 202

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ F     + A+ +  + DA+    S      +    P+
Sbjct: 203 GTVQEAYVIDTL-----GLQPVKFPDYNTVYASLKTGQIDAWVAP-SQQAQGTVQPGDPA 256

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + +        + +A A+   +    + ++    A++ 
Sbjct: 257 DIIE-NTFSLDNFIAWAVAGDNQPLIDALNSGLDAVIA 293


>gi|159186457|ref|NP_395945.2| deoxyfructosyl-amino acid transporter periplasmic binding protein
           [Agrobacterium tumefaciens str. C58]
 gi|5257496|gb|AAD41365.1|AF151698_2 GlnH-like protein [Agrobacterium tumefaciens str. C58]
 gi|159141517|gb|AAK90386.2| Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein
           [Agrobacterium tumefaciens str. C58]
          Length = 277

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 78/244 (31%), Gaps = 9/244 (3%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
              + L +L   +    A     +     +  G       +A   A+G++ GFD++    
Sbjct: 18  AIAVTLGVLAGAATPALADNPLGLIDPTTISVGTMGDAKPYAFTTADGNFTGFDIELFLN 77

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +     ++ +          ++ + + D+ +     T  R+ +  + F        
Sbjct: 78  VAGRLGFKKEQVVFTGQEFSALMPSVANGRFDVAAAAIGTTAKRKET--VDFSDGYLAGF 135

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              +   + GI+  + L G  + V  GT  E+     F         + F       +A 
Sbjct: 136 LSVLT-SEAGITDAAGLKGKRLGVVQGTLQEIYAEKNFA----GTDLVKFPDNNSAVSAL 190

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                DA+  D     A   +   P+  + +      +P    I +G+    N +     
Sbjct: 191 NNGTVDAHFLDFE--AAKDYSARYPALKIAVNIPSFDAPAGFVIRKGNDALRNALDKGLK 248

Query: 247 AMVT 250
             + 
Sbjct: 249 EAMQ 252


>gi|55820391|ref|YP_138833.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822277|ref|YP_140718.1| amino acid ABC transporter substrate binding protein [Streptococcus
           thermophilus CNRZ1066]
 gi|116627220|ref|YP_819839.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|55736376|gb|AAV60018.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738262|gb|AAV61903.1| amino acid ABC transporter substrate binding protein, putative
           [Streptococcus thermophilus CNRZ1066]
 gi|116100497|gb|ABJ65643.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
 gi|312277700|gb|ADQ62357.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           ND03]
          Length = 282

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWKG 58
            K   ++ + +  +   +  ++ S     K  G    +          F+  + NG+  G
Sbjct: 4   KKILGITGVAIASVALLAACSSKSPKEASKSSGAKETINFATVGTTAPFSY-EENGELTG 62

Query: 59  FDVDFCRALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +DV+    ++ A+F D    ++++        F  L S +  +   N       E +   
Sbjct: 63  YDVE----VAKAVFKDSDKYEVKFQKTEWSSVFTGLDSAKYQMAGNNIS--YSEERAQKY 116

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F            + K   I     ++G S  V  GTTT   L ++   H+ K   + +
Sbjct: 117 LFSYPIGTTPAVLTVPKDSNIKKYDDIAGHSTQVVQGTTTATQLTEFNDKHSDKPVELNY 176

Query: 177 ERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQG 233
                 ++  +    + D    D   + A  + N++ S    +     + P         
Sbjct: 177 TNENITQMLTSLNEGKYDFKIFDAPTVNA-IIKNNKLSNLKTIELKSDEQPYIYFLFADN 235

Query: 234 DTEWYNIVSWTH 245
             +    V+   
Sbjct: 236 QKDLQKFVNKRL 247


>gi|322375331|ref|ZP_08049844.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C300]
 gi|321279594|gb|EFX56634.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C300]
          Length = 721

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  +F    +          K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKILAYLLILFPIFSLGMA----------KADTVKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+QS Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQSGQADAIMAGMTKTKERE--NVFTMSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+   +LSG ++ V+ GT  +  L      +        F+  +
Sbjct: 106 TYYDTKVVIATTKANKITKYEELSGKTVGVKNGTAAQRFLESIKDKYGFS--IKTFDTGD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +  A   +A   D   +         
Sbjct: 164 LMNNSLSAGAVNAIMDDKPVIEYAINQGQD 193



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 10/190 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               ++    F    ++  + G D+D  +A++     +   I+           A+Q+ Q
Sbjct: 270 IIASDSSFAPFVFQNSSNQYTGIDMDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQ 326

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+ +    F    Y       + +   I+S   L   ++ V+ GT +
Sbjct: 327 ADGIIAGMSVTDARKET--FDFSESYYTANTILGVKESSTIASYEDLKDKTVGVKNGTAS 384

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSE 213
           +  L +    +  K     F     +  +      DA   D        +       P  
Sbjct: 385 QTFLTENQSKYGYK--IKTFADGASMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIA 442

Query: 214 HVILPDIISK 223
              + +    
Sbjct: 443 GTPIGETAFA 452


>gi|322387247|ref|ZP_08060857.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
 gi|321141776|gb|EFX37271.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
          Length = 543

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 81/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +         A          +L+ G+      F             
Sbjct: 23  MKKLCLSILASLALTLGLVSQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 74

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 75  IDGTNQYANGYDVQIAKKIAKDLGKEPLIVK---TKWEGLVPALTSGKIDMIIAGMSPTA 131

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   S      +   + L D     +
Sbjct: 132 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKTLDDFSGAKIT-SQQGVYLYDLISQIS 188

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +       P   +      
Sbjct: 189 GAQKETAMGDFAQMRQALEAGVIDAYVSERPEALTAESANAKFKMIQPEPGFKTGEEDTS 248

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D     I      A +           ++++ K+  
Sbjct: 249 IAIGLRKDDERISQI-----NASIETITKEEQVALMDRMIKEQP 287


>gi|148979437|ref|ZP_01815521.1| cyclohexadienyl dehydratase precursor [Vibrionales bacterium
           SWAT-3]
 gi|145961796|gb|EDK27090.1| cyclohexadienyl dehydratase precursor [Vibrionales bacterium
           SWAT-3]
          Length = 254

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 83/231 (35%), Gaps = 11/231 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +  A  L DI+K G L+ G       F+       + G+D+D  + ++  +  +   ++
Sbjct: 17  GAAQADQLEDIQKSGTLRVGTTCDYKPFSYFDGK-SYSGYDIDVAQHIAEQLGVE---LK 72

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +    K+    L   + DI        + R+++       +T+         K +  +S
Sbjct: 73  IVRTTWKDLLTDLDDDKYDIAMGGITRKMQRQLNAEQTQGYMTFGKCFLVAKGKAEQYNS 132

Query: 140 VS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +    LS   + V  G T E+    +  AH        +E   ++  A    + D    +
Sbjct: 133 IEKVNLSSVRVGVNIGGTNEM----FADAHLQNASFTRYENNLDVPQAVAEGKVDVMVTE 188

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                  ++T++R  E        + S     I +G+    N V++    M
Sbjct: 189 TPEGLFYQVTDER-LEAARCETPFTNSQFGYLIPKGEQRLLNTVNFIMDEM 238


>gi|27382314|ref|NP_773843.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27355485|dbj|BAC52468.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 273

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 78/253 (30%), Gaps = 15/253 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
           K   V+   L  +  ++ +    +  DI KRG LK  +                  GFD+
Sbjct: 4   KRLLVTAAFLGAMTVSALAIE--LPPDIAKRGSLKVALVPNYPPMEFRDPATSALTGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   AL   +      I++   +  E   ++ + ++D +         R      +F   
Sbjct: 62  DLGEALGRKLGVK---IEWTETSFAEFMPSISTGRVDAILSGFTDYASR--HEIASFVDY 116

Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                + F+   +      ++ L G  +     T     + D +   N   +PI F   +
Sbjct: 117 LRSGPKFFVQQSRASEFKDMAALCGKKVGASRRTMFPAEI-DKWSQKNCGSNPIQFVGTD 175

Query: 181 ---EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +     R  R DA       L  L      P  +  + D  +      A+   +   
Sbjct: 176 GSADARTQLRQGRIDAAVQGNETLPYLMDL--EPGTYAPVGDPFATQFTGIALPVKEKAL 233

Query: 238 YNIVSWTHYAMVT 250
              +     A++ 
Sbjct: 234 QQAILEAVDALIA 246


>gi|303259211|ref|ZP_07345189.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae SP-BS293]
 gi|303260967|ref|ZP_07346916.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae SP14-BS292]
 gi|303263294|ref|ZP_07349217.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae BS397]
 gi|303265459|ref|ZP_07351359.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae BS457]
 gi|303267983|ref|ZP_07353785.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae BS458]
 gi|301801111|emb|CBW33784.1| ABC transporter, substrate binding protein [Streptococcus
           pneumoniae INV200]
 gi|302637804|gb|EFL68290.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae SP14-BS292]
 gi|302639629|gb|EFL70086.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae SP-BS293]
 gi|302642679|gb|EFL73024.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae BS458]
 gi|302644899|gb|EFL75146.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae BS457]
 gi|302647067|gb|EFL77291.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae BS397]
          Length = 276

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAASKKEIIVATNGSPRPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYNVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S+  + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSW 243
           G  E  + V  
Sbjct: 235 GQDELKSFVDK 245


>gi|256059926|ref|ZP_05450111.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           neotomae 5K33]
 gi|261323896|ref|ZP_05963093.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261299876|gb|EEY03373.1| extracellular solute-binding protein [Brucella neotomae 5K33]
          Length = 281

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAERYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|15902190|ref|NP_357740.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae R6]
 gi|116517098|ref|YP_815669.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae D39]
 gi|148983559|ref|ZP_01816878.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148996583|ref|ZP_01824301.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149001740|ref|ZP_01826713.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|149005908|ref|ZP_01829637.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|149011027|ref|ZP_01832332.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|149017831|ref|ZP_01834290.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483798|ref|ZP_02708750.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|168486069|ref|ZP_02710577.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|168492380|ref|ZP_02716523.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|168576411|ref|ZP_02722294.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae MLV-016]
 gi|169833332|ref|YP_001693678.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|225855931|ref|YP_002737442.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae P1031]
 gi|225860190|ref|YP_002741699.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649766|ref|ZP_04524018.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CCRI 1974]
 gi|237821464|ref|ZP_04597309.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230827|ref|ZP_06964508.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255041|ref|ZP_06978627.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298501961|ref|YP_003723901.1| amino acid ABC superfamily transporter ATP-binding protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|307066842|ref|YP_003875808.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|307126379|ref|YP_003878410.1| amino acid ABC transporter substrate-binding protein [Streptococcus
           pneumoniae 670-6B]
 gi|15457687|gb|AAK98950.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae R6]
 gi|116077674|gb|ABJ55394.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae D39]
 gi|147757158|gb|EDK64197.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147760198|gb|EDK67187.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147762264|gb|EDK69225.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147764663|gb|EDK71593.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147923706|gb|EDK74818.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147931395|gb|EDK82373.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168995834|gb|ACA36446.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|172042869|gb|EDT50915.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|183570865|gb|EDT91393.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183573442|gb|EDT93970.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|183577802|gb|EDT98330.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae MLV-016]
 gi|225725075|gb|ACO20927.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae P1031]
 gi|225727562|gb|ACO23413.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237556|gb|ADI68687.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301799316|emb|CBW31851.1| extracellular solute-binding protein [Streptococcus pneumoniae
           OXC141]
 gi|306408379|gb|ADM83806.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|306483441|gb|ADM90310.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae 670-6B]
 gi|327390567|gb|EGE88907.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA04375]
 gi|332076601|gb|EGI87063.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA17545]
          Length = 276

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAASKKEIIVATNGSPRPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S+  + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSW 243
           G  E  + V  
Sbjct: 235 GQDELKSFVDK 245


>gi|308068845|ref|YP_003870450.1| Probable amino-acid ABC transporter extracellular binding protein
           ytmK precursor [Paenibacillus polymyxa E681]
 gi|305858124|gb|ADM69912.1| Probable amino-acid ABC transporter extracellular binding protein
           ytmK precursor [Paenibacillus polymyxa E681]
          Length = 283

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 6/205 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M K F +  +  IIL      ++ +        G    +  G  T       +  NG+  
Sbjct: 1   MKKWFAILSVMAIILVLAGCGSSDNESSASGSSGDVKKIIVGTGTQFKNVCFIDENGNLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDV+  + L   +     + ++  ++     L+L + +ID++S   +    RE      
Sbjct: 61  GFDVELIKELDKRL--PQYEFEFKTMDFGNLLLSLDAGKIDLVSHQMEKNPEREAKYLFN 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             P + F  +  +      I S+  L G  +     +     L +Y K H    + +   
Sbjct: 119 KNPYSIFLNRVAVAKDNNTIHSIDDLKGKKVLTSPTSNAAYVLKEYNKTHGDALNIVYTS 178

Query: 178 RVE-EIDAAYRAHRCDAYTGDISAL 201
               +      + R DA      A 
Sbjct: 179 GAANDTVQQITSGRIDATVTTDFAN 203


>gi|228476498|ref|ZP_04061188.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|228251919|gb|EEK10965.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
          Length = 515

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 30/288 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG------ 54
           M K        L+++F    S  A          +L+ G+      F   + +       
Sbjct: 1   MKKIIIACFAALLLVFGGVSSAQADE--------YLRVGMEAAYAPFNWTQDDNSNGAVP 52

Query: 55  -----DWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ A    P  ++           AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQIAKKIAEAQGKKPLVVK---TAWTGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R     + F    Y      ++      ++   L              + L +      
Sbjct: 110 ER--RQEIDFSDSYYRSEPVMVVSSDGDYANAKSLKDFKDAKITAQQG-VYLYNLIDQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI----LPDIISKS 224
                        +  A  +   D Y  +       +  + +     +            
Sbjct: 167 GVSKQTAMGDFGAMRQALASGIIDGYVSERPEAKTAEEASSKYKMITLKDGGFQVSDDDV 226

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
            LA  + +GD++    V+     +   E + +    IN    D T+  
Sbjct: 227 SLAVGLRKGDSQQMEQVNKVLAGISQEERVKLMDHIINIQPADKTDEA 274


>gi|170699700|ref|ZP_02890736.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170135400|gb|EDT03692.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 266

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 22/199 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGF 59
           M      +   L +L   S                L+ GI+      F    + G WKG+
Sbjct: 5   MSSRVRRAAAALFMLGVASVYAAQPT---------LRVGIDAESYPPFFSKDSTGKWKGW 55

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D    L +A      + +   +       ALQ+++ID++  +   T  R+    + F 
Sbjct: 56  EIDV---LDAACGKLNVRCELSDIAWDGLIPALQNRKIDVIWSSMTITGERQK--AIDFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
              Y     F+  K                  I V+AGT     L   FK          
Sbjct: 111 RAYYESPTVFVGAKSDRRRIDCAVPATFKDRVIGVEAGTNFSAFLDARFK---RDAQIKA 167

Query: 176 FERVEEIDAAYRAHRCDAY 194
           F++ +   A   + R D  
Sbjct: 168 FDKFDNALADLVSGRVDYV 186


>gi|159904536|ref|YP_001548198.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159886029|gb|ABX00966.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 252

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 11/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+    + +  + ++ F+      +      + G L  GI   +     +  +    GF+
Sbjct: 1   MFNSKTLILSMIFLILFSGCIEGENSDKTTIQEGILTIGIAPDIYPIVYL-EDNVPTGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +   P    +          A++S +ID        T  RE    + F  
Sbjct: 60  IDLITEIARRMNLKPE---FKIYKFSSLLEAVKSNEIDFAVAFITITPERET--QVDFSR 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      ++      S +  L    I V AG+T E  +  +    NM++  I++E + 
Sbjct: 115 CYFETYTTILVRDDDKYSGIKGLENRKIGVLAGSTHESLMEGF--KDNMEFELILYENIR 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+     +   DA            + N+ P     +   +  + +   I   + +  N 
Sbjct: 173 EMHYDLLSGNIDAEV-FEYVCSKDFIDNNDPV--KAIGGKMDINYIGIPINDENHDLRNK 229

Query: 241 VSWTH 245
           ++   
Sbjct: 230 INDVI 234


>gi|225026584|ref|ZP_03715776.1| hypothetical protein EUBHAL_00834 [Eubacterium hallii DSM 3353]
 gi|224956076|gb|EEG37285.1| hypothetical protein EUBHAL_00834 [Eubacterium hallii DSM 3353]
          Length = 302

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 90/263 (34%), Gaps = 38/263 (14%)

Query: 1   MYKDFFVSILCLIIL-------------FFTSFSTNASILGDIKKRGFLKCGINTGLVGF 47
           M K   + ++ ++ +               ++ + + S    I+ +G L  GI       
Sbjct: 17  MKKIIAMLLVLVMSVTGLVGCGSSKGNEAGSTSAGSDSDWAYIQDKGKLTVGITL-FAPM 75

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                     GFD +   A++  +  D   +++  +N   + + L SK ID +      T
Sbjct: 76  NYYNEKNKLVGFDTEMAEAVTKKLGID---VEFTEINWDSKEVELSSKNIDCIWNGMCIT 132

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL------- 160
             R+ ++ +       ++ Q  +M K +    +  + G ++  + G+T E  +       
Sbjct: 133 EERKQNMSI--SDPYLYNTQAMVMKKSREKEIMKSVKGLTVTAEQGSTGEGKIDGSIADD 190

Query: 161 -------ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                   DYFK  N     +  + + +     ++   D    D      +       S+
Sbjct: 191 DTVKVSAQDYFKDANY----VASDSMAKALMEVKSGTADVALVDSVCALGMVGEGTDYSD 246

Query: 214 HVI-LPDIISKSPLAPAIIQGDT 235
            VI + +   +     A  +G  
Sbjct: 247 LVINMDNNFGQQEYGIAFRKGSD 269


>gi|28377653|ref|NP_784545.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254555834|ref|YP_003062251.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308179813|ref|YP_003923941.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270486|emb|CAD63388.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254044761|gb|ACT61554.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308045304|gb|ADN97847.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 478

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 80/292 (27%), Gaps = 38/292 (13%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K      + +  L   F       A                +T    F      G +K
Sbjct: 1   MRKWQVAVVMLLAALGSWFAIGTQAQAKTY---------TIATDTTFAPFEFQVKGGKYK 51

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D  +A++     +    +   L+       L + Q+D +    + T  R+      
Sbjct: 52  GIDIDILKAIAKK---ENFNYKLKALSFGAAVQQLSANQVDGVIAGMNITAERK--QTFD 106

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G    + K   + +   L G ++ ++ GT            +  K     F 
Sbjct: 107 FSDAYYTSGVVMAVAKDSKVKTFKDLKGKTVALKTGTAGATYAKSIQSKYGFK--IKYFN 164

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               +    +     A   D   +              I+           A+ +G    
Sbjct: 165 DSNNMYNDVKVGNSAACFEDYPVM---SYGIKNGIALKIVSKQHEAGDYGFAVKKGK--- 218

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD-VQRFLGIDKSSNIGEA 288
                        AE L      +  +  D T    + ++L   ++S  GE 
Sbjct: 219 ------------NAELLKKFNAGLKAIKADGTYKKIINKYLKSSEASLTGED 258


>gi|225350858|ref|ZP_03741881.1| hypothetical protein BIFPSEUDO_02432 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158314|gb|EEG71556.1| hypothetical protein BIFPSEUDO_02432 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 315

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 67/227 (29%), Gaps = 13/227 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       +  +G    GFDVD  +AL+     +         N  
Sbjct: 67  DYVTKDGKLTIGMDTSYAPAEFLAEDGKTPVGFDVDIAKALAQVFGLEADP---ETANFD 123

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 124 SIIPSVGS-KYDIGISSFTVTKER--LEAVDFVSHFDAGSAWAVKKGNPNKIDTSDLCGK 180

Query: 147 SICVQAGTTTE----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ  T  E                K   I  +   ++       + D +  D     
Sbjct: 181 KVAVQTATMQETEANKIAKQCEADGKDKLEVISSKLQTDVTTNVVTGKADVFYADSP--V 238

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           A         +  +L  +   +P    I +GD++    V      ++
Sbjct: 239 AGYAIAQTDGQLEMLGKVEGVAPEGIVIKKGDSQMDEAVQKAVQKLI 285


>gi|146340753|ref|YP_001205801.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. ORS278]
 gi|146193559|emb|CAL77576.1| Cyclohexadienyl dehydratase precursor [Includes: Prephenate
           dehydratase (EC 4.2.1.51); Arogenate dehydratase (EC
           4.-.-.-)] [Bradyrhizobium sp. ORS278]
          Length = 273

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 14/233 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64
             ++  +  L   + +  AS L +I +RG L+ G+      F  +  A G + GFDVD  
Sbjct: 21  LSAVALVCGLAAQALADQASRLDEIMQRGALRVGMTGDYKPFTYLDKATGKFSGFDVDMA 80

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL  A+      ++++P +  +     ++ + D+       TL  +      F      
Sbjct: 81  EALGKAMGVK---VEFVPTSWPQLMKDFEADKFDVAMGGVSITL--DRQKKGFFSTPIMR 135

Query: 125 DGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +G+  I            +     G  + V  G T E       KA        V     
Sbjct: 136 EGKTPIARCSDTGKYQTLADIDRPGTRVVVNPGGTNERFARANIKAA----DIRVHPDNV 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            I         D    D S     +  +      V        S  A  + + 
Sbjct: 192 TIFDEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYWLQRD 244


>gi|317481627|ref|ZP_07940662.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916917|gb|EFV38304.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 270

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 17/223 (7%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           L  +K+ G +          F+   +   +  G+DV+  +A++  +        +   + 
Sbjct: 37  LEQVKQAGKIVFATEGTYAPFSYHDSKTNELTGYDVEVAKAIAKEVGIKAE---FAEGSF 93

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQL 143
                 + +K+ D ++     T  R+      F     +     I  K+    ++S   +
Sbjct: 94  DSLLAGVDAKKYDTVADQISATDERKA--KYDFSEPYTYSYGVVITSKENPKNVTSFDDV 151

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G         T         +        +      +   A  + R D        L A
Sbjct: 152 KGLRAAE----TGTSNWNKTAQEKG--ATIVQVNDFGQQVDAITSGRAD--VSLNDGLAA 203

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPA-IIQGDTEWYNIVSWTH 245
           L     +P   + +     K+P A     +G  +    V+   
Sbjct: 204 LDYLKQKPDADIKIAAKSEKTPAAYLPFRKGSDDLVKEVNKAI 246


>gi|296454520|ref|YP_003661663.1| family 3 extracellular solute-binding protein [Bifidobacterium
           longum subsp. longum JDM301]
 gi|296183951|gb|ADH00833.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. longum JDM301]
          Length = 270

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 17/223 (7%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           L  +K+ G +          F+   +   +  G+DV+  +A++  +        +   + 
Sbjct: 37  LEQVKQAGKIVFATEGTYAPFSYHDSKTNELTGYDVEVAKAIAKEVGIKAE---FAEGSF 93

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQL 143
                 + +K+ D ++     T  R+      F     +     I  K+    ++S   +
Sbjct: 94  DSLLAGVDAKKYDTVADQISATDERKA--KYDFSEPYTYSYGVVITSKENPKNVTSFDDV 151

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G         T         +        +      +   A  + R D        L A
Sbjct: 152 KGLRAAE----TGTSNWNKTAQEKG--ATIVQVNDFGQQVNAITSGRAD--VSLNDGLAA 203

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPA-IIQGDTEWYNIVSWTH 245
           L     +P   + +     K+P A     +G  +    V+   
Sbjct: 204 LDYLKQKPDADIKIAAKSEKTPAAYLPFRKGSDDLVKEVNKAI 246


>gi|153853975|ref|ZP_01995308.1| hypothetical protein DORLON_01299 [Dorea longicatena DSM 13814]
 gi|149753357|gb|EDM63288.1| hypothetical protein DORLON_01299 [Dorea longicatena DSM 13814]
          Length = 277

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 87/271 (32%), Gaps = 30/271 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---------------ILGDIKK--RGF-LKCGINT 42
           M K     ++C  ++        +                   DIK   +G  LK G   
Sbjct: 1   MKKKLVAVMMCAAMVAMLGVGCGSKSSDDSSSKSETKKTLTEDDIKDSMKGVKLKVGTTG 60

Query: 43  GLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
               F+    +G    G+D+D    L   +           ++      +L   ++D+ +
Sbjct: 61  LFGPFSYYDEDGKTLIGYDLDLINDL-QDLLGFEIDGGIQAMDYSALTTSLAENKLDMGA 119

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELT 159
                T  R+  +   F  I    GQ  +++K     I SV  L G  + V+ GT +   
Sbjct: 120 AALCATDERKEVMK--FSDIYCDSGQVVMVNKSNDEGIKSVDDLKGKKVAVEKGTASHTY 177

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
            +     +       V + +     +    + DA   D         T    +  V+  +
Sbjct: 178 AS----KNLSDADLEVHDTITTAYESLEQKKVDAVIQDGPGANFYIKTTPDSNLEVVGDE 233

Query: 220 IIS-KSPLAPAIIQGDTEWYNIVSWTHYAMV 249
               ++P     I  + ++Y+ ++     ++
Sbjct: 234 FNQGQAPY-CVAISKECKYYDEINAAVKVLI 263


>gi|320547997|ref|ZP_08042278.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320447343|gb|EFW88105.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 523

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 88/291 (30%), Gaps = 31/291 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K        L++LF    S +A          +L+ G+      F       +NG   
Sbjct: 1   MKKLLLSCFAALLLLFGGMTSIHADE--------YLRVGMEAAYAPFNWTQDDDSNGAVP 52

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ ++  +   ++           AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQIAKKIADSLGKELLVVK---TTWTGLIPALTSGKIDMIAAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ KK   +  + L       +  +   + L +      
Sbjct: 110 ERKKEIA--FSDSYYTSSPVIVVSKKGDFAQATSLKDF-AGAKLTSQQGVYLYNLIDQIK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-----ALYALKLTNDRPSEHVILPDIISK 223
                       ++  A  +   D Y  +                    +        S 
Sbjct: 167 DASKETAMGDFNQMRQALESGIIDGYVSERPDAISAENANSDFKMVAFEDGKGFATSKSD 226

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           + +A  + + DTE    V+    ++   + L +    I +   D ++ +  
Sbjct: 227 TAIAVGLRKNDTETLAKVNAVLASISDDDRLALMDDMIEKQPADNSSDNTN 277


>gi|237752094|ref|ZP_04582574.1| periplasmic glutamine-binding protein [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376661|gb|EEO26752.1| periplasmic glutamine-binding protein [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 260

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 33/263 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MY+    S+L   I F  S           K+   L          F   + + ++KG D
Sbjct: 1   MYRLILSSVLATFISFGLSGC---------KEDEKLVVATAAEFPPFEFKEGS-EYKGVD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++  +  +   ++   +       A+ S   D  +        R       F  
Sbjct: 51  MDISKEIAKRLGKE---LEIKDMEFDSVMSAVSSGNADFAASGLTINETRLKV--ADFTK 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQL------------SGASICVQAGTTTELTL---ADYFK 165
             Y   Q  ++  +       +             +G  I VQ  TT         D+  
Sbjct: 106 PYYNANQVVVIKSENAELKAVKNNAEALIDAISKKNGIKIGVQTSTTGAFFAKGDKDWGF 165

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                     F       +A    + D    D       KL +   +   +LP  +++  
Sbjct: 166 VGFPNAEVKSFVNGSLAISALVNGQVDLVILDE---APAKLISKANAGTEVLPITLTQEQ 222

Query: 226 LAPAIIQGDTEWYNIVSWTHYAM 248
              A+ +G+ E  + ++    AM
Sbjct: 223 YGVAVKKGNKELLDSINGALEAM 245


>gi|161523291|ref|YP_001578303.1| prephenate dehydratase [Burkholderia multivorans ATCC 17616]
 gi|189351937|ref|YP_001947565.1| prephenate dehydratase [Burkholderia multivorans ATCC 17616]
 gi|160340720|gb|ABX13806.1| Prephenate dehydratase [Burkholderia multivorans ATCC 17616]
 gi|189335959|dbj|BAG45029.1| prephenate dehydratase [Burkholderia multivorans ATCC 17616]
          Length = 258

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 80/267 (29%), Gaps = 21/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M      +I    +L     +       S L D+  RG L+         ++  + +G +
Sbjct: 1   MK--TLATIAAAAMLCCAGAAQAEGAGASRLDDVLARGTLRVCTTGDYKPYSYYRTDGRF 58

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D+D   +L+ ++   P  ++     +     A    + DI       TL R+     
Sbjct: 59  EGIDIDMAESLAKSLGVKPDYVK----TSWSNLTADFVAKCDIAVGGVSTTLERQK--RA 112

Query: 117 AFRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F      DG+  I+         +          + V  G T E     YF   N    
Sbjct: 113 FFTQPYVVDGKTPIVRCGDVDKYQTVAQIDRPETRVIVNPGGTNERFAKQYFTHAN---- 168

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             V+     I     A + D    D S    L+   +     V           A  + +
Sbjct: 169 LTVYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPR 227

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259
           GD  +   V    +  ++  E      
Sbjct: 228 GDVVFQQYVDQWLHLALSTGEYQAISD 254


>gi|81428667|ref|YP_395667.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610309|emb|CAI55358.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Lactobacillus sakei subsp. sakei 23K]
          Length = 487

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 76/233 (32%), Gaps = 15/233 (6%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDP 75
           + S     +  ++ +  L  G +     +             G D+D  + ++  +    
Sbjct: 27  AVSAAGQTVSRVQAKKTLVLGTSPDYAPYEFLVNKNGKNKTVGMDIDVAQKVADDL---H 83

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+    ++     + L++ ++D++      T  R  +  + F  + Y  GQ  +++K  
Sbjct: 84  VKLVIKSMDFDALLVGLETGKVDMVISAMSPTDER--TKSVDFSDVYYLGGQSILVNKAD 141

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                S +   G  + VQ G+  +       K            +V ++  A ++H+ D 
Sbjct: 142 AKIYKSKNSFIGKKVGVQTGSLQQTLAKKQIK----NAQITGLTKVPDLVLALKSHKIDG 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
              +     A    +    +     ++ +     A A  +         + + 
Sbjct: 198 IVAEEPVATAYASNDPELVQIDGKFNLGADMQGSAIAFPKNSPTLVAAANKSI 250


>gi|238786840|ref|ZP_04630641.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia frederiksenii ATCC 33641]
 gi|238725208|gb|EEQ16847.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia frederiksenii ATCC 33641]
          Length = 254

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 77/252 (30%), Gaps = 17/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+  +I+    S    A    +IK+ G L+ G+       A     G   G+D
Sbjct: 1   MKK---LSLGIMIVALLGSQQVLAKSWQEIKQSGELRIGVPGDYAPLAFHDKQGQLVGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  ++L  ++     KI ++P +       L + + DI       T  R     L+   
Sbjct: 58  IDMAKSLGESL---KLKINFVPSSWPTLSEDLAADKFDIAMGGVTETPGRAAQFALSSPV 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +           + K   ++  +   ++ V            +  A+  +   I  +   
Sbjct: 115 VKNGKIALANCQQAKKFPTLEAIDKETVKVIVNPGGTN--QSFVDANIKQAQIIRTKDNV 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQGDT 235
                 R    D    D   +      +  P         ILP   S       + + + 
Sbjct: 173 ANLQGVRDKSADIMFTD--LIEGDYYQSKEPGVFCVATPEILPGTGSYKVY--MMAKDNQ 228

Query: 236 EWYNIVSWTHYA 247
              + V+     
Sbjct: 229 PLLSEVNQWLSG 240


>gi|227500392|ref|ZP_03930454.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
 gi|227217455|gb|EEI82774.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
          Length = 491

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 14/229 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I     +  G +     +   +   +  G D D  +A+   +  +   ++   ++   
Sbjct: 27  EKIVDDNVIDLGTSADFPPYEYYEGK-NIVGIDPDIVKAIGKELGIE---VKLHDMDFNN 82

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146
              ++QS ++D  +     T  R+    + F        Q  I  K   I SV  L  G 
Sbjct: 83  IIASIQSGKLDGGASGFTVTEERKK--SVNFTEPFAKTSQIIIKRKADDIKSVDDLKKGK 140

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I  Q GT  +      F   N+      F +  +   + +  + DA   D  +  A + 
Sbjct: 141 KIGTQLGTIGDTLAKGDFGEENVN----SFNKFPDAIISLQTKKIDAIIIDKES--AKRF 194

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                 +  I+     +   A AI + +      ++     +    E+ 
Sbjct: 195 IAAN-KDLEIVNTPYMEEEYAIAISKNNPLLLKKMNEAIEKLKANGEID 242


>gi|42527595|ref|NP_972693.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Treponema denticola ATCC 35405]
 gi|41818423|gb|AAS12612.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Treponema denticola ATCC 35405]
          Length = 279

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 91/274 (33%), Gaps = 22/274 (8%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNAS----------ILGDIKKRGFLKCGINTGLVG 46
           M K+    F +S L L  +         +           L  I  +  L  GI      
Sbjct: 1   MKKNPNHIFKLSFLFLFTVLVMISCKPKAVRIQKKENDISLAKILVKKELIIGIRDDHPP 60

Query: 47  FAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           F+ +       +G+D++  + L + +   P    +  +   +R   L+  +ID +     
Sbjct: 61  FSVLNLFTTKMEGYDIEVAQELCNRMKIKP---IFKVIKWNQRESLLKDGEIDCIWSAFV 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
               +E  +  +            ++  K    S+  +    I + + +  + +L     
Sbjct: 118 --YSKESDVVYSLTSPYIKSAIILVVKDKSPYYSIQDIREKKIGITSSSFIQESLKKAES 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           +  +  + +VF+  +E   A      +    D+ ++  L  T      + +L + I+   
Sbjct: 176 SLGVFTNTVVFQNAQEAINALEKDEVECVVYDLLSINNLIQTRKGS--YRVLDEAIAYEE 233

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              A  + D    N V  T   M   + L  T K
Sbjct: 234 YVIAFRKEDIALKNAVESTLEEMAKTDFLEKTSK 267


>gi|223933394|ref|ZP_03625381.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
 gi|330832143|ref|YP_004400968.1| extracellular solute-binding protein family 3 [Streptococcus suis
           ST3]
 gi|223897961|gb|EEF64335.1| extracellular solute-binding protein family 3 [Streptococcus suis
           89/1591]
 gi|329306366|gb|AEB80782.1| extracellular solute-binding protein family 3 [Streptococcus suis
           ST3]
          Length = 291

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 77/262 (29%), Gaps = 20/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K    S L +  L   + S             +    +++ G LK      L   +  
Sbjct: 1   MLKKVLASALLVSTLTLAACSSSSSNTSSSSAEQTQWEKVQEAGVLKVATPGTLFPTSYY 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  G+++D    +   +     +I+Y  +   E F A+ S ++DI   N D T  R
Sbjct: 61  NDAKELVGYEIDMINEIGKRL---KLEIEYQEIGVAEAFTAVDSGKVDISVNNFDMTEAR 117

Query: 111 EISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +   G  +          + LS  +     G      +    +    
Sbjct: 118 KE--KYNFSIPYKYSVGGYIVREDGSSGIEAADLSDWTGKKAGGGAGTQYMK-IAEKQGA 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSP--L 226
           +         +         R D    D  + + A+K  N    +  +       +P   
Sbjct: 175 EPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVMAIKWANANFPDIKVKMGDAKYNPTEQ 234

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
              + + DT     +     AM
Sbjct: 235 GIVMSKADTSLKEKIDEALEAM 256


>gi|295426255|ref|ZP_06818916.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Lactobacillus amylolyticus DSM
           11664]
 gi|295064100|gb|EFG55047.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Lactobacillus amylolyticus DSM
           11664]
          Length = 536

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 89/299 (29%), Gaps = 31/299 (10%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA------ 52
           M   F    ++L +++  F   S N+      K  G LK G+      +   +       
Sbjct: 1   MKSRFNWIAAMLAVLLSLFMGLSFNSHRTEAAKNSGVLKIGMEANYPPYNWTQTTSANVA 60

Query: 53  ---NGDWK---GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +G      G+DV   + +   +      +            AL S +ID++      
Sbjct: 61  VPIDGSHSYANGYDVQIAKIIGKKLHKK---VIVEKTEWDGLLPALTSGKIDLIIAGMSP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R     + F           I++   K      +S   GA +  Q GT     +   
Sbjct: 118 TAERRK--AINFTVPYRKSTFVVIVNKASKYSNAKKLSDFKGAKLTAQQGTLHYTLIKQL 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDI- 220
             A               +  +  +   D Y  +     + +  N          +P   
Sbjct: 176 KGAKREP----AMRDFPSMRQSLASGTIDGYVAEDIEYQSYRNVNPNIIAVNLNKMPGFH 231

Query: 221 --ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                S ++  + + +T+    V+     + T +   +    I Q  K  ++   + +L
Sbjct: 232 VDHDDSVVSIGVKKSNTKLLKQVNAILKTIPTKKRNQLMATAIKQQPKAGSSAKKENWL 290


>gi|258507567|ref|YP_003170318.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus
           GG]
 gi|257147494|emb|CAR86467.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus GG]
 gi|259648916|dbj|BAI41078.1| ABC transporter substrate binding component [Lactobacillus
           rhamnosus GG]
          Length = 270

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 80/259 (30%), Gaps = 25/259 (9%)

Query: 1   MYKD---FFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K    F + ++ L+    T+        S N+ +  ++  +  L  G+      F+  
Sbjct: 1   MLKKKLWFLLPLVALVTFTLTACTGTSSDTSKNSDVTAELINKNELTIGLEGTYAPFSYR 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G  +GF+V+  +AL+  I       +++P         L S++ D++  +   T  R
Sbjct: 61  -KDGKLEGFEVELGKALAKKIGVKA---KFVPTQWDSLIAGLGSQKFDLVLNDISETPAR 116

Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +     I       I S++ + G +     GT           A   
Sbjct: 117 KKV--YNFTTPYMYSRYALITRSDNTTIKSLADIKGKTFVEGTGTPNAAL------AKKY 168

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227
                         +  +  R D      +A YA    N                P  +A
Sbjct: 169 GAKITPSGDFTVSLSLVKEKRADGTINASAAWYAFAKNNSTAGLKSQTLKDSVVKPDEVA 228

Query: 228 PAIIQGDTEWYNIVSWTHY 246
             + +   +    +S    
Sbjct: 229 GMVSKKSPKLQAALSKGIQ 247


>gi|218662126|ref|ZP_03518056.1| ABC transporter, substrate binding protein (amino acid) [Rhizobium
           etli IE4771]
          Length = 177

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 67/194 (34%), Gaps = 20/194 (10%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVD 62
              + ++    L  ++   NA           ++ GI N     F    A+G+W G+++D
Sbjct: 2   KTTICLIAGATLLASAAGANA----------EIRFGIMNEAYPPFFTKDASGNWVGWEID 51

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+ S +         + ++       LQSK+ D++  +   T  R+ ++   F    
Sbjct: 52  LMNAVCSEM---KETCSVVDMSWDGLIPGLQSKKFDVIWSSMSITDERKKTVA--FTNKY 106

Query: 123 YFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           Y      I  +     +    L+G +I +Q  T        Y+ +         +  ++E
Sbjct: 107 YNTPSKLIGAQDGKTGTAVEDLAGKTIGIQVSTIQADYYKKYYAS---VSSEKTYATLDE 163

Query: 182 IDAAYRAHRCDAYT 195
                   R D   
Sbjct: 164 AFQDLAVGRIDYVF 177


>gi|284163420|ref|YP_003401699.1| glutamine ABC transporter periplasmic protein [Haloterrigena
           turkmenica DSM 5511]
 gi|284013075|gb|ADB59026.1| extracellular solute-binding protein family 3 [Haloterrigena
           turkmenica DSM 5511]
          Length = 270

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 73/259 (28%), Gaps = 22/259 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDI--KKRG-----FLKCGINTGLVGFAEVKANGDWKG 58
              I  L    F     +A    D   +  G      +  G   G   F      GD  G
Sbjct: 16  LSGITGLAATGFAGCLEDAGNGDDEGNQSDGATGENEIIAGTAPGFPPFEMK-EGGDLVG 74

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+      D     +          +L S +ID+++        R+    LAF
Sbjct: 75  FDIDHLEAVVDE--TDYELTGWKEFEFGSLIQSLNSGEIDVIAAAMTINDERKE--KLAF 130

Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               Y   Q  ++         S+  L+G  +  Q+GTT E  + D     N       F
Sbjct: 131 TDPYYSANQSVLVQTGGDFEPSSLDDLAGRDLGAQSGTTGESIIEDEVDDANY----RSF 186

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E              +A   D               +  I     +       + Q D  
Sbjct: 187 ENYVYAVQELERGTLEAIVIDQPVAETFAAN----RDVEIAFTFETGEKYGLGVRQDDDG 242

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+  + E  
Sbjct: 243 LREALNEGIAAVEESGEYE 261


>gi|168180074|ref|ZP_02614738.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           botulinum NCTC 2916]
 gi|226948679|ref|YP_002803770.1| amino acid ABC transporter amino acid-binding protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|182669112|gb|EDT81088.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           botulinum NCTC 2916]
 gi|226843606|gb|ACO86272.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           botulinum A2 str. Kyoto]
          Length = 272

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 82/259 (31%), Gaps = 16/259 (6%)

Query: 1   MYKD----FFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K       VS L +I L        + ST     G+ K    +  G +     +   +
Sbjct: 1   MEKKKLSLILVSALAIITLLAGCGKEKATSTEGQNTGNSKSEKKIIVGTSPDYYPWCYTE 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           A G  +GF++D    +      D   I++        F  L + QID ++     T  R 
Sbjct: 61  A-GKLQGFEIDAWNEIGKKAGYD---IEFKQSKFSGLFGMLDAGQIDTVAHQISTTEERR 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F     + G  F+++K K I S+  L G  +    G   E TL    +   +  
Sbjct: 117 K--KYDFTETYAYSGYSFVVNKDKDIKSLEDLKGKKVGCTLGGNGEKTLKKLNEEKGLNI 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + +++   ++      R DA          +        +      +   +       
Sbjct: 175 KVLTYDQTP-MEKDVEIGRLDAAWIGTVKAKTVIEKEKMDLKLYDPKYVFEINQYPFKKD 233

Query: 232 QGDTEWYNIVSWTHYAMVT 250
             + +    ++     M+ 
Sbjct: 234 GKNKKMLEDINKAIKDMMA 252


>gi|319785577|ref|YP_004145053.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317171465|gb|ADV15003.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 282

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 85/263 (32%), Gaps = 27/263 (10%)

Query: 4   DFFVSILCLIILFFT----SFSTNASILGDIKKR---------GFLKCGINTGLVGFAEV 50
             F   + + +L F     + +    +L D K+R           L+    T    F  +
Sbjct: 6   RSFAFAMLIGLLSFADGARAAAPQVPVLWDAKERLPKPDLSTLPRLRFLTTTDFPPFNFL 65

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G   GF +D  RA+ + +     K Q   L   E   ALQ  + + +      T   
Sbjct: 66  DGAGKLSGFHIDLARAICAELGI-VEKCQIQALPWAELEGALQKGEGEAIIAGIAATP-- 122

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHN 168
           E     AF          F+M K K ++      L G  + V +G+  E  L DYF    
Sbjct: 123 ESRATYAFSRSYLQFPARFVMPKGKALTEPVFDKLHGKRVGVISGSAHERMLRDYF---- 178

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-- 226
                + F+R EE+ A  +A + DA  GD   L      +D                   
Sbjct: 179 NTVQVVPFDRPEELYADLKAGKVDAAFGDGMRLAFWLGGSDAAGCCRFAGGPYLAPEYLG 238

Query: 227 ---APAIIQGDTEWYNIVSWTHY 246
              A A    +      + +   
Sbjct: 239 TGMAIATKADNPALAAAIDYALQ 261


>gi|262282395|ref|ZP_06060163.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus sp. 2_1_36FAA]
 gi|262261686|gb|EEY80384.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus sp. 2_1_36FAA]
          Length = 485

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 14/237 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +     +L    L   + S          +K         ++    F     N  + G
Sbjct: 1   MKQKIIALLLTFSSLLTFASSVVHAEDKATPVKS--KYVISSDSSFAPFVFQDNNNQYTG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  +A++     +   I             +Q+   D +      T  R+ +    F
Sbjct: 59  IDMDLIKAIAKDQGFN---ITIKNPGFDVALNDVQTGHADGMIAGMTVTDARKKT--FDF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y       + K   ISS   L G ++ V+ GT+++  L D  K +  K     F  
Sbjct: 114 SDSYYSANSILAVAKSSTISSYEDLKGKTVGVKNGTSSQTFLTDNQKKYGYK--IKTFSD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              +  +  +    A   D   +   +    +  +     +      LA A+ +G  
Sbjct: 172 GASLYDSLNSGSVAAIMDDEPVI---RYAIKQGKKFKTPIEGTPSGKLAFAVKKGSN 225


>gi|313887535|ref|ZP_07821218.1| ABC transporter, substrate-binding protein, family 3 [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846413|gb|EFR33791.1| ABC transporter, substrate-binding protein, family 3 [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 284

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 83/279 (29%), Gaps = 35/279 (12%)

Query: 1   MYKDFF-VSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGIN 41
           M K  F ++++ +  L                        T    +  IKK+G +  G +
Sbjct: 1   MKKKIFNIALVAMTALLLFGCGKKEEAKEEAKEAVKFEITTTGPTVDAIKKKGKIVLGTS 60

Query: 42  TGLVGF---AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
                    +      ++ G D+   ++++ ++  +   ++   +  +    +L S  +D
Sbjct: 61  ADFPPMEWTSFQSGKEEFTGVDIAIAQSIADSLGVE---LEVKNMAFEGLLASLNSGDVD 117

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTT 156
           ++         R+    + F        Q  +     K    +   L G  +  Q GT  
Sbjct: 118 MVIAGMGADEERKK--QVDFSEEYSKGQQVLLVTEENKDKYKTFDDLKGKIVGTQLGT-- 173

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L   F       +   F+    I    +    DA             +       + 
Sbjct: 174 ---LQHKFATEKFGNNCKGFDLNNVIIEQLKNKSIDAAFLSE-LPAKQFASITDGLVIIK 229

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              I   S  A A+ +G+ +    V+     +  + ++ 
Sbjct: 230 DLGIPDDSGFAVAVKKGNDDLTGAVNEVVKGLKDSGQVD 268


>gi|159044765|ref|YP_001533559.1| extracellular solute-binding protein [Dinoroseobacter shibae DFL
           12]
 gi|157912525|gb|ABV93958.1| extracellular solute-binding protein [Dinoroseobacter shibae DFL
           12]
          Length = 242

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 61/210 (29%), Gaps = 24/210 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F + L  ++      +++ +          ++ G       +  +   G+  GF+
Sbjct: 1   MKTLIFGTALATLMAGAAFAASDGTT---------VRMGTEGAYPPYNFLNDAGEVDGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L +         +++  +       L S   D +      T  R+    + F  
Sbjct: 52  RELGDELCARA---ELTCEWVTNDWDSIIPNLVSGNYDTIIAGMSITDERDEV--IDFTQ 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                          G+S    L G  I  Q GT     +A      +     I F   +
Sbjct: 107 NYTQPDPS----AFMGLSEDVDLEGGVIAAQTGTIQASHIA------STGATLIEFASPD 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           E  AA R    DA   D + L      N  
Sbjct: 157 ETVAAVRNGEADAVLADKAFLEPFVTENAD 186


>gi|187477400|ref|YP_785424.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Bordetella avium 197N]
 gi|115421986|emb|CAJ48507.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Bordetella avium 197N]
          Length = 261

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 80/259 (30%), Gaps = 16/259 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M +   ++ L  I L  ++  + A  L  I+  G +                 +   +G 
Sbjct: 1   MKR--IINSLLAISLLCSAGLSQARSLEQIRAAGSMNVITTASAPPHGFKNPASNQLEGI 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  + ++  +      ++   +        L S + D++S     T  R   +  +  
Sbjct: 59  MVDVAQGVAQHL---KVSMKLSEVPFSGLIPTLTSGRADVMSAPLFITQERARVIDFSAP 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + +G       KK  +    + G  + V   +     + D             ++  
Sbjct: 116 VYEWGEGIVVSDKSKKSYARFGDMKGQRVGVLVDSVQFNMIKDM-----PGTKVTTYQDY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS---PLAPAIIQGDTE 236
             + A  RA R D    D  ++     T   P   V L           +  A+ +G+ +
Sbjct: 171 ATLLADVRAGRIDLGIVDPPSIIYQIQTRKIPG--VKLDTTYHPEKKWQVGLAVEKGNKD 228

Query: 237 WYNIVSWTHYAMVTAEELG 255
             + V+     M    E+ 
Sbjct: 229 LLDAVNAAIATMKQNGEMA 247


>gi|293192920|ref|ZP_06609764.1| serine/threonine-protein kinase PknD [Actinomyces odontolyticus
           F0309]
 gi|292819976|gb|EFF78975.1| serine/threonine-protein kinase PknD [Actinomyces odontolyticus
           F0309]
          Length = 311

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 80/229 (34%), Gaps = 12/229 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +   IKKRG L+ G +TG      + A+G    G+D+D  +AL+  +     +    
Sbjct: 58  AALVPDGIKKRGTLRNGASTGYAPAEYMDADGQTPIGYDIDINKALAKVMGLKAGET--K 115

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                    AL + + D+   +   T  RE  + +    +      G      K     S
Sbjct: 116 HSEFPTIIPALGT-KFDVGISSFTITSEREQQVNMV-SYLNVGSAWGVAAGNPKN-FDPS 172

Query: 142 QLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              GA+I VQ GT  E   A    +   A   K   +  E   +I       + DA   D
Sbjct: 173 NPCGATIAVQTGTAQEEYAATLSDECVAAGKEKITVMPHELQTDIATKLTGGQYDATLAD 232

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + +     ++    +   L D    +P   A+ + D +    V     
Sbjct: 233 STVI--GYTSSQSAGKIEQLGDTFESAPQGVAVAKDDAQLAEAVQKAMQ 279


>gi|261406923|ref|YP_003243164.1| family 3 extracellular solute-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261283386|gb|ACX65357.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           Y412MC10]
          Length = 278

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 77/260 (29%), Gaps = 16/260 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---------FLKCGINTGLVGFAEVK 51
           M K    +++  +        T        K             +  G  T       + 
Sbjct: 1   MKKSIVAAVVIALAGVIAGCGTGTKSGEAQKDSTANAAEGKVTKVVVGTGTAFPRICFID 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG   GFDV+  R +   +     + +          L+L++K+ID ++   +    R 
Sbjct: 61  ENGKLTGFDVELVREIDQRL--PEYEFELQTQEFSNLLLSLETKKIDFVAHQMEKNPERT 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                   P  Y+  +  +  +   I S++ L G  +   A +     L +Y K +N   
Sbjct: 119 EKYLFNKEPYAYWRNKIIVAKENDSIQSLNDLKGKKVLTGATSAAAQILENYNKDNNNAI 178

Query: 172 HPIVFERVE-EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
           + +       +  +     R DA  G    L  +       +    L +           
Sbjct: 179 NIVYQNGAANDTVSQITTGRVDATVGADFTLPLIDPQGKLKTTGDHLSEADIL----FVF 234

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            + D E   +      A+  
Sbjct: 235 RKDDPESQKLSDAVDNAIKE 254


>gi|158314294|ref|YP_001506802.1| extracellular solute-binding protein [Frankia sp. EAN1pec]
 gi|158109699|gb|ABW11896.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec]
          Length = 338

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 15/235 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP---SK 77
            +   L  I+KRGFL+ G++            +  ++GFDV+  + ++ A+F       K
Sbjct: 72  ASGGSLDKIRKRGFLRVGVSRDTQTRGAWSPVSHRFEGFDVELAQRIAEALFGPGTADEK 131

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           ++Y P++  ER  A+++ ++DIL     ++  R   +GL      +      + H++   
Sbjct: 132 VRYRPVSYAERLPAVENGEVDILVSTLTYSESRAERVGL--SAAYFTAHPRLLSHRESTH 189

Query: 137 ------ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                 I S  +L+G  +C   GTTT   L +  + H           + +   A++   
Sbjct: 190 SGAGPGIDSPEELAGKRVCAPRGTTTLTNLENTHQTHPTFEIVDHLNELSDCLVAFQQGE 249

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D    + ++L  +       +  +    +      + A  + DTE    V+   
Sbjct: 250 VDVVAANDASLVGMLEQ--DATAVLGTFSVGRDEYYSVAFERDDTELAGFVNGVL 302


>gi|171316454|ref|ZP_02905672.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171098394|gb|EDT43198.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 264

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 80/239 (33%), Gaps = 18/239 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + + +A           ++  ++           +G   GF +D   AL + +    ++ 
Sbjct: 18  AGAAHAGDW----TGKEIRLAVDPTYPPLEYKLPDGTLTGFGIDITNALCAEL---KARC 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137
            ++  +       L +++ D+++ +   T  R     +AF           I  K    +
Sbjct: 71  VWVESSFDGMIPGLLARKFDVIASSMTITPKR--MQQIAFTNRISNAPARLIARKGSPLL 128

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            + + L G  + V+ G+         ++A  ++     ++  +++ A     R DA    
Sbjct: 129 PTAASLKGKRVGVEQGSAQADYAIANWQAAGVQIE--SYQNQDQVYADLVTGRLDAAFQA 186

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
             A     L   +  + + +   I  +          + + D +  +  +    A + A
Sbjct: 187 SIAASDGFLKKPQGKDFMFVGAAIDDAKYFGQGDGLGLRKQDADLRDAFNRAL-ATILA 244


>gi|115361061|ref|YP_778198.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115286389|gb|ABI91864.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 264

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 79/239 (33%), Gaps = 18/239 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +  A           ++  ++           +G   GF +D   AL + +    ++ 
Sbjct: 18  AGAAQAGDW----TGKEIRLAVDPTYPPLEYKLPDGTLTGFGIDITNALCAEL---RARC 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137
            ++  +       L +++ D+++ +   T  R     +AF           I  K    +
Sbjct: 71  VWVESSFDGMIPGLLARKFDVIASSMTITPKR--MQQIAFTNRISNAPARLIARKGSPLL 128

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            + + L G  + V+ G+         ++   ++     ++  +++ A     R DA    
Sbjct: 129 PTAASLKGKRVGVEQGSAQADYAIANWQPAGVQIE--SYQNQDQVYADLVTGRLDAAFQA 186

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTA 251
             A     L   +  + + +   I  +          + + DT+  +  +    A + A
Sbjct: 187 SIAASDGFLKKPQGKDFMFVGAAIDDAKYFGQGDGLGLRKQDTDLRDAFNRAL-ATILA 244


>gi|238921538|ref|YP_002935053.1| putative ABC transporter, perplasmic amino acid binding protein
           [Edwardsiella ictaluri 93-146]
 gi|238871107|gb|ACR70818.1| probable ABC transporter, perplasmic amino acid binding protein
           [Edwardsiella ictaluri 93-146]
          Length = 256

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 62/214 (28%), Gaps = 9/214 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   L +++      S  A    DIK+ G L+ G+       A     G   GFD
Sbjct: 1   MKKIHFW--LTILLSLSGIHSATAKGWQDIKQSGELRVGVPGDYAPLAFHDKQGHLVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I+++  +       L + + DI       T  R     L+   
Sbjct: 59  IDMAHSLGQAL---HLNIRFVLSSWPTLSADLAADKFDIAMGGVTETPDRREKFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +          ++     S+  +    + V           DY   H      I      
Sbjct: 116 LKNGKIALTQCNRVNDFKSLEDIDHTEVRVVVNPGGTN--QDYVDIHIRHAKVIRERDNT 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                 R    D    D   L      N+ P   
Sbjct: 174 ASLQRIRERSADIMFTD--LLEGNYYQNNEPGIF 205


>gi|322832388|ref|YP_004212415.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321167589|gb|ADW73288.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 272

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 87/261 (33%), Gaps = 22/261 (8%)

Query: 1   MYKDFFV------SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K  F+      S+  + +         A +L     +G L  G     + F     +G
Sbjct: 1   MSKKAFLRRYAAVSLAAICLSAPLFSQAAAPVL---VSKGHLTYGTAATFMPFEFT-KDG 56

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D   ALS  +   P  +    +  K    ALQ K++DI++        R  S 
Sbjct: 57  KLTGFDIDLITALSKKLALTPEPMS---MEFKGLIPALQGKRLDIINSAMYINPTR--SE 111

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLA----DYFKAHN 168
            + F P      +  +        +     L G +I V  G   E            A  
Sbjct: 112 QVDFVPYLKIGSRVIVAKGNPEKITGRDLSLCGKNIAVTLGGIEESQARADNQKCLDAKK 171

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + F    +   A    R DA         AL L+    +   +  +  + + +  
Sbjct: 172 PALTVLTFPAATDSAVAVAQKRADAEFLSTPGAVAL-LSEKGDTFEAVGAEFEADTHIGF 230

Query: 229 AIIQGDTEWYNIVSWTHYAMV 249
           A+ +GDTE  +++      +V
Sbjct: 231 AVRKGDTEMKSLLEKGLQDVV 251


>gi|221214284|ref|ZP_03587256.1| cyclohexadienyl dehydratase [Burkholderia multivorans CGD1]
 gi|221165939|gb|EED98413.1| cyclohexadienyl dehydratase [Burkholderia multivorans CGD1]
          Length = 258

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 79/267 (29%), Gaps = 21/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M      +I    +L     +       S L D+  RG L+         ++  + +G +
Sbjct: 1   MK--TLATIAAAAMLCCAGAAQAEGAGASRLDDVLARGTLRVCTTGDYKPYSYYRTDGRF 58

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D+D   +L+ ++   P  ++     +     A    + DI       TL R+     
Sbjct: 59  EGIDIDMAESLAKSLGVKPDYVK----TSWSNLTADFVAKCDIAVGGVSTTLERQK--RA 112

Query: 117 AFRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F      DG+  I+         +          + V  G T E     YF        
Sbjct: 113 FFTQPYVVDGKTPIVRCGDVDKYQTVAQIDRPETRVIVNPGGTNERFAKQYF----THAT 168

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
             V+     I     A + D    D S    L+   +     V           A  + +
Sbjct: 169 LTVYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPR 227

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259
           GD  +   V    +  ++  E      
Sbjct: 228 GDVVFQQYVDQWLHLALSTGEYQAISD 254


>gi|295109169|emb|CBL23122.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Ruminococcus obeum A2-162]
          Length = 285

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 88/292 (30%), Gaps = 16/292 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--VKANGDWK-- 57
            K   + I  ++ +     +     +  +   G L    +     +    +  +G+    
Sbjct: 4   KKITAIMIGAVMAVSMAVPAMADDKVETVTD-GKLTVATSPDFAPYEFYSIDEDGNPTLS 62

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  + ++  +  +   +    ++       L  K +D+          R  +  + 
Sbjct: 63  GFDMDLAQYIADKMGLELEVVP---MDFDGVLSELSQKNVDLGMAGLSPDPAR--ADAME 117

Query: 118 FRPITYFDGQGF--IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F  + Y  GQ F  +  K     ++   +     + A T +     D    +      + 
Sbjct: 118 FSDLYYKGGQSFVTVKDKADQFKTLEDANNKDYSIGAQTGSIQL--DLANENTPDADIVP 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             +V ++       + D    + +   A     + P   ++          A  + +G+ 
Sbjct: 176 LPKVTDLITELLTGKMDGAFIETA--VAESYQKNYPDLEIVCDVPYDTEGSAIGVCKGNE 233

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
           E    V+      +    +     +  +++   T        G    ++  E
Sbjct: 234 ELLKAVNEAIADALDDGSMDKFIADATELAAGQTYEGTLDANGAVPEADDAE 285


>gi|17549794|ref|NP_523134.1| amino-acid-binding periplasmic (PBP) ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17432049|emb|CAD18726.1| probable amino-acid-binding periplasmic (pbp) abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 283

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 74/234 (31%), Gaps = 14/234 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+       + DIKKRG L  G       +  V  NG   GF  D    ++  +     +
Sbjct: 24  TTAFAEGGSIADIKKRGKLVVGTEAAYEPYEFV-ENGQVVGFGRDILVIMADKLGVKLEQ 82

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-G 136
           +    L  +     L S + D ++ +   T  R       F           ++      
Sbjct: 83  MN---LPFQGLLPGLLSHKFDFVATSVSITPERARRFA--FSQPVGTVRPVLMVRADDAS 137

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-----HPIVFERVEEIDAAYRAHRC 191
           I+    L+G  +  Q G++++     + K    +         +F+   +   A      
Sbjct: 138 ITRDLDLAGKVLGTQMGSSSQPAAEQFEKTLKEQRGKGYADTKLFQAYPDAALALSNKTV 197

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D     I +  A      +P    I+ ++     LA      D E    ++ T 
Sbjct: 198 D--VAFIPSNVAAIQMRKQPGAFKIVGEVGQPRLLAWVANPQDLEIRKFINDTL 249


>gi|251787823|ref|YP_003002544.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247536444|gb|ACT05065.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 259

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 74/235 (31%), Gaps = 17/235 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     +      +  S          L+ G        +  + +    GFD
Sbjct: 3   MKKIILPVLALSAAILVAGCDSQNS------NEKVLRIGATGQSYPSSFKQDS-KLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      ++++  +       L++ +++ ++     T  R+   G  F  
Sbjct: 56  VEVAETIAKDLNYK---VEWVTADFSGLMGQLEANKLNTIANVVAITPARQEKYG--FST 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   + HK    I+++  L G ++    G+     L   F   +       +E  
Sbjct: 111 PYSYYGSQIVTHKDNTGINTLDDLKGKTVAGVLGSNHVNNLKKAFA--DGSVTIRTYETR 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +   +   A R + Y      L A     + P    ++ + +    +     +  
Sbjct: 169 DGAMSDALAKRVEGYINSRPILLAEINKRNLP--FKMVGEPLVVEQVGFPFHKDQ 221


>gi|190894779|ref|YP_001985072.1| glutamine ABC transporter substrate binding protein [Rhizobium etli
           CIAT 652]
 gi|190700440|gb|ACE94522.1| glutamine ABC transporter, substrate binding protein [Rhizobium
           etli CIAT 652]
          Length = 275

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 9/246 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               ++  ++      +  A     +   G +  G       +    A+G + GFD++  
Sbjct: 14  LRAGLIACLLAAGMGSAAAADNPYKLIAPGVISVGTMGDAKPYTFATADGQFTGFDIELF 73

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             + S +     K+ +          ++ +++ D+       T  R+ +  + F      
Sbjct: 74  LNVVSRLGFPKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARKKT--VDFSDGYLA 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                +     GI   + L G  + V  GT  E+  A  F         + F       A
Sbjct: 132 GYLSVLTP-DAGIRDAAGLKGKRLGVVQGTLQEIYAAKNFG----GTDLVKFPDNNSAVA 186

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A      DA+  D     A +     P+  + +      +P    I +G+  +   ++  
Sbjct: 187 ALNNGTIDAHFLDYE--AAKQYGERFPALKIAVNIPSFDAPAGFVIRKGNDAFRTALNGA 244

Query: 245 HYAMVT 250
            +  + 
Sbjct: 245 LHDAMQ 250


>gi|71910519|ref|YP_282069.1| cystine-binding protein [Streptococcus pyogenes MGAS5005]
 gi|71853301|gb|AAZ51324.1| cystine-binding protein [Streptococcus pyogenes MGAS5005]
          Length = 287

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 85/269 (31%), Gaps = 15/269 (5%)

Query: 1   MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   +  + L  L         +  S    IK++G LK          +    N +  
Sbjct: 1   MKKSVTLLSIGLASLLLAACAPHQSQKSSWDTIKEKGVLKVATPGTYQPTSFYNDNNELV 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++VD  + +   +     K++++     + F ++ S ++DI   N D T  R+    ++
Sbjct: 61  GYEVDMVKEIGKRL---NIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNIS 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   G   +        +   LS       AG +    +     A       + ++
Sbjct: 118 TPYKYGVGGM-IVRADGSSNMAKKDLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYD 173

Query: 178 RV--EEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQ 232
            V  +         R D    D  A   +   + +  P+ +V + D+    +     + +
Sbjct: 174 NVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNK 233

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            D      +      M+    L    +  
Sbjct: 234 KDDSLKKKIDAVIKDMIKDGSLKKISETY 262


>gi|225867875|ref|YP_002743823.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701151|emb|CAW98036.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
          Length = 522

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 86/291 (29%), Gaps = 34/291 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     +  L+I      +  A          +L+ G+      F      ++     
Sbjct: 1   MKKLVLSCLATLLIFLGGIGTVQAD--------HYLRVGMEAAYSPFNWTQDDSSNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  D   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQIAKKIAKALNKDLLVVK---TSWTGLIPALTSGKIDLIAAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R+  +   F    Y      ++    K    +S+   SGA +  Q G      L    +
Sbjct: 110 ERKKEIA--FSNSYYTSEPVIVVASDGKYAKATSIKDFSGAKVTAQQGVWHVNLLPQLEE 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   D Y  +       +  N       +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDGYISERPEAMTAETANKAFKMITLTKGFTVSDS 223

Query: 226 LAPAIIQGD--TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            A   I      E    V+    A+   E L +  K I Q   ++   + +
Sbjct: 224 DAAIAIGMKKGDERLTTVNQVLDAISQKERLALMDKMIQQQPSESKAEEAK 274


>gi|223042390|ref|ZP_03612439.1| L-cystine-binding protein TcyA [Staphylococcus capitis SK14]
 gi|222444053|gb|EEE50149.1| L-cystine-binding protein TcyA [Staphylococcus capitis SK14]
          Length = 263

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 15/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M +  F  I  + +L     + ++S             L+ G       F          
Sbjct: 1   MKRLLFCIIALVFVLAACGNNDSSSDKDSKSSSKDDNTLRVGTEGTYAPFTFHNKQDKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+D  +A++ A   +  K+++   +    F  L + + D+++        RE      
Sbjct: 61  GYDIDVIKAVAKA---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGINKDREKKYK-- 115

Query: 118 FRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     +     ++   +K I S + + G  +  Q  T+    LA    A          
Sbjct: 116 FSNPYTYSSAVLVVRDNEKNIKSFNDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKV 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           +   +      + R DA   D  +    K       
Sbjct: 170 DGFNQSMDLLLSKRVDATFNDSLSYLDYKKQKPNAK 205


>gi|326774511|ref|ZP_08233776.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
 gi|326654844|gb|EGE39690.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 304

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 21/279 (7%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S+  S L      G ++ G      G +    +G++ GFD+   R +   +        
Sbjct: 28  CSSEPSSL---LAEGKIEIGSKGDQPGTSYSPHDGEFNGFDITVAREVLDRVGVKVKSSD 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLR-----EISLGLAFRPITYFDGQGFIMHKK 134
           +  + +K R  AL    + +++     T  R     E   GL F        QG ++  +
Sbjct: 85  FEGVLSKNRARALHDGDVQLVAATYSITEQRMKPTSEGGDGLDFVGPYASTRQGVLVRTE 144

Query: 135 K--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           +     + S L+G  ICV  GTT+   L     +       +     +E   A +  R D
Sbjct: 145 EAKRYKNHSDLNGRLICVWEGTTSAAELKKPAYSL---IRTVDMTDAQECVKALKEKRVD 201

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D   LY   + +D              +    A+ +G  E    +         + 
Sbjct: 202 ALSTDQLILYGF-MKDDPSITVAHALTFGPFNDYGIAMAKGHREDCKKLQQALMDYAQSN 260

Query: 253 ELGIT-QKNI------NQVSKDTTNPDVQRFLGIDKSSN 284
           +     Q N+      ++     T+ +++R   +D+ SN
Sbjct: 261 DWDRDFQINLPLVPKKDRDEARPTDDEIERSSCLDRPSN 299


>gi|213852458|ref|ZP_03381990.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 201

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 2/164 (1%)

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +Q+   D    +T   L R+      F    +  G   +  K   I     L G ++ V 
Sbjct: 1   MQNGTFDFECGSTTNNLERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVT 58

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +GTT+E+ L    +   M    I  +   +      + R  A+  D + L   +    +P
Sbjct: 59  SGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKP 118

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               I+    S+      + + D E+  ++  T     T+ E  
Sbjct: 119 DNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGEAE 162


>gi|182433982|ref|YP_001821701.1| putative glutamate transporter glutamate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178462498|dbj|BAG17018.1| putative glutamate transporter glutamate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 288

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 21/279 (7%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S+  S L      G ++ G      G +    +G++ GFD+   R +   +        
Sbjct: 12  CSSEPSSL---LAEGKIEIGSKGDQPGTSYSPHDGEFNGFDITVAREVLDRVGVKVKSSD 68

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLR-----EISLGLAFRPITYFDGQGFIMHKK 134
           +  + +K R  AL    + +++     T  R     E   GL F        QG ++  +
Sbjct: 69  FEGVLSKNRARALHDGDVQLVAATYSITEQRMKPTSEGGDGLDFVGPYASTRQGVLVRTE 128

Query: 135 K--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           +     + S L+G  ICV  GTT+   L     +       +     +E   A +  R D
Sbjct: 129 EAKRYKNHSDLNGRLICVWEGTTSAAELKKPAYSL---IRTVDMTDAQECVKALKEKRVD 185

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A + D   LY   + +D              +    A+ +G  E    +         + 
Sbjct: 186 ALSTDQLILYGF-MKDDPSITVAHALTFGPFNDYGIAMAKGHREDCKKLQQALMDYAQSN 244

Query: 253 ELGIT-QKNI------NQVSKDTTNPDVQRFLGIDKSSN 284
           +     Q N+      ++     T+ +++R   +D+ SN
Sbjct: 245 DWDRDFQINLPLVPKKDRDEARPTDDEIERSSCLDRPSN 283


>gi|148260139|ref|YP_001234266.1| extracellular solute-binding protein [Acidiphilium cryptum JF-5]
 gi|326402909|ref|YP_004282990.1| putative amino acid ABC transporter substrate-binding protein
           [Acidiphilium multivorum AIU301]
 gi|146401820|gb|ABQ30347.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidiphilium cryptum JF-5]
 gi|325049770|dbj|BAJ80108.1| putative amino acid ABC transporter substrate-binding protein
           [Acidiphilium multivorum AIU301]
          Length = 274

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 78/255 (30%), Gaps = 15/255 (5%)

Query: 3   KDFFVSILCLIIL----FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           K  F ++  L         T+ +    +   I+K G L+      L     + A     G
Sbjct: 5   KALFSALGVLAGAGLAGLTTAHAAAPGLPASIEKSGTLRICSAVNLPPMEFMNAETRPVG 64

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D   A++S +   P    ++ +       AL +   DI+         R     +  
Sbjct: 65  LDIDLGDAIASHLGVKPE---WINMPFAGLIPALLASHCDIIMSQLFIKPGRLKV--IDE 119

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPI 174
            P         +   K  + S+  LSG  +    GTT  + L     +   A       +
Sbjct: 120 IPYMISHEAVLVKRGKGAVPSLESLSGKKVATVTGTTATVLLKAANKELAGARKKPIDIV 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +F    +     +  +  AY        A    +  P +  +      K      I + +
Sbjct: 180 MFPENTQALQQLQFGQVAAYGVAYET--ARYYIHKAPGQFALGGPPYYKIATGIGIRKNE 237

Query: 235 TEWYNIVSWTHYAMV 249
              +  VS     M+
Sbjct: 238 AALHKAVSSALADMM 252


>gi|323442695|gb|EGB00322.1| extracellular amino acid binding ABC transporter [Staphylococcus
           aureus O46]
          Length = 245

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 12/183 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    +  G       F+    +G   G+D+D  +A++     +  K+++   +    F 
Sbjct: 16  KDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKE---EGLKLKFNETSWDSMFA 72

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASIC 149
            L + + D+++        RE      F     F     ++   +K I     + G  + 
Sbjct: 73  GLDAGRFDVIANQVGINPDREKKYK--FSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLA 130

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            Q  T+    LA    A          +   +      + R D    D  +    K    
Sbjct: 131 -QTFTSNYGKLAKDKGA-----DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKP 184

Query: 210 RPS 212
              
Sbjct: 185 NAK 187


>gi|188534299|ref|YP_001908096.1| Arginine-binding periplasmic protein 2 [Erwinia tasmaniensis
           Et1/99]
 gi|188029341|emb|CAO97218.1| Arginine-binding periplasmic protein 2 [Erwinia tasmaniensis
           Et1/99]
          Length = 243

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 75/217 (34%), Gaps = 12/217 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +    ++   +     F  + +     GFD+D   AL + +    ++  +          
Sbjct: 18  QAAEKIRFASSATYPPFESLNSENQIVGFDIDLANALCAQM---KAECSFTNNPFDSLVP 74

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           AL+ ++ D +    D T  R  S  ++F     +     I+ ++   + V QL G  + V
Sbjct: 75  ALKFRRYDAVISGMDITAER--SKQVSFTQPY-YANSAIIIAQQGKFTRVDQLKGKRVGV 131

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + GTT +  L +           + ++  +      + +R D   GD + + A   TN  
Sbjct: 132 ENGTTHQKYLQEKHPE----IVTVAYDSYQNAILDLKNNRLDGILGDSAVVGAWLKTNPN 187

Query: 211 --PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                  I       + +  A+ + +       +   
Sbjct: 188 LASVGEHITDSDFFGTGVGIAVRKDNAALLAEFNAAL 224


>gi|239622360|ref|ZP_04665391.1| glutamine-binding periplasmic protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|239514357|gb|EEQ54224.1| glutamine-binding periplasmic protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
          Length = 317

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGTDTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 184 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 241

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 242 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 285


>gi|241113461|ref|YP_002973296.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861669|gb|ACS59335.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 275

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 9/217 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  G       +    A+G + GFD++    + S +     K+ +          ++ 
Sbjct: 43  GTISVGTMGDSKPYTFATADGQFTGFDIELFLNVVSRLGFQKDKVTFTGQEFSALLPSVA 102

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           +++ D+       T  R+ +  + F           +     GI     L G  + V  G
Sbjct: 103 NERFDVAVAAIGTTEARKKT--IDFSDGYLAGYLSVLTP-DAGIKDADGLKGKRLGVVQG 159

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E+  A  F+        + F       AA      DA+  D     A +     P+ 
Sbjct: 160 TLQEVYAAKNFE----GTDLVKFPDNNSAVAALNNGTVDAHFLDYE--AAKQYGERYPAL 213

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            V +      +P    + +G+  +   ++   +  + 
Sbjct: 214 KVAVNIPSFDAPAGFVVRKGNDAFRTALNGALHDAMQ 250


>gi|311279446|ref|YP_003941677.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308748641|gb|ADO48393.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 255

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 68/212 (32%), Gaps = 7/212 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G       F         +GFD+D  +A++ A   +   I+ +    +  F  L +
Sbjct: 25  TYVVGAGGTYRPFEFENNQKQLEGFDIDIIKAIAKA---ENFNIKLVNTPWEGIFATLNA 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              DI+      T  R+    + F    +   Q  ++     ++S++ L    + V   +
Sbjct: 82  GDRDIIISGITITDKRKQM--VDFSAPYFPAEQSIVVPSTSKVASLASLKDEKVGVVNSS 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T ++ ++D    +        F+    +          A  GD+  +      +      
Sbjct: 140 TGDIVVSDVLGKN--STAIKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQHPEKQFK 197

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           ++      +     A+ +G+      ++    
Sbjct: 198 LVSDAKFERQYFGIAVAKGNDALLAKINDGLK 229


>gi|139438444|ref|ZP_01771960.1| Hypothetical protein COLAER_00950 [Collinsella aerofaciens ATCC
           25986]
 gi|133775983|gb|EBA39803.1| Hypothetical protein COLAER_00950 [Collinsella aerofaciens ATCC
           25986]
          Length = 331

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 83/219 (37%), Gaps = 13/219 (5%)

Query: 21  STNASILGD-IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  AS     +K  G  K G       F+ +   +G  +GFD    + LS+ I  + +K+
Sbjct: 79  AIAASTWATAVKDAGVFKIGGVQTSTLFSLLNEKDGQTRGFDAGIAQLLSNYILGE-NKV 137

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGI 137
           +   + +  R   LQ+ Q+D +      T  R+    ++F    Y+  Q  ++      I
Sbjct: 138 EITQVTSDTRESVLQNGQVDAVFATYTITDERKKL--VSFAGPYYYTQQAILVLADNDDI 195

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            SV  L   ++ VQ+G+     L ++    + +     F+  EE   A +  R DAY  D
Sbjct: 196 KSVDDLVDKNVAVQSGSNGPAILEEFAPKASQQ----EFKTDEEARQALQQGRVDAYVID 251

Query: 198 ISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDT 235
                        P ++ I      SK P    +     
Sbjct: 252 N--NMQQSALVREPGKYKIAGKPFGSKEPYGIGLPLDSD 288


>gi|154250742|ref|YP_001411566.1| prephenate dehydratase [Parvibaculum lavamentivorans DS-1]
 gi|154154692|gb|ABS61909.1| Prephenate dehydratase [Parvibaculum lavamentivorans DS-1]
          Length = 256

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 80/234 (34%), Gaps = 13/234 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  I+  G L+ G+      F+     G ++G DVD  RAL+ ++     +++ +P +
Sbjct: 25  DTLARIEAAGTLRVGLTGDYKPFSWEAPQGHFEGLDVDMARALADSLG---LRLEIVPTS 81

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY--FDGQGFIMHKKKGISSVSQ 142
                  L +++ DI       T  R  +   +   +T             +        
Sbjct: 82  WPGLMDDLAAEKFDIGMGGISVTEERRTTAFFSTPLLTDGKTPIARCEDAARFQTLDQID 141

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
             G ++ V  G T E     + +A+      I+ +    I       R D    D  A+ 
Sbjct: 142 REGVTLIVNPGGTNE----KFTRANIKTAAIILHKDNATIFEEIAEGRADLMITD--AIE 195

Query: 203 ALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +  + P+   +   +   +S  A  + Q +  W   V     AM  + E  
Sbjct: 196 TRIMAKEHPALCAIHPDEPFDRSEKAYLLPQDE-AWKARVDEWLAAMEASGEKA 248


>gi|107029120|ref|YP_626215.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116686988|ref|YP_840235.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|170734711|ref|YP_001773825.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|105898284|gb|ABF81242.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652703|gb|ABK13342.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169820749|gb|ACA95330.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 274

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 81/228 (35%), Gaps = 13/228 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +F  +A  L +I +   +  GIN  L       A     GFDV   R L+ A+      
Sbjct: 22  GAFPAHARSLQEILESKKIVFGINPNLPPLGLYDAKNTIDGFDVSVARKLADALGVK--- 78

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ + +R   L + +ID +          +    + F      +  G +  +    
Sbjct: 79  LEIVPVGSADRVPFLMADKIDAVMGGMTRNP--DRLKVIDFTDPVNTEVLGVLTTQATTF 136

Query: 138 SSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              +QL+  S+ +     TT    + +           ++ +   +   A    R DA  
Sbjct: 137 KDYTQLNDPSVRLVQVRGTTPVKLIQEQLPKA----QLLLLDNYPDAVRAIAQGRADALI 192

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             +  +  L  T + P++  ++   I        I +G+T     ++ 
Sbjct: 193 DVLDFM--LSYTKNYPTKWRVVDSPIEVDYDCIGIRKGNTALTERLNK 238


>gi|220929055|ref|YP_002505964.1| ABC transporter [Clostridium cellulolyticum H10]
 gi|219999383|gb|ACL75984.1| ABC transporter related [Clostridium cellulolyticum H10]
          Length = 500

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 93/256 (36%), Gaps = 23/256 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F                +  S L  +K+   +  G+          +      GFD
Sbjct: 244 MKKIF----------------SQKSSLNSVKRANTINIGVVDNSPPMCFSEDGNKLVGFD 287

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  ++++  +      +   PL  KER   + + +ID      + T  R+    + F  
Sbjct: 288 VDLAKSIAKRL---NVSLNLQPLKNKERIEYILTNKIDACIAKLNHTKARD--NLIDFSV 342

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
               D +  +M+K+  I  +S+L+G  I     T+T + + ++F+ HN  K + I +   
Sbjct: 343 SYLQDCKKILMYKE-NIGPISELAGKDIAYTIDTSTAMEIENFFEEHNWVKPNFIAYCSD 401

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+   A +      Y  D   +                P++   S     + + D+EW N
Sbjct: 402 EQAYNAMKHKLVAGYASDEIIINHFINGEAERGNFQYHPEVCCYSYFCVGVSENDSEWLN 461

Query: 240 IVSWTHYAMVTAEELG 255
            ++     +  + E  
Sbjct: 462 EINNILLEIYDSGEYE 477


>gi|319776577|ref|YP_004139065.1| arginine-binding periplasmic protein [Haemophilus influenzae F3047]
 gi|317451168|emb|CBY87401.1| arginine-binding periplasmic protein [Haemophilus influenzae F3047]
          Length = 239

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 80/257 (31%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F      G+  GFD
Sbjct: 1   MKKTLLTAILLGASVAASAQ--------------ELTFAMEPSYPPFETTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QATCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + L  +       +     +       + L  A+ + + +  
Sbjct: 154 NAILDLKSGRIDIILGDTAVLSDMISKEPEIQFVGEKVTNKKYFGNGLGIAMHKSNKDLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 AQLNKGLAAIKANGEYQ 230


>gi|317403729|gb|EFV84214.1| amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 263

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 75/216 (34%), Gaps = 11/216 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +    A  L DI KRG L+  + T     + +  +G   G  V+  + ++  +       
Sbjct: 21  AQPARADELSDIIKRGELRVAVQTSGPLMSFMDKSGKRTGLAVEVAKRMADDLGVKLVLQ 80

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y     K    AL S + D+++ +   T  R     + F    ++     ++ K+    
Sbjct: 81  DY---EWKGLIPALLSGKADMVAADMTPTPQRAA--QVLFSTPMFYADTVAVVPKESPYK 135

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID-AAYRAHRCDAYTGD 197
           S ++L    + V A      T A+  K    K     F         A  + R DA    
Sbjct: 136 SYAELDKDGVTVGAL--GASTYAEVGKKMLPKATLKEFSGGSAPVGQALSSGRLDAGIMS 193

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +S      +         +L  ++ + PLA A+   
Sbjct: 194 LSTANQFLVDFGN---LRVLDGVMVREPLAFAVAPN 226


>gi|53724019|ref|YP_104465.1| cyclohexadienyl dehydratase [Burkholderia mallei ATCC 23344]
 gi|238561570|ref|ZP_00441844.2| cyclohexadienyl dehydratase [Burkholderia mallei GB8 horse 4]
 gi|254201541|ref|ZP_04907905.1| cyclohexadienyl dehydratase [Burkholderia mallei FMH]
 gi|254206877|ref|ZP_04913228.1| cyclohexadienyl dehydratase [Burkholderia mallei JHU]
 gi|52427442|gb|AAU48035.1| cyclohexadienyl dehydratase [Burkholderia mallei ATCC 23344]
 gi|147747435|gb|EDK54511.1| cyclohexadienyl dehydratase [Burkholderia mallei FMH]
 gi|147752419|gb|EDK59485.1| cyclohexadienyl dehydratase [Burkholderia mallei JHU]
 gi|238524345|gb|EEP87778.1| cyclohexadienyl dehydratase [Burkholderia mallei GB8 horse 4]
          Length = 261

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 81/268 (30%), Gaps = 20/268 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M  +  +  L        + +       AS L D+  RG L+  +      +   + +G 
Sbjct: 1   MKMNQTLLALACCAGLAHAQTAPQPGTPASRLDDVLARGTLRVCMTGDYKPYTYRREDGA 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++G D+D   +L+ ++    + ++       + F+A    + DI       TL R+    
Sbjct: 61  FEGIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQK--R 114

Query: 116 LAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
           + F      DG+  I+           +        + V  G T E     +F       
Sbjct: 115 VFFTQPYVSDGKTPIVRCADAERYQTIAQIDQPQTRVIVNPGGTNERFAKQHFTRAK--- 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
              VF     I     A   D    D S    L+   +     V           A  + 
Sbjct: 172 -LTVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVP 229

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259
           +GD  +   V    +      EL     
Sbjct: 230 RGDVVFQQYVDQWLHLARETGELRAISD 257


>gi|326789759|ref|YP_004307580.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM
           5427]
 gi|326540523|gb|ADZ82382.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium
           lentocellum DSM 5427]
          Length = 294

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 81/272 (29%), Gaps = 33/272 (12%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55
           M +     +S + +     T   + A       +    + G+  G   F       +NG 
Sbjct: 20  MRRKLAALISAVAIGTTLLTGCGSGAKTGE---ESSTFRVGLECGYAPFNWTQMDDSNGG 76

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            K         G+DV+  + ++  +  +   +  +         AL S +ID +      
Sbjct: 77  VKIDGSAEYAGGYDVEIAKKIAEGLGKE---LVIVKTEWDGLVPALTSGKIDAIIAGMSP 133

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R+ +  + F    Y      ++ K    +  +S+   SGA +  Q  T     +   
Sbjct: 134 TAERKET--IDFSDNYYKSDLVMVVKKGGIYENATSIQDFSGAKVTAQLNTFHYTVIDQI 191

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI---LPDI 220
                        +    +  A  +   D Y  +     +    N   +           
Sbjct: 192 NGVEKQS----AMDNFPAMRVALESGMIDGYVSERPEGVSATNANPNFAMVEFEEGFETS 247

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              + +A  + + ++ W   V+     +   E
Sbjct: 248 DDDTAIAVGLRK-ESLWTANVNEILKGISEEE 278


>gi|14211227|gb|AAK57382.1|AF372619_1 GlnP [Streptococcus agalactiae COH1]
          Length = 727

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 87/290 (30%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+ +FF      ++          +    +T    F    ++  +KG D
Sbjct: 1   MKHKLKAFTLALLSIFFVFGGKVSAE--------TVNIVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIVNEVAKRAGWN---VNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +++  QL G  + V+ GT  +  L +        Y    F+  +
Sbjct: 108 TYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEEN--KSKYGYKVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            ++ +  +    A   D   +            + I  +  +    A A+ +G      I
Sbjct: 166 LMNNSLDSGSIYAAMDDQPVVQFAINQGK---AYAINMEREAVGSFAFAVKKGSGHDNLI 222

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                                   S  T N  + ++LG D +   G+A G
Sbjct: 223 -------------KEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKATG 259



 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 77/240 (32%), Gaps = 11/240 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K   ++    F      G + GFD++    ++        K+            A+QS Q
Sbjct: 273 KIVSDSSFAPFEYQNGKGKYTGFDMELITKIAKQ---QGFKLDISNPGFDAALNAVQSGQ 329

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G ++  + GT +
Sbjct: 330 ADGVIAGATITEARQKI--FDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTAS 387

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+D+   +N   H   F+    +  +  +   DA   D      L    ++  +   
Sbjct: 388 YTWLSDHADKYNY--HVKAFDEASTMYDSMNSGSIDALMDDE---AVLAYAINQGRKFET 442

Query: 217 LPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                    +  A+ +G + E   + +    ++  + E     K     +  ++N    +
Sbjct: 443 PIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAK 502


>gi|269955926|ref|YP_003325715.1| extracellular solute-binding protein family 3 protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304607|gb|ACZ30157.1| extracellular solute-binding protein family 3 [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 271

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 68/216 (31%), Gaps = 14/216 (6%)

Query: 32  KRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L          F+      GD  G+DV+  RA++  +     ++++        F 
Sbjct: 45  KAGTLTVATEGTYRPFSFHEDGAGDLVGYDVEIARAVAEKLG---LQVEFRETQWDAIFA 101

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            L + + D ++     T  RE      F           ++++    ++S   L+G +  
Sbjct: 102 GLDAGRFDTIANQVSITPDREA--KYLFSEPYTISHGVIVVNEGDTSVTSFEDLAGKTTA 159

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            Q+ T+    LA    A          E   +  A  +  R DA   D    Y   +  +
Sbjct: 160 -QSLTSNWYKLAQSAGA-----DVEPVEGWAQAVALLQQDRVDATINDE-LTYLDYVKEN 212

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             S   +       S  A    Q  T     V    
Sbjct: 213 GRSGLAVAATTDDVSLSAFVFTQQKTALQAAVDGAL 248


>gi|261338111|ref|ZP_05965995.1| serine/threonine-protein kinase PknD [Bifidobacterium gallicum DSM
           20093]
 gi|270276733|gb|EFA22587.1| serine/threonine-protein kinase PknD [Bifidobacterium gallicum DSM
           20093]
          Length = 311

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 64/229 (27%), Gaps = 13/229 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +     K G L  G++T       +  +G    G+DVD  +A+++ +  +       
Sbjct: 59  AAMVPEAYAKDGKLIVGMDTTYAPAEFLNEDGKTPVGYDVDLVKAMAAVMGLEAEP---T 115

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                    ++           + +T+  E    + F                      +
Sbjct: 116 TSKFDLIIPSVGD---KYDIGVSSFTVSPERMEAVDFVTYYKAGSLWVTRKGNPDKVDTA 172

Query: 142 QLSGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            L G ++ VQ GTT E  + +  K        +   +   +  ++       +  A+  D
Sbjct: 173 DLCGLTVAVQTGTTQEEEVTEMNKQCVADGKKEMEVLSSAQQTDVTTNVATGKAVAFFAD 232

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                              L +    +     + +GD      V     
Sbjct: 233 SP--VGEYAIAQTGDVLEPLGENEGVAVQGVVVKKGDEAMDKAVQAAIQ 279


>gi|23465745|ref|NP_696348.1| ABC transporter solute-binding protein [Bifidobacterium longum
           NCC2705]
 gi|23326430|gb|AAN24984.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium longum NCC2705]
          Length = 354

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 107 DSVAGDGTLTVGTDTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 163

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 164 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 220

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 221 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 278

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 279 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 322


>gi|227326338|ref|ZP_03830362.1| putative amino acid-binding periplasmic protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 260

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 97/257 (37%), Gaps = 25/257 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M++    + I+ +  +   +F+          K   L+ G++     F  +  NG+  GF
Sbjct: 1   MFRKLSLLKIVVIFAISPFAFA----------KSDILRIGVDLTYSPFQSMDKNGNPSGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +++   A+  +I    +K  Y+      +  AL +K+ID++      T  R+    + F 
Sbjct: 51  EIEVTDAICKSI---NAKCDYIVNTFDSQIPALLAKKIDVI-APLGVT--RKRKESIDFS 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +      +  K+  +   ++ L G +I VQ GT  E     Y+    +      +  
Sbjct: 105 DYVFHVPTKLVARKESNLLPQTELLRGKNIAVQQGTIQEAYANKYWLPAGVM--VKSYPA 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            E I    ++ R +       A+    L   +  +  +    ++ + L     A  I + 
Sbjct: 163 QEAIYEDLQSGRVEGALCPSVAVAFGFLNTPQGKDFELKGSEVTDADLFSLGSAYGIRKD 222

Query: 234 DTEWYNIVSWTHYAMVT 250
           DTE   +++     +V 
Sbjct: 223 DTETKQLINQGLKDIVQ 239


>gi|28868543|ref|NP_791162.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28851781|gb|AAO54857.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 263

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 83/258 (32%), Gaps = 17/258 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    S L L +        +AS L  + + G L          ++ ++ +G+ +G D+ 
Sbjct: 5   KYSVFSALLLGMAAMAQAQESASHLDKVLQTGQLAVCTTGDYKPYSLLREDGEHEGIDIT 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R+L+ ++    + +Q++P   K     + + + DI       +L R+     +     
Sbjct: 65  MARSLAKSLG---ATVQWVPTTWKTLLPDMVAGKCDIGMGGISVSLERQKKAFFSSTLDV 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                      +    +V Q++  S+ +           + F   ++    + F   + I
Sbjct: 122 DGKIPLVRCEDQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPNASLAFHDNKTI 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  + D    D S     +          P+ ++   +       A  + + D  W
Sbjct: 179 FQELLDKKADVMITDASEALYQQKRMPGLCAVNPTHYMQYGEK------AYLLPRDDVTW 232

Query: 238 YNIVSWTHYAMVTAEELG 255
            + V    +      E  
Sbjct: 233 KSYVDQWLHLSKATGEYQ 250


>gi|238784130|ref|ZP_04628144.1| ABC transporter, solute-binding component [Yersinia bercovieri ATCC
           43970]
 gi|238714976|gb|EEQ06974.1| ABC transporter, solute-binding component [Yersinia bercovieri ATCC
           43970]
          Length = 272

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 75/238 (31%), Gaps = 13/238 (5%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +      F++ + +A +L  IK    +          F  V  NG   G+DVD    + +
Sbjct: 1   MLCAASVFSATAHSADLLDRIKTDKTMTIATEARYAPFESV-ENGKIVGYDVDLMNHILN 59

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
                   ++ L L  +     L +K+ D +         R      AF           
Sbjct: 60  KSL-PGVAVKQLDLPFQGILPGLDAKKFDFVVTAVTVNKQR--MDHFAFTVPIAESTVAL 116

Query: 130 IMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-----IVFERVEEID 183
           +       IS++  LSG  +  QAG+     L ++ +       P       +   +E  
Sbjct: 117 LKRDNDSSISTLEDLSGKIVGSQAGSGQLQVLQEFNEKLKASGKPGLKEIKQYVSFDEAY 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNI 240
           A     R D     ++ L  L     RP     L P +   +       +GD     +
Sbjct: 177 ADLANKRLDGVAQSLANLGPLI--KTRPGIFTTLKPMLGPTTYFGWVGRKGDDSATLV 232


>gi|134045411|ref|YP_001096897.1| extracellular solute-binding protein [Methanococcus maripaludis C5]
 gi|132663036|gb|ABO34682.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 253

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 89/239 (37%), Gaps = 13/239 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           F    S+  +    +K  G L  GI   L         G+ KG+D+D  + +++ +  +P
Sbjct: 19  FSGCISSYGAECDTVK-PGVLTIGITPILPPLQYY-EEGELKGYDIDLMKEIANKMGLEP 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
               +   + K    AL + +ID +      T+  E    + F            + +  
Sbjct: 77  E---FKVYSYKGAEEALLNGEIDCIPST---TVSPERKERMEFSRAYLQTYMIVAVFENS 130

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
             + +  L+G  I V   T +E     Y  +  +    I +E ++++ +   +   DA  
Sbjct: 131 PYTELKDLNGKKIAVFKDTYSEDWSYSYLGS--IDAELISYESIDKLMSDIYSGNLDAVV 188

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D   ++    +     E  ++ + ++    A A+ + +    + ++   + +   E L
Sbjct: 189 TD--QIHMDYYSEQNNFESRMISEKMTIVYWAVALKKDNG-LQDRINDALFELEQDEAL 244


>gi|320530117|ref|ZP_08031187.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Selenomonas artemidis F0399]
 gi|320137550|gb|EFW29462.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtJ [Selenomonas artemidis F0399]
          Length = 260

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 86/322 (26%), Gaps = 65/322 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M    ++  L        + +         ++ G  + G +     F         + G+
Sbjct: 1   MILSKYIVPLLFGTAVIFAAAGCGGTNEASEQGGKWRVGTDASYAPFGFQDEKTHAYVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
                  + +       +++   LN      ALQ+  +DI   +      R     + F 
Sbjct: 61  ---DIDIIRAIAAAQGHEVEIKNLNFDGLIPALQTGDLDIAISDMTINEERAK--SVDFT 115

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y  G   ++       ++   L G  + V  G+T          A   +     +  
Sbjct: 116 DSYYKAGLSIVVRADETRYNAFEDLRGQKVGVTIGSTGAEV-----GATIPEVQLREYST 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +     +    DA   D            +     ++P  I++  L  A+ +G+TE  
Sbjct: 171 ISDAFLDLQNSGVDAVVNDTPVDEYYVQGRGKGIA-KVVPAQINQEDLGIAVKKGNTE-- 227

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
                                                 LG   +               R
Sbjct: 228 -------------------------------------LLGQLNAG-------------LR 237

Query: 299 IIRHMGNYGEMFDRNLGNQSEL 320
            I+  G Y E++ +  G +  +
Sbjct: 238 TIKENGTYAEIYRKWFGKEPPV 259


>gi|297627445|ref|YP_003689208.1| polar amino acid ABC transporter, binding protein component
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923210|emb|CBL57804.1| polar amino acid ABC transporter, binding protein component
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 303

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 73/223 (32%), Gaps = 12/223 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
              K +G L+ G N        +  +G    G D D  +A++S +     ++Q       
Sbjct: 55  EKFKTKGTLQVGTNATFAPIEFMAEDGKTIVGLDADLSKAVASKLG---LQVQMQQAEFG 111

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
              L + S + D+ +        R     +          +  + +       V+ L G 
Sbjct: 112 TIILGVTSGKFDMGASGFTINSER--IQQVNMVQYMKAGLRWAVQNGNPKKVDVNDLCGR 169

Query: 147 SICVQAGTTTELTLADYFK----AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ VQ  T +   LA+  K    A       +V +   +      + + DA   D     
Sbjct: 170 TVSVQRDTVSADQLAEKAKACTDAGKAAITQVVEDDQSKTTTDLNSGKSDAMLADSPI-- 227

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                         L D+   +P    + +GDT+  N+VS   
Sbjct: 228 VDYAIEQSNGSLEALGDMYDAAPYGIVLAKGDTDMANLVSKAL 270


>gi|290579736|ref|YP_003484128.1| putative amino acid binding protein [Streptococcus mutans NN2025]
 gi|254996635|dbj|BAH87236.1| putative amino acid binding protein [Streptococcus mutans NN2025]
          Length = 267

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 76/252 (30%), Gaps = 19/252 (7%)

Query: 1   MY-KDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M  K      ++    IL  T+  + +S       +  +          F+  +  G   
Sbjct: 1   MKLKHILRIGAVAFASILLLTACGSKSS-------KKTVTLATVGTTNPFSY-EKKGKLT 52

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D++  + +  A   D   ++Y        F  L S +  I + N  +T  R  +    
Sbjct: 53  GYDIEVAKEVFKA--SDKYDVKYQKTEWTSIFSGLDSDKYQIGANNISYTKER--ANKYL 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +   T  +    ++ K   I S + ++G S  V  G TT   L  + K H      + F 
Sbjct: 109 YSNPTASNPLVLVVPKDSDIKSYNDIAGHSTQVVQGNTTVPMLQKFNKNHENNQVKLNFT 168

Query: 178 RVEEI--DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
             +           + D +           +         ++     + P       Q  
Sbjct: 169 SEDLAHQIRNVSDGKYD-FKIFEKISAETIIKEQGLDNLKVIDLPSDQKPYVYFIFAQDQ 227

Query: 235 TEWYNIVSWTHY 246
            +    V+    
Sbjct: 228 KDLQKFVNKRLK 239


>gi|308235209|ref|ZP_07665946.1| extracellular solute-binding protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114811|ref|YP_003986032.1| ABC transporter solute-binding protein [Gardnerella vaginalis ATCC
           14019]
 gi|310946305|gb|ADP39009.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Gardnerella vaginalis ATCC 14019]
          Length = 308

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 15/224 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G+N          A+G    G+++DF +AL+  +       + +     
Sbjct: 62  ESVAKTGELTVGVNVSYAPAEFFAADGKTPVGYEIDFSKALAKLMGLKA---KIMHAQFD 118

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSG 145
               A+ S + ++          R     + F       G  F + K          L G
Sbjct: 119 SIIPAIGS-KYNVGISGFTVNAER--MKSVDFV-TYANAGLSFEVRKGNPTKVDPKNLCG 174

Query: 146 ASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
             + ++ GT  E  + +        ++     + F+   +   A  + R D    D    
Sbjct: 175 KKVTLETGTVGEPIMEEAKKQCKANNDKPLEIMSFKEQTDATTALLSGRADVMYADTP-- 232

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            A         +  IL       P+  A+ +GD +   ++    
Sbjct: 233 VAGYAAIKNNGKLEILESSNDAEPMGAAVKKGDAKMLKLIKAAI 276


>gi|251799198|ref|YP_003013929.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
 gi|247546824|gb|ACT03843.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           JDR-2]
          Length = 297

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 22/213 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------------------GFLKCGIN 41
           M K   V    L ++   +   + +   + + +                     +  G  
Sbjct: 9   MKKKALVVTAALSLILVAAGCGSNNKSDNTQAQNGNKAAANVSASGNAGGEVKKVVIGTG 68

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           TG      +  NG   GFDV+  + +   +     +     +      L+L++ +ID+++
Sbjct: 69  TGFPQVCFIDENGKLTGFDVELIKEIDKRL--PQYEFDIQTMEFSNLLLSLETNKIDLVA 126

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
              +    RE        P  ++  +  +      I S+  L+G  + V A +     L 
Sbjct: 127 HEMEKNPEREAKYLFNTEPYAHWRNKIVVPQDNNTIHSLDDLAGKKVLVGATSAQAQILE 186

Query: 162 DYFKAHNMKYHPIVFERVE-EIDAAYRAHRCDA 193
           +Y K H+ K + +       +  +     R DA
Sbjct: 187 NYNKDHDKKINIVYQNGAANDTVSQITTGRVDA 219


>gi|296877417|ref|ZP_06901454.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431578|gb|EFH17388.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 520

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 83/284 (29%), Gaps = 29/284 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K  F  +  L I    +   +A          +L+ G+      F       ANG  K
Sbjct: 1   MKKTIFALLTGLFICLGITQIAHAD--------DYLRIGMEAAYAPFNWTQEDDANGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +   P  ++    +      AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKVAEELGKKPLIVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    ++ + L          +   + L        
Sbjct: 110 ERKKEVA--FSKSYYTSEPVMLVRKDGNYANATSLDDFKDAKVT-SQQGVYLYSLISQLK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       ++  A  +   DAY  +       +  N +                A 
Sbjct: 167 GVKQETAMGDFAQMRQALESGVIDAYVSERPEALTAESANSKFKMIQFKKGFEVGEEDAT 226

Query: 229 AIIQGD--TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
             I         + V+    A +++E+      ++ +    +++
Sbjct: 227 IAIGMKKGDTRIDQVNAAL-AKISSEDQVKLMDDMIKKQPASSD 269


>gi|307727666|ref|YP_003910879.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307588191|gb|ADN61588.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 275

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 66/230 (28%), Gaps = 10/230 (4%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
            + L +   +  +     L  +KK G L  G       F  +  NG   GF+ +    + 
Sbjct: 11  FVMLALCAASVGAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKELFAEVG 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +      ++++ L        L++ + D++      T  R       +          
Sbjct: 70  KELGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPVADATDA 124

Query: 129 FIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +       +   S ++G ++    G+     L  Y            +    +  A   
Sbjct: 125 LLKRANDTALKQSSDIAGKTVGAGKGSAQLDQLKAYVATLPKPPEIREYVDNNQAYADLA 184

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
           A R  A    ++ +    +   RP    ++          A  + +    
Sbjct: 185 AGRIAAVANSMTNIA--YVAKQRPETFAVVQPPFGAKVYFAYCMRKDADS 232


>gi|217032730|ref|ZP_03438214.1| hypothetical protein HPB128_158g9 [Helicobacter pylori B128]
 gi|216945546|gb|EEC24201.1| hypothetical protein HPB128_158g9 [Helicobacter pylori B128]
          Length = 249

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 71/240 (29%), Gaps = 11/240 (4%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           ++I FF  F   +S+   +  +  +  G       F      G   G+DV+  R L+  +
Sbjct: 1   MVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKEL 60

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 I++   +       L+S + D+++     T  ++            + G   ++
Sbjct: 61  GVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSLPYSYSGTIMLV 116

Query: 132 HKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
            K    I  +  + G        +T          A       +  + + +        R
Sbjct: 117 RKDENRIKDIKDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSMAQALLLVAQKR 170

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D       A+     T+      +           +  I +   +   +++     ++ 
Sbjct: 171 ADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLIN 230


>gi|302531070|ref|ZP_07283412.1| predicted protein [Streptomyces sp. AA4]
 gi|302439965|gb|EFL11781.1| predicted protein [Streptomyces sp. AA4]
          Length = 267

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 75/245 (30%), Gaps = 16/245 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S L +++      +   S     +    L+ G  T       +  NG + G+D
Sbjct: 1   MRK--ILSTLAVVVAATAGLTACGSSDASGQ---TLRVGTLTDAPPSIYL-ENGQFTGYD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  R ++     +  +++++          +   Q DI S     T  R+ ++   F  
Sbjct: 55  NELLRDIAKR---EGFQVEFVGTEFSGLLAKVAGGQFDIGSSTISATAARKKTVA--FSN 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +  K   + + +  +G  + V  G+     + D F         + F    
Sbjct: 110 GYDTSYTTVVSKKGAALPAANSFAGKRVGVVQGS-----VQDEFAGKLAGAQVVRFPDYN 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              A  +    D +             N               +P A A+ + +TE    
Sbjct: 165 AGFAQLKTGGLDGWVVPKDIGQKYIDQNPAVPLEFGYTVADKDTPSAFAVAKSNTELLKK 224

Query: 241 VSWTH 245
           ++   
Sbjct: 225 INDGL 229


>gi|259907125|ref|YP_002647481.1| Arogenate dehydratase [Erwinia pyrifoliae Ep1/96]
 gi|224962747|emb|CAX54202.1| Arogenate dehydratase [Erwinia pyrifoliae Ep1/96]
          Length = 255

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 76/245 (31%), Gaps = 6/245 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            +++L     ++  S L  + +   L          +  ++ +G ++G D+   ++L+  
Sbjct: 6   AMVLLLLAGSASAQSHLDRVMQSKTLTVCTTGDYKPYTYLRPDGSYEGIDISLAQSLAKT 65

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   ++++P   K        KQ D+       TL R+ +   A    +        
Sbjct: 66  LGAE---VKWVPTTWKTLTADFIGKQCDVALGGVSVTLKRQQTAWFASPLDSDGKIPLVR 122

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              K    +V QL+  ++ +            +  A   + +  +F     I       +
Sbjct: 123 CVDKNKYRTVKQLNKPTVRLIEPAGGTN--EAFAHAFLPQANLTLFHDNVTIFQQLVDKK 180

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D    D S     +    +         +      A  + + D  W   V    +    
Sbjct: 181 ADVMVTDASEALYQQKRYPQLCAINPGKPLQYGE-KAWMLPRDDISWKMYVDQWLHLGKA 239

Query: 251 AEELG 255
           + E  
Sbjct: 240 SGEYQ 244


>gi|163843975|ref|YP_001628379.1| amino acid ABC transporter [Brucella suis ATCC 23445]
 gi|163674698|gb|ABY38809.1| Amino acid ABC transporter [Brucella suis ATCC 23445]
          Length = 281

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 70/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +          DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLVVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|295115401|emb|CBL36248.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [butyrate-producing
           bacterium SM4/1]
          Length = 300

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 65/224 (29%), Gaps = 13/224 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A+   +I   G LK G       F     N +  G+DV+  + +   +        +  
Sbjct: 57  EATRYENILSSGVLKIGTEGTYKPFTYHDENNELCGYDVEVGKMIGDKLGVKTE---FSE 113

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           +  +    +L +  +D++      T  RE      F     +     I      +    +
Sbjct: 114 ITWEGLLTSLDTGTVDLVLNQVGVTPEREE--KYDFSDPYLYSYIALI-----TLDDNEE 166

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++         T+  ++      A          +   +      A R D    +  A  
Sbjct: 167 ITDWESAEGKKTSLNVSSNYAGIAEQYGMDITASDTFSKDIELLLAGRTDCVINNTIAFN 226

Query: 203 ALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                    P + V + +      +A  I +G+ +    V+   
Sbjct: 227 DFLTQKPDTPIKIVAVQETPDT--VAIPIPKGNEDLLEAVNQAI 268


>gi|290891402|ref|ZP_06554463.1| hypothetical protein AWRIB429_1853 [Oenococcus oeni AWRIB429]
 gi|290479048|gb|EFD87711.1| hypothetical protein AWRIB429_1853 [Oenococcus oeni AWRIB429]
          Length = 378

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +     F   K NG + G DV+  RA++     +   +   P++       + S Q+D 
Sbjct: 21  TDVTYPPFEFQKKNGTYTGIDVEIIRAIAKK---EGFTMTLKPISFNSGAQMVLSGQMDG 77

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +      T  R+      F    Y  G  + + KK  I+ +SQL G ++ ++ GT +   
Sbjct: 78  IIAAMTITSERKKV--YDFSKPYYRTGIIWAVSKKSHITKLSQLKGKTVALKTGTASADY 135

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                K +  K     F     +          A               +     +    
Sbjct: 136 AKSLQKKYGFK--ITYFSDSNTMYNDVVVGNSAA--TFEDQSVMKYAIKNGLQLKIPSNK 191

Query: 220 IISKSPLAPAIIQGDTE 236
           I +      A+ +G  E
Sbjct: 192 IGNAGYYGFAVKKGKNE 208


>gi|157149654|ref|YP_001449773.1| putative amino-acid-binding protein [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157074448|gb|ABV09131.1| ABC transporter, substrate-binding protein SP0148 [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 285

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 11/236 (4%)

Query: 14  ILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
           +    + S + S     K   K+  ++         F+    +G   G++++  + +   
Sbjct: 24  VGTLAACSASNSKSESGKSDEKKVTIEIATVGTTRPFSYDDEDGKLTGYEIEVLKEVFK- 82

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
              D  +I +        F  L S +  I + N      +E +    +      +    +
Sbjct: 83  -GSDKYEINFNKTKWTSVFAGLDSDRFQIGANNIS--YSKERAGKYLYGNPYAKNPTVLV 139

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER--VEEIDAAYRA 188
           + K   I S+  + G S  V  GT+T   L DY K H  K   I +    +++I      
Sbjct: 140 VRKGTDIKSLDDIGGKSTEVVQGTSTAKQLEDYNKEHPKKETKINYTDGTIQQILVNLNE 199

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSW 243
            R D    +        + +       ++     + P       QG  E    V  
Sbjct: 200 GRADYKIFER-ISVDTIIKDQNLENLEVIELPSDQQPYVYPLFAQGQEELKTFVDK 254


>gi|311898325|dbj|BAJ30733.1| putative amino acid ABC transporter substrate-binding protein
           [Kitasatospora setae KM-6054]
          Length = 317

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 58/215 (26%), Gaps = 14/215 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            D+K  G L  G +T           G   G DVD   A++  +       ++      +
Sbjct: 68  ADLKSAGKLVIGSDTSYAPNEFKDEKGKIVGMDVDLGAAIAQKLG---LTAEFQSAGFTD 124

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               +QS +  +   +   T  R     +             +        ++  L G  
Sbjct: 125 IIPGIQSNKYQLGMSSFTVTKAR--QEQVDMVSYFSAGTSAAVKKGNPDKIALDDLCGKK 182

Query: 148 ICVQAGTTTELTLADY----FKAHNMKYHPI---VFERVEEIDAAYRAHRCDAYTGDISA 200
           + VQ GTT    + D              P     F    ++  A  + R      D   
Sbjct: 183 VAVQDGTTQADEVKDTRNPACAKAGKPAIPNDGDRFALQTDVAQALVSGRDQVMLADSP- 241

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                       +   + +    +P    + +G  
Sbjct: 242 -VVDYALKQTGGQLEKIGETYDSAPYGVILAKGSP 275


>gi|312865611|ref|ZP_07725836.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098879|gb|EFQ57098.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 514

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 87/284 (30%), Gaps = 31/284 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW-- 56
            K  F  IL L ILF    +  A          +L+ G+      F       +NG    
Sbjct: 5   KKISFSLILALAILFGGLSTAKADE--------YLRVGMEAAYAPFNWTQNDDSNGAVPI 56

Query: 57  -------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                   G+DV   + ++  +      ++           AL SK+ID++      T  
Sbjct: 57  EGSQQYANGYDVQIGKKIAKGMGKKLLVVK---TKWDGLLPALTSKKIDLIIAGMSPTEE 113

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F    Y      ++      +S ++LS             + L       + 
Sbjct: 114 RKK--EINFSNSYYTSEPVLVVKSDSKYASATKLSDFRGAKVTAQQG-VYLYGLIDQISG 170

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---- 225
                      ++  A  +   DAY  +         ++      V L +    +P    
Sbjct: 171 VKKQTAMGDFSQMRQALSSGVIDAYVSERPEAKTAMASSKDFK-MVSLKEGFKTNPSDTA 229

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           L+  + + DT     V+     +   E L +  K I Q   ++ 
Sbjct: 230 LSVGLRKDDTATQEKVNQILATIPEKERLKLMDKMITQQPSNSK 273


>gi|327182662|gb|AEA31109.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118]
          Length = 537

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 89/300 (29%), Gaps = 32/300 (10%)

Query: 1   MYKDF--FVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M   F    ++L +++  F  FS ++ S     K  G LK G+      +          
Sbjct: 1   MKSRFRWIAALLTVLLSIFIGFSFSSNSTQAAKKDSGTLKIGMEANYPPYNWTQPTKTNG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVHIDGSNSYANGYDVQIAKIIGKRLHKK---VIIEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      ++   GA +  Q GT     +  
Sbjct: 118 PTPERRK--AINFSEPYRKSTFVVITNKASKYSNAKKLTDFKGAKLTAQQGTLHYNLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVIL 217
              A               +  +  +   D Y  +     +    N        ++    
Sbjct: 176 LKGAKRQP----AMRDFSAMRQSLASGTIDGYIAEDIEFESYHNVNPNIVAINLNKMAGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + + +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKRDQLMSQAVKEQPKAGNQTKKENWL 291


>gi|260578023|ref|ZP_05845946.1| ABC amino acid transport system, secreted component
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603850|gb|EEW17104.1| ABC amino acid transport system, secreted component
           [Corynebacterium jeikeium ATCC 43734]
          Length = 318

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 12/212 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           D++ +G +  G N          ++G+  GF++D  RA  + +  D   ++   ++    
Sbjct: 59  DVQAKGKITVGTNPPYAPNEFKDSDGNIIGFEMDLIRAAGAMMGLD---VEVNQMDFNLI 115

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             A+ +  +D+ +     T   +      F                +   +     G  +
Sbjct: 116 LPAISAGSVDVGASAFTDTE--DRQTSYDFVDFYSAGISWATQPGNEESINPDNACGLKV 173

Query: 149 CVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            VQ GT ++         +           +V+E+ +    A    + DAY+ D   +  
Sbjct: 174 AVQKGTYSDTDEVQGRSDECEAQGKEPIEKLVYEKADAAATATILKKADAYSSDSPVIDF 233

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               +D     V + +    +P    + + + 
Sbjct: 234 AIARSDGK--LVRVGEPFDTAPFGMGVKKNNP 263


>gi|152985299|ref|YP_001349727.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Pseudomonas aeruginosa PA7]
 gi|150960457|gb|ABR82482.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Pseudomonas aeruginosa PA7]
          Length = 284

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 81/275 (29%), Gaps = 16/275 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              ++   L  L  +  S   S L  I+    ++ G       FA  + +G   G   + 
Sbjct: 10  RLALAGSLLAGLAASFASQAESTLERIQNSATVRIGY-ANEAPFAYTETSGKVTGESPEI 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              + SA+      I+ +          L++ + D+++  T  T  R     + F    Y
Sbjct: 69  AAKVFSAMGVKK--IEPVLTEWGALIPGLRAGRFDVIAAGTYITPPR--CRQVIFTDPHY 124

Query: 124 FDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 ++ +     + S + ++       A  +  + L         +   +       
Sbjct: 125 QIPDTLLVKRGNPKNLHSYADVAKNPDVRLAIMSGTVELGYARAEGVSEEQIVQVPDTTA 184

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYN 239
              A RA R DA  G    +  L        E       D       A A    D +  +
Sbjct: 185 QLQAVRAGRADASVGTALTMKGLASKGGDSVEAITDFKDDPAHIGYGALAFRPEDQDLRD 244

Query: 240 IVSWTHYAMVTA-------EELGITQKNINQVSKD 267
            V+      + +       E  G  + N+   S  
Sbjct: 245 AVNRQLKKWLGSDDHLRTVEPFGFDKSNLTDKSAA 279


>gi|257469841|ref|ZP_05633933.1| cyclohexadienyl dehydratase precursor [Fusobacterium ulcerans ATCC
           49185]
 gi|317064070|ref|ZP_07928555.1| cyclohexadienyl dehydratase [Fusobacterium ulcerans ATCC 49185]
 gi|313689746|gb|EFS26581.1| cyclohexadienyl dehydratase [Fusobacterium ulcerans ATCC 49185]
          Length = 252

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 79/224 (35%), Gaps = 13/224 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             + +I K+G ++ G       F  +  +  ++G+D++    ++  +      I+++P  
Sbjct: 21  DKVEEIMKKGVIRVGTTGDYKPFTYLNGD-KYEGYDIEIANLIAKELGVK---IEFVPTT 76

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQ 142
            K     L   + D+       T+ R++   +         G+ +++ K  K   +S+  
Sbjct: 77  WKTLISDLNEDKYDVAMGGITRTVKRQVEAQM--SNPYLVFGKCYLVRKGEKGKYNSIEA 134

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++  S+ V         +  +   H      I ++   ++  A      D    +     
Sbjct: 135 VNKPSVKVGVNIGGTNEI--FADEHLSNATIIRYKNNLDVPVAVEKGEVDIMVTENPEAV 192

Query: 203 ALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTH 245
             +     P     L D  ++KS +   + +      N +++  
Sbjct: 193 TYEKI--NPKLEGSLTDATLTKSQMGYMVAKDQQHLLNTINFIL 234


>gi|260583460|ref|ZP_05851208.1| amino acid ABC transporter amino acid-binding/permease
           [Granulicatella elegans ATCC 700633]
 gi|260158086|gb|EEW93154.1| amino acid ABC transporter amino acid-binding/permease
           [Granulicatella elegans ATCC 700633]
          Length = 270

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 85/287 (29%), Gaps = 36/287 (12%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW 56
           M K+    +L + I L   +  + +S          L  G+  G   F       ANG  
Sbjct: 1   MKKNLLKGLLTVAIGLGLAACGSKSS-------SNQLVVGMEAGYPPFNWTQQTDANGAV 53

Query: 57  K---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           K         G+DV+  + ++  +  +   ++            + S ++D +      T
Sbjct: 54  KIQGTNDYAGGYDVEIAKRVAKKLNKELVVVK---TEWDGLTPGVVSGKLDAIIAGMSPT 110

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
             R+    + F    Y      I+ K        +++  SGA +  Q  T     +    
Sbjct: 111 AERKE--AIDFSDNYYKSQLVMIVKKGSKYEQAKTLADFSGAKVTGQLNTFHYSVIDQIP 168

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                       +    +  A +A   DAY  ++    + +  N       +     +  
Sbjct: 169 GVAKQP----AMDNFPAMRVALQAGTIDAYVSELPEGVSAQAANSDFVMIKLSDGFQASD 224

Query: 225 P---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                A  + +      + ++     +  AE   I  + I       
Sbjct: 225 EDTDTAVGLKKNSP-LKDAINKALSEISDAERQQIMDEAIKNQPAAN 270


>gi|159904021|ref|YP_001551365.1| hypothetical protein P9211_14801 [Prochlorococcus marinus str. MIT
           9211]
 gi|159889197|gb|ABX09411.1| Hypothetical protein P9211_14801 [Prochlorococcus marinus str. MIT
           9211]
          Length = 109

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 69/109 (63%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +  L++   T+   + S LG IK+R  L CGI+  + GF+ ++++G+++G D+D C+A +
Sbjct: 1   MSMLLVGCATTNENDVSRLGLIKERNELICGISGKIPGFSFLESDGNYQGIDIDICKAFA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           +A   D   +QY PL A ERF A+++ +ID+LSRNT  TL R+   G  
Sbjct: 61  AAFTGDSDNVQYRPLTAAERFTAVRTGEIDLLSRNTTLTLSRDSLGGTD 109


>gi|148560124|ref|YP_001259772.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|148371381|gb|ABQ61360.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
          Length = 281

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 72/254 (28%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L     +   +     + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVTPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I++V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEINTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|149002609|ref|ZP_01827541.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
 gi|147759220|gb|EDK66213.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
          Length = 492

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 1   MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 60  YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 114

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 115 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223
           F     +  +      DA   D        +       P     + +    
Sbjct: 173 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 223


>gi|257059355|ref|YP_003137243.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
 gi|256589521|gb|ACV00408.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
          Length = 302

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 108/306 (35%), Gaps = 24/306 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   ++ L L+++   + ++ +   +  + + G L  G    L+ ++      +  G+
Sbjct: 1   MLKKLSLACLTLLLVLGGAKTSLSETVIEKVARTGVLTAGSRLNLIPYSYFNDKEELDGY 60

Query: 60  DVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +     +       +            +  ER   L S  IDI      +T  R+    
Sbjct: 61  SLAVLNLIREDLEKQLGKPIKLEIIEAQDISERIPKLMSGDIDISCDTV-FTWERDKF-- 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F       G   ++ K   + +   L G  + +   T     + D  K    K   I 
Sbjct: 118 VDFSLSYGVSGVRLLVPKNSTLGTPESLEGKRVAIIPHT----VIGDTIKLVQPKATLIP 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                E   A +A + DA  GD   L   +      +  ++  D  ++  +A  + +G++
Sbjct: 174 VNNFTEGIEALKAGKVDAIAGDSIILDGERQRLKSDNYQLVPEDPYARYGIACMVPEGNS 233

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD-VQRFLGIDKSSNIGEALGLTKD 294
            + N+V+++   ++              +  D    + + R++G +    I +   +   
Sbjct: 234 TFLNLVNYSIAKLMQG-----------YLIGDPKYQEIINRWIGPEGVVTIVKPEAIKDF 282

Query: 295 WTYRII 300
           + Y II
Sbjct: 283 FEYTII 288


>gi|116496256|ref|YP_807990.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|191639782|ref|YP_001988948.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus casei BL23]
 gi|227532749|ref|ZP_03962798.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|116106406|gb|ABJ71548.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|190714084|emb|CAQ68090.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus casei BL23]
 gi|227189583|gb|EEI69650.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 532

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 86/293 (29%), Gaps = 31/293 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---------- 49
           M K +   +  L         + A+  +      G  K G+  G   F            
Sbjct: 1   MKKHWVARLGVLGFALSLLLGSFAATPVNAASDSGTFKVGMEAGYAPFNWTQTTSANNAV 60

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
            ++ + ++  G+DV   R ++ A+      +  +  +      AL S +ID +      T
Sbjct: 61  KIQGSQEYANGYDVQIARKVAKALHKK---VVVVKTSWDGLPPALTSGKIDAIIAGMSPT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
              +    + F    Y      ++ K        S++   GA I  Q  T     +    
Sbjct: 118 P--DRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKITAQLSTYHYQAINQI- 174

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK- 223
               +   P        +  A  +   D Y  ++      +  N              K 
Sbjct: 175 --KGVVKEP-AMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKGQGFKT 231

Query: 224 ----SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               + LA  + + D      ++     + + E   +  + ++      +N +
Sbjct: 232 DASDTNLAIGLRKNDP-NKAKINELLATISSKERAQLMNEAVDNQPSTESNGN 283


>gi|28379594|ref|NP_786486.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum WCFS1]
 gi|300769534|ref|ZP_07079420.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|28272434|emb|CAD65358.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum WCFS1]
 gi|300492949|gb|EFK28131.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 271

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 77/260 (29%), Gaps = 26/260 (10%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILG------------DIKKRGFLKCGINTGLVGF 47
           M K      L ++ L  T + +   +                ++K   L  G+      +
Sbjct: 1   MKKWLKAVSLTILGLALTVALTACGNSSSSKSSTSSTSSQLKLQKSDTLTIGLEGTFQPY 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           +    +G   GF+VD  +A++  +       +++P         L   + D++  +   T
Sbjct: 61  SYR-KDGKLTGFEVDLGKAVAKKLGLKA---KFVPTKFDSLIAGLDVDKYDVVINDIAET 116

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R       F     +      + K   I+ ++ + G      A TTT     D   A 
Sbjct: 117 AQR--KQKYLFSTPYIYSKSELAVKKGSSINKITDIKGKK---VAQTTTSNNATD---AK 168

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPL 226
            +       +  ++        R         A YA    N + S + +     I    +
Sbjct: 169 RLGATVTPTDGFQQSIDLVNQGRVAGTINSREAFYAYLKQNPKASLKFISGGSEIKTQKI 228

Query: 227 APAIIQGDTEWYNIVSWTHY 246
              + +        +S    
Sbjct: 229 GAIVTKKHAPLQKQLSKAIQ 248


>gi|283476931|emb|CAY72809.1| cyclohexadienyl dehydratase, putative [Erwinia pyrifoliae DSM
           12163]
          Length = 256

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 76/245 (31%), Gaps = 6/245 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            +++L     ++  S L  + +   L          +  ++ +G ++G D+   ++L+  
Sbjct: 7   AMVLLLLAGSASAQSHLDRVMQSKTLTVCTTGDYKPYTYLRPDGSYEGIDISLAQSLAKT 66

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   ++++P   K        KQ D+       TL R+ +   A    +        
Sbjct: 67  LGAE---VKWVPTTWKTLTADFIGKQCDVALGGVSVTLKRQQTAWFASPLDSDGKIPLVR 123

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              K    +V QL+  ++ +            +  A   + +  +F     I       +
Sbjct: 124 CVDKNKYRTVKQLNKPTVRLIEPAGGTN--EAFAHAFLPQANLTLFHDNVTIFQQLVDKK 181

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D    D S     +    +         +      A  + + D  W   V    +    
Sbjct: 182 ADVMVTDASEALYQQKRYPQLCAINPGKPLQYGE-KAWMLPRDDISWKMYVDQWLHLGKA 240

Query: 251 AEELG 255
           + E  
Sbjct: 241 SGEYQ 245


>gi|328471191|gb|EGF42093.1| putative cyclohexadienyl dehydratase signal peptide protein [Vibrio
           parahaemolyticus 10329]
          Length = 245

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 70/230 (30%), Gaps = 12/230 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74
             T  +   S L +I  +G L+ G                 ++GFD+D    L+  +   
Sbjct: 1   MVTQVTHAQSRLQEILDKGVLRVGTTGDWNPMTMKDPATNSYRGFDIDVTTELAKDLGVK 60

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++Y+  + K     + + + D ++ +    + R    G +                 
Sbjct: 61  ---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQPYFYLAFVPVVQKKDL 116

Query: 135 KGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              S  +        +    GT  E  + ++F +       IV E          A R D
Sbjct: 117 AKFSDWADFNKPDVKVAATLGTVQEKMVKEFFPSAQH----IVIEAPARDFQELLARRAD 172

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                      L     +    V +      +P+A  + Q D  W N ++
Sbjct: 173 VSVTSNVEAATLVDKFKQ-LAIVPVKAPRRPTPIAMLLPQDDQVWINYIN 221


>gi|260430644|ref|ZP_05784616.1| extracellular solute-binding protein, family 3 [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418085|gb|EEX11343.1| extracellular solute-binding protein, family 3 [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 246

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 75/211 (35%), Gaps = 20/211 (9%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           IL  ++      +  A           L+ G++ G   F  VK +   +GF+VD   A+ 
Sbjct: 4   ILAFVLAIGLGTAATAET---------LRVGMSGGYFPFTFVKQD-VLQGFEVDVMNAVG 53

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                D   I +  ++      AL + +ID ++     T  RE      F      DG  
Sbjct: 54  EKAGLD---IAFETMSFSGLIGALDAGRIDTIANQITITPEREARFA--FSQPYVIDGAQ 108

Query: 129 FIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            ++ K    I  V  L G ++ V  G+  E  L +   A   +     +E     D A  
Sbjct: 109 VVVRKGNDAIKGVEDLKGHTVAVNLGSNFEQLLKELPYA--DEIEIKTYEANIAQDTAL- 165

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILP 218
             R DA+  D  +   L   +  P E    P
Sbjct: 166 -GRVDAFVMDRVSSAQLIAESPLPLELAGAP 195


>gi|271501217|ref|YP_003334242.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270344772|gb|ACZ77537.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 258

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 13/218 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    A G  +GFD+D   A+  A      K  ++  +      ALQ+
Sbjct: 24  ELRFGLEAEYPPFESKNAKGQLEGFDIDLGNAICKA---GNFKCSWVETSFDALIPALQA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           K+ D ++   + T  R+    + F  PI     Q           +   L G +I V  G
Sbjct: 81  KKFDAINSAMNITEKRKE--AIDFTQPIYRIPTQLVGKPNTGLAPTAEALKGKNIGVLQG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E+    +++          ++          A R D      +A  +  L       
Sbjct: 139 SIQEVYAKAHWEPKG--VTVTSYKDQNLAYDDLAAGRLDGTLVMAAAGQSGFLDKPEGKG 196

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHY 246
           +  +   +  +      +   + +GD      +     
Sbjct: 197 YAFIGGPVEDTSILGSGIGFGLRKGDETLKAELDKAIK 234


>gi|253687106|ref|YP_003016296.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251753684|gb|ACT11760.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 260

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 92/257 (35%), Gaps = 25/257 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M++    +  + +  +    F+          K   L+ G++     F  +  NG+  GF
Sbjct: 1   MFRKLYLLKFVAIFSISPFVFA----------KSDILRIGVDLTYPPFQSLDKNGNPSGF 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++   A+  +I    +K  Y+      +  AL +K+IDI+      T  R+    + F 
Sbjct: 51  DIEVTDAICQSI---NAKCDYIVNTFDSQIPALLAKKIDIIVP-LGVT--RKRKESIDFS 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +      +  K+  +   ++ L G +I VQ GT  E     Y+           +  
Sbjct: 105 DYVFHVPTKLVARKEANLLPQAELLRGKNIAVQQGTIQEAYANKYWLPAG--VIVKSYPD 162

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
            E I     + R +       A+    L   +     +    ++ + L     A  I + 
Sbjct: 163 QEAIYEDLYSGRVEGALCPSVAVEFGFLKTPQGKNFELKGPEVTDADLFSLGSAYGIRKE 222

Query: 234 DTEWYNIVSWTHYAMVT 250
           DT+   +++     +V 
Sbjct: 223 DTKTKQLINQGLKDIVQ 239


>gi|186470877|ref|YP_001862195.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184197186|gb|ACC75149.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 285

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 73/252 (28%), Gaps = 19/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +  L+       +T        +L  I+    +          F  V  NG 
Sbjct: 1   MNKPLRSLVFSLLGGLALVTATPGWSQTDDLLARIRTNKEITIATEARYAPFEYVD-NGK 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D D    +  +I     K++ L L  +     L +K+ DI+          +    
Sbjct: 60  IVGYDADLMAYVLKSI--PDVKVKQLDLPFQGLLPGLDAKRFDIVVTAVTVNK--DRVNH 115

Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK---- 170
            AF         G ++      I S   L+G  +  Q G+     L    K         
Sbjct: 116 FAFTVPVADATTGVLLRNGDTSIKSPEDLNGRIVGSQTGSAQLQALQALDKKLKDAGGPG 175

Query: 171 -YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAP 228
                 +   +E  A     R DA     S      L   RP    +LP  I  KS  A 
Sbjct: 176 IKQIKQYVAFDEAYADLAVGRLDAVA--QSVANLGPLMKSRPGVFALLPQTIGPKSYFAW 233

Query: 229 AIIQGDTEWYNI 240
              +       +
Sbjct: 234 VARKDSDSAALV 245


>gi|154766|gb|AAA50517.1| transport protein [Agrobacterium tumefaciens]
          Length = 276

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 83/274 (30%), Gaps = 45/274 (16%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +ILC  +L     +          +   +      G   +      G   GF+
Sbjct: 1   MK---LKTILCAALLLVAGQAAA--------QEKSITIATEGGYAPWNFSGPGGKLDGFE 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K Q +  N      +L  K+ D +      T  R+  +G  F  
Sbjct: 50  IDLANALCEKM---KAKCQIVAQNWDGIMPSLTGKKYDAIMAAMSVTPKRQEVIG--FSI 104

Query: 121 ITYFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTT 156
                  GF +     ++ +                          L+G ++ VQ  TT 
Sbjct: 105 PYAAGINGFAVMGDSKLAEMPGLGETYSLDSQADAAKKAIADISSFLNGTTVGVQGSTTA 164

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+ YFK          ++ VEE +    + R DA   + + L A     +     ++
Sbjct: 165 STFLSKYFK---GSVDIKEYKSVEEHNLDLTSGRLDAVLANATVLAAAIEKPEMKGAKLV 221

Query: 217 LPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAM 248
            P         +A  + + DT           A 
Sbjct: 222 GPLFSGGEFGVVAVGLRKEDTALKADFDAAIKAA 255


>gi|148264170|ref|YP_001230876.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter uraniireducens Rf4]
 gi|146397670|gb|ABQ26303.1| amino acid-binding domain sensor histidine kinase [Geobacter
           uraniireducens Rf4]
          Length = 604

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 77/204 (37%), Gaps = 13/204 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                I+ + +   + F   A  +   K    +  G +     +  +  +G   G++V+ 
Sbjct: 29  WVICLIIGVALSLASPFMAAADEVQQ-KTSRVVIVGGDRDYPPYEFIDKDGHPAGYNVEL 87

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +A++  +     K+++   +  E   ALQS ++D+L +   +++ R  +  + F     
Sbjct: 88  TKAIAEVMG---MKVEFRLGSWSEMRSALQSGKVDVL-QGMSYSVERSAT--VDFSLPHT 141

Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                    +    I+S+ +L G ++ V  G      + DY          ++ +   + 
Sbjct: 142 IVNHAIFARRDSPMINSLDELDGRAVVVHRG----GIMHDYLVRKGFTGKLVLTDTPADA 197

Query: 183 DAAYRAHRCD-AYTGDISALYALK 205
                + + D A    +  +Y ++
Sbjct: 198 LRQLSSGKHDYAVVAIVPGMYIIR 221


>gi|253580377|ref|ZP_04857643.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848470|gb|EES76434.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 271

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 93/287 (32%), Gaps = 21/287 (7%)

Query: 1   MY-KDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M  K     IL + IL    +   NA +    +++  +  G +     +  +  +G   G
Sbjct: 1   MKGKRVIAGILLVGILATALAGCKNADVTKKEREKPVITLG-SDSYPPYNYLNEDGIPTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+        +     ++  + +N +++   ++S +ID +                 +
Sbjct: 60  IDVELATEAFRRMGY---QVDVVQINWEKKKELVESGEIDCIMGCFSM---EGRLDDYRW 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFE 177
                   Q   +++   I  +S L G ++ VQ+ T  E    +       K  + I   
Sbjct: 114 AGPYIASRQVVAVNESSDIYKLSDLEGKNLAVQSTTKPEGIFLNRTDERIPKLGNLISLG 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E I         DA      ++       D      IL D +    +  A  + D   
Sbjct: 174 HRELIYTFLGKGYVDAVAAHEESIVQYMKDYDAS--FRILEDPLMVVGIGVAFAKEDDRG 231

Query: 238 Y-NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
               +  T       EE+     ++  +     +P  Q++L +D   
Sbjct: 232 ICEQMDQTL------EEMRQDGTSLKIIKNYLDDP--QKYLEVDDLG 270


>gi|239630711|ref|ZP_04673742.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301067862|ref|YP_003789885.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|239526994|gb|EEQ65995.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300440269|gb|ADK20035.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
 gi|327383896|gb|AEA55372.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei LC2W]
 gi|327387077|gb|AEA58551.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei BD-II]
          Length = 535

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 86/293 (29%), Gaps = 31/293 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---------- 49
           M K +   +  L         + A+  +      G  K G+  G   F            
Sbjct: 4   MKKHWVARLGVLGFALSLLLGSFAATPVNAASDSGTFKVGMEAGYAPFNWTQTTSANNAV 63

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
            ++ + ++  G+DV   R ++ A+      +  +  +      AL S +ID +      T
Sbjct: 64  KIQGSQEYANGYDVQIARKVAKALHKK---VVVVKTSWDGLPPALTSGKIDAIIAGMSPT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
              +    + F    Y      ++ K        S++   GA I  Q  T     +    
Sbjct: 121 P--DRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKITAQLSTYHYQAINQI- 177

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK- 223
               +   P        +  A  +   D Y  ++      +  N              K 
Sbjct: 178 --KGVVKEP-AMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKGQGFKT 234

Query: 224 ----SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               + LA  + + D      ++     + + E   +  + ++      +N +
Sbjct: 235 DASDTNLAIGLRKNDP-NKAKINELLATISSKERAQLMNEAVDNQPSTESNGN 286


>gi|225174437|ref|ZP_03728436.1| extracellular solute-binding protein family 3 [Dethiobacter
           alkaliphilus AHT 1]
 gi|225170222|gb|EEG79017.1| extracellular solute-binding protein family 3 [Dethiobacter
           alkaliphilus AHT 1]
          Length = 252

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 17/251 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   + + ++ L +                     L  G++T  V F   + +G+  GFD
Sbjct: 1   MKTKWKLFLIVLTVSMLVLAGCGGGDSEQ------LTIGVDTMFVPFEFEQ-DGEMVGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    LS  +  +        +  +    AL S  ID+       T  R     + F  
Sbjct: 54  IDILEELSERMGFEYE---IQTMEFRGLIPALTSNSIDMAFAGMTITEER--QETIDFSI 108

Query: 121 ITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y  G   ++      I+ +  L+G  +  + GT++   L      +  +   I F+ +
Sbjct: 109 PYYDAGLLIMVLEDNDDINGIEDLAGRRVATRTGTSSYDYLMSLDFIN--ENDVIAFDNM 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +           DA   D  A      T     +  ++ +++        + +G +E   
Sbjct: 167 DAAYFELLTEGVDATLWDSPAQQYYVQTEGEG-QVKLVGELLEGQQYGIGLPKG-SELKE 224

Query: 240 IVSWTHYAMVT 250
            V     AM+ 
Sbjct: 225 DVDAALEAMME 235


>gi|76788581|ref|YP_330104.1| polar amino acid ABC transporter permease/substrate-binding protein
           [Streptococcus agalactiae A909]
 gi|76563638|gb|ABA46222.1| polar amino acid uptake (PAAT) family ABC transporter,
           substrate-binding/permease protein [Streptococcus
           agalactiae A909]
          Length = 727

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 78/240 (32%), Gaps = 11/240 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K   ++    F      G + GFD++  + ++        K+            A+QS Q
Sbjct: 273 KIVSDSSFAPFEYQNGKGKYTGFDMELIKKIAKQ---QGFKLDISNPGFDAALNAVQSGQ 329

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G ++  + GT +
Sbjct: 330 ADGVIAGATITEARQKI--FDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTAS 387

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+D+   +N   H   F+    +  +  +   DA   D      L    ++  +   
Sbjct: 388 YTWLSDHADKYNY--HVKAFDEASTMYDSMNSGSIDALMDDE---AVLAYAINQGRKFET 442

Query: 217 LPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                    +  A+ +G + E   + +    ++  + E     K     +  ++N    +
Sbjct: 443 PIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKTAK 502



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 87/290 (30%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+ +FF      ++          +    +T    F    ++  +KG D
Sbjct: 1   MKHKLKAFTLALLSIFFVFGGKVSAE--------TVNIVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIVNEVAKRAGWN---VNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +++  QL G  + V+ GT  +  L +        Y    F+  +
Sbjct: 108 TYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEEN--KSKYGYKVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            ++ +  +    A   D   +            + I  +  +    A A+ +G      I
Sbjct: 166 LMNNSLDSGSIYAAMDDQPVVQFAINQGK---AYAINMEGEAVGSFAFAVKKGSGHDNLI 222

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                                   S  T N  + ++LG D +   G+A G
Sbjct: 223 -------------KEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKATG 259


>gi|86150165|ref|ZP_01068392.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85839281|gb|EAQ56543.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
          Length = 256

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 26/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  +    L  ++                L  G+  G   F      G   G  
Sbjct: 1   MKKIILI-FISFFALNLSA--------------KDLVVGMELGYPPFEMSDKIGKASGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDKRKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +GD    
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALK 216

Query: 239 NIVSW 243
           + +  
Sbjct: 217 DKLDN 221


>gi|290770265|gb|ADD62020.1| putative protein [uncultured organism]
          Length = 272

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 11/231 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            +S +    L   S   N            L  G +   V ++ + ++G++ G DV+  R
Sbjct: 16  ILSAIVSAGLMACSNIHNNGSKSSSNDLKPLIIG-SDNYVPYSYLDSDGNFTGIDVEIAR 74

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
                +   P    +  +    + + L+   +D L      T   +      +     + 
Sbjct: 75  EACRRMGYTP---VFKQIVWDNKDIYLKEGAVDCLWGCFTMTGREDK---YNWAGPYMYS 128

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
            Q  +++K  GI S++ L G  + VQ  +  E  L++                +EE+ A+
Sbjct: 129 RQIVVVNKNSGIESLADLKGKRVAVQVTSKPEYILSNTNMPQ--VGVLYSMSTMEELYAS 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            R    DA  G  +A+              +L + +S S L  A    +  
Sbjct: 187 MRKGYVDAIAGHENAMNVFVQ--SNEEHFGVLREELSVSELGIAFSFDNDS 235


>gi|294787943|ref|ZP_06753187.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Simonsiella muelleri ATCC 29453]
 gi|294484236|gb|EFG31919.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Simonsiella muelleri ATCC 29453]
          Length = 286

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 74/263 (28%), Gaps = 20/263 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF---STNASILGDIKK-------RGFLKCGINTGLVGFAEV 50
           M     ++   ++ L   S    ST AS                      +        +
Sbjct: 1   MLMRTILASGVMMALMACSGGEKSTPASTNESATSATTALDSSKTYIVATDASYAPMEFM 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             N    GF  D   A + +      K+ ++    +  F  +     DI   +      R
Sbjct: 61  -ENNQVVGFSHDVLDAAAKS---QNVKLDFVNTPFEGLFANVGKGDSDIALASITINDER 116

Query: 111 EISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           +    L F    +   Q  +        I + + L   +  VQ+ T+ +L L +      
Sbjct: 117 K--QQLDFSDPYFEATQMIVTTERNHDKIKNFADLKTRAASVQSATSGDLILQNL--QGK 172

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
              +   FE +        +   DA  GD S +      + +     I+     K     
Sbjct: 173 DSANIKRFETMPLAFKELESGGVDAVVGDSSVVGYYVKQHPKDKLFTIVDPSFIKEQYGF 232

Query: 229 AIIQGDTEWYNIVSWTHYAMVTA 251
           A  +G  +          + + A
Sbjct: 233 AFRKGRNDGLREAINKGLSTIKA 255


>gi|253690356|ref|YP_003019546.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756934|gb|ACT15010.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 263

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 82/235 (34%), Gaps = 13/235 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+L L   F  +   +     +  +   LK G           + N    GFD
Sbjct: 1   MMKKVTLSVLALTTAFLVAGCDSGKSSAE--QEKVLKVGSTGQSYPSGFKQDN-KLVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +      ++++  +       L++K++D ++     T  R       F  
Sbjct: 58  VEVTEAIAKDLNYK---VEWVTADFSGLMGQLEAKKLDTVANVVAITPAR--QEKYNFAQ 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F G   + HK    I++++ L G ++    G+     L   F   +   +   +E  
Sbjct: 113 PYSFYGSQIVTHKDNADINTLADLKGKTVAGVLGSNHVNNLKKAFA--DGSVNIRTYETR 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +       + R + Y      L A     + P    ++ + +    ++    + +
Sbjct: 171 DGAMNDALSKRVEGYVNSRPILLAEINKRNLP--FKLVGEPLVIEEVSFPFHKDE 223


>gi|195978778|ref|YP_002124022.1| probable amino-acid ABC transporter-binding lipoprotein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195975483|gb|ACG63009.1| probable amino-acid ABC transporter-binding lipoprotein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 281

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 79/247 (31%), Gaps = 16/247 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              +  L +    +  T        K     +          F+  +  G   G+D++  
Sbjct: 9   LAGLAVLSVGMLAACGTKEKSASSTKDTPKEVIFATVGTTAPFSF-EKEGQLTGYDIE-- 65

Query: 65  RALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             ++ A+F D    K+Q+        F  L S +  +   N  +T  R       F    
Sbjct: 66  --VAKAVFKDAEKYKLQFKKTEWSSIFTGLDSGKYQMGGNNISYTKERSA--KYLFSYPI 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ERVE 180
                  ++ K   I S   + G S  V  GTTT   L  + + H      + F  E + 
Sbjct: 122 GATPSVLVVPKDSDIKSYDDIKGHSTQVVQGTTTAAQLKAFNEEHADNPVELKFTNETIT 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWY 238
           ++       + D    D   + A+   +++  +H+   ++ +     +     Q   E  
Sbjct: 182 QMLTNLNEGKADFKIFDAPTVNAII--DNQGLDHLKTIELATSEQPFIYFIFSQDQEELQ 239

Query: 239 NIVSWTH 245
             V+   
Sbjct: 240 AFVNKRL 246


>gi|163744543|ref|ZP_02151903.1| extracellular solute-binding protein, family 3 [Oceanibulbus
           indolifex HEL-45]
 gi|161381361|gb|EDQ05770.1| extracellular solute-binding protein, family 3 [Oceanibulbus
           indolifex HEL-45]
          Length = 253

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 17/254 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           K+  V  L + +         A           LK G     V F  +        G  V
Sbjct: 8   KNLRVIALAVGLSAAAMEPAMAQD---------LKVGSTPTGVPFTFLNVETNQIDGIMV 58

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  +A++     D   ++           +L   +I I++     T  R   +  +    
Sbjct: 59  DIMKAIAEEEGFD---VEINATQWSALIPSLTGGKISIIAAAMYATPERAEVVSFSETVY 115

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +Y +G       +   SSV  + G ++ VQ GT+      D  +A        V++ + +
Sbjct: 116 SYGEGLFVKSDNETAYSSVKDMEGLTVGVQVGTSY----KDALEASGRFDDIKVYDSIAD 171

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           I       R DA  GD   +             V   + ++   +A A+ + DTE    +
Sbjct: 172 IMRDVALGRIDAGFGDYPIVAYQLAKGTSEVRLVQEYEALAPGNVAIAVRKDDTELLGKI 231

Query: 242 SWTHYAMVTAEELG 255
           +    ++    EL 
Sbjct: 232 NNGLKSIRENGELD 245


>gi|325523103|gb|EGD01506.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           [Burkholderia sp. TJI49]
          Length = 256

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 31  KKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           K  G L  G    G   FA    +G + G + D  + +   I    +   ++        
Sbjct: 2   KAAGVLHAGNGLMGTRPFAWQNEDGTYGGLESDLLKEVGKRIGVPKT--DFVVTEWSTLI 59

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L++++ D++  +   T  R  +  + F    +      I+     I S + L G  + 
Sbjct: 60  PGLKARRWDVIFSSMSATQERIQNANVRFSRPYFLLYDQIIVKTDSPIQSPADLKGRKVG 119

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
              GT   L               + F    E  AA +  + DA   D   L   +    
Sbjct: 120 TTLGTNDSLNAHRLADE-GKIGEVMDFNTFGEPFAALQNGQVDAVLLDQGTLLGQREKMK 178

Query: 210 R------PSEHVILPDIISKSPL--------APAIIQGDTEWYNIVSWTHYAMVT 250
                  P  +   P+  +            A A+    T+  N V+    +M  
Sbjct: 179 NLRVVGQPIYYRPKPEWAAAEAKANYRFGSSAVAVRAECTDLLNAVNNALLSMDQ 233


>gi|327189449|gb|EGE56611.1| glutamine ABC transporter substrate binding protein [Rhizobium etli
           CNPAF512]
          Length = 275

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 79/246 (32%), Gaps = 9/246 (3%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               ++  ++      +  A     + + G +  G       +    A+G + GFD++  
Sbjct: 14  LRAGLMACLLAAGMGSAAAADNPYKLIEPGVISVGTMGDAKPYTFATADGQFTGFDIELF 73

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
             + S +     K+ +          ++ +++ D+       T  R+ +  + F      
Sbjct: 74  LNVVSRLGFPKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARKKT--VDFSDGYLA 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                +     GI   + L G  + V  GT  E+  A  F         + F       A
Sbjct: 132 GYLSVLTP-DAGIKDAAGLKGKRLGVVQGTLQEIYAAKNFG----GTDLVKFPDNNSAVA 186

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A      DA+  D     A +     P+  + +      +P    I +G+  +   ++  
Sbjct: 187 ALNNGTIDAHFLDYE--AAKQYGERFPALKIAVNIPSFDAPAGFVIRKGNDAFRTALNGA 244

Query: 245 HYAMVT 250
            +  + 
Sbjct: 245 LHDAMQ 250


>gi|89001383|gb|ABD59216.1| InkU [Nonomuraea longicatena]
          Length = 272

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 75/224 (33%), Gaps = 12/224 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
               +     ++  +   L G      +G  +GFDVD  R L   +        ++P+ A
Sbjct: 27  TGDGVLSADTVRVAVRVDLPGIGARGPSGAVEGFDVDVARYLVGKLGKKA---VFVPVTA 83

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLS 144
            +R   L S + D++      T   +    + F        Q  ++ + +  I +V  L+
Sbjct: 84  ADREKVLTSGRADMVLATFSITQ--DRKERVLFAGPYQLSYQDILVRRGETRIKNVRDLA 141

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G SIC   G+     + +      +    + F+          +   DA T +   L  L
Sbjct: 142 GRSICEVKGSNAGQRVVE---ERKVAARLVPFDSYGPCMERLLSGEVDAVTTNDVILAGL 198

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +       ++    ++      +  GD E    V+     M
Sbjct: 199 AAESSG---LRLVNAQFNEQRTGVGMRLGDVEGCEAVNRAITGM 239


>gi|225871182|ref|YP_002747129.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
 gi|225700586|emb|CAW95102.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
          Length = 281

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 81/247 (32%), Gaps = 16/247 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              +  L +    +  T        K     +          F+  +  G   G+D++  
Sbjct: 9   LAGLAVLSVGMLAACGTKEKSASSTKDTPKEVIFATVGTTAPFSF-EKEGQLTGYDIE-- 65

Query: 65  RALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             ++ A+F D    K+Q+        F  L S +  +   N  +T  R  S+   F    
Sbjct: 66  --VAKAVFKDAEKYKLQFKKTEWSSIFTGLDSGKYQMGGNNISYTKER--SVKYLFSYPI 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ERVE 180
                  ++ K   I S   + G S  V  GTTT   L  + + H      + F  E + 
Sbjct: 122 GATPSVLVVPKDSDIKSYDDIKGHSTQVVQGTTTAAQLKAFNEEHADNPVELKFTNETIT 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWY 238
           ++       + D    D   + A+   +++  +H+   ++ +     +     Q   E  
Sbjct: 182 QMLTNLNEGKADFKIFDAPTVNAII--DNQGLDHLKTIELATSEQPFIYFIFSQDQEELQ 239

Query: 239 NIVSWTH 245
             V+   
Sbjct: 240 AFVNKRL 246


>gi|227508254|ref|ZP_03938303.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227192483|gb|EEI72550.1| L-cystine ABC superfamily ATP binding cassette transporter, binding
           protein YckK [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 271

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 79/260 (30%), Gaps = 26/260 (10%)

Query: 1   MY-----KDFFVSI-LCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAE 49
           M      K F +++ +    +  T+  ++ S        ++K+   L  G+      ++ 
Sbjct: 1   MKIGKGIKRFALALGVVATGVLLTACGSSNSSSKGGYTSELKQSKQLTIGLEGTYAPYSY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            + +G   GF+VD  + ++  +        ++P         L S + D++  N   T  
Sbjct: 61  RQ-DGKLTGFEVDLGKTVAKKMNLKA---NFVPTKWDSLIAGLGSSKYDVVLNNIAETPE 116

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R+      F     +     I       I  +S + G  +    GT  E       +A  
Sbjct: 117 RKK--SYIFSTPYIYSRYALITKAGDKSIQKLSDVKGKKLAEGTGTNNE------AQAKK 168

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--L 226
           +    +         A  R  R         A +A   +N                P  +
Sbjct: 169 LGAKTVPSGDFTTTLALIRQGRVQGTINAREAWFAYAKSNSTKGLTYHKVSDSQAEPVNI 228

Query: 227 APAIIQGDTEWYNIVSWTHY 246
           +    Q DT+     +    
Sbjct: 229 SAMFNQKDTKLKAKFNKVLQ 248


>gi|212716467|ref|ZP_03324595.1| hypothetical protein BIFCAT_01391 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660720|gb|EEB21295.1| hypothetical protein BIFCAT_01391 [Bifidobacterium catenulatum DSM
           16992]
          Length = 315

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 72/290 (24%), Gaps = 50/290 (17%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI----------------------------------- 26
            K    +  C + +                                              
Sbjct: 4   KKSLKTAAACALSVAMLFAGAACGTSDGSDDAASSDSGSKSSELTGYDVSSVQKDDDIAK 63

Query: 27  --LGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL 83
                + K G L  G++T       +  +G    GFDVD  +AL+     +         
Sbjct: 64  LLPDYVTKDGKLTIGMDTSYAPAEFLAEDGKTPVGFDVDIAKALAQVFGLEADP---ETA 120

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           N      ++ S + DI   +   T  R     + F           +          S L
Sbjct: 121 NFDSIIPSVGS-KYDIGISSFTVTKER--LEAVDFVSHFDAGSAWAVKKGNPNKIDTSDL 177

Query: 144 SGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            G  + VQ  T  E       K        K   I  +   ++       + D +  D  
Sbjct: 178 CGKKVTVQTATMQETEANKMAKQCEADGKDKLEVISSKLQTDVTTNVVTGKADVFYADSP 237

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              A         +   L  +   +P    I +GD++    V      ++
Sbjct: 238 --VAGYAIAQTDGQLETLGKVEGVAPEGIVIKKGDSQMDEAVQKAVQKLI 285


>gi|193782594|ref|NP_435604.2| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
 gi|193073050|gb|AAK65016.2| ABC transporter, periplasmic solute-binding protein [Sinorhizobium
           meliloti 1021]
          Length = 313

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 85/275 (30%), Gaps = 23/275 (8%)

Query: 3   KDFFVSILCLIILFFTS-FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +      L L  +  +   S  A  L  I+    +K G +     F+         G+ V
Sbjct: 13  RRIVRFGLTLGAVTVSMWASAEAQTLDRIRSSSTVKLGYDATARPFSFKAEGESATGYAV 72

Query: 62  DFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
             C  +       +      ++++ L  +    A++    D+    +  TL R   +  +
Sbjct: 73  SLCMEVVEELKRELGIADLAVEWIELTREAADHAIRQGSADLFCGASPVTLTRRKEVSFS 132

Query: 118 FRPITYFDGQGFIMHKKKGISSV------------------SQLSGASICVQAGTTTELT 159
                   G          +  V                  + L+  +    AGTT+E  
Sbjct: 133 IAIFPSGTGAVLNASAPLALREVLTQGRPSDRPIWRGSPARTVLNQKTFSPIAGTTSEDW 192

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           LA+  K   +       E  ++  A       D   GD+  L       +   + ++L  
Sbjct: 193 LAERIKTFQLSATIAAVENYDQGIANILNGESDVLFGDLPLLLDAAARGENSGDLIVLKR 252

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             +  PLA  + + D ++  +V         +E+ 
Sbjct: 253 HFTYEPLALVLARNDEDFRIVVDRALSRTYRSEDF 287


>gi|303233198|ref|ZP_07319871.1| bacterial extracellular solute-binding protein, family 3 [Atopobium
           vaginae PB189-T1-4]
 gi|302480783|gb|EFL43870.1| bacterial extracellular solute-binding protein, family 3 [Atopobium
           vaginae PB189-T1-4]
          Length = 332

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 12/222 (5%)

Query: 19  SFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
           +     S     + + G L+ G     + F+ +   +G  +GFD    + L+  I  D  
Sbjct: 77  AARVAKSTWATKVAQAGKLRIGGVKTSILFSILDEKDGKVRGFDAGLSQMLTRYIVGDTQ 136

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K +   + +  R   LQ+ Q+D++      T  R+    ++F    Y   QG ++     
Sbjct: 137 KQELTLVTSNTRESVLQNDQVDVVFATYSITDARKKV--ISFAGPYYTTQQGILVTADNT 194

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ ++ L+   +  Q+G+T    L               F   EE   A    R DAY 
Sbjct: 195 SINGLADLANKKVAAQSGSTGPSILEKLAPEA----TVQEFATDEEARGALSQGRVDAYV 250

Query: 196 GDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTE 236
            D +           P ++ ++ +           +      
Sbjct: 251 IDETMQRG--SIVRNPGKYKLVGESFGPVDSYGIGVPHDSDA 290


>gi|83035005|gb|ABB97481.1| GlnA [Halobacillus dabanensis]
          Length = 265

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 13/199 (6%)

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G+ +GFD+D  +A++     +   I+   +        +QS + DI       T  R+
Sbjct: 55  ETGEMEGFDIDLIKAIADEAGFN---IEIESMKFDGVVAGMQSGRYDIGIAGMTITEERK 111

Query: 112 ISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
            +  + F    Y  G    +      I S   L+G  +  ++GTT+E  + +    ++  
Sbjct: 112 ET--IDFSDPYYDAGLMLAVSADNDEIQSEDDLAGKKVGTRSGTTSETYITE----NHPD 165

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              + F  + E      + R DA   D           +         DI+       A 
Sbjct: 166 AELVTFPGIVEAYMDLESGRLDAVMYD--VPNVQYYVANDAEGLKTAGDILQGEQYGIAF 223

Query: 231 IQGDTEWYNIVSWTHYAMV 249
            + D+E    V+     ++
Sbjct: 224 PK-DSELVEDVNEALQTLI 241


>gi|116627112|ref|YP_819731.1| ABC-type amino acid transport system, permease and periplasmic
           component [Streptococcus thermophilus LMD-9]
 gi|116100389|gb|ABJ65535.1| ABC-type amino acid transport system, permease and periplasmic
           component [Streptococcus thermophilus LMD-9]
          Length = 516

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 78/291 (26%), Gaps = 36/291 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG------ 54
           M K        L+++F    S  A          +L+ G+      F   + +       
Sbjct: 1   MKKIIVACFAALLLVFGGVSSAQADE--------YLRVGMEAAYAPFNWTQDDNSNGAIP 52

Query: 55  -----DWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ A    P  ++           AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQIAKKIAEAQGKKPLVVK---TAWTGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC--VQAGTTTELTLADYFKA 166
            R     + F    Y      ++      +    +                  L D    
Sbjct: 110 ER--RQEIDFSDSYYRSEPVIVVSSDGNYAKAKSVKDFKNAKITAQQGVYLYNLIDQIPN 167

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----II 221
            N +           +  A  +   D Y  +               + + L D       
Sbjct: 168 VNKQT---AMGDFGAMRQALASGIIDGYVSERPE-ARTAEKASSKYKMISLKDGGFQVSD 223

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               LA  + +GD +    V+     +   + + +    I+    D T+  
Sbjct: 224 DDVSLAVGLRKGDNQQMEQVNKVLAGISQEKRVKLMDHIIDIQPADKTDEA 274


>gi|77411077|ref|ZP_00787431.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae CJB111]
 gi|77162900|gb|EAO73857.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae CJB111]
          Length = 727

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 87/290 (30%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+ +FF      ++          +    +T    F    ++  +KG D
Sbjct: 1   MKHKLKAFTLALLSIFFVFGGKVSAE--------TVNIVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIVNEVAKRAGWN---VNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +++  QL G  + V+ GT  +  L +        Y    F+  +
Sbjct: 108 TYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEEN--KSKYGYKVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            ++ +  +    A   D   +            + I  +  +    A A+ +G      I
Sbjct: 166 LMNNSLDSGSIYAAMDDQPVVQFAINQGK---AYAINMEGEAVGSFAFAVKKGSGHDNLI 222

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                                   S  T N  + ++LG D +   G+A G
Sbjct: 223 -------------KEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKATG 259



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 78/240 (32%), Gaps = 11/240 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K   ++    F      G + GFD++  + ++        K+            A+QS Q
Sbjct: 273 KIVSDSSFAPFEYQNGKGKYTGFDMELIKKIAKQ---QGFKLDISNPGFDAALNAVQSGQ 329

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G ++  + GT +
Sbjct: 330 ADGVIAGATITEARQKI--FDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTAS 387

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+D+   +N   H   F+    +  +  +   DA   D      L    ++  +   
Sbjct: 388 YTWLSDHADKYNY--HVKAFDEASTMYDSMNSGSIDALMDDE---AVLAYAINQGRKFET 442

Query: 217 LPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                    +  A+ +G + E   + +    ++  + E     K     +  ++N    +
Sbjct: 443 PIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAK 502


>gi|22537609|ref|NP_688460.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|25011575|ref|NP_735970.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae NEM316]
 gi|76797646|ref|ZP_00779916.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77405223|ref|ZP_00782321.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae H36B]
 gi|77414125|ref|ZP_00790292.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 515]
 gi|22534494|gb|AAN00333.1|AE014259_4 glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|24413114|emb|CAD47192.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae NEM316]
 gi|76587007|gb|EAO63495.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77159836|gb|EAO70980.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 515]
 gi|77176225|gb|EAO78996.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae H36B]
          Length = 727

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 87/290 (30%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+ +FF      ++          +    +T    F    ++  +KG D
Sbjct: 1   MKHKLKAFTLALLSIFFVFGGKVSAE--------TVNIVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIVNEVAKRAGWN---VNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +++  QL G  + V+ GT  +  L +        Y    F+  +
Sbjct: 108 TYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEEN--KSKYGYKVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            ++ +  +    A   D   +            + I  +  +    A A+ +G      I
Sbjct: 166 LMNNSLDSGSIYAAMDDQPVVQFAINQGK---AYAINMEGEAVGSFAFAVKKGSGHDNLI 222

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                                   S  T N  + ++LG D +   G+A G
Sbjct: 223 -------------KEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKATG 259



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 78/240 (32%), Gaps = 11/240 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K   ++    F      G + GFD++  + ++        K+            A+QS Q
Sbjct: 273 KIVSDSSFAPFEYQNGKGKYTGFDMELIKKIAKQ---QGFKLDISNPGFDAALNAVQSGQ 329

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G ++  + GT +
Sbjct: 330 ADGVIAGATITEARQKI--FDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTAS 387

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+D+   +N   H   F+    +  +  +   DA   D      L    ++  +   
Sbjct: 388 YTWLSDHADKYNY--HVKAFDEASTMYDSMNSGSIDALMDDE---AVLAYAINQGRKFET 442

Query: 217 LPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                    +  A+ +G + E   + +    ++  + E     K     +  ++N    +
Sbjct: 443 PIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAK 502


>gi|148987895|ref|ZP_01819358.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147926359|gb|EDK77432.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP6-BS73]
          Length = 276

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K        ++  +      + S  A   G+   +  +    N     F   + NG+ 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEAASKKEIIVATNGSPRPFIY-EENGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  RA+      D   +++        F  L + + ++   N  +T  R      
Sbjct: 60  TGYEIEVVRAIFKD--SDKYNVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KY 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +      +    ++ K    I S+  + G S  V   TT+   L  Y   H      + 
Sbjct: 116 LYAAPIAQNPNVLVVKKDDSSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILN 175

Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +     ++I       + D    D        + N       ++     + P     + Q
Sbjct: 176 YTKADFQQIMVRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELSSDQQPYVYPLLAQ 234

Query: 233 GDTEWYNIVSW 243
           G  E  + V  
Sbjct: 235 GQDELKSFVDK 245


>gi|172059186|ref|YP_001806838.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171991703|gb|ACB62622.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 262

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NGD +GFD+D   A+  +        +++  +      AL+ 
Sbjct: 28  TLRFGLEAQYPPFESKAPNGDLQGFDIDVGNAVCQSA---KLSCKWVETSFDGLIPALKG 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  I Y      I     G + +   L G  + V   
Sbjct: 85  RKFDAINSAMNATEQR--RQAIDFTTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQA 142

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     +++   +    + ++   +  A   A R DA      A     L+      
Sbjct: 143 SIQETYAKAHWEPAGVS--VVAYQDQNQAYADLVAGRVDATLVLAPAGQRGFLSRPDGKG 200

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      +    
Sbjct: 201 FSFVGQPVRDDKILGSGIAFGLRKGDDALKAKLDAAI 237


>gi|326538690|gb|ADZ86905.1| arginine/ornithine-binding periplasmic protein precursor [Brucella
           melitensis M5-90]
          Length = 126

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 7/117 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +K +G   GFDVD  RAL   +    +K +++  +      ALQS
Sbjct: 13  KLTIGTEGAYPPFNFIKPDGTLSGFDVDIARALCDQM---KAKCEFVTQDWDGAIPALQS 69

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
            + D    +   T  R+    + F    Y    G    K   I   +   L+G +I 
Sbjct: 70  GKFDAFIASMSITDERKK--QVDFTNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 124


>gi|251782586|ref|YP_002996889.1| cystine-binding protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391216|dbj|BAH81675.1| cystine-binding protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 299

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 37  SQKSSWDTIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 93

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +        +  
Sbjct: 94  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMAKK 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 153 DLSDWKGKKAAGASGTEYMK---AAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 209

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 210 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 269

Query: 257 TQKNI 261
             +  
Sbjct: 270 ISETY 274


>gi|256380965|ref|YP_003104625.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255925268|gb|ACU40779.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 271

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 9/224 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L    +     F   + NG+  GFDVD    ++  +     +I   P         
Sbjct: 43  QEGKLVTCTHMSYEPFQFTQ-NGETVGFDVDLVNLVAKELGV-TQQIFDTPFENITSGTV 100

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
             + + D+ +     T  R+    + F    +   Q  ++ K  G+  ++ L G  + VQ
Sbjct: 101 FSTGECDLAAAGITITEKRKE--AIDFSDPYFDASQALLVKKDSGLKDLASLKGKVLGVQ 158

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT E       +A+        FE +  ++ A R    DA   D   L+         
Sbjct: 159 QGTTGEEYGNANAQANGY--EVKQFEDLPLLETAVRTGSIDAAINDNGVLFDYAKKFP-- 214

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            E  +  +  +      A+ +G+T     +         + E  
Sbjct: 215 -ETEVTAEFDTGEQYGIALKKGNTALNAKIGEVIKKAKESGEYD 257


>gi|108802342|ref|YP_642539.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119871495|ref|YP_941447.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|126438322|ref|YP_001074013.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|108772761|gb|ABG11483.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. MCS]
 gi|119697584|gb|ABL94657.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
 gi|126238122|gb|ABO01523.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. JLS]
          Length = 591

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 82/218 (37%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       + ++G + GFD +  RA++  +     ++ ++            
Sbjct: 81  GVLTVGTLSDAPPSICIDSSGQFTGFDNELLRAIAEKLG---LRVNFVGTEFSGLLAQTA 137

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           +++ D+ S +   T  R  ++G  F     F     ++     I    +L  G  I V  
Sbjct: 138 ARRFDVGSSSITTTDARRRTVG--FTNGYDFGYFSLVVPSGSPIDGFGKLGPGQRIGVVQ 195

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D  +       P++F     + A+ +  + DA+    SA     +    P+
Sbjct: 196 GTVQEAYVVDTLR-----LQPVIFPDYNTVYASLKTGQIDAWVAP-SAQAEGTVQAGDPA 249

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + +        + +A A+ + +    + ++    A++ 
Sbjct: 250 QIIE-NTFSLDNFIAYAVAKENQPLIDALNSGLDAVIA 286


>gi|319745422|gb|EFV97729.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 727

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 78/240 (32%), Gaps = 11/240 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K   ++    F      G + GFD++  + ++        K+            A+QS Q
Sbjct: 273 KIVSDSSFAPFEYQNGKGKYTGFDMELIKKIAKQ---QGFKLDISNPGFDAALNAVQSGQ 329

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G ++  + GT +
Sbjct: 330 ADGVIAGATITEARQKI--FDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTAS 387

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+D+   +N   H   F+    +  +  +   DA   D      L    ++  +   
Sbjct: 388 YTWLSDHADKYNY--HVKAFDEASTMYDSMNSGSIDALMDDE---AVLAYAINQGRKFET 442

Query: 217 LPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                    +  A+ +G + E   + +    ++  + E     K     +  ++N    +
Sbjct: 443 PIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAK 502



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 86/290 (29%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+ +FF      ++          +    +T    F    ++  +KG D
Sbjct: 1   MKHKLKAFTLALLSIFFVFGGKVSAE--------TVNIVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIVNEVAKRAGWN---VNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +++  QL G  + V+ GT  +  L +        Y    F+  +
Sbjct: 108 TYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEEN--KSKYGYKVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            ++ +  +    A   D   +            + I  +  +    A A+ +G      I
Sbjct: 166 LMNNSLDSGSIYAAMDDQPVVQFAINQGK---AYAINMEGEAVGSFAFAVKKGSGHDNLI 222

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                                   S  T N  + ++LG D +   G+  G
Sbjct: 223 -------------KEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKTTG 259


>gi|24380291|ref|NP_722246.1| putative amino acid binding protein [Streptococcus mutans UA159]
 gi|15625428|gb|AAL04076.1|AF397166_1 AtmA [Streptococcus mutans]
 gi|24378304|gb|AAN59552.1|AE015018_6 putative amino acid binding protein [Streptococcus mutans UA159]
          Length = 267

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 75/252 (29%), Gaps = 19/252 (7%)

Query: 1   MY-KDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M  K      ++    IL  T+  +  S       +  +          F+  +  G   
Sbjct: 1   MKLKHILRIGAVAFASILLLTACGSKTS-------KKTVTLATVGTTNPFSY-EKKGKLT 52

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D++  + +  A   D   ++Y        F  L S +  I + N  +T  R  +    
Sbjct: 53  GYDIEVAKEVFKA--SDKYDVKYQKTEWTSIFSGLDSDKYQIGANNISYTKER--ANKYL 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +   T  +    ++ K   I S + ++G S  V  G TT   L  + K H      + F 
Sbjct: 109 YSNPTASNPLVLVVPKDSDIKSYNDIAGHSTQVVQGNTTVSMLQKFNKNHENNQVKLNFT 168

Query: 178 RVEEI--DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234
             +           + D +           +         ++     + P       Q  
Sbjct: 169 SEDLAHQIRNVSDGKYD-FKIFEKISAETIIKEQGLDNLKVIDLPSDQKPYVYFIFAQDQ 227

Query: 235 TEWYNIVSWTHY 246
            +    V+    
Sbjct: 228 KDLQKFVNKRLK 239


>gi|227432593|ref|ZP_03914571.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351629|gb|EEJ41877.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 294

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 89/292 (30%), Gaps = 35/292 (11%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K      ++    I   +  + +A+    I          +     F    +N  + G
Sbjct: 1   MKKIWIILTTLAVSFIAMTSVTTVSAAKPNYI-------ITTDATYPPFDFQDSNNQYTG 53

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D +  + ++     +       P++      ++ S Q D +      T  R+      F
Sbjct: 54  IDQEILKTIAKR---EGFTYTLKPMSFNAATQSVTSGQADGIIAGMSITDERKEV--FDF 108

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y  G  + + K   I S+S L G ++ ++ GT          K +  K     F  
Sbjct: 109 GTPYYKSGIAWAVKKGSNIKSLSDLKGKTVALKTGTAGADYALSIQKQYGFK--VTYFND 166

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236
            + +             GD+     L+ +    ++  ++      +      A+ +G  +
Sbjct: 167 SDTLYNDVVNGNAQTTFGDLPV---LQYSIKNGTKLKVMNAKSPYASGWYGFAVKKGQNK 223

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
                    YA +                  T +  ++++LG   S   G+ 
Sbjct: 224 QLLASFNKGYAAI--------------KKDGTYDKIIKKYLGAPASDFTGKK 261


>gi|291548784|emb|CBL25046.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Ruminococcus torques L2-14]
          Length = 272

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 12/239 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M     +S   ++    T  S       + D  +R  +K G +     +  +  +G   G
Sbjct: 1   MKIKKVISACLVLTCLVTGLSGCGKTDQVSDTAERSVIKLG-SDSYPPYNYLNEDGVPTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+        +  D   ++ + ++ +++   +++  ID +                 +
Sbjct: 60  IDVELATEAFGRMGYD---VEIVNIDWEKKQELVENGDIDCIMGCFSMKG---RLDDYKW 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFE 177
                   Q   +++   I ++S L G ++ VQ+ T  E        +   K  + I  E
Sbjct: 114 VGPYMVSNQVVAVNENSDIYTLSDLEGKTLAVQSTTKPEGIFLKRTDSRIPKLGNLISLE 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             E I         DA  G         + +       IL + +    +  A  + +T 
Sbjct: 174 HRELIYTFLGKGYADA-IGAHEESVIQYMKDYDAK-FRILDEPLMTVGIGVAFSKNETR 230


>gi|251782718|ref|YP_002997021.1| glutamine-binding protein/glutamine transportsystem permease
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242391348|dbj|BAH81807.1| glutamine-binding protein/glutamine transportsystem permease
           protein [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 725

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L ++ + F +          I     +    +T    F    ++  +KG D
Sbjct: 1   MTYKLKALLLAIVSIIFMTGG--------IASTETIDIVSDTAYAPFEFKASDQVYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++                      A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIINEVAKR---QAWNYNMTFPGFDAAVNAIQSGQADALMAGTTITEARKKV--FHFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   +   S L G ++ V+ GT  +  L  + K +        F+  +
Sbjct: 108 PYYDTKIVIATRKANPVKKYSDLKGKTVGVKNGTAAQSFLDKHKKKYGY--TVKTFDTGD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +       A   D   +      N  
Sbjct: 166 LMYNSLSTGSVAAVMDDEPVIQYAISQNQD 195



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 82/260 (31%), Gaps = 15/260 (5%)

Query: 16  FFTSFSTNASILGD--IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
             TS +T         +K    +    ++    F      G + G D++  +A++     
Sbjct: 252 ATTSQATGDPTAKATPVKASYKIV--SDSSFAPFEFQNDKGKYVGIDMELIKAIAKQ--- 306

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              KI+           A+QS Q D +      T  R+      F    Y       + K
Sbjct: 307 QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSDSYYTSNVILAVKK 364

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            K I+    L+G ++  + GT++   L +    +        F+    +  +  +   +A
Sbjct: 365 GKAINRYDDLNGKTVGAKNGTSSYSWLKENAAKYGY--RVKAFDDGSTMYDSLNSGSVEA 422

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252
              D      LK    +        D IS   +  A+ +  + E   + +    A+  + 
Sbjct: 423 IMDDE---AVLKYAISQGRRFETPLDGISTGEVGFAVKKGTNPELIEMFNNGLAALKQSG 479

Query: 253 ELGITQKNINQVSKDTTNPD 272
           +      +     K     +
Sbjct: 480 KYDAIIDSYLDSKKAAKPSE 499


>gi|159904409|ref|YP_001548071.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159885902|gb|ABX00839.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 253

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 78/229 (34%), Gaps = 11/229 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           F+           IK +  L  G++  L   A +  N    GF+V+    +S  +   P 
Sbjct: 17  FSGCIGGEQNSKTIKDQ-VLTVGVSPDLPPIAYID-NEHPAGFEVELIYEISKRLDLKPE 74

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            + Y   +  E   A+   ++D        T  R   L + F     +     ++     
Sbjct: 75  FVTY---SFSELLDAVSEDEVDCAIGYIGKTPER--QLDMDFSRPYTYTYSTILVRSDST 129

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
              V  L   S+ V   +  E  L    K+  M +  I +E   +I+    + R D+   
Sbjct: 130 CVGVKCLENKSVGVLKDSVEEDWLKSLLKS--MDFKIISYENQNDINNDLLSGRIDSEVT 187

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D   + +L L     SE  I+ D      +A AI   + E    +    
Sbjct: 188 DH--IMSLYLIQKYGSELKIVGDKFDIIYVAIAIDNANPELKRSIDTAL 234


>gi|307131751|ref|YP_003883767.1| Lysine-arginine-ornithine-binding periplasmic protein [Dickeya
           dadantii 3937]
 gi|306529280|gb|ADM99210.1| Lysine-arginine-ornithine-binding periplasmic protein [Dickeya
           dadantii 3937]
          Length = 258

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 13/218 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    A G  +GFD+D   A+  A      K  +   +      ALQ+
Sbjct: 24  ELRFGLEAEYPPFESKNAKGQLEGFDIDLGNAICKA---GNFKCTWTETSFDALIPALQA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ D ++   + T  R+    + F    Y      +     G+  +   L G +I V  G
Sbjct: 81  KKFDAINSAMNITEKRKE--AIDFTTPIYRIPTQLVGKPDSGLAPTPEALKGKNIGVLQG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E+    +++          ++          A R D      +A  +  L       
Sbjct: 139 SIQEVYAKAHWEPKG--VTVTSYKDQNLAYDDLAAGRLDGTLVMAAAGQSGFLDKPEGKG 196

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHY 246
              +   +  +      +   + + D      +     
Sbjct: 197 FAFIGGPVEDTAILGSGIGFGLRKSDAALKAELDKAIK 234


>gi|83311389|ref|YP_421653.1| amino acid ABC transporter periplasmic protein [Magnetospirillum
           magneticum AMB-1]
 gi|82946230|dbj|BAE51094.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magneticum AMB-1]
          Length = 279

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 82/249 (32%), Gaps = 16/249 (6%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           MY+      +   L++      +     L  I++ G L+  I       +      G+ +
Sbjct: 14  MYRFASLIAAFSLLVLGAQPLAAAPGGKLAKIRQAGELRVCIWPDYYSISYRNTRTGNLE 73

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D  + L   +     +++++  + K     L S + DI       T  R     LA
Sbjct: 74  GIDIDMAQELGKDLG---VQVRFVDSSFKTMIDDLLSDKCDISMHAVAITPAR--QEKLA 128

Query: 118 FRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           F       G   I  K   +    S     G  +   +GT     + +  K        +
Sbjct: 129 FTRPHLRSGIFAITSKTNPVVKEWSDIDRDGVVVAAASGTFMVGVMKEELKKA----RLL 184

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                E  +    + R D +  D      +   +D        P  ++ SP A A+  GD
Sbjct: 185 EVATPEAREQEVMSGRADLFVTDYPFSRKMLARHDWAKLLTP-PTPLAPSPYAYAMAPGD 243

Query: 235 TEWYNIVSW 243
            EW + V  
Sbjct: 244 GEWLDAVDS 252


>gi|170702974|ref|ZP_02893808.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170132113|gb|EDT00607.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 264

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 84/257 (32%), Gaps = 19/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      + L        +      G       ++  ++         + +G   GF 
Sbjct: 1   MKQWMAALAVALTATTMAGAAQAGDWTGK-----EIRLAVDPTYPPLEYKRPDGTLTGFG 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    ++  ++  +       L +++ D+++ +   T  R  +L +AF  
Sbjct: 56  IDITNALCAEL---HARCVWVESSFDGMIPGLLARKFDVIASSMTITPKR--TLQIAFTN 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K    + + + L G  + V+ G+         ++   ++     ++  
Sbjct: 111 RISNAPARLIARKGSPLLPTAASLKGKRVGVEQGSAQADYAIANWQPAGVQIE--SYQNQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           +++ A     R DA      A     L   +  + + +   I  +          + + D
Sbjct: 169 DQVYADLVTGRLDAAFQASIAASDGFLKKSQGKDFMFVGAAIDDAKYFGQGDGLGLRKQD 228

Query: 235 TEWYNIVSWTHYAMVTA 251
           T+     +    A + A
Sbjct: 229 TDLREAFNRAL-ATILA 244


>gi|254250969|ref|ZP_04944287.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124893578|gb|EAY67458.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 265

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 75/241 (31%), Gaps = 15/241 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + S L D+  RG L+         ++  + +G ++G D+D   +L+ ++      ++   
Sbjct: 32  SGSRLDDVLARGTLRVCTTGDYKPYSYYRPDGRFEGIDIDMAESLAKSLGVKTDYVK--- 88

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS- 141
             +     A    + DI       TL R+      F      DG+  I+         + 
Sbjct: 89  -TSWSNLTADFVAKCDIAVGGVSTTLERQK--RAFFTQPYVVDGKAPIVRCADVDKYQTV 145

Query: 142 ---QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
                    + V  G T E     +F   N      V+     I     A + D    D 
Sbjct: 146 AQIDRPDTRVIVNPGGTNERFAKQHFTHAN----VTVYPDNVTIFKQILAGKADVMVTDA 201

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S    L+   +     V           A  + +GD  +   V    +  ++ +E     
Sbjct: 202 SETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVVFQQYVDQWLHLALSTDEYQAIS 260

Query: 259 K 259
            
Sbjct: 261 D 261


>gi|323142730|ref|ZP_08077446.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
 gi|322417481|gb|EFY08099.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
          Length = 251

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 74/234 (31%), Gaps = 15/234 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +++  + ++F  S S                   +     F+  + +G + G DV+
Sbjct: 6   KRALLAVSAVSMIFVASASVADD-------DKTYIIACDAAYAPFSWEQ-DGKYVGIDVE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++ A           P+N +     L S Q+D      +    R     L F    
Sbjct: 58  VLDAIAKASGFKYE---LKPMNFEGVIPGLISGQLDGAIAGINMNDERRKI--LDFSDGY 112

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +  G   I+ +   I+++  L G    V+ GTT  L +       N+      +    E 
Sbjct: 113 FDSGLSVIVKEDSKINTIEDLKGTRAAVKKGTTGALFVESIADKDNVTAQ--YYTSSPET 170

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             A +    D    D   +        +    + +P +         + +G  E
Sbjct: 171 MMAVKNGYADFLCEDYPVIAYQIKIGVQKGLRIAIPRVSGTPQYGFGVKKGTHE 224


>gi|237744732|ref|ZP_04575213.1| amino acid-binding protein [Fusobacterium sp. 7_1]
 gi|229431961|gb|EEO42173.1| amino acid-binding protein [Fusobacterium sp. 7_1]
          Length = 242

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 81/248 (32%), Gaps = 28/248 (11%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L L  L F +                L  G N     +  +  N    GFD++    L 
Sbjct: 1   MLILSALSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFDIELMELLG 45

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +  +   I++  ++      ALQ K+ID +      T  RE ++  +   + +  G  
Sbjct: 46  KKLGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPYVFFEGGHD 102

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            I++ K        L G ++ VQ G+  E    D          P ++    E     + 
Sbjct: 103 VIVNNKSSFKKKEDLKGKTVGVQLGSIQEQFAKD------NGSIPKLYNNFTEALLDLQN 156

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYA 247
            + DA      +      T         +  I  K P A  A  + D++     S     
Sbjct: 157 QKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADSKLAKEFSNAILE 213

Query: 248 MVTAEELG 255
           + ++ E  
Sbjct: 214 LKSSPEYA 221


>gi|228474538|ref|ZP_04059269.1| L-cystine-binding protein TcyA [Staphylococcus hominis SK119]
 gi|314935664|ref|ZP_07843016.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus hominis subsp. hominis C80]
 gi|228271201|gb|EEK12569.1| L-cystine-binding protein TcyA [Staphylococcus hominis SK119]
 gi|313656229|gb|EFS19969.1| amino acid ABC transporter, amino acid-binding protein
           [Staphylococcus hominis subsp. hominis C80]
          Length = 266

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 18/219 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M +  FV++  + +L     S ++    D K          L+ G       F       
Sbjct: 1   MKRLLFVALTLIFVLAACGNSGSSDKNSDSKSSSSNSDKKTLRVGTEGTYAPFTFHNKKD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D+D  +A++         +++   +    F  L +K+ D+++        R+   
Sbjct: 61  QLTGYDIDVIKAVAKEEGYK---LKFNETSWDSMFAGLDAKRFDVIANQVGINKERKEKY 117

Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +     ++   +  I S   + G  +  Q  T+    LA    A+      
Sbjct: 118 K--FSNPYTYSSGVLVVRDDEKNIKSFDDVKGKKLA-QTFTSNYGKLAKDKGAN-----I 169

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
              +   +      + R D    D  +    K       
Sbjct: 170 TKVDGFNQSIDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 208


>gi|239918349|ref|YP_002957907.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Micrococcus luteus NCTC 2665]
 gi|281415454|ref|ZP_06247196.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Micrococcus luteus NCTC 2665]
 gi|239839556|gb|ACS31353.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Micrococcus luteus NCTC 2665]
          Length = 273

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 18/245 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                  L     ++   +   L     + + G L    +     F   +  G+  G+D+
Sbjct: 20  LLTGCAVLGGDAGSAGIVSDDDLSTSYGLVQPGVLTVCSDIPYPPFEF-EEKGELTGYDI 78

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               A++  +      +      A E   +L    ++  + +   T  R+  +   F   
Sbjct: 79  QLVEAVAEKLGL-GVNVIDSSFEAIESGASLTGCDVN--ASSISITEARQRVMA--FTLP 133

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              D    +  K  GI+ V    G  I VQA TT +        A      P+ FE    
Sbjct: 134 YLDDDLVLVAKKGSGITDVESAKGRRIGVQAATTGDEY------AQQNGLSPVQFEDGGM 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +A   DA  G+ S    L  +        ++  + +   L  A+     +  + V
Sbjct: 188 QIQALQAGTVDAALGNQSV---LLYSLKDDDRFEVVESLPTGEQLGMAVGPQKAQLGSAV 244

Query: 242 SWTHY 246
           +    
Sbjct: 245 NRALQ 249


>gi|307711328|ref|ZP_07647748.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307616844|gb|EFN96024.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 521

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 76/259 (29%), Gaps = 29/259 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +      L+++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSLLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   +      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSTYANAKSLDDFNGAKIT-SQQGVYLYDLIGQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     + P   +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMVQVEPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWT 244
           +A  + + D     I +  
Sbjct: 227 IAIGLRKDDNRISQINTSI 245


>gi|212716470|ref|ZP_03324598.1| hypothetical protein BIFCAT_01394 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660723|gb|EEB21298.1| hypothetical protein BIFCAT_01394 [Bifidobacterium catenulatum DSM
           16992]
          Length = 312

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 12/222 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +K  G L  G+            +G    G+D+D  +A++  +   P+ +        
Sbjct: 67  DLVKD-GELSAGMELSYAPAEFYAEDGKTPVGYDIDMTKAIAKTLGLKPNIVS---SMFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + D+       T  R     + F           +          S + GA
Sbjct: 123 TIIPSIGS-KYDLGITAMTITEER--MQSVDFVSYYRAGSTWAVQKGNPKKLDTSDMCGA 179

Query: 147 SICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            I VQ GT  E       K    + K   + ++R  E   A    + DA+  D     A 
Sbjct: 180 KIAVQTGTVQEEEANTIAKGCEADNKAEVMSYKRQAEAATAVATGKADAFYADSP--VAG 237

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +    +   L D+   +    A+ +G+T+    V     
Sbjct: 238 YAISQTDGQLEALGDVEGVAKQGIAVKKGNTQLAEAVQKAVQ 279


>gi|253699667|ref|YP_003020856.1| histidine kinase [Geobacter sp. M21]
 gi|251774517|gb|ACT17098.1| histidine kinase [Geobacter sp. M21]
          Length = 608

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 84/259 (32%), Gaps = 29/259 (11%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  +  +G   G++VD  RA++  +     K+++   +  E    LQ 
Sbjct: 65  TIVVGGDRSYPPYEFIDKDGSPAGYNVDLTRAIAEVMG---MKVEFRFGSWAEMRAGLQQ 121

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            +IDIL      +   E S  + F P            +    + ++ +L G  + V   
Sbjct: 122 GKIDILQG---LSYSDERSRSVDFSPPHAMVHHAIFARRDSKRVRTLEELKGKKVIV--- 175

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPS 212
              +  + +  K    +   ++     E      + + D A    +  +Y ++      +
Sbjct: 176 -FQDGIMHERLKLLGFEKDLVLTPTPAEALRILASGQHDYAVVAQLPGMYLIREL--HLT 232

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
             V +   +        + +G+ E     +     ++   +                   
Sbjct: 233 NLVPVAKAVVSEQYGYGVAEGNRELLTRFNEGLAIVIKTGQYA---------------QI 277

Query: 273 VQRFLGIDKSSNIGEALGL 291
             R+LG+ +   +   + L
Sbjct: 278 YNRWLGVHEPPRVTREMAL 296


>gi|209546563|ref|YP_002278481.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537807|gb|ACI57741.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 268

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 80/266 (30%), Gaps = 19/266 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +    ++L   ++           A I    + R  ++  +      F  + AN   +
Sbjct: 1   MLRISLQTMLRAALMAGGLGMVLVAAAPIQAAAQDRMPMRIAVEGAFPPFNYLDANNKLQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   AL         + Q++     +    L + + D +  +   +L R     +A
Sbjct: 61  GFDIDIANALCE---VGKFECQFIIEKWDDIIPNLVADKYDAIISSMSMSLER--RQKVA 115

Query: 118 FRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y     FI  K   I   S + LSG  + V + T  E      +     K    V
Sbjct: 116 FTEKYYNSPSVFIARKDSPISDISPAGLSGKILGVTSSTAQESYANHLYPEMKKK----V 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAI 230
           F    E+         D    D  A+Y         +         +           A+
Sbjct: 172 FRSSPELYKGLSDGSVDIILEDKLAIYDWIANTKAGTCCEFKGPDLVDVTYFGEGAGIAL 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGI 256
              D E    ++    ++       +
Sbjct: 232 RLDDKERLTRLNEALKSIKADGTYDM 257


>gi|209547107|ref|YP_002279025.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538351|gb|ACI58285.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 253

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 23/200 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCG-INTGLVGFAEVKANGDWKGF 59
           M       IL   +L   + +              ++ G +N     +    A+G   G+
Sbjct: 1   MKHWGKAVILAATMLAGNANA-------------EIRFGIVNEAYPPYTTKDASGKSVGW 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   A+   +     K   + +       AL+S +ID++  +   T  R+    + F 
Sbjct: 48  EIDLMDAVCEQL---KEKCTIVDVAWDGLIPALESNKIDVIWSSMSITDERKK--RIDFT 102

Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              Y         +   +      L   ++ +   TT       +F           +  
Sbjct: 103 DKYYSSMASMAGPRDGVLGVDPEHLKDKTVGIAVSTTQSAYFKKHFA---DIATEKSYAT 159

Query: 179 VEEIDAAYRAHRCDAYTGDI 198
           V+E      + R D    D 
Sbjct: 160 VDESFQDLASGRVDYVFADT 179


>gi|118475084|ref|YP_892390.1| CjaC [Campylobacter fetus subsp. fetus 82-40]
 gi|118414310|gb|ABK82730.1| CjaC [Campylobacter fetus subsp. fetus 82-40]
          Length = 241

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 64/203 (31%), Gaps = 11/203 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L  G +     F  +  N    GFD+D   A+S     +    +++ +       AL+
Sbjct: 21  KTLIFGSDAEYPPFGYMDENNKIAGFDIDLVDAISKKAGFEY---KFIKVGFDALIPALK 77

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
             +ID ++ +   T  R+ S+  +       +     M   K I+S   L    I    G
Sbjct: 78  VGKIDAIAASMSATTERKKSVDFSSPYFYTKNLY-LKMATDKEIASKDDLKKKRIGAMLG 136

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E        A       I  E +       +A + DA   D S  Y     N    +
Sbjct: 137 TVQESVAHGIKGAK-----VIATEGIAGSIMNLKAGKVDAVIVDSSVGYGYLKKNADIVK 191

Query: 214 HVILPDIISKSPLAPAIIQGDTE 236
              L +       A A  +    
Sbjct: 192 W--LEENDGSDGFAMAFDKDKHS 212


>gi|282857094|ref|ZP_06266340.1| L-cystine-binding protein TcyA [Pyramidobacter piscolens W5455]
 gi|282585029|gb|EFB90351.1| L-cystine-binding protein TcyA [Pyramidobacter piscolens W5455]
          Length = 274

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 102/286 (35%), Gaps = 36/286 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGF 59
           M +   V++  ++     + +  A       +   ++         F     A  +W GF
Sbjct: 3   MNRKLLVALTAVVTTILGAVAFAA-------EDKVIRVATPGTYAPFTMYDDATKEWSGF 55

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +++  RA+      D   +++L  +    F  L   ++D +++    T  R       F 
Sbjct: 56  EIELWRAIGKRFGYD---VEFLRFDIPATFAELDLGRVDTVAKQISITPAR--QQKYDFS 110

Query: 120 PITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +F      +    + I S   ++G +I +  G+     +A     + +K     +E 
Sbjct: 111 RPFFFSPYFLTVAESNEEIKSWKDMAGKTIALAEGSAMNEFVAALDPDNKVKKFV--YES 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEW 237
            ++I +     R DA                 PS  + LP  + ++P L    +  D   
Sbjct: 169 DKKIFSEVSVGRIDAC----------------PSAFIELPYELKRNPALKLKFVDLDNPI 212

Query: 238 YNIVSWTHYAMVTAEELGITQKN--INQVSKDTTNPDV-QRFLGID 280
           Y  V+   +A     +  +   N  + Q+  D +   + +++ G+D
Sbjct: 213 YTEVNAYPFARTERGQALLKLANEALTQMIDDGSYAGLCKKWFGVD 258


>gi|269121059|ref|YP_003309236.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
 gi|268614937|gb|ACZ09305.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
          Length = 259

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+ +       + +++  L+ G N     F  V   G  +GFD+D    +   +      
Sbjct: 24  TAAADGGEKPAEGQEK-VLRVGTNPEFKPFEYVGEGGKTEGFDIDLMNMIGEELGYK--- 79

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136
           I++  +       AL++ +ID +      T  R+    + F    Y     ++  K    
Sbjct: 80  IEWKTMAFDGLIPALKNNEIDAIIAGMSVTEERKA--AVDFSDEYYISKFAYVRLKGDTS 137

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           ++S+  +    +  Q GT  E       +A  +    +V E +  +    +    DA   
Sbjct: 138 LNSIDDMKDKRLGAQLGTIQEQ------EAKKISEKTVVNEAITSLILELKNKNLDALVL 191

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +     A    N             +           + E    V+ T 
Sbjct: 192 EDVVASAYVSENPELEIFATKDMTDNGGTAIAFDKGKNPELIKQVNETI 240


>gi|55820257|ref|YP_138699.1| polar amino acid ABC uptake transporter substrate binding
           protein/membrane-spanning protein [Streptococcus
           thermophilus LMG 18311]
 gi|55822147|ref|YP_140588.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease [Streptococcus thermophilus CNRZ1066]
 gi|55736242|gb|AAV59884.1| polar amino acid ABC uptake transporter substrate binding
           protein/membrane-spanning protein [Streptococcus
           thermophilus LMG 18311]
 gi|55738132|gb|AAV61773.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 516

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 79/291 (27%), Gaps = 36/291 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG------ 54
           M K        L+++F    S  A          +L+ G+      F   + +       
Sbjct: 1   MKKIIIACFAALLLVFGGLSSAQADE--------YLRVGMEAAYAPFNWTQDDNSNGAVP 52

Query: 55  -----DWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ A    P  ++           AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQIAKKIAEAQGKKPLVVK---TAWTGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC--VQAGTTTELTLADYFKA 166
            R     + F    Y      ++      +    +                  L D    
Sbjct: 110 ER--RQEIDFSDRYYRSEPVMVVSSDGDYAKAKSVKDFKDAKITGQQGVYLYNLIDQIPN 167

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----II 221
            N +           +  A  +   D Y  +               + + L D       
Sbjct: 168 VNKQT---AMGDFGAMRQALASGIIDGYVSERPE-ARTAEKASSKYKMISLKDGGFQVSD 223

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               LA  + +GD++    V+     +   + + +    I+    D T+  
Sbjct: 224 DDVSLAVGLRKGDSQQMEQVNKVLAGISQEKRVKLMDHIIDIQPADKTDEA 274


>gi|313893835|ref|ZP_07827401.1| ABC transporter, substrate-binding protein, family 3 [Veillonella
           sp. oral taxon 158 str. F0412]
 gi|313441399|gb|EFR59825.1| ABC transporter, substrate-binding protein, family 3 [Veillonella
           sp. oral taxon 158 str. F0412]
          Length = 279

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 8/245 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K F +  L L +        + S    +      +       +  ++    NG+  GFDV
Sbjct: 9   KLFAIGALALGVFVVAGCGDDTSKETKVNPNAKVVNVATRGTVRPYSYTDDNGNLTGFDV 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +     +      + P+     F+A+ + Q+D+++        RE          
Sbjct: 69  ELLKEIERR--NPDLHFNFKPMAVDAAFVAMDAGQVDMIANQMRRNPTRESKYYYTNEVN 126

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV-E 180
            Y   +  + + +  IS +  L G  I V   +     +  + +  N     I  ++   
Sbjct: 127 NYSTRKLVVKNDRNDISKLDDLKGQKIAVTTSSEFNELVKQFNETANPPIDIIYTDKAGA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        R DA               DR      + D+++  P     +   T+    
Sbjct: 187 ETLNLVATGRADA--AGEYEYVINSAIKDRGLPLKAVGDVLAVVP--TYFLSKRTDDMKQ 242

Query: 241 VSWTH 245
           V+   
Sbjct: 243 VNEKI 247


>gi|171315811|ref|ZP_02905042.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171099000|gb|EDT43785.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 262

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NGD +GFD+D   A+  +        +++  +      AL+ 
Sbjct: 28  TLRFGLEAQYPPFESKAPNGDLQGFDIDVGNAVCQSA---KLSCKWVETSFDGLIPALKG 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  I Y      I     G + +   L G  + V   
Sbjct: 85  RKFDAINSAMNATEQR--RQAIDFTTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQA 142

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     +++   +    + ++   +  A   A R DA      A     L+      
Sbjct: 143 SIQETYAKAHWEPAGVS--IVAYQDQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKG 200

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      +    
Sbjct: 201 FSFVGQPVRDDRILGSGIAFGLRKGDDALKAKLDAAI 237


>gi|126641445|ref|YP_001084429.1| ArtI protein [Acinetobacter baumannii ATCC 17978]
          Length = 212

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 8/193 (4%)

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +  D  K++++   A  R   L+S + D++      T  R+    + F    
Sbjct: 3   LAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTVTPERKEV--VDFAEPY 60

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G +  K K I+ ++QL G ++ V  GT+++      F  H  K + + FER  + 
Sbjct: 61  LKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTKHYPKVNLLKFERNSDA 116

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A    R DA + D +  YAL      PS    +  I  +  +APA+ +G+T+  N ++
Sbjct: 117 FKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLN 174

Query: 243 WTHYAMVTAEELG 255
                + T+ E+ 
Sbjct: 175 TEIKQLRTSGEIK 187


>gi|91787286|ref|YP_548238.1| extracellular solute-binding protein [Polaromonas sp. JS666]
 gi|91696511|gb|ABE43340.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 288

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 76/226 (33%), Gaps = 16/226 (7%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F   ILC ++       + NA  L  + ++  L       + G       G   G+
Sbjct: 1   MKKTFIARILCALLATGVMLPAANAQALQTV-EKDALTIAFTGDMPGTGYQD--GAMIGY 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D +  + ++ A+     K++   +       ++Q+K++D+++    WT  R   + L+  
Sbjct: 58  DGEILQRVAEAV---KLKVKPALMEWSGTIASVQAKRVDVMAGTMGWTEQRSKIMTLSDP 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G     K   S +  L G  +    G +    L              +++  
Sbjct: 115 IHY--FKNGITQSSKTNWSHLKDLEGKKVGTITGFSFIPELRKI-----TGLQLTMYDTS 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           +       A R DA  GD   +      +  P   +     +  +P
Sbjct: 168 DAAVRDLLAGRIDAVIGDPPVM--QYAISRNPQWKLKFNAFVDNNP 211


>gi|315639958|ref|ZP_07895088.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
 gi|315484283|gb|EFU74749.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
          Length = 269

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 88/267 (32%), Gaps = 21/267 (7%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGD 55
           M K F   +S+   +++F    S+N S         +   LK G             N  
Sbjct: 1   MKKRFGYIISLAAALVVFSACSSSNNSSDSSSSTTSEEKVLKVGSTGQSYPNGYK-ENDK 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFDV+    ++  +      +++   +       L+S ++D ++     T  R+ +  
Sbjct: 60  LVGFDVEVLETIAKDLGYK---VEWTTTDFSGLMAQLESGKLDTVANAVAMTDERKET-- 114

Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F     + G   +   K   I+S+  L G ++    G+     L  Y K  N      
Sbjct: 115 YNFADPYSYYGAQIVTSTKNTDINSLDDLKGKTVAGVLGSNNLKNLQAYDK--NGDITIR 172

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-------RPSEHVILPDIISKSPLA 227
            +E  +        +R D Y      L A    ++        P  +  +    +K+ + 
Sbjct: 173 TYETRDGALQDAVNNRVDGYINSRPILAAEIKKSNLALKYVGDPIAYESVSFPFAKTEVG 232

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             + +  +     +  +      +E+ 
Sbjct: 233 SKLAKEFSTEIKKLRESGKLKELSEKY 259


>gi|259046647|ref|ZP_05737048.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding
           cassette transporter, polar amino acid-binding protein
           [Granulicatella adiacens ATCC 49175]
 gi|259036812|gb|EEW38067.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding
           cassette transporter, polar amino acid-binding protein
           [Granulicatella adiacens ATCC 49175]
          Length = 295

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 27/265 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------------LGDIKKRGFLKCGINTGLVGF 47
           M K      + +  L     +                     I + G +K      L   
Sbjct: 5   MKKWMKAGFVAVATLLAACGANTTKTQETTVSVSDAQANWDKIVESGVIKVSTAGTLYPQ 64

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           +    N +  G+DV+  + ++  +     K+++  +       AL S   D    N    
Sbjct: 65  SFHNDNNELTGYDVEIMKEVAKRL---NLKVEFTEMGVDGMLTALDSGMTD--IANYSIE 119

Query: 108 LLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
              +            +     ++      GI S + + G      A T          K
Sbjct: 120 EGAKNFDDYLHTTPHKYSFTSMVVRGSDNSGIHSWADVKGKKAAGAASTNYMKI----AK 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
               +         +   +     R D    D               + + + + +  +P
Sbjct: 176 KLGAELVVYDNVTNDVYMSDLVNGRTDVIINDYYLQSIAVAFAKDKYD-IKINEGVYANP 234

Query: 226 L--APAIIQGDTEWYNIVSWTHYAM 248
              + +I   +T   +  +    AM
Sbjct: 235 YSSSFSISLNNTVLRDKFNEAMDAM 259


>gi|253584248|ref|ZP_04861446.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium varium ATCC 27725]
 gi|251834820|gb|EES63383.1| ABC superfamily ATP binding cassette transporter binding protein
           [Fusobacterium varium ATCC 27725]
          Length = 252

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 79/221 (35%), Gaps = 7/221 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             + +I K+G ++ G       F  +  +  ++G+D++  + ++  +      ++++P  
Sbjct: 21  DKVEEIMKKGVIRIGTTGDYKPFTYLNGD-KYEGYDIEVAKLIAKELGVK---VEFIPTT 76

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
            K     L   + D+       T+ R++   ++   + +         +K+  +S+  ++
Sbjct: 77  WKTLISDLNEDKYDVAMGGITRTVKRQVEAQMSNPYLIFGKCYLVRKGEKEKYNSIEAVN 136

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             S+ V         +  +   H  K   I ++   ++  A      D    +       
Sbjct: 137 KPSVKVGVNIGGTNEI--FADEHLSKATIIRYKNNLDVPVAVEKGEVDVMVTENPE-AIT 193

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +   E  +    ++KS +   + +      N +++  
Sbjct: 194 YEKINSKLEGALTEATLTKSQMGYMVHKDQQHLLNTINFIL 234


>gi|291456218|ref|ZP_06595608.1| ABC transporter, substrate-binding component [Bifidobacterium breve
           DSM 20213]
 gi|291381495|gb|EFE89013.1| ABC transporter, substrate-binding component [Bifidobacterium breve
           DSM 20213]
          Length = 317

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGTDTSYAPAEFLAEDGRTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPKKIDTSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 184 KVAVQTGTTQEEEVNKDNEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 241

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 242 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 285


>gi|289168412|ref|YP_003446681.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
 gi|288907979|emb|CBJ22819.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis
           B6]
          Length = 266

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETNSQKTIVVATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFKRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|167838405|ref|ZP_02465264.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           thailandensis MSMB43]
          Length = 257

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 71/217 (32%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG+ +GFD+D   A+           +++  +      ALQ 
Sbjct: 23  TLRFGLEAQYPPFESKAANGELQGFDIDVGNAVCKEA---KLACKWVETSFDGLIPALQG 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  +   L G  I V  G
Sbjct: 80  RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLAPTPESLRGRRIGVLQG 137

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   ++ A   A R D       A     L+      
Sbjct: 138 SIQETYANAHWA--GAGVQVVAYQDQNQVYADLMAGRLDGTLVLAPAGQRGFLSRPDAKG 195

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 196 FAFVGQPVRDDKILGSGIAFGLRKGDDALKARLNAAI 232


>gi|134102290|ref|YP_001107951.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914913|emb|CAM05026.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 780

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 100/299 (33%), Gaps = 28/299 (9%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +  + +L     S  AS   ++     L  G++     +     +G   GFDVDF RAL+
Sbjct: 1   MFLIGLLLAGCSSGGASGRPELVAPDRLTVGVDLSYPPYNYFD-SGRPSGFDVDFDRALA 59

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +   P    ++  + ++    L++++ D+       T  R     + F P  +  G  
Sbjct: 60  QRMGLRPE---FVDTSFEQLIAGLKAQRYDVAISALYITPDRAK--EIDFVP-YFTTGNS 113

Query: 129 FIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHN-----MKYHPIVFERVEE 181
            ++     +     ++L G  + V  G      L +   A              F     
Sbjct: 114 LVVRTDSPLRPAGPAELCGQRVGVIKGGQIVTQLREQAGAACVREGRPGIDVREFASDPV 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  A + D      +A+    + +      +    ++  + +   + +G+      V
Sbjct: 174 ATQALIAGQLD-VQATDAAVAKAAVDHSGSGLMITSSGLLYPTSVGIGLARGNPALKEQV 232

Query: 242 SWTHYAMVTAEELG--ITQKNINQVSKDTTNPDVQRF-LGIDKSSNIGEALGLTKDWTY 297
           +     +  + E    + + N+        +P++ R  LG     +     G   DW Y
Sbjct: 233 TKAFEELKASGEYDRLLQRYNLR-----PVDPELVRANLGTPGEDD---DFGF--DWAY 281


>gi|55820386|ref|YP_138828.1| ABC transporter substrate binding protein [Streptococcus
           thermophilus LMG 18311]
 gi|55736371|gb|AAV60013.1| ABC transporter substrate binding protein [Streptococcus
           thermophilus LMG 18311]
          Length = 282

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 78/250 (31%), Gaps = 12/250 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWKG 58
            K   ++ + +  +   +  ++ S     K  G    +          F+  + NG+  G
Sbjct: 4   KKILGITGVAIASVALLAACSSKSPKEASKSSGAKETINFATVGITAPFSY-EENGELTG 62

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+  +A+      D  ++++        F  L S +  +   N       E +    F
Sbjct: 63  YDVEVAKAVFK--NSDKYEVKFKKTEWSSVFTGLDSAKYQMAGNNIS--YSEERAQKYLF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                       + K   I     ++G S  V  GT+T   L ++   H+ K   + +  
Sbjct: 119 SYPIATTPAVLTVPKDSNIKKYDDIAGHSTQVVQGTSTVTQLTEFNDKHSDKPVELNYTN 178

Query: 179 VE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDT 235
               ++       + D +    +      + N++ S    +     + P           
Sbjct: 179 ENIEQMLTNLNEGKYD-FKIFEAQTVNAIIKNNKLSNLKTIELKSDEQPYIYFLFADNQK 237

Query: 236 EWYNIVSWTH 245
           +    V+   
Sbjct: 238 DLQKFVNKRL 247


>gi|116627214|ref|YP_819833.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|116100491|gb|ABJ65637.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
 gi|312277695|gb|ADQ62352.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           ND03]
          Length = 282

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 78/250 (31%), Gaps = 12/250 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWKG 58
            K   ++ + +  +   +  ++ S     K  G    +          F+  + NG+  G
Sbjct: 4   KKILGITGVAIASVALLAACSSKSPKEASKSSGAKETINFATVGITAPFSY-EENGELTG 62

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+  +A+      D  ++++        F  L S +  +   N       E +    F
Sbjct: 63  YDVEVAKAVFK--NSDKYEVKFQKTEWSSVFTGLDSAKYQMAGNNIS--YSEERAQKYLF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                       + K   I     ++G S  V  GT+T   L ++   H+ K   + +  
Sbjct: 119 SYPIATTPAVLTVPKDSNIKKYDDIAGHSTQVVQGTSTVTQLTEFNDKHSDKPVELNYTN 178

Query: 179 VE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDT 235
               ++       + D +    +      + N++ S    +     + P           
Sbjct: 179 ENIEQMLTNLNEGKYD-FKIFEAQTVNAIIKNNKLSNLKTIELKSDEQPYIYFLFADNQK 237

Query: 236 EWYNIVSWTH 245
           +    V+   
Sbjct: 238 DLQKFVNKRL 247


>gi|322391487|ref|ZP_08064956.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
 gi|321145570|gb|EFX40962.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
          Length = 543

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 86/287 (29%), Gaps = 40/287 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K  F  +  L +         A          +L+ G+      F       +NG  K
Sbjct: 23  MKKLCFSILASLALTLGLVSQVQADE--------YLRVGMEAAYAPFNWTQDDDSNGAVK 74

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 75  IEGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 131

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+    +AF    Y      ++ K        S+   SGA I  Q G      ++    
Sbjct: 132 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLDDFSGAKITSQQGVYLYNLISQIPG 189

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  A   DAY  +       +  N +       P   +   
Sbjct: 190 AQKET----AMGDFAQMRQALEAGVIDAYVSERPEALTAESANAKFKMIQPQPGFKTGEE 245

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
              +A  + + D     I      A +           ++++ K+  
Sbjct: 246 DTAIAIGLRKDDKRISQI-----NASIETISTDEQIALMDRMIKEQP 287


>gi|157150410|ref|YP_001450999.1| amino acid-binding permease protein [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075204|gb|ABV09887.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 521

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 79/259 (30%), Gaps = 28/259 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K FF SIL LI+L F +          ++   +L+ G+      F             
Sbjct: 1   MKKIFF-SILSLILLTFGAS-------QIVQADEYLRIGMEAAYAPFNWTQDDDSNDAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +   P  ++    +      AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKELGKKPLIVK---TSWNGLIPALTSGKIDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +    L          +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVVLVQKNGAYAQAKTLDDFKGAKIT-SQQGVYLYNLISQLK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLA 227
                       ++  A  +   D Y  +   AL A    +            + K   +
Sbjct: 167 GAKQETAMGDFAQMRQALESGVIDGYISERPEALTAEAANSSFKMIQFEKGFEVGKEDAS 226

Query: 228 PAII-QGDTEWYNIVSWTH 245
            AI  Q D +    V+   
Sbjct: 227 IAIGMQKDDQRMAKVNEAI 245


>gi|15674925|ref|NP_269099.1| putative ABC transporter binding protein [Streptococcus pyogenes M1
           GAS]
 gi|13622067|gb|AAK33820.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           M1 GAS]
          Length = 299

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 85/269 (31%), Gaps = 15/269 (5%)

Query: 1   MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   +  + L  L         +  S    IK++G LK          +    N +  
Sbjct: 13  MKKSVTLLSIGLASLLLAACAPHQSQKSSWDTIKEKGVLKVATPGTYQPTSFYNDNNELV 72

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++VD  + +   +     K++++     + F ++ S ++DI   N D T  R+    ++
Sbjct: 73  GYEVDMVKEIGKRL---NIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNIS 129

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   G   +        +   LS       AG +    +     A       + ++
Sbjct: 130 TPYKYGVGGM-IVRADGSSNIAKKDLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYD 185

Query: 178 RV--EEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQ 232
            V  +         R D    D  A   +   + +  P+ +V + D+    +     + +
Sbjct: 186 NVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNK 245

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            D      +      M+    L    +  
Sbjct: 246 KDDSLKKKIDAVIKDMIKDGSLKKISETY 274


>gi|322390972|ref|ZP_08064478.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142347|gb|EFX37819.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 520

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 83/284 (29%), Gaps = 29/284 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K  F  +  L I    +   +A          +L+ G+      F       ANG  K
Sbjct: 1   MKKTLFALLTGLFICLGITQVVHAD--------DYLRIGMEAAYAPFNWTQEDDANGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +   P  ++    +      AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKVAEELGKKPLIVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    ++ + L          +   + L        
Sbjct: 110 ERKKEVA--FSKSYYTSEPVMLVRKDGNYANATTLDDFKDAKVT-SQQGVYLYSLISQLK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       ++  A  +   DAY  +       +  N +                A 
Sbjct: 167 GAKQETAMGDFAQMRQALESGVIDAYVSERPEALTAESANSKFKMIQFKKGFEVGEEDAT 226

Query: 229 AIIQGD--TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
             I         + V+    A +++E+      ++ +    +++
Sbjct: 227 IAIGMKKGDTRIDQVNAAL-AKISSEDQVKLMDDMIKKQPASSD 269


>gi|254713634|ref|ZP_05175445.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           ceti M644/93/1]
 gi|254716012|ref|ZP_05177823.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           ceti M13/05/1]
 gi|261217779|ref|ZP_05932060.1| extracellular solute-binding protein [Brucella ceti M13/05/1]
 gi|261321373|ref|ZP_05960570.1| extracellular solute-binding protein [Brucella ceti M644/93/1]
 gi|260922868|gb|EEX89436.1| extracellular solute-binding protein [Brucella ceti M13/05/1]
 gi|261294063|gb|EEX97559.1| extracellular solute-binding protein [Brucella ceti M644/93/1]
          Length = 281

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINSERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAII 231
             +F    +   A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNDSFLAVANGTSDAALAGLPVL--QNLMNQRPGIFELVGKASDIPCYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|19704522|ref|NP_604084.1| amino acid-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19714802|gb|AAL95383.1| Amino acid-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 239

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 74/214 (34%), Gaps = 12/214 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G N     +  +  N    GFD++    L   +  +   I++  ++      A
Sbjct: 7   AAKKLYVGTNAEFKPYEYL-ENNKMVGFDIELMELLGKELGYE---IKWQDMSFDGLLPA 62

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ K+ID +      T  RE ++  +   I +  G   I++ K       +L G +I VQ
Sbjct: 63  LQMKKIDAVIAGMSATPEREKAVSFSIPYIFFEGGHSVIVNSKSTFKKKEELKGKTIGVQ 122

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT  E    D          P ++    E     +  + DA      +      T    
Sbjct: 123 LGTIQEQFAKD------NGSVPKLYNNFTEALLDLQNQKIDAVIIAEVSANEYLKTMKGV 176

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   + D +  + +A    + D++     S T 
Sbjct: 177 KKIDTIKDKLPNASIA--FRKADSKLAKEFSDTI 208


>gi|168482852|ref|ZP_02707804.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC1873-00]
 gi|172043838|gb|EDT51884.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC1873-00]
          Length = 266

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---LSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATINFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|115350166|ref|YP_772005.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115280154|gb|ABI85671.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 281

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F     NGD +GFD+D   A+  +        +++  +      AL+ 
Sbjct: 47  TLRFGLEAQYPPFESKAPNGDLQGFDIDVGNAVCQSA---KLSCKWVETSFDGLIPALKG 103

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  I Y      I     G + +   L G  + V   
Sbjct: 104 RKFDAINSAMNATEQR--RQAIDFTTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQA 161

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     +++   +    + ++   +  A   A R DA      A     L+      
Sbjct: 162 SIQETYAKAHWEPAGVS--IVAYQDQNQAYADLVAGRVDATLVLAPAGQRGFLSRPDGKG 219

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      +    
Sbjct: 220 FAFVGQPVRDDKILGSGIAFGLRKGDDALKAKLDAAI 256


>gi|59710615|ref|YP_203391.1| cystine-binding protein [Vibrio fischeri ES114]
 gi|59478716|gb|AAW84503.1| cystine-binding protein [Vibrio fischeri ES114]
          Length = 250

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 88/247 (35%), Gaps = 19/247 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +  L +   T+    A+          +K G++     F  VK +   +GF+VD
Sbjct: 2   KWTKNILAGLALTLATTQFAQAAT--------EVKVGMSGRYFPFTFVKQD-KLQGFEVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +      +   ++Y+  +    F  L++ +ID +S     T  RE      F    
Sbjct: 53  LWDEIGRR---NDYNVEYVTASFSGLFGLLETGRIDTISNQITKTKEREA--KYLFADPY 107

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             DG    + K    I S+  L+G ++ V  G+  E  L D+ K+   + +   ++   E
Sbjct: 108 VVDGAQITVRKGNDSIKSIDDLNGKTVAVNLGSNFEKLLRDHDKS--EQINIKTYDTGIE 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R DA+  D  +   L   +  P +    P    ++       +   +    V
Sbjct: 166 --HDVALGRADAFVMDRLSAAQLIKKSGLPLQLAGKPFETIENAWPFVNNEKGQKLQKEV 223

Query: 242 SWTHYAM 248
           +    AM
Sbjct: 224 NQALNAM 230


>gi|256391355|ref|YP_003112919.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256357581|gb|ACU71078.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 355

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 80/240 (33%), Gaps = 18/240 (7%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
               L  I+KRGFL  GI+     F    + + + +GFDVD  R ++ AIF     IQ+ 
Sbjct: 87  AGGTLDKIRKRGFLIAGIDLNTELFGYDPQHDNNPQGFDVDMARQMARAIFGSDGHIQFR 146

Query: 82  PLNAKERFLA----LQSKQIDILSRNTDWTLLR-EISLGLAFRPITYFDGQGFIM----- 131
            +   +        L +  +D++ + T  T  R + +  ++F    Y      +M     
Sbjct: 147 VVTLGDPKTGEYAQLHAGNVDLVVQTTTITCARMQGAQRMSFSNPYYTAQLKLLMALGDD 206

Query: 132 -HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              +       +     +C  A +T+   +       N    P       +  A  +   
Sbjct: 207 GKPQSASLESLKGKNVKVCATANSTSIGEIGQVLGKTNAFPAPNAL----DCLAYLQQDE 262

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 D + L    +T   P   +       K P          +  ++  + + A+  
Sbjct: 263 VGGIFTDDAILLG--MTRQDPHVAMTTAPAEEKQPYGIVTNYDAGKANDLTPFVNTALAN 320


>gi|225854841|ref|YP_002736353.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae JJA]
 gi|225722712|gb|ACO18565.1| ABC transporter substrate-binding protein - glutamine-binding
           protein [Streptococcus pneumoniae JJA]
          Length = 228

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 14/214 (6%)

Query: 38  CGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
              +     F     V       G D+D  +A++  +      ++   ++      +LQ+
Sbjct: 1   MATSPDYAPFEFQSLVDGKNQVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQT 57

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQA 152
            + D+       T  R+      F    Y +   F++ K        ++ L  A+I  Q 
Sbjct: 58  GKADLAVAGISATDERKEV--FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQK 115

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + +                + E     +A + DA   D     +    N   +
Sbjct: 116 GTVPESMVKEQLPKA----QLTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLA 171

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +   +      A A+ +   +   +V     
Sbjct: 172 VATVSLKMKDGDANAVALRKNSDDLKEVVDKVIQ 205


>gi|225868396|ref|YP_002744344.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225870677|ref|YP_002746624.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
 gi|225700081|emb|CAW94153.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
 gi|225701672|emb|CAW98990.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 288

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 76/249 (30%), Gaps = 8/249 (3%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +  S   +    IK +G LK          +      +  G++VD  + +   +    
Sbjct: 20  CGSQPSAQKTSWEKIKDKGVLKVATPATYQPTSYYNDANELVGYEVDLMKEIGKRL---D 76

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++++     + F ++ S ++D+   N D T  R+    ++        G   +     
Sbjct: 77  LKVKFIETGYDQAFTSVDSGRVDVSLNNFDITAKRQKKYNISTPYKYGVGGM-IVRADGS 135

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              S + LS       AG +    +    K    +         +         R D   
Sbjct: 136 SGISKADLSDWKGKKAAGASGTEYMK-VAKKQGAELVTYDNVTGDVYLNDVANGRTDFIP 194

Query: 196 GDISAL--YALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            D  A   +   + +  P+ +V + D+  + +     + + D      +      M    
Sbjct: 195 NDYPAQKLFVDYMKSQNPNLNVKMSDVLYNPTAQGIIMSKKDDTLKKKIDAVIKDMKQDG 254

Query: 253 ELGITQKNI 261
            L    K  
Sbjct: 255 SLKTISKTY 263


>gi|296156612|ref|ZP_06839450.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295893211|gb|EFG72991.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 303

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 67/217 (30%), Gaps = 11/217 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           AS+   IK  G +     +    F  +       G D++   AL   +      I+ +  
Sbjct: 50  ASLPQKIKDAGVVNAATESDYPPFDFLDDKNQLTGADIELSHALGQVLG---VPIRNVNT 106

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +       +Q+ + D+   +      RE ++   F                KG  S+  +
Sbjct: 107 DFSAIIPGIQAGRFDVGISSIGDYTSRESTM--DFVDYYQGGTSFLTKQGAKGPKSMDDV 164

Query: 144 SGASICVQAGTTTELTLA---DYFKAHNMKYHPI-VFERVEEIDAAYRAHRCDAYTGDIS 199
            G  + V  GT++E       DY   H      +  +        A  + R  + +GD S
Sbjct: 165 CGTIVGVLKGTSSETQAKSTSDYCTLHGKPAVTVNAYPTQSAAILALTSGRIQSVSGD-S 223

Query: 200 ALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235
           A      +N           +    P    A+ +   
Sbjct: 224 ATNGYSASNPSLKIVNGGQTVYGDRPYYGIAVPKNSP 260


>gi|301169918|emb|CBW29522.1| arginine transporter subunit [Haemophilus influenzae 10810]
          Length = 239

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 82/259 (31%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAVSAQ--------------ELTFAMEPSYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I       ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QVTCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 ++ R D   GD + L  +      P    I   + +K      L  A+ + + +
Sbjct: 154 NAILDLKSGRIDIILGDTAVLSDMIS--KEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKD 211

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 212 LAAQLNKGLAAIKANGEYQ 230


>gi|309799401|ref|ZP_07693640.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus infantis SK1302]
 gi|308116966|gb|EFO54403.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus infantis SK1302]
          Length = 280

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 80/258 (31%), Gaps = 18/258 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K    S L  + L                A+       +  +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGEKKEAASGDATTAKKEIIVATNGSPKPFIY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   +++        F  L + + ++   N  +T  R  
Sbjct: 60  NGELTGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKER-- 115

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
           +    +      +    ++ K    I S+  + G S  V  GTT+   L +Y K H    
Sbjct: 116 ADKYLYAAPIAQNPSVLVVKKDDDSIKSLDDIGGKSTEVVQGTTSAKQLEEYNKQHADNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I       + D    D        + N       ++     + P    
Sbjct: 176 TVLNYTKADFQQIMGRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|145627955|ref|ZP_01783756.1| probable amino-acid ABC transporter binding protein [Haemophilus
           influenzae 22.1-21]
 gi|144979730|gb|EDJ89389.1| probable amino-acid ABC transporter binding protein [Haemophilus
           influenzae 22.1-21]
          Length = 117

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 5/120 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F + L    + F++FS    I   ++K   L  G       F     +G   GFD
Sbjct: 1   MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R ++  +     K+++        +  L +K+ D+++  T      E    + F  
Sbjct: 61  VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKIQFHN 115


>gi|331702002|ref|YP_004398961.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129345|gb|AEB73898.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus
           buchneri NRRL B-30929]
          Length = 279

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 81/260 (31%), Gaps = 30/260 (11%)

Query: 1   MYKD-----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54
           M +        + +  ++ L  T      S       +G L    +  L   +       
Sbjct: 1   MRRIKFRWLMLLGVFAVLGLVITGCGQKKSA-----DKGPLTVATSGTLYPTSFHDQKTN 55

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFDV+  RA++  +      + +  +N   +  A+++ + D+ + +   +  R+   
Sbjct: 56  KLTGFDVEVVRAVAKKLGRK---VDFKEMNVDGQETAVKTGKADMAANDFSVSPQRQKEF 112

Query: 115 GLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            L             I+ K    GI S + + G     +AGT     LA    A  + Y+
Sbjct: 113 AL--STPYKHSFNSIIVRKKGDSGIHSWADIKGKKAAGEAGTDY-QRLAKQLGAKTVNYN 169

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPL 226
            +     +       + + D    D                   P+ +    +      +
Sbjct: 170 NV---SNDVYLRDVESGKTDLIMNDYYLQKLALAAVPNNTLKIMPNMYFRTNEDGKG--V 224

Query: 227 APAIIQGDTEWYNIVSWTHY 246
              + +G+T+    V+    
Sbjct: 225 GILMKKGNTKLQKQVNKALK 244


>gi|323698837|ref|ZP_08110749.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323458769|gb|EGB14634.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 283

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 75/242 (30%), Gaps = 15/242 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M + F FV+++    L     +    +L ++K+RG L          F  +  +G   G+
Sbjct: 1   MIRGFKFVALMLACFLMLGVQAQAKDLLSEVKERGELVVATEARFAPFEML-KDGKIVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    +   +           L  +     L +K+ D +  +   T  R      AF 
Sbjct: 60  SKDLLDEIMKDLPGVKLNQL--DLPYQGILAGLVAKRYDFVCTSLTITKERAA--KYAFT 115

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTT-TELTLADYFKA------HNMKY 171
                     +       I S   ++G  I +QAG       L DY K            
Sbjct: 116 LPFSTAALTIVKRAGDDSIKSGEDMAGRIIGIQAGAAPYFTALKDYEKEVLIPKYGKGVA 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               F   ++  AA    R DA    +  L  L          +++P     +  A A  
Sbjct: 176 ELQEFISSDDAYAALAGKRVDAVINTVPNLAPLVKERPD-VFEIVMPPFGPPTYFAWAGR 234

Query: 232 QG 233
           + 
Sbjct: 235 KD 236


>gi|298293526|ref|YP_003695465.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296930037|gb|ADH90846.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 284

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 71/239 (29%), Gaps = 11/239 (4%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            + F+  +    +L   K +G L  G       F  V  +G   G + +    +   +  
Sbjct: 24  TMSFSGLAKAEDVLAKAKAKGELTVGTELQFAPFDFV-EDGKQAGMNKEIFAEIGKELGV 82

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
               I +L L        L++ + D+++     T  R       F           +  K
Sbjct: 83  K---ITFLDLPWPSVLPGLEAGKFDMVAGPATITKAR--MERYRFSSPIANATVAILKKK 137

Query: 134 KKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAHRC 191
               I+    ++G  +     T     L ++ K  N        +    +  A   A R 
Sbjct: 138 GDTSITKPEDIAGKKVGSAKATAQLAQLQEFAKTLNPPPSAIQEYVDFSQSYADLGAGRI 197

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            A    +  +  L     +P    ++     K P+    I    E    +     A++ 
Sbjct: 198 VAVANSLPNIAFLA--KTKPDVFEVVQPPFGK-PVYFGYIGTKAEDAKSLMDAVDAIII 253


>gi|269120913|ref|YP_003309090.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
 gi|268614791|gb|ACZ09159.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
          Length = 279

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 91/282 (32%), Gaps = 31/282 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K   +  L L+++  T+     S     K+    + G+  G   F       +NG  K
Sbjct: 1   MIKKINLFALILMLVVLTACGKGGSGGEGKKESNEFRVGMECGYAPFNWFQSDDSNGAVK 60

Query: 58  --------GFDVDFCRALSSAIFDDPSKIQYLPLNAKE-RFLALQSKQIDILSRNTDWTL 108
                   G+DV+  + ++  +  +   +  +  +       ALQS +ID +      T 
Sbjct: 61  NSSNGYCGGYDVEIAKLVAKGLGKE---LVIVQTDWDGLLGPALQSGKIDAVIAGMSPTT 117

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R+    L F    Y      ++    K     ++    GA I  Q  T     +     
Sbjct: 118 ERKE--SLDFTSPYYKSDLVVVVAKDGKYANAKTLEDFQGAKITGQLNTLHYTVIDQLTG 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A+         E    +  A  + + D Y  +     A +  N    +++          
Sbjct: 176 ANKQT----AMENFPAMIVALNSGKIDGYVSERPGAMAAETANPN-LKYITFEKGKGFEY 230

Query: 226 ------LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
                 +A  + +G+T+  + +      +   E   I +  I
Sbjct: 231 SNEEVDVAVGLKKGNTDLKDQIDKILAGITEEERQKIMEDAI 272


>gi|68249726|ref|YP_248838.1| arginine-binding periplasmic protein [Haemophilus influenzae
           86-028NP]
 gi|68057925|gb|AAX88178.1| arginine-binding periplasmic protein [Haemophilus influenzae
           86-028NP]
          Length = 239

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 82/259 (31%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F      G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAVSAQ--------------ELTFAMEPSYPPFETTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QATCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 ++ R D   GD + L  +      P    I   + +K      L  A+ + + +
Sbjct: 154 NAILDLKSGRIDIILGDTAVLSDMIS--KEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKD 211

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 212 LAAQLNKGLAAIKANGEYQ 230


>gi|209559253|ref|YP_002285725.1| Putative ABC transporter [Streptococcus pyogenes NZ131]
 gi|209540454|gb|ACI61030.1| Putative ABC transporter [Streptococcus pyogenes NZ131]
          Length = 287

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 25  SQKSSWDTIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +           
Sbjct: 82  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMVKK 140

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 141 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 197

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 198 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 257

Query: 257 TQKNI 261
             +  
Sbjct: 258 ISETY 262


>gi|241554218|ref|YP_002979431.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863524|gb|ACS61186.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 268

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 71/233 (30%), Gaps = 16/233 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + R  ++  +      F  + +N   +GFD+D   AL         + Q++     +   
Sbjct: 34  QDRMPMRIAVEGAFPPFNYLDSNNKLQGFDIDIANALCE---VGKFECQFIIEKWDDIIP 90

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASI 148
            L + + D +  +   +L R     +AF    Y     FI  K   IS  S + LS   +
Sbjct: 91  DLVADKYDAIISSMSMSLER--RQKVAFTEKYYNSPSVFIARKDSSISDVSPAALSDKIL 148

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            V + T  E      + A        VF    E+         D    D  A+Y      
Sbjct: 149 GVTSSTAQESYANHLYPAMKKT----VFRSSPELYKGLADGSVDIILEDKLAIYDWIANT 204

Query: 209 DRPSEHVI-----LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
              S         +           A+   D E    ++    ++       +
Sbjct: 205 KAGSCCEFKGPDLVDVTYFGEGAGIALRLDDKERLTRLNEALKSIQADGTYDM 257


>gi|222106578|ref|YP_002547369.1| ABC transporter substrate binding protein (glutamine)
           [Agrobacterium vitis S4]
 gi|221737757|gb|ACM38653.1| ABC transporter substrate binding protein (glutamine)
           [Agrobacterium vitis S4]
          Length = 250

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 9/217 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G       +  + ++G + GFD++    ++  +     ++ +          ++ 
Sbjct: 18  KVISVGTMGDSKPYTFITSDGQFTGFDIELFLNVAERMGFKKDQVVFTGQEFSALMPSVA 77

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D+       T  R+ +  + F           +      I+  + L G  + V  G
Sbjct: 78  NGRFDVAVAAIGTTEARKKT--VDFSDGYLAGYLSVLTP-DAKITDAAGLKGKRLGVVQG 134

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E+     FK        + F       +A      DA+  D  A             
Sbjct: 135 TLQEIYATKNFK----DTDLVKFPDNNSAVSALNNGTVDAHFLDYEAAKDYTDRFKALKI 190

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            V +P     +P    I +G+       +   +A + 
Sbjct: 191 AVNIP--SFDAPAGFVIRKGNDGLREAFNKGLHAAMQ 225


>gi|218282661|ref|ZP_03488876.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989]
 gi|218216424|gb|EEC89962.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989]
          Length = 538

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 70/218 (32%), Gaps = 27/218 (12%)

Query: 1   MYK--DFFVSILCLIILFFTS----------FSTNASILGDIKKRGFLKCGINTGLVGFA 48
           M K   F  + L   ++  +S           ST   +L  I++RG L  G +       
Sbjct: 30  MKKGFRFISAFLVSFMIMMSSIMPAFADETDTSTTGDLLDKIQERGELVVGTSPDFPPNE 89

Query: 49  EVKANG----DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
            + +       + G D++  + ++  +      +     +       LQ+++ID+     
Sbjct: 90  FIDSTKTGQAQYVGSDIELAKYIAKKMGVK---LTIKASSFDTVLANLQTEEIDLAITGL 146

Query: 105 DWTLLR----EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
            +T  R    E+S+G      T           ++    ++ L+G  +  Q G+  +   
Sbjct: 147 AYTPARAQQMEMSIGYNMTEDTGGQAVIISKKDEEKYKKLTDLTGLKVAAQQGSIQQQYT 206

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            D                +++  A  +     A     
Sbjct: 207 EDQIP----DAKLQSISSIDDGVALLKNGTVQAVACSE 240


>gi|145635028|ref|ZP_01790734.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittAA]
 gi|148826211|ref|YP_001290964.1| arginine transporter ATP-binding protein [Haemophilus influenzae
           PittEE]
 gi|229844865|ref|ZP_04465003.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           6P18H1]
 gi|229846210|ref|ZP_04466322.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           7P49H1]
 gi|260582109|ref|ZP_05849903.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           NT127]
 gi|145267636|gb|EDK07634.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittAA]
 gi|148716371|gb|ABQ98581.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           PittEE]
 gi|229811214|gb|EEP46931.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           7P49H1]
 gi|229812246|gb|EEP47937.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           6P18H1]
 gi|260094741|gb|EEW78635.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           NT127]
          Length = 239

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 82/259 (31%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F      G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAVSAQ--------------ELTFAMEPSYPPFETTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QATCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 ++ R D   GD + L  +      P    +   + +K      L  A+ + + +
Sbjct: 154 NAILDLKSGRIDIILGDTAVLSDMIS--KEPEIQFVGEKVTNKKYFGNGLGIAMHKSNKD 211

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 212 LAAQLNKGLAAIKANGEYQ 230


>gi|309973356|gb|ADO96557.1| Arginine ABC transporter, periplasmic-binding protein ArtI
           [Haemophilus influenzae R2846]
          Length = 239

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +   +                L   +      F      G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAAGAQ--------------ELTFAMEPSYPPFETTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++           L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QATCKFKSETFDALIPNLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 PYYDSTASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYTPKSYSTLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + L  +       +     +       + +A A+ + + +  
Sbjct: 154 NAILDLKSGRIDIIFGDTAVLSDMISKEPEIQFIGEKVTNKKYFGNGIAIAMHKSNKDLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 AQLNKGLAAIKANGEYQ 230


>gi|307710659|ref|ZP_07647092.1| L-cystine-binding protein tcyA [Streptococcus mitis SK564]
 gi|307618602|gb|EFN97745.1| L-cystine-binding protein tcyA [Streptococcus mitis SK564]
          Length = 266

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L LI  F  +   N S   +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLLIFPFLVACG-NQSTPKETSSQKTIVVATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|146308275|ref|YP_001188740.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
 gi|145576476|gb|ABP86008.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 297

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 94/266 (35%), Gaps = 26/266 (9%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS-- 68
            L +  +   + NA+ L  I++ G    G   G + F++  A     G+ +D CR ++  
Sbjct: 9   LLFLCAWLPVAANATTLERIREEGQFVLGFVPGNLPFSDGDAA-QASGYSIDLCRHVASL 67

Query: 69  --SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
               +      ++Y PL   +   A+   ++DIL      +L R     ++F    +  G
Sbjct: 68  VKQQLALPELPVRYRPLTPLDMLDAVTDGKVDILCAPVVESLERRR--RVSFSLPIFTAG 125

Query: 127 QGFIMHKKKGISSVSQLSG-------------------ASICVQAGTTTELTLADYFKAH 167
            G ++ +    S +  L G                       V  GT +        +  
Sbjct: 126 LGILVRQDAPASLMLPLKGEPAHSGPTWRATINRGLNRHRFAVLKGTVSVDWARTRIRQL 185

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            ++   +  +   E        + DA+  D   L   +  + + ++  +   + +   +A
Sbjct: 186 GLQSELVEVDSNREGVEQVVTRQVDAFFADSLVLLNYQAQHPQGAQLWVPERLFAVESVA 245

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEE 253
             + + D ++  +V      +  +EE
Sbjct: 246 MPLARDDEDFRLLVDTALSRLNRSEE 271


>gi|315037358|ref|YP_004030926.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112]
 gi|325955825|ref|YP_004286435.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
 gi|312275491|gb|ADQ58131.1| putative glutamine ABC transporter [Lactobacillus amylovorus GRL
           1112]
 gi|325332390|gb|ADZ06298.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
          Length = 537

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 89/300 (29%), Gaps = 32/300 (10%)

Query: 1   MYKDF--FVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M   F    ++L +++  F  FS ++ S     K  G LK G+      +          
Sbjct: 1   MKSRFRWIAALLTVLLSIFIGFSFSSNSTQAAKKDSGTLKIGMEANYPPYNWTQPTKTNG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVHIDGSNSYANGYDVQIAKIIGKRLHKK---VIVEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      ++   GA +  Q GT     +  
Sbjct: 118 PTPERRK--AINFSEPYRKSTFVVITNKASKYSNAKKLTDFKGAKLTAQQGTLHYNLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVIL 217
              A               +  +  +   D Y  +     +    N        ++    
Sbjct: 176 LKGAKRQP----AMRDFSAMRQSLASGTIDGYIAEDIEFESYHNVNPNIVAINLNKMAGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + + +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKRDQLMSQAVKEQPKAGNQTKKENWL 291


>gi|42518173|ref|NP_964103.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582457|gb|AAS08069.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 537

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 93/317 (29%), Gaps = 37/317 (11%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M      F ++L LI+     FS N++     KK   LK G+      +       ANG 
Sbjct: 1   MKSKIRWFGALLALILSLVIGFSFNSNQTEAAKKEAPLKIGMEANYPPYNWTQTTDANGA 60

Query: 56  W---------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                      G+DV   + +   +     K+            AL S +ID++      
Sbjct: 61  VPIDGSKQYANGYDVQIAKIIGKKL---HRKVVVEKTEWDGLLPALTSGKIDLIIAGMSP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R     + F           I +   K      ++   GA +  Q GT     +   
Sbjct: 118 TAERRK--AINFSEPYRKGTFVVITNKDGKFAQAKGLNDFKGAKLTAQQGTLHYDLIKQL 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
             A               +  + ++   D Y  +     + K  N       +       
Sbjct: 176 HGAKREP----AMRSFSAMRQSLQSGTIDGYVAEDIEYQSYKTVNPNIVAVNLNKMQGFH 231

Query: 224 SPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP------D 272
            P      +  + +G+TE  + V+     +   +   +  + + +  +   +        
Sbjct: 232 IPYEDSITSIGVKKGNTELLDQVNNILKGISNKKRDQLMAQAVKEQPQAGGSKKENWFMS 291

Query: 273 VQRFLGIDKSSNIGEAL 289
           + R  G      +G  L
Sbjct: 292 IMRRYGSMILGGVGMTL 308


>gi|296110804|ref|YP_003621185.1| amino acid ABC transporter, substrate binding protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295832335|gb|ADG40216.1| amino acid ABC transporter, substrate binding protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 271

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 82/263 (31%), Gaps = 32/263 (12%)

Query: 1   MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K++   ++  +I+               + N+     +KK G L  G+      F+  
Sbjct: 1   MKKNWIYGLIVAVIVVIGGGYIVHHNRVVKADNSGKTSLVKK-GTLTIGLEGTYAPFSYR 59

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G  KGF+VD  + ++          +++P         + + + D++  +   T  R
Sbjct: 60  Q-DGKLKGFEVDLAKKVAEKSGLKA---KFVPTAWDGLIAGIGANKFDVVFNDVAITPER 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +  +  ++ K    +     + G ++    GT  E        A   
Sbjct: 116 QA--KYLFATPYLYSREVLVVKKDNNELKGYKDVKGHTLAEGVGTNNETV------AKKF 167

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP------DIISK 223
               I            +  R +    D  A        D P +  I+            
Sbjct: 168 GAKTIASSEFTNTVNLIKQGRAEGAFNDEGAFATYI--KDNPEDAKIVKAIKVPTSASPA 225

Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246
           + +AP + Q +      V+    
Sbjct: 226 AKIAPLLNQKNKGLQKQVNQAIK 248


>gi|6685721|sp|P72298|OCCT_RHIME RecName: Full=Octopine-binding periplasmic protein; Flags:
           Precursor
 gi|1519475|gb|AAB07521.1| OccT [Sinorhizobium meliloti]
          Length = 294

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 90/298 (30%), Gaps = 44/298 (14%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             SI+C  +      +          +   +          +     NG   GF++D  +
Sbjct: 3   LKSIMCAALFVVAGQAAA--------QEKSITIATEGAYAPWNFSGPNGKLDGFEIDLAK 54

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L   +     K Q +  N      +L +K+ D++      T  R+    ++F       
Sbjct: 55  VLCERM---KVKCQIVAQNWDGIIPSLVAKKYDVIMAAMSVTPKRQEV--ISFSTPYGAH 109

Query: 126 GQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTTELTLA 161
             GF + K   ++ +                          L G ++ VQ  TT    L 
Sbjct: 110 MNGFAVMKDSKLADMPGSGEVYSLNTQADAAKKRIDDVNAFLDGTTVGVQGSTTGSQFLE 169

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           +YFK          ++ VEE +    + R DA     + L A     D     V+ P   
Sbjct: 170 NYFK---NSVDIKEYKTVEEFNIDLMSGRVDAVFASATVLTAAFEQPDMKDAKVVGPLFS 226

Query: 222 SKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 +A  + + D            A+   +E    + + +   K   +    + L
Sbjct: 227 GDELGKVAVGLRKDDAALKAEFR--LGAVGLRKEDAALKADFDSSIKAVADEGTIKTL 282


>gi|313472477|ref|ZP_07812969.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lactobacillus jensenii 1153]
 gi|313449163|gb|EEQ68904.2| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Lactobacillus jensenii 1153]
          Length = 259

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 85/247 (34%), Gaps = 16/247 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFC 64
              +L L+ +   + S   +   D   +  L  G+N  G   F+ +  NG   GF+V+  
Sbjct: 1   MTVLLMLLSVGVVACSNQKNAKSDTLTKNTLIVGLNPSGYGPFSHL-ENGKLTGFEVEMA 59

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +AL+  +      I+++P         L +K+ D++  +   T  R+     AF     +
Sbjct: 60  KALTKKMGYK---IKFVPTKWDSLIAGLGAKKFDVVINDIAVTPERKK--AYAFSTPYLY 114

Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                IM      I  ++ + G  +    GT     +  +   +      I         
Sbjct: 115 SRSVLIMRSDNSKIKKITDIRGEKVAAATGTANADLVRKFGGEN------ISSPDFSTAM 168

Query: 184 AAYRAHR-CDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIV 241
              R  R   A     S LY  K       +++   D      P+A  + + ++     +
Sbjct: 169 ELVRQKRVTSAMNSKESFLYFKKTQKVSDLKYLQASDTDIPTQPVAIMLNKDNSNLQTKI 228

Query: 242 SWTHYAM 248
           +    ++
Sbjct: 229 NNALKSL 235


>gi|297618709|ref|YP_003706814.1| extracellular solute-binding protein family 3 [Methanococcus voltae
           A3]
 gi|297377686|gb|ADI35841.1| extracellular solute-binding protein family 3 [Methanococcus voltae
           A3]
          Length = 268

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
              +++  G LK G+      F       G+++GFD+DF  A+   +      ++ +   
Sbjct: 39  SWKNVQDSGVLKVGLCAAYPPFESRNEKTGEFEGFDIDFANAIGEELGVK---VEIIDAE 95

Query: 85  AKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                  L     D L         RE          P         +  +   I+S++ 
Sbjct: 96  WPALLGGLSKGDYDTLITCMS---ERETSAENVEMSEPYYALTDVVVVNKETDSINSLND 152

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           LSG  +  Q GT +     D  +        + +    E        R DA     +   
Sbjct: 153 LSGKVVGAQLGTGS----QDTAEGIEGVKEVVTYNYNPEAFIDLENGRVDAVIVGQAYAL 208

Query: 203 ALKLTNDR 210
                 + 
Sbjct: 209 TQMKEYEN 216


>gi|77408170|ref|ZP_00784915.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae COH1]
 gi|77173185|gb|EAO76309.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae COH1]
 gi|319744242|gb|EFV96607.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus agalactiae ATCC 13813]
          Length = 270

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 61/174 (35%), Gaps = 12/174 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +SI  +      + S  AS    +     LK   ++    F     +G +KG+D
Sbjct: 1   MFKKIILSIATIAATASLAVSVQAS--EKV----ELKVATDSDTAPFTYQ-KDGKFKGYD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+         K+ +  +        + + + D+ + +  +   R       F  
Sbjct: 54  VDVVKAVFK---GSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAE--KYLFSD 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                    +  K     S+S LSG S  V +G      L ++ K H  K    
Sbjct: 109 PISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIK 162


>gi|22536474|ref|NP_687325.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010354|ref|NP_734749.1| hypothetical protein gbs0280 [Streptococcus agalactiae NEM316]
 gi|76787879|ref|YP_329014.1| polar amino acid ABC transporter amino acid-binding protein
           [Streptococcus agalactiae A909]
 gi|76798687|ref|ZP_00780910.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 18RS21]
 gi|77410638|ref|ZP_00786998.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae CJB111]
 gi|22533304|gb|AAM99197.1|AE014204_15 ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 2603V/R]
 gi|23094706|emb|CAD45925.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562936|gb|ABA45520.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus agalactiae A909]
 gi|76585968|gb|EAO62503.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 18RS21]
 gi|77163353|gb|EAO74304.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae CJB111]
          Length = 270

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 61/174 (35%), Gaps = 12/174 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +SI  +      + S  AS    +     LK   ++    F     +G +KG+D
Sbjct: 1   MFKKIILSIATIAATASLAVSVQAS--EKV----ELKVATDSDTAPFTYQ-KDGKFKGYD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+         K+ +  +        + + + D+ + +  +   R       F  
Sbjct: 54  VDVVKAVFK---GSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAE--KYLFSD 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                    +  K     S+S LSG S  V +G      L ++ K H  K    
Sbjct: 109 PISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIK 162


>gi|77409685|ref|ZP_00786352.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae COH1]
 gi|77171706|gb|EAO74908.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae COH1]
          Length = 529

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 87/290 (30%), Gaps = 31/290 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L+ +FF      ++          +    +T    F    ++  +KG D
Sbjct: 1   MKHKLKAFTLALLSIFFVFGGKVSAE--------TVNIVSDTAYAPFEFKDSDQTYKGID 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   +            A+QS Q D L   T  T  R+      F  
Sbjct: 53  VDIVNEVAKRAGWN---VNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKV--FNFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y             +++  QL G  + V+ GT  +  L +        Y    F+  +
Sbjct: 108 TYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEEN--KSKYGYKVKTFDTSD 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            ++ +  +    A   D   +            + I  +  +    A A+ +G      I
Sbjct: 166 LMNNSLDSGSIYAAMDDQPVVQFAINQGK---AYAINMEGEAVGSFAFAVKKGSGHDNLI 222

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
                                   S  T N  + ++LG D +   G+A G
Sbjct: 223 -------------KEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKATG 259



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 77/240 (32%), Gaps = 11/240 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K   ++    F      G + GFD++    ++        K+            A+QS Q
Sbjct: 273 KIVSDSSFAPFEYQNGKGKYTGFDMELITKIAKQ---QGFKLDISNPGFDAALNAVQSGQ 329

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G ++  + GT +
Sbjct: 330 ADGVIAGATITEARQKI--FDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTAS 387

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+D+  A    YH   F+    +  +  +   DA   D      L    ++  +   
Sbjct: 388 YTWLSDH--ADKYXYHVKAFDEASTMYDSMNSGSIDALMDDE---AVLAYAINQGRKFET 442

Query: 217 LPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                    +  A+ +G + E   + +    ++  + E     K     +  ++N    +
Sbjct: 443 PIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAK 502


>gi|10955055|ref|NP_059711.1| hypothetical protein pTi_039 [Agrobacterium tumefaciens]
 gi|61229375|sp|P0A4F8|OCCT_AGRTU RecName: Full=Octopine-binding periplasmic protein; Flags:
           Precursor
 gi|61229376|sp|P0A4F9|OCCT_AGRT4 RecName: Full=Octopine-binding periplasmic protein; Flags:
           Precursor
 gi|154772|gb|AAA98382.1| occJ [Agrobacterium tumefaciens]
 gi|496544|emb|CAA82986.1| OccT [Agrobacterium tumefaciens]
 gi|81176502|gb|ABB59524.1| OccJ [Agrobacterium tumefaciens]
          Length = 276

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 82/274 (29%), Gaps = 45/274 (16%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +ILC  +L     +          +   +      G   +      G   GF+
Sbjct: 1   MK---LKTILCAALLLVAGQAAA--------QEKSITIATEGGYAPWNFSGPGGKLDGFE 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +    +K Q +  N      +L  K+ D +      T  R+  +G  F  
Sbjct: 50  IDLANALCEKM---KAKCQIVAQNWDGIMPSLTGKKYDAIMAAMSVTPKRQEVIG--FSI 104

Query: 121 ITYFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTT 156
                  GF +     ++ +                          L+G ++ VQ  TT 
Sbjct: 105 PYAAGINGFAVMGDSKLAEMPGLGETYSLDSQADAAKKAIADISSFLNGTTVGVQGSTTA 164

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L  YFK          ++ VEE +    + R DA   + + L A     +     ++
Sbjct: 165 STFLDKYFK---GSVDIKEYKSVEEHNLDLTSGRLDAVLANATVLAAAIEKPEMKGAKLV 221

Query: 217 LPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAM 248
            P         +A  + + DT           A 
Sbjct: 222 GPLFSGGEFGVVAVGLRKEDTALKADFDAAIKAA 255


>gi|28211918|ref|NP_782862.1| sensory transduction protein kinase [Clostridium tetani E88]
 gi|28204361|gb|AAO36799.1| sensory transduction protein kinase [Clostridium tetani E88]
          Length = 673

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 12/212 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K   +     F  +  N ++ GFDVD  RALS        ++Q+ P+N ++    L++
Sbjct: 45  VIKVAGDDNFPPFEYMGDNKNYTGFDVDIVRALS---LTCGFEVQFYPMNWEKACEKLKN 101

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAG 153
            +ID L +       RE      F    + + Q  FI+++  G+     L G  + +Q G
Sbjct: 102 GEID-LIQGMKKIQEREK--EYDFSKPYFQNNQSIFILNENLGLYKYEDLKGKKVALQKG 158

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 L           + +  +  E+        + DAY G+           +    
Sbjct: 159 DVAINNLKAL-----GDVNIVFTKDQEDALKRLLNKKVDAYIGNTLTGVNYINKLEIRDN 213

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             I+   I+ +  + A+ +G+ E  +I++   
Sbjct: 214 IKIVDVPINSTEYSIAVKKGNVELLDIINRGL 245


>gi|320355394|ref|YP_004196733.1| PAAT family amino acid ABC transporter substrate-binding protein
           [Desulfobulbus propionicus DSM 2032]
 gi|320123896|gb|ADW19442.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 244

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 11/220 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     +    +        V       G+ ++F  A        P    +        F
Sbjct: 19  VAAETTITFATDATWPPMEFVNDQKQVVGYAIEFMTAAGKEAGFTP---VFKNTAWDGIF 75

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L +K+ D +  +   T  R+    + F    +   Q  I+ K     S++ L G  + 
Sbjct: 76  AGLAAKKYDAIVSSVSITEERKK--AMDFSEPYFTVRQALIVGKASTAKSLADLKGQKVG 133

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL-TN 208
            Q GTT    +               ++ V          R  A   D        +   
Sbjct: 134 GQIGTTGYFAIKAAA-----GVEAKSYDEVGLAMEDLNVGRIAAVVCDDPVAANYAMDKY 188

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +   + +         A+ +G+ E   +++    A+
Sbjct: 189 KDTLKIAAIIETGEAEHYGVAVNKGNAETLALINKGIAAV 228


>gi|300855935|ref|YP_003780919.1| putative ABC transporter periplasmic solute-binding component
           [Clostridium ljungdahlii DSM 13528]
 gi|300436050|gb|ADK15817.1| predicted ABC transport system, periplasmic solute-binding
           component [Clostridium ljungdahlii DSM 13528]
          Length = 279

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 90/257 (35%), Gaps = 15/257 (5%)

Query: 1   MY--KDFFVSILCLIILF--FTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANG 54
           M   K  F   +C  ++F      ST        + +G   +     +  V  + V  NG
Sbjct: 1   MKSIKKIFSLAVCACMIFGMTACGSTKNDSQKKEETKGPTKIIVASGSSSVPNSYV-ENG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             KG +VD   A+S+       K+Q++  +    F  L S + D +         R+   
Sbjct: 60  VHKGHEVDIWNAISAKTG---IKVQFVTGDFDTLFGYLDSGKADTVGNTITINAKRKA-- 114

Query: 115 GLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +  +  ++H     I  +  +SG +    +G+          K   +K + 
Sbjct: 115 KYDFSEPYAYIPEKLVVHSDKTNIKKLKDISGMTCGFSSGSNGGNLFKQIAKEQGIKINL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + ++  + +  A+R  + DA     SA  A     +      ++ + ++    A   ++G
Sbjct: 175 VTYDSSDLLFEAFRQGKVDAMI--YSAGEAAYKIKNGLLNARMVEENVTVGAKAYPFVKG 232

Query: 234 DTEWYNIVSWTHYAMVT 250
           +     +      A+  
Sbjct: 233 NANSEKLNKVVTKAIQE 249


>gi|167841847|ref|ZP_02468531.1| extracellular solute-binding protein, family 3 [Burkholderia
           thailandensis MSMB43]
          Length = 274

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 81/228 (35%), Gaps = 13/228 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +   +A  L +I +   +  GIN  L       A     GFDV   R L+ A+     K
Sbjct: 22  GASPAHARSLQEILESKKIVFGINPNLPPLGLYDAKNTIDGFDVSVARKLADAL---SVK 78

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++ +P+ + +R   L + +ID +          +    + F      +  G +  +    
Sbjct: 79  LEIVPVGSADRVPFLMADKIDAVMGGMTRNP--DRLKVIDFTDPVNTEVLGVLTTQATTF 136

Query: 138 SSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              +QL+  S+ +     TT    + +           ++ +   +   A    R DA  
Sbjct: 137 KDYTQLNDPSVRLVQVRGTTPVKLIQEQLPKA----QLLLLDNYPDAVRAIAQGRADALI 192

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             +  +  L  T + P++  ++   I        I +G+T     ++ 
Sbjct: 193 DVLDFM--LSYTKNYPTKWRVVDSPIEVDYDCIGIRKGNTALTERLNK 238


>gi|219852267|ref|YP_002466699.1| extracellular solute-binding protein family 3 [Methanosphaerula
           palustris E1-9c]
 gi|219546526|gb|ACL16976.1| extracellular solute-binding protein family 3 [Methanosphaerula
           palustris E1-9c]
          Length = 294

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 82/274 (29%), Gaps = 38/274 (13%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFL-----------------------KCGIN 41
             V++L       T+ +TN S          +                         G++
Sbjct: 19  ILVAVLASAGCTGTTPATNNSTAVKTNATTVVANVTSTTDVTNVTNTTGTGNVTYIVGVD 78

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                +     NG   GFDVD  + ++     +   ++  P+       AL  K+ID++ 
Sbjct: 79  ADNKPYTFSD-NGTIVGFDVDSIQWIAQQQGFN---VKIQPMAWDGIIPALLQKKIDMVY 134

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV--QAGTTTELT 159
                T  R     + F        Q  +      + ++       + V  Q  ++    
Sbjct: 135 SGMTKTPERAA--QVNFSKTYLIVNQSVVGRNDSTL-TMDDFKKGKVIVGTQRSSSANSW 191

Query: 160 LADYFKAHNM--KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           + D    +N     +  +++ V    A     R D    D   +  L            +
Sbjct: 192 IDDNLVKNNTLSSDNLKLYDSVSLALADLANKRVDVVMFDQPVMNTLIKDMP----LKQI 247

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             + +      AI + DTE  N ++     ++ +
Sbjct: 248 GTVDTHEEYGVAIRKEDTELQNKINTGLDQLMNS 281


>gi|299537136|ref|ZP_07050439.1| histidine-binding protein precursor [Lysinibacillus fusiformis ZC1]
 gi|298727377|gb|EFI67949.1| histidine-binding protein precursor [Lysinibacillus fusiformis ZC1]
          Length = 285

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 39/296 (13%)

Query: 1   MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M + + + ++ ++     +           S++A      +  G  + G+  G   F   
Sbjct: 1   MKRKWLLVMISIMTAIVLAACGTSDKKEGGSSDAGT-DKEEGGGEFRIGMEAGYPPFNWT 59

Query: 51  ---KANGDWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
               ANG  K         G+DV   + ++  +  +   +  + +       ALQS +ID
Sbjct: 60  QQDDANGAVKIADNAEYAGGYDVQMAKKIAEGLGKE---LVIVKMEWDGLVPALQSNKID 116

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTT 155
            +      T  R+ +  + F    Y      ++ K        S+   SGA I  Q  T+
Sbjct: 117 AIIAGMSPTEERKKT--IDFTENYYTSDFVMVIKKGSKYEGAKSIQDFSGAKITSQLNTS 174

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +                E    +  A  A + D Y  +     +    ND+ +   
Sbjct: 175 NYTVIDQI----KGVEKQTAMESFPAMRVALEAGKIDGYVAERPEGISASAANDKFTYVA 230

Query: 216 I---LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                   +S + +A  + + D      ++     +   +   I ++ I+Q     
Sbjct: 231 FEEGFDTDLSNTSIAVGLRK-DDANREKINEILKGISEDDRQAIMEEAISQQPAAQ 285


>gi|270293390|ref|ZP_06199599.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M143]
 gi|270278239|gb|EFA24087.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M143]
          Length = 520

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 82/284 (28%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +         A          +L+ G+      F             
Sbjct: 1   MKKLCLSILASLALTLGLVSQVQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L+  S      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLNDFSGAKIT-SQQGVYLYDLISQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +     +     +      
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAESANSKFKMVQLDKGFETGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+    I      A +           ++++ K+  
Sbjct: 227 IAIGLRKDDSRISQI-----NASIETISKDEQVALMDRMIKEQP 265


>gi|126654039|ref|ZP_01725870.1| hypothetical protein BB14905_15640 [Bacillus sp. B14905]
 gi|126589473|gb|EAZ83618.1| hypothetical protein BB14905_15640 [Bacillus sp. B14905]
          Length = 285

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 37/295 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAEV- 50
           M + + + ++ ++     +    +               +  G  + G+  G   F    
Sbjct: 1   MKRKWLLVMISIMTAIVLAACGTSDKKEGSSGEAGADKEEGGGEFRIGMEAGYPPFNWTQ 60

Query: 51  --KANGDWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
              ANG  K         G+DV   + ++  +  +   +  + +       ALQS +ID 
Sbjct: 61  QNDANGAVKIADNAEYAGGYDVQMAKKIAEGLGKE---LVIVKMEWDGLVPALQSNKIDA 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTT 156
           +      T  R+ +  + F    Y      ++ K      + S+   SGA I  Q  T+ 
Sbjct: 118 IIAGMSPTEERKKT--IDFTENYYTSDFVMVIKKGSKYEGVKSIQDFSGAKITSQLNTSN 175

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              +      +         E    +  A  A + D Y  +     +    ND+ +    
Sbjct: 176 YNVIDQIKDVNKQT----AMESFPAMRVALEAGKIDGYVAERPEGISAAAANDKFTYVAF 231

Query: 217 ---LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                  +S + +A  + + +    + ++     +   +   I ++ I+Q     
Sbjct: 232 EEGFDTDLSNTSIAVGLRK-EDANLDKINEILKGISEDDRQAIMEEAISQQPAAQ 285


>gi|257063133|ref|YP_003142805.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Slackia heliotrinireducens DSM
           20476]
 gi|256790786|gb|ACV21456.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Slackia heliotrinireducens DSM
           20476]
          Length = 364

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 66/224 (29%), Gaps = 23/224 (10%)

Query: 37  KCGINTGLVGFAEVKANGD----------WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             G +     F      G+          + GFD+D    + +    +   ++  P++  
Sbjct: 120 IVGFDGDYPPFGYQADPGEDGYLADNGQTYTGFDLDLAAEVCNR---NGWTLKVQPIDWD 176

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            +   L+S +I  +     +          A+     ++ Q  ++    GI S+S L+G 
Sbjct: 177 SKDAMLESGEITCVWNGFTY---DNYQTQYAWSDPYMYNLQVVVVRADSGIYSLSDLAGK 233

Query: 147 SICVQAGTTTELTLA-----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           ++  Q  +     L          A              E          DA   D    
Sbjct: 234 NVVTQDYSFAFDLLEYDDSYTAIAATFNGGGIGTVGSYTEAFDQLEQGAVDAVVCDSGT- 292

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            AL+   D P   +   + +     A A   G       VS T 
Sbjct: 293 -ALQAMADHPDAFMQQDETLYVEHYAIAFAPGQEGMAQTVSDTL 335


>gi|257070104|ref|YP_003156359.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
 gi|256560922|gb|ACU86769.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
          Length = 324

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD--PSKIQYLPLNA 85
            IK +  L  G       F+     G    GFD    + L+  I  +    K+ Y+    
Sbjct: 75  AIKDKDQLIRGGTVANQVFSLASTTGGQPTGFDAGITQLLAKYILGEGGEEKVDYVDTTV 134

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQL 143
           + R   +Q+  +D +      T  R     + F    Y  G    +  +    IS    L
Sbjct: 135 ETRETMVQNGTVDCVIATYSITPER--LEVIDFAGPYYLSGTAIQVRAEDKDSISGPEDL 192

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           SG ++  QA +T    + D                 E   AA +  R DAY  D   L  
Sbjct: 193 SGLNLVTQANSTGIQAIEDNVPDPG---DVQTLPDNESCVAALKQGRADAYVLDQGVLLG 249

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               +D   E V++ +     P    + Q      + V+     ++ + 
Sbjct: 250 NSAADD---EVVVVGEPFVDDPYGIGLSQDSEGAVDFVNTFLQEIIDSG 295


>gi|225858454|ref|YP_002739964.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae 70585]
 gi|225721335|gb|ACO17189.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae 70585]
          Length = 266

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKESSSQKTIVVATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|163748034|ref|ZP_02155356.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Oceanibulbus indolifex
           HEL-45]
 gi|161378694|gb|EDQ03141.1| putative amino acid uptake ABC transporter periplasmic
           solute-binding protein precursor [Oceanibulbus indolifex
           HEL-45]
          Length = 212

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 60/180 (33%), Gaps = 16/180 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 ++  L +    S    A           L+ G       F  ++A+G   GFDV
Sbjct: 4   KLKLTTALSTLAVAASLSTGAFAET---------LRLGTEGAYPPFNYIEADGKIAGFDV 54

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + L   I     + + +  +       L + + D +  +   T  R+    + F   
Sbjct: 55  EIGQELCKRIG---EECEVVAQDWDGIIPGLLANKYDFIIASMFITEERKK--QVDFTDP 109

Query: 122 TYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y      ++ K   I   +   L+   I  Q+GTT    +   +   +++ +P    + 
Sbjct: 110 YYLAAMTNVVPKGSDITEFTNEALADKVIGAQSGTTHADYIEATYPDADVRLYPTQMSQP 169


>gi|330500966|ref|YP_004377835.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas mendocina NK-01]
 gi|328915252|gb|AEB56083.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas mendocina NK-01]
          Length = 281

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 78/271 (28%), Gaps = 17/271 (6%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
             L  +++   +  T AS L  +K    ++ G       FA    +G   G   +  + +
Sbjct: 12  LALASVLIAGFATGTQASTLDKVKDSSSVRIGYANET-PFAYTALDGSVTGESPEIVKKI 70

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              +  +   I  +          L++ + D+++     T  R     + F    Y    
Sbjct: 71  FERMGVEK--INPVLTEWGSLIPGLRASRFDLIAAGMYITPER--CKQVLFTDPHYQLPD 126

Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             +        + S   ++  S    A  +  + L     A       +          A
Sbjct: 127 TLLTKAGNPKNLHSYEDIA-KSGAKLAIMSGTVNLGYARNAGISDDQILQVPDTTAQLQA 185

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            RA R DA  G    +  L        E       D       A A    D E  + V+ 
Sbjct: 186 VRAGRADAAVGTQLTMKGLADKGGDSVEAISEFKDDPAHTGYGALAFRPEDKELRDAVNA 245

Query: 244 THYAMVTAEE-------LGITQKNINQVSKD 267
                + +E+        G  Q NI   +  
Sbjct: 246 QLKEWIGSEDHLATVKPFGFDQSNITDKTAA 276


>gi|320547420|ref|ZP_08041707.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
 gi|320447897|gb|EFW88653.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
          Length = 279

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 79/250 (31%), Gaps = 9/250 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   ++ L +      +  ++++       +  +          F+    +G   G+D+
Sbjct: 5   KKLLGITGLAIASTALLAACSSSNSAKSSSGKEEVTFATVGTTAPFSYED-DGKLTGYDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A+      D  K+ +        F  L S +  +   N  +T  R       +   
Sbjct: 64  EVAKAVFKD--SDKYKVTFKKTEWSSIFTGLDSGKYQLGGNNISYTKERSA--KYLYSYP 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE- 180
                   ++ K   I+S   ++G S  V  GTTT   L  Y   ++ K   + +     
Sbjct: 120 IGSTPSVLVVSKDSDITSYDDIAGHSTQVVQGTTTAAQLEKYNTENSSKQVELNYTNENI 179

Query: 181 -EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWY 238
            ++       + D    D   +    + N        +     + P +   + Q   +  
Sbjct: 180 TQVLTNLNEGKFDFKIFDAPTVNT-IIKNQNLDNLKTIELKSDEQPFIYFILGQDQKDLQ 238

Query: 239 NIVSWTHYAM 248
             V+    A+
Sbjct: 239 TYVNKRLKAL 248


>gi|21910155|ref|NP_664423.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           MGAS315]
 gi|21904348|gb|AAM79226.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           MGAS315]
          Length = 287

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 25  SQKSSWETIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +        +  
Sbjct: 82  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMAKK 140

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 141 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 197

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 198 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 257

Query: 257 TQKNI 261
             +  
Sbjct: 258 ISETY 262


>gi|186681194|ref|YP_001864390.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
 gi|186463646|gb|ACC79447.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme
           PCC 73102]
          Length = 270

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 67/214 (31%), Gaps = 13/214 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLA 91
           L+   +   V F   KA GD +GFD+D   AL+             +Q+  L        
Sbjct: 38  LRVATDPTFVPFEIQKARGDLEGFDIDLMNALAKPAVGIAKVAGFAVQFESLPFDGTIST 97

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150
           LQ+K++D        T  R  ++   F    +  G    +    + I   + L G  I V
Sbjct: 98  LQAKRVDAAISGISITAERLKTIA--FSRPYFKAGLAIAVREDNQNIQDFNSLKGKKIAV 155

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q G+T        F           F    E          DA   D  A     + N +
Sbjct: 156 QIGSTGAD-----FAKTIPNAKISTFNSGPEFFQDLLNGNVDAVVSDAFATL-YAIKNGK 209

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                ++ D+ ++     A  +       I    
Sbjct: 210 LKGIRVVADLFTEEYYGIATPKDSPHLDAINKGI 243


>gi|161619871|ref|YP_001593758.1| amino-acid ABC transporter-binding protein patH precurso [Brucella
           canis ATCC 23365]
 gi|254704962|ref|ZP_05166790.1| amino-acid ABC transporter-binding protein patH precurso [Brucella
           suis bv. 3 str. 686]
 gi|260567565|ref|ZP_05838035.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           suis bv. 4 str. 40]
 gi|261755662|ref|ZP_05999371.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686]
 gi|161336682|gb|ABX62987.1| amino-acid ABC transporter-binding protein patH precurso [Brucella
           canis ATCC 23365]
 gi|260157083|gb|EEW92163.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           suis bv. 4 str. 40]
 gi|261745415|gb|EEY33341.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686]
          Length = 281

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 70/254 (27%), Gaps = 16/254 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  D    ++        +++ L L  +     L + + D ++ +      R       
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVATSVGINPERAKRYAYT 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-----AHNMKYH 172
                              I +V  L G  +  Q  +  +       K     +      
Sbjct: 117 LPIA-DSTAYAIKKAGNDEIKTVEDLKGKVVSTQLASAVDPVAKHLDKRLEASSGEGFAD 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231
             +F        A      DA    +  L    L N RP    ++          A  + 
Sbjct: 176 LKLFPTFNNSFLAVANGTSDAALAGLPVL--RNLMNQRPGIFELVGKASDIPSYNAWVVR 233

Query: 232 QGDTEWYNIVSWTH 245
             D +  + ++   
Sbjct: 234 PEDQDLRDALNKAI 247


>gi|255324616|ref|ZP_05365733.1| ABC-type amino acid transport system, secreted component
           [Corynebacterium tuberculostearicum SK141]
 gi|255298522|gb|EET77822.1| ABC-type amino acid transport system, secreted component
           [Corynebacterium tuberculostearicum SK141]
          Length = 295

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 9/223 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G N     F    ++G  +G ++D   A++  +  D   ++    +      A+Q
Sbjct: 56  GVLTAGTNPPYAPFQLKDSHGALQGVELDLAHAVAGVLGLDFQPVE---QDFSMILPAVQ 112

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S QID+ +        R       F    Y   Q                 G ++ VQ  
Sbjct: 113 SGQIDMGASGFTDNPER--RNEFDFVDHLYAGIQWAERVDGPKKVDPDNPCGLTVAVQRT 170

Query: 154 TTTEL-TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           T +E   +     A N     + ++  +    A    R DA + D          ++   
Sbjct: 171 TVSETDDVRPKKDACNGDLTVLSYDTGDNAALAVLMGRADALSADSPVTAWAVNRSEGKM 230

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + D+   SP   A+ + D++     +     ++   E  
Sbjct: 231 --RQVGDMFQASPYGFAVPK-DSDLGKASAAALQHLIETGEYA 270


>gi|218246307|ref|YP_002371678.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           8801]
 gi|218166785|gb|ACK65522.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8801]
          Length = 302

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 99/286 (34%), Gaps = 23/286 (8%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL----SSAIFDDP 75
            S + +++  + + G L  G    L+ ++      +  G+ +     +       +    
Sbjct: 21  TSLSETVIEKVARTGVLTAGSRLNLIPYSYFNDKEELDGYSLAVLNLIREDLEKQLGKPI 80

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
                   +  ER   L S  IDI      +T  R+    + F       G   ++ K  
Sbjct: 81  KLEIIEAQDISERIPKLMSGDIDISCDTV-FTWERDKF--VDFSLSYGVSGVRLLVPKNS 137

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + +   L G  + +   T     + D  K    K   I      E   A +A + DA  
Sbjct: 138 TLGTPESLEGKRVAIIPHT----VIGDTIKLVQPKATLIPVNNFTEGIEALKAGKVDAIA 193

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           GD   L   +      +  ++  D  ++  +A  + +G++ + N+V+++   ++      
Sbjct: 194 GDSIILDGERQRLKSDNYQLVPEDPYARYGIACMVPEGNSTFLNLVNYSIAKLMQG---- 249

Query: 256 ITQKNINQVSKDTTNPD-VQRFLGIDKSSNIGEALGLTKDWTYRII 300
                   +  D    + + R++G +    I +   +   + Y II
Sbjct: 250 -------YLIGDPKYQEIINRWIGPEGVVTIVKPEAIKDFFEYTII 288


>gi|94988393|ref|YP_596494.1| cystine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|94990273|ref|YP_598373.1| cystine-binding protein [Streptococcus pyogenes MGAS10270]
 gi|94992275|ref|YP_600374.1| cystine-binding protein [Streptococcus pyogenes MGAS2096]
 gi|94541901|gb|ABF31950.1| cystine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|94543781|gb|ABF33829.1| Cystine-binding protein [Streptococcus pyogenes MGAS10270]
 gi|94545783|gb|ABF35830.1| Cystine-binding protein [Streptococcus pyogenes MGAS2096]
          Length = 299

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 37  SQKSSWDTIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 93

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +        +  
Sbjct: 94  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMAKK 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 153 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 209

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 210 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 269

Query: 257 TQKNI 261
             +  
Sbjct: 270 ISETY 274


>gi|56808254|ref|ZP_00366024.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Streptococcus pyogenes M49
           591]
 gi|306827503|ref|ZP_07460786.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pyogenes ATCC 10782]
 gi|304430301|gb|EFM33327.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pyogenes ATCC 10782]
          Length = 299

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 37  SQKSSWDTIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 93

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +           
Sbjct: 94  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMVKK 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 153 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 209

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 210 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 269

Query: 257 TQKNI 261
             +  
Sbjct: 270 ISETY 274


>gi|330468493|ref|YP_004406236.1| amino acid ABC transporter/signal transduction systems periplasmic
           component-like protein [Verrucosispora maris AB-18-032]
 gi|328811464|gb|AEB45636.1| amino acid ABC transporter/signal transduction systems periplasmic
           component-like protein [Verrucosispora maris AB-18-032]
          Length = 351

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 26/230 (11%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE------R 88
            L  G+     G +++  NG + GFD++    ++  +  D  ++++LP+ +++      R
Sbjct: 46  ELLIGVKDDQPGVSQLLENGAFVGFDIEIAYMIAEDLGFDAPRVRFLPIESEDRARRQAR 105

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGA 146
               +   +D++  +   T  R    G+ F        Q  +      +  ++ + L+G 
Sbjct: 106 TPDGRFVTVDLVIASYSITEDR-RRQGVVFSAPYLQTEQSVVTRADSKLAPTTFADLAGR 164

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +C  A +T E  LA      + +          +          DA T D + L     
Sbjct: 165 KVCTLATSTAEQNLAAAGAQAHGRNRI------SQCIQELYDGTIDAVTTDAAVLAGFVA 218

Query: 207 -----------TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                          P              L       D    ++V+ + 
Sbjct: 219 PPLAEQAPPVKKLTNPKPLRHFDIGADGDELWGVNTGPDPAMRDLVNLSL 268


>gi|312277580|gb|ADQ62237.1| Amino acid (Glutamine) ABC transporter substrate binding
           protein/permease protein [Streptococcus thermophilus
           ND03]
          Length = 516

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 79/291 (27%), Gaps = 36/291 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG------ 54
           M K        L+++F    S  A          +L+ G+      F   + +       
Sbjct: 1   MKKIIVACFAALLLVFGGLSSAQADE--------YLRVGMEAAYAPFNWTQDDNSNGAVP 52

Query: 55  -----DWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ A    P  ++           AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQIAKKIAEAQGKKPLVVK---TAWTGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC--VQAGTTTELTLADYFKA 166
            R     + F    Y      ++      +    +                  L D    
Sbjct: 110 ER--RQEIDFSDRYYRSEPVMVVSSDGDYAKAKSVKDFKDAKITGQQGVYLYNLIDQIPN 167

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----II 221
            N +           +  A  +   D Y  +               + + L D       
Sbjct: 168 VNKQT---AMGDFGAMRQALASGIIDGYVSERPE-ARTAEKASSKYKMISLKDGGFQVSD 223

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
               LA  + +GD++    V+     +   + + +    I+    D T+  
Sbjct: 224 DDVSLAVGLRKGDSQQMEQVNKVLAGISQEKRVKLMDHIIDIQPADKTDEA 274


>gi|289525422|emb|CBJ14899.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           Sweden2]
 gi|296434975|gb|ADH17153.1| arginine binding protein [Chlamydia trachomatis E/150]
 gi|296438695|gb|ADH20848.1| arginine binding protein [Chlamydia trachomatis E/11023]
          Length = 257

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 70/251 (27%), Gaps = 24/251 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56
            K +   +  +     T           +K+RG         G N     F  V   G+ 
Sbjct: 6   KKTWIAFLAVVCSFCLTGC---------LKERGDSNSEKFIVGTNATYPPFEFVDKRGEV 56

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  R +S+ +       ++   +     L L+  +ID +      T  R   + +
Sbjct: 57  VGFDIDLAREISNKLGKTLDVREF---SFDALILNLKQHRIDAVITGMSITPSRLKEILM 113

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                        ++ K +    +      S+ VQ GT  E  L         + H   F
Sbjct: 114 I-PYYGEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQEAYLQSL-----SEVHIRSF 167

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDT 235
           +   E+       +      + S    +        +  + LP+          +     
Sbjct: 168 DSTLEVLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPEDQWVLGYGIGVASDRP 227

Query: 236 EWYNIVSWTHY 246
                +     
Sbjct: 228 ALALEIEAAVQ 238


>gi|218681462|ref|ZP_03529349.1| arginine 3rd transport system periplasmic binding protein
           [Rhizobium etli CIAT 894]
          Length = 210

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 58/173 (33%), Gaps = 16/173 (9%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G +     +  V A+G   GFD D    +   I    +   +           LQ  
Sbjct: 9   LRIGTSADYPPWESVDASGQIVGFDKDVGDEICKRI---AATCAWQNQAYDGLLPGLQVG 65

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSG----ASI 148
           + D++         R  S  + F           +     K     S S L G    A+I
Sbjct: 66  KFDLVISGVSINDER--SQKVDFSAAYADAPNSIVAAAGSKTADAKSASDLQGALAKAAI 123

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            VQ GTT E  +   F          V++R ++I     A R DA   + SA 
Sbjct: 124 GVQTGTTHEQVIRANFP----DADIRVYDRPDQIADDLIAGRIDAGLMERSAW 172


>gi|126655996|ref|ZP_01727380.1| hypothetical protein CY0110_02899 [Cyanothece sp. CCY0110]
 gi|126622276|gb|EAZ92982.1| hypothetical protein CY0110_02899 [Cyanothece sp. CCY0110]
          Length = 829

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 91/266 (34%), Gaps = 13/266 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + + + SI+  I   G LK  +      F  +   G+W G+  D    L   + ++    
Sbjct: 568 TVTVSGSIMERIATTGVLKVALRGDAPPFGYINNEGEWAGYCADVIHELGEYLQENYDIP 627

Query: 79  QYLPL-----NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
             + +     N   RF  ++ KQ  +          +     ++F    +  G  F++  
Sbjct: 628 TEIEVVQLASNLDNRFELVKEKQAYLECGPNTI---QNDLSEVSFSNFFFLTGTQFLIKP 684

Query: 134 KK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                I+    L+  +I V   TTTE  + D +   N +     + R+     A +  + 
Sbjct: 685 NNLGKINPFQSLTDVNIGVLENTTTEQFITDKYPRANRERFDASYGRIS-GIEALKKEQI 743

Query: 192 DAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           D    D   L     + +  + +  +I P  ++       +   D +W  +++    +  
Sbjct: 744 DVLASDRILLLGEMKRQSLSQENYQLIPPKPLTCEYYGLILPNDDPQWKTVINEFIASEA 803

Query: 250 TAEELGITQKNINQVSKDTTNPDVQR 275
            AE      K+         +  + R
Sbjct: 804 EAEIWNQWFKSEVSYVLSDLDDCINR 829


>gi|326203068|ref|ZP_08192934.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
 gi|325986714|gb|EGD47544.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
          Length = 275

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
                 L  +KK G +K  ++ G   F       +  GFDVD  + ++  +      I  
Sbjct: 157 PATDDSLDRVKKAGKIKFAMSGGYPPFNYFNDKEELTGFDVDIGKEVAKRLGVSYEPIT- 215

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
              +       L+SK+ D +  +      ++ S  + F    Y+ G   I+     I+S 
Sbjct: 216 --TDWSGILEGLRSKRYDGIFGSMAI--SKDRSEVVDFTDPYYYSGAQLIVRNDSKINSP 271

Query: 141 SQL 143
             L
Sbjct: 272 DDL 274


>gi|225016646|ref|ZP_03705838.1| hypothetical protein CLOSTMETH_00555 [Clostridium methylpentosum
           DSM 5476]
 gi|224950610|gb|EEG31819.1| hypothetical protein CLOSTMETH_00555 [Clostridium methylpentosum
           DSM 5476]
          Length = 278

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 15/233 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IKK G +    N     +  +  + +  G DV+  +A++ ++      ++    N +
Sbjct: 31  LDQIKKSGEIVMYTNAEFPPYEYLGDDNNVAGVDVEIGQAIADSLGVK---LKVQNTNFE 87

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
                + S + D+       T  R+    + F        Q  ++ +   I ++  L+G 
Sbjct: 88  GIVAGIASGKGDLGLSGITITAERKK--EVDFSVPYVESVQYLVIPEDSDIETMEDLAGK 145

Query: 147 SICVQAGTTTELTLADYFKA--------HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +   Q GTT  + + D                     +          +A R  A   D 
Sbjct: 146 TCGGQTGTTGFMLVDDEINGTNGAAGVLKGKDATAKAYNSAPTAMLDLQAGRIQAVVIDE 205

Query: 199 SALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                L   N   +                A A+ +G+ +    V+     +V
Sbjct: 206 LVAIELAKANPGYKAIPFKYEDGNPVAEQFAVAVKKGNEDLLEAVNKVVQDLV 258


>gi|213968323|ref|ZP_03396467.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. tomato T1]
 gi|301383455|ref|ZP_07231873.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060288|ref|ZP_07251829.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           tomato K40]
 gi|302129925|ref|ZP_07255915.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|213926961|gb|EEB60512.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. tomato T1]
          Length = 263

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 83/258 (32%), Gaps = 17/258 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    S + L +        +AS L  + + G L          ++ ++ +G+ +G D+ 
Sbjct: 5   KYSVFSAMLLGMAAMAQAQESASHLDKVLQTGQLAVCTTGDYKPYSLLREDGEHEGIDIT 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R+L+ ++    + +Q++P   K     + + + DI       +L R+     +     
Sbjct: 65  MARSLAKSLG---ATVQWVPTTWKTLLPDMVAGKCDIGMGGISVSLERQKKAFFSSTLDV 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                      +    +V Q++  S+ +           + F   ++    + F   + I
Sbjct: 122 DGKIPLVRCEDQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPNASLAFHDNKTI 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  + D    D S     +          P+ ++   +       A  + + D  W
Sbjct: 179 FQELLDKKADVMITDASEALYQQKRMPGLCAVNPTHYMQYGEK------AYLLPRDDVTW 232

Query: 238 YNIVSWTHYAMVTAEELG 255
            + V    +      E  
Sbjct: 233 KSYVDQWLHLSKATGEYQ 250


>gi|114763147|ref|ZP_01442573.1| hypothetical protein 1100011001313_R2601_05783 [Pelagibaca
           bermudensis HTCC2601]
 gi|114544200|gb|EAU47209.1| hypothetical protein R2601_05783 [Roseovarius sp. HTCC2601]
          Length = 269

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 11/215 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G N G V +     +G++ GF+V+   A++S +  +   ++ + +     F A+QS 
Sbjct: 34  LEVGANIGNVPWEFQDESGEFVGFEVELANAVASQLGRE---VEIVNIPFNGLFSAVQSG 90

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID+   +   T  R     ++F    Y   Q   +  +    S+ ++    + V  G+T
Sbjct: 91  RIDMAMSSITITDER--LQSVSFAQPYYDSDQSLTVGAEGPA-SLDEMKDKVVGVDTGST 147

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            ++   ++ + +        +E ++       A R D Y  DI AL              
Sbjct: 148 GDMWATEHAEDYGF-ADIRRYEGLQPAMLDLTAGRIDGYISDIPALQYYV---KDKPALE 203

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           ++  I +    +    + D E    V+     +  
Sbjct: 204 VVQRIETGEKYSFMFAK-DAELATEVNEILSGLKE 237


>gi|45358333|ref|NP_987890.1| ABC transporter [Methanococcus maripaludis S2]
 gi|44921091|emb|CAF30326.1| probable ABC transporter [Methanococcus maripaludis S2]
          Length = 250

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+   F+ I  + ++ F+  + + +          L  G+ T L   + +  +G++KGF+
Sbjct: 1   MFNPKFLIISTIFLIVFSGCTEDNTG----ANNQVLTVGVCTDLAPTSYI-EDGEFKGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    +S  +   P  + Y   +  E   A+   ++D        T  R   L + F  
Sbjct: 56  VELIYEISKRLDLQPEFVVY---SFSELLDAVSEGEVDCGIGYIGKTPER--QLKMDFSR 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +     ++        +  L   S+ V   +  E  L    K+  M +  I++E   
Sbjct: 111 PYGYTYSTILVRSDSNCVGIKCLENKSVGVLKDSIEEYWLESLLKS--MDFKIIIYENQN 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +I+    + + D+   D      L    D  +E  I+ D      +A AI   + E    
Sbjct: 169 DINNDLLSGKIDSEVTDHITSLYLIQDYD--TELKIVGDKFDIIYVAIAIDNTNPELKKS 226

Query: 241 VSWTH 245
           +    
Sbjct: 227 IDVAL 231


>gi|300693530|ref|YP_003749503.1| high affinity periplasmic solute-binding protein; high affinity
           transport system [Ralstonia solanacearum PSI07]
 gi|299075567|emb|CBJ34860.1| high affinity periplasmic solute-binding protein; high affinity
           transport system [Ralstonia solanacearum PSI07]
          Length = 277

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 77/224 (34%), Gaps = 10/224 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  I +R  L  G+      F  +        GF+VD  +AL   +  +   ++ + + 
Sbjct: 29  TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 85

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   LQ  ++DIL  + +    R   L     P     G   +  K   +   S L 
Sbjct: 86  PSNRIPFLQQGRVDILVASMELNPERAGLLAHVPTPYYRVGGVALV-PKDSPVRRWSDLK 144

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +C+  G++    LA    A      P  F+   E   A R   C A   D + L  L
Sbjct: 145 GKEVCLSQGSSYAKPLAAEIGA-----TPKGFKSPAESLLALRGSNCAAAVHDATLLQPL 199

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              N    ++ ++   +  +P      +G+ +    +       
Sbjct: 200 PRANPEWKDYRVVGPDLIPAPTVIWARKGERDTVAALDRIVQGW 243


>gi|251792007|ref|YP_003006727.1| arginine-binding periplasmic protein 1 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533394|gb|ACS96640.1| arginine-binding periplasmic protein 1 [Aggregatibacter aphrophilus
           NJ8700]
          Length = 239

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 80/260 (30%), Gaps = 35/260 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I     L  ++ + NA           L   +      F      G+  GFD
Sbjct: 1   MKKLLLSAI-----LLGSAMAANAQD---------LTFAMEPSYPPFESTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +           L+SK+ D      D T  R     + F  
Sbjct: 47  VDIANAICKEI---QATCHFKGEAFDALITNLRSKRFDAAISAIDITDARAK--QVLFSE 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     ++ VQ GTT +       K    +Y P  +  ++
Sbjct: 102 PYYDSTASYVALKGKANLESA----KNVGVQNGTTYQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
           +     +  R D   GD + L  +            + D ++           A+ + + 
Sbjct: 154 DAVLDLKNGRIDIIFGDTAVLADMISKEPN---IEFVGDKVNNKKYFGNGFGIAMNKSNK 210

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    ++    A+    E  
Sbjct: 211 ELAESLNKGLAAIKANGEYQ 230


>gi|227114738|ref|ZP_03828394.1| putative amino-acid ABC transporter binding protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 263

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 82/235 (34%), Gaps = 13/235 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+L L   F  +   +     +  +   LK G           + N    GFD
Sbjct: 1   MMKKVTLSVLALTTAFLVAGCDSGKSGSE--QEKVLKVGSTGQSYPSGFKQDN-KLVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +      ++++  +       L++K++D ++     T  R       F  
Sbjct: 58  VEVTEAIAKDLNYK---VEWVTADFSGLMGQLEAKKLDTVANVVAITPAR--QEKYNFAQ 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F G   + HK    I++++ L G ++    G+     L   F   +   +   +E  
Sbjct: 113 PYSFYGSQIVTHKDNADINTLADLKGKTVAGVLGSNHVNNLKKAFA--DGSVNIRTYETR 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +       + R + Y      L A     + P    ++ + +    ++    + +
Sbjct: 171 DGAMNDALSKRVEGYVNSRPILLAEINKRNLP--FKLVGEPLVIEEVSFPFHKDE 223


>gi|90410590|ref|ZP_01218606.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Photobacterium profundum 3TCK]
 gi|90328831|gb|EAS45115.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Photobacterium profundum 3TCK]
          Length = 267

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 74/250 (29%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLI-----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M       +  L+     ++        +S L  I  RG LK G               +
Sbjct: 1   MKTWSISKVCALLVAIPGLMLSQQVDAASSRLQQIIDRGVLKVGTTGDWNPMTIRDPATN 60

Query: 56  -WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            +KG+D+D    L+  +      ++Y+    K     + + + D+ + +    + R    
Sbjct: 61  FYKGYDIDITTELAKDLG---VTVEYVAAEWKNLVNGVVTDKYDM-TGSASLNMHRARVA 116

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYH 172
           G +                       +  +  S+ V +   T  E  + ++F        
Sbjct: 117 GYSQPYFYLAFVPVIQEKNMTRFKKWNDFNNVSVTVASSLGTVQESMVKEFFPKAKHDVI 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
                  +E      A+R             +     +      +  +   +P+A  + +
Sbjct: 177 DSEVRDYQE----LLANRATVIVTSNVEAATITRKFSQLKIAD-VKGMRRPTPIAMLLPR 231

Query: 233 GDTEWYNIVS 242
            D  W N ++
Sbjct: 232 DDQVWINYIN 241


>gi|319946946|ref|ZP_08021180.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319746994|gb|EFV99253.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 754

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 16/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L L  LF  +    A           +K   +T    F    ++  +KG D
Sbjct: 21  MKKKLVACLLFLFPLFAFASQAQAET---------VKVVFDTAYAPFEFKDSDQVYKGID 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  I        +   +A      +QS Q D +      T  RE    +    
Sbjct: 72  VEILDKVA-EINGWTLDKSFPGFDAAVN--MVQSGQADAIMAGMTKTKEREQVFAM--SD 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y         K   I+S  QL G ++ V+ GT  +  L      +    +   F+  +
Sbjct: 127 TYYDTKVVIATKKANKITSYDQLKGKTVGVKNGTAAQRFLQKNKDKYGY--NIKTFDTSD 184

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            ++ +      DA   D   +         
Sbjct: 185 LMNNSLSTGAVDAIMDDQPVIEYAIKQGQD 214



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 74/242 (30%), Gaps = 16/242 (6%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           ++    F        + G D++  +A++         ++            +Q+   D +
Sbjct: 306 DSSFAPFVFQNDQSKYTGIDMELIKAIAKD---QGFTLEISNPGFDAAVSDVQNGNADGM 362

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                 T  R+ +    F    Y       + +   ISS   L G ++ V+ GT ++  L
Sbjct: 363 IAGMTITDARKAT--FDFSDPYYTTNSILAVQESSKISSYEDLKGKTVGVKNGTASQTFL 420

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            +        Y    F     +  +  +    A   D   +   K    +  +     + 
Sbjct: 421 EEN--KSKYGYKIKTFSDGASMYDSLNSGSVAAIMDDEPVI---KYAIKQGRKFKTPIEG 475

Query: 221 ISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEEL-----GITQKNINQVSKDTTNPDVQ 274
                +A A+ +  + E   + +     +  + E           + ++ +  T+  +  
Sbjct: 476 TPSGQIAFAVQKDSNPELIEMFNNGLANLKESGEYQKILDKYLSSDSDETTDSTSVDETT 535

Query: 275 RF 276
            +
Sbjct: 536 IW 537


>gi|10954824|ref|NP_053244.1| hypothetical protein pTi-SAKURA_p005 [Agrobacterium tumefaciens]
 gi|41223319|ref|NP_396544.2| ABC transporter, substrate binding protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
 gi|20141544|sp|P35120|NOCT_AGRT5 RecName: Full=Nopaline-binding periplasmic protein; Flags:
           Precursor
 gi|6498177|dbj|BAA87629.1| tiorf4 [Agrobacterium tumefaciens]
 gi|159141743|gb|AAK90985.2| ABC transporter, substrate binding protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
          Length = 283

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 71/277 (25%), Gaps = 41/277 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F ++  L  +               K    +          +    A G   GFD
Sbjct: 1   MK---FFNLNALAAVVTGVLLAAGPT--QAKDYKSITIATEGSYAPYNFKDAGGKLIGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L   +     + +++         +L + + D +         RE  +   F  
Sbjct: 56  IDLGNDLCKRM---NIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIA--FSR 110

Query: 121 ITYFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTT 156
                   F+      +                               G    VQAGT+ 
Sbjct: 111 PYLLTPMTFLTTADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSH 170

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E  +     +         ++ ++ +    +A R DA    +S L  L    D     + 
Sbjct: 171 EAFMKQMMPS----VQISTYDTIDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMF 226

Query: 217 LPDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            P +        +   I + D +   +      A + 
Sbjct: 227 GPRMTGGLFGKGVGVGIRKEDADLKALFDKAIDAAIA 263


>gi|255261936|ref|ZP_05341278.1| extracellular solute-binding protein, family 3 [Thalassiobium sp.
           R2A62]
 gi|255104271|gb|EET46945.1| extracellular solute-binding protein, family 3 [Thalassiobium sp.
           R2A62]
          Length = 282

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 84/255 (32%), Gaps = 23/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M     ++   L    F + +         ++ S++  IK++G ++ G++     ++   
Sbjct: 9   MSNTLGLAFAALTSTVFAAPAFAQSATQNLSSESVIESIKEQGVIRIGLSI-FTPWSMRD 67

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG+  GF++D  RAL+  +  D   ++++P         L S   D++      T  R 
Sbjct: 68  LNGELIGFELDVGRALAEDMGVD---VEFVPTAWDGIIPQLVSGNFDVIISGMSITPAR- 123

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            +L + F     + G   + +                 +   + G T    +A  F    
Sbjct: 124 -NLTINFSNPYAYSGLTVLANSSMTDGFAIEDYNSPDVTFAARRGATPATVIAQLFPEA- 181

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                ++F+               A           +      +  V   +    +  A 
Sbjct: 182 ---TLLLFDEDGAATQEVLNGNAHATMAAEPTPSMEQRRYPD-TLSVPFNESFLATGEAF 237

Query: 229 AIIQGDTEWYNIVSW 243
           A+ +GD +  N  + 
Sbjct: 238 AMRKGDIDALNFFNN 252


>gi|145225811|ref|YP_001136489.1| protein kinase [Mycobacterium gilvum PYR-GCK]
 gi|145218297|gb|ABP47701.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Mycobacterium gilvum PYR-GCK]
          Length = 583

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 77/247 (31%), Gaps = 14/247 (5%)

Query: 14  ILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
            L   + +  A+ +  D++  G L  G+N          A+G   GFDV+   A+S  + 
Sbjct: 323 ALPAGAVAEIAATVPADVRAAGRLVIGVNVPYAPMEFKNADGQLVGFDVELMDAVSRVLG 382

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             P    Y           +     D+   +   T  RE    + F       G  +   
Sbjct: 383 LVPD---YRDTAFDTILPGVVDGTYDVGMSSVTDTKEREEL--VDFV-TYLQAGTQWARR 436

Query: 133 KKKGISSVSQL---SGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRA 188
               +   S      G +      T      +D   A  M     +VF+  +E+ +A   
Sbjct: 437 PGTALGPASACGLKVGVAEGTLQATEELPAKSDQCAAAGMPPIEMVVFKSQDEVTSALVK 496

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              DA + D        +   R  + V   D+   +P    + + ++     +      +
Sbjct: 497 GEVDAMSADSPVT-GFAIKLSRG-DLVPAGDVFDSAPYGWPVAK-ESGMTEPLQRALEHL 553

Query: 249 VTAEELG 255
           +   E  
Sbjct: 554 METGEYR 560


>gi|308178202|ref|YP_003917608.1| polar amino acid ABC transporter substrate-binding protein
           [Arthrobacter arilaitensis Re117]
 gi|307745665|emb|CBT76637.1| polar amino acid ABC transporter, substrate-binding protein
           [Arthrobacter arilaitensis Re117]
          Length = 262

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 85/267 (31%), Gaps = 26/267 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDI---------KKRGFLKCGINTGLVGFAEVKAN 53
           +  F + + L  +   + +   S  G              G L    +     F   K +
Sbjct: 5   RKKFAAAIALSSVALLAMTACGSDSGSSSESEGAAFPLNEGKLTVCSDIPYEPFEFKKGD 64

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+D    ++     D + I     +       L + + DI   +   T  R+  
Sbjct: 65  -EIVGFDMDVAAEIAKDAKLDLNVIDD---SFDSIESGLFNTKCDIAISSISITDARKE- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F      D    I     GI+ +       + VQ  TT E      +         
Sbjct: 120 -KMNFSTPYMDDDLVLIAKNGSGITDLETAKDKKVGVQQATTGEK-----YGKEQGLEQL 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + FE       A  A++ +A  G+ S    L        +   + +  +   L  A+ + 
Sbjct: 174 VGFEDAGLQTQALLANQVEAVLGNQSV---LGYAVKDEPDFKAVANFKTGEQLGIAVPKD 230

Query: 234 DTEWYNIVSWTHYAMVTA---EELGIT 257
           + +   +V+ T   +  A   EEL + 
Sbjct: 231 NADTLELVNGTLKRLTDAGTMEELTVK 257


>gi|68535883|ref|YP_250588.1| putative secreted protein [Corynebacterium jeikeium K411]
 gi|68263482|emb|CAI36970.1| putative secreted protein [Corynebacterium jeikeium K411]
          Length = 318

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 71/212 (33%), Gaps = 12/212 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +++ +G +  G N          ++G+  GF++D  RA  + +  D   ++   ++    
Sbjct: 59  EVQAKGKITVGTNPPYAPNEFKDSDGNIIGFEMDLIRAAGAMMGLD---VEVSQMDFNLI 115

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             A+ +  +D+ +     T  R+      F                +         G  +
Sbjct: 116 LPAISAGSVDVGASAFTDTEERQK--NYDFVDFYSAGISWATQPGNEDNIDPDNACGLKV 173

Query: 149 CVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            VQ GT ++         +           +V+E+ +    A    + +AY+ D   +  
Sbjct: 174 AVQKGTYSDTDEVQGRSDECEAQGKEPIEKLVYEKADAAATATILKKANAYSSDSPVIDF 233

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               +D     V + +    +P    + + + 
Sbjct: 234 AIARSDGK--LVRVGEPFDTAPFGMGVKKNNP 263


>gi|16081001|ref|NP_391829.1| ABC transporter binding lipoprotein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221311923|ref|ZP_03593770.1| hypothetical protein Bsubs1_21311 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221316247|ref|ZP_03598052.1| hypothetical protein BsubsN3_21222 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321159|ref|ZP_03602453.1| hypothetical protein BsubsJ_21170 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325443|ref|ZP_03606737.1| hypothetical protein BsubsS_21321 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313516|ref|YP_004205803.1| putative ABC transporter binding lipoprotein [Bacillus subtilis
           BSn5]
 gi|1731313|sp|P54952|YXEM_BACSU RecName: Full=Probable amino-acid-binding protein yxeM; Flags:
           Precursor
 gi|1408498|dbj|BAA08329.1| yxeM [Bacillus subtilis]
 gi|2636496|emb|CAB15986.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|291486572|dbj|BAI87647.1| hypothetical protein BSNT_06060 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019790|gb|ADV94776.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis
           BSn5]
          Length = 264

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 70/214 (32%), Gaps = 13/214 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       FA    NG   GFDV+   A++  I     K+ +  L        LQ+
Sbjct: 34  VLHVGATGQSYPFAYK-ENGKLTGFDVEVMEAVAKKI---DMKLDWKLLEFSGLMGELQT 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            ++D +S     T  R+ +    F     + G   ++ K    I SV  L G ++    G
Sbjct: 90  GKLDTISNQVAVTDERKET--YNFTKPYAYAGTQIVVKKDNTDIKSVDDLKGKTVAAVLG 147

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +     L        +  +   +E  E         R DAY    + L A       P  
Sbjct: 148 SNHAKNLESKDPDKKI--NIKTYETQEGTLKDVAYGRVDAYVNSRTVLIAQIKKTGLP-- 203

Query: 214 HVILPDIISKSPLAPAIIQGD--TEWYNIVSWTH 245
             +  D I    +A    + D   +    V+   
Sbjct: 204 LKLAGDPIVYEQVAFPFAKDDAHDKLRKKVNKAL 237


>gi|262283287|ref|ZP_06061053.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA]
 gi|262260778|gb|EEY79478.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA]
          Length = 521

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 79/259 (30%), Gaps = 28/259 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K FF SIL LI+L F +          ++   +L+ G+      F             
Sbjct: 1   MKKIFF-SILSLILLTFGAS-------QIVQADEYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +   P  ++    +      AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQVAKKIAKELGKKPLIVK---TSWNGLIPALTSGKIDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +    L          +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVVLVQKNGAYAQAKTLDDFKGAKIT-SQQGVYLYNLISQLK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLA 227
                       ++  A  +   D Y  +   AL A    +            + K   +
Sbjct: 167 GAKQETAMGDFAQMRQALESGVIDGYISERPEALTAEAANSSFKMIQFKKGFEVGKEDAS 226

Query: 228 PAII-QGDTEWYNIVSWTH 245
            AI  Q D +    V+   
Sbjct: 227 IAIGMQKDDQRMAKVNEAI 245


>gi|227818596|ref|YP_002822567.1| extracellular solute-binding protein [Sinorhizobium fredii NGR234]
 gi|36958851|gb|AAQ87276.1| Glutamine-binding protein [Sinorhizobium fredii NGR234]
 gi|227337595|gb|ACP21814.1| putative bacterial extracellular solute-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 255

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 11/220 (5%)

Query: 35  FLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            ++ G+ N     F     +G W G++++   A+ + +         + ++       L+
Sbjct: 22  EVRFGVMNEAYPPFFTKDPSGKWVGWEIELMDAVCAEM---KETCSIVDMSWDGLIPGLE 78

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           +K+ D++  +   T  R+ +  + F    Y      I  K     ++   ++  +I +Q 
Sbjct: 79  AKKFDVIWSSMSITDERKKT--IDFTDKYYNTPSKLIGAKDGKAGAAPDDVADKTIGIQV 136

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRP 211
            T        YF     K     +  ++E      A R D   GD       LK    + 
Sbjct: 137 STIQSEYYKKYFA---DKASEQSYATLDEAFQDLAAGRIDYVFGDAIPLAEFLKSDFGKD 193

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                       + L   I  G  +    +     A + A
Sbjct: 194 CCEDKGNVKDDPAILGTGIGGGLRKDDAALRDKLNAAIAA 233


>gi|116491766|ref|YP_811310.1| ABC-type amino acid transport system, permease and periplasmic
           component [Oenococcus oeni PSU-1]
 gi|116092491|gb|ABJ57645.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Oenococcus oeni PSU-1]
          Length = 468

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +     F   K NG + G DV+  RA++     +   +   P++       + S Q+D 
Sbjct: 21  TDVTYPPFEFQKKNGTYTGIDVEIIRAIAKK---EGFTMTLKPISFNSGAQMVLSGQMDG 77

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +      T  R+      F    Y  G  + + KK  I+ +SQL G ++ ++ GT +   
Sbjct: 78  IIAAMTITSERKKV--YDFSKPYYRTGIIWAVSKKSHITKLSQLKGKTVALKTGTASADY 135

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                K +  K     F     +          A               +     +    
Sbjct: 136 AKSLQKKYGFK--ITYFSDSNTMYNDVVVGNSAA--TFEDQSVMKYAIKNGLQLKIPSNK 191

Query: 220 IISKSPLAPAIIQGDTE 236
           I +      A+ +G  E
Sbjct: 192 IGNAGYYGFAVKKGKNE 208


>gi|322690624|ref|YP_004220194.1| ABC transporter substrate-binding protein [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320455480|dbj|BAJ66102.1| putative ABC transporter substrate binding component
           [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 318

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 64/224 (28%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +A+++        I        
Sbjct: 70  DSVTSDGTLTVGTDTSYAPAEFLAEDGKTPVGFDVDLSKAIAAVFGLKEETIS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + D+   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDLGISSFTVTKER--MQAVDFVTYFKAGSTYVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + +   +  D +   
Sbjct: 184 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSSKLQTDVTTAVASGKASIFYADSTVSA 243

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                         L +     P A AI +GDT+    V     
Sbjct: 244 --YAIKQTGDTLETLGEDAGGVPEAVAIKKGDTKTAEAVQKAIQ 285


>gi|331267034|ref|YP_004326664.1| ABC transporter-amino acid transport; amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
 gi|326683706|emb|CBZ01324.1| ABC transporter-amino acid transport; amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
          Length = 522

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 84/284 (29%), Gaps = 34/284 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  L +           ++  ++   +L+ G+      F             
Sbjct: 1   MKKLCLSILASLALTL--------GLVNQVQADEYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   S      +   + L D      
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLEDFSGAKIT-SQQGVYLYDLISQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  A   DAY  +       +  N +       P   +      
Sbjct: 167 GVKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAESANAKFKMIQPQPGFKTGEEDTA 226

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +A  + + D+    I      A +           ++++ ++  
Sbjct: 227 IAIGLRKDDSRISQI-----NASIETISKDEQVALMDRMIQEQP 265


>gi|78042822|ref|YP_360841.1| extracellular solute-binding protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994937|gb|ABB13836.1| extracellular solute-binding protein, family 3/sensory box
           histidine kinase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 656

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 75/256 (29%), Gaps = 17/256 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V    ++ +           L   K    +  G +        +  N +  GFDV
Sbjct: 3   KKGVRVIFGIILFIASFLVLAANPALAREK---VIVVG-DNDYPPLCYLDGNNNPAGFDV 58

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++     D   I+   L   E    ++  + D+L         R  +    F   
Sbjct: 59  DLIVAVARKAGID---IEIKLLPWAEARKMVEDGKADVLLG---VNYTRTRAKLYDFTEA 112

Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              + Q   +      + S   L    + VQ        + DY            FE  +
Sbjct: 113 YLENRQVIFVRSDNYVVKSFDDLRNLKVGVQRADVALDFIGDY-----PDITLEYFENQQ 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE-WYN 239
           +   A   +  DA  G+           +  ++  ++   +S +     + +G  +    
Sbjct: 168 QALKALGQNEVDAVIGNYYTGLYWLQKLNLENKIKVVGIPLSITRYGLGVKKGQNQELLK 227

Query: 240 IVSWTHYAMVTAEELG 255
            ++     + T  EL 
Sbjct: 228 KLNGAIVKLKTTGELD 243


>gi|300023793|ref|YP_003756404.1| extracellular solute-binding protein family 3 [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525614|gb|ADJ24083.1| extracellular solute-binding protein family 3 [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 285

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 78/264 (29%), Gaps = 31/264 (11%)

Query: 4   DFFVSILCLIILFFT--SFSTNASIL-------------GDIKKRGFLKCGINTGLVGFA 48
             F + L + +      + + NA  L                 +R  ++   ++    F 
Sbjct: 9   RLFGAALVVALASSAGWAVAQNAKTLPSLSDTRVAPQQTEAASRRVVIRFLTDSDFPPFD 68

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               +G   GF+VD  RA+   +    +          E F  L++ + D +      T 
Sbjct: 69  FYDEDGVLIGFNVDLARAICLEL---NTSCDIKARPWDELFGGLKNGEADAVIAAHRVTP 125

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKA 166
                  + F    +     F   K       + S L G  I V  GT  E  L  +F+ 
Sbjct: 126 A--ALKDVEFTDRYFHTPGRFAGRKDSPKVEMTPSGLDGQRIAVARGTAHEAYLKAFFR- 182

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDII 221
                  +VFE  +    A    + D    D  +L                    L    
Sbjct: 183 ---DSPLVVFENADLAREALAGGKADFIFDDGISLAFWLNGTLSRQCCEMRGGPYLEPKF 239

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
               LA A+ + D +   +++   
Sbjct: 240 FGDGLAIAVPKNDPQIRLLLNKGL 263


>gi|296453671|ref|YP_003660814.1| family 3 extracellular solute-binding protein [Bifidobacterium
           longum subsp. longum JDM301]
 gi|296183102|gb|ADG99983.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. longum JDM301]
          Length = 317

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGADTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 184 KVAVQTGTTQEEEVNKDNEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 241

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 242 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 285


>gi|184200187|ref|YP_001854394.1| putative amino acid ABC transporter amino acid-binding protein
           [Kocuria rhizophila DC2201]
 gi|183580417|dbj|BAG28888.1| putative amino acid ABC transporter amino acid-binding protein
           [Kocuria rhizophila DC2201]
          Length = 256

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 79/229 (34%), Gaps = 13/229 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
               +++     + +     +   N+    F   + +G   GFD+     ++  +    +
Sbjct: 22  TGCGTSSGDRSEESRSPEAFRVCTNSPYAPFEF-ERDGQTVGFDMSLGHEIARDMGRTLT 80

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +Q       E   AL   + D        T  R     + F    + D    +  +  G
Sbjct: 81  VVQADFHT-LESGAALNEDRCDAAISGMTITDQR--RQVVDFSQPYFNDQIALLTTRNSG 137

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+    +   ++ VQ  T+ E    D       K     FE V  + +A    +  A +G
Sbjct: 138 ITGFDSVGKNTVGVQHATSGEQYARD------KKLRVRRFEDVGRMFSALEDGQVKAVSG 191

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +IS    L        E  ++  + +   L  A+ +G+TE  + V+ T 
Sbjct: 192 NIS---TLSRQAKDRPELRLVQTVDTNENLGIAVKKGNTEILDAVNRTL 237


>gi|228476611|ref|ZP_04061293.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
 gi|228251806|gb|EEK10871.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus salivarius
           SK126]
          Length = 282

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 79/253 (31%), Gaps = 14/253 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK-----KRGFLKCGINTGLVGFAEVKANGD 55
           M     + I  + I      +  +S            +  +          F+  + NG+
Sbjct: 1   MKLKKILGITGVAIASVALLAACSSKSSKEASKSSGAKETINFATVGTTAPFSY-EENGE 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV+  +A+      D  ++++        F  L S +  +   N  ++  R+    
Sbjct: 60  LTGYDVEVAKAVFKD--SDKYEVKFQKTEWSSVFTGLDSAKYQMAGNNISYSEERD--QK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F            + K   I     ++G S  V  GT+T   L ++   H+ K   + 
Sbjct: 116 YLFSYPIGTTPAVLTVPKDSNIKKYDDIAGHSTQVVQGTSTATQLTEFNDKHSDKPVELN 175

Query: 176 FERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +      ++  +    + D    D   + A  + N++ S    +     + P        
Sbjct: 176 YTNENITQMLTSLNEGKYDFKIFDAPTVNA-IIKNNKLSNLKTIELKSDEQPYIYFLFAD 234

Query: 233 GDTEWYNIVSWTH 245
              +    V+   
Sbjct: 235 NQKDLQKFVNKRL 247


>gi|15674455|ref|NP_268629.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes M1 GAS]
 gi|13621552|gb|AAK33350.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes M1 GAS]
          Length = 522

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 91/296 (30%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 1   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     ++F   +Y      ++    K    +S+   SGA +  Q G      L     
Sbjct: 110 ER--RNEISFSNSSYTSQPVLVVTANGKYADATSLKDFSGAKVTAQQGVWHVNLLTQLKG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A              ++  A  +   DAY  +       +  + R     +         
Sbjct: 168 AKLQT----PMGDFSQMRQALTSGVIDAYISERPEAMTAEAADSRLKMITLKKGFAVAES 223

Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLG 278
            A   +  + + +    V+         + + +    + +   +    D +  FLG
Sbjct: 224 DAAIAVGMKKNDDRMATVNQVLEGFSQTDRMALMDDMVTKQPVEKKAEDAKASFLG 279


>gi|15598671|ref|NP_252165.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa PAO1]
 gi|107103008|ref|ZP_01366926.1| hypothetical protein PaerPA_01004077 [Pseudomonas aeruginosa PACS2]
 gi|218890277|ref|YP_002439141.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa
           LESB58]
 gi|254242160|ref|ZP_04935482.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa 2192]
 gi|296388007|ref|ZP_06877482.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa PAb1]
 gi|313108836|ref|ZP_07794821.1| cyclohexadienyl dehydratase [Pseudomonas aeruginosa 39016]
 gi|12231027|sp|Q01269|PHEC_PSEAE RecName: Full=Cyclohexadienyl dehydratase; Includes: RecName:
           Full=Prephenate dehydratase; Includes: RecName:
           Full=Arogenate dehydratase; Flags: Precursor
 gi|9949619|gb|AAG06863.1|AE004768_8 cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa PAO1]
 gi|126195538|gb|EAZ59601.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa 2192]
 gi|218770500|emb|CAW26265.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa
           LESB58]
 gi|310881323|gb|EFQ39917.1| cyclohexadienyl dehydratase [Pseudomonas aeruginosa 39016]
          Length = 268

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 72/246 (29%), Gaps = 18/246 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I + G L+         F+     G + GFDVD  + L+ ++      +     +
Sbjct: 28  SRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVP---TS 84

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----HKKKGISSV 140
                      + DI        L R+      F      DG+  I       +      
Sbjct: 85  WPNLMRDFADDRFDIAMSGISINLERQR--QAYFSIPYLRDGKTPITLCSEEARFQTLEQ 142

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
               G +  V  G T E     + +A+  K   +V      I       + D    D   
Sbjct: 143 IDQPGVTAIVNPGGTNE----KFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDA-I 197

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
              L+         V        +  A  + + +  +   V    +    AE+ G+ ++ 
Sbjct: 198 EARLQSRLHPELCAVHPQQPFDFAEKAYLLPRDE-AFKRYVDQWLH---IAEQSGLLRQR 253

Query: 261 INQVSK 266
           +    +
Sbjct: 254 MEHWLE 259


>gi|330951255|gb|EGH51515.1| cystine transporter subunit [Pseudomonas syringae Cit 7]
          Length = 137

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 6/136 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F  S + L++    +        L  IK  G L  G+      F+ V  +G   GF+
Sbjct: 7   RRTFLFSAMGLMLNAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+F  AL+  +       +  P        AL SK++D++      +  R+      F  
Sbjct: 67  VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKK--KYDFSE 121

Query: 121 ITYFDGQGFIMHKKKG 136
                G   ++ K   
Sbjct: 122 PYTVSGIQALVLKTNE 137


>gi|258654441|ref|YP_003203597.1| family 1 extracellular solute-binding protein [Nakamurella
           multipartita DSM 44233]
 gi|258557666|gb|ACV80608.1| extracellular solute-binding protein family 3 [Nakamurella
           multipartita DSM 44233]
          Length = 337

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 69/246 (28%), Gaps = 21/246 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
              K+ G +    +          + +    G D+D   A+   +      +   P +  
Sbjct: 82  DKFKQSGTIIVATDPTYPPNEFLPEGSNTPVGMDIDLINAVGQVLG---LTVTVEPASFD 138

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLS 144
                L + + D+   +   T  RE    + F    +  G   ++       I S + L 
Sbjct: 139 GIIAGLNAGRYDVGISSFTDTKERE--QSVNFV-TYFTAGTSIMVPAGNPKNIQSATDLC 195

Query: 145 GASICVQAGTTTELTLAD----------YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           G  +  Q GTT    L D             A         F +  +++AA  A R DAY
Sbjct: 196 GLPVGAQNGTTQLDQLTDATVEGSVVKACQDAGKEPPVAQGFPKQTDVNAALVAGRIDAY 255

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D                   +      +P   AI +   E    +      ++     
Sbjct: 256 MADSP--VVDYAVKVTGDRFQKVGGDEGAAPYGIAIPKEPAELTPAIQAAMQHLIDTGAY 313

Query: 255 GITQKN 260
                N
Sbjct: 314 TKILDN 319


>gi|16273101|ref|NP_439335.1| arginine ABC transporter periplasmic-binding protein [Haemophilus
           influenzae Rd KW20]
 gi|260581120|ref|ZP_05848941.1| arginine-binding periplasmic protein [Haemophilus influenzae RdAW]
 gi|1168523|sp|P45091|ARTI_HAEIN RecName: Full=ABC transporter arginine-binding protein; Flags:
           Precursor
 gi|972901|gb|AAA95978.1| ArtI/J [Haemophilus influenzae]
 gi|1574104|gb|AAC22830.1| arginine ABC transporter, periplasmic-binding protein (artI)
           [Haemophilus influenzae Rd KW20]
 gi|260092249|gb|EEW76191.1| arginine-binding periplasmic protein [Haemophilus influenzae RdAW]
          Length = 239

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 80/257 (31%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGASVAASAQ--------------ELTFAMQPSYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++           L++K+ D      D T  R     + F  
Sbjct: 47  VDVTNAICQEI---QATCKFKSETFDALIPNLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + L  +       +     +       + L  A+ + + +  
Sbjct: 154 NAILDLKSGRIDIIFGDTAVLADMISKEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKDLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 AQLNKGLAAIKANGEYQ 230


>gi|77404972|ref|ZP_00782073.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae H36B]
 gi|77176411|gb|EAO79179.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae H36B]
          Length = 270

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 61/174 (35%), Gaps = 12/174 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +SI  +      + S  AS    +     LK   ++    F     +G +KG+D
Sbjct: 1   MFKKIILSIATIAATASLAVSVQAS--EKV----ELKVATDSDTAPFTYQ-KDGKFKGYD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+         K+ +  +        + + + D+ + +  +   R       F  
Sbjct: 54  VDVVKAVFK---GSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAE--XYLFSD 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                    +  K     S+S LSG S  V +G      L ++ K H  K    
Sbjct: 109 PISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIK 162


>gi|313897850|ref|ZP_07831391.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Clostridium sp. HGF2]
 gi|312957385|gb|EFR39012.1| putative arginine ABC transporter, periplasmic arginine-binding
           protein ArtP [Clostridium sp. HGF2]
          Length = 259

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 68/223 (30%), Gaps = 16/223 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K     +  +++       +            KK   L    N+G   +  V   G+ 
Sbjct: 1   MKKLLTGLMAVVMMAGLAGCGSKDDGAGEGSDTAKK--ELTVYTNSGYKPYEMVDEKGNL 58

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D     +         +++  ++      +++  + DI      +T  R     +
Sbjct: 59  YGFDIDVMNEAAKLAGY---TVKWEDVDFDGIVPSVKQGKADIGIAGITYTEERAK--QV 113

Query: 117 AFRPITYFDGQG---FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            F  + Y         +  K  G+     + G  I  Q GT  E  L      + +K   
Sbjct: 114 DFSDVYYAGEDAQNYVLTMKSSGMKKTEDIKGKKIGTQMGTIQESILNSLQDEYKLKLDK 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
                  ++    +    DA   + +    L   N+  S +  
Sbjct: 174 RKA--YSDMVLEMKKGVIDAMVVEKAVAEELAADNEDLSYYKF 214


>gi|317049577|ref|YP_004117225.1| Arogenate dehydratase [Pantoea sp. At-9b]
 gi|316951194|gb|ADU70669.1| Arogenate dehydratase [Pantoea sp. At-9b]
          Length = 255

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 75/257 (29%), Gaps = 15/257 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F ++     L  +  +   S L  +++   L+         ++ ++++G ++G D
Sbjct: 1   MKTMLFSAL-----LLVSGVAQAQSHLDQVRESKTLRVCTTGDYKPYSYLRSDGQYEGLD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAF 118
           +   ++L+ ++    +K+Q++P   K       ++  DI       TL R+         
Sbjct: 56  ISMAQSLAESLG---AKVQWVPTTWKTLSEDFVAQHCDIALGGVSVTLKRQQIAWFAQPL 112

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K             +   AG T E  +  +           +F  
Sbjct: 113 GVDGKIPLVRCADKAKYQTIEQINQPQVRVIEPAGGTNEAFVHSHLP----NASLTLFHD 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I      ++ D    D S     +    +         +      A  I + D  W 
Sbjct: 169 NVTIFQQLVDNKADVMITDASEALFQQKHYPQLCALNPDQPMQYGE-KAYMIPRDDMSWK 227

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +      +  
Sbjct: 228 QYVDQWLHLSTATGDYA 244


>gi|239931080|ref|ZP_04688033.1| amino acid ABC transporter solute-binding protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291439450|ref|ZP_06578840.1| amino acid ABC transporter protein, solute-binding component
           [Streptomyces ghanaensis ATCC 14672]
 gi|291342345|gb|EFE69301.1| amino acid ABC transporter protein, solute-binding component
           [Streptomyces ghanaensis ATCC 14672]
          Length = 304

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 78/242 (32%), Gaps = 12/242 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +    +L  ++  G ++ GI    + F  +  +G+  G   +  R +   +  D  ++
Sbjct: 44  AGTNGGDLLDRLRATGVVRLGIAGE-IPFGYINKDGELTGEAPELARVIFKRLGVD--RV 100

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-- 136
           Q +P         L S+Q D+++         +    + F    Y     FI+ K     
Sbjct: 101 QPVPTEFGSLIPGLNSQQFDVVAAGMYINP--DRCEQVIFSDPDYQMLDSFIVRKGNPKG 158

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           + S   +         G T    +A   +A   +   ++         A  A R D + G
Sbjct: 159 LHSYQDVVEKKARFATG-TGYAEIAYAVEAGYPESDILIVPDQVAGLNAVEAGRVDVFAG 217

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAMVTAE 252
                  +   + +         I+   P       A    +T+  +  +     +  + 
Sbjct: 218 TALTTREVVKKSSKAEVTEPFRPIVGGEPHVDGGGFAFRPTETKLRDAFNVELRKLKESG 277

Query: 253 EL 254
           EL
Sbjct: 278 EL 279


>gi|311740517|ref|ZP_07714344.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304037|gb|EFQ80113.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 295

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 9/223 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G N     F    ++G  +G ++D   A++  +  D   ++    +      A+Q
Sbjct: 56  GVLTAGTNPPYAPFQLKDSHGALQGVELDLAHAVAGVLGLDFQPVE---QDFSMILPAVQ 112

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S QID+ +        R       F    Y   Q                 G ++ VQ  
Sbjct: 113 SGQIDMGASGFTDNPER--RNEFDFVDHLYAGIQWAERVDGPKKVDPDNPCGLTVAVQRT 170

Query: 154 TTTEL-TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           T +E   +     A N     + ++  +    A    R DA + D          ++   
Sbjct: 171 TVSETDDVRPKKDACNGDLTVLSYDTGDNAALAVLMGRADALSADSPVTAWAVNRSEGKM 230

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + D+   SP   A+ + D++     +     ++   E  
Sbjct: 231 --RQVGDMFQASPYGFAVPK-DSDLGKASAAALQHLIETGEYA 270


>gi|170016703|ref|YP_001727622.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803560|gb|ACA82178.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 482

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 88/280 (31%), Gaps = 24/280 (8%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K      +S++  + L   +  TNAS      ++       +     F     N  + 
Sbjct: 1   MKKTSQFLILSLIAFVSLISGTAYTNAS------EKPNYVITTDATYPPFDFQDKNNQYT 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D +  + ++     +       P++      ++ S Q D +      T  R+      
Sbjct: 55  GIDQEILKTIAKR---EGFTYTLKPMSFNAATQSVSSDQADGVIAGMSITDERKAV--YD 109

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G G+ + K   I ++  L G ++ ++ GT+         K +  K     F 
Sbjct: 110 FGTPYYRSGIGWAVKKGSNIKALKDLKGKTVALKTGTSGADYALSIQKEYGFK--VTYFN 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYAL--------KLTNDRPSEHVILPDIISKSPLAPA 229
             + +          A  GD+  +            +    P +       + K   A  
Sbjct: 168 DSDTLYNDVINDNAQATFGDLPVIQYAVKNGTKLKVMNPKAPIQAGWYGFAVKKGQNAKL 227

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +   +  +  I     Y  + A+ LG +        KD +
Sbjct: 228 LASFNHGFAEIKKDGTYDKIVAKYLGASAATFTGSKKDNS 267


>gi|172065297|ref|YP_001816009.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171997539|gb|ACB68456.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 264

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 80/257 (31%), Gaps = 19/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      + L        +      G       ++  ++           +G   GF 
Sbjct: 1   MKQWMAALAVALTATTIAGAAQAGDWTGK-----EIRLAVDPTYPPLEYKLPDGTLTGFG 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL + +    ++  ++  +       L +++ D+++ +   T  R     +AF  
Sbjct: 56  IDITNALCAEL---HARCVWVESSFDGMIPGLLARKFDVIASSMTITPKR--MQQIAFTN 110

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    I  K    + + + L G  + V+ G+         ++   ++     ++  
Sbjct: 111 RISNAPARLIARKGSPLLPTAASLKGKRVGVEQGSAQADYAVANWQPAGVQIE--SYQNQ 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
            ++ A     R DA      A     L   +  + + +   I  +          + + D
Sbjct: 169 GQVYADLVTGRLDAAFQASIAASDGFLKKPQGKDFMFVGAAIDDAKYFGQGDGLGLRKQD 228

Query: 235 TEWYNIVSWTHYAMVTA 251
            +  +  +    A + A
Sbjct: 229 ADLRDAFNRAL-ATILA 244


>gi|70725640|ref|YP_252554.1| hypothetical protein SH0639 [Staphylococcus haemolyticus JCSC1435]
 gi|68446364|dbj|BAE03948.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 266

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 68/219 (31%), Gaps = 18/219 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M +  FV++  + +L       ++    D K          LK G       F       
Sbjct: 1   MKRLLFVALALIFVLAACGNGGSSDKNSDSKSSSSNSDSKTLKVGTEGTYAPFTFHNKQD 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D+D  +A++         +++   +    F  L +K+ D+++        RE   
Sbjct: 61  KLTGYDIDVIKAVAKEKGYK---LKFNETSWDSMFAGLDAKRFDVIANQVGVNKDREKKY 117

Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +     ++   +K I S + + G  +  Q  T+    LA    A       
Sbjct: 118 K--FSTPYTYSSAVLVVRENEKNIKSFNDVKGKKMA-QTFTSNYGQLAKDKGA-----DI 169

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
              +   +      ++R D    D  +    K       
Sbjct: 170 TKVDGFNQAMDLLLSNRVDGTFNDSLSYLDYKKQKPNAK 208


>gi|28896146|ref|NP_802496.1| ABC transporter ATP-binding protein [Streptococcus pyogenes SSI-1]
 gi|28811396|dbj|BAC64329.1| putative ABC transporter (ATP-binding protein) [Streptococcus
           pyogenes SSI-1]
          Length = 299

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 37  SQKSSWETIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 93

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +        +  
Sbjct: 94  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMAKK 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 153 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 209

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 210 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 269

Query: 257 TQKNI 261
             +  
Sbjct: 270 ISETY 274


>gi|283835518|ref|ZP_06355259.1| ABC transporter, substrate binding protein [Citrobacter youngae
           ATCC 29220]
 gi|291068724|gb|EFE06833.1| ABC transporter, substrate binding protein [Citrobacter youngae
           ATCC 29220]
          Length = 310

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 94/260 (36%), Gaps = 11/260 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K   +    L+       +        L  I  +  +  G       F+    N    G+
Sbjct: 9   KRILLCASVLMAWATPCLAGTPLQLHTLEQIASKQTITLGYQDDAFPFSWQNGN-APAGY 67

Query: 60  DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +D C    RAL + +     K++++  N+  +F+ +++   DI+     ++  R     
Sbjct: 68  SIDICNSIVRALKTKLQLKNLKVKWVLANSASQFVLIKNHMADIMCIPAFYSQSRHSI-- 125

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    YF    F+M K +   ++++LSG S+ V++GT     L     A+++  +  +
Sbjct: 126 SEFSLPFYFSSTRFVMRKNESNDNLAELSGHSVLVKSGTIYVEQLQKVNAANDLNINIHL 185

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234
                      +     A       L  +      P ++ +    + +  P    +   D
Sbjct: 186 NTNNITAFNELKNGEYSALISSTVLLKGMIAQTPTPEDYALSDIALSAPLPAGLLLPLHD 245

Query: 235 TEWYNIVSWTHYAMVTAEEL 254
            E+   V  T  +++T+ + 
Sbjct: 246 KEFKEFVDSTLSSLMTSNDF 265


>gi|154753|gb|AAA50511.1| transport protein [Agrobacterium tumefaciens]
          Length = 283

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 71/277 (25%), Gaps = 41/277 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F ++  L  +               K    +          +    A G   GFD
Sbjct: 1   MK---FFNLNALAAVVTGVLLAAGPT--QAKDYKSITIATEGSYAPYNFKDAGGKLIGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L   +     + +++         +L + + D +         RE  +   F  
Sbjct: 56  IDLGNDLCKRM---NIECKFVEQAWVGIIPSLTAGRYDAIMAAMGIQPAREKVIA--FSR 110

Query: 121 ITYFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTT 156
                   F+      +                               G    VQAGT+ 
Sbjct: 111 PYLLTPMTFLTTADSPLLKTQVAIENLPLDNIAPEQKAELDKFTKIFEGVKFGVQAGTSH 170

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E  +     +         ++ ++ +    +A R DA    +S L  L    D     + 
Sbjct: 171 EAFMKQMMPS----VQISTYDTIDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMF 226

Query: 217 LPDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            P +        +   I + D +   +      A + 
Sbjct: 227 GPRMTGGLFGKGVGVGIRKEDADLKALFDKAIDAAIA 263


>gi|323490176|ref|ZP_08095396.1| extracellular solute-binding protein family 3 [Planococcus
           donghaensis MPA1U2]
 gi|323396224|gb|EGA89050.1| extracellular solute-binding protein family 3 [Planococcus
           donghaensis MPA1U2]
          Length = 282

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 82/264 (31%), Gaps = 21/264 (7%)

Query: 1   MYKDF----FVSILCLIIL-FFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGF 47
           M K F       +  L I+   ++   +             +I++ G L    +  L   
Sbjct: 1   MKKLFWSKKLSMVAGLAIVSLLSACGNDEDTATEEEKSAWDEIQEEGSLTVATSGTLFPT 60

Query: 48  AEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +   + + +  GF+V+  R +   +     +I++  L   E   ++Q+ Q+D+ + + + 
Sbjct: 61  SYRSEGSDELTGFEVEVVREIGERL---ELEIEFTELGFDEMLTSVQTGQVDLAANDIEI 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           T  RE +   +      +           GI ++  L G      + +          + 
Sbjct: 118 TEDREENFIFSTPFKYSYGTAIVRSGDLSGIETLEDLEGKKAAGASTSVYMQ----MARE 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +  +         E         R D    D                 +      S S +
Sbjct: 174 YGAEEVVYDNATNETYLRDVAIGRTDVILNDYYLQTLALAAFPELEITIHPDLKYSPSEV 233

Query: 227 APAIIQGDTEWYNIVSWTHYAMVT 250
              + + ++E  + V+     M+ 
Sbjct: 234 GVVMNKDNSELADNVNGVIEEMLE 257


>gi|153813567|ref|ZP_01966235.1| hypothetical protein RUMOBE_03989 [Ruminococcus obeum ATCC 29174]
 gi|149830367|gb|EDM85459.1| hypothetical protein RUMOBE_03989 [Ruminococcus obeum ATCC 29174]
          Length = 271

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 93/287 (32%), Gaps = 21/287 (7%)

Query: 1   MY-KDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M  K     IL + IL  T +   N        ++  +  G +     +  +  +G   G
Sbjct: 1   MKGKRGIAGILLVGILAVTLTGCKNTDSSKKETEKPVITLG-SDNYPPYNYLNEDGVPTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DV+        +     ++  + ++ +E+   ++S +ID +                 +
Sbjct: 60  IDVELATEAFKRMGY---QVDVVQIDWEEKKELVESGEIDCIMGCFSM---EGRLDDYRW 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFE 177
                   Q   +++   I  +S L G ++ VQ+ T  E    D       K  + I   
Sbjct: 114 AGPYIASRQVVAVNENSDIYKLSDLEGKNLAVQSTTKPEGIFLDRTDERIPKLENLISLG 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E I         DA      ++       D      IL + +  + +  A  + D   
Sbjct: 174 HRELIYTFLAKGYVDAVAAHEESIVQYMKDYDAS--FRILEEPLMLTGIGVAFAKDDDRG 231

Query: 238 Y-NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
               +  T       EE+     ++  V K   +P  Q++L +D   
Sbjct: 232 ICEQMEQTL------EEMRQDGTSLKIVEKYLDDP--QKYLEVDDLG 270


>gi|89893484|ref|YP_516971.1| hypothetical protein DSY0738 [Desulfitobacterium hafniense Y51]
 gi|89332932|dbj|BAE82527.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 295

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 85/264 (32%), Gaps = 21/264 (7%)

Query: 7   VSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           V +L   +       T         S L   K++G +  G       +A   A+G   G 
Sbjct: 12  VGVLAFSVFALGGCGTTETKGGDGISTLEKAKEKGSVTVG-FANEKPYAYKTADGKLTGE 70

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V+  RA+   +  +  + +            LQ+K+ D+++     T  R     ++F 
Sbjct: 71  AVEIARAVLKELGINDMQGEL--TEFASLIPGLQAKRFDMVTAGMFITPERAE--QVSFA 126

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+   + K     + S   ++       A     +       +   K   +   
Sbjct: 127 NPEYSIGEAIAVKKGNPLDLHSYEDIAKHGTAKVAVPGGAIEYDYLVASGVPKDRIVTVP 186

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-------KSPLAPAI 230
            +    AA +A R D  T    ++ A   T + P+   ++            +   A A 
Sbjct: 187 DMPAALAALQAGRTDVITATGPSIQATLDTANDPNLERVMDFTQPVIDGESVRGYGATAF 246

Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254
              D+++    +     +  + EL
Sbjct: 247 RHEDSDFREAFNAELQKLKESGEL 270


>gi|158422440|ref|YP_001523732.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329329|dbj|BAF86814.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
          Length = 282

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 13/230 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75
             + S + S    I++   L+ G   G   +     A G WKGF +D  +AL+  +    
Sbjct: 28  AAAQSADESTFDRIRRTKKLRIGAVAGGAPYYNKDLATGQWKGFYIDISKALADEL---E 84

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            +++          L LQ+ +IDI           + +L + F    + +    +  K  
Sbjct: 85  CQLEITETTWGNSVLDLQANKIDIFFG---LNPTPKRALVVDFSVPVFSNAFTMLTRKDF 141

Query: 136 GISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              + ++L      I V  G++ +  ++            +  +  +E   A  + R DA
Sbjct: 142 APKTWAELNDPNVKIAVDVGSSHDQVVSRLCPKA----QIVRLKTADEATMALVSGRVDA 197

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               +     ++  N    + ++   + S +  A    + D  W + V+ 
Sbjct: 198 QCIILMLALTVRKKNPNVGQLLVPTPVFSTTSNAGFRRENDKTWRDYVNT 247


>gi|116492898|ref|YP_804633.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus pentosaceus ATCC 25745]
 gi|116103048|gb|ABJ68191.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Pediococcus pentosaceus ATCC 25745]
          Length = 488

 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 77/259 (29%), Gaps = 22/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEV- 50
           M K +   +L L+ +   + S   +             I KRG++  G +     +    
Sbjct: 1   MKKIYKFIMLALLAITVFATSGFTTSIKADQKDVTYDRIMKRGYIVLGTSPDYAPYEFQT 60

Query: 51  --KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G D+   + ++  +      ++   ++     +ALQ+ ++D++        
Sbjct: 61  TSNNKSKDVGMDISVAKDIADDLGVK---LKIKNMDFDSLLVALQTGKVDMVLSGM--NP 115

Query: 109 LREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
                  + F  + Y  GQ   I  K  GI                 + +  LA   K  
Sbjct: 116 SAARRKSVDFSDVYYKGGQSILINKKDAGIYKNKDSFKHKKIAAQTGSIQYNLA---KKQ 172

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PL 226
                    ++  ++  A + ++ +    +     A    N           + +     
Sbjct: 173 IDGAKVSGIQKGADLILALQTNKVEGVVMEKPTAEAYAANNSGIKVIQGGFTLNNDETST 232

Query: 227 APAIIQGDTEWYNIVSWTH 245
           A A+ +        ++ T 
Sbjct: 233 AVAMPKNSPVLRKKINTTI 251


>gi|170698796|ref|ZP_02889859.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170136274|gb|EDT04539.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 277

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 71/258 (27%), Gaps = 16/258 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M        L  +     +   + +       +  L   I      F           GF
Sbjct: 1   MKASVLTRTLAAVAFGALALHASFAAAQSASAKRTLNVAIVPNYPPFEYKDPATDKLAGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   AL++ +    +K+ ++  +  +   A+ ++++D++         R     + F 
Sbjct: 61  DVDLGEALAAKMG---AKLNWVETSFDQMMSAVATQRVDMILSGMTDLPTR--RDAVTFV 115

Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELT-----LADYFKAHNMKYH 172
                 G  F   K      + +  L G  +     T+           +  KA      
Sbjct: 116 D-YIETGPQFYTLKTRAGEFAQMGALCGKRVGSSRRTSFPDNTTAWSAENCVKAGKPAII 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +   +     R +R DA       L            +  +            + +
Sbjct: 175 VVGTDGSSDARMQLRQNRIDAAVQGGETLPYQNSLEQN--AYAPVGKPFLSQYTGIGVAK 232

Query: 233 GDTEWYNIVSWTHYAMVT 250
            +T     ++     ++ 
Sbjct: 233 SNTALSGALTTALNQLIA 250


>gi|331009088|gb|EGH89144.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 263

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 78/257 (30%), Gaps = 9/257 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + +   L++          S   L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKYSAFTALLLGMTGMAQAQESTSHLDKVLQAGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCEDKAMYETVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            + I       + D    D S     +              +      A  + + D  W 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLWAVNPTAYMQYGE-KAYLLPRDDVTWK 233

Query: 239 NIVSWTHYAMVTAEELG 255
           + V    +      E  
Sbjct: 234 SYVDQWLHLSKATGEYQ 250


>gi|189439800|ref|YP_001954881.1| amino acid ABC transporter/signal transduction systems periplasmic
           protein [Bifidobacterium longum DJO10A]
 gi|189428235|gb|ACD98383.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Bifidobacterium longum DJO10A]
          Length = 313

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 66  DSVAGDGTLTVGADTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 123 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 179

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 180 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 237

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 238 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 281


>gi|213692881|ref|YP_002323467.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|213524342|gb|ACJ53089.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|320459055|dbj|BAJ69676.1| putative ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 317

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGADTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 184 KVAVQTGTTQEEEVNKDNEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 241

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 242 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 285


>gi|225860617|ref|YP_002742126.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|225726620|gb|ACO22471.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|327390354|gb|EGE88695.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA04375]
          Length = 266

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATINFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|149010762|ref|ZP_01832133.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|303253944|ref|ZP_07340065.1| putative extracellular solute-binding protein [Streptococcus
           pneumoniae BS455]
 gi|147765243|gb|EDK72172.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|301801488|emb|CBW34180.1| putative extracellular solute-binding protein [Streptococcus
           pneumoniae INV200]
 gi|302599120|gb|EFL66145.1| putative extracellular solute-binding protein [Streptococcus
           pneumoniae BS455]
          Length = 266

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATINFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|116517131|ref|YP_816041.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae D39]
 gi|148992273|ref|ZP_01821996.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|148998293|ref|ZP_01825762.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|168488304|ref|ZP_02712503.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae SP195]
 gi|168492780|ref|ZP_02716923.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC3059-06]
 gi|168576481|ref|ZP_02722355.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae MLV-016]
 gi|169833691|ref|YP_001694098.1| glutamine ABC transporter substrate-binding protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|221231443|ref|YP_002510595.1| putative extracellular solute-binding protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854151|ref|YP_002735663.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae JJA]
 gi|225856318|ref|YP_002737829.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae P1031]
 gi|237649862|ref|ZP_04524114.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae CCRI 1974]
 gi|237821275|ref|ZP_04597120.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229353|ref|ZP_06963034.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255480|ref|ZP_06979066.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502412|ref|YP_003724352.1| amino acid ABC superfamily transporter ATP-binding protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|307067235|ref|YP_003876201.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|116077707|gb|ABJ55427.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae D39]
 gi|147755936|gb|EDK62980.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|147928899|gb|EDK79911.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|168996193|gb|ACA36805.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae Hungary19A-6]
 gi|183573129|gb|EDT93657.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae SP195]
 gi|183576894|gb|EDT97422.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC3059-06]
 gi|183577766|gb|EDT98294.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae MLV-016]
 gi|220673903|emb|CAR68409.1| putative extracellular solute-binding protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225723382|gb|ACO19235.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae JJA]
 gi|225725910|gb|ACO21762.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae P1031]
 gi|298238007|gb|ADI69138.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301793809|emb|CBW36201.1| putative extracellular solute-binding protein [Streptococcus
           pneumoniae INV104]
 gi|306408772|gb|ADM84199.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|332074424|gb|EGI84900.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA17570]
          Length = 266

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATINFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|94994194|ref|YP_602292.1| Cystine-binding protein [Streptococcus pyogenes MGAS10750]
 gi|94547702|gb|ABF37748.1| Cystine-binding protein [Streptococcus pyogenes MGAS10750]
          Length = 299

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 37  SQKSSWETIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 93

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +           
Sbjct: 94  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMVKK 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 153 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 209

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 210 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 269

Query: 257 TQKNI 261
             +  
Sbjct: 270 ISETY 274


>gi|15902589|ref|NP_358139.1| glutamine ABC transporter substrate-binding protein [Streptococcus
           pneumoniae R6]
 gi|182683551|ref|YP_001835298.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae CGSP14]
 gi|15458121|gb|AAK99349.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor precursor
           [Streptococcus pneumoniae R6]
 gi|182628885|gb|ACB89833.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae CGSP14]
          Length = 271

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 6   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 61  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 117 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATINFSGED 176

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 177 IGKRILDLANGEFDFLV 193


>gi|52424955|ref|YP_088092.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307007|gb|AAU37507.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 260

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++  + +  T+ +  +   L  + +   L          F+    NG ++G 
Sbjct: 1   MKKATLATLIAAMFVTATAQAQTSPDTLTKVLETKELVVCSPGDYKPFSF-DNNGKFEGV 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D    L+ ++    +K+  +    K       + + DI       TL R+        
Sbjct: 60  DNDLMDKLAQSMG---AKVTIVKTTWKTLMDDFTANKCDIAVGGISITLERQQKALFTEP 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFE 177
                              +V Q++   + + A    + E    +     N+  +     
Sbjct: 117 YFINGKTPIVRCENVDKYQTVEQINRPEVRIIANPGGSNEKYARNELSNANLTMN----A 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               I       + D +  + +        +      V     +  +     I  GD  +
Sbjct: 173 ENLTIFQQVIDKKVDVFVSEAAEAIVKAHEHKGVLCAVNPDKPLKPAQNGWLIHNGDYRF 232

Query: 238 YNIVSWTHY 246
            + V    +
Sbjct: 233 KSYVDQFLH 241


>gi|282890141|ref|ZP_06298672.1| hypothetical protein pah_c013o047 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499992|gb|EFB42280.1| hypothetical protein pah_c013o047 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 271

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 9/213 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G+      F  +   G   G  V+   AL   +      ++   +       AL++ 
Sbjct: 38  LMIGMELAYPPFEMIDQEGRPAGISVEIGYALGRYL---NRPVKIENIPFVGLIPALKTD 94

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID++  +   T  R     + F       G   ++ K   +SS+++ + +       + 
Sbjct: 95  KIDLIISSMSITKQRSA--SIDFSNPYLSVGLCLLVSKNSPLSSIAEGNQSKFKFVVKSG 152

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           T   +  Y + H  +   +V ++           + DA+  D   L   +     P+   
Sbjct: 153 TSGEV--YARKHLSQAQVVVLDKETSCVMEVVQGKADAFIYD--QLSVFQNWKKNPNTTR 208

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            L    ++      I +G+T     V+      
Sbjct: 209 ALLHPFTQEDWGIGIKKGNTALLEQVNQFLKEF 241


>gi|50123115|ref|YP_052282.1| putative amino acid ABC transporter binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613641|emb|CAG77092.1| putative amino-acid ABC transporter binding protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 263

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 18/251 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+L L   F  +   +       ++   LK G           + N    GFD
Sbjct: 1   MMKKVTLSVLALTTAFLVAGCDSGKS--GTEQEKVLKVGSTGQSYPSGFKQDN-KLVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +      ++++  +       L++K++D ++     T  R       F  
Sbjct: 58  VEVTEAIAKDLNYK---VEWVTADFSGLMGQLEAKKLDTVANVVAITPAR--QEKYNFAQ 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F G   + HK    I++++ L G ++    G+     L   F   +       +E  
Sbjct: 113 PYSFYGSQIVTHKDNTTINTLADLKGKTVAGVLGSNHVNNLKKAFA--DGSVTIRTYETR 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-------NDRPSEHVILPDIISKSPLAPAIIQ 232
           +       + R + Y      L A              P     +     K     A+ +
Sbjct: 171 DGAMNDALSKRVEGYVNSRPILLAEINKRNLPFKLVGEPLVIEEVSFPFHKDEKGDALRK 230

Query: 233 GDTEWYNIVSW 243
                   +  
Sbjct: 231 QFDAQLTKMRE 241


>gi|145639301|ref|ZP_01794907.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           PittII]
 gi|145271604|gb|EDK11515.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           PittII]
 gi|309751177|gb|ADO81161.1| Arginine ABC transporter, periplasmic-binding protein ArtI
           [Haemophilus influenzae R2866]
          Length = 239

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 80/257 (31%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGASVAASAQ--------------ELTFAMQPTYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++           L++K+ D      D T  R     + F  
Sbjct: 47  VDVTNAICQEI---QATCKFKSETFDALIPNLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + L  +       +     +       + L  A+ + + +  
Sbjct: 154 NAILDLKSGRIDIIFGDTAVLADMISKEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKDLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 AQLNKGLAAIKANGEYQ 230


>gi|227546357|ref|ZP_03976406.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227213338|gb|EEI81210.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 317

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGADTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 184 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 241

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 242 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 285


>gi|315226289|ref|ZP_07868077.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Parascardovia denticolens DSM 10105]
 gi|315120421|gb|EFT83553.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Parascardovia denticolens DSM 10105]
          Length = 367

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 13/230 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            DIK  G L  G N           +     G+++D  R L   +     +++ +  N  
Sbjct: 66  KDIKDSGELTIGTNAIYAPAEYTGEDTKTIMGYEIDIARGLGKVMG---LRVRPIESNFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  RE    + F           +        +V  L GA
Sbjct: 123 NIIPAMGS-KFDLGMSAFTITAEREK--SVNFVQHYRAGLSFVVTRGNPRKLAVGNLCGA 179

Query: 147 SICVQAGTTTELTLADYFK----AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           +  VQ GT  E ++    +              +        A    + D    D     
Sbjct: 180 TASVQTGTAQEESILAMARTCKAQGKATLTVKSYADQASATIALVNKQVDLMYTDTP--V 237

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A            +L      +P+   I + + +    V      ++ + 
Sbjct: 238 AAYAVKQTDGALQLLGRPQEVAPMGIVIAKDNMKLTKAVQAALQKLIDSG 287


>gi|172065442|ref|YP_001816154.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171997684|gb|ACB68601.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 277

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 71/258 (27%), Gaps = 16/258 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M        L  +     +   + +       +  L   I      F           GF
Sbjct: 1   MKASVLTRTLAAVAFGALALHASFAAAQSASAKRTLNVAIVPNYPPFEYKDPATDKLAGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   AL++ +    +K+ ++  +  +   A+ ++++D++         R     + F 
Sbjct: 61  DVDLGEALAAKMG---AKLNWVETSFDQMMSAVATQRVDMILSGMTDLPTR--RDAVTFV 115

Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELT-----LADYFKAHNMKYH 172
                 G  F   K      + +  L G  +     T+           +  KA      
Sbjct: 116 D-YIETGPQFYTLKTRAGEFAQMGALCGKRVGSSRRTSFPDNTTAWSAENCVKAGKPAII 174

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  +   +     R +R DA       L            +  +            + +
Sbjct: 175 VVGTDGSSDARMQLRQNRIDAAVQGGETLPYQNSLEQN--AYAPVGKPFLSQYTGIGVAK 232

Query: 233 GDTEWYNIVSWTHYAMVT 250
            +T     ++     ++ 
Sbjct: 233 SNTALSGALTTALNQLIA 250


>gi|304394964|ref|ZP_07376848.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304357217|gb|EFM21580.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 261

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 97/251 (38%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K     +L  II+F +  + +A        R  L+ G +     F   + NG+  GF+
Sbjct: 1   MHKK--TGLLTAIIIFVSFPAASAV-------RDALRIGADLTNPPFQYREKNGEPGGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+  ++     +  Y+      +  AL ++++D++      T  R+    + F  
Sbjct: 52  IDVTKAVCKSV---NVRCIYVVNTFDAQIPALLARKVDVILP-LGVT--RKRQDAIDFSR 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +      +  K+  +   +Q L G +I VQ G+  E     Y++   +      +  +
Sbjct: 106 YVFHLPTRLVARKEIHLLPETQSLRGKNIAVQQGSIQEAYADKYWRPAGVF--VKNYPDL 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
           E I     A R +       AL    L   +  +  +    ++ + L     A  I QGD
Sbjct: 164 EAIYEDLYAGRVEGALVPSVALTYGFLRTPQGIDFELKGPEVTDADLFSRGSAYGIRQGD 223

Query: 235 TEWYNIVSWTH 245
           +    +++   
Sbjct: 224 SSTKRLLNKGL 234


>gi|294786679|ref|ZP_06751933.1| serine/threonine-protein kinase PknD [Parascardovia denticolens
           F0305]
 gi|294485512|gb|EFG33146.1| serine/threonine-protein kinase PknD [Parascardovia denticolens
           F0305]
          Length = 349

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 13/230 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            DIK  G L  G N           +     G+++D  R L   +     +++ +  N  
Sbjct: 48  KDIKDSGELTIGTNAIYAPAEYTGEDTKTIMGYEIDIARGLGKVMG---LRVRPIESNFD 104

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  RE    + F           +        +V  L GA
Sbjct: 105 NIIPAMGS-KFDLGMSAFTITAEREK--SVNFVQHYRAGLSFVVTRGNPRKLAVGNLCGA 161

Query: 147 SICVQAGTTTELTLADYFK----AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           +  VQ GT  E ++    +              +        A    + D    D     
Sbjct: 162 TASVQTGTAQEESILAMARTCKAQGKATLTVKSYADQASATIALVNKQVDLMYTDTP--V 219

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A            +L      +P+   I + + +    V      ++ + 
Sbjct: 220 AAYAVKQTDGALQLLGRPQEVAPMGIVIAKDNMKLTKAVQAALQKLIDSG 269


>gi|219666811|ref|YP_002457246.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Desulfitobacterium hafniense DCB-2]
 gi|219537071|gb|ACL18810.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 295

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 85/264 (32%), Gaps = 21/264 (7%)

Query: 7   VSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           V +L   +       T         S L   K++G +  G       +A   A+G   G 
Sbjct: 12  VGVLAFSVFALGGCGTTETKGGDGMSTLEKAKEKGSVTVG-FANEKPYAYKTADGKLTGE 70

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V+  RA+   +  +  + +            LQ+K+ D+++     T  R     ++F 
Sbjct: 71  AVEIARAVLKELGINDMQGEL--TEFASLIPGLQAKRFDMVTAGMFITPERAE--QVSFA 126

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+   + K     + S   ++       A     +       +   K   +   
Sbjct: 127 NPEYSIGEAIAVKKGNPLDLHSYEDIAKHGTAKVAVPGGAIEYDYLVASGVPKDRIVTVP 186

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-------KSPLAPAI 230
            +    AA +A R D  T    ++ A   T + P+   ++            +   A A 
Sbjct: 187 DMPAALAALQAGRTDVITATGPSIQATLDTANDPNLERVMDFTQPVIDGESVRGYGATAF 246

Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254
              D+++    +     +  + EL
Sbjct: 247 RHEDSDFREAFNAELQKLKESGEL 270


>gi|115350156|ref|YP_771995.1| prephenate dehydratase [Burkholderia ambifaria AMMD]
 gi|115280144|gb|ABI85661.1| cyclohexadienyl dehydratase [Burkholderia ambifaria AMMD]
          Length = 270

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 76/241 (31%), Gaps = 15/241 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S L D+  RG L+         ++  + +G ++G D+D   +L+ ++      ++   
Sbjct: 37  AGSRLDDVLARGTLRVCTTGDYKPYSYYRTDGRFEGIDIDMAESLAKSLGVKAQFVKTSW 96

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS- 141
            N    F+A    + DI       TL R+    + F      DG+  I          + 
Sbjct: 97  SNLTNDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTAIARCADADKYQTV 150

Query: 142 ---QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
                    + V  G T E     +F   N      V+     I     A + D    D 
Sbjct: 151 AQIDRPETRVIVNPGGTNERFAKQFFTHAN----LTVYPDNVTIFKQILAGKADVMVTDA 206

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S    L+   +     V           A  + +GD  +   V    +  +++ E     
Sbjct: 207 SETM-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVAFQQYVDQWLHLALSSGEYQSIS 265

Query: 259 K 259
            
Sbjct: 266 D 266


>gi|323489529|ref|ZP_08094756.1| YckB [Planococcus donghaensis MPA1U2]
 gi|323396660|gb|EGA89479.1| YckB [Planococcus donghaensis MPA1U2]
          Length = 282

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 80/257 (31%), Gaps = 15/257 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKA-N 53
            K   V+   +  L     S   S          +I++ G L    +  L+  +   A +
Sbjct: 7   KKKTLVTTGAISALLLAGCSNEESNKEETKTAWDEIQEEGSLTVATSGTLLATSFRDAES 66

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GF+V+  R L   +  D   I++  L   E   ++ + QID+ + + + T  R   
Sbjct: 67  DELTGFEVEVVRELGERLNLD---IEFKELGFDEMLTSVNTGQIDLAANDIEITEDRAEE 123

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              +      +           GISS+  L G      + +       +  + +  +   
Sbjct: 124 FIFSTPIKYSYGTAVVRKDDLSGISSLEDLPGKKAAGASTSIYM----EIAREYGAEEVT 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                 E         R D    D              +  +      + S +   + + 
Sbjct: 180 YDNASNEVYLRDVSIGRTDVILNDFYLSTFGVAAFPDLNITIHPDIKYAPSEVGLVMNKD 239

Query: 234 DTEWYNIVSWTHYAMVT 250
           + E    V+ T  AM+ 
Sbjct: 240 NKELAENVNKTLEAMLE 256


>gi|311107901|ref|YP_003980754.1| extracellular solute-binding protein, family 3 family protein 7
           [Achromobacter xylosoxidans A8]
 gi|310762590|gb|ADP18039.1| bacterial extracellular solute-binding protein, family 3 family
           protein 7 [Achromobacter xylosoxidans A8]
          Length = 263

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 13/210 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A  LGDI KRG L+  + T     + +   G   G  V+  + ++  +        Y  
Sbjct: 25  QADELGDILKRGELRVAVQTSGPLMSFMDKTGKRTGLAVEVAKRMADDLGVKLVLQDY-- 82

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
              K    AL S + D+++ +   T  R     + F    ++     ++ K     S  +
Sbjct: 83  -EWKGLIPALLSGKADMVAADMTPTPQRAA--QVLFSTPMFYADTVAVVPKDSPYKSYEE 139

Query: 143 LS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           L+  G ++ V   +T             MK        V +      + R DA    +S 
Sbjct: 140 LNKDGVTVGVLGASTYAEVGKKMLPKATMKEFSGGSAPVGQA---LSSGRLDAGIMSLST 196

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                +         +L  I+ + PLA A+
Sbjct: 197 ANQFLVDFGN---LRVLDGIMVREPLAFAV 223


>gi|290581241|ref|YP_003485633.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254998140|dbj|BAH88741.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 517

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 26/211 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------- 53
           M K     +  L +LF    +  A          +L+ G+      F   + N       
Sbjct: 1   MKKTILSCLAALFMLFIGVTNAQAD--------NYLRVGMEAAYAPFNWTQDNSSNGAVP 52

Query: 54  --GDWK---GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             G  +   G+DV   + ++ A+   P  ++      +    AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQTAKKIAKALGKKPLIVK---TKWEGLVPALTSGKIDLIIAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +    L+  S      +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLVVRKDSKYAKAKNLNDFSGAKVT-SQQGVYLYNLINQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                       ++  A  ++  DAY  +  
Sbjct: 167 KVSRQTAMGDFSQMRQALASNVIDAYVSERP 197


>gi|56413210|ref|YP_150285.1| hypothetical protein SPA1000 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362136|ref|YP_002141773.1| hypothetical protein SSPA0932 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56127467|gb|AAV76973.1| hypothetical protein SPA1000 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093613|emb|CAR59079.1| hypothetical protein SSPA0932 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 256

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 76/250 (30%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+ ++ L +      S  A    +IK+   L+ G+       A         GFD
Sbjct: 1   MKKVYFMFVILLSL--SGIHSAMAKPWQEIKESKELRVGVPGDYAPLAFHNKQNKLIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I ++P +       L + + DI       T  R     L+   
Sbjct: 59  IDMAYSLGKAL---HLNILFVPSSWPTLSTDLTADKFDIAMGGITETPGRRKQFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +          ++     S+  +   G  I V  G T    +  + +        I  + 
Sbjct: 116 LKNGKIALTQCNRINDFKSLEDIDRKGVRIVVNPGGTNLDYVDKHIR----YADVIREKD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQG 233
            +      R    D    D   L      N  P         ILPD          + + 
Sbjct: 172 NDATLQRIRERSADVMFTD--LLEGTYYQNKEPGVFCVSTRSILPDTAGNKVY--MMAKD 227

Query: 234 DTEWYNIVSW 243
           +    + V+ 
Sbjct: 228 NQYLLDAVNS 237


>gi|87119147|ref|ZP_01075045.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Marinomonas sp. MED121]
 gi|86165538|gb|EAQ66805.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Marinomonas sp. MED121]
          Length = 304

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 22/256 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-------EVKANG---- 54
            +S++ +  +F       A  L +IK+RG +  G+ T    +A            G    
Sbjct: 27  LISLVFICAIFVLCSQLEAQALDNIKQRGEIIIGVKTDYPPYAHLLTIDNLKTDKGRATQ 86

Query: 55  --DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G ++D  + ++  +      ++ + + +  R   + +K++DIL         R  
Sbjct: 87  AQTHVGLEIDLAQNIADRLGVK---LRLVSVKSSNRMQFIVAKEVDILIATLSDRKER-R 142

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +     P  Y  G   +  K   ++   QL    +C   G      +   F A      
Sbjct: 143 KVVNMVEPAYYASGTNLLAWKSAKLNYWEQLHKKKVCGLKGAFYNHAIKMDFGAK----- 197

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I FE  ++   A R  +C A+  D S +              +  + I  +P + AI  
Sbjct: 198 LISFETTDQALLALRQGQCLAFVYDDSFISHTLFDQRWQKHFEMPLNSIKNTPWSIAIHH 257

Query: 233 GDTEWYNIVSWTHYAM 248
            +  +  ++       
Sbjct: 258 DEEAFKEVLKEMVIDW 273


>gi|251789069|ref|YP_003003790.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247537690|gb|ACT06311.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 258

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 13/218 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    A G  +GFD+D   A+  A         ++  +      ALQ+
Sbjct: 24  ELRFGLEAEYPPFESRNAKGQLEGFDIDLGNAICKA---GNFTCSWVEASFDALIPALQA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153
           K+ D ++   + T  R+    + F    Y      +     G++  +  L G +I V  G
Sbjct: 81  KKFDAINSAMNITEKRKE--AIDFTQPIYRIPTQLVGKPNTGLAPTTDALKGKNIGVLQG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E+    +++          ++          A R D      +A  +  L       
Sbjct: 139 SIQEVYAKAHWEPKG--VTVTSYKDQNLAYDDLAAGRLDGTLVMAAAGQSGFLDKPEGKG 196

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHY 246
              +   +  +      +   + +GD      +     
Sbjct: 197 FAFIGGPVEDTAILGSGIGFGLRKGDAALKAELDKAIK 234


>gi|269954898|ref|YP_003324687.1| extracellular solute-binding protein family 3 protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269303579|gb|ACZ29129.1| extracellular solute-binding protein family 3 [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 298

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 69/225 (30%), Gaps = 9/225 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +   + + G L  G +        V  +G    GFD+D  RA+++ +     ++   
Sbjct: 50  AALVPAAVAEDGKLTVGSDLTYAPAEFVDTDGKTAVGFDIDIIRAVANVLG---LELDVQ 106

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                    A+ + + ++   +   T  R     ++F           +           
Sbjct: 107 SATFDSIIPAVGT-RYEVGVSSFTITPER--LDAVSFVSYFDAGSLFAVAEGNPDGIDPE 163

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L GA++ VQ GT     L    +  +     + FE   ++ +     R  A   D    
Sbjct: 164 NLCGATVSVQTGTIQLDALNAANETCDEPIKLLTFESQADVTSNLVNGRAQAMYADSP-- 221

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                         +L +I   +P    I + D E    +     
Sbjct: 222 VTGYAVLRADGAIELLGEIHDSAPYGIVIPKDDLELGEALRAALQ 266


>gi|157691100|ref|YP_001485562.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157679858|gb|ABV61002.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus SAFR-032]
          Length = 290

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 78/258 (30%), Gaps = 20/258 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVK---A 52
              + + ++   IL  ++ S + S          I+K+G +    +  L   +       
Sbjct: 8   KSIWVMLVVSAFILVLSACSQSGSSQSGDSKWDKIQKKGKIVVATSGTLYPTSYHDTANG 67

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G++V+  +     +     K+++  +       A+ S Q+D  + + D T   + 
Sbjct: 68  KDQLTGYEVEVVKEAFKRL---DVKVEFKEMGYDGMLSAINSGQVDAAANDIDITD--DR 122

Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
               AF     +     I+ K    GI ++  L G      A T       D  + +  K
Sbjct: 123 KDKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTIYM----DVARKYGAK 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                    E+        R D    D            + +  +        +     +
Sbjct: 179 EVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPKLNITIHPDLKYMPNEQGFVM 238

Query: 231 IQGDTEWYNIVSWTHYAM 248
            + +TE    ++     M
Sbjct: 239 KKDNTELQKELNGVLKDM 256


>gi|150377308|ref|YP_001313903.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150031855|gb|ABR63970.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 313

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 90/277 (32%), Gaps = 27/277 (9%)

Query: 3   KDFFVSILCLIILFFTS-FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +      L L  +  +   +  A  L  ++    +K G +     F+         G+ V
Sbjct: 13  RRIVRFGLTLGAVTVSMWATAEAQTLDRVRSSSTVKLGYDATARPFSFKAEGESATGYAV 72

Query: 62  DFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
             C  ++      +      ++++ L       A++    D+    +  TL R     ++
Sbjct: 73  SLCMEVTEELKRELGIADLAVEWIELTRDAADNAIRQGSADLFCGASPVTLTRRK--EVS 130

Query: 118 FRPITYFDGQGFIMHKKKGI--------------------SSVSQLSGASICVQAGTTTE 157
           F    +  G G ++     +                     + + L+  +    AGTT+E
Sbjct: 131 FSIPIFPSGTGAVLSASAPLALREVLTQGRPSDRPIWRGSPARTVLNQKTFSPIAGTTSE 190

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             LA+  K   +       E  ++  A       D   GD+  L       +   + ++L
Sbjct: 191 DWLAERIKTFQLSATIAAVENYDQGIANILNGESDVLFGDLPLLLDAAARGENSGDLIVL 250

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
               +  PLA  + + D ++  +V         +E+ 
Sbjct: 251 KRHFTYEPLALVLARNDEDFRIVVDRALSRTYRSEDF 287


>gi|46190857|ref|ZP_00121018.2| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bifidobacterium longum
           DJO10A]
          Length = 295

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 48  DSVAGDGTLTVGADTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 104

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 105 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 161

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + + D +  D     
Sbjct: 162 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSSKLQTDVTTAVASGKADIFYADTP--V 219

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           A             L + +  +P A A+ +GD++    V     
Sbjct: 220 AGYAIKQTGDTLEALGEDVGVTPEAVAVKKGDSKTAEAVQKAIQ 263


>gi|161614392|ref|YP_001588357.1| hypothetical protein SPAB_02141 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161614457|ref|YP_001588422.1| hypothetical protein SPAB_02206 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161363756|gb|ABX67524.1| hypothetical protein SPAB_02141 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161363821|gb|ABX67589.1| hypothetical protein SPAB_02206 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 256

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 77/250 (30%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+ ++ L +      S  A    +IK+   L+ G+       A         GFD
Sbjct: 1   MKKVYFMFVILLSL--SGIHSAMAKPWQEIKESKELRVGVPGDYAPLAFHNRQNKLIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I ++P +       L + + DI       T  R     L+   
Sbjct: 59  IDMAYSLGKAL---HLNILFVPSSWPTLSTDLAADKFDIAMGGITETPGRRKQFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +          ++     S+  +   G  I V  G T +  +  + +        I  + 
Sbjct: 116 LKNGKIALTQCNRINDFKSLEDIDRKGVRIVVNPGGTNQDYVDKHIR----YADVIREKD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQG 233
            +      R    D    D   L      N  P         ILPD          + + 
Sbjct: 172 NDATLQRIRERSADVMFTD--LLEGNYYQNKEPGVFCVSTRSILPDTAGNKVY--MMAKD 227

Query: 234 DTEWYNIVSW 243
           +    + V+ 
Sbjct: 228 NQYLLDAVNS 237


>gi|226362676|ref|YP_002780454.1| ABC transporter substrate-binding/permease protein [Rhodococcus
           opacus B4]
 gi|226241161|dbj|BAH51509.1| putative ABC transporter substrate-binding/permease protein
           [Rhodococcus opacus B4]
          Length = 603

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/260 (11%), Positives = 77/260 (29%), Gaps = 27/260 (10%)

Query: 7   VSILCLIILFFTSFSTNASI---------LGDIKKR-------GFLKCGINTGLVGFAEV 50
           V           +    A           L  I          G L  G  +       V
Sbjct: 48  VGAATAAPTNLAASGAAAEDRYTTPTTTPLDQIDTSKLNLITPGVLTVGTLSDAPPSICV 107

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            ++  + G+D +  RA++  +     ++ ++          +  ++ D+   ++  T   
Sbjct: 108 NSDNQFTGYDNELLRAVADKLG---LRVDFVGTEFAGLLAQVAGRRFDV--GSSSITTTD 162

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           E    + F     F     ++     I S   L+ ++       T    + D +  + +K
Sbjct: 163 ERRNTVGFTNGYDFGYFSLVVPNGGPIQSFDDLNASTRIGVVQGT----VQDDYVVNTLK 218

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
            +P+ F       A  +  + DA+                    ++       + +  A+
Sbjct: 219 LNPVKFPDYATAYANLKTGQIDAWVAPSQQAEG--AIAPGDPTSIVENTFSVNNYVGWAV 276

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            + +    + ++    A++ 
Sbjct: 277 NKENQPLVDALNSGLDAVIA 296


>gi|242556607|pdb|3H7M|A Chain A, Crystal Structure Of A Histidine Kinase Sensor Domain With
           Similarity To Periplasmic Binding Proteins
          Length = 234

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 68/205 (33%), Gaps = 12/205 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  +  NG   G++V+  RA++  +      +++      E F AL+S
Sbjct: 12  TIVVGGDRDYPPYEFIDQNGKPAGYNVELTRAIAEVMG---MTVEFRLGAWSEMFSALKS 68

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            ++D+L      +   + +  + F P            +     + +  L G  + +   
Sbjct: 69  GRVDVLQG---ISWSEKRARQIDFTPPHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRD 125

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 LA+           ++     +      A  CD Y           +  +R + 
Sbjct: 126 GIMHEYLAE----RGYGKDLVLTPTPADALRLLAAGGCD-YAVVAMVPGMYIIRENRLTN 180

Query: 214 HVILPDIISKSPLAPAIIQGDTEWY 238
            V +   I+      A+ QGD E  
Sbjct: 181 LVPVARSIAAQRYGYAVRQGDAELL 205


>gi|330816515|ref|YP_004360220.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
 gi|327368908|gb|AEA60264.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
          Length = 275

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 9/217 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G++     ++ V  NG   GFDV+  RA+ + +     ++++   +       + 
Sbjct: 38  GKLIAGVDANNKPYSYVD-NGKMTGFDVELLRAIGARLG---LQVEFRAQDFAGMLPGVA 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           ++Q+D+ + +   T  R     + F                  IS+              
Sbjct: 94  NRQLDVAAGSISITTDRLKM--VDFSEGYLTGLLSVATLPGSAISADVASVKGKRIGVVQ 151

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            T E T AD +         + F  +       R+   D Y  D +    L+    + + 
Sbjct: 152 GTIEDTYADTYI---PGAQVVRFPNLNAGFLQLRSKYIDGYFIDKTLAVGLQAKYPQLNL 208

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              L       P    + +G+++    ++ +  A+V 
Sbjct: 209 QDKLDISAVNLPAGFPLRKGNSKLAAALNKSIDALVA 245


>gi|222081596|ref|YP_002540960.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726275|gb|ACM29364.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 263

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 13/238 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L+         F+    +G   G ++   + ++  +    + +           + LQ
Sbjct: 34  GKLQVATEGTFAPFSMRAPDGSLDGLEIRVMKEVAKRLDLAYTPVLIK---WDSLLVGLQ 90

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + Q D++S + D T  R+    + F       G   I+ K   I S + L G ++     
Sbjct: 91  ADQYDVISASMDITPERQK--KVTFANGWLESGGRIIVSKGSPIKSAADLKGKTVGALVS 148

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T      +             ++   +          DA   D  A          P E
Sbjct: 149 STFAKIAEE------KGAVVKGYKAEADAMQDLVNGNIDATITDSIAGAYAVKNAHMPLE 202

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
             +  D +S      AI +G  E    ++     MV          ++        +P
Sbjct: 203 --MTDDYVSHIQKGFAIKKGKPELVKAINKALADMVADGTYAKLTTDLVGFDPAPKDP 258


>gi|148828332|ref|YP_001293085.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittGG]
 gi|148719574|gb|ABR00702.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittGG]
          Length = 239

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 81/257 (31%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAASAQ--------------ELTFAMQPSYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVTNAICQEI---QATCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + L  +       +     +       + L  A+ + + +  
Sbjct: 154 NAILDLKSGRIDIIFGDTAVLADIISKEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKDLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 AKLNKGLAAIKANGEYQ 230


>gi|146321731|ref|YP_001201442.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis 98HAH33]
 gi|253752541|ref|YP_003025682.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis SC84]
 gi|253754367|ref|YP_003027508.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|253756301|ref|YP_003029441.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|145692537|gb|ABP93042.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis 98HAH33]
 gi|251816830|emb|CAZ52475.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis SC84]
 gi|251818765|emb|CAZ56603.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|251820613|emb|CAR47371.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|292559150|gb|ADE32151.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis GZ1]
 gi|319758952|gb|ADV70894.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis JS14]
          Length = 521

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 87/271 (32%), Gaps = 37/271 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M +   + +L LI +F  +          ++   +L+ G+      F       +     
Sbjct: 1   MKRKLSIFLLTLIAVFSVTTG--------VRADEYLRVGMEAAYAPFNWTQEDDSNSAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + +++++  +   ++      +    AL S +ID++      T 
Sbjct: 53  IEGTNQFANGYDVQVAKKIAASMDKELLVVK---TKWEGLVPALTSGKIDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+  +   F    Y      ++         +S+   +GA I  Q G      +     
Sbjct: 110 ERKKEIA--FSDSYYTSIPTLVVRSDSQYANATSLEDFAGAKITAQQGVYLYDLIDQIEG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A+             +I  A  +   DAY  +       +  N       +     + + 
Sbjct: 168 ANKQT----AMGDFSQIRQALESGIIDAYVSERPEGRTAEAANKAFKMVELADSFETNAE 223

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              +A  + + D E    V+    A ++ EE
Sbjct: 224 DVTIAVGMRK-DDERIAQVNEVL-ATISEEE 252


>gi|126667699|ref|ZP_01738667.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Marinobacter sp. ELB17]
 gi|126627802|gb|EAZ98431.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Marinobacter sp. ELB17]
          Length = 267

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 75/234 (32%), Gaps = 14/234 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            T A  L +I+     +   +     F+ V   G+  G DVD   AL++ +  +   +  
Sbjct: 28  PTQARELDEIR-NDVFQVVNSGAYPPFSYVDTQGNLVGLDVDIAEALAAKMGVE---VNV 83

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISS 139
                     A+   + D    +   T  R     + F    Y  G   ++      I+S
Sbjct: 84  QSSPWNGIIAAMVGGRFDACICSMSDTEERRK--AIDFSDSYYSAGLSVWVQGSTDDINS 141

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI- 198
           +   +G ++    G T      +  +    K+    F+ +  +       R D    D  
Sbjct: 142 IDDFAGKTVGSTLGETGNQWAVENGE---GKWRNQTFQGLPSMMTGLTTGRIDLMIADDV 198

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             L A++          +        P A ++ +   E    ++    A + A+
Sbjct: 199 PVLVAMQENAPDIKMIDVGELPRW--PAAISVQKNKPELLEALNVAL-AEIKAD 249


>gi|118473096|ref|YP_887746.1| cyclohexadienyl dehydratase [Mycobacterium smegmatis str. MC2 155]
 gi|118174383|gb|ABK75279.1| cyclohexadienyl dehydratase [Mycobacterium smegmatis str. MC2 155]
          Length = 268

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 66/243 (27%), Gaps = 11/243 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            +S+  L     +  + + S L  I +   L+         F      G W G D+D   
Sbjct: 13  LLSLSTLAAGCTSGPTPDPSPLRHITESKTLRVCSTGDYRPFTFRDPQGTWSGMDIDLAD 72

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +  +   I  +          L + + DI       TL R      +   +    
Sbjct: 73  DMARRLGVE---IDMVQTTWANLVGDL-NDRCDIAMGGISITLKRAQEAVYSAPYLRDGK 128

Query: 126 GQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                        S+  +   G  + V  G T E    ++ K +  +   I       I 
Sbjct: 129 AAIVRCADASRFRSLQDIDRPGTRVVVNPGGTNE----EFAKGNLKQATIIDHPDNNTIF 184

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               A   DA   D S +       DR    V      +    A  +     +    V  
Sbjct: 185 GEISAGHADAMITDASEIRFQTAQ-DRTLCGVSTDRPFTFEQKAYLLPAAAIDTARWVDE 243

Query: 244 THY 246
              
Sbjct: 244 WLN 246


>gi|209515773|ref|ZP_03264636.1| Prephenate dehydratase [Burkholderia sp. H160]
 gi|209503800|gb|EEA03793.1| Prephenate dehydratase [Burkholderia sp. H160]
          Length = 263

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 72/239 (30%), Gaps = 15/239 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L DI  RG L+         ++  K +G ++G D+D   +L+ ++      ++    N
Sbjct: 32  SRLDDIISRGTLRACTTGDYKPYSFYKGDGQFEGIDIDMAESLAKSLGVKLEFVKTSWSN 91

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK----GISSV 140
               F+A    + DI       TL R+      F      DG+  I            + 
Sbjct: 92  LINDFVA----KCDIGIGGVSPTLERQKH--AFFTQAYMIDGKTPIARCDDVNKYQTIAQ 145

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  + V  G T E     YF   N      V+     I     A + D    D S 
Sbjct: 146 IDQPSTRVIVNPGGTNEKFAKQYFPHAN----VTVYPDNVTIFKQILAGKADVMVTDASE 201

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              L+   +     V           A  + +GD  +   V    +      E      
Sbjct: 202 TL-LQQKLNPGLCSVHPDKPFQYGEKAWLLPRGDVAFQQYVDQWLHLARATGEYQTVSD 259


>gi|293391345|ref|ZP_06635679.1| arginine-binding periplasmic protein 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951879|gb|EFE01998.1| arginine-binding periplasmic protein 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 239

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 77/257 (29%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I     L  ++   NA           L   +      F      G+  GFD
Sbjct: 1   MKKLLLSAI-----LLGSAVVANAQD---------LTFAMEPSYPPFEFTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +           L+SK+ D      D T  R     + F  
Sbjct: 47  VDIANAICKEI---QATCHFKGEAFDSLITNLRSKRFDAAISAMDITEARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     ++ VQ GTT +       K    +Y    +  ++
Sbjct: 102 PYYDSTASYVALKGKATLDSA----KNVGVQNGTTFQQYTVAETK----QYASKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +     +  R D   GD + L  +       +     +       + L  A+ + +    
Sbjct: 154 DAILDLKNGRIDIIFGDTAVLADMISKEAEIQFVGDKVTNKKYFGNGLGIAMNKSNKTLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++    A+    E  
Sbjct: 214 ESLNKGLAAIKANGEYQ 230


>gi|224583630|ref|YP_002637428.1| hypothetical protein SPC_1849 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224468157|gb|ACN45987.1| hypothetical protein SPC_1849 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|320085601|emb|CBY95380.1| probable extracellular solute-binding protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 256

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 76/250 (30%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+ ++ L +      S  A    +IK+   L+ G+       A         GFD
Sbjct: 1   MKKVYFMFVILLSL--SGIHSAMAKPWQEIKESKELRVGVPGDYAPLAFHNKQNKLIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I ++P +       L + + DI       T  R     L+   
Sbjct: 59  IDMAYSLGKAL---HLNILFVPSSWPTLSTDLAADKFDIAMGGITETPGRRKQFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +          ++     S+  +   G  I V  G T    +  + +        I  + 
Sbjct: 116 LKNGKIALTQCNRINDFKSLEDIDRKGVRIVVNPGGTNLDYVDKHIR----YADVIREKD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQG 233
            +      R    D    D   L      N  P         ILPD          + + 
Sbjct: 172 NDATLQRIRERSADVMFTD--LLEGTYYQNKEPGVFCVSTRSILPDTAGNKVY--MMAKD 227

Query: 234 DTEWYNIVSW 243
           +    + V+ 
Sbjct: 228 NQYLLDAVNS 237


>gi|116051494|ref|YP_789672.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586715|gb|ABJ12730.1| cyclohexadienyl dehydratase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 268

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 72/246 (29%), Gaps = 18/246 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I + G L+         F+     G + GFDVD  + L+ ++      +     +
Sbjct: 28  SRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVP---TS 84

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----HKKKGISSV 140
                      + DI        L R+      F      DG+  I       +      
Sbjct: 85  WPNLMRDFADDRFDIAMSGISINLERQR--QAYFSIPYLRDGKTPITLCSEEARFQTLEQ 142

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
               G +  V  G T E     + +A+  +   +V      I       + D    D   
Sbjct: 143 IDQPGVTAIVNPGGTNE----KFARANLKEARILVHPDNVTIFQQIVDGKADLMMTDA-I 197

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
              L+         V        +  A  + + +  +   V    +    AE+ G+ ++ 
Sbjct: 198 EARLQSRLHPELCAVHPQQPFDFAEKAYLLPRDE-AFKRYVDQWLH---IAEQSGLLRQR 253

Query: 261 INQVSK 266
           +    +
Sbjct: 254 MEHWLE 259


>gi|303246647|ref|ZP_07332925.1| integral membrane sensor signal transduction histidine kinase
           [Desulfovibrio fructosovorans JJ]
 gi|302491987|gb|EFL51865.1| integral membrane sensor signal transduction histidine kinase
           [Desulfovibrio fructosovorans JJ]
          Length = 581

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 16/243 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGF---LKCGINTGLVGFAEVKANGD 55
           M +  F   +        +    A   + G+ K  G    ++ G +     +  +  +G 
Sbjct: 5   MLRFAFALSILSCAALGVALDARAVDGLYGNSKMPGIGRPVRVGGDRDYPPYEFLDKDGK 64

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GF+VD  RA++  +     K+++          AL    +DIL      T   E +  
Sbjct: 65  PAGFNVDLTRAVAEVMG---MKVEFRLGAWAGEREALMDGGLDILEG---MTYSDERAQI 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L F P T  +   F       +SS+  L+G  + V         + D   A  M+   I 
Sbjct: 119 LDFAPHTIVNHAIFARRGAPPVSSLDDLAGKKVIVHR----AGFMHDTLAAKGMEKDLIF 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E   +      +   D Y           +  ++      +   ++      A  +G+ 
Sbjct: 175 SETPADGLRLLASGVGD-YAVVAMLPGISIIRENKLDNIQPVARSVATVRYGYATRKGND 233

Query: 236 EWY 238
              
Sbjct: 234 ALL 236


>gi|161613584|ref|YP_001587549.1| hypothetical protein SPAB_01306 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362948|gb|ABX66716.1| hypothetical protein SPAB_01306 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 256

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 76/250 (30%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+ ++ L +      S  A    +IK+   L+ G+       A         GFD
Sbjct: 1   MKKVYFMFVILLSL--SGIHSAMAKPWQEIKESKELRVGVPGDYAPLAFHNKQNKLIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I ++P +       L + + DI       T  R     L+   
Sbjct: 59  IDMAYSLGKAL---HLNILFVPSSWPTLSTDLAADKFDIAMGGITETPGRRKQFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +          ++     S+  +   G  I V  G T    +  + +        I  + 
Sbjct: 116 LKNGKIALTQCNRINDFKSLEDIDRKGVRIVVNPGGTNLDYVDKHIR----YADVIREKD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQG 233
            +      R    D    D   L      N  P         ILPD          + + 
Sbjct: 172 NDATLQRIRERSADVMFTD--LLEGTYYQNKEPGVFCVSTRSILPDTAGNKVY--MMAKD 227

Query: 234 DTEWYNIVSW 243
           +    + V+ 
Sbjct: 228 NQYLLDAVNS 237


>gi|312976992|ref|ZP_07788741.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Lactobacillus crispatus
           CTV-05]
 gi|310896320|gb|EFQ45385.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Lactobacillus crispatus
           CTV-05]
          Length = 537

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 85/300 (28%), Gaps = 32/300 (10%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M    +   V +  L+ LF     ++       K  G LK G+      +          
Sbjct: 1   MKSRFRWMAVIMSVLLSLFIGFSLSSNQTQAAKKDSGTLKIGMEANYPPYNWTQPTKANG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVPIDDSNSYANGYDVQIAKIIGKRLHKK---VIVEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      ++   GA +  Q GT     +  
Sbjct: 118 PTAERRK--AINFSAPYRKSTFVVITNKASKYSNAKKLTDFKGAKLTAQQGTLHYDLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVIL 217
              A               +  +  +   D Y  +     +    N        ++    
Sbjct: 176 LKGAK----RETAMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMAGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKRDQLMSQAIKEQPKAGNETKKENWL 291


>gi|148984000|ref|ZP_01817319.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|147924147|gb|EDK75259.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|301799665|emb|CBW32225.1| putative extracellular solute-binding protein [Streptococcus
           pneumoniae OXC141]
          Length = 266

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|149002302|ref|ZP_01827244.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP14-BS69]
 gi|147759617|gb|EDK66608.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP14-BS69]
          Length = 266

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|126668661|ref|ZP_01739612.1| cystine-binding protein [Marinobacter sp. ELB17]
 gi|126626839|gb|EAZ97485.1| cystine-binding protein [Marinobacter sp. ELB17]
          Length = 276

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 20/199 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++L + +   +        +         + G++     F  V+ + + KGFD
Sbjct: 37  MKTLLINTLLIMCLFASSPLLAQEDPM---------RVGMSGQYFPFTFVEQD-ELKGFD 86

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   +  +   I +   N    F  L+  +ID ++     T  R+      F  
Sbjct: 87  VDIMNAVGKEMGRE---ITFQTANFSGLFGMLEFGRIDTVANQITITEDRKK--AYIFSE 141

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   ++ K    +  V  L G ++ V  G+  E  L +   A   + +   +E  
Sbjct: 142 PYVYGGAQVVVKKGNSEVQGVEDLKGKTVAVNLGSNFEALLRELPYA--DQINIKTYESN 199

Query: 180 EEIDAAYRAHRCDAYTGDI 198
            E   A    R DA+  D 
Sbjct: 200 IERHTAL--GRVDAFVMDR 216


>gi|166154591|ref|YP_001654709.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           434/Bu]
 gi|166155466|ref|YP_001653721.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335858|ref|ZP_07224102.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           L2tet1]
 gi|165930579|emb|CAP04076.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           434/Bu]
 gi|165931454|emb|CAP07030.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 257

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 67/246 (27%), Gaps = 14/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +   +  +     T                    G N     F  V   G+  GFD+
Sbjct: 6   KKTWIAFLAVVCSFCLTGCLKEGGD----SNSEKFIVGTNATYPPFEFVDKRGEVVGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +S+ +       ++   +     L L+  +ID +      T  R   + +     
Sbjct: 62  DLAREISNKLGKTLDVREF---SFDALILNLKQHRIDAVITGMSITPSRLKEILMI-PYY 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   ++ K +    +      S+ VQ GT  E  L         + H   F+   E
Sbjct: 118 GEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQEAYLQSL-----SEVHIRSFDSTLE 172

Query: 182 IDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +       +   A      A   LK +    +  + LP+          +          
Sbjct: 173 VLMEVMHGKSPVAVLEPSIAQVVLKDSPALSTATIDLPEDQWVLGYGIGVASDRPALALE 232

Query: 241 VSWTHY 246
           +     
Sbjct: 233 IEAAVQ 238


>gi|30721658|gb|AAP34260.1| GlnH [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 246

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 11/206 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G+  G   F      G   G  VDF  A +         +    +       AL++ 
Sbjct: 11  LVVGMELGYPPFEMSDKTGKASGISVDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTA 67

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAG 153
           +ID++  +   T  R+    + F           +      I+++  L   G  + ++ G
Sbjct: 68  KIDLIMSSMTITDERKKV--VDFSIPYAKANLAILTPLNSDITNIKDLDKKGKVLALKRG 125

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T  L      K         +F++           + D +  D   +Y     +   + 
Sbjct: 126 STGHLYAVKNLK----NATINLFDKENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTR 181

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYN 239
            +++P   +      A+ +G+ E   
Sbjct: 182 AILVPFQENPEFWGIAVQKGNAELKK 207


>gi|257487306|ref|ZP_05641347.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 263

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 82/262 (31%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + +   L++          S   L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKYSAFTALLLGMTGMAQAQESTSHLDKVLQAGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCEDKAMYETVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTAYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W + V    +      E  
Sbjct: 229 DVTWKSYVDQWLHLSKATGEYQ 250


>gi|163789522|ref|ZP_02183960.1| glutamine ABC transporter, permease/substrate-binding protein
           [Carnobacterium sp. AT7]
 gi|159875054|gb|EDP69120.1| glutamine ABC transporter, permease/substrate-binding protein
           [Carnobacterium sp. AT7]
          Length = 484

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 11/200 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               +     F    A GD+ G DV+   A++          +  PL       AL+S Q
Sbjct: 41  VITTDVTYAPFEFKNAEGDYVGIDVETLDAIAED---QNFSYELRPLAFSAGLQALESNQ 97

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTT 155
           +D +      T  R+      F    +  G    +      ISS   L G ++ V+ GTT
Sbjct: 98  VDGMIAAMSITDERKE--SFDFSDPYFEAGTVMAVSKNNDAISSYEDLDGKTVAVKVGTT 155

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               + +             FE    +     +   DA   D   +           +  
Sbjct: 156 GAAFVTEL--KKQFDIDINQFEDSATMYEDVVSGHSDAVFDDYPVMAYAVQQ---GLKLQ 210

Query: 216 ILPDIISKSPLAPAIIQGDT 235
              D  +      A+ +G  
Sbjct: 211 FPLDPEAGDVYGFAVNKGQN 230


>gi|187925860|ref|YP_001897502.1| arogenate dehydratase [Burkholderia phytofirmans PsJN]
 gi|187717054|gb|ACD18278.1| Arogenate dehydratase [Burkholderia phytofirmans PsJN]
          Length = 265

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 78/254 (30%), Gaps = 15/254 (5%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
             +     ++ +   S L +I  RG L+         ++  KA+G ++G D+D   +L+ 
Sbjct: 19  AGVAGAQTSATTATPSRLDEILARGTLRACTTGDYKPYSFYKADGQFEGIDIDMTESLAK 78

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           ++      I+    N    F+A    + D+       TL R+      F      DG+  
Sbjct: 79  SLGVKTEYIKTSWSNLMNDFVA----KCDVGVGGVSPTLERQK--RAFFTQAYMVDGKTP 132

Query: 130 IMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           I+           +        + V  G T E     YF   N      V+     I   
Sbjct: 133 IVRCDDVNKYQTVAQIDQPATRVIVNPGGTNERFAKQYFPHAN----LTVYPDNVTIFKQ 188

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             A + D    D S    L+   +     V           A  + +GD  +   V    
Sbjct: 189 ILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKAWLLPRGDVAFQQYVDQWL 247

Query: 246 YAMVTAEELGITQK 259
           +      E      
Sbjct: 248 HLARATGEYQAISD 261


>gi|71903351|ref|YP_280154.1| cystine-binding protein [Streptococcus pyogenes MGAS6180]
 gi|71802446|gb|AAX71799.1| cystine-binding protein [Streptococcus pyogenes MGAS6180]
          Length = 299

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 37  SQKSSWETIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 93

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +        +  
Sbjct: 94  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMAKK 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 153 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 209

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D     +     + + D      +      M+    L  
Sbjct: 210 AQKLFVDYMLSQNPNLNVKMSDAQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 269

Query: 257 TQKNI 261
             +  
Sbjct: 270 ISETY 274


>gi|149021580|ref|ZP_01835635.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP23-BS72]
 gi|147930276|gb|EDK81261.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP23-BS72]
          Length = 266

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    +  + + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINHWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|257063424|ref|YP_003143096.1| amino acid-binding protein [Slackia heliotrinireducens DSM 20476]
 gi|256791077|gb|ACV21747.1| amino acid-binding protein [Slackia heliotrinireducens DSM 20476]
          Length = 286

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 66/227 (29%), Gaps = 23/227 (10%)

Query: 37  KCGINTGLVGFAEV----------KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             G +     +  +               + GFD+D    + +    +   ++  P++  
Sbjct: 42  IVGFDAEYPPYGYLADPDEEGYVADDGQTYTGFDLDLANEVCAR---NGWTLKVQPIDWD 98

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            +   L S  I  +     +   RE             + Q  ++     I S+  L+G 
Sbjct: 99  SKDALLGSGDITCIWNGFTY-EGREDQYAW--SEPYMINAQVVVVKADSDIDSLEDLAGK 155

Query: 147 SICVQAGTTTELTLA-----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           ++  QAG+     L+         A                         DA   D+S  
Sbjct: 156 NVITQAGSAALTLLSPDGDYADLAATFNGGAVSTIAAYTTAFMQLEQGTVDAVACDLSI- 214

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            A+   N  P  +  L + +S    A     G  +    V+ T   M
Sbjct: 215 -AISQMNANPDAYKQLDEQLSSEHYAVGFALGQEDMAQTVTDTLKEM 260


>gi|194016045|ref|ZP_03054660.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
 gi|194012400|gb|EDW21967.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
          Length = 290

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 79/258 (30%), Gaps = 20/258 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVK---A 52
              + + ++   IL  ++ S + S         +I+K+G +    +  L   +       
Sbjct: 8   KSIWVMLVVSAFILVLSACSQSGSSQSGDSKWDEIQKKGKIVVATSGTLYPTSYHDTANG 67

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G++V+  +     +     K+++  +       A+ S Q+D  + + D T   + 
Sbjct: 68  KDQLTGYEVEVVKEAFKRL---DVKVEFKEMGYDGMLSAINSGQVDAAANDIDITD--DR 122

Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
               AF     +     I+ K    GI ++  L G      A T       D  + +  K
Sbjct: 123 KDKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTIYM----DVARKYGAK 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                    E+        R D    D            + +  +        +     +
Sbjct: 179 EVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPKLNITIHPDLKYMPNEQGFVM 238

Query: 231 IQGDTEWYNIVSWTHYAM 248
            + +TE    ++     M
Sbjct: 239 KKDNTELQKELNRVLKEM 256


>gi|330833503|ref|YP_004402328.1| amino acid ABC transporter amino acid-binding protein/permease
           [Streptococcus suis ST3]
 gi|329307726|gb|AEB82142.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis ST3]
          Length = 521

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 88/271 (32%), Gaps = 37/271 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M +   + +L LI +F  +          ++   +L+ G+      F       +NG   
Sbjct: 1   MKRKLSIFLLTLIAVFSVTTG--------VRADEYLRVGMEAAYAPFNWTQEDDSNGAVP 52

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + +++++  +   ++      +    AL S +ID++      T 
Sbjct: 53  IEGTNQFANGYDVQVAKKIAASMDKELLVVK---TKWEGLVPALTSGKIDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R+  +   F    Y      ++         +S++  +GA I  Q G      +     
Sbjct: 110 ERKKEIA--FSDSYYTSIPTLVVRSDSQYANATSLADFAGAKITAQQGVYLYDLIDQIEG 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           A+             +I  A  +   DAY  +       +  N       +     + + 
Sbjct: 168 ANKQT----AMGDFSQIRQALESGIIDAYVSERPEGRTAEAANKAFKMVELADSFETNAE 223

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              +A  + + D     +      A ++ EE
Sbjct: 224 DVTIAVGMRKDDERIAQVNK--VLATISEEE 252


>gi|315442482|ref|YP_004075361.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Mycobacterium sp. Spyr1]
 gi|315260785|gb|ADT97526.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Mycobacterium sp. Spyr1]
          Length = 582

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 79/279 (28%), Gaps = 34/279 (12%)

Query: 2   YKDFFVSILCLIILFFTSFS---------------------TNASILGDIKKRGFLKCGI 40
            K    + +  ++L                             A++  D++  G L  G+
Sbjct: 290 RKGLIAATVAALVLVAAGLGLWIWAPWDRDDDSLPAGAVPEIAATVPADVRAAGRLVIGV 349

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           N          A+G   GFDV+   A+S  +        Y           +     D+ 
Sbjct: 350 NVPYAPMEFKNADGQLVGFDVELMDAVSRVLG---LVSDYRDTAFDTILPGVVDGTYDVG 406

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTE 157
             +   T  RE    + F       G  +       +   S      G +      T   
Sbjct: 407 MSSVTDTKEREEL--VDFV-TYLQAGTQWARRPGTALGPASACGLKVGVAEGTLQATEEL 463

Query: 158 LTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              +D   A  M     +VF+  +E+ +A      DA + D        +   R  + V 
Sbjct: 464 PAKSDQCAAAGMPPIEMVVFKSQDEVTSALVKGEVDAMSADSPVT-GFAIKLSRG-DLVP 521

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             D+   +P    + + ++     +      ++   E  
Sbjct: 522 AGDVFDSAPYGWPVAK-ESGMTEPLQRALEHLMETGEYR 559


>gi|237737015|ref|ZP_04567496.1| histidine-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420877|gb|EEO35924.1| histidine-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 246

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 67/210 (31%), Gaps = 15/210 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59
           M       ++  + L   +          +     + K G       F  +  NG   G+
Sbjct: 1   MKGSVKFLLIGAMALMLGACGGGEK--QTVLDTNRVYKVGTTAEYPPFETL-ENGKIVGY 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD   A++  I        +  +N      ALQ K+IDI+      +  RE    + F 
Sbjct: 58  DVDVIDAVAKKIGIKYE---WKDMNFDGLISALQFKKIDIVIAGISSSPEREKV--VNFS 112

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +     +IM+K     ++ +L G +  V  GT+ E T      A       I F   
Sbjct: 113 IPYHESKTAYIMNKNNP-MTMEELKGKTFGVDLGTSYETTARSIEGAK-----VIAFSST 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND 209
                A ++ + D               N 
Sbjct: 167 GGTLLALKSQKVDCIMVGEVVANEYIEKNP 196


>gi|171317736|ref|ZP_02906918.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171097086|gb|EDT41939.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 267

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 66/205 (32%), Gaps = 21/205 (10%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRA 66
           +   L +L        A           L  GI+      F    A G WKG+++D    
Sbjct: 12  AAAALFVLGLVPAVHAAQP--------TLHVGIDAESYPPFFSKDATGKWKGWEIDL--- 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L +A      + +   +       ALQ+++ID++  +   T  R+    + F    Y   
Sbjct: 61  LDAACGKLNVRCELTDIAWDGLIPALQNRKIDVIWSSMTITGERQK--AIDFSRAYYESP 118

Query: 127 QGFIMHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             F+  K              +G  I V+AGT     L   F+          F++ +  
Sbjct: 119 TVFVGAKSDRRRVDCAVPKSFNGRVIGVEAGTNFSAFLDSRFRQ---DAQIKAFDKFDNA 175

Query: 183 DAAYRAHRCDAYTGDISALYALKLT 207
            A   + R D          A   +
Sbjct: 176 LADLVSGRVDYVQEGKGLFTAFLAS 200


>gi|270291943|ref|ZP_06198158.1| ABC transporter, substrate-binding protein [Streptococcus sp. M143]
 gi|270279471|gb|EFA25313.1| ABC transporter, substrate-binding protein [Streptococcus sp. M143]
          Length = 280

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 83/258 (32%), Gaps = 18/258 (6%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGF-------LKCGINTGLVGFAEVKA 52
           M K   + S+  L ++     +  +         G        +    N     F   + 
Sbjct: 1   MKKIVKYSSLAALGLVAAGVLAACSGGEKKDAASGEATSGKKEIIVATNGSPKPFIY-EE 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G++++  RA+      D   +++        F  L +++ ++   N  +T  R  
Sbjct: 60  NGELTGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDAERYNMAVNNLSYTKER-- 115

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
           +    +      +    ++ K    I S+  + G S  +  GTTT   L +Y K H    
Sbjct: 116 ADKYLYAAPIAQNPNVLVVKKDDNSIKSLDDIGGKSTEIVQGTTTAKQLEEYNKQHTDNP 175

Query: 172 HPIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP- 228
             + +     ++I       + D    D        + N       ++     + P    
Sbjct: 176 TVLNYTKADFQQILTRLSDGQFDYKIFDK-IGVETVIKNQGLDNLKVIELPSDQQPYVYP 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G  E  + V     
Sbjct: 235 LLAKGQDELKSFVDKRIQ 252


>gi|225867904|ref|YP_002743852.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701180|emb|CAW98088.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 281

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 81/247 (32%), Gaps = 16/247 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              +  L +    +  T        K     +          F+  +  G   G+D++  
Sbjct: 9   LAGLAVLSVGMLAACGTKEKSASGTKDTPKEVIFATVGTTAPFSF-EKEGQLTGYDIE-- 65

Query: 65  RALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             ++ A+F D    K+Q+        F  L S +  +   N  +T  R  S+   F    
Sbjct: 66  --VAKAVFKDAEKYKLQFKKTEWSSIFTGLDSGKYQMGGNNISYTKER--SVKYLFSYPI 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ERVE 180
                  ++ K   I S   + G S  V  GTTT   L  + + H      + F  E + 
Sbjct: 122 GATPSVLVVPKDSDIKSYDDIKGHSTQVVQGTTTAAQLKAFNEEHADNPVELKFTNETIT 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWY 238
           ++       + D    D   + A+   +++  EH+   ++ +     +     Q   E  
Sbjct: 182 QMLTNLNEGKADFKIFDAPTVNAII--DNQGLEHLKTIELATSEQPFIYFIFSQDQEELQ 239

Query: 239 NIVSWTH 245
             V+   
Sbjct: 240 AFVNKRL 246


>gi|297748511|gb|ADI51057.1| Arginine-binding protein [Chlamydia trachomatis D-EC]
 gi|297749391|gb|ADI52069.1| Arginine-binding protein [Chlamydia trachomatis D-LC]
          Length = 259

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 65/246 (26%), Gaps = 14/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +   +  +     T                    G N     F  V   G+  GFD+
Sbjct: 8   KKTWIAFLAVVCSFCLTGCLKEGGD----SNSEKFIVGTNATYPPFEFVDKRGEVVGFDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +S+ +       ++   +     L L+  +ID +      T  R   + +     
Sbjct: 64  DLAREISNKLGKTLDVREF---SFDALILNLKQHRIDAVITGMSITPSRLKEILMI-PYY 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   ++ K +    +      S+ VQ GT  E  L         + H   F+   E
Sbjct: 120 GEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQEAYLQSL-----SEVHIRSFDSTLE 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +       +      + S    +        +  + LP+          +          
Sbjct: 175 VLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPEDQWVLGYGIGVASDRPALALK 234

Query: 241 VSWTHY 246
           +     
Sbjct: 235 IEAAVQ 240


>gi|71736313|ref|YP_273487.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|289625225|ref|ZP_06458179.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646722|ref|ZP_06478065.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298485887|ref|ZP_07003963.1| Cyclohexadienyl dehydratase, periplasmic precursor [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71556866|gb|AAZ36077.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159576|gb|EFI00621.1| Cyclohexadienyl dehydratase, periplasmic precursor [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320323016|gb|EFW79106.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329861|gb|EFW85849.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330871353|gb|EGH06062.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330874450|gb|EGH08599.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330988105|gb|EGH86208.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 263

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 82/262 (31%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + +   L++          S   L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKYSAFTALLLGMTGMAQAQESTSHLDKVLQAGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   ++++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VRWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCEDKAMYETVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTAYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W + V    +      E  
Sbjct: 229 DVTWKSYVDQWLHLSKATGEYQ 250


>gi|15605105|ref|NP_219890.1| arginine binding protein [Chlamydia trachomatis D/UW-3/CX]
 gi|255311187|ref|ZP_05353757.1| arginine binding protein [Chlamydia trachomatis 6276]
 gi|255317488|ref|ZP_05358734.1| arginine binding protein [Chlamydia trachomatis 6276s]
 gi|255506964|ref|ZP_05382603.1| arginine binding protein [Chlamydia trachomatis D(s)2923]
 gi|81556585|sp|O84385|ARTJ_CHLTR RecName: Full=Probable ABC transporter arginine-binding protein
           ArtJ; Flags: Precursor
 gi|3328806|gb|AAC67977.1| Arginine Binding Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|296435901|gb|ADH18075.1| arginine binding protein [Chlamydia trachomatis G/9768]
 gi|296436827|gb|ADH18997.1| arginine binding protein [Chlamydia trachomatis G/11222]
 gi|296437761|gb|ADH19922.1| arginine binding protein [Chlamydia trachomatis G/11074]
 gi|297140261|gb|ADH97019.1| arginine binding protein [Chlamydia trachomatis G/9301]
          Length = 257

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 65/246 (26%), Gaps = 14/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +   +  +     T                    G N     F  V   G+  GFD+
Sbjct: 6   KKTWIAFLAVVCSFCLTGCLKEGGD----SNSEKFIVGTNATYPPFEFVDKRGEVVGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +S+ +       ++   +     L L+  +ID +      T  R   + +     
Sbjct: 62  DLAREISNKLGKTLDVREF---SFDALILNLKQHRIDAVITGMSITPSRLKEILMI-PYY 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   ++ K +    +      S+ VQ GT  E  L         + H   F+   E
Sbjct: 118 GEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQEAYLQSL-----SEVHIRSFDSTLE 172

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +       +      + S    +        +  + LP+          +          
Sbjct: 173 VLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPEDQWVLGYGIGVASDRPALALK 232

Query: 241 VSWTHY 246
           +     
Sbjct: 233 IEAAVQ 238


>gi|330821185|ref|YP_004350047.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
 gi|327373180|gb|AEA64535.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
          Length = 265

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 78/256 (30%), Gaps = 25/256 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    SIL   +  FT+    A      +    L    +  L     V A G+  G+D
Sbjct: 1   MKR--LSSILVTWVASFTTLIACA----HAELPKTLHAATSGDLPPVTFVNARGELDGYD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V   R ++  +      +Q   L  K     LQ+ + DI+  N + T  R       +  
Sbjct: 55  VQVARYVAQRVG---IPMQLDKLEFKGILPGLQTGRFDIVFSNINITPERSAV--FDYSI 109

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFER 178
                    +       +     L G  +   AG+   E+   +  +          +  
Sbjct: 110 PYSRSAVVVVARHGVTDVHGFRDLHGKRVGAIAGSNDGEVPAREIERKFGQFAIFKGYGG 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
             E+       R DA     +A   L        +H  + +I+   P         + +G
Sbjct: 170 YAEMFTDLALGRLDAVVAPDNAAANLL------RQHAGVAEIVG-EPYCVRFVGAPMPKG 222

Query: 234 DTEWYNIVSWTHYAMV 249
            TE    V      M+
Sbjct: 223 STELKAKVDAAIREMI 238


>gi|291456220|ref|ZP_06595610.1| ABC-type amino acid transport system, secreted component
           [Bifidobacterium breve DSM 20213]
 gi|291381497|gb|EFE89015.1| ABC-type amino acid transport system, secreted component
           [Bifidobacterium breve DSM 20213]
          Length = 313

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G N        + A+G    G+D+D  RAL +    D   +     N  
Sbjct: 66  ESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARALGNIFGLDTEIVS---SNFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ + + D+       T  R     + F           +        +   L G 
Sbjct: 123 TIIPAIGT-KYDLGIAAFTITKER--MQSVDFVSYFTAGMGYAVAKGNPKNVNPDDLCGL 179

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ V+ GT  E  + +  K               ++  +   A    + D +  D   + 
Sbjct: 180 NVAVETGTVEEDAINETAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSPVVG 239

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   +   L       P A AI +GD++  + V     
Sbjct: 240 YAIAQTE--GQLEQLGKDFDSVPNAIAIKKGDSQTTDAVQKAMQ 281


>gi|257125142|ref|YP_003163256.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
 gi|257049081|gb|ACV38265.1| extracellular solute-binding protein family 3 [Leptotrichia
           buccalis C-1013-b]
          Length = 260

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 82/221 (37%), Gaps = 10/221 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            + +K+  +K G +     F+     +G   G+DV+  + +   I  D   I++  +   
Sbjct: 24  ANARKKRVIKVGTDGVYAPFSFKDESSGKLTGYDVEVIQEVGKRINAD---IEFTTVPWD 80

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSG 145
             FL L+SK+ DI++   + T  RE      F           I+ + +  I ++  L G
Sbjct: 81  SIFLGLESKRYDIIANEIEKTKEREE--KYIFSDKYLVSAAQIIVKEGENNIKTLKDLEG 138

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFE-RVEEIDAAYRAHRCDAYTGDISALYAL 204
             +    G+    T+ +Y K  + K     F+  +          + DA   D   L   
Sbjct: 139 KRVISAVGSNYSKTVEEYNKTASKKIDLNYFDGGITLTLVEIAQGKADATLSDR--LVVS 196

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                +  +  ++ + +S +P      +   E  N V+   
Sbjct: 197 YYKKQQGDKVQLVGEPLSTTPTFFLFRKDSEELRNEVNKAL 237


>gi|150019162|ref|YP_001311416.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905627|gb|ABR36460.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 294

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 94/266 (35%), Gaps = 27/266 (10%)

Query: 2   YKDFFVSILCLIILFFTSFS---------------TNASILGDIKKRGFLKCGINTGLVG 46
            K   V+++ +  + F +                  +   L   K++G L    +     
Sbjct: 6   KKLLVVTMVIMSCIGFMTGCGSGSPSTTSTSAGNDKSKDTLAAAKEKGVLTVASSND-AP 64

Query: 47  FAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           FA + A   ++ G D +    ++  +    +K++   +  +   + L +  +D+++    
Sbjct: 65  FAFMDAKTNEFTGIDAEIITEVAKRLG--INKVEMKQIPFENLLVELNNNTVDMVTDGMY 122

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
               R+      F  I Y +G+  ++ K   I+S   L  A++  Q GT    T A  ++
Sbjct: 123 VKDERKKL--ALFTNIWYKEGEAIVIPKDSKIASKDDLKNATLGGQKGTAFLET-AQKWQ 179

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS- 224
                    VF    E+  A    + DA   D   + A    +   S ++ +        
Sbjct: 180 QDGSVKDVKVFGSQSELMLAVNTGKVDACITD--GMVAGYTLSQDSSLNLKILSPYKAET 237

Query: 225 --PLAPAIIQGDTEWYNIVSWTHYAM 248
              +A A+ + D    + V+     M
Sbjct: 238 SGMIAAAVRKNDKALADAVNEQIDEM 263


>gi|332040227|gb|EGI76607.1| extracellular solute-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 289

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       ILC ++ +   + S +A  +    + G L       + G       G   G+
Sbjct: 1   MKHLSLARILCAVLGVALIAPSVHAQSVPRTIEPGQLTIAFTGDMPGTGYQD--GSMIGY 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D +  + +++ +     K++   +       ++Q+ ++D+++    WT  R   + L+  
Sbjct: 59  DGEILQRVANTL---KLKVKPALMEWSGTIASVQTGRVDVMAGTMGWTEQRAKIMTLSDP 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +   K   S++ +L G  +    G +    L               ++  
Sbjct: 116 IHY--FKNGIMQSSKTDWSTLKELEGRKVGTITGFSFIPELRKI-----KGLQLSQYDTS 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           +       A R DA  GD          +  P   +        +P
Sbjct: 169 DAAVRDLLAGRIDAVIGDPP--VVQYAISRNPQWKLRFNAFTDNNP 212


>gi|226357689|ref|YP_002787428.1| amino acid ABC transporter, periplasmic component [Deinococcus
           deserti VCD115]
 gi|226319931|gb|ACO47924.1| putative amino acid ABC transporter, periplasmic component
           [Deinococcus deserti VCD115]
          Length = 259

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 80/245 (32%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++L L+     +   +A+ L  +K  G L+         F     N    GF+
Sbjct: 1   MCHTRMSALLVLVPALCAAAPAHAATLAQVKASGVLRLATEGNYPPFNHY-KNKALTGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +   P   Q+  +  +   L L   + D++  +   T  R     + F  
Sbjct: 60  VELGNAIAKQLGVKP---QWTTVVFESLLLGLDRNRYDLVIASHGITPER--LKAVTFST 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++   G ++ +  G  ++  L G  + +   T+    +               F    
Sbjct: 115 P-HYCSGGVLVARPGGPRTLEDLKGKVVTMGVNTSYLGYVQKLPGIGG----VKTFPTTN 169

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A   +R DA   D               +   + D++    +  A+ + + E    
Sbjct: 170 DQLNAVLNNRADAMVLDRFNAIDASKVLPGKLQ---IGDVVFPERIGMAMRRNNAELEQA 226

Query: 241 VSWTH 245
           V+   
Sbjct: 227 VNRAL 231


>gi|330957420|gb|EGH57680.1| prephenate dehydratase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 265

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 77/259 (29%), Gaps = 11/259 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M    + ++  L+          A    S L  + + G L          +  ++ +G++
Sbjct: 1   MINLKYSALTVLLSGMTAMAPAQAQESNSHLDKVIQTGQLAVCTTGDYKPYTLLREDGEY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D+   R+L+ ++      +Q++P   K     + + + DI       +L R+     
Sbjct: 61  EGIDITLARSLAKSLG---VTVQWVPTTWKNLMPDMLAGKCDIGMGGISVSLERQKKAFF 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +                K    +V QL+  S+ +           + F   ++    + F
Sbjct: 118 SNTLDIDGKIPLVRCEDKALYQTVEQLNQPSVRLIEPAGGT---NEAFARAHLPKASLAF 174

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              + I       + D    D S     +              +      A  + + D  
Sbjct: 175 HDNKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTRSLQYGE-KAYLLPRDDVA 233

Query: 237 WYNIVSWTHYAMVTAEELG 255
           W   V    +      E  
Sbjct: 234 WKAYVDQWLHLSKATGEYQ 252


>gi|293605308|ref|ZP_06687694.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
 gi|292816364|gb|EFF75459.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
          Length = 278

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 87/260 (33%), Gaps = 16/260 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDF 63
                + L +    S     + L  IK+RG +  G+      F  +        G++ + 
Sbjct: 9   LARGAVSLALALTASAVHADATLDKIKQRGTVTIGVLANGGVFGSLDPATQQLIGWNPEL 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RAL+  +      +Q   +    R   L S ++D+L  + +    R   LG A  P  +
Sbjct: 69  ARALAEGLGVKAELVQ---VQTATRTQFLISGKVDLLIASMELNPERAEILGYAPTPF-F 124

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G      K  GI +   L G  +CV  G++    L+  + A         ++   +  
Sbjct: 125 RVGGAAATLKTSGIHTWEDLRGKPVCVSQGSSFARPLSTEYGA-----VVKGYKGASDSL 179

Query: 184 AAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A R  +C A   D +     L+   +    H  +   I  +       +G+ +    V 
Sbjct: 180 LALRGGQCVAAVHDSTLIQPLLRNNPEWAGYHAPIATEILPANSVVWTRKGEADTIAAVD 239

Query: 243 WTHY-----AMVTAEELGIT 257
                      + A E  + 
Sbjct: 240 KVVQDWHRSGWLIATEKRLG 259


>gi|289704648|ref|ZP_06501076.1| bacterial extracellular solute-binding protein, family 3
           [Micrococcus luteus SK58]
 gi|289558602|gb|EFD51865.1| bacterial extracellular solute-binding protein, family 3
           [Micrococcus luteus SK58]
          Length = 273

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 18/245 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                  L     ++   +   L     + + G L    +     F   +  G+  G+D+
Sbjct: 20  LLTGCAVLGGDAGSAGIVSDDDLSTSYGLVQPGVLTVCSDIPYPPFEF-EEKGELTGYDI 78

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               A++  +      +      A E   +L    ++  + +   T  R+  +   F   
Sbjct: 79  QLVEAVAEKLGL-GVNVIDSSFEAIESGASLTGCDVN--ASSISITEARQRVMA--FTLP 133

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              D    +  K  GI+ V    G  I VQA TT +        A      P+ FE    
Sbjct: 134 YLDDDLVLVAKKGSGITDVESAKGRRIGVQAATTGDEY------AQQNGLSPVQFEDGGM 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +A   DA  G+ S    L  +        ++  + +   L  A+     +  + V
Sbjct: 188 QIQAIQAGTVDAALGNQSV---LLYSLKDDDRFEVVESLPTGEQLGMAVGPQKAQLGSAV 244

Query: 242 SWTHY 246
           +    
Sbjct: 245 NRALQ 249


>gi|332076453|gb|EGI86916.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA41301]
          Length = 266

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNSLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|312862538|ref|ZP_07722780.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|322517453|ref|ZP_08070326.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
 gi|311101943|gb|EFQ60144.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|322123935|gb|EFX95494.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
          Length = 282

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 79/253 (31%), Gaps = 14/253 (5%)

Query: 1   MY-KDFF--VSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGD 55
           M  K       +    +    + S+ +S        G   +          F+  + NG+
Sbjct: 1   MKLKKILGITGVAIASVALLAACSSKSSKEASKSSGGKETINFATVGTTAPFSY-EENGE 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV+  +A+      D  ++++        F  L + +  +   N  ++  R+    
Sbjct: 60  LTGYDVEVAKAVFKD--SDKYEVKFQKTEWSSVFTGLDAAKYQMAGNNISYSEERD--QK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F            + K   I     ++G S  V  GT+T   L ++   H+ K   + 
Sbjct: 116 YLFSYPIGTTPAVLTVPKDSEIKKYDDIAGHSTQVVQGTSTATQLTEFNDKHSDKPVELN 175

Query: 176 FERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232
           +      ++       + D    D   + A  + N++ S    +     + P        
Sbjct: 176 YTNENITQMLTNLNEGKYDFKIFDAPTVNA-IIKNNKLSNLKTIELKSDQQPYIYFLFAD 234

Query: 233 GDTEWYNIVSWTH 245
              +    V+   
Sbjct: 235 NQKDLQKFVNKRL 247


>gi|146340448|ref|YP_001205496.1| putative signal peptide [Bradyrhizobium sp. ORS278]
 gi|146193254|emb|CAL77270.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS278]
          Length = 277

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 75/233 (32%), Gaps = 13/233 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCR 65
                +     ++ +   + L  ++    L+  +  G + +     A+G W GF ++   
Sbjct: 12  ALASAMTTTPASAQAAADNTLDRVRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMAN 71

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     K++Y+        L LQ+ +ID+           + +L + F    +  
Sbjct: 72  DIAKLL---DVKLEYVESTYGNSVLDLQAGKIDL---GFALNPTPQRALVIDFCGTVFPH 125

Query: 126 GQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G ++ K     + + ++     I V  G+  E     +             +  +E+ 
Sbjct: 126 PFGAMLKKGMEAKTWADINKPEVKIAVDVGSANEAVARRFAP----NATIKSLKSRDEVM 181

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               + R D     +         N     + IL       P +  + +   +
Sbjct: 182 LEMASGRVDVVVNALILGLTAIAKNPNLGSYKILQSPSVAIPSSMGVRREADK 234


>gi|170731489|ref|YP_001763436.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169814731|gb|ACA89314.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 264

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 74/237 (31%), Gaps = 22/237 (9%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   +   +A           L+ G+      F     NGD +GFD+D   A+       
Sbjct: 19  IGSGAALADAPT---------LRFGLEAQYPPFESKAPNGDLQGFDIDVGNAVCQ---TA 66

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
               +++  +      AL+ ++ D ++   + T  R     + F  I Y      I    
Sbjct: 67  KLSCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDFTTIIYRVPTQLIARTG 124

Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            G + +   L G  + V   +  E     +++   +    + ++   +  A   A R DA
Sbjct: 125 SGLLPTPESLKGKRVGVLQASIQETFAKAHWEPAGVA--VVAYQDQNQAYADLVAGRLDA 182

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
                 +     L+         +   +         +A  + +GD      +    
Sbjct: 183 TLVLAPSGQRGFLSRPDGKGFSFVGQPVHDDKILGSGIAFGLRKGDDALKAKLDAAI 239


>gi|108760413|ref|YP_633646.1| His/Glu/Gln/Arg/opine amino acid ABC transporter
           permease/periplasmic amino acid-binding protein
           [Myxococcus xanthus DK 1622]
 gi|108464293|gb|ABF89478.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Myxococcus xanthus DK 1622]
          Length = 481

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 83/251 (33%), Gaps = 19/251 (7%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKAN--GDWKGFDVDFCR 65
           +L L+ L  +  +   S L  +++ G L+ G +  G   +A    +  G  +GF+V+   
Sbjct: 1   MLVLLALLSSCGAEQDSGLARVRRTGELRWGADAQGGEPYAMEDPDAPGGMRGFEVELAE 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL+  +       +++  +      +L+    D+     + T  R  S  + F    Y  
Sbjct: 61  ALARELGVRA---RFVQNDWSSLVPSLERGSFDVALNGLEVTPSR--SGRILFTRPYYVF 115

Query: 126 GQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               +  +     +    L G  +   A +     L             + +E VEE   
Sbjct: 116 HLRLLARRDDAAITGLDALKGQRVGTLANSLAWDLLQR------SGVEAVPYEGVEEPYI 169

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                R  A   D     A +    RP   V+          A A+  G+ +    +   
Sbjct: 170 DLEQGRVRAVLMDDII--AQRYGQPRPGLRVVGDVGEG--YYAIAVRPGEEDLREALDTA 225

Query: 245 HYAMVTAEELG 255
              +  + EL 
Sbjct: 226 LGNIARSGELR 236


>gi|317047791|ref|YP_004115439.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316949408|gb|ADU68883.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 295

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 93/295 (31%), Gaps = 28/295 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-------------SILGDIKKRGFLKCGINTGLVGF 47
           M     V    L++   T FS+ A              +   I+    L    +      
Sbjct: 1   MRMKSLVVAASLLVSALTQFSSQAADAPLKMHADLHAQLPEKIRSSKTLNLVTDAHYPPC 60

Query: 48  -AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            +  + N    GF+ D   A+   +  +   +     +       ++S + D+       
Sbjct: 61  ESFAEDNKTMVGFEPDLWDAIGQVLGVNIKPVSI---DFAGLIPGVKSGRYDVAMECISD 117

Query: 107 TLLREISLGLAFRPI-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           +  RE    ++F            +  +K   +    L G  + VQ GT  E  +++ + 
Sbjct: 118 SAEREK--QVSFVNYAYATSEVYTLASEKSITNDPLTLCGLKVGVQTGTDFEKAISEIYT 175

Query: 166 AH-----NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            +           +     + +     + R D    D +++  +K     P   V +P +
Sbjct: 176 PNCTKNGKPAIQQVTLPSADAVLLGLYSGRVDFVLNDAASVDDIKQKAPHPIRTVQMP-L 234

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTTNPDV 273
           + K  L   + + +T+   ++      +         + + ++  +  D    ++
Sbjct: 235 MPKYYLGIVVAKENTQLAQVLLKALNVLHETGTYDKIMEKWDLEAMKLDKPGINL 289


>gi|119025487|ref|YP_909332.1| ABC transporter solute-binding protein [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765071|dbj|BAF39250.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 311

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 73/222 (32%), Gaps = 13/222 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + K G L  G++T       + A+G    GFDVD  +AL+     +         N    
Sbjct: 65  VTKDGKLTVGMDTSYAPAEFLAADGKTPVGFDVDIVKALAKTFGLEADP---QTSNFDSI 121

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             ++ S + DI   +   T  R     + F  +        +     G    S L G  I
Sbjct: 122 IPSIGS-KYDIGVSSFTITPER--MKAVDFVSMFKAGSTWVVKKGNPGKIDTSDLCGLKI 178

Query: 149 CVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            VQ GTT E  +          + +    +  +   ++       + D +  D       
Sbjct: 179 AVQTGTTQEEEVNKGAEQCKADNKLDIQILSNKLQTDVTTNVVTGKADVFYADSPVAGYA 238

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               D   E +     ++K   A AI +GD++    V     
Sbjct: 239 ISQTDDQLEALGEDVGVTKE--AVAIKKGDSDTAKAVQAAMQ 278


>gi|260438224|ref|ZP_05792040.1| putative amino acid ABC transporter solute-binding protein
           [Butyrivibrio crossotus DSM 2876]
 gi|292809416|gb|EFF68621.1| putative amino acid ABC transporter solute-binding protein
           [Butyrivibrio crossotus DSM 2876]
          Length = 268

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 82/256 (32%), Gaps = 27/256 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K   + +  ++ L   +   +           L  +K +G L  GI T          
Sbjct: 1   MKKFLAMILAGVLALSLAACGKSDKTSAGSSESDLEYVKNKGTLVVGI-TDFAPMDYKDD 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+W GFD D   A + ++      ++++ +    + + L+ K ID +      T   ++
Sbjct: 60  NGNWIGFDADMAAAFAESLGVK---VEFVEITWDNKLMELKGKTIDCVWNGMTLTE--DV 114

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGI-----SSVSQLSGASICVQAGTTTELTLADYFKAH 167
              +        + Q  I+ K+         S+  L G +  V++ +           A+
Sbjct: 115 VSAMECTKPYCNNQQIVIVKKENADKIKDKDSLKDL-GWTYAVESKSAGNEV------AN 167

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            +           +          DA   D S + A  +      E++     ++     
Sbjct: 168 ELGLKVTEVTAQSDALMEVAGGTSDAAIID-SLMAAAMVGEGTSYENLTYTVGLNDEKYG 226

Query: 228 PAIIQGDTEWYNIVSW 243
               +G      +  +
Sbjct: 227 VGFRKGSDLAEELNKF 242


>gi|15965340|ref|NP_385693.1| putative amino-acid-binding periplasmic signal peptide protein
           [Sinorhizobium meliloti 1021]
 gi|307312712|ref|ZP_07592343.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|15074520|emb|CAC46166.1| Putative amino acid ABC transporter [Sinorhizobium meliloti 1021]
 gi|306899437|gb|EFN30069.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 251

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 65/211 (30%), Gaps = 20/211 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V+I  + +  F S +   S L  + +R  +    N G      +  N    GFD
Sbjct: 1   MK--SMVAIASVSLSIFCSSAMAGSTLDRVNERKEMVVATNVGWPPQGFLDENNVLVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +  +   +++               + D+   +   T  R     + F  
Sbjct: 59  IDVANEIGKRLGAN---VRFETPEWATMTGGHWQGRFDLGVGSVAPTKARAEV--IDFAG 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA----------HNMK 170
           I Y+    +++H +  I S   L G  I V+ GT +E  +    +           +   
Sbjct: 114 IYYYSPYVYVVHAESSIQSEEDLDGKIIGVETGTASEDFINRRLEIDAPGLPPVQYNLEP 173

Query: 171 YHPIVFERVEEIDAAYRAH---RCDAYTGDI 198
                F          R     R DA     
Sbjct: 174 GEVRTFPDSMMPFDDLRLGNGVRLDAVIAPE 204


>gi|296157531|ref|ZP_06840366.1| Prephenate dehydratase [Burkholderia sp. Ch1-1]
 gi|295892303|gb|EFG72086.1| Prephenate dehydratase [Burkholderia sp. Ch1-1]
          Length = 264

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 77/269 (28%), Gaps = 19/269 (7%)

Query: 1   MYKDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K     +  L  +          ++ +   S L +I  RG L+         ++  KA
Sbjct: 1   MNKATLALLGALTGVLMHIGAAWAQSTAAAAPSRLDEIIARGTLRACTTGDYKPYSFYKA 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G ++G D+D   +L+ ++      ++    N    F+A    + D+       TL R+ 
Sbjct: 61  DGQFEGIDIDMTESLAKSLGVKTEYVKTTWSNLMNDFVA----RCDVGVGGVSPTLERQK 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMK 170
                   +                 +V         + V  G T E     YF   N  
Sbjct: 117 RAFFTQAYMVDGKTPIVRCDDVSKYQTVAQIDQPATRVIVNPGGTNERFAKQYFPHAN-- 174

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
               V+     +     A + D    D S    L+   +     V           A  +
Sbjct: 175 --LTVYPDNVTVFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKAWLL 231

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            +GD      V    +      E      
Sbjct: 232 PRGDVALQEYVDQWLHLARATGEYQAISD 260


>gi|320533837|ref|ZP_08034422.1| bacterial extracellular solute-binding protein, family 3
           [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133932|gb|EFW26295.1| bacterial extracellular solute-binding protein, family 3
           [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 306

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 11/211 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L    +T       +  +G   G+DVD   A+++ +    +    +     +  +A
Sbjct: 60  EDGVLNVAASTDYAPAEFLDPSGKAVGYDVDLTNAIAAVLGVKGT----VHTAEFDSIIA 115

Query: 92  LQSKQIDILSRNTDWTLLREISLGLA-FRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
               + D    +   T  R   + +  +  +           K    S   QL G +I V
Sbjct: 116 SIGSKYDAGISSFTVTPERIAEVNMTSYINVGSRFNVQAGNPKGVETSDHLQLCGRTIGV 175

Query: 151 QAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           Q GT  E T+ D      K          + +  E          DA T   S +    +
Sbjct: 176 QVGTAQETTMRDAAEKCAKKGKAVLSVRSYSKQSEATTGLVGGTIDA-TYSDSTVAGYAV 234

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                S+ V L +I   +P      + D ++
Sbjct: 235 ELTD-SQIVTLGEIEDAAPQGVVTSKADPQF 264


>gi|258615113|ref|ZP_05712883.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium DO]
 gi|289565909|ref|ZP_06446349.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|293556866|ref|ZP_06675427.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1039]
 gi|293563614|ref|ZP_06678058.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1162]
 gi|294614606|ref|ZP_06694510.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1636]
 gi|294621215|ref|ZP_06700400.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium U0317]
 gi|314938843|ref|ZP_07846114.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943648|ref|ZP_07850402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314949084|ref|ZP_07852444.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314952177|ref|ZP_07855195.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314991849|ref|ZP_07857306.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996560|ref|ZP_07861597.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|289162282|gb|EFD10142.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|291592508|gb|EFF24113.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1636]
 gi|291599211|gb|EFF30243.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium U0317]
 gi|291600950|gb|EFF31241.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1039]
 gi|291604414|gb|EFF33904.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1162]
 gi|313589301|gb|EFR68146.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593554|gb|EFR72399.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313595709|gb|EFR74554.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597685|gb|EFR76530.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313641854|gb|EFS06434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313644500|gb|EFS09080.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 530

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 81/292 (27%), Gaps = 30/292 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW- 56
           M K+     +    +F      + +   +       + G+  G   F        N    
Sbjct: 1   MKKNMVSVAVLFAFVFSLFSVGSLANADEKTPSDEFRVGMEAGYAPFNWSQQTDENNALP 60

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +      +  +         ALQS +ID +      T 
Sbjct: 61  IQGQNSYAGGYDVQIAKKVADGLGKK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTA 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++ K        S++ LSGA I  Q  T     +     
Sbjct: 118 ERRK--EIDFTDPYYESQLVVVVQKDSKYAKAKSLADLSGAKITAQLNTFHYTVIDQIPD 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKS 224
               +      +    +  A  +   D Y  +          N           D    +
Sbjct: 176 VQKQQ----AMDNFSAMRTALASGMIDGYVSERPEGVTATSVNKDLEMLEFSGADGFQTN 231

Query: 225 P----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           P    ++  + +GD +    V+     +   E   I  + +      T + +
Sbjct: 232 PEDVQISVGMRKGDPDIQK-VNQILSGISNDERTKIMDQAVKDQPAATDSEE 282


>gi|309800806|ref|ZP_07694938.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
 gi|308222342|gb|EFO78622.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
          Length = 271

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 84/247 (34%), Gaps = 11/247 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +     I++  ++  T+ S++ + + +G  +  G+ T   G   +    D+ GFD+   R
Sbjct: 1   MLCAASIVVGVSACGTSISVVTNGQAQGPTITIGVATDQPGLGLLHGK-DYSGFDITVAR 59

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     ++ +  +    R  AL S  +D++  +       +    + F       
Sbjct: 60  YVAQYLGFAGKQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHD--DEVTFAGPYLTV 117

Query: 126 GQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            +  ++       I SV  L G ++C   G+ +        +    K      +   +  
Sbjct: 118 RRDLLIRADDKDGILSVDDLDGKTVCTAKGSISGS----DMRNLTDKMTVEERDTYPQCV 173

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A      DA   D   L  L           ++ +   +     A+  G +E    +  
Sbjct: 174 TALMIGEADAIISDDVILTGLAADRGGGY-LKVVGEPFGEQSYGIAVRNGKSELVGQIDA 232

Query: 244 THYAMVT 250
              AMV 
Sbjct: 233 ALKAMVA 239


>gi|238761684|ref|ZP_04622659.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia kristensenii ATCC 33638]
 gi|238700198|gb|EEP92940.1| Polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Yersinia kristensenii ATCC 33638]
          Length = 275

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 72/248 (29%), Gaps = 17/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  +I   +S    A    +IK+ G L+ G+       A     G+  G+D
Sbjct: 22  MKKLPLGMMILALI---SSQQVLAKSWQEIKQSGELRIGVPGDYAPLAFHNKQGELIGYD 78

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  ++L  ++     K+ ++P +       L + + DI       T  R     L+  P
Sbjct: 79  IDMAKSLGESL---KLKVNFVPSSWPTLSEDLAADKFDIAMGGVTETPGRAAQFALS-SP 134

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +           ++       +                    +  A+  +   I  +   
Sbjct: 135 VVKNGKIALANCQQSQKFPTLEAIDRKTVKVIVNPGGTN-QSFVDANIKQAQIIRTKDNV 193

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQGDT 235
                 R    D    D   +      +  P         ILP   S       + + + 
Sbjct: 194 ANLQGVRDQSADIMFTD--LIEGDYYQSKEPGVFCVATPEILPGTGSYKVY--MMEKDNQ 249

Query: 236 EWYNIVSW 243
                V+ 
Sbjct: 250 PLLKEVNQ 257


>gi|168236538|ref|ZP_02661596.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194737334|ref|YP_002113676.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194712836|gb|ACF92057.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290386|gb|EDY29742.1| polar amino acid ABC transporter, periplasmic amino acid-binding
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 256

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 78/250 (31%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+ ++ L +      S  A    +IK+   L+ G+ +     A         GFD
Sbjct: 1   MKKVYFMFVILLSL--SGIHSAMAKPWQEIKESKELRVGVPSDYAPLAFHNRQNKLIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I ++P +       L + + DI       T  R     L+   
Sbjct: 59  IDMAYSLGKAL---HLNILFVPSSWPTLSTDLAADKFDIAMGGITETPGRRKQFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +          ++     S+  +   G  I V  G T +  +  + +        I  + 
Sbjct: 116 LKNGKIALTQCNRINDFKSLEDIDRKGVRIVVNPGGTNQDYVDKHIR----YADVIREKD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQG 233
            +      R    D    D   L      N  P         ILPD          + + 
Sbjct: 172 NDATLQRIRERSADVMFTD--LLEGNYYQNKEPGVFCVSTRSILPDTAGNKVY--MMAKD 227

Query: 234 DTEWYNIVSW 243
           +    + V+ 
Sbjct: 228 NQYLLDAVNS 237


>gi|283954389|ref|ZP_06371909.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794006|gb|EFC32755.1| glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 256

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 77/248 (31%), Gaps = 26/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +       + F + + NA           L  G+  G   F      G   G  
Sbjct: 1   MRKIILI------FMSFFALNLNA---------KDLVVGMELGYPPFEMSDKVGKPSGIS 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF    +     +   +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 46  VDFLETFAKKYHYN---LIIKNIAWDGLIPALKTAKIDLIMSSMTITDERKKV--VDFSI 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +   K  I ++  L   G  + ++ G+T  L      K         +F++
Sbjct: 101 PYAKANLAILTPLKSDIKNIKDLDKKGKILALKRGSTGHLYAVKNLK----NATINLFDK 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                      + D +  D   +Y     +   +  ++ P   +      A+ +G+TE  
Sbjct: 157 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNTELK 216

Query: 239 NIVSWTHY 246
             +     
Sbjct: 217 KELDEFIT 224


>gi|225350857|ref|ZP_03741880.1| hypothetical protein BIFPSEUDO_02431 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158313|gb|EEG71555.1| hypothetical protein BIFPSEUDO_02431 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 319

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 73/224 (32%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       +  +G    GFDVD  +AL++       ++     N  
Sbjct: 71  ESVTKDGKLTVGMDTSYAPAEFLAEDGKTPVGFDVDIAKALANMFG---LEVVPQTSNFD 127

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ + + DI   +   T  R     + F  +        +        + S L G 
Sbjct: 128 SIIPSIGT-KYDIGISSFTITPER--MEAVDFVSMFKAGSTWVVKKGNPNKVATSDLCGL 184

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            I VQ GTT E  +             +   +  +   ++       + D +  D     
Sbjct: 185 KIAVQTGTTQEEEVNAAAKQCKADGKSEVQILSNKLQTDVTTNVATGKADVFYADSPVAG 244

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   E +     ++K   A AI +GD++    V     
Sbjct: 245 YAIAQTEDTLEALGEDVGVTKE--AVAIKKGDSDTAKAVQAALQ 286


>gi|52424759|ref|YP_087896.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306811|gb|AAU37311.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 239

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 66/222 (29%), Gaps = 16/222 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +   +      F      G+  GFDVD   AL   +    +   +           L+ K
Sbjct: 22  ISFAMEPTYPPFEFTNEKGEIIGFDVDIANALCKEM---QANCTFKSQAFDALIQGLKQK 78

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D        T  R+    + F    +     FI  K    + V      +I VQ GTT
Sbjct: 79  RFDASISGMGITEARKK--QVLFTEPYFSSSAAFIAKKGTDFTKVK-----TIGVQNGTT 131

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +  +         +Y    +   ++     +  R DA  GDI  L  +       +   
Sbjct: 132 YQNYII----KEKPEYEVKAYASFQDALLDIQNGRIDAIFGDIPVLVDMIKKTPELAFAG 187

Query: 216 ILPD--IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              D      + L  A  + + E  +  +     +    E  
Sbjct: 188 EKIDNKTYFGNGLGIAANKANQELIDEFNQALIKIRQNGEYQ 229


>gi|328956044|ref|YP_004373377.1| extracellular solute-binding protein family 3 [Coriobacterium
           glomerans PW2]
 gi|328456368|gb|AEB07562.1| extracellular solute-binding protein family 3 [Coriobacterium
           glomerans PW2]
          Length = 279

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 88/276 (31%), Gaps = 40/276 (14%)

Query: 1   MYKD--------FFVSILCLIILFFTSFSTNASILGD--------------IKKRGFLKC 38
           M K         F +++  +I L   S ++                     +   G L  
Sbjct: 1   MKKMGSVRYVVPFMLALATVIGLAACSQASKGGDASKGSGASGESNSSDYTLTSPGKLTF 60

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS-KQI 97
             +     F  +  +G + GFD++  +A++  +  +     +  L       A+ +  Q 
Sbjct: 61  ATSPDFPPFENL-KDGAYVGFDIEIAKAVAKQMGLEAE---FKNLQFDGITTAIAAGGQA 116

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-----QLSGASICVQA 152
           D           RE    + F    Y D Q   + K   I+S +        G  I VQ+
Sbjct: 117 DAGISGITIEPEREKV--VDFSSGYYTDDQAIAVMKGSPITSDNAESELNKQGVVIAVQS 174

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT E  +    K +        +    +  AA +A +  A   + S      +  D   
Sbjct: 175 GTTGEAFV----KENYPHATTQSYGNSTDCFAAVQAGQAAAVCTNRS--VVQNMLADAYP 228

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +  I+    +    A A+ + +      +     A+
Sbjct: 229 DAQIVAQSATGEQYAIAVSKDNPGLKQGIDRALKAL 264


>gi|150016942|ref|YP_001309196.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903407|gb|ABR34240.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 287

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 90/259 (34%), Gaps = 19/259 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            K    ++L + I+       N          L  +K++G L    +   + FA +    
Sbjct: 5   KKSLVFAMLLINIIQLIFCGANIPNNEMTKDRLERVKEKGLLVIASSND-IPFAYIDPKT 63

Query: 55  D-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREI 112
             + G D +  R  +  +    +K++   +        L +   IDI++     T  R+ 
Sbjct: 64  KEFTGIDAEIIREAAKRLG--INKVEMKQIPFNNLLKQLNTDDSIDIVADGMYVTDERKK 121

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                F  I Y + +  I  K   I        A I  Q G T  L LA+ +KA  +   
Sbjct: 122 --EALFTNILYKESEAIITPKVSKIVFKEDFKNAVIGAQVG-TAFLDLANKWKAEGVVKD 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPA 229
            + F+   ++ +A    + DA   D S   +  +        V+ P   +      +A A
Sbjct: 179 VVSFKNQNDLLSAVSTKKIDAAITD-SIFASYMIFRSNLYLRVLPPTDYTPESPGKIAAA 237

Query: 230 IIQGDTEWYNIVSWTHYAM 248
           + + D      ++     M
Sbjct: 238 VRKNDITLAKAINEKIDEM 256


>gi|319897353|ref|YP_004135549.1| arginine-binding periplasmic protein [Haemophilus influenzae F3031]
 gi|317432858|emb|CBY81223.1| arginine-binding periplasmic protein [Haemophilus influenzae F3031]
          Length = 239

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 81/259 (31%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G   GFD
Sbjct: 1   MKKTLLTAILLGSSIAVSAQ--------------ELIFAMEPSYPPFETTNAKGQIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVTNAICQEI---QATCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 ++ R D   GD + L         P    I   + +K      L  A+ + + +
Sbjct: 154 NAILDLKSGRIDIILGDTAVLADTIS--KEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKD 211

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 212 LAAQLNKGLAAIKANGEYQ 230


>gi|212716468|ref|ZP_03324596.1| hypothetical protein BIFCAT_01392 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660721|gb|EEB21296.1| hypothetical protein BIFCAT_01392 [Bifidobacterium catenulatum DSM
           16992]
          Length = 323

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 72/224 (32%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       +  +G    GFDVD  +AL++    +         N  
Sbjct: 75  ESVTKDGKLTVGMDTSYAPAEFLAEDGKTPIGFDVDIAKALANMFGLEAVP---QTSNFD 131

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ + + DI   +   T  R     + F  +        +          S L G 
Sbjct: 132 SIIPSIGT-KYDIGISSFTITPER--MEAVDFVSMFKAGSTWVVKKGNPNKVDASDLCGL 188

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            I VQ GTT E  +    K        +   +  +   ++       + D +  D     
Sbjct: 189 KIAVQTGTTQEEEVNADAKQCKADGKSEVQILSNKLQTDVTTNVATGKADVFYADSPVAG 248

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   E +     ++K   A AI +GD++    V     
Sbjct: 249 YAIAQTEDTLEALGEDVGVTKE--AVAIKKGDSDTAKAVQAALQ 290


>gi|241663960|ref|YP_002982320.1| arogenate dehydratase [Ralstonia pickettii 12D]
 gi|309781450|ref|ZP_07676186.1| cyclohexadienyl dehydratase [Ralstonia sp. 5_7_47FAA]
 gi|240865987|gb|ACS63648.1| Arogenate dehydratase [Ralstonia pickettii 12D]
 gi|308919863|gb|EFP65524.1| cyclohexadienyl dehydratase [Ralstonia sp. 5_7_47FAA]
          Length = 271

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 65/237 (27%), Gaps = 19/237 (8%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
           +  +   + L +I  RG L+ G       F      +G + G DV+    L+ A+     
Sbjct: 24  SQTAPATNRLDEIIARGTLRVGTTGDYKPFTYKNPADGRFIGLDVEMGERLAKALGVK-- 81

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++ +P           + + DI       TL R+      +      DG+  I   +  
Sbjct: 82  -LEIVPTTWSTLMQDFAADRYDIAMSGVSVTLERQK--KAFYSIPYQRDGKTPITRCENQ 138

Query: 137 ISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               +            V  G T E    ++ K         V+     I     A R D
Sbjct: 139 SKYQTLAQIDQPNVRAVVNPGGTNEKFAREHLKQA----QIRVYPDNVTIFNEIVAGRAD 194

Query: 193 AYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
               D       +  +       P       +     P          +W    + +
Sbjct: 195 LMMTDAVETKLQQKLHPELCAVHPEAPFDFSEKAYLLPRDVVFKNFVDQWLRQTTES 251


>gi|56708859|ref|YP_164900.1| polar amino acid ABC transporter periplasmic substrate-binding
           protein [Ruegeria pomeroyi DSS-3]
 gi|56680544|gb|AAV97209.1| polar amino acid uptake family ABC transporter, periplasmic
           substrate-binding protein [Ruegeria pomeroyi DSS-3]
          Length = 256

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 17/223 (7%)

Query: 35  FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +K GI       FA   + G+W G++++   A+  A   D       P+       +L 
Sbjct: 25  EVKIGIAAEPYPPFASPDSAGNWVGWEIEVIDAVCKAAALD---CVLTPVAWDGIIPSLT 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
            KQID +  +   T  R     + F    Y      +  K   I  S + L+G  I VQA
Sbjct: 82  GKQIDAIMASMSITEER--MQTIDFSNAYYNTPAVIVADKSLDIDASPASLAGKIIGVQA 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T  +     YF          V++  +E +    A R DA T   S   A  +  D   
Sbjct: 140 STIHQAYANAYFG----DAEIRVYQTQDEANQDLYAGRIDA-TQADSIAMADFVATDAGQ 194

Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
              I  ++ +   +        + +GD      ++    A++ 
Sbjct: 195 CCEIKGNVANDEAILGKGVGAGVRKGDDALREALNKGIAAILA 237


>gi|170745093|ref|YP_001766550.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658694|gb|ACB27748.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 269

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 74/238 (31%), Gaps = 14/238 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
            +L   +       L  I + G L    ++    F+    +G+  G +V   R +   + 
Sbjct: 19  GLLAAPAARAAEGKLELI-EPGKLIVATDSTFAPFSMRTPSGELDGLEVRVMREVCRRLG 77

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            + S +           + L + Q DI S + D T  R+  +   F       G   +  
Sbjct: 78  LEYSPVNIK---FDALLVGLMADQYDITSESMDITPARQKQVA--FADGWLESGARIVTR 132

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K  GI     L G ++   + +T      +             ++   +          D
Sbjct: 133 KDTGIKGPDDLKGRNVGALSASTFGKLAEE------HGATLKSYKTAADAMQDLVGGNID 186

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A   D  A+        R    V++   +S      AI +G    +  V+     MV 
Sbjct: 187 AVIND--AVAGNYAIKARKLPLVMIETPLSTVQKGFAIKKGKPNLHAAVNKALAEMVA 242


>gi|77414478|ref|ZP_00790627.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 515]
 gi|77159457|gb|EAO70619.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 515]
          Length = 270

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 12/174 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   +SI  ++     + S  AS    +     LK   ++    F     +G +KG+D
Sbjct: 1   MFKKIILSIATIVATASLAVSVQAS--EKV----ELKVATDSDTAPFTYQ-KDGKFKGYD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+         K+ +  +        + + + D+ + +  +   R       F  
Sbjct: 54  VDVVKAVFK---GSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAE--KYLFSE 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                    +  K     S+S LSG S  V +G      L ++ K H  K    
Sbjct: 109 PISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIK 162


>gi|119944081|ref|YP_941761.1| arginine ABC transporter solute-binding protein [Psychromonas
           ingrahamii 37]
 gi|119862685|gb|ABM02162.1| ABC arginine transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 260

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 96/311 (30%), Gaps = 62/311 (19%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            FF+SI  L        ST      +IK    ++   +     F  +      +GFD+D 
Sbjct: 12  RFFLSIFLLFSPLTVLSSTAVPN-DNIK----VRFATDANYYPFEYLDEQQQIQGFDIDM 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +A+  A+        +     +   L+L   + D +    D T  R  ++G  F    Y
Sbjct: 67  AKAICKAV---NLTCSFHHQRFESLLLSLSFARFDAVISALDITSERLKTVG--FTNSYY 121

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            +   FI  K           G  I V++ ++ +  L  Y K ++     I +    EI 
Sbjct: 122 ENTPVFISKK--SAEERFSTVGKFIGVRSNSSNQEYLIKYEKENSF---IISYVTYYEIL 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +   A + DA   D  A+ +  L       H  +                          
Sbjct: 177 SDLSAEKIDAAFVDQ-AVASEFLKQKDNRIHFDVQK------------------------ 211

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
                + + +  +  +      +        R             LGL      +II   
Sbjct: 212 -----INSSQRKLFSQGYGIAIQKGNVILQNRL-----------NLGL------KIITEN 249

Query: 304 GNYGEMFDRNL 314
           G Y ++++R  
Sbjct: 250 GTYQKIYERYF 260


>gi|84502692|ref|ZP_01000811.1| ABC basic amino acid transporter, solute-binding protein
           [Oceanicola batsensis HTCC2597]
 gi|84389087|gb|EAQ01885.1| ABC basic amino acid transporter, solute-binding protein
           [Oceanicola batsensis HTCC2597]
          Length = 244

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 74/255 (29%), Gaps = 26/255 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +   L     T+ S +            ++ G       F  +  NG+  GF+
Sbjct: 1   MKTLMMTAAFALSAGMVTAESHSM----------TVRLGTEGAYPPFNIIDDNGEVAGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L +         +++  +       L S   D++      T  R+    + F  
Sbjct: 51  REVGDELCARA---ELTCEWVTNDWDSIIPNLVSGNYDVIIAGMSITDERDEV--IDFTQ 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +             +S  + + G  +  Q  T     +A+           I F   +
Sbjct: 106 NYFPPATS----SYLAMSEDADVEGGVVAGQTATIQAAHVAE------SGATLIEFATPD 155

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA +    DA   D   L      +D     V  P  + K  +   + + DTE    
Sbjct: 156 ETIAAVQNGEADAVFADTDFLKPFVEESDGEFMFVGEPVQLGKG-IGLGLRESDTELKEK 214

Query: 241 VSWTHYAMVTAEELG 255
            +    +M     L 
Sbjct: 215 FNAAISSMKEDGSLN 229


>gi|329298433|ref|ZP_08255769.1| Arogenate dehydratase [Plautia stali symbiont]
          Length = 254

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 16/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++   +L     +   S L D+++   LK         +  ++++G ++G D
Sbjct: 1   MK-----TVILSALLLVAGAAQAQSHLDDVRQSKTLKVCTTGDYKPYTFLRSDGQYEGLD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAF 118
           +   ++L++++    +K++++P   K       ++Q DI       TL R+         
Sbjct: 56  ISMAQSLAASLG---AKVKWVPTTWKTLSEDFVARQCDIALGGVSVTLKRQQIAWFAQPL 112

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K             +   AG T E  +  +          +    
Sbjct: 113 GVDGKIPLVRCTDKAKYQTVEQINQPQVRVIEPAGGTNEAFVHRHLPQA-----SLQLAE 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I      ++ D    D S     +         +     +     A  I   D  W 
Sbjct: 168 NTGIFQQLVDNKADVMITDASEALFQQQHYP-SLCAINPQQPMQYGEKAYMIPHDDMSWK 226

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +      E  
Sbjct: 227 LYVDQWLHLSTATGEYA 243


>gi|300854670|ref|YP_003779654.1| putative transport/signal transduction system protein [Clostridium
           ljungdahlii DSM 13528]
 gi|300434785|gb|ADK14552.1| putative transport/signal transduction system protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 826

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 108/332 (32%), Gaps = 82/332 (24%)

Query: 3   KDFFVSILCLIILFFT-------------SFSTNASILGDI------KKRGFLKCGINTG 43
           K F +  + ++                  S ++N   +  +      K    +  G +  
Sbjct: 7   KVFIIVFIAIVTCLLGNNFGKAVFADNKESVNSNKETIYKVLGNDEKKADRTIIIGDDKD 66

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              ++ +  NG+  GFDV+  +A + A+     K++       E    L++ +ID+++  
Sbjct: 67  YPPYSFIDQNGNPTGFDVELAKAAAEAMG---FKVKIKLSVWSEAMDELENGKIDVIAGM 123

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
                 ++     +F   T   G      K + I +++QL G ++ V++   +   L   
Sbjct: 124 F---YSKDREKFYSFTTKTAITGADVFTRKGESIKNINQLRGKTVVVESDEISGEYL--- 177

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            K  N+  + +     EE       ++ D         +   +  D+ S       +I+ 
Sbjct: 178 -KKQNLGINFVKVHSSEEALKLISMNKYDYAVVSTIIGH-YFMKKDKISNIKGNGLVINP 235

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
                A+ +G+ +    ++                                         
Sbjct: 236 DDYCIAVKKGNEDLLFALNG---------------------------------------- 255

Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                 GL      +I++  G Y E++++ LG
Sbjct: 256 ------GL------QILKATGKYDEIYNKWLG 275


>gi|319941074|ref|ZP_08015410.1| hypothetical protein HMPREF9464_00629 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805431|gb|EFW02233.1| hypothetical protein HMPREF9464_00629 [Sutterella wadsworthensis
           3_1_45B]
          Length = 254

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 69/218 (31%), Gaps = 14/218 (6%)

Query: 35  FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L+ G  T    F  V + NG+++GFD+D  R +      D   +Q + +       AL 
Sbjct: 29  TLRVGSLTVYAPFEYVNSQNGEYEGFDMDLIREIGRRKGFD---VQIISMTLDGLVPALV 85

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQ 151
           S  ID        T  R     + F       G   +  K+    I SV  L    +C +
Sbjct: 86  SGNIDAAVSALTITPERAE--KVDFTKPYLNAGLTVMTTKENAPKIKSVKDLENKLLCAE 143

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDR 210
            G++  L +               F    +         C A   D     Y L     +
Sbjct: 144 IGSSGALVMKRI-----PGTTVRTFNSAADAFLELNKGGCFAMLNDGPVNKYFLTQKASK 198

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 L  ++S      A+ +G+ +    +      M
Sbjct: 199 SMNLTALDFVVSDDFYGMAVQKGNKKLLKELDDALDEM 236


>gi|295691960|ref|YP_003600570.1| amino acid ABC transporter, permease component [Lactobacillus
           crispatus ST1]
 gi|295030066|emb|CBL49545.1| Amino acid ABC transporter, permease component [Lactobacillus
           crispatus ST1]
          Length = 537

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 85/300 (28%), Gaps = 32/300 (10%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M    +   V +  L+ LF     ++       K  G LK G+      +          
Sbjct: 1   MKSRFRWMAVIMSVLLSLFIGFSLSSNQTQAAKKDSGTLKIGMEANYPPYNWTQPTKANG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVPIDGSNSYANGYDVQIAKIIGKRLHKK---VIVEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      ++   GA +  Q GT     +  
Sbjct: 118 PTAERRK--AINFSEPYRKSTFVVITNKASKYSNAKKLTDFKGAKLTAQQGTLHYDLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVIL 217
              A               +  +  +   D Y  +     +    N        ++    
Sbjct: 176 LKGAKREP----AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMAGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKRDQLMSQAIKEQPKAGNETKKENWL 291


>gi|227325817|ref|ZP_03829841.1| putative amino-acid ABC transporter binding protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 263

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 81/262 (30%), Gaps = 18/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+L L   F  +   +     +  +   LK G           + N    GFD
Sbjct: 1   MMKKVTLSVLALTTAFLVAGCDSGKSGSE--QEKVLKVGSTGQSYPSGFKQDN-KLVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      ++++  +       L+++++D ++     T  R       F  
Sbjct: 58  VEVTETIAKDLNYK---VEWVTADFSGLMGQLEARKLDTVANVVAITPAR--QEKYNFAQ 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   + HK    I++++ L G ++    G+     L   F   +   +   +E  
Sbjct: 113 PYSYYGSQIVTHKDNTDINTLADLKGKTVAGVLGSNHVNNLKKAFA--DGSVNIRTYETR 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-------NDRPSEHVILPDIISKSPLAPAIIQ 232
           +       + R + Y      L A              P     +     K     A+ +
Sbjct: 171 DGAMNDALSKRVEGYVNSRPILLAEINKRNLPFKLVGEPLVIEEVSFPFHKDENGDALRK 230

Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254
                   +         AE+ 
Sbjct: 231 QFDAELTKMREDGRLKALAEKY 252


>gi|313885604|ref|ZP_07819354.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619334|gb|EFR30773.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 551

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 93/313 (29%), Gaps = 45/313 (14%)

Query: 1   MYKDF------FVSILCLIILFFTSFSTNASILG-----------DIKKRGFLKCGINTG 43
           M + F       ++++  + LF    S     +            D+  +G LK G+   
Sbjct: 1   MKRMFNVWLNILLTLIMAVSLFAPLVSAQDLTIELTDDTRQAIEEDLSDKGILKVGMEAN 60

Query: 44  LVGFAE---VKANGDWK----------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
              +        +G             G+DV   + L+ A+     ++Q + L       
Sbjct: 61  YAPYNWSQATDKDGAVAISNSPGEFANGYDVQIAKQLAEALG---LELQIVKLEWDGLPP 117

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGAS 147
           ALQS +ID +      T  R+    + F    Y      ++ K        S+     A 
Sbjct: 118 ALQSGKIDAIIAGMSPTPERKK--QIDFSDSYYKASMVIVVQKDGPYAKAQSIRDFKDAK 175

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +  Q  T     L     A       +  +    + +A  +++ D +  DI+    +   
Sbjct: 176 MTAQLNTFHVDLLDQLEGA----DIQVPMDTFPTMTSALISNKIDGFLSDIAGAMGIVAA 231

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYN--IVSWTHYAMVTAEELGITQKNINQVS 265
           N     ++   +  S       +            ++      + + +       + Q+ 
Sbjct: 232 NPN-LTYLQFDEANSFELGGDIVTDVSVGLRKDSTLNEPINQALASLDQDYQNDLMEQMV 290

Query: 266 KDTTNPDVQRFLG 278
                 +   F G
Sbjct: 291 NLNEKGEDTSFFG 303


>gi|307708789|ref|ZP_07645251.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615155|gb|EFN94366.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 334

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 13/215 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K                    + +T A  L  I  +       ++    F    ++  
Sbjct: 117 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 175

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G D++  +A++     +   I+           A+Q+ Q D +      T  R+ +  
Sbjct: 176 FTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 230

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F    Y       + +   I+S   L G ++ V+ GT ++  L +    +  K     
Sbjct: 231 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 288

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           F     +  +      DA   D   L        +
Sbjct: 289 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQK 323


>gi|256847563|ref|ZP_05553009.1| amino acid ABC transporter [Lactobacillus coleohominis 101-4-CHN]
 gi|256716227|gb|EEU31202.1| amino acid ABC transporter [Lactobacillus coleohominis 101-4-CHN]
          Length = 257

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 72/252 (28%), Gaps = 18/252 (7%)

Query: 12  LIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRAL 67
           ++        T  +     IK    L  G +     F           + GFD+     +
Sbjct: 1   MVAGGLAGCGTKENTAYNKIKSEKTLTMGTSADFAPFEFPVVKNGKKTYNGFDIMVANQI 60

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +      ++   +        LQ+ ++ ++      T  R     + F    Y + +
Sbjct: 61  AKDMGVK---LKVQNMQFSSLIGELQNNKVQMVMAGMTATKERRK--AVDFSKPYYTESE 115

Query: 128 GFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
             ++ K      ++ +   GAS   Q G+     + +       K H +    V  +   
Sbjct: 116 SLLVRKSDANKYTTQASTKGASFGAQQGS-----IQENVGKSQTKAHIVSEGLVTSLTTE 170

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVI--LPDIISKSPLAPAIIQGDTEWYNIVSW 243
            +  + D                          LP   S+  +  A+ + + +    V+ 
Sbjct: 171 LKGGKLDGVVLAQKVAEEYVKKYPNDYAIAPVKLPVPKSQREICIALPKNEPKLKKKVNA 230

Query: 244 THYAMVTAEELG 255
               M    +L 
Sbjct: 231 EITKMQKNGQLD 242


>gi|306822682|ref|ZP_07456060.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium dentium ATCC 27679]
 gi|304554227|gb|EFM42136.1| glutamate ABC superfamily ATP binding cassette transporter, binding
           protein [Bifidobacterium dentium ATCC 27679]
          Length = 281

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 86/250 (34%), Gaps = 13/250 (5%)

Query: 6   FVSILCLI--ILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVD 62
             ++LC    ++  ++  T+ S++ + + +G  +  G+ T   G   +    D+ GFD+ 
Sbjct: 8   IAAMLCAASIVVGVSACGTSISVVTNGQAQGPTITIGVATDQPGLGLLHGK-DYSGFDIT 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +     ++ +  +    R  AL S  +D++  +       +    + F    
Sbjct: 67  VARYVAQYLGFAGKQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHD--DEVTFAGPY 124

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +  ++       I SV  L G ++C   G+ +        +    K      +   
Sbjct: 125 LTVRRDLLIRADDKDGILSVDDLDGKTVCTAKGSISGS----DMRNLTDKMTVEERDTYP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A      DA   D   L  L           ++ +   +     A+  G +E    
Sbjct: 181 QCVTALMIGEADAIISDDVILTGLAADRGGGY-LKVVGEPFGEQSYGIAVRNGKSELVGQ 239

Query: 241 VSWTHYAMVT 250
           +     AMV 
Sbjct: 240 IDAALKAMVA 249


>gi|260461827|ref|ZP_05810073.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|319785357|ref|YP_004144833.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|259032468|gb|EEW33733.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|317171245|gb|ADV14783.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 278

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 75/241 (31%), Gaps = 22/241 (9%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +    +L  +     L   +       + +    +  G D+D  +A++ ++  +   +++
Sbjct: 25  ANAGEVLDRVLATKTLTVAVGPDWGPLSHLNDKHELDGSDIDLAKAIAKSLGVE---VKF 81

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +  N           + D+       T  R             +  +  I+HK    + +
Sbjct: 82  VTTNWDMIAAGKWQGRWDMGMGQMTPTKERAKLFEF---VTYSYIPEVAIVHKDSKATKL 138

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----------FERVEEIDAAYRAH- 189
           S L G  I V +G   E      F    +   P+           ++    +    R   
Sbjct: 139 SDLDGKVIGVGSGDVAESYAKHNFTPGWVTAKPVKYQFTPGELKIYQTDSLLYDDLRLGD 198

Query: 190 --RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
             R DA           +          IL + +   P A +I+ GD E+ + V+     
Sbjct: 199 GVRLDAVLNSD---NGARNAIKAGYPIKILDEPLFSGPAAISILHGDKEFLDRVAAAVKT 255

Query: 248 M 248
           M
Sbjct: 256 M 256


>gi|220913227|ref|YP_002488536.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
 gi|219860105|gb|ACL40447.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
          Length = 311

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L+ G  +       +  +G + G+D +  RA++  +     +++++  +       + 
Sbjct: 73  GKLEVGTLSDAPPNIFIDPSGKFTGYDNELLRAIAGKLG---LEVEFVATDFSALLSQVS 129

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
           +KQ D+ S +   T  R  ++G  F     F     +      +     L G   I V  
Sbjct: 130 TKQFDVGSSSISTTDARRQNVG--FTNGYDFGFMAVVAKTDSDVKGFDDLKGDLRIGVVQ 187

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     + D +  + +K  PI F     + A  R  + DA+              D   
Sbjct: 188 GT-----VQDDYVTNTLKLEPIRFPDYATVYANVRNGQVDAWVAPSQQATGQVKEGDGTV 242

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               + +  + +  A A  + +    + ++    A++ 
Sbjct: 243 IAESVVNTQNFTAYAVA--KDNQPLIDALNSGLDAVIA 278


>gi|86360985|ref|YP_472872.1| glutamine ABC transporter, substrate binding protein [Rhizobium
           etli CFN 42]
 gi|86285087|gb|ABC94145.1| glutamine ABC transporter, substrate binding protein [Rhizobium
           etli CFN 42]
          Length = 275

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 9/216 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G       +    A+G + GFD++    + S +     K+ +          ++ +
Sbjct: 44  VISVGTMGDAKPYTFATADGQFTGFDIELFLNVVSRLGFAKDKVTFTGQEFSALLPSVAN 103

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D+       T  RE +  + F           +      I   + L G  + V  GT
Sbjct: 104 ERFDVAVAAIGTTEAREKT--VDFSDGYLAGYLSVLTP-DAAIKDAAGLKGKRLGVVQGT 160

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E+  A  F         + F       AA      DA+  D     A +     P+  
Sbjct: 161 LQEVYAAKNFGE----TDLVKFPDNNSAVAALNNGTIDAHFLDYE--AAKQYGERYPALK 214

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           V +      +P    + QG+  +   ++   +  + 
Sbjct: 215 VAVNIPSFDAPAGFVVRQGNDAFRTALNGALHDAMQ 250


>gi|300697251|ref|YP_003747912.1| high affinity periplasmic solute-binding protein; high affinity
           transporter [Ralstonia solanacearum CFBP2957]
 gi|299073975|emb|CBJ53512.1| high affinity periplasmic solute-binding protein; high affinity
           transport system [Ralstonia solanacearum CFBP2957]
          Length = 263

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 78/224 (34%), Gaps = 10/224 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  I +R  L  G+      F  +        GF+VD  +AL   +  +   ++ + + 
Sbjct: 15  TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 71

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   LQ  ++D+L    +    R   L     P     G   +  K   +   S L 
Sbjct: 72  PSNRIQFLQQGRVDVLVAAMELNPERAELLAHVPTPYYRVGGVALV-PKDSPVRQWSDLK 130

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +C+  G++    LA    A      P  F+   E   A R + C A   D + L  L
Sbjct: 131 GKDVCLSQGSSYTRPLAAEIGA-----TPKGFKSPAESLLALRGNNCAAAVHDATLLQPL 185

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             TN    ++ ++   +  +P      +G+ +    +       
Sbjct: 186 PRTNPEWKDYRVVGPDLIPAPTVIWARKGENDTVAALDRIVQGW 229


>gi|295395633|ref|ZP_06805825.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971449|gb|EFG47332.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 274

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S +  +K  G L    +     F  V    +  GFD+D  + L+  +  +   ++  P  
Sbjct: 32  SGVDLVKD-GKLTLCSDIPYEPFEYVNDQNETVGFDIDLSKKLAERLGVE-LDVKTTPFE 89

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
             +   +L + Q DI       T  R+    + F  +   D    +  K  G  S+  + 
Sbjct: 90  GIQSGSSLDTGQCDIALSGMAITDERKS--KMDFSMMYLKDNLALMAAKDSGYKSIDDVK 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              +  QA TT E    +          P  FE    +  A +  + DA   ++S +YA 
Sbjct: 148 DKKVGAQAATTGEKYAKE------KGISPTQFETGGLLTQAMQTRKIDAAIANVSTIYAA 201

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +D      ++ D  +   +  A+ +G+++  +  +     M       
Sbjct: 202 TQADD---SLTLVQDFETGEVVGAAVKKGNSKLLDEFNGMLEGMFEDGSYD 249


>gi|237799934|ref|ZP_04588395.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022789|gb|EGI02846.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 262

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 83/258 (32%), Gaps = 17/258 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++ L L I        +AS L  + + G L          +  ++ +G+++G D+ 
Sbjct: 5   KYSALTALLLGITGLAQAEDSASHLDKVLQEGQLSVCTTGDYKPYTLLREDGEYEGIDIT 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R+L+ ++      +Q++P   K     + + + DI       +L R+     +     
Sbjct: 65  MARSLAKSLGVK---VQWVPTTWKTLMPDMIAGKCDIGMGGISVSLERQKKAFFSNTLDV 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                      +    +V Q++  S+ +           + F   ++    + F   + I
Sbjct: 122 DGKIALVRCEDQASYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHDNKTI 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  + D    D S     +          P+ ++   +       A  + + D  W
Sbjct: 179 FQELLDKKADVMITDASEALYQQKRIPGLCAVNPTRYMQYGEK------AYLLPRDDMAW 232

Query: 238 YNIVSWTHYAMVTAEELG 255
            + V    +      E  
Sbjct: 233 KSYVDQWLHLSKATGEYQ 250


>gi|227879036|ref|ZP_03996929.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844250|ref|ZP_05549736.1| ABC amino acid transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256849349|ref|ZP_05554782.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|262047629|ref|ZP_06020583.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|227861370|gb|EEJ68996.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613328|gb|EEU18531.1| ABC amino acid transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256714125|gb|EEU29113.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|260572029|gb|EEX28595.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
          Length = 537

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 85/300 (28%), Gaps = 32/300 (10%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M    +   V +  L+ LF     ++       K  G LK G+      +          
Sbjct: 1   MKSRFRWMAVIMSVLLSLFIGFSLSSNQTQAAKKDSGTLKIGMEANYPPYNWTQPTKANG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVPIDGSNSYANGYDVQIAKIIGKRLHKK---VIVEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      ++   GA +  Q GT     +  
Sbjct: 118 PTAERRK--AINFSEPYRKSTFVVITNKASKYSNAKKLTDFKGAKLTAQQGTLHYDLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVIL 217
              A               +  +  +   D Y  +     +    N        ++    
Sbjct: 176 LKGAKREP----AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMAGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKRDQLMSQAIKEQPKAGNETKKENWL 291


>gi|288958192|ref|YP_003448533.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Azospirillum sp.
           B510]
 gi|288910500|dbj|BAI71989.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Azospirillum sp.
           B510]
          Length = 309

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 84/272 (30%), Gaps = 21/272 (7%)

Query: 1   MYKDFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NG 54
           M K     I   I+L  ++            L  I ++  L+          +      G
Sbjct: 41  MTKRILWVISSAILLILSAGIAVPAVATEGRLQKIAEKKQLRVCSWPDYYAISFRNPRTG 100

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             +G D +  +A +  +     ++Q +  +       L   + DI       T  R   +
Sbjct: 101 MLEGLDAELAQAFADDLG---VRLQLVESSFPRFIDDLLGDRCDIGMFAIGATPARAQHI 157

Query: 115 GLAFRPIT-YFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKY 171
              F                 +GI     L   G  I VQ  T  +       K      
Sbjct: 158 A--FSQPYLRSGIYAVTTQTNEGIRKWEDLDRAGNVIAVQKDTYMDGYARSAMKTA---- 211

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAI 230
             +   R +E +   ++ R DA+  D    Y  ++    P   +I+PD  +  +P A A+
Sbjct: 212 RIVAVTRPQEREEEVQSGRADAFLTDYP--YGQRMLAFHPWARLIVPDSPVQPTPYAYAV 269

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
             GD  W   V+    A+     L       N
Sbjct: 270 APGDAAWLERVNAFVAAIKADGRLESIAARYN 301


>gi|197295288|ref|YP_002153829.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|195944767|emb|CAR57372.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 263

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 68/201 (33%), Gaps = 21/201 (10%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSA 70
           L +L     S  A           L+ GI+      F    A G WKG+++D    L +A
Sbjct: 12  LFVLGLAPVSHAAQP--------TLRVGIDAESYPPFFSKDAGGKWKGWEIDV---LDAA 60

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 + +   +       ALQ+++ID++  +   T  R+    + F    Y     F+
Sbjct: 61  CGKLNVRCEVTDIAWDGLIPALQNRKIDVIWSSMTITGERQK--AIDFSRAYYESPTVFV 118

Query: 131 MHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             K               G+ I V+AGT     L   FK +        F++ +   A  
Sbjct: 119 GAKSDRRRVDCAVPATFKGSVIGVEAGTNFSAFLDARFKQN---AQVKAFDKFDNALADL 175

Query: 187 RAHRCDAYTGDISALYALKLT 207
            + R D          A   +
Sbjct: 176 VSGRVDYVQEGKGLFTAFLAS 196


>gi|54309302|ref|YP_130322.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Photobacterium profundum SS9]
 gi|46913738|emb|CAG20520.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Photobacterium profundum SS9]
          Length = 256

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 74/241 (30%), Gaps = 14/241 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63
             V+I  L  +        +S L  I  RG LK G               + +KG+D+D 
Sbjct: 1   MLVAIPAL--MLSQQVDAASSRLQQIIDRGVLKVGTTGDWNPMTIRDPATNFYKGYDIDI 58

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              L+  +      ++Y+    K     + + + D+ + +    + R    G +      
Sbjct: 59  TTELAKDLG---VTVEYVAAEWKNLVNGVVTDKYDM-TGSASLNMHRARVAGYSQPYFYL 114

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEE 181
                         +  +  +  S+ V +   T  E  + ++F               +E
Sbjct: 115 AFVPVIQKKNMTRFNKWNDFNNVSVTVASSLGTVQESMVKEFFPKAKHNMIDSEVRDYQE 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                 A+R             +     +      +  +   +P+A  + + D  W N +
Sbjct: 175 ----LLANRATVIVTSNVEAATITRKFSQLKIAD-VKGMRRPTPIAMLLPRDDQVWINYI 229

Query: 242 S 242
           +
Sbjct: 230 N 230


>gi|154486919|ref|ZP_02028326.1| hypothetical protein BIFADO_00752 [Bifidobacterium adolescentis
           L2-32]
 gi|154084782|gb|EDN83827.1| hypothetical protein BIFADO_00752 [Bifidobacterium adolescentis
           L2-32]
          Length = 311

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 74/222 (33%), Gaps = 13/222 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + K G L  G++T       + A+G    GFDVD  +AL+     +         N    
Sbjct: 65  VTKDGKLTVGMDTSYAPAEFLAADGKTPVGFDVDIVKALAKTFGLEADP---QTSNFDSI 121

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             ++ S + DI   +   T  R     + F  +        +     G    S L G  I
Sbjct: 122 IPSIGS-KYDIGVSSFTITPER--MKAVDFVSMFKAGSTWVVKKGNPGKIDTSDLCGLKI 178

Query: 149 CVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            VQ GTT E  +          + +    +  +   ++       + D +  D     A 
Sbjct: 179 AVQTGTTQEEEVNKGAEQCKADNKLDIQILSNKLQTDVTTNVVTGKADVFYADSP--VAG 236

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +    +   L + +  +  A AI +GD++    V     
Sbjct: 237 YAISQTDGQLEALGEDVGVTKEAVAIKKGDSDTAKAVQAAMQ 278


>gi|268318646|ref|YP_003292302.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397021|emb|CAX66035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 537

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 94/317 (29%), Gaps = 37/317 (11%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M      F ++L LI+     FS N++     KK   LK G+      +       ANG 
Sbjct: 1   MKSKIRWFGALLALILSLVIGFSFNSTQTEAAKKEAPLKIGMEANYPPYNWTQTTDANGA 60

Query: 56  W---------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                      G+DV   + +   +     K+            AL S +ID++      
Sbjct: 61  VPIDGSKQYANGYDVQIAKIIGKKL---HRKVVVEKTEWDGLLPALTSGKIDLIIAGMSP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R     + F           I +   K      ++   GA +  Q GT     +   
Sbjct: 118 TAERRK--AINFSEPYRKSTFVVITNKDGKFAQAKGLNDFKGAKLTAQQGTLHYDLIKQL 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A               +  + ++   D Y  +     + K  N        ++     
Sbjct: 176 HGAKREP----AMRSFSAMRQSLQSGTIDGYVAEDIEYQSYKTVNPNIVAVNLNKMQGFK 231

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP------D 272
                S  +  + +G+ E  + V+     +   +   +  + + +  +  ++        
Sbjct: 232 VSHDDSITSIGVKKGNNELLDQVNSILKGVSNKKRDQLMAQAVKEQPQAGSSKKENWFMS 291

Query: 273 VQRFLGIDKSSNIGEAL 289
           + R  G      +G  L
Sbjct: 292 IMRRYGSMILGGVGMTL 308


>gi|322377829|ref|ZP_08052318.1| putative amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
 gi|321281252|gb|EFX58263.1| putative amino acid ABC transporter, amino acid-binding protein
           [Streptococcus sp. M334]
          Length = 271

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +L +I         N S   +   +  +       +  F      G+  GFD
Sbjct: 6   MKK--FSLLLAIIPFLVACG--NQSTPKETNSQKAIVVATAGDVPPFDYED-KGNLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 61  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 117 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGED 176

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 177 IGKRILDLSNGEFDFLV 193


>gi|315640083|ref|ZP_07895208.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484211|gb|EFU74682.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 536

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 89/288 (30%), Gaps = 34/288 (11%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK----------AN 53
             FV +L L+ L   S   +     D       + G+      F   +          ++
Sbjct: 19  SLFVGLLFLLALIVPSTYADEQTPAD-----EFRVGMEAAYAPFNWTQTSPGAHTVELSS 73

Query: 54  GDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
             +  G+DV   + ++  +      +  +P        ALQS +ID +      T  R+ 
Sbjct: 74  QKYVGGYDVQIAQKIADKLGKK---LVIVPTQWDGLVPALQSGKIDAIIAGMSPTEERKK 130

Query: 113 SLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
              + F    Y      +++   K     S+  L+GA I  Q  T     +         
Sbjct: 131 --EIDFTDAYYESQLVVVVNKDGKYANAKSIDDLAGAKITAQLNTFHYSVIDQIPNVDKQ 188

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS----- 224
           +      +    +  A  +   D Y  +          N          +   ++     
Sbjct: 189 QAQ----KDFSSMRVALASGVIDGYVSERPEGVTATNVNKDFKMLEFSKENGFQTNAEDV 244

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
            +A  + +GD++    V+     + ++E   +  + I +    +   D
Sbjct: 245 QVAVGMRKGDSD-VEKVNEILATISSSERTKLMDQAIEEQPTASDEQD 291


>gi|86158524|ref|YP_465309.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775035|gb|ABC81872.1| amino acid-binding domain sensor histidine kinase [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 575

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 12/206 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G +     +  +  NG   GF+VD  RA+   +      +++   +       L 
Sbjct: 30  KRVVVGADRDYPPYEFLDENGQPAGFNVDLTRAIGEVMG---FTVEFRFGDWAGIRAGLA 86

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
              ID+L      +   E +  L F            + K     +    L+G  + V  
Sbjct: 87  DGSIDVLQG---ISWSEERARRLDFAAPHAIVHHAIFVRKDGPRPASLDALAGREVVVFG 143

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G   +  +    KA       I  +   +      + + D     +     L+      +
Sbjct: 144 GGIMDEEITRAGKAA----EVIRTQTPADALRLLASGQHDCVVLALLPGIYLQRQLG-LT 198

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWY 238
               + + +       A+ +GD E  
Sbjct: 199 NIEPVGEPVRAERYGYAVRKGDRELL 224


>gi|92112291|ref|YP_572219.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91795381|gb|ABE57520.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 307

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 13/254 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++      L   S    A+ L +I++RG+++         F  +  NG+ KGF+ D    
Sbjct: 29  LAATVAGALMSLSLPALAADLAEIQERGYMEVATEDNYAPFNFI-ENGEAKGFNADMLEE 87

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L         +I+   L       A+ + Q D+       +  R       + P      
Sbjct: 88  LRD---YADFEIRQEILPWTGLLAAVSNDQYDMALTGASVSDERLRV--FNYTPPYASAQ 142

Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGT---TTELTLADYFKAH-NMKYHPIVFERVEE 181
             +I       + SV+ LSG ++ VQAG+   +    L    +         + +E   E
Sbjct: 143 HFYIKRADDDSLQSVADLSGKTLGVQAGSVLLSRLPELEQMLEEQDGELGEVVEYESYPE 202

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             A     R D      SA+    L   +P        +     ++  I +   E  + +
Sbjct: 203 AFADLANGRLDYVID--SAVPVNTLVASKPEIFAKGQAVSGAGYVSWPIPKDSPELLDYM 260

Query: 242 SWTHYAMVTAEELG 255
           +     M  +  L 
Sbjct: 261 TEFLAHMQESGRLA 274


>gi|296156737|ref|ZP_06839575.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295893336|gb|EFG73116.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 283

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 75/257 (29%), Gaps = 20/257 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M     + F  + L   +              L DIK+RG L  G       F  V  NG
Sbjct: 1   MKQLTRRSFLKTTLASGVALALPKLALAEGGTLADIKQRGKLVVGTEAAYEPFEFV-ENG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+  D    +++ +     ++    L  +     L + + D ++ +   T  R    
Sbjct: 60  QIVGYGHDVLELMAAKLGVKLEQMN---LPFQGLLPGLMTHKFDFVATSVGITPERAKRF 116

Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-- 171
              F           ++      I+    + G +I  Q G++++    ++ K    K   
Sbjct: 117 A--FSEPVGVVRSVLLVRADDKSINRDLDIGGKTIGTQMGSSSQPVADEFEKELKEKTGK 174

Query: 172 ---HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                 +F+   ++  A      D      +                I   I     LA 
Sbjct: 175 GYAGTKLFQAYPDVSNALANRTVDVALMPSNIAAVQMKRQPN--AFRIAGTIGQPKLLAW 232

Query: 229 AIIQGDTEWYNIVSWTH 245
                D E    ++ + 
Sbjct: 233 VANPNDLEIRKFINDSL 249


>gi|297194204|ref|ZP_06911602.1| ABC transporter substrate-binding protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722541|gb|EDY66449.1| ABC transporter substrate-binding protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 293

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 18/266 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M +   +           + +       +   L  +K +G ++ GI    V +  V   G
Sbjct: 10  MSRRALLLGTAAAGALTVAGAAGCSRVPSGDALARLKSQGTVRLGIAGE-VPYGYVDEQG 68

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ G   +  R +   +      +Q +  +       L S+Q D++S        R    
Sbjct: 69  EFTGEAPELARVIFQRLG--IESVQPVATDFASLIPGLNSQQFDVVSAGMYINKER--CE 124

Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            + F    Y     FI+ K     + S   +  A      G T    +A    A   +  
Sbjct: 125 QVIFADPEYQMLDSFIVRKGNPKNLRSYEDVVKAKAKFSTG-TGYAEIAYAVAAGIPEKD 183

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----AP 228
            ++ +       A  + R D + G       +   + R         ++           
Sbjct: 184 IVILQDQVAGLNAVESGRVDVFAGTALTAREVVRKSTRAEATEPFAAVVDGEKQIDGGGF 243

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEEL 254
           A    DTE  +  +   + M  + EL
Sbjct: 244 AFRPTDTELRDAFNVEIHKMKKSGEL 269


>gi|254184007|ref|ZP_04890598.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1655]
 gi|184214539|gb|EDU11582.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1655]
          Length = 264

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 87  RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLEPTPASLRGKRVGVLQG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 145 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPDAKG 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 203 FAFVGPPVRDDKILGSGIAFGLRKGDDALKARLNAAI 239


>gi|190404351|ref|YP_001960982.1| rcorf7 [Agrobacterium rhizogenes]
 gi|158322147|gb|ABW33564.1| rcorf7 [Agrobacterium rhizogenes]
          Length = 299

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 67/224 (29%), Gaps = 15/224 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G +      G      +  +G   KGF+VD   A+  A+      + Y      
Sbjct: 51  EKLAKAGKIVMCTELGNPPGGFLDEDGVTPKGFNVDVMSAIGPAMGIKTEVVHY---PFA 107

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLS 144
             F AL + + D +  N   +L R       F      +  G ++ K     I +   LS
Sbjct: 108 SIFAALDTGKCDAVMSNNSKSLAR--VAKYNFV-EYVRERMGLLVPKGNPLNIKTYEDLS 164

Query: 145 GASICVQAGTTTELTLADYF----KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           G  + V   +T E  L +                 + +           R DA+  D   
Sbjct: 165 GHRVAVLVSSTNERLLKEANTKVSAEGKPPIEIQSYPQNTVTFRQLDLKRVDAFVSDAMT 224

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           L   K       E   LP  I    +   + + D      V   
Sbjct: 225 LSYFKKLTGDKYEIGGLP--IDPLTIGIVLRKDDPALQEAVRKA 266


>gi|300173758|ref|YP_003772924.1| glutamine-binding protein/glutamine transport system permease
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299888137|emb|CBL92105.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 477

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 15/249 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   + +  L+  F    + NA                +     F     N ++ G +
Sbjct: 1   MFKKCLLGLATLVSSFAFVSTVNA-------AEPHYTITTDATYAPFTFQDKNSNYVGIE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  + ++     +       P++       + + Q D +      T  R+      F  
Sbjct: 54  QDTMKVIAKR---ENFTYTMRPMSYNSAAQLVSNGQADGIIAGMSITPERKEV--YDFST 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G  +I+ K   I S+S L G ++ ++ GT            +  K     F   +
Sbjct: 109 PYYKTGVAWIVGKNSKIKSLSDLKGQTVALKTGTAASEYGKSLQTEYGFK--VKYFNDTD 166

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +          A   D+  +    + N    + +      +      A+ +G  +    
Sbjct: 167 TMYNDVVVGNSAATFEDMPVIQ-YAIKNGMALKVMNANKPGNAGSYGFAVEKGKNKILLA 225

Query: 241 VSWTHYAMV 249
                +A +
Sbjct: 226 SFNRGFAAI 234


>gi|16119712|ref|NP_396418.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15162296|gb|AAK90859.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 269

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++  + +  ++ +      G + ++G L  G+      F   K +    GFD
Sbjct: 1   MLKTILAALIVPLGIAASASAAELPGTGLV-EKGALTYGVAATFAPFEFQKGD-QLTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   ALS  +  +   +    +  K    AL   +ID+++        R  S  + F P
Sbjct: 59  IDLISALSKKLKAEAKPMN---MEFKGLIPALIGGRIDLINSAMYINPAR--SEQVDFIP 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLAD---YFKAHN-MKYHPI 174
                    +        +     L G ++ V  G   E          KA        +
Sbjct: 114 YLKIGNMVLVQAGNPKKITGRDDSLCGKTVSVTLGGIQESQARADDTRCKAKGLEGVKVL 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQG 233
            F   ++     R  R DA          L+ +   P  +  + +    +  +  A  +G
Sbjct: 174 TFPTAQDSALTLRQGRADATFDSTPGAVVLQSSV--PGVYETVGEEFESNTSIGMATRKG 231

Query: 234 DTEWYNIVSWTH 245
           D      +    
Sbjct: 232 DAAVQKAIKDAL 243


>gi|23012315|ref|ZP_00052431.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 272

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 80/246 (32%), Gaps = 16/246 (6%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           MY+      +++  +    +  + +   L  I++ G ++  I       +      G  +
Sbjct: 1   MYRHACLVTAVIAALAGIPSFATASGGKLAKIRQTGEVRVCIWPDYYSISYRNTRTGKLE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D+D     +  +     +++++  + K     L S + DI       T   +    LA
Sbjct: 61  GIDIDMAHEFAKDLG---VQVRFIDSSFKTLVEDLLSDKCDISMHAVAITP--DRQEKLA 115

Query: 118 FRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           F       G   I  K   +    +     G  +   AGT     + +  K        +
Sbjct: 116 FTRPHLRSGIFAITSKTNPVVKEWADIDRDGVVVAAAAGTFMVGVMKNELKQA----RLL 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                E  +    + R D +  D      +   +D        P  ++ SP A A+  GD
Sbjct: 172 EVATPEAREQEVMSGRADLFVTDYPFSRKMLARHDWAKLLTP-PTPLAPSPYAYAMAPGD 230

Query: 235 TEWYNI 240
            EW   
Sbjct: 231 REWLET 236


>gi|134281649|ref|ZP_01768357.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 305]
 gi|167904831|ref|ZP_02492036.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|134247316|gb|EBA47402.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 305]
          Length = 264

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 87  RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLEPTPASLKGKRVGVLQG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 145 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPDAKG 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 203 FAFVGPPVRDDKILGSGIAFGLRKGDDALKARLNAAI 239


>gi|328881412|emb|CCA54651.1| Periplasmic binding protein [Streptomyces venezuelae ATCC 10712]
          Length = 326

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 14/198 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGL-VGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +   ++KRG L  G++       A     +    G +VD    ++ A+   P   
Sbjct: 61  ALAAKLPEAVRKRGTLVLGVSATSNPPLAFHATDDRTLIGVEVDLATLVADALGLKPE-- 118

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136
            + P++ +  F+ L S + D +  N   T  R+      F      D   F   K     
Sbjct: 119 -FNPVSWENLFVGLDSGKYDAVFSNVTVTEERK--DKYDFA-TYRLDDLAFEAKKGSGWK 174

Query: 137 ISSVSQLSGASICVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           +     ++G  I V +GT  E  L D+     KA         F+   +   A ++ R D
Sbjct: 175 VKGPEDVAGKKIAVGSGTNQEKILVDWSAQNEKAGRKPVDITYFQNTSDYYLALQSGRID 234

Query: 193 AYTGDISALYALKLTNDR 210
            Y G         L+  +
Sbjct: 235 GYLGPNPVAAYHVLSAGQ 252


>gi|313888583|ref|ZP_07822248.1| ABC transporter, substrate-binding protein, family 3 [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312845312|gb|EFR32708.1| ABC transporter, substrate-binding protein, family 3 [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 284

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 84/256 (32%), Gaps = 27/256 (10%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGF---------AEVKANGDWK- 57
           +I   ++L   +   +            L+ G+      F             A G +  
Sbjct: 15  AIAGTMLLTACNPKGDGGSAAAPADSDTLRVGMECDYAPFNWTQTGEEHGYKIAAGGYAG 74

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DV+  + ++ ++      ++ +         A+ S +ID++      T  R+ +  L 
Sbjct: 75  GYDVEIAKKIAESMNKK---LEIVKTEWNGLTPAITSGKIDLIIAGMSPTAERKET--LD 129

Query: 118 FRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           F    Y      ++ K        S++   GA+I  Q  T     +      +       
Sbjct: 130 FSDTYYTSDLVIVVKKDSPYVNAKSINDFKGANITGQLNTFHYDVIDQMEGVNKST---- 185

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPA 229
             E    +  A R+ + D Y  +     +    ND  +     E       +  + +A  
Sbjct: 186 ALETFPAMIVALRSGKIDGYVSERPGALSAVAANDDLTFVEFSEGNGFKTSVEDTSIAVG 245

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+TE  + V+   
Sbjct: 246 VKEGNTELLDKVNAAL 261


>gi|306823389|ref|ZP_07456764.1| ABC superfamily ATP binding cassette transporter, solute-binding
           protein [Bifidobacterium dentium ATCC 27679]
 gi|309802655|ref|ZP_07696759.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
 gi|304553096|gb|EFM41008.1| ABC superfamily ATP binding cassette transporter, solute-binding
           protein [Bifidobacterium dentium ATCC 27679]
 gi|308220719|gb|EFO77027.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
          Length = 323

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 12/218 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L  G+            +G    G+DVD  +A++  +   P   + +         
Sbjct: 82  KDGELSSGMELSYAPAEFYAEDGKTPVGYDVDMTKAIAQVLGLKP---KIVSSMFDTIIP 138

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ++ + + D+   +   T  R     + F           +          S + GA I V
Sbjct: 139 SIGT-KYDLGITSMTITKER--MESVDFVSYYRAGSTWAVQKGNPKKLDASDMCGAKIAV 195

Query: 151 QAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           Q GTT E    D  K    + K   + ++R  E   A    + DA+  D           
Sbjct: 196 QTGTTQEDDANDIAKGCKADNKAEVLSYKRQAEAATAVATGKADAFYADSPVAGYAISQT 255

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D       L D+   +    AI +G+ +    V     
Sbjct: 256 DG---LEALGDVEGVAKQGIAIEKGNEKLDEAVQKALQ 290


>gi|306832080|ref|ZP_07465234.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425519|gb|EFM28637.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 267

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 15/198 (7%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   + +  L+    +     A                   +  F+     G   G+
Sbjct: 1   MKMKKVLLGLAVLLSASLSVCVEAAD--------KKAVVATAGDIKPFSYQNKKGQLTGY 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+   +A S  I  +  KI +        F+ L S    + + N  +T  R  +    + 
Sbjct: 53  DIQVIKAASKYI--NGYKIGFKKTAWDSIFVGLDSDIYQVAANNLSYTEER--ANKYLYS 108

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--E 177
                +    ++ K   I+S+  + G +     GT+T   + D+   H+     I +  E
Sbjct: 109 VPIAKNPLVLVVKKGSKITSLDDIGGKTTQDDTGTSTAKFVDDWNSQHSDNPSTIDYSGE 168

Query: 178 RVEEIDAAYRAHRCDAYT 195
            V +          D   
Sbjct: 169 DVTKRLLDLDDGEFDYLI 186


>gi|126657821|ref|ZP_01728974.1| hypothetical protein CY0110_13191 [Cyanothece sp. CCY0110]
 gi|126620761|gb|EAZ91477.1| hypothetical protein CY0110_13191 [Cyanothece sp. CCY0110]
          Length = 299

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 82/256 (32%), Gaps = 12/256 (4%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K  F    V++L L      S++   S+L  I + G L+ GI    V F     NG+ 
Sbjct: 1   MKKSVFYLSFVNLLLLFSWVLPSYTQEMSVLEKIDQTGLLEVGIREDAVPFGYRDINGNL 60

Query: 57  KGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G  +D        L   +      ++        RF     + +DI         + E 
Sbjct: 61  EGLCLDLIALLREQLKQKLNKKVIALKLYKSTLYNRFELASDRIVDIECGPNTIREVPEY 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +  +               K K I+    L    I V   TT E  +A+ +   N+   
Sbjct: 121 QIQFSQPFFLTGTQLLVKTEKAKRINPNRSLDNIDIGVLRNTTNEQLMAERYPLANL-VQ 179

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYA--LKLTNDRPSEHVILPD-IISKSPLAPA 229
                       A + ++ DA+  D   L             ++ ++P   I        
Sbjct: 180 FQGVTGRSRGIQALQGNKIDAFASDGILLVGEAQIQNLRLGPDYTLVPTNPIDCEEYGLI 239

Query: 230 IIQGDTEWYNIVSWTH 245
           +   + EW + V+   
Sbjct: 240 LPDNNPEWLSFVNSVI 255


>gi|255348746|ref|ZP_05380753.1| arginine binding protein [Chlamydia trachomatis 70]
 gi|255503286|ref|ZP_05381676.1| arginine binding protein [Chlamydia trachomatis 70s]
          Length = 257

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 70/251 (27%), Gaps = 24/251 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56
            K +   +  +     T           +K+RG         G N     F  V   G+ 
Sbjct: 6   KKTWIAFLAVVCSFCLTGC---------LKERGDSNSEKFIVGTNATYPPFEFVDKRGEV 56

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFD+D  R +S+ +       ++   +     L L+  +ID +      T  R   + +
Sbjct: 57  VGFDIDLAREISNKLGKTLDVREF---SFDALILNLKQHRIDAVITGMSITPSRLKEILM 113

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                        ++ K +    +      S+ VQ GT  E  L         + H   F
Sbjct: 114 I-PYYGEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQEAYLQSL-----SEVHIRSF 167

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDT 235
           +   E+       +      + S    +        +  + LP+          +     
Sbjct: 168 DSTLEVLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPEDQLVLGYGIGVASDRP 227

Query: 236 EWYNIVSWTHY 246
                +     
Sbjct: 228 ALALEIEAAVQ 238


>gi|330969171|gb|EGH69237.1| prephenate dehydratase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 263

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 82/262 (31%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + ++  L++              L  + + G L          ++ ++ +G+++G
Sbjct: 1   MMNLKYSALTALLLGITGMAQAQDYTSHLDKVLQAGQLAVCTTGDYKPYSLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          +    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCADQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQDLLDKKADVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W   V    +      E  
Sbjct: 229 DVAWKAYVDQWLHLSKATGEYQ 250


>gi|190895201|ref|YP_001985494.1| nopaline ABC transporter substrate-binding protein [Rhizobium etli
           CIAT 652]
 gi|190700862|gb|ACE94944.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           CIAT 652]
          Length = 281

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 79/275 (28%), Gaps = 43/275 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +S+  L+I    + +           R  L          +  + A+G   GFD
Sbjct: 1   MKRIIALSLCVLVICANNAVA---------MDRKTLTIASEGASPPWNAIAADGQLAGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R L   +  +     ++P +      AL   + D +      T  R+ S+   F  
Sbjct: 52  VDVGRDLCRRMNVE---CTFVPQDWDGIIPALTVGKFDAIMSGMAITEKRKKSIA--FST 106

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                    ++ K   + +                          L+G ++ V   + +E
Sbjct: 107 PYAGGFNQLVIRKDLNLPTTDTSAKLDLTSIDAEKRALIDQLQAALTGKTLGVLRSSNSE 166

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L + F           ++  + +     A R D    D         +ND     +  
Sbjct: 167 AVLNELF---GKVATIRSYDSQDNMHLDLVAERIDGGLADYFTWKTFLDSNDGGIAMLYG 223

Query: 218 PDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           P++        +   + Q D E          A  
Sbjct: 224 PELSGGLWGPGVGVGLRQDDHELIAAFDSAIEAAT 258


>gi|207724367|ref|YP_002254764.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           MolK2]
 gi|206589585|emb|CAQ36546.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           MolK2]
          Length = 290

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 78/224 (34%), Gaps = 10/224 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  I +R  L  G+      F  +        GF+VD  +AL   +  +   ++ + + 
Sbjct: 42  TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 98

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   LQ  ++D+L    +    R   L     P     G   +  K   +   S L 
Sbjct: 99  PSNRIQLLQQGRVDLLVAAMELNPERAELLAHVPTPYYRVGGVALV-PKDSPVRQWSDLK 157

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +C+  G++    LA    A      P  F+   E   A R + C A   D + L  L
Sbjct: 158 GKDVCLSQGSSYTRPLAAEIGA-----TPKGFKSPAESLLALRGNNCVAAVHDATLLQPL 212

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             TN    ++ ++   +  +P      +G+ +    +       
Sbjct: 213 PRTNPEWKDYRVVGPDLIPAPTVIWARKGENDTVAALDRIVQGW 256


>gi|171743321|ref|ZP_02919128.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC
           27678]
 gi|306823266|ref|ZP_07456642.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309801894|ref|ZP_07696009.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278935|gb|EDT46596.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC
           27678]
 gi|304553898|gb|EFM41809.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308221450|gb|EFO77747.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 514

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 89/290 (30%), Gaps = 36/290 (12%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
              K G +T    F      G   G D++  ++++     +  KI+           AL 
Sbjct: 51  KTYKIGTDTTFAPFEYQ-EKGKMVGIDMELIQSIAKK---EGFKIEIQASGFNAALQALS 106

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152
           S Q+D++      T  R+ +    F    +  G    +      I S   L   ++  + 
Sbjct: 107 SNQVDLVIAGMSITDERKAT--YDFSDPYFQSGIQMAVAADNDDIKSYKDLDDKTVVAKT 164

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E    ++ K +         ++   +    ++    A   D   L           
Sbjct: 165 GSEGEAYAKEHAKEYGY--TVTSVDQSSTMYEMVKSGNAVAVFDDYPVLAYGVSQ----- 217

Query: 213 EHVILPDIISKSP---LAPAIIQG---------DTEWYNIVSWTHYAMVT-----AEELG 255
            H  L  +  K P      A+ +G         D     ++S   Y  +      AE   
Sbjct: 218 -HNGLKIVTPKVPHGEYGMAVNKGKNADLLAAIDDGLAQLISSGEYETIIAKYLGAEGAK 276

Query: 256 ITQKNINQVSKDTTNPDVQR----FLGIDKSSNIGEALGLTKDWTYRIIR 301
              K I+ +  D       +    FLG+ K S     +GL       +I 
Sbjct: 277 AQVKAISGMVTDNDATATAKAKVGFLGLAKQSLPALMIGLKNTLFITVIS 326


>gi|331015167|gb|EGH95223.1| cyclohexadienyl dehydratase, putative [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 263

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 82/258 (31%), Gaps = 17/258 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    S L L +        +AS L  + + G L          ++ ++ + + +G D+ 
Sbjct: 5   KYSVFSALLLGMAAMAQAQESASHLDKVLQTGQLAVCTTGDYKPYSLLREDDEHEGIDIT 64

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R+L+ ++    + +Q++P   K     + + + DI       +L R+     +     
Sbjct: 65  MARSLAKSLG---ATVQWVPTTWKTLLPDMVAGKCDIGMGGISVSLERQKKAFFSSTLDV 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                      +    +V Q++  S+ +           + F   ++    + F   + I
Sbjct: 122 DGKIPLVRCEDQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPNASLAFHDNKTI 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  + D    D S     +          P+ ++   +       A  + + D  W
Sbjct: 179 FQELLDKKADVMITDASEALYQQKRMPGLCAVNPTHYMQYGEK------AYLLPRDDVTW 232

Query: 238 YNIVSWTHYAMVTAEELG 255
            + V    +      E  
Sbjct: 233 KSYVDQWLHLSKATGEYQ 250


>gi|168485732|ref|ZP_02710240.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC1087-00]
 gi|183571092|gb|EDT91620.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC1087-00]
          Length = 266

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACENQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATINFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|119945611|ref|YP_943291.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
 gi|119864215|gb|ABM03692.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 252

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 24/254 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    K    + + +  L                    +K G++   V F   + +   +
Sbjct: 1   MKHPIKLIIAAAVAVSSLITVPAFAKE----------TVKVGMSGNYVPFTFSEKD-VLQ 49

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+VD    ++     D   ++++  +    F  L++  ID +S     T  R      A
Sbjct: 50  GFEVDLWNEIALRADYD---VKFVLSSFSGLFGMLEAGHIDTISNQITITPAR--LEQYA 104

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F      DG   +  K ++ I+SV+ L G  + V  G+  E TL    +A + K    + 
Sbjct: 105 FTTPYVVDGVQIVTKKGREDINSVADLKGKKVAVNLGSNFEETL----RALDPKQEIDII 160

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                        R DA+  D     AL   +  P +    P    ++ +          
Sbjct: 161 TYDTGFVQDVVIGRTDAFIMDRVGSAALIKKSGLPLKLAGQPFEKIENAMPFLNKPEQLA 220

Query: 237 WYNIVSWTHYAMVT 250
             + V+    +M  
Sbjct: 221 IRDKVNAALLSMKN 234


>gi|15900528|ref|NP_345132.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae TIGR4]
 gi|111657231|ref|ZP_01408002.1| hypothetical protein SpneT_02001565 [Streptococcus pneumoniae
           TIGR4]
 gi|149005730|ref|ZP_01829469.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|168490492|ref|ZP_02714635.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC0288-04]
 gi|303260112|ref|ZP_07346085.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP-BS293]
 gi|303261296|ref|ZP_07347244.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP14-BS292]
 gi|303263961|ref|ZP_07349882.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae BS397]
 gi|303265951|ref|ZP_07351847.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae BS457]
 gi|303268334|ref|ZP_07354131.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae BS458]
 gi|307126818|ref|YP_003878849.1| glutamine ABC transporter substrate-binding protein/Major cell
           binding factor [Streptococcus pneumoniae 670-6B]
 gi|14972096|gb|AAK74772.1| putative amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae TIGR4]
 gi|147762670|gb|EDK69630.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|183574871|gb|EDT95399.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae CDC0288-04]
 gi|302637430|gb|EFL67917.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638807|gb|EFL69269.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP-BS293]
 gi|302642172|gb|EFL72522.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae BS458]
 gi|302644535|gb|EFL74786.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae BS457]
 gi|302646366|gb|EFL76592.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae BS397]
 gi|306483880|gb|ADM90749.1| ABC transporter substrate-binding protein - glutamine
           transport/Major cell binding factor [Streptococcus
           pneumoniae 670-6B]
 gi|332077048|gb|EGI87510.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA17545]
          Length = 266

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACENQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATINFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|239817728|ref|YP_002946638.1| prephenate dehydratase [Variovorax paradoxus S110]
 gi|239804305|gb|ACS21372.1| Prephenate dehydratase [Variovorax paradoxus S110]
          Length = 266

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 74/263 (28%), Gaps = 16/263 (6%)

Query: 6   FVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
                    +  +  +         S L  ++K   L+         F+  KA+G ++G 
Sbjct: 9   LTLTAATAAVLLSGCAMAPAAPAGGSHLDAVQKAAVLRICTPGDYKPFSFQKADGAFEGI 68

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD     S+++   P    ++          L + + DI       T   +      F 
Sbjct: 69  DVDLMAGFSASLGAKPE---WVKTTWANLLPDLGAGKCDIAVGGVSVTT--DRQKRAFFS 123

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +G+  I          SV+ +   S  V            + +A+  +    +  
Sbjct: 124 APYMVNGKAPIARCADVAKYQSVADIDKPSTRVIFNPGGSN--ERFARANFKQAKLTLHG 181

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               I     A+R D +  + SA    +         +     +    +A  + + D  +
Sbjct: 182 ENVTIFDEILANRADVFVTE-SAEAITQQKLKPGLCAINPDKPLQYGEMAWMLPRDDVAF 240

Query: 238 YNIVSWTHYAMVTAEELGITQKN 260
              V    +      +       
Sbjct: 241 KAYVDQWLHLQQAGGDFQRVMDR 263


>gi|148988986|ref|ZP_01820386.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP6-BS73]
 gi|147925483|gb|EDK76560.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Streptococcus pneumoniae SP6-BS73]
          Length = 266

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKETSAQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    + ++ + H      I F    
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINNWNQKHTDNPATIDFSGEN 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|111022110|ref|YP_705082.1| amino acid transporter [Rhodococcus jostii RHA1]
 gi|110821640|gb|ABG96924.1| amino acid transporter [Rhodococcus jostii RHA1]
          Length = 241

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 68/210 (32%), Gaps = 5/210 (2%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G       F      G   GFDV+F RA++  +  +   + Y   +    F AL   
Sbjct: 8   LRVGSALPDPPFEFRDG-GAPAGFDVEFTRAVAQVLGLEWLLVPYRGTDFNGIFDALADG 66

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D ++  T  T  R          +           +  G+  V  L G ++ VQ G T
Sbjct: 67  EFDCIASGTTVTPQRRARADFCAPYLVSGQSLAVDTSRHPGVRGVDDLGGLTVGVQHGNT 126

Query: 156 TELTLADYFKA-HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           ++  +                ++R+ +      +  CDA          L          
Sbjct: 127 SQPIVEGLVAEGRAGAIRVYAYDRIGQALDDLSSGGCDAVMKLAPV---LTWLVRDRPHV 183

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            ++   IS+  +A A+  GD      +   
Sbjct: 184 EVVERGISREEIAVAVRTGDDALRERIESA 213


>gi|15893407|ref|NP_346756.1| glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum ATCC 824]
 gi|15022937|gb|AAK78096.1|AE007524_1 Glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum ATCC 824]
          Length = 477

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 65/201 (32%), Gaps = 9/201 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               +     F     + D++G D+D   A++     +       P+N      ALQS Q
Sbjct: 29  TIATDATYAPFEFRTGS-DYQGIDIDILSAIAKK---ENFTYDLKPMNFNGIIPALQSNQ 84

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTT 155
           +D           R+ +  L F    Y  G   +       + +++ + G +  ++ GT 
Sbjct: 85  VDGSVSGMSINDERKKT--LDFSNSYYDSGLCVVAKSDNKSVKTINDIKGKTAALKKGTA 142

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
                    + +        F+    +  A      D    D   +      +      +
Sbjct: 143 GAAYAEANKEKYG--LTLKYFDDSPSMFQAVMNGNADITLEDYPVIAYKISIDKNSGLKI 200

Query: 216 ILPDIISKSPLAPAIIQGDTE 236
           +  + I+ SP   A+ +G  +
Sbjct: 201 VGDEKITTSPYGFAVKKGTNK 221


>gi|293567831|ref|ZP_06679172.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1071]
 gi|291589416|gb|EFF21223.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1071]
          Length = 530

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 82/292 (28%), Gaps = 30/292 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN---- 53
           M K+     +    +F      + +   +       + G+  G   F        N    
Sbjct: 1   MKKNMVSVAVLFAFVFSLFSVGSLANADEKTPSDEFRVGMEAGYAPFNWSQQTDENDALP 60

Query: 54  --GDWK---GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             G      G+DV   + ++  +      +  +         ALQS +ID +      T 
Sbjct: 61  IQGQNSYAGGYDVQIAKKVADGLGKK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTA 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++ K        S++ LSGA I  Q  T     +     
Sbjct: 118 ERRK--EIDFTDPYYESQLVVVVQKDSKYAKAKSLADLSGAKITAQLNTFHYTVIDQIPD 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKS 224
               +      +    +  A  +   D Y  +          N           D    +
Sbjct: 176 VQKQQ----AMDNFSAMRTALASGMIDGYVSERPEGVTATSVNKDLEMLEFSGADGFQTN 231

Query: 225 P----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           P    ++  + +GD +    V+     +   E   I  + +      T + +
Sbjct: 232 PEDVQISVGMRKGDPDIQK-VNQILSGISNDERTKIMDQAVKDQPAATDSEE 282


>gi|283455571|ref|YP_003360135.1| ABC transporter solute binding protein [Bifidobacterium dentium
           Bd1]
 gi|283102205|gb|ADB09311.1| Solute-binding protein of ABC transporter system [Bifidobacterium
           dentium Bd1]
          Length = 308

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 12/218 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L  G+            +G    G+DVD  +A++  +   P   + +         
Sbjct: 67  KDGELSSGMELSYAPAEFYAEDGKTPVGYDVDMTKAIAQVLGLKP---KIVSSMFDTIIP 123

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ++ + + D+   +   T  R     + F           +          S + GA I V
Sbjct: 124 SIGT-KYDLGITSMTITKER--MESVDFVSYYRAGSTWAVQKGNPKKLDASDMCGAKIAV 180

Query: 151 QAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           Q GTT E    D  K    + K   + ++R  E   A    + DA+  D           
Sbjct: 181 QTGTTQEDDANDIAKGCKADNKAEVLSYKRQAEAATAVATGKADAFYADSPVAGYAISQT 240

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D       L D+   +    AI +G+ +    V     
Sbjct: 241 DG---LEALGDVEGVAKQGIAIEKGNEKLDEAVQKALQ 275


>gi|241205169|ref|YP_002976265.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240859059|gb|ACS56726.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 292

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 62/213 (29%), Gaps = 15/213 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +      L        S   NA  L    ++G L       + G       G   G+D +
Sbjct: 7   RRMVTCALLAGSFMSLSSIANAFELA---EQGKLTVAFTGDMPGSGWQD--GKLVGYDGE 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +           +       ++QS ++D++     WT  R   + L+     
Sbjct: 62  IMQRIAEKLGLKIQPAL---MEWSGTIASVQSGRVDVMLGTMGWTEKRTKIMTLSEPIHY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G +   K     +S L G  I    G +    L              +++  +  
Sbjct: 119 --FKNGIMQSTKTSWDKLSDLEGKKIGTITGFSFVPELKSI-----KDLQLSLYDTSDAA 171

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
                A R DA  GD   +      N   + H 
Sbjct: 172 VRDLIAGRIDAVIGDPPVISYAIKQNPDWNMHF 204


>gi|83747214|ref|ZP_00944257.1| Hypothetical Protein RRSL_03006 [Ralstonia solanacearum UW551]
 gi|207739076|ref|YP_002257469.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
 gi|83726189|gb|EAP73324.1| Hypothetical Protein RRSL_03006 [Ralstonia solanacearum UW551]
 gi|206592448|emb|CAQ59354.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum
           IPO1609]
          Length = 290

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 78/224 (34%), Gaps = 10/224 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  I +R  L  G+      F  +        GF+VD  +AL   +  +   ++ + + 
Sbjct: 42  TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 98

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   LQ  ++D+L    +    R   L     P     G   +  K   +   S L 
Sbjct: 99  PSNRIQFLQQGRVDLLVAAMELNPERAELLAHVPTPYYRVGGVALV-PKDSPVRQWSDLK 157

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  +C+  G++    LA    A      P  F+   E   A R + C A   D + L  L
Sbjct: 158 GKDVCLSQGSSYTRPLAAEIGA-----TPKGFKSPAESLLALRGNNCAAAVHDATLLQPL 212

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             TN    ++ ++   +  +P      +G+ +    +       
Sbjct: 213 PRTNPEWKDYRVVGPDLIPAPTVIWARKGENDTVAALDRIVQGW 256


>gi|260891034|ref|ZP_05902297.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Leptotrichia hofstadii F0254]
 gi|260859061|gb|EEX73561.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Leptotrichia hofstadii F0254]
          Length = 260

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 11/218 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           KKR  +K G +     F+     +G   G+DV+  + +   I  D   I++  +     F
Sbjct: 28  KKR-VIKVGTDGVYAPFSFKDESSGKLTGYDVEVIQEVGKRINAD---IEFTTVPWDSIF 83

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI 148
           L L+SK+ DI++   + T  RE      F           I+ + +  I ++  L G  +
Sbjct: 84  LGLESKRYDIIANEIEKTKEREE--KYIFSDKYLVSAAQIIVKEGENNIKTLKDLEGKRV 141

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFE-RVEEIDAAYRAHRCDAYTGDISALYALKLT 207
               G+    T+ +Y K    K +   F+  +          + DA   D   L      
Sbjct: 142 ISAVGSNYSKTVEEYNKTAAKKINLNYFDGGITLTLVEIAQGKADATLSDR--LVVSYYK 199

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +  +  ++ + +S +P      +   E  N V+   
Sbjct: 200 KQQGDKVQLVGEPLSTTPTFFLFRKDSEELRNEVNKAL 237


>gi|76789111|ref|YP_328197.1| arginine-binding protein [Chlamydia trachomatis A/HAR-13]
 gi|237802805|ref|YP_002887999.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           B/Jali20/OT]
 gi|237804727|ref|YP_002888881.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|76167641|gb|AAX50649.1| arginine-binding protein [Chlamydia trachomatis A/HAR-13]
 gi|231273027|emb|CAX09940.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274039|emb|CAX10833.1| arginine transport substrate-binding protein [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 257

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 65/246 (26%), Gaps = 14/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +   +  +     T                    G N     F  V   G+  GFD+
Sbjct: 6   KKTWIAFLAVVCSFCLTGCLKEGGD----SNSEKFIVGTNATYPPFEFVDKRGEVVGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +S+ +       ++   +     L L+  +ID +      T  R   + +     
Sbjct: 62  DLAREISNKLGKTLDVREF---SFDALILNLKQHRIDAVITGMSITPSRLKEILMI-PYY 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   ++ K +    +      S+ VQ GT  E  L         + H   F+   E
Sbjct: 118 GEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQEAYLQ-----FLSEVHIRSFDSTLE 172

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +       +      + S    +        +  + LP+          +          
Sbjct: 173 VLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPEDQWVLGYGIGVASDRPALALE 232

Query: 241 VSWTHY 246
           +     
Sbjct: 233 IEAAVQ 238


>gi|209965979|ref|YP_002298894.1| histidine-binding periplasmic protein [Rhodospirillum centenum SW]
 gi|209959445|gb|ACJ00082.1| histidine-binding periplasmic protein [Rhodospirillum centenum SW]
          Length = 293

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 73/242 (30%), Gaps = 35/242 (14%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         +    A G+  GFDVD  R + + I  +    + +  N       LQ+ 
Sbjct: 37  LRIATEGAYPPYNMTDAAGNLTGFDVDVAREVCARIKVE---CRIVAQNWDGIIPGLQTG 93

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-------------- 141
           + D ++     T  RE  +   F          F+      +  +               
Sbjct: 94  KYDAIAAGMSITEEREKVVA--FTQGYATTPAYFVALNDSPLQDIDTGLERVNLTDLDEA 151

Query: 142 ----------QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                     +L G ++ VQ+ T     L +Y            ++  E +     A R 
Sbjct: 152 EKAALATLRERLKGRTVGVQSATIHANFLDEYLA---DTVSVRRYDTQENLALDLAAGRI 208

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDII---SKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           DA   D SA  A   + +  +     P          +  AI Q +    + ++    +M
Sbjct: 209 DAGLADASAWEAFLDSPEGRNASFFGPGFDGGLFGRGMGIAIRQNEPALLDALNGALASM 268

Query: 249 VT 250
             
Sbjct: 269 QQ 270


>gi|171741044|ref|ZP_02916851.1| hypothetical protein BIFDEN_00110 [Bifidobacterium dentium ATCC
           27678]
 gi|171276658|gb|EDT44319.1| hypothetical protein BIFDEN_00110 [Bifidobacterium dentium ATCC
           27678]
          Length = 308

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 12/218 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L  G+            +G    G+DVD  +A++  +   P   + +         
Sbjct: 67  KDGELSSGMELSYAPAEFYAEDGKTPVGYDVDMTKAIAQVLGLKP---KIVSSMFDTIIP 123

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ++ + + D+   +   T  R     + F           +          S + GA I V
Sbjct: 124 SIGT-KYDLGITSMTITKER--MESVDFVSYYRAGSTWAVQKGNPKKLDASDMCGAKIAV 180

Query: 151 QAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           Q GTT E    D  K    + K   + ++R  E   A    + DA+  D           
Sbjct: 181 QTGTTQEDDANDIAKGCKADNKAEVLSYKRQAEAATAVATGKADAFYADSPVAGYAISQT 240

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D       L D+   +    AI +G+ +    V     
Sbjct: 241 DG---LEALGDVEGVAKQGIAIEKGNEKLDEAVQKALQ 275


>gi|163792481|ref|ZP_02186458.1| hypothetical protein BAL199_16578 [alpha proteobacterium BAL199]
 gi|159182186|gb|EDP66695.1| hypothetical protein BAL199_16578 [alpha proteobacterium BAL199]
          Length = 286

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 75/243 (30%), Gaps = 35/243 (14%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K         +    + G   GF+VD    L   +     + + +    +    ALQ+
Sbjct: 33  KIKIATEGAYAPWNFTDSAGKLVGFEVDLAADLCKRM---EVECEVIQQAWEGIIPALQA 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------------- 131
            + D++      T  R     ++F          F++                       
Sbjct: 90  GKYDVIMAGMSITEKR--MEVISFSRAYAATPAVFVVTTGNKSAGFKTAVDALTLEEIDA 147

Query: 132 -HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             K    + V +  G +I VQ  TT E  L +Y            ++  E +D   +A R
Sbjct: 148 AEKTALDAVVKEFKGKTIGVQISTTHENFLREYL---GKDATIKTYDTQENLDLDLQAGR 204

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDII---SKSPLAPAIIQGDTEWYNIVSWTHYA 247
            DA     S    L  ++      ++ P +      + +   I + D    ++ +    A
Sbjct: 205 VDAALASASYWVPLLASDKGKGMVMVGPGMTGGPFGNGVGAGIRKEDKALNDMFTKAINA 264

Query: 248 MVT 250
            + 
Sbjct: 265 SIA 267


>gi|145633091|ref|ZP_01788823.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           3655]
 gi|144986317|gb|EDJ92896.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           3655]
          Length = 239

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 81/259 (31%), Gaps = 33/259 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAVSAQ--------------ELTFAMEPSYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I       ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QVTCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++    K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALNGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
                 ++ R D   GD + L  +      P    I   + +K      L  A+ + + +
Sbjct: 154 NAILDLKSGRIDIILGDTAVLSDMIS--KEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKD 211

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 212 LAAQLNKGLAAIKANGEYQ 230


>gi|227551496|ref|ZP_03981545.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium TX1330]
 gi|227179393|gb|EEI60365.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus faecium TX1330]
          Length = 244

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 63/219 (28%), Gaps = 7/219 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+  L    +  L   +      +  G+DVD  + ++  +     KI +   N   +  +
Sbjct: 3   KKKELVVATSGTLFPASYYNDQNELVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITS 59

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +   + D  + +   T  RE    L+      FD          GI S+  L G     +
Sbjct: 60  VSKGESDFAANDFGITKEREKKFSLSEPFKYSFDSMIVRKKDDSGIHSLDDLKGKKAAGE 119

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T+         + H  K         ++  +     R D    D              
Sbjct: 120 PNTSYMRL----AEKHGAKLVTYDNATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDI 175

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++     +++     + +G+      +      M  
Sbjct: 176 PVKILENVYFNENESGFLLKEGNDALKKKIDGVLKEMKE 214


>gi|225677197|ref|ZP_03788192.1| amino acid ABC transporter, periplasmic amino acid binding protein
           [Wolbachia endosymbiont of Muscidifurax uniraptor]
 gi|225590765|gb|EEH11997.1| amino acid ABC transporter, periplasmic amino acid binding protein
           [Wolbachia endosymbiont of Muscidifurax uniraptor]
          Length = 129

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 14/143 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+ + IL             +I     ++  I+     F     NG + GFD
Sbjct: 1   MKKYILNAIIAISILLTGC---KEDKHDNI-----IRFAISADYPPFEYY-ENGKFTGFD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + ++  +  +     +  +     F ALQS  +D        T  RE      F  
Sbjct: 52  IELAQLVAKELGKEA---IFKDMQFSTIFAALQSNSVDAAISTIGSTEEREK--NFDFSN 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQL 143
             Y    G + HK K I+ ++ L
Sbjct: 107 SYYTGEFGILYHKNKPIAGINNL 129


>gi|293395617|ref|ZP_06639900.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Serratia odorifera DSM 4582]
 gi|291421936|gb|EFE95182.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Serratia odorifera DSM 4582]
          Length = 132

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 5/114 (4%)

Query: 2   YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
            +   + ++ + +    +       ++L  +K+RG L  G+      F+    +G   GF
Sbjct: 7   RRQLLLGVMAVTLTAGINAQTFAAENLLDQVKQRGTLIVGLEGTYPPFSFQGEDGKLTGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           +VDF  AL+  +       +  P        +L+SK+ID++      +  R+ +
Sbjct: 67  EVDFANALAQHLGVKA---KLNPTKWDGMLASLESKRIDVVINQVTISDERKKN 117


>gi|322373784|ref|ZP_08048319.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C150]
 gi|321277156|gb|EFX54226.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C150]
          Length = 516

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 83/295 (28%), Gaps = 38/295 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG------ 54
           M K        L+++F    S  A          +L+ G+      F   + +       
Sbjct: 1   MKKIIVACFAALLLVFGGVSSAQADE--------YLRVGMEAAYAPFNWTQDDNSNGAVP 52

Query: 55  -----DWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ A    P  ++           AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQIAKKIAEAQGKKPLVVK---TAWTGLIPALTSSKIDMIVAGMSTTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++    K     ++    GA I  Q G      L D   
Sbjct: 110 ERRK--EINFSDSYYTSEPVVVVDAKGKYANAKTIDDFKGAKITAQQG----NYLVDLIT 163

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDI 220
                           +  A  +   D Y  +       +  +                 
Sbjct: 164 QIPNVDKQTPMSDFGAMRQALSSGIIDGYISERPEALTAEAASSTYKMIALKKGDGFKVS 223

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                +A  + + DTE    V+    A ++ ++      +I  +     + + ++
Sbjct: 224 NDDISIAVGLRKDDTETLTQVNKVL-ATISQDDRAKLMNHIISIQPAEKHDETKK 277


>gi|254254659|ref|ZP_04947976.1| extracellular solute-binding protein [Burkholderia dolosa AUO158]
 gi|124899304|gb|EAY71147.1| extracellular solute-binding protein [Burkholderia dolosa AUO158]
          Length = 257

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 10/217 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ GI+           +G  KGFDVD    +         + Q++ L       ALQ++
Sbjct: 28  VRVGIDPTYPPMDAKAPDGSLKGFDVDLGNEICRRA---QLRCQWVELEFSGMIPALQAR 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154
           +ID +  +   T  RE    + F    +      +    +G+ S +  L+G  I VQ+GT
Sbjct: 85  KIDAILSSMAITEKREK--QILFSSKLFRFKSRLVARPDRGLDSTAASLAGKRIGVQSGT 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E     ++    +    + ++  +++ A     R DA            L   + S  
Sbjct: 143 QFESWALAHWAPAGVS--IVPYKSQDDVFADLVNRRLDAALLGAVEADYGFLRTPKGSGF 200

Query: 215 VILPDI--ISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             +     +    +   + Q DT     +     +M+
Sbjct: 201 AFVGAPLDMGDRGVGIGMRQSDTALKASIDGAIASML 237


>gi|222082567|ref|YP_002541932.1| glutamine ABC transporter [Agrobacterium radiobacter K84]
 gi|221727246|gb|ACM30335.1| glutamine ABC transporter [Agrobacterium radiobacter K84]
          Length = 277

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 9/216 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G       +    A+G + GFD++    + S +     K+ +          ++ +
Sbjct: 46  TISVGTMGDAKPYTFATADGQFTGFDIELFLNVVSRMGFAKDKVTFTGQEFSALMPSVAN 105

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D+       T  R+ +  + F           +  +   I     L G  + V  GT
Sbjct: 106 ERFDVAVAAIGTTEARKKT--VDFSDGYLAGYLSVLTPEAS-IKDADTLKGKRLGVVQGT 162

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E+     F         + F       AA      DA+  D     A +     PS  
Sbjct: 163 LQEIYATKNFA----GADLVKFPDNNSAVAALNNGTIDAHFLDYE--AAKQYGERYPSLK 216

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + +      +P    I +G+  +   ++   +  + 
Sbjct: 217 IAVNIPSFDAPAGFVIRKGNDAFRTALNKALHEAMQ 252


>gi|13021831|gb|AAK11558.1|AF299117_4 ABC transporter binding protein-like protein AabH
           [Desulfitobacterium dehalogenans]
          Length = 269

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 83/262 (31%), Gaps = 20/262 (7%)

Query: 7   VSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           V +L   +       +        S L   K++G +  G       +A   A+G   G  
Sbjct: 12  VGMLAFSVFALGGCGSTKTNDGGMSTLEKAKEKGAVTVG-FANEKPYAYKTADGKLTGEA 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  RA+   +  +  + +            LQ+K+ D+++     T  R     ++F  
Sbjct: 71  VEIARAILKELGINEMQGEL--TEFASLIPGLQAKRFDMVTAGMFITPERAE--QVSFAN 126

Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y  G+   + K   +   S   ++       A     +       +   K   +    
Sbjct: 127 PEYSIGEAIAVKKGNPLDLHSYEDIAKHGTAKVALPGGAIEYDYLVASGVPKDRIVTVPD 186

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-------KSPLAPAII 231
           +    AA +A R D  T    ++ A   T   P+   ++            K   A A  
Sbjct: 187 MPAALAALQAGRADVITATGPSVQATLDTAADPNLERVMDFTQPVINGKNVKGYGATAFR 246

Query: 232 QGDTEWYNIVSWTHYAMVTAEE 253
             D+++    +     +  + E
Sbjct: 247 HEDSDFREAFNAELQKLKESGE 268


>gi|77409421|ref|ZP_00786118.1| GlnP [Streptococcus agalactiae COH1]
 gi|77171979|gb|EAO75151.1| GlnP [Streptococcus agalactiae COH1]
          Length = 469

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 77/240 (32%), Gaps = 11/240 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           K   ++    F      G + GFD++    ++        K+            A+QS Q
Sbjct: 15  KIVSDSPFAPFEYQNGKGKYTGFDMELITKIAKQ---QGFKLDISNPGXDAALNAVQSGQ 71

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            D +      T  R+      F    Y       + K   + S   L G ++  + GT +
Sbjct: 72  ADGVIAGATITEARQKI--FDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTAS 129

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L+D+   +N   H   F+    +  +  +   DA   D      L    ++  +   
Sbjct: 130 YTWLSDHADKYNY--HVKAFDEASTMYDSMNSGSIDALMDDE---AVLAYAINQGRKFET 184

Query: 217 LPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                    +  A+ +G + E   + +    ++  + E     K     +  ++N    +
Sbjct: 185 PIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAK 244


>gi|317482552|ref|ZP_07941567.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915974|gb|EFV37381.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 318

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 65/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGTDTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTMTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + +   +  D +   
Sbjct: 184 KVAVQTGTTQEEEVNKDNEQCKADGKDAIDIQSSKLQTDVTTAVASGKASIFYADSTVSA 243

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                         L +     P A AI +GDT+    V     
Sbjct: 244 --YAIKQTGDTLETLGEDAGGVPEAVAIKKGDTKTAEAVQKAIQ 285


>gi|312133206|ref|YP_004000545.1| hisj6 [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772407|gb|ADQ01895.1| HisJ6 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 318

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 65/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +AL++      + +        
Sbjct: 70  DSVAGDGTLTVGTDTSYAPAEFLAEDGKTPVGFDVDLSKALAAVFGLKENTVS---STFD 126

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F           +          S L G 
Sbjct: 127 SIIPSVGS-KYDIGISSFTVTKER--MEAVDFVTYFKAGSTFVVQKGNPNKVDSSNLCGV 183

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + +   +  D +   
Sbjct: 184 KVAVQTGTTQEEEVNKDNEQCKADGKDAIDIQSSKLQTDVTTAVASGKASIFYADSTVSA 243

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                         L +     P A AI +GDT+    V     
Sbjct: 244 --YAIKQTGDTLETLGEDAGGVPEAVAIKKGDTKTAEAVQKAIQ 285


>gi|309779619|ref|ZP_07674378.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308921560|gb|EFP67198.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 282

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 80/225 (35%), Gaps = 10/225 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPL 83
           + L  I++R  +  G+      F  +        GF+VD  +AL   +  +   ++ + +
Sbjct: 33  ATLDKIQQRKKIVVGVVLSGGPFGSIDPVTQRGTGFNVDLAQALGRGLGVE---VETVQV 89

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
               R   LQ  ++D+L    +    R   L     P     G   +  +   +   S L
Sbjct: 90  QPSNRVQFLQQGRVDVLVAAMELNPERAELLAHVPTPYYRVGGVALV-AQDSPVHQWSDL 148

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  +C+  G++    LA    A      P  F+   E   A R + C A   D + L  
Sbjct: 149 KGKDVCLSQGSSYAKPLAADIGA-----TPKGFKSPAESLLALRGNNCAAAVHDATLLQP 203

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L  +N    ++ I+   +  SP      +G+ +    +       
Sbjct: 204 LPRSNPEWKDYRIVGPDLIPSPTVIWARKGENDTVAALDRIVQGW 248


>gi|302546545|ref|ZP_07298887.1| putative ABC transporter, solute binding protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302464163|gb|EFL27256.1| putative ABC transporter, solute binding protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 321

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 14/198 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTG-LVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +   I++RG L+ G +             +    G ++D    ++  +     K+
Sbjct: 58  AIAAKVPEAIRRRGTLRLGGSADASPPLGFYATDDKTRIGVEIDLATLVADTLG---LKV 114

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKG 136
            +  ++ +  F+ L S + D +  N   T  R+      F      D   F   K     
Sbjct: 115 AFEAVSWENLFVGLDSSKFDAVFSNVTVTEERKE--KYDFA-TYRLDNLAFEAKKGTSWR 171

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNM----KYHPIVFERVEEIDAAYRAHRCD 192
           I     ++G +I V +GT  E  L D+ K +            F++  +   A ++ R D
Sbjct: 172 IKGPKDVAGKTISVSSGTNQEKILVDWSKENEKAGRKPVDIKYFQKDTDYYLALQSGRID 231

Query: 193 AYTGDISALYALKLTNDR 210
           AY G          +  +
Sbjct: 232 AYLGPHPTAAYHVASAGQ 249


>gi|307150366|ref|YP_003885750.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
 gi|306980594|gb|ADN12475.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
          Length = 307

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 12/234 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPS 76
           +   S+L +I+K G L+  +    V F     + +  G  +D        +   +     
Sbjct: 44  AQETSVLDNIQKTGLLRVAMREDAVPFGYKDLDNNLNGICLDVINLIRQQIQEELNKQII 103

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++        RF  ++   +D+           +  L +AF    +  G  FI+   + 
Sbjct: 104 TVKLFQSTLYNRFDLVKDGLVDLECGPNTIRQASD--LAIAFSDPFFITGTQFIIKTDQE 161

Query: 137 ISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
               +   L+  ++ V   TTT+  + + +    ++              A ++ + DA+
Sbjct: 162 NKFNTDGSLADLTLGVLRNTTTQEFIRNRYPQAKIQV-FQGITGRLRGIQAVQSGKIDAF 220

Query: 195 TGDISALYALK--LTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTH 245
             D   L           P ++ ++P   +        + + D  W  +V+   
Sbjct: 221 ASDGILLLGEATLQGLSIPEQYQLVPQRPLDCQYYGLILPKNDPRWRELVNSVI 274


>gi|237742161|ref|ZP_04572642.1| amino acid-binding protein [Fusobacterium sp. 4_1_13]
 gi|229429809|gb|EEO40021.1| amino acid-binding protein [Fusobacterium sp. 4_1_13]
          Length = 242

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 75/225 (33%), Gaps = 14/225 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G N     +  +  N    GFD++    L   +  +   I++  ++      A
Sbjct: 10  AAKKLYVGTNAEFKPYEYL-ENNKMLGFDIELMELLGKELGYE---IKWQDMSFDGLLPA 65

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ K+ID +      T  RE ++  +   I + DG   I++ K        L G ++ VQ
Sbjct: 66  LQMKKIDAVIAGMSATPEREKAVSFSIPYIFFEDGHDVIVNDKSSFKKKEDLKGKTVGVQ 125

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  E    D          P ++    E     +  + DA      +      T    
Sbjct: 126 LGSIQEEFAKD------NGSIPKLYNNFTEALLDLQNQKIDAVIIAEVSGKEYLKTMKG- 178

Query: 212 SEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                +  I  K P A  A  + D +     S T   +  + E  
Sbjct: 179 --IKKIDTIKDKLPNASIAFRKADAKLAKEFSNTILKIKNSPEYA 221


>gi|329666485|gb|AEB92433.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 537

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 94/317 (29%), Gaps = 37/317 (11%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M      F ++L LI+     FS N++     KK   LK G+      +       ANG 
Sbjct: 1   MKSKIRWFGALLALILSLVIGFSFNSNQTEAAKKEAPLKIGMEANYPPYNWTQTTDANGA 60

Query: 56  W---------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                      G+DV   + +   +     K+            AL S +ID++      
Sbjct: 61  VPIDGSKQYANGYDVQIAKIIGKKL---HRKVVVEKTEWDGLLPALTSGKIDLIIAGMSP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R     + F           I +   K      ++   GA +  Q GT     +   
Sbjct: 118 TAERRK--AINFSEPYRKSTFVVITNKDGKFAQAKGLNDFKGAKLTAQQGTLHYDLIKQL 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A               +  + ++   D Y  +     + K  N        ++     
Sbjct: 176 HGAKREP----AMRSFSAMRQSLQSGTIDGYVAEDIEYQSYKTVNPNIVAVNLNKMQGFK 231

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP------D 272
                S  +  + +G+TE  + V+     +   +   +  + + +  +   +        
Sbjct: 232 VDHDDSITSIGVKKGNTELLDQVNSILKGISNKKRDQLMAQAVKEQPQAGGSKKENWFMS 291

Query: 273 VQRFLGIDKSSNIGEAL 289
           + R  G      +G  L
Sbjct: 292 IMRRYGSMILGGVGMTL 308


>gi|306817583|ref|ZP_07451326.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307699948|ref|ZP_07636999.1| bacterial extracellular solute-binding protein, family 3
           [Mobiluncus mulieris FB024-16]
 gi|304649625|gb|EFM46907.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307614986|gb|EFN94204.1| bacterial extracellular solute-binding protein, family 3
           [Mobiluncus mulieris FB024-16]
          Length = 296

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 73/267 (27%), Gaps = 29/267 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA------------------SILGDIKKRGFLKCGINTG 43
            K F +     + L  T+ +  A                  S L   K +  LK  I++ 
Sbjct: 5   RKIFTLLCTASLCLSLTACAGKANHAVDSFDTSTIPEDKEISSLVPAKNKELLKVAIDSP 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
            +            G++VD  RAL+  +      +Q+  ++       + +   D+ +  
Sbjct: 65  YIPAGFFDDKNQATGYEVDVVRALARVLG--IKNVQFSDVDFDSILSQVDNGTYDMAAAA 122

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD- 162
                 R   L +                            G +I  ++ T+ E  L D 
Sbjct: 123 MTVKKSRMRDLNM--VAYIQSGFIYGTQKNNPKNFDYGDPCGFTIAAKSNTSQEELLHDL 180

Query: 163 ---YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                +        +  +  +++         DA  G+ + +   +  N        + +
Sbjct: 181 SETCKETGKNAIKIVADKDQDKLINEVANGSIDAIIGESAIIKYAETRNKN---FASVGE 237

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +P   A  + +            
Sbjct: 238 SFQMAPQGLATAKNNEPLAKATQAGLQ 264


>gi|171742864|ref|ZP_02918671.1| hypothetical protein BIFDEN_01980 [Bifidobacterium dentium ATCC
           27678]
 gi|171278478|gb|EDT46139.1| hypothetical protein BIFDEN_01980 [Bifidobacterium dentium ATCC
           27678]
          Length = 281

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 87/250 (34%), Gaps = 13/250 (5%)

Query: 6   FVSILCLI--ILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVD 62
             ++LC    ++  ++  T+ S++ + + +G  +  G+ T   G   +    D+ GFD+ 
Sbjct: 8   IAAMLCAASIVVGVSACGTSISVVTNGQAQGPTITIGVATDQPGLGLLHGK-DYSGFDIT 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++  +     ++ +  +    R  AL S  +D++  +       +    + F    
Sbjct: 67  VARYVAQYLGFADKQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHD--DEVTFAGPY 124

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +  ++       I SV  L G ++C   G+ +        +    K      +   
Sbjct: 125 LTVRRDLLIRADDKDGILSVDDLDGKTVCTAKGSISGS----DMRNLTDKMTVEERDTYP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A      DA   D + L  L           ++ +   +     A+  G +E    
Sbjct: 181 QCVTALMIGEADAIISDDAILTGLAADRGGGY-LKVVGEPFGEQSYGIAVRNGKSELVGQ 239

Query: 241 VSWTHYAMVT 250
           +     AMV 
Sbjct: 240 IDAALKAMVA 249


>gi|227889073|ref|ZP_04006878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227850302|gb|EEJ60388.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 537

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 94/317 (29%), Gaps = 37/317 (11%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M      F ++L LI+     FS N++     KK   LK G+      +       ANG 
Sbjct: 1   MKSKIRWFGALLALILSLVIGFSFNSTQTEAAKKEAPLKIGMEANYPPYNWTQTTDANGA 60

Query: 56  W---------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                      G+DV   + +   +     K+            AL S +ID++      
Sbjct: 61  VPIDGSKQYANGYDVQIAKIIGKKL---HRKVVVEKTEWDGLLPALTSGKIDLIIAGMSP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R     + F           I +   K      ++   GA +  Q GT     +   
Sbjct: 118 TAERRK--AINFSEPYRKSTFVVITNKDGKFAQAKGLNDFKGAKLTAQQGTLHYDLIKQL 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILP 218
             A               +  + ++   D Y  +     + K  N        ++     
Sbjct: 176 HGAKREP----AMRSFSAMRQSLQSGTIDGYVAEDIEYQSYKTVNPNIVAVNLNKMQGFK 231

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP------D 272
                S  +  + +G+TE  + V+     +   +   +  + + +  +   +        
Sbjct: 232 VDHDDSITSIGVKKGNTELLDQVNSILKGISNKKRDQLMAQAVKEQPQTGGSKKENWFMS 291

Query: 273 VQRFLGIDKSSNIGEAL 289
           + R  G      +G  L
Sbjct: 292 IMRRYGSMILGGVGMTL 308


>gi|71083757|ref|YP_266477.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062870|gb|AAZ21873.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 255

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 75/226 (33%), Gaps = 17/226 (7%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             S L  I   G LK G        A        +KGFD+D  + L+  +      I ++
Sbjct: 19  AESKLDQILSSGELKVGTTGDWDPMAMKDPATNKYKGFDIDVMQELAKDMGVK---ITFV 75

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG--FIMHKKKGISS 139
           P   K     + + + DI   +T  T   + +    F    Y  G     +    K  S+
Sbjct: 76  PTEWKTIVSGITAGRYDI---STSVTKTPKRAEVAGFTDSYYKYGTVPLVLKKNLKKYST 132

Query: 140 VSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              L+    +I    GT+ E    ++F            E          A R D     
Sbjct: 133 WKSLNNKDVTIATTLGTSQEEKAKEFFPL----SKLQSVESPARDFQEVLAGRADGNIT- 187

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            S+  A KL    P   ++     + + LA  + + D  W + V+ 
Sbjct: 188 -SSTEANKLVVKYPQLAIVPDGEKNPAFLAMMVSKNDQVWNDYVNE 232


>gi|16079989|ref|NP_390815.1| sulfur-containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310881|ref|ZP_03592728.1| hypothetical protein Bsubs1_16031 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315206|ref|ZP_03597011.1| hypothetical protein BsubsN3_15927 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320124|ref|ZP_03601418.1| hypothetical protein BsubsJ_15843 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324406|ref|ZP_03605700.1| hypothetical protein BsubsS_16002 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7674449|sp|O34852|TCYK_BACSU RecName: Full=L-cystine-binding protein tcyK; Flags: Precursor
 gi|2293248|gb|AAC00326.1| putative lysine-binding protein [Bacillus subtilis]
 gi|2635402|emb|CAB14897.1| sulfur-containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 270

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 5/203 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANGDWKG 58
           M  K  F++IL  +I   ++    +   G  +K+   +  G  T       +   GD  G
Sbjct: 1   MKTKTAFMAILFSLITVLSACGAGSQTTGAGQKKVQTITVGTGTQFPNICFIDEKGDLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+  + L   +     K  +  +      ++L   ++DI++   + +  RE       
Sbjct: 61  YDVELIKELDKRL--PHYKFTFKTMEFSNLLVSLGQHKVDIVAHQMEKSKEREKKFLFNK 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFE 177
               +F  +  ++     I  +  L G  +   A +   L L  + + +   +      +
Sbjct: 119 VAYNHFPLKITVLQNNDTIRGIEDLKGKRVITSATSNGALVLKKWNEDNGRPFEIAYEGQ 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISA 200
              E     ++ R DA      A
Sbjct: 179 GANETANQLKSGRADATISTPFA 201


>gi|291619609|ref|YP_003522351.1| ArtJ [Pantoea ananatis LMG 20103]
 gi|291154639|gb|ADD79223.1| ArtJ [Pantoea ananatis LMG 20103]
          Length = 251

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 78/252 (30%), Gaps = 22/252 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     V++  L +    ++S +A+          L  G          +    G  +GF
Sbjct: 2   MSIRSHVTMALLSVALGVTYSAHAAT---------LTAGSPPSSAPTTFLDTKTGKIEGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    ++     D   + +  +       ++ + +ID++      T  RE    ++F 
Sbjct: 53  MPDVAAEVAKRQHLD---VNFTAVPFSTLIQSVIAGKIDMIVAGMTPTPEREK--RISFS 107

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 G G ++         S   L G  +    GT     L        +     V++
Sbjct: 108 QPVTAFGPGLVVRDDNKKVYRSQQDLKGDIVGTMTGTDYTQALI----KSGIPKEVKVYD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              ++       R  A   D   + Y  K    +    V        +P+A  + +G+ +
Sbjct: 164 SPADMMRDLSLGRIAAGMNDYPIMKYQEKSGAYKGMHVVDGYKPEHIAPMAFGVKKGNDK 223

Query: 237 WYNIVSWTHYAM 248
               ++    AM
Sbjct: 224 LLADINTALTAM 235


>gi|218512885|ref|ZP_03509725.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
          Length = 309

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 27/257 (10%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78
            A  L  ++    LK G +     F+   A G   G+ V  C  ++    + +      +
Sbjct: 31  QAQTLDRVRTNSALKLGYDPDARPFSF-DAQGKPDGYAVALCNRIADSLRAQLNLSKLDV 89

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI- 137
           +++PL+   +  A+Q    D++      TL R     ++F    +  G G +++    + 
Sbjct: 90  EWVPLSGDAKLRAIQDGTADLVCAAEPVTLGR--RQQVSFSLPIFPSGTGALLNASAPLA 147

Query: 138 -------------------SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                               + + L   +    AGTT+E  L+   K   +         
Sbjct: 148 LREILQYGEPSSRPVWRGAPARTILEHKTFSSIAGTTSEEWLSGRIKTFQLAATATPVTD 207

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            ++              GD+  L      +D     ++L    +  PL   + +GD ++ 
Sbjct: 208 YQQGIERILDGSSAVLFGDMPLLMDAAARSDSSGNLIVLERHFTYEPLGLELTRGDEDFR 267

Query: 239 NIVSWTHYAMVTAEELG 255
             V         AE   
Sbjct: 268 LAVDRALSQAYAAENFR 284


>gi|283455570|ref|YP_003360134.1| ABC transporter solute binding protein [Bifidobacterium dentium
           Bd1]
 gi|283102204|gb|ADB09310.1| Solute-binding protein of ABC transporter system [Bifidobacterium
           dentium Bd1]
          Length = 261

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       +  +G    GFDVD  +AL++    +         N  
Sbjct: 13  DSVTKDGKLSIGMDTSYAPAEFLAEDGKTPVGFDVDIAKALANIFGLEADP---ETSNFD 69

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F  +        +          S L G 
Sbjct: 70  SIIPSVGS-KYDIGISSFTITKER--MEAVDFVSMFKAGSTWVVKKDNPNKVDTSSLCGL 126

Query: 147 SICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            I VQ GTT E  + +               +  +   ++       + D +  D     
Sbjct: 127 KIAVQTGTTQEEEVNEAQEQCKADGKQDIQILSNKLQTDVTTNVATGKADVFYADSPVAG 186

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   E +     ++K   A AI +GD++    V     
Sbjct: 187 YAIAQTEDTLEALGEDVGVTKE--AVAIKKGDSDTAKAVQAALQ 228


>gi|187929848|ref|YP_001900335.1| Arogenate dehydratase [Ralstonia pickettii 12J]
 gi|187726738|gb|ACD27903.1| Arogenate dehydratase [Ralstonia pickettii 12J]
          Length = 270

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 55/184 (29%), Gaps = 14/184 (7%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
            +   + L +I  RG L+ G       F      +G + G DV+    L+ A+      +
Sbjct: 25  TTQATNRLDEIIARGTLRVGTTGDYKPFTYKNPADGRFIGLDVEMGERLAKALGVK---L 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + +P           + + DI       TL R+      +      DG+  I   +    
Sbjct: 82  EIVPTTWSTLMQDFAADRYDIAMSGVSVTLERQK--KAFYSIPYQRDGKTPITRCENQSK 139

Query: 139 SVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +            V  G T E    ++ K         V+     I     A R D  
Sbjct: 140 YQTLAQIDQPNVRAVVNPGGTNEKFAREHLKQA----QIRVYPDNVTIFNEIVAGRADLM 195

Query: 195 TGDI 198
             D 
Sbjct: 196 MTDA 199


>gi|118467346|ref|YP_884592.1| glutamine ABC transporter periplasmic protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118168633|gb|ABK69529.1| glutamine ABC transporter periplasmic-binding protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 284

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 76/274 (27%), Gaps = 27/274 (9%)

Query: 1   MYKDF------FVSILCLIILFFTSFSTNASILGD---IKKRG-FLKCGINTGLVGFAEV 50
           M K         V+      L     S       +    K  G  +    +     F  V
Sbjct: 1   MNKSMQRLARSAVACCVAGALVSGCSSAPGDTSQETDGAKPSGQEITVATDATYRPFETV 60

Query: 51  KA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                   G D D   A+   +      ++   +        LQ+++ D  +     T  
Sbjct: 61  DPATKKIVGLDADLVEAIGDTLG---LTVKLTNVGFDSIVPGLQARKYDAAASGISVTPE 117

Query: 110 REISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTE-----LTLA 161
           RE    + F P     G G  + K            L G +I    GT           A
Sbjct: 118 REKV--VDFVP-YMSAGSGLAVQKGNPHDLKMEPLALCGHTIGAPKGTIQAIGQLPEISA 174

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                   +     F   + ++ A  + R DA      +L      +D   E     D  
Sbjct: 175 KCVAEGKPEISISQFPSQDAVNLALSSGRIDAAMAANISLAIQVEESDGALELAP-GDPY 233

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             SP+  A  +G ++    V      + ++ EL 
Sbjct: 234 DPSPVGIAFPKG-SDLLPAVKTAMAQLDSSGELK 266


>gi|186473901|ref|YP_001861243.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184196233|gb|ACC74197.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 279

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 68/234 (29%), Gaps = 8/234 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              +  LC      +  +     L  ++K G L  G       F  +  NG   GF+ D 
Sbjct: 10  RLAMVALCAAASVASVSAHAEDQLAKVRKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDL 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              +   +      ++++ L        L++ + D++      T  R       +     
Sbjct: 69  FAEIGKELGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPVA 123

Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                 +       I   S + G ++    G+     L  Y      +     +    + 
Sbjct: 124 DATDALLKRANDASIKQSSDIVGKTVGAGKGSAQLDQLKAYIATLPKQPEVREYVDNNQA 183

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            A   A R  A    ++ +  +       +  V+ P   +K   A  + +    
Sbjct: 184 YADLAAGRIAAVANSMTNIAYVAKQRPE-TFAVVTPPFGAKVYFAYCLRKDADS 236


>gi|50914069|ref|YP_060041.1| cystine-binding protein [Streptococcus pyogenes MGAS10394]
 gi|50903143|gb|AAT86858.1| Cystine-binding protein [Streptococcus pyogenes MGAS10394]
          Length = 299

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 37  SQKSSWNTIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 93

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +        +  
Sbjct: 94  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMAKK 152

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 153 DLSDWKGKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYP 209

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 210 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 269

Query: 257 TQKNI 261
             +  
Sbjct: 270 ISETY 274


>gi|295675112|ref|YP_003603636.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295434955|gb|ADG14125.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 264

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 14/223 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G+      F     NG+ +G D+D   A+ +A        +++  +      ALQ +
Sbjct: 31  LRFGLEAQYPPFESKGPNGELQGLDIDVGNAVCAAA---HMTCKWVETSFDGLIPALQGR 87

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154
           + D ++   + T  R     + F  + Y      I     G+  +   L G  I V  G+
Sbjct: 88  KFDAINSAMNATEQR--RQAIDFTTVVYRVPSQLIARSDSGLQPTPESLKGKRIGVLQGS 145

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E     +++        + ++   ++     A R D       A     L+      +
Sbjct: 146 IQETFAKVHWEPAG--VTVLPYQDQNQVYTDLTAGRLDGTLVLAPAGQTGFLSKPEGKGY 203

Query: 215 VILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             +   +         +A  I +GDT   + ++    A V A+
Sbjct: 204 GFVGHPVRDDKILGSGIAYGIRKGDTALRDQLNAAI-AKVQAD 245


>gi|170734676|ref|YP_001773790.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169820714|gb|ACA95295.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 270

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 67/201 (33%), Gaps = 21/201 (10%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSA 70
           L +L     S  A           L+ GI+      F    A G WKG+++D    L +A
Sbjct: 19  LFVLGLAPVSHAAQP--------TLRVGIDAESYPPFFSKDAGGKWKGWEIDV---LDAA 67

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 + +   +       ALQ+++ID++  +   T  R+    + F    Y     F+
Sbjct: 68  CGKLNVRCELTDIAWDGLIPALQNRKIDVIWSSMTITGERQK--AIDFSRAYYESPTVFV 125

Query: 131 MHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             K               G+ I V+AGT     L   FK          F++ +   A  
Sbjct: 126 GAKSDRRRVDCAVPATFKGSVIGVEAGTNFSAFLDARFKQ---DAQIKAFDKFDNALADL 182

Query: 187 RAHRCDAYTGDISALYALKLT 207
            + R D          A   +
Sbjct: 183 VSGRVDYVQEGKGLFTAFLAS 203


>gi|118467837|ref|YP_885592.1| serine/threonine-protein kinase PknD [Mycobacterium smegmatis str.
           MC2 155]
 gi|118169124|gb|ABK70020.1| serine/threonine-protein kinase PknD [Mycobacterium smegmatis str.
           MC2 155]
          Length = 608

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 74/237 (31%), Gaps = 13/237 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A++   I++ G L  G+N          ++G+  GFDVD  +A++  +   P       
Sbjct: 359 AATVPAHIRETGRLVIGVNVPYAPNEFKNSDGEIVGFDVDLMKAVTRTLGLVPD---IRE 415

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
              +    +++    ++   +   T  RE    + F    +  G  +       +   + 
Sbjct: 416 TGFEGILPSVRDGSFNVGMSSITDTAEREEL--VDFV-TYFQAGTLWAQRTGSSVDPDAA 472

Query: 143 L---SGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
                G +      T      +D   A        +V    +E+ AA  A   DA T D 
Sbjct: 473 CGLRVGVAYSTIQETEEIPAKSDACVAAGLPPIEKVVRTHQDEVTAALIAGEVDAMTADS 532

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                  +            ++   +P    + + D+     +      ++   E  
Sbjct: 533 PVT-GFAIKLS-GGALAPAGEVFDSAPYGWPVAK-DSGLAEPLRLALEHLMDTGEYR 586


>gi|302868068|ref|YP_003836705.1| family 3 extracellular solute-binding protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570927|gb|ADL47129.1| extracellular solute-binding protein family 3 [Micromonospora
           aurantiaca ATCC 27029]
          Length = 284

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 14/217 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G ++ G  T       +  +G + GFD +  RA+++ I     K++++  +       + 
Sbjct: 45  GVIRAGTLTDAPPNVFL-KDGKFTGFDNELLRAVAAKI---DLKVEFVGTDFSGLLAQVN 100

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S + D+   ++  T+       + F     F   G  +     I+   QL+G  + V  G
Sbjct: 101 SGKFDV--GSSSITITEARKKTVDFGNGYDFGYFGLDVPAGSPITGFDQLAGKRVVVVQG 158

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +        A      P+            +A   DA+          K   D   +
Sbjct: 159 TVQDDY------ATKQNLDPVRVPDYNSAINQLKAGTADAWIAPAEI--GDKSAADSNGK 210

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +    +S +P A A+ +GD +    ++     ++ 
Sbjct: 211 IKVAAKQLSPTPTAYAVAKGDDKLREALNKGLDEVIA 247


>gi|227876631|ref|ZP_03994741.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Mobiluncus mulieris ATCC 35243]
 gi|227842832|gb|EEJ53031.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Mobiluncus mulieris ATCC 35243]
          Length = 296

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 73/267 (27%), Gaps = 29/267 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA------------------SILGDIKKRGFLKCGINTG 43
            K F +     + L  T+ +  A                  S L   K +  LK  I++ 
Sbjct: 5   RKIFTLLCTASLCLSLTACAGKANHAVDSFDTSTIPEDKEISSLVPAKNKELLKVAIDSP 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
            +            G++VD  RAL+  +      +Q+  ++       + +   D+ +  
Sbjct: 65  YIPAGFFDDKNQATGYEVDVVRALARVLG--IKNVQFSDVDFDSILSQVDNGTYDMAAAA 122

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD- 162
                 R   L +                            G +I  ++ T+ E  L D 
Sbjct: 123 MTVKKSRMRDLNM--VAYIQSGFIYGTQKNNPKNFDYGDPCGFTIAAKSNTSQEELLHDL 180

Query: 163 ---YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                +        +  +  +++         DA  G+ + +   +  N        + +
Sbjct: 181 SETCKETGKTAIKIVADKDQDKLINEVANGSIDAIIGESAIIKYAETRNKN---FASVGE 237

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +P   A  + +            
Sbjct: 238 SFQMAPQGLATAKNNEPLAKATQAGLQ 264


>gi|312863976|ref|ZP_07724212.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|311100389|gb|EFQ58596.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
          Length = 515

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 79/287 (27%), Gaps = 30/287 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K        L+++F    ST A          +L+ G+      F       +NG   
Sbjct: 1   MKKIIVACFAALLLVFGGVSSTQADE--------YLRVGMEAAYAPFNWTQDDDSNGAVP 52

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A    P  ++           AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQIAKKIAEAQGKKPLVVK---TAWTGLIPALTSSKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R     + F    Y      ++      +    L              + L +      
Sbjct: 110 ER--RQEIDFSDSYYRSEPVMVVSSDGDYAKAKSLKDFKDAKITAQQG-VYLYNLIDQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI----LPDIISKS 224
                        +  A  +   D Y  +       +  + +     +            
Sbjct: 167 DVSKQTAMGDFGAMRQALASGIIDGYVSERPEAKTAEEASSKYKMITLKDGGFQVSDDDV 226

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            LA  + +GD++    V+     +   E + +    IN    D T+ 
Sbjct: 227 SLAVGLRKGDSQQMEQVNKVLAGISQEERVKLMDHIINIQPADKTDE 273


>gi|257458172|ref|ZP_05623326.1| putative amino acid ABC transporter, amino acid-binding protein
           [Treponema vincentii ATCC 35580]
 gi|257444466|gb|EEV19555.1| putative amino acid ABC transporter, amino acid-binding protein
           [Treponema vincentii ATCC 35580]
          Length = 275

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 86/258 (33%), Gaps = 13/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M    F  IL +  L   +         N S L  +     L  G++  +   +   + G
Sbjct: 1   MKIKSFFGILLIFSLISCTGRRTETEGINDSSLARVIVNNELVVGVDPSIPPLSFYSSAG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+++D  + ++  +      ++ +P+    R   LQ++ I  ++   +         
Sbjct: 61  QIVGYEIDIAQTVADKLGVK---LKLVPITTANRVAELQNRAIQYIASGFNNNEQNAEHF 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            L+   +        +   +  I  S  + L    I + +       +       N    
Sbjct: 118 LLSIPYLRDALVVVVLRSIEGTIAFSQFTDLRNKRIGMVSDEEMRELVMKSPLYINNGRR 177

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P  + R+E +  A    + DA   ++   Y+      +P  +  + + I+ +  + A  +
Sbjct: 178 PYFYPRMENMLTALDFGQLDAVVMNLLTYYSKTTIEKKP--YAAIGEPITITTYSYAFRK 235

Query: 233 GDTEWYNIVSWTHYAMVT 250
            D E    ++     M  
Sbjct: 236 EDKELAKTMNTFLTDMAN 253


>gi|330814716|ref|YP_004362891.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
 gi|327374708|gb|AEA66059.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
          Length = 265

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 79/249 (31%), Gaps = 14/249 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               +  L I   T  + +A  L        L+ G +     ++         G D D  
Sbjct: 1   MRAVLKALAISLLTISAAHAQSL----TGKTLRIGSDITSPPYSYFNEAKQPTGIDPDLM 56

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL++A      K+Q++    +   L +Q+ + D+++     T +R     + F P    
Sbjct: 57  NALAAA---GNFKVQFIDTRFESLILGMQANKFDVIASGMFVTPVRAK--QIDFIP-YAT 110

Query: 125 DGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G GF++         S   L G  I +  G     T+ D   A         F    E 
Sbjct: 111 AGLGFMVLANSKFSPESADALCGRRIGIIKGAAYISTIKDVCTAQGKSVDIHEFPTSAEA 170

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  +   +A   D++ L             +    I+    L   + +   E    + 
Sbjct: 171 SQAVVSGNVEAQADDVAVLKIAVDK-THGRLRISTKQILYPVVLGLGVSKQHPEIKAALE 229

Query: 243 WTHYAMVTA 251
               A + A
Sbjct: 230 EAL-AKIKA 237


>gi|153827645|ref|ZP_01980312.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
 gi|149737883|gb|EDM52788.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
          Length = 248

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 89/249 (35%), Gaps = 22/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F +++  L +   T  +              +K G++     F  VK + + +GF+
Sbjct: 1   MKHWFNIALAALCLSSATVQAATD-----------VKVGMSGRYFPFTFVKQD-ELQGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +      +  K++++  N    F  L++ +ID +S     T  R+      F  
Sbjct: 49  VDVWNEIGKR---NDYKVEFVTANFSGLFGLLETGRIDTISNQITITDARKA--KYLFSD 103

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG    + K    I  ++ L+G ++ V  G+  E  L  + K  + K +   ++  
Sbjct: 104 PYVIDGAQITVRKGNDAIKGINDLAGKTVAVNLGSNFEQLLRSHDK--DDKINIKTYDTG 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DA+  D  +   L      P +    P    ++       +   +   
Sbjct: 162 IE--HDVALGRADAFVMDRLSALELIEKTGLPLQLAGSPFETIENAWPFVNNEKGQQLQG 219

Query: 240 IVSWTHYAM 248
            V+    AM
Sbjct: 220 EVNKALAAM 228


>gi|139473936|ref|YP_001128652.1| extracellular solute-binding protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134272183|emb|CAM30428.1| extracellular solute-binding protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 287

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 12/245 (4%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 25  SQKSSWNTIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +           
Sbjct: 82  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMVKK 140

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDIS 199
            LS       AG +    +     A       + ++ V  +         R D    D  
Sbjct: 141 DLSDWKEKKAAGASGTEYMK---VAQKQGAELVTYDNVTGDVYLNDVTNGRTDFIPNDYP 197

Query: 200 AL--YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A   +   + +  P+ +V + D+    +     + + D      +      M+    L  
Sbjct: 198 AQKLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMIKDGSLKK 257

Query: 257 TQKNI 261
             +  
Sbjct: 258 ISETY 262


>gi|307727082|ref|YP_003910295.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia sp. CCGE1003]
 gi|307587607|gb|ADN61004.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia sp. CCGE1003]
          Length = 330

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 86/285 (30%), Gaps = 22/285 (7%)

Query: 1   MY-KDF--FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M  K     +  LC+     T  + +AS    L  I++ G ++ G       FA    +G
Sbjct: 47  MKAKRTSGLLGALCVAAATLTVPAQHASAETTLQRIQRTGEVRIGY-ANEAPFAYTTPDG 105

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G   +  R + + +      +  +          L++ + D+++     T  R    
Sbjct: 106 KVTGESPEIARKIFAKMGVKK--VDGVLTEWGSLIPGLRAGRFDVIAAGMYITPER--CK 161

Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +AF    Y      ++ K     + S + +        A     + LA+   A      
Sbjct: 162 QVAFANPQYQIKDTLLVPKGNPKNLHSYADIGKQPDLKLAVMAGAVELANSRDAGVKDAQ 221

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAI 230
            +          A RA R DA  G    +  L        E       D       A A 
Sbjct: 222 LMQVPDTTAQLQAVRARRADAAAGTALTMKGLAAKASDQVEAVANFTDDPKHTGYGALAF 281

Query: 231 IQGDTEWYNIVSWTHYAMVTA-------EELGITQKNINQVSKDT 268
              DT+  + V+   +  +         E  G  + N+   +   
Sbjct: 282 RPEDTDLRDAVNKQLHDWLGTADHLQTVEPFGFDKSNLTTRTAAD 326


>gi|167841279|ref|ZP_02467963.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia thailandensis MSMB43]
          Length = 262

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 71/242 (29%), Gaps = 15/242 (6%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           + +   +  +     L  ++K G L  G       F  +  NG   GF+ D    + + +
Sbjct: 1   MALGAASVSAFAEDELAKVRKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEVGNEL 59

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K++++ L        L++ + D++      T  R      A+           + 
Sbjct: 60  ---RVKVRFIDLPWASVLPGLEAGKFDMVGGPLTVTKAR--MDRYAYTLPIADATDALLK 114

Query: 132 HKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                 I   S + G ++  Q G+     L  Y            +    +  A     R
Sbjct: 115 RTGDASIRQSSDIGGKTVGAQKGSAQLDQLKSYAATLPKPPEIREYVDNNQAYADLATGR 174

Query: 191 CDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             A     S      +   RP    ++ P   +K   A  + +  +           A  
Sbjct: 175 IVAVA--NSVTNIAYVAKQRPGVFSVVQPSFGAKVYYAYCMRKDASS-----KSLLDAFD 227

Query: 250 TA 251
            A
Sbjct: 228 AA 229


>gi|194397854|ref|YP_002037278.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae
           G54]
 gi|194357521|gb|ACF55969.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae G54]
          Length = 266

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L  I+ F  +    A    +   +  +       +  F      G+  GFD
Sbjct: 1   MKK---FSLLLAILPFLVACGNQA-TPKESSSQKTIVLATAGDVPPFDYED-KGNLTGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+   +     +IQ+     +  F  L S      + N  +T  R       +  
Sbjct: 56  IEVLKAVDEKL--SDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAE--KYLYSL 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               +    + +KK  ++S+ Q++G +     GT+    +  + + H      I F   +
Sbjct: 112 PISNNPLVLVSNKKNPLTSLDQIAGKTTQEDTGTSNAQFINHWNQKHTDNPATIDFSGED 171

Query: 181 --EIDAAYRAHRCDAYT 195
             +          D   
Sbjct: 172 IGKRILDLANGEFDFLV 188


>gi|329893506|ref|ZP_08269698.1| Cyclohexadienyl dehydratase [gamma proteobacterium IMCC3088]
 gi|328923680|gb|EGG30990.1| Cyclohexadienyl dehydratase [gamma proteobacterium IMCC3088]
          Length = 383

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 65/225 (28%), Gaps = 15/225 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  ++K   L+ G+      F+     G+  G D++   AL+        +I ++  +
Sbjct: 150 DTLARLEKDKTLRVGVTLDYEPFSYQDNEGNRAGIDIELATALAKEFGY---RIVWVKTS 206

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS----SV 140
                   +    DI       T  R     + F    +  G+  I            ++
Sbjct: 207 WPTLMADAEDNLFDIALSGISITAQR--QHRMMFSAPYHTGGKTAIGRCSSVDELNTLAL 264

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
              +   I V  G T E  +    ++        +      I     +   DA   D   
Sbjct: 265 IDRAETRIIVNPGGTNERFV----RSALTNASIRIHPDNRTIFNELVSGTADAMFTDS-- 318

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + A       PS  V+L   ++       +         I +W  
Sbjct: 319 IEAQLQATKHPSLCVLLDQPLTFQQKGILLQPDPELKKRIDTWLL 363


>gi|295099752|emb|CBK88841.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Eubacterium cylindroides
           T2-87]
          Length = 288

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 21/209 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVG--FAEVKANG 54
           M K   V +   +++     S+    +A  L  IK+ G +  G +       F  +  NG
Sbjct: 3   MKKLVSVVLATTMMIGVAGCSSTTSGSADKLEQIKEAGKIVLGTSPDFPPSEFYILDENG 62

Query: 55  D--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    G D+   +A++  I  +   ++    +       +QS  +D+       T  R+ 
Sbjct: 63  EKQIVGSDISLAQAIADEIGVE---LEIKATDFNGVLANVQSGSVDMAISGFAQTEERKQ 119

Query: 113 SLGLAFRPITYF----DGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166
            +   F          D QG +  K+      ++ +   A++ + A + +     +    
Sbjct: 120 VMQ--FSEGYQREDSEDYQGILTTKENAEKYKTLEEFKAANLTIAAQSGSIQY--ELAMK 175

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              + +   +   +    A  A   DA  
Sbjct: 176 LTDEANIKQYGTTDASALALDAGDIDAVI 204


>gi|261823411|ref|YP_003261517.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261607424|gb|ACX89910.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 263

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 80/262 (30%), Gaps = 18/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+L L   F  +   +       ++   LK G           + N    GFD
Sbjct: 1   MMKKVTLSVLALTTAFLVAGCDSGKS--GTEQEKVLKVGSTGQSYPSGFKQDN-KLVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      ++++  +       L++K++D ++     T  R       F  
Sbjct: 58  VEVTETIAKDLNYK---VEWVTADFSGLMGQLEAKKLDTVANVVAITPAR--QEKYNFAQ 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              F G   + HK    I++++ L G ++    G+     L   F   +       +E  
Sbjct: 113 PYSFYGSQIVTHKDNTDINTLADLKGKTVAGVLGSNHVNNLKKAFA--DGSVTIRTYETR 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-------NDRPSEHVILPDIISKSPLAPAIIQ 232
           +       + R + Y      L A              P     +     K     A+ +
Sbjct: 171 DGAMNDALSKRVEGYVNSRPILLAEINKRNLPFKLVGEPLVIEEVSFPFHKDENGDALRK 230

Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254
                   +         AE+ 
Sbjct: 231 QFDAELTKMREDGRLKALAEKY 252


>gi|284050293|ref|ZP_06380503.1| solute-binding family protein 3 precursor [Arthrospira platensis
           str. Paraca]
          Length = 285

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 84/254 (33%), Gaps = 10/254 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     V +   +   F   +   ++L DI++ G LK G+         +  + G+W+G+
Sbjct: 1   MKNIIRVFLTLTLCSLFPLNAIAGTVLEDIRRTGILKAGVRQDAAPLGYLSPDTGEWEGY 60

Query: 60  DVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            +     L+S +      + P ++Q +      R   +    + +       T      +
Sbjct: 61  CIQLMELLASRLTQQLQLNQPVQVQLVQSTLDNRESIVADGSVHLECGPNTVTRTPPPGM 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             + R I   +        +  I+    +    I V   T T+  ++  +    +     
Sbjct: 121 VYSDRFIATGNHLLVAADNQTLINPDGAMENIIIGVLPNTLTQGFISSRYSLAQI-VQYH 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILP-DIISKSPLAPAII 231
                 +          +A+  D   L    L      P ++ I+P + ++       + 
Sbjct: 180 GTSGRADAVRDVLNREINAFASDGLLLVGEVLRQPDINPQDYAIIPQEPLTCEFYGMIVP 239

Query: 232 QGDTEWYNIVSWTH 245
           +GD  W N ++   
Sbjct: 240 EGDIAWLNTINSLI 253


>gi|308172226|ref|YP_003918931.1| amino acid ABC transporter binding protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605090|emb|CBI41461.1| similar to amino acid ABC transporter (binding protein) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328552036|gb|AEB22528.1| amino acid ABC transporter (binding protein) [Bacillus
           amyloliquefaciens TA208]
 gi|328910300|gb|AEB61896.1| amino acid ABC transporter (binding protein)-like protein [Bacillus
           amyloliquefaciens LL3]
          Length = 263

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 69/214 (32%), Gaps = 13/214 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       FA    NG   GFDVD   A++  I     K+ +  L        LQ+
Sbjct: 33  VLHVGATGQSYPFAYK-ENGKLTGFDVDVMEAVAKKI---NMKLDWKLLEFSGLMGELQT 88

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            ++D +S     T  R+ +    F     + G   ++      I SV+ L G ++    G
Sbjct: 89  GKLDTISNQVAVTGERKKT--YNFTEPYSYAGTQIVVKNDNKDIKSVNDLKGKTVAAVLG 146

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +     L        +  +   +E  E         R DAY    S L A       P  
Sbjct: 147 SNHAKNLESKDPDKKI--NIKTYETQEGTLKDVAYGRVDAYVNSRSLLIAQIKKTGLP-- 202

Query: 214 HVILPDIISKSPLAPAIIQG--DTEWYNIVSWTH 245
             +  D I    +A    +     +    V+   
Sbjct: 203 LKLAGDPIVYEKVAFPFAKDAAHDKIRKKVNKAI 236


>gi|167582829|ref|ZP_02375703.1| cyclohexadienyl dehydratase [Burkholderia thailandensis TXDOH]
          Length = 262

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 78/269 (28%), Gaps = 21/269 (7%)

Query: 1   MYKDFFVSILCLIIL------FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M         C             + +  AS L D+  RG L+         +   + +G
Sbjct: 1   MKITLLALACCAGFAHAQAAREPAAPAAPASRLDDVLARGTLRVCTTGDYKPYTYRREDG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            ++G D+D   +L+ ++    + ++       + F+A    + DI       TL R+   
Sbjct: 61  AFEGIDIDMAASLAKSLGVKTAFVKTTWPTLTDDFVA----KCDIAVGGISTTLERQKH- 115

Query: 115 GLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
            + F      DG+  I+           +        + V  G T E     +F      
Sbjct: 116 -VFFTQPYVTDGKTPIVRCADVERYQTIAQIDQPQTRVIVNPGGTNERFAKQHF----TH 170

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
               VF     I     A   D    D S    L+   +     V           A  +
Sbjct: 171 ARITVFPDNVTIFKQILAGNADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMV 229

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            +GD  +   V    +      EL     
Sbjct: 230 PRGDVVFQQYVDQWLHLARETGELQAISD 258


>gi|66766347|dbj|BAD99042.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio vulgaris]
          Length = 148

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           GI+     FA V  +G   GFDV+    ++  +     K+ + P++       L +K+ID
Sbjct: 30  GIDANYPPFAYVDKSGKPAGFDVESMDWIAKKMG---FKVTHQPMDWDGIIPNLLAKKID 86

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTE 157
           ++      T  R     + F    +   Q FI  K   +++   L G   + VQ GT+  
Sbjct: 87  MVCSGMSITEER--RQKVNFSNPYWNVKQVFIAKKGSTLNTDQILKGKVKLGVQRGTSEA 144

Query: 158 LTLA 161
             L 
Sbjct: 145 EALQ 148


>gi|21492785|ref|NP_659860.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           CFN 42]
 gi|21467210|gb|AAM54873.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           CFN 42]
          Length = 280

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 78/276 (28%), Gaps = 44/276 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +++  ++       + NA  +     R  L          +  +   G+  GFD
Sbjct: 1   MKRTLLLALSLVV------CANNAGAMD----RKTLTIASEGASPPWNAITPQGELAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L   +     +  ++P +      AL   + D +      T  R+ S+   F  
Sbjct: 51  IDVGRDLCRRM---KFECTFVPQDWDGIIPALTVGKFDAIMSGMAITEKRKKSIA--FSK 105

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                    ++ K   +                            L+G ++ V   + +E
Sbjct: 106 PYAGGFNQVVIRKDLNLPPTDTLAELDLTTIDPEKQAKIEELRAALNGRTLGVLRSSNSE 165

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L + F           ++  + +     A R D    D     A   + D     +  
Sbjct: 166 AVLNELF---GKVATIRSYDSQDNMHLDLVAERIDGGLADYFTWKAFLDSTDGGIATLYG 222

Query: 218 PDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           P +        +   + Q D E          A  +
Sbjct: 223 PRLSGGLWGPGVGVGLRQDDGELVAAFDSAIEAATS 258


>gi|27376243|ref|NP_767772.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27349383|dbj|BAC46397.1| blr1132 [Bradyrhizobium japonicum USDA 110]
          Length = 311

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 65/219 (29%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F    A+G+  GF+VD  RAL   I              +    AL S
Sbjct: 81  VIRFLTETDYPPFNYTGADGNPAGFNVDLARALCEEI---KVTCTVQMRRFETLVDALTS 137

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D +  +       ++   + F    Y     F   K   +       L G  + V  
Sbjct: 138 NRGDAIIASMAV--SPQLRARVDFSDPYYRVPARFASRKDAVMPEIRPEYLEGKKVGVIG 195

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E  L   F           +   + + AA R    D   GD  +L       D   
Sbjct: 196 GSAHEAYLKAMF----TDAELHPYPNDDAMRAALRKGEVDFIFGDAISLAFWINGTDSGD 251

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +  A+ +G+      ++W  +
Sbjct: 252 CCAFSGGPFVESRFFGEGIGIAVRKGNDVLRQALNWALF 290


>gi|300309409|ref|YP_003773501.1| glutamine ABC transporter periplasmic protein [Herbaspirillum
           seropedicae SmR1]
 gi|300072194|gb|ADJ61593.1| ABC-type glutamine transport system, periplasmic component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 259

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 7/212 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G       F       +  GFD+D  +A+S A      KIQ +    +  F  L  
Sbjct: 29  TYVVGAGGTYRPFEFETPKKELVGFDIDLIKAISQA---SNFKIQLVSTPWEGIFATLGQ 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              DI+      T  R     + F    +   Q  I +    I+S+S L    + V   T
Sbjct: 86  GDRDIIISGITITDKRAQM--VDFSLPYFPAEQVIITNADAKITSLSDLKKTQVAVVNST 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             ++ +++             F+    +         DA  GD+  +     ++      
Sbjct: 144 AGDIVVSEELGKA--STAIHRFDNTVLMLEELYRGGVDAAVGDVGVIKFYIKSHPEKKFK 201

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           V+      +     A+ +G+ E  + ++    
Sbjct: 202 VVGDSKFVRQYFGIAVKKGNKELLDKINAGLK 233


>gi|225857029|ref|YP_002738540.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae P1031]
 gi|225725079|gb|ACO20931.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus pneumoniae P1031]
          Length = 228

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 14/214 (6%)

Query: 38  CGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
              +     F     V       G D+D  +A++  +      ++ L ++      +LQ+
Sbjct: 1   MATSPDYAPFEFQSLVDGKNQVVGADIDMAQAIADELGVK---LEILSMSFDNVLTSLQT 57

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQA 152
            + D+       T  R+      F    Y +   F++ K        ++ L  A+I  Q 
Sbjct: 58  GKADLAVAGISATDERKEV--FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQK 115

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + +                + E     +A + DA   D     +    N   +
Sbjct: 116 GTVPESMVKEQLPKA----QLTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLA 171

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +   +        A+ +   +   +V     
Sbjct: 172 VATVSLKMKDGDANVVALRKNSDDLKEVVDKVIQ 205


>gi|116252669|ref|YP_768507.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257317|emb|CAK08412.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 292

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 62/213 (29%), Gaps = 15/213 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +      L        S   NA  L    ++G L       + G       G   G+D +
Sbjct: 7   RRMVTCALLAGSFMSLSSIANAFELA---EQGKLTVAFTGDMPGSGWQD--GKLVGYDGE 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +           +       ++QS ++D++     WT  R   + L+     
Sbjct: 62  IMQRIADKLGLKIQPAL---MEWSGTIASVQSGRVDVMLGTMGWTEKRTKIMTLSEPIHY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G +   K     ++ L G  I    G +    L              +++  +  
Sbjct: 119 --FKNGIMQSSKTSWDKLADLEGKKIGTITGFSFVPELKSI-----KDLQLSLYDTSDAA 171

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
                A R DA  GD   +      N   + H 
Sbjct: 172 VRDLIAGRIDAVIGDPPVISYAIKQNPDWNMHF 204


>gi|157372680|ref|YP_001480669.1| arogenate dehydratase [Serratia proteamaculans 568]
 gi|157324444|gb|ABV43541.1| Arogenate dehydratase [Serratia proteamaculans 568]
          Length = 255

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 73/241 (30%), Gaps = 14/241 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             ++  S L  + ++G L+         +  +K +G ++G D+D   +L+ ++    +K+
Sbjct: 14  GSASAQSHLDKVIQQGTLEVCTTGDYKPYTFLKEDGSYEGIDIDMAESLAKSLG---AKV 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGI 137
           +++  + K       + + DI       TL R+    + F  +   DG+   +       
Sbjct: 71  KWVKTSWKTLTPDFVAGKCDIAMGGISVTLQRQR--QVFFADMLDTDGKIPLVRCTDVKK 128

Query: 138 SSVSQLSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                        +   AG T E  +  Y     +            I       + D  
Sbjct: 129 YRTIDQINKPSVRLLEPAGGTNEAFVHAYLPKAKLTLT----HDNVGIFQQLVDKKADVM 184

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D S     +    +         +      A  + + D  W   V    +      E 
Sbjct: 185 ITDASEALYQQKRFPKLCAVNPKKPMQYGE-KAYMLPRDDLSWKLYVDQWLHLSKATGEY 243

Query: 255 G 255
            
Sbjct: 244 Q 244


>gi|229824368|ref|ZP_04450437.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271]
 gi|229786168|gb|EEP22282.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271]
          Length = 535

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 65/224 (29%), Gaps = 30/224 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K      L  +     +           +    L  G+  G   +       ANG   
Sbjct: 1   MKKSLKFLALAFVAFLMVACGA------KKQDTQPLLIGMEAGYPPYNWTQSTNANGAVP 54

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   R +   +  +   +Q +         A+QS +ID++      T 
Sbjct: 55  IKDSKEFANGYDVQIARKIGEKLGRE---VQVVKTEWDGLLPAVQSDKIDMIIAGMSPTA 111

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++ K        ++   +GA +  Q GT     L     
Sbjct: 112 ERAK--EIDFSESYYDSRFVMVVRKDSPYAQAKTLEDFAGAKVSGQQGTLHYDLLKQLKD 169

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           A   +      +    +  A  A + DAY  +     +    N 
Sbjct: 170 AQVEQAQ----DSFPVLRVALEAGKLDAYISEYPEAVSAAAANP 209


>gi|190894162|ref|YP_001984456.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           CIAT 652]
 gi|190699823|gb|ACE93906.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           CIAT 652]
          Length = 280

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 78/276 (28%), Gaps = 44/276 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +++  ++       + NA  +     R  L          +  +   G+  GFD
Sbjct: 1   MKRTLLLALSLVV------CANNAGAMD----RKTLTIASEGASPPWNAITPQGELAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L   +     +  ++P +      AL   + D +      T  R+ S+   F  
Sbjct: 51  IDVGRDLCRRM---KFECTFVPQDWDGIIPALTVGKFDAIMSGMAITEKRKKSIA--FSK 105

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                    ++ K   +                            L+G ++ V   + +E
Sbjct: 106 PYAGGFNQLVIRKDLDLPPTDTSAELDLTTIDPEKQAKIEELRAALNGRTLGVLRSSNSE 165

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             L + F           ++  + +     A R D    D     A   + D     +  
Sbjct: 166 AVLNELF---GKVATIRSYDSQDNMHLDLVAERIDGGLADYFTWKAFLDSTDGGIATLYG 222

Query: 218 PDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           P +        +   + Q D E          A  +
Sbjct: 223 PRLSGGLWGPGVGVGLRQDDGELVAAFDSAIEAATS 258


>gi|145637069|ref|ZP_01792732.1| arginine-binding periplasmic protein [Haemophilus influenzae
           PittHH]
 gi|145269723|gb|EDK09663.1| arginine-binding periplasmic protein [Haemophilus influenzae
           PittHH]
          Length = 200

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 65/209 (31%), Gaps = 27/209 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F      G+  GFD
Sbjct: 1   MKKTLLTAILLGSSIAVSAQ--------------ELTFAMEPSYPPFETTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I       ++          +L++K+ D      D T  R     + F  
Sbjct: 47  VDVANAICQEI---QVTCKFKSETFDSLIPSLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                 ++ R D   GD + L  +     
Sbjct: 154 NAILDLKSGRIDIILGDTAVLSDMISKEP 182


>gi|254489577|ref|ZP_05102779.1| arginine-binding periplasmic protein 1 [Roseobacter sp. GAI101]
 gi|214041747|gb|EEB82388.1| arginine-binding periplasmic protein 1 [Roseobacter sp. GAI101]
          Length = 259

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 75/223 (33%), Gaps = 22/223 (9%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G +     +  V AN +  GFD D    +   I    +   +   +       LQ  
Sbjct: 22  LRIGTSADYPPWEAVDANNEIFGFDRDIGDEICKRI---AATCTWQNQSFDGLLPGLQVG 78

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-------HKKKGISSVSQLSGASI 148
           + D++         R  S  + F          FI+         K     ++ LS   I
Sbjct: 79  RFDVIISGISINEER--SKSVDFSAPYADAPNSFIVLADNPAAAAKSKEDLIAALSSGVI 136

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             Q GTT E  +  +F   N      ++ER +++ +   + R DA   + SA   L  + 
Sbjct: 137 GAQGGTTHEQVIRAHFANAN----VRLYERPDQVMSDILSGRIDAGVMERSAAEPLMDSE 192

Query: 209 DRPSEHVILPDIISKS------PLAPAIIQGDTEWYNIVSWTH 245
                    P +            A A+ +G+T   N V+   
Sbjct: 193 KGGVLVYAGPKLTGVDFEEFGKGQAVALAKGNTVLQNRVNDAV 235


>gi|227501797|ref|ZP_03931846.1| ABC superfamily ATP binding cassette transporter extracellular
           solute-binding protein [Corynebacterium accolens ATCC
           49725]
 gi|227077822|gb|EEI15785.1| ABC superfamily ATP binding cassette transporter extracellular
           solute-binding protein [Corynebacterium accolens ATCC
           49725]
          Length = 295

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 76/225 (33%), Gaps = 9/225 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L  G N     F    ++G+ +G ++D  RA++  +      ++    +      A
Sbjct: 54  DDGVLTAGTNPPYAPFQLKDSHGNLQGVELDLARAVAGVLGLKFQALE---QDFSMILPA 110

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS QID+ +     T   +      F    Y   Q   +             G ++ VQ
Sbjct: 111 VQSGQIDMGASGFTDTA--DRRDEFDFVDHLYAGIQWAELVDGPNKVDPQNPCGLTVAVQ 168

Query: 152 AGTTTEL-TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             T +E   +    +A +     + ++  +    A    R DA + D          ++ 
Sbjct: 169 RTTVSETDDVRPKQEACDGDLTVLSYDTGDNAALAVLMGRADALSADSPVTAWAVNRSEG 228

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                 + D+   SP   A+ + D++     +     ++   E  
Sbjct: 229 KM--RAVGDMFQASPYGFAVPK-DSDLAKASAAALQHLIDTGEYA 270


>gi|254455953|ref|ZP_05069382.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082955|gb|EDZ60381.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 255

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 69/222 (31%), Gaps = 13/222 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             S L  I   G LK G                 +KGFD+D    L+  +      + ++
Sbjct: 19  AESKLDQIIASGELKVGTTGDWDPMTMKDPATNKYKGFDIDVMNELAKDMGVK---VTFV 75

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P   K     + S + D +S +   T  R    G       Y      +        +  
Sbjct: 76  PTEWKTIVSGITSGRYD-ISTSVTKTAKRAEVAGFTSTYYKYGTVPLVLKKNLNKFPTWD 134

Query: 142 QL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            L  +G  I    GT+ E    ++F            E          A R D      S
Sbjct: 135 SLNKNGVKIATTLGTSQEQKAKEFFP----NSTLKSVEAPARDFQEVLAGRADGNIT--S 188

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  A KL    P   ++     + + LA  + + DT W + V
Sbjct: 189 STEANKLVIKYPQLAIVQDGEKNPAFLAMMVPKSDTVWNDYV 230


>gi|38233734|ref|NP_939501.1| hypothetical protein DIP1144 [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199995|emb|CAE49664.1| Putative secreted protein [Corynebacterium diphtheriae]
          Length = 297

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 65/221 (29%), Gaps = 20/221 (9%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +  D+  RG L  G N     F    +N +  G ++D  +A+S+ +           
Sbjct: 47  AAMVPQDLADRGTLVAGANPPFAPFEFKDSNHNIIGMEMDLMQAISAVMGLKYEA---QQ 103

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFIMHKKKGISSVS 141
            +      +L +  ID+ +        R       F          G    +K    S  
Sbjct: 104 QDFSLILPSLSAGTIDVGASGFTDNDER--RENYDFVDFLYAGIQWGV---QKDSSVSRE 158

Query: 142 QLSGASICVQAGTTTELTLADYFKAH-----NMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
              G +I VQ  T  E   A   +             + +   ++   A    R D ++ 
Sbjct: 159 NPCGLTIAVQRTTVAETDDAHPLREKCIAEGKKPVEILPYATSDQAATALVLGRADVFSA 218

Query: 197 DISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           D         +             +I   +P   A+ +G  
Sbjct: 219 DSPVVGWAVERAEGK----LTTTGEIFDAAPYGFAVPKGSP 255


>gi|120402048|ref|YP_951877.1| protein kinase [Mycobacterium vanbaalenii PYR-1]
 gi|119954866|gb|ABM11871.1| serine/threonine protein kinase with extracellular ligand sensor(s)
           [Mycobacterium vanbaalenii PYR-1]
          Length = 586

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 76/239 (31%), Gaps = 13/239 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A++  DI+  G L  G+N          A+G   GFDV+   A++  +   P    Y
Sbjct: 334 AIAATVPADIRGTGRLVIGVNVPYAPMEFKNADGQLVGFDVELMDAVTRVLGLVPD---Y 390

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                     ++     D+       T  RE    + F       G  +       +   
Sbjct: 391 RNTTFDAILPSVVDGTFDVGMS--SVTDTREREELVDFV-TYLEAGTQWARRPGTALGPA 447

Query: 141 SQL---SGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTG 196
           S      G +      T      +D   A  M+    +VF+  +E+  A      DA + 
Sbjct: 448 SACGLKVGVAEATLQATEELPAKSDQCTAAGMEPIEMVVFKNQDEVTTALIKGEVDAMSA 507

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           D        +   R  E V   D+   +P    + +G +     +      ++ + +  
Sbjct: 508 DSPVT-GFAIKLSRG-ELVPAGDVFDSAPYGWPVAKG-SGLTESLRLALEHLIESGDYR 563


>gi|317470323|ref|ZP_07929716.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
 gi|316902231|gb|EFV24152.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
          Length = 265

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 10/215 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLP 82
           AS + D  K   L  G++ G+  F+         KGFD+D  + +S  +  +    +   
Sbjct: 28  ASEVKDSMKGKQLIIGVSDGMAPFSVRDEKTKEMKGFDIDLIKGISEYLGFEY---KLRV 84

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
              +E    L+ K+ID+       T  R+      F  + + +    +++  K I+   +
Sbjct: 85  APMRELTDLLREKKIDLAISGICITDSRQKEFQ--FSDVYFENTLKVMVNTDKNITDRKE 142

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G +I V+ GT+            N      V+  ++++       + DA   D + + 
Sbjct: 143 LEGKTIGVEEGTSNAEYAQTNLSEEN---KIKVYPSMDKVFKDLEKGKIDATVYDATGVD 199

Query: 203 ALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
                        +   + S          + D  
Sbjct: 200 YFMANYKGDKISALDEKLNSAESNYGIMFRKKDPS 234


>gi|315505535|ref|YP_004084422.1| extracellular solute-binding protein family 3 [Micromonospora sp.
           L5]
 gi|315412154|gb|ADU10271.1| extracellular solute-binding protein family 3 [Micromonospora sp.
           L5]
          Length = 284

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 14/217 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G ++ G  T       +  +G + GFD +  RA+++ I     K++++  +       + 
Sbjct: 45  GVIRAGTLTDAPPNVFL-KDGKFTGFDNELLRAVAAKI---DLKVEFVGTDFSGLLAQVN 100

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S + D+   ++  T+       + F     F   G  +     I+   QL+G  + V  G
Sbjct: 101 SGKFDV--GSSSITITEARKKTVDFGNGYDFGYFGLDVPAGSSITGFDQLAGKRVVVVQG 158

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +        A      P+            +A   DA+          K   D   +
Sbjct: 159 TVQDDY------ATKQNLDPVRVPDYNSAINQLKAGTADAWIAPAEI--GDKSAADSNGK 210

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +    +S +P A A+ +GD +    ++     ++ 
Sbjct: 211 IKVAAKQLSPTPTAYAVAKGDDKLREALNKGLDEVIA 247


>gi|2997758|gb|AAC08596.1| cyclohexadienyl dehydratase [Pseudomonas aeruginosa PAO1]
          Length = 268

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 71/246 (28%), Gaps = 18/246 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I + G L+         F+     G + GFDVD  + L+ ++      +     +
Sbjct: 28  SRLDRILESGVLRVTTTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVP---TS 84

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----HKKKGISSV 140
                      + DI        L R+      F      + +  I       +      
Sbjct: 85  WPNLMRDFADDRFDIAMSGISINLERQR--QAHFSIPYLRNSKTPITLCSEEARFQTLEQ 142

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
               G +  V  G T E     + +A+  K   +V      I       + D    D   
Sbjct: 143 IDQPGVTAIVNPGGTNE----KFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDA-I 197

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
              L+         V        +  A  + + +  +   V    +    AE+ G+ ++ 
Sbjct: 198 EARLQSRLHPELCAVHPQQPFDFAEKAYLLPRDE-AFKRYVDQWLH---IAEQSGLLRQR 253

Query: 261 INQVSK 266
           +    +
Sbjct: 254 MEHWLE 259


>gi|222081582|ref|YP_002540946.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726261|gb|ACM29350.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 281

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 65/245 (26%), Gaps = 19/245 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A +L  IK               F  V   G   G+  D    +   +     K   
Sbjct: 25  AHAADLLDKIKTTKVFTVATEARFAPFEFV-EGGKIVGYSADIMEDVMKELPGVELKRL- 82

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139
             L  +     L + + D +  +   T  R                   +  K    I+ 
Sbjct: 83  -DLPWQGILPGLAASRFDYVVTSVTVTPER--MNAYRLSVPIADATMAVLKRKGDAEITK 139

Query: 140 VSQLSGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              ++G  +  QAG+     L  +                +    E  A     R  A  
Sbjct: 140 PEDIAGKPVGSQAGSAQLAALETFATELKASGKADVTVSTYTDFSEAYADLATGRIHAVV 199

Query: 196 GDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
              S    L+    RP     +LP    K+  + A              +  A++ AE +
Sbjct: 200 --NSLPNLLEAARQRPDIFEVVLPTFGPKTYFSWAGRNDADS------TSLNALIDAELI 251

Query: 255 GITQK 259
            + + 
Sbjct: 252 KLNKS 256


>gi|300783424|ref|YP_003763715.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299792938|gb|ADJ43313.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 315

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 86/236 (36%), Gaps = 15/236 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
           NA++   +K+ G L    N          A+G    G++VD  +A+++ +      + + 
Sbjct: 60  NAALPDTVKQAG-LHLASNLQSAPNNFYAADGKTPIGYEVDLAKAIAAKLG---VAVTHQ 115

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISS 139
            +       +LQS +ID+     + T  R+    + F    +  G   ++ K    GI+ 
Sbjct: 116 DMAFGSLITSLQSGRIDLTMAGMNDTKARQA--QIDFVD-YFTSGITIMIRKGNPDGITG 172

Query: 140 VSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              L G ++ V  GT+ +   A       +A          +   +     R  R  A  
Sbjct: 173 PDTLCGKNVAVVQGTSHQKFAAGQSTKCTQAGKPAITVTATDSDNQNQNQLRTGRVQAIL 232

Query: 196 GDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D+ +   +  T        ++P + I   P    + + +T   + V     A++ 
Sbjct: 233 NDLPSAVYISRTAGDGKFFEVVPGEPIDGGPYGIGVNKANTALRDSVQKALQALIA 288


>gi|238061492|ref|ZP_04606201.1| glutamate-binding protein [Micromonospora sp. ATCC 39149]
 gi|237883303|gb|EEP72131.1| glutamate-binding protein [Micromonospora sp. ATCC 39149]
          Length = 325

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 17/217 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK-IQYLPLNAKERFLALQ 93
            LK G++T      E+   G + GFD++  R +++ +  +  + I+++P++ ++R  ALQ
Sbjct: 68  TLKIGVSTTGPLVGELHG-GTYSGFDIEIARYIAAQLGYEGDRRIEWVPVSTEDRVPALQ 126

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQ 151
               D++      T  R     ++F        Q  ++  +    I ++  L      V 
Sbjct: 127 GGDADMVVATFSMTEERAKL--VSFAGPYLVTTQEAMVPTRLKDRIRTIEDLRDPRYKVC 184

Query: 152 AG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
               +TTE  L         +    V + V +      A R DA + D + L        
Sbjct: 185 TSGGSTTEAEL------GKHQIRVFVVKEVGDCVDGILAGRYDAVSSDETILAGFLS--K 236

Query: 210 RPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTH 245
            P + VI+     +   +   +   D    ++V++  
Sbjct: 237 HPKDFVIVDMPFGTSEQIGVGVPISDPALRDLVAFFL 273


>gi|66044402|ref|YP_234243.1| prephenate dehydratase [Pseudomonas syringae pv. syringae B728a]
 gi|63255109|gb|AAY36205.1| Prephenate dehydratase [Pseudomonas syringae pv. syringae B728a]
          Length = 263

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 82/262 (31%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + ++  L++              L  + + G L          ++ ++ +G+++G
Sbjct: 1   MMNLKYSALTALLLGITGMAQAQDYTSHLDKVLQAGQLAVCTTGDYKPYSLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          +    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCADQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W   V    +      E  
Sbjct: 229 DVAWKAYVDQWLHLSKATGEYQ 250


>gi|34762445|ref|ZP_00143445.1| Amino acid-binding protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27887913|gb|EAA24981.1| Amino acid-binding protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 233

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 77/225 (34%), Gaps = 15/225 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K   +  G N     F  ++ +    GFD+D   A+S        + +   +       A
Sbjct: 15  KSNVIYVGTNAEFTPFEYLEKD-RIVGFDIDLLDAISKET---DLEFKIQDMAFDGLLPA 70

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+K++D++      T  R+    +AF    +   Q  I       + S   L+G  + V
Sbjct: 71  LQTKKVDMVIAGMSATPERQK--AVAFSKSYFKAKQVVITKGVDKSLKSFKDLAGKKVGV 128

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G T +  +++             F        A   ++ DA   D     A K T + 
Sbjct: 129 MLGFTGDTVVSEI-----KGVKVERFNAAYAAILALSQNKVDAVVLDSE--PAKKYTANN 181

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + VI      +   A A  + D E  N ++     + +  E  
Sbjct: 182 -KQFVIANIPAEEEDYAIAFRKNDKELINKINAALDKIKSNGEYD 225


>gi|225620812|ref|YP_002722070.1| amino acid-binding protein [Brachyspira hyodysenteriae WA1]
 gi|225215632|gb|ACN84366.1| amino acid-binding protein [Brachyspira hyodysenteriae WA1]
          Length = 254

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 82/220 (37%), Gaps = 18/220 (8%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +I    ++  GI      F  + +NG+  GFD D    +S       S I ++P+  +E 
Sbjct: 30  EISTNQYVNVGIYVYDYPFGYL-SNGNIGGFDYDLMNEISK---ISGSNINFIPMRFEEL 85

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
             AL+SK+ID +      T  R+    L F    Y   Q  ++      I +   L G  
Sbjct: 86  MPALESKKIDAIIAGMTVTDERKQY--LNFSDKYYTSSQAVLVKTDNESIQTEEDLIGKK 143

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALK 205
           + V  GT     +AD   +         F+    I  + +    DA   D +    + + 
Sbjct: 144 VGVIKGT-----VADTMISAKEGIDIERFDTGSSIILSLKVGNVDAAIFDKATCDHFVMY 198

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + + ++ +  P+       A A  + +  + N V+   
Sbjct: 199 DKSIKLADQIKYPE----EDYAIAFRKEENIFLNEVNKAL 234


>gi|254168453|ref|ZP_04875297.1| Bacterial extracellular solute-binding protein, family 3
           [Aciduliprofundum boonei T469]
 gi|197622508|gb|EDY35079.1| Bacterial extracellular solute-binding protein, family 3
           [Aciduliprofundum boonei T469]
          Length = 456

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 81/225 (36%), Gaps = 8/225 (3%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +G +K  I+  L  ++ +  NG+  GF+++  +A+            ++P N  +    L
Sbjct: 34  KGIVKIAIDKNLPPYSYIDQNGNLVGFNIELLKAMEE---YTNFTFDFVPGNWDQCMFRL 90

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQ 151
           Q+ ++D L      T  R  +    F          F        I+ +S++   +I V 
Sbjct: 91  QNGEVDALMATV-PTPQRNKTFA--FTETYMHLYFDFYQRANLKPINKISEIGNHTIAVV 147

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G  TE+ L ++    + K + +     +E       +  D +  +I             
Sbjct: 148 RGDITEIFLKNWMNETHEKVYLVEVATPQEGLKLVNTNSVDLFVYEIHTSSYYIAKY-NL 206

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           +   +        P+A A+ + +      +++    +  + +  I
Sbjct: 207 NNVRLTNIQAFSLPIAIAVRKNEPWLVQELNYAIDKVKNSGKYTI 251


>gi|71083900|ref|YP_266620.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|71063013|gb|AAZ22016.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
          Length = 283

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 37/230 (16%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K   +S+L  ++L    ++        IK       G       +    A+G   GF+V
Sbjct: 4   FKKTILSVLASLLLIGNVYA------DKIK------IGTEGAYPPWNSKDASGALIGFEV 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    L   +  +      +  +      AL  ++ D +      T  R+ +  + F   
Sbjct: 52  ELAEELCKIMGRE---CTIVEQDWDGMIPALLMRKFDAIMAGMSITAERQKT--ITFSQG 106

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGAS------------------ICVQAGTTTELTLADY 163
              +     + K   + S+    G +                  +  +   T   T+   
Sbjct: 107 YADEVAALAVMKGSSLESMDTPEGINLTLGGSAVKKTLKTLTAALAGKTVCTQTGTIHQN 166

Query: 164 FKAHNM--KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           F       K +   ++  +E++    + RCD       A       + +P
Sbjct: 167 FLESGDVGKVNVRTYKTQDEVNLDLTSGRCDVALAAAVAFTDYADKSGKP 216


>gi|269976162|ref|ZP_06183158.1| putative ABC-type amino acid transport/signal transduction systems
           periplasmic component [Mobiluncus mulieris 28-1]
 gi|269935491|gb|EEZ92029.1| putative ABC-type amino acid transport/signal transduction systems
           periplasmic component [Mobiluncus mulieris 28-1]
          Length = 296

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 73/267 (27%), Gaps = 29/267 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA------------------SILGDIKKRGFLKCGINTG 43
            K F +     + L  T+ +  A                  S L   K +  LK  I++ 
Sbjct: 5   RKIFTLLCTASLCLSLTACAGKANHAVDSFDTSTIPEDKEISSLVPAKNKELLKVAIDSP 64

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
            +            G++VD  RAL+  +      +Q+  ++       + +   D+ +  
Sbjct: 65  YIPAGFFDDKNQATGYEVDVVRALARVLG--IKNVQFSDVDFDSILSQVDNGTYDMAAAA 122

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD- 162
                 R   L +                            G +I  ++ T+ E  L D 
Sbjct: 123 MTVKKSRMRDLNM--VAYIQSGFIYGTQKNNPKNFDYGDPCGFTIAAKSNTSQEELLHDL 180

Query: 163 ---YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                +        +  +  +++         DA  G+ + +   +  N        + +
Sbjct: 181 SETCKETGKTAIKIVADKDQDKLINEVANGGIDAIIGESAIIKYAETRNKN---FASVGE 237

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +P   A  + +            
Sbjct: 238 SFQMAPQGLATAKNNEPLAKATQAGLQ 264


>gi|329113273|ref|ZP_08242056.1| Inner membrane amino-acid ABC transporter permease protein YecS
           [Acetobacter pomorum DM001]
 gi|326697414|gb|EGE49072.1| Inner membrane amino-acid ABC transporter permease protein YecS
           [Acetobacter pomorum DM001]
          Length = 519

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 81/244 (33%), Gaps = 18/244 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVK--ANGDWKGFDVDF 63
           + + C+ +L   S+    + +   ++   ++   +    V +            GF+ D 
Sbjct: 15  LFLRCVCLLLAASWLGAGAHVAYAQEEKPIRWAADASSDVPYTFHDLKDQDKLTGFEYDL 74

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L   +    + +Q++  +       LQ    +++    + T   E + G+ F    Y
Sbjct: 75  MQELGKHMG---APLQFVQNDWDGLIPGLQRGLYEMVICGIEMTD--EHAEGIDFSNPYY 129

Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              +  ++ +    + +++ L+G +I     T  E  L +  K          ++   + 
Sbjct: 130 ITSERIVVRRNGPQLKNLADLNGHTIGTIKDTQAERILTENAK-----VQLRTYDEETDA 184

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-EWYNIV 241
                  R DA   D     A    +  P    ++ + I +     A  +G        V
Sbjct: 185 FMDLANGRTDAILIDGPI--AKYYGDTNP-ALQVVGEPIGRVEYGIAFAKGQNVALRAKV 241

Query: 242 SWTH 245
           +   
Sbjct: 242 NAAL 245


>gi|321312473|ref|YP_004204760.1| sulfur-containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis BSn5]
 gi|320018747|gb|ADV93733.1| sulfur-containing amino acid ABC transporter binding lipoprotein
           [Bacillus subtilis BSn5]
          Length = 270

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 5/203 (2%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANGDWKG 58
           M  K  F++IL  +I   ++    +   G  +K+   +  G  T       +   GD  G
Sbjct: 1   MKTKAAFMAILFSLITVLSACGAGSQTTGAGQKKVQTITVGTGTQFPNICFIDEKGDLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+  + L   +     K  +  +      ++L   ++DI++   + +  RE       
Sbjct: 61  YDVELIKELDKRL--PHYKFTFKTMEFSNLLVSLGQHKVDIVAHQMEKSKEREKKFLFNK 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFE 177
               +F  +  ++     I  +  L G  +   A +   L L  + + +   +      +
Sbjct: 119 VAYNHFPLKITVLQNNDTIRGIEDLKGKRVITSATSNGALVLKKWNEDNGRPFEIAYEGQ 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISA 200
              E     ++ R DA      A
Sbjct: 179 GANETANQLKSGRADATISTPFA 201


>gi|312133205|ref|YP_004000544.1| hisj5 [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482551|ref|ZP_07941566.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690625|ref|YP_004220195.1| ABC transporter substrate-binding protein [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|291517268|emb|CBK70884.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|311772406|gb|ADQ01894.1| HisJ5 [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915973|gb|EFV37380.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455481|dbj|BAJ66103.1| putative ABC transporter substrate binding component
           [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 314

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 66/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G N        + A+G    G+D+D  RA+ +    D   +     N  
Sbjct: 67  ESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLDTEIVS---SNFD 123

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  R     + F           +          + L G 
Sbjct: 124 TIIPAIGS-KYDLGIAAFTITKER--MESVDFVSYFTAGMGYAVAAGNPKNVDENDLCGL 180

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ V+ GT  E  +    K               ++  +   A    + D +  D     
Sbjct: 181 NVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSP--V 238

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                     +   L     + P A AI +GD++    V     
Sbjct: 239 VGYAIAQTDGQLEQLGKDFDEVPNAIAIKKGDSQTTEAVQKAMQ 282


>gi|222152544|ref|YP_002561719.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
 gi|222113355|emb|CAR40966.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
          Length = 274

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 76/248 (30%), Gaps = 11/248 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K+  +  L L  L   +   N +     K+   +          F+  + +G   G+D+
Sbjct: 5   KKNLGILSLTLGTLAILAACGNKASNNSGKE--EVFFATVGTTAPFSY-EKDGKLTGYDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  +A+         K+ +        F  L S +  +   N  +T  R       F   
Sbjct: 62  EVAKAVFKD--SSKYKVSFKKTEWSSMFTGLDSSKYQMAGNNVSFTKERAS--KYLFSYP 117

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE- 180
           T       ++ K   I +   +   S  V  GTTT   L DY K++      + +     
Sbjct: 118 TGTTPSVLVVPKDSNIKTYDDIKNHSTQVVQGTTTAAQLEDYNKSNPDHQVTLKYTNENI 177

Query: 181 -EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238
            +I A     + D    D   +    + N        +P    + P       Q   +  
Sbjct: 178 TQILANLNDGKADFKIFDAPTVNT-IIKNQGLDHLKTIPLESKEQPYIYFIFGQDQKDLQ 236

Query: 239 NIVSWTHY 246
             V+    
Sbjct: 237 KFVNKRLK 244


>gi|168333851|ref|ZP_02692094.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 276

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 33/305 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +   I++   +         DI     L+ G++     F+ V  NGD  GF+
Sbjct: 1   MKKFITRILFGGILVAGLTACGGVEESDDI-----LRVGVDLKFPPFSYVDDNGDPAGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A    I  +   ++ +  +      AL++  +DIL      T  R  +    F  
Sbjct: 56  IDVAEAFGEFIGKE---VEIVNTDFGLLLPALETGDVDILIAXMGKTDER--AQKADFSD 110

Query: 121 ITYFDGQGFIMHKK----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
              +     +++K       I++            A           +            
Sbjct: 111 PYRYTYTLALVNKDFAQENEITNDMPEDEFFSIEGAKFIGLAGTKGVYYPQGKGVAVTEV 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             +          + D                +    +  + +  + +    A+  GDTE
Sbjct: 171 TEIGPGLIEVSNGQSDILIASNEVFSFQAADPENTVVYSGIKNQDASN---FAVRLGDTE 227

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
             ++ +    A +  E+    Q           +P V  FL           LGL  D+ 
Sbjct: 228 MLDLANKFI-ASMYEEDGLYDQ------LAPKYDPIVAEFLKN-------PELGL--DFI 271

Query: 297 YRIIR 301
              ++
Sbjct: 272 VNPVK 276


>gi|167824344|ref|ZP_02455815.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Burkholderia pseudomallei 9]
          Length = 106

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K   V+ L +   F  + +  A +L ++K+RG L+ G+      F      G+ 
Sbjct: 1   MKIASLKKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            GFDVD  +A+++ +   P    ++          LQ+ + D++      
Sbjct: 60  VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGI 106


>gi|89099964|ref|ZP_01172835.1| Glutamine-binding periplasmic protein fused to glutamine permease
           [Bacillus sp. NRRL B-14911]
 gi|89085356|gb|EAR64486.1| Glutamine-binding periplasmic protein fused to glutamine permease
           [Bacillus sp. NRRL B-14911]
          Length = 263

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 16/243 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKANG 54
           M K    S + L++L   +  T+ +                   G +T    F   +  G
Sbjct: 1   MKKIQLFSFMMLVMLVLAACGTDDADSSGDGGSSGDDGSKTYTVGTDTTYPPFEF-EEGG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++KG D+D   A++     +  +I+  P++      A+ + Q+D+       T   +   
Sbjct: 60  EYKGIDIDIINAIAEE---EGFEIELKPMDFGGIIPAILADQLDVAIAGMSITD--DRKE 114

Query: 115 GLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            + F    +  G    +      I+S+  L G  + V+ GTT      +  +   +K   
Sbjct: 115 KVDFSDPYFDAGLTLVVSEDNSDITSIDDLKGKVVAVKNGTTGAEHAEEIKEEAGIK-EV 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F     +         D    D   +           +   + D ++      ++ +G
Sbjct: 174 RQFNDSPSMFQEVANGNADVLIEDYPVIA--YAIKTSGLDLKTVGDRLTGDQYGISVKKG 231

Query: 234 DTE 236
           + +
Sbjct: 232 ENQ 234


>gi|313113155|ref|ZP_07798781.1| bacterial extracellular solute-binding protein, family 3
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624494|gb|EFQ07823.1| bacterial extracellular solute-binding protein, family 3
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 279

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 85/255 (33%), Gaps = 31/255 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----------------------LGDIKKRGFLKC 38
           M +     +   + L   +    AS                       L  IK++G +  
Sbjct: 1   MKRLVSAFLAGAMALSLAACGGAASTSTVASSASASGSAAASETAASDLDYIKEKGKMVI 60

Query: 39  GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           G            A+G++ GFD +   A+   +  +P    ++ +N   + + L +K ID
Sbjct: 61  GYTV-YEPMNYTDADGNFTGFDTELATAVCEKLGVEPE---FVEINWDTKVVELDAKSID 116

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
            +      T   +I    A       + Q  ++      SS + L G ++  +AG+  E 
Sbjct: 117 CIWNGMTLTD--DIMANTATTKAYAKNAQVVVVKDGTDYSSTADLVGKTVVAEAGSAGEA 174

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +      +  +   +      +      A   DA   D++   A+       +   I+ 
Sbjct: 175 AIE--GDENLAQADYVSKSVQTDCLMEVAAGTADAAVLDLTLANAMIGEGTDYASLKIVD 232

Query: 219 DIISKSPLAPAIIQG 233
           ++ ++     A  +G
Sbjct: 233 ELNAEE-YGVAFRKG 246


>gi|284007167|emb|CBA72451.1| cyclohexadienyl dehydratase [Arsenophonus nasoniae]
          Length = 257

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 14/245 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  + ++F ++ +   S L  + K   L          +  +  NG ++G D
Sbjct: 2   MKK-----LTVVSLVFLSAAAQAQSHLDRVMKSKTLTVCATGDYRPYTHLLQNGQYEGID 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V     L++++    +K+++             SKQ DI       TL R+ +  L+   
Sbjct: 57  VTMMENLAASLG---AKVKWQKTTWNTLMTDFHSKQCDIAVGGISVTLKRQQATWLSAPL 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178
                        K    ++ QL+  ++ + A    T E     Y           +   
Sbjct: 114 AVDGKIPLVRCDDKAKYQTIEQLNKPTVRLIAPFGGTNEAFAHRYLP----NAQLQLTHD 169

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I       + D    D S     +         +     +     A  + + D  W 
Sbjct: 170 NAAIFQQIIDKKFDVMVTDASEALYQQKHYPTKLCALNPKRPLQYIEKAYMLPRDDMSWK 229

Query: 239 NIVSW 243
             V  
Sbjct: 230 LYVDQ 234


>gi|126652700|ref|ZP_01724861.1| hypothetical protein BB14905_23078 [Bacillus sp. B14905]
 gi|126590549|gb|EAZ84667.1| hypothetical protein BB14905_23078 [Bacillus sp. B14905]
          Length = 274

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 96/272 (35%), Gaps = 29/272 (10%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             S         K    +  G  T       +   G+  G+DV+  RA+   +     + 
Sbjct: 27  GGSNEQKTAQGGKDVQKIIVGTGTQFPNICFIDEKGNLTGYDVELVRAIDEKL--PEYEF 84

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +   +      L+L++++ID ++   +    RE        P   F  +  +  K   I 
Sbjct: 85  ELKTMEFSNLLLSLETRKIDFIAHQMEVNSEREEKFLFNKEPYNVFPLKVTVNEKNNEIQ 144

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+  L G ++ V   + + + +  Y K H++  + +      +++    + R DA     
Sbjct: 145 SIEDLKGKNVSVSPTSNSAVFIEKYNKDHHLGANIVYSSGSVDVNNQLASGRIDAIIT-- 202

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           +            ++  ++ D                    +++   Y ++  +E+ + Q
Sbjct: 203 TPFAVKYYNESNEAQQKVVGD-------------------ALLNSKVYFLLNKDEVKL-Q 242

Query: 259 KNINQVSKDTTNPDV-----QRFLGIDKSSNI 285
           + +++   +     V     +++LG D + + 
Sbjct: 243 ERLDEAIVELKKEGVISNLSKKWLGDDYTVDF 274


>gi|53720989|ref|YP_109975.1| amino acid-binding periplasmic transport protein [Burkholderia
           pseudomallei K96243]
 gi|126439807|ref|YP_001060945.1| amino acid-binding periplasmic transport protein [Burkholderia
           pseudomallei 668]
 gi|126452725|ref|YP_001068244.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106a]
 gi|167721795|ref|ZP_02405031.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei DM98]
 gi|167740770|ref|ZP_02413544.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 14]
 gi|167817988|ref|ZP_02449668.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 91]
 gi|167826348|ref|ZP_02457819.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 9]
 gi|167896425|ref|ZP_02483827.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 7894]
 gi|217423919|ref|ZP_03455419.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 576]
 gi|226193333|ref|ZP_03788943.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237814327|ref|YP_002898778.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei MSHR346]
 gi|242317167|ref|ZP_04816183.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106b]
 gi|254194525|ref|ZP_04900956.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei S13]
 gi|52211403|emb|CAH37394.1| amino acid-binding periplasmic transport protein [Burkholderia
           pseudomallei K96243]
 gi|126219300|gb|ABN82806.1| amino acid-binding periplasmic transport protein [Burkholderia
           pseudomallei 668]
 gi|126226367|gb|ABN89907.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106a]
 gi|169651275|gb|EDS83968.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei S13]
 gi|217392982|gb|EEC33004.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 576]
 gi|225934933|gb|EEH30910.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237502802|gb|ACQ95120.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei MSHR346]
 gi|242140406|gb|EES26808.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1106b]
          Length = 264

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 87  RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLEPTPASLKGKRVGVLQG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 145 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPEAKG 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 203 FAFVGPPVRDDKILGSGIAFGLRKGDDALKARLNAAI 239


>gi|253576620|ref|ZP_04853948.1| amino acid ABC transporter periplasmic protein [Paenibacillus sp.
           oral taxon 786 str. D14]
 gi|251844034|gb|EES72054.1| amino acid ABC transporter periplasmic protein [Paenibacillus sp.
           oral taxon 786 str. D14]
          Length = 274

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 71/228 (31%), Gaps = 32/228 (14%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M K +    + +L  +++     S++       K     K G+  G   F          
Sbjct: 1   MRKTWSLSILMLLSAVLILAGCGSSSGG-----KDDNTFKVGLEAGYAPFNWTQNDDSNG 55

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  + ++  G+DV+  + ++  +      +  +         AL S +ID +     
Sbjct: 56  AVPIDGSSEYAGGYDVEIAKKIADGLGKK---LVIVKTEWDGLVPALTSGKIDAIIAGMS 112

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGIS---SVSQLSGASICVQAGTTTELTLAD 162
            T  R+ +  + F    Y      ++ K        S+   SGA I  Q  T     +  
Sbjct: 113 PTEERKKT--IDFSDNYYKSNLIMVVKKGGPYEGATSIQDFSGAKITAQLNTFHYSVIDQ 170

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               +         +    +  A  +   D Y  ++    +    N+ 
Sbjct: 171 INGVNKQP----AMDNFPAMRVALESGTIDGYVSELPEGVSAATANEN 214


>gi|227114068|ref|ZP_03827724.1| amino acid-binding protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 261

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 78/245 (31%), Gaps = 12/245 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K  FV  L    L  T   T+A              G       F    A  + +GFD+
Sbjct: 3   KKLLFVGALFTTALSTTVLPTSAFAAEP-----TYVVGSGGTYRPFEFENAQKELEGFDI 57

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
                + +    +   I+ +    +  F  L S   DI+      T  R+    + F   
Sbjct: 58  AI---IKAIAKAENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSTP 112

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +   Q  ++ K   I S++ L    + V   +T ++ ++D    +        F+    
Sbjct: 113 YFPAEQSIVVPKGSTIDSIAALKDHKVGVVNSSTADIVVSDVLGKN--STSIKRFDNTPL 170

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +          A  GD+  +     T+     +++      +     A+ +G+ +    +
Sbjct: 171 MLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLRAKI 230

Query: 242 SWTHY 246
           +    
Sbjct: 231 NSGLK 235


>gi|117164568|emb|CAJ88114.1| putative ABC transporter substrate-binding protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 317

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 96/264 (36%), Gaps = 22/264 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S  A +  D+++ G L+ G + G    A     ++    G D+D   A++  +     ++
Sbjct: 59  SVAALLPADVRRSGTLRVGSSIGFPPGAYYPNGSDKAPAGQDIDLADAVAKVLG---VRL 115

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--- 135
           +    + +    AL S + D+ + N   T  R  +  + F      DGQGF + K     
Sbjct: 116 RRQDASFETILPALGSGKYDVGTGNFGVTTERLKT--IDFV-TYVNDGQGFAVKKGNTAI 172

Query: 136 -GISSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             ++ ++QL G ++   AGTT E TL     +  KA    Y   V+        A +  R
Sbjct: 173 EKVTDLTQLCGLTVGTGAGTTFETTLTAQKDECAKAGKKPYDVKVYSENAATLTALQQGR 232

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNIVSWTHYA 247
            D      S +  L+    +P+          +  +  A  +G      +   V      
Sbjct: 233 IDVIM---STINGLRYQASQPASQTTFLGEYHRLDVGFAFKKGSPLTKAFRAAVDELIKD 289

Query: 248 MVTAEELGITQKNINQVSKDTTNP 271
              A  L     + + +     NP
Sbjct: 290 GTYARILRKWGTSASAIETSRINP 313


>gi|325525068|gb|EGD02967.1| cyclohexadienyl dehydratase [Burkholderia sp. TJI49]
          Length = 264

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 15/237 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L ++  RG L+         ++  +A+G ++G D+D   +L+ ++      ++     + 
Sbjct: 35  LDEVLARGTLRVCTTGDYKPYSYYRADGRFEGIDIDMAESLAKSLGVKADYVK----TSW 90

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS----Q 142
               A    + DI       TL R+      F      DG+  I+         +     
Sbjct: 91  PNLTADFVAKCDIAVGGVSTTLERQK--RAFFTQPYVVDGKTAIVRCADADKYQTVAQID 148

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T E     +F   N      V+     I     A + D    D S   
Sbjct: 149 RPDTRVIVNPGGTNERFAKQHFTHAN----LTVYPDNVTIFKQILAGKADVMVTDASETL 204

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L+   +     +           A  + +GD  +   V    +  ++  E      
Sbjct: 205 -LQQKLNPGLCSLHPDKPFQFGEKAYMVPRGDVVFQQYVDQWLHLALSTGEYQAISD 260


>gi|262038365|ref|ZP_06011742.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Leptotrichia goodfellowii F0264]
 gi|261747583|gb|EEY35045.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Leptotrichia goodfellowii F0264]
          Length = 523

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 105/323 (32%), Gaps = 52/323 (16%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M     K+  V +LC + LF   ++          + G L+ G+  G   F  V     N
Sbjct: 1   MKLNLLKNKIVLLLCFLSLFVFGYA----------ENGELRVGMECGYAPFNWVQNNDKN 50

Query: 54  GDWK-------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           G  K       G+DV+  + ++     D   +            AL S  +DI+      
Sbjct: 51  GAVKIDSGYCGGYDVEIAKLIAK--GLDKKLVVVKSEWDALLGPALTSGNVDIVIAGMSP 108

Query: 107 TLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T  R+    L+F    Y      ++    K     S++  +GA I     +T    + D 
Sbjct: 109 TAERK--QSLSFTKPYYESDLVVVVKKDGKYANAKSINDFAGARI-TGQLSTLHYNVIDQ 165

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
            K    +      E    +  A  + + D Y  +     A+      P    +  D  + 
Sbjct: 166 MKGVKKQ---QAMENFPAMIVALDSGKIDGYVSEKPG--AMAAQMSNPELVFVSFDKENG 220

Query: 224 SPL-------APAIIQGDTEWYNIVSWTHYAMVTAEE----LGITQKNINQVSKDTTNPD 272
                     A  + +GD +    ++      ++ E+    +     N  ++ K      
Sbjct: 221 FKYENSEVDVAVGVKKGDEKLVGEINKILD-NISPEQRKQLMEKAISNQPEMKKRDFTGW 279

Query: 273 VQRFLGIDKSS---NIGEALGLT 292
           V  FL  +K +        LG++
Sbjct: 280 VLFFLKNNKKAFLIGTATTLGIS 302


>gi|153809739|ref|ZP_01962407.1| hypothetical protein RUMOBE_00120 [Ruminococcus obeum ATCC 29174]
 gi|149833917|gb|EDM88997.1| hypothetical protein RUMOBE_00120 [Ruminococcus obeum ATCC 29174]
          Length = 283

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 72/272 (26%), Gaps = 30/272 (11%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K               +        +    D   +  LK  +  G   +       +N
Sbjct: 1   MRKSKMWRMLTVAAVAASMTCGIIGVQSVSADD---KKTLKVAMECGYAPYNWTQPDDSN 57

Query: 54  GDWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
           G  +         G+DV   + ++  +  D   ++ + L+      A+QS Q+D +    
Sbjct: 58  GAVQISGSSDYAYGYDVMMAKKIADELGYD---LEIVKLDWDSLVPAVQSGQVDCVIAGQ 114

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             T  R     + F    Y+     ++         + +              +      
Sbjct: 115 SITKER--QQMVDFTDPYYYASIITLVKNDGDYKDAASVEDLKGATVTSQQNTIWYDSCL 172

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                       E    +  A  + +CDA   D+    A  +               +  
Sbjct: 173 PQIPDTDILPAQESAPAMLVALESGKCDAVVTDMPTGKAACVAYPDFKLLDFSGTDGAFE 232

Query: 225 ------PLAPAIIQGDTEWYNIVSWTHYAMVT 250
                  +  ++ +G+ E  + ++     M  
Sbjct: 233 VSDEDINIGISVQRGNDELKDAINGVLKDMTE 264


>gi|119383895|ref|YP_914951.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119373662|gb|ABL69255.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 280

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 76/250 (30%), Gaps = 13/250 (5%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + F    + + I   ++      +    IK+ G +  G       F  V  +G   GF 
Sbjct: 4   RRTFAGLSVSIAIALASAVPALAETTFEKIKRTGTMVVGTEAAYPPFEFV-KDGQITGFG 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++ +      +I+ L L  +     L +++ D ++ +      R          
Sbjct: 63  RDLLDEIARS---WGVEIKQLDLPFQGILPGLLAQKFDFVATSVGINPERAARYAYTLPI 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE---LTLADYFKAHNMKY-HPIVF 176
                           I  V  L+G  +  Q  +  +     L +  KA    +    +F
Sbjct: 120 A-DSTAYAIKRAGNDHIKGVEDLAGKVVATQLASAVDPVAKALDEKLKAEGKGFSELKLF 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDT 235
               +   A      DA    +  L    L N+RP    ++        L A  +   D 
Sbjct: 179 PTFNDSFLAVANGTADAAMAGLPVL--QNLMNERPGVFELVGQAADTQSLNAWVVRPEDK 236

Query: 236 EWYNIVSWTH 245
           +  + ++   
Sbjct: 237 DLRDAINAVV 246


>gi|282881889|ref|ZP_06290540.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Peptoniphilus lacrimalis 315-B]
 gi|281298298|gb|EFA90743.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Peptoniphilus lacrimalis 315-B]
          Length = 274

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 73/257 (28%), Gaps = 35/257 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K   + +   ++L   +           +    LK G+  G   F             
Sbjct: 1   MRKILKLLVALSLVLTLVACGK-----DKKEDENVLKVGMECGYAPFNWTQLDDKNNGAQ 55

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +    ++  G+DV   + ++ A+      +  +         ALQ+ +ID++      T 
Sbjct: 56  IDGANEYAGGYDVMMAQKVAQALGKK---LVIVKTEWDGLPPALQAGKIDLIMAGMSPTP 112

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R   +   F    +      I+    K +   S++   GA I  Q  T     +     
Sbjct: 113 DRAKEVQ--FTEPYWKSQYVMIVKRGSKYENAKSLNDFKGAKISAQLNTVHYDIIDQIDG 170

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
               +          E+  A ++   D Y  ++    +++           L  +     
Sbjct: 171 VIKEEAQ----SSFPELRVALQSGVIDGYVAEVPEAKSVESATKD------LVSVNFPEG 220

Query: 226 LAPAIIQGDTEWYNIVS 242
               +          V 
Sbjct: 221 QGFTVKDNSNLVSAAVK 237


>gi|253583351|ref|ZP_04860549.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
 gi|251833923|gb|EES62486.1| amino acid-binding protein [Fusobacterium varium ATCC 27725]
          Length = 249

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 12/214 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G N     +  ++ +    GFD+DF  A+   I  +   +Q++ +       A
Sbjct: 18  AAKKLYVGTNAEFKPYEYLEGD-KITGFDIDFMNAIGKEIGYE---VQWVNMGFDGLLPA 73

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ  ++D +      T  R+ ++  +   +        I+++   I    +L    + VQ
Sbjct: 74  LQMNKVDAVIAGMSQTPERQKAVDFSMPYMFTKSEHYVIVNENSPIVKKEELKDKKVGVQ 133

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT  E           +   P ++          +  +  A      +  A        
Sbjct: 134 IGTIQEEFTIA------LGGIPQIYNAWTGALMDLQQDKISAVIIADVSGNAYLANMKGL 187

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  ++ D    + +A    +G+TE    V+   
Sbjct: 188 KKVDVVIDNQPGASIA--FRKGETELVKSVNEAI 219


>gi|239940209|ref|ZP_04692146.1| putative ABC transporter substrate-binding protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239986697|ref|ZP_04707361.1| putative ABC transporter substrate-binding protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291443639|ref|ZP_06583029.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
 gi|291346586|gb|EFE73490.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
          Length = 322

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 74/206 (35%), Gaps = 15/206 (7%)

Query: 21  STNASIL-GDIKKRGFLKCGINTG-LVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  A ++   I+KRG L+ G +             +    G ++D    ++  +   P  
Sbjct: 56  AAAADLVPEAIRKRGTLRIGASADASPPLGFYATDDKTRIGSEIDIATLVADTLGLKP-- 113

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-- 135
            Q+  ++ +  F+ L S + D +  N   T  R+      F      D   F   K    
Sbjct: 114 -QFEEVSWENLFVGLDSSKFDAVLSNVTVTEERKE--KYDFA-TYRLDNIAFEAKKGSGW 169

Query: 136 GISSVSQLSGASICVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            +   + ++G +I V +GT  E  L ++     KA         F++  +   A ++ R 
Sbjct: 170 TVKEPADVAGKTISVSSGTNQEKILVEWSEENAKAGRKPVDIKYFQKDTDYYLALQSGRI 229

Query: 192 DAYTGDISALYALKLTNDRPSEHVIL 217
           DA+ G          T  +      L
Sbjct: 230 DAHLGPSPTAAYHVATAGQSEIIGQL 255


>gi|221369460|ref|YP_002520556.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
 gi|221162512|gb|ACM03483.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
          Length = 308

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F  ++ L  +  T+    + +  +I+     +  ++      A  K +G  +GF+
Sbjct: 22  MTNPRFGGLVALAFMAATTLPAQSQV-AEIRDS--YRVALDGTFAPHAMPKLSGGVEGFN 78

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +   +    S++            ALQ+   D L         R  S  L F  
Sbjct: 79  VDLAQLIGERLG---SEMTVDAAQFSGLIPALQAGTYDFLVAPVTVNQER--SENLLFTE 133

Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F++         +    G +I V  G+     L D+   +      + F   
Sbjct: 134 GFMDTNFAFVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEYGW--TVVPFGTN 191

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A    R DA     +   A       P    +  +I +      A    D    N
Sbjct: 192 TDAVEAVATGRADANLSGAT--VAAWAALQNP-AVDLSYEIQTGLVWGLAFRLDDAATRN 248

Query: 240 IVSWTH 245
            V    
Sbjct: 249 RVDLVL 254


>gi|167913106|ref|ZP_02500197.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 112]
          Length = 251

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 17  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 73

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 74  RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLEPTPASLKGKRVGVLQG 131

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 132 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPEAKG 189

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 190 FAFVGPPVRDDKILGSGIAFGLRKGDDALKARLNAAI 226


>gi|24378751|ref|NP_720706.1| putative amino acid ABC transporter, permease protein, glutamine
           transport system [Streptococcus mutans UA159]
 gi|24376619|gb|AAN58012.1|AE014873_8 putative amino acid ABC transporter, permease protein, glutamine
           transport system [Streptococcus mutans UA159]
          Length = 517

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 65/211 (30%), Gaps = 26/211 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------- 53
           M K     +  L +LF    +  A          +L+ G+      F   + N       
Sbjct: 1   MKKTILSCLAALFMLFIGVTNAQAD--------NYLRVGMEAAYAPFNWTQDNSSNGAVP 52

Query: 54  --GDWK---GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             G  +   G+DV   + ++  +   P  ++      +    AL S +ID++      T 
Sbjct: 53  IEGTKQYANGYDVQTAKKIAKTLGKKPLIVK---TKWEGLVPALTSGKIDLIIAGMSPTK 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +    L+  S      +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLVVRKDSKYAKAKNLNDFSGAKVT-SQQGVYLYNLINQIP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                       ++  A  ++  DAY  +  
Sbjct: 167 KVSRQTAMGDFSQMRQALASNVIDAYVSERP 197


>gi|291523436|emb|CBK81729.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 271

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 21/287 (7%)

Query: 1   MY-KDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M  K     IL   IL  T +   N     +  ++  +  G +     +  +  +G   G
Sbjct: 1   MKGKRVIAGILLAGILAVTLAGCKNTDNTKEETEKHVITLG-SDNYPPYNYLNEDGVPTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D +        +     +++ + +N +++   ++S +ID +                 +
Sbjct: 60  IDAELATEAFKRMGY---QVEVVQINWEKKKELVESGEIDCIMGCFSM---EGRLDDYRW 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFE 177
                   Q   +++   I  +S L G ++ VQ+ T  E    +       K  + I   
Sbjct: 114 AGPYIASRQVVAVNENSDIYKLSDLEGKNLAVQSTTKPEGIFLNRTDERIPKLGNLISLG 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E I         DA      ++       D      IL + +  + +  A  + D   
Sbjct: 174 HRELIYTFLGKGYVDAVAAHEESVVQYMKDYDAS--FRILEEPLMITGIGVAFAKDDDRG 231

Query: 238 Y-NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
               +  T       EE+     ++  + K   +P  Q++L +D   
Sbjct: 232 ICEQMDQTL------EEMRQDGTSLKIIEKYLDDP--QKYLEVDDLG 270


>gi|309812145|ref|ZP_07705903.1| ABC transporter, substrate-binding protein, family 3 [Dermacoccus
           sp. Ellin185]
 gi|308433832|gb|EFP57706.1| ABC transporter, substrate-binding protein, family 3 [Dermacoccus
           sp. Ellin185]
          Length = 308

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 63/227 (27%), Gaps = 13/227 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             I K G L  G +          A+G   +G D+D   A+++ +     K+ +   +  
Sbjct: 60  AAIAKEGTLTIGSDASYAPNEFTAADGKTIQGMDIDLLNAVAAKLG---LKLTFQNGDFG 116

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
                + + +      +      R  +  +                            G 
Sbjct: 117 TLIGGVNAGKYPAAISSFTINAERLKTANM--VQYYSAGTAWVTAKGNPKKLDPDNACGL 174

Query: 147 SICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +I VQ  T  +             A       +      ++ A   A + D +  D    
Sbjct: 175 TIGVQKDTVQQTDDLPARNKKCTAAGKKPITIVSEVAQSKVTADLIAGKVDGFAADSP-- 232

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            A        ++   +    + +P    + + +T +   +S    A+
Sbjct: 233 VANWAVAKNDAKLEKVGSKYASAPYGIVVKKDNTAFAEAISKALEAL 279


>gi|254166534|ref|ZP_04873388.1| Bacterial extracellular solute-binding protein, family 3
           [Aciduliprofundum boonei T469]
 gi|289596080|ref|YP_003482776.1| putative PAS/PAC sensor protein [Aciduliprofundum boonei T469]
 gi|197624144|gb|EDY36705.1| Bacterial extracellular solute-binding protein, family 3
           [Aciduliprofundum boonei T469]
 gi|289533867|gb|ADD08214.1| putative PAS/PAC sensor protein [Aciduliprofundum boonei T469]
          Length = 456

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 81/225 (36%), Gaps = 8/225 (3%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +G +K  I+  L  ++ +  NG+  GF+++  +A+            ++P N  +    L
Sbjct: 34  KGIVKIAIDKNLPPYSYIDQNGNLVGFNIELLKAMEE---YTNFTFDFVPGNWDQCMFRL 90

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151
           Q+ ++D L          + +   AF          F        I+ +S++   +I V 
Sbjct: 91  QNGEVDALMATV---PTPQRNKSFAFTETYMHLYFDFYQRASLKSINKISEIGNHTIAVV 147

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G  TE+ L ++    + K + +     +E       +  D +  +I             
Sbjct: 148 RGDVTEIFLKNWMNETHEKVYLVEVATPQEGLKLVNTNSVDLFVYEIHTSSYYIAKY-NL 206

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           +   +        P+A A+ + +      +++    +  + +  I
Sbjct: 207 NNVRLTNIQAFSLPIAIAVRKNEPWLVQELNYAIDKVKNSGKYTI 251


>gi|168185298|ref|ZP_02619962.1| sodium/hydrogen exchanger family protein [Clostridium botulinum Bf]
 gi|182671655|gb|EDT83616.1| sodium/hydrogen exchanger family protein [Clostridium botulinum Bf]
          Length = 161

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 21/166 (12%)

Query: 1   MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     +  +II              T+ +   S + +IK+ G L  G       +  
Sbjct: 1   MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDEIKESGKLVVGTCADYPPYEF 60

Query: 50  ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
              +    +  GFD+   + ++  +      ++   +       ALQS  +DI+    + 
Sbjct: 61  HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICV 150
           T  R+    + F  I Y   Q  ++  +      S+ +  G  I V
Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLEEFKGKKIGV 161


>gi|254186473|ref|ZP_04892990.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|157934158|gb|EDO89828.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei Pasteur 52237]
          Length = 286

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 52  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 108

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 109 RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLEPTPASLKGKRVGVLQG 166

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 167 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPEAKG 224

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 225 FAFVGPPVRDDKILGSGIAFGLRKGDDALKARLNAAI 261


>gi|227495202|ref|ZP_03925518.1| ABC superfamily ATP binding cassette transporter amino acid-binding
           protein [Actinomyces coleocanis DSM 15436]
 gi|226831654|gb|EEH64037.1| ABC superfamily ATP binding cassette transporter amino acid-binding
           protein [Actinomyces coleocanis DSM 15436]
          Length = 364

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 84/306 (27%), Gaps = 41/306 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS----------------ILGDI-----------KKR 33
           M K    +++ L  L  T  +  +                  + ++           K++
Sbjct: 65  MKK--VTALITLTALSVTGLAACSDPETPKAAETANTFDVNTIEEVPEIAALVPAALKEK 122

Query: 34  GFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  G +T          +G    G+D+    AL+  +     +             +L
Sbjct: 123 GVLLNGASTDYAPAEFRAEDGQTPVGYDIQITEALAKVMGLKKGET--QHAEFASIIPSL 180

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            + + DI + +   T  R     +             +        +   + G ++ + +
Sbjct: 181 GT-KFDIGASSFTITPER--LDQVNMISYVQVGSSYAVQKGNPNNFNPQDVCGKTVGILS 237

Query: 153 GTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           GT  +  +A        A       +  +   +        + DA   D S         
Sbjct: 238 GTYQQEFIAAESKKCEDAGKEAVKVMAHDLNTDAITKLVGGQYDAVLSDSSVTGYAISQT 297

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
           +   E   + D+I   P   A+ + D E    +      ++    L     N        
Sbjct: 298 NGAIE--QVGDVIEAEPQGIAVAKDDIELAKAIQQAMQYLMDKGYLKQMLDNFGAGDAAL 355

Query: 269 TNPDVQ 274
              ++ 
Sbjct: 356 NQAELN 361


>gi|323137830|ref|ZP_08072905.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
 gi|322396833|gb|EFX99359.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
          Length = 293

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 72/265 (27%), Gaps = 30/265 (11%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS------------ILGDIKKRGF--LKCGINTGLVGF 47
            +      L L+     + +                 L      G   ++         F
Sbjct: 16  RRPALFGGLALLSFLAGATAGETPATAPPSFWDSNRTLEKPDLSGVRQIRFLTEDDFPPF 75

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             + A+G   GF+VD  RA+ + +            + +    +L     D +  +    
Sbjct: 76  NFLSADGQVAGFNVDLARAICAEL---DVPCTIQRRSWELLIPSLDDNSGDAIIASLAIN 132

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFK 165
              E    + F    +     F M     +   S   +    + V  G+  E  L  ++ 
Sbjct: 133 Y--ETRKQVDFTAPYFLTPGRFAMRTDTTLKSASPDAIGDRPVAVVGGSRHEAFLKAFYP 190

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                   + FE       A +A R  A+ GD   L       +        +       
Sbjct: 191 KA----TLVPFETPALARNALKAGRVQAHFGDAVTLSYWLNGAEAGGCCEFRDGPFTDPR 246

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTH 245
                +  A+ +G+ +    + +  
Sbjct: 247 FFGEGVGIAVKKGNNQLRRALDYAL 271


>gi|222152518|ref|YP_002561693.1| glutamine ABC transporter glutamine-binding protein/permease
           [Streptococcus uberis 0140J]
 gi|222113329|emb|CAR40917.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus uberis 0140J]
          Length = 516

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 76/264 (28%), Gaps = 27/264 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------- 53
           M K        L++LF      +A          +L+ G+      F   + +       
Sbjct: 1   MRKFLMSCFAALLLLFAGVSQADADQ--------YLRVGMEAAYAPFNWTQDDNSNGAVP 52

Query: 54  ----GDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ ++      ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTNQYANGYDVQVAKKVAKSLNKKLLVVK---TSWTGLIPALTSGKIDMIAAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++      +    L   +            +    + + 
Sbjct: 110 ERKKEIA--FSDSYYTSEPVIVVKADSKFAKAKSLDDFAGAKITAQQGVWHVNLIPQING 167

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           +K          ++  A  +   D Y  +       +  N      V+          A 
Sbjct: 168 VKAQT-PMGDFSQMRQALSSGVIDGYISERPEAMTAENANSAFKMVVLKKAFTVNESDAA 226

Query: 229 AIIQGDTEWYNIVS-WTHYAMVTA 251
             +    +   IV   T  A ++A
Sbjct: 227 IAVGMRKDDPRIVQVNTVLADLSA 250


>gi|157694047|ref|YP_001488509.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157682805|gb|ABV63949.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus SAFR-032]
          Length = 295

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 15/219 (6%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I + G      +     F+ +  N    GFD+D   A+S  +  +P + +Y         
Sbjct: 69  ILEDGKFIFAASGEFHPFSYMDGN-QMSGFDIDVGNAISDKLGLEPIQKKYK---FAGIV 124

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             ++S + D    +      R+  + L      Y+ G          I     L G  I 
Sbjct: 125 EGVKSGKFDAAVASHTINEERKKHVLL--SKPYYYSGPQIFTRPGADIEQADDLKGKEIA 182

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  G++            +    P  ++       A    + DA   D +          
Sbjct: 183 VSKGSSYAD-----IAKKHSGQEPKYYDSDVVALEALANGKHDAVVTDFATGA----EAM 233

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +    +   + + +S  A A+ + + +    ++    A+
Sbjct: 234 KKKLKIEAQERLGQSEQAIAVSKENEQLIKEINDAIDAL 272


>gi|90422249|ref|YP_530619.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           BisB18]
 gi|90104263|gb|ABD86300.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris BisB18]
          Length = 318

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F    A+G+  GF+VD  RAL   I              +    A+ S
Sbjct: 88  VIRFLTETDYPPFNFTGADGNPAGFNVDLARALCEEI---KVTCTVQMRRFETLLDAVAS 144

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
            + D +  +   T        + F    Y     F+  K   +       L G  +   +
Sbjct: 145 NRGDAIIASLAVTPQMRA--RVDFTDPYYRAPARFVSRKDGVLAEMRPEYLEGKKVGAIS 202

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G++ E  L   F         + +   + + AA R    D   GD  +L       D   
Sbjct: 203 GSSHEAYLKVMF----TDAELVPYPNDDALRAALRRGEVDYIFGDAISLAFWINGTDSAD 258

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +  A+ +G+      ++W  +
Sbjct: 259 CCAFSGGPFVESRYFGEGVGIAVRKGNDLLRQALNWALF 297


>gi|315656987|ref|ZP_07909872.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315492379|gb|EFU81985.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 298

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 79/281 (28%), Gaps = 36/281 (12%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNASILGDIK------------KRGFLKCGIN 41
           M K             L       ++    +     IK             R  L+  ++
Sbjct: 5   MKKISAAAGAVLLAGTLASCAGSTSAAGVKSYNFDSIKPDPEIVAMVPQANRETLRVAMD 64

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                   +  N    G++VD  +ALS  +     KI     +       +     D+  
Sbjct: 65  IPYSPAMFLDDNNQPTGYEVDVLKALSRLMGVSELKIS--DEDFDAIIPKVNDGTYDLGM 122

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTEL 158
            +      R          +  +   GFI   + G           G  +  ++ T+ E 
Sbjct: 123 ASITIKKSRMAQ-----VNMISYIQAGFIYGTQGGNPKNFDPANPCGLKVAAKSETSQEN 177

Query: 159 TLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            L D      KA       +  +  E++     A   DA  G+   +   +  N +    
Sbjct: 178 ALQDVSASCLKAGKPAIQIVSSDNQEDLIQQVAAGTLDAIIGESPIMAYAESRNPK---F 234

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + +    +P  PAI + + E    V      M+    L 
Sbjct: 235 ATVGEAFHVAPQGPAIAKDNPELAKAVQAGLQKMIDTGLLN 275


>gi|325677375|ref|ZP_08157040.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Rhodococcus equi ATCC 33707]
 gi|325551838|gb|EGD21535.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Rhodococcus equi ATCC 33707]
          Length = 598

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       V +   + GFD +  RA+++ +     +++++  +       + 
Sbjct: 87  GKLTVGTLSDAPPSICVNSQNVFTGFDNELLRAVAAKLG---LQVEFVGTDFAGLLAQVA 143

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
             + D+ S +   T  R   +G  F     F     ++     I     L+ +  I V  
Sbjct: 144 GHRFDVGSSSITTTDARRDLVG--FTNGYDFGYFALVVPNGSAIKGFPDLTSSVRIGVVQ 201

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     + D +  + +   P+ F       A  +  + DA+     +  A         
Sbjct: 202 GT-----VQDDYVVNTLGLDPVKFPDYNTAYANLKTGQIDAWV--APSQQAQGAIAPGDP 254

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             ++       + +  A+ +      + ++    A++ 
Sbjct: 255 ASIVQNTFSLNNYVGWAVAKDRQPLIDALNSGLDAVIA 292


>gi|149198749|ref|ZP_01875792.1| hypothetical protein LNTAR_02267 [Lentisphaera araneosa HTCC2155]
 gi|149138185|gb|EDM26595.1| hypothetical protein LNTAR_02267 [Lentisphaera araneosa HTCC2155]
          Length = 258

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 82/234 (35%), Gaps = 23/234 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F   I  L  L  TS  ++   +  I      + G +           +G ++G + D
Sbjct: 2   KHFIPLIFFLSALLLTSCQSSKENVAPI------RVGTSADYYPIIFK-KDGQYQGVEAD 54

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              ALS  +      IQY+ L       AL  ++IDI+      T  R+ ++   F    
Sbjct: 55  LAEALSIELG---RPIQYVELPFSSLIPALNGRRIDIIMAGMSITEERKRNVK--FMDSY 109

Query: 123 YFDGQGFIMHKKKG------ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               Q  ++   +        ++    SG  + V   TT E     Y      K     +
Sbjct: 110 MDISQMMLIRTAEMGRFRKPGNNYYVNSGMIMGVIGDTTGESLAQKYL----TKDKIKAY 165

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             +++   A ++ + D +  D   +++    N +      +   +SK  LA  +
Sbjct: 166 ANIDDAVKALKSKQIDCFIHDAPYIWSY-TNNTKDRSLTGVYWDLSKEHLAWGV 218


>gi|53726094|ref|YP_104476.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei ATCC 23344]
 gi|52429517|gb|AAU50110.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei ATCC 23344]
          Length = 273

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 39  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 96  RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLEPTPASLKGKRVGVLQG 153

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 154 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPEAKG 211

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 212 FAFVGPPVRDDKILGSGIAFGLRKGDDVLKARLNAAI 248


>gi|291517269|emb|CBK70885.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
          Length = 300

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 64/224 (28%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +   G L  G +T       +  +G    GFDVD  +A+++        I        
Sbjct: 52  DSVTSDGTLTVGADTSYAPAEFLAEDGKTPVGFDVDLSKAIAAVFGLKEETIS---STFD 108

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + D+   +   T  R     + F           +          S L G 
Sbjct: 109 SIIPSVGS-KYDLGISSFTVTKER--MQAVDFVTYFKAGSTYVVQKGNPNKVDSSNLCGV 165

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ GTT E  +                    +   ++  A  + +   +  D +   
Sbjct: 166 KVAVQTGTTQEEEVNKANEQCKADGKDAIDIQSSKLQTDVTTAVASGKASIFYADSTVSA 225

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                         L +     P A AI +GDT+    V     
Sbjct: 226 --YAIKQTGDTLETLGEDAGGVPEAVAIKKGDTKTAEAVQKAIQ 267


>gi|309776365|ref|ZP_07671352.1| CjaC protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915884|gb|EFP61637.1| CjaC protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 259

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 12/221 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     +  +++       +      +    ++  L    N+G   +  V   G+  G
Sbjct: 1   MKKLITGMMAVVMMAGLAGCGSKDDGNKEGGNTEKKELTVYTNSGYKPYEMVDEKGNLYG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D     +         +++  ++      +++  + DI      +T  R     + F
Sbjct: 61  FDIDVMNEAAKLAGY---TVKWEDVDFDGIVPSVKQGKADIGIAGITYTEERAE--QVDF 115

Query: 119 RPITYFDGQG---FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             + Y         +  K  G+     + G  I  Q GT  E  L      + +K     
Sbjct: 116 SEVYYAGEDAQNYVLTMKDSGMKKTEDIKGKKIGTQMGTIQESILNSLQDEYKLKLDKRK 175

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
                ++    +    DA   + +    L   N   + +  
Sbjct: 176 A--YSDMVLEMKKGVIDAMVVEKAVAEELAADNSDLTFYKF 214


>gi|23335784|ref|ZP_00121017.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bifidobacterium longum
           DJO10A]
 gi|189439799|ref|YP_001954880.1| amino acid ABC transporter/signal transduction systems periplasmic
           protein [Bifidobacterium longum DJO10A]
 gi|189428234|gb|ACD98382.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Bifidobacterium longum DJO10A]
          Length = 313

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 66/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G N        + A+G    G+D+D  RA+ +    D   +     N  
Sbjct: 66  ESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLDTEIVS---SNFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  R     + F           +          + L G 
Sbjct: 123 TIIPAIGS-KYDLGIAAFTITKER--MESVDFVSYFTAGMGYAVAAGNPKNVDENDLCGL 179

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ V+ GT  E  +    K               ++  +   A    + D +  D     
Sbjct: 180 NVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSP--V 237

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                     +   L     + P A AI +GD++    V     
Sbjct: 238 VGYAIAQTDGQLEQLGKDFDEVPNAIAIKKGDSQTTEAVQKAMQ 281


>gi|207092330|ref|ZP_03240117.1| ABC-type polar amino acid transport,periplasmic component
           [Helicobacter pylori HPKX_438_AG0C1]
          Length = 249

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 70/239 (29%), Gaps = 11/239 (4%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           ++I FF  F   + +   +  +  +  G       F      G   G+DV+  R L+  +
Sbjct: 1   MVIGFFWGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKEL 60

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 I++   +       L+S + D+++     T  ++            + G   ++
Sbjct: 61  GVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSLPYSYSGTIMLV 116

Query: 132 HKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
            K    I  +  + G        +T          A       +  + + +        R
Sbjct: 117 RKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSMAQALLLVAQKR 170

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            D       A+     T+      +           +  I +   +   +++     ++
Sbjct: 171 ADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLI 229


>gi|149914483|ref|ZP_01903013.1| periplasmic binding protein, putative [Roseobacter sp. AzwK-3b]
 gi|149811276|gb|EDM71111.1| periplasmic binding protein, putative [Roseobacter sp. AzwK-3b]
          Length = 238

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 70/251 (27%), Gaps = 33/251 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +                        +  ++ G       +  +   G   GF+
Sbjct: 1   MKKIILSTAALAFSANLA------------MAQDVVRLGTEGAYPPWNFLNDAGQVDGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L           Q++  +       L S   D +      T  R+    + F  
Sbjct: 49  RELGDELCDRA---QLTCQWVTNDWDSIIPNLVSGNYDAIIAGMSITDERD--QVIDFTQ 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                     +   + I     L+   I  Q+GT     +A+           + F   E
Sbjct: 104 NYTPPDPSAYLAMSEDI----DLTAGVIAAQSGTIQAAYIAE------QGATLVEFATPE 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA R    DA   D S L  +    +     ++ PD+    PL   +  G  E    
Sbjct: 154 ETIAAVRNGEADAVLADKSFLTPIA--EEDAELMIVGPDV----PLGGGVGMGIRESDAE 207

Query: 241 VSWTHYAMVTA 251
           +  T  A + +
Sbjct: 208 LRDTFDAAIQS 218


>gi|169829528|ref|YP_001699686.1| polar amino acid transport system substrate-binding protein
           [Lysinibacillus sphaericus C3-41]
 gi|168994016|gb|ACA41556.1| polar amino acid transport system substrate-binding protein
           [Lysinibacillus sphaericus C3-41]
          Length = 272

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 104/296 (35%), Gaps = 35/296 (11%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASILGDIKKRG-----FLKCGINTGLVGFAEVKANG 54
           M K  F  +L L  L       ++         +G      +  G  T       +   G
Sbjct: 1   MKKILFYMLLLLTALLTACVEKSDGDSNEQKTAQGGEDVQKIIVGTGTQFPNICFIDEKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DV+  RA+   +     +     +      L+L++++ID ++   +    RE   
Sbjct: 61  NLTGYDVELVRAIDEKL--PEYEFDLKTMEFSNLLLSLETRKIDFIAHQMEVNSEREEKF 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                P   F  +  +  K   I S+  L G ++ V   + + + L  Y K H++  + +
Sbjct: 119 LFNKEPYNVFPLKVTVNEKNNEIQSIEDLKGKNVSVSPTSNSAVFLEKYNKDHHLGANIV 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 +++    + R DA     +            ++  ++ D               
Sbjct: 179 YSSGSVDVNNQLASGRIDAIIT--TPFAVKYYNESNEAQQKVVGD--------------- 221

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-----QRFLGIDKSSNI 285
                +++   Y ++  +E+ + Q+ +++   +     V     +++LG D + + 
Sbjct: 222 ----ALLNSKVYFLLNKDEVKL-QERLDEAIVELKKEGVISKLSKKWLGDDYTVDF 272


>gi|91781143|ref|YP_556350.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693803|gb|ABE37000.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 305

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 11/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81
               L  I  R  +  G+  G   F  +       +G +VD    +   +  +   +Q +
Sbjct: 54  ADPTLEKIASRHQIAVGVLIGGSPFGSLDPQTQQPRGINVDLANDIGKRLGVN---VQLV 110

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            +    R   LQ  ++DIL  N ++   R   L     P     G      K  GI+   
Sbjct: 111 SVQPSTRVQFLQQGKVDILIANMEYNPQRGEILDHVPTPYYRVGGTAI-TPKTSGITKWE 169

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISA 200
            L G  +C+  G++    + + + A      P  F    +   A R   C A   D    
Sbjct: 170 DLRGKPVCISQGSSYIRPIVEKYGA-----VPRAFPGASQSLLALRGGSCVAAVHDAAPL 224

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           LY L+  +    ++  +   +  +P    + QG+ +    +       
Sbjct: 225 LYPLQQHDPEWRDYRTIQPELVPAPSVIWVRQGEKDTAAKLDAIVRDW 272


>gi|76812114|ref|YP_331572.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1710b]
 gi|121601611|ref|YP_994617.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei SAVP1]
 gi|124386286|ref|YP_001027549.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei NCTC 10229]
 gi|126450282|ref|YP_001082553.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei NCTC 10247]
 gi|167000121|ref|ZP_02265944.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei PRL-20]
 gi|167847868|ref|ZP_02473376.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei B7210]
 gi|238561574|ref|ZP_00441854.2| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei GB8 horse 4]
 gi|254175196|ref|ZP_04881857.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei ATCC 10399]
 gi|254201552|ref|ZP_04907916.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei FMH]
 gi|254206888|ref|ZP_04913239.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei JHU]
 gi|254258840|ref|ZP_04949894.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1710a]
 gi|254298719|ref|ZP_04966170.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 406e]
 gi|254357443|ref|ZP_04973717.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei 2002721280]
 gi|76581567|gb|ABA51042.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei 1710b]
 gi|121230421|gb|ABM52939.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei SAVP1]
 gi|124294306|gb|ABN03575.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei NCTC 10229]
 gi|126243152|gb|ABO06245.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei NCTC 10247]
 gi|147747446|gb|EDK54522.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei FMH]
 gi|147752430|gb|EDK59496.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei JHU]
 gi|148026507|gb|EDK84592.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei 2002721280]
 gi|157808481|gb|EDO85651.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 406e]
 gi|160696241|gb|EDP86211.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei ATCC 10399]
 gi|238524357|gb|EEP87790.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia mallei GB8 horse 4]
 gi|243063927|gb|EES46113.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           mallei PRL-20]
 gi|254217529|gb|EET06913.1| putative lysine-arginine-ornithine-binding periplasmic protein
           [Burkholderia pseudomallei 1710a]
          Length = 264

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 87  RKFDAINSAMNATDQR--RQAIDFTTVIYRVPTQLIARADSGLEPTPASLKGKRVGVLQG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 145 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPEAKG 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 203 FAFVGPPVRDDKILGSGIAFGLRKGDDVLKARLNAAI 239


>gi|166032743|ref|ZP_02235572.1| hypothetical protein DORFOR_02458 [Dorea formicigenerans ATCC
           27755]
 gi|166027100|gb|EDR45857.1| hypothetical protein DORFOR_02458 [Dorea formicigenerans ATCC
           27755]
          Length = 280

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 83/264 (31%), Gaps = 18/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55
           M K   +S L +  +  +          D K+           G       F  V   G+
Sbjct: 1   MKKKKVLSTLLIAGMVASMMVGCGKSADDKKESDNSGVTTYTVGTEGAYPPFNLVNEKGE 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+   +A+     +   + +Y        F AL+S +ID+++        RE    
Sbjct: 61  PDGYDIAVMKAIDD--LNPDVEFKYEATGWDGIFTALESGKIDVIASQCGKNEERE--QK 116

Query: 116 LAFRP-ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
             F            +  K +   S  V+ ++G +I           L +Y K H  K  
Sbjct: 117 YLFPDIPYTETQAAIVFKKDRTDISSDVNSIAGKTIVSATSGAQTNWLENYNKEHPDKAA 176

Query: 173 PIVFE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPA 229
            I++    + ++       R DA+   I       L        +  LP           
Sbjct: 177 DIMYADGDMSKMLQEVINGRADAHIASIKVTADYVLKEQGLDNELECLPFETGDETTTYM 236

Query: 230 IIQGD---TEWYNIVSWTHYAMVT 250
           +++ D    +   I+  +   ++ 
Sbjct: 237 LLRQDESGEKLKKIIDDSLKTLIE 260


>gi|332040045|gb|EGI76430.1| extracellular solute-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 300

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 82/246 (33%), Gaps = 11/246 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    ++  ++ L  T+ S +A  L DI+K+G  K         F  ++ +G   GF  D
Sbjct: 18  RSVARTLAVILALSVTALSAHAD-LADIQKKGVFKVATEDDYQPFNFIQ-DGKPVGFHAD 75

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L + +     K+Q   L       ++ + Q D+       T  R       F P  
Sbjct: 76  MLADLQTFMAKKSVKVQQEILPWTGLLASVAAGQYDMAYTGALVTEERLKV--FNFAPPF 133

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTEL---TLADYFKAHNMK-YHPIVFE 177
                 +I       +  +  LSG ++ VQAG+        L    K    K    + + 
Sbjct: 134 ASAQHFYIKRAGDKSLGDIPTLSGKTVGVQAGSALLARLPELEAMLKKVGGKLGKVVEYP 193

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E  A     R D      + + A  +   +P        +      A  I + + E 
Sbjct: 194 SYPEAMADLANGRLDYVID--AVVPANTIVAAKPKVFAKGVAVSGGGFAAWPIPKNNPEL 251

Query: 238 YNIVSW 243
             +++ 
Sbjct: 252 LKLMTE 257


>gi|312141964|ref|YP_004009300.1| abc transporter substrate binding lipoprotein [Rhodococcus equi
           103S]
 gi|311891303|emb|CBH50624.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus
           equi 103S]
          Length = 598

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       V +   + GFD +  RA+++ +     +++++  +       + 
Sbjct: 87  GKLTVGTLSDAPPSICVNSQNVFTGFDNELLRAVAAKLG---LQVEFVGTDFAGLLAQVA 143

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152
             + D+ S +   T  R   +G  F     F     ++     I     L+ +  I V  
Sbjct: 144 GHRFDVGSSSITTTDARRDLVG--FTNGYDFGYFALVVPNGSAIKGFPDLTSSVRIGVVQ 201

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     + D +  + +   P+ F       A  +  + DA+     +  A         
Sbjct: 202 GT-----VQDDYVVNTLGLDPVKFPDYNTAYANLKTGQIDAWV--APSQQAQGAIAPGDP 254

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             ++       + +  A+ +      + ++    A++ 
Sbjct: 255 ASIVQNTFSLNNYVGWAVAKDRQPLIDALNSGLDAVIA 292


>gi|154684861|ref|YP_001420022.1| YxeM [Bacillus amyloliquefaciens FZB42]
 gi|154350712|gb|ABS72791.1| YxeM [Bacillus amyloliquefaciens FZB42]
          Length = 263

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 67/212 (31%), Gaps = 9/212 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       FA    NG   GFDVD   A++  I     K+ +  L        LQ+
Sbjct: 33  VLHVGATGQSYPFAYK-ENGKLTGFDVDVMEAVAKKI---NMKLDWKLLEFSGLMGELQT 88

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            ++D +S     T  R+ +    F     + G   ++      I SV+ L G ++    G
Sbjct: 89  GKLDTISNQVAVTDERKKT--YNFTEPYSYAGTQIVVKNDNKDIKSVNDLKGKTVAAVLG 146

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +     L        +      +E  E         R DAY    S L A       P +
Sbjct: 147 SNHAKNLESKDPDKKINMK--TYETQEGTLKDVAYGRVDAYVNSRSVLIAQIKKTGLPLK 204

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               P +  K     A      +    V+   
Sbjct: 205 LAGDPIVYEKVAFPFAKDAAHDKIRKKVNKAI 236


>gi|224370332|ref|YP_002604496.1| predicted fusion protein, periplasmic substrate-binding protein
           (N-terminal) / sensory box regulatory protein
           (C-terminal) [Desulfobacterium autotrophicum HRM2]
 gi|223693049|gb|ACN16332.1| predicted fusion protein, periplasmic substrate-binding protein
           (N-terminal) / sensory box regulatory protein
           (C-terminal) [Desulfobacterium autotrophicum HRM2]
          Length = 926

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 78/255 (30%), Gaps = 20/255 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K         +++        A+          +  G +     F  +   G  +GF+
Sbjct: 1   MNKILLFFFGTTVLVALWVVPALAAP---------VTVGGDHNFPPFEYLNDKGVPEGFN 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+S A+      I+       +   AL+  + ++L      T  R     + F  
Sbjct: 52  IDIIMAVSRAM---DMGIKIELGPWNQVRTALERGETEVL-AGMYRTPQRAE--KVDFAV 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +     I  + Q  G  I +Q G        D      M    ++ + ++
Sbjct: 106 PHYISTYSVFVRNGSPIKGIDQCRGKRIGLQKGDLYH----DIAVERQMSTRLVLEDDLQ 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++       R D      +        N        L D I +     A+ QG+     +
Sbjct: 162 DVIENLAQGRVDCAVISRAQGM-QIAKNMGIQNIRPLSDPILQGRYCIAVAQGNANLLAM 220

Query: 241 VSWTHYAMVTAEELG 255
           ++   + + T+ E  
Sbjct: 221 INEGLFIIKTSGEFD 235


>gi|307328903|ref|ZP_07608072.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
 gi|306885413|gb|EFN16430.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
          Length = 320

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 14/196 (7%)

Query: 23  NASILGDIKKRGFLKCGINTG-LVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            A +   I+ RG L+ G +             +    G ++D    ++  +        +
Sbjct: 59  AAKVPAAIRARGTLRIGGSADASPPLGFYATDDKTRIGSEIDLATLVADTLGLKTD---F 115

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138
             ++ +  F+ L S + D +  N   T   +      F      D   F   K     + 
Sbjct: 116 QAVSWENLFVGLDSSKFDGVFSNVTVTE--DRKEKYDFA-TYRLDDLAFEAKKGTSWRVK 172

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM----KYHPIVFERVEEIDAAYRAHRCDAY 194
           S   ++G ++ V +GT  E  L D+ K +            F++  +   A ++ R DAY
Sbjct: 173 SPKDVAGKTVSVASGTNQEKILVDWSKQNQKAGRKPVDIKYFQKDTDYYLALQSGRIDAY 232

Query: 195 TGDISALYALKLTNDR 210
            G          +  +
Sbjct: 233 FGPHPTSAYHVASAGQ 248


>gi|269303360|gb|ACZ33460.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila pneumoniae LPCoLN]
          Length = 259

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 73/250 (29%), Gaps = 18/250 (7%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K    FF + + +++L  TS  +       I +      G N     F  V A G+  
Sbjct: 1   MIKQIGRFFRAFIFIMLLSLTSCES------KIDRNRIWIVGTNATYPPFEYVDAQGEVV 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +       ++         L L+  +ID +      T  R+  + L 
Sbjct: 55  GFDIDLAKAISEKLGKQLEVREF---AFDALILNLKKHRIDAILAGMSITPSRQKEIALL 111

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                       +  +      +     +S+ VQ GT  E  L               F+
Sbjct: 112 PYYGDEVQELMVVSKRSLETPVLPLTQYSSVAVQTGTFQEHYLL-----SQPGICVRSFD 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTE 236
              E+    R  +      + S    +             LP           + +   E
Sbjct: 167 STLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPE 226

Query: 237 WYNIVSWTHY 246
               +     
Sbjct: 227 EIQTIQQAIT 236


>gi|330939038|gb|EGH42494.1| prephenate dehydratase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 262

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 82/262 (31%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + ++  L++              L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKYSALTALLLGITGMAQAQDYTSHLDKVLQTGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+      F
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQK--KAFF 115

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 DG+  ++         + +   ++     T       + F   ++    + F  
Sbjct: 116 SNTLDVDGKIPLVRCADQALYQT-VEQINLPSVRLTEPAGGTNEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W   V    +      E  
Sbjct: 229 DVTWKGYVDQWLHLSKATGEYQ 250


>gi|118587431|ref|ZP_01544856.1| glutamine ABC transporter, permease/substrate-binding protein
           [Oenococcus oeni ATCC BAA-1163]
 gi|118432081|gb|EAV38822.1| glutamine ABC transporter, permease/substrate-binding protein
           [Oenococcus oeni ATCC BAA-1163]
          Length = 468

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +     F   K NG + G DV+  RA++     +   +   P++       + S Q+D 
Sbjct: 21  TDVTYPPFELQKKNGTYTGIDVEIIRAIAKK---EGFTMTLKPISFNSGAQMVLSGQMDG 77

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +      T  R+      F    Y  G  + + KK  I+ +SQL G ++ ++ GT +   
Sbjct: 78  IIAAMTITSERKKV--YDFSKPYYRTGIIWAVSKKSHITKLSQLKGKTVALKTGTASADY 135

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                K +  K     F     +          A               +     +    
Sbjct: 136 AKSLQKKYGFK--ITYFSDSNTMYNDVVVGNSAA--TFEDQSVMKYAIKNGLQLKIPSNK 191

Query: 220 IISKSPLAPAIIQGDTE 236
           I +      A+ +G  E
Sbjct: 192 IGNAGYYGFAVKKGKNE 208


>gi|172059175|ref|YP_001806827.1| arogenate dehydratase [Burkholderia ambifaria MC40-6]
 gi|171991692|gb|ACB62611.1| Arogenate dehydratase [Burkholderia ambifaria MC40-6]
          Length = 270

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 76/240 (31%), Gaps = 15/240 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            S L D+  RG L+         ++  + +G ++G D+D   +L+ ++      ++    
Sbjct: 38  GSRLDDVLARGTLRVCTTGDYKPYSYYRTDGRFEGIDIDMGESLAKSLGVKADFVKTSWS 97

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-- 141
           N    F+A    + DI       TL R+    + F      DG+  I          +  
Sbjct: 98  NLTNDFVA----KCDIAVGGISTTLERQK--RVFFTQPYVVDGKTAIARCADADKYQTVA 151

Query: 142 --QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                   + V  G T E     +F   N      V+     I     A + D    D S
Sbjct: 152 QIDRPETRVIVNPGGTNERFAKQFFTHAN----LTVYPDNVTIFKQILAGKADVMVTDAS 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               L+   +     V           A  + +GD  +   V    +  +++ E      
Sbjct: 208 ETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVAFQQYVDQWLHLALSSGEYQAISD 266


>gi|329295744|ref|ZP_08253080.1| family 3 extracellular solute-binding protein [Plautia stali
          symbiont]
          Length = 83

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 1  MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
          M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1  MKKMMLSTLIAAASLFAVTQQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADASGKFTGI 60

Query: 60 DVDFCRALSSAIFDDPSKIQ 79
          DVD CRA ++A+F D SK+ 
Sbjct: 61 DVDVCRAAAAAVFGDASKVN 80


>gi|227550833|ref|ZP_03980882.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|293379248|ref|ZP_06625394.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|293573051|ref|ZP_06683992.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E980]
 gi|227180028|gb|EEI61000.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|291606870|gb|EFF36251.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E980]
 gi|292642044|gb|EFF60208.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 530

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 81/292 (27%), Gaps = 30/292 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW- 56
           M K+     +    +F      + +   +       + G+  G   F        N    
Sbjct: 1   MKKNMVSVAVLFAFVFSLFSVGSLANADEKTPSDEFRVGMEAGYAPFNWSQQTDENNALP 60

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +      +  +         ALQS +ID +      T 
Sbjct: 61  IQGQNSYAGGYDVQIAKKVADGLGKK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTA 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F    Y      ++ K        S++ LSGA I  Q  T     +     
Sbjct: 118 ERRK--EIDFTDPYYESQLVVVVQKDGKYAKAKSLADLSGAKITAQLNTFHYTVIDQIPD 175

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKS 224
               +      +    +  A  +   D Y  +          N           D    +
Sbjct: 176 VQKQQ----AMDNFSAMRTALASGMIDGYVSERPEGVTATSVNKDLEMLEFSGADGFQTN 231

Query: 225 P----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           P    ++  + +GD +    V+     +   E   I  + +      T + +
Sbjct: 232 PEDVQISVGMRKGDPDIQK-VNQILSGISNDERTKIMDQAVKDQPAATDSEE 282


>gi|91763029|ref|ZP_01264993.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717442|gb|EAS84093.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
          Length = 283

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 37/230 (16%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K   +S+L  ++L    ++        IK       G       +    A+G   GF+V
Sbjct: 4   FKKTILSVLASLLLIGNVYA------DKIK------IGTEGAYPPWNSKDASGALIGFEV 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    L   +  +      +  +      AL  ++ D +      T  R+ +  + F   
Sbjct: 52  ELAEELCKIMGHE---CTIVEQDWDGMIPALLMRKFDAIMAGMSITAERQKT--ITFSQG 106

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGAS------------------ICVQAGTTTELTLADY 163
              +     + K   +  +    G +                  +  +   T   T+   
Sbjct: 107 YADEVAALAVMKGSSLEGMDTPEGINLTLGGSAVKKTLKTITAALAGKTVCTQTGTIHQN 166

Query: 164 FKAHNM--KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           F       K +   ++  +E++    + RCD       A       + +P
Sbjct: 167 FLESGDVGKVNVRTYKTQDEVNLDLTSGRCDVALAAAVAFTDYADKSGKP 216


>gi|322616869|gb|EFY13777.1| hypothetical protein SEEM315_15879 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618108|gb|EFY15000.1| hypothetical protein SEEM971_05253 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625779|gb|EFY22598.1| hypothetical protein SEEM973_09052 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626229|gb|EFY23039.1| hypothetical protein SEEM974_05850 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632644|gb|EFY29389.1| hypothetical protein SEEM201_06548 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638989|gb|EFY35682.1| hypothetical protein SEEM202_10253 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641921|gb|EFY38550.1| hypothetical protein SEEM954_15949 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644193|gb|EFY40738.1| hypothetical protein SEEM054_02787 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649517|gb|EFY45949.1| hypothetical protein SEEM675_03446 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655423|gb|EFY51731.1| hypothetical protein SEEM965_14168 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660820|gb|EFY57051.1| hypothetical protein SEEM19N_10338 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662884|gb|EFY59091.1| hypothetical protein SEEM801_18937 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668068|gb|EFY64227.1| hypothetical protein SEEM507_21401 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674172|gb|EFY70266.1| hypothetical protein SEEM877_13578 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675475|gb|EFY71549.1| hypothetical protein SEEM867_03567 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683111|gb|EFY79127.1| hypothetical protein SEEM180_11142 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686805|gb|EFY82783.1| hypothetical protein SEEM600_19135 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195304|gb|EFZ80484.1| hypothetical protein SEEM581_08889 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199196|gb|EFZ84291.1| hypothetical protein SEEM501_00460 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202991|gb|EFZ88024.1| hypothetical protein SEEM460_02751 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207453|gb|EFZ92401.1| hypothetical protein SEEM020_07088 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213793|gb|EFZ98572.1| hypothetical protein SEEM6152_19665 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217436|gb|EGA02155.1| hypothetical protein SEEM0077_21237 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219971|gb|EGA04444.1| hypothetical protein SEEM0047_21403 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226486|gb|EGA10693.1| hypothetical protein SEEM0055_16084 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231458|gb|EGA15571.1| hypothetical protein SEEM0052_14601 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235899|gb|EGA19978.1| hypothetical protein SEEM3312_13569 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240468|gb|EGA24511.1| hypothetical protein SEEM5258_10861 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245361|gb|EGA29361.1| hypothetical protein SEEM1156_16511 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246726|gb|EGA30698.1| hypothetical protein SEEM9199_07641 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253582|gb|EGA37410.1| hypothetical protein SEEM8282_15423 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255349|gb|EGA39119.1| hypothetical protein SEEM8283_19863 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323266834|gb|EGA50320.1| hypothetical protein SEEM8285_18944 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269040|gb|EGA52496.1| hypothetical protein SEEM8287_03727 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 256

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 76/250 (30%), Gaps = 20/250 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+  + L +      S  A    +IK+   L+ G+       A         GFD
Sbjct: 1   MKKVYFMFFILLSLSSIY--SAMAKPWQEIKESKELRVGVPGDYAPLAFHNRQNKLIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I ++P +       L + + DI       T  R     L+   
Sbjct: 59  IDMAYSLGKAL---HLNILFVPSSWSTLSADLAADKFDIAMGGVTETPGRRKQFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +          ++     S+  +   G  I V  G T +  +  + +        I    
Sbjct: 116 LKNGKIALTQCNRINDFKSLGDIDRKGVRIVVNPGGTNQDYVDKHIR----YADVIHERD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQG 233
            +      R    D    D   L      N  P         ILPD  +       + + 
Sbjct: 172 NDATLQRIRERSADVMFTD--LLEGTYYQNKEPGVFCVSTKSILPDTANNKVY--MMAKY 227

Query: 234 DTEWYNIVSW 243
           +    + V+ 
Sbjct: 228 NQYLLDAVNS 237


>gi|292900663|ref|YP_003540032.1| substrate-binding protein [Erwinia amylovora ATCC 49946]
 gi|291200511|emb|CBJ47640.1| putative substrate-binding protein [Erwinia amylovora ATCC 49946]
          Length = 256

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 72/245 (29%), Gaps = 6/245 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            + +L     ++  S L  + +   L          +  ++ +G ++G D+   ++L+  
Sbjct: 7   AVALLLLAGSASAQSHLDRVMQSKTLTVCTTGDYKPYTYLRPDGGYEGIDISLAQSLAKT 66

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   ++++    K        KQ DI       TL R+ +   A    +        
Sbjct: 67  LGAE---VKWVATTWKTLTADFTGKQCDIALGGVSVTLKRQQTAWFASPLDSDGKIPLVR 123

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              K    ++ QL+  ++ +            +  A   +    +F     I       +
Sbjct: 124 CADKNKYRTIKQLNKPAVRLIEPAGGTN--EAFAHAFLPQAKLTLFHDNVTIFQQLVDKK 181

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D    D S     +    +         +      A  + + D  W   V    +    
Sbjct: 182 ADVMITDASEALYQQKRYPQLCAINAEKPLQYGE-KAWMLPRDDISWKMYVDQWLHLGQA 240

Query: 251 AEELG 255
             E  
Sbjct: 241 NGEYQ 245


>gi|145627843|ref|ZP_01783644.1| arginine ABC transporter periplasmic-binding protein [Haemophilus
           influenzae 22.1-21]
 gi|144979618|gb|EDJ89277.1| arginine ABC transporter periplasmic-binding protein [Haemophilus
           influenzae 22.1-21]
          Length = 200

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 66/209 (31%), Gaps = 27/209 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGASVAASAQ--------------ELTFAMQPTYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++           L++K+ D      D T  R     + F  
Sbjct: 47  VDVTNAICQEI---QATCKFKSETFDALIPNLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
                 ++ R D   GD + L  +     
Sbjct: 154 NAILDLKSGRIDIIFGDTAVLADMISKEP 182


>gi|119961730|ref|YP_948804.1| amino acid ABC transporter [Arthrobacter aurescens TC1]
 gi|119948589|gb|ABM07500.1| putative amino acid ABC transporter [Arthrobacter aurescens TC1]
          Length = 265

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 75/231 (32%), Gaps = 16/231 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T  +++ S L  I   G L    +     F     +G   GFD+D    L+  +  + 
Sbjct: 30  SSTPAASSESGLKLINA-GKLTVCSDVPYEPFEFQ-KDGKIVGFDMDIAAELAKDVKAE- 86

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +      A E   AL    +     +   T +R+    + F      D    +     
Sbjct: 87  LNVVDSSFEAIETGTALTGCDVS--ISSISITDVRK--NVMDFSTPYLDDDLTLVATSAS 142

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI ++    G  + VQ  TT      D             FE    +  A +A   DA  
Sbjct: 143 GIDNLDGAKGKKVGVQQATTGAQYAKD------KGIDAQQFEDSGLLVQALKAGTIDAAV 196

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           G+ S    L       S    + D  +   L  +I +G+T   + V+ T  
Sbjct: 197 GNQSV---LGYAIKDDSNLKRVEDYATGEKLGISIKKGNTAMADAVNATLK 244


>gi|187921005|ref|YP_001890037.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187719443|gb|ACD20666.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 270

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 11/213 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  G++     ++ +  NG   GFDV+  RA+++ +        +   +      ++ 
Sbjct: 36  GKIVAGVDANNKPYSYID-NGKMTGFDVELVRAIAAKLG---LTADFRAQDFAGLLPSVA 91

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152
           ++Q+D+ + +   T  R     + F                  I + V+ +    I V  
Sbjct: 92  NQQVDLAAGSISITKERLKM--VDFSEGYLTGLLSVGTLPDSTIGADVTSVKDKRIGVVQ 149

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  +     Y          + F  +     A R    D Y  D + L  L+       
Sbjct: 150 GTIEDTYSQSYLP----GAQIVRFPNINAGFLALRNKYIDGYFIDKTLLEGLQGKYPDLK 205

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               L    S  P    + +G+ +    V+   
Sbjct: 206 LADKLDISASNLPAGFPMRKGNVKLEAAVNKAI 238


>gi|307132475|ref|YP_003884491.1| arogenate dehydratase [Dickeya dadantii 3937]
 gi|306530004|gb|ADM99934.1| Arogenate dehydratase [Dickeya dadantii 3937]
          Length = 288

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 74/231 (32%), Gaps = 11/231 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  ++++G LK         +  ++A+GD++G D+   ++L+ ++      ++++  + K
Sbjct: 56  LDQVQEQGVLKVCTTGDYKPYTSLRADGDYEGIDIAMAQSLAKSLGVK---VEWVKTSWK 112

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
                 QS + DI       TL R+     +                K    +++Q++  
Sbjct: 113 TLMPDFQSGKCDIAMGGISVTLERQKKAFFSSMLDVDGKIPLVRCDDKDKYQTIAQINQP 172

Query: 147 SICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           S+ V      T E  +  +          +       I       + D    D S     
Sbjct: 173 SVRVIEPAGGTNEAFVHAHLPNA-----RLALHDNVTIFQQLVDKQADVMITDASEALFQ 227

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +    +         +      A  + + D  W   V    +   +  E  
Sbjct: 228 QQRYPQLCAVNPSSPMQYGE-KAYMLPRDDMSWKLYVDQWLHLAKSTGEYR 277


>gi|314934480|ref|ZP_07841839.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Staphylococcus caprae C87]
 gi|313652410|gb|EFS16173.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Staphylococcus caprae C87]
          Length = 263

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 68/216 (31%), Gaps = 15/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57
           M +  F  I  + +L     + ++S             L+ G  +    F          
Sbjct: 1   MKRLLFCIIALVFVLAACGNNDSSSDKDSKSSSKDDNTLRVGTESTYAPFTFHNKQDKLT 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+   +A++ A   +  K+++   +    F  L + + D+++        RE      
Sbjct: 61  GYDIGVIKAVAKA---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGINKDREKKYK-- 115

Query: 118 FRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F     +     ++   +K I S + + G  +  Q  T+    LA    A          
Sbjct: 116 FSNPYTYSSAVLVVRDNEKNIKSFNDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKV 169

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           +   +      + R DA   D  +    K       
Sbjct: 170 DGFNQSMDLLLSKRVDATFNDSLSYLDYKKQKPNAK 205


>gi|77465459|ref|YP_354962.1| ABC polar amino acid transporter, periplasmic binding protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389877|gb|ABA81061.1| ABC polar amino acid transporter, periplasmic binding protein
           [Rhodobacter sphaeroides 2.4.1]
          Length = 287

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F  ++ L  +  T+    + +  +I+     +  ++      A  K +G  +GF+
Sbjct: 1   MTNPRFGGLVALAFMAATTLPAQSQV-AEIRDS--YRVALDGTFAPHAMPKLSGGVEGFN 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +   +    S++            ALQ+   D L         R  S  L F  
Sbjct: 58  VDLAQLIGERLG---SEMTVDAAQFSGLIPALQAGTYDFLVAPVTVNQER--SENLLFTE 112

Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F++         +    G +I V  G+     L D+   +      + F   
Sbjct: 113 GFMDTNFAFVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEYGW--TVVPFGTN 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A    R DA     +   A       P    +  +I +      A    D    N
Sbjct: 171 TDAVEAVATGRADANLSGAT--VAAWAALQNP-AVDLSYEIQTGLVWGLAFRLDDAATRN 227

Query: 240 IVSWTH 245
            V    
Sbjct: 228 RVDLVL 233


>gi|312112962|ref|YP_004010558.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218091|gb|ADP69459.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 293

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 74/262 (28%), Gaps = 30/262 (11%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCG--------------INTGLVGFAEV 50
           FF  +  + +L             + +K   ++ G                     F   
Sbjct: 19  FFCVVFAVTVLAAEGNPEATDKADNAQKLRDIQVGPKPDWSWLPQLRVLTEADYPPFNYY 78

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G   GF++D  RA+   +  D                +L++ + D +  +       
Sbjct: 79  DEEGRLIGFNIDLARAICRELSID---CDISAAEWSTLVPSLKANEADAVIASMAING-- 133

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHN 168
           +    + F    Y     F+          SV  L G  + V  G+  E  L D+F    
Sbjct: 134 KTIADVDFTNRYYMTPARFVGRTGALFREVSVEALKGEKVAVVRGSAHEAFLRDFFD--- 190

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDIISK 223
                + F+   +   A +A   D   GD  +L       D                   
Sbjct: 191 -GAKIMSFDTAADARGALKAGDVDLLFGDGISLMFWIQGTDANRCCEFKGGGYTEARYFG 249

Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245
             +  A+ +G+T    ++ +  
Sbjct: 250 DGIGIAVKKGNTRLREVLDYAL 271


>gi|217977251|ref|YP_002361398.1| extracellular solute-binding protein family 3 [Methylocella
           silvestris BL2]
 gi|217502627|gb|ACK50036.1| extracellular solute-binding protein family 3 [Methylocella
           silvestris BL2]
          Length = 294

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 16/224 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L          +  + +N +  GF++D  R L + +     + +++  +       L 
Sbjct: 63  KELVIASEGARPPYNYLDSNNELAGFEIDLGRLLCARM---KLQCRFVTQDWDGLTPGLL 119

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQ 151
           ++Q D +    + T   E    +AF          FI   +  I   +   L G SI V+
Sbjct: 120 NRQYDAIMAAMEITD--EAKEKIAFSKPYIRMPSAFIASMQSDIKDTTPAGLKGRSIGVE 177

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +G   +  L D +K    +     +  +EE        R D   GD  A+     +    
Sbjct: 178 SGGAHQNYLDDLYK----QSEIRPYATLEEAILDLAEGRLDLVIGDKDAISDFLKSRKEG 233

Query: 212 SEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
               I+ D   ++          + + D     +        + 
Sbjct: 234 QCCKIVADAPHEAAYFGNGVGVGLRKEDVALKAMFDKAIDETMA 277


>gi|170739977|ref|YP_001768632.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168194251|gb|ACA16198.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 266

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 82/232 (35%), Gaps = 13/232 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  L  ++K   ++  +  G+  FA +  N    G DV+  + ++  +  D   IQ    
Sbjct: 27  ADSLDAVRKAKRIRIAVAIGIPRFAFIDQNLQPTGSDVETAKLIAQDLGADLDLIQI--- 83

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
               R   +Q+++ DIL  +   T  R+    + F                  +     +
Sbjct: 84  TNAARVPTIQTRKADILVASLAVTPERKKV--IDFTVPYATLNIVVAGVPALAVKGYPDI 141

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  I V   T  ++ +    K        + FE    +  A  + + D  +   + +  
Sbjct: 142 VGKRIGVTRATVNDMLVTQNAK----GAEIVRFEDDATLITAAVSGQVDLVSTQEAVVAV 197

Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           +     DRP E   +   ++   L  A+ QG+    + ++    + + +  L
Sbjct: 198 MNEKRADRPFETKFVQSELN---LGIALPQGEDRLKDWLNDWVRSNMASGRL 246


>gi|254250641|ref|ZP_04943960.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124879775|gb|EAY67131.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 275

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 16/266 (6%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K      + LI+   +  +   S+L  +K+ G L  G       F  +  NG   G
Sbjct: 1   MKRSKSCTSLFVALILAAASVAAHAESLLDRVKQHGELVVGTEMQFAPFDFL-ENGQQAG 59

Query: 59  FDVDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           F+    +AL +A+      K++++ L  +     L + + D+++     T  R      A
Sbjct: 60  FN----KALFAAVGQIIGVKVRFIDLPWESVLPGLDAGKFDMVAGPLTVTKAR--MERYA 113

Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +       + + + ++G  +    G+     L  Y            +
Sbjct: 114 FSLPIAEATDALLKRTGDGSLKTSADIAGKVVGAGKGSAQLEQLKSYAATLPKPPTIREY 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDT 235
               +  A     R  A     S      +   RP+   ++          A A+ +   
Sbjct: 174 VDNNQAYADLATGRIVAVA--NSLTNIAYVAKQRPAVFSVVQPAFGAKVYFAYALRKDAD 231

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNI 261
                      A + A     T   +
Sbjct: 232 SASLA--NAFNAALVALNKNGTLATL 255


>gi|295678130|ref|YP_003606654.1| Prephenate dehydratase [Burkholderia sp. CCGE1002]
 gi|295437973|gb|ADG17143.1| Prephenate dehydratase [Burkholderia sp. CCGE1002]
          Length = 263

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 11/237 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L DI   G ++         ++  K +G ++G D+D   +L+ ++      ++++  +
Sbjct: 32  SRLDDIVSHGTIRACTTGDYKPYSFYKGDGQFEGIDIDMAESLAKSLGVK---VEFVKTS 88

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQ 142
                    + + DI       TL R+         +                 +V    
Sbjct: 89  WSNLMNDFVA-KCDIGIGGVSPTLERQKHAFFTQAYMIDGKTPIVRCDDVSKYQTVAQID 147

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T E     YF   N      V+     I     A + D    D S   
Sbjct: 148 QPSTRVIVNPGGTNEKFAKQYFTHAN----VTVYPDNVTIFKQILAGKADVMVTDASETL 203

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L+   +     V           A  + +GD  +   V    +      E      
Sbjct: 204 -LQQKLNPGLCSVHPDKPFQYGEKAWLVPRGDVAFQQYVDQWLHLARATGEYQAISD 259


>gi|325523727|gb|EGD01987.1| putative ABC transporter substrate-binding protein [Burkholderia
           sp. TJI49]
          Length = 272

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 13/221 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           + K G L    +      +    +   +GF VD  + ++ ++ +   K+++  ++     
Sbjct: 36  VMKGGTLTYCSSMDAPPLSFYDESQQPQGFSVDIAQEVAKSLGN--LKVEWRVMSFSGLI 93

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGAS 147
            ALQ++Q D++         R   + +       +  Q  ++ +     + S+  LSG  
Sbjct: 94  PALQARQCDLVIGQLFDKPERRQVIDII---DYMYSSQSIMVPRGNPRHVKSLDDLSGLK 150

Query: 148 ICVQAGTTTELTLADYF----KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           + V  G+T    L         A     + +V+ +  +   A+R  + DAY     +   
Sbjct: 151 VAVINGSTIRALLEKENARLSAAGKPPMNIVVYGQDTDAFQAFRLQQVDAYGTTAESAAH 210

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            +                ++        + +     +    
Sbjct: 211 FRQVTGN--MFEEAVPSFNRIATGIGARKDEPLSKAVAKVV 249


>gi|311104488|ref|YP_003977341.1| extracellular solute-binding protein, family 3 family protein 3
           [Achromobacter xylosoxidans A8]
 gi|310759177|gb|ADP14626.1| bacterial extracellular solute-binding protein, family 3 family
           protein 3 [Achromobacter xylosoxidans A8]
          Length = 263

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 21/251 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V  L    LF  + +              L  G       F+ V  +G   GF+ D
Sbjct: 5   KTITVLTLAGASLFALAPAQAE----------KLVLGNEGSYPPFSMVDPSGRLTGFEPD 54

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R +   +  D    + + ++ K    AL  K++D +   T     R+  +      + 
Sbjct: 55  LAREMCKRMKAD---CEIVVMDFKALIPALLQKKLDAVVSQTKPLPERKEKVLFGRPVLF 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             D    +   K    +   L G  I +Q G+     + + F         + ++  ++I
Sbjct: 112 NPDSY-VVPEAKNYTFTPEGLKGVRIGLQRGSAQAKYVGETF---GNAVQIVFYDNPDQI 167

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPAIIQGDTEWY 238
                  R D   G   +     L+  +          +      +  +    +   E  
Sbjct: 168 RLDLANGRLDMSLGPKISWTNEFLSKPQGKGWKFAGGDLWTGGGEAGSSWIARKDSGELL 227

Query: 239 NIVSWTHYAMV 249
           N +S T  A++
Sbjct: 228 NRMSATVDAII 238


>gi|242239911|ref|YP_002988092.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242131968|gb|ACS86270.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 258

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 13/218 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    A G  +GFD++   A+  A      K  +   +      ALQ+
Sbjct: 24  ELRYGLEAEYPPFESKNAKGQLEGFDIELGNAICQA---GNFKCSWSETSFDALIPALQA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           K+ D ++   + T  R+    + F    Y      +     G+  +   L G +I V  G
Sbjct: 81  KKFDAINSAMNITDKRKE--AIDFTNPIYRIPTQLVGKAGSGLTPTAEGLKGKNIGVLQG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E+    +++          ++    +     A R D      +A  +  L       
Sbjct: 139 SIQEVYAKAHWEPKG--VTVTSYKDQNLVYDDLSAGRLDGTLVMAAAGQSGFLDKPEGKG 196

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHY 246
              L + +         +   + +GD      +     
Sbjct: 197 FAFLGNAVEDDKILGSGIGFGLRKGDETLKTELDNAIK 234


>gi|222102594|ref|YP_002539633.1| ABC transporter substrate binding protein (nopaline) [Agrobacterium
           vitis S4]
 gi|221739195|gb|ACM39928.1| ABC transporter substrate binding protein (nopaline) [Agrobacterium
           vitis S4]
          Length = 283

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 77/275 (28%), Gaps = 40/275 (14%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++      +    L   S +       +IK               +    ++G   G ++
Sbjct: 3   FRRMAALAVAFTTLISGSVTMAQDAPTEIK------IATEGAYAPWNFTTSDGKLDGLEI 56

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    L + +     K   +  +      +L   + D++  +   T  R     + F   
Sbjct: 57  ELANDLCARM---KVKCTIVAQDWDGLIPSLTVGKFDVIMASMFITPKR--LETIDFTQP 111

Query: 122 TYFDGQGFIMHKKKGISSVSQ-----------------------LSGASICVQAGTTTEL 158
              D  GF + K   +  +                         L G  + VQA TT   
Sbjct: 112 YAVDPSGFAVPKDSAVGKLGISTEKFKLEDEAPSKAAIDKLKSLLKGKVVGVQAATTNLD 171

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT---NDRPSEHV 215
            L  YF           ++  E+ D    A R DA     +AL A        D      
Sbjct: 172 FLRKYFA---DTVEIREYKTTEQHDLDLAAGRIDAIFAQQTALAATLAKPEFADYTIAGP 228

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                +        + + DT+   +++    + + 
Sbjct: 229 GFVGGVFGLGTGAGLRKQDTKLKEMLNTAISSAIA 263


>gi|167921045|ref|ZP_02508136.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           pseudomallei BCC215]
          Length = 264

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    ANG  +GFD+D   A+ +A        +++  +      ALQ 
Sbjct: 30  TLRFGLEAQYPPFESKAANGALQGFDIDVGNAVCNAA---KLTCKWVETSFDGLIPALQG 86

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153
           ++ D ++   + T  R     + F  + Y      I     G+  + + L G  + V  G
Sbjct: 87  RKFDAINSAMNATDQR--RQAIDFTTVIYRVLTQLIARADSGLEPTPASLKGKRVGVLQG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E     ++         + ++   +  A   A R D       A     L+      
Sbjct: 145 SIQEAYANAHWA--GAGVQVVAYQDQNQAYADLTAGRLDGTLVLAPAGQRGFLSRPEAKG 202

Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
              +   +         +A  + +GD      ++   
Sbjct: 203 FAFVGPPVRDDKILGSGIAFGLRKGDDALKARLNAAI 239


>gi|145641225|ref|ZP_01796805.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           R3021]
 gi|145274062|gb|EDK13928.1| arginine transporter ATP-binding subunit [Haemophilus influenzae
           22.4-21]
          Length = 239

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1   MKKTLLTAILLGASVAASAQ--------------ELTFAMQPTYPPFETTNAKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +  ++           L++K+ D      D T  R     + F  
Sbjct: 47  VDVTNAICQEI---QATCKFKSETFDALIPNLKAKRFDAAISAIDITDARAK--QVLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     ++  K K     +     +I VQ GTT +       K    +Y P  +  ++
Sbjct: 102 AYYDSSASYVALKGKATLESA----KNIGVQNGTTFQQYTVAETK----QYSPKSYASLQ 153

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                 ++ R D   GD + L  +       +     +       + L  A+ + + +  
Sbjct: 154 NAILDLKSGRIDIIFGDTAVLADIISKEPEIQFIGEKVTNKKYFGNGLGIAMHKSNKDLA 213

Query: 239 NIVSWTHYAMVTAEELG 255
             ++     +    E  
Sbjct: 214 AQLNKGLATIKANGEYQ 230


>gi|167842074|ref|ZP_02468758.1| extracellular solute-binding protein, family 3 [Burkholderia
           thailandensis MSMB43]
          Length = 279

 Score = 92.5 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 73/260 (28%), Gaps = 18/260 (6%)

Query: 1   MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
           M        L  +     +   S  A+       +  L   I      F           
Sbjct: 1   MKASILTRTLAAVAFGAVALHASFAAAQAAPAAAKHTLNVAIVPNYPPFEYKDPATDKLA 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVD   AL++ +    +K+ ++  +  +   A+ ++++D++         R     + 
Sbjct: 61  GFDVDLGEALAAKLG---AKLNWVETSFDQMMSAVATQRVDMILSGMTDLPTR--RDAVT 115

Query: 118 FRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMK 170
           F       G  F   K      + +  L G  +     T+     A +   +        
Sbjct: 116 FVD-YIETGPQFYTLKARAGEFAQMGALCGKRVGSSRRTSFPDNTAAWSAENCVKAGKPA 174

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              +  +   +     R +R DA       L            +  +            +
Sbjct: 175 IVVVGTDGSSDARMQLRQNRIDAAVQGGETLPYQNSLEQN--AYAPVGKPFLSQYTGIGV 232

Query: 231 IQGDTEWYNIVSWTHYAMVT 250
            + +T   + ++     M+ 
Sbjct: 233 AKTNTALSSALTTALNQMIA 252


>gi|220909006|ref|YP_002484317.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219865617|gb|ACL45956.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 306

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 14/230 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQ 79
             +++  + + G L  G    ++ +A +    +  GF VD  + +   +      P  IQ
Sbjct: 24  AETVIEKVARTGVLSVGTRLDMLPYAYINDQQELVGFSVDLTKLIRDEVQEELGRPVAIQ 83

Query: 80  YLPLNAKE-RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
               +++   F  LQ+ +IDI      +T  R       +       G   ++ K   ++
Sbjct: 84  VQVADSQNDFFPDLQTGKIDIACS-MQFTWERARF--ADYSIPYSISGIRLLVKKDSNLT 140

Query: 139 SVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                L G  + V  G+ +E       KA   +   +     E+      + + DA  GD
Sbjct: 141 GAPGSLGGKRVGVVPGSLSEAV----MKALQPQAVLVPLRGSEDGGNELGSGKIDAIAGD 196

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLA--PAIIQGDTEWYNIVSWTH 245
              L    L  +   +   L    S +       + + ++ +  +V+   
Sbjct: 197 TLILGGNALRVNPTGDSFKLIPQESYARYGIACIVPKNNSTFLYLVNRAI 246


>gi|163746021|ref|ZP_02153380.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Oceanibulbus indolifex HEL-45]
 gi|161380766|gb|EDQ05176.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Oceanibulbus indolifex HEL-45]
          Length = 245

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 65/255 (25%), Gaps = 25/255 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +    +         +            ++ G       +  +   G+  GF+
Sbjct: 1   MKKILLATAALSLTAGMAMAEAHGKT---------IRMGTEGAYPPYNFINDAGEVDGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L           +++  +       L S   D +      T  R   +   F  
Sbjct: 52  RELGDELCKRA---ELTCEWVKNDWDSIIPNLVSGNYDNIMAGMSITDERREVVA--FTQ 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y       +   +G      + G  +  Q  T     +A+           I F   E
Sbjct: 107 NYYPPTASAYVAASEGA----DIEGGVVSGQTATIQAAHVAE------SGATLIEFATPE 156

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA R    DA   D   L    +         +  D+     +  A+ Q D E  + 
Sbjct: 157 ETVAAVRNGEADAVFADKDYLVP-IVEESGGELMFVGDDVPLGDGIGMALRQSDGELRDT 215

Query: 241 VSWTHYAMVTAEELG 255
                  M     L 
Sbjct: 216 FDAVITEMKEDGSLN 230


>gi|254520604|ref|ZP_05132660.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226914353|gb|EEH99554.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 274

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 81/276 (29%), Gaps = 32/276 (11%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK--------- 57
           + ++IL       +A      K     + G+  G   F       +NG  K         
Sbjct: 14  VAILILTGCGSGKSA------KNENVFRVGMEAGYPPFNWTQMDDSNGAVKIEGSSEYAG 67

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DV+  + ++  +  +   +  +         AL S +ID +      T   +    + 
Sbjct: 68  GYDVEIAKKIAEGLGKE---LVIVKTEWDGLVPALTSGKIDAIIAGMSPTE--DRKETID 122

Query: 118 FRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           F    Y      ++    K     S++  +GA +  Q  T     +         +    
Sbjct: 123 FSNNYYQSQLVMVVKNNGKYTNAKSLADFNGAKVTAQLNTFHYSVIDQIEGVKKQE---- 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQ 232
             +    +  A  +   DAY  +     + +  N       +        +       I 
Sbjct: 179 AMDNFPAMRVALESGVIDAYVSEKPDATSAQAANSNFKMIELENGFVTNPEETQTAVGIN 238

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
            +++    ++     +   E++ I  + +       
Sbjct: 239 KNSDLTEKINEILSGISEEEQVNIMAEAVKNQPAAQ 274


>gi|294339405|emb|CAZ87761.1| putative ABC-type amino acid transport, periplasmic component
           [Thiomonas sp. 3As]
          Length = 288

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           K++G L    N        +  +G    G D+D   A++  +       +++        
Sbjct: 43  KQQGELTFAFNAAYAPMEFIANDGKTMIGLDIDLANAIAKKLGVKA---KFVQAGFDTII 99

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGAS 147
             LQS + D+   +   T  RE  +   F    +  G  F +  K    ++S+  L G S
Sbjct: 100 PGLQSDRYDLSMSSFTITKKREEVM--DFV-SYFTAGTSFYVKAKGGPAVASLGDLCGLS 156

Query: 148 ICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           + V  GT           +   A         +        A  + R        S + A
Sbjct: 157 VAVTKGTIQSEDATKQNQECKAAGKKGVDVQFYPDQNAASLAMDSGRAQ-VCMADSPVAA 215

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             +   R     +     + +P    I + ++     V     A++   E 
Sbjct: 216 WIVKESRGK-FKLSGVPYNSAPYGIVIPK-NSGLAEPVLQAVKAVMADGEY 264


>gi|148547663|ref|YP_001267765.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148511721|gb|ABQ78581.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 302

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 24/245 (9%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKI 78
           +AS L  ++       G    L  F+  + +    G+ ++ C  ++      +     ++
Sbjct: 25  SASTLERVRSSHSFTMGYLPDLAPFSTQEGD-KASGYAIEQCLKVADKLKRELGLPDLQV 83

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----- 133
           +Y P+   ++  A+   ++DIL   T  TL R  ++  A  PI        +        
Sbjct: 84  RYQPVTVYDQVSAVSQGKVDILCTPTPPTLERRKTISYA-IPIYTAGLSVVVRKDAPESL 142

Query: 134 -------------KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                            S  S L+  +     G  TE  + +  +   +    +     +
Sbjct: 143 LNVLNGKVANSGPTWRASINSGLANHTYATIEGGITEDWIRERMRLLGVIASLVTVANND 202

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E        + DA+  +   L         P   +++  I   SP+A  + + D ++  +
Sbjct: 203 EGIKLVADGKADAFFAERMLLKNQIAKEGAPKNLMLMDRIFEYSPVAMMVERNDEDFRLL 262

Query: 241 VSWTH 245
           V    
Sbjct: 263 VDTAL 267


>gi|315930410|gb|EFV09481.1| Glutamine-binding periplasmic protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 215

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 72/235 (30%), Gaps = 22/235 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  ++   IL  I  F  + S              L  G+  G   F      G   G  
Sbjct: 1   MKGNYEKIILIFISFFALNLSAKD-----------LVVGMELGYPPFEMSDKTGKASGIS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF  A +         +    +       AL++ +ID++  +   T  R+    + F  
Sbjct: 50  VDFLEAFAKKNGYK---LVVKNIAWDGLIPALKTAKIDLIMSSMTITDKRKKV--VDFSI 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    +      I+++  L   G  + ++ G+T  L      K         +F +
Sbjct: 105 PYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLK----NATINLFNK 160

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
                      + D +  D   +Y     +   +  ++ P   +      A+ +G
Sbjct: 161 ENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKG 215


>gi|325068921|ref|ZP_08127594.1| ABC transporter solute-binding protein [Actinomyces oris K20]
          Length = 306

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 11/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L    +T       +  +G   G+DVD   A+++ +         +     +  +A
Sbjct: 60  EDGVLDVAASTDYAPAEFLDPSGTAVGYDVDLTNAIAAVLGVKGK----VHTAEFDSIIA 115

Query: 92  LQSKQIDILSRNTDWTLLREISLGLA-FRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
               + D    +   T  R   + +  +  +           K    S   QL G +I V
Sbjct: 116 SIGSKYDAGISSFTVTPERTAEVDMTAYINVGSRFNVQAGNPKGVESSDHLQLCGRTIGV 175

Query: 151 QAGTTTELTLADYFKAHNMKYHPI----VFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           Q GT  E T+ D          P+     + +  E          DA T   S +    +
Sbjct: 176 QVGTAQETTMRDAADKCAQAGKPVLSVRSYSKQSEATTGLVGGTIDA-TYSDSTVAGYAV 234

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 + V L +I   +P      + D ++   +     
Sbjct: 235 ELTDG-QIVTLGEIEDAAPQGVVTAKADPQFTAAIQAAIQ 273


>gi|312171014|emb|CBX79273.1| cyclohexadienyl dehydratase, putative [Erwinia amylovora ATCC
           BAA-2158]
          Length = 274

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 72/245 (29%), Gaps = 6/245 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            + +L     ++  S L  + +   L          +  ++ +G ++G D+   ++L+  
Sbjct: 25  AVALLLLAGSASAQSHLDRVMQSKTLTVCTTGDYKPYTYLRPDGGYEGIDISLAQSLAKT 84

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   ++++    K        KQ DI       TL R+ +   A    +        
Sbjct: 85  LGAE---VKWVATTWKTLTADFTGKQCDIALGGVSVTLKRQQTAWFASPLDSDGKIPLVR 141

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              K    ++ QL+  ++ +            +  A   +    +F     I       +
Sbjct: 142 CADKNKYRTIKQLNKPAVRLIEPAGGTN--EAFAHAFLPQAKLTLFHDNVTIFQQLVDKK 199

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D    D S     +    +         +      A  + + D  W   V    +    
Sbjct: 200 ADVMITDASEALYQQKRYPQLCAINAEKPLQYGE-KAWMLPRDDISWKMYVDQWLHLGQA 258

Query: 251 AEELG 255
             E  
Sbjct: 259 NGEYQ 263


>gi|118469698|ref|YP_891108.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170985|gb|ABK71881.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 590

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 80/218 (36%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       + + G + GFD +  RA++  +     ++ ++            
Sbjct: 81  GVLTVGTLSDAPPSICIDSAGQFTGFDNELLRAVADKLG---LRVDFVGTEFSGLLAQTA 137

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           S++ D+ S +   T  R  ++G  F     F     ++     I+   QL  G  I V  
Sbjct: 138 SRRFDVASSSITTTDARRRTVG--FTNGYDFGYFSLVVPTGSPITGFDQLGPGQRIGVVQ 195

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ +     + A+ +  + DA+    S   +  +    P+
Sbjct: 196 GTVQESYVIDTL-----HLEPVKYPDYNTVYASLKTRQIDAWVAP-SQQASGTVQPGDPA 249

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + +        + +A A+ + +    + ++    A++ 
Sbjct: 250 QIIE-NTFSLDNFVAWAVAKENQPLIDALNSGLDAIIA 286


>gi|317177727|dbj|BAJ55516.1| ABC-type polar amino acid transport, periplasmic component
           [Helicobacter pylori F16]
          Length = 240

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 66/228 (28%), Gaps = 11/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            +S+   +  +  +  G       F      G   G+DV+  R L+  +      I++  
Sbjct: 3   ASSLYERLANKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVK---IKFHE 59

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141
            +       L+S + D+++     T  ++            + G   ++ K    I  + 
Sbjct: 60  TSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSLPYSYSGTIMLVRKDENRIKDIK 118

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G        +T          A       +  + + +        R D       A+
Sbjct: 119 DIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSMAQALLLVAQKRADLTLNSSLAI 172

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                T+      +          ++  I +   +   +++     ++
Sbjct: 173 LNYLNTHKNNPFKIAWESKEKDGGVSFVINKHQEKALELINQAMQRLI 220


>gi|163740072|ref|ZP_02147476.1| extracellular solute-binding protein, family 3 [Phaeobacter
           gallaeciensis BS107]
 gi|161386703|gb|EDQ11068.1| extracellular solute-binding protein, family 3 [Phaeobacter
           gallaeciensis BS107]
          Length = 258

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 17/255 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  +      L     +  +           L+ G++ G   F  V+ +   +GF+
Sbjct: 1   MMKPFAWAAAVAASLTAAPSAFASDT---------LRVGMSGGYFPFTFVRQD-VLQGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++        +++++ ++      AL+S +ID ++     T  R          
Sbjct: 51  VDVMNAVAEETG---LEVEFVTMSFSGLIGALESDRIDTIANQITITPERSAKFAFTQAY 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +            +  I+  + L+G ++ V  G+  E  L +  +A   K     +E   
Sbjct: 108 VIDGAQVVVKRGNEDSIAGPADLAGKTVAVNLGSNFEQLLRELPQA--DKIEIKTYEANI 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
             D A    R DA+  D  +   L   +  P      P    ++ L            + 
Sbjct: 166 AQDTAL--GRVDAFVMDRVSSAQLIQESPLPLALAGAPFSEIRNALPFRQGADSLALRDR 223

Query: 241 VSWTHYAMVTAEELG 255
           V      +    +L 
Sbjct: 224 VDTALTTLREGGKLA 238


>gi|238025757|ref|YP_002909988.1| Prephenate dehydratase [Burkholderia glumae BGR1]
 gi|237874951|gb|ACR27284.1| Prephenate dehydratase [Burkholderia glumae BGR1]
          Length = 263

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 68/242 (28%), Gaps = 11/242 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +  T AS L  +  RG L+         ++  + +G ++G D+D   +L+ ++    
Sbjct: 23  SAATPPTPASRLDAVLARGTLRVCTTGDYRPYSYYRPDGRFEGIDIDLAESLARSLGVRA 82

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++       + F+A    + D+       TL R+  +      +              
Sbjct: 83  EFVKTSWRTLTDDFVA----KCDVAVGGISTTLDRQKRVFFTRATMQDGKTPIVRCADVD 138

Query: 136 GISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              ++         + V  G T E     +           V+     I       R D 
Sbjct: 139 RYRTIAQIDQPSTRVIVNPGGTNERFARQFLP----HATLTVYPDNVTIFRQILDGRADV 194

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              D S     +   +     V           A  + +GD  +   V    +      E
Sbjct: 195 MVTDASETR-WQQKLNPGLCSVHPDQPFQFGEKAYMLPRGDVVFQQYVDQWLHLARETGE 253

Query: 254 LG 255
             
Sbjct: 254 FQ 255


>gi|171741045|ref|ZP_02916852.1| hypothetical protein BIFDEN_00111 [Bifidobacterium dentium ATCC
           27678]
 gi|171276659|gb|EDT44320.1| hypothetical protein BIFDEN_00111 [Bifidobacterium dentium ATCC
           27678]
          Length = 331

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       +  +G    GFDVD  +AL++    +         N  
Sbjct: 83  DSVTKDGKLSIGMDTSYAPAEFLAEDGKTPVGFDVDIAKALANIFGLEADP---ETSNFD 139

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F  +        +          S L G 
Sbjct: 140 SIIPSVGS-KYDIGISSFTITKER--MEAVDFVSMFKAGSTWVVKKDNPNKVDTSSLCGL 196

Query: 147 SICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            I VQ GTT E  + +               +  +   ++       + D +  D     
Sbjct: 197 KIAVQTGTTQEEEVNEAQEQCKADGKQDIQILSNKLQTDVTTNVATGKADVFYADSPVAG 256

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   E +     ++K   A AI +GD++    V     
Sbjct: 257 YAIAQTEDTLEALGEDVGVTKE--AVAIKKGDSDTAKAVQAALQ 298


>gi|86158184|ref|YP_464969.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774695|gb|ABC81532.1| amino acid-binding domain sensor histidine kinase [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 596

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 73/225 (32%), Gaps = 12/225 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            R  +  G +     +  +   G   GF+V+  RA++  +     ++++      +   A
Sbjct: 49  ARERVIVGGDQSYPPYEFLDQQGRPAGFNVELTRAVARTVG---LEVEFRLGRWADMRRA 105

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150
           L++ +ID L      +   E +  + F P +          K    + S++ L+G  + V
Sbjct: 106 LEAGEIDALQG---MSYSEERAKEVDFTPPSLIVHHAIFARKGDRPVRSLADLAGKEVLV 162

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                 +  + D  +  + +   +  +   ++     A R D           L      
Sbjct: 163 LR----DGIMHDTLRREHPEVKVVPADTHADVLRQLAAGRHDYAVMAKLPGLYLVRELG- 217

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            S    +    +      A+ +G+      ++     +    E  
Sbjct: 218 LSNLTAMDQPAAVERYGFAVRRGNEALAGRLAEGLAIVRNTGEYQ 262


>gi|312882236|ref|ZP_07741982.1| ABC amino acid transporter periplasmic component [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370080|gb|EFP97586.1| ABC amino acid transporter periplasmic component [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 248

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 22/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V  + L +    + +T             +K G++     F  V+ +   +GF+
Sbjct: 1   MKNWMKVLTVALSLAASLAHATTD-----------VKVGMSGRYFPFTFVEQD-KLQGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +  +++Y+  N    F  L++ +ID +S     T  R+      F  
Sbjct: 49  VDLWDEIAKR---NDYRVEYVTANFSGLFGLLETGRIDTISNQITITEARQA--KYLFAD 103

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG    + K    I  V+ L+G S+ V  G+  E  L  Y K   +  +   ++  
Sbjct: 104 PYVIDGAQITVRKGNKDIKGVADLAGKSVAVNLGSNFEQLLRSYDKEGKI--NIKTYDTG 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DA+  D  +  AL      P E    P    ++       +   +  N
Sbjct: 162 IE--HDVALGRSDAFIMDRLSALALIKKTGLPLELAGQPFETIENAWPFVDNEQGQKLRN 219

Query: 240 IVSWTHYAM 248
            V+    AM
Sbjct: 220 EVNQALKAM 228


>gi|317052936|ref|YP_004119290.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316953263|gb|ADU72734.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 274

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 15/237 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K     +  L+           S    IK+ G L+ G+  G   + +  + G+W G   
Sbjct: 3   FKLHHFVLPLLMAAAPLFSHAEESTWDHIKQTGELRIGVAQGEPWYFKDPSTGEWNGIGY 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + L+  +      ++           A+Q+ QID +    D T  R       F   
Sbjct: 63  NVGKVLAKDLGVKLVPVE---TTWGNAVAAIQAGQIDTML-VLDPTDERRK--AADFSDQ 116

Query: 122 TY-FDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            + +  QG ++      ++   L      I V  G++ +L L             + F  
Sbjct: 117 PFLWYAQGVLIRDGIPATNWEDLNRPDIKIGVTLGSSPDLILTKKLPKA----QLVRFTN 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++E  AA+ A R DA +    AL   +    + +  +ILP  I       A+ +   
Sbjct: 173 MDEGVAAFYAGRVDALSYVHPALALQQAKVHKGN--LILPKPIIAISTGGALRKESD 227


>gi|84516445|ref|ZP_01003804.1| ABC basic amino acid transporter, solute-binding protein
           [Loktanella vestfoldensis SKA53]
 gi|84509481|gb|EAQ05939.1| ABC basic amino acid transporter, solute-binding protein
           [Loktanella vestfoldensis SKA53]
          Length = 240

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 54/199 (27%), Gaps = 26/199 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V+ +   +L   + + +            ++ G       +  +   G+  GF+
Sbjct: 1   MMNKLIVTSVAAALLGSAAMAQD-----------VVRLGTEGAYPPYNFINDAGEVDGFE 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L +          ++  +       L S   D +      T  R+    + F  
Sbjct: 50  RELGDELCARA---ELTCTWVTNDWDSIIPNLVSGNYDAIIAGMSITEERKEV--IDFSD 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                                  + A I  Q+GT     +     A       + F   +
Sbjct: 105 PYTQP-----DPSAFLAMGDVDFANAVIAAQSGTIQASYVTGMAGA-----TLLEFATPD 154

Query: 181 EIDAAYRAHRCDAYTGDIS 199
           E  +A R    DA   D +
Sbjct: 155 ETISAVRNGEADAVLADKA 173


>gi|225350856|ref|ZP_03741879.1| hypothetical protein BIFPSEUDO_02430 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158312|gb|EEG71554.1| hypothetical protein BIFPSEUDO_02430 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 312

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 12/222 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +K  G L  G+            +G    G+D+D  +A++  +   P+ +        
Sbjct: 67  DLVKD-GELSAGMELSYAPAEFYAEDGKTPVGYDIDMTKAIAKTLGLKPNIVS---SMFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + D+       T  R     + F           +          S + GA
Sbjct: 123 TIIPSIGS-KYDLGITAMTITEER--LQSVDFVSYYRAGSTWAVKKGNPKKLDTSGMCGA 179

Query: 147 SICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            I VQ GT  E       K    + K   + ++R  E   A    + DA+  D     A 
Sbjct: 180 KIAVQTGTVQEEEANTIAKGCEADNKAEVMSYKRQAEAATAVATGKADAFYADSP--VAG 237

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +    +   L D+   +    A+ +G+T+    V     
Sbjct: 238 YAISQTDGQLEALGDVEGVAKQGIAVKKGNTQLAEAVQKAVQ 279


>gi|317487128|ref|ZP_07945931.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316921612|gb|EFV42895.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 269

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 15/236 (6%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    V +  +        +  A      K+   L+  +N     FA +  NG   GF
Sbjct: 1   MNRLHVLVLLAAMACTGLVMGTVKAEAADSGKE---LRAAVNATAPPFAFM-ENGKLVGF 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD    ++  +     ++    +        LQ+K+ D  + NT     R + +   F 
Sbjct: 57  EVDLHAEVAKRMGK---QLVMTNIPFAGLAPGLQAKKWDA-AGNTWINKERLVMM--DFS 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F+  K   I+S  QL G ++  +AG T E    D  +     Y    ++R 
Sbjct: 111 DPWVDAQLAFVTRKNDAITSPEQLKGKTVGAEAG-TAEQRWLDANQEKYGPYTIRTYDRS 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +I       R DAY  + +                 + D+        A  +GD 
Sbjct: 170 IDILMDLMNKRLDAYLREQTRALYQIKNYPMLGVAFPVGDVFV---QGVAFRKGDP 222


>gi|315178665|gb|ADT85579.1| hypothetical cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio furnissii NCTC 11218]
          Length = 258

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 12/223 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             S L  +   G L+ G        +        ++GFD+D    L++ +      ++Y+
Sbjct: 21  AQSRLQTVLNTGVLRVGTTGDWNPMSIKDPATNRYRGFDIDVTTELANDLG---VTVEYV 77

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
             + K     + + + D ++ +    + R    G +               +        
Sbjct: 78  ATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQPYFYLAFVPVVQKSELSRYQDWQ 136

Query: 142 --QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
              L    +    GT  E  + ++F               +E      A R D       
Sbjct: 137 DFDLPNVKVAATLGTVQEKMVKEFFPNAQHIVIEAPARDYQE----LLAKRADVSVTSNV 192

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               L     +    V +      +P+A  + Q D  W N ++
Sbjct: 193 EAATLVDKFSQ-LAIVPVKAARRPTPIAMLLPQDDQVWINYIN 234


>gi|157964217|ref|YP_001499041.1| amino acid ABC transporter substrate-binding protein [Rickettsia
           massiliae MTU5]
 gi|157843993|gb|ABV84494.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           massiliae MTU5]
          Length = 243

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 60/210 (28%), Gaps = 17/210 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+  F    L   +L               +    L  G       +  ++ +G+  G D
Sbjct: 1   MFMKFLKIFLLSCLLVSC---------EKKETEKTLIVGTAADNPPYEFIQ-DGEIVGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      +     +      AL S+ ID+       T  R     ++F  
Sbjct: 51  IDIIKAISERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSVTPERAEY--ISFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I +   L    + VQ G+  E    D   +  +           
Sbjct: 106 NYATARFAIIYRTGDNIQNSKDLENKIVGVQLGSVLEKKAHDL--SQTINIKVHSLANHL 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 164 MLVEELKARVIDAIISEEFQGKKLKANNSN 193


>gi|307725563|ref|YP_003908776.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307586088|gb|ADN59485.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 270

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 11/213 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  G++     ++ +  NG   GFDV+  RA+++ +        +   +      ++ 
Sbjct: 36  GKIVAGVDANNKPYSYID-NGKMTGFDVELVRAIAAKLG---LTADFRAQDFAGLLPSVA 91

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
           +KQ+D+ + +   T  R     + F                  I +    + G  I V  
Sbjct: 92  NKQVDLAAGSISITKERLKM--VDFSEGYLTGLLSVGTLPDSPIGAEVASVKGKRIGVVQ 149

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  +     Y          + F  +     A R    D Y  D + L  L+       
Sbjct: 150 GTIEDTYSQSYLP----GAQIVRFPNINAGFLALRNKYIDGYFIDKTLLEGLQGKYPDLK 205

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               L    S  P    I +G+ +    ++   
Sbjct: 206 LADRLDISASNLPAGFPIRKGNVKLEAAINKAI 238


>gi|153855978|ref|ZP_01996919.1| hypothetical protein DORLON_02944 [Dorea longicatena DSM 13814]
 gi|149751778|gb|EDM61709.1| hypothetical protein DORLON_02944 [Dorea longicatena DSM 13814]
          Length = 289

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 77/250 (30%), Gaps = 23/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGF-LKCGINTGLV 45
           M K    ++L  ++   T                +++ S   D K  G  +    +    
Sbjct: 9   MKKRVLAALLVTMMTVGTVAGCGSNAKSDDSDKKASSESKSDDKKDSGKKVTVVTSGTGE 68

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            ++ +  +G W G D +    +      +   ++    +    +  L + + D+++    
Sbjct: 69  PYSLISDDGKWTGIDAEMWDEIEKRTGWE---VEVKQASFDAMWGELDTGRADVVANCLA 125

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
               R  +         Y D Q  I++      +   L G ++    G   +  + D  K
Sbjct: 126 VKEER--TDKYNATIPYYGDSQCIIVNDDSDYKTSDDLKGKTVGCTNGQAAQTIIEDMAK 183

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                    ++E         +  R DAY    + + A    N          + +  + 
Sbjct: 184 EKGF--TVKLYEDSAVGMNDLKLGRIDAYANTTTNVNAFTHNNTDAK-FRFFDEQLLANN 240

Query: 226 LAPAIIQGDT 235
           +A  + + D 
Sbjct: 241 VAYFLQKTDD 250


>gi|296135303|ref|YP_003642545.1| extracellular solute-binding protein family 3 [Thiomonas intermedia
           K12]
 gi|295795425|gb|ADG30215.1| extracellular solute-binding protein family 3 [Thiomonas intermedia
           K12]
          Length = 288

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           K++G L    N        +  +G    G D+D   A++  +       +++        
Sbjct: 43  KQQGELTFAFNAAYAPMEFIANDGKTMIGLDIDLANAIAKKLGVKA---KFVQAGFDTII 99

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGAS 147
             LQS + D+   +   T  RE  +   F    +  G  F +  K    ++S+  L G S
Sbjct: 100 PGLQSDRYDLSMSSFTITKKREEVM--DFV-SYFTAGTSFYVKAKGGPAVASLGDLCGLS 156

Query: 148 ICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           + V  GT           +   A         +        A  + R        S + A
Sbjct: 157 VAVTKGTIQSEDATKQNQECKAAGKKGVDVQFYPDQNAASLAMDSGRAQ-VCMADSPVAA 215

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             +   R     +     + +P    I + ++     V     A++   E 
Sbjct: 216 WIVKESRGK-FKLSGVPYNSAPYGIVIPK-NSGLAEPVLQAVKAVMADGEY 264


>gi|317062162|ref|ZP_07926647.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313687838|gb|EFS24673.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 240

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 12/214 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L  G N     +  ++ +    GFD+DF  A+   I  +   + ++ +       A
Sbjct: 9   AAKKLYVGTNAEFKPYEYLEGD-KITGFDIDFMDAIGKEIGYE---VHWVNMGFDGLLPA 64

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ K++D +      T  R+ ++  +   +        I+++   I    +L    + VQ
Sbjct: 65  LQMKKVDAVIAGMSQTPERQKAVDFSMPYMFTKSEHYVIVNENSPIVKKEELKDKKVGVQ 124

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT  E           +   P ++          +  +  A      +  A        
Sbjct: 125 IGTIQEEFTIA------LDGIPQIYNAWTGALMDLQQDKISAVIIADVSGNAYLENMKGL 178

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +  I+ D    + +A    +G+T+    V+   
Sbjct: 179 KKVDIVIDSQPGASIA--FRKGETDLVKAVNEAI 210


>gi|292486946|ref|YP_003529816.1| cyclohexadienyl dehydratase, putative [Erwinia amylovora CFBP1430]
 gi|291552363|emb|CBA19408.1| cyclohexadienyl dehydratase, putative [Erwinia amylovora CFBP1430]
          Length = 274

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 72/245 (29%), Gaps = 6/245 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            + +L     ++  S L  + +   L          +  ++ +G ++G D+   ++L+  
Sbjct: 25  AVALLLLAGSASAQSHLDRVMQSKTLTVCTTGDYKPYTYLRPDGGYEGIDISLAQSLAKT 84

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   ++++    K        KQ DI       TL R+ +   A    +        
Sbjct: 85  LGAE---VKWVATTWKTLTADFTGKQCDIALGGVSVTLKRQQTAWFASPLDSDGKIPLVR 141

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              K    ++ QL+  ++ +            +  A   +    +F     I       +
Sbjct: 142 CADKNKYRTIKQLNKPAVRLIEPAGGTN--EAFAHAFLPQAKLTLFHDNVTIFQQLVDKK 199

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D    D S     +    +         +      A  + + D  W   V    +    
Sbjct: 200 ADVMITDASEALYQQKRYPQLCAINAEKPLQYGE-KAWMLPRDDISWKMYVDQWLHLGQA 258

Query: 251 AEELG 255
             E  
Sbjct: 259 NGEYQ 263


>gi|227514872|ref|ZP_03944921.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus fermentum ATCC 14931]
 gi|227086719|gb|EEI22031.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus fermentum ATCC 14931]
          Length = 287

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 74/251 (29%), Gaps = 18/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
            K   +S++ L+ +  T+   +      +  +       +  L   +          G+D
Sbjct: 6   KKLIGLSLVALVGVGLTACGKSQD--QKVADQKTWTVATSGTLYPTSYHDPKTKKLTGYD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA++  +      + +   N   +  A+++ +  +   +   +  R+    ++   
Sbjct: 64  IEVIRAVAKGLHKK---VVFKEYNVDGQLTAVKTGKAQMAVNDFAISPERKNQFLMSSPI 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              F+        + GI S + + G         T    LA    A  + Y  +     +
Sbjct: 121 KHSFNSLLVRKDDQSGIHSWADIKGKK-AAGEAGTNYQRLAQQLGAKLVNYDNV---SND 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAIIQGD 234
                 ++ + D    D         T         P  + +  +          I + D
Sbjct: 177 VYLKGVQSGKTDLIMNDYYLQKLALATYPNSGLEIDPDMYFVTNEDGKGE--GIVINKKD 234

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 235 KALQKEVNEEL 245


>gi|89056450|ref|YP_511901.1| extracellular solute-binding protein [Jannaschia sp. CCS1]
 gi|88865999|gb|ABD56876.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Jannaschia sp. CCS1]
          Length = 276

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 78/236 (33%), Gaps = 16/236 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                  + S+L  I++ G ++ G++     ++    NG+  GF++D  RAL+  +  + 
Sbjct: 27  SAAQSLASESVLTTIQEEGVIRIGLSI-FTPWSMRDVNGELIGFELDVGRALAEDMGVE- 84

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++++P        AL +   D++      T  R  +L + F     + G   + +   
Sbjct: 85  --VEFVPTAWDGIIPALLAGNFDVIISGMSITPQR--NLTVNFTDPYAYSGMAILANTAM 140

Query: 136 GISSVSQ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                         +   + G T    + + F         ++F+               
Sbjct: 141 TEGMTMDDYNSPDITFAARRGATPATVIQNRFPEA----ELLLFDEDGASTQEVLNGNAH 196

Query: 193 AYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           A           +     P        ++I  +  A A+ +GD +  N  +    A
Sbjct: 197 ATMASQPTP--DREVRLNPETLSVPFDELIDPTGEAFAVRKGDPDAMNFFNNWIAA 250


>gi|19745968|ref|NP_607104.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           MGAS8232]
 gi|19748128|gb|AAL97603.1| putative ABC transporter (binding protein) [Streptococcus pyogenes
           MGAS8232]
          Length = 287

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 75/243 (30%), Gaps = 8/243 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  S    IK++G LK          +    N +  G++VD  + +   +     K++++
Sbjct: 25  SQKSSWNTIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVKEIGKRL---NIKVKFV 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                + F ++ S ++DI   N D T  R+    ++        G   +        +  
Sbjct: 82  ETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGM-IVRADGSSNMAKK 140

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            LS       AG +    +    +    +         +         R D    D  A 
Sbjct: 141 DLSDWKGKKAAGASGTEYMK-VAQKQGAEMVTYDNVTGDVYLNDVANGRTDFIPNDYPAQ 199

Query: 202 --YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
             +   + +  P+ +V + D+    +     + + D      +      M     L    
Sbjct: 200 KLFVDYMLSQNPNLNVKMSDVQYNPTEQGIVMNKKDDSLKKKIDAVIKDMKKDGSLKKIS 259

Query: 259 KNI 261
           +  
Sbjct: 260 ETY 262


>gi|291456924|ref|ZP_06596314.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium breve DSM 20213]
 gi|291382201|gb|EFE89719.1| glutamate-binding protein of ABC transporter system
           [Bifidobacterium breve DSM 20213]
          Length = 293

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 7/270 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             + L   ++         + +    +   L  G+            +G ++GFD+   +
Sbjct: 19  IAAALGFALMLSGCGQIQVTTVNGSPEGPTLAIGVAADEPAIGAW-HDGTYEGFDISVAK 77

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +++ +     +I +  +    R   L + Q+D++  +   T          F       
Sbjct: 78  YVAAKLGYANKQIVFKQVRPANRASMLNNGQVDMVVASWAITDG--SKAEADFAGPYLRT 135

Query: 126 GQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           G G ++               G               AD F+A++ K      +   +  
Sbjct: 136 GVGLLIRTDDRADFAQAGDGIGDITDRMVCIVKGDDTADLFRANHPKAQFQERDSYAQCV 195

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A +    DA   D++ L  L+   + P    +L D  S      A+ QG  +    +S 
Sbjct: 196 TAVQVGSADAIASDMAVLSGLR-QANGPQYMTVLQDEGSVE-YGIAVSQGTPQLAQKISE 253

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDV 273
               M+        +  + + ++ T   +V
Sbjct: 254 ALKDMIADGSWESARAELKRQTRLTVTREV 283


>gi|222109053|ref|YP_002551319.1| nopaline binding protein of ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221727975|gb|ACM31025.1| nopaline binding protein of ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 283

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 63/242 (26%), Gaps = 38/242 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F ++  L  +               K    +          +    A G   GFD
Sbjct: 1   MK---FFNLNALAAVVTGVLVAAGPS--QAKDYKSITIATEGSYAPYNFKDAGGKLIGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L   +     + +++         +L + + D +         RE    ++F  
Sbjct: 56  IDLGNDLCKRM---NIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKV--ISFSR 110

Query: 121 ITYFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTT 156
                   F+      +                               G    VQAGT+ 
Sbjct: 111 PYLLTPMTFLTTADSPLLKTPVALENLPLDNITPEQKTELDKFTKVFEGMKFGVQAGTSH 170

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E  +     +         ++ ++ +    +A R DA    +S L  L    D     + 
Sbjct: 171 EAFMKQMMPS----VQISTYDTIDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMF 226

Query: 217 LP 218
            P
Sbjct: 227 GP 228


>gi|317406066|gb|EFV86330.1| extracellular solute-binding protein family 3 [Achromobacter
           xylosoxidans C54]
          Length = 279

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 78/225 (34%), Gaps = 11/225 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  IK+RG +  G+      F  +        G++ D  R L+  +      +Q   + 
Sbjct: 31  TLDKIKERGTVTIGVLANGGVFGSIDPATQQLVGWNPDLARELAKGLGVKAELVQ---VQ 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   L S ++D+L  + +    R   LG A  P  +  G      K  GI+    L 
Sbjct: 88  TATRTQFLISGKVDLLIASMELNPERAEILGYAPTPF-FRVGGAAATRKDSGIAKWEDLR 146

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA- 203
           G  +CV  G++    L   + A         ++   +   A R  +C A   D + ++  
Sbjct: 147 GKPVCVSQGSSFARPLQADYGA-----VVKGYKSSSDSLLALRGGQCVAAVHDSTLIHPL 201

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           L+   +    H  +   +  +       +G+ +    V       
Sbjct: 202 LRTNPEWADYHAPIATEVLPANSVVWTRKGEADTIAAVDKVIQGW 246


>gi|295100979|emb|CBK98524.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Faecalibacterium
           prausnitzii L2-6]
          Length = 300

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 79/242 (32%), Gaps = 30/242 (12%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             I  RG LK G+   + GF+      G++KG +      ++  +  D   +++  + A 
Sbjct: 56  QAIVDRGVLKVGVKNAVKGFSFQDTLTGEYKGLEDSLAEMIAEHLGVD---VEFTTVTAA 112

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   L S  ID +      T  R+ +    F    Y D    ++    GI  ++ L   
Sbjct: 113 TRGELLDSSDIDAVLATFTITEERKKT--WDFSTPYYTDYVSVLVEDSTGIKGLADLKDK 170

Query: 147 SICVQAGTTTELTL----------------ADYFKAHNMKYHP--IVFERVEEIDAAYRA 188
            + V +G+T+   L                AD F A   K       ++    I  A  A
Sbjct: 171 VVGVSSGSTSARALVKAMIDEGVLDGASFDADTFNADTWKDGVSFRQYDDYPAISTALSA 230

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                +  D S L   K       +    P          A  +G +++  +        
Sbjct: 231 GEVQGFCVDKSILAIYKTEGRSYIDAEFSPQE-----YGVATKKG-SDFSTLCDDLVKGW 284

Query: 249 VT 250
           + 
Sbjct: 285 LA 286


>gi|237734553|ref|ZP_04565034.1| arginine-binding extracellular protein artP [Mollicutes bacterium
           D7]
 gi|229382373|gb|EEO32464.1| arginine-binding extracellular protein artP [Coprobacillus sp. D7]
          Length = 247

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 78/257 (30%), Gaps = 20/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V ++C +     +   N+           +  GI+     +  ++   D  GFD
Sbjct: 1   MKKLLKVLLVCTMAFTLAACGGNSGS----DGTKEILIGISPDYPPYESLEGK-DMVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQ--YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D  + L   + D+    +  +  ++      +L S QID+                + +
Sbjct: 56  IDMTKELFKIMNDNGGNYEYKFKQMSFDTISTSLISDQIDLGISGFTM----HKDWDVLW 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   Q  ++     I++ + L G +I  Q   T E    D   A       +    
Sbjct: 112 SDKYNDSRQVALVANDSTITTKTDLEGKNIGAQLAATGESVANDIKDAKVKAVKDVKVL- 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                    +   DA   D +              + +L + + +        +G  +  
Sbjct: 171 ----IETLNSGGIDAIILDEAVAKNYVEQ----GGYKMLDETLLEEENLIIANKGSEDLI 222

Query: 239 NIVSWTHYAMVTAEELG 255
             ++      + +++  
Sbjct: 223 KDINKALAEFIKSDKYQ 239


>gi|145295473|ref|YP_001138294.1| hypothetical protein cgR_1406 [Corynebacterium glutamicum R]
 gi|140845393|dbj|BAF54392.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 334

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 65/218 (29%), Gaps = 12/218 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +   + +RG L  G N     F    ++G   G ++D  RA++  +  + S      
Sbjct: 81  QAMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMDLVRAMAGVMGLEFSP---QE 137

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +      ++Q+  +DI +        R       F    Y   Q      ++       
Sbjct: 138 QDFSLILPSVQAGTLDIGASGFTDNEER--RENFDFIDFLYAGVQWAQATDRETPIDPEN 195

Query: 143 LSGASICVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G ++ VQ  T  E        A            + +E  +    A    R DA   D
Sbjct: 196 ACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTAATALILGRADALAAD 255

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                     ++      ++ D+   +P   A      
Sbjct: 256 SPVSAWAAERSE--GRIEVVGDMYLAAPFGFAFPLESD 291


>gi|306835975|ref|ZP_07468967.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium accolens ATCC 49726]
 gi|304568141|gb|EFM43714.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Corynebacterium accolens ATCC 49726]
          Length = 295

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 9/225 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L  G N     F    ++GD +G ++D  RA++  +      ++    +      A
Sbjct: 54  DDGVLTAGTNPPYAPFQLKDSHGDLQGVELDLARAVAGVLGLKFQALE---QDFSMILPA 110

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +QS QID+ +     T   +      F    Y   Q   +             G ++ VQ
Sbjct: 111 VQSGQIDMGASGFTDTA--DRRDEFDFVDHLYAGIQWAELVDGPNKVDPQNPCGLTVAVQ 168

Query: 152 AGTTTEL-TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             T +E   +    +A +     + ++  +    A    R DA + D          ++ 
Sbjct: 169 RTTVSETDDVRPKQEACDGDLTVLSYDTGDNAALAVLMGRADALSADSPVTAWAVNRSEG 228

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                 + D+   SP   A+ + D++     +     ++   E  
Sbjct: 229 KM--RAVGDMFQASPYGFAVPK-DSDLGKASAAALQHLIDTGEYA 270


>gi|309802667|ref|ZP_07696771.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
 gi|308220731|gb|EFO77039.1| ABC transporter, substrate-binding protein, family 3
           [Bifidobacterium dentium JCVIHMP022]
          Length = 313

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       +  +G    GFDVD  +AL++    +         N  
Sbjct: 65  DSVTKDGKLSIGMDTSYAPAEFLAEDGKTPVGFDVDIAKALANIFGLEADP---ETSNFD 121

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F  +        +          S L G 
Sbjct: 122 SIIPSVGS-KYDIGISSFTITKER--MEAVDFVSMFKAGSTWVVKKGNPNKVDTSSLCGL 178

Query: 147 SICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            I VQ GTT E  + +               +  +   ++       + D +  D     
Sbjct: 179 KIAVQTGTTQEEEVNEAQEQCKADGKQDIQILSNKLQTDVTTNVATGKADVFYADSPVAG 238

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   E +     ++K   A AI +GD++    V     
Sbjct: 239 YAIAQTEDTLEALGEDVGVTKE--AVAIKKGDSDTAKAVQAALQ 280


>gi|154486918|ref|ZP_02028325.1| hypothetical protein BIFADO_00751 [Bifidobacterium adolescentis
           L2-32]
 gi|154084781|gb|EDN83826.1| hypothetical protein BIFADO_00751 [Bifidobacterium adolescentis
           L2-32]
          Length = 315

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 65/227 (28%), Gaps = 13/227 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       + A+G    GFDVD  +AL+     +         N  
Sbjct: 66  DYVTKDGKLTIGMDTSYAPAEFLAADGKTPVGFDVDIAKALAGVFGLEADP---ETANFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ + + DI   +   T  R     + F           +          S L G 
Sbjct: 123 SIIPAVGA-KYDIGISSFTVTKER--LEAVDFVSHFNAGSAWAVKKGNPNKVDTSDLCGK 179

Query: 147 SICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ  T  E       K            I  +   ++       + D +  D     
Sbjct: 180 KVAVQTATMQETAANKMAKQCKADGKAEMDVISSKLQTDVTTNVVTGKADVFYADSP--V 237

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           A         E   L      +P    + +GD +    +      ++
Sbjct: 238 AGYAIAQTDGELETLGKTEGIAPEGIVVKKGDQQMDEALQKALQKLI 284


>gi|271502398|ref|YP_003335424.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270345953|gb|ACZ78718.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 269

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 79/261 (30%), Gaps = 21/261 (8%)

Query: 4   DFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +  + L   +  +       N S      +   L+ G        +    NG   G+DV
Sbjct: 7   RYLSAALFPAIAAVMLNGCDNNTSTQ---TQNNVLRVGTTGQSYPGSYK-ENGTLVGYDV 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    ++  +     +I +   +       L++ ++D ++ N   T  R+      F   
Sbjct: 63  EVAETIAHKLGY---QIAWTTADFSGLMGQLEAGKLDTVANNFVKTTERQK--KYDFTNT 117

Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   +     K I S+  L G ++    G+T    L + F   N       +E  +
Sbjct: 118 YLNYASQIVTSINNKDIQSLDDLKGKTVSGVLGSTHVTNLRNAFP--NNDVTIRTYETRD 175

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLT-------NDRPSEHVILPDIISKSPLAPAIIQG 233
              +    +R   Y      L A              P  +  +    +K+P    ++  
Sbjct: 176 GAMSDVINNRVQGYVNSRPILLAEINKRHLPLKLVGNPISNEQVSFPFAKTPEGNKLLAE 235

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
             +    +       V AE+ 
Sbjct: 236 FNQQLQELRQNGQLKVLAEKY 256


>gi|190889751|ref|YP_001976293.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190695030|gb|ACE89115.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 307

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 86/255 (33%), Gaps = 27/255 (10%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKIQY 80
             L  ++    LK G +     F+   A G   G+ V  C  ++    + +      +++
Sbjct: 31  QTLDRVRTSSALKLGYDPDARPFSF-DAQGKPDGYAVALCNRIADSLRAQLNLSKLDVEW 89

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--- 137
           +PL+   +  A+Q    D++      TL R     ++F    +  G G +++    +   
Sbjct: 90  VPLSGDAKLRAIQDGTADLVCAAEPVTLGR--RQQVSFSLPIFPSGTGALLNASAPLALR 147

Query: 138 -----------------SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                             + + L   +    AGTT+E  L+D  K   +          +
Sbjct: 148 EVLQYGEPSSRPVWRGAPARTILEHKTFSSIAGTTSEDWLSDKIKTFQLAATATPVTDYQ 207

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  A           GD+  L      +D     ++L    +  PL   + +GD ++   
Sbjct: 208 QGIARVLDGSSAVLFGDMPLLMDAAARSDSSGNLIVLERHFTYEPLGLELTRGDEDFRLA 267

Query: 241 VSWTHYAMVTAEELG 255
           V         A++  
Sbjct: 268 VDRALSQAYAAQDFR 282


>gi|56696192|ref|YP_166549.1| His/Glu/Gln/Arg/opine family ABC transporter periplasmic
           substrate-binding protein [Ruegeria pomeroyi DSS-3]
 gi|56677929|gb|AAV94595.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [Ruegeria
           pomeroyi DSS-3]
          Length = 270

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 68/251 (27%), Gaps = 34/251 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     IL    L  ++    A           ++ G       +  +   G+  GF+
Sbjct: 31  MKK----LILTTAALALSAGMAMADT---------VRMGTEGAYPPYNFINDAGEVDGFE 77

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L           +++  +       L S   D +      T  R+    + F  
Sbjct: 78  RELGDELCKRAG---LTCEWVKNDWDSIIPNLVSGNYDTIIAGMSITDERDEV--IDFTQ 132

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                            S  + LSG  +  Q  T     +A+           + F   E
Sbjct: 133 NYIPPTAS----SYVATSDGADLSGI-VAAQTATIQAGYIAE------SGATLVEFATPE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA R    DA   D   L  +   +           +    PL   +  G  E    
Sbjct: 182 ETIAAVRNGEADAVFADRDYLVPIVAESGGELMF-----VGDDVPLGGGVGMGLRESDGE 236

Query: 241 VSWTHYAMVTA 251
           +     A +T+
Sbjct: 237 LRGKFDAAITS 247


>gi|237736370|ref|ZP_04566851.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421412|gb|EEO36459.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 252

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 14/214 (6%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
              L  G N     +  +  NG+  GFD+D   A+   +  +   I +  ++      AL
Sbjct: 19  AKKLYVGTNAEFKPYEYL-ENGEIVGFDIDLMEAIGKKLGYE---IVWHNMSFDGLLPAL 74

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q K+ID +      T  R+ ++  +   +    G   ++ +   ++   +L G  + VQ 
Sbjct: 75  QMKKIDAVIAGMGQTPERQKAVTFSMPYLFIEGGHYVLVAENSPLTKKEELKGKQVGVQI 134

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E          N+   P +++         +  + DA      +            
Sbjct: 135 GTVQEEF------TINVGGIPKLYDSWTGALMDLKNGKVDAVIIADISAEEY---LKNLD 185

Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTH 245
               +  I    P A  A  +G+TE     +   
Sbjct: 186 GIKKIDIIFDTKPGASVAFRKGNTEMAEKFNKAL 219


>gi|309813087|ref|ZP_07706813.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308432971|gb|EFP56877.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 495

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 17/211 (8%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDWKGF 59
               +  L++   T  +  A     + K        +K G       F+  + +    G+
Sbjct: 21  ILSFVAALLLGGLTMTTAAAQQAPAVTKTDDKLPDTIKVGTEGVYAPFSFHQGD-KLTGY 79

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD+ R +   +      ++++       F AL S +ID+++        R         
Sbjct: 80  DVDYFREVGKRLGVK---VEFVETQWDSMFAALDSGRIDVIANQVGANAERRA--KYDLT 134

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     ++     I +++ + G     Q  T+    +A    A+      +  + +
Sbjct: 135 KPYVESHGVVVVRDGSSIKNLADIKGKKSA-QNITSDWAGVAKKAGAN-----VVSVDGM 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++        R D +  D  A+     T++ 
Sbjct: 189 DKAVELLSQGRVDTFVNDELAVKYYLATHEN 219


>gi|220916958|ref|YP_002492262.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954812|gb|ACL65196.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 578

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 59/204 (28%), Gaps = 12/204 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     +  +   G   GF+VD  RA+   +      +++   +       L   
Sbjct: 35  VVVGADRSYPPYEFLDEKGQPAGFNVDLTRAIGEVMG---FTVEFRFGDWAGIRAGLADG 91

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGT 154
            ID+L      +   E +  L F            + K      S+  L+G  + V    
Sbjct: 92  SIDVLQG---ISWSEERARRLDFAAPHAIVHHAIFVRKDGPHPRSIEALAGREVVV---- 144

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + +           I  +   +      + + D     +     L+      S  
Sbjct: 145 FGGGIMDEEITRAGTAARVIRTQTPADALRLLASGQHDCVVLALLPGIYLQRQLG-LSNV 203

Query: 215 VILPDIISKSPLAPAIIQGDTEWY 238
             + + +       A+ +GD E  
Sbjct: 204 EPVGEPVRAERYGYAVRKGDRELL 227


>gi|163743507|ref|ZP_02150885.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Phaeobacter gallaeciensis 2.10]
 gi|161383210|gb|EDQ07601.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Phaeobacter gallaeciensis 2.10]
          Length = 258

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 17/255 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  +      L     +  +           L+ G++ G   F  V+ +   +GF+
Sbjct: 1   MMKPFAWAAAVAASLTAAPSAFASDT---------LRVGMSGGYFPFTFVRQD-VLQGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++        +++++ ++      AL+S +ID ++     T  R          
Sbjct: 51  VDVMNAVAEETG---LEVEFVTMSFSGLIGALESDRIDTIANQITITPERSAKFAFTQAY 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +            +  I+  + L+G ++ V  G+  E  L +  +A   K     +E   
Sbjct: 108 VIDGAQVVVKRGNEDSIAGPADLAGKTVAVNLGSNFEALLRELPEA--DKIEIKTYEANI 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
             D A    R DA+  D  +   L   +  P      P    ++ L            + 
Sbjct: 166 AQDTAL--GRVDAFVMDRVSSAQLIQESPLPLALAGAPFSEIRNALPFRQDADSLALRDR 223

Query: 241 VSWTHYAMVTAEELG 255
           V      +    +L 
Sbjct: 224 VDAALTTLRETGKLA 238


>gi|319945586|ref|ZP_08019838.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319748185|gb|EFW00427.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 520

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 81/284 (28%), Gaps = 29/284 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K  +     L++    S          +K   +L+ G+      F             
Sbjct: 1   MKKTIYALFTGLLLCLGMSHI--------VKADEYLRIGMEAAYAPFNWTQEDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +   P  ++    +      AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKVAEGLGKKPLIVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    ++ + L          +   + L        
Sbjct: 110 ERKKEVA--FSNSYYTSEPVMLVRKDGNYANATSLDDFKDAKVT-SQQGVYLYSLISQLK 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       ++  A  +   DAY  +       +  N +                A 
Sbjct: 167 GAKQETAMGDFAQMRQALESGVIDAYVSERPEALTAESANSKFKMIQFKKGFEVGEEDAT 226

Query: 229 AIIQGD--TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
             I         + V+    A +++E+      ++ +    +++
Sbjct: 227 IAIGMKKGDTRIDQVNAAL-AKISSEDQVKLMDDMIKKQPASSD 269


>gi|320547422|ref|ZP_08041709.1| ABC superfamily ATP binding cassette transporter substrate binding
           protein [Streptococcus equinus ATCC 9812]
 gi|320447899|gb|EFW88655.1| ABC superfamily ATP binding cassette transporter substrate binding
           protein [Streptococcus equinus ATCC 9812]
          Length = 266

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 63/211 (29%), Gaps = 14/211 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L+       +  A                   +  F+     G+  G+D
Sbjct: 1   MIKKCLLGVALLLSTGLAVNAEAAE--------HKAVVATAGDIKPFSYQDKKGNLTGYD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++     S  I  D  +  +        F+ L S    + + N  +T  R       +  
Sbjct: 53  IEVINQASKYI--DGYEFTFKKTAWDSIFVGLDSDIYQVAANNLSYTKERAS--KYLYSV 108

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ER 178
               +    +      I S+  ++G       GT+T   + D+ K H+     I +  E 
Sbjct: 109 PIAKNPLVLVTKDGSDIKSLDDIAGKVTQDDTGTSTAKFIDDWNKKHSDSPSKIEYSGED 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V +      +   D    D  ++  +     
Sbjct: 169 VTKRLLDLDSGEFDYLIFDKISVETIIKQKK 199


>gi|229551216|ref|ZP_04439941.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315379|gb|EEN81352.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 566

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 89/322 (27%), Gaps = 47/322 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---------- 49
           M K +   +  L         + A+  +         K G+  G   F            
Sbjct: 35  MRKHWVARLGVLGFALSLLLGSFAATPVSAASDDNTFKVGMEAGYAPFNWTQTTSANNAV 94

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
            ++ + ++  G+DV   R ++ A+      +  +  +      AL S +ID +      T
Sbjct: 95  KIQGSQEYANGYDVQIARKVAKALHKK---VVVVKTSWDGLPPALTSGKIDAIIAGMSPT 151

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
              +    + F    Y      ++ K        S++   GA I  Q  T     +    
Sbjct: 152 P--DRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKITAQLSTYHYQAINQI- 208

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
               +   P        +  A  +   D Y  ++      +  N                
Sbjct: 209 --KGVVKEP-AMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKG----- 260

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL--GIDKS 282
                    DT     +                +  IN++    +  +  R +   +D  
Sbjct: 261 -QGFKTDASDTNLAIGLRK----------NDPNKAKINELLATISTKERARLMNEAVDNQ 309

Query: 283 SNIGEALGLTKDWTYRIIRHMG 304
            +  +    + +W   I++  G
Sbjct: 310 PSTEK----SGNWFMAIMKQYG 327


>gi|326381366|ref|ZP_08203060.1| ABC transporter substrate-binding/permease protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199613|gb|EGD56793.1| ABC transporter substrate-binding/permease protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 581

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 82/231 (35%), Gaps = 18/231 (7%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +AS L  IK  G +  G  +       V +   + G D +  +A+++ I     K++++ 
Sbjct: 76  DASKLNLIK-PGTIVVGTLSDAPPSICVNSQQQYTGMDNEMLKAIAAKIG---LKVEFVG 131

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    +   + D+   ++  T   E    + F     F     +      + S + 
Sbjct: 132 TEFSGLLAQVAGHRYDV--GSSSITTTDERRQTVDFTNGYDFGYFALVGPANGKVQSFND 189

Query: 143 LS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           L+ G  I V  GT     + D +  + +K + + F       A  ++ + D +       
Sbjct: 190 LNAGTRIGVVQGT-----VQDDYVTNILKLNAVKFPDYATAYANLKSGQIDVWVAPSQQA 244

Query: 202 YALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYNIVSWTHYAMVT 250
                    PS+ + + +         A A+ +G+    + ++    A++ 
Sbjct: 245 EGTVQ----PSDGIKILENTFSINNFTAWAVAKGNQPLVDALNSGLDAIIA 291


>gi|254455938|ref|ZP_05069367.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082940|gb|EDZ60366.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
          Length = 283

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 73/230 (31%), Gaps = 37/230 (16%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K   +++L  +++    ++        IK       G       +    A+G+  GF+V
Sbjct: 4   FKKTILTVLASLLVIGNVYA------DKIK------IGTEGAYPPWNSKDASGNLIGFEV 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + L + +    ++   +  +      AL  ++ D +      T  R+ +  + F   
Sbjct: 52  ELAQELCAIM---KAECTIVEQDWDGMIPALLMRKFDAIMAGMSITAERQKT--ITFSQG 106

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGAS------------------ICVQAGTTTELTLADY 163
              +     + K   +  +    G +                  +  +   T   T+   
Sbjct: 107 YADEVASLAVMKGSSLEGMDTPEGVNLTLGGSSVKKALKTITGALAGKTVCTQTGTIHQN 166

Query: 164 FKAHNM--KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           F       K +   ++  +E++    + RCD       A       + +P
Sbjct: 167 FLESGDVGKVNVRTYKTQDEVNLDLTSGRCDVALAAAVAFTDYADKSGKP 216


>gi|218674701|ref|ZP_03524370.1| extracellular solute-binding protein family 3 [Rhizobium etli GR56]
          Length = 312

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 38/240 (15%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS------------------ILGDIKK-----RGFLKCG 39
           +      + +  + F S                         + +IK       G    G
Sbjct: 8   RLLIAGAVTIGAIGFGSAEAQQKFDLSPEQPNRLRVEKSEKRIAEIKDFKFVRSGVFTVG 67

Query: 40  IN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           I+    L        +    G+DVD  +A++ ++     K+  + +   +  L L S + 
Sbjct: 68  ISSGGNLPLHDYASDSKTVIGYDVDLAQAIADSLG---LKLNLVSVAWADWPLGLTSGKF 124

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQAGT 154
           D +  N   T  R       F      D  GF +     I+S      ++G  +   AGT
Sbjct: 125 DAVISNVTVTEER--KQKFDFS-TYRKDELGFYVRADNPITSIKEPKDIAGLKVITDAGT 181

Query: 155 TTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             E  L ++ + +            ++       A R+ R D      + L  +   +  
Sbjct: 182 NQEKILLEWDRQNVAAGLKPIEVQYYDDDAASLLALRSGRADVIVQPHAQLVFIAARDKN 241


>gi|218961901|ref|YP_001741676.1| putative ABC-type amino acid transport system, periplasmic
           component [Candidatus Cloacamonas acidaminovorans]
 gi|167730558|emb|CAO81470.1| putative ABC-type amino acid transport system, periplasmic
           component [Candidatus Cloacamonas acidaminovorans]
          Length = 221

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 72/224 (32%), Gaps = 15/224 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G +     F   + + ++KG D++ C+ ++  +       ++      E F AL   
Sbjct: 1   MRVGTDAENPPFTYQEGS-EFKGIDIEICKRIADKLNMQLQITKFQ---FDELFSALALN 56

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG 153
           +IDI +     T  R+ ++   F    +      +        +  +  L    +  Q+ 
Sbjct: 57  KIDIAASAITITPKRKQTM--DFTIPYFETDLAVVAKSNSPVKVEKIEDLGKYIVGCQSN 114

Query: 154 TTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           TT+   L +     +   K    ++  V E        + D    D           +  
Sbjct: 115 TTSHQYLTENLMEKDLLPKNKLKLYPTVIETLGELLNGKIDLMVFDEWVAKDFSQQQE-- 172

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               I+  I +      A+  G      I +     +  + EL 
Sbjct: 173 --IKIVYTIQTNEQYGLAMQAGKEINTRI-NKALKELKDSGELE 213


>gi|149276547|ref|ZP_01882691.1| histidine-binding periplasmic protein [Pedobacter sp. BAL39]
 gi|149233067|gb|EDM38442.1| histidine-binding periplasmic protein [Pedobacter sp. BAL39]
          Length = 228

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 78/214 (36%), Gaps = 12/214 (5%)

Query: 33  RGFLKCGINTGLV-GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +  LK G+++           +  ++GF+VD   A+++ +  +   I+Y     +     
Sbjct: 4   KKVLKVGLDSAAPFPMHSDYNSERFEGFEVDLLAAITADLDYE---IEYEVSLWQNILEK 60

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L   ++DI+      T  R     L F           ++     ++SV      +I V+
Sbjct: 61  LFKGELDIICSAVTVTPSR--RHILEFSDPYLHFRLCAVIPADSSLNSVDDFRNKTIGVR 118

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T  E  +   F A+NM    +  E  +E+    +A + D    D          N + 
Sbjct: 119 IATEAEKHVHTKFPANNM----VHAETNKELYRKLQAGKIDMLIDDSPIAGGFLQNNPKL 174

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              + +PD  S    A A+ +GD E     +   
Sbjct: 175 KIGMFMPDTDSH--YAIAMKKGDVELTKQFNAAL 206


>gi|134098189|ref|YP_001103850.1| cyclohexadienyl dehydratase [Saccharopolyspora erythraea NRRL 2338]
 gi|291009119|ref|ZP_06567092.1| cyclohexadienyl dehydratase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910812|emb|CAM00925.1| cyclohexadienyl dehydratase [Saccharopolyspora erythraea NRRL 2338]
          Length = 271

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 59/226 (26%), Gaps = 15/226 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           + L  + +RG L+         F    A+G W G D+D    L++ +    + +      
Sbjct: 40  NRLEQVAQRGELRVCSTGDYRPFTYRDASGAWSGIDIDMAHDLAARLGVRATIVPTTWKT 99

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSV 140
               F     ++ DI       TL R       F      DG+  I   +          
Sbjct: 100 LMRDFR----QRCDIAVGGVSITLERAKQAA--FSRAYVVDGKTPITRCENAERFGTLEQ 153

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
               G    V  G T E       K        +       I     A   D    D + 
Sbjct: 154 IDQPGVRAIVNPGGTNEQFARQNLKRA----TIVEHPDNNTIFEQVIAGHADLMMTDAAE 209

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +         V      + S  A  +  GD  +   V     
Sbjct: 210 T-KWQAKQHPELCAVHPDQPFTFSEKAYLLPLGDVVFQQWVDQWLN 254


>gi|148655980|ref|YP_001276185.1| extracellular solute-binding protein [Roseiflexus sp. RS-1]
 gi|148568090|gb|ABQ90235.1| extracellular solute-binding protein, family 3 [Roseiflexus sp.
           RS-1]
          Length = 277

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 86/245 (35%), Gaps = 14/245 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDI----KKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
             +    L +   T  +     L  +    ++R  L+  ++ G   F  +  +G   G+D
Sbjct: 25  VIIGYAALAVSAQTGLNVAGQGLDPVWAAAQQRRTLRVAVDLGFYPFTWM-EDGQPAGYD 83

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+++ +     +++++P+     +  L +++ D+           E+     F  
Sbjct: 84  IDLARAIATRLG---MQVEFVPVGLDSIYDDLAARRADVAISALP--YAPELGWRARFSQ 138

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  GQ  ++     I++ + L+G  + V  G+  +                  ++  +
Sbjct: 139 FYFDAGQMLVVRSDTPIATEADLAGRVVGVALGSDADTWARRRLMEGASFVLRADYDTPD 198

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA R    DA   D +A              + +   ++  P   AI       +  
Sbjct: 199 EALAALRRGDVDAVAVDHAAALIALAHAPE----LRIAQALTFEPYVIAIAPEAYRLHEA 254

Query: 241 VSWTH 245
           V+   
Sbjct: 255 VNQAL 259


>gi|289678117|ref|ZP_06499007.1| prephenate dehydratase [Pseudomonas syringae pv. syringae FF5]
          Length = 262

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 81/262 (30%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + ++  L++              L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKYSALTALLLGITGMAQAQDYTSHLDKVLQTGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          +    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCADQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLSKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W   V    +      E  
Sbjct: 229 DVTWKGYVDQWLHLSKATGEYQ 250


>gi|229589036|ref|YP_002871155.1| cyclohexadienyl dehydratase [Pseudomonas fluorescens SBW25]
 gi|229360902|emb|CAY47762.1| cyclohexadienyl dehydratase precursor [Pseudomonas fluorescens
           SBW25]
          Length = 263

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 85/256 (33%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M     +  LC++ L  ++ +  A S L ++ +RG L          +  ++A+G ++G 
Sbjct: 8   MK---ALLALCVLGLATSALADTAPSRLDEVLQRGTLAVCTTGDYKPYTSLRADGSYEGI 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    +L+ ++    +KIQ++P   K       +++ DI       +L R+     +  
Sbjct: 65  DIAMAESLAKSL---NAKIQWVPTTWKTLMPDFLAQRCDIAVGGISVSLERQKKAFFSQT 121

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                          +   +V Q++   + V           + F   ++    I     
Sbjct: 122 LGVDGKIPLVRCADVQRYQTVEQINQPQVRVIEPAGGT---NEVFARTHLGQAQIRLHDN 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +     A + D    D S     +         V     +  S  A  + + D  W +
Sbjct: 179 VTLFDELLAGKADVMITDASE-ARYQQKLKPGLCAVNPERQMQYSEKAFLLPRDDVAWKS 237

Query: 240 IVSWTHYAMVTAEELG 255
            V    +  +      
Sbjct: 238 YVDQWLHLSMATGVYD 253


>gi|146329621|ref|YP_001209413.1| extracellular solute-binding family protein [Dichelobacter nodosus
           VCS1703A]
 gi|728750|sp|P39906|AABA_DICNO RecName: Full=Amino-acid-binding protein AabA; Flags: Precursor
 gi|458689|gb|AAC43388.1| AabA [Dichelobacter nodosus]
 gi|146233091|gb|ABQ14069.1| bacterial extracellular solute-binding family protein
           [Dichelobacter nodosus VCS1703A]
          Length = 253

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 15/243 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   LC I    + F   A +   I+            L+  + +   G   GF+ +
Sbjct: 5   KTLFRGALCSIACGASLFCA-ADVYRIIRN--------YPELMPVSYMDEKGSPTGFETE 55

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R ++     D  K +++  N  +   AL++ + D+       T  R       F    
Sbjct: 56  LIRKIAEQAQLD-LKEEFVA-NFGDTLTALENGKADLAMATISVTPAR--QQIFDFTTPY 111

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +       + K   I ++  L+   + V  G+  E  + +  K        I  + +   
Sbjct: 112 FRVNPFAFITKDDSIKTIQDLANKKVSVWTGSNHEQKIKEIQKEG--TGSVIPAKSIFLA 169

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A      D   GD + +        + +   ++         A A+ +GD      + 
Sbjct: 170 VKAVIQGEADVAVGDDAYMLNFADRYKQHNLKAVIDRSTEPESYAIAVRKGDQALKKKID 229

Query: 243 WTH 245
              
Sbjct: 230 DAL 232


>gi|170699477|ref|ZP_02890520.1| Arogenate dehydratase [Burkholderia ambifaria IOP40-10]
 gi|170135626|gb|EDT03911.1| Arogenate dehydratase [Burkholderia ambifaria IOP40-10]
          Length = 267

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 76/237 (32%), Gaps = 15/237 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+  RG L+         ++  + +G ++G D+D   +L+ ++      ++    N  
Sbjct: 38  LDDVLARGTLRVCTTGDYKPYSYYRTDGRFEGIDIDMAESLAKSLGVKADFVKTSWSNLT 97

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS----Q 142
             F+A    + DI       TL R+    + F      DG+  I          +     
Sbjct: 98  NDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTAIARCSDADKYQTVAQID 151

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T E     +F   N+     V+     I     A + D    D S   
Sbjct: 152 RPETRVIVNPGGTNERFAKQFFTHANLS----VYPDNVTIFKQILAGKADVMVTDASETL 207

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L+   +     V           A  + +GD  +   V    +  +++ E      
Sbjct: 208 -LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVAFQQYVDQWLHLALSSGEYQAISD 263


>gi|19552550|ref|NP_600552.1| ABC-type transporter, periplasmic component [Corynebacterium
           glutamicum ATCC 13032]
 gi|21324100|dbj|BAB98725.1| ABC-type transporter, periplasmic component [Corynebacterium
           glutamicum ATCC 13032]
          Length = 334

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 12/218 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +   + +RG L  G N     F    ++G   G ++D  RA++  +  + S      
Sbjct: 81  QAMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMDLVRAMAGVMGLEFSP---QE 137

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +      ++Q+  +DI +        R       F    +   Q      ++       
Sbjct: 138 QDFSLILPSVQAGTLDIGASGFTDNEER--RENFDFIDFLFAGVQWAQATDRETPIDPEN 195

Query: 143 LSGASICVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G ++ VQ  T  E        A            + +E  +    A    R DA   D
Sbjct: 196 ACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTAATALILGRADALAAD 255

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                     ++      ++ D+   +P   A      
Sbjct: 256 SPVSAWAAERSE--GRIEVVGDMYLAAPFGFAFPLESD 291


>gi|302186047|ref|ZP_07262720.1| prephenate dehydratase [Pseudomonas syringae pv. syringae 642]
          Length = 262

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 81/262 (30%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M      ++  L++    +         L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKHSALTALLLGITGTAQAQDYTSHLDKVLQAGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          +    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCADQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W   V    +      E  
Sbjct: 229 DVTWKGYVDQWLHLSKATGEYQ 250


>gi|119025486|ref|YP_909331.1| ABC transporter solute-binding protein [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765070|dbj|BAF39249.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 315

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 65/227 (28%), Gaps = 13/227 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       + A+G    GFDVD  +AL+     +         N  
Sbjct: 66  DYVNKDGKLTIGMDTSYAPAEFLAADGKTPVGFDVDIAKALAGVFGLEADP---ETANFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ + + DI   +   T  R     + F           +          S L G 
Sbjct: 123 SIIPAVGA-KYDIGISSFTVTKER--LEAVDFVSHFNAGSAWAVKKGNPNKVDTSDLCGK 179

Query: 147 SICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ  T  E       K            I  +   ++       + D +  D     
Sbjct: 180 KVAVQTATMQETAANKMAKQCKADGKAEMDVISSKLQTDVTTNVVTGKADVFYADSP--V 237

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           A         E   L      +P    + +GD +    +      ++
Sbjct: 238 AGYAIAQTDGELETLGKTEGIAPEGIVVKKGDQQMDEALQKALQKLI 284


>gi|322373899|ref|ZP_08048434.1| ABC transporter, substrate-binding protein [Streptococcus sp. C150]
 gi|321277271|gb|EFX54341.1| ABC transporter, substrate-binding protein [Streptococcus sp. C150]
          Length = 287

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 77/258 (29%), Gaps = 19/258 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK----------KRGFLKCGINTGLVGFAEV 50
           M     + I  + I      +  +S   D             +  +          F+  
Sbjct: 1   MKLKKILGITGVAIASVALLAACSSKSKDTSSDTSSSKSSGAKETVNFATVGTTAPFSY- 59

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G+  G+DV+  +A+      D  ++++        F  L S +  +   N  ++  R
Sbjct: 60  EKDGELTGYDVEVAKAVFKD--SDKYEVKFQKTEWSSVFTGLDSAKYQMAGNNISYSEER 117

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           +      F            + K   I     ++G S  V  GT+T   L ++   H+ K
Sbjct: 118 D--QKYLFSYPIGTTPAVLTVPKDSKIKKYDDIAGHSTQVVQGTSTATQLTEFNDKHSDK 175

Query: 171 YHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
              + +      ++       + D    D        + N++ +    +     + P   
Sbjct: 176 PVELNYTNENITQMLTNLNEGKYDFKIFDAP-TVNSIIKNNKLTNLKTIELKSDQQPYIY 234

Query: 229 -AIIQGDTEWYNIVSWTH 245
                   +    V+   
Sbjct: 235 FLFADNQKDLQKFVNKRL 252


>gi|299783365|gb|ADJ41363.1| Amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus fermentum CECT 5716]
          Length = 287

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 73/251 (29%), Gaps = 18/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
            K   +S++ L+ +  T+   +      +  +       +  L   +          G+D
Sbjct: 6   KKLIGLSLVALVGVGLTACGKSQD--QKVADQKTWTVATSGTLYPTSYHDPKTKKLTGYD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA++  +      + +   N   +  A+++ +  +   +   +  R+    ++   
Sbjct: 64  IEVIRAVAKGLHKK---VVFKEYNVDGQLTAVKTGKAQMAVNDFAISPERKNQFLMSSPI 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              F+        + GI S + + G         T    LA    A  + Y  +     +
Sbjct: 121 KHSFNSLLVRKDDQSGIHSWADIKGKK-AAGEAGTNYQRLAQQLGAKLVNYDNV---SND 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAIIQGD 234
                 ++ + D    D                   P  + +  +          I + D
Sbjct: 177 VYLKGVQSGKTDLIMNDYYLQKLALAAYPNSGLEIDPDMYFVTNEDGKGE--GIVINKKD 234

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 235 KALQKEVNEEL 245


>gi|330975790|gb|EGH75856.1| prephenate dehydratase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 262

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 81/262 (30%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + ++  L++              L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKYSALTALLLGITGMAQAQDYTSHLDKVLQTGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          +    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCADQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLSKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W   V    +      E  
Sbjct: 229 DVTWKGYVDQWLHLSKATGEYQ 250


>gi|313890332|ref|ZP_07823964.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121318|gb|EFR44425.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 523

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 63/221 (28%), Gaps = 26/221 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG------ 54
           M K        L+ LF  S    A          +L+ G+      F   +         
Sbjct: 1   MKKLLLTCFFALLFLFGGSNLAQAD--------NYLRVGMEAAYAPFNWTQDTNANGAVP 52

Query: 55  -----DWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++ ++      ++    +      AL SK+ID+++     T 
Sbjct: 53  IEGTDQYANGYDVQIAKKVAKSLDKKLLVVK---TSWTGLIPALTSKKIDMIAAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F    Y      ++      +    L+  +            +    +   
Sbjct: 110 ERKK--EITFSDSYYTSEPVIVVKADSKFAKAKSLADFAGAKITAQQGVWHVNLIPQIKG 167

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           +K          ++  A  +   D Y  +       +  N 
Sbjct: 168 VKAQT-PMGDFSQMRQALSSGVIDGYISERPEAMTAQQANS 207


>gi|227820743|ref|YP_002824713.1| predicted extracellular amino acid solute-binding protein
           [Sinorhizobium fredii NGR234]
 gi|227339742|gb|ACP23960.1| predicted extracellular amino acid solute-binding protein
           [Sinorhizobium fredii NGR234]
          Length = 283

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 61/218 (27%), Gaps = 10/218 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +  +G   GF VD  R +   +  + SK Q   +   E   AL+  
Sbjct: 52  LRFLTTVDFPPFNFIDQSGKLSGFHVDLAREICRELEIE-SKCQIQAVTYPELMPALEQG 110

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q + +      T         +   +             +G+ S + L G  I   AGTT
Sbjct: 111 QGEAIVAGIAVTPELRRRFAFSRAFMQMPARFALNRKAAEGVKSPADLVGKPIGAVAGTT 170

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--- 212
            E  L  +F     +     +   + +  A R     A   D   L      +       
Sbjct: 171 HEAMLKAFFP----QLEAKAYPDRDALLNALREGAVTAAFSDAMQLSFWVSGSVAAGCCT 226

Query: 213 --EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +     +      L       +      +     A+
Sbjct: 227 LLDGAYFSERFLGEGLTIMNRTTEPALTQAIDHALLAL 264


>gi|126737595|ref|ZP_01753325.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Roseobacter sp. SK209-2-6]
 gi|126720988|gb|EBA17692.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Roseobacter sp. SK209-2-6]
          Length = 272

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 78/246 (31%), Gaps = 13/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M + F V     I L     +T  S L +I   G LK G                 +KGF
Sbjct: 17  MKRAFQVVAAAAISLALAGAATAQSALNEILDGGVLKVGTTGDWNPMTLRDPATNSYKGF 76

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +  +   ++++P + K     + + +  + + +   +  R    G +  
Sbjct: 77  DIDIMTELAKDLGVE---VEFVPTDWKTLVNGVVAGKYHM-TGSASISPPRMKVAGFSES 132

Query: 120 PITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            I+       +                   +    GTT E  + ++F          V E
Sbjct: 133 YISVELYPFTLKANADRFDGYESINQPDVKVATTLGTTFEKRVREWFP----NADIKVVE 188

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                     A R D +         L+     P   V      S SP+A  + Q D  W
Sbjct: 189 APARGFQEVLAGRADVFITSNIEGSTLEAKF--PVVRVKGTGPRSPSPIAMLLPQSDQVW 246

Query: 238 YNIVSW 243
            N V+ 
Sbjct: 247 INYVNN 252


>gi|113460398|ref|YP_718460.1| arginine ABC transporter substrate-binding protein [Haemophilus
           somnus 129PT]
 gi|112822441|gb|ABI24530.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Haemophilus somnus 129PT]
          Length = 241

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 81/259 (31%), Gaps = 31/259 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L   +L   +   NA           +   +      F      G+  GFD
Sbjct: 1   MKK-----LLLATMLAGATIGANAQD---------ITFAMEPSYPPFELTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +          +L   +    +  +   +    +  +AF  
Sbjct: 47  VDIANAICKEI---QANCSFKAQAFDALIPSLIKGRGGFDAAISAIDITEARAKQVAFTD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +++ G    VQ GTT +  +    K    +Y    +  ++
Sbjct: 104 SYYESSASFIALKGKADLTTAKVVG----VQNGTTYQQYVNKESK----QYQSKSYASLQ 155

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
           +     +  R D   GD   L  +   +  P    +   +  K      L  A+ + +T 
Sbjct: 156 DAILDLKNGRIDLIFGDTDVLRDMF--DKNPELQFVGERVTDKRYFNNGLGIAVNKKNTA 213

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 214 LVEQLNKGISAIKANGEYQ 232


>gi|187779946|ref|ZP_02996419.1| hypothetical protein CLOSPO_03542 [Clostridium sporogenes ATCC
           15579]
 gi|187773571|gb|EDU37373.1| hypothetical protein CLOSPO_03542 [Clostridium sporogenes ATCC
           15579]
          Length = 278

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 81/249 (32%), Gaps = 12/249 (4%)

Query: 7   VSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           VS L +I L        + ST     G+ K    +  G +     +   +A G  +GF++
Sbjct: 17  VSALAVITLLAGCGKEKATSTEGQNTGNSKSEKKIIVGTSPDYYPWCYTEA-GKLQGFEI 75

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    +      D   I++        F  L + QID ++     T  R       F   
Sbjct: 76  DVWNEIGKKAGYD---IEFKQSKFSGLFGMLDAGQIDTVAHQISTTEERRK--KYDFTET 130

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             + G  F+++K K I ++  L G  +    G   E TL    +  ++    + +++   
Sbjct: 131 YAYSGYSFVVNKDKDIKNLEDLKGKKVGCTLGGNGEKTLKKLNEEKSLNIKVLTYDQTP- 189

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           ++      R DA          +        +      +   +         + +    +
Sbjct: 190 MEKDVEIGRLDAAWIGTVKAKTVIEKEKMDLKLYDPKYVFEINQYPFKKDGKNKKMLEDI 249

Query: 242 SWTHYAMVT 250
           +     M+ 
Sbjct: 250 NKAIKDMMA 258


>gi|227824756|ref|ZP_03989588.1| extracellular solute-binding protein [Acidaminococcus sp. D21]
 gi|226905255|gb|EEH91173.1| extracellular solute-binding protein [Acidaminococcus sp. D21]
          Length = 279

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 73/237 (30%), Gaps = 18/237 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-----ANGDWKGFDVDFCRALSSA 70
              +  TN     +   +  LK   N   V F            D+KG ++D  R ++  
Sbjct: 20  SVAACGTNKETAKNADAKKVLKIATNATYVPFEFKDKGTSGDESDYKGMEIDMIREVAKR 79

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +P   Q   +       A+QSKQ+D+ +     T  R     +AF    Y      +
Sbjct: 80  LGREP---QMENIPFNGIIPAIQSKQVDVAATGMTMTKERAK--KVAFAAPFYESKLAIV 134

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           +     + S + L G ++ V  GTT          A +       F+         +   
Sbjct: 135 VPTDSPVQSAADLKGKNVAVMVGTTGAKY------AESHGMVAKQFDSSANALLEVQVGN 188

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEWYNIVSWTH 245
             A   D            +    V +  I       L   + Q D E  + ++   
Sbjct: 189 APAAIVDKPVGEYFSTLEGKGKGKVRVIPIPDSKSELLGFVLNQDDKELKDAINKAI 245


>gi|15604026|ref|NP_220541.1| amino-acid ABC transporter binding protein (yqiX) [Rickettsia
           prowazekii str. Madrid E]
 gi|3860717|emb|CAA14618.1| AMINO-ACID ABC TRANSPORTER BINDING PROTEIN (yqiX) [Rickettsia
           prowazekii]
 gi|292571745|gb|ADE29660.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           prowazekii Rp22]
          Length = 241

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 61/210 (29%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +                 L  G       +  ++ +G+  G D
Sbjct: 1   MK---FLKIFLLSFLLVSCGKKETE--------KTLIVGTAADNPPYEFIQ-DGEIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      I     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAISQRLNKK---IIIKNFDFNGLLAALISENIDVAIAALSVTPERSEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I +   L    + VQ G+  E    D   +H M           
Sbjct: 104 SYAKARFAIIYRTGDNIQNSKDLYNKIVGVQLGSVLEKKAQDL--SHKMNIKVHALANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKAKVIDAIISEEFQGKKLKENNSN 191


>gi|197122181|ref|YP_002134132.1| histidine kinase [Anaeromyxobacter sp. K]
 gi|196172030|gb|ACG73003.1| histidine kinase [Anaeromyxobacter sp. K]
          Length = 578

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 59/205 (28%), Gaps = 12/205 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  +   G   GF+VD  RA+   +      +++   +       L  
Sbjct: 34  TVVVGADRDYPPYEFLDEKGQPAGFNVDLTRAIGEVMG---FTVEFRFGDWAGIRAGLAD 90

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153
             ID L      +   E +  L F            + K      S+ +L+G  + V   
Sbjct: 91  GSIDALQG---ISWSEERARRLDFAAPHAIVHHAIFVRKDGPQPRSIEELAGREVVV--- 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 + +           I  +   +      + + D     +     L+      + 
Sbjct: 145 -FGGGIMDEEITRAGTAARVIRTQTPADALRLLASGQHDCVVLALLPGIYLQRQLG-LTN 202

Query: 214 HVILPDIISKSPLAPAIIQGDTEWY 238
              + + +       A+ +GD E  
Sbjct: 203 IEPVGNPVRAERYGYAVRKGDRELL 227


>gi|300814726|ref|ZP_07094974.1| bacterial extracellular solute-binding protein, family 3
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511113|gb|EFK38365.1| bacterial extracellular solute-binding protein, family 3
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 274

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 74/257 (28%), Gaps = 35/257 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K F + +   ++L   +           +    LK G+  G   F             
Sbjct: 1   MRKIFKLLVALSLVLTLVACGK-----DKKEDENVLKVGMECGYAPFNWTQLDDKNNGAQ 55

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +    ++  G+DV   + ++ A+      +  +         ALQ+ +ID++      T 
Sbjct: 56  IDGAKEYAGGYDVMMAQKVAQALGKK---LVIVKTEWDGLPPALQAGKIDLIMAGMSPTP 112

Query: 109 LREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            R   +   F    +      I+    K +   S++   GA I  Q  T     +     
Sbjct: 113 DRAKEVQ--FTEPYWQSQYVMIVKRGSKYENAKSLNDFKGAKISAQLNTVHYDLIDQIDG 170

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
               +          E+  A ++   D Y  ++    +++           L  +     
Sbjct: 171 VIKEEAQ----SSFPELRVALQSGVIDGYVAEVPEAKSVESATKD------LVSVNFPEG 220

Query: 226 LAPAIIQGDTEWYNIVS 242
               +          V 
Sbjct: 221 QGFTVKDNSNLVSAAVK 237


>gi|302524785|ref|ZP_07277127.1| secreted protein [Streptomyces sp. AA4]
 gi|302433680|gb|EFL05496.1| secreted protein [Streptomyces sp. AA4]
          Length = 315

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 15/249 (6%)

Query: 11  CLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALS 68
             ++    +    A  L   + +   L+   N          A+G    G++VD  +A+ 
Sbjct: 46  TALLGSIKADPQLAGALPPAVAQAKTLRLASNIQSAPNNFYAADGKTPIGYEVDLAKAVG 105

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           + +      + Y  L       +LQS ++D+     + T  R     + F    +  G  
Sbjct: 106 AKLG---VTVAYQDLAFGSLITSLQSGRVDLTMAAMNDTKER--QQQIDFVD-YFSSGIT 159

Query: 129 FIMHK--KKGISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEI 182
            ++ K    GI+    L G ++ V  GT+ +       A   +A          +   + 
Sbjct: 160 IMIRKGNPDGITGPDTLCGKNVAVVQGTSHQKFATAQSAKCTQAGKPAITVTATDSDNQN 219

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIV 241
               R  R  A   D+ +   +  T        ++P   I   P      + +++  + V
Sbjct: 220 QNQLRTGRVAAILNDLPSAVYISRTAGDGKFFEVVPGQPIEGGPYGMGFAKNNSKLRDAV 279

Query: 242 SWTHYAMVT 250
                ++V 
Sbjct: 280 KQALQSLVA 288


>gi|229031182|ref|ZP_04187192.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1271]
 gi|228730221|gb|EEL81191.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH1271]
          Length = 263

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 9/243 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +      +  +           +K G + G   F   +   + KGFD
Sbjct: 1   MKKSSLLLTLALTVSVGVLSACGSDTASKKTDEKVVKVGTSAGRSPFIFKEGE-NVKGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A +         +++   + +  F  L S +ID ++     +  R+      F  
Sbjct: 60  AEIIEAAAKKAGYK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSI 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G  F + K    I S+  L G ++ V  GT  E  L    K +         +  
Sbjct: 115 PYVYSGSVFAVKKDNHTIKSLEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTFSEDPT 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DAY  D   +          +  V    +     +A    +   +  N
Sbjct: 175 AE-LNEVGLGRVDAYYNDKVQVETTITKAKLDNVKVGFGPLEWGE-IAFPFAKKSEKLEN 232

Query: 240 IVS 242
           I  
Sbjct: 233 INK 235


>gi|170693090|ref|ZP_02884251.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia graminis C4D1M]
 gi|170142088|gb|EDT10255.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia graminis C4D1M]
          Length = 284

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 15/259 (5%)

Query: 1   MY-KDF--FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M  K     +  LC+     +  + +AS    L  I++ G ++ G       FA    +G
Sbjct: 1   MKAKRTSGLLGALCVAAATLSMAAQHASAETTLQRIQRTGEVRIGY-ANEAPFAYTTPDG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G   +  R + + +      +  +          L++ + D+++     T  R    
Sbjct: 60  KVTGESPEIARKIFARMGVKK--VDGVLTEWGSLIPGLRAGRFDVIAAGMYITPER--CK 115

Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +AF    Y      ++ K     + S + +        A     + LA+   A      
Sbjct: 116 QVAFANPQYQIQDTLLVPKGNPKNLHSYADIGKQPDIKLAVMAGAVELANSRDAGVKDAQ 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAI 230
            +          A RA R DA  G    +  L        E       D       A A 
Sbjct: 176 LMQVPDTTAQLQAVRARRADAAAGTALTMKGLAAKASDQVEAVANFKGDPKHTGYGALAF 235

Query: 231 IQGDTEWYNIVSWTHYAMV 249
              DT+  + V+   +  +
Sbjct: 236 RPEDTDLRDAVNKQLHDWL 254


>gi|167756842|ref|ZP_02428969.1| hypothetical protein CLORAM_02391 [Clostridium ramosum DSM 1402]
 gi|167703017|gb|EDS17596.1| hypothetical protein CLORAM_02391 [Clostridium ramosum DSM 1402]
          Length = 247

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 78/257 (30%), Gaps = 20/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V ++C +     +   N+           +  GI+     +  ++   D  GFD
Sbjct: 1   MKKLLKVLLVCTMAFTLAACGGNSGS----DGTKEILIGISPDYPPYESLEGK-DMVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQ--YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D  + L   + D+    +  +  ++      +L S QID+                + +
Sbjct: 56  IDMTKELFKIMNDNGGNYEYKFKQMSFDTISTSLISDQIDLGISGFTM----HKDWDVLW 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   Q  ++     I++ + L G +I  Q   T E    D   A       +    
Sbjct: 112 SDKYNDSRQVALVANDSTITTKADLEGKNIGAQLAATGESVANDIKDAKVKAVKDVKVL- 170

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                    +   DA   D +              + +L + + +        +G  +  
Sbjct: 171 ----IETLNSGGIDAIILDEAVAKNYVEQ----GGYKMLDETLLEEENLIIANKGSEDLI 222

Query: 239 NIVSWTHYAMVTAEELG 255
             ++      + +++  
Sbjct: 223 KDINKALAEFIKSDKYQ 239


>gi|150377914|ref|YP_001314509.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150032461|gb|ABR64576.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 278

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 71/216 (32%), Gaps = 9/216 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G       +A   ++G++ GFD++    ++  I     ++ +          ++ +
Sbjct: 47  TVSVGTMGDAKPYAFTTSDGNFTGFDIELFLNVAERIGFKKDQVIFTGQEFAALMPSVAN 106

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D+ +     T  R+ +  + F           +      I+  + L G  + V  GT
Sbjct: 107 SRFDVAAAAIGTTEKRKET--VDFSDGYIAGYLSVLTADAS-ITDAAGLKGKRLGVVQGT 163

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E+     F         + F       AA      +A+  D     A   ++  P   
Sbjct: 164 LQEIYAEKNF----TGADLVKFPDNNSAVAALNNATVNAHFLDYE--AAKDYSSRYPELK 217

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + +      +P    + +G+      ++   +A + 
Sbjct: 218 IAINIPSFDAPAGFVVRKGNDALREALNKALHAAMQ 253


>gi|325963972|ref|YP_004241878.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470059|gb|ADX73744.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 311

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 15/219 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L+ G  +       +  +G + G+D +  RA++  +     +++++  +       + 
Sbjct: 73  GKLEVGTLSDAPPNIFIDPSGKFTGYDNELLRAIAGKLG---LEVEFVATDFSALLSQVS 129

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152
           +KQ D+ S +   T  R  ++G  F     F     +      I     L+    I V  
Sbjct: 130 TKQFDVGSSSISTTEARRQNVG--FTNGYDFGFMAVVAKSDGDIKGFDDLTSDLRIGVVQ 187

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     + D +  + +   PI F     + A  R  + DA+                  
Sbjct: 188 GT-----VQDDYVTNTLGMEPIRFPDYATVYANVRNGQVDAWVAPSQQAEG---QVKEGD 239

Query: 213 EHVILPDIISKSPL-APAIIQGDTEWYNIVSWTHYAMVT 250
              I+   ++     A A+ + +    + ++    A++ 
Sbjct: 240 GTAIVESKVNTENFTAYAVAKDNQPLIDALNSGLDAVIE 278


>gi|323485323|ref|ZP_08090672.1| hypothetical protein HMPREF9474_02423 [Clostridium symbiosum
           WAL-14163]
 gi|323694084|ref|ZP_08108263.1| hypothetical protein HMPREF9475_03126 [Clostridium symbiosum
           WAL-14673]
 gi|323401359|gb|EGA93708.1| hypothetical protein HMPREF9474_02423 [Clostridium symbiosum
           WAL-14163]
 gi|323501801|gb|EGB17684.1| hypothetical protein HMPREF9475_03126 [Clostridium symbiosum
           WAL-14673]
          Length = 321

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 22/248 (8%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA----NGDWKGFDVDFCRALSSAI 71
              S S +   L DI +RG+++            +      +G + G D++  R ++  +
Sbjct: 61  AAHSDSASGGRLADILERGYIEVATEPYFAPNEFIDPSKQGDGKYVGADIELARYIAEKL 120

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR----EISLGLAFRPITYFDGQ 127
             +    + +PL+ +     +   + D+      +T  R    E+S G  F       G 
Sbjct: 121 GVE---CRIVPLDFESVLSGISDGKYDLAISALAYTPARAEAMELSKGYYFDDEKVQYGL 177

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                    I S   L+  ++ VQ+G+  E+   +   A+             +     +
Sbjct: 178 MVRTENLDKIKSAEDLADKTLVVQSGSLQEMFANEQVPAYK---ELKRVSATTDGFLMVQ 234

Query: 188 AHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             + DA     +        ND       P     + +    + +     +G+TE    V
Sbjct: 235 EGKADAVITAKTTAELYLDANDGCGMTIVPDFSFTVDESTQGTRIGIT--KGETELLQKV 292

Query: 242 SWTHYAMV 249
           +     +V
Sbjct: 293 NEIIDEVV 300


>gi|300863898|ref|ZP_07108816.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300338084|emb|CBN53962.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 285

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 94/254 (37%), Gaps = 13/254 (5%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   ++ + LI  LFF + S   S L DI++ G LK GI      F   + + +WKG 
Sbjct: 1   MSKKLTITAISLIFPLFFPTISLAQSALQDIRQNGVLKVGIRKDAAPFGYTEGD-NWKGL 59

Query: 60  DVD--------FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            V+          + L+ ++  +  +      + + R+ ++ SK+  +            
Sbjct: 60  CVEGMEIFRASLEKQLNRSVRLEKLETVLDESSPQGRYRSITSKRAHLECGPNTINKNSP 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +  +   +            +  ++    L   +I V   + T+  +A  ++  N K 
Sbjct: 120 TGIAFSLPFLYSGTYLMVKPENRLRVNPSGFLQDLTIGVLGDSLTQQFIAGRYQLANQKV 179

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPD-IISKSPLAPA 229
           +       +         + DA   D   L    L     P+++ ++P+  ++       
Sbjct: 180 Y-QGQSGRQTAVKDAVEGKIDALASDGILLVGEALRQGLNPNQYALIPEKPLTCIAYGMI 238

Query: 230 IIQGDTEWYNIVSW 243
           +   D+EW  IV+ 
Sbjct: 239 VPANDSEWKEIVNN 252


>gi|78064768|ref|YP_367537.1| cyclohexadienyl dehydratase [Burkholderia sp. 383]
 gi|77965513|gb|ABB06893.1| cyclohexadienyl dehydratase [Burkholderia sp. 383]
          Length = 266

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 15/239 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L D+  RG L+         ++  +A+G ++G D+D   +L+ ++      ++    N
Sbjct: 35  SRLDDVLARGTLRVCTTGDYKPYSYYRADGRFEGIDIDMAESLAKSLGVKTDYVKTSWPN 94

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--- 141
               F+A    + DI       TL R+    + F      DG+  I+         +   
Sbjct: 95  LTGDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTPIVRCADADKYQTVAQ 148

Query: 142 -QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  + V  G T E     YF   N      V+     I     A + D    D S 
Sbjct: 149 IDRPETRVIVNPGGTNERFAKQYFTHAN----LTVYPDNVTIFKQILAGKADVMVTDASE 204

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              L+   +     V           A  + +GD  +   V    +  ++  E      
Sbjct: 205 TL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVAFQQYVDQWLHLALSTGEYQAISD 262


>gi|260663040|ref|ZP_05863933.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
 gi|260552661|gb|EEX25661.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum 28-3-CHN]
          Length = 287

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 73/251 (29%), Gaps = 18/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
            K   +S++ L+ +  T+   +      +  +       +  L   +          G+D
Sbjct: 6   KKLIGLSLVALVGVGLTACGKSQD--QKVADQKTWTVATSGTLYPTSYHDPKTKKLTGYD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA++  +      + +   N   +  A+++ +  +   +   +  R+    ++   
Sbjct: 64  IEVIRAVAKGLHKK---VVFKEYNVDGQLTAVKTGKAQMAVNDFAISPERKNQFLMSSPI 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              F+        + GI S + + G         T    LA    A  + Y  +     +
Sbjct: 121 KHSFNSLLVRKDDQSGIHSWADIKGKK-AAGEAGTNYQRLAQQLGAKLVNYDNV---SND 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAIIQGD 234
                 ++ + D    D                   P  + +  +          I + D
Sbjct: 177 VYLKGVQSGKTDLIMNDYYLQKLALAAYPNSGLEIDPDMYFVTNEDGKGE--GIVINKKD 234

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 235 KALQKEVNEEL 245


>gi|302874109|ref|YP_003842742.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|307689633|ref|ZP_07632079.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|302576966|gb|ADL50978.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
          Length = 298

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 84/221 (38%), Gaps = 6/221 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L  I++RG L    +   +  +       ++ G D D  + ++  I  +  +I+ +  
Sbjct: 43  DRLELIRERGVLWVCSSND-IPISFTDPKTNEFSGIDADILKEVAKRIGINKVEIKSVTP 101

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            +        +  IDI++     T  R+    + F  I Y + +  ++ K   I+S   L
Sbjct: 102 FSNLIDCLNTNADIDIIANGMYVTEDRKK--EVLFTNIWYKESEAVLIPKVSRINSKEDL 159

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
             A I    GT+    LA+ +K  N+    +++     +  A    + +A   +      
Sbjct: 160 KNAVIGALEGTSFLE-LAENWKKDNLVKDVVIYNDQNTLLCAVNEGKINAAITNSIVSTY 218

Query: 204 LKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSW 243
           L   + +    ++ P +  +   +A A+ + D      ++ 
Sbjct: 219 LLSKDSKLYLKILSPYEPETLGKIAAAVRKSDISLAKAINK 259


>gi|210624307|ref|ZP_03294311.1| hypothetical protein CLOHIR_02267 [Clostridium hiranonis DSM 13275]
 gi|210153091|gb|EEA84097.1| hypothetical protein CLOHIR_02267 [Clostridium hiranonis DSM 13275]
          Length = 268

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 76/254 (29%), Gaps = 10/254 (3%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     IL   ++  +             ++  +K          +     G+  G
Sbjct: 1   MKFGKKLLSCILVGAVVMGSLVGCGNKEASGGDEKAPIKVATAPIFPPCSYKDDEGNLAG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+ D    +          I+    +A     A+ S + D ++     T  R+ +    F
Sbjct: 61  FEHDVFEEIGKRCGRKIEWIEGDSQDALFG--AVDSGKADTIAFQISITDERKET--YDF 116

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  ++   F +        +  L G    V    +   TL  Y ++       I+   
Sbjct: 117 SEVYGYNKIFFAVRDDFDYKDLDDLQGKKANVPPVHSFYPTLEKYNESLPEDKKIIIIPS 176

Query: 179 VE-EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTE 236
               +  A    R DA    I+     +  + +P +  I  + I     A    +  D E
Sbjct: 177 DSGSMYEALEQGRYDA--CPITEAAFKEAMSKKPYKVKIAGEPIVLEENAYPFSKDADPE 234

Query: 237 WYNIVSWTHYAMVT 250
               V+    +M+ 
Sbjct: 235 LVKDVNDAIKSMLE 248


>gi|152969143|ref|YP_001334252.1| glutamine ABC transporter periplasmic-binding protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150953992|gb|ABR76022.1| glutamine ABC transporter periplasmic-binding protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 276

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 77/252 (30%), Gaps = 14/252 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +  ++ + F+  +  A  L +I+K G LK         F  +  NG   GF+ D    L 
Sbjct: 3   LSAVLTVAFSYHAVAAD-LPEIEKSGTLKVATEDDYAPFNFMN-NGQADGFNKDMLEELR 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                    +    L       A+ + Q D+       T  R       F P        
Sbjct: 61  K---YAKFHVDQSILPWTGLLAAVSTGQYDMALTGAVITDERLKV--FDFTPPWASAQHY 115

Query: 129 FIMHKKKG-ISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEID 183
           F+       +++++ LSG  + VQAG+     L +      K        + +    E  
Sbjct: 116 FVKRAGDTSLNTIADLSGKKVGVQAGSALLARLPELKAMLEKTGGKLGPVVEYPSYPEAY 175

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A     R D        +    L   +P        +     +A  I +   +    ++ 
Sbjct: 176 ADLANKRLDYVI--NVVISVNDLAKAKPKVFAKGLAVSGPGYMAWPIPKNSPQLLAYMTR 233

Query: 244 THYAMVTAEELG 255
               M    +L 
Sbjct: 234 FMNHMKETGKLA 245


>gi|300790866|ref|YP_003771157.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299800380|gb|ADJ50755.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 272

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 71/242 (29%), Gaps = 19/242 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             + +    L  T  +   S        G   L+ G  +       +  NG + G+D + 
Sbjct: 8   IAAAVTAGALTLTLAACGGS------DAGPATLRVGTLSDAPPSIYL-ENGRFTGYDNEL 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            R ++     +  +++++          +   + DI S     T  R+ ++   F     
Sbjct: 61  LRDIAKR---EGFEVEFVGTEFSSLLAGVAGGKFDIGSSTISSTEARKKTVA--FSNGYN 115

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                 +  K   +     L G  + V  G+     + D F         + F       
Sbjct: 116 TGFTTVVTAKGANLKDTGALGGKRLGVVQGS-----VQDEFAGKVAGAQVVRFPDYNAGF 170

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A  +    D +             N      +        +P A A+ + +TE  N ++ 
Sbjct: 171 AQLKNGTLDGWVVPQDIGQKYLDQNPNVPLELGYTVEDKDTPSAFAVAKKNTELLNKLND 230

Query: 244 TH 245
             
Sbjct: 231 GL 232


>gi|282857472|ref|ZP_06266704.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Pyramidobacter
           piscolens W5455]
 gi|282584691|gb|EFB90027.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Pyramidobacter
           piscolens W5455]
          Length = 247

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 73/220 (33%), Gaps = 15/220 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           ++  ++ G++    GF  +   G+ +GF+VD    ++         + +  +        
Sbjct: 15  EKASVRVGMDGSTSGFTVLNDKGELEGFEVDVWNEIAKRNGWK---VAFEQMPFSSLLGM 71

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           +   ++D ++     T  R       F     +D Q  +   +    +   L G +I + 
Sbjct: 72  IGDGRLDTVANTLAPTEKR--REIYNFSDPYLYDEQNLMSRPETEAKTFKDLDGLTIGMV 129

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALKLTND 209
            G+  E  +    K +N+K   + F+  +         + DA     +       +   D
Sbjct: 130 PGSVDEEFIDRIEKENNVKIKRVYFD--DTAMQDVVMGKIDACVQSQTIAIEAIQRFGAD 187

Query: 210 R------PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +         +       +K+P   A+ +   +    +  
Sbjct: 188 KIKVLIGGGLYFESAYPFAKTPQGDALREATNKTLKAMRE 227


>gi|213692880|ref|YP_002323466.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|213524341|gb|ACJ53088.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|320459054|dbj|BAJ69675.1| putative ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 315

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 67/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G N        + A+G    G+D+D  RA+ +    +   +     N  
Sbjct: 68  ESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVS---SNFD 124

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  R     + F           +          + L G 
Sbjct: 125 TIIPAIGS-KYDLGIAAFTITKER--MESVDFVSYFTAGMGYAVAAGNPKNVDENDLCGL 181

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ V+ GT  E  +    K               ++  +   A    + D +  D   + 
Sbjct: 182 NVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSPVVG 241

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   +   L       P A AI +GD++    V     
Sbjct: 242 YAIAQTE--GQLEQLGKDFDSVPNAIAIKKGDSQTTEAVQKAMQ 283


>gi|291453903|ref|ZP_06593293.1| probable amino acid ABC transporter, solute-binding component
           [Streptomyces albus J1074]
 gi|291356852|gb|EFE83754.1| probable amino acid ABC transporter, solute-binding component
           [Streptomyces albus J1074]
          Length = 293

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 87/262 (33%), Gaps = 21/262 (8%)

Query: 8   SILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           S+L    +  T+ +  A         S L  ++  G ++ GI    V F  +  +G++ G
Sbjct: 13  SLLAGAAVLGTAGAVGATGCSRVPEGSTLERLRSAGTVRLGIAGE-VPFGYIDESGEFTG 71

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
              +  + +   +    + +Q +          L S+Q D++S        R     + F
Sbjct: 72  EAPELAKVIFKRLG--IANVQPVATEFGSLIPGLGSQQFDVVSAGMYINKER--CGQVLF 127

Query: 119 RPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               Y     FI+ K     + +   +  +      G      +    +A   +   ++ 
Sbjct: 128 ADPEYQMLDAFIVRKGNPKNLRNYEDVVKSKAKFATG-AGYAEIGYAMEAGIAERDIVIL 186

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPL---APAIIQ 232
           +       A  + R D + G      ++   + +        P +  K  +     A   
Sbjct: 187 QDQVAGLNAVESGRVDVFAGTALTTRSVVTKSRKAETTEPFPPKVGGKEKIDGGGFAFRL 246

Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254
            DTE  + V+   + M  + EL
Sbjct: 247 NDTELRDAVNKELHKMKKSGEL 268


>gi|199597698|ref|ZP_03211126.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|258509843|ref|YP_003172594.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus
           GG]
 gi|199591505|gb|EDY99583.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|257149770|emb|CAR88743.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus GG]
          Length = 532

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 89/322 (27%), Gaps = 47/322 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---------- 49
           M K +   +  L         + A+  +         K G+  G   F            
Sbjct: 1   MRKHWVARLGVLGFALSLLLGSFAATPVSAASDDNTFKVGMEAGYAPFNWTQTTSANNAV 60

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
            ++ + ++  G+DV   R ++ A+      +  +  +      AL S +ID +      T
Sbjct: 61  KIQGSQEYANGYDVQIARKVAKALHKK---VVVVKTSWDGLPPALTSGKIDAIIAGMSPT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
              +    + F    Y      ++ K        S++   GA I  Q  T     +    
Sbjct: 118 P--DRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKITAQLSTYHYQAINQI- 174

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
               +   P        +  A  +   D Y  ++      +  N                
Sbjct: 175 --KGVVKEP-AMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKG----- 226

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL--GIDKS 282
                    DT     +                +  IN++    +  +  R +   +D  
Sbjct: 227 -QGFKTDASDTNLAIGLRK----------NDPNKAKINELLATISTKERARLMNEAVDNQ 275

Query: 283 SNIGEALGLTKDWTYRIIRHMG 304
            +  +    + +W   I++  G
Sbjct: 276 PSTEK----SGNWFMAIMKQYG 293


>gi|171315821|ref|ZP_02905052.1| Arogenate dehydratase [Burkholderia ambifaria MEX-5]
 gi|171099010|gb|EDT43795.1| Arogenate dehydratase [Burkholderia ambifaria MEX-5]
          Length = 268

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 76/237 (32%), Gaps = 15/237 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+  RG L+         ++  + +G ++G D+D   +L+ ++      ++    N  
Sbjct: 39  LDDVLARGTLRVCTTGDYKPYSYYRTDGRFEGIDIDMAESLAKSLGVKADFVKTSWSNLT 98

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS----Q 142
             F+A    + DI       TL R+    + F      DG+  I          +     
Sbjct: 99  NDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTAIARCADADKYQTVAQID 152

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T E     +F   N+     V+     I     A + D    D S   
Sbjct: 153 RPETRVIVNPGGTNERFAKQFFTHANLS----VYPDNVTIFKQILAGKADVMVTDASETL 208

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L+   +     V           A  + +GD  +   V    +  +++ E      
Sbjct: 209 -LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVAFQQYVDQWLHLALSSGEYQAISD 264


>gi|58336459|ref|YP_193044.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM]
 gi|58253776|gb|AAV42013.1| putative glutamine ABC transporter [Lactobacillus acidophilus NCFM]
          Length = 537

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 90/300 (30%), Gaps = 32/300 (10%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M   F    +++ +++  F  F+ N+ S     K  G LK G+      +          
Sbjct: 1   MKSRFRWIAALMTVLLSIFIGFNFNSHSTQAAKKDSGTLKIGMEANYPPYNWTQPTKTNG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVPIDGSNSYANGYDVQIAKIIGKRLHKK---VVVEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      +S   GA +  Q GT     +  
Sbjct: 118 PTAERRK--AINFSEPYRKSTFVVITNKASKYSNAKKLSDFKGAKLTAQQGTLHYDLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVIL 217
                  K  P        +  +  +   D Y  +     +    N        ++    
Sbjct: 176 L---KGSKREP-AMRDFSAMRQSLSSGTIDGYVAEDIEFESYHNVNPNIIAINLNKMAGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKRDQLMSQAIREQPKAGNETKNENWL 291


>gi|291571452|dbj|BAI93724.1| putative ABC transporter solute-binding protein [Arthrospira
           platensis NIES-39]
          Length = 285

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 14/256 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     V +   +   F   +   ++L DI++ G LK G+         +  + G+W+G+
Sbjct: 1   MKNIIRVFLTLTLCSLFPLNAIAGTVLEDIRRTGILKAGVRQDAAPLGYLSPDTGEWEGY 60

Query: 60  DVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            +     L+S +      + P ++Q +      R   +    + +       T  R    
Sbjct: 61  CIQLMELLASRLTQQLQLNQPVQVQLVQSTLDNRESIVADGSVHLECGPNTVT--RTPPP 118

Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           G+ +       G   ++       I+    +    I V   T T+  ++  +    +   
Sbjct: 119 GIVYSDRFIATGNHLLVAADNQTLINPDGAMENIIIGVLPNTLTQGFISSRYSLAQI-VQ 177

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILP-DIISKSPLAPA 229
                   +          +A+  D   L    L      P ++ I+P + ++       
Sbjct: 178 YHGTSGRADAVRDVLNREINAFASDGLLLIGEVLRQPDINPQDYAIIPQEPLTCEFYGMI 237

Query: 230 IIQGDTEWYNIVSWTH 245
           + +GD  W N ++   
Sbjct: 238 VPEGDIAWLNTINSLI 253


>gi|258541026|ref|YP_003175525.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152702|emb|CAR91674.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|259651105|dbj|BAI43267.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 535

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 89/322 (27%), Gaps = 47/322 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---------- 49
           M K +   +  L         + A+  +         K G+  G   F            
Sbjct: 4   MRKHWVARLGVLGFALSLLLGSFAATPVSAASDDNTFKVGMEAGYAPFNWTQTTSANNAV 63

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
            ++ + ++  G+DV   R ++ A+      +  +  +      AL S +ID +      T
Sbjct: 64  KIQGSQEYANGYDVQIARKVAKALHKK---VVVVKTSWDGLPPALTSGKIDAIIAGMSPT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
              +    + F    Y      ++ K        S++   GA I  Q  T     +    
Sbjct: 121 P--DRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKITAQLSTYHYQAINQI- 177

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
               +   P        +  A  +   D Y  ++      +  N                
Sbjct: 178 --KGVVKEP-AMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKG----- 229

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL--GIDKS 282
                    DT     +                +  IN++    +  +  R +   +D  
Sbjct: 230 -QGFKTDASDTNLAIGLRK----------NDPNKAKINELLATISTKERARLMNEAVDNQ 278

Query: 283 SNIGEALGLTKDWTYRIIRHMG 304
            +  +    + +W   I++  G
Sbjct: 279 PSTEK----SGNWFMAIMKQYG 296


>gi|302539846|ref|ZP_07292188.1| bacterial extracellular solute-binding protein, family 3
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457464|gb|EFL20557.1| bacterial extracellular solute-binding protein, family 3
           [Streptomyces himastatinicus ATCC 53653]
          Length = 317

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 90/246 (36%), Gaps = 23/246 (9%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWKGFDVDFCRALSSAIFDDPSK 77
            S  A +  D++K G L+ G + G    A       G   G D+D   A++  +      
Sbjct: 56  GSVAALLPADVRKSGTLRIGSSVGGPPNAYYPQGTGGKPAGQDIDLANAVAKVLG---VT 112

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-- 135
           ++    + +    AL S + D+ + N   T  R  +  + F      DGQGF + K    
Sbjct: 113 LKRQDASFETILPALGSGKFDVGTGNFGVTAERLKT--VDFA-TYINDGQGFAVKKGNTA 169

Query: 136 ---GISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRA 188
               ++ +++L G +I   AGTT E TL        KA    Y   V+     I  A + 
Sbjct: 170 LGGKVTDLTRLCGLTIGTGAGTTFEATLEAQKKVCAKAGKKPYEVKVYSENGAILTALQQ 229

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG---DTEWYNIVSWTH 245
            R D    ++S +  L+    + +          +  +  A  +G      +   V+   
Sbjct: 230 GRIDV---EMSTINGLRYQAAQKAAQTTFLGEYHRLDVGFAFKKGSRLTRAFQAAVNELI 286

Query: 246 YAMVTA 251
                A
Sbjct: 287 KDGTYA 292


>gi|167587515|ref|ZP_02379903.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 267

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 66/201 (32%), Gaps = 21/201 (10%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSA 70
           L +L     S  A           L+ GI+      F    A G W+G+++D    L +A
Sbjct: 16  LFVLGLVPASHAAQP--------TLRVGIDAESYPPFFSKDAGGKWQGWEIDV---LDAA 64

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 + +   +       ALQ+++ID++  +   T  R+    + F    Y     F+
Sbjct: 65  CGKLNVRCELADIAWDGLIPALQNRRIDVIWSSMTITGERQK--AIDFSRAYYESPTVFV 122

Query: 131 MHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             K               G  I V+AGT     L   FK          F++ +   A  
Sbjct: 123 GAKSDRRRVDCAVPASFKGRVIGVEAGTNFSAFLDSRFKQ---DAQIKAFDKFDNALADL 179

Query: 187 RAHRCDAYTGDISALYALKLT 207
            + R D          A   +
Sbjct: 180 VSGRVDYVQEGKGLFTAFLAS 200


>gi|170731480|ref|YP_001763427.1| arogenate dehydratase [Burkholderia cenocepacia MC0-3]
 gi|169814722|gb|ACA89305.1| Arogenate dehydratase [Burkholderia cenocepacia MC0-3]
          Length = 270

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 77/240 (32%), Gaps = 15/240 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            S L D+  RG L+         ++  +A+G ++G D+D   +L+ ++      ++    
Sbjct: 38  GSRLDDVLARGALRVCTTGDYKPYSYYRADGRFEGIDIDMAESLAKSLGVKTDYVKTSWS 97

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-- 141
           N    F+A    + DI       TL R+    + F      DG+  I+         +  
Sbjct: 98  NLTNDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTPIVRCADADKYQTVA 151

Query: 142 --QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                   + V  G T E     +F   N      VF     I     A + D    D S
Sbjct: 152 QIDRPETRVIVNPGGTNERFAKQFFTHAN----LTVFPDNVTIFKQILAGKADVMVTDAS 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               L+   +     V           A  + +GD  +   V    +  ++  E      
Sbjct: 208 ETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVAFQQYVDQWLHLALSTGEYQAISD 266


>gi|238064580|ref|ZP_04609289.1| glutamate binding protein [Micromonospora sp. ATCC 39149]
 gi|237886391|gb|EEP75219.1| glutamate binding protein [Micromonospora sp. ATCC 39149]
          Length = 381

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 96/282 (34%), Gaps = 31/282 (10%)

Query: 6   FVSILCLIILFFTSFSTNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            ++   + I+      T   +L     K R  L  G+     G ++   N  WKGFDV+ 
Sbjct: 39  VLAAALIPIVLAFGPPTRDELLERAGLKGRQQLLIGVKDDQPGVSQRFPNNVWKGFDVEI 98

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSK-----QIDILSRNTDWTLLREISLGLAF 118
              ++  +  D S++++LP+ +++R             +D++  +   T  RE   G  F
Sbjct: 99  AYMIAGYLGFDRSQVRFLPIESEDRARRQARDGDGFVTVDLVIASYSITKQREE-EGAVF 157

Query: 119 RPITYFDGQGFIMHK----KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                +  Q  I       ++ +SS+  LSG ++C    +T+   L +          PI
Sbjct: 158 SAPYLYTEQSVITLDSVGEREQVSSLEDLSGRTVCTLTTSTSAQRLRE------AGAVPI 211

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPL------- 226
              R+ +        +  A T D + L      +    +    P D     PL       
Sbjct: 212 GRNRISDCVQMLYDGKAYAVTTDAAILAGFVTGDRPDDDGQRFPVDQRGVKPLRHWDIGS 271

Query: 227 -----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
                       +    ++V    Y     EE    +   + 
Sbjct: 272 SAQEQWGVNTGPNEALRDLVDLALYDSAKDEENSTWENAYDA 313


>gi|91763207|ref|ZP_01265171.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717620|gb|EAS84271.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 255

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 19/249 (7%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             S L  I   G LK G                 +KGFD+D  + L+  +      I ++
Sbjct: 19  AESKLDQILSSGELKVGTTGDWDPMTMKDPATNKYKGFDIDVMQELAKDMGVK---ITFV 75

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG--FIMHKKKGISS 139
           P   K     + + + DI   +T  T   + +    F    Y  G     +    K  S+
Sbjct: 76  PTEWKTIVSGITAGRYDI---STSVTKTPKRAEVAGFTDSYYKYGTVPLVLKKNLKKYST 132

Query: 140 VSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              L+    +I    GT+ E    ++F    ++         +E+ AA            
Sbjct: 133 WKSLNNKDVTIATTLGTSQEEKAKEFFPLSKLQSVESPARDFQEVLAARADGNI------ 186

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-- 255
            S+  A KL    P   ++     + + LA  + + D  W + V+    +  ++      
Sbjct: 187 TSSTEANKLVVKYPQLAIVPDGEKNPAFLAMMVSKNDQVWNDYVNEWIKSKKSSGFFNKL 246

Query: 256 ITQKNINQV 264
           +T+ N+  +
Sbjct: 247 LTKYNLKSL 255


>gi|258543562|ref|YP_003188995.1| amino acid ABC transporter permease [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634640|dbj|BAI00616.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637696|dbj|BAI03665.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640750|dbj|BAI06712.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643805|dbj|BAI09760.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646860|dbj|BAI12808.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649913|dbj|BAI15854.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652903|dbj|BAI18837.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655957|dbj|BAI21884.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 519

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 81/244 (33%), Gaps = 18/244 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVK--ANGDWKGFDVDF 63
           + + C+ +L   S+    + +   ++   ++   +    V +            GF+ D 
Sbjct: 15  LFLRCVCMLLAVSWLGAGAHVAHAQEEKPIRWAADASSDVPYTFHDLKDQDKLTGFEYDL 74

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L   +    + +Q++  +       LQ    +++    + T   E + G+ F    Y
Sbjct: 75  MQELGKHMG---ASLQFVQNDWDGLIPGLQRGLYEMVICGIEMTD--EHAEGIDFSDPYY 129

Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              +  ++ +    + +++ L+G +I     T  E  L +  K          ++   + 
Sbjct: 130 ITSERIVVRRNGPQLKTLADLNGHAIGTIKDTQAERILTENAK-----VQLRTYDEETDA 184

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-EWYNIV 241
                  R DA   D     A    +  P    ++ + I +     A  +G        V
Sbjct: 185 FMDLANGRTDAILIDGPI--AKYYGDTNP-ALQVVGEPIGRVEYGIAFAKGQNAALRTKV 241

Query: 242 SWTH 245
           +   
Sbjct: 242 NAAL 245


>gi|21232966|ref|NP_638883.1| cyclohexadienyl dehydratase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66766961|ref|YP_241723.1| cyclohexadienyl dehydratase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990053|ref|YP_001902063.1| putative amino acid uptake ABC transporter,periplasmic binding
           protein [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21114807|gb|AAM42807.1| cyclohexadienyl dehydratase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66572293|gb|AAY47703.1| cyclohexadienyl dehydratase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167731813|emb|CAP49997.1| putative amino acid uptake ABC transporter,periplasmic binding
           protein [Xanthomonas campestris pv. campestris]
          Length = 256

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 6/231 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  + + G L+         ++ ++A+G ++G D+   +AL+ ++    +++Q++  +
Sbjct: 23  SRLDAVVRAGVLRVCTTGDYRPYSLLRADGQFEGSDIALAQALADSL---DARVQFVRTS 79

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
             +    L + + D+       TL R+     +                +    SV+Q++
Sbjct: 80  WPQLMHDLLADRCDLAVGGISVTLQRQRQASFSSVLDVDGKIPLVRCADQARYRSVAQIN 139

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              + V            + +    + +  +F     I    R  R D    D S     
Sbjct: 140 RPEVRVIEPPGGTN--EAFARRQLPQANLRLFADNTTIFEELRQGRADVMITDASEATFQ 197

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +              +      A  + + D  W   V    +    + +  
Sbjct: 198 QARLPGLCAVAPEQPLQYSE-KAFLLPRDDAAWKAYVDQWLHLSKASGDYA 247


>gi|107024487|ref|YP_622814.1| prephenate dehydratase [Burkholderia cenocepacia AU 1054]
 gi|116688134|ref|YP_833757.1| prephenate dehydratase [Burkholderia cenocepacia HI2424]
 gi|105894676|gb|ABF77841.1| cyclohexadienyl dehydratase [Burkholderia cenocepacia AU 1054]
 gi|116646223|gb|ABK06864.1| cyclohexadienyl dehydratase [Burkholderia cenocepacia HI2424]
          Length = 270

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 77/240 (32%), Gaps = 15/240 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            S L D+  RG L+         ++  +A+G ++G D+D   +L+ ++      ++    
Sbjct: 38  GSRLDDVLARGALRVCTTGDYKPYSYYRADGRFEGIDIDMAESLAKSLGVKTDYVKTSWS 97

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-- 141
           N    F+A    + DI       TL R+    + F      DG+  I+         +  
Sbjct: 98  NLTNDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTPIVRCADADKYQTVA 151

Query: 142 --QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                   + V  G T E     +F   N      VF     I     A + D    D S
Sbjct: 152 QIDRPETRVIVNPGGTNERFAKQFFTHAN----LTVFPDNVTIFKQILAGKADVMVTDAS 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               L+   +     V           A  + +GD  +   V    +  ++  E      
Sbjct: 208 ETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVTFQQYVDQWLHLALSTGEYQAISD 266


>gi|317182239|dbj|BAJ60023.1| ABC-type polar amino acid transport, periplasmic component
           [Helicobacter pylori F57]
          Length = 240

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 65/228 (28%), Gaps = 11/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            +S+   +  +  +  G       F      G   G+DV+  R L+  +      I++  
Sbjct: 3   ASSLYERLVNKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVK---IKFHE 59

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141
            +       L+S + D+++     T  ++            + G   ++ K    I  + 
Sbjct: 60  TSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSLPYSYSGTIMLVRKDENRIKDIK 118

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G        +T          A       +  + + +        R D       A+
Sbjct: 119 DIKGLRAANTLSSTYGEI------ASKYDAQIVSVDSMAQALLLVAQKRADLTLNSSLAI 172

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                T+      +           +  I +   +   +++     ++
Sbjct: 173 LNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLI 220


>gi|167751494|ref|ZP_02423621.1| hypothetical protein EUBSIR_02495 [Eubacterium siraeum DSM 15702]
 gi|167655302|gb|EDR99431.1| hypothetical protein EUBSIR_02495 [Eubacterium siraeum DSM 15702]
          Length = 276

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 80/250 (32%), Gaps = 13/250 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K    ++L L  +       +A     +     +  G +     +     NG+  G DV
Sbjct: 14  IKCTAAAVLSLAFILSGCSDKSAVSSDALP---VIIIG-SDEYEPYNFSDKNGNPAGIDV 69

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +     S A      K Q+  +   E+   L   ++D L          +      +   
Sbjct: 70  EIA---SEAFLRMGYKAQFKNIVWDEKDEMLADGKVDCLWGCFSMNGREDKYR---WVGP 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                Q   +     I ++S LSG  + VQ+ +  E  L+              F R E 
Sbjct: 124 YMNSRQAVAVRADSNIYALSDLSGKKVAVQSSSKPEEILSQNSADIPQVSGLYCFVRTEY 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY-NI 240
           I AA R +  DA  G    L      +D    + +L + +  S L  A  + +       
Sbjct: 184 IFAALRKNYVDAVAGHEYMLRVFINESDNK--YRLLDESLLLSKLGIAFAKDNDSALPEK 241

Query: 241 VSWTHYAMVT 250
           +  T Y M  
Sbjct: 242 LRATLYDMKN 251


>gi|330890452|gb|EGH23113.1| cyclohexadienyl dehydratase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 263

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 83/262 (31%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + +   L++          S   L  + + G L          +  ++ +G+++G
Sbjct: 1   MMNLKYSAFTALLLGMTGMAQAQESTSHLDKVLQAGQLAVCTTGDYKPYTLLREDGEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   ++ +P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VRGVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K    +V Q++  S+ +           + F   ++    + F+ 
Sbjct: 118 TLDVDGKIPLVRCEDKAMYETVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFQD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I    +  + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELQDKKADVMITDASEALYQQKRMPGLCAVNPTAYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W + V    +      E  
Sbjct: 229 DVTWKSYVDQWLHLSKATGEYQ 250


>gi|296453672|ref|YP_003660815.1| family 3 extracellular solute-binding protein [Bifidobacterium
           longum subsp. longum JDM301]
 gi|296183103|gb|ADG99984.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. longum JDM301]
          Length = 315

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 66/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G N        + A+G    G+D+D  RA+ +    +   +     N  
Sbjct: 68  ESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVS---SNFD 124

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  R     + F           +          + L G 
Sbjct: 125 TIIPAIGS-KYDLGIAAFTITKER--MESVDFVSYFTAGMGYAVATGNPKNVDENDLCGL 181

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ V+ GT  E  +    K               ++  +   A    + D +  D     
Sbjct: 182 NVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSP--V 239

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                     +   L     + P A AI +GD++    V     
Sbjct: 240 VGYAIAQTDGQLEQLGKDFDEVPNAIAIKKGDSQTTEAVQKAMQ 283


>gi|302560485|ref|ZP_07312827.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces griseoflavus Tu4000]
 gi|302478103|gb|EFL41196.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces griseoflavus Tu4000]
          Length = 304

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 79/244 (32%), Gaps = 12/244 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
             + +    +L  +K  G ++ GI    + F  +  +G   G   +  +A+   +  D  
Sbjct: 42  TAATTGGGDLLDRLKAAGVVRLGIAGE-IPFGYIGKDGRLTGEAPELAKAIFKRLGVD-- 98

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           ++Q +P         L S+Q D+++        R     + F    Y     FI+ K   
Sbjct: 99  RVQPVPTEFGSLIPGLNSQQFDVVAAGMYVNPER--CEQVIFSDPDYQMLDSFIVRKGNP 156

Query: 137 --ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + S   +         G T    +A   +A   +   ++         A  A R D +
Sbjct: 157 LGLRSYKDVVEKKAKFATG-TGYAEIAYAVEAGYKESDILIVPDQVAGLNAVEAGRVDVF 215

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAMVT 250
            G       +   + +         I+   P     A A    +T+  +  +     +  
Sbjct: 216 AGTALTTREVVKKSRKAEVTEPFKPIVDGKPHVDGGAFAFRPTETKLRDAFNAELAKLKK 275

Query: 251 AEEL 254
           + EL
Sbjct: 276 SGEL 279


>gi|313890113|ref|ZP_07823748.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121474|gb|EFR44578.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 282

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 75/251 (29%), Gaps = 14/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K +    L   +   T+ +        +    I+K+G L    +  L   +       
Sbjct: 1   MKKMYTYIALAFSMFLLTACASKKEDQGQAQWDKIEKKGELTVATSGTLFPQSFHDKKNK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV+  + +   +     K+++  +       AL S Q+D+           + +  
Sbjct: 61  LTGYDVEIIKEVGKRLG---LKVKFTEMGVDGMLSALNSSQVDM--AGYSIEKDSKNAKK 115

Query: 116 LAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +     +     I+ +       + +         A TT+ + +A  F A  + Y  +
Sbjct: 116 FLYTDAHKYSFGSMIVRQSDDSGIKLLKDLKGKKAAGASTTSYMKVAKKFGAKLVIYDNV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                +         R D    D                 V+     + S    AI  G+
Sbjct: 176 ---TNDVYLEDVANGRTDVILNDFYLQSMASKALPDIPVKVLKGVYYNPSEANFAIKLGN 232

Query: 235 TEWYNIVSWTH 245
            +    V+ T 
Sbjct: 233 EKLQKKVNKTL 243


>gi|15836013|ref|NP_300537.1| arginine periplasmic binding protein [Chlamydophila pneumoniae
           J138]
 gi|16752561|ref|NP_444823.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila pneumoniae AR39]
 gi|7189197|gb|AAF38132.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila pneumoniae AR39]
 gi|8978852|dbj|BAA98688.1| arginine periplasmic binding protein [Chlamydophila pneumoniae
           J138]
          Length = 259

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 72/250 (28%), Gaps = 18/250 (7%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K    FF + + ++ L  TS  +       I +      G N     F  V A G+  
Sbjct: 1   MIKQIGRFFRAFIFIMPLSLTSCES------KIDRNRIWIVGTNATYPPFEYVDAQGEVV 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +       ++         L L+  +ID +      T  R+  + L 
Sbjct: 55  GFDIDLAKAISEKLGKQLEVREF---AFDALILNLKKHRIDAILAGMSITPSRQKEIALL 111

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                       +  +      +     +S+ VQ GT  E  L               F+
Sbjct: 112 PYYGDEVQELMVVSKRSLETPVLPLTQHSSVAVQTGTFQEHYLL-----SQPGICVRSFD 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTE 236
              E+    R  +      + S    +             LP           + +   E
Sbjct: 167 STLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPE 226

Query: 237 WYNIVSWTHY 246
               +     
Sbjct: 227 EIQTIQQAIT 236


>gi|313905463|ref|ZP_07838827.1| extracellular solute-binding protein family 3 [Eubacterium
           cellulosolvens 6]
 gi|313469647|gb|EFR64985.1| extracellular solute-binding protein family 3 [Eubacterium
           cellulosolvens 6]
          Length = 281

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 75/226 (33%), Gaps = 16/226 (7%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI 71
                T+ +   S +  IK +G L  G+ T             +W GFD D  + +   +
Sbjct: 34  SATVVTASAQAGSDVDYIKDKGTLIVGV-TDFAPMDYKEDGADEWVGFDADLAKKVGEDL 92

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 ++++ ++   + L L +K ID++      T   E++  +        + Q  ++
Sbjct: 93  GVK---VEFVEIDWDSKILELGNKSIDVVWNGMTLTS--EVTNAMECTKAYLKNAQVVVL 147

Query: 132 HKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            K   +  +    +   S  V+ G+  E    D        ++    E         ++ 
Sbjct: 148 PKDKAEKYADKDSVKELSFAVETGSAGEEAAKD------EGFNYNSVESQANALMEVKSG 201

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             DA   D+    A+       +      ++ S+        +G  
Sbjct: 202 TSDACIIDLLMAGAMIGDGTDFANLTHTVELTSEE-YGIGCRKGSD 246


>gi|227546356|ref|ZP_03976405.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227213337|gb|EEI81209.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 324

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 66/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G N        + A+G    G+D+D  RA+ +    +   +     N  
Sbjct: 77  ESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVS---SNFD 133

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  R     + F           +          + L G 
Sbjct: 134 TIIPAIGS-KYDLGIAAFTITKER--MESVDFVSYFTAGMGYAVATGNPKNVDENDLCGL 190

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ V+ GT  E  +    K               ++  +   A    + D +  D     
Sbjct: 191 NVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSP--V 248

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                     +   L     + P A AI +GD++    V     
Sbjct: 249 VGYAIAQTDGQLEQLGKDFDEVPNAIAIKKGDSQTTEAVQKAMQ 292


>gi|291530299|emb|CBK95884.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Eubacterium siraeum 70/3]
          Length = 276

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 82/266 (30%), Gaps = 31/266 (11%)

Query: 1   MYK-------DFFVSILCLIILFFTS--------FSTNASILGDIKKRGFLKCGINTGLV 45
           M +         F+      +L             + ++  L +I        G +    
Sbjct: 1   MKRFDFKTPVKIFIKCAAAAVLSSAFILSGCSDKSAVSSDALPEI------IIG-SDEYE 53

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            +     NG+  G DV+     S A      K Q+  +   E+   L   ++D L     
Sbjct: 54  PYNFSDKNGNPAGIDVEIA---SEAFLRMGYKAQFKNIVWDEKDEMLTDGKVDCLWGCFS 110

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                +      +        Q   +     I ++S LSG  + VQ+ +  E  L+    
Sbjct: 111 MNGREDKYR---WVGPYMNSRQAVAVRADSNIYALSDLSGKRVAVQSSSKPEEMLSQKSD 167

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                     F R E I AA R +  DA  G    L      +D    + +L + +  S 
Sbjct: 168 DIPQVSGLYCFVRTEYIFAALRKNYVDAVAGHEYMLRVFINESDNK--YRLLDESLLLSK 225

Query: 226 LAPAIIQGDTE-WYNIVSWTHYAMVT 250
           L  A  + +       +  T Y M  
Sbjct: 226 LGIAFAKDNDSALSEKLRATLYDMKN 251


>gi|217422486|ref|ZP_03453989.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 576]
 gi|217394717|gb|EEC34736.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 576]
          Length = 328

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|134278236|ref|ZP_01764950.1| ABC transporter, substrate binding protein [Burkholderia
           pseudomallei 305]
 gi|134250020|gb|EBA50100.1| ABC transporter, substrate binding protein [Burkholderia
           pseudomallei 305]
          Length = 328

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|170717478|ref|YP_001783478.1| extracellular solute-binding protein [Haemophilus somnus 2336]
 gi|168825607|gb|ACA30978.1| extracellular solute-binding protein family 3 [Haemophilus somnus
           2336]
          Length = 241

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 31/259 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L   +L   +   NA           +   +      F      G+  GFD
Sbjct: 1   MKK-----LLLATMLAGATIGANAQD---------ITFAMEPSYPPFELTNEKGEIIGFD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A+   I    +   +          +L   +    +  +   +    +  +AF  
Sbjct: 47  VDIANAICKEI---QANCSFKAQAFDALIPSLIKGRGGFDAAISAIDITEARAKQVAFTD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y     FI  K K   + +++ G    VQ GTT +       K    +Y    +  ++
Sbjct: 104 SYYESSASFIALKGKADLTTAKVVG----VQNGTTYQQYANKEAK----QYQSKSYASLQ 155

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236
           +     +  R D   GD   L  +   +  P    +   +  K      L  A+ + +T 
Sbjct: 156 DAILDLKNGRIDLIFGDTDVLRDMF--DKNPELQFVGERVTDKRYFNNGLGIAVNKKNTA 213

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++    A+    E  
Sbjct: 214 LVEQLNKGISAIKANGEYQ 232


>gi|167908711|ref|ZP_02495916.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           NCTC 13177]
          Length = 328

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|119490032|ref|ZP_01622656.1| hypothetical protein L8106_20670 [Lyngbya sp. PCC 8106]
 gi|119454184|gb|EAW35336.1| hypothetical protein L8106_20670 [Lyngbya sp. PCC 8106]
          Length = 285

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 92/263 (34%), Gaps = 14/263 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +     +L L +  F    +  +  L +IK  G LK G+      F    A G+W+G+
Sbjct: 1   MIRKLAQIVLSLALSIFFPLPSFGATVLEEIKTTGILKAGVRQDAAPFGYRSATGEWEGY 60

Query: 60  DVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            +     L++ +          KI+Y+    + R   ++ K + +       T  R    
Sbjct: 61  CIALIELLATRLQEQLNLSQAIKIEYIKSTLENREQIVRDKTVHLECGPNTVT--RTPQS 118

Query: 115 GLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           G+ +       G   ++    K  I+    L   SI V   + T+  +   +       +
Sbjct: 119 GIVYSDRFLITGVYLLVRPDNKGYINPSGALENISIGVLPASLTQRFITSRYSLAQPIEY 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILP-DIISKSPLAPA 229
           P      E       + + +A+  D   L    L       +++ ++P + ++       
Sbjct: 179 P-GISGREAAVKDVLSGQINAFASDGLLLVGEVLRQPEVSKADYALVPSEPLTCEFYGMI 237

Query: 230 IIQGDTEWYNIVSWTHYAMVTAE 252
           +  GD  W N ++       + E
Sbjct: 238 LPAGDIAWLNTINSLILVQESVE 260


>gi|76817561|ref|YP_335899.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1710b]
 gi|126443870|ref|YP_001063402.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           668]
 gi|126455577|ref|YP_001076302.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1106a]
 gi|167724449|ref|ZP_02407685.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           DM98]
 gi|167828958|ref|ZP_02460429.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           9]
 gi|167850432|ref|ZP_02475940.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           B7210]
 gi|167915712|ref|ZP_02502803.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           112]
 gi|226195541|ref|ZP_03791128.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pakistan 9]
 gi|237508413|ref|ZP_04521128.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           MSHR346]
 gi|242312491|ref|ZP_04811508.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1106b]
 gi|254185032|ref|ZP_04891621.1| ABC transporter, substrate-binding protein [Burkholderia
           pseudomallei 1655]
 gi|254186264|ref|ZP_04892782.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254194102|ref|ZP_04900534.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei S13]
 gi|254264841|ref|ZP_04955706.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1710a]
 gi|254301313|ref|ZP_04968757.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 406e]
 gi|76582034|gb|ABA51508.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1710b]
 gi|126223361|gb|ABN86866.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           668]
 gi|126229345|gb|ABN92758.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1106a]
 gi|157810735|gb|EDO87905.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 406e]
 gi|157933950|gb|EDO89620.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pasteur 52237]
 gi|169650853|gb|EDS83546.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei S13]
 gi|184215624|gb|EDU12605.1| ABC transporter, substrate-binding protein [Burkholderia
           pseudomallei 1655]
 gi|225932026|gb|EEH28026.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei Pakistan 9]
 gi|235000618|gb|EEP50042.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           MSHR346]
 gi|242135730|gb|EES22133.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia pseudomallei 1106b]
 gi|254215843|gb|EET05228.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1710a]
          Length = 328

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|157825331|ref|YP_001493051.1| amino acid ABC transporter substrate-binding protein [Rickettsia
           akari str. Hartford]
 gi|157799289|gb|ABV74543.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           akari str. Hartford]
          Length = 241

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 60/210 (28%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +                 L  G       +  ++ +G+  G D
Sbjct: 1   MK---FLKIFLLSFLLVSCNKKETD--------KTLIVGTAADNPPYEFIQ-DGEIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      +     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAISERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSITPERAEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I +   L    + VQ G+  E    D   +  M           
Sbjct: 104 HYATARFAIIYRTGDNIKNSKDLENKIVGVQLGSVLEKKAQDL--SQTMNIKVHSLANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKARVIDAIISEEFQGKKLKENNSN 191


>gi|295398454|ref|ZP_06808493.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
 gi|294973318|gb|EFG49106.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
          Length = 514

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 88/266 (33%), Gaps = 33/266 (12%)

Query: 4   DFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLVGF 47
           +  V +  LI L   + S +AS                 L +I++RG L+ G  +G   +
Sbjct: 19  NLMVILAILISLVVPAKSVSASSWTGPEAAAEVEGEDTLLSEIQERGVLRMGTASGYSPY 78

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                     +  G DV     ++  +  +   +    +       +L++  ID++    
Sbjct: 79  EFTVLRDGQNEVVGIDVFLGEYIADQLGVELEVVD---MEFGSLIASLETGGIDMIIAGM 135

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVSQLSGASICVQAGTTTELTL 160
             T  R+    + F       GQ  ++ + +       +  +    +I V   T  E  +
Sbjct: 136 GATEERD--QSIDFSNAYELSGQSIVIREGEEDEIVDYTSFENGAHTIAVSEATLQEGYV 193

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPD 219
            D+F+        ++  +  +  AA  + + D    D +   A    N+  +     L  
Sbjct: 194 RDFFE----NPDLLIMRKSGDAIAALISGQADGVLLDDTVAGANAAENEGLTVIDSNLDG 249

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTH 245
           ++     +  I +        ++   
Sbjct: 250 MVEDQGKSIGIPENQPSLQTAINDIL 275


>gi|167820599|ref|ZP_02452279.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 91]
          Length = 328

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|159030704|emb|CAO88377.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 285

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 12/252 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++++ L  +F T  + + ++L  IK+ G L+  +    + F    +N + +G  +D
Sbjct: 2   KLIILTLVILSNVFATLPAKSETVLEKIKRTGLLEVAMREDAIPFGYRDSNNNLQGLCLD 61

Query: 63  FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F + L   +          ++        RF  L++K +D           + I  G++F
Sbjct: 62  FIQLLREELKHKLNLQIISVKIYKSTLFNRFQLLENKTVDFECGPNSI--RKNIPDGVSF 119

Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               +  G  F++    +   +  S L G SI V   TTT+  L   +     +      
Sbjct: 120 SRPFFVTGTQFLVRSDNQNNFNFSSSLEGISIGVLRDTTTQELLRQKYPLATYQ-EFQGV 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILP-DIISKSPLAPAIIQG 233
                   + R +R DA+  D   L      L      ++ ++P + ++       +   
Sbjct: 179 TGRLRGIQSLRRNRIDAFASDGILLIGEAVILGLSLEQDYQLIPRNPLNCDYYGFILPAN 238

Query: 234 DTEWYNIVSWTH 245
           D +W   ++   
Sbjct: 239 DLQWQEFINGVI 250


>gi|317403435|gb|EFV83947.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans
           C54]
          Length = 250

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 80/249 (32%), Gaps = 23/249 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M   F   ++ +     T+ +  A           LK G       F  +       +G 
Sbjct: 1   MK--FKTLVVSVFAALSTATAAQAQT--------VLKVGSTPTGSPFTFLDTKTNSIEGV 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  +A+      +   +Q  P+       +L SK+IDI+S     T  R     ++F 
Sbjct: 51  MVDIVKAVGKEAGFE---VQIEPMAFSALIGSLTSKRIDIVSAAMFITPQR--QQVVSFS 105

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+G ++ K       S + + G ++ VQ GT     +        +     +++
Sbjct: 106 EPVYRYGEGLMVPKSDNKEYKSFADMKGMTVGVQVGTAFVEPIQ----KSGVFKEVKLYD 161

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236
              ++     A R      D      +    + P+ +            L  A  + DT 
Sbjct: 162 NPPDMMRDANAGRIQGGFMDYPIAAYILTQGNYPNLKMAQSYQPTVMGSLGLATRKDDTA 221

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 222 LLERINKAL 230


>gi|306823390|ref|ZP_07456765.1| ABC superfamily ATP binding cassette transporter, solute-binding
           protein [Bifidobacterium dentium ATCC 27679]
 gi|304553097|gb|EFM41009.1| ABC superfamily ATP binding cassette transporter, solute-binding
           protein [Bifidobacterium dentium ATCC 27679]
          Length = 331

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G++T       +  +G    GFDVD  +AL++    +         N  
Sbjct: 83  DSVTKDGKLSIGMDTSYAPAEFLAEDGKTPVGFDVDIAKALANIFGLEADP---ETSNFD 139

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + DI   +   T  R     + F  +        +          S L G 
Sbjct: 140 SIIPSVGS-KYDIGISSFTITKER--MEAVDFVSMFKAGSTWVVKKGNPNKVDTSSLCGL 196

Query: 147 SICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            I VQ GTT E  + +               +  +   ++       + D +  D     
Sbjct: 197 KIAVQTGTTQEEEVNEAQEQCKADGKQDIQILSNKLQTDVTTNVATGKADVFYADSPVAG 256

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 +   E +     ++K   A AI +GD++    V     
Sbjct: 257 YAIAQTEDTLEALGEDVGVTKE--AVAIKKGDSDTAKAVQAALQ 298


>gi|323260376|gb|EGA43992.1| hypothetical protein SEEM8284_20503 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
          Length = 211

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 65/216 (30%), Gaps = 13/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+  + L +      S  A    +IK+   L+ G+       A         GFD
Sbjct: 1   MKKVYFMFFILLSLSSIY--SAMAKPWQEIKESKELRVGVPGDYAPLAFHNRQNKLIGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   +L  A+      I ++P +       L + + DI       T  R     L+   
Sbjct: 59  IDMAYSLGKAL---HLNILFVPSSWSTLSADLAADKFDIAMGGVTETPGRRKQFALSSPV 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           +          ++     S+  +   G  I V  G T +  +  + +        I    
Sbjct: 116 LKNGKIALTQCNRINDFKSLGDIDRKGVRIVVNPGGTNQDYVDKHIR----YADVIHERD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +      R    D    D   L      N  P   
Sbjct: 172 NDATLQRIRERSADVMFTD--LLEGTYYQNKEPGVF 205


>gi|255525599|ref|ZP_05392533.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296185486|ref|ZP_06853896.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
 gi|255510689|gb|EET86995.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296050320|gb|EFG89744.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
          Length = 279

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 88/257 (34%), Gaps = 15/257 (5%)

Query: 1   MY--KDFFVSILCLIILF--FTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANG 54
           M   K      +C  ++F      ST        + +G   +     +  V  + V  NG
Sbjct: 1   MKNIKKILSFAVCACMIFGMTACGSTKNDSQKKEETKGPAKIIVASGSSSVPNSYV-ENG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             KG +VD   A+S+       K++++  +    F  L S + D +         R+   
Sbjct: 60  VHKGHEVDIWNAISAKTG---IKVEFVTGDFDTLFGYLDSGKADTVGNTITINAKRQA-- 114

Query: 115 GLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F     +  +  ++H     I  +  +SG +    +G+          K   +    
Sbjct: 115 KYDFSEPYAYIPEKLVVHSDKTNIKKLKDISGMTCGFSSGSNGGNLFQQIAKEQGINIKL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + ++  + ++ A+R  + DA     SA        +   +  ++ + ++    A   ++G
Sbjct: 175 VTYDSSDLLNEAFRQGKVDAMI--YSAGEVAYKIKNHILDARMVEEDVTVGAKAYPFVKG 232

Query: 234 DTEWYNIVSWTHYAMVT 250
           +     +      A+  
Sbjct: 233 NANSEKLNKAVTKAIQE 249


>gi|322420769|ref|YP_004199992.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter sp. M18]
 gi|320127156|gb|ADW14716.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter sp. M18]
          Length = 605

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 83/257 (32%), Gaps = 29/257 (11%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  +  +G   G++VD  RA++  +     ++Q+   N  E    LQ 
Sbjct: 61  TIVVGGDRAYPPYEFIDKDGKPAGYNVDLTRAIAEVMG---MQVQFRFGNWSEVRAGLQD 117

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
             IDIL      +   +    + F P            ++   + S+ +L G  + V   
Sbjct: 118 GSIDILQG---ISYSAQRLKSVDFSPPHTIVHHAIFARRETRPVKSLEELRGRKVLVFR- 173

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPS 212
              +  + +  K        ++     E      +  CD A    +  +Y ++    R S
Sbjct: 174 ---DGIMHERLKQLGFARDLVLTPTPAEALRLLASGECDYAVVAQLPGMYLIREL--RLS 228

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
             V +   +       A+ +G+ E     +     ++   +                   
Sbjct: 229 NLVPVAKAVVSEQYCYAVDRGNKELLARFNEGLAIVIKTGQYA---------------QI 273

Query: 273 VQRFLGIDKSSNIGEAL 289
             R+LG++    +   L
Sbjct: 274 YNRWLGVNDPPRVTREL 290


>gi|146343514|ref|YP_001208562.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bradyrhizobium sp. ORS278]
 gi|146196320|emb|CAL80347.1| putative ABC transporter, periplasmic amino acid-binding protein
           [Bradyrhizobium sp. ORS278]
          Length = 296

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 64/219 (29%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F     +G+  GF+VD  RA+   I              +    A+ S
Sbjct: 66  VIRFLTETDYPPFNFTGPDGNPAGFNVDLARAICDEI---KVTCTVQMRRFETLIDAVTS 122

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQA 152
            + D +  +   T        L F    Y     F+  +   ++ +    L G  I   A
Sbjct: 123 NRGDAIIASMAVTPQMRA--RLDFSDPYYRAPARFVSRRDGVMAEIRPELLEGKKIGAVA 180

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  L   F           +   + +  A R    D   GD  +L       D   
Sbjct: 181 GTAHEAYLKAMF----TDAEIKPYPNDDALRLALRRGEVDLIFGDGISLAFWVNGTDSAD 236

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +   + +G+      ++W  +
Sbjct: 237 CCAFSGGPFVESRYFGEGVGIGVRKGNDLLRQALNWALF 275


>gi|118590775|ref|ZP_01548176.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Stappia aggregata IAM 12614]
 gi|118436751|gb|EAV43391.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Stappia aggregata IAM 12614]
          Length = 266

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 63/241 (26%), Gaps = 14/241 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M        + +  L     S  A  L D+  R  +             V    G+  G+
Sbjct: 1   MKNTVLTLAVAVSSLIGAGVSALADNLPDLGGRDVV-IATENTYPPLQFVDPKSGEAIGW 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D    ++  +      + +   +      A+ + + DI           + +  + F 
Sbjct: 60  EYDAVAEIAKRL---NLNVTFQNTSWDAMIPAISAGEYDIAMNGITI--RADRAEQVDFS 114

Query: 120 PITYFDGQGFIMHK----KKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPI 174
                     ++             +  S      Q GTT   +T+ +            
Sbjct: 115 NPYMRSEMFMLVRAGEDRFTDAKGFAANSDFLAGAQPGTTPFYVTVYEVLDGDEANPRIK 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +FE       A +A   D    D +       T   P    ++ D +          +G 
Sbjct: 175 LFETFGAAVQALKAGDVDLVLTDSTGGQGYVST--NPDTFKLIGDPMGSEDFGFIFPKGS 232

Query: 235 T 235
            
Sbjct: 233 D 233


>gi|187477186|ref|YP_785210.1| amino acid ABC transporter solute-binding protein [Bordetella avium
           197N]
 gi|115421772|emb|CAJ48283.1| amino acid ABC transporter, solute-binding protein [Bordetella
           avium 197N]
          Length = 284

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 84/288 (29%), Gaps = 19/288 (6%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M        I    +L   +  T A           L+  ++      A  + +G  +GF
Sbjct: 3   MINSVLRRCIFTGALLMAFAGQTPAQTPP-------LRTAVDATFAPHAMTRLDGGVQGF 55

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD  R ++  +  D   +             L S++ D L      T  R     L F 
Sbjct: 56  NVDLGREIAKRLGRD---LTIEAAEFSGLVPGLNSRRYDFLIAPVTVTPERAR--SLLFT 110

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +     F+  K    ++S+ QL G  + V  G+  E    D    +  +Y    +  
Sbjct: 111 EGYFDTDYTFLGRKDAPPLTSLEQLKGKVLAVNKGSNYESWARDNAGKYGFRYDV--YGG 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +   A +A R D      +         +R                A A  + D E  
Sbjct: 169 NADAVQAVQAGRADYNLAGATV-AGWAAKQNRRLATSYTIKTGLV--WALAFRKDDKEGR 225

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
             VS     M     +    +     + D  N  V+   G       G
Sbjct: 226 QQVSNVIKCMKQDGTIAKLAETWFGFAPDADNSAVRIAPGTGVPDTEG 273


>gi|330815056|ref|YP_004358761.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           gladioli BSR3]
 gi|327367449|gb|AEA58805.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia
           gladioli BSR3]
          Length = 269

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 78/246 (31%), Gaps = 19/246 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F   L        + +  A+   +      L+ G+      F    A+G  +GFD+D   
Sbjct: 12  FACALGATAAMTLTGAARAADAQN------LRFGVEAQYAPFESKAADGSLQGFDIDVGN 65

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+      D    +++  +      ALQ ++ D ++   + T  R     +AF  I Y  
Sbjct: 66  AVCRIAKLD---CKWVETSFDGLIPALQGRKFDAINSAMNATPQR--RQAIAFTTIIYRV 120

Query: 126 GQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               I     G+  +   L G  I V  G+  E     ++   N     + ++   ++ A
Sbjct: 121 PTQLIARASSGLQPTPESLKGKRIGVLQGSIQETYANAHWA--NADVSIVPYQDQNQVYA 178

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYN 239
              + R D       A     L+         +   +         +   + +GD     
Sbjct: 179 DLVSGRLDGTLVLAPAGQRGFLSRPDGKGFAFVGAPVRDDRILGDGIGFGLRKGDAALKA 238

Query: 240 IVSWTH 245
            +    
Sbjct: 239 RLDAAI 244


>gi|317178710|dbj|BAJ56498.1| ABC-type polar amino acid transport, periplasmic component
           [Helicobacter pylori F30]
          Length = 240

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 65/228 (28%), Gaps = 11/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            +S+   +  +  +  G       F      G   G+DV+  R L+  +      I++  
Sbjct: 3   ASSLYERLVNKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVK---IKFHE 59

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141
            +       L+S + D+++     T  ++            + G   ++ K    I  + 
Sbjct: 60  TSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSLPYSYSGTIMLVRKDENRIKDIK 118

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G        +T          A       +  + + +        R D       A+
Sbjct: 119 DIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSMAQALLLVAQKRADLTLNSSLAI 172

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                T+      +           +  I +   +   +++     ++
Sbjct: 173 LNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLI 220


>gi|308175101|ref|YP_003921806.1| cystine ABC transporter binding protein [Bacillus amyloliquefaciens
           DSM 7]
 gi|307607965|emb|CBI44336.1| cystine ABC transporter (binding protein) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 269

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 3/167 (1%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G  T     A +   G+  G+D++  +A+   +     K  +  ++      +L +
Sbjct: 34  TVIVGTGTDFPNIAFMDEKGELTGYDIEVMKAIDKQL--PQYKFVFKTMDFSNLLTSLGN 91

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ID+++ N      RE        P  Y      +      I ++  L G ++ V A +
Sbjct: 92  RKIDVIAHNMAKNKEREKRFLYHKIPYNYSPMYITVKADNAAIHTLRDLKGKTVIVGATS 151

Query: 155 TTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYTGDISA 200
                +  Y KAH    H     +   +        R DA      A
Sbjct: 152 NAADYMTAYNKAHGSPIHLKYAGQGSNDTANQIETGRADATVSTPFA 198


>gi|167743410|ref|ZP_02416184.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           14]
          Length = 328

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|237736503|ref|ZP_04566984.1| glutamine-binding protein/glutamine transport system permease
           [Fusobacterium mortiferum ATCC 9817]
 gi|229421545|gb|EEO36592.1| glutamine-binding protein/glutamine transport system permease
           [Fusobacterium mortiferum ATCC 9817]
          Length = 250

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 67/212 (31%), Gaps = 21/212 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     I  ++     +            +    K   +     F    +  +  G
Sbjct: 1   MKIYKKLLSIIFLILSFNLLA------------QEKVYKIATDINFPPFQYRNSKNELIG 48

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D++   A++    +   K + L L  +    AL + ++D++      T  R+      F
Sbjct: 49  IDIELLEAIAK---NQNFKYEILELGFQGAINALNNGEVDVIFSVMTITDKRKE--KYDF 103

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 +G    + +   I+S   L G ++ ++ GT     ++     +N   + +  + 
Sbjct: 104 SNPYVKNGIALAVKEDSDITSYEDLKGKTVTIRTGTVGHDFVSKISDKYNF--YLVHLDD 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
              +      +  DA   D   +       ++
Sbjct: 162 DLNLVEDVVNNMSDACFEDSIYIRYNISKGEK 193


>gi|154687485|ref|YP_001422646.1| YtmJ [Bacillus amyloliquefaciens FZB42]
 gi|154353336|gb|ABS75415.1| YtmJ [Bacillus amyloliquefaciens FZB42]
          Length = 238

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 3/167 (1%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G  T     A +   G+  G+D++  +A+   +     K  +  ++      +L +
Sbjct: 3   TVIVGTGTDFPNIAFMDEKGELTGYDIEVMKAIDKQL--PQYKFVFKTMDFSNLLTSLGN 60

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ID+++ N      RE        P  Y      +      I ++  L G ++ V A +
Sbjct: 61  RKIDVIAHNMAKNKEREKRFLYHKIPYNYSPMYITVKADNDAIHTLRDLKGKTVIVGATS 120

Query: 155 TTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYTGDISA 200
                +  Y K H    H     +   +        R DA      A
Sbjct: 121 NAADYMTAYNKTHGSPIHLKYAGQGSSDTANQMETGRADATVSTPFA 167


>gi|84574977|emb|CAJ55343.1| periplasmic histidine-binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium]
          Length = 164

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 8/148 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 24  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L G  + V  G
Sbjct: 81  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEE 181
           TT E    +++    +    + ++  ++
Sbjct: 139 TTQETFGNEHWAPKGI--EIVSYQGQDQ 164


>gi|299821269|ref|ZP_07053157.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Listeria grayi DSM 20601]
 gi|299816934|gb|EFI84170.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Listeria grayi DSM 20601]
          Length = 265

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 87/250 (34%), Gaps = 8/250 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L++   T+ S   +    ++    +  G  T       +  NG   G+D
Sbjct: 1   MKKKLISILAVLLLTVLTACSNADASDKKVQ---TITVGTGTQFPNICFIDKNGKLTGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R +   +     K ++  ++     ++L S+++D+++   +    R          
Sbjct: 58  VELIREIDKRL--PNYKFKFKTMDFSNLLVSLGSQKVDMVAHQMEKNKERAQKFLFNDVA 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-V 179
              F  Q  ++   K I S+  L+G  +   A +     L    + +  K+      +  
Sbjct: 116 YNVFPIQLTVLANNKTIKSIDDLAGKRVITSATSNEATFLKKVNEENGNKFKIAYAGQGS 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R DA     +             +  ++ D++S + +     + +T+   
Sbjct: 176 NDTANQLKTGRADATIS--TPFAVDFQNKTSDIKEKVVGDVLSNAKVYFMFHKKETKLSK 233

Query: 240 IVSWTHYAMV 249
            V     +++
Sbjct: 234 DVDKALQSII 243


>gi|257868425|ref|ZP_05648078.1| L-cystine-binding protein tcyK [Enterococcus gallinarum EG2]
 gi|257802589|gb|EEV31411.1| L-cystine-binding protein tcyK [Enterococcus gallinarum EG2]
          Length = 270

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 88/276 (31%), Gaps = 14/276 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    +I  + +L   +  S++A            +K G     + +A +  NG++ G
Sbjct: 1   MKKTILGAITLVTLLVLGACGSSSADTASSGASDATEIKVGTGNEALPYAYLDENGEYDG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-EISLGLA 117
           +DV   +A+   + D      +   +       L+S ++ + +   +    R E  +   
Sbjct: 61  YDVAVVKAIDEKLLD--YTFTFEGADFPTTLSNLESNKVQMAAYEYEVNDERKEKFVYGD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              + +               S   L+G  + V   T        Y   +   +  +  E
Sbjct: 119 VGYVVWDTYIVSDSDAGTVYDSFEDLAGKKVYVTTATNQAAMAEAYLAENPDAFELVYGE 178

Query: 178 RVEE-IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E I  A  +   DA       +     +     E    P + +         + D +
Sbjct: 179 YNNEQIVQAVTSGAVDATLAPEYQVDNWNNSFSENLEIGSEP-VHNSDAYLLFNKEADQD 237

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           + + V+         EEL      I ++S+   + D
Sbjct: 238 FIDAVNTAL------EELKADG-TIKELSEKYLDGD 266


>gi|70733198|ref|YP_262971.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68347497|gb|AAY95103.1| amino acid ABC transporter, periplasmic amino acid-binding protein,
           putative [Pseudomonas fluorescens Pf-5]
          Length = 261

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 75/231 (32%), Gaps = 15/231 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            S    A ++ DI  RG L+  +      F     +G   GF+V+  + L+S +     +
Sbjct: 14  ASTCAQAELMDDINDRGELRIALEADTPPFNFKD-DGKLTGFEVELGQLLASEL---DVR 69

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-- 135
             ++   A E    ++S + D+   +   T   E+     F     +     I+ K++  
Sbjct: 70  ADFVVTEAAELLPGVESGKFDVAINHIAMTP--ELKDRFDFSEPYSYSSAQLIVRKEEQR 127

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + S+  L G ++ V  G+                 +   +   ++        + DA  
Sbjct: 128 PLFSLQALRGQALGVAQGSQFVDQARTV-----EGINLRSYADAQQPIKDVADKQIDAAI 182

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            D   +      +  P        +     LA    +G+  +   +     
Sbjct: 183 SDRLLIPYAIRDSRLPV--KEGAKVGPTLSLAIPFQKGNPAFRASLDSALQ 231


>gi|53716335|ref|YP_106256.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 23344]
 gi|121598012|ref|YP_991274.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei SAVP1]
 gi|124382142|ref|YP_001025685.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10229]
 gi|126447134|ref|YP_001077761.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10247]
 gi|166999447|ref|ZP_02265286.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei PRL-20]
 gi|238563032|ref|ZP_00439483.2| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei GB8 horse 4]
 gi|254176578|ref|ZP_04883236.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 10399]
 gi|254205109|ref|ZP_04911462.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei JHU]
 gi|254359234|ref|ZP_04975506.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei 2002721280]
 gi|52422305|gb|AAU45875.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 23344]
 gi|121225810|gb|ABM49341.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei SAVP1]
 gi|126239988|gb|ABO03100.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei NCTC 10247]
 gi|147754695|gb|EDK61759.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei JHU]
 gi|148028421|gb|EDK86381.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei 2002721280]
 gi|160697620|gb|EDP87590.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 10399]
 gi|238521452|gb|EEP84903.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei GB8 horse 4]
 gi|243064509|gb|EES46695.1| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei PRL-20]
 gi|261826671|gb|ABN00154.2| bacterial extracellular solute-binding protein, family 3
           [Burkholderia mallei NCTC 10229]
          Length = 328

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|326773224|ref|ZP_08232507.1| ABC-type amino acid transport system, secreted component
           [Actinomyces viscosus C505]
 gi|326636454|gb|EGE37357.1| ABC-type amino acid transport system, secreted component
           [Actinomyces viscosus C505]
          Length = 306

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 11/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L    +T       +  +G   G+DVD   A+++ +         +     +  +A
Sbjct: 60  EDGVLDVAASTDYAPAEFLDPSGTAVGYDVDLTNAIAAVLGVKGK----VHTAEFDSIIA 115

Query: 92  LQSKQIDILSRNTDWTLLREISLGLA-FRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
               + D    +   T  R   + +  +  +           K    S   +L G +I V
Sbjct: 116 SIGSKYDAGISSFTVTPERTAEVDMTAYINVGSRFNVQAGNPKGVETSDHLKLCGRTIGV 175

Query: 151 QAGTTTELTLADYFKAHNMKYHPI----VFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           Q GT  E T+ D          P+     + +  E          DA T   S +    +
Sbjct: 176 QVGTAQETTMRDAADKCAQAGKPVLSVRSYSKQSEATTGLVGGTIDA-TYSDSTVAGYAV 234

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 + V L +I   +P      + D ++   +     
Sbjct: 235 ELTDG-QIVTLGEIEDAAPQGVVTAKADPQFTAAIQAAVQ 273


>gi|330468469|ref|YP_004406212.1| extracellular solute-binding protein family 3 [Verrucosispora maris
           AB-18-032]
 gi|328811440|gb|AEB45612.1| extracellular solute-binding protein family 3 [Verrucosispora maris
           AB-18-032]
          Length = 286

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 80/238 (33%), Gaps = 14/238 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +    +  +  A    ++ + G L+ G  T       +  +G + GFD D   A +  + 
Sbjct: 24  LTACGSDSAGEADNPYNLLQPGVLRAGTLTDAPPNVYL-KDGKFTGFDNDLLVAAADKLG 82

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
               K++++  +       + +++ D    ++  T+       + F     F   G  + 
Sbjct: 83  ---LKVEFVGTDFSGLLAQVNNRKFD--IGSSSITITEARKKTVDFGNGYDFGYLGLNVP 137

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               +SS  +L+G  + V  GT  +        A      P+            +A   D
Sbjct: 138 AGSTLSSFDELAGKRVVVVQGTVQDDY------ATTKGLDPVRVPDYNSALNQLKAGTAD 191

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A+          K   D   +  +    +S +P A A  +G+      ++     ++ 
Sbjct: 192 AWISPAEI--GEKTAADSGGKITVAAKELSPAPTAYAFAKGNDALREALNKALDEVIA 247


>gi|323141717|ref|ZP_08076591.1| ABC transporter, substrate-binding protein, family 3
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413792|gb|EFY04637.1| ABC transporter, substrate-binding protein, family 3
           [Phascolarctobacterium sp. YIT 12067]
          Length = 288

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 87/277 (31%), Gaps = 33/277 (11%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKAN------- 53
           K F  + LC  ++   + +            G   LK G+      +   + +       
Sbjct: 10  KKFLKAALCGAMVVAMAVTAGCGGGDKKADSGKKVLKVGMECAYAPYNWSQPSADGGAVK 69

Query: 54  ----GDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                ++  G+DV   + L+ ++  D   ++   +       A+ S +ID        T 
Sbjct: 70  IAGSNEYAYGYDVMIAKKLADSMGAD---LEIHKIEWDGLAPAVVSGKIDAAIAGMSITS 126

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFK 165
            R+    + F    Y+     ++ K        SV+ L G+    Q  T     +     
Sbjct: 127 KRKE--SVDFTKPYYYATVVALVKKDSPQAQAKSVADLKGSIATSQLNTIWYDQIDQVPD 184

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPD 219
              +       + V  +  A ++ +C+    DI    A    N        P +      
Sbjct: 185 VKKLP----AIDNVPGMIVALKSGKCNLIVTDIPTAKAAAFANPDLTMVTFPEDKGFKTS 240

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
                 +  AI +G+ E  + ++     M  A+   I
Sbjct: 241 KEDVE-IGIAIKKGNKELADAMNKVLSGMTEADFNKI 276


>gi|222480216|ref|YP_002566453.1| extracellular solute-binding protein family 3 [Halorubrum
           lacusprofundi ATCC 49239]
 gi|222453118|gb|ACM57383.1| extracellular solute-binding protein family 3 [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 267

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 69/247 (27%), Gaps = 20/247 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                   + +        +            +  G   G   F     +G+  GFD+D 
Sbjct: 16  KLTGGASAVGLTGVAGCLGDGG------DSTTITPGTAPGFPPFEMQ-EDGELVGFDIDL 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLAL-QSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             A+      +    ++          AL Q+++ID+++     T   +    +AF    
Sbjct: 69  LEAVVDE--TEYELGEWATFEFDSLIPALTQNEEIDVIAAAMTITE--DRQETIAFSDPY 124

Query: 123 YFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFER 178
           +   Q  ++ +             G S+  Q+GTT    +           +     +  
Sbjct: 125 WESDQAILVREGGDFQPSAWEDFEGVSVGAQSGTTGADQVQSNLVDPGLVAEDDYRTYGS 184

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                        DA   D+              +  I     +       + QG++E+ 
Sbjct: 185 YVLAVEDLENENIDAVVIDLPVAETFAAN----RDVEIAFIEETGEQFGFGLRQGESEFQ 240

Query: 239 NIVSWTH 245
           + ++   
Sbjct: 241 SALNDGL 247


>gi|254975772|ref|ZP_05272244.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-66c26]
 gi|255093159|ref|ZP_05322637.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile CIP 107932]
 gi|255314901|ref|ZP_05356484.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-76w55]
 gi|255517575|ref|ZP_05385251.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-97b34]
 gi|255650686|ref|ZP_05397588.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-37x79]
 gi|260683773|ref|YP_003215058.1| putative amino-acid ABC transporter substrate-binding protein
           [Clostridium difficile CD196]
 gi|260687433|ref|YP_003218567.1| putative amino-acid ABC transporter substrate-binding protein
           [Clostridium difficile R20291]
 gi|306520611|ref|ZP_07406958.1| putative amino-acid ABC transporter, substrate-binding protein
           [Clostridium difficile QCD-32g58]
 gi|260209936|emb|CBA63908.1| probable amino-acid ABC transporter, substrate-binding protein
           [Clostridium difficile CD196]
 gi|260213450|emb|CBE05125.1| probable amino-acid ABC transporter, substrate-binding protein
           [Clostridium difficile R20291]
          Length = 265

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 95/288 (32%), Gaps = 27/288 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            ++    ++ ++ L F     +     ++K    +    +     ++ V  NG+ KGF+V
Sbjct: 3   KRNIIKCLVAVLSLTFVVAGCSKK--EEVKDEKVITVASSNSADPYSYVD-NGEHKGFEV 59

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + +          I+  P      F  L S ++D+ +        +E          
Sbjct: 60  DMWKEIGKRSGYK---IKMEPTGFSSIFGMLDSGKVDVAANFFGM--SKERLEKYDASIP 114

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              D     +      I+ +  L G  + V  G+  +   A   K +  +     +    
Sbjct: 115 YGSDSVCIAVKDGNNEINKLEDLKGKVVAVSEGSQGQQVAASVNKDNLFEEKV--YGDGT 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R  A+      +       +   +  +L + +S + +A    + D +   I
Sbjct: 173 NGLQDLDLGRVSAWIDAELTVVGDAKKAN--MKVRVLDEKLSVTNIAYFFKKNDEKSKTI 230

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSNIGE 287
               + A             I ++  D T   + +++ G+D S++I +
Sbjct: 231 KEDVNKA-------------IEEMLSDGTVKKISEKWFGMDVSADIQK 265


>gi|23465744|ref|NP_696347.1| ABC transporter solute-binding protein [Bifidobacterium longum
           NCC2705]
 gi|239622359|ref|ZP_04665390.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|322688639|ref|YP_004208373.1| ABC transporter substrate-binding protein [Bifidobacterium longum
           subsp. infantis 157F]
 gi|23326429|gb|AAN24983.1| probable solute binding protein of ABC transporter system
           [Bifidobacterium longum NCC2705]
 gi|239514356|gb|EEQ54223.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|320459975|dbj|BAJ70595.1| putative ABC transporter substrate binding component
           [Bifidobacterium longum subsp. infantis 157F]
          Length = 313

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 66/224 (29%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G L  G N        + A+G    G+D+D  RA+ +    +   +     N  
Sbjct: 66  ESVTKDGKLTIGTNPSYAPAEFLDADGKTQIGYDMDLARAMGNIFGLETEIVS---SNFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               A+ S + D+       T  R     + F           +          + L G 
Sbjct: 123 TIIPAIGS-KYDLGIAAFTITKER--MESVDFVSYFTAGMGYAVATGNPKNVDENDLCGL 179

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ V+ GT  E  +    K               ++  +   A    + D +  D     
Sbjct: 180 NVAVETGTVEEEAINKTAKQCKADGKKDITIQSSKQQTDATTAVVTGKADVFFADSP--V 237

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                     +   L     + P A AI +GD++    V     
Sbjct: 238 VGYAIAQTDGQLEQLGKDFDEVPNAIAIKKGDSQTTEAVQKAMQ 281


>gi|261338110|ref|ZP_05965994.1| serine/threonine-protein kinase PknD [Bifidobacterium gallicum DSM
           20093]
 gi|270276732|gb|EFA22586.1| serine/threonine-protein kinase PknD [Bifidobacterium gallicum DSM
           20093]
          Length = 307

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 61/224 (27%), Gaps = 13/224 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             ++  G L  G+         +  +G    G+DV   +AL   +F   +KI  +     
Sbjct: 59  ASVRDSGELTVGMELSYAPAEFLAEDGKTPTGYDVQLSQALG-RLFGLETKI--VSTTFD 115

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ S + D+       T  R     + F           +            L G 
Sbjct: 116 TIVPSVGS-KFDLGITAMTITQER--MDSVDFVSYYKAGSMWVVKKGNPEKVDTKDLCGD 172

Query: 147 SICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            I VQ GT  E              N        ++  +        + D +  D     
Sbjct: 173 IIAVQTGTVQEEEANSIKEQCAADGNKAVEVQSMKQQTDAATNVVMGKADVFYADSPI-- 230

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                +    +   L +         AI +GDTE    V     
Sbjct: 231 GGYAISQTDGQLEQLGENAGTVLQGIAIKKGDTELAKAVQAAMQ 274


>gi|323700542|ref|ZP_08112454.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323460474|gb|EGB16339.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 282

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 85/256 (33%), Gaps = 17/256 (6%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASIL--GDIKKRGFLKCGINTGLVGFAEVKA-NGDW 56
           M K    V  L ++ L  T+F+  +  L    IK+ G +  GIN         +      
Sbjct: 1   MKKFTAIVLCLLVLGLVGTAFAGESRDLLPDSIKESGKIIVGINGIFPPMEFKEPGTDTL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DV+   A++  +      IQY      +   ++ +K++D++      + +R     L
Sbjct: 61  VGIDVELVEAIAKELGVK---IQYDDQQFDQLINSINTKRVDMVISGMSDSAVR--RESL 115

Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMK 170
            F        Q F        I+ +  L G ++ V A T    T+  + + +        
Sbjct: 116 DFIDYFNSGTQCFTTKALAGEITDLEALDGKTLAVSAATDYLTTMQKWNEDNLVSKGKAG 175

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
            + +  +            R  A    +S          +    V +  ++  +P   A 
Sbjct: 176 INIMAVDSAASARMQMLQGRAQA--SALSPEALGWANVQQKGAFVAVGPLLESNPYGIAF 233

Query: 231 IQGDTEWYNIVSWTHY 246
            + + +  + V     
Sbjct: 234 SKNNAQLRDAVYAALQ 249


>gi|306827988|ref|ZP_07461255.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pyogenes ATCC 10782]
 gi|304429907|gb|EFM32949.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus pyogenes ATCC 10782]
          Length = 262

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 73/238 (30%), Gaps = 15/238 (6%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L       T+ S N            +          F+  +  G   G+D++  +A+ 
Sbjct: 1   MLAACGSSKTAESGNQGS------SKEVLFATVGTTAPFSY-EKGGQLTGYDIEVAKAVF 53

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                D  K+ +        F  L S +  +   N  +T  R       F          
Sbjct: 54  K--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA--KYLFSYPIGATPSV 109

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EIDAAY 186
            ++ K   I S   + G S  V  GTT+   L  + K H+ K   + F      ++    
Sbjct: 110 LVVPKDSDIKSYDDIEGHSTQVVQGTTSVTQLEAFNKEHSDKPVTLKFTNENITQMLTNL 169

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSW 243
              + D    D   + A  + N        +    ++ P +     Q   +  + V+ 
Sbjct: 170 SEGKADFKIFDAPTVNA-IIKNQGLDNLKTIEPTSTEQPFIYFIFSQDQEKLQSFVNK 226


>gi|315122481|ref|YP_004062970.1| putative amino acid-binding periplasmic ABC transporter protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495883|gb|ADR52482.1| putative amino acid-binding periplasmic ABC transporter protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 274

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 16/223 (7%)

Query: 30  IKKRGFLKCGINTGLVG--FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           IK +  L+ G +       F      G+  GFD+D  + ++  +     KI +       
Sbjct: 37  IKDQSILRVGTDGIYPPHSFHSQNGKGELVGFDIDLIKEIAHRL---NLKIVFFETMVNG 93

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGA 146
               + + + D+L  N   T  RE      F           I+   +  I + + L+  
Sbjct: 94  LITGIDTNRYDVLV-NVAITPSREK--KYYFSTPYITHNVLLIVRSDEKNIHNFNDLTD- 149

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALK 205
            I VQ   T    +A   KAH      I     E+      + R +A    DI     LK
Sbjct: 150 KIVVQILGTDLSRVAKELKAH-----LIFSHNFEQSLQLLLSKRANATMIADIPFFDFLK 204

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +      I   I   S +   I +G+ +    +  T  A+
Sbjct: 205 HGPNNGHLFKIADRIKESSNIGFMIRKGNDKLKKAIDETLCAI 247


>gi|117924092|ref|YP_864709.1| extracellular solute-binding protein [Magnetococcus sp. MC-1]
 gi|117607848|gb|ABK43303.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Magnetococcus sp. MC-1]
          Length = 269

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 16/242 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
             +++ L+ L   + +   S L  I+ R  ++  I  G          +   +G D+D  
Sbjct: 12  LSTVIFLVALAEPAIAQAESRLQTIQARQTVRVCIWPGYFSITYRNPRSQQLEGIDIDLA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-Y 123
            A ++ +      ++++  +  +    L   + DI           + +  + F      
Sbjct: 72  HAFAADLG---VTVEFIDSSFSKLKENLTQDRCDIAMHGVGV--RADRAEFMDFSAPYLR 126

Query: 124 FDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                 +      I +   +   G  I VQ GT  E  +  Y      +    V +  + 
Sbjct: 127 SGIYAVVDKNHFAIQAWQDIDRKGHIIVVQKGTYMEPVMRSYL----HQGTLTVVDTFKA 182

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNI 240
            +    A R D +  D    Y  ++         +  P +++ +  A A+ +G+ EW   
Sbjct: 183 REQEVEAGRADVFMTDYP--YGRRMALLSSWAKLLTPPQVLAPTDYAYAVPKGEPEWLAR 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242


>gi|116670155|ref|YP_831088.1| extracellular solute-binding protein [Arthrobacter sp. FB24]
 gi|116610264|gb|ABK02988.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 233

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 50/171 (29%), Gaps = 8/171 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                G +T    F    A G+  G D+D  R ++    +    ++   L       AL 
Sbjct: 67  KTFVIGTDTTFAPFEFRDAGGELTGIDMDIIREIAK---NQGFAVEIKSLGFNAALQALS 123

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQA 152
           S Q+D +      T  R+      F    +  G    +      +     L G ++  + 
Sbjct: 124 SNQVDGVIAGMSITEPRK--QIYDFSDPYFESGVQMAVAKSNTDVKGYEDLKGKTVTAKT 181

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           G+  E         +         ++   +    ++    A   D   L  
Sbjct: 182 GSEGETFAKSIAGQYGF--TVKALDQSATMYELVKSGNAVAVFDDYPVLAY 230


>gi|322513523|ref|ZP_08066624.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Actinobacillus ureae ATCC 25976]
 gi|322120676|gb|EFX92567.1| arginine ABC superfamily ATP binding cassette transporter, binding
           protein [Actinobacillus ureae ATCC 25976]
          Length = 244

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 15/226 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L   +      F      G+  GFDVD   A+   I    +   +   +      A
Sbjct: 23  QAKDLTFAMEPSYPPFELTNEKGEIIGFDVDIANAICKEI---QANCSFKSQSFDGLIQA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           ++ K+ID      D T  R   +   F    Y     FI  K K   + +     ++ VQ
Sbjct: 80  VKQKRIDGAISAIDITEARAKQVA--FTDAYYDSSASFIAVKGKADLNTA----KNVGVQ 133

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +  +    K    +Y P  +  +++     +  R D   GD + L  +       
Sbjct: 134 NGTTFQQYVVAEAK----QYAPKSYASLQDAVLDLKNGRIDIIFGDTAVLADMLSKEAEL 189

Query: 212 SE--HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +       + L  A+ + ++E    ++    A+    E  
Sbjct: 190 SFVGENVTNQKYFGNGLGIAVNKSNSELVAELNKGLAAIKANGEYQ 235


>gi|167923553|ref|ZP_02510644.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           BCC215]
          Length = 328

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKE--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|126463861|ref|YP_001044974.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105672|gb|ABN78202.1| extracellular solute-binding protein, family 3 [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 287

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 74/246 (30%), Gaps = 14/246 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F  ++ L  +  T+    + +  +I+     +  ++      A  K +G  +GF+
Sbjct: 1   MTNPRFGGLVALAFMAATTLPAQSQV-AEIRDS--YRVALDGTFAPHAMPKLSGGVEGFN 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +   +    S++            ALQ+   D L         R  S  L F  
Sbjct: 58  VDLAQLIGERLG---SEMTVDAAQFSGLIPALQAGTYDFLVAPVTVNQER--SENLLFTE 112

Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F++         +    G +I V  G+     L D+   +      + F   
Sbjct: 113 GFMDTNFAFVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEYGW--TVVPFGTN 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A    R DA     +   A       P    +  +I +      A    D    N
Sbjct: 171 TDAVEAVATGRADANLSGAT--VAAWAALQNP-AVDLSYEIQTGLVWGLAFRLDDAATRN 227

Query: 240 IVSWTH 245
            +    
Sbjct: 228 RIDLVL 233


>gi|167899025|ref|ZP_02486426.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           7894]
          Length = 328

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 80  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 137 SGRVDAVLSNVTVTEERKE--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 193

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 194 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 253

Query: 207 TN 208
             
Sbjct: 254 QQ 255


>gi|167587925|ref|ZP_02380313.1| Prephenate dehydratase [Burkholderia ubonensis Bu]
          Length = 268

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 72/239 (30%), Gaps = 15/239 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L D+  RG L+         ++  +A+G ++G D+    AL+ ++      ++     
Sbjct: 37  SRLDDVLARGTLRVCTTGDYKPYSYYRADGRFEGIDIGMADALAKSLGVKADYVK----T 92

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--- 141
           +     A    + DI       TL R+      F      DG+  I+         +   
Sbjct: 93  SWPTLTADFVAKCDIAVGGVSTTLERQK--RAFFTQPYMTDGKTPIVRCADVDQYQTVAQ 150

Query: 142 -QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  + V  G T E     +F   N      V+     I     A + D    D S 
Sbjct: 151 IDRPETRVIVNPGGTNERFAKQHFTHAN----VTVYPDNVTIFKQILAGKADVMVTDASE 206

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              L+   +     V           A  + +GD  +   V    +  +   E      
Sbjct: 207 TL-LQQKLNPGLCSVHPDQPFQFGEKAYMVPRGDVVFQQYVDQWLHLALANGEFRAISD 264


>gi|145613688|ref|XP_363512.2| hypothetical protein MGG_01438 [Magnaporthe oryzae 70-15]
 gi|145020727|gb|EDK04856.1| hypothetical protein MGG_01438 [Magnaporthe oryzae 70-15]
          Length = 261

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 66/249 (26%), Gaps = 9/249 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-------WKGFDVDFCRA 66
           +   T   +  S L  I  RG LK G+      F+ +  +         + G DVD  ++
Sbjct: 1   MAAKTGGCSAPSQLDAIIARGHLKVGMTGAYKPFSYLDPDSASNSSSSGYIGADVDMAKS 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           LS A+       +++          +   + DI       TL R      +   I     
Sbjct: 61  LSQAMGLTKDP-EFVHATFANMTTEINEGRYDIGMTGVSITLARARLCFYSNPLIRVGKV 119

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                       S++ +    + V   +     + D       +           I  A 
Sbjct: 120 ATVRCEDASKYQSLAAIDVEGVRVATPSGGSNEVFDRANLKKAEILVYTETDNNIIFQAV 179

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              + D    D          +      V   +  S   +   + + D      V+   +
Sbjct: 180 VDKKADVMITDRVEAELQAKMHPGVLCAVNPEEPFSFEEIGYIM-KRDVVLQQFVNQWLH 238

Query: 247 AMVTAEELG 255
               +    
Sbjct: 239 VQQGSGAWN 247


>gi|13475818|ref|NP_107388.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
           MAFF303099]
 gi|14026577|dbj|BAB53174.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
           MAFF303099]
          Length = 283

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 75/279 (26%), Gaps = 45/279 (16%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      V+   L +  F   +        I                +    A+G   G 
Sbjct: 1   MKFNRLAVAAAALSMFGFMHTAFAEDAPKSI------TIATEGAYAPWNFTNADGKLDGL 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +++    L   +     K   +  +      +L+  + D++      T  R     + F 
Sbjct: 55  EIELANNLCERM---KVKCTIIAQDWDGLIPSLKVGKFDVIMAGMFITPKR--LETIDFT 109

Query: 120 PITYFDGQGFIMHKKKGISSV-----------------------SQLSGASICVQAGTTT 156
                D  GF + K   +  +                         L G  + VQA T  
Sbjct: 110 QPYAVDPGGFAVAKDSELGKLGVSAEKFNLDDEAASKAAIEKLKPLLKGKVVGVQAATMM 169

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              +  YF           ++  E+ D    A R DA     +AL A     +    H  
Sbjct: 170 LDFVKKYF---GDTVEIREYKTTEQHDLDLAAGRVDALFAQRTALAATLSKPE--FAHYT 224

Query: 217 LPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
           L        L        + + DT+   +++      + 
Sbjct: 225 LAGPGFVGGLFGRGTGAGLRKEDTKLKEMLNAAIDGAIA 263


>gi|307544384|ref|YP_003896863.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307216408|emb|CBV41678.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 258

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 91/253 (35%), Gaps = 36/253 (14%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G++ G   F  V+ +   KGF+VD   A++  +  +   + +   N    F  L+S 
Sbjct: 34  LRVGMSGGYFPFTFVEQD-TLKGFEVDVMEAVADEMGTE---VAFETANFSGLFGMLESG 89

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGT 154
           +ID ++     T  R+      F     +DG   ++ K    +S V  L G S+ V  G+
Sbjct: 90  RIDTIANQITITDERQA--KYVFTEPYVYDGAQVVVKKGNDTTSGVEDLKGKSVAVNLGS 147

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E  L +   A   +     +E   E D A    R DA+  D  +  A ++  ++P   
Sbjct: 148 NYEQLLRELPYA--DEIDIRTYESNIEQDTAL--GRVDAFVMDRVS--ASQVIKEKPLPL 201

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV- 273
            +     S+   A                        EE    +  ++Q           
Sbjct: 202 ELAGKPFSEIRNALPFRDT------------------EEGRELRDRVDQALATLREDGTL 243

Query: 274 ----QRFLGIDKS 282
               +R+ G D +
Sbjct: 244 TDISERWFGTDIT 256


>gi|15618393|ref|NP_224678.1| arginine periplasmic binding protein [Chlamydophila pneumoniae
           CWL029]
 gi|81625711|sp|Q9Z869|ARTJ_CHLPN RecName: Full=Probable ABC transporter arginine-binding protein
           ArtJ; Flags: Precursor
 gi|4376767|gb|AAD18622.1| Arginine Periplasmic Binding Protein [Chlamydophila pneumoniae
           CWL029]
          Length = 259

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 72/250 (28%), Gaps = 18/250 (7%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K    FF + + ++ L  TS  +       I +      G N     F  V A G+  
Sbjct: 1   MIKQIGRFFRAFIFIMPLSLTSCES------KIDRNRIWIVGTNATYPPFEYVDAQGEVV 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D  +A+S  +       ++         L L+  +ID +      T  R+  + L 
Sbjct: 55  GFDIDLAKAISEKLGKQLEVREF---AFDALILNLKKHRIDAILAGMSITPSRQKEIALL 111

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                       +  +      +     +S+ VQ GT  E  L               F+
Sbjct: 112 PYYGDEVQELMVVSKRSLETPVLPLTQYSSVAVQTGTFQEHYLL-----SQPGICVRSFD 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTE 236
              E+    R  +      + S    +             LP           + +   E
Sbjct: 167 STLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPE 226

Query: 237 WYNIVSWTHY 246
               +     
Sbjct: 227 EIQTIQQAIT 236


>gi|225388955|ref|ZP_03758679.1| hypothetical protein CLOSTASPAR_02697 [Clostridium asparagiforme
           DSM 15981]
 gi|225044985|gb|EEG55231.1| hypothetical protein CLOSTASPAR_02697 [Clostridium asparagiforme
           DSM 15981]
          Length = 239

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 66/218 (30%), Gaps = 10/218 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                  +T    F      GD  G D+D  +A++         +    +       AL+
Sbjct: 18  KTYIINTDTTFAPFEFENEKGDLVGIDMDILKAVAEDQGFSYEVVP---VGFSAATTALE 74

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D +      T  R+      F    +  G G  +     I S  +L+G ++  + G
Sbjct: 75  AGECDGVIAGMSITDQRKE--KYDFSDPYFDSGVGMAVLADSDIDSYEKLNGQNVAAKIG 132

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T            +        +E    +  A  A    A   D   +        R   
Sbjct: 133 TEGCKFAESIADKYGF--TVTQYEDSATMYQAVLAGEAVACFEDYPVVGYEI---SRGLG 187

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             +LP I + +    A ++G+      +     A + A
Sbjct: 188 LKLLPTIEAGNSYGFATMKGENPELVEMFNKGLANIKA 225


>gi|51473349|ref|YP_067106.1| glutamine-binding periplasmic protein GlnH [Rickettsia typhi str.
           Wilmington]
 gi|51459661|gb|AAU03624.1| glutamine-binding periplasmic protein GlnH [Rickettsia typhi str.
           Wilmington]
          Length = 241

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 63/210 (30%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +            +    L  G       +  ++ +G+  G D
Sbjct: 1   MK---FLKIFLLSFLLVSC--------EKKETEKTLIVGTAADNPPYEFIQ-DGEIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      I     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAISQRLNKK---IIIKNFDFNGLLAALISENIDVAIAALSVTQERSEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I    + I +   L    + VQ G+  E    D   +H M           
Sbjct: 104 SYAKARFAIIYRTGENIQNSKDLYNKIVGVQLGSVLEKKAQDL--SHTMNIKVHALANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKAKVIDAIISEEFQGKKLKENNSN 191


>gi|266618825|pdb|3KBR|A Chain A, The Crystal Structure Of Cyclohexadienyl Dehydratase
           Precursor From Pseudomonas Aeruginosa Pa01
          Length = 239

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 71/249 (28%), Gaps = 18/249 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              S L  I + G L+         F+     G + GFDVD  + L+ ++      +   
Sbjct: 3   AQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDXAQRLAESLGAKLVVVP-- 60

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----HKKKGI 137
             +           + DI        L R+      F      DG+  I       +   
Sbjct: 61  -TSWPNLXRDFADDRFDIAXSGISINLERQR--QAYFSIPYLRDGKTPITLCSEEARFQT 117

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                  G +  V  G T E     + +A+  K   +V      I       + D    D
Sbjct: 118 LEQIDQPGVTAIVNPGGTNE----KFARANLKKARILVHPDNVTIFQQIVDGKADLXXTD 173

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                 L+         V        +  A  + + +  +   V    +    AE+ G+ 
Sbjct: 174 A-IEARLQSRLHPELCAVHPQQPFDFAEKAYLLPRDE-AFKRYVDQWLH---IAEQSGLL 228

Query: 258 QKNINQVSK 266
           ++      +
Sbjct: 229 RQRXEHWLE 237


>gi|170698189|ref|ZP_02889267.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170136866|gb|EDT05116.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 312

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 75/243 (30%), Gaps = 43/243 (17%)

Query: 1   MYKDFFVSI----LCLIILFFTSFSTNASILG-----DIKKRGF---------------- 35
           M +  F       +  + L     +  A+          ++RG                 
Sbjct: 1   MRRTAFPIAHLVRVLAVALIGAGVAAQAATFDLSPEQRGRQRGTVNPAVEQAVPGGFRFA 60

Query: 36  ----LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
               L  GI   L   +          GFD D  + ++ +I      ++ +PL+  +  L
Sbjct: 61  EANTLTIGIAPNLPPLSTYATDARTVVGFDPDLAQLVADSIGRK---LKIVPLSWADWPL 117

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGAS 147
           ALQS ++D +  N   T  R+      F      D  GF +        I     ++G  
Sbjct: 118 ALQSGKVDAVISNVTVTEQRKE--KFDFS-TYRKDQLGFYVKSGNRIAAIREPKDVAGLR 174

Query: 148 ICVQAGTTTELTLADYFKAHNM----KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +   +GT  E  L ++ + +            +    E   A ++ R D      S L  
Sbjct: 175 VVTDSGTNQEKILLEWNRQNVERGLAPVAIQYYADAAERWVALQSGRVDTIFSVNSMLAY 234

Query: 204 LKL 206
              
Sbjct: 235 QAS 237


>gi|62390214|ref|YP_225616.1| ABC-type amino acid transport system, component [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325551|emb|CAF21340.1| ABC-type amino acid transport system, secreted component
           [Corynebacterium glutamicum ATCC 13032]
          Length = 304

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 12/218 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +   + +RG L  G N     F    ++G   G ++D  RA++  +  + S      
Sbjct: 51  QAMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMDLVRAMAGVMGLEFSP---QE 107

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +      ++Q+  +DI +        R       F    +   Q      ++       
Sbjct: 108 QDFSLILPSVQAGTLDIGASGFTDNEER--RENFDFIDFLFAGVQWAQATDRETPIDPEN 165

Query: 143 LSGASICVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G ++ VQ  T  E        A            + +E  +    A    R DA   D
Sbjct: 166 ACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTAATALILGRADALAAD 225

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                     ++      ++ D+   +P   A      
Sbjct: 226 SPVSAWAAERSE--GRIEVVGDMYLAAPFGFAFPLESD 261


>gi|317154614|ref|YP_004122662.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944865|gb|ADU63916.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 252

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 47/163 (28%), Gaps = 9/163 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+  +      ++     G   GF+VD   AL+ A+  +      + L   E    L   
Sbjct: 24  LRVAVEDHYPPYSYADEAGRMAGFNVDIAHALARAMGRE---CVIVALPWNELLPGLAHG 80

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
           Q D +          +      F         GFI        +S   L G ++  Q  T
Sbjct: 81  QHDAIVACMAV--KPDRLEFADFTNYYLRSKTGFIGRAGMDHDTSPEALRGWTLVSQEDT 138

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                L + + A            +EE   A    R D     
Sbjct: 139 AQLAYLRETYGA---VAVVEGHPSMEEAFLAVARGRADLCLTP 178


>gi|209547728|ref|YP_002279645.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533484|gb|ACI53419.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 292

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 64/213 (30%), Gaps = 15/213 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   +  L       ++   NA  L    ++G L       + G       G   G+D +
Sbjct: 7   RRVVMCALLAGSFMASAPLANAFELA---EQGKLTVAFTGDMPGSGWQD--GKLIGYDGE 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++  +           +       ++QS ++D++     WT  R   + L+     
Sbjct: 62  IMQRIADKLGLKIQPAL---MEWSGTIASVQSGRVDVMLGTMGWTEKRTKIMTLSEPIHY 118

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G +   K     +S L G  +    G +    L              +++  +  
Sbjct: 119 --FKNGIMQSNKTNWDKLSDLEGKKVGTITGFSFVPELKTI-----KGIDLSLYDTSDAA 171

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
                A R DA  GD   +      N   + H 
Sbjct: 172 VRDLIAGRIDAVIGDPPVVSYAIKQNSDWNMHF 204


>gi|160896185|ref|YP_001561767.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160361769|gb|ABX33382.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 279

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 70/230 (30%), Gaps = 14/230 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76
           +  +    +L  I   G L+  I     G     A  G   G D +    L+  +     
Sbjct: 34  SGCAGAGEVLDRIAATGALRVCIWPDYYGITFRDARTGRLTGIDAELSVELAKDLG---V 90

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKK 135
           ++QY+  +       L   + D+          R+    L F       D  G      +
Sbjct: 91  RVQYVDSSFPRLIPDLLESRCDVAMFAVGILAQRQK--QLRFTQPYLSSDIYGVTTKSNQ 148

Query: 136 GISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            + S + +   G  + VQ GT  E  + +  +        +  E  +  +    A R D 
Sbjct: 149 TVQSWADIDQPGVQVAVQRGTFMEPVMRETLR----HARLVPIEPPQSREKELMAGRVDV 204

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +  D        L +   +  +  P      P   A    DT+W   +  
Sbjct: 205 FMTDYPYSR-RLLDSSDWARLIAPPKPFHVLPYGYATSPADTQWLARLDQ 253


>gi|297564128|ref|YP_003683101.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848577|gb|ADH70595.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 306

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 85/283 (30%), Gaps = 29/283 (10%)

Query: 5   FFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
             +  + L  L   + +            AS L  ++++GF+  G+    + F  V  +G
Sbjct: 19  LRLGGVGLATLGLAACTRVDGGGGEGEEGASTLDRLREQGFVAVGL-ANEIPFGFVDDSG 77

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G      +A+   +     +     +N       L + + D+++     T  R   +
Sbjct: 78  NPAGQSPAVAKAVFEELGVPEIQAS--SVNWDGLIPGLNANRFDVIAAGMFITPERCGQV 135

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYH 172
             +    T  +         + I   +        +      + E T A+YF+    +  
Sbjct: 136 AFSEPTATSPEAFMVAEGNPENIQHFTDFVDNPDLMLAVLNGSVEQTYAEYFEVPENQME 195

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--SEHVILPDIISKSPLAP-- 228
            I             A R DA +    +   L      P        P+I  +       
Sbjct: 196 LIP--NQTAGYELLEAGRVDAMSMLSVSHTYLLQDRGGPFEVTEPFFPEIDGREEKGWGG 253

Query: 229 -AIIQGDTEWYNIVSWTHYAMVT-------AEELGITQKNINQ 263
             + Q DT+    V+                EE G T+ ++  
Sbjct: 254 LCLRQQDTQLLEEVNRVIAEFKESGRLLELGEEWGFTEADLPD 296


>gi|254246701|ref|ZP_04940022.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124871477|gb|EAY63193.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 270

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 76/240 (31%), Gaps = 15/240 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            S L D+  RG L+         ++  +A+G ++G D+D   +L+ ++      ++    
Sbjct: 38  GSRLDDVLARGALRVCTTGDYKPYSYYRADGRFEGIDIDMAESLAKSLGVKTDYVKTSWS 97

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-- 141
           N    F+A    + DI       TL R+    + F      DG+  I+         +  
Sbjct: 98  NLTNDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTPIVRCADADKYQTVA 151

Query: 142 --QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                   + V  G T E     +F   N      VF     I     A + D    D S
Sbjct: 152 QIDRPETRVIVNPGGTNERFAKQFFTHAN----LTVFPDNVTIFKQILAGKADVMVTDAS 207

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               L+   +     V           A  +  GD  +   V    +  ++  E      
Sbjct: 208 ETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPPGDVAFQQYVDQWLHLALSTGEYQAISD 266


>gi|254473004|ref|ZP_05086402.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
 gi|211957725|gb|EEA92927.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
          Length = 248

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G++ G   F  VK +   +GF+VD  RA++    DD   ++++ ++      AL++
Sbjct: 22  TIRVGMSGGYFPFTFVKQD-VLQGFEVDVARAIAEQTGDD---VEFVTMSFSGLIGALEA 77

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            +ID ++     T  RE      F     +DG   ++      I+ V  L G S+ V  G
Sbjct: 78  GRIDTIANQITITPEREA--KFTFSQPYVYDGAQVVVKAGNEEINGVEDLKGKSVAVNLG 135

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L     A   +     +E     D A    R DA+  D  +   +      P  
Sbjct: 136 SNFEELLRGLPFA--DEIDIRTYESNLAQDTAL--GRVDAFIHDRISATQVIKETPLPLA 191

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               P    ++ +     +        V      +  + +L     
Sbjct: 192 LAGAPFSEIRNAMPFRTDEDGKALAAKVDGAITELKASGKLAEISD 237


>gi|169620608|ref|XP_001803715.1| hypothetical protein SNOG_13506 [Phaeosphaeria nodorum SN15]
 gi|111057833|gb|EAT78953.1| hypothetical protein SNOG_13506 [Phaeosphaeria nodorum SN15]
          Length = 333

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 80/255 (31%), Gaps = 23/255 (9%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-----------VKANGDWKGFDVDFC 64
            +       S L  I+ RG+LK G       F+               N  + G D+D  
Sbjct: 73  SWLPCGNATSDLDKIQSRGYLKVGTTGDYKPFSYKVNNRTLLPAIPDINTTYIGADIDLA 132

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +ALS+++      I+++P N       + + + DI       TL R  +    F      
Sbjct: 133 QALSNSLSL-AKPIEFIPTNWGNLTADIAAGKFDIAMSGVSITLAR--AQRAFFSTAIQR 189

Query: 125 DGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            G+   +           +   ++G  + V  G T E     + +A+      ++ +   
Sbjct: 190 VGKAACVRCADLTRFSSLAAIDMAGVKVAVNPGGTNEA----FDRANLKSATIVLVQDNN 245

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +  A    + DA   DI  +      +      V      +   L   I   D  W   
Sbjct: 246 AVYQAVIEGQADAMISDIVEVELQVRLHPETLCIVNPDAAFTFEELGYMI-GRDPVWKQY 304

Query: 241 VSWTHYAMVTAEELG 255
           +    +  V +    
Sbjct: 305 LDTFVHFQVGSGNWN 319


>gi|300718063|ref|YP_003742866.1| octopine ABC transporter, extracellular solute-binding protein
           [Erwinia billingiae Eb661]
 gi|299063899|emb|CAX61019.1| octopine ABC transporter, extracellular solute-binding protein
           [Erwinia billingiae Eb661]
          Length = 282

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 73/273 (26%), Gaps = 40/273 (14%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K F    +  + L          +         L          + +   +G+  GF+ 
Sbjct: 5   RKRFLTGAIAALGLLVLPQLQARDLSS-------LTFATEGAFPPYNQTTPSGEIVGFEP 57

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + ++     +    + +  +       L   + D +      T  R     + F   
Sbjct: 58  DMIKEIAKRAGFNY---KIVAQSWGGMIPGLLDGKYDAIVDAVSITPKR--QETINFTSP 112

Query: 122 TYFDGQGFIMHKKKGISSVSQ-----------------------LSGASICVQAGTTTEL 158
               G GF+  K   I S+                         + G +I VQ  T    
Sbjct: 113 YINGGSGFVTTKDSSIPSLPGTGTRISLTDDAASKPAIDSIAKLVKGKTIGVQVATIQAD 172

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVI 216
            L  YF           +   ++      A R D     +     Y  +   +       
Sbjct: 173 FLKKYF---GDIATIRTYPGGKDTFFDLDAGRVDMVMAAVPNLTAYVKRSNGNGALTGYT 229

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             + +  S  A  + + DTE    ++    +MV
Sbjct: 230 FQNGVLGSGSAIGMRKDDTELQAKLNTAIDSMV 262


>gi|53722694|ref|YP_111679.1| hypothetical protein BPSS1674 [Burkholderia pseudomallei K96243]
 gi|254201140|ref|ZP_04907505.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei FMH]
 gi|52213108|emb|CAH39147.1| putative exported protein [Burkholderia pseudomallei K96243]
 gi|147748752|gb|EDK55827.1| bacterial extracellular solute-binding protein family 3
           [Burkholderia mallei FMH]
          Length = 317

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 69  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLADSLGRK---LKIVALAWPDWPLALE 125

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 126 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIRQPRDVAGLRVIT 182

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEID---AAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++      A +A R DA     S L     
Sbjct: 183 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKSVALQAGRADAIFSVNSVLAYQAA 242

Query: 207 TN 208
             
Sbjct: 243 QQ 244


>gi|315645851|ref|ZP_07898972.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
 gi|315278612|gb|EFU41926.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
          Length = 293

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 61/220 (27%), Gaps = 13/220 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L +  +RG L+         F+     G   GFDV+    ++  +     K +++    K
Sbjct: 53  LRNAVERGTLRIATERDYPPFSYHGTGGRLTGFDVEVAEEVARHM---ELKAEFVETEWK 109

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSG 145
                L   + D +          +      F           ++   +  + +   + G
Sbjct: 110 NLLPGLTEGKYDAVFNQ--IEDRPDRRALYDFSVAYLSSTPVLLVRSGEDQVRTFPDIKG 167

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             + +    T          A       +  + + +          DA   D  ++  LK
Sbjct: 168 KRVGLNPTGTYNDI------AKKHGAIIVPVKYIYDAARMLARSELDAIISDPLSVTNLK 221

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                     +     +    A A ++G+ +    V    
Sbjct: 222 QQFPDMPVTTVQSANQAFEVSA-AFVKGNPDLVAAVDNAL 260


>gi|152964894|ref|YP_001360678.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
 gi|151359411|gb|ABS02414.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
          Length = 341

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 84/261 (32%), Gaps = 15/261 (5%)

Query: 23  NASILGDIKKRGFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            A +   I+ RG L  G    G    +     +    G + D    +++ +  +P     
Sbjct: 79  AAKVPRAIRDRGTLVIGTTGNGNPPLSFRADDDETVIGIEPDIALLVAATLGLEPE---I 135

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-- 138
              + +  FL+++S Q D+   N   T  R+      F      D   + + K   I+  
Sbjct: 136 RTTSWENLFLSMESGQYDVGFSNITVTEERKE--KYDFA-SYRVDTLAWEVAKDSDITRI 192

Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCDA 193
              + ++G ++ V +GT  E  L D+   +            +++  +   A R+ R  A
Sbjct: 193 AGPADIAGLTVSVGSGTNQEKVLLDWDAQNVAAGREPVKIQYYQQAADTYLALRSGRIQA 252

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
             G                   ++P   +      A  Q        ++     ++ +  
Sbjct: 253 SFGPNPTAAYHAAVAGDTKVVGLVPGGGTVQAAIAATTQKGNGLVEALADALNHLIGSGA 312

Query: 254 LGITQKNINQVSKDTTNPDVQ 274
              T +  +   +     ++ 
Sbjct: 313 YAKTLERWSLADEAVPASEIN 333


>gi|298294127|ref|YP_003696066.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296930638|gb|ADH91447.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 283

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 69/227 (30%), Gaps = 19/227 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G       F+ V ++G+  G + +  R +   I  D    + + ++ K    ++  
Sbjct: 36  KLKLGNEGVYPPFSMVDSSGNLTGMEPELAREMCKRIGAD---CEIVVMDFKALIPSMLQ 92

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQ 151
            + D +      T  R       F     ++   F++ K    +   +     G  I +Q
Sbjct: 93  GKFDGIVTQISPTPER--MDKALFATPIVYNPATFVVKKGSNYTLTKEGVTGKGLRIALQ 150

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G +    +  +F      +  + ++  +++     A R D             +     
Sbjct: 151 RGASMVPYIHKHFGK--DTFVEVYYDNPDQMKLDLLAGRLDLVFDSKINWTLELIAKPEG 208

Query: 212 SEHVI------LPDIISKSP---LAPAIIQGDTEWYNIVSWTHYAMV 249
            ++ +      L D          +    +        V+     M+
Sbjct: 209 KDYELAGGDHWLGDPSIPEAERGYSWIFPKKSEALVKRVNGALAEMI 255


>gi|238021820|ref|ZP_04602246.1| hypothetical protein GCWU000324_01724 [Kingella oralis ATCC 51147]
 gi|237866434|gb|EEP67476.1| hypothetical protein GCWU000324_01724 [Kingella oralis ATCC 51147]
          Length = 281

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 72/231 (31%), Gaps = 31/231 (13%)

Query: 1   MYKDFFVSILCLIILFFT-----SFSTNA---------------SILGDIKKRGFLKCGI 40
           M+K   +     ++L        + + +A               ++L  + K+  +  G 
Sbjct: 1   MFKQTLLGFSVAVLLAACGKGGDAPAASAVAPQPAASAAGASGGNLLDKLNKKETILVGT 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 F   + +G   G+DV+  RA++  +     ++++           L++ + DI+
Sbjct: 61  MGTYAPFTYHEKDGKLTGYDVEVTRAVAEKLG---VQVEFKETPWDAMMAGLKAGRFDIV 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELT 159
           +     T   E            + G+  +       ++ +  + G    V   +  +  
Sbjct: 118 ANQVALT-SPERQAMFDKATPYSWSGKMLVARADHADVTKLEDIKGKKTAVMLASNYDEV 176

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                 A  M    +  + + +     +  R +    D  +L      +  
Sbjct: 177 ------AKKMGADLVHTDTMAQGLLIVQQKRAEFTLNDELSLLDYLKKDPN 221


>gi|254512984|ref|ZP_05125050.1| extracellular solute-binding protein, family 3 [Rhodobacteraceae
           bacterium KLH11]
 gi|221532983|gb|EEE35978.1| extracellular solute-binding protein, family 3 [Rhodobacteraceae
           bacterium KLH11]
          Length = 258

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 18/227 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           ++ S++  IK+ G ++ G++   V ++    NGD  GF++D  R L+  +  +   ++++
Sbjct: 15  SSESVIETIKQDGVIRIGLSL-FVPWSMRDKNGDLIGFELDVGRQLAKDMGVE---VEFV 70

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSV 140
           P        AL S   D++      T  R  +L + F     F G   + +K+     S 
Sbjct: 71  PTAWDGIIPALVSGNFDVIISGMSVTAQR--NLTINFTDPYAFSGLAILANKELTTGMSR 128

Query: 141 SQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             L     +   + G T    +A  F   N     ++F+               A     
Sbjct: 129 EDLNSPDVTFTARRGATPATVIAKAFPEAN----LLLFDEDGASTQEVLNGNAHATMASQ 184

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLA--PAIIQGDTEWYNIVSW 243
                 +     P   V+L +     P      + +GD +  N  + 
Sbjct: 185 PTP--NREAGRHPETLVVL-EGQLFDPRGEAFGMRKGDPDAMNFFNN 228


>gi|323528626|ref|YP_004230778.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia sp. CCGE1001]
 gi|323385628|gb|ADX57718.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia sp. CCGE1001]
          Length = 284

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 79/259 (30%), Gaps = 15/259 (5%)

Query: 1   MY-KDF--FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M  K     +  LC+        + +AS    L  I++ G ++ G       FA    +G
Sbjct: 1   MKAKRTSGLLGALCVAAATLAVPAQHASAETTLQRIQRTGEVRIGY-ANEAPFAYTTPDG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G   +  R + + +      +  +          L++ + D+++     T  R    
Sbjct: 60  KVTGESPEIARKIFAKMGVKK--VDGVLTEWGSLIPGLRAGRFDVIAAGMYITPER--CK 115

Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +AF    Y      ++ K     + S + +        A     + LA+   A      
Sbjct: 116 QVAFANPQYQIQDTLLVPKGNPKNLHSYADIGKQPDLKLAVMAGAVELANSRDAGVKDAQ 175

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAI 230
            +          A RA R DA  G    +  L        E       D       A A 
Sbjct: 176 FMQVPDTTAQLQAVRARRADAAAGTALTMKGLAAKASDQVEVVANFTDDAKHTGYGALAF 235

Query: 231 IQGDTEWYNIVSWTHYAMV 249
              DT+  + V+   +  +
Sbjct: 236 RPEDTDLRDAVNKQLHDWL 254


>gi|257094179|ref|YP_003167820.1| family 3 extracellular solute-binding protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046703|gb|ACV35891.1| extracellular solute-binding protein family 3 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 263

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 16/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M + F   +  L ++           L  I     L+  I     G +       +  G 
Sbjct: 1   MKETFCRFLAMLCLVQPVLAGEAPDRLARIAASKQLRVCIWPDYYGISFRNPKTQELAGV 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  R L+  +  +   +Q++  +       + + + DI       T  R+  L    +
Sbjct: 61  DIDNARELARELGVE---VQFIDSSFARLVADVTADRCDIAMFAIGITPQRQEKLRFT-Q 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           P    D         + + S + +   G  + V  GT  E  +     A        V +
Sbjct: 117 PHLASDIYAITTKTNRRLHSWADIDKPGTVVVVARGTLHETVMKTRLMAA----ELRVVD 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDT 235
                +   ++ R D +  D       +   D      ++        +P A A+  GD 
Sbjct: 173 TPAAREQEVQSGRADVFMTD---YAFSRRMLDNSDWARLISPAGSYHVTPYAWAMAPGDD 229

Query: 236 EWYNIVSWTH 245
            ++  V    
Sbjct: 230 RFHARVDKVL 239


>gi|307131243|ref|YP_003883259.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
 gi|306528772|gb|ADM98702.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
          Length = 276

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 15/221 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             AS    IK+ G L+ G+  G   + +  A G+W G      + L+  +      ++  
Sbjct: 25  APASTWQHIKQTGELRIGVAQGEPWYFKNAATGEWDGIGYQVGKVLAKDLGVKLVTVE-- 82

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSV 140
                    ALQ+ QID +    D T  R+    + F     ++  QG ++     ++  
Sbjct: 83  -TTWGNAVAALQTGQIDTML-VLDPTEERKK--AVDFPEQPFFWYAQGVLVRDGISVTDW 138

Query: 141 SQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             L      I V  G++ +L L             + F  ++E  AA+ A R DA +   
Sbjct: 139 EDLNRPDVKIGVTLGSSPDLLLTKNLPKA----QLVRFPNMDEGVAAFYAGRVDALSYFH 194

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            AL   +    + +  +ILP  I     + AI +   + ++
Sbjct: 195 PALALQQAKVGKGN--LILPKPIVAVSTSGAIRKESDQTFH 233


>gi|126641536|ref|YP_001084520.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
          Length = 219

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 2/172 (1%)

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + +  R   L +  ID+    T  +  R+  +G  F    Y       +   
Sbjct: 3   GLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQVG--FSTNYYATEVRMAVKAN 60

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            GI S++ L+G ++    GTT++  +    K   +    I  +   +  A   + R  A+
Sbjct: 61  SGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQNIYGKDHADSFAMMASGRAAAF 120

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             D + L  L   +  P    I+  ++S  P    I + D ++  I   T  
Sbjct: 121 VMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKDDPKFKAIADRTVN 172


>gi|325979007|ref|YP_004288723.1| polar amino acid transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178935|emb|CBZ48979.1| polar amino acid transport system substrate-binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 265

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 58/197 (29%), Gaps = 15/197 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      + L                               +  F+     G   G+D
Sbjct: 1   MKKVLLGLAVLLSASLSVHVEAAD---------KKAVVATAGDIKPFSYQNKKGQLTGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   +A S  I  +  KI +        F+ L S    + + N  +T  R  +    +  
Sbjct: 52  IQVIKAASKYI--NGYKISFKKTAWDSIFVGLDSDIYQVAANNLSYTEER--ANKYLYSV 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ER 178
               +    ++ K   I+S+  + G +     GT+T   + D+   H+     I +  E 
Sbjct: 108 PIAKNPLVLVVKKGSKITSLDDIGGKTTQDDTGTSTAKFVDDWNSQHSDNPSTIDYSGED 167

Query: 179 VEEIDAAYRAHRCDAYT 195
           V +          D   
Sbjct: 168 VTKRLLDLDDGEFDYLI 184


>gi|227903012|ref|ZP_04020817.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|227869255|gb|EEJ76676.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 562

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 85/296 (28%), Gaps = 29/296 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-----------V 50
           ++     +  L+ +F      + S     K  G LK G+      +             +
Sbjct: 30  FRWIAALMTVLLSIFIGFNFNSHSTQAAKKDSGTLKIGMEANYPPYNWTQPTKTNGAVPI 89

Query: 51  KANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
             +  +  G+DV   + +   +      +            AL S +ID++      T  
Sbjct: 90  DGSNSYANGYDVQIAKIIGKRLHKK---VVVEKTQWDGLLPALTSGKIDLIIAGMSPTAE 146

Query: 110 REISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           R     + F           I +   K      +S   GA +  Q GT     +      
Sbjct: 147 RRK--AINFSEPYRKSTFVVITNKASKYSNAKKLSDFKGAKLTAQQGTLHYDLIKQL--- 201

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDII 221
              K  P        +  +  +   D Y  +     +    N        ++        
Sbjct: 202 KGSKREP-AMRDFSAMRQSLSSGTIDGYVAEDIEFESYHNVNPNIIAINLNKMAGFKVDH 260

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
             S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 261 DDSVTSIGVKKGNTKLLNEVNATLRTISNKKRDQLMSQAIREQPKAGNETKNENWL 316


>gi|302335216|ref|YP_003800423.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
 gi|301319056|gb|ADK67543.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
          Length = 305

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 80/240 (33%), Gaps = 16/240 (6%)

Query: 18  TSFSTNASILGDI----KKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72
           T  + ++           + G L    N     F  +    GD++GFDVD  +A+ + + 
Sbjct: 59  TGGAASSDTTTQAGYTLVEDGRLTLISNFYFPPFVSMDEKTGDYEGFDVDLYKAICAKLG 118

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            +P+ +  +  +     +  Q  + D+       T  RE    + F        Q  ++ 
Sbjct: 119 LEPNILPTVQFDTIVPTIK-QGGKADVSLGAITITDERE--QEIDFSDPYLDSNQALVVK 175

Query: 133 KKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                +  +   +SG  + VQ+GTT E     + + +      +  + + +     ++  
Sbjct: 176 AASAATDAAALDVSGTQVAVQSGTTGEA----WARENIPNATIVPLDDIIQCLTGVQSGL 231

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             A   D+             ++     +I +       + + + +    ++     +  
Sbjct: 232 YQASVCDLPVASYEIGIAY--TDLRTAMEIPTGEQYGVVVSKDNPKLTEAINQALKDLKE 289


>gi|219852702|ref|YP_002467134.1| extracellular solute-binding protein family 3 [Methanosphaerula
           palustris E1-9c]
 gi|219546961|gb|ACL17411.1| extracellular solute-binding protein family 3 [Methanosphaerula
           palustris E1-9c]
          Length = 764

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 16/226 (7%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                  +  I++RG L+ G N+  + F      GD  G+DV     L+   F + ++++
Sbjct: 504 LGGGGEDVKQIRERGVLRVGYNSNNIPFVFFNGKGDLVGYDVQMAYDLAR--FVNVTRVE 561

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-----K 134
           ++P+       +L S   DI+  +   T  R     + F          F++        
Sbjct: 562 FVPITGATLADSLNSGYCDIVMSSVAVTPER--LDEMKFTDSYVTVHMSFVVPDEQKAEF 619

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + +V ++ G  + V   T      A            +  +  EE    +   + DA 
Sbjct: 620 SKLENVKKMKGLRVAVFNNTALVKVAAQMLP----GATIVPIDSEEE---FFVEKKADAL 672

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                  Y + +        +I P+   +     A+ Q  ++ Y +
Sbjct: 673 ITTAEEGYTMTMQYPFYDVAIIEPNDSYQMMYGYAVAQNSSDTYLM 718


>gi|76801536|ref|YP_326544.1| polar amino acids ABC transporter permease [Natronomonas pharaonis
           DSM 2160]
 gi|76557401|emb|CAI48978.1| ABC-type transport system permease protein I (probable substrates
           polar amino acids) [Natronomonas pharaonis DSM 2160]
          Length = 279

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 65/218 (29%), Gaps = 12/218 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G   G   F   + +G+  GFD+D   A+      D     +          ALQ+
Sbjct: 57  TIVAGTAPGFPPFEFRQ-DGELLGFDIDLTEAVIER--SDYEFGGWETFEFDSLIPALQN 113

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
             ID+++         E    +AF    Y   Q  ++         S   LSG+ +  Q 
Sbjct: 114 GNIDVIAAAMTI--EDERREQIAFSDAYYEADQSVLVRSDDDDLPQSREDLSGSIVGAQG 171

Query: 153 GTTTELTLADYFKAHNMKYHPI-VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           GTT E  +        +      V++                    +     +  T    
Sbjct: 172 GTTGENEVDRLIDDGIIPESDKNVYDNYTLAATDLENGN----IDAVVVDVPVARTFSED 227

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
               +  +I +       I Q D E    V+    A+ 
Sbjct: 228 LAVEVAFEIETGEEYGFGIRQDDEELVAAVNDGLEAVT 265


>gi|316936154|ref|YP_004111136.1| family 3 extracellular solute-binding protein [Rhodopseudomonas
           palustris DX-1]
 gi|315603868|gb|ADU46403.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris DX-1]
          Length = 319

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 65/218 (29%), Gaps = 16/218 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++         F    A+G+  GF+VD  RAL   I              +    AL S 
Sbjct: 90  IRFLTEVDYPPFNFTGADGNPAGFNVDLARALCEEI---KVTCTVQMRKFETLLDALSSN 146

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAG 153
           + D +  +   T        L F    Y     F+  K   I       L G  I   AG
Sbjct: 147 RGDAIIASLAVTPQ--TRTKLDFTDPYYRTPARFVARKDAVIPEMRPEYLEGRKIGAVAG 204

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L   F           +   E + AA +    D   GD  +L       D  + 
Sbjct: 205 SAHEAYLKAMF----TDAELHSYPNAEALRAALKRGEVDFIFGDAISLAFWINGTDSENC 260

Query: 214 -----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                   L        +  A+ +G+      ++W  +
Sbjct: 261 CAFAGAPFLESRYFGEGVGIAVRKGNDTLRQALNWALF 298


>gi|307708124|ref|ZP_07644591.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615570|gb|EFN94776.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 215

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 26/211 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K +       +++        A          +L+ G+      F             
Sbjct: 1   MRKIYLSIFTSFLLMLGLVNVAQADE--------YLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 50  VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
           +     +  G+DV   + ++  +  +P  ++      +    AL S +ID++      T 
Sbjct: 53  IDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEGLVPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    +AF    Y      ++ K    ++   L   +      +   + L D     +
Sbjct: 110 ERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLDDFNGAKIT-SQQGVYLYDLISQIS 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                       ++  A  A   DAY  +  
Sbjct: 167 GAKKETAMGDFAQMRQALEAGVIDAYVSERP 197


>gi|306843052|ref|ZP_07475676.1| extracellular solute-binding protein [Brucella sp. BO2]
 gi|306286766|gb|EFM58314.1| extracellular solute-binding protein [Brucella sp. BO2]
          Length = 256

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 20/239 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     L  + ++  +    N G      +  N +  GFD+D    +   +      +++
Sbjct: 2   AHAGPTLDRVNEKKEMVVATNVGWPPQGFLNDNNELVGFDIDVANEIGKRLGVK---VRF 58

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                          + D+   +   T  R  +  + F  I Y+    +++HK    +SV
Sbjct: 59  ETPEWPTLTGGHWQGRYDVGVGSVTPTKAR--AQAIDFAGIYYYSPYVYVVHKDSKAASV 116

Query: 141 SQLSGASICVQAGTTTELTL-------ADYFKAHNMKYHPIVFERVEEI---DAAYRAH- 189
           + L G  I V+ GT +E  +       A+          P       +        R   
Sbjct: 117 ADLKGKVIGVETGTASEDFINHRLEIDAENMPPIKYDLEPGEVRTFPDSMMPFDDLRLGD 176

Query: 190 --RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             R DA         AL          ++      +SP      +GD EW   +     
Sbjct: 177 GVRLDAIVT--PEQTALNAIKSGYPVRILSGSYPFRSPAVIIAEKGDPEWTAKIGEIIK 233


>gi|302337439|ref|YP_003802645.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634624|gb|ADK80051.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 285

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 78/264 (29%), Gaps = 31/264 (11%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNAS-----------------ILGDIKKRGFLKCGI 40
           M K     F      +  F T  S +AS                  +  I   G L    
Sbjct: 1   MKKKNAIIFCLFALALGFFLTGCSQSASKTAATGSSAMAAGGTQDAMDQIFADGKLVVAT 60

Query: 41  NTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
             G   FA      G+  G  ++  R  +  +  +     +          +L + Q+D+
Sbjct: 61  ELGTPPFAYKDPKTGEIDGLAIELARMFADELGVELEIRTF---EWAGIIPSLLTGQVDM 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           L+     T  R     + F           ++ K     S+S+L+     V   TTT   
Sbjct: 118 LTTCLTRTTARAG--KMIFIEPFVAVPAHALVRKGTF-HSLSELNNPD--VVLTTTTGGI 172

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
             +  +               +   A +  R DAY  D   L A         +  ++P+
Sbjct: 173 YEELAEKLFPNAQIKTNGTNADNAVALQTMRADAYLNDKLQLVASMEMYKD--QFELIPE 230

Query: 220 IISKSPLAPAIIQGDTEWYNIVSW 243
            I+   LA A      +  N  + 
Sbjct: 231 PIAWDSLAFATRFDSPKLANSANM 254


>gi|291003747|ref|ZP_06561720.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 791

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 91/272 (33%), Gaps = 28/272 (10%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G++     +     +G   GFDVDF RAL+  +   P    ++  + ++    L+++
Sbjct: 39  LTVGVDLSYPPYNYFD-SGRPSGFDVDFDRALAQRMGLRPE---FVDTSFEQLIAGLKAQ 94

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAG 153
           + D+       T  R     + F P  +  G   ++     +     ++L G  + V  G
Sbjct: 95  RYDVAISALYITPDRAK--EIDFVP-YFTTGNSLVVRTDSPLRPAGPAELCGQRVGVIKG 151

Query: 154 TTTELTLADYFKAHN-----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
                 L +   A              F        A  A + D      +A+    + +
Sbjct: 152 GQIVTQLREQAGAACVREGRPGIDVREFASDPVATQALIAGQLD-VQATDAAVAKAAVDH 210

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSK 266
                 +    ++  + +   + +G+      V+     +  + E    + + N+     
Sbjct: 211 SGSGLMITSSGLLYPTSVGIGLARGNPALKEQVTKAFEELKASGEYDRLLQRYNLR---- 266

Query: 267 DTTNPDVQRF-LGIDKSSNIGEALGLTKDWTY 297
              +P++ R  LG     +     G   DW Y
Sbjct: 267 -PVDPELVRANLGTPGEDD---DFGF--DWAY 292


>gi|255659863|ref|ZP_05405272.1| amino acid ABC transporter, amino acid-binding protein [Mitsuokella
           multacida DSM 20544]
 gi|260847942|gb|EEX67949.1| amino acid ABC transporter, amino acid-binding protein [Mitsuokella
           multacida DSM 20544]
          Length = 279

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 82/268 (30%), Gaps = 7/268 (2%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            + ++ L +L      T+ S     K    +       +  ++    +G   G+DV+  +
Sbjct: 14  VLMVVGLGVLAGCGSDTDDSSASVNKDAKTVVVATRGTVKPYSYTDDDGKLTGYDVEILK 73

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +     D      + P+     F+A+ S Q+D+++     +  R+           Y  
Sbjct: 74  EIEKR--DPSLHFTFKPMAVDAAFVAMDSSQVDMIANQMRHSPARDEKYIFPKELNNYTV 131

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VEEIDA 184
            +  +        S+  L G  + V   +     +  + +  +     +  ++   E   
Sbjct: 132 RKLVVPKDDDATKSLDDLKGKKVAVTTNSEFADLVKKFNETADTPIEIVYTDKGPSETMN 191

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                R  A               D+      +   ++K P    + + D      V+  
Sbjct: 192 LVATGRAQA--AGEYEYIVSVAQKDKNLPIKTVGPTLTKVPTYFLLRKDDE--MQKVADK 247

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPD 272
             A + +     T K +++        +
Sbjct: 248 IDAALKSMREDGTLKALSEKYLGADYTE 275


>gi|116668123|pdb|2IEE|A Chain A, Crystal Structure Of Yckb_bacsu From Bacillus Subtilis.
           Northeast Structural Genomics Consortium Target Sr574.
 gi|116668124|pdb|2IEE|B Chain B, Crystal Structure Of Yckb_bacsu From Bacillus Subtilis.
           Northeast Structural Genomics Consortium Target Sr574
          Length = 271

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 61/230 (26%), Gaps = 11/230 (4%)

Query: 21  STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN---GDWKGFDVDFCRALSSAIFDDPS 76
           + +       IK +G +    +  L   +    +       G++V+  R  +  +     
Sbjct: 7   ADSKDTGWEQIKDKGKIVVATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKRLG---L 63

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K+++          A+ S Q+D  + + D T  RE     +      +           G
Sbjct: 64  KVEFKEXGIDGXLTAVNSGQVDAAANDIDVTKDREEKFAFSTPYKYSYGTAIVRKDDLSG 123

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I ++  L G      A T       +  + +  K         E+        R D    
Sbjct: 124 IKTLKDLKGKKAAGAATTVY----XEVARKYGAKEVIYDNATNEQYLKDVANGRTDVILN 179

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D              +  +        +  A    + +       +    
Sbjct: 180 DYYLQTLALAAFPDLNITIHPDIKYXPNKQALVXKKSNAALQKKXNEALK 229


>gi|229494909|ref|ZP_04388660.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rhodococcus erythropolis SK121]
 gi|229318133|gb|EEN84003.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rhodococcus erythropolis SK121]
          Length = 482

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 72/259 (27%), Gaps = 27/259 (10%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
                 +     F     +G   G D+D   A++        K+    L       A+Q+
Sbjct: 39  TYTIATDLTFAPFEFENEDGKLVGIDIDLLNAIAED---QGFKVDIKQLGFDAALQAVQA 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAG 153
            Q D +      T  R+      F    +  G    ++     + S   L G  + V+ G
Sbjct: 96  GQADGVIAGMSITDARK--QVFDFSDPYFESGVQMAVLETDNDVKSYEDLRGKRVAVKNG 153

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T                +  + F     +    R     A   D   L          + 
Sbjct: 154 TEGASFAESI--KDQYGFTTVYFADSASMYDEVRTGNSVAVFDDYPVLAYGITQ---GNG 208

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
              + +    +    A+ +G                 AE L +    +  +  D    ++
Sbjct: 209 LKTVTEKEVGASYGFAVNKGQ---------------NAELLQMFNAGLQNLRDDGQYDEI 253

Query: 274 -QRFLGIDKSSNIGEALGL 291
              +LG   S++    +GL
Sbjct: 254 VSTYLGQGASTSDNSIIGL 272


>gi|254254087|ref|ZP_04947404.1| extracellular solute-binding protein [Burkholderia dolosa AUO158]
 gi|124898732|gb|EAY70575.1| extracellular solute-binding protein [Burkholderia dolosa AUO158]
          Length = 317

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  GI   L   +          GFD D  + ++  +      ++ + L   +  LAL
Sbjct: 68  GTLTIGIAPSLPPISSYATDARTVIGFDADVGQLVADTLGRK---LKIVALAWADWPLAL 124

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
           +S ++D +  N   T  R+      F      D  GF +     I S      ++G  I 
Sbjct: 125 ESGKVDAVISNVTVTEERKR--KFDFS-TYRKDQVGFYVRNDSPIRSIREPKDVAGLRIV 181

Query: 150 VQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYALK 205
             AGT  E  L  + + +      P+  +  ++      A ++ R DA     S L    
Sbjct: 182 TDAGTNQEKILLAWDRDNVAHGLKPVQVQYYDDQAMRIVAVQSGRADAVFSVNSVLAYQS 241

Query: 206 LTNDR 210
               +
Sbjct: 242 AQQRK 246


>gi|308188119|ref|YP_003932250.1| cyclohexadienyl dehydratase, putative [Pantoea vagans C9-1]
 gi|308058629|gb|ADO10801.1| cyclohexadienyl dehydratase, putative [Pantoea vagans C9-1]
          Length = 254

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 10/240 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +      S L  +     LK         ++ ++ +G ++G D+    AL++++    +K
Sbjct: 12  SGAVHAQSHLDTVLSSKTLKVCTTGDYKPYSYLRPDGQYEGLDISMANALATSLG---AK 68

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++++  + K       +KQ DI       TL R+ +   A                K+  
Sbjct: 69  VEWVQTSWKNLMPDFLAKQCDIAVGGVSVTLKRQQTAWFAQPLDVDGKIPLVRCSDKERF 128

Query: 138 SSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            ++ QL      +   AG T E  +  +           +F     I      ++ D   
Sbjct: 129 QTIEQLNRPDVRLIEPAGGTNEAFVHSHLPEA----SLTLFHDNVTIFQQLVDNKADVMI 184

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S     +              +      A  I + D  W   V    +      E  
Sbjct: 185 TDASEARFQQQHYPTLCAINPDKPLQYGE-KAYMIPRDDIRWKLYVDQWVHLSTATGEYR 243


>gi|237667836|ref|ZP_04527820.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|237656184|gb|EEP53740.1| extracellular solute-binding protein, family 3 [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 282

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 83/270 (30%), Gaps = 36/270 (13%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE------ 49
           M +        +SI  L IL     S +A    + +K   LK G+      F        
Sbjct: 1   MKRLRKIISVVLSISMLSILGGCGKSNSAGSSDNGEK--VLKVGMECAYAPFNWTQTDDS 58

Query: 50  -----VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
                +  N ++  G+DV   + ++  +      +Q   +        + S +ID+    
Sbjct: 59  NGAIKIDGNNEYAYGYDVMMAKKIADKLGYK---LQINKMEWDGLCPGVSSGKIDVSIAG 115

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTL 160
              T  R     + F  + Y      +  K    +   +V  L GA+   Q  T     L
Sbjct: 116 QSITPER--LESVDFSDVYYKADIVALTKKGTAYENAKNVEDLKGAACTSQLNTVWYDML 173

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHV 215
               +A          + V  +  A  + + D  T D     A   +N         +  
Sbjct: 174 DQIPEAKKQA----AIDTVPAMIVALNSGKVDVVTTDKPTAMAAAYSNKDLVLLYFKDGK 229

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                     +  AI +G+TE    ++   
Sbjct: 230 GFNASDEDVNMGIAIKKGNTELKEKINAAL 259


>gi|296126600|ref|YP_003633852.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
 gi|296018416|gb|ADG71653.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
          Length = 253

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 87/243 (35%), Gaps = 16/243 (6%)

Query: 16  FFTSFSTNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
           F +  +++ +   +I      ++  GI      F  + +NG+  GFD D    +S     
Sbjct: 14  FVSCTNSSNNTASNIDNLNNRYINVGIYVYDYPFGYI-SNGNIGGFDYDLMNEISR---I 69

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMH 132
              K+ + P+  +E   AL+S +ID++      T  R+    + F    Y       +  
Sbjct: 70  SGLKMNFNPMKFEELMSALESHKIDVIIAGMTVTEERKEL--VNFSDKYYTTSQAVIVEK 127

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I+    L G ++ V  GT     +AD   +     +   F+    I  A +  + D
Sbjct: 128 SNTNINKEEDLIGKNVGVIIGT-----VADSMISKIDAINIERFDTGSSIILALKVRKVD 182

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           A   D +        ++       +         A A  + DT   + V+ T   ++T+ 
Sbjct: 183 AAVFDKTTCEHFAAYDNDIKIVQKIKFPD--EDYAIAFRKEDTNLLDTVNKTLKEIMTSS 240

Query: 253 ELG 255
              
Sbjct: 241 FYD 243


>gi|226307850|ref|YP_002767810.1| glutamine ABC transporter glutamine-binding/permease protein
           [Rhodococcus erythropolis PR4]
 gi|226186967|dbj|BAH35071.1| putative glutamine ABC transporter glutamine-binding/permease
           protein [Rhodococcus erythropolis PR4]
          Length = 482

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 72/259 (27%), Gaps = 27/259 (10%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
                 +     F     +G   G D+D   A++        K+    L       A+Q+
Sbjct: 39  TYTIATDLTFAPFEFENEDGKLVGIDIDLLNAIAED---QGFKVDIKQLGFDAALQAVQA 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAG 153
            Q D +      T  R+      F    +  G    ++     + S   L G  + V+ G
Sbjct: 96  GQADGVIAGMSITDARK--QVFDFSDPYFESGVQMAVLETDNDVKSYEDLKGKRVAVKNG 153

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T                +  + F     +    R     A   D   L          + 
Sbjct: 154 TEGASFAESI--KDQYGFTTVYFADSASMYDEVRTGNSVAVFDDYPVLAYGITQ---GNG 208

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
              + +    +    A+ +G                 AE L +    +  +  D    ++
Sbjct: 209 LKTVTEKEVGASYGFAVNKGQ---------------NAELLQMFNAGLQNLRDDGQYDEI 253

Query: 274 -QRFLGIDKSSNIGEALGL 291
              +LG   S++    +GL
Sbjct: 254 VSTYLGQGASTSDNSIIGL 272


>gi|52424275|ref|YP_087412.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306327|gb|AAU36827.1| ArtI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 265

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 15/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +   +      F    A G+  GFDVD  +A+   I    +   +   +      +L++K
Sbjct: 47  ITFAMEPSYPPFELTNAQGEIIGFDVDVAKAICKEI---EANCNFKSQSFDALIPSLKAK 103

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D      D T  R     + F    Y     FI  K K   + +     +I VQ GTT
Sbjct: 104 RFDAAISAIDITETRAK--QVLFSDAYYDSSASFIAVKGKADLNSA----KNIGVQNGTT 157

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH- 214
            +       K    +Y P  +  +++     +  R D   GD + L  +       +   
Sbjct: 158 FQQYTVAEAK----QYSPKAYTSLQDAILDLKNGRIDIIFGDTAVLADMLAKEPELTFVG 213

Query: 215 -VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +       + L  A+ + D      ++    A+    E  
Sbjct: 214 DKVTNKKYFGNGLGIAVNKSDKALVENLNKGLAAIKANGEYQ 255


>gi|297516366|ref|ZP_06934752.1| glutamate and aspartate transporter subunit [Escherichia coli OP50]
          Length = 153

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+         +++
Sbjct: 30  GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   + R+      F    +  G   +  K   I  
Sbjct: 90  LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147

Query: 140 VSQLSG 145
            + L G
Sbjct: 148 FADLKG 153


>gi|206577271|ref|YP_002237019.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288933973|ref|YP_003438032.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|206566329|gb|ACI08105.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288888702|gb|ADC57020.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 267

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 82/272 (30%), Gaps = 20/272 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K      L L +    S  T A+ L      G  K G+      F    +N +  G D 
Sbjct: 6   KKISRRVALTLAVSACFSPVTQAAEL---LTEGVFKVGMEVTYPPFESYDSNNNIVGLDP 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF   ++  +   P  I     +          K+ D +      T  R+          
Sbjct: 63  DFAALIAQHLQAKPQLIDTKFTSLILGI----GKKYDAVISGMYVTPERQKQAD---AIP 115

Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPI 174
               G   I  K   +   +  +L G  + +QAGTT   +L         K         
Sbjct: 116 YALSGASIIALKGGAVQPKTEDELCGVKVGLQAGTTWVTSLKKHSDEWCLKNGKPAITIQ 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F    E   A  +    A      A   + +   R    +    ++   PL   + +G+
Sbjct: 176 EFPTAPEASQALLSKNIGAQLEIAPA-AQIIVDKSRGRLGISSTRLVYPLPLGIYVAKGN 234

Query: 235 TEWYNIVSWTHYAMVTAEELG--ITQKNINQV 264
           TE    +  T  A+    +    I + N+  +
Sbjct: 235 TELAEAIKATLAALKANGQYAALIKKYNLESI 266


>gi|329120635|ref|ZP_08249298.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327460859|gb|EGF07193.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 275

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 75/236 (31%), Gaps = 11/236 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +    AS +   ++        +        ++      GF  D    L++A   +  K
Sbjct: 22  GAAQNAASGVQGAQQ--EYIVATDAAYAPLEYMEGE-QVVGFSRDI---LAAAGEKEGIK 75

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKG 136
             ++    +  F  +Q    D+   +   T  R+    + F    +   Q  +   K   
Sbjct: 76  FNFVNTPFEGIFANVQKGDSDVALASITITDERK--QIVDFTDPYFEATQMIVTADKGSD 133

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S + L   S  VQ GTT +L L D             FE +        A   DA  G
Sbjct: 134 IKSFADLKTRSASVQNGTTADLILQDL--QGKDSKLIRRFENMPLAFKELAAGGVDATVG 191

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           D   +      N   + H+ +     K     A+ +G ++          A + A+
Sbjct: 192 DNGVVQYFVANNPGVNYHMFVDPSFPKEFYGFALKKGRSDGLREKINKGLAAIKAD 247


>gi|325697553|gb|EGD39439.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 521

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 87/290 (30%), Gaps = 29/290 (10%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIF 72
             +  I+   +L+ G+      F       +NG  K         G+DV   + ++  + 
Sbjct: 17  GTVQVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVKIEGTNQYANGYDVQIAKKIAQEMG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            +P  ++    +      AL S +ID++      T  R+  +   F    Y      ++ 
Sbjct: 77  KEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTAERKKEIA--FSNSYYTSEPVLLVR 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K    +S   L          +   + L +                  ++  A  +   D
Sbjct: 132 KDGKYASAKTLEDFKDAKVT-SQQGVYLYNLIDQLPGAKKETAMGDFAQMRQALESGVID 190

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTE----WYNIVSWTH 245
            Y  +       +  N                    +A  + + D+        I   T 
Sbjct: 191 GYISERPEALTAETANSNFKMIQFEKGFEVGEEDASIAIGMRKDDSRIEQANVAIAKITT 250

Query: 246 YAMVTAEELGITQKNIN---QVSKDTTNPDVQRFLGIDKSSNI-GEALGL 291
              V   +  I ++ ++   + +K++    V + L  +    + G  L L
Sbjct: 251 NDQVKLMDEMIQKQPVDTDSEAAKESFFSQVAKILAENWPQFLRGAGLTL 300


>gi|293381104|ref|ZP_06627121.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|290922316|gb|EFD99301.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
          Length = 526

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 82/289 (28%), Gaps = 29/289 (10%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-----------VKANGDWK 57
           +  L+ LF     ++       K  G LK G+      +             +  +  + 
Sbjct: 1   MSVLLSLFIGFSLSSNQTQAAKKDSGTLKIGMEANYPPYNWTQPTKANGAVPIDGSNSYA 60

Query: 58  -GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DV   + +   +      +            AL S +ID++      T  R     +
Sbjct: 61  NGYDVQIAKIIGKRLHKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSPTAERRK--AI 115

Query: 117 AFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            F           I +   K      ++   GA +  Q GT     +     A       
Sbjct: 116 NFSEPYRKSTFVVITNKASKYSNAKKLTDFKGAKLTAQQGTLHYDLIKQLKGAKREP--- 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAP 228
                   +  +  +   D Y  +     +    N        ++          S  + 
Sbjct: 173 -AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMAGFKVDHDDSVTSI 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
            + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 232 GVKKGNTKLLNEVNATLRTISNKKRDQLMSQAIKEQPKAGNETKKENWL 280


>gi|126740698|ref|ZP_01756384.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseobacter sp. SK209-2-6]
 gi|126718213|gb|EBA14929.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseobacter sp. SK209-2-6]
          Length = 235

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 32/250 (12%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++   L +     F+              ++ G       +  +  NG+  GF+ +
Sbjct: 2   KSLIMTTAALALTAGMGFAE------------TVRLGTEGAYPPYNFLNDNGEVDGFERE 49

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L           +++  +       L S   D +      T  R+    ++F    
Sbjct: 50  LGDELCKRA---ELTCEWVTNDWDSIIPNLTSGNYDAIIAGMSITEERKEV--VSFTQGY 104

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                         +S+   +  A +  QA T     +A+           + F   +E 
Sbjct: 105 TQPSPS----AFAALSADIDVKSAVVAAQASTIQSAHVAE------SGATLVEFPTPDET 154

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            AA ++   DA   D   L  +       ++ V L D+     +  A  Q D E  +   
Sbjct: 155 IAAVKSGEADAVLSDKDFLNPIVAE----TDLVFLGDVFLGGGIGMAFRQSDDELRSKFD 210

Query: 243 WTHYAMVTAE 252
               A + A+
Sbjct: 211 AAI-ASMKAD 219


>gi|300716299|ref|YP_003741102.1| ABC polar amino acid family transporter, periplasmic ligand binding
           protein [Erwinia billingiae Eb661]
 gi|299062135|emb|CAX59251.1| ABC polar amino acid family transporter, periplasmic ligand binding
           protein [Erwinia billingiae Eb661]
          Length = 296

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 89/271 (32%), Gaps = 27/271 (9%)

Query: 1   MY-KDFFVSILCLIILFFTSF-STNASIL------------GDIKKRGFLKCGINTGLVG 46
           M  K   +S +    L   S  +  A                 I+    L    +     
Sbjct: 1   MRIKTLLLSAVTACSLGAFSLYAQAADTPLAMDAALHAQLPDKIRSSKTLNLVTDAHYPP 60

Query: 47  F-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
             +  + N    GF+ D   AL   +      ++ + ++       ++S + D+      
Sbjct: 61  CESFAEDNKTMVGFEPDLWNALGEVLG---VTVKPVSIDFAGLIPGVKSGRFDVAMECIS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYF 164
            +L RE    + F    Y   + + +  +  I S    L G  + +Q GT  E  + + +
Sbjct: 118 DSLEREK--QVTFVNYAYATSEVYTLATETAIKSDPLTLCGLKVGLQTGTDFEHAINEIY 175

Query: 165 KAH-----NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
             +           +     + +  A  + R D    D +++  +K    +P   V +P 
Sbjct: 176 SPNCSKNGKPDIQKVTLASADAVLLALYSGRVDFVLNDAASVDDIKKKAPKPIRTVSMP- 234

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           ++ K  L   +   + +  +++      ++ 
Sbjct: 235 LMPKYYLGIVVAHENKQLADVLLKAMNVLIA 265


>gi|86748013|ref|YP_484509.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           HaA2]
 gi|86571041|gb|ABD05598.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris HaA2]
          Length = 290

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 65/219 (29%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F    A+G+  GF+VD  RAL   +              +    AL S
Sbjct: 60  VIRFLTETDYPPFNFTGADGNPAGFNVDLARALCEEM---KVTCTVQMRRFETLLDALAS 116

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D +  +   T        + F    Y     F+  K   +       L G  +   A
Sbjct: 117 NRGDAIIASLAVTPQ--TRGKVDFTDPYYRAPGRFVARKDAVLPEIRPEYLEGKKVGAIA 174

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E  L   F           +   E + AA R    D   GD  +L       D  +
Sbjct: 175 GSAHEAYLKAMF----TDAELHSYPNDEALRAALRRGEVDFIFGDAISLAFWINGTDSEN 230

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                             +  A+ +G+      ++W  +
Sbjct: 231 CCAFSGGPFTESRYFGEGVGIAVRKGNDLLRQSLNWALF 269


>gi|291087042|ref|ZP_06345221.2| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Clostridium sp. M62/1]
 gi|291076280|gb|EFE13644.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Clostridium sp. M62/1]
          Length = 329

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/241 (10%), Positives = 76/241 (31%), Gaps = 17/241 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSAIFDDP 75
           + + +   L  IK+ G +    +     F          ++ G D++  + ++  +  + 
Sbjct: 74  ADAASEGRLAKIKESGKIVMATSPDFAPFEFKDISSGKMEYVGCDIELGKYIAEKLGVE- 132

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG------F 129
             ++   ++      A+ S  +D+      +T  R  S+GL+ +       Q        
Sbjct: 133 --LEIQAMDFAAVQAAVTSGSVDMAISGFSYTEDRAQSMGLSNKYDYDRGEQPSTQGILI 190

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +      +++    +G  +  Q G   +  + +      M+        V +     +  
Sbjct: 191 LAEDADTLNTAESFAGKKVAAQNGALQQSLVQEQLPDAQME----TITNVNDGVMMLQTD 246

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           + DA     S    +              +      +  A+ +G+     +++     ++
Sbjct: 247 KVDAVAVATSVGETMIANYPELQFSDFWFETDDDGNV-IAVPKGEEALLEVINEAVDEVM 305

Query: 250 T 250
            
Sbjct: 306 E 306


>gi|171319587|ref|ZP_02908684.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171095198|gb|EDT40193.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 317

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L  G+   L    +         GFD D  + +S ++      ++ +PL   +  L
Sbjct: 66  EAGTLTIGVAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRK---LKIVPLAWADWPL 122

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           AL+S ++D +  N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 123 ALESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQSIREPKDVAGLR 179

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYA 203
           I   AGT  E  L  + + +      P+  +  ++      A ++ R DA     S L  
Sbjct: 180 IVTDAGTNQEKILLAWDRENVAHGLKPVQVQYYDDQAMRIVAVQSGRADAVFSVNSVLAY 239

Query: 204 LKLTNDR 210
                 +
Sbjct: 240 QSAQQGK 246


>gi|88801185|ref|ZP_01116728.1| general L-amino ABC transporter binding protein [Reinekea sp.
          MED297]
 gi|88776088|gb|EAR07320.1| general L-amino ABC transporter binding protein [Reinekea sp.
          MED297]
          Length = 94

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1  MYKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
          M K   +S L   L      S +    +L  + ++GF++CG++ GL GF+    NG+W G
Sbjct: 6  MIKKAVLSTLGVALTSSLMISNAQAGEVLDGVLEKGFVQCGVSQGLPGFSSTDENGNWSG 65

Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNA 85
           DVD+CRA+++AIF D   ++Y PL+A
Sbjct: 66 LDVDYCRAVAAAIFGDADAVKYTPLSA 92


>gi|115358610|ref|YP_775748.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115283898|gb|ABI89414.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 317

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L  G+   L    +         GFD D  + +S ++      ++ +PL   +  L
Sbjct: 66  EAGTLTIGVAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRK---LKIVPLAWADWPL 122

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           AL+S ++D +  N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 123 ALESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQSIREPKDVAGLR 179

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYA 203
           I   AGT  E  L  + + +      P+  +  ++      A ++ R DA     S L  
Sbjct: 180 IVTDAGTNQEKILLAWDRENVAHGLKPVQVQYYDDQAMRIVAVQSGRADAVFSVNSVLAY 239

Query: 204 LKLTNDR 210
                 +
Sbjct: 240 QSAQQGK 246


>gi|229494745|ref|ZP_04388503.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodococcus erythropolis SK121]
 gi|229318412|gb|EEN84275.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodococcus erythropolis SK121]
          Length = 605

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 12/227 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + S L  IK  G +  G          V +   + G+D +  +A++  +     K++++ 
Sbjct: 81  DTSKLNLIK-PGVITVGTLGDAPPSICVNSENQYTGYDNELLKAVADKLG---LKVEFVG 136

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    +  ++ D+   ++  T   +    + F     F     ++     I+    
Sbjct: 137 TEFAGLLAQVAGRRFDV--GSSSITTTDDRRNTVGFTNGYDFGYFSLVVPNGSPITGFGD 194

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L  +        T    + D +  + +K  P+ F       A  ++ + DA+        
Sbjct: 195 LDASKRIGVVQGT----VQDDYVVNTLKLDPVKFPDYATAYANLKSGQIDAWVAPSQQAE 250

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                       +I       + +  A+ + +    + ++    A++
Sbjct: 251 G--AIAPGDPTSIIQNTFSVNNFVGWAVNKENQPLIDALNSGLDAVI 295


>gi|254441210|ref|ZP_05054703.1| Bacterial extracellular solute-binding protein, family 3
           [Octadecabacter antarcticus 307]
 gi|198251288|gb|EDY75603.1| Bacterial extracellular solute-binding protein, family 3
           [Octadecabacter antarcticus 307]
          Length = 246

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 69/249 (27%), Gaps = 24/249 (9%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       + + L      + +  A           ++ G       +  +   G+  GF
Sbjct: 1   MKNLILTTAAVALTSTMALTTAAMADGHS------VVRMGTEGAYAPWNFINDAGEVDGF 54

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +    L +         +++          L S   D +      T  R+    + F 
Sbjct: 55  ERELGDELCARA---ELTCEWVTNEWDSIIPNLVSGNYDTIIAGMSVTDERDEI--IDFT 109

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                            ++     +   +  Q GT     +AD        +  + F   
Sbjct: 110 MAYTPADPT----SFLALAMDVDPAAGVVAAQTGTIQAAYIAD------QGWTLVEFATP 159

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE  AA R    DA   D S L A               +I+    +   I + DTE  +
Sbjct: 160 EETLAAVRGGEADAVFADKSFLAAALEGQSELMMLEQ--EIMLGGGVGMGIRESDTELRD 217

Query: 240 IVSWTHYAM 248
             +    +M
Sbjct: 218 TFNAAIQSM 226


>gi|191638338|ref|YP_001987504.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus casei BL23]
 gi|227535173|ref|ZP_03965222.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631577|ref|ZP_04674608.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|190712640|emb|CAQ66646.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus casei BL23]
 gi|227187218|gb|EEI67285.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239526042|gb|EEQ65043.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382365|gb|AEA53841.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus casei LC2W]
 gi|327385566|gb|AEA57040.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus casei BD-II]
          Length = 485

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 72/232 (31%), Gaps = 21/232 (9%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
               L  ++++G L  G +     +             G DV+  R ++  +      + 
Sbjct: 28  ADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNGKNQVVGMDVEVARKIAKDLGVK---LV 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GI 137
              +N     +ALQ+ ++D++      T  R     + F    Y  GQ  +++K      
Sbjct: 85  IKQMNFNSLLVALQTGKVDMVLAAMSPTNARRK--SVDFSNTYYKSGQDILVNKTDAKIY 142

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                 +   + VQ G+  E       K        +   +V ++  A + H+      +
Sbjct: 143 KDHKSFANKKVGVQNGSLQETLAKTQMK----TSSTLGLTKVTDLILALKTHKVAGVVAE 198

Query: 198 ISALYALKLTNDR----PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   A    +D     P    +  D +     A    +         + + 
Sbjct: 199 GAVAKAYTSNDDSLVEIPGHFNLSSDTVGT---AIGFAKNSDSLVAAANKSL 247


>gi|257784234|ref|YP_003179451.1| extracellular solute-binding protein family 3 [Atopobium parvulum
           DSM 20469]
 gi|257472741|gb|ACV50860.1| extracellular solute-binding protein family 3 [Atopobium parvulum
           DSM 20469]
          Length = 283

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 75/256 (29%), Gaps = 21/256 (8%)

Query: 3   KDFFVSILCLIILFFTSFS------TNASILGDIKK------RGFLKCGINTGLVGFAEV 50
           K   V  +   ++   + S         S     +       +G L      G   F   
Sbjct: 15  KGVAVVSMACALMGLIACSSPKQETAQQSTTSQSESGYTLVTKGHLTVVAELGFQPFEYF 74

Query: 51  KANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           + N     GFDVD    ++  +  + + +     +     +  Q  + D+       T  
Sbjct: 75  EGNSTTPVGFDVDLITEIAKRLNLEVTYLPNQKFDTLVPTIK-QGGKADVAIAGITITDE 133

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R  S  + F        Q  ++      +  +    +   V    T+     D+ K +  
Sbjct: 134 R--SQEVDFTTSYLDSNQSLVVKSGSTETEQTLNDASKKIVVQTGTSG---EDWAKENLP 188

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               +  + V    A  +    DA   D+     L  T+   S+  I  +I +      A
Sbjct: 189 NATIVSVDDVAAAMAGVQTGLYDAMVIDLPVASNLISTSY--SDLTIAKEIPTGEQYGIA 246

Query: 230 IIQGDTEWYNIVSWTH 245
           + + +      ++   
Sbjct: 247 VSKDNPALTEAINKVL 262


>gi|95931098|ref|ZP_01313824.1| histidine kinase [Desulfuromonas acetoxidans DSM 684]
 gi|95132843|gb|EAT14516.1| histidine kinase [Desulfuromonas acetoxidans DSM 684]
          Length = 1279

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 11/205 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F  +L +     T  + ++  +        ++ G++     F    ++   +G  
Sbjct: 1   MQRHVFFVLLLVFCSVVTVDAASSPSVQKEDYPRTIRVGVDANWPPFDYYDSDLKHQGIA 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D+   ++  +     +I+Y+P +  +     +  ++D+L      T  R     L F  
Sbjct: 61  SDYLDHVAKDLG---LEIEYVPGDWHDVLNMAKDGEVDML-ACAARTEQRTAY--LHFTQ 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +      + K    I  ++ L+G ++ +  G      L DYF +H  + + ++    
Sbjct: 115 PYIYIDSAVFVRKTDETIQRLADLAGKTVALPRG----NFLHDYFVSHYPQVNLVLTRSN 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYAL 204
           EE        + DA+ G+++     
Sbjct: 171 EEALELVALGKVDAHIGNLAVGNYF 195



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 63/218 (28%), Gaps = 13/218 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I +   ++ G  +    +      G ++G   D+   +            Y   +  E  
Sbjct: 273 ILEHPRVRVGTGSTWPPYDFR-EEGQYRGLARDYLDLIHKKTG---LTFDYSFTDTWESL 328

Query: 90  LA-LQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQLSGAS 147
              L ++QID+L                 F           FI    +GI  +  +    
Sbjct: 329 QLSLSNEQIDLLPAIYQHNA---AQSPFLFTTPYIQAREFLFIRDDHQGIDVLDDIRHHR 385

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             +  G+ T   +    + +      +  + + +   A    R D Y    SA+  +   
Sbjct: 386 AVMVKGSGTTPQI----RHNYPSVTILEVDTISQALDALMDDRADFYIDTYSAVNFVANK 441

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           N            +  + L+ A+ +   +   I+    
Sbjct: 442 NHFVGIRAAFAVDLVNTQLSMAVSRQQPQLLAILQAAL 479


>gi|260427211|ref|ZP_05781190.1| amino-acid ABC transporter, periplasmic binding protein
           [Citreicella sp. SE45]
 gi|260421703|gb|EEX14954.1| amino-acid ABC transporter, periplasmic binding protein
           [Citreicella sp. SE45]
          Length = 287

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 79/247 (31%), Gaps = 22/247 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F +     I+         A  L        L          F+ +  NG+  G+ ++ 
Sbjct: 20  HFMLGWGVAILALSLPHVAAAEEL--------LPICYREDTAPFSYLDDNGEPTGYTIEL 71

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C+ + +++  D   +Q + + A++RF  L     D+L   T  TL R       F   T+
Sbjct: 72  CKRVVASLNVD---LQMIAVTAEDRFDRLARGDCDLLCEATTVTLKRRK--QADFSFYTF 126

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----VFERV 179
             G  F+  K  G +  +   G       GTT E                +     FE  
Sbjct: 127 LTGAAFLYPKSTGDAGKTVNVGYL----KGTTVEAAARAGNIIGGSSGQYVLKEFEFESH 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWY 238
           EE   A        Y  D   L  +     R    + I    ++  P A A+  GD E  
Sbjct: 183 EEAQEALANGELQGYLADREILELMLEELPRMADAYQISKQSLTYEPYAIAVRLGDFETR 242

Query: 239 NIVSWTH 245
             V    
Sbjct: 243 LKVDTAL 249


>gi|302551652|ref|ZP_07303994.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces viridochromogenes DSM 40736]
 gi|302469270|gb|EFL32363.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces viridochromogenes DSM 40736]
          Length = 299

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 81/246 (32%), Gaps = 12/246 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S +    +LG ++  G ++ GI    + F  +  NG+  G   +  + +   +  D
Sbjct: 35  VATASSTKGGDLLGRLRAAGVVRLGIAGE-IPFGFIDKNGELTGEAPELAKVIFKRLGID 93

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             ++Q +P         L S+Q D+++        R     + F    Y     FI+ K 
Sbjct: 94  --RVQPVPTEFGSLIPGLNSQQFDVVAAGMYVNPER--CEQVIFSDPDYQMLDAFIVRKG 149

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               + S   +         G T    +    +A   +   ++         A  A R D
Sbjct: 150 NPKGLHSYKDVVAKKAKFATG-TGYAEIQYAVEAGYKESEILIVPDQVAGLNAVEAGRVD 208

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
            + G    +  +   + +         ++   P     A A    +T+  +  +     +
Sbjct: 209 VFAGTALTVREVVKKSAKAESTKPFAPLVEGKPHVDGGAFAFRPTETKLRDAFNVELSKL 268

Query: 249 VTAEEL 254
             + EL
Sbjct: 269 KKSGEL 274


>gi|241895501|ref|ZP_04782797.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
 gi|241871247|gb|EER74998.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Weissella paramesenteroides ATCC 33313]
          Length = 293

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 79/255 (30%), Gaps = 19/255 (7%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56
           M K      V  + ++            +  +   +  L+   +  L   +         
Sbjct: 11  MVKKKTGLIVGGITVVAAGLLVAGCGQKVSSNTTDKSTLEVATSGTLYPTSYHDPKTKKL 70

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+D++  RA++  +      +++  LN   +  A+++ ++D+ + +   +  R+    L
Sbjct: 71  TGYDIEIVRAVAKKMGRK---VEFKQLNVDGQLTAVKTGKVDMAANDIGISPQRKKEFTL 127

Query: 117 AFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                        ++ K    GI+S   + G     +AGT+    LA    A  + Y+ +
Sbjct: 128 --STPYKHSFNSIVVRKSDNSGINSWHDIKGKKAAGEAGTSY-QRLAKQLGAETINYNNV 184

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAI 230
                +      +  R D    D                     +        + +   +
Sbjct: 185 ---SNDVYLRDVKNGRTDFIMNDYYLQKLALKAVPNNGLKIKKDMYFKTKDDGAGVGILM 241

Query: 231 IQGDTEWYNIVSWTH 245
            + + +    V+   
Sbjct: 242 KKDNKKLAKQVNKAL 256


>gi|226309415|ref|YP_002769375.1| ABC transporter substrate-binding/permease protein [Rhodococcus
           erythropolis PR4]
 gi|226188532|dbj|BAH36636.1| putative ABC transporter substrate-binding/permease protein
           [Rhodococcus erythropolis PR4]
          Length = 594

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 12/227 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + S L  IK  G +  G          V +   + G+D +  +A++  +     K++++ 
Sbjct: 70  DTSKLNLIK-PGVITVGTLGDAPPSICVNSENQYTGYDNELLKAVADKLG---LKVEFVG 125

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    +  ++ D+   ++  T   +    + F     F     ++     I+    
Sbjct: 126 TEFAGLLAQVAGRRFDV--GSSSITTTDDRRNTVGFTNGYDFGYFSLVVPNGSPITGFGD 183

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L  +        T    + D +  + +K  P+ F       A  ++ + DA+        
Sbjct: 184 LDASKRIGVVQGT----VQDDYVVNTLKLDPVKFPDYATAYANLKSGQIDAWVAPSQQAE 239

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                       +I       + +  A+ + +    + ++    A++
Sbjct: 240 G--AIAPGDPTSIIQNTFSVNNFVGWAVNKENQPLIDALNSGLDAVI 284


>gi|84574975|emb|CAJ55342.1| periplasmic histidine-binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|84574979|emb|CAJ55344.1| periplasmic histidine-binding protein [Salmonella enterica subsp.
           enterica serovar Heidelberg]
          Length = 164

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 8/147 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G +     F    A G+  GFD+D  + L   I    ++  ++         +L++
Sbjct: 24  KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 80

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
           K+ID +  +   T  R     +AF    Y      ++ K   I  +V+ L G  + V  G
Sbjct: 81  KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVE 180
           TT E    +++    +    + ++  +
Sbjct: 139 TTQETFGNEHWAPKGI--EIVSYQGQD 163


>gi|301066392|ref|YP_003788415.1| amino acid ABC transporter permease/periplasmic protein
           [Lactobacillus casei str. Zhang]
 gi|300438799|gb|ADK18565.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei str. Zhang]
          Length = 485

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 72/232 (31%), Gaps = 21/232 (9%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
               L  ++++G L  G +     +             G DV+  R ++  +      + 
Sbjct: 28  ADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNGKNQVVGMDVEVARKIAKDLGVK---LV 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GI 137
              +N     +ALQ+ ++D++      T  R     + F    Y  GQ  +++K      
Sbjct: 85  IKQMNFNSLLVALQTGKVDMVLAAMSPTNARRK--SVDFSNTYYKSGQDILVNKTDAKIY 142

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                 +   + VQ G+  E       K        +   +V ++  A + H+      +
Sbjct: 143 KDHKSFANKKVGVQNGSLQETLAKTQMK----TSSTLGLTKVTDLILALKTHKVTGVVAE 198

Query: 198 ISALYALKLTNDR----PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   A    +D     P    +  D +     A    +         + + 
Sbjct: 199 GAVAKAYTSNDDSLVEIPGHFNLSSDTVGT---AIGFAKNSDSLVAAANKSL 247


>gi|167840327|ref|ZP_02467011.1| hypothetical protein Bpse38_26879 [Burkholderia thailandensis
           MSMB43]
          Length = 310

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + L+ ++      ++ + L   +  LAL+
Sbjct: 62  TLTVGIAPSQPPISAYATDAHTVVGFDADLAQLLADSLGRK---LKIVALAWADWPLALE 118

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 119 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIKEPRDVAGLRVIT 175

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +      P+  +  ++    + A ++ R DA     S L     
Sbjct: 176 DAGTNQEKILLEWDRENVAHGLKPVTVQYYDDHAVKNVALQSGRADAIFSVNSVLAYQAA 235

Query: 207 TN 208
             
Sbjct: 236 QQ 237


>gi|330819466|ref|YP_004348328.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
 gi|327371461|gb|AEA62816.1| extracellular solute-binding protein family 3 [Burkholderia
           gladioli BSR3]
          Length = 275

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 79/263 (30%), Gaps = 18/263 (6%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M++   +   +L L +    + +    +L  +K+ G L  G       F  +  NG   G
Sbjct: 1   MFRFSHWKSMLLALTLSVGAAAAHADDLLARVKQHGELVVGTEMQFAPFDFL-ENGQQAG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+ D    +   +     K++++ L  +     L + + D+++     T  R      AF
Sbjct: 60  FNKDLFAEVGKLL---AVKVRFVDLPWESVLPGLDAGKFDMVAGPLTVTKAR--MGRYAF 114

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      +       +   + ++G  +    G+     L  Y            + 
Sbjct: 115 TLPIADGTDALLKRAGDASLKQPADIAGKVVGAGKGSAQLDQLKAYVATLPKPPTVREYV 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236
              +  A   A R  A     S      +   RP+   ++          A  + +    
Sbjct: 175 DNNQAYADLAAGRLAAVA--NSLTNVAYVAKQRPAMFALVQPAFGAKVYFAYCMRKDADS 232

Query: 237 WYNIVSWTHYAMVTAEELGITQK 259
                  +  A   A  + + Q 
Sbjct: 233 ------ASLNAAFNAALVKLNQS 249


>gi|290510950|ref|ZP_06550319.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
 gi|289775943|gb|EFD83942.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 268

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 82/272 (30%), Gaps = 20/272 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K      L L +    S  T A+ L      G  K G+      F    +N +  G D 
Sbjct: 7   KKISRRVALTLAVSACFSPVTQAAEL---LTEGVFKVGMEVTYPPFESYDSNNNIVGLDP 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF   ++  +   P  I     +          K+ D +      T  R+          
Sbjct: 64  DFAALIAQHLQAKPQLIDTKFTSLILGI----GKKYDAVISGMYVTPERQKQAD---AIP 116

Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPI 174
               G   I  K   +   +  +L G  + +QAGTT   +L         K         
Sbjct: 117 YALSGASIIALKGGAVQPKTEDELCGVKVGLQAGTTWVTSLKKHSDEWCLKNGKPAITIQ 176

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F    E   A  +    A      A   + +   R    +    ++   PL   + +G+
Sbjct: 177 EFPTAPEASQALLSKNIGAQLEIAPA-AQIIVDKSRGRLGISSTRLVYPLPLGIYVAKGN 235

Query: 235 TEWYNIVSWTHYAMVTAEELG--ITQKNINQV 264
           TE    +  T  A+    +    I + N+  +
Sbjct: 236 TELAEAIKATLAALKANGQYAALIKKYNLESI 267


>gi|189426572|ref|YP_001953749.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter lovleyi SZ]
 gi|189422831|gb|ACD97229.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter lovleyi SZ]
          Length = 584

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 86/287 (29%), Gaps = 37/287 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + I     L     +              +  G +     +  +  NG   G++
Sbjct: 1   MLRPATLCIALFFCLLLPFSALARP----------IIVGGDRDYPPYEFLDPNGKPAGYN 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  RA++  +     ++++      E+   L+  +ID+L      +   + +  + F P
Sbjct: 51  VELTRAIAEVMG---LQVEFRLGGWSEQLRDLKEGRIDLLQG---ISWSEQRAAQIDFIP 104

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                       ++   +SS+++L G  + +         L+            +     
Sbjct: 105 PHTVVNHAIFARRESPVVSSLAELKGKKVTLHRDGIMHEQLSR----LGYGPDLVPTSTP 160

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +      A  CD Y           +   + +  V +   I+      A+ +G+ E   
Sbjct: 161 ADALRLLAAGGCD-YAVVAIVPGMYIIREYKLTNLVPVARSIAAQKYGHAVRKGNGELQA 219

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
            ++     +    +                     R+LG+ +   + 
Sbjct: 220 KLTEGLAILKKTGQYDEIHT---------------RWLGVLEPEGLA 251


>gi|325695641|gb|EGD37541.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 521

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 70/252 (27%), Gaps = 26/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K        L++   T+          I+   +L+ G+      F       +NG  K
Sbjct: 1   MKKLLLTLFTALLVALGTA--------QVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++    +      AL S +ID++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIAQEMGKEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +S   L          +   + L +     +
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLLVRKDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLS 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       ++  A  +   D Y  +       +  N                  A 
Sbjct: 167 GAKKETAMGDFAQMRQALESGVIDGYISERPEALTAETANSNFKMIQFEKGFEVGEEDAS 226

Query: 229 AIIQGDTEWYNI 240
             I    +   I
Sbjct: 227 IAIGMRKDDNRI 238


>gi|226315228|ref|YP_002775124.1| cyclohexadienyl dehydratase precursor [Brevibacillus brevis NBRC
           100599]
 gi|226098178|dbj|BAH46620.1| putative cyclohexadienyl dehydratase precursor [Brevibacillus
           brevis NBRC 100599]
          Length = 285

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 86/273 (31%), Gaps = 40/273 (14%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI------------------------LGDIKKR 33
           M K       S L   +L  +     A+                         L +I  R
Sbjct: 1   MKKITQTILASTLAATMLMTSGTGAFAATAVKPVQTVAAEAAKKPQVKKFESRLDEIIAR 60

Query: 34  GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G++  G       F  +      ++G+D+D  +  + ++  +    +++  +       L
Sbjct: 61  GYILVGTPGDYKPFTYLNPKTNQFEGYDIDAMKEFAKSLGVEA---RFVQTSWPTLMDDL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICV 150
            + + DI          R+    ++   I +          K    SV+ ++     I V
Sbjct: 118 LANKFDIAVGGVTRNTDRQKKAHMSDPYIMFGKAPLIRAEDKDKYKSVADINKPEVRIGV 177

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G T E  + ++           V +   +I     + + D    D   L AL  +   
Sbjct: 178 NPGGTNEKFVREHLTKA----TVTVEQNNLDIPGLVASGKYDVMITDT--LEALVYSKAD 231

Query: 211 PSEHVILPD-IISKSPLAPAIIQGDTEWYNIVS 242
              +  L D   +KS  A  I +GD  + N + 
Sbjct: 232 SRLYAALTDNPFTKSEKAYMIHRGDAIFANYLD 264


>gi|167842411|ref|ZP_02469095.1| extracellular solute-binding protein, family 3 [Burkholderia
           thailandensis MSMB43]
          Length = 267

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 66/201 (32%), Gaps = 21/201 (10%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSA 70
           L +L     S  A           L+ GI+      F    A G WKG+++D    L +A
Sbjct: 16  LFVLGLVPASHAAQP--------TLRVGIDAESYPPFFSKGAAGKWKGWEIDV---LDAA 64

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
                 + +   +       ALQ+++ID++  +   T  R+    + F    Y     F+
Sbjct: 65  CGKLNVRCELTDIAWDGLIPALQNRKIDVIWSSMTITGERQK--AIDFSRAYYESPTVFV 122

Query: 131 MHKKKGISSVSQ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             K               G  I V+AGT     L   FK          F++ +   A  
Sbjct: 123 GAKSDRRRVDCAVPASFKGRVIGVEAGTNFSAFLDSRFKQ---DAQIKAFDKFDNALADL 179

Query: 187 RAHRCDAYTGDISALYALKLT 207
            + R D          A   +
Sbjct: 180 ASGRVDYVQEGKGLFTAFLAS 200


>gi|162147152|ref|YP_001601613.1| putative inner membrane amino-acid ABC transporter permease
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785729|emb|CAP55300.1| putative inner membrane amino-acid ABC transporter permease protein
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 499

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 36  LKCGINTGL-VGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           L+   +    V F            G++ D  +A++  +       Q++  +       L
Sbjct: 23  LRWASDAEANVPFVFHDPADQSRLTGYEYDIAQAIARRLG---RPTQFVQNDWDGLIPGL 79

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQ 151
           Q    D++    + T   E   G+ F    Y   +   +   ++G+ +++ L G  +   
Sbjct: 80  QRGLYDMVIDGIEITPEHE--QGVLFSHPYYVTSERITVRRDQQGLDTLAALRGHVVGTL 137

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             TT E  L       +       +E         +  R DA   D +   AL      P
Sbjct: 138 KDTTAERMLQ-----ADPTIRIRSYEEETNAYTDLKNGRLDAVLLDGTI--ALYYGAPDP 190

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
               ++ D I +     A  QG+T   + V+     M+   EL
Sbjct: 191 G-LKLVGDPIGRVAYGVAFAQGNTTLRDQVNTALDGMIRDGEL 232


>gi|149201682|ref|ZP_01878656.1| extracellular solute-binding protein, family 3 [Roseovarius sp.
           TM1035]
 gi|149144730|gb|EDM32759.1| extracellular solute-binding protein, family 3 [Roseovarius sp.
           TM1035]
          Length = 307

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 80/229 (34%), Gaps = 18/229 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L  G++     F  V+ +   +GF+VD   A+      D   IQ+  ++      A
Sbjct: 76  EDGTLTVGMSGAYFPFTFVRQD-VLQGFEVDVMNAVGEVADLD---IQFETMSFSGLVGA 131

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150
           L + +ID ++     T  RE     AF      DG   +  K    I+ V  L G  + V
Sbjct: 132 LDAGRIDTIANQITITPEREA--KFAFTEPYVIDGAQVVTRKGNDAIAGVDDLRGKIVAV 189

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G+  E  L D   A   +     ++   E D A    R DA+  D  +   +   +  
Sbjct: 190 NLGSNFEQLLRDLPFAG--EVEIRTYDSNIEQDTAL--GRVDAFVMDRVSSAQVIKQSPL 245

Query: 211 PSEH--VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252
           P +       +I +  P        A+         ++         +E
Sbjct: 246 PLQLAGQPFSEIRNALPFRDDEDGRALRSKVDAALVVLRENGTLTEISE 294


>gi|116494831|ref|YP_806565.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei ATCC 334]
 gi|116104981|gb|ABJ70123.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
          Length = 485

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 72/232 (31%), Gaps = 21/232 (9%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
               L  ++++G L  G +     +             G DV+  R ++  +      + 
Sbjct: 28  ADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNGKNQVVGMDVEVARKIAKDLGVK---LV 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GI 137
              +N     +ALQ+ ++D++      T  R     + F    Y  GQ  +++K      
Sbjct: 85  IKQMNFNSLLVALQTGKVDMVLAAMSPTNARRK--SVDFSNTYYKSGQDILVNKTDAKIY 142

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                 +   + VQ G+  E       K        +   +V ++  A + H+      +
Sbjct: 143 KDHKSFANKKVGVQNGSLQETLAKTQMK----TSSTLGLTKVTDLILALKTHKVAGVVAE 198

Query: 198 ISALYALKLTNDR----PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   A    +D     P    +  D +     A    +         + + 
Sbjct: 199 GAVAKAYTSNDDSLVEIPGHFNLSSDTVGT---AIGFAKNSDSLVAAANKSL 247


>gi|325474447|gb|EGC77634.1| amino acid ABC transporter [Treponema denticola F0402]
          Length = 269

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 85/252 (33%), Gaps = 15/252 (5%)

Query: 3   KDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           K  F +++ L  L F+         S+N   L ++  R  +  G+N             +
Sbjct: 8   KAVFFAVILLFSLIFSCKKNEINEISSNDVSLAEVLVRSKIIVGVNAYNPPICFYNNKNE 67

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D    ++  +        +  +   E    + +  ID ++    ++  R  +  
Sbjct: 68  IIGFDIDVFEEIADIMNIKAE---FRTIVPTEVNELINTGAIDCIASGFSYSDER--NEA 122

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-AHNMKYHPI 174
                    +    +  + + I +++ L G  I  Q G+     + +       +     
Sbjct: 123 YELSQAYLRNSVVILTLRSRNIRTMADLKGKKIGAQKGSLGADLIKNNPDLMSQIHSLND 182

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E + +I    +    DA  GDIS +      N  P  + ++   I+      A  +G+
Sbjct: 183 SYENIPQILGDLKTLGIDACVGDISLMAEYL--NKEPGVYSLVEQAIALDSYVYAFKKGN 240

Query: 235 TEWYNIVSWTHY 246
                 +    Y
Sbjct: 241 KALKAEIERVLY 252


>gi|310766339|gb|ADP11289.1| cyclohexadienyl dehydratase, putative [Erwinia sp. Ejp617]
          Length = 285

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 76/252 (30%), Gaps = 6/252 (2%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              +    +++L     ++  S L  + +   L          +  ++ +  ++G D+  
Sbjct: 29  KMMMKTGTMVLLLLAGSASAQSHLDRVMQSKTLTVCTTGDYKPYTYLRPDSGYEGIDISL 88

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            ++L+  +  +   ++++P   K        KQ D+       TL R+ +   A    + 
Sbjct: 89  VQSLAKTLGAE---VKWVPTTWKTLTADFIGKQCDVALGGVSVTLKRQQTAWFASPLDSD 145

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                     K    +V QL+  ++ +            +  A   + +  +F     I 
Sbjct: 146 GKIPLVRCTDKNKYRTVKQLNKPTVRLIEPAGGTN--EAFAHAFLPQANLTLFHDNVTIF 203

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 + D    D S     +    +         +      A  + + D  W   V  
Sbjct: 204 QQLVDKKADVMVTDASEALYQQKRYPQLCAINPEKPLQYGE-KAWMLPRDDISWKMYVDQ 262

Query: 244 THYAMVTAEELG 255
             +    + E  
Sbjct: 263 WLHLGKASGEYQ 274


>gi|206577215|ref|YP_002239111.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|290512817|ref|ZP_06552182.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
 gi|206566273|gb|ACI08049.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|289774700|gb|EFD82703.1| polar amino acid transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 270

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 84/251 (33%), Gaps = 18/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++     +  L  L   S +     +  I  +G L  G     + F  VKA G   GFD+
Sbjct: 8   FRHVRTLMFALTALPLVSHAA----VETI-AKGQLTYGTAATFMPFEYVKA-GKLTGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   ALS  I   P+ +    +  K    ALQ K++DI++        R     + F P 
Sbjct: 62  DLINALSKEIQLTPAPMP---MEFKGLIPALQGKRLDIINSAMYVNPTRAE--QVDFVPY 116

Query: 122 TYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLA----DYFKAHNMKYHPIV 175
                +  +        +     L G +I V  G   E           +A     + + 
Sbjct: 117 LKIGSRVVVRKGNPANITGRDLSLCGKNIAVTLGGIEESQARADNQRCVEAKKPAINVMT 176

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    +   A    R DA         AL  T        +  +  + + +A A+ +GDT
Sbjct: 177 FPAATDSAVAVAQGRADAEFLSTPGTVAL-FTEKAGMFEAVGAEFEANTHIAFAVRKGDT 235

Query: 236 EWYNIVSWTHY 246
               ++     
Sbjct: 236 ATQALLEQGLQ 246


>gi|294084531|ref|YP_003551289.1| putative extracellular solute-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664104|gb|ADE39205.1| putative extracellular solute-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 278

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 58/298 (19%), Positives = 107/298 (35%), Gaps = 38/298 (12%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCR 65
            + +  I L     +  A  +  IK RG L+ G+      +++  A G W  G  V    
Sbjct: 13  SATVATIGLSGVMPAFAAGSMSSIKSRGSLRVGVTQAPPWYSKDPATGKWTSGVGVSAGM 72

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+++A+  +   ++   +       ALQS +ID +    D T  R+ +      P+  F 
Sbjct: 73  AMAAALGVEFEPVE---VTWGTAVAALQSNKID-IMFVLDATAKRKEAADFPVSPL-LFY 127

Query: 126 GQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
               +  +   +SS   L+  G  I V   T+ +  L +    +        +    E  
Sbjct: 128 SLAVMAREDLDVSSWQDLNKAGIKISVPQATSMDAFLTE----NTGNADIQRYPGNTEAI 183

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AA+++ R DA       L A +    R    +I+P     +P + A+ +GDTE+ N V  
Sbjct: 184 AAFQSGRVDAVCLFHPPLIAARKRLGRGK--IIVPTPTKSNPTSAAVRKGDTEFVNFVDG 241

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
              +   +                     +Q +       +     GL       I++
Sbjct: 242 QLKSWYES-------------------RQIQTW-----YEDFLSGFGLDPKAAPAIVK 275


>gi|260665023|ref|ZP_05865873.1| ABC transporter permease component [Lactobacillus jensenii
           SJ-7A-US]
 gi|260561077|gb|EEX27051.1| ABC transporter permease component [Lactobacillus jensenii
           SJ-7A-US]
          Length = 534

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 87/300 (29%), Gaps = 30/300 (10%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------ 53
           M  K+ ++ IL  ++     F  N   +   K  G L+ G+      +   + N      
Sbjct: 1   MKSKNTWLVILAFLMASIGFFGNNNQEVQAAKSNGVLRIGLEANYPPYNWTQTNSSNGAI 60

Query: 54  ---GDWK---GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              G      G+DV               K+  +         AL S +ID++      T
Sbjct: 61  PIEGSKTYANGYDVQIA---KLIGKKLGKKVVAVKTEWDGLLPALTSGKIDLIIAGMSPT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             R     + F           I     K     S++  +GA +  Q GT       D  
Sbjct: 118 AERRK--AINFSNPYRKSTFVVITKSNSKYANAKSLTDFAGAKLTAQQGTLHY----DLI 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK- 223
           K           +    +  +  +   D Y  +     + K      +   I        
Sbjct: 172 KQLKGAVRENAMKDFAAMRQSLISGTIDGYVAEDIEAQSFKSVYPNSTAINISKMPGFHV 231

Query: 224 ----SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
               S  +  + +G+ ++   V+     +  ++   + +  + +     ++     F+  
Sbjct: 232 SASDSETSIGVKKGNDKFLAQVNAALATISNSKRDQLMETAVKEQPSTDSDKKTNWFVST 291


>gi|319440319|ref|ZP_07989475.1| putative secreted protein [Corynebacterium variabile DSM 44702]
          Length = 276

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 60/213 (28%), Gaps = 14/213 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              +  G L+   N           +G+  GF+VD   A ++ +  D   + +   +   
Sbjct: 29  DQYRDGGTLRASTNPTFPPNQFKDPDGNIIGFEVDLVNATAALLGLD---VTFRQQDFNL 85

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              ++    +DI       T  R+      F                          G +
Sbjct: 86  ILPSIDGGTVDIGVSGFSDTEERQK--NYDFVDFYTSGIS--WATTPGKTVDPQDACGLT 141

Query: 148 ICVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           + VQ GT ++         +       +   +V+E       A    R DA + D +   
Sbjct: 142 VAVQKGTYSDTDDVQVKADECAAEGKPELTKLVYESANAASTATALGRADAMSSDSAVTD 201

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                ++     +   D    +P   A  +   
Sbjct: 202 YAIQRSEGK--LIPAGDAFDTTPFGWAFAKNSE 232


>gi|170702302|ref|ZP_02893199.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170132785|gb|EDT01216.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 313

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L  G+   L    +         GFD D  + +S ++      ++ +PL   +  L
Sbjct: 62  EAGTLTIGVAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRK---LKIVPLAWADWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           AL+S ++D +  N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 119 ALESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSRIQSIREPKDVAGLR 175

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYA 203
           I   AGT  E  L  + + +      P+  +  ++      A ++ R DA     S L  
Sbjct: 176 IVTDAGTNQEKILLAWDRENVAHGLKPVQVQYYDDQAMRIVAVQSGRADAVFSVNSVLAY 235

Query: 204 LKLTNDR 210
                 +
Sbjct: 236 QSAQQGK 242


>gi|260461176|ref|ZP_05809425.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259033210|gb|EEW34472.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 283

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 77/276 (27%), Gaps = 39/276 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++   + +F    +  A           +          +    A+G   G +
Sbjct: 1   MKVCRLAAVAAALSMFGFMHTALAED-----APKAITIATEGAYAPWNFTNADGKLDGLE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L   +     K   +  +      +L+  + D++  +   T  R     + F  
Sbjct: 56  IELANNLCERM---KVKCTIIAQDWDGLIPSLKVGKFDVIMASMFITPKR--LETIDFTQ 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-----------------------LSGASICVQAGTTTE 157
               D  GF   K   +  +                         L G  + VQA T   
Sbjct: 111 PYAIDPGGFAAAKDSDLGKLGASTEKFKLDDEAASQAAVDKLKPLLKGKVVGVQAATAML 170

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +  YF           ++  E+ D    A R DA     +AL A     +     V  
Sbjct: 171 EFVKKYF---GDTVEIREYKTTEQHDLDLAAGRIDAIFAQKTALAATLAKPEFSGFTVAG 227

Query: 218 PDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           P  +     +     + + D +   +++    A + 
Sbjct: 228 PGFVGGLFGAGTGAGLRKEDAKLKEMLNDAISAAIA 263


>gi|167589204|ref|ZP_02381592.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 295

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 14/184 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI   L   +          GFD D  + ++ ++      ++ + L   +  LAL 
Sbjct: 47  TLTIGIAPSLPPISTYATDARTVVGFDADLGQLVADSLGRK---VKIVALAWPDWPLALA 103

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 104 SGKVDAVISNVTVTEERK--QKFDFS-SYRKDQVGFYVRNDSKITSIREPKDVAGLRVVT 160

Query: 151 QAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L  + + +      P+  +  ++      A ++ R DA     S L     
Sbjct: 161 DAGTNQEKILLAWDRENVAHGLKPVAVQYYDDQAMRLVAVQSGRADAVFSVNSVLAYQSA 220

Query: 207 TNDR 210
              +
Sbjct: 221 QQGK 224


>gi|270285448|ref|ZP_06194842.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydia muridarum Nigg]
 gi|270289459|ref|ZP_06195761.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydia muridarum Weiss]
 gi|301336845|ref|ZP_07225047.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydia muridarum MopnTet14]
          Length = 257

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 64/246 (26%), Gaps = 14/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +   +  +        S  +     + +      G N     F  V   G+  GFD+
Sbjct: 6   KKAWMTFLAIVCSFCLAGCSKESK--DSVSE--KFIVGTNATYPPFEFVDERGETVGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +S  +       ++         L L+  +ID +      T  R   + +     
Sbjct: 62  DLAREISKKLGKKLEVREF---AFDALVLNLKQHRIDAIMAGVSITSSRLKEILMIPYYG 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   +       S        S+ VQ GT  E  L               F+   E
Sbjct: 119 EEIKSLVLVFKDGDSKSLPLDQYN-SVAVQTGTYQEEYLQSL-----PGVRIRSFDSTLE 172

Query: 182 IDAA-YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +      +    A      A   LK      +E + LP+          +        + 
Sbjct: 173 VLMEVLHSKSPIAVLEPSIAQVVLKDFPTLTTETIDLPEDKWVLGYGIGVASDRPSLASD 232

Query: 241 VSWTHY 246
           +     
Sbjct: 233 IEAAVQ 238


>gi|145299355|ref|YP_001142196.1| ABC-type amino acid transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142852127|gb|ABO90448.1| ABC-type amino acid transporter, periplasmic binding protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 258

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 20/214 (9%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L    +     F  V ++G   GF+VD   AL +A+  +   I             LQ +
Sbjct: 25  LVIATDATYPPFEMVDSSGKLGGFEVDLAYALCAAMKTECEVIN---QPWDALLPGLQVR 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI---MHKKKGISSVSQLSGASICVQA 152
           + D +  + + T  R     +AF  + Y     F+           +     G  I VQ 
Sbjct: 82  KYDAIMSSMNITDER--RQKVAFSQVYYMMQNRFVGRSDKAADFADTPEYFKGKVIAVQE 139

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--------YAL 204
           GT  +  +  ++           +   +      ++ R D   G++  L           
Sbjct: 140 GTPQDNFITAHY---GDVAKIKRYVNAQSPMLDLQSSRADYTFGNMVQLKVGFLDKEMGK 196

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +     P +     D I    +A A+ + D +  
Sbjct: 197 QFAFVGP-QFNGTQDKILGEGVAVALRKNDNKLK 229


>gi|15835275|ref|NP_297034.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydia muridarum Nigg]
 gi|7190695|gb|AAF39483.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydia muridarum Nigg]
          Length = 259

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 64/246 (26%), Gaps = 14/246 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K +   +  +        S  +     + +      G N     F  V   G+  GFD+
Sbjct: 8   KKAWMTFLAIVCSFCLAGCSKESK--DSVSE--KFIVGTNATYPPFEFVDERGETVGFDI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  R +S  +       ++         L L+  +ID +      T  R   + +     
Sbjct: 64  DLAREISKKLGKKLEVREF---AFDALVLNLKQHRIDAIMAGVSITSSRLKEILMIPYYG 120

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                   +       S        S+ VQ GT  E  L               F+   E
Sbjct: 121 EEIKSLVLVFKDGDSKSLPLDQYN-SVAVQTGTYQEEYLQSL-----PGVRIRSFDSTLE 174

Query: 182 IDAA-YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +      +    A      A   LK      +E + LP+          +        + 
Sbjct: 175 VLMEVLHSKSPIAVLEPSIAQVVLKDFPTLTTETIDLPEDKWVLGYGIGVASDRPSLASD 234

Query: 241 VSWTHY 246
           +     
Sbjct: 235 IEAAVQ 240


>gi|328555069|gb|AEB25561.1| cystine ABC transporter (binding protein) [Bacillus
           amyloliquefaciens TA208]
 gi|328913425|gb|AEB65021.1| cystine ABC transporter (binding protein) [Bacillus
           amyloliquefaciens LL3]
          Length = 269

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 3/167 (1%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G  T     A +   G+  G+D++  +A+   +     K  +  ++      +L +
Sbjct: 34  TVVVGTGTDFPNIAFMDEKGELTGYDIEVMKAIDKQL--PQYKFVFKTMDFSNLLTSLGN 91

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ID+++ N      RE        P  Y      +      I ++  L G ++ V A +
Sbjct: 92  RKIDVIAHNMAKNKEREKRFLYHKIPYNYSPMYITVKADNNTIHTLRDLKGKTVIVGATS 151

Query: 155 TTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYTGDISA 200
                +  Y K H          +   +        R DA      A
Sbjct: 152 NAADYMTAYNKTHGSPIRLKYAGQGSNDTANQIETGRADATVATPFA 198


>gi|291458316|ref|ZP_06597706.1| putative amino acid ABC transporter, amino acid-binding protein
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418849|gb|EFE92568.1| putative amino acid ABC transporter, amino acid-binding protein
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 309

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 66/217 (30%), Gaps = 8/217 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++   +     ++ +  +G W G D +   A+           +     +   F  L + 
Sbjct: 68  VRVVTSGSGEPYSLIDDSGKWTGIDAEIWEAIGEKTGWKIE--KLQATGSGATFGQLDAG 125

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D+ +        R  +         Y D Q  ++     I S   L G  + V  G  
Sbjct: 126 RADVAANCYAVNAER--TKKYLVSDPYYGDAQCVVVKPDSEIRSFDDLRGKRVGVLNGQA 183

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            + ++ D  K    +      +            R DA+    S     K  N    +  
Sbjct: 184 AQQSIEDMGKEKGFEVTLYEGDNGSAGYQDVLLGRLDAFASTDS--AVYKWENGTKQDLR 241

Query: 216 ILPDIISKSPLAPAIIQGDT--EWYNIVSWTHYAMVT 250
            L + +  + +A    + +   +  + V+     ++ 
Sbjct: 242 FLDERLYANDVAYYFPRTEEGKKLRDEVNVVLAGLME 278


>gi|261405477|ref|YP_003241718.1| family 3 extracellular solute-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261281940|gb|ACX63911.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           Y412MC10]
          Length = 294

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 14/221 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L +  +RG L+         F+     G   GFDV+    ++  +     K +++    +
Sbjct: 53  LRNAVERGTLRIATERDYPPFSYHGTGGILTGFDVEIAEEVARHM---ELKAEFVETGWE 109

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLS 144
                L   + D +          +      F           ++H   K  I + S + 
Sbjct: 110 NLLPGLTEGKYDAVFNQ--IEDRPDRRALYDFSVAYLSSTPVLLVHSSGKAQIRTFSDIK 167

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  + +           D  K +      +  + + +          DA   D  ++  L
Sbjct: 168 GKRVGLNPTGIY----KDMAKRYG--AEVVPIKYISDAANKLANGDLDAVISDQLSVTNL 221

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           K                  S ++ A ++G+ +    V    
Sbjct: 222 KQQFPD-IPVAAAESADQVSEISAAFVKGNPDLVAAVDNAL 261


>gi|227488108|ref|ZP_03918424.1| iron ABC superfamily ATP binding cassette transporter,
           solute-binding protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227541505|ref|ZP_03971554.1| ABC superfamily ATP binding cassette transporter, extracellular
           solute-binding protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227091970|gb|EEI27282.1| iron ABC superfamily ATP binding cassette transporter,
           solute-binding protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227182787|gb|EEI63759.1| ABC superfamily ATP binding cassette transporter, extracellular
           solute-binding protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 312

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 76/248 (30%), Gaps = 17/248 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            A +  ++   G L  G N          + G+  G D+D   A++  +  +   ++   
Sbjct: 49  AAMVPEEVAADGILLYGTNPPFPPMEFKNSAGEIIGSDIDLAAAVAKVMGLEAKPVE--- 105

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                   A+ +  ++  +     T   E      F     +   G    ++ G +    
Sbjct: 106 QEFPMILPAISAGTVEFGAAGF--TDSEERRKNYDFVD---YLVAGIQWSQQPGGNVDPD 160

Query: 143 L-SGASICVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
              G ++ VQ GT ++         +         H + ++  +    A    R DA++ 
Sbjct: 161 NACGLTVAVQRGTVSDTDDVDRRSEECVTQGKPAIHKLAYDSSDTAANALVLGRVDAFSA 220

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA-EELG 255
           D                  ++ DI   +     + +G      +     Y +     E  
Sbjct: 221 DAPVNAYAVARAG--GRMELVGDIYDAAYYGWPVKKGSDLAPALAKALEYLIENGYYEQI 278

Query: 256 ITQKNINQ 263
           + Q N+N 
Sbjct: 279 MGQWNLND 286


>gi|172063347|ref|YP_001810998.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171995864|gb|ACB66782.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 317

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L  G+   L    +         GFD D  + +S ++      ++ +PL   +  L
Sbjct: 66  EAGTLTIGVAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRK---LKIVPLAWADWPL 122

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           AL+S ++D +  N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 123 ALESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSRIQSIREPKDVAGLR 179

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYA 203
           I   AGT  E  L  + + +      P+  +  ++      A ++ R DA     S L  
Sbjct: 180 IVTDAGTNQEKILLAWDRENVAHGLKPVQVQYYDDQAMRIVAVQSGRADAVFSVNSVLAY 239

Query: 204 LKLTNDR 210
                 +
Sbjct: 240 QSAQQGK 246


>gi|329925394|ref|ZP_08280316.1| putative cystine-binding periplasmic protein [Paenibacillus sp.
           HGF5]
 gi|328939881|gb|EGG36218.1| putative cystine-binding periplasmic protein [Paenibacillus sp.
           HGF5]
          Length = 294

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 64/221 (28%), Gaps = 14/221 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L +  +RG L+         F+     G   GFDV+    ++  +     K +++    +
Sbjct: 53  LRNAVERGTLRIATERDYPPFSYHGTGGILTGFDVEIAEEVARHM---ELKAEFVETEWE 109

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLS 144
                L   + D +          +      F           ++H   K  I + S + 
Sbjct: 110 NLLPGLTEGKYDAVFNQ--IEDRPDRRALYDFSVAYLSSTPVLLVHSSGKAQIRTFSDIK 167

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  + +           D  K +  +  PI +    +          DA   D  ++  L
Sbjct: 168 GKRVGLNPTGIY----KDMAKRYGAEAVPIKYIS--DAANKLANGDLDAVISDQLSVTNL 221

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           K                    ++ A ++G+ +    V    
Sbjct: 222 KQQFPEMPVAAAESADQVSE-ISAAFVKGNPDLVAAVDNAL 261


>gi|317180215|dbj|BAJ58001.1| ABC-type polar amino acid transport, periplasmic component
           [Helicobacter pylori F32]
          Length = 240

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 65/228 (28%), Gaps = 11/228 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            + +   +  +  +  G       F      G   G+DV+  R L+  +      I++  
Sbjct: 3   ASGLYERLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVK---IKFHE 59

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141
            +       L+S + D+++     T  ++            + G   ++ K    I  + 
Sbjct: 60  TSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSLPYSYSGTIMLVRKDENRIKDIK 118

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            + G        +T          A       +  + + +        R D       A+
Sbjct: 119 DIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSMAQALLLVAQKRADLTLNSSLAI 172

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                T++     +           +  I +   +   +++     ++
Sbjct: 173 LNYLNTHENNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLI 220


>gi|134045607|ref|YP_001097093.1| extracellular solute-binding protein [Methanococcus maripaludis C5]
 gi|132663232|gb|ABO34878.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 243

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 85/250 (34%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     IL   ++  +   +N+  L        L  GI   +     +  +G   GF+
Sbjct: 1   MLKFKIPIILTAFLVLISGCLSNSESLEK----ETLVVGITPEIYPINYMN-SGVHSGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +++   + + +   P    +          A+++ ++D        T  RE    + F  
Sbjct: 56  IEYITEIVNRMNMKPE---FRVYEFMNLLNAVETDRVDCAISLITITPEREEL--VMFSK 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    ++ K  GI +   L   ++ V   T  +          N ++    +    
Sbjct: 111 SYLNTTSVHVVDKNTGIET---LDKCTVGVIKSTVQDECATKL--KENYEFTLYKYRTTA 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++ A+   + +A   D   LY   +   + +    + +  +   ++ A+   +TE  N 
Sbjct: 166 ELERAFDQGKVNAMIVDK--LYFEYVLYPKNNNLTSIFECQNSENISIAVNNENTELLND 223

Query: 241 VSWTHYAMVT 250
           ++     M  
Sbjct: 224 INNVITEMEE 233


>gi|302023342|ref|ZP_07248553.1| extracellular solute-binding protein [Streptococcus suis 05HAS68]
          Length = 291

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 77/262 (29%), Gaps = 20/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K  +  +  +  L   + S             +    +++ G LK      L   +  
Sbjct: 1   MLKKVWPQLSMVSTLTLAACSSSSSNTSSSSAEQTQWEKVQEAGVLKVATPGTLFPTSYY 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               +  G+++D    +   +     +I+Y  +   E F A+ S ++DI   N D T  R
Sbjct: 61  NDAKELVGYEIDMINEIGKRL---KLEIEYQEIGVAEAFTAVDSGKVDISVNNFDMTEAR 117

Query: 111 EISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +      F     +   G  +          + LS  +     G      +    +    
Sbjct: 118 KE--KYNFSIPYKYSVGGYIVREDGSSGIEAADLSDWTGKKAGGGAGTQYMK-IAEKQGA 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSP--L 226
           +         +         R D    D  + + A+K  N    +  +       +P   
Sbjct: 175 EPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVMAIKWANANFPDIKVKMGDAKYNPTEQ 234

Query: 227 APAIIQGDTEWYNIVSWTHYAM 248
              + + DT     +     AM
Sbjct: 235 GIVMSKADTSLKEKIDEALEAM 256


>gi|170016651|ref|YP_001727570.1| amino acid ABC transporter substrate-binding protein [Leuconostoc
           citreum KM20]
 gi|169803508|gb|ACA82126.1| Amino acid ABC transporter, substrate binding protein [Leuconostoc
           citreum KM20]
          Length = 264

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 67/220 (30%), Gaps = 22/220 (10%)

Query: 1   MYKDFFV-------SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K               + +    +    AS    I     L  G+      F+  + +
Sbjct: 1   MKKITIAVITIVIILATAIGLARQQAHHKQAST-DTILPN-TLTIGLEGTFAPFSYRQ-D 57

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+VD   A++  +   P   +Y+          L SK+ D++  +   T  R   
Sbjct: 58  GKLTGFEVDLSTAIAKKLDLKP---KYVQTKWDSLIAGLGSKRYDVIFNDVGVTPER--Q 112

Query: 114 LGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F     +     I  K    ++S++ L G  +  Q+ T+    L     A      
Sbjct: 113 QAYRFSTPYLYAKTVLIKRKNNTQLNSLADLKGKKMA-QSTTSNFGVL-----AKKSGAE 166

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +    + E        R D    D+ A    +  N    
Sbjct: 167 IVAVPGMTEAMNMVTTQRADGALNDLGAYATWQKANPDAD 206


>gi|125624394|ref|YP_001032877.1| amino acid ABC transporter substrate binding protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124493202|emb|CAL98167.1| amino acid ABC transporter substrate binding protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300071181|gb|ADJ60581.1| amino acid ABC transporter substrate binding protein [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 282

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 66/238 (27%), Gaps = 13/238 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     V+   L ++   +    +S            +    +     F    + G+  G
Sbjct: 1   MRTSLKVTFAALSLIAAGTLVACSSGSKKTSDNKTTSIVIATDGATKPFTYSDSQGNLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D++  RA+   +      +++   +       + S +  + + +  W   R       F
Sbjct: 61  YDIEVARAVFKKM--PQYTVKFQATDFSGIAPGIDSGRYQMGANDFGWEKSRAE--KYYF 116

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      ++ K     +++ L+G S      +    ++ D+ KA+  K   I +  
Sbjct: 117 SSPLSKSNNAVLV-KSGTYKTLADLAGKSTIGNPASNYTKSIQDWNKANPDKQIKISYSA 175

Query: 179 VEEI----DAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                        + + D    D         +   D      I  D           
Sbjct: 176 DSTSINTRFTQVESGKIDFMLYDKISLQSAVKEQGFDNLKIEDISMDTGDAEHDGYEY 233


>gi|254487057|ref|ZP_05100262.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseobacter sp. GAI101]
 gi|214043926|gb|EEB84564.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseobacter sp. GAI101]
          Length = 244

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 56/202 (27%), Gaps = 24/202 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +    +   F     +            ++ G       +  +  +G+  GF+
Sbjct: 1   MKKLLLATAALALSTGFAMADAHGKT---------IRMGTEGAYPPYNFLNDSGEVDGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L +         +++          L S   D +      T  RE    + F  
Sbjct: 52  REVGDELCARA---ELTCEWVTNEWDSIIPNLTSGNYDTIIAGMSITDEREEV--IDFTQ 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +       + K     + + L G  +  Q  T     +A+           + F   +
Sbjct: 107 NYFPPAASAYVAKS----ADADLKGGVVAAQTSTIQAGFVAE------SGATLLEFATYD 156

Query: 181 EIDAAYRAHRCDAYTGDISALY 202
           E  AA      DA   D  AL 
Sbjct: 157 ETVAAVNNGEADAVFADKDALA 178


>gi|288906038|ref|YP_003431260.1| amino acid ABC transporter substrate binding protein [Streptococcus
           gallolyticus UCN34]
 gi|288732764|emb|CBI14338.1| putative amino acid ABC transporter substrate binding protein
           [Streptococcus gallolyticus UCN34]
          Length = 265

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 15/197 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  L+    +     A                   +  F+     G   G+D
Sbjct: 1   MKK-VLLGLAVLLSASLSVRVEAAD--------KKAVVATAGDIKPFSYQNKKGQLTGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   +A S  I  +  KI +        F+ L S    + + N  +T  R  +    +  
Sbjct: 52  IQVIKAASKHI--NGYKISFKKTAWDSIFVGLDSDIYQVAANNLSYTEER--ANKYLYSV 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ER 178
               +    ++ K   I+S+  + G +     GT+T   + D+   H+     I +  E 
Sbjct: 108 PIAKNPLVLVVKKGSKITSLDDIGGKTTQDDTGTSTAKFVDDWNSQHSDNPSTIDYSGED 167

Query: 179 VEEIDAAYRAHRCDAYT 195
           V +          D   
Sbjct: 168 VTKRLLDLDDGEFDYLI 184


>gi|269103260|ref|ZP_06155957.1| putative transglycosylase Slt family [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163158|gb|EEZ41654.1| putative transglycosylase Slt family [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 498

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 84/241 (34%), Gaps = 12/241 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            + +FVS++ L ++    + +   + L  I++ G L+ G        +    N    G D
Sbjct: 11  IRQYFVSLITLFLISGCQWQSEPHNALDRIRETGVLRVGTLNNQ--LSYYIGNEGPTGLD 68

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  +  +  +           L++   F AL    +DIL+     T  R          
Sbjct: 69  YELAQLFAKKLGVKLEMQPMFSLSS--LFPALDRGNVDILAAGLTITPNRLQDFRAT-PA 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177
             Y               + + L+    ++ V  G++ EL L    + + ++K+  +   
Sbjct: 126 YYYASQLVVYKKGTWRPRTPADLAKNKGTLTVVKGSSHELQLKQLQQKYPDLKWQAVSET 185

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E+     + + D +T   S   AL        +  I  ++  + P++  +     + 
Sbjct: 186 DDDELMRDVASGKLD-FTIADSVDVALIQRIH--PDIAIAMELTDEEPISWFVKNSSNDN 242

Query: 238 Y 238
            
Sbjct: 243 L 243


>gi|222081161|ref|YP_002540524.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725840|gb|ACM28929.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 258

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 14/202 (6%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +  F  ++   + L           L +I+K G +K G       F+   A+G   G 
Sbjct: 1   MKRAYFLATMFAALNLTANMAVAEDGALAEIQKAGVIKIGTTGDYKPFSYKGADGSLTGA 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+   + L++++   P    ++    K      ++ + D+          R       F 
Sbjct: 61  DIAMGKDLATSLNVKPE---FVMTTWKTMLDDFKAGKFDVALGGITVNPARAEV--GDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                DG+  I          +          + V  G T +    ++F           
Sbjct: 116 LPNVSDGKRPIARCADKDKYATLEAIDQPSVRVIVNPGGTNDKFAHEHFSKA----PIEE 171

Query: 176 FERVEEIDAAYRAHRCDAYTGD 197
           F   + I     A + D    D
Sbjct: 172 FADNKAIFDEIAADKADVMVTD 193


>gi|167745543|ref|ZP_02417670.1| hypothetical protein ANACAC_00234 [Anaerostipes caccae DSM 14662]
 gi|317472893|ref|ZP_07932199.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
 gi|167655264|gb|EDR99393.1| hypothetical protein ANACAC_00234 [Anaerostipes caccae DSM 14662]
 gi|316899613|gb|EFV21621.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
          Length = 268

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 67/247 (27%), Gaps = 24/247 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K   V +  ++ +   +            K    K   +T    F     +G+  G D+
Sbjct: 4   KKVLAVGLAAVMGISLVACGGGN---KKDSKEKTYKIASDTTFTPFEFEDKDGNRVGIDL 60

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A++          +   +       +++S Q D +      T  R+      F   
Sbjct: 61  DLLEAIAKEEGFKY---KVTAVGFDAAMASVESGQSDGMIAGMSITKERK--QKYDFSEA 115

Query: 122 TYFDGQGFIMHKKKGISSVSQ------------LSGASICVQAGTTTELTLADYFKAHNM 169
            Y     F + K        +            L G ++  + GT       +  + +  
Sbjct: 116 YYDSKVAFAVKKGGKTFDNIKDKKKAEKEALSSLKGKTVAAKVGTVGATYANENAEKYGY 175

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           K     F+    +  A       A   D   +       +   +     +  S+     A
Sbjct: 176 K--VRQFKDSPTMYQAVLTGNAAACFEDFPVISYQIGQKNLKLQVAFTSESGSQ--YGFA 231

Query: 230 IIQGDTE 236
           + +G   
Sbjct: 232 VKKGKNS 238


>gi|255530596|ref|YP_003090968.1| extracellular solute-binding protein family 3 [Pedobacter heparinus
           DSM 2366]
 gi|255343580|gb|ACU02906.1| extracellular solute-binding protein family 3 [Pedobacter heparinus
           DSM 2366]
          Length = 228

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 12/214 (5%)

Query: 33  RGFLKCGINTGLV-GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +  LK G+++             +++GF+VD   A+++ +      I+Y           
Sbjct: 4   KKVLKVGLDSAAPFPMHSDYNAENFQGFEVDLLGAITNHLG---LAIEYEVSLWSTILEK 60

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L   ++DI+      T  R     L F           ++ ++  ++S+      +I V+
Sbjct: 61  LFKGELDIICSAVTVTASR--QHILEFSNPYLHFRLCAVVGQEDTLNSLHHFKNKTIGVR 118

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T  E  + + F A+N     +     +E+     + + D    D          N + 
Sbjct: 119 EATEAEKYVREQFPANN----IVYAVTNKELYRKLASGKIDLLVDDSPIAGGFLQKNKKL 174

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              + LP   S    A A+ +GD +     +   
Sbjct: 175 KIGMFLPKTDSS--YAIAMKKGDVQLKAQFNEVL 206


>gi|330503968|ref|YP_004380837.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Pseudomonas mendocina NK-01]
 gi|328918254|gb|AEB59085.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Pseudomonas mendocina NK-01]
          Length = 268

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 79/269 (29%), Gaps = 21/269 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
            ++     L     S +A+        G LK G+      F   + +    GFD +   A
Sbjct: 10  TALTLACTLAGLFTSAHAAETPKTLASGELKVGMEISYPPFEYYEGD-KVLGFDPEVSAA 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  +  +     +  ++     L L + + D +         R               G
Sbjct: 69  LAKRLGLEA---SFSDISFPNLILGLDAGRFDTIISGMYILPERLEKAD---AIPYAKTG 122

Query: 127 QGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMK-YHPIVFERV 179
              ++    +K  ++  +L G ++ +Q GT+    L      Y K           +   
Sbjct: 123 AAIMVRSDAEKKPATPEELCGLTVGLQQGTSWVPALQKVSDGYCKEQGAGAITINQYPTT 182

Query: 180 EEIDAAYRAHRCDAY--TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            E   A  +    A+      S     +         +     I    L   + +G+ + 
Sbjct: 183 AETTQALLSGHIQAHLEIDAASLRIVERAK---GRIAISSKGSIYPQVLGIYVKKGNAQL 239

Query: 238 YNIVSWTHYAMVTAEELG--ITQKNINQV 264
            + +         + E    + + N+ + 
Sbjct: 240 LDALKAALDEFKASGEYSELLKKYNLEEA 268


>gi|239626407|ref|ZP_04669438.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239516553|gb|EEQ56419.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 281

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 60/227 (26%), Gaps = 33/227 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFS--------------------TNASILGDIKKR------G 34
           M K   +S+  ++ L                                    +        
Sbjct: 1   MKKIMALSMAAVMALSMAGCGSKPAADTAAAAEASADTTAAQAEDTTAAESEAAASASGK 60

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
                 +T    F      G+  G D+D  +A++     +   I    +       AL++
Sbjct: 61  KYVINTDTTFAPFEFENDKGEMVGIDLDILKAVAEDQGFEYEVIP---VGFSAAVTALEA 117

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D +      T  R       F    Y  G G  + +   I+S  QL G ++  + GT
Sbjct: 118 GECDGVIAGMSITDERAA--KYDFSEPYYDSGVGMAVLQGSDITSYDQLKGQNVAAKIGT 175

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
                       +        FE   ++  A       A   D   +
Sbjct: 176 EGCTFAESIADQYGF--EVTQFESSSDMYQAVLGGEAVACFEDYPVI 220


>gi|269123376|ref|YP_003305953.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptobacillus moniliformis DSM 12112]
 gi|268314702|gb|ACZ01076.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptobacillus moniliformis DSM 12112]
          Length = 510

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 94/297 (31%), Gaps = 43/297 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------- 53
           M K   + IL +   F  S                L+ G+  G   F   +++       
Sbjct: 1   MKKRILLFILLMYSSFSISME-------------KLRVGMEAGYAPFNWFQSDDRNGAVK 47

Query: 54  ---GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G   G+DV+  + ++  +  +   +Q           AL S +ID++      T  R
Sbjct: 48  LKNGYAGGYDVEIAKIIAEKLNMELEIVQSDW--DSLLGPALNSDKIDVVIAGMSPTKER 105

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAH 167
                L F    Y      ++ K       +++ + S + +  Q  T     L    +  
Sbjct: 106 --RENLEFTDPYYESDLVIVIKKDSKYLNANNIQEFSNSKLTAQLNTFHYTVLDQIERLK 163

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS----- 222
                    E    +  A  + + D Y  +     AL      P+   +  D  +     
Sbjct: 164 KEN----ASENFSNMLVALESGKIDGYISEKPG--ALSAKLSNPNISFVEFDKDNGFKYD 217

Query: 223 --KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                +A A+ +G+TE  + ++     +   +   I +K I       ++     FL
Sbjct: 218 RDDVNIAIALKKGNTELRDKINKALSEISVEQREEIMKKAIATQPNQGSDELPNNFL 274


>gi|329937971|ref|ZP_08287453.1| amino acid ABC transporter solute-binding protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302928|gb|EGG46817.1| amino acid ABC transporter solute-binding protein [Streptomyces
           griseoaurantiacus M045]
          Length = 296

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 12/246 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S S    +L  ++ +G  + GI    + F  +  NGD  G   +  + +   +  D
Sbjct: 32  VATASTSDGGDLLDRLRAQGVARLGIAGE-IPFGYIDKNGDLTGEAPELAKVIFKRLGVD 90

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             ++Q +P         L S+Q DI+S         +    + F    Y     F++ K 
Sbjct: 91  --RVQAVPTEFGSLIPGLNSQQFDIVSAGMYINP--DRCEQVIFSDPDYQMLDSFVVRKG 146

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               + +   +         G T    +A   +A   +   ++         A  A R D
Sbjct: 147 NPLGLHNYQDVVKKKAKFATG-TGYAEIAYAVEAGYEESDILIVPDQVAGMNAVEAGRAD 205

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
            +         + L + +         ++   P       A    +T+  +  +     +
Sbjct: 206 VFAATAVTARQVVLKSRKAEATEAFKPLVDGKPHVDGGGFAFRPTETKLRDAFNAELRKL 265

Query: 249 VTAEEL 254
             + EL
Sbjct: 266 RESGEL 271


>gi|329943909|ref|ZP_08292178.1| ABC transporter, substrate-binding protein, family 3 [Actinomyces
           sp. oral taxon 170 str. F0386]
 gi|328531342|gb|EGF58184.1| ABC transporter, substrate-binding protein, family 3 [Actinomyces
           sp. oral taxon 170 str. F0386]
          Length = 306

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 11/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L    +T       +  +G   G+DVD   A+++ +         +     +  +A
Sbjct: 60  DDGVLDVAASTDYAPAEFLDPSGKAVGYDVDLTNAIAAVLGVKGK----VHTAEFDSIIA 115

Query: 92  LQSKQIDILSRNTDWTLLREISLGL-AFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
               + D    +   T  R   + +  +  +           K    S   +L G +I V
Sbjct: 116 SIGSKYDAGISSFTVTPERTAEVDMTTYINVGSRFNVQAGNPKGVETSDHLKLCGRTIGV 175

Query: 151 QAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           Q GT  E  +     +  +A         + +  E          DA T   S +    +
Sbjct: 176 QVGTDQETAMRKAADECSEAGKGVLSVRAYSKQSEATTGLVGGTIDA-TYSDSTVAGYAV 234

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 + V L ++   +P      + D ++   +     
Sbjct: 235 ELTDG-QIVTLGEVEDAAPQGVVTSKADPQFTAAIQAAVQ 273


>gi|148259696|ref|YP_001233823.1| extracellular solute-binding protein [Acidiphilium cryptum JF-5]
 gi|326403334|ref|YP_004283415.1| putative amino acid ABC transporter substrate-binding protein
           [Acidiphilium multivorum AIU301]
 gi|146401377|gb|ABQ29904.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidiphilium cryptum JF-5]
 gi|325050195|dbj|BAJ80533.1| putative amino acid ABC transporter substrate-binding protein
           [Acidiphilium multivorum AIU301]
          Length = 279

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 11/225 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L    +     F  +  +G   GFDVD    L+  +      I     N         
Sbjct: 47  GHLTICTHLSYKPFEYINKDGKVVGFDVDMLDLLAKRLGVKTRIISIDW-NQVTSGAVFA 105

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D+       T  R     + F    +   Q  +  K  G+  ++ L G    VQ  
Sbjct: 106 ANRCDVAMGAETITPERAK--AVLFSDPYFDATQVLLAKKGSGVHGLASLKGKRFGVQVN 163

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           TT ++      +A    Y  ++F  +    +A       A   D   +Y    T+    +
Sbjct: 164 TTGQIYADK--RAAKFGYTTVIFPDLIAEASAVSVGAVAAAINDNGPMYEYARTHP---D 218

Query: 214 HVILPDIISKSPLAPAIIQGD---TEWYNIVSWTHYAMVTAEELG 255
             ++ +  +      A  +     T    +++       +  E  
Sbjct: 219 THVVAEFDTGEHYGFAFKKNSANATRLAGVLNTVLAKAKSDGEYN 263


>gi|152968093|ref|YP_001363877.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
 gi|151362610|gb|ABS05613.1| extracellular solute-binding protein family 3 [Kineococcus
           radiotolerans SRS30216]
          Length = 268

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 64/212 (30%), Gaps = 14/212 (6%)

Query: 36  LKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G       F+       D  G+D+D  +A+   +  D   +++   N    F  +++
Sbjct: 42  LTFGTEGTYAPFSYHDEKTNDLVGYDIDVAKAVGEQLGRD---VEFSENNWDSLFAGMEA 98

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
           K+ D ++     T  RE      F           +       ++S++ ++G +      
Sbjct: 99  KRYDGIANQVSITAEREA--KYVFSAPYTVSTGVVVTRADDTSVTSLADIAGKTSA---- 152

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            +T    A        K   +      +     +  R D  T +        L     + 
Sbjct: 153 QSTTSNWAQTATEAGAKVEAVEGLT--QAMTLLKQGRVD-VTVNDQLAVLDYLKTSGDTG 209

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             I  +   ++       + + E    VS   
Sbjct: 210 VKIAAETDDRTEQGFVFRKDEAETAQQVSDAL 241


>gi|288936012|ref|YP_003440071.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|288890721|gb|ADC59039.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 270

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 84/251 (33%), Gaps = 18/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++     +  L  L   S +     +  I  +G L  G     + F  VKA G   GFD+
Sbjct: 8   FRHVRTLMFALTALPLVSHAA----VETI-AKGQLTYGTAATFMPFEYVKA-GKLTGFDI 61

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   ALS  I   P+ +    +  K    ALQ K++DI++        R     + F P 
Sbjct: 62  DLINALSKEIQLTPAPMP---MEFKGLIPALQGKRLDIINSAMYVNPTRAE--QVDFVPY 116

Query: 122 TYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLA----DYFKAHNMKYHPIV 175
                +  +        +     L G +I V  G   E           +A     + + 
Sbjct: 117 LKIGSRVVVRKGNPANITGRDLSLCGKNIAVTLGGIEESQARADNQRCVEAKKPAINVMT 176

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    +   A    R DA         AL  T        +  +  + + +A A+ +GDT
Sbjct: 177 FPAATDSAVAVAQGRADAEFLSTPGTVAL-FTEKAGMFEAVGAEFEANTHIAFAVRKGDT 235

Query: 236 EWYNIVSWTHY 246
               ++     
Sbjct: 236 ATQALLEQGLQ 246


>gi|229817432|ref|ZP_04447714.1| hypothetical protein BIFANG_02694 [Bifidobacterium angulatum DSM
           20098]
 gi|229785221|gb|EEP21335.1| hypothetical protein BIFANG_02694 [Bifidobacterium angulatum DSM
           20098]
          Length = 309

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 68/220 (30%), Gaps = 14/220 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L  G+         +  +G    G+DVD  +A+   +     K + +         
Sbjct: 66  KSGELSVGMELSYAPAEFLAEDGKTPTGYDVDLSKAIGKVLG---LKTKIVSSMFDTIVP 122

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ++ + + D+       T  R     + F           +          S L G  I V
Sbjct: 123 SVGT-KYDLGITAMTITKER--MDSVDFVSYYRAGSTWTVQKGNPKKIDSSDLCGNKIAV 179

Query: 151 QAGTTTELT---LADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           Q GT  E     +A   KA   K    + ++R  E   A    + D +  D        +
Sbjct: 180 QTGTVQEDEANKIAKQCKADGKKNAEVVSYKRQAEAATAVATGKADTFYADSPV-AGYAI 238

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                 E +     + K     AI +G+T+    V     
Sbjct: 239 AQTDGLEALGKDVGVVKE--GIAIQKGNTKMDAAVQKAVQ 276


>gi|172040835|ref|YP_001800549.1| putative secreted protein [Corynebacterium urealyticum DSM 7109]
 gi|171852139|emb|CAQ05115.1| putative secreted protein [Corynebacterium urealyticum DSM 7109]
          Length = 335

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 77/259 (29%), Gaps = 33/259 (12%)

Query: 3   KDFFVSILCLIILFFTSFSTNA-----SILGDI----------------KKRGFLKCGIN 41
           +    +IL    L  T   TN          +I                + +G L  G N
Sbjct: 8   RSAVAAILATATLVLTGCVTNEELGNPDGWEEIPPPAKPELVGMVPQKFQDKGTLSVGAN 67

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           T         + G   GF++D  RA  S +  D   +    ++      A+ +  ID+ +
Sbjct: 68  TPYAPNEFKDSQGKIIGFEMDLVRAAGSKLGLD---VVPRQMDFNLILPAVSAGTIDVGA 124

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT----- 156
                T  R+      F               ++         G ++ VQ GT +     
Sbjct: 125 SAFTDTEERQK--NYDFVDFFSAGIAWATQPGRENSIDPDNACGLTVAVQKGTYSDTDEV 182

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E       +        +V+   +    A    R DAY+ D S        ++     V 
Sbjct: 183 EEKSQACVENGKPAIDKLVYPTADAAATATILKRADAYSSDSSVTAFAIQRSEDK--LVQ 240

Query: 217 LPDIISKSPLAPAIIQGDT 235
           + +    +P   A  +G  
Sbjct: 241 VGEAFDTAPFGWAFPKGSE 259


>gi|330836704|ref|YP_004411345.1| extracellular solute-binding protein family 3 [Spirochaeta
           coccoides DSM 17374]
 gi|329748607|gb|AEC01963.1| extracellular solute-binding protein family 3 [Spirochaeta
           coccoides DSM 17374]
          Length = 254

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 67/217 (30%), Gaps = 17/217 (7%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               +        +  NG   GF++D  + ++              +     F  L +KQ
Sbjct: 34  VIAHDATWPPLEFIDENGVLVGFEIDLVKEVARRTGITFES---RNVAWDGIFAGLLNKQ 90

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTT 155
            D ++ +   T  R+      F        Q  ++    + + +   L    + VQ GTT
Sbjct: 91  YDAIASSVTITAERQK--QFDFTVPVLRVTQSIMVRTNAQALKTPDDLKFRKVGVQIGTT 148

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +             + ++ +          + DA   D     A       PS   
Sbjct: 149 GGYAIEGI-----EGIQVLSYDEIGFAVEDLLNGKVDAVVCDSII--ASDFVLSNPSYSG 201

Query: 216 ILPD----IISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            L            LA  +++G+T   +++S T  AM
Sbjct: 202 RLTVSGTASSDTEELAWVVVKGNTSLRDLLSSTLEAM 238


>gi|119383468|ref|YP_914524.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119373235|gb|ABL68828.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 272

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 67/224 (29%), Gaps = 10/224 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L DIK  G +    +     F  +  NG ++G   D    +S  I  +P    Y  + 
Sbjct: 26  DQLDDIKAAGKIVTATDMHYAPFDMLN-NGTYEGMTKDLFDEVSKEIGVEP---VYQDIP 81

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQL 143
                  L+  + DI+      T  R       F           +       ++    +
Sbjct: 82  WTAELPGLEVGKFDIVIAPVTITPER--LERYTFTLPIADATVSLVRAAANTELTKPEDI 139

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G ++ VQ GT     L  Y ++     +   +   +E  A   A R DA  G +  L  
Sbjct: 140 KGKTVGVQQGTAQFRQLQAYGESLG-GVNVKEYGTTDEAYADLAAGRLDAVAGSLPNLTY 198

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWTH 245
           L                   +  A  + + +    +   ++   
Sbjct: 199 LVKNRAETFALFEPAQFGQPTYFAWVLRKEEGSESFAKAINDAL 242


>gi|134293667|ref|YP_001117403.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134136824|gb|ABO57938.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 313

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L  GI   L   +          GFD D  + +S ++      ++ +PL   +  L
Sbjct: 62  EAGTLTIGIAPSLPPISTYATDARTVIGFDADIGQLVSDSLGRK---LKIVPLAWADWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           AL+S ++D +  N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 119 ALESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQSIREPKDVAGLR 175

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI---DAAYRAHRCDAYTGDISALYA 203
           I   AGT  E  L  + + +      P+  +  ++      A ++ R DA     S L  
Sbjct: 176 IVTDAGTNQEKILLAWDRENVAHGLKPVQVQYYDDQAMRIVAVQSGRADAVFSVNSVLAY 235

Query: 204 LKLTNDR 210
                 +
Sbjct: 236 QSAQQGK 242


>gi|260221677|emb|CBA30480.1| hypothetical protein Csp_C23760 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 291

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 70/242 (28%), Gaps = 20/242 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
           +   +++  L  L   S S +A  L D+K R  +                  G   G++ 
Sbjct: 28  RRLTLAVSLLAALGAWSTSASAQSLPDLKGR-TIVAVTENAYPPLNFKDPKTGQSVGWEY 86

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++  +    +K+ +   +      A++  Q D+           +    + F   
Sbjct: 87  DVFNEIAKRL---NAKVDWKLTSWDTMIEAVRKGQFDVGMDGITI--KDDRKKQVDFSDA 141

Query: 122 TYFDGQGFIMHKKKGISSVSQ--------LSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                Q  ++   +   + ++        L GA        T    + D  + +      
Sbjct: 142 YMVSEQFMMVRANEKRFTDAKGFKANPKLLVGAQNGTTNFYTAVYEVLDGNEKN---PRI 198

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            ++E       A +A   D    D  +          P  + ++   + +        +G
Sbjct: 199 KLYETFGLSMQALKAGDVDTVLTDGVSSQGYVKAF--PDTYKVVGKPMGREEFGFIYKKG 256

Query: 234 DT 235
             
Sbjct: 257 SD 258


>gi|255656162|ref|ZP_05401571.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-23m63]
 gi|296450404|ref|ZP_06892160.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP08]
 gi|296879473|ref|ZP_06903467.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP07]
 gi|296260665|gb|EFH07504.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP08]
 gi|296429619|gb|EFH15472.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Clostridium difficile NAP07]
          Length = 265

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 95/289 (32%), Gaps = 26/289 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L  + L  T   T  S   ++K    +    +     ++ V  NG+ KGF+
Sbjct: 1   MIKRNIIKCLVAV-LSLTVLVTGCSKKEEVKDEKVITVASSNSADPYSYVD-NGEHKGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +          I+  P      F  L S ++D+ +        +E         
Sbjct: 59  VDMWKEIGKRSGYK---IKMEPTGFSSIFGMLDSGKVDVAANFFGM--SKERLEKYDASI 113

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               D     +      I+ +  L G  + V  G+  +   A   K +  +     +   
Sbjct: 114 PYGSDSVCIAVKDGNNEINKLEDLKGKVVAVSEGSQGQQVAASVNKDNLFEEKV--YGDG 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R  A+      +       +   +  +L + +S + +A    + D +   
Sbjct: 172 TNGLQDLDLGRVSAWIDAELTVIGDAKKAN--MKVRVLDEKLSVTNIAYFFKKNDEKSKT 229

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSNIGE 287
           I    + A             I ++  D T   + +++ G+D S++I +
Sbjct: 230 IKEDVNKA-------------IEEMLADGTVKKISEKWFGMDVSADIQK 265


>gi|50086448|ref|YP_047958.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Acinetobacter sp. ADP1]
 gi|49532424|emb|CAG70136.1| putative amino acid binding protein (ABC superfamily, peri_bind)
           [Acinetobacter sp. ADP1]
          Length = 281

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 83/269 (30%), Gaps = 25/269 (9%)

Query: 1   MY-KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M  K  F   L +  L  T+ S     ++ +     KK   L  G +     +  +  +G
Sbjct: 1   MKMKGAFTVSLLVSSLMLTACSKGTEQSHTTTQDTAKKT-TLNVGSDMTFPPYEYL-EDG 58

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             KG DV+    ++ +      +  ++          L+ K+ D+L  +   T  R   +
Sbjct: 59  KPKGVDVEIMAKIAESDG--SYQPNWIDTRWANLIPGLKGKKFDVLFSSMYITKERLQQI 116

Query: 115 GLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAH 167
            +      Y      ++     ++      L G  +    GT     L +          
Sbjct: 117 DMI---PYYKTDIALLVRGDSTLNPKGPDDLCGTVVGTMKGTAFATQLQEISEKRCVAKG 173

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL- 226
             +     FE   +   +  AH  D    D + +             V +    S  P+ 
Sbjct: 174 KAEIKVREFESSPQTTQSLLAHAVDIQYDDAAVMA---NAVKNLGSKVKVTSTESFYPIL 230

Query: 227 -APAIIQGDTEWYNIVSWTHYAMVTAEEL 254
               + +GDTE Y  +      +  + E 
Sbjct: 231 GGIGVRKGDTETYKKIEDGLNKIKASGEY 259


>gi|260462683|ref|ZP_05810889.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259031589|gb|EEW32859.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 285

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 12/245 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
               +  I     S +       D+K+ G L          F  + A+G   G  ++   
Sbjct: 10  LTLAISTIAWGGVSRAAEVPKSTDVKQSGTLAVANTLDYAPFEYLDADGKQTGIIIELAG 69

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +    +K+             L + +  I       T  R     + F       
Sbjct: 70  EVAKLV---DAKLDVQRTPFPSMIPGLAAGRFKIAWETFSATPER--LKQVDFVMFLKAG 124

Query: 126 GQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVE 180
                   KK   S  + L G  + V AG+ ++  +     +            VF    
Sbjct: 125 LAVSTSPDKKANFSGDTPLCGKRVGVSAGSASDFLVDKLGKECIDKGQSAIEKSVFNSST 184

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +I  A  + R DA   D +   +         + V+LP +   +PL  AI + D E  ++
Sbjct: 185 DIVQAVLSDRVDARMDDAT--ASSYFEVTSKGQLVVLPTLYEVAPLGMAIAKDDKETADM 242

Query: 241 VSWTH 245
           +    
Sbjct: 243 MVGAL 247


>gi|47569970|ref|ZP_00240634.1| periplasmic amino acid binding protein [Bacillus cereus G9241]
 gi|47553368|gb|EAL11755.1| periplasmic amino acid binding protein [Bacillus cereus G9241]
          Length = 263

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 9/243 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +      +  +           +K G + G   F   +   + KGFD
Sbjct: 1   MRKSSLLLTLALTVSVGLLSACGSDTASKKTDEKVVKVGTSAGRSPFIFKEGE-NVKGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A +         +++   + +  F  L S +ID ++     +  R+      F  
Sbjct: 60  AEIIEAAAKKAGYK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSI 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G  F + K    I S+  L G ++ V  GT  E  L    K +         +  
Sbjct: 115 PYVYSGSVFAVKKDNNTIKSLEDLKGKTVGVGLGTAGEQELKALNKDNAFTIKTFSEDPT 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DAY  D   +          +  V    +     +A    +   +  N
Sbjct: 175 AE-LNEVGLGRVDAYYNDKVQVETTITKAKLDNVKVGFGPLEWGE-IAFPFAKKSEKLEN 232

Query: 240 IVS 242
           I  
Sbjct: 233 INK 235


>gi|227501171|ref|ZP_03931220.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
 gi|227216572|gb|EEI81976.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
          Length = 521

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 91/290 (31%), Gaps = 38/290 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVG--FAEVKAN----- 53
           M K     +L +++LF      NAS      +    + G+        F+EV        
Sbjct: 1   MKK-ILRMMLAIVLLFTPFCRANAS------QEDTFRVGMEVNYAPYNFSEVDDKNGGCP 53

Query: 54  -----GDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                G++  G+DV F + ++  +      ++   +       AL S +ID +      T
Sbjct: 54  VANSPGEFANGYDVQFAKKIADGLGKK---LEIYKIEWDGLIPALTSGKIDAIIAGMSPT 110

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
             R     + F    Y      +  K        S++  +GA I  Q GT     +    
Sbjct: 111 EER--LKQIDFSVPYYHASMVVVTQKDSKYVNAKSINDFAGAKITAQLGTFHVAMIDQMK 168

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPD 219
             +  +      +    + AA  A   D Y  + +   +   +N +       +      
Sbjct: 169 GVNKQE----PMDSFPTMIAAANAGTIDGYISEEAGAQSAIASNPKLTYIKFEDGKGFET 224

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
               + +   I +        V+    +M   +E       + +++ +  
Sbjct: 225 KDEDTTVGVGIAKNSP-LTAQVNKILSSMDIPKEQEEIMAKMTKLTANEK 273


>gi|90413733|ref|ZP_01221721.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Photobacterium profundum 3TCK]
 gi|90325202|gb|EAS41699.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Photobacterium profundum 3TCK]
          Length = 251

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +   + +    S +  A+          +K G++     F  VK +   +GF+
Sbjct: 1   MKSWVKTTFTAVALTLAASQTVMAAT--------DVKVGMSGRYFPFTFVKMD-QLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +      +   ++Y+  +    F  L++ +ID +S     T  R+      F  
Sbjct: 52  VDLWDEIGKR---NDYNVEYVTASFSGLFGLLETGRIDTISNQITITPERQA--KFLFAE 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG   ++ K    I S + L+  ++ V  G+  E  L     A  +          
Sbjct: 107 PYVIDGAQLVVRKGNNDIKSTADLADKTVGVNLGSNYEQLLRQLDNAAQINIK----TYD 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I+      R DA+  D  +   L    + P E    P    ++       +   +  N
Sbjct: 163 AGIEHDVALGRTDAFVMDRLSSIELIKKANLPLELAGEPFETIENAWPFVKNEKGEKLRN 222

Query: 240 IVSWTHYAM 248
            V+    AM
Sbjct: 223 EVNTALNAM 231


>gi|323350416|ref|ZP_08086079.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123353|gb|EFX95031.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 521

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 29/255 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K        L++   T+          I+   +L+ G+      F       +NG  K
Sbjct: 1   MKKLLLTLFTALLVALGTA--------QVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++    +      AL S +ID++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIAQEMGKEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +S   L          +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLLVRKDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  +   D Y  +       +  N                    
Sbjct: 167 GAKKETAMGDFAQMRQALESGVIDGYISERPEALTAETANSNFKMIQFEKGFEVGEEDAS 226

Query: 226 LAPAIIQGDTEWYNI 240
           +A  + + D+     
Sbjct: 227 IAIGMRKDDSRIEQA 241


>gi|308175100|ref|YP_003921805.1| cystine ABC transporter binding protein [Bacillus amyloliquefaciens
           DSM 7]
 gi|307607964|emb|CBI44335.1| cystine ABC transporter (binding protein) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 270

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 63/203 (31%), Gaps = 5/203 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     V  L +  +   S            ++    +  G  T       +   G   G
Sbjct: 1   MKIKLAVMSLTIAAMAALSACGAGGEAASGNQKNVKNITVGTGTQFPNICFIDDKGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+  + L   +     +  +  ++     ++L   ++DI++   + +  RE       
Sbjct: 61  YDVELVKELDRRL--PDYRFTFKTMDFSNLLVSLGQHKVDIVAHQMEKSAEREKKFLFNQ 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                F  +  ++ +   I  +  L G  +     +   L L  + + H   +      +
Sbjct: 119 VAYNNFPLKITVLQENGNIHGIDDLKGKRVITSPTSNGALVLKKWNEKHGSPFEIAYAGQ 178

Query: 179 -VEEIDAAYRAHRCDAYTGDISA 200
              +     ++ R DA      A
Sbjct: 179 GSNDAANQLKSGRADATISTPFA 201


>gi|327472311|gb|EGF17742.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 521

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 29/255 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K        L++   T+          I+   +L+ G+      F       +NG  K
Sbjct: 1   MKKLLLTLFTALLVALGTA--------QVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++    +      AL S +ID++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIAQEMGKEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +S   L          +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLLVRKDGKYASAKTLEDFKDAKVT-SQQGVYLYNLIDQLP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  +   D Y  +       +  N                    
Sbjct: 167 GAKKETAMGDFAQMRQALESGVIDGYISERPEALTAETANSNFKMIQFEKGFEVGEEDAS 226

Query: 226 LAPAIIQGDTEWYNI 240
           +A  + + D+     
Sbjct: 227 IAIGMRKDDSRIEQA 241


>gi|297562616|ref|YP_003681590.1| extracellular solute-binding protein family 3 [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296847064|gb|ADH69084.1| extracellular solute-binding protein family 3 [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 310

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 15/261 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCRALSSAIFDDPSKIQYL 81
            A +  D+ + G +  G+         + A+G+   GF+VD   A  + +  +     + 
Sbjct: 55  AALVPADVAEAGTVTIGVEASYPPGEYLDADGETVLGFNVDLVNAALAKLGLEA---TWE 111

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P       + + +   D+ S +   T  R     +          Q F            
Sbjct: 112 PTAFDSIIIGVDTGTYDLGSSSFTVTEER--MEQVNMISYFSSGTQWFAQAGNPQDVDPD 169

Query: 142 QLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              G  I VQ+ TT +  + +       A         FE          +   DA   D
Sbjct: 170 NACGMRIAVQSNTTHDTDIEERSAACVDAGEEAITIQKFESQPLATETVVSGVNDASLAD 229

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT----AEE 253
           +                  + +  + +P      + DTE    V+    A++     AE 
Sbjct: 230 MPTSAYALEQTGEGV-LEFIGEQYNAAPYGILTNKEDTELAEAVAAAFNALIEDGTYAEV 288

Query: 254 LGITQKNINQVSKDTTNPDVQ 274
           LG    +   +     NPDV 
Sbjct: 289 LGEWGVDAGGMESAEVNPDVA 309


>gi|301801564|emb|CBW34258.1| putative periplasmic solute-binding transport protein (pseudogene)
           [Streptococcus pneumoniae INV200]
          Length = 254

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 11/185 (5%)

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D++    L+  +      ++Y+ ++A  R   L S ++DI   N   T  R+    + F
Sbjct: 43  YDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANFTVTDERKK--QVDF 97

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                    G +  K   I+ V QL G ++ V  GTT E      F+ ++ +     +++
Sbjct: 98  ALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----FEKNHPEIKLQKYDQ 153

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +   A    R DA++ D + + A     +     V +  +     +A A+ +G+ E  
Sbjct: 154 YSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPDTIAAAVQKGNQELL 211

Query: 239 NIVSW 243
           + ++ 
Sbjct: 212 DFINK 216


>gi|197334002|ref|YP_002154780.1| cystine-binding protein [Vibrio fischeri MJ11]
 gi|197315492|gb|ACH64939.1| cystine-binding protein [Vibrio fischeri MJ11]
          Length = 250

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 80/215 (37%), Gaps = 11/215 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K G++     F  VK +   +GF+VD    +      +   ++Y+  +    F  L++
Sbjct: 26  EVKVGMSGRYFPFTFVKQD-KLQGFEVDLWDEIGRR---NDYNVEYVTASFSGLFGLLET 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAG 153
            +ID +S     T  RE      F      DG    + K    I S+  L+G ++ V  G
Sbjct: 82  GRIDTISNQITKTKEREA--KYLFANPYVVDGAQITVRKGNDSIKSIEDLNGKTVAVNLG 139

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L D+ K+   + +   ++   E        R DA+  D  +   L   +  P +
Sbjct: 140 SNFEKLLRDHDKS--EQINIKTYDTGIE--HDVALGRADAFVMDRLSAAQLIKKSGLPLQ 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               P    ++       +   +    V+    AM
Sbjct: 196 LAGKPFETIENAWPFVNNEKGQKLQKEVNQALNAM 230


>gi|78186898|ref|YP_374941.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166800|gb|ABB23898.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Chlorobium luteolum DSM 273]
          Length = 990

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    K   LK G+       + +  + +  GFD +  R +   +      +++  +  
Sbjct: 157 TLEVPTKGEVLKIGVTATREPMSFMDRDAEVSGFDGELARIIGRVL---RRPVEFHNMKF 213

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-----KKGISSV 140
                ALQS +ID++      T  R+    + F    + + Q  ++          +  +
Sbjct: 214 MGLIPALQSAKIDLVITGMTATAERKR--SVDFTKTYFENAQVMLVKTAAPHGDGKVRVL 271

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  + V +G+  +L     F+        +V E   +   A    + DA+  D S 
Sbjct: 272 KDIDGKRVAVLSGSAGDLAARRRFR----DSEFLVMENAADAAVALNTRKADAFIYDRSV 327

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           L  +          VIL + ++K  +A A+ +G+T   + ++    A   
Sbjct: 328 LENIARQEPG---LVILGEPVAKLEVAAALKKGNTALASELNEAIGAFTE 374



 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 74/222 (33%), Gaps = 23/222 (10%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G    L  F+   ANG+  G D++  R + + +      I  + +       ALQ+
Sbjct: 406 ELRMGTCATLAPFSYH-ANGEITGLDIELARMIGNRLQKK---ITLVDMPFGALIPALQA 461

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGIS---------SVSQLS 144
            +ID    N + T  R+    + F       D    ++      +         S   L+
Sbjct: 462 GKIDFALSNFNVTEERKKL--ILFSRPYLQNDISALVLRSAAAPAAPVSEGASLSAPDLN 519

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  + V  G+T +     ++         + ++   +I  A ++ + DA    I     L
Sbjct: 520 GTRVAVLLGSTHDTYALSHYP----NATLLQYKTPSDIILAVKSGKVDA---GIYTTETL 572

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +          +   ++   P+A    + +       +    
Sbjct: 573 REIFRADPSLELKGGVLFSVPVAMGFNKQNDSLREQFNVFLQ 614



 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 31  KKRGFLKCGINTGL-VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +  G L+ G+ +   + F  +  N    GFD +     ++ +  +   I+   ++     
Sbjct: 644 RANGVLRVGVVSDKGLPF-MIVKNNRLVGFDEELAERFAAYLGKE---IKTSDMDFGNLI 699

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            A  + +ID+++     T  R  +L ++F    Y  G    + K
Sbjct: 700 AAAATNKIDMIASTLMITPER--ALQISFSDPYYEIGASAFVMK 741


>gi|238855887|ref|ZP_04646176.1| amino acid ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|282931561|ref|ZP_06337058.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|238831550|gb|EEQ23898.1| amino acid ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|281304317|gb|EFA96422.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
          Length = 534

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 86/300 (28%), Gaps = 30/300 (10%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------ 53
           M  K+ ++ IL  ++     F  N   +   K  G L+ G+      +   + N      
Sbjct: 1   MKSKNTWLVILAFLMASIGFFGNNNQEVQAAKSNGVLRIGLEANYPPYNWTQTNSSNGAI 60

Query: 54  ---GDWK---GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              G      G+DV               K+  +         AL S +ID++      T
Sbjct: 61  PIEGSKTYANGYDVQIA---KLIGKKLGKKVVAVKTEWDGLLPALTSGKIDLIIAGMSPT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYF 164
             R     + F           I     K     S++  +GA +  Q GT       D  
Sbjct: 118 AERRK--AINFSNPYRKSTFVVITKSNSKYANAKSLTDFAGAKLTAQQGTLHY----DLI 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK- 223
           K           +    +  +  +   D Y  +     + K      +   I        
Sbjct: 172 KQLKGAVRENAMKDFAAMRQSLISGTIDGYVAEDIEAQSFKSVYPNSTAINISKMPGFHV 231

Query: 224 ----SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
               S  +  + +G+ +    V+     +  ++   + +  + +     ++     F+  
Sbjct: 232 SASDSETSIGVKKGNDKLLAQVNAALATISNSKRDQLMETAVKEQPSTDSDKKTNWFVST 291


>gi|297199924|ref|ZP_06917321.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces sviceus ATCC 29083]
 gi|197710392|gb|EDY54426.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces sviceus ATCC 29083]
          Length = 301

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 12/246 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S +    +L  ++  G ++ GI    + F  +  NGD  G   +  + +   +  D
Sbjct: 37  VATASTTGGGELLDRLRAAGVVRLGIAGE-IPFGYIDKNGDLTGEAPELAKVIFKRLGVD 95

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             ++Q +P         L S+Q D+++     T  R     + F    Y     FI+ K 
Sbjct: 96  --RVQPVPTEFGSLIPGLNSQQFDVVAAGMYVTPER--CEQVIFADPDYQMLDSFIVRKG 151

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               + +   +         G T    +    +A   +   ++         A  A R D
Sbjct: 152 NPKGLHNYKDVVAKKAKFATG-TGYAEIGYAVEAGYKESDILIVPDQVAGLNAVEAGRVD 210

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
            + G       +   + +          +   P     A A  + +T   +  +     +
Sbjct: 211 VFAGTALTTREVVKKSAKAEATKAFTPTVDGKPHIDGGAFAFRRTETNLRDAFNVELRKL 270

Query: 249 VTAEEL 254
             + EL
Sbjct: 271 KKSGEL 276


>gi|317053111|ref|YP_004119465.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316953438|gb|ADU72909.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 288

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 80/264 (30%), Gaps = 19/264 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVK-ANG 54
           M        + +++    + +  A  L       I+  G L  G +              
Sbjct: 1   MKIRKTYYAIIMMVSGLLANTAMAQNLHDQLPATIRDAGKLVVGTSPTYPPLEYKDVTTM 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + KG D+D    ++  +      I++      +   +L + +I++ +        R    
Sbjct: 61  ELKGLDIDLATEIAHRLG---LGIEWKEAAFDQLINSLATGRINMGASGMTDIASR--RG 115

Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHN 168
            + F        Q F +     G+   S + G  + V       + L +        +  
Sbjct: 116 KVDFVDYFSTGSQLFTLKTLGAGLKQPSDVCGKPVAVNRNGIFYIRLQEFNQRVCQASGL 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPL 226
                 + ++  +     +  R  A    + A+  L    D P   ++ ++ + I+    
Sbjct: 176 ADIQYWLVDKTADARLQMQQKRVLAAVQGVDAIRYLNEQPDSPDKGKYQLIGEPIAVDYA 235

Query: 227 APAIIQGDTEWYNIVSWTHYAMVT 250
                +  T   ++V      M+ 
Sbjct: 236 GFGFAKDQTVLRDLVVKALNEMIA 259


>gi|125718753|ref|YP_001035886.1| amino acid ABC transporter permease/amino acid-binding protein
           [Streptococcus sanguinis SK36]
 gi|125498670|gb|ABN45336.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein, putative [Streptococcus sanguinis SK36]
          Length = 521

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 71/255 (27%), Gaps = 29/255 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K        L+I   T+          I+   +L+ G+      F       +NG  K
Sbjct: 1   MKKLLLTLFTALLIALGTA--------QVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++    +      AL S +ID++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIAQEMGKEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +S   L          +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLLVRKDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  +   D Y  +       +  N                    
Sbjct: 167 GAKKETAMGDFAQMRQALESGVIDGYISERPEALTAETANSNFKMIQFEKGFEVGEEDAS 226

Query: 226 LAPAIIQGDTEWYNI 240
           +A  + + D+     
Sbjct: 227 IAIGMRKDDSRIEQA 241


>gi|54307244|ref|YP_128264.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Photobacterium profundum SS9]
 gi|46911664|emb|CAG18462.1| Putative amino acid ABC transporter, periplasmic amino acid-binding
           portion [Photobacterium profundum SS9]
          Length = 251

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++  + +    S +  A+          +K G++     F  VK +   +GF+
Sbjct: 1   MKIWVKTTLTAVALTLAASQTVMAAT--------DVKVGMSGRYFPFTFVKMD-QLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +      +   ++Y+  +    F  L + +ID +S     T  R+      F  
Sbjct: 52  VDLWDEIGKR---NDYNVEYVTASFSGLFGLLDTGRIDTISNQITITPERQA--KFLFAE 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG   ++ K    I S + L+  ++ V  G+  E  L     A  +          
Sbjct: 107 PYVIDGAQLVVRKGNTEIKSTADLADKTVGVNLGSNYEQLLRQLDNAAQINIK----TYD 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             I+      R DA+  D  +   L    + P E    P    ++       +   +  N
Sbjct: 163 AGIEHDVALGRTDAFVMDRLSSIELIKKANLPLELAGEPFETIENAWPFVKNEKGEKLRN 222

Query: 240 IVSWTHYAM 248
            V+    AM
Sbjct: 223 EVNTALNAM 231


>gi|238650363|ref|YP_002916215.1| glutamine-binding protein [Rickettsia peacockii str. Rustic]
 gi|238624461|gb|ACR47167.1| glutamine-binding protein [Rickettsia peacockii str. Rustic]
          Length = 241

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +            +    L  G       +  ++ +G+  G D
Sbjct: 1   MK---FLKIFLLSCLLVSC--------EKKETEKTLIVGTAADNPPYEFIQ-DGEIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      +     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAISERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSVTPERAEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I +   L    + VQ G+  E    D   +  +           
Sbjct: 104 NYATARFAIIYRTGDNIQNSKDLENKIVGVQLGSVLEKKAHDL--SQTINIKVHSLANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKARVIDAIISEEFQCKKLKENNSN 191


>gi|218462903|ref|ZP_03502994.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           Kim 5]
          Length = 196

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 41/214 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +++  ++       + NA  +     R  L          +  +   G+  GFD
Sbjct: 1   MKRTLLLALSLVV------CANNAGAMD----RKTLTIASEGASPPWNAITPQGELAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L   +     +  ++P +      AL   + D +      T  R+ S+   F  
Sbjct: 51  IDVGRDLCRRM---KFECTFVPQDWDGIIPALTVGKFDAIMSGMAITEKRKKSIA--FSK 105

Query: 121 ITYFDGQGFIMHKKKGISSVS-----------------------QLSGASICVQAGTTTE 157
                    ++ K   +                            L+G ++ V   + +E
Sbjct: 106 PYAGGFNQLVILKDLDLPPTDTSAELDLTTIDPEKQAKIEELRAALNGRTLGVLRSSNSE 165

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
             L + F           ++  + +     A R 
Sbjct: 166 AVLNELF---GKVATIRSYDSQDNMHLDLVAERI 196


>gi|295111600|emb|CBL28350.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Synergistetes bacterium
           SGP1]
          Length = 277

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 11/199 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K    +++ L + F    +  A+      +R  ++         F        +W GF
Sbjct: 1   MKKALLSALI-LGLGFVVCTAAVAAAAEKDAER-VIRVATPGTYAPFTMYDELTQEWSGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +++  R +      +   I+++ L+    F  L   ++D +++    T  R       F 
Sbjct: 59  EIELWRLIGEKAGYE---IEFVRLDLPATFAELDLNRVDTVAKQISITPAR--QQKYNFT 113

Query: 120 -PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
            P  +      +      I S   + G SI +  G+     +A     + +K     +E 
Sbjct: 114 QPFFFSPYYIIVAEDNNEIKSWKDMEGRSIALAEGSAMNEFIAALDPENKVKKSV--YES 171

Query: 179 VEEIDAAYRAHRCDAYTGD 197
            + +       R DAY G 
Sbjct: 172 DKLVFQEVSVGRVDAYPGP 190


>gi|209544208|ref|YP_002276437.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531885|gb|ACI51822.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 499

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 36  LKCGINTGL-VGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           L+   +    V F            G++ D  +A++  +       Q++  +       L
Sbjct: 23  LRWASDAEANVPFVFHDPADQSRLTGYEYDIAQAIARRLG---RPTQFVQNDWDGLIPGL 79

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQ 151
           Q    D++    + T   E   G+ F    Y   +   +   ++G+ +++ L G  +   
Sbjct: 80  QRGLYDMVIDGIEITPEHE--QGVLFSHPYYVTSERITVRRDQQGLDTLAALRGHVVGTL 137

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             TT E  L       +       +E         +  R DA   D +   AL      P
Sbjct: 138 KDTTAERMLQ-----ADPTIRIRSYEEETNAYTDLKNGRLDAVLLDGTI--ALYYGAPDP 190

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
               ++ D I +     A  QG+T   + V+     M+   EL
Sbjct: 191 G-LKLVGDPIGRVAYGVAFAQGNTTLRDQVNTALDGMIRDGEL 232


>gi|85714007|ref|ZP_01044996.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
 gi|85699133|gb|EAQ37001.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
          Length = 299

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 67/219 (30%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F     +G   GF+VD  R L   I              +    AL  
Sbjct: 69  VIRFLTETDYPPFNYTGPDGKPTGFNVDLARTLCEEI---KVTCTIQMRRFETLVDALSG 125

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
            + D +  +   T   E+   + F    Y     F+  +   +       L G  + V A
Sbjct: 126 NRGDAIIASLAVTP--ELRKRIDFTDPYYRTPARFVSRRGTVMAEVRPEYLEGKKVGVIA 183

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G++ E  L  +F           +   E +  A R +  D   GD  +L       D  S
Sbjct: 184 GSSHEAYLKAFF----TDAELHGYPNAETLRQALRRNEVDFIFGDAISLAFWINGTDSES 239

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +  A+ +G+      ++W  +
Sbjct: 240 CCAFSGGPFIESRYFGEGIGIAVRKGNDVLRQALNWALF 278


>gi|84688030|ref|ZP_01015892.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84663970|gb|EAQ10472.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 243

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 63/211 (29%), Gaps = 17/211 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       F  +  NG+  GF+ +   A+           +++          L S
Sbjct: 26  TVRMGTEGAYPPFNFLNDNGEVDGFERELGDAICETAG---LTCEWVTNEWDSIIPNLVS 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  R+    + F    +               ++S     +  + A T
Sbjct: 83  GNYDTIIAGMSITDERDEV--IDFTEAYF-------PPDPSSFVAMSDAFDGTGVIAAQT 133

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            T   +     A       + F   +E  AA +    DA   D S L  +    +     
Sbjct: 134 GT---IQASHVASMDGAQLVEFATPDETIAAVKNGEADAVLADKSFLEPIVA--EDSDLM 188

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               D++    +   + + DTE  + ++   
Sbjct: 189 FAGDDVMLGGGIGLGVRESDTELKDKLNAAI 219


>gi|327468260|gb|EGF13745.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 521

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 69/252 (27%), Gaps = 26/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K        L++   T+          I+   +L+ G+      F       +NG  K
Sbjct: 1   MKKLLLTLFTALLVALGTA--------QVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +  +P  ++    +      AL S +ID++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKKIAQEMGKEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    +S   L          +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLLVRKDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLP 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                       ++  A  +   D Y  +       +  N                  A 
Sbjct: 167 GAKKETAMGDFAQMRQALESGVIDGYISERPEALTAETANSNFKMIQFEKGFEVGEEDAS 226

Query: 229 AIIQGDTEWYNI 240
             I    +   I
Sbjct: 227 IAIGMRKDDNRI 238


>gi|78186724|ref|YP_374767.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166626|gb|ABB23724.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Chlorobium luteolum DSM 273]
          Length = 990

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    K   LK G+       + +  + +  GFD +  R +   +      +++  +  
Sbjct: 157 TLEVPTKGEVLKIGVTATREPMSFMDRDAEVSGFDGELARIIGRVL---RRPVEFHNMKF 213

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-----KKGISSV 140
                ALQS +ID++      T  R+    + F    + + Q  ++          +  +
Sbjct: 214 MGLIPALQSAKIDLVITGMTATAERKR--SVDFTKTYFENAQVMLVKTAAPHGDGKVRVL 271

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             + G  + V +G+  +L     F+        +V E   +   A    + DA+  D S 
Sbjct: 272 KDIDGKRVAVLSGSAGDLAARRRFR----DSEFLVMENAADAAVALNTRKADAFIYDRSV 327

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           L  +          VIL + ++K  +A A+ +G+T   + ++    A   
Sbjct: 328 LENIARQEPG---LVILGEPVAKLEVAAALKKGNTALASELNEAIGAFTE 374



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 74/222 (33%), Gaps = 23/222 (10%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G    L  F+   ANG+  G D++  R + + +      I  + +       ALQ+
Sbjct: 406 ELRMGTCAALAPFSYH-ANGEITGLDIELARMIGNRLQKK---ITLVDMPFGALIPALQA 461

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGIS---------SVSQLS 144
            +ID    N + T  R+    + F       D    ++      +         S   L+
Sbjct: 462 GKIDFALSNFNVTEERKKL--ILFSRPYLQNDISALVLRSAAAPAAPVSEGASLSAPDLN 519

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  + V  G+T +     ++         + ++   +I  A ++ + DA    I     L
Sbjct: 520 GTRVAVLLGSTHDTYALSHYP----NATLLQYKTPSDIILAVKSGKVDA---GIYTTETL 572

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +          +   ++   P+A    + +       +    
Sbjct: 573 REIFRADPSLELKGGVLFSVPVAMGFNKQNDSLREQFNVFLQ 614



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 31  KKRGFLKCGINTGL-VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +  G L+ G+ +   + F  +  N    GFD +     ++ +  +   I+   ++     
Sbjct: 644 RANGVLRVGVVSDKGLPF-MIVKNNRLVGFDEELAERFAAYLGKE---IKTSDMDFGNLI 699

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            A  + +ID+++     T  R  +L ++F    Y  G    + K
Sbjct: 700 AAAATNKIDMIASTLMITPER--ALQISFSDPYYEIGASAFVMK 741


>gi|118472644|ref|YP_890807.1| secreted protein [Mycobacterium smegmatis str. MC2 155]
 gi|118173931|gb|ABK74827.1| secreted protein [Mycobacterium smegmatis str. MC2 155]
          Length = 324

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 79/242 (32%), Gaps = 14/242 (5%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSA 70
           +I       + +A++   I +   +  G N           +G    G++VD  +A+++ 
Sbjct: 57  VIAAIEADPALSAALPPAIAQSKTINLGSNIQSAPNNFYAGDGKTPIGYEVDLAKAIAAK 116

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +           +       +LQS ++D+     + T  R     + F    +  G   +
Sbjct: 117 LGVQAKH---QDMAFGSLITSLQSGRVDMTMAAMNDTKER--QQQIDFVD-YFSSGITIM 170

Query: 131 MHKKKG--ISSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDA 184
           + K     I+    L G ++ V  GT+ +   A       +      +    +   +   
Sbjct: 171 IQKGNPENITGPDSLCGKNVAVVQGTSHQKFAAAQSQRCEQEGKPAVNVTATDSDTQNQN 230

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSW 243
             R  R  A   D+ +   +  T    +   ++P   I   P      + +    + V+ 
Sbjct: 231 QLRTGRVAAILNDLPSAVYISRTAGDGNAFEVVPGPPIEGGPYGIGFNKDNVALRDAVAK 290

Query: 244 TH 245
             
Sbjct: 291 AL 292


>gi|330444279|ref|YP_004377265.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Chlamydophila pecorum E58]
 gi|328807389|gb|AEB41562.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila pecorum E58]
          Length = 252

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 79/260 (30%), Gaps = 23/260 (8%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   +++  + +L               K++     G N     +  V + G   G
Sbjct: 1   MKLFKRVLITVGVISLLVLLCGCHEK------KRQDVWVVGTNATYPPYEFVDSQGKVVG 54

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVD  +ALS  +       ++         L L+  +ID +      T  R   + +  
Sbjct: 55  FDVDLAQALSRKLGKTLEVQEF---AFDALILNLKQHRIDAILAGMSITQDRLKEIHMIP 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      +   K     +S+ S  S+ VQ GT  E  L               F+ 
Sbjct: 112 YEGEELRELTLVSKNKHPNKDLSKYS--SVAVQTGTFHEEFLRTL-----PGVRIRSFDT 164

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDT 235
             E+    R ++      + +   A    N+ P  H     LP+          I +   
Sbjct: 165 ALEVMMEVRYNKSPVAIFEPT--VARLALNEFPEIHPTVYPLPESFWVLGNGIGIAKDRP 222

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V    + +  + E  
Sbjct: 223 EHKEEVLKALHEIKESGEFA 242


>gi|282857321|ref|ZP_06266558.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Pyramidobacter piscolens W5455]
 gi|282584821|gb|EFB90152.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Pyramidobacter piscolens W5455]
          Length = 505

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 67/197 (34%), Gaps = 16/197 (8%)

Query: 35  FLKCGINTGLVGFAE--VKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            LK  ++     F    +   G+    G+D+D   A+++ +       + +  N K    
Sbjct: 32  KLKMAVSPTFPPFEFERLDEQGNARIVGYDIDMVDAIAAELG---FTYELVHTNFKGLMG 88

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            L S ++D +      T  R  +  + F    Y+     I HK   I +V+ L G  I  
Sbjct: 89  ELASHRVDFVVSGMSPTEERRKT--VDFSVPYYYCQTSIIQHKGANIKTVADLKGKRIAA 146

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             GT      AD+ +A       +             A R D    D  A  ++++    
Sbjct: 147 SFGTQY----ADFAEAAGAVVAAMDSSTYS--MQELLAGRADGVVQDA-ASASIRVKQHP 199

Query: 211 PSEHVILPDIISKSPLA 227
             E+ +LP         
Sbjct: 200 GLEYFVLPQDELDKVQG 216



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 59/194 (30%), Gaps = 15/194 (7%)

Query: 37  KCGINTGLVGFAE--VKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           K  IN     F    V   G+    GFD+D   A+++A+       +   +N       L
Sbjct: 277 KLAINATFAPFEFAQVNDTGESVITGFDIDVLDAIAAALG---FTYEIKDMNFSGLIGEL 333

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            S + D +      T  R     + F    YF     +      + +++++ G  I    
Sbjct: 334 HSGRADFVISGLSDTEERRK--SVDFSVPYYFCKTAIVSPAAAPLKNMAEMKGKKIATVF 391

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     +            P + +    +       R D    D S        N    
Sbjct: 392 GTEYAKVVEA------SGSIPTLLDNSTMVTQELLNGRVDGAVMDASQAKTKCEQNGGYV 445

Query: 213 EHVILPDIISKSPL 226
            HVI  + +  +  
Sbjct: 446 YHVIPNEDLESAHY 459


>gi|312194703|ref|YP_004014764.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c]
 gi|311226039|gb|ADP78894.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c]
          Length = 311

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 13/222 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPS 76
           ++ ++  + L        L    +           +G    G D D  +AL +A+    +
Sbjct: 53  SAATSAVATLPAALAGKTLTAAADASYAPNEFFDTDGKTVIGMDADLIKALGTALG---T 109

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKK 135
           K+    +   +   AL + + +I   +   T  RE    + F          F    K  
Sbjct: 110 KVDVKNVGFDDIIPALDAGKYNIGISSFTDTKEREA--KVDFVTYFSAGTSFFTSADKPA 167

Query: 136 GISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            + ++  L G ++ V+ GTT              A         F      + A  + R 
Sbjct: 168 SVKTLDDLCGLTVAVEKGTTQADDATAQDGTCKTAGKPGVTVSQFPDQNGANLALTSGRA 227

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              +   S +   ++         ++      +P   A+ + 
Sbjct: 228 Q-VSMADSPVADYQVKLSDGK-LKLVGTPYGTAPYGIAVPKN 267


>gi|261404657|ref|YP_003240898.1| prephenate dehydratase [Paenibacillus sp. Y412MC10]
 gi|261281120|gb|ACX63091.1| Prephenate dehydratase [Paenibacillus sp. Y412MC10]
          Length = 286

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 35/269 (13%)

Query: 2   YKDFFVSILCLIILFFTSFS------------------------TNASILGDIKKRGFLK 37
            K     ++ L ++     +                          AS L +I +RG+++
Sbjct: 6   KKVLLAGVVSLSLVATGFAANEVLTSPEVSAKSASANAPGQLKKQAASQLDEIIERGYIR 65

Query: 38  CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G+      F  +     +++G+DVD    L   +  +   ++Y+          LQ+ +
Sbjct: 66  VGMTGDYKPFTYLNPATKEYEGYDVDAMEELGKDLGVE---VRYVNTTWSNMMKDLQADK 122

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGT 154
            DI          R+ +  ++   I++          K    +V  ++     I V  G 
Sbjct: 123 FDIAVGGVTRNTARQKTAYVSQGYISFGKAPLIRAEDKDKYLTVEDINKPSVRIGVNPGG 182

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E+ + ++    N      V     +I         D    D +         D     
Sbjct: 183 TNEVFVREHLTKAN----VTVVPNNLDIPHLVADGTYDVMITD-TIEAITYAKADSRLYA 237

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            +     + S     I +GD E+ + +  
Sbjct: 238 ALTDKPFTNSEKGYMIPRGDFEYASYLEM 266


>gi|330445260|ref|ZP_08308912.1| membrane-bound lytic murein transglycosylase F [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489451|dbj|GAA03409.1| membrane-bound lytic murein transglycosylase F [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 497

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 78/234 (33%), Gaps = 16/234 (6%)

Query: 12  LIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +  L  +           L  I++ G L+ G     + +  + A+G   G D +  +  +
Sbjct: 1   MFTLLLSGCQWQDKPQDALERIRESGVLRVGTLNNQLSY-YIGADG-PTGLDYELAQRFA 58

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +                 F AL++  +DI++     T  R    G    P  Y+  Q 
Sbjct: 59  KELGVKLE--MQTMFTLSGLFPALKNGDVDIVAAGLTVTPQR--LDGFHPAPAYYYASQV 114

Query: 129 FIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDA 184
            +  K   +         +  ++ V + ++ E  L +  K + N+ +  I    ++++  
Sbjct: 115 VVYKKGKRRPRDLEELANTHRTLAVVSSSSHERQLEELKKKYPNLTWQSIKETDIDDLLR 174

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                  D    D   +    L    P   + L ++    P++  +   + +  
Sbjct: 175 KVANGELDYTVADSVDVA--LLQRTHPEIAIAL-ELTEDEPISWFVKDSNNDSL 225


>gi|262089612|gb|ACY24710.1| ABC amino acid transporter EhuB periplasmic amino acid-binding
           protein [uncultured organism]
          Length = 280

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 69/256 (26%), Gaps = 15/256 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             AS L  IK    ++ G       FA    +G   G   +    +   +      I  +
Sbjct: 25  AQASTLDKIKDSSSVRIGYANET-PFAYTALDGKVTGESPEIVTKIFEKMGVK--TISPV 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SV 140
                     L++ + D+++     T  R     + F    Y      ++      +   
Sbjct: 82  LTEWGSLIPGLRASRFDLIAAGMYITPER--CKQVLFTDPHYQLPDTLLVASGNPKNLGS 139

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                 S    A  +  + L     A       +          A R+ R DA  G    
Sbjct: 140 YDDIAKSGAKVAIMSGTVNLGYARSAGIKDAQILQVPDTTAQLQAVRSGRADAAVGTQLT 199

Query: 201 LYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE----- 253
           +  L        E       D       A A    D +  + V+      + +EE     
Sbjct: 200 MKGLAEKGGDKVEAIADFKDDPAHTGYGALAFRPEDKDLRDAVNAEMKKWIGSEEHLATV 259

Query: 254 --LGITQKNINQVSKD 267
              G  Q NI + +  
Sbjct: 260 KPFGFDQSNITEKTAA 275


>gi|260430320|ref|ZP_05784294.1| ABC transporter substrate-binding protein [Citreicella sp. SE45]
 gi|260418792|gb|EEX12048.1| ABC transporter substrate-binding protein [Citreicella sp. SE45]
          Length = 273

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 15/256 (5%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58
           M +    ++    + L   + + ++  +  +K+ G L+ G+ +    F      +  W G
Sbjct: 1   MKRRSLILAATAAMALAPMAHAQDSGTMAQVKETGELRIGVASAEPWF-YKDPMSEQWTG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
             V   + ++  +      ++            LQ+ Q D +    D T  R+ +L    
Sbjct: 60  VGVAMGQRMADDLGVKMVPVE---TTWANAVAGLQANQFD-IMFVLDPTEERKKALSFPE 115

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
            P+ Y+     +    +             I V  GT+ +  +++             F 
Sbjct: 116 NPLFYYAMGALVKEGSEAKTWDELDTPETRIGVTLGTSLDRNVSEMMDEA----QISRFS 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-TE 236
             +E  AA+ A R DA      AL             V+LP+ ++    +  + Q D TE
Sbjct: 172 SNDEAIAAFAAGRIDAVVQFHPALVVQYSRLK--MGEVLLPEPVNPVATSAGMRQEDGTE 229

Query: 237 WYNIVSWTHYAMVTAE 252
           + + V+ T   +  A 
Sbjct: 230 FLDWVNTTFADLYAAG 245


>gi|67459523|ref|YP_247147.1| amino acid ABC transporter substrate-binding protein [Rickettsia
           felis URRWXCal2]
 gi|67005056|gb|AAY61982.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           felis URRWXCal2]
          Length = 241

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 61/210 (29%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +            +    L  G       +  ++ +G+  G D
Sbjct: 1   MK---FLKIFLLSFLLVSC--------EKKETEKTLIVGTAADNPPYEFIQ-DGEIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      +     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAISERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSVTPERSEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I +   L    + VQ G+  E    D   +  M           
Sbjct: 104 NYATARFAIIYRTGDNIQNSKDLENKIVGVQLGSVLEKKAQDL--SQTMNIKVHSLANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKARVIDAIISEEFQGKKLKENNSN 191


>gi|39937744|ref|NP_950020.1| family 3 extracellular solute-binding protein [Rhodopseudomonas
           palustris CGA009]
 gi|39651604|emb|CAE30126.1| possible ABC transporter, periplasmic amino acid-binding protein
           [Rhodopseudomonas palustris CGA009]
          Length = 251

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 64/218 (29%), Gaps = 16/218 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++         F    A+G+  GF+VD  RAL   I              +    AL S 
Sbjct: 22  IRFLTEIDYPPFNFTGADGNPAGFNVDLARALCDEI---KITCTVQMRKFETLLDALASN 78

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG 153
           + D +  +   T        L F    Y     F+  K           L G  +   AG
Sbjct: 79  RGDAIIASLAVTPQ--TRTKLDFTDPYYRTPARFVARKDAVMPEMRPEFLEGRKVGAVAG 136

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L   F           +   E + AA +    D   GD  +L       D  + 
Sbjct: 137 SAHEAYLKAMF----TDAELHSYPNAEALRAALKRGEVDFIFGDAISLAFWINGTDSENC 192

Query: 214 -----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                   L        +  A+ +G+      ++W  +
Sbjct: 193 CAFSGAPFLESRYFGEGVGIAVRKGNDTLRQALNWALF 230


>gi|330719318|ref|ZP_08313918.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc fallax KCTC 3537]
          Length = 482

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 82/293 (27%), Gaps = 23/293 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K + + I   I        +          +       +     F     N  + G D
Sbjct: 1   MKKIWLICIAIFIATITIVTQSEQVNADK---QPHYVITTDASFPPFDFQDQNNQYVGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  + ++     +        ++       +   Q D +      T  R+      F  
Sbjct: 58  LDILKEIAKR---EGFTYTLKAMSFNSATQLVAGSQADGVIAGMSITDERKEV--FDFST 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y  G  +   K   I S+S+L G ++ ++ GT            +  K     F    
Sbjct: 113 PYYKTGVVWATKKGSNIKSLSELKGQTVALKTGTAGADYAKKIQSQYGFK--VKYFNDSN 170

Query: 181 EIDAAYRAHRCDAYTGDIS-ALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +     +    A   D     YA+K     +      L D         A+ +G+    
Sbjct: 171 IMYNDVVSGNSVATFEDAPVIQYAIKNGLKLKIMNADKLFDAGWS---GFAVKKGEN--- 224

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
                   A     +        +++ K       + F G  K+S+    LGL
Sbjct: 225 ---KALLTAFNQGLKSIQKDGTYDKIVKSYLGKSQEHFTG--KTSDNNSVLGL 272


>gi|116511753|ref|YP_808969.1| amino acid ABC transporter periplasmic protein [Lactococcus lactis
           subsp. cremoris SK11]
 gi|116107407|gb|ABJ72547.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 282

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 66/238 (27%), Gaps = 13/238 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     V+   L ++   +    +S            +    +     F    + G+  G
Sbjct: 1   MRTSLKVTFAALSLIAAGTLVACSSGSKKTSDNKTTSIVIATDGATKPFTYSDSQGNLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D++  RA+   +      +++   +       + S +  + + +  W   R       F
Sbjct: 61  YDIEVARAVFKKL--PQYTVKFQATDFSGIAPGIDSGRYQMGANDFGWEKSRAE--KYYF 116

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      ++ K     +++ L+G S      +    ++ D+ KA+  K   I +  
Sbjct: 117 SSPLSKSNNAVLV-KSGTYKTLADLAGKSTIGNPASNYTKSIQDWNKANPDKQIKISYSA 175

Query: 179 VEEI----DAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                        + + D    D         +   D      I  D           
Sbjct: 176 DSTSINTRFTQVESGKIDFMLYDKISLQSAVKEQGFDNLKIEDISMDTGDAEHDGYEY 233


>gi|45358788|ref|NP_988345.1| amino acid ABC-type transporter-like protein [Methanococcus
           maripaludis S2]
 gi|45047654|emb|CAF30781.1| amino acid ABC-type transporter related protein [Methanococcus
           maripaludis S2]
          Length = 254

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 10/218 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +  KRG L  G+          + NG+  GFD D    ++  +  +     Y   +  E
Sbjct: 27  QNTMKRGTLTVGVCAQYPPTIY-EENGNLAGFDFDLMNEIAKRMNLNTDFKIYN--SKSE 83

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
            F AL+  ++D +  +      R     + F  + Y+D     + +   ++ + +L G +
Sbjct: 84  LFDALEKNEVDCI-GSRTVNYERRKF--VDFTRVYYYDSVRVAVPESSSVTLLKELKGKN 140

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+ +   +  Y      K   + ++  E +  A      DA  G    +Y   ++
Sbjct: 141 LGVIEGSVSSELVESYLTNIGCKC--LYYDTPENLTNAVENGEVDAVIGHE--MYLEHIS 196

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                +   L + +S S  A  I + +    N ++   
Sbjct: 197 TKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDIL 234


>gi|254557738|ref|YP_003064155.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum JDM1]
 gi|254046665|gb|ACT63458.1| amino acid ABC transporter, substrate binding protein
           [Lactobacillus plantarum JDM1]
          Length = 229

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 67/217 (30%), Gaps = 13/217 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +K G L  G+      ++    +G   GF+VD  +A++  +       +++P        
Sbjct: 2   QKSGTLTIGLEGTFQPYSYR-KDGKLTGFEVDLGKAVTKKLGLKA---KFVPTKFDSLIA 57

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            L   + D++  +   T  R       F     +      + K   I+ ++ + G     
Sbjct: 58  GLDVDKYDVVINDIAETAQR--KQKYLFSTPYIYSKSELAVKKGSSINKITDIKGKK--- 112

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            A TTT     D   A  +       +  ++        R         A YA    N +
Sbjct: 113 VAQTTTSNNATD---AKRLGATVTPTDGFQQSIDLVNQGRVAGTINSREAFYAYLKQNPK 169

Query: 211 PS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            S + +     I    +   + +        +S    
Sbjct: 170 ASLKFISGGSEIKTQKIGAIVTKKHASLQKQLSKAIQ 206


>gi|94676736|ref|YP_588772.1| arginine ABC-transporter, arginine binding protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219886|gb|ABF14045.1| arginine ABC-transporter, arginine binding protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 242

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 31/250 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L+ + F SFS + + L  I          N     F  +  N   +GFD
Sbjct: 1   MNKLMII----LLSVIFISFSNDVNTLHFI---------TNANYAPFEFISTNNQIQGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   +        +   + +    +L  K+ D +    D T +R     + F  
Sbjct: 48  IDIANALCKNMHK---ICTFTNQSFESLIPSLNYKRCDAVIAGIDITPVR--MNEVIFTN 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y +   FI  K K     + +    I    G+T +  L D + +       + ++   
Sbjct: 103 SYYTNNAIFITKKDKLFLVKNNMI-HKIGTLNGSTYQKYLVDKYPS----IKIVAYDSYH 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235
                 ++ R D+  GD + +        + +  + + + I+           AI + + 
Sbjct: 158 NAILDLKSERLDSIFGDAAVINQW---LKKDNSLITVGNKITDKSYFGLGFGIAIRKDNN 214

Query: 236 EWYNIVSWTH 245
                ++   
Sbjct: 215 ILLANLNHAL 224


>gi|86138600|ref|ZP_01057173.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseobacter sp. MED193]
 gi|85824660|gb|EAQ44862.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseobacter sp. MED193]
          Length = 236

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 62/221 (28%), Gaps = 18/221 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +  NG+  GF+ +    L           +++  +       L S
Sbjct: 22  TVRLGTEGAYPPYNFLNDNGEVDGFERELGDELCKRA---ELTCEWVTNDWDSIIPNLVS 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  RE    + F                  +S+   L+G  I  Q  T
Sbjct: 79  GNYDAIIAGMSITEEREEV--VDFTQGYTPPSPS----AYAALSADVDLTGGVIAAQTAT 132

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + D           + +   +E  AA RA   DA   D      L+   +     
Sbjct: 133 IQANHVVD------TGATLVEYPTPDETLAAVRAGEADAVIADKD---YLEPEVEASDLI 183

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +  D+     +  A  + D E          +M     L 
Sbjct: 184 FVGDDVPLGGGIGMAFRESDDEMRAKFDAAITSMKEDGSLN 224


>gi|111020458|ref|YP_703430.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110819988|gb|ABG95272.1| probable ABC amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 603

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 75/228 (32%), Gaps = 12/228 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +AS L  I   G L  G  +       V +   + G+D +  +A++  +     ++ ++ 
Sbjct: 81  DASKLNLI-TPGVLTVGTLSDAPPSICVNSENQFTGYDNELLKAVADKLG---LRVDFVG 136

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    +  ++ D+   ++  T   E    + F     F     ++     I     
Sbjct: 137 TEFAGLLAQVAGRRFDV--GSSSITTTDERRNTVGFTNGYDFGYFSLVVPNGGPIQGFDD 194

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+  +       T    + D +  + +K +P+ F       A  ++ + DA+        
Sbjct: 195 LTETTRIGVVQGT----VQDDYVVNTLKLNPVKFPDYATAYANLKSGQIDAWVAPSQQAE 250

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                       ++       + +  A+ + +    + ++    A++ 
Sbjct: 251 G--AIAPGDPTSIVENTFSVNNFVGWAVNKENQPLIDALNSGLDAVIA 296


>gi|324989902|gb|EGC21844.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 521

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 64/231 (27%), Gaps = 21/231 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIF 72
             +  I+   +L+ G+      F       +NG  K         G+DV   + ++  + 
Sbjct: 17  GTVHVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVKIEGTNQYANGYDVQIAKKIAQEMG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            +P  ++    +      AL S +ID++      T  R+  +   F    Y      ++ 
Sbjct: 77  KEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTAERKKEIA--FSNSYYTSEPVLLVR 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K    +S   L          +   + L +                  ++  A  +   D
Sbjct: 132 KDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLPGAKKETAMGDFAQMRQALESGVID 190

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNI 240
            Y  +       +  N                    +A  + + D      
Sbjct: 191 GYISERPEALTAETANSNFKMIQFEKGFEVGEEDASIAIGMRKDDDRIKQA 241


>gi|197295140|ref|YP_002153681.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|195944619|emb|CAR57223.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 306

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 14/183 (7%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +   L  GI   L   +          GFD D  + ++ ++      ++ +PL   +  L
Sbjct: 55  EANTLTIGIAPNLPPLSTYATDARTVVGFDPDLAQLIADSLGRK---LKIVPLAWADWPL 111

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGAS 147
           ALQS ++D +  N   T  R+      F      D  GF +        I     ++G  
Sbjct: 112 ALQSGKVDAVISNVTVTEQRKE--KFDFS-TYRKDQLGFYVKTGSRLAAIREPKDVAGLR 168

Query: 148 ICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +   +GT  E  L ++ + +            +    E   A ++ R D      S L  
Sbjct: 169 VVTDSGTNQEKILLEWNRQNVARGLAPVEIQYYADAAERWVALQSGRVDTIFSVNSMLAY 228

Query: 204 LKL 206
              
Sbjct: 229 QAS 231


>gi|157803337|ref|YP_001491886.1| dihydrodipicolinate reductase [Rickettsia canadensis str. McKiel]
 gi|157784600|gb|ABV73101.1| dihydrodipicolinate reductase [Rickettsia canadensis str. McKiel]
          Length = 241

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 59/210 (28%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +            +    L  G       +  ++  G   G D
Sbjct: 1   MK---FLKIFLLSFLLVSC--------EKKETEKTLIVGTAADNPPYEFIQG-GKIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+   +      +     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAIGERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSVTPERAEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I S  +L    + VQ G+  E    D   +  M           
Sbjct: 104 NYATARFAIIYRTGDNIQSSKELENKIVGVQLGSVLEKKAQDL--SQTMNIKVHSLANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKARVIDAIISEEFQGIKLKENNPN 191


>gi|283456107|ref|YP_003360671.1| putative solute binding protein of ABC transporter [Bifidobacterium
           dentium Bd1]
 gi|283102741|gb|ADB09847.1| Predicted solute binding protein of ABC transporter system
           [Bifidobacterium dentium Bd1]
          Length = 261

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 81/237 (34%), Gaps = 11/237 (4%)

Query: 17  FTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
            ++  T+ S++ + + +G  +  G+ T   G   +    D+ GFD+   R ++  +    
Sbjct: 1   MSACGTSISVVTNGQAQGPTITIGVATDQPGLGLLHGK-DYSGFDITVARYVAQYLGFAD 59

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            ++ +  +    R  AL S  +D++  +       +    + F        +  ++    
Sbjct: 60  KQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHD--DEVTFAGPYLTVRRDLLIRADD 117

Query: 136 G--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I SV  L G ++C   G+ +        +    K      +   +   A      DA
Sbjct: 118 KDGILSVDDLDGKTVCTAKGSISGS----DMRNLTDKMTVEERDTYPQCVTALMIGEADA 173

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D + L  L           ++ +   +     A+  G +E    +     AMV 
Sbjct: 174 IISDDAILTGLAADRGGGY-LKVVGEPFGEQSYGIAVRNGKSELVGQIDAALKAMVA 229


>gi|241764935|ref|ZP_04762935.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
 gi|241365497|gb|EER60262.1| extracellular solute-binding protein family 3 [Acidovorax
           delafieldii 2AN]
          Length = 270

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 73/235 (31%), Gaps = 14/235 (5%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSA 70
           L+     +      +   ++ RG ++  I       +     +G   G D+D   AL++ 
Sbjct: 19  LVAALGCAGVCAGEVQDRVQARGEVRVCIRPNYHRISFRDPRSGQLSGLDIDLASALAAD 78

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +    +K++++  +       L+S + D+          R     + F           +
Sbjct: 79  L---RAKLRFVDSSFATLEQDLRSDRCDVAMFGIPVLPQR--MEQIQFATPYLQSDIYAV 133

Query: 131 MHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
             +   +          G  + VQ G+  E  L    +        +        +    
Sbjct: 134 TTRTSRVVRQWRDIDQPGVLVGVQEGSLLEPLLRQRLRNAG----LVSIAPPHTRERELI 189

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           A R D +  D      L  T    +  ++ P+       A A   GD EW   ++
Sbjct: 190 AGRVDVFMADYPYGRTLIET-TDWAALLVPPEPFHVLTYAHATKPGDAEWMASLN 243


>gi|325848662|ref|ZP_08170240.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480664|gb|EGC83724.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 529

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 64/225 (28%), Gaps = 30/225 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  ++   FT   ++A            K G+      F             
Sbjct: 10  MKKLLKFLMAFVLAFVFTMEISHAD-------EDTFKVGMEVNYAPFNFSQVDDSNGAVE 62

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              + G++  G+DV   + ++  +      ++           AL S +ID +      T
Sbjct: 63  IKNSKGEYANGYDVQIAKKIADRLGKK---LEIYKTEWDGLPPALTSGKIDAIIAGMSPT 119

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC--VQAGTTTELTLADYFK 165
             R+    + F    Y      ++ K    +    L             T   T+ D   
Sbjct: 120 AERKK--EIDFTNSYYVSDLVVVLKKDSPFAKAKSLKDFKDAKLTGQLNTFHYTVLDQID 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             N +      E    + +A ++   D Y  +     +    N+ 
Sbjct: 178 GLNKQS---AMESFPSMISATKSGNIDGYVSEKPGAMSAVSANND 219


>gi|298290581|ref|YP_003692520.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296927092|gb|ADH87901.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 305

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 18/218 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++         F+    +G   GF+VD  RA+ + +     +     +       AL++ 
Sbjct: 76  IRFVTTDDYPPFSFRGEDGRPIGFNVDVARAICTEL---AIRCTLEVMPFDALVEALETG 132

Query: 96  QIDILSRNTDWTL-LREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
           + D        T   RE    L F    +     F+  +    +  +   L+  S+ V A
Sbjct: 133 KADAAIAGLAITPASREK---LDFTDRYFRSPARFVARRGDAATQVTPYVLASKSVGVVA 189

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T+ E  L D+F           +   E + AA +    D   GD   L          +
Sbjct: 190 DTSHEAYLRDFFGE----IAIKPYADSETVRAALQKGDVDLIFGDGVQLGLWLNGTASNN 245

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                       +     +  A+ +G+      +++  
Sbjct: 246 CCAFVGGPFTESLYFGEGMGIAVKRGNEALRQSLNYAL 283


>gi|13474691|ref|NP_106260.1| ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
 gi|14025446|dbj|BAB52046.1| ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
          Length = 253

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 61/199 (30%), Gaps = 10/199 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+    T    F  +   G   GF +D  RA+ + +     K Q   L   E   AL+  
Sbjct: 22  LRFLTTTDFPPFNFLDGTGKLSGFHIDLARAICAELGI-ADKCQIQALPWGELEGALEKG 80

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAG 153
           + + +      T         AF          FI  K K  +      L    + V AG
Sbjct: 81  EGEAIIAGIAATPQ--SRQTYAFSRSYLQFPARFITPKNKAFAEPIFDKLRSKRVGVLAG 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L DYF         + F+  E + +  +A + DA  GD          +D    
Sbjct: 139 SAHERMLRDYF----NTVQIVSFDGPETLYSDLKAGKIDAAFGDGMRFAFWLGGSDAAGC 194

Query: 214 HVILPDIISK-SPLAPAII 231
                        L   + 
Sbjct: 195 CRFAGGPYLAPEYLGTGMA 213


>gi|319946405|ref|ZP_08020642.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus australis ATCC 700641]
 gi|319747373|gb|EFV99629.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus australis ATCC 700641]
          Length = 275

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 80/250 (32%), Gaps = 13/250 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M  + F+  + L ++   +     + ++        +  ++         F     +G+ 
Sbjct: 1   MKLNKFIKYVALSLVGLAAVGTLVACSSKSSSKSSGKRTIEVATVGTTKPFTY-DKDGEL 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G++++  R +      D  ++ +        F  L   +  I   N  +   R      
Sbjct: 60  TGYEIEVMREIFK--GSDKYEVNFNKTEWSSIFAGLDGDRYQIGVSNLSYDKKRAE--KY 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            +      +    ++ K  GI S+  + G S  V  GT+T   L  Y K H      + +
Sbjct: 116 LYPNPYAKNPVVLVVRKDSGIKSLDDIGGKSTEVIQGTSTAKQLEAYNKEHKDNPTELKY 175

Query: 177 E--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQG 233
               ++ I +     R D    +        + +       ++     + P     + +G
Sbjct: 176 TEGTIQSILSNLSDGRSDYKIFER-LTVEAIIKDQGLDNLEVIELPSDQQPYVYPILAKG 234

Query: 234 DTEWYNIVSW 243
           + E    V+ 
Sbjct: 235 EKELETFVNK 244


>gi|319796050|ref|YP_004157690.1| arogenate dehydratase [Variovorax paradoxus EPS]
 gi|315598513|gb|ADU39579.1| Arogenate dehydratase [Variovorax paradoxus EPS]
          Length = 267

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 70/265 (26%), Gaps = 21/265 (7%)

Query: 7   VSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           ++ +       +  +          S L  ++K   L+         F+  K +  ++G 
Sbjct: 10  LTFIAAAAAVLSGCAMAPAATPAATSHLDAVQKAAVLRICTPGDYKPFSFQKTDASFEGI 69

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD     S+++   P    ++          L + + DI       T   +      F 
Sbjct: 70  DVDLMTGFSASLGAKPE---WVKTTWANLLPDLAAGKCDIAVGGVSVTT--DRQKRAFFS 124

Query: 120 PITYFDGQGFIMHKKKGISS----VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                +G+  I                     +    G + E      FK         +
Sbjct: 125 TPYMVNGKTPIARCADVAKYQSVAAIDQPSTRVIFNPGGSNERFARANFKQA----RLTL 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                 I     A+R D +  +  A    +         V     +    +A  + + D 
Sbjct: 181 HGENVTIFDEILANRADVFVTEA-AEAITQQKLKPGLCAVNPDKPLQYGEMAWMLPRDDV 239

Query: 236 EWYNIVSWTHYAMVTAEELGITQKN 260
            + + V    +      +   T   
Sbjct: 240 AFKSYVDQWLHLQQAGGDFQRTMDR 264


>gi|295092286|emb|CBK78393.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Clostridium cf.
           saccharolyticum K10]
          Length = 312

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/241 (10%), Positives = 76/241 (31%), Gaps = 17/241 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSAIFDDP 75
           + + +   L  IK+ G +    +     F          ++ G D++  + ++  +  + 
Sbjct: 57  ADAASEGRLAKIKESGKIVMATSPDFAPFEFKDISSGKMEYVGCDIELGKYIAEKLGVE- 115

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG------F 129
             ++   ++      A+ S  +D+      +T  R  S+GL+ +       Q        
Sbjct: 116 --LEIQAMDFAAVQAAVTSGSVDMAISGFSYTEDRAQSMGLSNKYDYDRGEQPSTQGILI 173

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +      +++    +G  +  Q G   +  + +      M+        V +     +  
Sbjct: 174 LAEDADTLNTAESFAGKKVAAQNGALQQSLVQEQLPDAQME----TITNVNDGVMMLQTD 229

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           + DA     S    +              +      +  A+ +G+     +++     ++
Sbjct: 230 KVDAVAVATSVGETMIANYPELQFSDFWFETDDDGNV-IAVPKGEEALLEVINEAVDEVM 288

Query: 250 T 250
            
Sbjct: 289 E 289


>gi|271963834|ref|YP_003338030.1| amino acid ABC transporter/signal transduction systems periplasmic
           component-like protein [Streptosporangium roseum DSM
           43021]
 gi|270507009|gb|ACZ85287.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component/domain-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 370

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 17/224 (7%)

Query: 33  RGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQY--LPLNAKER 88
           +  L+ G+ T   G A  +  G   +KGFD+     +++ +   P K+ +  +    + R
Sbjct: 93  KDRLRIGVKTDTPGIAFQEQTGRRAFKGFDIQVAYLIAADLGYRPDKVDFLGIETEDRAR 152

Query: 89  FLALQSK----QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQ 142
             AL +      +D++      T  R+    + F     +  Q  +        I+S+ Q
Sbjct: 153 MQALDANGRFVGVDLVVATFSVTRARQEDPSVGFSTPYLYTEQSVVTRSDYPGKITSLGQ 212

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  +C    +T+E  LA   +A     + I      +     +    DA T D + L 
Sbjct: 213 LEGKKVCTLGTSTSETELARATRATVTAKNLI-----SDCATGLKDGDFDAMTTDAAILA 267

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                +     H  +   + K+ +       +     +V    Y
Sbjct: 268 GFVAESGGAFRHHDI--ALEKTEMWAVNAGSNEALRTLVDLALY 309


>gi|323465674|gb|ADX69361.1| Amino acid ABC transporter permease protein [Lactobacillus
           helveticus H10]
          Length = 562

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 84/295 (28%), Gaps = 30/295 (10%)

Query: 4   DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGD------- 55
            +  ++L ++I  F  FS N+       K    LK G+      +   +           
Sbjct: 31  RWIAALLTILISLFIGFSFNSRETQAAKKDSSVLKIGMEANYPPYNWTQPKNTNGAVPID 90

Query: 56  -----WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
                  G+DV   + +   +      +            AL S +ID++      T  R
Sbjct: 91  GSNSYANGYDVQIAKIIGKRLHKK---VVVEKTQWDGLLPALTSGKIDLIIAGMSPTAER 147

Query: 111 EISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
                + F           I +   K      +S   GA +  Q GT     +     A 
Sbjct: 148 RK--AINFSEPYRKSTFVVITNKASKYSNAKKLSDFKGAKLTAQQGTLHYDLIKQLKGAK 205

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIIS 222
                         +  +  +   D Y  +     +    N        ++         
Sbjct: 206 REP----AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMAGFKVDHD 261

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
            S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 262 DSVTSIGVKKGNTKLLNEVNATLRTISNKKREQLMSQAIREQPKAGNETKKENWL 316


>gi|291557112|emb|CBL34229.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a]
          Length = 276

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 84/260 (32%), Gaps = 19/260 (7%)

Query: 1   MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRG--------FLKCGINTGLVGFAEVK 51
           M +  F ++  +      T+  +   IL     +G         +  G +     +    
Sbjct: 1   MKRFDFKALAKIFAKCTATAVLSAVFILSGCSDKGAVSSNALPVIIIG-SDEYEPYNFSD 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG+  G DV+     S A      K Q+  +   E+   L   ++D L          +
Sbjct: 60  KNGNPAGIDVEIA---SEAFLRMGYKAQFKNIVWDEKDEMLADGKVDCLWGCFSMNGRED 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 +        Q   +     I ++S LSG  + VQ+ +  E  L+          
Sbjct: 117 KYR---WVGPYMNSRQAVAVRADSNIYALSDLSGKRVAVQSSSKPEEMLSQKSDDIPQVS 173

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               F R E I AA R +  DA  G    L      +D    + +L + +  S L  A  
Sbjct: 174 GLYCFVRTEYIFAALRKNYVDAVAGHEYMLRVFINESDNK--YRLLDESLLLSKLGIAFA 231

Query: 232 QGDTE-WYNIVSWTHYAMVT 250
           + +       +  T Y M  
Sbjct: 232 KDNDSALLEKLRATLYDMKN 251


>gi|329923973|ref|ZP_08279277.1| putative cyclohexadienyl dehydratase [Paenibacillus sp. HGF5]
 gi|328940932|gb|EGG37239.1| putative cyclohexadienyl dehydratase [Paenibacillus sp. HGF5]
          Length = 286

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 35/269 (13%)

Query: 2   YKDFFVSILCLIILFFTSFS------------------------TNASILGDIKKRGFLK 37
            K     ++ L ++     +                          AS L +I +RG+++
Sbjct: 6   KKVLIAGVVSLSLVATGFAANEVLTSPEVSAKSASTNAPGQLKKQAASQLDEIIERGYIR 65

Query: 38  CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G+      F  +     +++G+DVD    L   +  +   ++Y+          LQ+ +
Sbjct: 66  VGMTGDYKPFTYLNPATKEYEGYDVDAMEELGKDLGVE---VRYVNTTWSNMMKDLQADK 122

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGT 154
            DI          R+ +  ++   I++          K    +V  ++     I V  G 
Sbjct: 123 FDIAVGGVTRNTARQKTAYVSQGYISFGKAPLIRAEDKDKYLTVEDINKPSVRIGVNPGG 182

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E+ + ++    N      V     +I         D    D +         D     
Sbjct: 183 TNEVFVREHLTKAN----VTVVPNNLDIPHLVADGTYDVMITD-TIEAITYAKADSRLYA 237

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            +     + S     I +GD E+ + +  
Sbjct: 238 ALTDKPFTNSEKGYMIPRGDFEYASYLEM 266


>gi|70728871|ref|YP_258620.1| cyclohexadienyl dehydratase [Pseudomonas fluorescens Pf-5]
 gi|68343170|gb|AAY90776.1| cyclohexadienyl dehydratase, putative [Pseudomonas fluorescens
           Pf-5]
          Length = 262

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 77/245 (31%), Gaps = 16/245 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +     +S L  + +RG L          ++ ++ +G ++G D+    +L+ ++    
Sbjct: 17  ALSFAQEPSSHLDQVIERGHLTVCTTGDYKPYSYLRDDGHYEGIDISLAESLAESLG--- 73

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            +++++    K      QS+Q DI       +L R+     +                 K
Sbjct: 74  VRVKWVNTTWKGLMADFQSQQCDIAVGGISVSLERQKKAFFSQPLGIDGKIPLVRCQDLK 133

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              ++ Q++   + +         +  + +AH  K    +F     I      HR D   
Sbjct: 134 RYQTLEQINQPEVRLIEPPGGTNEI--FARAHLPKASLTLFADNVTIFDQLLTHRADVMI 191

Query: 196 GDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D S     +          P  ++   +       A  + + D  W + V    +    
Sbjct: 192 TDASEARFQQRHKPGLCAVNPERYLQYSEK------AFLLPRDDVAWKSYVDQWLHLSKA 245

Query: 251 AEELG 255
                
Sbjct: 246 TGAYD 250


>gi|331653754|ref|ZP_08354755.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli M718]
 gi|331048603|gb|EGI20679.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding
           protein) [Escherichia coli M718]
          Length = 143

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 14/156 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L   ++  ++ +++ + L +      ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTT 155
             Y      I  K   I      L G  + V  G+T
Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGST 143


>gi|307257420|ref|ZP_07539189.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307261840|ref|ZP_07543504.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306864072|gb|EFM95986.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306868457|gb|EFN00270.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 244

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L   +      F      G+  GFDVD   A+   I    +   +          A
Sbjct: 23  QAKDLTFAMEPSYPPFELTNEKGEIIGFDVDIANAICKEI---QANCSFKSQAFDGLIQA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           ++ K+ID      D T  R   +   F    Y     FI  K K   + +     ++ VQ
Sbjct: 80  VKQKRIDGAISAIDITEARAKQVA--FTDAYYDSSASFIAVKGKADLNTA----KNVGVQ 133

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +  +    K    +Y P  +  +++     +  R D   GD + L  +       
Sbjct: 134 NGTTFQQYVVAEAK----QYAPKSYASLQDAVLDLKNGRIDIIFGDTAVLADMLSKEAEL 189

Query: 212 SEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +       + L  A+ + + E    ++    A+    E  
Sbjct: 190 SFVGDKVTNKKYFGNGLGIAVNKSNGELVAELNKGLAAIKANGEYQ 235


>gi|163739647|ref|ZP_02147056.1| extracellular solute-binding protein, family 3 [Phaeobacter
           gallaeciensis BS107]
 gi|163741364|ref|ZP_02148755.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161385098|gb|EDQ09476.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161387106|gb|EDQ11466.1| extracellular solute-binding protein, family 3 [Phaeobacter
           gallaeciensis BS107]
          Length = 236

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 70/255 (27%), Gaps = 31/255 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       IL    L  T+    A           ++ G       +  +  +G   GF+
Sbjct: 1   MK----SLILGTAALALTAGIAMADT---------VRLGTEGAYPPYNFLNDDGQVDGFE 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L      D    +++  +       L S   D +      T  R+    + F  
Sbjct: 48  RELGDELCKRAELD---CEWVTNDWDSIIPNLLSGNYDTIIAGMSITAERKEV--VNFTT 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                           +S+   ++ A +  QA T     +A      +     + F   +
Sbjct: 103 GYTRPSPS----AYAAMSADVDVNSAVVAAQASTIQAAHVA------STGATLVEFPTPD 152

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA +A   DA   D      L           +  D++    +  A  + D E    
Sbjct: 153 ETVAAVKAGEVDAVMADKD---FLIPIVGETEMEFVADDVLLGDGIGMAFRKSDDELRGK 209

Query: 241 VSWTHYAMVTAEELG 255
                 +M     L 
Sbjct: 210 FDVAIESMKADGSLN 224


>gi|315604138|ref|ZP_07879204.1| serine/threonine-protein kinase PknD [Actinomyces sp. oral taxon
           180 str. F0310]
 gi|315313844|gb|EFU61895.1| serine/threonine-protein kinase PknD [Actinomyces sp. oral taxon
           180 str. F0310]
          Length = 338

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 79/229 (34%), Gaps = 12/229 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  +IK RG L+ G +TG      + ++G    G+D+D  RAL+  +    +     
Sbjct: 85  AALVPEEIKARGTLRNGASTGYAPAEYMASDGQTPIGYDIDINRALAKVMGL--TDATTK 142

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                    AL + + D+   +   T  RE  + +    +      G      KG    S
Sbjct: 143 HAEFPTIIPALGT-KFDVGLSSFTITAEREQQVNMV-SYLNVGSAWGVAAGNPKG-FDPS 199

Query: 142 QLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
              GA+I VQ GT  E   A    +   +   +   +  E   +I       + DA   D
Sbjct: 200 NPCGATIAVQTGTAQETYAATLSQECTASGKAQITIMPHELQTDIATKLIGGQYDATLAD 259

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + +           +   L D    +P   A+ + D +    +     
Sbjct: 260 STVI--GYTGAQSAGKIEQLGDTFKSAPQGVAVSKDDEKLTTAIQAALQ 306


>gi|320011630|gb|ADW06480.1| extracellular solute-binding protein family 3 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 324

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 14/198 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTG-LVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +   +++RG L+ G +             +    G ++D    ++  +   P   
Sbjct: 59  AIAAQVPAAVRERGTLRLGASADASPPLGFYATDDRTRIGSEIDLATLIADTLGLKP--- 115

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136
           ++  ++ +  F+ L S + D +  N   T  R+      F      D   F   K     
Sbjct: 116 RFEQVSWENLFVGLDSSKFDGVLSNVTVTEERKE--KYDFA-TYRLDNIAFEARKGSGWK 172

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCD 192
           +   + ++G +I V +GT  E  L D+ + +            F++  +   A ++ R D
Sbjct: 173 VEGPADVAGKTISVASGTNQEKILVDWSEENVEAGREPVDIKYFQKDTDYYLALQSGRID 232

Query: 193 AYTGDISALYALKLTNDR 210
           AY G   +      +  +
Sbjct: 233 AYLGPSPSANYHVASAGQ 250


>gi|172036285|ref|YP_001802786.1| solute-binding family protein 3 precursor [Cyanothece sp. ATCC
           51142]
 gi|171697739|gb|ACB50720.1| putative extracellular solute-binding protein, family 3 precursor
           [Cyanothece sp. ATCC 51142]
          Length = 301

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 86/259 (33%), Gaps = 12/259 (4%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K  F +SI+ L + F     ++A    +L  I K G L+ GI    V F     NG+ 
Sbjct: 1   MKKLVFYLSIINLFLFFIYGSLSHAQELTVLEKIDKTGLLEVGIREDAVPFGYRDINGNL 60

Query: 57  KGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G  +DF       L   +      I+        RF     + +D+         + E 
Sbjct: 61  EGLCLDFIAILREKLKQKLNKKVIAIKLYKSTLYNRFELASDRIVDLECGPNTIREVPEY 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +  +             + + K I+    L    I V   TT E  +A+ +   N+   
Sbjct: 121 QVQFSQPFFLTGTQLLVSIDQAKTINPDGSLENVDIGVLRNTTNEQLIAEKYPLANL-VK 179

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYA--LKLTNDRPSEHVILPD-IISKSPLAPA 229
                       A R  + DA+  D   L    L        ++ ++P   I        
Sbjct: 180 FEGVTGRSRGIQALRGDKIDAFASDGILLVGEALIQNLRLGVDYSLVPTNPIDCEEYGLI 239

Query: 230 IIQGDTEWYNIVSWTHYAM 248
           +   + EW + ++    A 
Sbjct: 240 LPDNNPEWLSFINSVIQAP 258


>gi|66392708|emb|CAG29813.1| hypothetical protein [Rhodococcus erythropolis]
          Length = 320

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 12/227 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + S L  IK  G +  G          V +   + G+D +  +A++  +     K++++ 
Sbjct: 81  DTSKLNLIK-PGVITVGTLGDAPPSICVNSENQYTGYDNELLKAVADKLG---LKVEFVG 136

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    +  ++ D+   ++  T   +    + F     F     ++     I+    
Sbjct: 137 TEFAGLLAQVAGRRFDV--GSSSITTTDDRRNTVGFTNGYDFGYFSLVVPNGSAITGFGD 194

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L  +        T    + D +  + +K  P+ F       A  ++ + DA+        
Sbjct: 195 LDASKRIGVVQGT----VQDDYVVNTLKLDPVKFPDYATAYANLKSGQIDAWVAPSQQAE 250

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                       +I       + +  A+ + +    + ++    A++
Sbjct: 251 G--AIAPGDPTSIIQNTFSVNNFVGWAVNKENQPLIDALNSGLDAVI 295


>gi|315655158|ref|ZP_07908059.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii ATCC 51333]
 gi|315490413|gb|EFU80037.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii ATCC 51333]
          Length = 298

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 72/230 (31%), Gaps = 17/230 (7%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           R  L+  ++        +  N    G++VD  +ALS  +     KI     +       +
Sbjct: 56  RETLRVAMDIPYSPAMFLDDNNQPTGYEVDVLKALSRLMGVSDLKIS--DEDFDAIIPKV 113

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASIC 149
                D+   +      R          +  +   GFI   + G           G  + 
Sbjct: 114 NDGTYDLGMASITIKKSRMAQ-----VNMISYIQAGFIYGTQGGNPKNFDPANPCGLKVA 168

Query: 150 VQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ T+ E TL D      KA       +  +  E++     A   DA  G+   +   +
Sbjct: 169 AKSETSQENTLQDVSASCLKAGKPAIQIVSSDNQEDLIQQVAAGTLDAVIGESPIMAYAE 228

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             N +      + +    +P  PAI + + E    V      M+    L 
Sbjct: 229 SRNPK---FATVGEAFHVAPQGPAIAKDNPELAKAVQAGLQKMIDTGLLN 275


>gi|297203992|ref|ZP_06921389.1| ABC transporter substrate-binding protein [Streptomyces sviceus
           ATCC 29083]
 gi|197713189|gb|EDY57223.1| ABC transporter substrate-binding protein [Streptomyces sviceus
           ATCC 29083]
          Length = 340

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 16/187 (8%)

Query: 23  NASILGDIKKRGFLKCG---INTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           +A +   +KK G L  G   + +G      V ++     G +VD  R ++S +   P   
Sbjct: 71  SAELPDAVKKSGKLVIGSGTLPSGSPPLGFVGSDQKTLTGSEVDLARLVASVLGLQPEVK 130

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           ++     +  F+ + S ++++   N   T  R       F      D   F   K    +
Sbjct: 131 RF---TWENLFVGIDSGKVNVGFSNITDTEER--KQKYEFA-SYRKDDLAFETLKTSKWT 184

Query: 139 SVSQ---LSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                  L+G ++ V AGT  E  L ++    K    K     F+    +  A  + + D
Sbjct: 185 FDGDYEALAGRTVSVSAGTNQERILLEWQTKLKKEGKKLTIKYFQDSPSVYLALASGKID 244

Query: 193 AYTGDIS 199
           AY G   
Sbjct: 245 AYLGPSP 251


>gi|126699790|ref|YP_001088687.1| amino-acid ABC transporter substrate-binding protein [Clostridium
           difficile 630]
 gi|255101312|ref|ZP_05330289.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile QCD-63q42]
 gi|255307188|ref|ZP_05351359.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
           difficile ATCC 43255]
 gi|115251227|emb|CAJ69058.1| ABC-type transport system,cystine/aminoacid-family extracellular
           solute-binding protein [Clostridium difficile]
          Length = 265

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 93/288 (32%), Gaps = 27/288 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            ++    ++ ++ L F     +     ++K    +    +     ++ V  NG+ KGF+V
Sbjct: 3   KRNIIKCLVAVLSLTFVITGCSKK--EEVKNEKVITVASSNSADPYSYVD-NGEHKGFEV 59

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D  + +          I+  P      F  L S ++D+ +        +E          
Sbjct: 60  DMWKEIGKRSGYK---IKMEPTGFSSIFGMLDSGKVDVAANFFGM--SKERLEKYDASIP 114

Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              D     +      I+ +  L G  + V  G+  +       K +  +     +    
Sbjct: 115 YGSDSVCIAVKDGNNEINKLEDLKGKVVAVSEGSQGQQVATSVNKDNLFQEKV--YGDGT 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                    R  A+      +       +   +  +L   +S + +A    + D +   I
Sbjct: 173 SGLQDLDLGRVSAWIDAELTIVGDAKKAN--MKVRVLDKKLSATNIAYFFKKNDDKSKTI 230

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSNIGE 287
               + A             I ++  D T   + +++ G+D S++I +
Sbjct: 231 KEDVNKA-------------IEEMLADGTVKKISEKWFGMDVSADIQK 265


>gi|107028262|ref|YP_625357.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116686255|ref|YP_839502.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105897426|gb|ABF80384.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116651970|gb|ABK12609.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 313

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 14/183 (7%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +   L  GI   L   +          GFD D  + ++ ++      ++ +PL   +  L
Sbjct: 62  EANTLTIGIAPNLPPLSTYATDARTVVGFDPDLAQLIADSVGRK---LKIVPLAWADWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
           ALQS ++D +  N   T  R+      F      D  GF +    K   I     ++G  
Sbjct: 119 ALQSGKVDAVISNVTVTEQRKE--KFDFS-TYRKDQLGFYVKTGSKLAAIREPKDVAGLR 175

Query: 148 ICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +   +GT  E  L ++ + +            +    E   A ++ R D      S L  
Sbjct: 176 VVTDSGTNQEKILLEWNRQNVARGLAPVEIQYYADAAERWVALQSGRVDTIFSVNSMLAY 235

Query: 204 LKL 206
              
Sbjct: 236 QAS 238


>gi|138895923|ref|YP_001126376.1| ABC transporter [Geobacillus thermodenitrificans NG80-2]
 gi|134267436|gb|ABO67631.1| ABC transporter [Geobacillus thermodenitrificans NG80-2]
          Length = 288

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 83/258 (32%), Gaps = 18/258 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K       F  ++ ++    +  S+    L  +KK+G +  G       +A  + NG+
Sbjct: 1   MKKVILYLGLFALLIGMVGCSSSQTSSFDDTLEALKKKGVVYVG-FANEKPYAY-EENGE 58

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            KG  VD  + +   +     K++       E    L + + D+++        R     
Sbjct: 59  LKGEAVDIAKEIFKQLG--IEKVEGRLAEFNELIPGLNAGKFDVITAGMAILPNR--CEK 114

Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    Y  G   ++ K     + S   ++       A  ++ + +    ++   +   
Sbjct: 115 VDFAEPEYQVGDALVVKKGNPKNLHSYEDIAKLPDVKIAVMSSAMEVDYLKQSGVREEQI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAP 228
           ++   +  +  A +  R DA TG    +     +  +       +          S  A 
Sbjct: 175 VLVPDIPAVIDAVKTGRADAATGTQLTMKEALQSAGQKELELVSDFKQPDVEGIPSYGAA 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
              Q D +     +    
Sbjct: 235 VFRQDDDQLREAYNKELQ 252


>gi|323485960|ref|ZP_08091292.1| hypothetical protein HMPREF9474_03043 [Clostridium symbiosum
           WAL-14163]
 gi|323693046|ref|ZP_08107266.1| hypothetical protein HMPREF9475_02129 [Clostridium symbiosum
           WAL-14673]
 gi|323400722|gb|EGA93088.1| hypothetical protein HMPREF9474_03043 [Clostridium symbiosum
           WAL-14163]
 gi|323502927|gb|EGB18769.1| hypothetical protein HMPREF9475_02129 [Clostridium symbiosum
           WAL-14673]
          Length = 303

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/295 (10%), Positives = 76/295 (25%), Gaps = 55/295 (18%)

Query: 1   MYKDFFVSILCLIILFFTSF-------------------------STNA---------SI 26
           M K   V +   + L   +                          +              
Sbjct: 1   MKKLLAVLLAGTMALSLAACGGGKTTAGTATKAAADTTAAGTENAAAEGKEDAGTELTGR 60

Query: 27  LGDIKKRGFLKCGINTGLVGFAE----VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           L  IK+ G LK   +     +            + G D++  + ++  +      +Q   
Sbjct: 61  LKAIKEAGVLKVATSPDYPPYEFEDITKDGQDKYVGADMELAKYIADKLGVK---LQIEA 117

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF---DGQGFIMHKKKGISS 139
           +       A+   ++D+          R+ ++   F  + Y         +        S
Sbjct: 118 MAFDACMAAIGQGRVDLTICGMVPKEERKTTM--DFSDVYYNDGDQVIVIMKDSADQYKS 175

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           ++  +G SI  Q GT     +         +    V   V +     +  +         
Sbjct: 176 LADFAGQSIAAQNGTLQYDLVTTQIPDAKCE----VVSAVTDGIMMLKTGKVAGIALASV 231

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPA--IIQGDTEWYNIVSWTHYAMVTAE 252
           A            + V        + L     +++ + E+   ++     +V + 
Sbjct: 232 AADNYLANYP---DLVECSQKFDYTSLGVVAGVVKDEPEFLEELNGIIKEVVDSG 283


>gi|170734881|ref|YP_001773995.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169820919|gb|ACA95500.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 313

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 14/183 (7%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +   L  GI   L   +          GFD D  + ++ ++      ++ +PL   +  L
Sbjct: 62  EANTLTIGIAPNLPPLSTYATDARTVVGFDPDLAQLIADSVGRK---LKLVPLAWADWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
           ALQS ++D +  N   T  R+      F      D  GF +    K   I     ++G  
Sbjct: 119 ALQSGKVDAVISNVTVTEQRKE--KFDFS-TYRKDQLGFYVKTGSKLAAIREPKDVAGLR 175

Query: 148 ICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +   +GT  E  L ++ + +            +    E   A ++ R D      S L  
Sbjct: 176 VVTDSGTNQEKILLEWNRQNVARGLAPVEIQYYADAAERWVALQSGRVDTIFSVNSMLAY 235

Query: 204 LKL 206
              
Sbjct: 236 QAS 238


>gi|254454571|ref|ZP_05068008.1| ABC transporter substrate-binding protein [Octadecabacter
           antarcticus 238]
 gi|198268977|gb|EDY93247.1| ABC transporter substrate-binding protein [Octadecabacter
           antarcticus 238]
          Length = 277

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCRALSSAIFDD 74
             T+     S +  +   G L+ G+      +++  A+G+W  G  V    A++  +   
Sbjct: 20  GGTTAQAQDSTMDQVMDNGVLRVGVTQAPPWYSKDIASGEWTGGLGVSMGEAMAETLGVT 79

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++   +       ALQ+ +ID+     D T  R+ ++     P+  +     +    
Sbjct: 80  FEPVE---VTWGTAVAALQANRIDM-MFVLDATDARKEAVNFPETPL-LYYSLAVLARDD 134

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +++   L+   I +        ++  +   +        F    E  AA++A R DA 
Sbjct: 135 LEVTNWEDLNSPDISISVP--QASSMDAFLTENAPNADIQRFPGNAEAIAAFQAGRVDAV 192

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYA 247
           T     L A +         +++P  +   P + A+ Q  DT + + V+     
Sbjct: 193 TLFHPPLIAARQKLGAGQ--IVVPQPVESRPSSVAVRQESDTAFVDWVNEQIDG 244


>gi|167769496|ref|ZP_02441549.1| hypothetical protein ANACOL_00830 [Anaerotruncus colihominis DSM
           17241]
 gi|167668464|gb|EDS12594.1| hypothetical protein ANACOL_00830 [Anaerotruncus colihominis DSM
           17241]
          Length = 271

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 71/259 (27%), Gaps = 27/259 (10%)

Query: 17  FTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             S   +          G       +T    F     +G++ G D+D  +A++       
Sbjct: 31  TASSGASGDASAAGTDAGKTYLIATDTTFAPFEFQNESGEFVGIDMDLLKAIAED---QG 87

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
              +   L       +LQ+ Q D +      T  R       F    +  G    +    
Sbjct: 88  FSYEIQVLGFDAAVQSLQAGQSDAVIAGMSITPER--QDTFDFSEPYFDSGVVMGIKAGN 145

Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I S   L G ++ V+ GT            +        F+    +     +    A 
Sbjct: 146 EEIKSYEDLRGKNVAVKTGTEGSAFAESIKAEYGFTTT--YFKDSSNMYEDVISGNSAAC 203

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             D      L     +     I+ +    S    A+ +G                 AE L
Sbjct: 204 FEDYPV---LGYAVSQDIGLKIVTEKEQGSSYGFAVNKGQ---------------NAELL 245

Query: 255 GITQKNINQVSKDTTNPDV 273
            +  K +  + ++    ++
Sbjct: 246 DMFNKGLANLKENGKYQEI 264


>gi|150399094|ref|YP_001322861.1| extracellular solute-binding protein [Methanococcus vannielii SB]
 gi|150011797|gb|ABR54249.1| extracellular solute-binding protein family 3 [Methanococcus
           vannielii SB]
          Length = 248

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 77/214 (35%), Gaps = 12/214 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K G L  G+   +     +K + +  G++++    ++  +  +   + +     +  F A
Sbjct: 29  KEGTLTVGVYPYMAPMTYMKDD-ELTGYEIEMISEMAKRMDYN---VNFKVYEFERLFSA 84

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L+  +ID        T+ R+      F     +      + K   IS ++ + G  + V 
Sbjct: 85  LEYNEIDCAIAGIGITIDRKT--KFEFSRPYRYTFTVITVLKDSSISKINDIEGQKVGVL 142

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT  E    +  +     +  I +   E + +   + +  A   D+ ++          
Sbjct: 143 KGTLMENKANELRRTR--SFEIIKYSSPEIMYSDLNSKKISAAITDLDSINYNSQN---- 196

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +L + +    +  A+ +G+ E  N ++   
Sbjct: 197 QNIRVLDEHLDIIYMGIALKKGNVELLNNINTVM 230


>gi|27383228|ref|NP_774757.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27356402|dbj|BAC53382.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 284

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 83/228 (36%), Gaps = 13/228 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77
           +   N S    I++   ++ G   G   +     A+G WKGF VD  +AL+  +    ++
Sbjct: 32  AADPNESTFARIRRTKKMRIGAVGGGAPYYMKDLASGQWKGFYVDIAKALADDM---EAE 88

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++          L LQS +IDI           + +L + F    + +  G +  K    
Sbjct: 89  LEITETTWGNSVLDLQSNKIDIFFG---LNPTPKRALVVDFSVPVFNNAFGILCKKDFKP 145

Query: 138 SSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + ++L      I V  G++ +  ++               +  ++  AA +  R DA  
Sbjct: 146 KTWAELNSPDVKIAVDQGSSHDQVVSRLIPKA----QISRLKTADDATAALQTGRVDAQC 201

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                   +   N    + V+   I + +  A    + D  W + V+ 
Sbjct: 202 LITMLSLTVLKKNPSLGQFVLPTPIFATTSNAGFRRETDKTWRDYVNT 249


>gi|330983087|gb|EGH81190.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 192

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 7/140 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  IK+ G +  G     + F+ +  A+G   G+  D    +  AI  D    
Sbjct: 55  AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMP 114

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K++Y  + ++ R   +Q+  +D+   +T     R     + F    +  G   +  K 
Sbjct: 115 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNAER--QQQVDFSIGIFEVGTRLLSKKD 172

Query: 135 KGISSVSQLSGASICVQAGT 154
                   L G ++   AGT
Sbjct: 173 SSYKDFDDLKGKNVVTTAGT 192


>gi|312278332|gb|ADQ62989.1| Amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus thermophilus ND03]
          Length = 265

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 59/241 (24%), Gaps = 14/241 (5%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
           ++  +S S+       I+KRG +K      L        + +  G+DV+  + +   +  
Sbjct: 1   MVACSSQSSADKNWEKIEKRGSIKVATAGTLYPQTYHDDDNNLTGYDVEILKEVGKRL-- 58

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              KI +  +       ++ S Q+D    N                    +        +
Sbjct: 59  -KLKIDFTEMGVDGMLTSVNSGQVD--IANYSLEDENNNIKKFLRSEPYKYSFTSMAARE 115

Query: 134 KKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                ISS   L G        T               +         +         R 
Sbjct: 116 SDNPGISSWEDLKGKKAGGATSTKYMKITKKM----GAELVVYDNVTNDVYMQDLVNGRT 171

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYNIVSWTHYAMV 249
           D    D                 V + D I  +P   +      +      V+     M 
Sbjct: 172 DVIVNDYYLQKMAVAAIKDKYP-VKINDGIYSNPYSTSFTFSSKNKTLQEKVNKAIKDMK 230

Query: 250 T 250
            
Sbjct: 231 E 231


>gi|312879478|ref|ZP_07739278.1| methyl-accepting chemotaxis sensory transducer [Aminomonas
           paucivorans DSM 12260]
 gi|310782769|gb|EFQ23167.1| methyl-accepting chemotaxis sensory transducer [Aminomonas
           paucivorans DSM 12260]
          Length = 528

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 77/228 (33%), Gaps = 19/228 (8%)

Query: 26  ILGDIKKRGFLKCGINTGLVG-FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L D+++RG  + G+    VG F   +  G  +GFD D   AL  A+   P  +    + 
Sbjct: 295 SLEDLRRRGTARIGVEKNDVGVFHFWRG-GRVEGFDADLATALCQAMGVRPELVP---VP 350

Query: 85  AKERFLALQSKQIDILSR------NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
                    +      S        T  T L E    + F    +  GQ  +  ++ GI 
Sbjct: 351 WGNGEPGTVTGTWTAGSFEGFDFLVTTATKLPERIERVTFSDSYFESGQMVVTRRETGIL 410

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            +  L G ++ V  G T E       K        + F    E+  A  +   DA   D 
Sbjct: 411 RLMDLKGRAVGVTRGATNEQAARGKLK----HSQIVSFPSWPEVVRALESGAVDALVIDS 466

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTH 245
               A +L  + P     L  ++++      + +    +   +V    
Sbjct: 467 P--VAWELVKEHPG-FDALEALLTREHFGITLPRDVSWDLKELVDQVV 511


>gi|330895795|gb|EGH28084.1| prephenate dehydratase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 262

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 80/262 (30%), Gaps = 19/262 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M    + ++  L++              L  + + G L          +  ++ + +++G
Sbjct: 1   MMNLKYSALTALLLGITGMAQAQDYTSHLDKVLQTGQLAVCTTGDYKPYTLLREDSEYEG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+   R+L+ ++  +   +Q++P   K     + + + DI       +L R+     + 
Sbjct: 61  IDITMARSLAKSLGVN---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSN 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          +    +V Q++  S+ +           + F   ++    + F  
Sbjct: 118 TLDVDGKIPLVRCADQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQG 233
            + I       + D    D S     +          P+ ++   +       A  + + 
Sbjct: 175 NKTIFQELLDKKADVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRD 228

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D  W   V    +      E  
Sbjct: 229 DVTWKGYVDQWLHLSKATGEYQ 250


>gi|291614777|ref|YP_003524934.1| extracellular solute-binding protein family 3 [Sideroxydans
           lithotrophicus ES-1]
 gi|291584889|gb|ADE12547.1| extracellular solute-binding protein family 3 [Sideroxydans
           lithotrophicus ES-1]
          Length = 266

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 70/244 (28%), Gaps = 16/244 (6%)

Query: 7   VSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
              +  +    +  +     L      I+    ++  I                  G DV
Sbjct: 6   ALAMLFVACTISPHTFAQDTLPGHLDRIRSAKAVRVCIWPDYYSITYRNPKTQQLSGIDV 65

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L   +      ++++  +  +    +   + D+       T  R   L    RP 
Sbjct: 66  DMANELGKDLG---VAVKFVDSSFAKLIDDVTQDRCDVAMFAIGITPSRAEKLRFT-RPH 121

Query: 122 TYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              D         + I +   +   G+ + V  GT  E  + +  KA       IV +  
Sbjct: 122 LASDIYAITTKSNRRIKTWDDIDKPGSVVAVAKGTLHEPVMKEMLKAAK----LIVLDTP 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
              +    + R D +  D              +  V  P     +P A A+  GD  W++
Sbjct: 178 FAREQEVESGRADVFMTDYPYSQRFLANA-DWARLVSPPGTYHVTPYAYAVKPGDDAWFD 236

Query: 240 IVSW 243
            V  
Sbjct: 237 RVDR 240


>gi|254460961|ref|ZP_05074377.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206677550|gb|EDZ42037.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 241

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 54/199 (27%), Gaps = 24/199 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +    ++       ++A           ++ G       +  +   G+  GF+
Sbjct: 1   MKNFILTTTALTLVASMAFADSHAKT---------IRMGTEGAYAPYNFINDAGEVDGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L           +++          L S   D +      T  R+    + F  
Sbjct: 52  RELGDELCVRA---ELTCEWVTNEWDSIIPNLVSGNYDTIIAGMSITDERDEV--IDFTQ 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                           +S    ++G  I  Q GT     +A      +     + F   E
Sbjct: 107 NYTQPDPS----AYLALSMDVDVTGGVIAAQTGTIQASHIA------STGATLVEFATPE 156

Query: 181 EIDAAYRAHRCDAYTGDIS 199
           E  AA R    DA   D +
Sbjct: 157 ETVAAVRNGEADAVLADKT 175


>gi|311898350|dbj|BAJ30758.1| putative ABC transporter substrate-binding protein [Kitasatospora
           setae KM-6054]
          Length = 308

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 21/238 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A +  D+K  G +K G   G    A   +   +  G DVD    +++ +      +Q
Sbjct: 51  AAAALLPDDVKAAGTIKLGGAVGTPPGAYYPEGKKELAGLDVDLVNGVAAVLGVK---VQ 107

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKK 135
                 +    AL S + D+ + N   T  R  +  + F      DGQGF +        
Sbjct: 108 REDAAFETILPALGSGKYDVGTGNFGVTTARLKT--VDFV-TYIDDGQGFAVRSDNTALN 164

Query: 136 GISSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            ++ ++QL G ++   AGTT E TL     D  KA    Y   VF     +    +  R 
Sbjct: 165 NVTDLTQLCGLTVGTGAGTTFEATLNAKKDDCAKAGKKPYDVKVFTENGAVLTGLQQGRL 224

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG---DTEWYNIVSWTHY 246
           D      S +  L+   ++P+  +       +  +  A  +G      +   V+    
Sbjct: 225 DVVM---STINGLRYQANQPTAKIRFLGEFHRLDVGFAFKKGSTLTPAFQAAVNQLIK 279


>gi|222084793|ref|YP_002543322.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221722241|gb|ACM25397.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 291

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 83/264 (31%), Gaps = 28/264 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRG---------FLKCGINTGLVGFA 48
           +    ++L          +  A      +L D ++R           L+   +     F 
Sbjct: 13  RSLTGAVLMAASCAMPVVAQQAPPSGLPVLFDARERLPKPDLSTLVRLRFLTSVDFPPFN 72

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               NG   GF VD  R +   +     K Q   L  +E   AL + Q D +      T 
Sbjct: 73  FADQNGKLSGFHVDLAREICDELGIS-DKCQIQALPFEELQGALSASQGDAVIAGVAVTP 131

Query: 109 LREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
             E+    AF          F+          + + L+G S+ V  GTT E  LA +F A
Sbjct: 132 --ELRKSFAFSRPFLMLPARFVRNLKAPIDGRTAAALAGHSVGVVKGTTHEAMLAAFFPA 189

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDII 221
                  + F+  + + AA +  + DA   D   L     +          +   L    
Sbjct: 190 ----IKLVPFDDKDALLAAVKDGKVDAGFADGLQLSFWVSSPSAEKCCALFDGPYLSQQF 245

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
               +   + + D +    ++   
Sbjct: 246 LGEGMTIMLREQDADLTAAINHAL 269


>gi|148379138|ref|YP_001253679.1| ABC transporter, substrate-binding lipoprotein [Clostridium
           botulinum A str. ATCC 3502]
 gi|148288622|emb|CAL82703.1| ABC transporter, substrate-binding lipoprotein [Clostridium
           botulinum A str. ATCC 3502]
          Length = 279

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 12/251 (4%)

Query: 2   YKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            K F   +   +    T+      ++    + K    +        V  + V  NG  KG
Sbjct: 5   KKAFLFVVFICMTFTMTACGGKNNDSQKKEEAKAPTKIVVASGAASVPNSYV-ENGVHKG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +VD   A+S        K++++       F  L S + D +         R       F
Sbjct: 64  HEVDIWNAISKRTG---IKVEFVTGEFNTLFGYLDSGKADTVGNTITINASR--QDKYNF 118

Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +  +  ++H     I  +  ++G +    AG+          K   +    + ++
Sbjct: 119 SEPYAYIPEKLVVHSNRTDIKKLKDVAGMTCGFIAGSNGGNLFEKMAKEQGIDIKLVTYD 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E ++ A+   + D      SA        +   +  ++ + +     A   ++G++  
Sbjct: 179 SSELLNQAFNQGKVDVMLL--SAAEVAYKIKNGLLDARMVEEDVVVGAKAYPFVKGNSNS 236

Query: 238 YNIVSWTHYAM 248
             +      A+
Sbjct: 237 EQLNKTVTKAI 247


>gi|117164565|emb|CAJ88111.1| putative ABC transporter substrate-binding protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 330

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 65/196 (33%), Gaps = 14/196 (7%)

Query: 23  NASILGDIKKRGFL-KCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQY 80
            A +   I+KRG L     +           +     G + D    ++  +   P   + 
Sbjct: 67  AAEVPERIRKRGTLELVASSGSAAPLTFHATDNKTVIGVEPDLAHLVADVLGLKP---RL 123

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138
             ++ +  F+ L S + D    N   T  R+      F      D  GF   K     ++
Sbjct: 124 HTVSWENIFVGLDSGKYDAGLSNITVTEERKE--KYDFA-TYREDNLGFEAKKGSGLEVA 180

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM----KYHPIVFERVEEIDAAYRAHRCDAY 194
               L+G ++ V +GT  E  L ++ K +            ++   +   A ++ R D Y
Sbjct: 181 GPEDLAGRTVAVSSGTNQEKLLVEWSKENEKAGREPVDIKYYQNDSDTYLALQSGRIDLY 240

Query: 195 TGDISALYALKLTNDR 210
            G          T  +
Sbjct: 241 LGPNPTAAYHAATTGK 256


>gi|114768865|ref|ZP_01446491.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [alpha
           proteobacterium HTCC2255]
 gi|114549782|gb|EAU52663.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [alpha
           proteobacterium HTCC2255]
          Length = 245

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 72/252 (28%), Gaps = 25/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++   LI  F +S   +            ++ G       +  V  +G+  GF+
Sbjct: 1   MTLTKLITGAALIAAFTSSAFADGHT---------IRMGTEGAYPPYNFVNDSGEVDGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L            ++  +       L S   D +      T  R+    + F  
Sbjct: 52  REVGDELCKRA---NLNCTWVINDWDSIIPNLVSGNYDTIIAGMSITSERDEV--IDFTS 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +       +       + + +    +  Q  T     +A      +     + F   E
Sbjct: 107 EYFPPDPSTYVA---LAGASADVVNGVVAAQTSTIQAAYIA------SSSATVVEFATPE 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA R    DA   D  A  A  +         +   +     +   I + DTE    
Sbjct: 158 ETVAAVRNGEADAVLADD-AYLADIVNASNGELAFVGSPVAIGGGIGMGIRESDTELKAT 216

Query: 241 VSWTHYAMVTAE 252
           ++    A + A+
Sbjct: 217 MNTAI-ASMKAD 227


>gi|238798541|ref|ZP_04642019.1| ABC transporter, solute-binding component [Yersinia mollaretii ATCC
           43969]
 gi|238717628|gb|EEQ09466.1| ABC transporter, solute-binding component [Yersinia mollaretii ATCC
           43969]
          Length = 272

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 76/238 (31%), Gaps = 13/238 (5%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +      F++ + +A +L  IK    +          F  V  NG   G+DVD    + S
Sbjct: 1   MLCAASVFSATAHSADLLERIKTDKAITIATEARYAPFESV-ENGKIVGYDVDLMNHILS 59

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
                  K++ L L  +     L +K+ D +         R      AF           
Sbjct: 60  KSL-PGVKVKQLDLPFQGILPGLDAKKFDFVVTAVTVNKQR--MDHFAFTVPIAESTVAL 116

Query: 130 IMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-----IVFERVEEID 183
           +       ISS+  LSG  +  QAG+     L ++ +       P       +   +E  
Sbjct: 117 LKRDNDSSISSLDDLSGKVVGSQAGSGQLQVLQEFNEKLKASGKPGIKEIKQYVSFDEAY 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNI 240
           A     R D     ++ L  L     RP     L P +   +    A  + D     +
Sbjct: 177 ADLANKRLDGVAQSLANLGPLI--KARPGLFTTLKPMLGPTTYFGWAGRKDDDSATLV 232


>gi|154687484|ref|YP_001422645.1| YtmK [Bacillus amyloliquefaciens FZB42]
 gi|154353335|gb|ABS75414.1| YtmK [Bacillus amyloliquefaciens FZB42]
          Length = 270

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 5/203 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     V  L +      S            ++    +  G  T       +   G   G
Sbjct: 1   MKIRLAVMSLTIAATAALSACGAGGEAASGNQKNVKNITVGTGTQFPNICFIDDKGKLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+  + L   +     +  +  ++     ++L   ++DI++   + +  RE       
Sbjct: 61  YDVELVKELDRRL--PDYRFTFKTMDFSNLLVSLGQHKVDIVAHQMEKSAEREKKFLFNQ 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                F  +  ++ +   I  +  L G  +     +   L L  + K H   +      +
Sbjct: 119 VAYNNFPLKITVLQENGNIHGIDDLKGKRVITSPTSNGALVLKKWNKKHGSPFEIAYAGQ 178

Query: 179 -VEEIDAAYRAHRCDAYTGDISA 200
              +     ++ R DA      A
Sbjct: 179 GSNDAANQLKSGRADATISTPFA 201


>gi|239833766|ref|ZP_04682094.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Ochrobactrum intermedium LMG 3301]
 gi|239821829|gb|EEQ93398.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Ochrobactrum intermedium LMG 3301]
          Length = 290

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 82/262 (31%), Gaps = 12/262 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      ++   + +   +  + A  + D+K  GF++ G     V +  +  +G  KG  
Sbjct: 6   MKHLTISALFSAVAVLSLTLPSQAVTIEDLKGAGFVR-GATANEVPYGYMDESGAAKGIG 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   A+   +  +   I +           L++K+ + ++      +L +    + F  
Sbjct: 65  PDVAAAIFKKLGIEE--IDWTVTPFGSLIPGLKAKRFEFVAAE--QNVLPDRCKQVQFTV 120

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                G+G ++ K     I S   +        A  +    +         +   ++ + 
Sbjct: 121 ANSSYGEGLLVPKGNPKNIHSYEDIKKDPSLKVAIVSGADQIDFLHGMGIDESQIVMIQG 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233
             +  +  +  R DAY      +  L   +    +     D +          A +    
Sbjct: 181 NADAPSTVQTGRADAYAATELTVAKLVDNSPELEQAHPFTDPVVNGKSARSFGAFSFRPE 240

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E+Y   +         ++  
Sbjct: 241 DKEFYEAFNKALIEFKKTDDYK 262


>gi|195970203|ref|NP_384630.2| putative amino acid-binding periplasmic protein [Sinorhizobium
           meliloti 1021]
 gi|187904140|emb|CAC45096.2| Putative amino acid-binding periplasmic protein precursor
           [Sinorhizobium meliloti 1021]
          Length = 307

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 71/259 (27%), Gaps = 19/259 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKR---------GFLKCGINTGLVGFAEVKANG 54
             FV    L      +       L D ++R           L+         F  +  +G
Sbjct: 35  WIFVLSAVLAPGLALAQPKELPRLFDARERIAKPDLSGLARLRFLTTVDFPPFNFIDQSG 94

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF VD  R +   +  +  K Q   +   E   AL+  Q + ++     T       
Sbjct: 95  KLSGFHVDLAREICRELEIEA-KCQIQAVTYPELMPALEQGQGEAIAAGIAVTSELRQRF 153

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +   +               I+  + L+G  + V +GTT E  L  +F          
Sbjct: 154 AFSRAFMQLPARFVVNTKAAGAIAGPADLAGKPVGVVSGTTHEAMLKAFFPK----LEAK 209

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPA 229
            F   + + +A R     A   D   L      N       +L             L   
Sbjct: 210 GFPDRDALLSALRGGTVAAAFSDGMQLSFWVSGNLAGGCCAMLEGSYFSQRFLGEGLTIM 269

Query: 230 IIQGDTEWYNIVSWTHYAM 248
             + +      +     A+
Sbjct: 270 NRKAEPALTQAIDHALLAL 288


>gi|119489264|ref|ZP_01622071.1| hypothetical protein L8106_07411 [Lyngbya sp. PCC 8106]
 gi|119454738|gb|EAW35883.1| hypothetical protein L8106_07411 [Lyngbya sp. PCC 8106]
          Length = 839

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 14/242 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSK 77
               +IL +IK+ G LK  +      F  +    +W G+  DF    ++ +    D   K
Sbjct: 580 PAGETILEEIKRTGVLKAAMRRDAAPFGYIDNKQNWTGYCSDFLNDFANHLTEKLDTAIK 639

Query: 78  IQYLPLNAK--ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HK 133
           +Q +   +    RF  +++K + +          R     +AF    +  G  F++    
Sbjct: 640 VQLVRFPSNLDNRFQLVRNKTVHLECGPNTI---RNNIPDVAFSQPFFVTGTQFLIQTKN 696

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           +  I   + L+     V   +T E  +   +       +      + +   A   ++ D 
Sbjct: 697 EDQIQPNTSLNDIKTGVVRNSTNEQFIRQQYPQAQ-TIYFRGENAISDAVKAVTNNQIDT 755

Query: 194 YTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           +  D             P E+  L     ++      A+   DT W  +V+    +   A
Sbjct: 756 FANDGILTLGELFRQQVPIENYTLVPEKPLTCDFYGVALPNNDTRWRRMVNSFIDSQ-QA 814

Query: 252 EE 253
           E+
Sbjct: 815 EQ 816


>gi|34580854|ref|ZP_00142334.1| amino acid ABC transporter substrate binding protein [Rickettsia
           sibirica 246]
 gi|28262239|gb|EAA25743.1| amino acid ABC transporter substrate binding protein [Rickettsia
           sibirica 246]
          Length = 241

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 61/212 (28%), Gaps = 23/212 (10%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K F +S L +                  +    L  G       +  ++ +G+  G
Sbjct: 1   MKFLKIFLLSCLLVAC-------------EKKETEKTLIVGTAADNPPYEFIQ-DGEIVG 46

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  +A+S  +      +     +      AL S+ ID+       T  R     ++F
Sbjct: 47  IDIDIIKAISERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSVTPERAEY--ISF 101

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      I      I +   L    + VQ G+  E    D   +  +         
Sbjct: 102 SDNYATARFAIIYRTGDNIQNSKDLENKIVGVQLGSVLEKKAHDL--SQTINIKVHSLAN 159

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
              +    +A   DA   +      LK  N  
Sbjct: 160 HLMLVEELKARVIDAIISEEFQGKKLKENNSN 191


>gi|282891082|ref|ZP_06299587.1| hypothetical protein pah_c045o106 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499075|gb|EFB41389.1| hypothetical protein pah_c045o106 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 266

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 89/262 (33%), Gaps = 19/262 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K  F  +L ++++   +         D   +  L  G+ +G   F  + ANG   GFDV
Sbjct: 5   FKIIFAFVLTIMLVLGWTKMKPFQT-DDSFAQQTLVIGLQSGYPPFEFMDANGKIIGFDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFR 119
           +    ++S +      +    +  +   L+L+  +ID++    + T  R  EI++     
Sbjct: 64  ELAEQIASKLGK---TLVIKDMEFEGEILSLKQGKIDLIVSGMNITPSRLKEIAMIPYHG 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                    F     +G+ S+     L   SI V++G+  E  +      H    H   F
Sbjct: 121 EAATSLSLVFWNEIPQGVHSIEDIAKLPNPSITVESGSLPEDYIN-----HYKNIHAKSF 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL---APAIIQG 233
           +         +  +  A         A  L    P   ++   +     +      + + 
Sbjct: 176 QGSLAPLMDVKYGKSVANLVQTD--VATYLQEKHPEIKILSIPLSKDDAILGFGIGVKKE 233

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           +   +  V      +  + EL 
Sbjct: 234 NQGLFQQVQHIIQELKASGELK 255


>gi|226365139|ref|YP_002782922.1| glutamine ABC transporter glutamine-binding/permease protein
           [Rhodococcus opacus B4]
 gi|226243629|dbj|BAH53977.1| putative glutamine ABC transporter glutamine-binding/permease
           protein [Rhodococcus opacus B4]
          Length = 489

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 74/287 (25%), Gaps = 32/287 (11%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              ++ L+          A                +     F     +G   G D+D   
Sbjct: 24  LTLLVTLVAPGIAGAQQPAPGNDY-------TIATDITFAPFEFQDESGKLVGIDMDLLA 76

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++          +   +       A+   Q + +      T  R+ +    F    +  
Sbjct: 77  AIAED---QGFTYRVNAVGFDAALQAVTGGQANGMIAGMSITDARKAT--FDFSDPYFES 131

Query: 126 GQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           G    ++     I+S   L G S+ V+ GT            +        F     +  
Sbjct: 132 GVQMGVLESNDSITSYEDLRGKSVAVKNGTEGATYAESIKDQYGFTTK--YFADSSSMFD 189

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             R     A   D   L        + +    + D +  +    A+ +G           
Sbjct: 190 EVRTGNSAAVFEDYPVLA---YGIKQGNGFKTVTDKVPGASYGFAVAKGQNAQLLQ---- 242

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
                   E      N+   +    +  +  +L  D S +    LGL
Sbjct: 243 --------EFNAGLANL--KASGQYDEILDTYLNADASDDDNSILGL 279


>gi|77465746|ref|YP_355249.1| ABC amino acid transporter, periplasmic binding protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|126464225|ref|YP_001045338.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|221369813|ref|YP_002520909.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
 gi|77390164|gb|ABA81348.1| ABC amino acid transporter, periplasmic binding protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|126106036|gb|ABN78566.1| extracellular solute-binding protein, family 3 [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221162865|gb|ACM03836.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
          Length = 263

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 71/235 (30%), Gaps = 14/235 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
            F   +  A  L  +   G L          F+    +G+  G ++     ++  +  + 
Sbjct: 16  TFAPAAWAADELELLV-PGQLSAATEGTYPPFSMRAPDGELDGLEIRVMGEVAKRLNLEY 74

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +    +  +   + L++ Q D++S   D T  R     + F       G   ++    
Sbjct: 75  VPVL---VKWESVLIGLEADQYDVISVAMDITEER--QQKVTFADGWLESGGRVVVRTDS 129

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I++ + L G  +     +       +      +      ++   +          DA  
Sbjct: 130 DIAAPADLKGRPVGGLVASNWTKIAEE------LGGEVKAYKAESDAMQDLANGNVDAII 183

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D  A     + N       +L + +S      AI +G       ++     M+ 
Sbjct: 184 TDAVA-AGYAIKNSNLP-LKMLDEPVSTIQKGFAIKKGKPHLTAAINKALGEMIA 236


>gi|325971016|ref|YP_004247207.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy]
 gi|324026254|gb|ADY13013.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp.
           Buddy]
          Length = 249

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 79/249 (31%), Gaps = 23/249 (9%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   + SIL L      +            K G++    +        V  NG   GF
Sbjct: 1   MKKTLLIISILALATTLMFAQGKKED------KSGYI-FASDATWPPLEFV-ENGQLTGF 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+    +   +    +++    +     F  L +   D ++     T  R+    + F 
Sbjct: 53  EVELMPLIGEKVG---TQMSVKNIPWDTIFAGLANGAYDGVASGVTVTEERKA--SMDFS 107

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 GQ  I+       +  +  L+   I VQ GTT +  L       N       ++
Sbjct: 108 TPILTAGQVVIIRSSDSAKVKGIGDLTNKKIGVQIGTTGDFALE------NYPVQRKAYD 161

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTE 236
            +            DA   D        L N+      ++     ++  +A A+ +G+  
Sbjct: 162 DIGLAIEDLLNGNVDAAVCDSLIASDFVLANENYKNRLMVAGAPFTEEDIAIAVQKGNKT 221

Query: 237 WYNIVSWTH 245
             ++++   
Sbjct: 222 LLDLINKGL 230


>gi|34495679|ref|NP_899894.1| carboxycyclohexadienyl dehydratase [Chromobacterium violaceum ATCC
           12472]
 gi|34101534|gb|AAQ57903.1| probable carboxycyclohexadienyl dehydratase [Chromobacterium
           violaceum ATCC 12472]
          Length = 256

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 66/222 (29%), Gaps = 12/222 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L DI  RG L+ G     + F+    A+G ++G D+D    L+ A+      +Q +P 
Sbjct: 23  DRLDDILARGELRVGTTGDYLPFSGRDAASGQYRGLDIDMAEDLARALGVK---LQLVPT 79

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +        +  + DI       +L R+     +   +                 ++ QL
Sbjct: 80  SWPTLMRDQRDGKFDIAMSGISVSLERQKQALYSAAYLNDGKTPIARCENAARFQTLEQL 139

Query: 144 S--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +     + V  G T E     + +         VF     I       + DA   D    
Sbjct: 140 NSKQTRLAVNPGGTNE----RFARQRLPNASLTVFPDNTRIFQQIIDGKADAMVTDAVET 195

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +         +        S  A  +   D  W   V  
Sbjct: 196 R-YQQKLHPELCAIHPDKPFDFSQKAYLLPN-DWRWKAWVDQ 235


>gi|139438085|ref|ZP_01771638.1| Hypothetical protein COLAER_00626 [Collinsella aerofaciens ATCC
           25986]
 gi|133776282|gb|EBA40102.1| Hypothetical protein COLAER_00626 [Collinsella aerofaciens ATCC
           25986]
          Length = 289

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 79/262 (30%), Gaps = 31/262 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFS------------TNASI-----LGDIKKR----GFLKCG 39
           M +      + L      + +              AS      L   + +      L  G
Sbjct: 1   MKRSRRSVAISLFAALAVACAFVVAIAGCSGSNDRASTSALEGLDASQAKDDNLKTLNVG 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
            +     F      GD  G DV+      + I   P   +Y  ++ +++   L S ++D 
Sbjct: 61  SDL-YPPFVYTDEYGDIVGLDVEILTEALARIGYKP---KYQLIDWEKKKELLASGELDC 116

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +  +   T          +        Q   +  +  I +++ L    + VQ+ T  E  
Sbjct: 117 VMGSFSMTG---RENEYRWAGPYLASRQVVAVDPQSDIYTLADLEDKVVAVQSTTKPEGI 173

Query: 160 LADYFKAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           L +    +  +      F     ++ A      DA     S+L       D    + IL 
Sbjct: 174 LLNRTNENVPQIKELYSFSDRSNLNPALVEGLVDAIAAHESSLLTY--EKDYGVTYRILD 231

Query: 219 DIISKSPLAPAIIQGDTEWYNI 240
           + + +  L  A    DT   + 
Sbjct: 232 EPLLEVGLGTAFDLSDTRSIDA 253


>gi|239948544|ref|ZP_04700297.1| amino acid ABC transporter substrate binding protein [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922820|gb|EER22844.1| amino acid ABC transporter substrate binding protein [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 241

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 61/210 (29%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +            +    L  G       +  ++ +G+  G D
Sbjct: 1   MK---FLKIFLLSFLLVSC--------EQKETEKTLIVGTAADNPPYEFIQ-DGEIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      +     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAISERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSVTPERSEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I +   L    + VQ G+  E    D   +  M           
Sbjct: 104 NYATARFAIIYRTGDNIQNSKDLENKIVGVQLGSVLEKKAQDL--SQTMNIKVHSLANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKARVIDAIISEEFQGKKLKENNSN 191


>gi|134294242|ref|YP_001117977.1| cyclohexadienyl dehydratase [Burkholderia vietnamiensis G4]
 gi|134137399|gb|ABO53142.1| cyclohexadienyl dehydratase [Burkholderia vietnamiensis G4]
          Length = 265

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 77/240 (32%), Gaps = 15/240 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +S L D+  RG L+         ++  + +G ++G D+D   +L++++      ++    
Sbjct: 33  SSRLDDVLARGTLRVCTTGDYKPYSYYRGDGRFEGIDIDMAESLATSLGVKAEFVKTSWS 92

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-- 141
           +    F+A    + DI       TL R+    + F      DG+  I+         +  
Sbjct: 93  SLTNDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTPIVRCADADKYQTIA 146

Query: 142 --QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                   + V  G T E     +F   N+     V+     I     A + D    D S
Sbjct: 147 QIDRPETRVIVNPGGTNERFAKQFFTHANLS----VYPDNVTIFKQILAGKADVMVTDAS 202

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               L+   +     V           A  + +GD  +   V    +  +          
Sbjct: 203 ETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVVFQQYVDQWLHLALATGAYQTISD 261


>gi|154508734|ref|ZP_02044376.1| hypothetical protein ACTODO_01242 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798368|gb|EDN80788.1| hypothetical protein ACTODO_01242 [Actinomyces odontolyticus ATCC
           17982]
          Length = 314

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 14/230 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  ++K+RG L+ G +        +   +   +G+DVD  +AL+  +  +       
Sbjct: 60  AALVPDEVKERGTLRNGASADYAPAEFLGDDSQTPQGYDVDINKALAKVMGLNEGTTN-- 117

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSV 140
                    AL + + D+   +   T  RE    L         G  + +          
Sbjct: 118 HAEFPTIIPALGT-KFDVGISSFTITSEREEQANLI---SYVEVGSAYGVAAGNPKNFDP 173

Query: 141 SQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +   G +I VQ GT  E    +           K   +  +   +I       + DA T 
Sbjct: 174 TDPCGKTIGVQTGTAQEDYATELSEQCVADGKDKITIMPHDLQTDIATKVIGGQYDA-TL 232

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             S +               + D++  +P   A+ + D +    +     
Sbjct: 233 ADSTVIGYTANLSSGK-IEQVGDVVDSAPQGVAVNKNDEQLTQAIQKAMQ 281


>gi|16801505|ref|NP_471773.1| hypothetical protein lin2443 [Listeria innocua Clip11262]
 gi|16414965|emb|CAC97670.1| lin2443 [Listeria innocua Clip11262]
          Length = 269

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 5/220 (2%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           KK   +  G  T       +  NG   G+DV+  + +   +       ++  ++     +
Sbjct: 32  KKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKF--KFKTMDFSNLLV 89

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           +L + ++DI++   + +  RE            F  Q  ++     I+    L+G  +  
Sbjct: 90  SLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINGTKDLAGKRVIT 149

Query: 151 QAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            A +   L L    +     +      +   +     +  R DA     +          
Sbjct: 150 SATSNGALVLKKINEEQGNNFEIAYEGQGSNDAANQLKTGRADATIS--TPFAVDFQNKT 207

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            P +  ++ D++S + +   + +  TE    V     +++
Sbjct: 208 SPIKEKVVGDVLSNAKVYFMLGKNKTELSKDVDKALQSII 247


>gi|307323375|ref|ZP_07602585.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
 gi|306890864|gb|EFN21840.1| extracellular solute-binding protein family 3 [Streptomyces
           violaceusniger Tu 4113]
          Length = 320

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 97/268 (36%), Gaps = 26/268 (9%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S  A +  D+ + G L+ G + G    A      +    G D+D   A++  +     ++
Sbjct: 59  SVAALLPADVARSGTLRMGSSIGAPPGAYYPNGPDKKPAGQDIDIADAVAKVLG---VRL 115

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----- 133
           +    + +    AL S + D+ + N   T  R  +  + F      DGQGF + K     
Sbjct: 116 ERQDASFETILPALGSGKFDVGTGNFGVTAERLKT--IDFV-TYINDGQGFAVKKGGTAL 172

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAH 189
            + ++ +++L G +I   AGTT E TL        K     Y   V+     +  A +  
Sbjct: 173 SRKVTDLTELCGLTIGTGAGTTFEATLTRQKGVCAKVGKKPYDVKVYAENGAVLTALQQG 232

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNIVSWTHY 246
           R D      S +  L+    + + H        +  +  A  +G      +   V+    
Sbjct: 233 RIDVVM---STINGLRYQAAQSAAHTSFLGEYHRLDVGFAFKKGSPLTRAFRAAVNELIE 289

Query: 247 AMVTA---EELGITQKNINQVSKDTTNP 271
             + A   E+ G +   I+    +    
Sbjct: 290 NGIYARILEKWGTSASAIDASRINPPEH 317


>gi|254457972|ref|ZP_05071399.1| PAS/PAC sensor hybrid histidine kinase [Campylobacterales bacterium
           GD 1]
 gi|207085365|gb|EDZ62650.1| PAS/PAC sensor hybrid histidine kinase [Campylobacterales bacterium
           GD 1]
          Length = 1040

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 105/309 (33%), Gaps = 35/309 (11%)

Query: 3   KDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           K   V +   ++   + FS+    +   +  IK    +K G + G   F  +  NG++ G
Sbjct: 2   KPLLVYLASFVLFVTSLFSSELNLSKDEIEWIKNNPVVKFGADKGWPPFDFLDKNGNYAG 61

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
              ++ + +             +  +      AL+S +       T      +    L F
Sbjct: 62  LSSEYIKIIEKKSGLKIKVYPVVWAD------ALKSAKSKEYDGLTCVVETEDRKKYLRF 115

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I   K   I S+  L G S+ +   +     + ++ K+++ K    + +
Sbjct: 116 SDAYLNVPMVIINRSKNSDIKSMEDLVGKSVSINKDS----YVHEWLKSNHPKIKLHLTK 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             EE   A    + +AY G+++    +       +  VI       + +  A+ + +   
Sbjct: 172 SNEESLEAVSVGKAEAYIGNLAVATYIINKYLINNLKVITKVKGFNTSIGMAVDKDNEIL 231

Query: 238 YNIVSWTHYAMVTAEELGITQ-----------KNINQVSKDTTNPDVQRFLGIDKSSNIG 286
           ++I+  +  ++ T E+  I               + + SK   +  + R   I+ +    
Sbjct: 232 FSIIQKSLKSITTQEDQEIKSRWRRVFSLEEKSQLLEFSKKQQDW-ISRHQVIEYTG--- 287

Query: 287 EALGLTKDW 295
                  DW
Sbjct: 288 -----DPDW 291



 Score = 43.9 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/209 (8%), Positives = 58/209 (27%), Gaps = 14/209 (6%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL-QSKQIDI 99
           +   + F     +    G   ++ + +          I +  + +     A+ + K   +
Sbjct: 288 DPDWLPFEAADKDKQHIGIAAEYVKEIQKYTG-----ITFKYVASSTWQEAISKVKDASV 342

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
                      ++    AF           +      + +++ ++   I V         
Sbjct: 343 SMIVETIDSKLDLQYTQAF---ISNSIIIVMNDDSSYVENLNMIADKKIAVIKEYGYVPK 399

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L   +K             ++E  +A    + DA     +    +           I+  
Sbjct: 400 LRQEYK----NIVFYEVNNIQEGLSAISTGKYDALLCTFTLGSYMISEMG-LHNVQIVGK 454

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +  + +   +++  +    I++    ++
Sbjct: 455 TMVSADVGFGVVKEYSPLVEIINKVLNSI 483


>gi|77407227|ref|ZP_00784192.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae H36B]
 gi|77174163|gb|EAO77067.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae H36B]
          Length = 119

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 2   YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
            +  F  + C+ I L F   ST+A+ L +IKK G LK G+   +  F    A    ++G 
Sbjct: 5   KRLTFYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEGM 64

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           ++D  + ++ ++   P    ++P  A+ R   ++  QIDI +R    T  R+ +  +
Sbjct: 65  EIDIAKKIAKSLSVKP---VFVPTTAQTREPLMEHGQIDIPNRTYTITPERKANYNI 118


>gi|307298817|ref|ZP_07578619.1| diguanylate cyclase with GAF sensor [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915242|gb|EFN45627.1| diguanylate cyclase with GAF sensor [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 602

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 77/258 (29%), Gaps = 29/258 (11%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K F    L L+  F  +                L  G ++    +  V  NG++ G
Sbjct: 1   MKNGKAFLSFFLVLLSTFAFA--------------DKLTFGGDSAYPPYEFVDENGEYTG 46

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+VD  +A+S         I+             +S ++D L      T  R+   G  F
Sbjct: 47  FNVDLMKAVSR---VAELDIEIELGEWDLVVEKFKSGELDGLI-GMAVTPERQKIYG--F 100

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                         K     +V  L G  I VQ        + DY   +++    +  E 
Sbjct: 101 SIPHNTLHMAIFYRKGSQEPTVDDLRGREIVVQRN----GVMDDYLLENSITDKIVAVES 156

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEW 237
             +      +   D   G      +L    +   +++ +          A A  + D   
Sbjct: 157 PLDGLKLLSSGTGD--FGLFEKYQSLYFAKENEIDNLEVSGATVFERDYAFATAKDDFAL 214

Query: 238 YNIVSWTHYAMVTAEELG 255
            N ++     +  + E  
Sbjct: 215 LNKLNKGLLLVRESGEYR 232


>gi|269795724|ref|YP_003315179.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Sanguibacter keddieii DSM 10542]
 gi|269097909|gb|ACZ22345.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Sanguibacter keddieii DSM 10542]
          Length = 264

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 87/249 (34%), Gaps = 26/249 (10%)

Query: 7   VSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           V+++ L  +     S++             +  I + G L    N     F  ++ +G+ 
Sbjct: 8   VALVALGGVLLAGCSSSDDTSPDGTAADGSVATISE-GMLTVCTNPPFEPFE-LEQDGEI 65

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+     +++ +  + + +     +  E   AL + Q D+++     T  R     +
Sbjct: 66  VGLDMSLVGEVAADLDLELAPLA-TGFDGIESGAALNANQCDVVASGITITDERAA--NM 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    +   QG ++ +   +S V+ L G  I VQ  TT      +           +VF
Sbjct: 123 DFSEAYFDADQGLLVTEGSDLSDVASLEGKKIAVQIATTGATWAEE------NGLEGVVF 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           + +     A +  + DA   DI+ L              +  +  +       + +G+T 
Sbjct: 177 DDLGAQVQALQTGQVDAVVNDIAVLSPFIT-----DGLEVAANFSTGEQYGFGVKKGNTA 231

Query: 237 WYNIVSWTH 245
               +  T 
Sbjct: 232 LLTAIDDTL 240


>gi|327462865|gb|EGF09187.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
 gi|328944941|gb|EGG39099.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 521

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 64/228 (28%), Gaps = 18/228 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIF 72
             +  I+   +L+ G+      F       +NG  K         G+DV   + ++  + 
Sbjct: 17  GTVHVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVKIEGTNQYANGYDVQIAKKIAQEMG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            +P  ++    +      AL S +ID++      T  R+  +   F    Y      ++ 
Sbjct: 77  KEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTAERKKEIA--FSNSYYTSEPVLLVR 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K    +S   L          +   + L +     +            ++  A  +   D
Sbjct: 132 KDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLSGAKKETAMGDFAQMRQALESGVID 190

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            Y  +       +  N                  A   I    +   I
Sbjct: 191 GYISERPEALTAETANSNFKMIQFEKGFEVGEEDASIAIGMRKDDNRI 238


>gi|325689080|gb|EGD31088.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 521

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 64/228 (28%), Gaps = 18/228 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIF 72
             +  I+   +L+ G+      F       +NG  K         G+DV   + ++  + 
Sbjct: 17  GTVHVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVKIEGTNQYANGYDVQIAKKIAQEMG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            +P  ++    +      AL S +ID++      T  R+  +   F    Y      ++ 
Sbjct: 77  KEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTAERKKEIA--FSNSYYTSEPVLLVR 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K    +S   L          +   + L +     +            ++  A  +   D
Sbjct: 132 KDGKYASAKTLEDFKDAKIT-SQQGVYLYNLIDQLSGAKKETAMGDFAQMRQALESGVID 190

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            Y  +       +  N                  A   I    +   I
Sbjct: 191 GYISERPEALTAETANSNFKMIQFEKGFEVGEEDASIAIGMRKDDNRI 238


>gi|159905547|ref|YP_001549209.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159887040|gb|ABX01977.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 252

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 17/245 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  L+I   +  +    I  + +  G L  G+   L  +   + NG+  GF+
Sbjct: 1   MK-----ILYVLLITLLSPIANVIDIENEYQITGVLTVGVYPDLPPYTY-EENGELSGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  +   P  I Y   N  E + A+++KQID    +     L   S  + +  
Sbjct: 55  VDLINEIAKRMEVTPEFICYNYTN--EPYDAVKNKQIDCAISS---NFLSPKSDDIEYSR 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +  +    +    ++ L    I V   +  E       ++  M +  I ++  +
Sbjct: 110 TYLSTYEVVMCEDGQKYFRLADLKDKKIGVLKNSEAEEKAKYLLRS--MNFEIITYDNPK 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +I+   ++   DA   D    Y   +  +   + +     +    ++  +   + E    
Sbjct: 168 DINNDLKSGNLDAAISDKH--YLNYMQKEN--DSLRFVQELDIKYVSIVVNSKNPELTKK 223

Query: 241 VSWTH 245
           +    
Sbjct: 224 IDEIL 228


>gi|150395363|ref|YP_001325830.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150026878|gb|ABR58995.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 283

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 69/259 (26%), Gaps = 19/259 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKR---------GFLKCGINTGLVGFAEVKANG 54
             F+    L      +   +   L D ++R           L+         F  +  +G
Sbjct: 11  RIFLLSAVLGAGSAMAQPKDLPRLFDARERIARPDLSGLARLRFLTTVDFPPFNFIDQSG 70

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF VD  R +   +  +  K Q   +   E   AL+  Q + ++     T       
Sbjct: 71  KLSGFHVDLAREICRELEIEA-KCQIQAVTYPELMPALEQGQGEAIAAGISVTSELRQRF 129

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +   +               I+  + L+   + V +GT  E  L  +F          
Sbjct: 130 AFSRAFMQLPARFVVNTKAAPAITGPADLAQRPVGVVSGTIHEAMLKAFFPE----LEAK 185

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDIISKSPLAPA 229
            F   + + +A R     A   D   L      +         E            L   
Sbjct: 186 GFSDRDSLLSALREGAVAAAFSDGMQLSFWVSGSLAGGCCAVIEGSYFSQRFLGEGLTIM 245

Query: 230 IIQGDTEWYNIVSWTHYAM 248
             + +      +     A+
Sbjct: 246 NRKAEPALTQAIDHALLAL 264


>gi|15892115|ref|NP_359829.1| amino acid ABC transporter substrate binding protein [Rickettsia
           conorii str. Malish 7]
 gi|157828066|ref|YP_001494308.1| amino acid ABC transporter substrate binding protein [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165932764|ref|YP_001649553.1| glutamine-binding protein [Rickettsia rickettsii str. Iowa]
 gi|229586390|ref|YP_002844891.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           africae ESF-5]
 gi|15619241|gb|AAL02730.1| amino acid ABC transporter substrate binding protein [Rickettsia
           conorii str. Malish 7]
 gi|157800547|gb|ABV75800.1| amino acid ABC transporter substrate binding protein [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165907851|gb|ABY72147.1| glutamine-binding protein [Rickettsia rickettsii str. Iowa]
 gi|228021440|gb|ACP53148.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           africae ESF-5]
          Length = 241

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+ I  L  L  +            +    L  G       +  ++ +G+  G D
Sbjct: 1   MK---FLKIFLLSCLLVSC--------EKKETEKTLIVGTAADNPPYEFIQ-DGEIVGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+S  +      +     +      AL S+ ID+       T  R     ++F  
Sbjct: 49  IDIIKAISERLNKK---VIIKNFDFNGLLAALVSENIDVAVAELSVTPERAEY--ISFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    I      I +   L    + VQ G+  E    D   +  +           
Sbjct: 104 NYATARFAIIYRTGDNIQNSKDLENKIVGVQLGSVLEKKAHDL--SQTINIKVHSLANHL 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +A   DA   +      LK  N  
Sbjct: 162 MLVEELKARVIDAIISEEFQGKKLKENNSN 191


>gi|307354255|ref|YP_003895306.1| putative PAS/PAC sensor protein [Methanoplanus petrolearius DSM
           11571]
 gi|307157488|gb|ADN36868.1| putative PAS/PAC sensor protein [Methanoplanus petrolearius DSM
           11571]
          Length = 532

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G +     +  +  NG   GF++D   A++  +      I   P    E    L+S
Sbjct: 39  VLVVGADEYFPPYEYIDYNGRPAGFNIDIMNAVAEEM---SLNISIRPGPWYEVRSDLES 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID +     ++  R+  L + F            + +   I     L+G  I V+ G 
Sbjct: 96  GRIDFI-SGMFYSGERD--LLVNFSDPYISVSHTIFVREGSDIGGAGDLTGKEIVVEEG- 151

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + DY    +     I      E      + + DA          L +        
Sbjct: 152 ---DIMHDYVMGLDGSNTIITTHNQSEALLLLASGKYDAALLSKLHGDYLIMQYGLSGVK 208

Query: 215 VILPDIISKSP 225
              P I  +  
Sbjct: 209 TAGPPIEIREY 219


>gi|146278099|ref|YP_001168258.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556340|gb|ABP70953.1| extracellular solute-binding protein, family 3 [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 287

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 71/239 (29%), Gaps = 14/239 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            ++ L ++  T+   +A +  +I+     +  ++      A  K +G  +GF+VD  + +
Sbjct: 8   GLVALALVAVTTLPAHAQV-AEIRDS--YRVALDGTFAPHAMPKLSGGVEGFNVDLAQLI 64

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
              +    + +            ALQ+   D L         R     L F         
Sbjct: 65  GERLG---AGMTVDAAQFSGLIPALQAGTYDFLVAPVTVNQERAE--NLLFTEGFMDTNF 119

Query: 128 GFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
            F++              G +I V  G+     L ++   +      + F    +   A 
Sbjct: 120 AFVVPAGSEKRDALEDFKGMTISVNRGSAYHTYLDEHAGEYGW--TVVPFGTNTDAVEAV 177

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              R DA     +   A       P    +  +I +      A    D    N +    
Sbjct: 178 ATGRADANLSGAT--VAAWAALQNP-AVDLSYEIETGLVWGLAFRLDDAATRNRIDLAL 233


>gi|315222036|ref|ZP_07863947.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315189002|gb|EFU22706.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 521

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 68/255 (26%), Gaps = 29/255 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K         +       + +A          +L+ G+      F        NG  K
Sbjct: 1   MKKICLSLFTFFLFSLGFVNTVHADE--------YLRIGMEAAYAPFNWTQDDDKNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +   P  ++    +      AL S ++D++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKQVAKELGKKPLVVK---TSWNGLIPALTSGKLDMIIAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      ++ K    ++   L+         +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVLLVKKDSAYANAKTLNDFKGAKIT-SQQGVYLYNLISQLT 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  +   D Y  +       +  N +                  
Sbjct: 167 GAKQETAMGDFAQMRQALESGVIDGYISERPEALTAEAANSKFKMIQFKKGFEVNQEDAT 226

Query: 226 LAPAIIQGDTEWYNI 240
           +A  + + D     +
Sbjct: 227 IAIGMRKNDNRIEQV 241


>gi|224418073|ref|ZP_03656079.1| extracellular solute-binding lipoprotein [Helicobacter canadensis
           MIT 98-5491]
 gi|253827402|ref|ZP_04870287.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141610|ref|ZP_07803803.1| L-cystine-binding protein tcyA [Helicobacter canadensis MIT
           98-5491]
 gi|253510808|gb|EES89467.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130641|gb|EFR48258.1| L-cystine-binding protein tcyA [Helicobacter canadensis MIT
           98-5491]
          Length = 257

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 7/219 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G       F+ V  +G   G+DV+  R L     D      +        FL L S 
Sbjct: 27  IKVGSEGAYKPFSYVDKDGKITGYDVEVVRILQE--IDPSLNFSFNYAPWNALFLGLDSA 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           + D+L+     T  RE           +     F+       I++ + L G       G+
Sbjct: 85  RFDMLANQIIKTQEREEKYLFN-AESYFVSTSQFVTRADNADINTTADLKGKIAGGVVGS 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L D+   +        ++ +  +       R D +  D  A  A  +        
Sbjct: 144 AHTKILEDWNNQNGNILEIRYYKDLIPLLQDLVNKRIDVHLND-PASIADIIKEQN-LNL 201

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            +L + IS+SP+     + +    +++     A++ A+E
Sbjct: 202 KVLDERISQSPVYFVFRKENLSN-DLIQKIDAALLKAKE 239


>gi|197122487|ref|YP_002134438.1| histidine kinase [Anaeromyxobacter sp. K]
 gi|196172336|gb|ACG73309.1| histidine kinase [Anaeromyxobacter sp. K]
          Length = 597

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 12/225 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            R  +  G +     +  +   G   GF+VD  RA++  +     ++++      +   A
Sbjct: 50  ARQRVIVGGDQSYPPYEFLDQQGRPAGFNVDLTRAVARTVG---LEVEFRLGRWADMRRA 106

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150
           L++ +ID L +   ++  R     + F P +          +    + S++ L+G  + V
Sbjct: 107 LETGEIDAL-QGMSFSEQRAK--EVDFTPPSLIVHHAIFARRGDRPVRSLADLAGKEVLV 163

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                    + D  +  +     +  +   ++     A + D           L      
Sbjct: 164 LRS----GIMHDTLRREHPDVKVVPADTHADVLRQLAAGKHDYAVMAKLPGLYLVRELG- 218

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            S    +    +      A+ +G+      ++     +    E  
Sbjct: 219 LSNLTAMDQPAAVERYGYAVRRGNEALAARLAEGLAIVRNTGEYQ 263


>gi|116617265|ref|YP_817636.1| ABC-type amino acid transport system, periplasmic component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096112|gb|ABJ61263.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 271

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 12/212 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+  LK G        A   + G   GFDVD   A +         +Q++          
Sbjct: 41  KQKVLKIGATGTSFPTAYK-SKGKLVGFDVDVINAAAKKAGYK---VQWVTGEFDGLLGQ 96

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + ++D ++ +   T  R+      F  I   +     ++K    ++++ L G +I   
Sbjct: 97  LDNNKLDTVANDVAITPERKAKYK--FSNIYNKEETTVAVNKDSDYNTLNDLEGKTIAGA 154

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           + +     L DY    N K    +++  +    A  A   D      + L AL    + P
Sbjct: 155 SASNNTKNLQDY----NSKIKFKLYDARDVTFQALLAGHVDGVVNTRNNLEALIKAKNYP 210

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               ++    +   +A    + D+E   I+  
Sbjct: 211 --WKVVKGSAATVNIALPFRKDDSESAKILKK 240


>gi|328914461|gb|AEB55294.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila psittaci 6BC]
          Length = 279

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 74/249 (29%), Gaps = 18/249 (7%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +       +     LF    S++      +K+      G N     F  +  NG+  G
Sbjct: 22  MKQLISYLRILFFGCCLFLVGCSSS------VKRDKIWIVGTNATYPPFEFIDENGNTIG 75

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+S  +  +   +++   +     L L+  +ID +      T  R+  + +  
Sbjct: 76  FDIDLAEAISRQLGKELKVVEF---SFDALILNLKKHRIDAILAGMSITQSRQKEIAMLP 132

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      +  +     +V  LS   S+ VQ GT  E  L               F+
Sbjct: 133 YHGEGVRELTVVSKQPVNKDTVLPLSKYSSVAVQTGTFHEDYLLSL-----PGVCVRSFD 187

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTE 236
              E+       +      + S    +           + LP+          I +   E
Sbjct: 188 STLEVLMEVGCKKSPIAVLEPSVARVVLKEFPDLYTTTVDLPEDQWVLGCGLGIAKDRPE 247

Query: 237 WYNIVSWTH 245
               V    
Sbjct: 248 HVKEVQNAL 256


>gi|329942583|ref|ZP_08291393.1| arginine Periplasmic Binding Protein [Chlamydophila psittaci Cal10]
 gi|313847807|emb|CBY16798.1| membrane transport protein, solute binding component [Chlamydophila
           psittaci RD1]
 gi|325507063|gb|ADZ18701.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila psittaci 6BC]
 gi|328815493|gb|EGF85481.1| arginine Periplasmic Binding Protein [Chlamydophila psittaci Cal10]
          Length = 258

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 74/249 (29%), Gaps = 18/249 (7%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +       +     LF    S++      +K+      G N     F  +  NG+  G
Sbjct: 1   MKQLISYLRILFFGCCLFLVGCSSS------VKRDKIWIVGTNATYPPFEFIDENGNTIG 54

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+S  +  +   +++   +     L L+  +ID +      T  R+  + +  
Sbjct: 55  FDIDLAEAISRQLGKELKVVEF---SFDALILNLKKHRIDAILAGMSITQSRQKEIAMLP 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      +  +     +V  LS   S+ VQ GT  E  L               F+
Sbjct: 112 YHGEGVRELTVVSKQPVNKDTVLPLSKYSSVAVQTGTFHEDYLLSL-----PGVCVRSFD 166

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTE 236
              E+       +      + S    +           + LP+          I +   E
Sbjct: 167 STLEVLMEVGCKKSPIAVLEPSVARVVLKEFPDLYTTTVDLPEDQWVLGCGLGIAKDRPE 226

Query: 237 WYNIVSWTH 245
               V    
Sbjct: 227 HVKEVQNAL 235


>gi|240172049|ref|ZP_04750708.1| extracellular solute-binding protein [Mycobacterium kansasii ATCC
           12478]
          Length = 259

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 73/222 (32%), Gaps = 10/222 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            R  L+ G       F  +   G   GFD+D    ++ A+  + S I+Y   +    F A
Sbjct: 25  DRRTLRVGAAFPDPPFNGMPTGG---GFDIDLMTEIARALGTEVSFIRYEGADFNGIFGA 81

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S   D ++  T  T  RE         +           +   + S+  LSG +I VQ
Sbjct: 82  LNSGDYDCVAAGTTVTPEREKQAAFVAPYLISGQSLAVDTARLPNVRSIDDLSGLTIGVQ 141

Query: 152 AGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            G T++                +  +  V           CDA+      L        +
Sbjct: 142 QGNTSQPIANRLVAEGRAGAVRVYDYGAVRSAITDLTTGGCDAFMKLAPVL----TELVK 197

Query: 211 PSEHVILPDII--SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           P + V +      S   +A  + + D +    ++    A+  
Sbjct: 198 PVQGVEVVQRTGISVEKIAIGVPKTDHDLLERITTAQAALEE 239


>gi|196248814|ref|ZP_03147514.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Geobacillus sp. G11MC16]
 gi|196211690|gb|EDY06449.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Geobacillus sp. G11MC16]
          Length = 288

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 83/258 (32%), Gaps = 18/258 (6%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K       F  ++ ++    +  S+    L  +KK+G +  G       +A  + NG+
Sbjct: 1   MKKVILYLGLFALLIGMVGCSSSQTSSFDDTLEALKKKGVVYVG-FANEKPYAY-EENGE 58

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            KG  VD  + +   +     K++       E    L + + D+++        R     
Sbjct: 59  LKGEAVDIAKEIFKQLG--IEKVEGRLAEFNELIPGLNAGKFDVITAGMAILPNR--CEK 114

Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F    Y  G   ++ K     + S   ++       A  ++ + +    ++   +   
Sbjct: 115 VDFAEPEYQVGDALVVKKGNPKNLHSYEDIAKLPDVKIAVMSSAMEVDYLKQSGVREEQI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAP 228
           ++   +  +  A +  R DA TG    +     +  +       +          S  A 
Sbjct: 175 VLVPDIPAVIDAVKTGRADAATGTQLTMKEALQSAGQKELELVSDFKQPDVEGIPSYGAA 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
              Q D +     +    
Sbjct: 235 VFRQDDDQLREAYNKELK 252


>gi|89073122|ref|ZP_01159661.1| putative transglycosylase, Slt family protein [Photobacterium sp.
           SKA34]
 gi|89051075|gb|EAR56532.1| putative transglycosylase, Slt family protein [Photobacterium sp.
           SKA34]
          Length = 494

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 79/234 (33%), Gaps = 16/234 (6%)

Query: 12  LIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L  +           L  I++ G L+ G     + +  + A+G   G D +  +  +
Sbjct: 1   MLALLLSGCQWQEKPLDPLERIRESGVLRVGTLNNQLSY-YIGADG-PTGLDYELAQRFA 58

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +                 F AL++  +DI++     T  R    G    P  Y+  Q 
Sbjct: 59  KELGVKLE--MQTMFTLSGLFPALKNGDVDIVAAGLTVTPRR--LQGFHPAPAYYYASQV 114

Query: 129 FIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDA 184
            +  K   +         +  S+ V A ++ E  L +  K + N+ +  I    ++++  
Sbjct: 115 VVYKKGKRRPRDLEELANTERSLAVVASSSHERQLEEIKKKYPNLTWQSIKETDIDDLLR 174

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                  D    D   +    L    P   + L ++    P++  +   + +  
Sbjct: 175 KVANGELDYTVADSVDVA--LLQRTHPELAIAL-ELTEDEPISWFVKDNNNDSL 225


>gi|315649610|ref|ZP_07902695.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Paenibacillus vortex V453]
 gi|315275083|gb|EFU38458.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Paenibacillus vortex V453]
          Length = 284

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 89/261 (34%), Gaps = 10/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++++   +     S L   K++G++  G       +A  +A+G+  G  
Sbjct: 1   MKKVVVLLLSLVMVVSLAACGDKGSTLERAKEQGYITVG-FANEKPYAYKEASGELTGEA 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  R +   +     + +            LQ+++ D+++        R  ++  A   
Sbjct: 60  VEIARVILERLGIKEMRGEL--TEFGSLVAGLQAERFDLITAGMFINPDRCSAVLFANPE 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +  +          G+ S   ++       A  T  + +    K+       I      
Sbjct: 118 YSIGEALAVKQGNPSGLGSYEDIAKDDQAKVAVMTGAVEIGYMEKSGIPSDRIIQVPDQA 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPS-------EHVILPDIISKSPLAPAIIQG 233
              +A +A R  A T    +L A+  +    +       E  ++     +   A A  Q 
Sbjct: 178 SAISALQADRVQAITMTGPSLQAMLDSASDDNIERVADFEQPVIDGESVRGYGATAFRQA 237

Query: 234 DTEWYNIVSWTHYAMVTAEEL 254
           DTE+    +     M  + EL
Sbjct: 238 DTEFQEAYNAELEKMKESGEL 258


>gi|296188392|ref|ZP_06856783.1| diguanylate cyclase (GGDEF) domain protein [Clostridium
           carboxidivorans P7]
 gi|296047013|gb|EFG86456.1| diguanylate cyclase (GGDEF) domain protein [Clostridium
           carboxidivorans P7]
          Length = 838

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 63/281 (22%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     ++ +   G+  GFD++  +A + A+     K++       +    L+S
Sbjct: 70  TITIGDDKDYPPYSFIDEKGNPSGFDIELAKAAAEAMG---FKVKIKLGVWNDIRNELES 126

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID ++        ++     +F   +            K + ++S L G ++ V+A  
Sbjct: 127 GKIDAIAGMF---YSKDREKNYSFTTKSTISRADVFTRNGKSVKNISDLKGKTVVVEADE 183

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +E  L    K  N+  + I     E        ++ +             +  D  S  
Sbjct: 184 ISEEYL----KKQNLGINFIEVSSSENALKLVSMNKYEYSVVPTVIGN-YFIKKDNLSNL 238

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
                +I+      A+ +G+ +    ++                                
Sbjct: 239 KNNGLVINPDNYCFAVKKGNDDLLFALNG------------------------------- 267

Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                          GL      +I++  G Y E++++ LG
Sbjct: 268 ---------------GL------QILKSTGKYDEIYNKWLG 287


>gi|295105380|emb|CBL02924.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 279

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 9/207 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IK +G +  G            A+G++ GFD +   A+ + +  +P    ++ +N  
Sbjct: 50  LDYIKGKGKMVIGYTV-YEPMNYTDADGNFTGFDTELATAVCAKLGVEPE---FVEINWD 105

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            + + L +K ID +      T   +I    A       + Q  ++ +    +S + L+G 
Sbjct: 106 TKVVELDAKSIDCIWNGMTLTE--DIMANTATTKAYAKNAQVVVVKESTAYTSTADLAGK 163

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           ++  +AG+  E  +      +  K   +      +      A   DA   D++   A+  
Sbjct: 164 TVVAEAGSAGEAAIQ--GDENLAKADYVSKSVQTDCLMEVAAGTADAAVLDLTLANAMIG 221

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233
                +   I+ ++ ++     A  +G
Sbjct: 222 EGTDYASLKIVDELNAEE-YGVAFRKG 247


>gi|255526393|ref|ZP_05393306.1| diguanylate cyclase and metal dependent phosphohydrolase
           [Clostridium carboxidivorans P7]
 gi|255509899|gb|EET86226.1| diguanylate cyclase and metal dependent phosphohydrolase
           [Clostridium carboxidivorans P7]
          Length = 826

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 63/281 (22%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     ++ +   G+  GFD++  +A + A+     K++       +    L+S
Sbjct: 58  TITIGDDKDYPPYSFIDEKGNPSGFDIELAKAAAEAMG---FKVKIKLGVWNDIRNELES 114

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID ++        ++     +F   +            K + ++S L G ++ V+A  
Sbjct: 115 GKIDAIAGMF---YSKDREKNYSFTTKSTISRADVFTRNGKSVKNISDLKGKTVVVEADE 171

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +E  L    K  N+  + I     E        ++ +             +  D  S  
Sbjct: 172 ISEEYL----KKQNLGINFIEVSSSENALKLVSMNKYEYSVVPTVIGN-YFIKKDNLSNL 226

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
                +I+      A+ +G+ +    ++                                
Sbjct: 227 KNNGLVINPDNYCFAVKKGNDDLLFALNG------------------------------- 255

Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                          GL      +I++  G Y E++++ LG
Sbjct: 256 ---------------GL------QILKSTGKYDEIYNKWLG 275


>gi|256851769|ref|ZP_05557157.1| ABC transporter permease component [Lactobacillus jensenii
           27-2-CHN]
 gi|260661514|ref|ZP_05862426.1| ABC transporter permease component [Lactobacillus jensenii
           115-3-CHN]
 gi|282931983|ref|ZP_06337446.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|297205391|ref|ZP_06922787.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|256615727|gb|EEU20916.1| ABC transporter permease component [Lactobacillus jensenii
           27-2-CHN]
 gi|260547571|gb|EEX23549.1| ABC transporter permease component [Lactobacillus jensenii
           115-3-CHN]
 gi|281303889|gb|EFA96028.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|297149969|gb|EFH30266.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 534

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 84/300 (28%), Gaps = 30/300 (10%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGDW 56
           M  K+ ++ IL  ++     F  N   +   K  G L+ G+      +   +   ANG  
Sbjct: 1   MKSKNTWLVILAFLMASIGFFGNNTQEVQAAKDNGVLRIGMEANYPPYNWTQTTSANGAI 60

Query: 57  ---------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                     G+DV               K+  +         AL S +ID++      T
Sbjct: 61  PIEGSKTYANGYDVQIA---KLIGKKLGKKVVAVKTEWDGLLPALTSGKIDLIIAGMSPT 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
             R     + F           I  K       +S+    GA +  Q GT       D  
Sbjct: 118 AERRK--AINFSEPYRKSTFVVITKKTSKYANATSLDDFKGAKLTAQQGTLHY----DLI 171

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-----D 219
           K           +    +  +  +   D Y  +     + K      +   I        
Sbjct: 172 KQLKGAIRENAMKDFAAMRQSLISGTIDGYVAEDIEAQSFKSVYPDSTSINISKMKGFHV 231

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
             S S  +  + +G+ +    V+     +   +   +    + +      +     F+  
Sbjct: 232 SASDSETSIGVKKGNDKLLAQVNAALATISNKKRDQLMATAVKEQPTTDNDKKTNWFVST 291


>gi|189423783|ref|YP_001950960.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189420042|gb|ACD94440.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 755

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 76/223 (34%), Gaps = 25/223 (11%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK G+       + V  +G   G D +  R +S  +      I++L +       ALQS 
Sbjct: 168 LKIGVCATREPLSFVDKSGRISGHDGELARWVSIRL---NRPIEFLNMKFMALIPALQSG 224

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-----------KGISSVSQLS 144
           +ID++      T  R+ +  + F    + + Q  ++ K              +SS   L 
Sbjct: 225 KIDLIISGMTATAERKKT--VNFTQPYFANAQVMLVRKPGVTPPASQSGATKLSSADDLK 282

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYA 203
              I V  G+  +      +         + ++   ++  A ++ + D A+    + L  
Sbjct: 283 DKRIGVLLGSVHDTYATKQYPRA----TVLQYKSPSDLVLAVKSGKVDAAFYTHETLLEV 338

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           L+       E  +L   +   P+     + +       +    
Sbjct: 339 LRQ----DPELALLGKPLFSVPIGVGFNKTNDTLRTQFNSFLK 377



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 27  LGDIKKRGFLKCG-INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           +   K +G L  G ++   + F  +  +    GFDV+     ++ +  +P    +  +  
Sbjct: 403 VDGAKSKGRLVIGIVSDKGMPFTIM-KDNRMIGFDVELAERFAAWLGKEP---VFADMEF 458

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                A  + +ID +      T  R+  +   F    Y  G      KK    S 
Sbjct: 459 GSLIAAASTNKIDAIFSTLMITDERKKQVA--FSDPYYELGASVFALKKNIAESA 511


>gi|121609112|ref|YP_996919.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121553752|gb|ABM57901.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 281

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 82/259 (31%), Gaps = 8/259 (3%)

Query: 1   MY-KDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M  K   + ILC+++      S ++  + L  I +   ++ G       FA    +G   
Sbjct: 1   MKFKHGMLGILCIMVAGLLQVSAASAETTLQRIVRTSEVRIGYANEN-PFAYTTPDGVVT 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   +  R + + +      +  +          L++ + D+++     T  R   +  A
Sbjct: 60  GESPEIARKVFARLGVKK--VDAVLTEWGALIPGLRAGRFDVIAAGMYVTPGRCKQVAFA 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                  D    +    KG+ S + ++  +    A       L    KA       +   
Sbjct: 118 DPQYQIADTLLVLKGNPKGLKSYADIARQANVKLAVMAGTAELGYARKAGIKDGQILQVP 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDT 235
                  A R  R DA  G    + +L        E     + D       A A    D 
Sbjct: 178 DTTAQLQAVRTRRADAAVGTALTMKSLAAKGGAQLEALDDFIDDPKHTGYGALAFRPEDA 237

Query: 236 EWYNIVSWTHYAMVTAEEL 254
           +  + V+   +A +  ++ 
Sbjct: 238 DLRDAVNEVLHAWLGTDDH 256


>gi|309777759|ref|ZP_07672708.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914525|gb|EFP60316.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 277

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 73/265 (27%), Gaps = 25/265 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK--- 57
           M +    +     +L     S +   +     +     G+      F             
Sbjct: 1   MKRLLTAAFAMTFLLAGCGSSDDDKNVSKNTGKETFTVGMECNYAPFNWQTKEQTKTSVS 60

Query: 58  --------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                   G+DV   R ++  +     +I    ++      AL+S +ID +         
Sbjct: 61  IGGAGFCDGYDVRVARQIAKDL---DREIVIKKVSWDGLQPALESGEIDAIIAGMTKDET 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAH 167
           RE   G+ F    Y      I+ K    +  + +        +   +T   T+ D  K  
Sbjct: 118 RE--NGIDFTSPYYESEMVMIVRKGDAAAKFNDIQQFKGKTIIGQKSTNYDTIIDQIKGV 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIISK 223
                        E+  + +    D  T ++         N   +          DI + 
Sbjct: 176 KHAT---PKATYPEMILSLQNKEVDGITAELPVAEGAVEANKDLTIVHFAKGKGFDIDTS 232

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAM 248
             +       D+E +N V  +   +
Sbjct: 233 VSVGLKEGSRDSELFNAVQKSLDGI 257


>gi|153855473|ref|ZP_01996604.1| hypothetical protein DORLON_02618 [Dorea longicatena DSM 13814]
 gi|149752127|gb|EDM62058.1| hypothetical protein DORLON_02618 [Dorea longicatena DSM 13814]
          Length = 272

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 63/189 (33%), Gaps = 5/189 (2%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                L        +    + G   F   + +G+ KG+DVD     S     +   +++ 
Sbjct: 30  AKDDKLDLGLDVDSVTVATSPGYEPFEF-EEDGELKGYDVDIWNEFSERTGIE---VKWE 85

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
             +       L S + D +S     T  R+ S   +     Y      +      I SV 
Sbjct: 86  YADFSGLLGLLSSGKADAVSAQMSPTEERKDSYLFSDPVDYYGS-TVVVAKDNDEIKSVK 144

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            LSG ++ V +G + +  + D +   ++K+       +E +       R DA        
Sbjct: 145 DLSGKTVGVGSGNSMQQAVEDMYPKGDVKFEVYTSATLEAMFDDIAYGRIDAVLAQDIQT 204

Query: 202 YALKLTNDR 210
           Y    +N  
Sbjct: 205 YMAMKSNKN 213


>gi|325000354|ref|ZP_08121466.1| ABC transporter substrate-binding protein [Pseudonocardia sp. P1]
          Length = 251

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 60/221 (27%), Gaps = 13/221 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  G+            +G    G  VD   A+++ +      ++Y           +
Sbjct: 13  GVLTVGVEPTYPPNEFTAPDGSTVVGMSVDLGTAVAAKLG---LGVRYETGQFSGIIPGV 69

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           Q  + +    +      R  S  +             +        +   L G  + VQA
Sbjct: 70  QGGRYEAGMSSFTINPER--SGVVDMVSYFSAGTSLVVAAGNPEGITPDDLCGRPVGVQA 127

Query: 153 GTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           GTT    +         A              ++  A  A+R DA   D     A     
Sbjct: 128 GTTQTEEIVGRDEACVAAGREPIRVTELLAQTDVTLALVANRVDAMLADSP--VASYAVT 185

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                  I+      +P    + + D E  + V      ++
Sbjct: 186 QSRGTTEIVGRPYDTAPYGIVLPK-DGELSDPVRAALQELI 225


>gi|326780215|ref|ZP_08239480.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
 gi|326660548|gb|EGE45394.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 324

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGL-VGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +   I++RG L+ G +             +    G ++D    ++  +   P   
Sbjct: 59  AVAALVPEAIRERGTLRIGASADAVPPLGFYATDDRTRIGSEIDIATLVADTLGLKPE-- 116

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136
            +  ++ +  F+ L S + D +  N   T  R+      F      D   F   K     
Sbjct: 117 -FEEVSWENLFVGLDSSKFDGVLSNVTVTEERKE--KYDFA-TYRLDNIAFEAKKGSGWK 172

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCD 192
           +   + ++G +I V +GT  E  L ++ + +            F++  +     ++ R D
Sbjct: 173 VKGPADVAGKTISVSSGTNQEKILVEWSEENVKAGREPVDIKYFQKENDYYLPLQSGRID 232

Query: 193 AYTGDISALYALKLTNDR 210
           A+ G   +      T+ +
Sbjct: 233 AHLGPSPSAAYHVATSGQ 250


>gi|182439551|ref|YP_001827270.1| putative ABC transporter substrate-binding protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178468067|dbj|BAG22587.1| putative ABC transporter substrate-binding protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 324

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGL-VGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +   I++RG L+ G +             +    G ++D    ++  +   P   
Sbjct: 59  AVAALVPEAIRERGTLRIGASADAVPPLGFYATDDRTRIGSEIDIATLVADTLGLKPE-- 116

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136
            +  ++ +  F+ L S + D +  N   T  R+      F      D   F   K     
Sbjct: 117 -FEEVSWENLFVGLDSSKFDGVLSNVTVTEERKE--KYDFA-TYRLDNIAFEAKKGSGWK 172

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCD 192
           +   + ++G +I V +GT  E  L ++ + +            F++  +     ++ R D
Sbjct: 173 VKGPADVAGKTISVSSGTNQEKILVEWSEENVKAGREPVDIKYFQKENDYYLPLQSGRID 232

Query: 193 AYTGDISALYALKLTNDR 210
           A+ G   +      T+ +
Sbjct: 233 AHLGPSPSAAYHVATSGQ 250


>gi|330429519|gb|AEC20853.1| extracellular solute-binding protein [Pusillimonas sp. T7-7]
          Length = 293

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 69/257 (26%), Gaps = 14/257 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F  +   +       S  A     +K+ G L  G +     +A         GFD DF
Sbjct: 22  KMFAGLALSMAAVAGMQSAQAQT--TVKE-GVLTVGTDLTYPPYAYFDNK-VPAGFDPDF 77

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  +      +     +       L++ + D+++     T  R   +       T 
Sbjct: 78  SHLMAKKLGLKADILDTRFADLVL---GLRANRFDMVASALYVTPERAKQIDYVPYLKTG 134

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFER 178
                    K       + L G  +      +    L         +A       + F  
Sbjct: 135 SSLIVLNSSKASPAV-PADLCGMKVSTIKAASWTPKLTAVSDTTCKEAGKQPIRIMEFPT 193

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A ++   DA   D +  + +          V    +I    +   + +   E  
Sbjct: 194 SPEALLALKSGAADAMMEDAAVSHQMATEMKDDI-KVTSNGLIYPIVIGLGVNKNKPELR 252

Query: 239 NIVSWTHYAMVTAEELG 255
           + +S        + E  
Sbjct: 253 DALSKALADARDSGEYQ 269


>gi|226327565|ref|ZP_03803083.1| hypothetical protein PROPEN_01436 [Proteus penneri ATCC 35198]
 gi|225204091|gb|EEG86445.1| hypothetical protein PROPEN_01436 [Proteus penneri ATCC 35198]
          Length = 231

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 91/273 (33%), Gaps = 64/273 (23%)

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D D    +++ +      ++  P N   R   L SK++D+++ N   T  R    
Sbjct: 7   KLAGYDADIANEIANDLGVK---LELRPTNPANRIPLLSSKKVDLIAANFTITDERAK-- 61

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F    +  GQ FI  K   +++  Q+    I    GT  E+TL + +         I
Sbjct: 62  QVDFSIPYFATGQKFIARKG-VLTNPEQIHSLRIGADKGTVQEITLRERYP----DTKVI 116

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQ 232
            ++      AA R     A T D + L  L          +  I P  I++   A A  +
Sbjct: 117 SYDDTPLAFAALRNGNVQAITQDDAKLVGLLANLPDAIKADFEISPFSITREYQAVAAAK 176

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           G+    N ++ T                                            L L 
Sbjct: 177 GEERLINEINNTL-------------------------------------------LRLE 193

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K+         G   E+++R  G +++   PRG
Sbjct: 194 KE---------GKAEEIYNRWFGPETKSAQPRG 217


>gi|92114902|ref|YP_574830.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91797992|gb|ABE60131.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 279

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 77/241 (31%), Gaps = 24/241 (9%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            +F  + +  A      +    ++  I+     F      G+  GF++D    L +    
Sbjct: 27  GMFLATGTAEA------RGTDEVRLAIDVPYEPFVYRTPEGELAGFEIDLGNELCARA-- 78

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              +  ++  +       L S++ D +  +   T  RE    + F    Y     +I  +
Sbjct: 79  -DLECTWIEQSWDGIIPGLLSRKYDAILSSMAITPERE--NQVLFSIPYYNTPSVWITRR 135

Query: 134 KKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            + I     + L G S+ VQ GT  +  +   +           +   +++     A R 
Sbjct: 136 DRDIDISDKASLEGLSVGVQRGTIRDSYVTQMY---GDTLDIRRYSSSQDVANDLVAGRL 192

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-------APAIIQGDTEWYNIVSWT 244
           D    D          N+  SE   + D I K P+       A A  + D       +  
Sbjct: 193 DLSFEDYPLAVDTFHFNEADSEFKQIGDSIKK-PVSIFGKGAAMAFRKRDEALAEKFNTA 251

Query: 245 H 245
            
Sbjct: 252 L 252


>gi|228912172|ref|ZP_04075887.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis IBL 200]
 gi|228847509|gb|EEM92448.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis IBL 200]
          Length = 263

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 73/231 (31%), Gaps = 14/231 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           ++    S + +      +     +K G + G   F   +     KGFD +   A +    
Sbjct: 18  LLSACGSNTASEKTNEKV-----VKVGTSAGRSPFIFKEGE-KVKGFDAEIIEAAAKKAG 71

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +++   + +  F  L S +ID ++     +  R+      F     + G  F + 
Sbjct: 72  YK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSIPYVYSGSVFAVK 126

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I S+  L G ++ V  GT  E  L    K +         +   E        R 
Sbjct: 127 KDNHTIKSLEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTFSEDPTAE-LNEVGLGRV 185

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           DAY  D   +          +  +    +     +A    +   +  +I  
Sbjct: 186 DAYYNDKVQVETTITKAKLDNVKIGFGPLEWGE-IAFPFAKKSEKLEDINK 235


>gi|328464919|gb|EGF36207.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 537

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 87/300 (29%), Gaps = 32/300 (10%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M   F    ++L ++I  F  FS N+       K    LK G+      +          
Sbjct: 1   MKSRFRWIAALLTILISLFIGFSFNSRESQAAKKDSSVLKIGMEANYPPYNWTQPKKTNG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVPIDGSNSYANGYDVQIAKIIGKRLHKK---VVVEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      +S   GA +  Q GT     +  
Sbjct: 118 PTAERRK--AINFSEPYRKSTFVVITNKASKYSNAKKLSDFKGAKLTAQQGTLHYDLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVIL 217
              A               +  +  +   D Y  +     +    N        ++    
Sbjct: 176 LKGAKREP----AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMTGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKREQLMSQAIREQPKAGNETKKENWL 291


>gi|295101502|emb|CBK99047.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 275

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 72/256 (28%), Gaps = 16/256 (6%)

Query: 1   MYKD------FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M              L        S ++             L  G +     +  +  +G
Sbjct: 1   MKHRISRRAFLRGCTLLAASAAVGSLTSCGGTNAKDSSLPQLIVG-SDTYPPYIYLNNDG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G DV+        +       ++ P++ +++   ++S  ID +         RE   
Sbjct: 60  VPAGIDVEIATEAFRRMGY---AARFEPIDWEQKTDLVESGTIDCIWGCFSM-DGREEVY 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT-LADYFKAHNMKYHP 173
                       Q   +     I ++  L+G +I VQ+    E   L+            
Sbjct: 116 RW--AGPYMVSRQVAAVDADSSIRTLGDLAGKTIAVQSTGKPEEIFLSGSDPRIPQTVEV 173

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              E      A       DA     +    L+   D   E  IL + +  + L  A  + 
Sbjct: 174 FSTEDRSVQYAMLACGYVDAIAAHET--AILQYMKDNSVEFRILEEPLLVTGLGIAFAKN 231

Query: 234 DTEWYNIVSWTHYAMV 249
           D+   +I      A +
Sbjct: 232 DSRGLDIQLNAVLAQM 247


>gi|302526369|ref|ZP_07278711.1| ABC transporter substrate-binding protein [Streptomyces sp. AA4]
 gi|302435264|gb|EFL07080.1| ABC transporter substrate-binding protein [Streptomyces sp. AA4]
          Length = 329

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 68/201 (33%), Gaps = 18/201 (8%)

Query: 24  ASILGDIKKRGFLKCGINT---GLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79
           A +      RG L  G+     G    A V A+     G + D  R +++ +  +P    
Sbjct: 60  AQLPKKFLDRGKLTIGVGALPSGFPPLAYVGADQRTLTGAEPDLGRLVAAVLGLEPDV-- 117

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
               + +  F+ LQS Q D    N   T  R    G  F      D  GF  ++    + 
Sbjct: 118 -QNASWQNLFVRLQSGQFDAGFSNITVTEQR-KQQGFDFAA-YREDNLGFETNRASAWNF 174

Query: 140 VSQ---LSGASICVQAGTTTELTLADYFK---AHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 L+G ++ V +GT  E  L ++ +   A   K     F        A  + R DA
Sbjct: 175 AGDYEVLAGKTVAVDSGTNQEKILREWQRKLTAEGKKLDVRNFADKNSTYLALASGRIDA 234

Query: 194 YTGDISALY---ALKLTNDRP 211
           Y      +    A       P
Sbjct: 235 YFAPNPGIAYHVAQTAKTPNP 255


>gi|228940612|ref|ZP_04103178.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228973532|ref|ZP_04134116.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228980090|ref|ZP_04140406.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis Bt407]
 gi|228779676|gb|EEM27927.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis Bt407]
 gi|228786227|gb|EEM34222.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228819118|gb|EEM65177.1| Extracellular solute-binding protein family 3 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326941245|gb|AEA17141.1| arginine-binding protein [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 263

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 14/231 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           ++    S + + +    +     +K G + G   F   +     KGFD +   A +    
Sbjct: 18  VLSACGSNTASETTNEKV-----VKVGTSAGRSPFIFKEGE-KVKGFDAEIIEAAAKKAG 71

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +++   + +  F  L S +ID ++     +  R+      F     + G  F + 
Sbjct: 72  YK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSIPYVYSGSVFAVK 126

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I S+  L G ++ V  GT  E  L    K +         E   E        R 
Sbjct: 127 KDNHTIKSLEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTFSEEPTAE-LNEVGLGRV 185

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           DAY  D   +          +  +    +     +A    +   +  +I  
Sbjct: 186 DAYYNDKVQVETTITKAKLDNVKIGFGPLEWGE-IAFPFAKKSEKLEDINK 235


>gi|253699931|ref|YP_003021120.1| histidine kinase [Geobacter sp. M21]
 gi|251774781|gb|ACT17362.1| histidine kinase [Geobacter sp. M21]
          Length = 596

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 76/203 (37%), Gaps = 15/203 (7%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             ++ L L  L   S    A     ++    +  G +     +  +  +G   G++VD  
Sbjct: 25  LVIAQLLLWALLVVSICGAAESAAGVRP---VIVGGDRDYPPYEFIDKSGHPAGYNVDLT 81

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA++  +     K+++          ALQS ++D+L +   ++L R  S  + F      
Sbjct: 82  RAIADVMG---MKVEFRLGGWAGMRSALQSGKVDVL-QGMSYSLER--SSEVDFSVPHTV 135

Query: 125 DGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                   K+   ++S++ L G ++ V  G      + DY     +     + E   +  
Sbjct: 136 VNHAVFARKESPYLASLTGLKGKTVAVHRG----GIMHDYLVRQGVGAKLTLTETPADAL 191

Query: 184 AAYRAHRCD-AYTGDISALYALK 205
               + R + A    +  +Y ++
Sbjct: 192 RMVASGRTEFAVVAIVPGMYMIR 214


>gi|146318680|ref|YP_001198392.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|145689486|gb|ABP89992.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
          Length = 163

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 51/158 (32%), Gaps = 13/158 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++ +FF            IK    +    +     F    ++  +KG D
Sbjct: 3   MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++       ++             A+Q+   D L   T  T  R+      F  
Sbjct: 55  VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
             +         K   ISS   L G ++ V+ GT  + 
Sbjct: 110 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQT 147


>gi|92115833|ref|YP_575562.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14]
 gi|91798727|gb|ABE61102.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 306

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 65/219 (29%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F     +G+  GF+VD  RAL   I              +    AL S
Sbjct: 76  VIRFLTETDYPPFNFTGPDGNPAGFNVDLARALCEEI---KITCTIQMRRFETLVDALTS 132

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQA 152
            + D +  +   T   E+   + F    Y     F+              L G  + V A
Sbjct: 133 NRGDAIIASLAVTP--ELRKRVDFTDPYYRTPARFVSRRDAVMAEVRPEYLEGKKVGVIA 190

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E  L  +F           +   E +  A R    D   GD  +L       D   
Sbjct: 191 GSAHEAYLKVFF----TDAELHTYPNDEALRQALRRGEVDFIFGDAISLAFWINGTDSEG 246

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +  A+ +G+      ++W  +
Sbjct: 247 CCAFSGGPFVESRYFGEGVGIAVKKGNDVLRQALNWALF 285


>gi|255524918|ref|ZP_05391866.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|255511396|gb|EET87688.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
          Length = 242

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 16/223 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             K G +     F+    +G    GFD+DF + L   +       +   ++      ++ 
Sbjct: 5   TFKIGTSGTYAPFSYYDKDGKTLIGFDMDFLKELQKILGFKIEGDKLQAMDYSPLTTSVA 64

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-----GASI 148
             ++D +      T  R+  +   F    Y  G   + +K      ++ +         +
Sbjct: 65  EGKLDFVVAALCATDKRKKVM--NFTDTYYNAGLTVVTNKNTSPKEITGIDSIKSGKYKV 122

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            V+ GT + L LA    A+  + +  + + +     A    + DA   D         T 
Sbjct: 123 AVEKGTASNLYLA---AANVPQNNLQIHDSITTALQALEDGKVDAVIHDAPGTAYYISTK 179

Query: 209 DRPSEHVILP-DIISKSPLAPAI----IQGDTEWYNIVSWTHY 246
                 ++       +S  A A+     + + +  +I++    
Sbjct: 180 KDTKLQMVGKWFAQDQSQYAVAVSFKAAKSNPQLMSILNAAVK 222


>gi|115522763|ref|YP_779674.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           BisA53]
 gi|115516710|gb|ABJ04694.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris BisA53]
          Length = 307

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 63/219 (28%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F     +G+  GF+VD  R L   I              +    A+ S
Sbjct: 77  VIRFLTETDYPPFNFTGPDGNPAGFNVDLARLLCEEI---KVTCTVQMRRFETLLDAIAS 133

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152
            + D +  +   T        L F    Y     F+  K   +       L G  +   +
Sbjct: 134 NRGDAIIASLAVTPQ--TRARLDFTDPYYRAPARFVARKDAVLAEVRPEYLEGKKVGAIS 191

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G++ E  L   F           +   + + A  R    D   GD  +L       D  +
Sbjct: 192 GSSHEAYLKAMF----TDAELRPYANDDALRAGLRRGEVDFIFGDAISLAFWINGTDSEA 247

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +   + +G+      ++W  +
Sbjct: 248 CCAFSGGPFVESRYFGEGIGIGVRKGNDLLRQSLNWALF 286


>gi|256375909|ref|YP_003099569.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255920212|gb|ACU35723.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 312

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 14/237 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           +  AS+  ++   G LK G N          A+G    G +VD  +A+   +  +   + 
Sbjct: 55  ALAASLPPEVTSAGKLKVGSNIQSPPNNFYAADGKTPVGSEVDLIKAVGKRLGVE---VA 111

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--I 137
           +  +       +LQ+ ++D+     + T  R     ++F    +  G   ++ K     I
Sbjct: 112 HEDMAFGSLITSLQAGRVDLTMAAMNDTEAR--QEQISFVD-YFTSGITIMVQKGNPTGI 168

Query: 138 SSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                L G S+ V  GT+ E    +       +          +   +     R  R  A
Sbjct: 169 KGPDDLCGKSVAVALGTSQEAFAKEQSGKCASSGKEAVTVTATDSDTQNQNQLRTGRVAA 228

Query: 194 YTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              D+     +  T  +      +    I+  P    + +   +    +     +++
Sbjct: 229 IVNDLPTAVYVSKTAGKGEYFEAVDYAPINGGPYGIGVRKDAGQLATALQGAVQSLI 285


>gi|148252371|ref|YP_001236956.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bradyrhizobium sp. BTAi1]
 gi|146404544|gb|ABQ33050.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 302

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 60/219 (27%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F     +G+  GF+VD  RA+   I              +    AL S
Sbjct: 72  VIRFLTETDYPPFNFTGPDGNPAGFNVDLARAICDEI---KVTCTVQMRRFETLLDALSS 128

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQA 152
            + D +  +   T        L F    Y     F+              L G  I   A
Sbjct: 129 NRGDAIIASMAVTPQMRA--RLDFSDPYYRAPARFVSRRDAVMTEIRPEFLEGKKIGAIA 186

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  L   F           +   E +  A R    D   GD  +L       D   
Sbjct: 187 GTAHEAYLKAMF----TDAEIKTYPNDEALRQALRRAEVDLIFGDGISLAFWVNGTDSAD 242

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +   + +G+      ++W  +
Sbjct: 243 CCAFSGGPFVESRYFGEGVGIGVRKGNDLLRQALNWALF 281


>gi|229012721|ref|ZP_04169891.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           DSM 2048]
 gi|229134352|ref|ZP_04263165.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST196]
 gi|228648973|gb|EEL04995.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST196]
 gi|228748556|gb|EEL98411.1| Extracellular solute-binding protein family 3 [Bacillus mycoides
           DSM 2048]
          Length = 261

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 72/231 (31%), Gaps = 14/231 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
            +    S + +      +     +K G + G   F   +     KGFD +   A +    
Sbjct: 18  ALSACGSNAASKKTDEKV-----VKVGTSAGRSPFIFKEGE-KVKGFDAEIIEAAAKKAG 71

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +++   + +  F  L S +ID ++     +  R+      F     + G  F + 
Sbjct: 72  YK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSIPYVYSGSVFAVK 126

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I S+  L G ++ V  GT  E  L    K +         +   E        R 
Sbjct: 127 KNNNTIKSLEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTYSEDPTAE-LNEVGFGRV 185

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           DAY  D   +          +  V    +     +A    +   +  +I  
Sbjct: 186 DAYYNDKVQVETTITKAKLDNVKVGFGPLEWGE-IAFPFAKKSEKLEDINK 235


>gi|285019733|ref|YP_003377444.1| cyclohexadienyl dehydratase precursor [includes: prephenate
           dehydratase; arogenate dehydratase] protein [Xanthomonas
           albilineans GPE PC73]
 gi|283474951|emb|CBA17450.1| probable cyclohexadienyl dehydratase precursor [includes:
           prephenate dehydratase; arogenate dehydratase] protein
           [Xanthomonas albilineans]
          Length = 271

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 12/257 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     +L  ++          S L  I   G L+         ++ ++A+G ++G D
Sbjct: 1   MTRGLAAGLLATVLAL--PLHAAPSHLDTIVHNGALRVCTTGDYAPYSLLRADGGYEGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +   ++L++++      +Q++P         L + + DI       +L R+   G +   
Sbjct: 59  IALAQSLAASL---DVPVQWVPTRWPMLLPDLLADRCDIAVGGISVSLPRQRQAGFSAVL 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFER 178
                        +    +V+Q+    + V      T E                I+ + 
Sbjct: 116 EVDGKIPLLRCIDRDRYRTVAQIDHPEVRVIEPRGGTNEAFAHRVLP----HAQLILSDD 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              I    R    D    D S     +              +      A  + + D  W 
Sbjct: 172 NPAIFNELREGHADVMITDASEARFQQRRTPGLCAVNPQQPLQYGE-KAFLLPRDDVAWK 230

Query: 239 NIVSWTHYAMVTAEELG 255
             V    +    +    
Sbjct: 231 AYVDQWLHLSKASGAYA 247


>gi|313617525|gb|EFR89870.1| L-cystine-binding protein TcyK [Listeria innocua FSL S4-378]
          Length = 269

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 76/220 (34%), Gaps = 5/220 (2%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           KK   +  G  T       +  NG   G+DV+  + +   +       ++  ++     +
Sbjct: 32  KKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKF--KFKTMDFSNLLV 89

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           +L + ++DI++   + +  RE            F  Q  ++     I+    L+G  +  
Sbjct: 90  SLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINGTKDLAGKRVIT 149

Query: 151 QAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            A +   L L    +     +      +   +     +  R DA     +          
Sbjct: 150 SATSNGALVLKKINEEQGNNFEIAYEGQGSNDAANQLKTGRADATIS--TPFAVDFQNKT 207

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            P +  ++ D++S + +   + + +T+    V     +++
Sbjct: 208 SPIKEKVVGDVLSNAKVYFMLGKNETKLSKDVDKALQSII 247


>gi|229061105|ref|ZP_04198456.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH603]
 gi|228718188|gb|EEL69826.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           AH603]
          Length = 263

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 72/231 (31%), Gaps = 14/231 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
            +    S + +      +     +K G + G   F   +     KGFD +   A +    
Sbjct: 18  ALSACGSNAASKKTDEKV-----VKVGTSAGRSPFIFKEGE-KVKGFDAEIIEAAAKKAG 71

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +++   + +  F  L S +ID ++     +  R+      F     + G  F + 
Sbjct: 72  YK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSIPYVYSGSVFAVK 126

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I S+  L G ++ V  GT  E  L    K +         +   E        R 
Sbjct: 127 KNNNTIKSLEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTYSEDPTAE-LNEVGFGRV 185

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           DAY  D   +          +  V    +     +A    +   +  +I  
Sbjct: 186 DAYYNDKVQVETTITKAKLDNVKVGFGPLEWGE-IAFPFAKKSEKLEDINK 235


>gi|163941153|ref|YP_001646037.1| extracellular solute-binding protein [Bacillus weihenstephanensis
           KBAB4]
 gi|163863350|gb|ABY44409.1| extracellular solute-binding protein family 3 [Bacillus
           weihenstephanensis KBAB4]
          Length = 263

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 72/231 (31%), Gaps = 14/231 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
            +    S + +      +     +K G + G   F   +     KGFD +   A +    
Sbjct: 18  ALSACGSNAASKKTDEKV-----VKVGTSAGRSPFIFKEGE-KVKGFDAEIIEAAAKKAG 71

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +++   + +  F  L S +ID ++     +  R+      F     + G  F + 
Sbjct: 72  YK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSIPYVYSGSVFAVK 126

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           K    I S+  L G ++ V  GT  E  L    K +         +   E        R 
Sbjct: 127 KNNNTIKSLEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTYSEDPTAE-LNEVGFGRV 185

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           DAY  D   +          +  V    +     +A    +   +  +I  
Sbjct: 186 DAYYNDKVQVETTITKAKLDNVKVGFGPLEWGE-IAFPFAKKSEKLEDINK 235


>gi|315924287|ref|ZP_07920510.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622358|gb|EFV02316.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 281

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 77/259 (29%), Gaps = 24/259 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +     ++L  T+         D      L  G ++  V       N   KGF+
Sbjct: 2   MKKLVIILFAVTLLLGATACGKARQT--DPLADNVLTIGTDSDFVPMEYRDKNKALKGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A++  +        ++       F  +   + D +    + T  RE +  +    
Sbjct: 60  IDLGNAIAQRMGVRAF---WIDTGWNSIFNRMNGGKYDCVMSAINDTTAREQNFAM--TD 114

Query: 121 ITYFDGQGFIMHKKKG--------------ISSVSQLSGASICVQAGTTTELTLADYFKA 166
             +      +  K+                I    +L+G  + +        T+ D  + 
Sbjct: 115 PYFISSIVIVSRKETNEQQADAGGRPAKETIDRAEKLNGRKVGMLKDIKRRDTMTD-LQT 173

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
              K     F    ++  A +  + D    D +   A+      P    I    I++   
Sbjct: 174 RYPKIKIKGFSNSAKLFKALKKKKIDNIVVDEA--VAITYQKKDPEHLAITSAAINQKAF 231

Query: 227 APAIIQGDTEWYNIVSWTH 245
           A A  + ++     +S   
Sbjct: 232 AIACRKDNSALSEKISRAI 250


>gi|294618488|ref|ZP_06698052.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1679]
 gi|291595245|gb|EFF26574.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1679]
          Length = 540

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 80/290 (27%), Gaps = 30/290 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW--- 56
           K+     +    +F      + +   +       + G+  G   F        N      
Sbjct: 13  KNMVSVAVLFAFVFSLFSVGSLANADEKTPSDEFRVGMEAGYAPFNWSQQTDENNALPIQ 72

Query: 57  ------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
                  G+DV   + ++  +      +  +         ALQS +ID +      T  R
Sbjct: 73  GQNSYAGGYDVQIAKKVADGLGKK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAER 129

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAH 167
                + F    Y      ++ K        S++ LSGA I  Q  T     +       
Sbjct: 130 RK--EIDFTDPYYESQLVVVVQKDSKYAKAKSLADLSGAKITAQLNTFHYTVIDQIPDVQ 187

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP- 225
             +      +    +  A  +   D Y  +          N           D    +P 
Sbjct: 188 KQQ----AMDNFSAMRTALASGMIDGYVSERPEGVTATSVNKDLEMLEFSGADGFQTNPE 243

Query: 226 ---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
              ++  + +GD +    V+     +   E   I  + +      T + +
Sbjct: 244 DVQISVGMRKGDPDIQK-VNQILSGISNDERTKIMDQAVKDQPAATDSEE 292


>gi|307731456|ref|YP_003908680.1| Arogenate dehydratase [Burkholderia sp. CCGE1003]
 gi|307585991|gb|ADN59389.1| Arogenate dehydratase [Burkholderia sp. CCGE1003]
          Length = 274

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 73/237 (30%), Gaps = 15/237 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L +I  RG L+         ++  K +G ++G D+D   +L+ ++      I+    N  
Sbjct: 45  LDEILARGTLRACTTGDYKPYSFYKTDGQFEGIDIDMTESLAKSLGVKAEYIKTSWPNLM 104

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS----SVSQ 142
             F+A    + DI       TL R+      F      DG+  I+           +   
Sbjct: 105 NDFVA----RCDIGVGGVSPTLERQK--RAFFTQAYMVDGKTPIVRCDDVDKYQTVTQID 158

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T E     +F   N      V+     I     A + D    D S   
Sbjct: 159 QPATRVIVNPGGTNERFAKQFFSHAN----LTVYPDNVTIFKQILAGKADVMVTDASETL 214

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L+   +     V           A  + +GD  +   V    +      E    + 
Sbjct: 215 -LQQKLNPGLCSVHPDKPFQYGEKAWLLPRGDVAFQQYVDQWLHLARATGEYQAVRD 270


>gi|255264343|ref|ZP_05343685.1| extracellular solute-binding protein family 3 [Thalassiobium sp.
           R2A62]
 gi|255106678|gb|EET49352.1| extracellular solute-binding protein family 3 [Thalassiobium sp.
           R2A62]
          Length = 241

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 67/248 (27%), Gaps = 27/248 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S   L      + + + S          ++ G       +  +   G+  GF+
Sbjct: 1   MMKTLILSTAALAFTAGLAMADSHS---------VVRMGTEGAYPPYNFINDAGEVDGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                 L +         +++          L S   D +      T  R+    + F  
Sbjct: 52  RALGDELCARA---ELTCEWVTNEWDSIIPNLVSGNYDTIIAGMSITDERDEV--IDFSQ 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                                    A I  Q GT     +A+           + F   +
Sbjct: 107 GYTQPDPSVF-----LGMGEVDTMSAVIAAQTGTIQAAYVAE------SGATLVEFATPD 155

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA R    DA   D +  Y   + ++     ++  +++    +     + D E    
Sbjct: 156 ETIAAVRNGEADAVLADSA--YLQPIADENDDLMIVGENVLIGGGVGMGFRESDGELRGK 213

Query: 241 VSWTHYAM 248
                 +M
Sbjct: 214 FDAAIQSM 221


>gi|171780294|ref|ZP_02921198.1| hypothetical protein STRINF_02082 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281642|gb|EDT47077.1| hypothetical protein STRINF_02082 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 279

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 7/176 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +          F+  + +G   G+D++  +A+      D  K+ +        F  L S 
Sbjct: 39  VTFATVGTTAPFSY-EESGKLTGYDIEVAKAVFKD--SDQYKVNFKKTEWSSIFTGLDSG 95

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +  +   N  +T  R       +           ++ K   I+S   ++G S  V  GTT
Sbjct: 96  KYQLGGNNISYTKERSA--KYLYSYPIGSTPSVLVVPKDSDITSYDDIAGHSTQVVQGTT 153

Query: 156 TELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTND 209
           T   L  +   ++ K   + +      ++       + D    D   +  +     
Sbjct: 154 TAAQLEKFNTENDSKPVELNYTNENITQVLTNLNDGKFDFKIFDAPTVNTIIKNQK 209


>gi|206558443|ref|YP_002229203.1| periplasmic cyclohexadienyl dehydratase [Burkholderia cenocepacia
           J2315]
 gi|198034480|emb|CAR50345.1| periplasmic cyclohexadienyl dehydratase [Burkholderia cenocepacia
           J2315]
          Length = 270

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 15/237 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+  RG L+         ++  +A+G ++G D+D   +L+ ++      ++    N  
Sbjct: 41  LDDVLARGALRVCTTGDYKPYSYYRADGRFEGIDIDMAESLAKSLGVKTDYVKTSWSNLT 100

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS----Q 142
             F+A    + DI       TL R+    + F      DG+  I+         +     
Sbjct: 101 NDFVA----KCDIAVGGVSTTLERQK--RVFFTQPYVVDGKTPIVRCADADKYQTVAQID 154

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T E     +F   N      V+     I     A + D    D S   
Sbjct: 155 RPETRVIVNPGGTNERFAKQFFTHAN----LTVYPDNVTIFKQILAGKADVMVTDASETL 210

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L+   +     V           A  + +GD  +   V    +   +  E      
Sbjct: 211 -LQQKLNPGLCSVHPDKPFQFGEKAYMVPRGDVVFQQYVDQWLHLARSTGEYQAISD 266


>gi|119025883|ref|YP_909728.1| solute binding protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765467|dbj|BAF39646.1| solute binding protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 294

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 77/243 (31%), Gaps = 10/243 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G+     G   +   G++ GFD+D  + ++  +     +I +  L+   R  AL  
Sbjct: 40  TIAIGVAADQPGLGYLHG-GEYSGFDIDVAKYVAKTLGYAEKQIVFKQLSPAMRASALTD 98

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQA 152
             +D++  +       +               +  ++       I+    LS  ++C  A
Sbjct: 99  GTVDMVVDSFSMDGTHDG--EADVAGPYLTVREALLVRSDSASEITGTDSLSDKTVCAVA 156

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  +  +    +  N +      +   +   A      DA   D +    L   N    
Sbjct: 157 GSAADDNIR--NRTKNTRTTVAERDTYPQCMTALMIGEADAVAADDAISAGLASNNTGDH 214

Query: 213 EHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
             ++ +PD         A+  G  E    +     AMV          ++ +    T + 
Sbjct: 215 LKIVDVPDTTWS--YGIAVKSGQDELVGQIDAALRAMVKDGSWQKAAADMGKSIGYTPDA 272

Query: 272 DVQ 274
            + 
Sbjct: 273 SMN 275


>gi|324992354|gb|EGC24275.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324996123|gb|EGC28034.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|327460583|gb|EGF06918.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327488940|gb|EGF20737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 521

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 65/231 (28%), Gaps = 21/231 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIF 72
             +  I+   +L+ G+      F       +NG  K         G+DV   + ++  + 
Sbjct: 17  GTVHVIQADDYLRIGMEAAYAPFNWTQDDDSNGAVKIEGTNQYANGYDVQIAKKIAQEMG 76

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            +P  ++    +      AL S +ID++      T  R+  +   F    Y      ++ 
Sbjct: 77  KEPLVVK---TSWNGLIPALTSGKIDMIIAGMSPTAERKKEIA--FSNSYYTSEPVLLVR 131

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K    +S   L          +   + L +                  ++  A  +   D
Sbjct: 132 KDGKYASAKTLEDFKDAKVT-SQQGVYLYNLIDQLPGAKKETAMGDFAQMRQALESGVID 190

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNI 240
            Y  +       +  N                    +A  + + D+     
Sbjct: 191 GYISERPEALTAETANSNFKMIQFEKGFEVGEEDASIAIGMRKDDSRIEQA 241


>gi|161506724|ref|YP_001576674.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|160347713|gb|ABX26387.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
          Length = 537

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 88/300 (29%), Gaps = 32/300 (10%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKK-RGFLKCGINTGLVGFAE-------- 49
           M   F    ++L ++I  F  FS N+      KK    LK G+      +          
Sbjct: 1   MKSRFRWIAALLTILISLFIGFSFNSREAQAAKKDSSVLKIGMEANYPPYNWTQPKKTNG 60

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +      +            AL S +ID++     
Sbjct: 61  AVPIDGSNSYANGYDVQIAKIIGKRLHKK---VVVEKTQWDGLLPALTSGKIDLIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F           I +   K      +S   GA +  Q GT     +  
Sbjct: 118 PTAERRK--AINFSEPYRKSTFVVITNKASKYSNAKKLSDFKGAKLTAQQGTLHYDLIKQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-----PSEHVIL 217
              A               +  +  +   D Y  +     +    N        ++    
Sbjct: 176 LKGAKREP----AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVSLNKMAGF 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                 S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 232 KVDHDDSVTSIGVKKGNTKLLNEVNATLRTISNKKREQLMSQAIKEQPKAGNETKKENWL 291


>gi|119962345|ref|YP_949410.1| ABC transporter, solute binding protein [Arthrobacter aurescens
           TC1]
 gi|119949204|gb|ABM08115.1| putative ABC transporter, solute binding protein [Arthrobacter
           aurescens TC1]
          Length = 330

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 14/199 (7%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
            +  A +   IK  G L      G    +     N    G +VD   A+  ++     ++
Sbjct: 67  SAAAALVPDAIKADGKLTVVTTGGTPPLSTFATDNKTLIGSEVDIAYAVGESLG---LQV 123

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           + LP+   +  L ++S + + +  N   T  R+      F      D  GF       IS
Sbjct: 124 EVLPVAWADWPLGVESGKYEAVLSNVTVTEARKE--KFDFA-TYRNDLLGFYAKTDSDIS 180

Query: 139 S---VSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEE---IDAAYRAHRC 191
           +      ++G  I V +GT  E  L  + + +      P+ F+  ++      A ++ R 
Sbjct: 181 TIKEAKDVAGKRIIVGSGTNQEAILVRWDEENKKNGLKPVEFQYYDDDSASQLALQSGRA 240

Query: 192 DAYTGDISALYALKLTNDR 210
           D   G  ++       + +
Sbjct: 241 DLTFGPNASAAYKAAKDGK 259


>gi|327480951|gb|AEA84261.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 161

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 5/99 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A +L +IK  G L+ G+      F     +G+  GF+VDF  AL+  +        +
Sbjct: 26  AFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALTEELGVRAE---F 82

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            P        AL+SK++D++      +  R       F 
Sbjct: 83  QPTKWDGILAALESKRLDVVINQVTISEER--KQKYDFS 119


>gi|213965227|ref|ZP_03393424.1| ABC-type amino acid transport system, secreted component
           [Corynebacterium amycolatum SK46]
 gi|213952079|gb|EEB63464.1| ABC-type amino acid transport system, secreted component
           [Corynebacterium amycolatum SK46]
          Length = 291

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 15/238 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
              +  D++KR  L+ G N          + G   GFD+D  RA++S +     +++   
Sbjct: 41  AKQVPADLRKREVLRIGTNPTFAPAEFKDSAGSIIGFDIDLMRAMASVL---DLRLEIQE 97

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +      AL +  +D+ +        R  +    F       G  +        SS + 
Sbjct: 98  QDFALILPALSAGAVDVGASGFTSNEERRKT--YDFVD-YLDTGLQWARRPGSDASSDN- 153

Query: 143 LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             G ++ VQ  T  ++        D         + + ++            R DA   D
Sbjct: 154 YCGKTVAVQRNTVADMEDLPVKNQDCLDRGLPPINKLAYQDAGTAATTVVLGRADALAAD 213

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                     ++   E     DI   +P   AI + D+E   ++      ++   +  
Sbjct: 214 SPVSAYAVNRSEGKLEL--AGDIYDGAPFGFAIPK-DSELGPVLQQALQYLIDNGQYK 268


>gi|160938086|ref|ZP_02085443.1| hypothetical protein CLOBOL_02981 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439080|gb|EDP16835.1| hypothetical protein CLOBOL_02981 [Clostridium bolteae ATCC
           BAA-613]
          Length = 317

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 61/228 (26%), Gaps = 34/228 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR--------------------------- 33
           M K   +S+  ++ L      +  +                                   
Sbjct: 36  MKKFMALSMAAIMALTVAGCGSKPAETTAAGTTAAETAANADTTAAESAAEEETSAAASG 95

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                  +T    F      G+  G D+D  +A++     +   +    +       AL+
Sbjct: 96  KKYIINTDTTFAPFEFENEKGEMVGIDLDILQAIAQDQGFEYEVVP---VGFSAAVTALE 152

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D +      T  R       F    Y  G G  +     I+S  QL    +  + G
Sbjct: 153 AGECDGVIAGMSITDER--VQKYDFSEPYYDSGVGMAVLSDSDITSYDQLKDQKVAAKIG 210

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           T          + +      I +E   ++  A  A    A   D   +
Sbjct: 211 TEGCTFAESIAEQYGF--EVIQYESSSDMYQAVIAGEAVACFEDYPVI 256


>gi|144898264|emb|CAM75128.1| extracellular solute-binding protein, family 3 [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 288

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 85/258 (32%), Gaps = 22/258 (8%)

Query: 7   VSILCLIILFFTSF----STNASILGDIKKRGFLKCG-INTGLVGFAEVKANGDWKGFDV 61
           +++L L++L  T+        A  +  I  RG L      + +  F  V A G   G DV
Sbjct: 12  IAVLGLLVLPSTAGYAADPATAPDIARIIARGTLVVAAYKSDMPPFFYVDAAGKPGGIDV 71

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    ++  +    +  +    N  +    + S++ D+       TL R   +   F   
Sbjct: 72  ELATDIAQRLGVKLNYARMAD-NFDDLPHLVASRKADVAISYLSRTLRRAALVR--FTQP 128

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASI----CVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                Q  ++++ K            +     VQ G     +  D+      +     + 
Sbjct: 129 YARLRQTLMVNRTKTAPLFRGGERVEMLNDASVQVGVEDGSSYVDFAAERLPRAQVKPYP 188

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYAL--------KLTNDRPSEHV--ILPDIISKSPLA 227
             E+  AA  A +  A   D    Y+L        +            I+P   ++ P+A
Sbjct: 189 SNEDAIAALLAGQLHAVMVDEGFSYSLTRVQAGVPRYRVRDDWALYVKIVPLTGARDPIA 248

Query: 228 PAIIQGDTEWYNIVSWTH 245
            A+ + D  W   +    
Sbjct: 249 MAVHRDDPNWLAWLDTYI 266


>gi|293604533|ref|ZP_06686938.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292817114|gb|EFF76190.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 251

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 78/247 (31%), Gaps = 21/247 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62
            F   ++ +      +    A           LK G       F  +       +G  VD
Sbjct: 2   KFKTLVVSVFAALSMAAGAQAQT--------VLKVGSTPTGSPFTFLDTKTNSIEGVMVD 53

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +A+      +   +Q  P+       +L SK+IDI+S     T  R     ++F    
Sbjct: 54  IVKAVGKEAGFE---VQIEPMAFSALIGSLTSKRIDIVSAAMFITPQR--QQVVSFSEPV 108

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y  G+G ++ K       S + + G ++ VQ GT     +        +     +++   
Sbjct: 109 YRYGEGLMVLKSDNKEYKSFADMKGMTVGVQVGTAFVEPIQ----KSGVFKEVKLYDNPP 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++     A R      D      +    + P+ +            L  A  + DT   +
Sbjct: 165 DMMRDANAGRIQGGFMDYPIAAYILTQGNYPNLKMAQAYQPTVMGSLGLATRKEDTALLD 224

Query: 240 IVSWTHY 246
            ++    
Sbjct: 225 RINKALT 231


>gi|298502248|ref|YP_003724188.1| amino acid ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|298237843|gb|ADI68974.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 507

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 74/250 (29%), Gaps = 26/250 (10%)

Query: 35  FLKCGINTGLVGFAE-----------VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLP 82
           +L+ G+      F             +     +  G+DV   + ++  +  +P  ++   
Sbjct: 13  YLRIGMEAAYAPFNWTQDDDSNGAVKIDGTNQYANGYDVQIAKKIAKDLGKEPLVVK--- 69

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
              +    AL S +ID++      T  R+    +AF    Y      ++ K     S   
Sbjct: 70  TKWEGLVPALTSGKIDMIIAGMSPTAERK--QEIAFSSSYYTSEPVLLVKKDSAYVSAKS 127

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L   +      +   + L D                  ++  A  A   DAY  +     
Sbjct: 128 LDDFNGAKIT-SQQGVYLYDLIAQIPGAKKETAMGDFAQMRQALEAGVIDAYVSERPEAL 186

Query: 203 ALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
             +  N +     + P   +      +A  + + D     I      A +          
Sbjct: 187 TAEAANSKFKMIQVEPGFKTGEEDTAIAIGLRKNDNRISQI-----NASIETISKDDQVA 241

Query: 260 NINQVSKDTT 269
            ++++ K+  
Sbjct: 242 LMDRMIKEQP 251


>gi|184155644|ref|YP_001843984.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum IFO 3956]
 gi|183226988|dbj|BAG27504.1| amino acid ABC transporter substrate-binding component
           [Lactobacillus fermentum IFO 3956]
          Length = 287

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 72/251 (28%), Gaps = 18/251 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
            K   +S++ L+ +  T+   +         +       +  L   +          G+D
Sbjct: 6   KKLIGLSLVALVGVGLTACGKSQD--QKGADQKTWTVATSGTLYPTSYHDPKTKKLTGYD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  RA++  +      + +   N   +  A+++ +  +   +   +  R+    ++   
Sbjct: 64  IEVIRAVAKGLHKK---VVFKEYNVDGQLTAVKTGKAQMAVNDFAISPERKNQFLMSSPI 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              F+        + GI S + + G         T    LA    A  + Y  +     +
Sbjct: 121 KHSFNSLLVRKDDQSGIHSWADIKGKK-AAGEAGTNYQRLAQQLGAKLVNYDNV---SND 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAIIQGD 234
                 ++ + D    D                   P  + +  +          I + D
Sbjct: 177 VYLKGVQSGKTDLIMNDYYLQKLALAAYPNSGLEIDPDMYFVTNEDGKGE--GIVINKKD 234

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 235 KALQKEVNEEL 245


>gi|293394141|ref|ZP_06638441.1| cyclohexadienyl dehydratase [Serratia odorifera DSM 4582]
 gi|291423119|gb|EFE96348.1| cyclohexadienyl dehydratase [Serratia odorifera DSM 4582]
          Length = 255

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 72/237 (30%), Gaps = 6/237 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             ++  S L  + ++  L+         +  +   G+++G D+   ++L+ ++  +   +
Sbjct: 14  GSASAQSHLDKVSQQKKLEVCTTGDYKPYTFLTQEGNYEGIDIAMAQSLAKSLGAE---V 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +++  + K       + + DI       TL R+      F      DG+  ++       
Sbjct: 71  KWVKTSWKTLMQDFNAGKCDIAMGGISVTLERQK--QAFFADKLDTDGKIPLVRCTDVKK 128

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             +        V+       T   + +AH  K +  +      I       + D    D 
Sbjct: 129 YRTIAQINKPSVRVIEPAGGTNEAFVRAHLPKVNLTLSHDNMAIFQQLVDRKADVMITDA 188

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +    +         +      A  + + D  W   V    +      E  
Sbjct: 189 SEALYQQKRYPKLCAVNPKKPMQYGE-KAYMLPRDDLSWKLYVDQWLHLAKATGEYQ 244


>gi|42782595|ref|NP_979842.1| solute-binding family 3 protein [Bacillus cereus ATCC 10987]
 gi|42738521|gb|AAS42450.1| Bacterial extracellular solute-binding proteins, family 3
           superfamily [Bacillus cereus ATCC 10987]
          Length = 263

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 9/243 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +      +  +           +K G + G   F   +     KGFD
Sbjct: 1   MRKSSLLLTLALTVSVGLLSACGSDTASKKTDEKVVKVGTSAGRSPFIFKEGE-KVKGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A +         +++   + +  F  L S +ID ++     +  R+      F  
Sbjct: 60  AEIIEAAAKKAGYK---VEWSVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSI 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G  F + K    I S+  L G ++ V  GT  E  L    K +         +  
Sbjct: 115 PYVYSGSVFAVKKDNNTIKSIEDLKGKTVGVGLGTAGEQELKAVNKNNAFTIKTFSEDPT 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DAY  D   +       D  +  V    +     +A    +   +  +
Sbjct: 175 AE-LNEVGLGRVDAYYNDKVQVETTIKKADLDNVKVGFGPLKWGE-IAFPFAKKSEKLED 232

Query: 240 IVS 242
           I  
Sbjct: 233 INK 235


>gi|197119295|ref|YP_002139722.1| substrate-binding histidine kinase [Geobacter bemidjiensis Bem]
 gi|197088655|gb|ACH39926.1| periplasmic substrate-binding histidine kinase [Geobacter
           bemidjiensis Bem]
          Length = 598

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 63/173 (36%), Gaps = 12/173 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  +  +G   G++VD  RA++  +     K+++          ALQS
Sbjct: 54  TVIVGGDRDYPPYEFIDKSGHPAGYNVDLTRAIAEVMG---MKVEFRLGGWAGMRSALQS 110

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            Q+D+L      +   E S  + F              K+   ++S++ L G ++ V   
Sbjct: 111 GQVDVLQG---MSYSMERSSEVDFSVPHTVVNHAVFARKESPYLASLTDLKGKTVAVH-- 165

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALK 205
                 + DY     +     + +   +      + R + A    +  +Y ++
Sbjct: 166 --GGGIMHDYLVRQGVGAKLNLTDTPADALRMVASGRAEFAVVAIVPGMYMIR 216


>gi|294629521|ref|ZP_06708081.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces sp. e14]
 gi|292832854|gb|EFF91203.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces sp. e14]
          Length = 282

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 12/246 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S      +L  ++ +G ++ GI    + F  +  +G+  G   +  R +   +   
Sbjct: 18  VATASAENGGDLLDRLRAQGVVRLGIAGE-IPFGYIDRDGELTGEAPELARVVFERLGV- 75

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            +K+Q +P         L S+Q D+++        R     + F    Y     F++ K 
Sbjct: 76  -AKVQPVPTEFGSLIPGLNSQQFDVVAAGMYVNAER--CAQVIFADPDYQMLDSFVVRKG 132

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               +     +         GT     +     A   +   ++         A  A R D
Sbjct: 133 NPKGLHDYRDVVAKKAKFATGTGYAQ-IQHAVAAGYEESDILIVPDQVAGLNAVEAGRAD 191

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
            + G       +   + +         ++   P     A A    +T+  +  +   + +
Sbjct: 192 VFAGTALTTREVVKKSAKAEATEAFAPLVDGKPQVDGGAFAFRPTETKLRDAFNTELHKL 251

Query: 249 VTAEEL 254
             + EL
Sbjct: 252 KKSGEL 257


>gi|206975486|ref|ZP_03236399.1| bacterial extracellular solute-binding protein, family 3 [Bacillus
           cereus H3081.97]
 gi|217960923|ref|YP_002339491.1| bacterial extracellular solute-binding protein, family 3 [Bacillus
           cereus AH187]
 gi|222096981|ref|YP_002531038.1| periplasmic amino acid binding protein [Bacillus cereus Q1]
 gi|229140133|ref|ZP_04268692.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST26]
 gi|206746388|gb|EDZ57782.1| bacterial extracellular solute-binding protein, family 3 [Bacillus
           cereus H3081.97]
 gi|217065779|gb|ACJ80029.1| bacterial extracellular solute-binding protein, family 3 [Bacillus
           cereus AH187]
 gi|221241039|gb|ACM13749.1| periplasmic amino acid binding protein [Bacillus cereus Q1]
 gi|228643345|gb|EEK99617.1| Extracellular solute-binding protein family 3 [Bacillus cereus
           BDRD-ST26]
          Length = 263

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 9/243 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +      +  +           +K G + G   F   +     KGFD
Sbjct: 1   MRKSSLLLTLALTVSVGLLSACGSDTASKKTDEKVVKVGTSAGRSPFIFKEGE-KVKGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A +         +++   + +  F  L S +ID ++     +  R+      F  
Sbjct: 60  AEIIEAAAKKAGYK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSPERKK--KYDFSI 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G  F + K    I S+  L G ++ V  GT  E  L    K +         +  
Sbjct: 115 PYVYSGSVFAVKKDNNTIKSIEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTFSEDPT 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DAY  D   +       D  +  V    +     +A    +   +  +
Sbjct: 175 AE-LNEVGLGRVDAYYNDKVQVETTIKKADLDNVKVGFGPLKWGE-IAFPFAKKSEKLED 232

Query: 240 IVS 242
           I  
Sbjct: 233 INK 235


>gi|312973868|ref|ZP_07788040.1| cystine-binding periplasmic protein [Escherichia coli 1827-70]
 gi|310332463|gb|EFP99698.1| cystine-binding periplasmic protein [Escherichia coli 1827-70]
          Length = 132

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 10/120 (8%)

Query: 1   MY-----KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M      +   +S++ + ++   S  + A   +L  +K+RG L  G+      F+    +
Sbjct: 1   MKLAHLGRQALMSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+V+F + L+  +  +       P        +L SK+ID++      +  R+ +
Sbjct: 61  GKLTGFEVEFAQQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKKN 117


>gi|219847455|ref|YP_002461888.1| extracellular solute-binding protein family 3 protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541714|gb|ACL23452.1| extracellular solute-binding protein family 3 [Chloroflexus
           aggregans DSM 9485]
          Length = 269

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 18/260 (6%)

Query: 6   FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           F  ++ L   +       A         DI+ RG L+  ++ G   FAE +A G+  GFD
Sbjct: 13  FAIVVLLAYAWLAWNVNQAVTPIDPVYADIRARGVLRVAVDVGYRPFAEERA-GELVGFD 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  RA+   +  D   + ++       +  L  +Q D+++         E      F  
Sbjct: 72  IDLGRAIGRELGVD---VVFIRSGFDALYDQLTGQQADLIAAALP--YAPEQGYRARFSR 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   +      I  ++ L    + V  G+  +     +  A       +  + + 
Sbjct: 127 PYFDGGLMLVTPVDSTIGQLADLQDRRLGVVLGSEGDSLARRF--ALQTPVTLVETDEIA 184

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            +    R    DA   D  A        D     + +   +S  P   A+     +  + 
Sbjct: 185 PLVQGLRTGTIDAAILDHVAALGAIAAGD-----LRIAAALSYEPYVLAMPAAAFQLESE 239

Query: 241 VSWTHYAMVTAEELGITQKN 260
           ++     +    EL + Q+ 
Sbjct: 240 INRVLARLEERGELQVLQQR 259


>gi|116334029|ref|YP_795556.1| ABC-type amino acid transport system, periplasmic component
           [Lactobacillus brevis ATCC 367]
 gi|116099376|gb|ABJ64525.1| ABC-type amino acid transport system, periplasmic component
           [Lactobacillus brevis ATCC 367]
          Length = 292

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 73/254 (28%), Gaps = 16/254 (6%)

Query: 2   YKDFFVSI----LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DW 56
            K   + +    +    L     S+  S    +  +  L    +  L   +   +     
Sbjct: 5   KKWLVLGLGLSVILSGALVGCGTSSKTSTNTKVANKKTLIVATSGTLYPTSFHTSKNSKL 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDV+  RA++  +      +Q+  L+   +  A+ S + D+ + +   +  R+    L
Sbjct: 65  TGFDVEVVRAVAKGLHKK---VQFKELSVDGQLTAVNSGKADLAANDFGLSPARKKQYAL 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           +      F+          GI S + + G         T    LA    A  + Y  +  
Sbjct: 122 STVYKHSFNSLVVRDKDDSGIHSWADIKGKK-AAGEAGTGYQRLAQQLGAKLVNYDNV-- 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQ 232
              +      +  + D    D                H    +          +   + +
Sbjct: 179 -SNDVYLKDVKNGKTDLIMNDYYLQKLALKAVPNNGLHIAKNMYFTTSDDGQGVGILMKK 237

Query: 233 GDTEWYNIVSWTHY 246
            +T+    +     
Sbjct: 238 SNTKLKKEIDREIQ 251


>gi|254421714|ref|ZP_05035432.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
 gi|196189203|gb|EDX84167.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
          Length = 256

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 9/232 (3%)

Query: 20  FSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           FS +   L   K+ G+L     +      + +   G   G++ +  R +   +   P   
Sbjct: 13  FSADQQTL--TKQAGYLNIVASDFDARPMSYINEEGYRTGYEPELARIVCDRLNLIPVWH 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
                +         + + D++  N   T  R+    ++F        +  ++ +   ++
Sbjct: 71  NLPMEDFYTSLELATNCEYDVVWFNQAITPERQK--AVSFTQPYGLFDEAVLVRQTSTVA 128

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  QL+   +   A +T    L + F       +P   + + E+ AA RA   DA   D 
Sbjct: 129 SPDQLADQCVGGLADSTNIA-LVEGFPGAQAVPYPGSDQVLPEMLAALRAGEIDALIDDE 187

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             L      +        LP    K+P A  + +      + +  T   ++ 
Sbjct: 188 LVLIVAAEEDTSLRLAFTLPT---KAPFAIGVSKTQPLLLSQLEQTLLELIN 236


>gi|282848844|ref|ZP_06258234.1| conserved domain protein [Veillonella parvula ATCC 17745]
 gi|282581349|gb|EFB86742.1| conserved domain protein [Veillonella parvula ATCC 17745]
          Length = 134

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 12/141 (8%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRA 66
            ++    L     S+N            L  G N   V F         + GFD++  RA
Sbjct: 1   MLVMAASLVGGCGSSNQPT------SNKLVVGTNATFVPFEFKDEKTQDYTGFDIELIRA 54

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   I  D   ++   +       AL +  ID+ +     T  R  S  + F    Y + 
Sbjct: 55  IGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLFSSPYYENA 109

Query: 127 QGFIMHKKKGISSVSQLSGAS 147
              +      ++S+  L G  
Sbjct: 110 LAVVYKDGTAVNSLDDLKGKK 130


>gi|240104308|pdb|3DEL|B Chain B, The Structure Of Ct381, The Arginine Binding Protein From
           The Periplasm Chlamydia Trachomatis
 gi|240104309|pdb|3DEL|C Chain C, The Structure Of Ct381, The Arginine Binding Protein From
           The Periplasm Chlamydia Trachomatis
 gi|240104310|pdb|3DEL|D Chain D, The Structure Of Ct381, The Arginine Binding Protein From
           The Periplasm Chlamydia Trachomatis
 gi|240104311|pdb|3DEL|F Chain F, The Structure Of Ct381, The Arginine Binding Protein From
           The Periplasm Chlamydia Trachomatis
          Length = 242

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 67/234 (28%), Gaps = 15/234 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               G N     F  V   G+  GFD+D  R +S+ +       ++   +     L L+ 
Sbjct: 12  KFIVGTNATYPPFEFVDKRGEVVGFDIDLAREISNKLGKTLDVREF---SFDALILNLKQ 68

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID +      T  R   + +             ++ K +    +      S+ VQ GT
Sbjct: 69  HRIDAVITGMSITPSRLKEILMI-PYYGEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGT 127

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSE 213
             E  L         + H   F+   E+       +      + S    +        + 
Sbjct: 128 YQEAYLQSL-----SEVHIRSFDSTLEVLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTA 182

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM----VTAE-ELGITQKNIN 262
            + LP+          +          +      +    V AE E      N+ 
Sbjct: 183 TIDLPEDQWVLGYGIGVASDRPALALKIEAAVQEIRKEGVLAELEQKWGLNNLE 236


>gi|295397743|ref|ZP_06807814.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Aerococcus viridans ATCC 11563]
 gi|294974029|gb|EFG49785.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Aerococcus viridans ATCC 11563]
          Length = 276

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 82/272 (30%), Gaps = 10/272 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIK--KRGFLKCGINTGLVGFAEVKANGDWKGF 59
            K F ++ +    L     S  A+            +  G       F  +  N D +G+
Sbjct: 10  KKQFLITGIASAFLLAACGSAEATDEEATANPDAETIIVGTGNAYQPFVYLDENEDLQGY 69

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-EISLGLAF 118
           D++  RA+   +  D    +Y  ++ K    +L + ++ + + N  +   R    L    
Sbjct: 70  DIEVLRAVDEKL--DQYDFEYESMDFKNILTSLSADKVQLAAHNYAYNDERGAKYLYGEE 127

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y           +   S+  L G  +     +     L  Y   ++     +  E 
Sbjct: 128 AYNNYAHHIVADESTGQVYQSLDDLKGKKVFASPASEVANILETYNAENDDTIEIVYSEV 187

Query: 179 VEE-IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             E + +  +    DA         A K             + +  + +     QGD   
Sbjct: 188 NGELLVSGLQNGTADAAILTK--FDADKYNEQFDINLQASDEALKSAGIYYVFQQGDEAL 245

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
              V      +   EE  ++  +I  +  D T
Sbjct: 246 QTAVDGAIKELR--EEGTLSDLSIEILGADYT 275


>gi|113869153|ref|YP_727642.1| ABC-type transporter, periplasmic component [Ralstonia eutropha
           H16]
 gi|113527929|emb|CAJ94274.1| ABC-type transporter, periplasmic component [Ralstonia eutropha
           H16]
          Length = 273

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 79/249 (31%), Gaps = 19/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKA-NGDW 56
           M     ++++  ++L   +    A            G L+ G  +G    A   A +G++
Sbjct: 9   MRAIRRLAVILALVLAGCAGPRTAPTPDARSALAPTGKLRVGFISGSPIHATKDAASGEF 68

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G  VD  + ++  +      + Y  +       AL +             +  E +  +
Sbjct: 69  RGVAVDLGKEMARRLGVSFEPVAYTSV------PALIAGAKTGEWDVATMGISTERASVV 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            F          +++     I++++ +   G  I V   ++ +  LA   ++       +
Sbjct: 123 DFTAPYMEVEFSYLVPPGSRITTLADVDRPGVRIGVVEKSSPDAYLASTMRSA----TLV 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               + ++  + RA R D   G       +    ++ +   +L           A  +G 
Sbjct: 179 RSSTIADMVESLRAGRTDVIFGTK---AGMYSQAEKLAGSRVLEGRSGGEKAGMATPKGR 235

Query: 235 TEWYNIVSW 243
                    
Sbjct: 236 DYSAAYARK 244


>gi|296534280|ref|ZP_06896758.1| ABC superfamily ATP binding cassette transporter substrate binding
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296265396|gb|EFH11543.1| ABC superfamily ATP binding cassette transporter substrate binding
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 274

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 73/238 (30%), Gaps = 18/238 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80
             A +   I  RG L   I                  GFDV+   A++  +     ++Q+
Sbjct: 19  QAADLPSRIASRGTLIAAIVPNYPPLEMRDPQTNQLTGFDVELGNAIAEKLG---VRMQW 75

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGIS 138
              +  +   ++++ ++DI+         R       F       G  F           
Sbjct: 76  QETSFDQMLASVRTGRVDIILSGMSDLKSR--QETATFID-YLRSGSQFFTQASRAAEFP 132

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHN-----MKYHPIVFERVEEIDAAYRAHRCD- 192
           +   L G  +     T     +  +  A+           +  E   +     R  R D 
Sbjct: 133 NAEALCGKRVGASRRTALPNDIKAFSDANCVAKGRPAIEYVPTEGSADARTQLRQGRIDA 192

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           A  G  +  Y + L    P+ +  +   +  + +  A  + +T+    ++    A++ 
Sbjct: 193 AMQGGETLPYIMGL---EPNTYAPIGQPVRYTLMGIATGKEETQLQQALAGALRALMA 247


>gi|220924260|ref|YP_002499562.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219948867|gb|ACL59259.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 246

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 69/254 (27%), Gaps = 10/254 (3%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           +      +    A  L  IK+ G L+ G+      ++  + +G  KG DV     L+  +
Sbjct: 1   MAAGILAAGPAAARPLAAIKESGTLRVGLTGDYAPYSLKREDGTLKGADVTMAEDLARTL 60

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-- 129
                 +  +P   K     L + + DI       T  R      +   ++         
Sbjct: 61  G---VSLTIVPTTWKSLKDDLLADRYDIAMGGVSVTADRAAVADFSVPVMSDGKRPIVRC 117

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              +              + V  G T E   A +F          V      I       
Sbjct: 118 ADARTYTSIGAIDRPEVRVVVNPGGTNERFAAAHFP----HATVRVHPDNRTIFREVAEG 173

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R D    D + +      +        +PD    +     + + D  +   V     A +
Sbjct: 174 RADLMVTDGAEVDYQSRRHRGVLCPAAVPDSFDHADKGYWMTR-DPAFKAAVDAWLQAAL 232

Query: 250 TAEELGITQKNINQ 263
            +       +   +
Sbjct: 233 KSGAYDKALEAAAE 246


>gi|115358740|ref|YP_775878.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115284028|gb|ABI89544.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 280

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 86/260 (33%), Gaps = 18/260 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F      L+ L F      A+ L  ++  G L  G +     +A ++A G   GFD +
Sbjct: 8   RRFLRG--ALVPLAFVCSLAAAAPLQTVR-PGTLLVGSDLTYPPYAYLEA-GKPAGFDAE 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F R L+  +  +P    +L     +  L +++++ D+++     T   +    + F P  
Sbjct: 64  FARLLARHLKLEP---VFLDTRFPDLILGMKARRFDVVASALYVTP--DRVKQVDFVP-Y 117

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKY-HPIV 175
              G   ++ K       +   L G  +    G +    L     D  KA        + 
Sbjct: 118 LKTGASLLVAKGSAFLPKTPQDLCGKRVGSIKGASWTPKLRAVSQDTCKAAGRGEIAILE 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    E  +A  +   D    D +               +    ++    +   + +GD+
Sbjct: 178 FPTSPEATSALMSKAVDVQIEDAAVAQG-IPKQTNGRVDISSTTLLYPIVIGLGMTKGDS 236

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                +         + E G
Sbjct: 237 GLQGALERALNDAKRSGEYG 256


>gi|315283403|ref|ZP_07871607.1| L-cystine-binding protein TcyK [Listeria marthii FSL S4-120]
 gi|313612952|gb|EFR86890.1| L-cystine-binding protein TcyK [Listeria marthii FSL S4-120]
          Length = 269

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 85/251 (33%), Gaps = 6/251 (2%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +  +++     L  ++           +K   +  G  T       +  NG   G+
Sbjct: 1   MKKKYGILALALTAALALSACGAGNEPEAANEKVQTITVGTGTQFPNVCFLDENGKLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV+  + +   +       ++  ++     ++L + ++DI++   + +  RE        
Sbjct: 61  DVELVKEIDKRLPGYKF--KFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDV 118

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFER 178
               F  Q  ++     I+S   L+G  +   A +   L L    +     +      + 
Sbjct: 119 AYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALILKKINEEQGNNFEIAYEGQG 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA     +             +  ++ D++S + +   + + +T+  
Sbjct: 179 SNDAANQLKTGRADATIS--TPFAVDFQNKTSAIKEKVVGDVLSNAKVYFMLGKNETKLS 236

Query: 239 NIVSWTHYAMV 249
             V     +++
Sbjct: 237 KDVDKALQSII 247


>gi|296129249|ref|YP_003636499.1| extracellular solute-binding protein family 3 [Cellulomonas
           flavigena DSM 20109]
 gi|296021064|gb|ADG74300.1| extracellular solute-binding protein family 3 [Cellulomonas
           flavigena DSM 20109]
          Length = 261

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 15/213 (7%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G L    N     F   + +G+  G D+     +++ +  +   +     +A E   AL
Sbjct: 40  SGTLTVCTNPPYEPFEY-EEDGEIVGLDIALTAEIAADLGVELRPLN-TGFDAIESGAAL 97

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            ++Q DI +     T  RE    + F    +   QG ++     ++    L+G  + VQ 
Sbjct: 98  NARQCDIAASAITITDAREE--NVDFTDAYFDADQGVLVAAGSAVAGEDDLAGLKVGVQQ 155

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            TT    + +           + FE +     A R  + D    D++ L +         
Sbjct: 156 ATTGASWVEE------QGLEGVQFEDLGLQIQALRNGQVDVVVNDVTVLESYV-----DD 204

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           E  +   + +      A+  G+T      + T 
Sbjct: 205 ELEVAFVVETGEQYGFAVRTGNTALLEAANATL 237


>gi|304394039|ref|ZP_07375962.1| putative amino acid-binding periplasmic protein [Ahrensia sp.
           R2A130]
 gi|303293479|gb|EFL87856.1| putative amino acid-binding periplasmic protein [Ahrensia sp.
           R2A130]
          Length = 284

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 86/270 (31%), Gaps = 33/270 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG----------------DIKKRGFLKCGINTGL 44
           M+    + ++ ++ L   + +  A                    D++    ++    T  
Sbjct: 1   MFSRLAILLMTIV-LAAPALAQTAPSDAPRIPNFWDPQDRLIKPDVRALPRMRFLTVTDF 59

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F+ V       GF +D  RA+ + +   P   Q   L   E   AL+  + D L   T
Sbjct: 60  PPFSFVDDQKRLVGFHIDLARAICAELELLPV-CQIQALPFGELEAALRDGKGDALLAGT 118

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLAD 162
             T        L F    +     F+      +       LSG ++ V AGT      A 
Sbjct: 119 AITPA--TRRNLDFSKRYFRLPARFVGRIDTSLQEPLTRALSGKTVAVVAGTAH----AA 172

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-------RPSEHV 215
           + KA   +  P  F  +    AA +A + DA   D  A   L    +       R     
Sbjct: 173 FAKATFDRISPRAFPTLNAAFAALKADQVDAMFADGLATSFLLQREEATAAPCCRFVGGP 232

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            L        LA A+ + +    + V +  
Sbjct: 233 YLSKQYFPGELAVALPKDNRTLRDAVDYAL 262


>gi|145224293|ref|YP_001134971.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK]
 gi|315444626|ref|YP_004077505.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|145216779|gb|ABP46183.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
 gi|315262929|gb|ADT99670.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 236

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 74/220 (33%), Gaps = 10/220 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F  +       G D++   AL+ AI +          +    F  L +
Sbjct: 2   TLRVGVVCPEPPFNSMPGQ---TGLDIEVMTALADAIGEQAEFTDCDCADYDGVFDRLAA 58

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +D +   +  T  RE         +    G      +   + S   LSG +I VQ GT
Sbjct: 59  GDVDCVIAGSTVTPEREGRAAFLPPYLISGQGLAVDTTRLPHVRSADDLSGLTIGVQRGT 118

Query: 155 TTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           T+E  +A+   A        V++        A      CDA      AL  L        
Sbjct: 119 TSER-VAEELVAEGRAERVRVYDYGAIGTAIADLVTGGCDAVMKLAPALAEL---VKDVP 174

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           E  ++   +S   +A A+   D +    +     A + A+
Sbjct: 175 EVDVVQRGLSVEEIAIAVNPSDQQLLARLQVA-QAELEAD 213


>gi|288961244|ref|YP_003451583.1| octopine/nopaline transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288913552|dbj|BAI75039.1| octopine/nopaline transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 283

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 76/276 (27%), Gaps = 42/276 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S L +  +  T     A       K   +          +    A G   G +
Sbjct: 3   MKTLILASTLLIAAVSATVTGAAAQT-----KPTAITIATEGAYEPWNFTTAGGKLDGLE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L + +     K   +  +      AL +++ D +  +   T  R   +G  F  
Sbjct: 58  IDLANDLCARM---SVKCTIVAQDWDGLIPALNARKFDAIMASMIVTEKRLAVIG--FSE 112

Query: 121 ITYFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTT 156
                    ++ K   ++ +                         QL G +I  Q  T+ 
Sbjct: 113 PYAPTAAALMVEKTGPLAKLPGTGTTIDLGGDPAKVSAEIAPIAAQLKGKAIGTQTATSN 172

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L  Y K          ++  E+ D   +A R D      S+L AL        ++ +
Sbjct: 173 TAFLDKYLK---DSVTIREYKTTEQHDLDLQAGRIDGVIAQKSSLTALLTK-PDYKDYTL 228

Query: 217 LPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248
                        +A  + + D     +      A 
Sbjct: 229 AGPTFVGDVFGKGIAVGLRKDDAVLKEMFDKAIQAA 264


>gi|78060566|ref|YP_367141.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77965116|gb|ABB06497.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 262

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 8/167 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G +     +   + +G   G D+D   A+ +A      +  ++ ++       LQS
Sbjct: 29  TLRFGTDPSYPPYEYKQPDGKLAGLDIDIGNAICAAA---NVQCVWVEISFDGLIAGLQS 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           ++ D ++ +   T  R   +   F  P+   D +            V+ LSG  + V  G
Sbjct: 86  RKFDAINASLAPTAARRAVM--DFTQPVYPADIRLVAARGSHLTPDVTSLSGKRVGVLQG 143

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           +T        +  H  +     +   E I A     R DA     SA
Sbjct: 144 STQAAFAKANWAPH--QVLVQEYPDQESIYADLVNGRLDATVVLGSA 188


>gi|154148557|ref|YP_001406894.1| CjaC [Campylobacter hominis ATCC BAA-381]
 gi|153804566|gb|ABS51573.1| CjaC [Campylobacter hominis ATCC BAA-381]
          Length = 259

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 30/225 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F    L  + LF                   +K G++     F+ +  NG   GF+
Sbjct: 1   MKKLFLAFALLCVSLFA----------------ETVKVGMDKEYPPFSYLN-NGVMAGFE 43

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + ++S        I+++P+   + F  ++S  ID+     D T  R       F  
Sbjct: 44  VDLLKEIASQTG---ITIEFVPMIFDDIFNEVESGHIDVGCGAIDITPER--QERFDFSI 98

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   ++       +   S L G  I V    + +  +A            I+   +
Sbjct: 99  PYNRTADIYVTEATNKNLVGPSDLKGKKIGVLTAGSKQEKVARSIP----DAKVIINASL 154

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
             +  + +  R DA   +     A         +     D ++  
Sbjct: 155 ANLLISVKTGRIDACIIESINAPA---VLGNGYDFASSSDKMAMD 196


>gi|288575077|ref|ZP_06393434.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570818|gb|EFC92375.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 520

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 19/248 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCG--INTGLVG-FAEVKANGDWK 57
           M +   V       L   + +  ++ +      G L  G     G    F      G+  
Sbjct: 1   MSRLLSVFCAFFFSLSAVTGAFASNTM----SPGVLTWGGDTEGGAPYMFHHADDIGELV 56

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++V+   A++  +       +++          L+    D+     + T   E S  + 
Sbjct: 57  GYEVEIVEAIAEQMG---LSTRFVQNGWDNLIPGLERHLYDVSIDGLEITP--EHSDVVD 111

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y       + +     +  +     +      +    + D  +          + 
Sbjct: 112 FSIPYYVTHLQIAVRRDNFDITDLESCRGRVVGTLKQSYSQYVLDSLE----GVDVRTYA 167

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       R DA   D     AL           + P+I        A+ +G+ E 
Sbjct: 168 DEINAYTDLVNGRLDATLFDAPI--ALYYGGPMREVKFVGPEIGRIE-YGIAVRKGEEEL 224

Query: 238 YNIVSWTH 245
            + V+   
Sbjct: 225 LSQVNQAI 232


>gi|220909010|ref|YP_002484321.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219865621|gb|ACL45960.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 303

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 81/229 (35%), Gaps = 14/229 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQ 79
             +++  I + G L  G   G++ +A +       G  VD    +   I      P  IQ
Sbjct: 24  AETVIEKITRTGVLSVGTRLGMLPYAYIDDRQQLVGLSVDLTNLIKEEIQQELGRPVTIQ 83

Query: 80  YLPLNAKERF-LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
              ++    +   L    IDI      +T  R     + F       G   ++ +   +S
Sbjct: 84  VQVIDNPNDYFRNLGMGTIDIACSA-QFTWQRAQF--VDFSIPYSISGIRLLLKRDSQLS 140

Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L+G  + V   +  E+      KA   K   +  +  +E  A  ++ +  A  GD
Sbjct: 141 GTVESLAGQRVGVVPNSMGEVV----MKAIQPKAVLVPVQGADEGIADLQSGKIAAIAGD 196

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
              L    L    P+   + P        +A  + + ++ + N+V+   
Sbjct: 197 SLILAGNALKA-NPNGFRLTPTQPYARYGIACIVPENNSTFLNLVNRAI 244


>gi|111022633|ref|YP_705605.1| glutamine transport system permease protein [Rhodococcus jostii
           RHA1]
 gi|110822163|gb|ABG97447.1| probable glutamine transport system permease protein [Rhodococcus
           jostii RHA1]
          Length = 489

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 65/246 (26%), Gaps = 12/246 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
             I  L +L        A          +     +     F     +G   G D+D   A
Sbjct: 19  AVIAALTLLVTLVAPGLAGAQEPAPGNNY-TIATDITFAPFEFQDESGKLVGIDMDLLAA 77

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++          Q   +       A+   Q + +      T  R+ +    F    +  G
Sbjct: 78  IAED---QGFTYQVNAVGFDAALQAVTGGQANGMIAGMSITDARKAT--FDFSDPYFESG 132

Query: 127 QGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
               ++     ++S   L G S+ V+ GT            +        F     +   
Sbjct: 133 VQMGVLESNDSVTSYEDLRGKSVAVKNGTEGATYAESIKDQYGFTTK--YFADSSSMFDE 190

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R     A   D   L        + +    + D +  +    A+ +G          T 
Sbjct: 191 VRTGNSAAVFEDYPVLA---YGIKQGNGFKTVTDKVPGASYGFAVAKGQNAQLLQEFNTG 247

Query: 246 YAMVTA 251
            A + A
Sbjct: 248 LANLKA 253


>gi|296536245|ref|ZP_06898362.1| ABC polar amino acid transporter [Roseomonas cervicalis ATCC 49957]
 gi|296263436|gb|EFH09944.1| ABC polar amino acid transporter [Roseomonas cervicalis ATCC 49957]
          Length = 280

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 65/213 (30%), Gaps = 8/213 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+  ++      A  K +G  +GF+VD    ++  +      I     +      AL + 
Sbjct: 27  LRTAVDGTFAPHAFPKLDGGVQGFNVDLFTEVAKRLG---RPITIDSASFSGLVPALNAG 83

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D L+     T  R  +L      +      G        I S+  + G +I V  G+ 
Sbjct: 84  RYDFLAAPVTVTPERAENLLFTEGYLYTEFQFGI-RRGSAPIRSLEDIRGKTIAVNKGSA 142

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +        A         F+   +   A  A R  A  G  + +         P    
Sbjct: 143 YDAWAQRNAAAMGF--TVQTFDSQPDAVQAVVAGRVYATLGGNTTI--RYAATRTPLLVP 198

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                 +++  A    + + E  N V      M
Sbjct: 199 DFTIKETRAHWAAPFRRDNAELRNQVENVLECM 231


>gi|239982051|ref|ZP_04704575.1| amino acid ABC transporter solute-binding protein [Streptomyces
           albus J1074]
          Length = 259

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 79/238 (33%), Gaps = 12/238 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S L  ++  G ++ GI    V F  +  +G++ G   +  + +   +    + +Q + 
Sbjct: 3   EGSTLERLRSAGTVRLGIAGE-VPFGYIDESGEFTGEAPELAKVIFKRLG--IANVQPVA 59

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSV 140
                    L S+Q D++S        R     + F    Y     FI+ K     + + 
Sbjct: 60  TEFGSLIPGLGSQQFDVVSAGMYINKER--CGQVLFADPEYQMLDAFIVRKGNPKNLRNY 117

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             +  +      G      +    +A   +   ++ +       A  + R D + G    
Sbjct: 118 EDVVKSKAKFATG-AGYAEIGYAMEAGIAERDIVILQDQVAGLNAVESGRVDVFAGTALT 176

Query: 201 LYALKLTNDRPSEHVIL-PDIISKSPL---APAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             ++   + +        P +  K  +     A    DTE  + V+   + M  + EL
Sbjct: 177 TRSVVTKSRKAETTEPFPPKVGGKEKIDGGGFAFRLNDTELRDAVNKELHKMKKSGEL 234


>gi|255505759|ref|ZP_05347988.3| amino acid ABC transporter, amino acid-binding/permease protein
           [Bryantella formatexigens DSM 14469]
 gi|255266081|gb|EET59286.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Bryantella formatexigens DSM 14469]
          Length = 300

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 79/269 (29%), Gaps = 38/269 (14%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54
           M    +      + L +      + NA      +++  LK  +  G   +       +NG
Sbjct: 23  MKNVCRTLLGMTMTLSLAAGMMTAANA------EEKKVLKVAMECGYAPYNWTQSDDSNG 76

Query: 55  DW---------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G+DV   + +   +  D   ++ + L+      A+Q+  +D +     
Sbjct: 77  AVPISGSPDYAYGYDVMMAKHICEELGYD---LEIVKLDWDSLVPAVQAGTVDCVIAGQS 133

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLAD 162
            T  R     + F    Y+     ++           V+ L GA+   Q  T        
Sbjct: 134 ITSER--LQSVDFSEPYYYATIVTLVKSDNAYAEAKGVADLKGATCTSQINTIWYDLCLP 191

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
             +  N+       E V ++  A  +  CD    D     A  +     +          
Sbjct: 192 QIEDANILP---AHESVPQMLVALNSGACDIVVTDQPTGMAACVAYPDFTMLDFAGTDDD 248

Query: 223 KS------PLAPAIIQGDTEWYNIVSWTH 245
                    +  ++ +G+TE    +    
Sbjct: 249 FEVSDEEINIGISMQKGNTELKEAIDSVL 277


>gi|229822722|ref|ZP_04448792.1| hypothetical protein GCWU000282_00010 [Catonella morbi ATCC 51271]
 gi|229787535|gb|EEP23649.1| hypothetical protein GCWU000282_00010 [Catonella morbi ATCC 51271]
          Length = 297

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 17/254 (6%)

Query: 2   YKDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54
            K    + L  +     +              I+K G +    +           V+   
Sbjct: 7   KKIVAAASLITLGGALLAPVHQVQAADESWDRIQKSGKIVVATSGAYYPSTFHSEVEGKD 66

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+D++  R ++  +     ++++  +N      A++S Q DI++ + D T  RE   
Sbjct: 67  VLTGYDIEILRKVAEKL---NLELEFKEMNTDGMLTAIKSGQADIVANDYDITPKREKEF 123

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +      F           GI S+    G     +A T          +A   +    
Sbjct: 124 LFSTPIKYSFGSIVVRESDDSGIKSLDDFKGKKAAGEATTKYMAI----AEAKGAEAVTY 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPL--APAII 231
               +E+  A     R D    D      A+K  N    +       +  +P   A  + 
Sbjct: 180 DNGTLEQYIADIHNGRTDFIPNDYYVQTIAIKNANKLFPDFKTKVGNVFYNPSKAAFVLN 239

Query: 232 QGDTEWYNIVSWTH 245
           +        ++   
Sbjct: 240 KESVTLQEKINQVL 253


>gi|150402678|ref|YP_001329972.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150033708|gb|ABR65821.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 252

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 88/250 (35%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  LII   +  +    I  + +    L  G    L  +   + NG+ +GF+
Sbjct: 1   MK-----SLYILIITLLSPLANVVDIEDEYQITDILSVGAYPDLPPYTY-EENGELRGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  +   P  I Y   N  E + A+++K+ID    +     L   +  + +  
Sbjct: 55  IDLINEIAKRMELTPEFIVYNHTN--EPYEAVKNKKIDCAISS---NFLSPKNDDIEYSR 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +  +  K +    +  L    I V   +  E       ++  M +  + ++ +E
Sbjct: 110 TYLSTYEVIMCEKSQKYFRLEDLKDKKIGVLKNSEAEEKAKYLLRS--MNFEIVTYDNLE 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +I+    +   DA   D   L  +     + ++ +     +    ++ AI   + E    
Sbjct: 168 DIENDLTSGNIDAAISDKHHLNYI----QKENDSLKFVQELDIKYISIAINSKNPELTEK 223

Query: 241 VSWTHYAMVT 250
           +      M  
Sbjct: 224 IDEILLEMEE 233


>gi|325528184|gb|EGD05367.1| extracellular solute-binding protein [Burkholderia sp. TJI49]
          Length = 256

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 14/184 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI+  L   +          GFD D  + +S A+      ++ + L+  +  LAL+
Sbjct: 65  TLTIGISPALPPISSYATDARTVIGFDADVGQLVSDALGRK---LKIVALSWPDWPLALE 121

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R       F      D  GF +     I S      ++G  I  
Sbjct: 122 SGKVDAVISNVTVTEER--KQKFDFS-TYRKDQLGFYVRNDSKIQSIREPKDVAGLRIVT 178

Query: 151 QAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L  + + +            ++       A ++ R DA     S L     
Sbjct: 179 DAGTNQEKILLAWDRENVAHGLKPVQIQYYDDQAMRIVAVQSGRADAIFSVNSVLAYQSA 238

Query: 207 TNDR 210
              +
Sbjct: 239 QQGK 242


>gi|317054239|ref|YP_004118264.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316952234|gb|ADU71708.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 270

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 84/252 (33%), Gaps = 18/252 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                +  L +L   S +   S+       G L  G     + F  V  +G   GFD+D 
Sbjct: 10  RLRGMMFSLALLPVISHAAVESV-----SPGKLTYGTAATFMPFEFV-KDGKLTGFDIDL 63

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             ALS  +   P+ +    +  K    ALQ K++DI++        R     + F P   
Sbjct: 64  ITALSKHLDLTPAPMA---MEFKGLIPALQGKRLDIINSAMYVNPTRAA--QVDFVPYLK 118

Query: 124 FDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFE 177
              +  +        +     L G +I V  G   E        +   A+    + + F 
Sbjct: 119 IGSRVVVRKGNPAGITGRDMSLCGKNIAVTLGGIEESQARVDNKNCVAANKAAINVLTFP 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +   A    R DA         AL           + P+  + + +A A+ +GD E 
Sbjct: 179 AATDSAVAVAQGRADAEFLSTPGTLALFSEKPD-VFAAVGPEFEADTHIAFAVRKGDAET 237

Query: 238 YNIVSWTHYAMV 249
              +     ++V
Sbjct: 238 KAQLEKGLQSLV 249


>gi|148253607|ref|YP_001238192.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146405780|gb|ABQ34286.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 273

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 62/227 (27%), Gaps = 12/227 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            DI++ G L+  +                  GFDV+    L+  +        +   +  
Sbjct: 28  ADIRQNG-LRIAVVPNYPPMEFKDPATATLTGFDVELGEVLAKKLGVKA---VWQETSFD 83

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSG 145
           +    L +++ D++         R       F        + F+   +       + L G
Sbjct: 84  QLMPGLATQRFDVILTGMTDYKSR--QETATFIDYLRSGPRFFVQAARAAEFKEPAALCG 141

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDISALYA 203
             +     T     +A + + +        +  E   +     +  R DA       L  
Sbjct: 142 KKVGASRRTMFPKDIAAWSEKNCGTSPIAFVGTEGSADARTQLKQGRIDAAVQGNETLPY 201

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +         +V +   I+      A      E    +     AM+ 
Sbjct: 202 IMDLEPN--TYVPVGTPIALQYTGLATPVKAEELREALRGALEAMIA 246


>gi|256545654|ref|ZP_05473011.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398630|gb|EEU12250.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Anaerococcus vaginalis
           ATCC 51170]
          Length = 520

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 65/225 (28%), Gaps = 30/225 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K     +  ++   FT   ++A            K G+      F             
Sbjct: 1   MKKILKFLMAFVLTFVFTMGISHAD-------EDTFKVGMEVNYAPFNFSQVNDANGAVE 53

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              + G++  G+DV   + ++  +      ++   +       AL S +ID +      T
Sbjct: 54  IKNSKGEFANGYDVQIAKKIADELGKK---LEIYKIEWDGLPPALTSGKIDAIIAGMSPT 110

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC--VQAGTTTELTLADYFK 165
             R     + F    Y      ++ K    +    ++            T   T+ D   
Sbjct: 111 AERRK--EIDFTNSYYISDLVIVLKKDSSFAKAKSIANFKDAKITGQLNTFHYTVLDQID 168

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             N +      E    + +A +A   D Y  +     +    N+ 
Sbjct: 169 GVNKQA---AMESFPSMISATKAGNIDGYVSEKPGAMSAISANED 210


>gi|228478239|ref|ZP_04062847.1| amino acid ABC transporter substrate binding protein [Streptococcus
           salivarius SK126]
 gi|228249918|gb|EEK09188.1| amino acid ABC transporter substrate binding protein [Streptococcus
           salivarius SK126]
          Length = 283

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 83/265 (31%), Gaps = 21/265 (7%)

Query: 1   MY--KDFFVSILCLI---ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M   K     +L L    +L      ++A+     +K+  +          F   + +G 
Sbjct: 1   MKLQKKVLFGLLGLAVTGLLVACGNHSSATKAEKAQKQTTVIAATGGNPKPFTF-EEDGK 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G +++  +A+   +     K++   +     F  L S +  I   N      RE +  
Sbjct: 60  LTGHNIELLKAVFDKL--PQYKLKITKVEFPSMFSGLSSGRYQIAVNNLAKNEEREKNYQ 117

Query: 116 LAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             F    + +    I  K        S+ + L G S    AG  +   + +Y K++  K 
Sbjct: 118 --FSDPIFKNSYVVIFKKGNSKAKEASTWTDLEGLSTVGSAGVNSTTAIEEYNKSNPDKE 175

Query: 172 HPIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTND----RPSEHVILPDIISKSP 225
             + +   +         + + D    D       +   D           L   +   P
Sbjct: 176 IALNYSSEDLKSQLQGVESGKYDFLVMDKPMFDYYQKEYDLDLVGKDISGSLSTDLMAEP 235

Query: 226 LAP-AIIQGDTEWYNIVSWTHYAMV 249
            +   + + +T+    V+     ++
Sbjct: 236 YSYFVLGKEETQLTKDVNKALKEVI 260


>gi|257878816|ref|ZP_05658469.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257881454|ref|ZP_05661107.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257885725|ref|ZP_05665378.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257890675|ref|ZP_05670328.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260558382|ref|ZP_05830578.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207089|ref|ZP_05921778.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|257813044|gb|EEV41802.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257817112|gb|EEV44440.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257821581|gb|EEV48711.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257827035|gb|EEV53661.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260075556|gb|EEW63862.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078717|gb|EEW66419.1| amino acid ABC transporter [Enterococcus faecium TC 6]
          Length = 526

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 82/286 (28%), Gaps = 31/286 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW------- 56
           V++L   +    S  + A+   +       + G+  G   F        N          
Sbjct: 4   VAVLFAFVFSLFSVGSLANA-DEKTPSDEFRVGMEAGYAPFNWSQQTDENNALPIQGQNS 62

Query: 57  --KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+DV   + ++  +      +  +         ALQS +ID +      T  R    
Sbjct: 63  YAGGYDVQIAKKVADGLGKK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERRK-- 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            + F    Y      ++ K        S++ LSGA I  Q  T     +         + 
Sbjct: 118 EIDFTDPYYESQLVVVVQKDSKYAKAKSLADLSGAKITAQLNTFHYTVIDQIPDVQKQQ- 176

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP----L 226
                +    +  A  +   D Y  +          N           D    +P    +
Sbjct: 177 ---AMDNFSAMRTALASGMIDGYVSERPEGVTATSVNKDLEMLEFSGADGFQTNPEDVQI 233

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           +  + +GD +    V+     +   E   I  + +      T + +
Sbjct: 234 SVGMRKGDPDIQK-VNQILSGISNDERTKIMDQAVKDQPAATDSEE 278


>gi|315093425|gb|EFT65401.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL060PA1]
          Length = 324

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 72/233 (30%), Gaps = 16/233 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  DI++ G L+ G          +  +G    GFDVD+ +A+   +     ++   
Sbjct: 74  AAMVPDDIRESGTLRNGTAANYAPAEFIDTDGSTVVGFDVDYVKAIGKLMG---LQVTTT 130

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SV 140
                    A+ S + D+ + +   T  R+  + L      +  G    + K      S 
Sbjct: 131 NSAFPSLIPAIGS-KYDLSASSFTITPERQNQVTLT---SYFKAGYSMAVPKGNPKRISP 186

Query: 141 SQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             L G S+ VQ GT  +           +A       + +E   +        + D    
Sbjct: 187 DDLCGHSVAVQTGTAQQTAAQQKSKKCTEAGKKPIDLLSYESQSDATTNVAGGKADVLYA 246

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           D            +      L +I   S    A  + D      +      ++
Sbjct: 247 DSVITGYAIKQTSK---LEALGNITDASMFGVATAKNDGGLSKAIQAATQKLI 296


>gi|220917276|ref|YP_002492580.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955130|gb|ACL65514.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 599

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     +  +   G   GF+VD  RA++  +     ++++      +   AL++ 
Sbjct: 56  VIVGGDQSYPPYEFLDQQGRPAGFNVDLTRAVARTVG---LEVEFRLGRWADMRRALETG 112

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           +ID L +   ++  R     + F P +          +    + S++ L+G  + V    
Sbjct: 113 EIDAL-QGMSFSEQRAK--EVDFTPPSLIVHHAIFARRGDRPVRSLADLAGKEVLVLRS- 168

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSE 213
                + D  +  +     +  +   ++     A + D A    +  LY ++      S 
Sbjct: 169 ---GIMHDTLRREHPDVKVVPADTHADVLRQLAAGKHDYAVMAKLPGLYLVREM--GLSN 223

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +    +      A+ +G+      ++     +    E  
Sbjct: 224 LTAMDQPAAVERYGYAVRRGNEALAARLAEGLAIVRNTGEYQ 265


>gi|269962551|ref|ZP_06176899.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832746|gb|EEZ86857.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 489

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 111/330 (33%), Gaps = 23/330 (6%)

Query: 4   DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
             +  +L L+     +              L  IK++  L+  ++  L GF  +   G+ 
Sbjct: 9   KLWTGLLILLSASSFALELSPLRQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGEP 66

Query: 57  KGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           KG   +        +        IQ +P++  E   +L+    D++  N   T  R+  +
Sbjct: 67  KGIGAELLAHFERDLRKLKPKINIQIIPVSRDELLPSLEQGLGDLVVANLTITDARKKLV 126

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKY 171
             +   IT  +       K   ++ + QLSG  I V+A ++   +   L        +  
Sbjct: 127 DFSDPAITGIEEWVITNKKTPVMTKLDQLSGKEIWVRASSSYFESIQALNKQLNKKGLPP 186

Query: 172 HPIVFERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             + F        E+          A   D           D    H  +P       +A
Sbjct: 187 VVVHFIEETLQDYELVGMLNNGYVKAIVLDSHKAKLWMSFMDDIRAHTKIPIRKGGE-IA 245

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
            A+     E   +V+       +   LG  I  K I+  +      + ++   ++K S +
Sbjct: 246 WAMRHDSPELMKVVNKFIRTAKSGTLLGNVIYGKYIDNTNWLNKALNPKKIAQLEKLSAL 305

Query: 286 GEALGLTKDWTYRIIRHMGNYGEM-FDRNL 314
               G   D+ Y +I  +  Y E  FD NL
Sbjct: 306 FSKYGEKYDFDYLLIAAVA-YQESGFDNNL 334


>gi|163804163|ref|ZP_02197928.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio sp. AND4]
 gi|159172017|gb|EDP56996.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Vibrio sp. AND4]
          Length = 150

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 48/154 (31%), Gaps = 7/154 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      L + +L  T  +   S L  +  +G L+ G                 ++GF
Sbjct: 1   MKKPLL--ALGMCLLAITQVAHANSRLQQVLDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D    L+  +      ++++  + K     + + + D ++ +    + R    G +  
Sbjct: 59  DIDVTTELAKDLGVK---VEFVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQA 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
                             +  +      + V A 
Sbjct: 115 YFYLGFVPVVQKKDLANFTDWADFDKPDVKVAAT 148


>gi|322373588|ref|ZP_08048124.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C150]
 gi|321278630|gb|EFX55699.1| polar amino acid uptake (PAAT) family ABC transporter, amino
           acid-binding protein [Streptococcus sp. C150]
          Length = 285

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 13/177 (7%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDW 56
           M K    + IL L +L   +    +      K  G    +    ++    F   K + D+
Sbjct: 10  MKKWLAGLGILGLSVLTLAACGNKSDG----KASGEKQTITVATDSDTAPFTFKKGD-DF 64

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KG+D+D  +A+      D  +++++          + S +  I + + ++   RE   G 
Sbjct: 65  KGYDIDLVKAIFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEEREQKYG- 121

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            F              +    +S+  LSG +  V  G+     L ++  A+  K   
Sbjct: 122 -FSDPISRSNYAITSAEGTKYTSLDDLSGKTTEVLPGSNYAQLLENWNHANEDKKPI 177


>gi|282601296|ref|ZP_06257980.1| glutamine ABC transporter, permease/substrate-binding protein
           [Subdoligranulum variabile DSM 15176]
 gi|282569528|gb|EFB75063.1| glutamine ABC transporter, permease/substrate-binding protein
           [Subdoligranulum variabile DSM 15176]
          Length = 278

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 65/228 (28%), Gaps = 11/228 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
                          +T    F    ANGD+ G DVD   A++              L  
Sbjct: 47  TAETAGSDKTWVIATDTVFKPFEYTDANGDFVGIDVDIVAAIAEDQGFKYE---LKSLGW 103

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                A Q+ Q D +      T  R+   G  F    Y   Q   +     I+    L G
Sbjct: 104 DSAIAACQAGQADGMIAGASITDERKA-SGWMFSDGYYTATQTMTVAANSDITGFDGLQG 162

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ V+ GT                ++   FE    +  A    +C A   D   +   +
Sbjct: 163 KTVAVKTGTQGAAYAESL--KDQYGFNITYFEDSPTMYQAVLGGQCVACFEDTPIM---Q 217

Query: 206 LTNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            +       + + +  +        AI   D +    +     A + A
Sbjct: 218 ASIKDGGLALKVLEDTANEGGDYGFAIFNADNQELLDMFNAGLADIKA 265


>gi|302539758|ref|ZP_07292100.1| secreted protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302457376|gb|EFL20469.1| secreted protein [Streptomyces himastatinicus ATCC 53653]
          Length = 303

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 70/227 (30%), Gaps = 13/227 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           DI+ +G L   +       + +  +     G + D  RA++  +     ++  +  N   
Sbjct: 55  DIRDQGSLTSAVGNDYPPLSLLDLDNKTVIGAEPDLIRAVAQTLG---LRVHLVQANFDS 111

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGA 146
               ++S + D+  +       +E    + F              K    I S++ L G+
Sbjct: 112 IIGGVRSHRYDVAIQAML--DKKERQSQVTFVDYMKTSSSILASEKAAGNIRSLAGLCGS 169

Query: 147 SICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + V+ GT+    +A   K        +   +VF        A    R DA+ G    + 
Sbjct: 170 QVAVEQGTSQVDDVAAQAKKCAADGKPELESLVFPDSVGCFQALSTGRADAFVGGTPTVD 229

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                +          +     P    I + +      V      ++
Sbjct: 230 YQAEMSH--GRFRTAGEPYRFLPYGILINKEERTLVRAVRGALQKLI 274


>gi|220914866|ref|YP_002490174.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
 gi|219952617|gb|ACL63007.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 281

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 11/213 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                L DI  RG ++ G+      +A    +G  +G ++D  ++++  +      +   
Sbjct: 28  AADGRLKDILDRGVVRVGVQGAFKPWAFPAPDGTLQGIELDLAKSVADTLGVKLEPVII- 86

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
              +  R   LQ  +ID++         R   +G+   P  +  G   +  K   I    
Sbjct: 87  --TSANRIQFLQQGKIDLIIGGMYDATDRRKVVGII-EPAYWSSGPTLLAKKG-AIKDWK 142

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            ++   +C + G      +     A+      I F    E     RA +C A+  D  ++
Sbjct: 143 DIANKPVCGKQGNYYNKQVQTELHAN-----LIAFAGNTEGKEGLRAGKCIAWLYDDVSI 197

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            A          + +   ++  +P A A+   +
Sbjct: 198 MADLA-LPEWEGYEMPVPVLYNNPWAAAVPLDE 229


>gi|282854426|ref|ZP_06263763.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes J139]
 gi|282583879|gb|EFB89259.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes J139]
 gi|314922830|gb|EFS86661.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL001PA1]
 gi|314980787|gb|EFT24881.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL110PA3]
 gi|315090240|gb|EFT62216.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL110PA4]
 gi|327327042|gb|EGE68823.1| ABC-type amino acid transport system, secreted component
           [Propionibacterium acnes HL103PA1]
          Length = 324

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 72/233 (30%), Gaps = 16/233 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  DI++ G L+ G          +  +G    GFDVD+ +A+   +     ++   
Sbjct: 74  AAMVPDDIRESGTLRNGTAANYAPAEFIDTDGSTVVGFDVDYVKAIGKLMG---LQVTTT 130

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SV 140
                    A+ S + D+ + +   T  R+  + L      +  G    + K      S 
Sbjct: 131 NSAFPSLIPAIGS-KYDLSASSFTITPERQNQVTLT---SYFKAGYSMAVPKGNPKRISP 186

Query: 141 SQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             L G S+ VQ GT  +           +A       + +E   +        + D    
Sbjct: 187 DDLCGHSVAVQTGTAQQTAAQQKSKKCTEAGKKPIDLLSYESQSDATTNVAGGKADVLYA 246

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           D            +      L +I   S    A  + D      +      ++
Sbjct: 247 DSVITGYAIKQTSK---LEALGNITDASMFGVATAKNDGGLSKAIQAATQKLI 296


>gi|315604137|ref|ZP_07879203.1| amino acid ABC superfamily ATP binding cassette transporter
           solute-binding protein [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313843|gb|EFU61894.1| amino acid ABC superfamily ATP binding cassette transporter
           solute-binding protein [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 315

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           D+K RG L+ G +        +   +   +G+DVD  RAL+  +                
Sbjct: 67  DVKARGTLRNGASADYAPAEFLGDDSQTAQGYDVDITRALAKVMGLSEGTT--THAEFPT 124

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGA 146
              AL + + D+   +   T  RE    L         G  F + K        +   G 
Sbjct: 125 IIPALGT-KFDVGISSFTITSEREQQANL---VSYVEVGSAFGVAKDNPKNFDPTNPCGK 180

Query: 147 SICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           +I +Q GT  E    +       A   K   +  +   +I       + DA      +  
Sbjct: 181 TIGLQTGTAQEDYARELSEKCVAAGQDKITIMPHDLQTDIATKVIGGQYDA--TFADSTV 238

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                +    +   + D+I  +P   AI + D +    V     
Sbjct: 239 IGYTASVSGGQIEQVGDVIESAPQGVAINKDDAQLTAAVQQAMQ 282


>gi|220922367|ref|YP_002497669.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219946974|gb|ACL57366.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 255

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 82/257 (31%), Gaps = 22/257 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61
           K    +    + L     +   +          LK G     + F  +       +G  V
Sbjct: 2   KRLIQAACATLALGLAGPAVAQTT---------LKVGSTPTGIPFTFLDTKTNTIQGVMV 52

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A+          +Q  PL       AL +K+IDI+S     T  R+    + F   
Sbjct: 53  DVITAVGREAG---FAVQVEPLQFSTLIAALTAKKIDIISAAMFITPPRKEV--IDFSEP 107

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y  G+G I+ K       + + L G ++ VQ GT     L    K   +     +++ +
Sbjct: 108 VYTYGEGMIVPKSDTREYVTFADLKGETVGVQVGTAFVEPL----KKSGLFAEVKIYDTI 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238
            +I     A R  A   D   L         P+   V          +   + + D+E  
Sbjct: 164 PDILRDVNAGRLKAGFADGPILAYNLKQGLFPNVRLVESYKPTVVGSVGIGLRKEDSELR 223

Query: 239 NIVSWTHYAMVTAEELG 255
             +      +  + EL 
Sbjct: 224 AKIDAALSRIKQSGELA 240


>gi|158319770|ref|YP_001512277.1| extracellular solute-binding protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158139969|gb|ABW18281.1| extracellular solute-binding protein family 3 [Alkaliphilus
           oremlandii OhILAs]
          Length = 280

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 35/231 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEV---K 51
           M +    ++L + +L     +         K  G          G+      F       
Sbjct: 1   MRRK-ITTLLAISLLSIFVLAACGPT----KTAGGSGGKEKFVVGLEAAYAPFNWTQMDN 55

Query: 52  ANG--------DWKG-FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           ANG        ++ G +DV+  + ++  +  +   +  +  +      AL S  ID +  
Sbjct: 56  ANGAVPIEGTAEYAGGYDVEIAKRVAEGLGRE---LVIVKTDWDGLLPALTSNSIDAIVA 112

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELT 159
               T  R     + F    Y      ++ K        S+    GA I  Q  T+    
Sbjct: 113 GMSPTPER--LEAIDFTDFYYSSDLVMVVRKDGNYTNAESIQDFKGAKITGQLNTSHYRV 170

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +      + +K  P  FE    +  A  +   D Y  +     +    N+ 
Sbjct: 171 IDQI---NGVKQEP-AFESFNVMRVALESGIIDGYVSERPEGISASAANEN 217


>gi|317053122|ref|YP_004119476.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316953449|gb|ADU72920.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 272

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 72/250 (28%), Gaps = 23/250 (9%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCR 65
           ++++   +L   S  + A              G              +G   GFD+DF R
Sbjct: 8   IALVIGGVLAAFSGMSQA---------KEFTVGGYPSYPPIDMRDPVSGKAMGFDIDFAR 58

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L   +      + +      +   +LQ+ ++D        T  R+  +   F       
Sbjct: 59  ELEKEMGVK---VNFSETAFAQLIPSLQTGRLDFFLSAMSDTKERQQHIA--FVDYLQSG 113

Query: 126 GQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPIVFERV 179
            Q   +        S+    G  +     T     L  +  AH       K   +  E  
Sbjct: 114 TQLMALTADPHKGHSLIDYCGKRVAASRSTNIIAQLNAWSDAHCASAGKPKMSVLGAENN 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +     +  R DA   D   +  ++ +         +   I+ S +   + + D     
Sbjct: 174 IDARMQLKQKRVDAMAQDSLTIPYIQQSEQ--GVFTTVDQPINFSYMGIGVAKEDVALQK 231

Query: 240 IVSWTHYAMV 249
            +     AM+
Sbjct: 232 KLQQALQAMI 241


>gi|257387740|ref|YP_003177513.1| extracellular solute-binding protein family 3 [Halomicrobium
           mukohataei DSM 12286]
 gi|257170047|gb|ACV47806.1| extracellular solute-binding protein family 3 [Halomicrobium
           mukohataei DSM 12286]
          Length = 258

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 66/237 (27%), Gaps = 19/237 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V  L          S+  +          +  G N+G   F     +G+  GFD++    
Sbjct: 16  VGALGATTAIAGCSSSEENTE-------TIVPGTNSGFPPFEYT-EDGELVGFDIELAET 67

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +      +    ++  +  +    ++    ID+++         +    + F    +   
Sbjct: 68  VIDRAGYEVG--EWQDIAFESLIPSVLDGDIDLIAAGMTI--GPDRQEQIDFTDPYWESS 123

Query: 127 QGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEID 183
           Q  ++ +       SV  L G  +  Q GTT E       +   + +     ++      
Sbjct: 124 QAVLVQEGGEFQPESVEDLEGVRVGAQGGTTGEGEAEALVEDGLVAEDDLRRYDNYTLAA 183

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                   DA   D         +        I   I +       +   D    ++
Sbjct: 184 QDLENGNVDAVIVDEPV----AGSFAGDRAVAIAFVIDTGEQFGMGMRPDDERLSDL 236


>gi|302875771|ref|YP_003844404.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|307689206|ref|ZP_07631652.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|302578628|gb|ADL52640.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
          Length = 293

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 98/273 (35%), Gaps = 33/273 (12%)

Query: 1   MYK-----DFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINT 42
           M K        ++I+ +  +                  + +   L  IK+R  +   I+ 
Sbjct: 1   MKKCISRRKLILNIIAITFIGIFLIYQPKVFNGKNLPITDSKDRLELIKERKVMNVVISD 60

Query: 43  GLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDIL 100
               F+ +     +  G + D  + ++  +  +  +++   +  ++    L + + ID++
Sbjct: 61  NNYPFSYIDPETNELTGINGDIIKEIARRLGLERVEVK-KIVPFEDLLTELNNNKEIDVM 119

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
           S        R+      F  I Y + +  ++ K   I+    L  A +  Q GT   L L
Sbjct: 120 SDRMYAIEERKKI--ALFTDILYKEWEVVVIPKFSKITVKEDLKNAVVGAQEGTVF-LDL 176

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
           A+ +K   +    +VF+    + +A    + DA   D   +  L   N +    + L  +
Sbjct: 177 ANKWKEQKLIKDVVVFDNQANLMSAINTLKVDAGITDSILVSYLISNNPK----LYLKTL 232

Query: 221 ISKSP-----LAPAIIQGDTEWYNIVSWTHYAM 248
               P     +A A+ + D    N ++     M
Sbjct: 233 YPYEPELPGLIASAVRKNDVSLANAINKEIDGM 265


>gi|166363127|ref|YP_001655400.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
 gi|166085500|dbj|BAG00208.1| extracellular solute-binding protein [Microcystis aeruginosa
           NIES-843]
          Length = 285

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 91/252 (36%), Gaps = 12/252 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++++ L  +F    + + ++L  IK+ G L+  +    + F    +N + +G  +D
Sbjct: 2   KLIILTLVILSNVFAALPAKSETVLEKIKRTGLLEVAMREDAIPFGYRDSNNNLQGLCLD 61

Query: 63  FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F + L   +          ++        RF  L++K +D           + I   ++F
Sbjct: 62  FIQLLRGELKHKLNLRIISVKIYKSTLFNRFQLLENKTVDFECGPNSI--RKNIPNAVSF 119

Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
               +  G  F++    +   +  S L G SI V   T+T+  L   +     +      
Sbjct: 120 SRPFFVTGTQFLVRSDNQNNFNFSSSLEGISIGVLRDTSTQELLRQKYPLATYQ-EFQGV 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILP-DIISKSPLAPAIIQG 233
                   + R +  DA+  D   L      L      ++ ++P + ++       +   
Sbjct: 179 TGRLRGIQSLRRNGIDAFASDGILLIGEAVILGLSLEKDYQLIPRNPLNCDYYGFILPAN 238

Query: 234 DTEWYNIVSWTH 245
           D +W   ++   
Sbjct: 239 DPQWQEFINGVI 250


>gi|314966261|gb|EFT10360.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL082PA2]
          Length = 324

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 72/233 (30%), Gaps = 16/233 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  DI++ G L+ G          +  +G    GFDVD+ +A+   +     ++   
Sbjct: 74  AAMVPDDIRESGTLRNGTAANYAPAEFIDTDGSTVVGFDVDYVKAIGKLMG---LQVTTT 130

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SV 140
                    A+ S + D+ + +   T  R+  + L      +  G    + K      S 
Sbjct: 131 NSAFPSLIPAIGS-KYDLSASSFTITPERQNQVTLT---SYFKAGYSMAVPKGNPKRISP 186

Query: 141 SQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             L G S+ VQ GT  +           +A       + +E   +        + D    
Sbjct: 187 DDLCGHSVAVQTGTAQQTAAQQKSKKCTEAGKKPIDLLSYESQSDATTNVAGGKADVLYA 246

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           D            +      L +I   S    A  + D      +      ++
Sbjct: 247 DSVITGYAIKQTSK---LEALGNITDASMFGVATAKNDGGLSKAIQAATQKLI 296


>gi|260102128|ref|ZP_05752365.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           helveticus DSM 20075]
 gi|260084018|gb|EEW68138.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           helveticus DSM 20075]
          Length = 546

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 86/295 (29%), Gaps = 30/295 (10%)

Query: 4   DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAE-----------VK 51
            +  ++L ++I  F  FS N+       K    LK G+      +             + 
Sbjct: 15  RWIAALLTILISLFIGFSFNSRESQAAKKDSSVLKIGMEANYPPYNWTQPKKTNGAVPID 74

Query: 52  ANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            +  +  G+DV   + +   +      +            AL S +ID++      T  R
Sbjct: 75  GSNSYANGYDVQIAKIIGKRLHKK---VVVEKTQWDGLLPALTSGKIDLIIAGMSPTAER 131

Query: 111 EISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
                + F           I +   K      +S   GA +  Q GT     +     A 
Sbjct: 132 RK--AINFSEPYRKSTFVVITNKASKYSNAKKLSDFKGAKLTAQQGTLHYDLIKQLKGAK 189

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIIS 222
                         +  +  +   D Y  +     +    N        ++         
Sbjct: 190 REP----AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMTGFKVDHD 245

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
            S  +  + +G+T+  N V+ T   +   +   +  + I +  K       + +L
Sbjct: 246 DSVTSIGVKKGNTKLLNEVNATLRTISNKKREQLMSQAIREQPKAGNETKKENWL 300


>gi|83949515|ref|ZP_00958248.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseovarius nubinhibens ISM]
 gi|83837414|gb|EAP76710.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseovarius nubinhibens ISM]
          Length = 238

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 71/251 (28%), Gaps = 35/251 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +L    L  T+    A           ++ G       +  +   G+  GF+
Sbjct: 1   MK----TILLSTAALALTAGFALADT---------VRMGTEGAYPPYNFINDAGEVDGFE 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L           +++          L S   D +      T  R+    + F  
Sbjct: 48  RELGDELCKRA---ELTCEWVTNEWDSIIPNLVSGNYDTIIAGMSITDERDEV--IDFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +   +     ++    + G  I  Q  T     +A+           + F   +
Sbjct: 103 NYIPPEESLYV----ALTDDVDIMGV-IASQTSTIQSSYVAE------SGATLLEFATPD 151

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+ AA R    DA          LK   +  S+   + D I+   L   +  G  E    
Sbjct: 152 EMVAAVRNGEADAAF---FQGAYLKPIVEESSDLTFVGDPIA---LGGGVGMGLRESDGE 205

Query: 241 VSWTHYAMVTA 251
           +     A +T+
Sbjct: 206 LREKFDAAITS 216


>gi|21221278|ref|NP_627057.1| amino acid ABC transporter solute-binding protein [Streptomyces
           coelicolor A3(2)]
 gi|289771432|ref|ZP_06530810.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces lividans TK24]
 gi|6689161|emb|CAB65558.1| probable amino acid ABC transporter protein, solute-binding
           component [Streptomyces coelicolor A3(2)]
 gi|289701631|gb|EFD69060.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces lividans TK24]
          Length = 309

 Score = 87.1 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 77/246 (31%), Gaps = 12/246 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S      +L  ++ +G  + GI    V F  +  NG+  G   +  + +   +  D
Sbjct: 45  VATASDVKGGDLLDRLRAQGVARLGIAGE-VPFGYIDKNGELTGEAPELAKVIFKRLGVD 103

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             ++Q +P         L S+Q D+++         +    + F    Y     +I+ K 
Sbjct: 104 --RVQPVPTEFGSLIPGLASQQFDVVAAGMYINP--DRCQQVIFSDPDYQMLDAYIVRKG 159

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               + +   +         G T    +A   +    +   ++         A  + R D
Sbjct: 160 NPLGLHNYRDVVKKKAKFATG-TGYAEIAYAVEHGYKEDDILIVPDQVAGLNAVESGRVD 218

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
            + G    +  +   + +         ++   P       A    +T   +  +     +
Sbjct: 219 VFAGTALTVRDVVKKSSKAEATEAFAPLVDGKPHVDGGGFAFRPDETNLRDAFNVELQKL 278

Query: 249 VTAEEL 254
             + EL
Sbjct: 279 KKSGEL 284


>gi|170738228|ref|YP_001779488.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169820416|gb|ACA94998.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 317

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 64/185 (34%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  GI   L   +          GFD D  + +S ++      ++ + L   +  LAL
Sbjct: 68  GTLTIGIAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRK---LKIVALAWADWPLAL 124

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASIC 149
           +S ++D +  N   T  R+      F      D  GF +    K + I     ++G  I 
Sbjct: 125 ESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQAIREPKDVAGLRIV 181

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT  E  L  + + +            ++       A ++ R DA     S L    
Sbjct: 182 TDAGTNQEKILLAWDRENVAHGLKPVQIQYYDDQAMRIVAVQSGRADAVFSVNSVLAYQS 241

Query: 206 LTNDR 210
               +
Sbjct: 242 AQQGK 246


>gi|206563409|ref|YP_002234172.1| putative solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198039449|emb|CAR55416.1| putative solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 317

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 64/185 (34%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  GI   L   +          GFD D  + +S ++      ++ + L   +  LAL
Sbjct: 68  GTLTIGIAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRK---LKIVALAWADWPLAL 124

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASIC 149
           +S ++D +  N   T  R+      F      D  GF +    K + I     ++G  I 
Sbjct: 125 ESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQAIREPKDVAGLRIV 181

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT  E  L  + + +            ++       A ++ R DA     S L    
Sbjct: 182 TDAGTNQEKILLAWDRENVAHGLKPVQIQYYDDQAMRIVAVQSGRADAVFSVNSVLAYQS 241

Query: 206 LTNDR 210
               +
Sbjct: 242 AQQGK 246


>gi|111657046|ref|ZP_01407843.1| hypothetical protein SpneT_02001722 [Streptococcus pneumoniae
           TIGR4]
          Length = 507

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 32/253 (12%)

Query: 35  FLKCGINTGLVGFAE-----------VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLP 82
           +L+ G+      F             +     +  G+DV   + ++  +  +P  ++   
Sbjct: 13  YLRIGMEAAYAPFNWTQDDDSNGAVKIDGTNQYANGYDVQIAKKIAKDLGKEPLVVK--- 69

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SS 139
              +    AL S +ID++      T  R+    +AF    Y      ++ K        S
Sbjct: 70  TKWEGLVPALTSGKIDMIIAGMSPTAERK--QEIAFSSSYYTSEPVLLVKKDSAYASAKS 127

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +   +GA I  Q G      +A    A              ++  A  A   DAY  +  
Sbjct: 128 LDDFNGAKITSQQGVYLYNLIAQIPGAKKET----AMGDFAQMRQALEAGVIDAYVSERP 183

Query: 200 ALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
                +  N +     + P   +      +A  + + D     I      A +       
Sbjct: 184 EALTAEAANSKFKMIQVEPGFKTGEEDTAIAIGLRKNDNRISQI-----NASIETISKDD 238

Query: 257 TQKNINQVSKDTT 269
               ++++ K+  
Sbjct: 239 QVALMDRMIKEQP 251


>gi|326803171|ref|YP_004320989.1| ABC transporter, substrate-binding protein, family 3 [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326650052|gb|AEA00235.1| ABC transporter, substrate-binding protein, family 3 [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 273

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 75/275 (27%), Gaps = 11/275 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     I+ L  LF  +   N            +   +       +     G+  G++V+
Sbjct: 2   KSLKTFIIVLAGLFLAACGNNQGGSES--GAKTVTVAVENASKPLSFTDEKGNLTGYEVE 59

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL  A+      I    ++++   + L++ Q D +         RE       R   
Sbjct: 60  LIQALDEAM--PEYNINIESVDSEAAQVGLETGQYDFIGGGLYKNPEREAMYLFPERHTG 117

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFER 178
               + +       I S+  L+   +           L     +    + +         
Sbjct: 118 ASVIEIYKRADDDSIQSLDDLTDRKVHPVTPNGGIFNLLTAYNEAHPDNQIDIQLGESGS 177

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A      DA     +      +     + +     +  K+     I     +  
Sbjct: 178 FAERFQAVDKGESDAVVMPSNLGADQIIEELGLNVNTADQPVQVKATY-FMIAPDREDLK 236

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             +         A+E  + + +     K+  + ++
Sbjct: 237 EALDKAIQ--QLADEGKLQELSEKWYGKNIFDYEI 269


>gi|330013160|ref|ZP_08307581.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|328533586|gb|EGF60304.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 268

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 81/272 (29%), Gaps = 20/272 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K      L L +    S  T A+ L      G  K G+      F    +N +  G D 
Sbjct: 7   KKISRRVALTLAVSACFSPVTQAAEL---LTEGVFKVGMEVTYPPFESYDSNNNIVGLDP 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +F   ++  +   P  I     +          K+ D +      T  R+          
Sbjct: 64  EFAALIAQHLQAKPQLIDTKFTSLILGI----GKKYDAVISGMYVTPERQKQAD---AIP 116

Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPI 174
               G   I  K   +   +  +L G  + +QAGTT   +L         K         
Sbjct: 117 YALSGASIIALKGGAVQPKTEDELCGVKVGLQAGTTWVTSLKKHSDEWCLKNGKPAITIQ 176

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F    E   A  +    A      A   + +   R    +    ++   PL   + +G+
Sbjct: 177 EFPTAPEASQALLSKNIGAQLEIAPA-AQIIVDKSRGRLAISSTRLVYPLPLGIYVAKGN 235

Query: 235 TEWYNIVSWTHYAMVTAEELG--ITQKNINQV 264
           TE    +  T   +    +    I + N+  +
Sbjct: 236 TELAEAIKATLATLKANGQYAALIKKYNLESI 267


>gi|192293525|ref|YP_001994130.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
 gi|192287274|gb|ACF03655.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
          Length = 318

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 63/218 (28%), Gaps = 16/218 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++         F    A+G+  GF+VD  RAL   I              +    AL   
Sbjct: 89  IRFLTEIDYPPFNFTGADGNPAGFNVDLARALCDEI---KITCTVQMRKFETLLDALAGN 145

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG 153
           + D +  +   T        L F    Y     F+  K           L G  +   AG
Sbjct: 146 RGDAIIASLAVTPQ--TRTKLDFTDPYYRTPARFVARKDAVMPEMRPEFLEGRKVGAVAG 203

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L   F           +   E + AA +    D   GD  +L       D  + 
Sbjct: 204 SAHEAYLKAMF----TDAELHSYPNAEALRAALKRGEVDFIFGDAISLAFWINGTDSENC 259

Query: 214 -----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                   L        +  A+ +G+      ++W  +
Sbjct: 260 CAFSGAPFLESRYFGEGVGIAVRKGNDTLRQALNWALF 297


>gi|317407719|gb|EFV87649.1| extracellular solute-binding protein [Achromobacter xylosoxidans
           C54]
          Length = 314

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 77/251 (30%), Gaps = 16/251 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74
             ++ +  AS L   K  G ++ G       FA + +      G  V+  R +   +  +
Sbjct: 43  GGSAPAAGASTLEAAKAAGKIRIGY-ANEAPFAFMDSKEAKVTGESVEIARVVLKRMGIN 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++ +          LQ+K+ DI++     T  R     +AF   TY  GQ F++ + 
Sbjct: 102 E--VEGVLTEFGSLIPGLQAKRFDIIAAGMYVTPER--CGQVAFSNPTYGVGQAFLVKQG 157

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               + S   +              +      K        +VF       +  +A R D
Sbjct: 158 NPKNLHSYEDVVKNPDAKLGVVVGAIEAEYAAKVKVPAGQIVVFPDAVSALSGVQAGRAD 217

Query: 193 AYTGDISAL--------YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           AY      +            L    P    ++     +   A A    D  + +  +  
Sbjct: 218 AYAATALTVNDLMGKTDAGSGLEKAEPFTDPVIDGKGVRGYGAYAFRTDDKAFADAFNAE 277

Query: 245 HYAMVTAEELG 255
               +  EE  
Sbjct: 278 LAKFIGTEEHK 288


>gi|229515950|ref|ZP_04405407.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae TMA 21]
 gi|229530203|ref|ZP_04419592.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae 12129(1)]
 gi|254291129|ref|ZP_04961926.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|150422974|gb|EDN14924.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|229332336|gb|EEN97823.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae 12129(1)]
 gi|229347050|gb|EEO12012.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae TMA 21]
 gi|327482923|gb|AEA77330.1| Amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio cholerae LMA3894-4]
          Length = 248

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNEAIKGIDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L ++ K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRNHDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|329938381|ref|ZP_08287806.1| putative ABC transporter substrate-binding protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302354|gb|EGG46245.1| putative ABC transporter substrate-binding protein [Streptomyces
           griseoaurantiacus M045]
          Length = 316

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 84/240 (35%), Gaps = 23/240 (9%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S  A +   ++K G LK G   G    A      +    G D+D   A++  +     ++
Sbjct: 57  SVAALLPAAVRKAGTLKVGSAIGAPPGAYYPNGPDKAPAGQDIDLADAVAKVLG---VRL 113

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--- 135
           Q    + +    AL S + D  + N   T  R  +  + F      DGQGF + K     
Sbjct: 114 QRQDASFETILPALGSGKYDFGTGNFGVTTARLKT--IDFV-TYIDDGQGFAVKKGSTTL 170

Query: 136 --GISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAH 189
              ++ ++QL G +I   AGTT E TLA       KA    Y   V+        A +  
Sbjct: 171 KKKVTDLTQLCGLTIGTGAGTTFETTLAAEKDVCAKAGRKPYDVKVYSENAATLTALQQG 230

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNIVSWTHY 246
           R D      S +  L+    +P+          +  +     +       +   V+    
Sbjct: 231 RIDVIM---STINGLRHQAAQPASGTAFLGEYHRLDVGFTFKKHSPLTKAFRAAVNTLIK 287


>gi|307246273|ref|ZP_07528354.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306852882|gb|EFM85106.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 244

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L   +      F      G+  GFDVD   A+   I    +   +          A
Sbjct: 23  QAKDLTFAMEPSYPPFELTNEKGEIIGFDVDIANAICKEI---QANCSFKSQAFDGLIQA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           ++ K+ID      D T  R   +   F    Y     FI  K K   + +     ++ VQ
Sbjct: 80  VKQKRIDGAISAIDITEARAKQVA--FTDAYYDSSASFIAVKGKADLNTA----KNVGVQ 133

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +  +    K    +Y P  +  +++     +  R D   GD + L  +       
Sbjct: 134 NGTTFQQYVLAEAK----QYAPKAYASLQDAVLDLKNGRIDIIFGDTAVLADMLSKEAEL 189

Query: 212 SEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +       + L  A+ + ++E    ++     +    E  
Sbjct: 190 SFVGDKVTNKKYFGNGLGIAVNKSNSELVAELNKGLATIKANGEYQ 235


>gi|262043882|ref|ZP_06016970.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038736|gb|EEW39919.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 268

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 83/267 (31%), Gaps = 21/267 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V++   +   F+  +  A +L +    G  K G+      F    +N +  G D +F   
Sbjct: 13  VALTLAVSACFSPVTQAAELLTE----GVFKVGMEVTYPPFESYDSNNNIVGLDPEFAAL 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +   P  I     +          K+ D +      T  R+              G
Sbjct: 69  IAQHLQAKPQLIDTKFTSLILGI----GKKYDAVISGMYVTPERQKQAD---AIPYALSG 121

Query: 127 QGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERV 179
              I  K   +   +  +L G  + +QAGTT   +L         K          F   
Sbjct: 122 ASIIALKGGAVQPKTEDELCGVKVGLQAGTTWVTSLKKHSDEWCLKNGKPAITIQEFPTA 181

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +    A      A   + +   R    +    ++   PL   + +G+TE   
Sbjct: 182 PEASQALLSKNIGAQLEIAPA-AQIIVDKSRGRLAISSTRLVYPLPLGIYVAKGNTELAE 240

Query: 240 IVSWTHYAMVTAEELG--ITQKNINQV 264
            +  T   +    +    I + N+  +
Sbjct: 241 AIKATLATLKANGQYAALIKKYNLESI 267


>gi|238896097|ref|YP_002920833.1| amino acid ABC transport system periplasmic amino acid-binding
           component [Klebsiella pneumoniae NTUH-K2044]
 gi|238548415|dbj|BAH64766.1| amino acid ABC transport system periplasmic amino acid-binding
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 268

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 83/267 (31%), Gaps = 21/267 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V++   +   F+  +  A +L +    G  K G+      F    +N +  G D +F   
Sbjct: 13  VALTLAVSACFSPVTQAAELLTE----GVFKVGMEVTYPPFESYDSNNNIVGLDPEFAAL 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +   P  I     +          K+ D +      T  R+              G
Sbjct: 69  IAQHLQAKPQLIDTKFTSLILGI----GKKYDAVISGMYVTPERQKQAD---AIPYALSG 121

Query: 127 QGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERV 179
              I  K   +   +  +L G  + +QAGTT   +L         K          F   
Sbjct: 122 ASIIALKGGAVQPKTEDELCGVKVGLQAGTTWVTSLKKHSDEWCLKNGKPAITIQEFPTA 181

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +    A      A   + +   R    +    ++   PL   + +G+TE   
Sbjct: 182 PEASQALLSKNIGAQLEIAPA-AQIIVDKSRGRLAISSTRLVYPLPLGIYVAKGNTELAE 240

Query: 240 IVSWTHYAMVTAEELG--ITQKNINQV 264
            +  T   +    +    I + N+  +
Sbjct: 241 AIKATLATLKANGQYAALIKKYNLESI 267


>gi|90579815|ref|ZP_01235623.1| putative transglycosylase, Slt family protein [Vibrio angustum S14]
 gi|90438700|gb|EAS63883.1| putative transglycosylase, Slt family protein [Vibrio angustum S14]
          Length = 496

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 16/234 (6%)

Query: 12  LIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ L  +           L  I++ G L+ G     + +  + A+G   G D +  +  +
Sbjct: 1   MLALLLSGCQWQEKPLDPLERIRESGVLRVGTLNNQLSY-YIGADG-PTGLDYELAQRFA 58

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +           L+    F AL++  +DI++     T  R    G    P  Y+  Q 
Sbjct: 59  KELGVKLEMQTIFTLSG--LFPALKNGDVDIVAAGLTVTPQR--IQGFHPAPAYYYASQV 114

Query: 129 FIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDA 184
            +  K   +         +  S+ V A ++ E  L +  K + N+ +  I    ++++  
Sbjct: 115 VVYKKGKRRPRDLEELANTKRSLAVVASSSHERQLEELKKKYPNLTWQSIKETDIDDLLR 174

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                  D    D   +    L    P   + L ++    P++  +   + +  
Sbjct: 175 KVANGELDYTVADSVDVA--LLQRTHPELAIAL-ELTEDQPISWFVKDSNNDSL 225


>gi|227529452|ref|ZP_03959501.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Lactobacillus vaginalis ATCC
           49540]
 gi|227350537|gb|EEJ40828.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Lactobacillus vaginalis ATCC
           49540]
          Length = 268

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 14/196 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDP 75
              +N S L  IK+RG L+ G+ +    +            +G DV   + ++  +    
Sbjct: 26  CGKSNKSSLQQIKERGTLRVGMVSANPPYESQVQKNGKTQMQGADVLLVKKIAKNLGVKY 85

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134
                  ++      ALQ+K++D+L  +   T  R+      F    Y      ++ K  
Sbjct: 86  E---LKTMDLDGLLPALQAKKVDMLVTSMAPTPERQK--AAKFTDTYYKSTNVLVVPKAK 140

Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                +V+    A+I V   ++ +  +   F             +V ++  A    + DA
Sbjct: 141 LAQYKNVNNFKHATIAVVNNSSQQPMIHKVFPKA----TTKDLSKVTDLALAVNNGKADA 196

Query: 194 YTGDISALYALKLTND 209
           +  D      L   N 
Sbjct: 197 FCIDKPTATILLKKNP 212


>gi|91975479|ref|YP_568138.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           BisB5]
 gi|91681935|gb|ABE38237.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris BisB5]
          Length = 304

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 64/219 (29%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F    A+G+  GF+VD  RAL   I              +    AL S
Sbjct: 74  VIRFLTETDYPPFNFTGADGNPAGFNVDLARALCEEI---KVTCTVQMRRFETLLDALAS 130

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152
            + D +  +   T        + F    Y     F   K   +       L G  +   A
Sbjct: 131 NRGDAIIASLAVTPQ--TRGKVDFTDSYYRAPGRFAARKDAVMPEIRPEYLEGKKVGAIA 188

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E  L   F           +   E + AA +    D   GD  +L       D  +
Sbjct: 189 GSAHEAYLKAMF----TDAELHSYPNDEALRAAVKRGEVDFIFGDSISLAFWINGTDSEN 244

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                             +  A+ +G+      ++W  +
Sbjct: 245 CCAFSGGPFTESRYFGEGVGIAVRRGNDLLRQSLNWALF 283


>gi|254243669|ref|ZP_04936991.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126197047|gb|EAZ61110.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 1242

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 14/261 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V +LCL   +             + +   ++ G++T    F      G ++G  
Sbjct: 1   MQRLQAVLLLCLACCWPGLAGALTLTRAWLAEHPSIRLGVDTSWPPFEYRDEQGRYQGLA 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
             +   L   +      +   P+  K     L+  +   L+         E    L+F  
Sbjct: 61  AGYIGLLQERLG-----VSLTPVEPKTWTQVLEQAKDGRLNLLPGIMATPERQEYLSFTR 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    +  K   +      L G  + V         L     A +     +    V
Sbjct: 116 PYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPLPSV 171

Query: 180 EEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G     
Sbjct: 172 AAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQPILA 229

Query: 239 NIVSWTHYAMVTAEELGITQK 259
            IV     A ++AEE+   Q 
Sbjct: 230 GIVDKVL-ADLSAEEIERLQA 249


>gi|240168771|ref|ZP_04747430.1| ABC transporter permease protein GlnQ [Mycobacterium kansasii ATCC
           12478]
          Length = 599

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       + + G + GFD +  RA+++ +       +++  +       + 
Sbjct: 87  GVLTVGTLSDAPPNVCINSTGRFTGFDNELLRAIAAKLG---LHARFVGTDFSGLLAQVA 143

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           S++ D+ S +   T  R  ++   F     F     ++     I+S + L +G  I V  
Sbjct: 144 SRRFDVGSASVKATDARRRTVA--FTNGYDFGYYSLVVPPGSAITSFTDLAAGQRIGVVQ 201

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ +     + A+ + H+ DA+    +   A  +    P+
Sbjct: 202 GTVEESYVVDTL-----HLQPVKYPDFATVYASLKTHQIDAWVAPANQAAAA-MRPGDPA 255

Query: 213 EHVILPDIISKSPL-APAIIQGDTEWYNIVSWTHYAMVT 250
             V + +  S     A A+ + +    + ++    A++ 
Sbjct: 256 --VTVANTFSTEDFVAYAVARDNPALVDALNSGLDAVIA 292


>gi|311106204|ref|YP_003979057.1| extracellular solute-binding protein family 3 protein 1
           [Achromobacter xylosoxidans A8]
 gi|310760893|gb|ADP16342.1| extracellular solute-binding protein, family 3 protein 1
           [Achromobacter xylosoxidans A8]
          Length = 278

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 82/241 (34%), Gaps = 16/241 (6%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  +K+RG +  G+      F  +        G++ +  R L+  +      +Q   + 
Sbjct: 30  TLDKVKERGTITIGVLANGGVFGSLDPATQQLVGWNPELARELAKDLGVKAELVQ---VQ 86

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   L S ++D+L  + +    R   LG A  P  +  G      K  GI+    L 
Sbjct: 87  TATRTQFLISGKVDLLIASMELNPERAEILGYAPTPF-FRVGGAAATLKTSGIAKWEDLR 145

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYA 203
           G  +CV  G++    L+  + A         ++   +   A R  +C A   D +     
Sbjct: 146 GKPVCVSQGSSFARPLSTDYGA-----VVKGYKSSSDSLLALRGGQCVAAVHDSTLIQPL 200

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-----AMVTAEELGITQ 258
           L+   +    H  +   +  +       +G+T+    V            + A E  +  
Sbjct: 201 LRSNPEWKDYHAPIATEVLPANSVVWTRKGETDTIAAVDKVVQDWHRKGWLIATETRLGI 260

Query: 259 K 259
            
Sbjct: 261 A 261


>gi|328555068|gb|AEB25560.1| cystine ABC transporter (binding protein) [Bacillus
           amyloliquefaciens TA208]
          Length = 270

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 64/203 (31%), Gaps = 5/203 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     V  L +      S  +         ++    +  G  T       +   G+  G
Sbjct: 1   MKIRLAVMSLTIAATAALSACSAGGEAASGNQKNVKNITVGTGTQFPNICFIDDKGNLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +DV+  + L   +     +  +  ++     ++L   ++DI++   + +  RE       
Sbjct: 61  YDVELVKELDRRL--PDYRFTFKTMDFSNLLVSLGQHKVDIVAHQMEKSAEREKKFLFNQ 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                F  +  ++     I+ +  L G  +     +   L L  + + H   +      +
Sbjct: 119 VAYNNFPLKITVLQDNGNITGIDDLKGKRVITSPTSNGALVLKKWNEKHGSPFDIAYAGQ 178

Query: 179 -VEEIDAAYRAHRCDAYTGDISA 200
              +     ++ R DA      A
Sbjct: 179 GSNDAANQLKSGRADATISTPFA 201


>gi|183980096|ref|YP_001848387.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M]
 gi|183173422|gb|ACC38532.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M]
          Length = 589

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 79/218 (36%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       + + G + GFD +  RA+++ +     +++++  +       + 
Sbjct: 77  GVLTAGTLSDAPPNTCINSTGQFTGFDNELLRAIAAKLG---LQVRFVGTDFSGLLAQVA 133

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           +++ D+ S +   T  R  ++   F     F     ++     I+  S L  G  I V  
Sbjct: 134 ARRFDVGSASVKLTEARRRTVA--FTNGYDFGYYSLVVPPGSAITKFSDLAPGQRIGVVQ 191

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  +      +++   P+ +     +    + H+ DA+        A         
Sbjct: 192 GTVEESYVV-----NSLHLQPVKYPDFATVYGNLKTHQIDAWV--APGNQAEAAIRPGDP 244

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             ++     +   +A  + + +    + ++    A++ 
Sbjct: 245 AVLVANTFGAGDFVAYVVARDNRPLLDALNSGLDAVIA 282


>gi|160943133|ref|ZP_02090370.1| hypothetical protein FAEPRAM212_00613 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445602|gb|EDP22605.1| hypothetical protein FAEPRAM212_00613 [Faecalibacterium prausnitzii
           M21/2]
          Length = 278

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 10/203 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     F  +  +G   G DV+       A      +++++ ++ +++   +++
Sbjct: 42  VIVVG-SDNYPPFNYMGTDGAPTGIDVELATE---AFGRLGYRVKFVTIDWEKKKELVEN 97

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             ID +  +      RE            +  Q   +     I ++  L+G  + VQ+ T
Sbjct: 98  DTIDCIWGSFSM-DGREEEYQW--AGPYLYSRQVVAVRSDSDIRTLQDLAGKVVAVQSTT 154

Query: 155 TTEL-TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             E   L                +  + +         DA     S     +   D   E
Sbjct: 155 KPEELFLNAEQNGLPRLRRLYSLQNRDLLYTTLLKGYADALAAHES--AIRQFMKDYSVE 212

Query: 214 HVILPDIISKSPLAPAIIQGDTE 236
           + IL + +  + L  A  +   +
Sbjct: 213 YRILDEPLMTARLGVAFAKERGD 235


>gi|78357990|ref|YP_389439.1| PAS/PAC sensor signal transduction histidine kinase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78220395|gb|ABB39744.1| PAS/PAC sensor signal transduction histidine kinase / amino
           acid-binding domain sensor histidine kinase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 710

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 77/257 (29%), Gaps = 22/257 (8%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   F  +L L +   T+   +   L         +C  +  L  +  + A G  +GF
Sbjct: 8   MRRSCAFFLMLALCLCLQTAGHAHGQTLE-------FRC--DDSLPPYEFL-AYGRAQGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  +A++         +Q +P         L +   D L+        RE +  + F 
Sbjct: 58  TVDLVQAIARDSG---LHVQIIPGPWHVIKAELDAGNTDALTGMY---YTRERARQVLFS 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                      + K     +   L GA + VQ        + +Y + H      +     
Sbjct: 112 EPYTVVSHSIFVRKGSRAMTAEDLKGAVVAVQRN----DIMHEYAQKHLTGSTLLPCTTR 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    R +A       +    +     +   +  + +  +PL         +   
Sbjct: 168 LEALQAVSDGRAEAALLGR-LMALQLMYEHNITNVTVSGEALLTTPLCFGFAPDRKDIMV 226

Query: 240 IVSWTHYAMVTAEELGI 256
           I +     +    E  +
Sbjct: 227 IFNEGLAHLRMTGEFDV 243


>gi|150399037|ref|YP_001322804.1| extracellular solute-binding protein [Methanococcus vannielii SB]
 gi|150011740|gb|ABR54192.1| extracellular solute-binding protein family 3 [Methanococcus
           vannielii SB]
          Length = 239

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L +++      S ++  L +    G L  G+   +V  +    NG   GF++D+   L 
Sbjct: 1   MLTILLFISGCLSNSSKQLTN--NEGTLTVGVVPYVVPLSYY-ENGKLTGFEIDYANYLG 57

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           + +     K++++P   K+   A+++K++DI       T  R+    + F       G  
Sbjct: 58  NKL---NLKVEFVPYEFKDILNAVENKEVDIAISCITITPERKKR--VHFSRPYLKTGSV 112

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
             +   + +S +S   G  I V  G+  E    ++ K  N+    I +     +    ++
Sbjct: 113 VAVFSTEEVSDISDFDGKKIGVLKGSVHENYALEFKKVRNI--EVITYNTQSSLINGLKS 170

Query: 189 HRCDAYTGDI 198
           +   A   D 
Sbjct: 171 NEVYAVIIDK 180


>gi|311108219|ref|YP_003981072.1| extracellular solute-binding protein, family 3 family protein 9
           [Achromobacter xylosoxidans A8]
 gi|310762908|gb|ADP18357.1| bacterial extracellular solute-binding protein, family 3 family
           protein 9 [Achromobacter xylosoxidans A8]
          Length = 262

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 66/238 (27%), Gaps = 10/238 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78
               A  L +++    L                     +G  VD    ++  +       
Sbjct: 19  AGAQARTLDEVRADQSLNVVTTASAPPHGFKNPKSNQLEGIMVDVAAGVAKHL---KVSD 75

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +   +        L S + D++S     T  R  ++  +     + +G        K  +
Sbjct: 76  KLSDVPFSGLIPTLTSGRADVMSAPLFITEERARAIDFSAPVYEWGEGIVVSDKADKKYA 135

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGD 197
               + G  + V   +     + D             ++    + A  RA R D      
Sbjct: 136 KFEDMKGQRVGVLVDSVQFNMIKDM-----PGTKVSTYQDYSTLLADVRAGRIDLGIVDP 190

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            S +Y +K  N    +         K  +  A+ +G+      V+     M    EL 
Sbjct: 191 PSIIYQIKTKNIPGVKLDTGYQPQRKWQVGMAVQKGNAALLEAVNSALAQMKQNGELA 248


>gi|118475448|ref|YP_891956.1| amino-acid ABC transporter extracellular-binding protein yckK
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118414674|gb|ABK83094.1| probable amino-acid ABC transporter extracellular-binding protein
           yckK [Campylobacter fetus subsp. fetus 82-40]
          Length = 252

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 18/249 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    LI +  +S +++ +          L+ G       F     +G   G+D
Sbjct: 1   MKKILSLMFAALIFIGCSSANSDKN------DAPVLRIGTEGTYSPFTYHDNSGKLVGYD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+     +      P    +   N    F  L S + D+++         + +       
Sbjct: 55  VEVIEEAAKRAGFKPE---FYETNWDAIFSGLNSNRFDMIANQISDNN-PKRAELYTLSN 110

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +      I S+  ++G  I    G+       D   A+    + ++ + +
Sbjct: 111 PYIVTSAAIAVRANNDTIKSLKDINGTKIAQAIGSAYY----DTAVANG--ANIVLVDNL 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A    R D    D  A+    L     +   I       +       +  T+  +
Sbjct: 165 APAIKAVSQGRADGTMNDKLAIL-NYLKTTNDANVKIAFTTGEGTKSVFLFKKELTDARD 223

Query: 240 IVSWTHYAM 248
            ++     M
Sbjct: 224 KINIALDTM 232


>gi|315640026|ref|ZP_07895152.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
 gi|315484235|gb|EFU74705.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
          Length = 271

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 14/205 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53
           M K + +S + + ++ F    ++      I            LK   +     +      
Sbjct: 2   MKKGYILSGIFIGVIIFLVGCSSNKSDSSISSTNETTSSTKVLKATTSGLHYPWNYKDDK 61

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G+DV+   A++  +      +++   +   +   L+S + D+++ +   T  R   
Sbjct: 62  GKLTGYDVEVTEAIAEKLGY---VVKWTTTDFTSQMAQLESGRTDVVAEHVAITDKR--K 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           L   F     +     +        S+S L G  + V  G+  E  + +     + +   
Sbjct: 117 LTYEFTEPYAYPDIELMETSDNNYQSLSDLKGKKVAVALGSFYEDYIRENNP--DDEIEV 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDI 198
           + +E    I       R DAY  D 
Sbjct: 175 VTYEDTSGIPNDLAYGRVDAYLNDK 199


>gi|299782729|gb|ADJ40727.1| Glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum CECT 5716]
          Length = 484

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 76/240 (31%), Gaps = 14/240 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK--- 57
           M       +  L ++         +             G       F     NG +    
Sbjct: 1   MKHWLKRGLTSLAVVAGVVLGLMVAGSEPAHAEKTYTIGTVDTFEPFEIQDKNGTYNGKN 60

Query: 58  -GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G +++  R ++     +  K     ++      AL++ QID        T  R+    +
Sbjct: 61  PGIEIEMLREIAK---HEGFKYNLKIMSFNATLTALEAGQIDASMGGMSVTDERKA--KI 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y DG    + +   I+ +SQL G ++ V++GT + +        +  K     F
Sbjct: 116 DFSKSYYTDGVVMAVPENSKITKLSQLKGKTVDVKSGTASAIYANSVKDKYGFK--VKYF 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                +          A   D      L+       +  I+   I+ +P+A  + +G  +
Sbjct: 174 NTSNTMWNDVMNGNAAATFDDGPV---LQYGIRNGIKLKIVTKEINSTPVAMGVKKGQNQ 230


>gi|229174190|ref|ZP_04301725.1| Extracellular solute-binding protein family 3 [Bacillus cereus MM3]
 gi|228609311|gb|EEK66598.1| Extracellular solute-binding protein family 3 [Bacillus cereus MM3]
          Length = 263

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 9/243 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +  L L +      +  +           +K G + G   F   +     KGFD
Sbjct: 1   MRKSSLLLTLALTVSVGLLSACGSDTASKKTDGKVVKVGTSAGRSPFIFKEGE-KVKGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A +         +++   + +  F  L S +ID ++     +  R+      F  
Sbjct: 60  AEIIEAAAKKAGYK---VEWNVSDFEGLFGLLDSGRIDTIANELSVSSERKK--KYDFSI 114

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G  F + K    I S+  L G ++ V  GT  E  L    K +         +  
Sbjct: 115 PYVYSGSVFAVKKDNNTIKSLEDLKGKTVGVGLGTAGEQELKALNKNNAFTIKTFSEDPT 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DAY  D   +       D  +  V    +     +A    +   +  +
Sbjct: 175 AE-LNEVGLGRVDAYYNDKVQVETTIKKADLDNVKVGFGPLKWGE-IAFPFAKKSEKLED 232

Query: 240 IVS 242
           I  
Sbjct: 233 INK 235


>gi|298346728|ref|YP_003719415.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC
           43063]
 gi|298236789|gb|ADI67921.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii ATCC 43063]
          Length = 304

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 21/257 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            ++K+RG L+ G +T       +  +G    G++VD  +A++  +  D            
Sbjct: 54  AEVKERGVLRNGASTSYAPAEFLLDDGTTPTGYEVDMVKAIALTMGLDDG------TTTT 107

Query: 87  ERFLALQSK---QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQ 142
           E F AL  K     D+ + +   T  R  +  +         G  F + K          
Sbjct: 108 EAFGALLPKIGTTYDLGASSFTVTPERVANYDML---AYMRMGSLFAVAKGNPQGFDPKD 164

Query: 143 LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + G ++ VQ GT  E  L          +          E +  +     + +  A   D
Sbjct: 165 ICGKTVGVQTGTLQETELLPKLSKQCEASGKPPVDIQKEELLSNVFPKVISGQYQAMLAD 224

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                          +   +  I+  SP+   +   + +    +     +++ + ++   
Sbjct: 225 DP--VTSYYVKQTRGQMEQIGQILDPSPIGIVVDNKNQQLSAAIKAAMDSLLASGKMREI 282

Query: 258 QKNINQVSKDTTNPDVQ 274
             N    +      +++
Sbjct: 283 MDNYGAGAGLYDAVELK 299


>gi|118580017|ref|YP_901267.1| multi-sensor signal transduction histidine kinase [Pelobacter
           propionicus DSM 2379]
 gi|118502727|gb|ABK99209.1| multi-sensor signal transduction histidine kinase [Pelobacter
           propionicus DSM 2379]
          Length = 780

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 93/313 (29%), Gaps = 67/313 (21%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F       +I F    S++   +   K    L  G ++  + +  ++  G   GF+++
Sbjct: 14  KQFISLFGASLIFFIFVTSSSVWGMDRTK----LIIGGDSNNLPYEVLQ-KGVPGGFNIE 68

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RA++  +  D   +++   +       L++ +ID+L+         E S  + F    
Sbjct: 69  LMRAVAEVMGLD---VEFRLGSWNNARRNLETGKIDVLAGMY---YSEERSRQMDFSVPH 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                G  + K   I S   L    + VQ G      + D      +  H IV +     
Sbjct: 123 TMVTPGLFVRKGSSIRSFQDLKSKQVIVQEG----DIVHDLMTHSGITPHIIVVQDAAHA 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                + + D             +     +    +   +S+     A+  G+ E      
Sbjct: 179 LKLLASGKHDCVLTPSKLQGEYFIKTFNLTTLHAVKTDLSQLRYCFAVRTGNREL----- 233

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
                                               +D+        GL       I++ 
Sbjct: 234 ---------------------------------LFKLDE--------GL------NILKV 246

Query: 303 MGNYGEMFDRNLG 315
            G Y  ++++  G
Sbjct: 247 NGTYRRIYEKWFG 259


>gi|242237675|ref|YP_002985856.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242129732|gb|ACS84034.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 255

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 75/235 (31%), Gaps = 18/235 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +      L      +        K    L+ G        A  + N    GFD
Sbjct: 1   MKKIILSAFAFAAALLMAGCDSQ-------KDDKVLRVGATGQSYPSAFKQDN-KLVGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      ++++  +       L++K++D ++     T  RE      F  
Sbjct: 53  VEVTETIAKDLNYK---VEWVTADFSGLMGQLEAKKLDTIANVVAITPAREE--KYNFSQ 107

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   + HK    I+++  L G ++    G+     L   F   +   +   +E  
Sbjct: 108 PYSYYGSQIVTHKDNTGINTLDDLKGKTVAGVLGSNHVNNLKKAFA--DGSVNIRTYETR 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +   +   A R D Y      L A     + P    ++   +    +     + +
Sbjct: 166 DGAMSDALAKRVDGYINSRPILLAEINKRNLP--FKMVGSPLVVEKVGFPFQKDE 218


>gi|307132726|ref|YP_003884742.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
 gi|306530255|gb|ADN00186.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
          Length = 321

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 83/252 (32%), Gaps = 18/252 (7%)

Query: 34  GFLKCGIN--TGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L   +         A +   N    G + D  R ++ ++     ++  +  + ++  L
Sbjct: 68  GKLTVAVAALGSSPPLAFLADDNKSIIGSEPDIARLVADSLG---LELNLVSTSWEDWPL 124

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
            + S + D+   N   T  R+      F      D  GF +    K + I S   ++G  
Sbjct: 125 GVASGKYDVAITNVTVTKARKE--RFDFA-TYRADTLGFYVKSSSKIQTIQSAKDIAGLK 181

Query: 148 ICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L D+ K +       + P+        + + ++ R DA  G       
Sbjct: 182 IIVGSGTNQEAILLDWDKQNQAAGLPPFQPVYVTDAAAANLSIQSGRADATFGPNVTGAY 241

Query: 204 LKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
               N +      +       + +A    +G+      ++     ++   E         
Sbjct: 242 KAALNGQTRLVGTVNGGWPQVAHIAVTTRKGNG-LVTALNSALNGVIQGGEYDRVLNRWG 300

Query: 263 QVSKDTTNPDVQ 274
           +  +  +  ++ 
Sbjct: 301 EGVERISRSEIN 312


>gi|294678295|ref|YP_003578910.1| polar amino acid ABC transporter periplasmic polar amino
           acid-binding protein HisJ [Rhodobacter capsulatus SB
           1003]
 gi|294477115|gb|ADE86503.1| polar amino acid ABC transporter, periplasmic polar amino
           acid-binding protein HisJ [Rhodobacter capsulatus SB
           1003]
          Length = 239

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 73/255 (28%), Gaps = 30/255 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++  L +   T+ + +            ++ G       +  +   G+  GF+
Sbjct: 1   MKK-LILTVAALALSAGTALAGD-----------VVRMGTEGAYPPYNFINDKGEVDGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L +       K +++          L S   D +      T  R+    + F  
Sbjct: 49  RELGDTLCAKA---ALKCEWVTNEWDSIIPNLLSGNYDTIIAGMSITDERK--QTIDFSD 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                             + + L G  +  Q GT     +A            + F  ++
Sbjct: 104 NYNPPAAS----AYVATKADADLKGV-VAAQVGTIQADYVA------KSGATLLEFPTLD 152

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  AA +    DA   D  AL       +         D+     +   + + DTE    
Sbjct: 153 DTIAAVKNGEADAVFADKDALKPFVT--EGGEIMWTGSDVPLGGGIGIGLRKSDTELKAK 210

Query: 241 VSWTHYAMVTAEELG 255
            +    AM     L 
Sbjct: 211 FNTAIAAMKADGSLN 225


>gi|256787537|ref|ZP_05525968.1| amino acid ABC transporter solute-binding protein [Streptomyces
           lividans TK24]
          Length = 265

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 77/246 (31%), Gaps = 12/246 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   S      +L  ++ +G  + GI    V F  +  NG+  G   +  + +   +  D
Sbjct: 1   MATASDVKGGDLLDRLRAQGVARLGIAGE-VPFGYIDKNGELTGEAPELAKVIFKRLGVD 59

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             ++Q +P         L S+Q D+++         +    + F    Y     +I+ K 
Sbjct: 60  --RVQPVPTEFGSLIPGLASQQFDVVAAGMYINP--DRCQQVIFSDPDYQMLDAYIVRKG 115

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               + +   +         G T    +A   +    +   ++         A  + R D
Sbjct: 116 NPLGLHNYRDVVKKKAKFATG-TGYAEIAYAVEHGYKEDDILIVPDQVAGLNAVESGRVD 174

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248
            + G    +  +   + +         ++   P       A    +T   +  +     +
Sbjct: 175 VFAGTALTVRDVVKKSSKAEATEAFAPLVDGKPHVDGGGFAFRPDETNLRDAFNVELQKL 234

Query: 249 VTAEEL 254
             + EL
Sbjct: 235 KKSGEL 240


>gi|239978681|ref|ZP_04701205.1| putative ABC transporter substrate-binding protein [Streptomyces
           albus J1074]
 gi|291450575|ref|ZP_06589965.1| ABC amino acid transporter [Streptomyces albus J1074]
 gi|291353524|gb|EFE80426.1| ABC amino acid transporter [Streptomyces albus J1074]
          Length = 328

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 14/197 (7%)

Query: 22  TNASILGDIKKRGFLKCGINTG-LVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
               +   I++RG L+ G +             +    G + D    ++  +   P   Q
Sbjct: 66  AAGLVPAKIRERGTLRIGGSADAAPPLGFYATDDKTRIGVETDLAVLVADTLGLKP---Q 122

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GI 137
           +  ++ +  F+ L S + D +  N   T  R+      F      D   F   K     +
Sbjct: 123 FEEVSWENLFVGLDSGKFDAVFSNVTVTEERKE--KYDFA-TYRLDDIAFEAKKGSGWKV 179

Query: 138 SSVSQLSGASICVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              + ++G  I V +GT  E  L D+     KA         F++  +   A ++ R D 
Sbjct: 180 KGPADVAGKKIAVSSGTNQEKILVDWSEQNEKAGRKPVDIAYFQKDTDYYLALQSGRIDG 239

Query: 194 YTGDISALYALKLTNDR 210
           Y G   A+     +  +
Sbjct: 240 YLGPSPAVSYHVASAGQ 256


>gi|304389570|ref|ZP_07371532.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315656813|ref|ZP_07909700.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|304327123|gb|EFL94359.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315492768|gb|EFU82372.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 311

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 21/257 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            ++K+RG L+ G +T       +  +G    G++VD  +A++  +  D            
Sbjct: 61  AEVKERGVLRNGASTSYAPAEFLLDDGTTPTGYEVDMVKAIALTMGLDDG------TTTT 114

Query: 87  ERFLALQSK---QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQ 142
           E F AL  K     D+ + +   T  R  +  +         G  F + K          
Sbjct: 115 EAFGALLPKIGTTYDLGASSFTVTPERVANYDML---AYMRMGSLFAVAKGNPQGFDPKD 171

Query: 143 LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + G ++ VQ GT  E  L          +          E +  +     + +  A   D
Sbjct: 172 ICGKTVGVQTGTLQETELLPKLSKQCEASGKPPVDIQKEELLSNVFPKVISGQYQAMLAD 231

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                          +   +  I+  SP+   +   + +    +     +++ + ++   
Sbjct: 232 DP--VTSYYVKQTRGQMEQIGQILDPSPIGIVVDNKNQQLSAAIKAAMDSLLASGKMREI 289

Query: 258 QKNINQVSKDTTNPDVQ 274
             N    +      +++
Sbjct: 290 MDNYGAGAGLYDAVELK 306


>gi|222082273|ref|YP_002541638.1| octopine ABC transporter [Agrobacterium radiobacter K84]
 gi|221726952|gb|ACM30041.1| octopine ABC transporter [Agrobacterium radiobacter K84]
          Length = 285

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 84/277 (30%), Gaps = 42/277 (15%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      +    L+ L F S   +A    + KK   +          +   K++G   G+
Sbjct: 1   MKYLISLMKAFSLLTLIFASTVAHA----EEKKWTHVTIATEGEFRPWNFTKSDGTLDGY 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  + L + +  + + +     +      ALQ+ + D +      T  RE  +   F 
Sbjct: 57  EIDLIKYLCAHMKVECTTVV---QSFDGMIPALQAGKFDAIISGMSATSKREEVIA--FS 111

Query: 120 PITYFDGQGFIMHKKKGISSV------------------------SQLSGASICVQAGTT 155
                 GQ F   K   ++ +                          L G +I VQ  + 
Sbjct: 112 DSYGTTGQTFATLKSDPLAQMPLKDQVFSLGSNEQGAIEALKQLEPLLKGKTIGVQTASI 171

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E  L  Y K          ++  E+ D   +A R D      +A  +   +     +  
Sbjct: 172 AENFLQKYLK---DVVTIQEYKTTEQHDLDLKAGRVD-LIMASTAYLSTAASKPGNEDFA 227

Query: 216 ILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248
           +         L       + + D E   + +    A 
Sbjct: 228 LTGPRFQGGLLGRGSSVGLRKTDPELKALFNDAIAAA 264


>gi|190150674|ref|YP_001969199.1| arginine-binding periplasmic protein precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|189915805|gb|ACE62057.1| arginine-binding periplasmic protein precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
          Length = 239

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 73/226 (32%), Gaps = 15/226 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L   +      F      G+  GFDVD   A    I    +   +          A
Sbjct: 18  QAKDLTFAMEPSYPPFELTNEKGEIIGFDVDIANATCKEI---QANCSFKSQAFDGLIQA 74

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           ++ K+ID      D T  R   +   F    Y     FI  K K   + +     ++ VQ
Sbjct: 75  VKQKRIDGAISAIDITEARAKQVA--FTDAYYDSSASFIAVKGKADLNTA----KNVGVQ 128

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +  +    K    +Y P  +  +++     +  R D   GD + L  +       
Sbjct: 129 NGTTFQQYVVAEAK----QYAPKSYASLQDAVLDLKNGRIDIIFGDTAVLADMLSKEAEL 184

Query: 212 SEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +       + L  A+ + + E    ++    A+    E  
Sbjct: 185 SFVGDKVTNKKYFGNGLGIAVNKSNGELVAELNKGLAAIKANGEYQ 230


>gi|166030936|ref|ZP_02233765.1| hypothetical protein DORFOR_00617 [Dorea formicigenerans ATCC
           27755]
 gi|166029203|gb|EDR47960.1| hypothetical protein DORFOR_00617 [Dorea formicigenerans ATCC
           27755]
          Length = 261

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 98/278 (35%), Gaps = 26/278 (9%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +++L    L             D  +   +  G++     ++   +NG++KG DV+  + 
Sbjct: 1   MAVLLAGSLMLGGCGVKKEKAAD-NELPEIVIGMDY-FEPYSYQVSNGEYKGIDVELAKE 58

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
               +   P   ++  +  +++   L    ID L          +      +     +  
Sbjct: 59  AFQRLGYQP---KFENIVWEDKDELLAEGTIDRLWSCYSMNGREDKYQ---WAGPYLYSR 112

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAA 185
           Q   + K+  I+++  L G  I VQA T  E        +   +   +  F    E+ AA
Sbjct: 113 QMVAVRKESEINTIQDLEGKRIAVQATTKAEDLFLHKIASDLPQMESVNCFSTTNELYAA 172

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            R    DA  G  + L +L    +    + +L + I  S L  A  +G  +         
Sbjct: 173 LRKDYVDAIAGHEAMLGSLVRDGED--AYRMLDESIYTSELGIAFKKGTHK--------- 221

Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
                A+EL    + + ++  +    ++ +  G+D   
Sbjct: 222 ---EVAQEL---TETLEEMRNEGITEEIVKKYGLDADE 253


>gi|306833817|ref|ZP_07466942.1| amino acid ABC superfamily ATP binding cassette transporter
           periplasmic protein [Streptococcus bovis ATCC 700338]
 gi|304424011|gb|EFM27152.1| amino acid ABC superfamily ATP binding cassette transporter
           periplasmic protein [Streptococcus bovis ATCC 700338]
          Length = 197

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 62/204 (30%), Gaps = 14/204 (6%)

Query: 38  CGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
               +    F       A   + G D++   A++  +  D   + +  ++      ++ S
Sbjct: 2   IATESEFAPFEFKILIDAKDSFVGADIELENAIADTLGVD---VDFSLMSFNNVLASVTS 58

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQA 152
            + DI       T  R+      F    Y      I+ K      +++  L+G ++  Q 
Sbjct: 59  GKADIAIARVSVTDERKK--AYDFSDAYYEAENVVIIKKSDEATYTTLESLAGKAVGAQK 116

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E    D           +      E+    + ++  A     +      L ND   
Sbjct: 117 GSIQENIAKDQLP----DSSLVSLTSNGEMINELKNNQLQAVVLGKAIAEGYVLQNDDLM 172

Query: 213 EHVILPDIISKSPLAPAIIQGDTE 236
              +  +       A A+ +   +
Sbjct: 173 IADMTLESNDIDAYAVALPKEQAK 196


>gi|308234441|ref|ZP_07665178.1| amino acid ABC transporter permease protein [Atopobium vaginae DSM
           15829]
 gi|328944287|ref|ZP_08241751.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
 gi|327491206|gb|EGF22981.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
          Length = 585

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 61/182 (33%), Gaps = 25/182 (13%)

Query: 34  GFLKCGINTGLVGFAEV------------KANGDWK-GFDVDFCRALSSAIFDDPSKIQY 80
           G L  G+      +                + G++  G+DV   + ++ A+     K++ 
Sbjct: 98  GVLSVGMEANYAPYNWTQTNDAHDGVPISNSTGEYANGYDVQVAKRMADALG---LKLKI 154

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--- 137
           + +      +ALQS +ID +      T  R     + F    Y+     +  K       
Sbjct: 155 VKMEWDGLSVALQSGKIDAIIAGMTSTPER--CKEIDFTHPYYYSDMVMVTKKSGSFAGA 212

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S+   +GA +  Q  T     +      +      + F     + A+  + + DAY  +
Sbjct: 213 KSIQDFAGAKVTAQLNTFHYKLIDQIPNVNKQ----VAFSDFPTMIASVMSGKIDAYVSE 268

Query: 198 IS 199
             
Sbjct: 269 RP 270


>gi|317506835|ref|ZP_07964608.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254871|gb|EFV14168.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
          Length = 473

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 59/205 (28%), Gaps = 18/205 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67
           +  ++ L + +  + AS          L+ G       F       G+  G DV+  RAL
Sbjct: 1   MTAVLCLLWGAVGSPASAEQA------LRFGTEGTYSPFTYHDPATGELVGLDVEVARAL 54

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +        ++       F  L + Q D ++     T  RE +  L    I      
Sbjct: 55  AAKMGRRAE---FVEAPFDSLFAGLDAGQFDFVANQIAATPEREQAYSLTAPYIYATGLI 111

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                    I S   L G  +   +  +    LA    A       +      +      
Sbjct: 112 -ITRAGDDSIRSPGDLKG-KLVADSPVSNWGVLAAKLGAR------LEASDATQALILLE 163

Query: 188 AHRCDAYTGDISALYALKLTNDRPS 212
             R DA   D     A K    +  
Sbjct: 164 QGRVDAVVQDDLTFLAYKAKVPQAK 188


>gi|307264022|ref|ZP_07545622.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870633|gb|EFN02377.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 244

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 73/226 (32%), Gaps = 15/226 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L   +      F      G+  GFDVD   A    I    +   +          A
Sbjct: 23  QAKDLTFAMEPSYPPFELTNEKGEIIGFDVDIANATCKEI---QANCSFKSQAFDGLIQA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           ++ K+ID      D T  R   +   F    Y     FI  K K   + +     ++ VQ
Sbjct: 80  VKQKRIDGAISAIDITEARAKQVA--FTDAYYDSSASFIAVKGKADLNTA----KNVGVQ 133

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +  +    K    +Y P  +  +++     +  R D   GD + L  +       
Sbjct: 134 NGTTFQQYVVAEAK----QYAPKSYASLQDAVLDLKNGRIDIIFGDTAVLADMLSKEAEL 189

Query: 212 SEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +       + L  A+ + + E    ++    A+    E  
Sbjct: 190 SFVGDKVTNKKYFGNGLGIAVNKSNGELVAELNKGLAAIKANGEYQ 235


>gi|15640042|ref|NP_062594.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121730360|ref|ZP_01682717.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|147674023|ref|YP_001218402.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|153819852|ref|ZP_01972519.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|153824197|ref|ZP_01976864.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|227080247|ref|YP_002808798.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio cholerae M66-2]
 gi|229508296|ref|ZP_04397800.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae BX 330286]
 gi|229508865|ref|ZP_04398356.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae B33]
 gi|229517136|ref|ZP_04406582.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae RC9]
 gi|229606570|ref|YP_002877218.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae MJ-1236]
 gi|254851575|ref|ZP_05240925.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746807|ref|ZP_05420753.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholera CIRS 101]
 gi|262155887|ref|ZP_06029009.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae INDRE 91/1]
 gi|262167099|ref|ZP_06034814.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae RC27]
 gi|298501196|ref|ZP_07010995.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9654401|gb|AAF93188.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121627891|gb|EAX60473.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|126509613|gb|EAZ72207.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|126518281|gb|EAZ75506.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|146315906|gb|ABQ20445.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|227008135|gb|ACP04347.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio cholerae M66-2]
 gi|227011987|gb|ACP08197.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio cholerae O395]
 gi|229346199|gb|EEO11171.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae RC9]
 gi|229354140|gb|EEO19072.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae B33]
 gi|229354569|gb|EEO19491.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae BX 330286]
 gi|229369225|gb|ACQ59648.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae MJ-1236]
 gi|254847280|gb|EET25694.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735564|gb|EET90963.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholera CIRS 101]
 gi|262024485|gb|EEY43171.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae RC27]
 gi|262030339|gb|EEY48981.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae INDRE 91/1]
 gi|297540068|gb|EFH76130.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 248

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
              L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  LGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNEAIKGIDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L ++ K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRNHDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|254474415|ref|ZP_05087801.1| extracellular solute-binding protein, family 3 [Ruegeria sp. R11]
 gi|214028658|gb|EEB69493.1| extracellular solute-binding protein, family 3 [Ruegeria sp. R11]
          Length = 235

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 66/255 (25%), Gaps = 32/255 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L    L  T+    A           ++ G       +  +   G+  GF+
Sbjct: 1   MK----SLFLGTAALALTAGVAMADT---------VRLGTEGAYPPYNFLNDAGEVDGFE 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L      D    +++  +       L S   D +      T  R+    ++F  
Sbjct: 48  RELGDELCKRAELD---CEWVTNDWDSIIPNLLSGNYDTIIAGMSITEERKEV--VSFTQ 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                             S   ++ A +  QA T     +A      +     + F   +
Sbjct: 103 GYTRP-----SPSAYAALSDVDVNSAVVSAQASTIQSSHVA------STGATLVEFPTPD 151

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AA  A   DA   D      L    +      I  D+     +  A  Q D E    
Sbjct: 152 ETIAAVTAGEVDAVMADKD---FLTPIVEETELQFIAEDVFLGDGIGMAFRQSDDELRAK 208

Query: 241 VSWTHYAMVTAEELG 255
                  M     L 
Sbjct: 209 FDAAIDTMKADGSLN 223


>gi|315655273|ref|ZP_07908174.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii ATCC 51333]
 gi|315490528|gb|EFU80152.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Mobiluncus curtisii ATCC 51333]
          Length = 311

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 21/257 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            ++K+RG L+ G +T       +  +G    G++VD  +A++  +  D            
Sbjct: 61  AEVKERGVLRNGASTSYAPAEFLLDDGTTPTGYEVDMVKAIALTMGLDDG------TTTT 114

Query: 87  ERFLALQSK---QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQ 142
           E F AL  K     D+ + +   T  R  +  +         G  F + K          
Sbjct: 115 EAFGALLPKIGTTYDLGASSFTVTPERVANYDML---AYMDMGSLFAVAKGNPQGFDPKD 171

Query: 143 LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + G ++ VQ GT  E  L          +          E +  +     + +  A   D
Sbjct: 172 ICGKTVGVQTGTLQETELLPKLSKQCEASGKPPVDIQKEELLSNVFPKVISGQYQAMLAD 231

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                          +   +  I+  SP+   +   + +    +     +++ + ++   
Sbjct: 232 DP--VTSYYVKQTRGQMEQIGQILDPSPIGIVVDNKNQQLSAAIKAAMDSLLASGKMREI 289

Query: 258 QKNINQVSKDTTNPDVQ 274
             N    +      +++
Sbjct: 290 MDNYGAGAGLYDAVELK 306


>gi|308234955|ref|ZP_07665692.1| Solute-binding protein of ABC transporter system [Gardnerella
           vaginalis ATCC 14018]
 gi|311114262|ref|YP_003985483.1| amino acid ABC transporter binding protein [Gardnerella vaginalis
           ATCC 14019]
 gi|310945756|gb|ADP38460.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Gardnerella vaginalis ATCC 14019]
          Length = 289

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 69/242 (28%), Gaps = 15/242 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           +                    G L  G        +       + KG++     A++  +
Sbjct: 32  VSTAACGSQNAQDTNQKTITPGVLTIGTAQPTYTPWMYDNKPENGKGYESAVAYAVAKKL 91

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             D  K++++             K  D   +    T  R+    + F P  Y   QG ++
Sbjct: 92  GYDKDKVKWVRTTFDSAVTP-GPKDFDFNLQQFSITEERKK--AVDFSPSYYNATQGVVV 148

Query: 132 HKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            K        +++ L  A+I    GTT+     D  K+         F   + +  A  +
Sbjct: 149 KKDSKFANAKTLADLKTATIGAMVGTTSYSFAKDKIKS-----DIQTFNDNDALVQALDS 203

Query: 189 HRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + DA       S                 +     K      + +G ++    V+    
Sbjct: 204 KQIDALVIDTPSSVNIVRSKQVKEGVVLGQIAGSEDKEGTGLVLPKG-SKLTADVTKAVN 262

Query: 247 AM 248
           A+
Sbjct: 263 AL 264


>gi|260463584|ref|ZP_05811783.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mesorhizobium opportunistum WSM2075]
 gi|259030675|gb|EEW31952.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mesorhizobium opportunistum WSM2075]
          Length = 289

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 16/242 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +   + L   KK G+++ G       F     +G   G   +  +A+ + +     ++  
Sbjct: 30  AHAETTLERAKKDGYIRVG-FANEAPFGFATPDGKLTGEAPEVAKAVLAKMG--IPQVDG 86

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---- 136
           +          L++ + DI++        R     + F   +Y  GQ  ++ K       
Sbjct: 87  VLTEFGSLIPGLKAGRFDIIAAGMFINPKR--CAEINFSEPSYGIGQAMLVVKGNPKGVK 144

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
             SS+       + V AG        D   A       +       + AA +A R DA  
Sbjct: 145 DYSSIKDNPDLKLAVMAGAVEGGYAKDAGVAAG---QIVSLPDQSSLVAAVQAGRADAAA 201

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAP---AIIQGDTEWYNIVSWTHYAMVTAE 252
               ++  +    D         ++  KS          + DT+     +      + + 
Sbjct: 202 LTALSIADMAKKADGVESTKPFGEVNGKSVKGHGGFGFRKEDTDLQEAFNAELKKFLGSP 261

Query: 253 EL 254
           E 
Sbjct: 262 EH 263


>gi|325695870|gb|EGD37761.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK160]
          Length = 266

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 9/223 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  ++ S          +       +  FA  + NG+  G+D++  +A+   +     +I
Sbjct: 15  AACSHQSTPQKNSSPKTITVATAGDVPPFAY-EENGNLTGYDIEVLKAIDEKL--SDYEI 71

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +     +  F  L S      + N  +T  R  +    +      +    + +KK  ++
Sbjct: 72  HFQRTAWESIFPGLDSGHYQAAANNLSYTKER--ADKYLYSLPISKNPLVLVSNKKNPLT 129

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTG 196
           S+ Q++G +     GT+    + ++ + H      I +   +  +          D    
Sbjct: 130 SLEQIAGKTTQEDIGTSNAQFINNWNQKHTENPATIHYSGEDIGKRIFDLSNGDFDFLIF 189

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           D  +    K+  +R  +  ++    + SP    I   + + + 
Sbjct: 190 DKVS--VQKIIKERGLDLSVVDLPSTDSPNNYIIFSSEEKAFK 230


>gi|324994561|gb|EGC26474.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK678]
 gi|327462545|gb|EGF08869.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1]
 gi|327474401|gb|EGF19807.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK408]
 gi|327489786|gb|EGF21576.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1058]
          Length = 266

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 9/223 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  ++ S          +       +  FA  + NG+  G+D++  +A+   +     +I
Sbjct: 15  AACSHQSTPQKNSSPKTITVATAGDVPPFAY-EENGNLTGYDIEVLKAIDEKL--SDYEI 71

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +     +  F  L S      + N  +T  R  +    +      +    + +KK  ++
Sbjct: 72  HFQRTAWESIFPGLDSGHYQAAANNLSYTKER--ADKYLYSLPISKNPLVLVSNKKNPLT 129

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTG 196
           S+ Q++G +     GT+    + ++ + H      I +   +  +          D    
Sbjct: 130 SLEQIAGKTTQEDIGTSNAQFINNWNQKHTENPATIHYSGEDIGKRIFDLSNGDFDFLIF 189

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           D  +    K+  +R  +  ++    + SP    I   + + + 
Sbjct: 190 DKVS--VQKIIKERGLDLSVVDLPSTDSPNNYIIFSSEEKAFK 230


>gi|310827322|ref|YP_003959679.1| amino acid ABC transporter [Eubacterium limosum KIST612]
 gi|308739056|gb|ADO36716.1| amino acid ABC transporter [Eubacterium limosum KIST612]
          Length = 281

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 42/291 (14%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDW 56
           M K    FVSIL  +++         S      + G   LK  ++     F E+  NG+ 
Sbjct: 1   MKKITGVFVSILMAVLILAGCSGQGGSA-----QSGEAPLKVAMDLKFPPFTEMDENGNP 55

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KG +VD  +A    +  +   ++ +  +      AL++ + DI+  +      R+    +
Sbjct: 56  KGIEVDIAKAFGDYLGRE---VEIINTDFSMLIPALETGEADIIICDMTVNEERKEV--V 110

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY----- 171
            F     +                  L G    V+   T E+   D+F   + +Y     
Sbjct: 111 DFSEPYLYGR-------------TLALVGKDFAVRNNVTDEMKPEDFFAIKDARYVGLAG 157

Query: 172 -----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS---- 222
                 P  +    E      +   +   G                 +    +I      
Sbjct: 158 TISVSVPQSYGIPVEEITDVASGLMEINNGTADVFVGANTIIGNHDAYPDTTEIYWGIKE 217

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVT-AEELGITQKNINQVSKDTTNPD 272
            S  A A+ +G+TE  +  +     M              ++   +    D
Sbjct: 218 YSQSAMAVKKGNTELLDQANAFVKTMYEDGGFYKTAGDKYDEAIHNYLKDD 268


>gi|218463236|ref|ZP_03503327.1| extracellular solute-binding protein family 3 [Rhizobium etli Kim
           5]
          Length = 288

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 73/220 (33%), Gaps = 14/220 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GF+VD  R + S +     K Q   +   +   AL + 
Sbjct: 57  LRFLTSVDFPPFNFTDQNGKLSGFNVDLAREICSELEIS-DKCQIQAIPFADLKDALAAS 115

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+      +   + + L+G  + V  G
Sbjct: 116 QGDAVIAGLAVTP--ELRRQFVFSRPYLMLPARFVRKLSVPVEGKTAAALAGRPVGVVKG 173

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  LA +F A   +     F+  + + AA +  + DA   D   L     +      
Sbjct: 174 TVHEAMLAAFFPALKAQ----TFDTKDALLAALKDGKVDAAFADALQLSFWVSSPASDKC 229

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +   L +      +   + Q D+   + +     A+
Sbjct: 230 CALFDGPYLSEHFLGEGMTIMLRQKDSVLTSAIDHALAAL 269


>gi|134100502|ref|YP_001106163.1| ABC transporter substrate-binding protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291005019|ref|ZP_06562992.1| ABC transporter substrate-binding protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133913125|emb|CAM03238.1| ABC transporter substrate-binding protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 305

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 94/277 (33%), Gaps = 46/277 (16%)

Query: 6   FVSILCLIILFFTSFSTN----------ASILGDIKK--------------RGFLKCG-- 39
             + LCL  L   +  T           A ++  I+K               G L+ G  
Sbjct: 10  LTAALCLTALLVGACGTAPATTPGLDVHADVVSAIQKDESIAALLPEETRRNGVLRVGSS 69

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           I     G    + +G   G D+D   A +  +     +++  P   +    AL S + ++
Sbjct: 70  IGGSPPGAFYAEDDGTAVGQDIDIADATARVLG---VRVEREPAAFEAILPALGSGKYEV 126

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTT 156
            + N   T  R+ +  + F      DGQGF + +   +  V+    L G ++   AGTT 
Sbjct: 127 GTGNFGVTEERKKT--IDFV-TYINDGQGFAVRRDSELPPVTDVTQLCGRTVGTGAGTTF 183

Query: 157 ELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           E TL        ++   +Y   VF     + +A    + D      S +  L+    +  
Sbjct: 184 EATLNAQRHRCAESGRPEYQVQVFSEQSALYSALNQGKVDVLM---STINGLRYGVAQQP 240

Query: 213 EHVILPDIISKSPLAPAIIQGD---TEWYNIVSWTHY 246
               L +      +  A+ +G          V+    
Sbjct: 241 NLKFLNEFRRLD-VGFAVRKGSALAPALQAAVNKLIQ 276


>gi|150399571|ref|YP_001323338.1| extracellular solute-binding protein [Methanococcus vannielii SB]
 gi|150012274|gb|ABR54726.1| extracellular solute-binding protein family 3 [Methanococcus
           vannielii SB]
          Length = 252

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 11/196 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  ++ ++ L+  F +               G L  G+   L  +   + NG+ KGF++D
Sbjct: 2   KSLYIILITLLSPFSSIIDIGTDDYEI---TGVLTVGVYPNLPPYTY-EENGELKGFEID 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +S  +   P  I Y      E + A++++ ID    +     L      + +    
Sbjct: 58  LLTEISKRMKVSPEFIPYNY--NNEPYNAVKNRDIDCAISS---NFLSAHKNEIKYSRAY 112

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
               +  +  K      +  + G  I V   +++E       ++  M + P+ ++  E +
Sbjct: 113 LSTYEVILCSKNSKYYRLEDMKGKKIGVLKFSSSEEKGKYLLRS--MNFIPVSYDNNEIM 170

Query: 183 DAAYRAHRCDAYTGDI 198
                +   DA   D 
Sbjct: 171 IEDLISGNIDAVITDK 186


>gi|67921803|ref|ZP_00515320.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
 gi|67856395|gb|EAM51637.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
          Length = 294

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 83/256 (32%), Gaps = 12/256 (4%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M         +++  L    F S     ++L  I K G LK GI    V F     NGD 
Sbjct: 5   MKNIKVSGIIINLFLLFFSSFPSHGQEETVLERIDKTGLLKVGIREDAVPFGYRDINGDL 64

Query: 57  KGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G  +DF       L   +      I+        RF  +  + +DI         L E 
Sbjct: 65  EGLCLDFIAVLRDKLKQELNKQVIAIKVYKSTLFNRFELVSDRIVDIECGPNTIRELPEY 124

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            +  +   +           K K I     L   +I V   TT E  +A+ +   N+   
Sbjct: 125 QIQFSTPFLLTGTQLLIEADKAKTIDPDGSLENVNIGVLKNTTNEQLMAEKYPLANL-VQ 183

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILP-DIISKSPLAPA 229
                       A R  + DA+  D   L            ++++++P + I        
Sbjct: 184 FQGVTGRYRGIQALRGDKIDAFASDGILLVGEAIVQDLRLGADYLLVPRNPIDCEKYGLI 243

Query: 230 IIQGDTEWYNIVSWTH 245
           +   D +W + ++   
Sbjct: 244 LPNNDPQWLSFINSLI 259


>gi|329910723|ref|ZP_08275364.1| extracellular solute-binding protein, family 3 [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327546103|gb|EGF31166.1| extracellular solute-binding protein, family 3 [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 281

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 71/240 (29%), Gaps = 15/240 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +  + L  +K+ G ++         FA   A+G   G   +  + + + +      ++ +
Sbjct: 25  SAETTLERVKRTGEIRVAY-ANEAPFAYTTADGKVTGESPEIAKIIFAKLGV--PNVKPV 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-----MHKKKG 136
            +        L + + D+++     T  R     + F    Y      +       K + 
Sbjct: 82  LVEWGSLIPGLMAGRFDVIAAGMYVTPER--IKQVLFTDPHYQLADTLLVAKGNPRKLRS 139

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
            + ++      + + AGT+          A       +          A R  R DA  G
Sbjct: 140 YADIAANDKVRLAIMAGTSQYAYA---IAAGIPDSRIMQVPTTTAQLQAVRTRRADAAVG 196

Query: 197 DISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
               + AL                D       A A  Q D    + V+    A + + E 
Sbjct: 197 TALTMKALAEKGGARVAAITDFTDDPSHIGYGALAFRQEDQTLRDAVNGALQAWLGSPEH 256


>gi|309785091|ref|ZP_07679724.1| arginine-binding periplasmic 2 domain protein [Shigella dysenteriae
           1617]
 gi|308927461|gb|EFP72935.1| arginine-binding periplasmic 2 domain protein [Shigella dysenteriae
           1617]
          Length = 108

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 18/126 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L       ++                +  G++     F  + AN +  GFD
Sbjct: 1   MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +AL   +    ++  +          +L+ ++ D +    D T   + S  ++F  
Sbjct: 48  IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITP--DRSKQVSFTT 102

Query: 121 ITYFDG 126
             Y + 
Sbjct: 103 PYYENW 108


>gi|256828115|ref|YP_003156843.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577291|gb|ACU88427.1| extracellular solute-binding protein family 3 [Desulfomicrobium
           baculatum DSM 4028]
          Length = 256

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 11/219 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L CG+ TG   +     +G+  GFDVD  +A+ + +    +  ++   +       L   
Sbjct: 25  LTCGVATGFPPYQFA-IDGEPAGFDVDVAKAVCARL---DTPARFEQGDWDNVVNMLLFG 80

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID++    +    R       F            +      +SV  L G  I     + 
Sbjct: 81  RIDLIV-GMEINAFRHEY--FEFSAPYAKRHDVVFVAANSTATSVEDLFGLVITGDRHSF 137

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            EL      +  + K   +  +  EE           A            LT  R  +  
Sbjct: 138 VELLWKK--EGIHHKIRIMQAKTKEESMDLLARGETAAAIM--PLEVGKYLTRQRGLKIR 193

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           +L +    S +A A+ +G  E    ++     M +  EL
Sbjct: 194 MLMNPDPGSEVAIALRKGQPELLKRINEALLEMQSEGEL 232


>gi|160945459|ref|ZP_02092685.1| hypothetical protein FAEPRAM212_02983 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443190|gb|EDP20195.1| hypothetical protein FAEPRAM212_02983 [Faecalibacterium prausnitzii
           M21/2]
          Length = 280

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 9/207 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IK +G +  G            A+G++ GFD +   A+ + +  +P    ++ +N  
Sbjct: 50  LDYIKGKGKMVIGYTV-YEPMNYTDADGNFTGFDTELAIAVCAKLGVEPE---FVEINWD 105

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            + + L +K ID +      T   +I    A       + Q  ++ +    +S + L+G 
Sbjct: 106 TKVVELDAKSIDCIWNGMTLTE--DIMANTATTKAYAKNAQVVVVKEGTAYTSTADLAGK 163

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           ++  +AG+  E  +      +  K   +      +      A   DA   D++   A+  
Sbjct: 164 TVVAEAGSAGEAAIQ--GDENLAKADYVSKSVQTDCLMEVAAGTADAAVLDLTLANAMIG 221

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233
                +   I+ ++ ++     A  +G
Sbjct: 222 EGTDYAGLKIVDELNAEE-YGVAFRKG 247


>gi|307132982|ref|YP_003884998.1| amino acid ABC transporter periplasmic amino acid-binding portion
           [Dickeya dadantii 3937]
 gi|306530511|gb|ADN00442.1| Amino acid ABC transporter, periplasmic amino acid-binding portion
           [Dickeya dadantii 3937]
          Length = 259

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 74/235 (31%), Gaps = 17/235 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     +      +  S          L+ G        +  + N    GFD
Sbjct: 3   MKKIILPVLALSAAILAAGCDSQNS------DEKVLRIGATGQSYPSSFKQDN-KLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    ++  +      ++++  +       L++ ++D ++     T  R      +F  
Sbjct: 56  VEVAETIAKDLNYK---VEWVTADFSGLMGQLEASKLDTIANVVAITPAR--QEKYSFSQ 110

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + G   + HK    I+++  L G ++    G+     L   F   +   +   +E  
Sbjct: 111 PYSYYGSQIVTHKDNANINTLDDLKGKTVAGVLGSNHVNNLKKAFA--DGSVNIRTYETR 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +   +   A R + Y      L A     + P    ++ + +    +     +  
Sbjct: 169 DGAMSDALAKRVEGYINSRPILLAEINKRNLP--FKLVGEPLVVEQVGFPFHKDQ 221


>gi|290956093|ref|YP_003487275.1| binding-protein-dependent transporter component [Streptomyces
           scabiei 87.22]
 gi|260645619|emb|CBG68710.1| binding-protein-dependent transport system, secreted component
           [Streptomyces scabiei 87.22]
          Length = 294

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 74/229 (32%), Gaps = 13/229 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  L  +K  G +    +          A     G +++   AL+  +        +   
Sbjct: 53  AGTL--VKD-GQITYCSDISAPPLTYYDAAQKPVGAEIELGDALAQRLGVKA---NWANT 106

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
                  ALQ+KQ D +         RE  +      +   +       K +GI  V+ L
Sbjct: 107 AFNGIIPALQAKQCDAIITQLYIKPEREKVVDFV-PYMYASNTLVVSAEKGEGIKGVADL 165

Query: 144 SGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            G     Q GTT    LA   K        K    +F +  +     R    D+Y    +
Sbjct: 166 CGKKAAAQTGTTVADHLAAQSKKCRADGRQKVDIRLFNKDTDALQQLRLGLVDSYGT--T 223

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              A  +   +P    +  +  ++  +  A  + DT  ++ ++    A+
Sbjct: 224 LETAAYVMKQQPGTFALAGEPFNRVKVGAATRKDDTALHDALTKAFAAL 272


>gi|158424108|ref|YP_001525400.1| amino acid ABC transporter solute-binding protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330997|dbj|BAF88482.1| amino acid ABC transporter solute-binding protein [Azorhizobium
           caulinodans ORS 571]
          Length = 316

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 64/226 (28%), Gaps = 12/226 (5%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A+     +  G LK G++      A    +G  +GF++D    L+  +    +K+     
Sbjct: 53  AATSALAQDAG-LKTGVDGTFAPHAMPNLSGGVQGFNIDLANELAKRLG---TKVTIDAT 108

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQ 142
                   LQ+   D ++         + +  L F          F++ K    I+ +  
Sbjct: 109 QFSGLVPGLQAGTYDFIAAPVTVNK--DRAEQLLFTEGYLNTDFQFVVKKDAPEITKLED 166

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  G+  +    D             +    +   A    R  A     +   
Sbjct: 167 LKGKVIAVNKGSAYDSWARDLADKIGWTVE--SYGTNSDAIQAVLTGRAYANVAGNTVSA 224

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                        +     +    A  + + +    N +      M
Sbjct: 225 ---WAVKNNPAIKLSYLHSTGLVWAIPVRKDNVALRNKLDAAIECM 267


>gi|294789675|ref|ZP_06754908.1| extracellular solute-binding protein, family 3 [Simonsiella
           muelleri ATCC 29453]
 gi|294482387|gb|EFG30081.1| extracellular solute-binding protein, family 3 [Simonsiella
           muelleri ATCC 29453]
          Length = 286

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 74/253 (29%), Gaps = 23/253 (9%)

Query: 4   DFFVSILCLIILFF-----TSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKAN 53
            + +S++CL+         TS       +        K+  ++     +    FA     
Sbjct: 26  IYLISLVCLLSACAEQQQTTSEPAPTQTINAPRNQTAKQESYVVV-SQSSYPPFATRDET 84

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G D+D   A++         ++++P +      +L     DI++   + T  R+  
Sbjct: 85  GKMVGLDMDILNAIAEK---QGFTLKFIPHDMDGLLESLNEDGADIVATGVNITPERQK- 140

Query: 114 LGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F            +   K      S L      VQ+ + +E  L +      +   
Sbjct: 141 -KYDFSQPYLEASWVALVNKDKVKAHQWSDLKNKKFVVQSSSLSETQLKNTA----ISAD 195

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  + V    AA      DA     S L              I+ +   + P      +
Sbjct: 196 VLPLKTVYLGVAAVGKGDADAIYDVDSVLDTYL--KPNTPFIKIVDEESGRIPFGFVFKK 253

Query: 233 GDTEWYNIVSWTH 245
           G+      +    
Sbjct: 254 GNLPLKTKIDQGL 266


>gi|269219462|ref|ZP_06163316.1| ABC-type amino acid transport system, secreted component
           [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211041|gb|EEZ77381.1| ABC-type amino acid transport system, secreted component
           [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 296

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 88/298 (29%), Gaps = 39/298 (13%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGD---------------------------IKK 32
           M +    V++ C  +L   S  +    + D                            K 
Sbjct: 1   MLRKTRVVAVACACMLALASCGSADDAVRDYNQSDIAVFDASSVRADPKIAAMVPRAAKA 60

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
            G L  G N         +      G+++D  RA+++ +  D    +    +   R    
Sbjct: 61  DGKLTIGSNLYYAPADFKQGE-TPVGYEMDVMRAVAARMGLDLEIQESSFDSILPRIP-- 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
             K+ +  +     T  R  +  +             +        +   + G +I VQ 
Sbjct: 118 --KRYEAGASAFTITNERTANFNM--IQYYEVGTSWAVAAGNPSKFTPGSICGRTIGVQT 173

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  + T+A   K  + +     ++  E +  A    + +A T D S +           
Sbjct: 174 GTLQDETVAKTAKKCHKQPTIQRYDAQENVTLALSGGKIEAMTADSSVINYAIHRAK--G 231

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDT 268
                  I+ K+P    + + D      +  +  +++    L       NI++     
Sbjct: 232 ALEAAGPIMEKAPQGIVVSKDDPALTAAIQASLQSLMDDGTLKKIFKSWNIDENIASK 289


>gi|75674349|ref|YP_316770.1| extracellular solute-binding protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74419219|gb|ABA03418.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 306

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 66/219 (30%), Gaps = 16/219 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++    T    F     +G+  GF+VD  R L   I              +    AL S
Sbjct: 76  VIRFLTETDYPPFNYTGPDGNPAGFNVDLARTLCEEI---KVTCTIQMRRFETLVDALSS 132

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQA 152
            + D L  +   T   E+   + F    Y     F+              L G  + V A
Sbjct: 133 NRGDALIASLAVTP--ELRKRIDFTDPYYRTPARFVSRRDAAMAEVRPEYLEGKKVGVVA 190

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  E  L  +F           +   E +  A R +  D   GD  +L       D  S
Sbjct: 191 GSAHEAYLKVFF----TDAELHGYPNDETLRQALRQNEVDFIFGDAISLAFWINGTDSES 246

Query: 213 E-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +        +  A+ +G+      ++W  +
Sbjct: 247 CCAFSGGPFIESRYFGEGIGIAVRKGNDVLRQALNWALF 285


>gi|254482044|ref|ZP_05095286.1| Bacterial extracellular solute-binding protein, family 3 [marine
           gamma proteobacterium HTCC2148]
 gi|214037734|gb|EEB78399.1| Bacterial extracellular solute-binding protein, family 3 [marine
           gamma proteobacterium HTCC2148]
          Length = 234

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 72/218 (33%), Gaps = 15/218 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L+ G++         + +G + G + D  +A+   +     +I+ + +       A
Sbjct: 4   AAGTLRVGMSADYPPLHFKQ-DGRFAGIEADSAKAVGKIL---SRRIEIVQIPLDGLVSA 59

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQ---LSGAS 147
           L + ++D+L      T  R  S  + F            +   K G  S           
Sbjct: 60  LHAGKVDVLMSGLSVTAER--SQQVLFAEPYLRVGQMAIMHKSKVGRFSQPWAVYRENVR 117

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V+ G+T                    FE  E+   A R    D Y  D    + L   
Sbjct: 118 VGVKTGSTGAAFAQRELP----DAIVSEFENSEQAFEALRKDAIDMYIHDAPTSWQLANG 173

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            +   + + L   +++  LA A+ + D    + ++   
Sbjct: 174 MEN-DDLISLYSPLTEEMLAWAVRKDDEALVSELNRAL 210


>gi|330821200|ref|YP_004350062.1| ABC transporter extracellular solute-binding protein [Burkholderia
           gladioli BSR3]
 gi|327373195|gb|AEA64550.1| ABC transporter extracellular solute-binding protein [Burkholderia
           gladioli BSR3]
          Length = 276

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 83/248 (33%), Gaps = 12/248 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           K++FV+ +   ++F       ++  L  ++ +G +          F  ++ +G   G D 
Sbjct: 4   KNWFVNAVASCVVFAACADAASALTLEQVQAKGVMTVATEDDFRPFEFIQ-DGKPAGLDN 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
                L  +      +I+   +        + + + D+   +   T  R  +L       
Sbjct: 63  ALLEQLRKSSG---FRIEQNIIPWSGLLPGVTTGKYDVALTSVVVTPERAKTLDFTMPVA 119

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFE 177
                   + + +  I SV+ L+G  + VQAG  +   LAD               + + 
Sbjct: 120 DATQYY-VVRNGETRIKSVADLAGKVVGVQAGGGSYAALADLGKTLAAHGGQVGKVVQYA 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E        R D        +    L ++ P    +   + + +  A A+ +G+T  
Sbjct: 179 SFPEAYQDLSNGRLDYVING--VVNLTSLVHEHPDRFRMGTAVGAPTYAAWAVAKGNTTL 236

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 237 LRYLNSFL 244


>gi|282857984|ref|ZP_06267186.1| putative extracellular solute-binding protein family 3
           [Pyramidobacter piscolens W5455]
 gi|282584201|gb|EFB89567.1| putative extracellular solute-binding protein family 3
           [Pyramidobacter piscolens W5455]
          Length = 250

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 52/169 (30%), Gaps = 6/169 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            R  L+    +    +  +   G+  GFD D    +   +      +     +      +
Sbjct: 21  ARADLRVATASTYPPYEFLNEKGELDGFDKDLMEEIGRRLG--EKIVWLDTGHYDMVIPS 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + + D+++     T +R     + F          F+      +  +  L G   CV 
Sbjct: 79  LVTDRADVIAAGMSATPIRAK--RVLFSTPYVPTMASFVTAPNVAVKKLEDLRGLRGCVP 136

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            GTT ++ L               F ++EE        R D    D+  
Sbjct: 137 VGTTQDVFLTPLAGELGF--QIKNFAKIEECLWDIVTGRSDFTLMDVPV 183


>gi|152971503|ref|YP_001336612.1| extracellular solute-binding family protein 3 [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956352|gb|ABR78382.1| putative bacterial extracellular solute-binding protein, family 3
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 268

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 82/267 (30%), Gaps = 21/267 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           V++   +   F+  +  A +L +    G  K G+      F    +N +  G D +F   
Sbjct: 13  VALTLAVSACFSPVTQAAELLTE----GVFKVGMEVTYPPFESYDSNNNIVGLDPEFAAL 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +   P  I     +          K+ D +      T  R+              G
Sbjct: 69  IAQHLQAKPQLIDTKFTSLILGI----GKKYDAVISGMYVTPERQKQAD---AIPYALSG 121

Query: 127 QGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERV 179
              I  K   +   +  +L G  + +QAGTT   +L         K          F   
Sbjct: 122 ASIIALKGGAVQPKTEDELCGVKVGLQAGTTWVTSLKKHSDEWCLKNGKPAITIQEFPTA 181

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +    A      A   + +   R    +    ++   PL   + +G+TE   
Sbjct: 182 PEASQALLSKNIGAQLEIAPA-AQIIVDKSRGRLAISSTRLVYPLPLGIYVAKGNTELAE 240

Query: 240 IVSWTHYAMVTAEELG--ITQKNINQV 264
            +      +    +    I + N+  +
Sbjct: 241 AIKAALATLKANGQYAALIKKYNLESI 267


>gi|269103819|ref|ZP_06156516.1| amino acid ABC transporter amino acid-binding portion
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163717|gb|EEZ42213.1| amino acid ABC transporter amino acid-binding portion
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 251

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    +      S S  A+          +K G++     F  VK +   +GF+
Sbjct: 1   MKISQSLRFAAITFALIGSSSIFAAT--------EVKVGMSGRYFPFTFVKQD-QLQGFE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + +      +  K+ ++  N    F  L++ +ID +S     T   E      F  
Sbjct: 52  VDLWQEIGKR---NDYKVDFVTANFSGLFGLLETGRIDTISNQITITP--ERQNKFLFSQ 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG   ++ K    I+S S L+G ++ V  G+  E  L      +  + +   ++  
Sbjct: 107 PYVIDGAQLVVRKGNNAITSTSDLNGKTVGVNLGSNYEQLLRQL--PNADQINIKTYDTG 164

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R D +  D  +   +    + P +    P    ++    +  +   +   
Sbjct: 165 IE--HDVALGRTDTFVMDRLSSLEVIKKVNLPLQLAGQPFEQIENAWPFSRTEKGKKLQQ 222

Query: 240 IVSWTH 245
            V+   
Sbjct: 223 EVNQAL 228


>gi|169828293|ref|YP_001698451.1| histidine-binding protein [Lysinibacillus sphaericus C3-41]
 gi|168992781|gb|ACA40321.1| Histidine-binding protein precursor (HBP) (p29) [Lysinibacillus
           sphaericus C3-41]
          Length = 273

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 28/253 (11%)

Query: 34  GFLKCGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIFDDPSKIQYL 81
           G  + G+  G   F       ANG  K         G+DV   + ++  +  +   +  +
Sbjct: 31  GEFRIGMEAGYPPFNWTQQNDANGAVKIADNAEYAGGYDVQMAKKIAEGLGKE---LVIV 87

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138
            L       ALQS +ID +      T  R+ +  + F    Y      ++ K      + 
Sbjct: 88  KLEWDGLVPALQSNKIDAIIAGMSPTEERKKT--IDFTENYYTSDFVMVIKKGSKYEGVK 145

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S+   SGA I  Q  T+    +      +         E    +  A  A + D Y  + 
Sbjct: 146 SIQDFSGAKITSQLNTSNYNVIDQIKGVNKQT----AMESFPAMRVALEAGKIDGYVAER 201

Query: 199 SALYALKLTNDRPSEHVI---LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +    ND+ +           +S + +A  + + D      ++     +   +   
Sbjct: 202 PEGISAAAANDKFTYVAFEEGFDTDLSNTSIAVGLRK-DDANLEKINEILKGISEDDRQA 260

Query: 256 ITQKNINQVSKDT 268
           I ++ I+Q     
Sbjct: 261 IMEEAISQQPAAQ 273


>gi|83952548|ref|ZP_00961279.1| ABC polar amino acid transporter, periplasmic binding protein
           [Roseovarius nubinhibens ISM]
 gi|83836221|gb|EAP75519.1| ABC polar amino acid transporter, periplasmic binding protein
           [Roseovarius nubinhibens ISM]
          Length = 277

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 11/213 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              ++      A  K +G  +GF+VD    +   +  +   +  +          LQ+  
Sbjct: 27  TVALDGTFAPHAMPKLDGGIEGFNVDLANEIGKRLGAE---MNIVATQFSGILPGLQAGT 83

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTT 155
            D +   T  T  R  +  L F          F++      I+ + + +G  I V  G+ 
Sbjct: 84  YDFVVAPTTITEER--ANNLLFSEGYLNTDFQFVVKAGTPEITDLKEFNGKVIAVNKGSA 141

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +    +             F    +   A  + R  A     +        N    E  
Sbjct: 142 YDSWARELADEIGWTVE--SFGSNTDAVQAVISGRAFANVAGNTVSAWAAKKNPN-IETS 198

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            L              + DTE  + V      M
Sbjct: 199 FLYSTGKV--WGMPFRKEDTELRDTVENVIECM 229


>gi|150016543|ref|YP_001308797.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903008|gb|ABR33841.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 279

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 101/287 (35%), Gaps = 35/287 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFA 48
           M K   + ++   I     F+ N               L  IK++G L     +    F 
Sbjct: 1   MKKIVALIVIVNFICRIIGFTVNINEVVRVDNLIEKDRLQTIKEKGNLTVAAASSDPPFY 60

Query: 49  EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDW 106
            +       +G D D    +S+ +    +K+ +      E    L++   IDI S     
Sbjct: 61  FLDINTQKVRGIDADIINEISNRL--KINKVDFKSTVFSELLQRLKTDENIDIASGGMYI 118

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
              RE     +F    Y + +  I+ K   I+    L  A + V+ GT     LA  +K 
Sbjct: 119 IPEREK--EASFTHPLYAETEAVIVPKASKINFKEDLKNAVVGVEKGTIYLE-LAQKWKT 175

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +     +F+ + E+  +    + DA   D   L   K   D  +  +   D  S   +
Sbjct: 176 AGLIKDIEIFQSISELLDSINNGKIDAGIADS--LVVNKDLKDNTNLFLKTLDDYSPELI 233

Query: 227 ---APAIIQGDTEWYNIVSW---------THYAMVTAEELGITQKNI 261
                A+ + D    N+++          T YA++   E G+ + NI
Sbjct: 234 GNVGIAVRKNDNTLLNVLNEKIDEMKADGTMYAILK--ENGLDKNNI 278


>gi|186473937|ref|YP_001861279.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184196269|gb|ACC74233.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 285

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 78/257 (30%), Gaps = 22/257 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILG--DIKKR------GFLKCGINTGLVGFAEVKAN-- 53
                +LC +     + + +A       + ++        +K G++     +A       
Sbjct: 5   KAIKLLLCAVTGLLLAQAASAQSCEPSKVAQKYPSLAGKTIKIGVDPESPPYAFRDGKDF 64

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               G D D  RA+ +          +          AL++ QID++     +T  R   
Sbjct: 65  NKIIGADADMARAVFACAGVKTE---FFTAGWPGLLPALRAGQIDVMWDLLYYTPERAK- 120

Query: 114 LGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGAS----ICVQAGTTTELTLADYFKAHN 168
              +F         G +     K I  +S+L G +    I     T  +   A     + 
Sbjct: 121 -ETSFVTYMQAGTGGLVAAGNPKRIDDISRLCGLTVTAGIGTVELTMAQAQGAKCKAENK 179

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                +    +        +HR D    D++ +  L      P  +     + S   +  
Sbjct: 180 PDVTIMTSADIASGARLVASHRADVMMYDLALVDGLAKQ--NPQLYTRGFMVTSGMKIGV 237

Query: 229 AIIQGDTEWYNIVSWTH 245
            + +G+ +    VS   
Sbjct: 238 GVKKGNADMIAAVSDGL 254


>gi|320531677|ref|ZP_08032617.1| Tat pathway signal sequence [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136097|gb|EFW28105.1| Tat pathway signal sequence [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 348

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 72/216 (33%), Gaps = 13/216 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK--- 77
             +     +K+   L  G       F+   +      GFD    +AL+  I         
Sbjct: 61  AASPWAAAVKQANKLVTGGTKTSEVFSWEDSKTKKISGFDAAIAQALARYIIGGDDARSL 120

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++   + A  R   L +  +  +      T  R     + F    Y   Q  ++      
Sbjct: 121 LEVQQVTADTRETVLTNGTVKAVIATYTITPERAK--KIDFAGPYYASSQAILVKADNQD 178

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +        + VQ+ +++   L  +    N K     F+   +  AA  + +  AY  D
Sbjct: 179 ITGVDTLTGDVAVQSNSSSAAALKKHAPKANAK----PFDTQAKCVAAVESGQVKAYVVD 234

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            S L +  L+ND+     I+ +  ++ P    + + 
Sbjct: 235 QSLLKSEVLSNDK---VKIVGETFAEDPYGIGLPKD 267


>gi|302337317|ref|YP_003802523.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634502|gb|ADK79929.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 321

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 80/255 (31%), Gaps = 22/255 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFAEVK 51
           K   +  + L +   +                   +  I  RG +    N     +    
Sbjct: 11  KFLCLGAMVLFLGGCSGGGQQEQKSAGQPLVERNTIATILDRGQINITFNLAAERYQFKD 70

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            N +  G  +D  + +++ +  D   +     + +    +L + + D L+     T  R 
Sbjct: 71  KNNEPAGMAIDLAKMIAANLDVD---LVMTDTSWEGLIPSLLTDKSDFLATTMSTTFARA 127

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNM 169
             +           G      +   I++   L+  G  I   AGT +    ADYF     
Sbjct: 128 QQVLFTSEDWY-ITGVSIWTKEGNAINNWQDLNDSGRRIGAVAGTVSAEVAADYFPEA-- 184

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAP 228
                 F+   ++  A    R DA   D      + L        +  P +++     A 
Sbjct: 185 --EIQTFQIDTDVWEALVTGRIDAGMNDNIFKNTVALNYSGKLTLLTTPRELVKTDTWAY 242

Query: 229 AIIQGDTEWYNIVSW 243
           A+  GD   ++ +++
Sbjct: 243 AVRPGDEFMWHYLNF 257


>gi|161503631|ref|YP_001570743.1| hypothetical protein SARI_01712 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864978|gb|ABX21601.1| hypothetical protein SARI_01712 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   +  +  + L  T+            +   L+ G++            G+  GF 
Sbjct: 1   MFRKVRILTMTGLFLLATAGHA---------EPKVLRVGVDLTNPPLQVRDQCGNPTGFV 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL   I     K  Y+  +   +   L ++++D +      T  R  S+   F  
Sbjct: 52  IDITNALCQTI---NVKCHYVVNSFDAQIPELLARKVDFIMP-LGVTPKRRASIA--FSR 105

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y D    +  K   I    ++L G +I V+ G+  E     Y+           +  +
Sbjct: 106 YVYHDPTVLVARKTVNILPQAARLKGKNIAVEQGSIQETWANTYWLPAG--VVIKSYPDM 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234
             I       R D       AL    L   +     +    ++ + L     A  I + D
Sbjct: 164 TSIYQDLVTGRLDGALCPAIALKFGFLQTAQGKAFEVKGSAVTDTHLFSIGSAYGIRKED 223

Query: 235 TEWYNIVSWTH 245
                +++   
Sbjct: 224 EATQRLINQGL 234


>gi|110632377|ref|YP_672585.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110283361|gb|ABG61420.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 279

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 81/270 (30%), Gaps = 28/270 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGF---------LKCGINTGLVGFAE 49
           ++   +IL  ++         A        D K+R           L+    T    F  
Sbjct: 2   RNCLSAILAFMLAASVGQPVLAQSDLPSFWDGKQRLVKPDTAGLQRLRFLTTTDFFPFNF 61

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           + A+G   G  +D  RA+ S +     + Q   L  +E   AL+  + + +      T  
Sbjct: 62  LDADGRLNGLHIDLARAICSEL-GMLDRCQIQALPFEELEPALERGEGEAVIAGLAITEE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAH 167
           R     L F          F+  K   +       +SG  + V  GT  E  L D F   
Sbjct: 121 RRR--KLLFSHSFLMFPARFVARKDTQMGEPIYEAVSGKRVGVAEGTAHETMLRDLFAEA 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL- 226
                 + F    E+  A    + DA  GD   L    L++        +          
Sbjct: 179 ----EIVGFSEEAELTRALAEGKVDAIFGDGMRLSFWLLSDGAKGCCSFVGGAYMAPEYL 234

Query: 227 ----APAIIQGDTEWYNIVSWTHYAMVTAE 252
               A A+     +      +     + A+
Sbjct: 235 GQGLAIAVEGDRPQLAQAFDYALQ-QIEAD 263


>gi|311107289|ref|YP_003980142.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Achromobacter xylosoxidans A8]
 gi|310761978|gb|ADP17427.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Achromobacter xylosoxidans A8]
          Length = 302

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 81/273 (29%), Gaps = 30/273 (10%)

Query: 8   SILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVGFAEVKAN 53
            +  L +    + S + S               L   K  G ++ G       FA + + 
Sbjct: 9   LLAALSLGVLAACSDSGSDKAAPAASAPAAASTLEAAKAAGKIRIGY-ANEAPFAYMDSK 67

Query: 54  G-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G  V+  R +   +  +   ++ +          LQ+K+ DI++     T  R  
Sbjct: 68  EAKVTGESVEIARVVLKRMGINE--VEGVLTEFGSLIPGLQAKRFDIIAAGMYVTPER-- 123

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              +AF   TY  GQ F++ +     + S   +              +      K     
Sbjct: 124 CQQVAFSDPTYGVGQSFLVKQGNPKNLHSYEDVMKNPDAKLGVVVGAIEAEYASKIKVPP 183

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISAL--------YALKLTNDRPSEHVILPDIIS 222
              +VF       +  +A R DAY      +         A  L    P +  ++     
Sbjct: 184 AQVVVFPDAVSALSGVQAGRADAYAATALTVNDLMGKTSAASGLEKADPFKDPVIDGKDV 243

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +   A A    D  + +  +      +  EE  
Sbjct: 244 RGYGAYAFRSDDKAFADAFNAELAKFIGTEEHQ 276


>gi|293192921|ref|ZP_06609765.1| ABC-type amino acid transport system, secreted component
           [Actinomyces odontolyticus F0309]
 gi|292819977|gb|EFF78976.1| ABC-type amino acid transport system, secreted component
           [Actinomyces odontolyticus F0309]
          Length = 314

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 14/230 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  ++K+RG L+ G +        +  +    +G+DVD  +AL+  +  +       
Sbjct: 60  AALVPDEVKERGTLRNGASADYAPAEFLGDDLQTPQGYDVDINKALAKVMGLNEGTTN-- 117

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSV 140
                    AL + + D+   +   T  RE    L         G  + +          
Sbjct: 118 HAEFPTIIPALGT-KFDVGISSFTITSEREEQANLI---SYVEVGSAYGVAAGNPKNFDP 173

Query: 141 SQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +   G +I VQ GT  E    +           K   +  +   +I       + DA   
Sbjct: 174 TDPCGKTIGVQTGTAQEDYATELSEQCVADGKDKITIMPHDLQTDIATKVIGGQYDATFA 233

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D S +               + D++  +P   A+ + D +    +     
Sbjct: 234 D-STVIGYTANLSSGK-IEQVGDVVESAPQGVAVNKNDEQLTQAIQKAMQ 281


>gi|116692522|ref|YP_838055.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|116650522|gb|ABK11162.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 317

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 60/185 (32%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  GI   L   +          GFD D  + +S ++      I     +      AL
Sbjct: 68  GTLTIGIAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRKLKIIALAWADWPL---AL 124

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASIC 149
           +S ++D +  N   T  R+      F      D  GF +    K + I     ++G  I 
Sbjct: 125 ESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQAIREPKDVAGLRIV 181

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT  E  L  + + +            ++       A ++ R DA     S L    
Sbjct: 182 TDAGTNQEKILLAWDRENVAHGLKPVQIQYYDDQAMRIVAVQSGRADAVFSVNSVLAYQS 241

Query: 206 LTNDR 210
               +
Sbjct: 242 AQQGK 246


>gi|319653945|ref|ZP_08008039.1| prephenate dehydratase [Bacillus sp. 2_A_57_CT2]
 gi|317394481|gb|EFV75225.1| prephenate dehydratase [Bacillus sp. 2_A_57_CT2]
          Length = 269

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 75/216 (34%), Gaps = 11/216 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80
             A+ L +I +RG+++ G+      F  +     +++G+DVD  + L   +  +   +Q+
Sbjct: 33  AAATQLDEIIERGYIRIGMTGDYKPFTYLNPKTNEYEGYDVDAAKELGKDLGVE---VQF 89

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +     +    LQ+ + DI          R+ +  ++   I++          K    ++
Sbjct: 90  VSTTWPDMLKDLQADKFDIAVGGVTRNTARQKNAYVSQGYISFGKVPLIRAEDKDKYLTI 149

Query: 141 SQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             ++     I V  G T E  +  Y    N      V +   +I         D    D 
Sbjct: 150 EDINKPSVRIGVNPGGTNESFVRQYLSNAN----VTVVQNNLDIPGLVADGTYDVMITD- 204

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +    L    D      +     + S     I +GD
Sbjct: 205 TVEAMLYARKDERLYAALTDKPFTNSEKGYMIPRGD 240


>gi|146276918|ref|YP_001167077.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555159|gb|ABP69772.1| extracellular solute-binding protein, family 3 [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 241

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 68/241 (28%), Gaps = 23/241 (9%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G       +  +   G+  G++ +    L            ++          LQS 
Sbjct: 24  VRMGTEGAYPPYNFINDKGEVDGYERELGDELCKRA---NLTCTWVKNEWDSIIPNLQSG 80

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
             D +      T  RE    + F           +      IS  + + G  +  Q GT 
Sbjct: 81  NYDTIMAGMSITEEREEV--IDFTQNYIPP----LASAYAAISPDADIEGGVVAAQTGTI 134

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +A+           + F   EE  AA R    DA   D   L              
Sbjct: 135 QASHVAE------SGATLLEFATGEETVAAVRNGEADAVFADKDFLVPFV-NESNGEFTF 187

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
           +  D+     +   + + DTE     +    +M            IN + +     ++Q 
Sbjct: 188 VGEDVPLGGGVGMGVRKSDTELKEKFNAAIQSMK-------DDGTINAMIRKWFGDEIQT 240

Query: 276 F 276
           F
Sbjct: 241 F 241


>gi|152995787|ref|YP_001340622.1| histidine kinase [Marinomonas sp. MWYL1]
 gi|150836711|gb|ABR70687.1| histidine kinase [Marinomonas sp. MWYL1]
          Length = 578

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 12/201 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     +     +G+  G+ V+  +A++  +      ++    + +     L S 
Sbjct: 34  ISVGADYNFPPYEFAGEDGEPTGYTVELTKAIAEVMG---VHVEIEMADWQSILKGLHSG 90

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
             DIL          E +  + F              K    I+ VSQL    + VQ  +
Sbjct: 91  HFDILQG---IAYSDERAQNILFSSPHSIINYSIFARKNSPSINDVSQLKNKEVIVQNAS 147

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSE 213
                L D    +N++   I  +  EE      + + D A T +  +LY  K        
Sbjct: 148 IMHEYLLD----NNIQAIIIPVKTHEEALRLLASGKHDYALTANSPSLYLSKEMKLNNIH 203

Query: 214 HVILPDIISKSPLAPAIIQGD 234
            +  P    +          +
Sbjct: 204 AIASPISGQRLSYGALQKNEE 224


>gi|239905208|ref|YP_002951947.1| sensor histidine kinase [Desulfovibrio magneticus RS-1]
 gi|239795072|dbj|BAH74061.1| sensor histidine kinase [Desulfovibrio magneticus RS-1]
          Length = 605

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 71/204 (34%), Gaps = 11/204 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     +  +  NG   GF+VD  RA+   +     ++++   +  E   AL   
Sbjct: 67  VVVGGDRDYPPYEYLDKNGQPAGFNVDLARAIGEVMG---MRVEFRLGSWAEMRQALLDG 123

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154
           ++DIL     ++  R  +  + F P +          K + +  S+  L+G  + +    
Sbjct: 124 EVDIL-EGMSFSEER-AAEEVDFAPPSAVVNHAIFARKGERLARSLDDLAGKKVIIHRR- 180

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + D   A   +   I+ +   +      +   D +           + +++    
Sbjct: 181 ---GYMHDQLAARGYEQDLILTDTPADGLRLLASGVGD-FAVVAMLPGNYIIRDNKLDNI 236

Query: 215 VILPDIISKSPLAPAIIQGDTEWY 238
            ++   ++      A+ +G+    
Sbjct: 237 EVVARSVATLRYGFAVKKGNEALL 260


>gi|167760762|ref|ZP_02432889.1| hypothetical protein CLOSCI_03147 [Clostridium scindens ATCC 35704]
 gi|167661649|gb|EDS05779.1| hypothetical protein CLOSCI_03147 [Clostridium scindens ATCC 35704]
          Length = 277

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 16/231 (6%)

Query: 1   MYKDFFVSILC--LIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANG 54
           M K     +LC  + I      +   S         K    +K G      G+ +    G
Sbjct: 1   MNKKAISILLCFGMCITMLAGCNQKDSSKETEEQSSKDEKVIKVGCEATTPGWIQTDKKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+D D    +          I+Y  +     +      ++D +     +T  R    
Sbjct: 61  ELSGYDYDVWTEIGERTGYK---IEYKIMEWDGMWSMFDDGRLDSIGEQISYTTERAQKY 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHP 173
            ++                   + S+  L  G +I  ++ T+ E+ L      + +   P
Sbjct: 118 NMSEPYAYNIYSL-LCAKDNGELQSMDDLKDGMTIACESNTSDEIVLKAIEDEYGVTLKP 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
             F+ +          RCD +    ++        D      IL D     
Sbjct: 177 TYFDGMS--VQEVALGRCDLWPRARTSCETTIEEVDN---LKILGDTNRVE 222


>gi|238762249|ref|ZP_04623221.1| Extracellular solute-binding protein, family 3 [Yersinia
           kristensenii ATCC 33638]
 gi|238699596|gb|EEP92341.1| Extracellular solute-binding protein, family 3 [Yersinia
           kristensenii ATCC 33638]
          Length = 294

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 101/273 (36%), Gaps = 27/273 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K   +S +    L   +     ++  S+L   K +  L  GI      +  +  +G
Sbjct: 1   MKLNKTLSLSGILSASLLLNAAWSFNASAQSLLDKAKSQQPLIAGIANEQ-PYGYIGTDG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G +V+  RA+  ++    ++I+   ++       L +K+ D++         R   +
Sbjct: 60  KATGANVEVLRAVLKSLG--ITQIETPIVDFGALVPGLAAKRFDVIGAGLFINPARCKVI 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           G  F       G  FI+ K   ++      V+  + A +  Q GT       D   A   
Sbjct: 118 G--FSNPVTRSGGAFIVKKGNPLNLHSLKDVAANNKARLGTQNGTNQITEAKDSGIAAG- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-------- 221
             + ++F++  E  AA +A R DA     + + +L   ++ P+    LP           
Sbjct: 175 --NVVLFDKDSEALAALKAGRVDAVYFPDAEILSLLKKSNDPTVERALPFQQIPDAHGNP 232

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           S +  A  + + D E+    +     +  + EL
Sbjct: 233 SYNYHAFGLPRNDPEFIQAFNAELAKLRASGEL 265


>gi|189210036|ref|XP_001941350.1| ABC-type amino acid transporter [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187977443|gb|EDU44069.1| ABC-type amino acid transporter [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 288

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 90/282 (31%), Gaps = 35/282 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFA 48
           M     ++  CL+I+ F S S+              SIL  I+ RG+LK G       F+
Sbjct: 1   MNPALKLTAACLLIISFASASSTPPITTSFEHGNITSILDRIQARGYLKVGTTGDYKPFS 60

Query: 49  EVKA-----------NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
                          N  + G D+D  + LS ++   P  I+++P         + +++ 
Sbjct: 61  YKVTNRTALPGTSAINTTYIGADIDLAQTLSDSLSL-PHPIEFVPTIWANLTADVTAQKF 119

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAG 153
           DI       TL R  +    F       G+   +           +    +G  + V  G
Sbjct: 120 DIAMTGVSITLPR--AQKGFFSTAIQRVGKAACVRCADLAKFSSLAAIDTAGVKVAVNPG 177

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            T E     + + +  K   ++ +    +  A    + DA   DI  +      +     
Sbjct: 178 GTNEA----FDRTNLKKATIVLVQDNNAVYQAVIQGQADAMISDIVEVELQVRLHPETLC 233

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            V      +   L   I   D  W   +    +  + +    
Sbjct: 234 IVNPDQAFTFEELGYMI-GRDVVWKQYLDTFVHVQLGSGNWN 274


>gi|209547563|ref|YP_002279481.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538807|gb|ACI58741.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 314

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 75/235 (31%), Gaps = 38/235 (16%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS------------------ILGDIK-----KRGFLKCG 39
           +      + +  + F S                         + ++K     + G    G
Sbjct: 8   RLLIAGAVTIGAIGFGSAQAQQKFDLSPEQPNRLRVEKNEKRIEEVKDFKFVENGVFTVG 67

Query: 40  IN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           I+    L        +    G+DVD  +A++ ++     K+  + +   +  L L S + 
Sbjct: 68  ISSSGNLPLHDYASDSKTVIGYDVDLAQAIADSLG---LKLNLVSVAWADWPLGLTSGKF 124

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGT 154
           D +  N   T  R+      F      D  GF +     I        ++G  +   AGT
Sbjct: 125 DAVISNVTVTEERK--QKFDFS-TYRKDELGFYVKADSPITALKQPKDIAGLRVITDAGT 181

Query: 155 TTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYALK 205
             E  L ++ + +    +K   + +   + +   A ++ R DA     +      
Sbjct: 182 NQEKILLEWDRQNVAAGLKPIEVQYYDDDAVKDLAVQSGRADAVFSVNATQAYAA 236


>gi|220911893|ref|YP_002487202.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
 gi|219858771|gb|ACL39113.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
          Length = 266

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 14/225 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
                 +         +A G   GFD++    ++  +  +P    ++          L S
Sbjct: 39  KFTIATSGTFRPITFSEA-GKLTGFDIEVGTLIAEKLGMEPE---FVEGQLTGLLPGLNS 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            + D +      T  R+    + F      DG   ++ K    +  +S+L G  +    G
Sbjct: 95  GKFDAVMSGLTMTDARK--QSITFSTPYLADGAVAVVKKDNTKVEQLSKLDGLVVGAIGG 152

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           + TE  +               +    E  A   A R + +     A       +   SE
Sbjct: 153 SGTESDVKGI----GGFTELKAYPGAPEGFADVAAGRIEVFATGRIAAENFMKNSPLASE 208

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWT---HYAMVTAEELG 255
             I+ D+    P    + + DTE    V        A  T EEL 
Sbjct: 209 LKIVGDVYGTKPAGVGLPKDDTEMKPKVDKIIEELKADGTLEELN 253


>gi|312959070|ref|ZP_07773589.1| ABC lysine/arginine/ornithine transporter [Pseudomonas fluorescens
           WH6]
 gi|311286840|gb|EFQ65402.1| ABC lysine/arginine/ornithine transporter [Pseudomonas fluorescens
           WH6]
          Length = 260

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 19/254 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + +   ++L   + + +         +G ++ G+      F      G   G +++   A
Sbjct: 6   IGVALALLLSVGTVAADE------HPQGEIRFGVAALFPPFQSRNPQGQLVGLNIELGNA 59

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L + +     +  ++     E F AL++++ D +      T  R      +F    Y   
Sbjct: 60  LCAQL---NRRCTWVDQVQVEDFRALEARRFDAIM-GMAPTSERRRW--ASFTDNLYPFT 113

Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              +  ++ G + S   L G  + V  G+  E      +           F   +++  +
Sbjct: 114 TRLVARRRSGLLPSAKSLKGKRVGVLLGSNREAFAHSKWAPRG--VIVKSFWLNDDLVRS 171

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWYNIV 241
             A   DA       +  + L  +   +   + D ++ + L      A+ + DT   N +
Sbjct: 172 LVAGEIDATLQGTVEIRQVLLDTEAGQDFDFVGDPVTAALLGDGVAIAVRRPDTALRNAL 231

Query: 242 SWTHYAMVTAEELG 255
           +    A+    E  
Sbjct: 232 NRALEALKKNGEYQ 245


>gi|224542317|ref|ZP_03682856.1| hypothetical protein CATMIT_01496 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524766|gb|EEF93871.1| hypothetical protein CATMIT_01496 [Catenibacterium mitsuokai DSM
           15897]
          Length = 247

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 20/257 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V ++ L+ +  T   ++++       +  L  G++     +       +  GFD
Sbjct: 1   MKKLLSVVLVMLLAVGMTGCGSSSN------GKTELLIGVSPDYPPYESYNNKKEVVGFD 54

Query: 61  VDFCRALSSAIFDDPSK--IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           VD  + L   +  +      ++ PL+      ++ S Q+D+      +    +    + +
Sbjct: 55  VDMTKELVKIMNKNGGNYSYKFKPLSFDAISSSITSDQVDLGISGFTY---HKEWKNILW 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   Q  ++      S VS L G  I  Q G+T      D   A          + 
Sbjct: 112 SHAYNTSEQIALVKGDSTFSKVSDLEGKKIGAQLGSTGVDAAKDIKGAK-----VTTVQN 166

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            + +    ++   D+   D +                ++ + + K        +G+ +  
Sbjct: 167 AKILVETLKSGGLDSVVLDGAVAENYVKNAG----LKMIDEPLIKEENMIITKKGNDKLM 222

Query: 239 NIVSWTHYAMVTAEELG 255
             V+      V +++  
Sbjct: 223 KDVNKAVDEFVKSDKYN 239


>gi|187735937|ref|YP_001878049.1| polar amino acid ABC transporter, inner membrane subunit
           [Akkermansia muciniphila ATCC BAA-835]
 gi|187425989|gb|ACD05268.1| polar amino acid ABC transporter, inner membrane subunit
           [Akkermansia muciniphila ATCC BAA-835]
          Length = 494

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 82/258 (31%), Gaps = 15/258 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G +          +     N    G D +  R ++     +   +    ++      A
Sbjct: 28  ENGRILMVTEATFPPYEFRDGN-AILGIDPEIMREVAQRTGRE---LVIEDMSFDSVITA 83

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S + D+ +     T  R     + F        Q  I+ K   I     + G  I VQ
Sbjct: 84  VVSGKADVAASGITVTPERRR--KVDFSIPYVEAAQVIIVPKGSPIRKREDIRGKRIGVQ 141

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G T ++ +            P  F       AA  A + DA   D          NDR 
Sbjct: 142 HGATGDIYVTRNI------QQPERFPNGALAVAAVAAGKVDAAVIDQDPATMYVAGNDR- 194

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               ILP+ ++    A A+ +GDT     ++ T  A+  + +L   +     +   +   
Sbjct: 195 --LEILPEPLTSESYAIAVRKGDTALLQDINGTIAALKASGKLEEIRNAYAAMQVKSAAG 252

Query: 272 DVQRFLGIDKSSNIGEAL 289
             Q   G     NI   L
Sbjct: 253 PEQHASGGGWLENIWLDL 270


>gi|323227501|gb|EGA11661.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
          Length = 199

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 12/193 (6%)

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   AL   +    ++  +          AL+ ++ D +    D T  R   +   
Sbjct: 1   GFDIDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA-- 55

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F     +     ++ KK    + + L G  I ++ GTT +  L D           + ++
Sbjct: 56  FSNPY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYD 110

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDT 235
             +      +  R D   GD + +     TN +  P+   +       + L  A+   + 
Sbjct: 111 SYQNAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNK 170

Query: 236 EWYNIVSWTHYAM 248
                ++    A+
Sbjct: 171 SLLEKLNNALAAI 183


>gi|270291410|ref|ZP_06197632.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus acidilactici 7_4]
 gi|270280256|gb|EFA26092.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus acidilactici 7_4]
          Length = 495

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 29/264 (10%)

Query: 1   MYK-----DFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFA 48
           M K     ++   I  L ++            +T       I++RG++  G +     + 
Sbjct: 7   MRKEKTFFNWLFIIFSLCLISTGVDIADTVHATTKDPTYQRIRERGYIVLGTSPDYAPYE 66

Query: 49  EV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+   + ++  +      ++   ++     + LQ+ ++D++     
Sbjct: 67  FQTSSNGKSKDVGMDISVAKDIAHDLGVK---LKIKNMDFDSLLVGLQTGKVDMVLSGM- 122

Query: 106 WTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                     + F  + Y  GQ   I  K   +                 + +  LA   
Sbjct: 123 -NPSAARRKSVDFSNVYYQGGQSIIINQKDGHLFKDKNSFHQRKVAAQTGSIQYNLA--- 178

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS---ALYALKLTNDRPSEHVILPDII 221
           K           E+  ++  A + ++ D    +     A  A        + H  L D  
Sbjct: 179 KKQIKGASVRGIEKGTDLILALQTNKVDGIVMEKPTAEAYAANNQGLKILNAHFKLNDDE 238

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
           + +  A A+ +G       ++ T 
Sbjct: 239 TST--AVALPKGSPVLKAKINQTI 260


>gi|329944507|ref|ZP_08292672.1| Tat pathway signal sequence domain protein [Actinomyces sp. oral
           taxon 170 str. F0386]
 gi|328530272|gb|EGF57151.1| Tat pathway signal sequence domain protein [Actinomyces sp. oral
           taxon 170 str. F0386]
          Length = 354

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 72/216 (33%), Gaps = 14/216 (6%)

Query: 23  NASILGD-IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK--- 77
            AS     +KK G    G       F+   +      GFD    +AL+  I         
Sbjct: 61  AASTWAAAVKKAGKFVTGGTKTSEVFSWEDSKTKKISGFDAAIAQALARYIIGGEDARSL 120

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++   + +  R   L +  ++ +      T  R     + F    Y   Q  ++      
Sbjct: 121 LEVQQVTSDTRETVLTNGTVNAVIATYTITPERAE--KIDFAGPYYASSQAILVKADNKD 178

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +        + VQ+ +++   L  +            F+   +  AA  + +  AY  D
Sbjct: 179 ITGVDSLTGDVAVQSNSSSASALKKHAP----NATAKPFDTQAKCVAAVESGQVKAYVVD 234

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            S L +  L+ND+     I+ D  ++ P    + + 
Sbjct: 235 QSLLKSEVLSNDK---VKIVGDTFAEDPYGIGLPKD 267


>gi|153012129|ref|YP_001373339.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151564017|gb|ABS17510.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 250

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 81/244 (33%), Gaps = 21/244 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M       +  + ++   +    A           +K G +   + F  V        G 
Sbjct: 1   MRLKKIFGLAAMAVIMGGAMPALAQE--------VVKVGSSPTGLPFTFVNTETKAMDGV 52

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  +A+ S I   P    +  +       +L S +ID+++     T  R     + F 
Sbjct: 53  LVDVVKAIESDIGIKPE---FEAVQFSALVPSLTSNKIDMIASAMFITEERAKV--VDFS 107

Query: 120 PITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+G  +         + + L G +I VQ GTT      D FK   +     V++
Sbjct: 108 DPVYGYGEGVFVPVSDDTAYKTYADLKGKTIGVQVGTTFV----DLFKKSGLFSDVKVYK 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTE 236
            + +I A   A R DA  GD             P   +    +  +      A+ +GD  
Sbjct: 164 GIPDIIADVNAGRIDAGFGDGPMAAYYLSQGRFPKVKMVESYEASAGGEFGLALRKGDER 223

Query: 237 WYNI 240
              I
Sbjct: 224 MPKI 227


>gi|163848712|ref|YP_001636756.1| extracellular solute-binding protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222526655|ref|YP_002571126.1| extracellular solute-binding protein family 3 protein [Chloroflexus
           sp. Y-400-fl]
 gi|163670001|gb|ABY36367.1| extracellular solute-binding protein family 3 [Chloroflexus
           aurantiacus J-10-fl]
 gi|222450534|gb|ACM54800.1| extracellular solute-binding protein family 3 [Chloroflexus sp.
           Y-400-fl]
          Length = 265

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 85/248 (34%), Gaps = 25/248 (10%)

Query: 7   VSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +S++ L+   + ++S             D++ RG L+  ++ G   F   +  G   GFD
Sbjct: 13  LSVVVLLAYGWLAWSVQTGTTAIDPVYADLRARGVLRVAVDAGYRPF-VEERGGRLVGFD 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL++ +  +   + ++       +  L S+Q D+++         E      F  
Sbjct: 72  IDLITALANELGFE---VVFVRSGFDALYDQLTSRQADLIASALP--YAPEQGYRARFSQ 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +  G   +      I+ ++ L G  I V  G+  +     +      +  P+     +
Sbjct: 127 PYFDGGLMLLTRNDSTIADLADLRGQRIGVVLGSEGDALAYRFA-----QTTPLHRYTAD 181

Query: 181 EI---DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           E      A +    DA   D         T D     + +   +S  P    +     + 
Sbjct: 182 EAAPLIEALQRGEVDAIILDHVTALGALATGD-----LRIATALSYEPYVLVMPASAFQL 236

Query: 238 YNIVSWTH 245
            + ++   
Sbjct: 237 ESEINRAL 244


>gi|15924848|ref|NP_372382.1| glutamine-binding periplasmic protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927432|ref|NP_374965.1| hypothetical protein SA1675 [Staphylococcus aureus subsp. aureus
           N315]
 gi|156980174|ref|YP_001442433.1| hypothetical protein SAHV_1843 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|13701651|dbj|BAB42944.1| SA1675 [Staphylococcus aureus subsp. aureus N315]
 gi|14247630|dbj|BAB58020.1| similar to glutamine-binding periplasmic protein [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|156722309|dbj|BAF78726.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|285817538|gb|ADC38025.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus aureus 04-02981]
          Length = 441

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 76/240 (31%), Gaps = 17/240 (7%)

Query: 38  CGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            G++           V    ++ G D+D  + ++     +  K++ + ++      AL++
Sbjct: 1   MGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKT 57

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQA 152
            +IDI+      T  R+    + F           ++ K        +   +   +  Q 
Sbjct: 58  GKIDIIISGMTSTPERKK--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQK 115

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-P 211
           GT  E       +            R+ ++  A ++ + +    +     A    N +  
Sbjct: 116 GTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLG 171

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
             +V   +    + +A  + +   +  + ++ T   +     +     N      D +  
Sbjct: 172 ISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 229


>gi|297624653|ref|YP_003706087.1| family 3 extracellular solute-binding protein [Truepera
           radiovictrix DSM 17093]
 gi|297165833|gb|ADI15544.1| extracellular solute-binding protein family 3 [Truepera
           radiovictrix DSM 17093]
          Length = 263

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 64/201 (31%), Gaps = 8/201 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G +T    F  V   G+  GFDVD   A+   I       Q+        F AL +
Sbjct: 41  TLLIGSDTTYPPFETVNQEGEIVGFDVDVMNAICERINC---VAQFQTTAWDGIFAALAN 97

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D+++     T  RE    + F    Y   Q   +       +++     ++ + A T
Sbjct: 98  GEFDMVASGVSITPERE--QIVDFTIPYYEVSQAIAVRVGDEDLTIADFEEGNLVLGAQT 155

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            T   +     A   +    +++       A      D    D     A           
Sbjct: 156 GTTNAMTAERLAG--RERTRLYDTFATAIQALLTGDVDGVVIDDVTADAFAAQYA-GQLV 212

Query: 215 VILPDIISKSPLAPAIIQGDT 235
           V + ++ S   L   + QGD 
Sbjct: 213 VSIREVASGDQLGFVVPQGDP 233


>gi|295397744|ref|ZP_06807815.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Aerococcus viridans ATCC 11563]
 gi|294974030|gb|EFG49786.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Aerococcus viridans ATCC 11563]
          Length = 276

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 16/267 (5%)

Query: 1   MYKD--------FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K            +   ++    ++ +T+        +   +  G   G   F  +  
Sbjct: 1   MKKKPTFIRWGLLTFAATAVLAACGSAEATDEGAAASNSEAETVVVGTGNGYQPFVYLDE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG+  G+DV    A+   +  D    +Y   + K    +L + +ID+ +   ++   R  
Sbjct: 61  NGELTGYDVAVLEAIDEKL--DDYSFEYESSDFKNILTSLSAGKIDLAAHQYEYNDERAE 118

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                    T +      +   +  +++  L G  +    G+     L  Y   H     
Sbjct: 119 KYLYGEVGYTDYTLYIVNIAGDEQYATLDDLQGKKVFASPGSNVAYLLEQYNSEHENADE 178

Query: 173 PIVFERVEEI----DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
            I     E       +  +    DA               D   E    P  +SK+    
Sbjct: 179 QISIIYNESASEIFVSGLQNGTADAGILTKYDTNKYNEQFDANLEIASEPISVSKTY--F 236

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
              + D E    V      ++ A  L 
Sbjct: 237 LYDKADEELKEAVDGALQELIDAGTLA 263


>gi|29840029|ref|NP_829135.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila caviae GPIC]
 gi|29834376|gb|AAP05013.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Chlamydophila caviae GPIC]
          Length = 259

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 65/223 (29%), Gaps = 12/223 (5%)

Query: 33  RGFL-KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           R  L   G N     F  +  NG   GFD+D   A+S  +       ++   +     L 
Sbjct: 29  RDKLWIVGTNATYPPFEFIDENGKVVGFDIDLAEAISKKLDKQLKVTEF---SFDALILN 85

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICV 150
           L+  +ID +      T  R+  + +             I  +      +  LS   S+ V
Sbjct: 86  LKKHRIDAILAGMSITRSRQKEIAMIPYHGEGVCQLTVISKQPLSKEDILPLSKHSSVAV 145

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GT  E  L               F+   E+     + +      + S    +      
Sbjct: 146 QTGTFHEDYLLSL-----SGVKVRSFDSTLEVLMEVGSKKSPVAVLEPSVARVVLKEFPD 200

Query: 211 PSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                I LP+          I +   E    V       + AE
Sbjct: 201 LYTTTIDLPEDWWVLGCGLGIAKDRPEHLEEVQKALDE-LQAE 242


>gi|307255257|ref|ZP_07537072.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259692|ref|ZP_07541415.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861806|gb|EFM93785.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866232|gb|EFM98097.1| ABC transporter arginine-binding protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 244

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L   +      F      G+  GFDVD   A+   I    +   +          A
Sbjct: 23  QAKDLTFAMEPSYPPFELTNEKGEIIGFDVDIANAICKEI---QANCSFKSQAFDGLIQA 79

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           ++ K+ID      D T  R   +   F    Y     FI  K K   + +     ++ VQ
Sbjct: 80  VKQKRIDGAISAIDVTEARAKQVA--FTDAYYDSSASFIAVKGKADLNTA----KNVGVQ 133

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +  +    K    +Y P  +  +++     +  R D   GD + L  +       
Sbjct: 134 NGTTFQQYVLAEAK----QYAPKAYASLQDAVLDLKNGRIDIIFGDTAVLADMLSKEAEL 189

Query: 212 SEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +       + L  A+ + ++E    ++     +    E  
Sbjct: 190 SFVGDKVTNKKYFGNGLGIAVNKSNSELVAELNKGLATIKANGEYQ 235


>gi|300858346|ref|YP_003783329.1| hypothetical protein cpfrc_00928 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685800|gb|ADK28722.1| putative secreted protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206064|gb|ADL10406.1| Serine/threonine-protein kinase PknD [Corynebacterium
           pseudotuberculosis C231]
 gi|302330614|gb|ADL20808.1| Putative ABC superfamily ATP binding cassette transporter, binding
           protein [Corynebacterium pseudotuberculosis 1002]
 gi|308276300|gb|ADO26199.1| Serine/threonine-protein kinase PknD [Corynebacterium
           pseudotuberculosis I19]
          Length = 298

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 80/285 (28%), Gaps = 41/285 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDI----------------KKRGFL 36
           M     V  LC  I    S S         +     ++                 ++G L
Sbjct: 1   MKSRTRVLALCTAITLAFSLSACVTNEEQGHPDGWEEVSPPAVPEIAALVPQPLAEKGTL 60

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
               N     F    ++ +  G ++D  RA SS +      I+    +      +L +  
Sbjct: 61  VASANPPFAPFEFKNSHHEIIGMEMDLMRAASSVMGLKYQPIE---QDFSLILPSLSAGT 117

Query: 97  IDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ID+ +        R       F          G    +       +   G SI VQ  T 
Sbjct: 118 IDVGASGFTDNEERRK--NYDFVDFLYAGVQWG---QQVGSSVDPNNACGLSIAVQRTTV 172

Query: 156 TELTLA-----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +  +      D           + +E  ++   A    R DA+  D   L       + 
Sbjct: 173 ADTDIVRPLSDDCVAQGKKPIELLAYETSDQAATALVLGRADAFVADSPVLAWAISRAEG 232

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             E   +  I   +P   A+ +  ++    ++     ++   +  
Sbjct: 233 KLE--TVGSISDAAPYGFAVPK-KSQLGVALAAAMQHLIKTGDYQ 274


>gi|262402083|ref|ZP_06078647.1| amino acid ABC transporter amino acid-binding portion [Vibrio sp.
           RC586]
 gi|262351729|gb|EEZ00861.1| amino acid ABC transporter amino acid-binding portion [Vibrio sp.
           RC586]
          Length = 248

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 81/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF++D    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKKD-ELQGFEIDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDSIKGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  + K  N K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSHDK--NGKINIKTYDTGIE--HDVALGRADAFVMDRLSALDLIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|262050150|ref|ZP_06023004.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30]
 gi|262052687|ref|ZP_06024879.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3]
 gi|259159436|gb|EEW44488.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3]
 gi|259161775|gb|EEW46363.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30]
          Length = 441

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 76/240 (31%), Gaps = 17/240 (7%)

Query: 38  CGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            G++           V    ++ G D+D  + ++     +  K++ + ++      AL++
Sbjct: 1   MGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKT 57

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQA 152
            +IDI+      T  R+    + F           ++ K        +   +   +  Q 
Sbjct: 58  GKIDIIISGMTSTPERKK--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQK 115

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-P 211
           GT  E       +            R+ ++  A ++ + +    +     A    N +  
Sbjct: 116 GTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLG 171

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
             +V   +    + +A  + +   +  + ++ T   +     +     N      D +  
Sbjct: 172 ISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 229


>gi|254421360|ref|ZP_05035078.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196188849|gb|EDX83813.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 843

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 84/232 (36%), Gaps = 13/232 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQ 79
             S+L +I++ G LK  +      F  + ++ +W G+   F   L + +        +++
Sbjct: 583 EESVLAEIERTGVLKVALRKDASPFGYIDSDDNWVGYCHRFATDLQAHVDQTVGSQVEVE 642

Query: 80  YLPLNA--KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
            + +++    RF  +Q +   +          RE   G+ F       G  F++ +    
Sbjct: 643 LVRISSTLDSRFSLVQDETAHVECGPNTI---REDIEGVNFSSPLAVSGTQFLVPRGTID 699

Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              +  +L G  + V + TTT   + + F   N+   P    R  E  +A      D   
Sbjct: 700 SEDANPRLDGLRVAVLSNTTTAQFVEETFPQANVVSFPGPIGR-SEAISALGMGEVDVVA 758

Query: 196 GD--ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            D  +S    L+         V+    ++      A+   D EW  +++   
Sbjct: 759 SDGILSISELLRQNLSLADYAVVPERPLTCEFYGLALPNNDQEWQTMINNFL 810


>gi|326803801|ref|YP_004321619.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651293|gb|AEA01476.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 548

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 25/193 (12%)

Query: 34  GFLKCGINTGLVGFAEV------------KANGDWK-GFDVDFCRALSSAIFDDPSKIQY 80
           G L+ G+      +                A+G++  G+DV   + ++ A+     K++ 
Sbjct: 52  GVLRVGMEANYAPYNWSQTTDANGAIEISNASGEYANGYDVQIAKQIADALG---LKLEI 108

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--- 137
           + +       ALQS +ID +      T  RE    + F    Y      +  K       
Sbjct: 109 VKMEWDGLPPALQSAKIDAIVAGMSPTPEREK--QIDFTDEYYGSDMVVVTLKDGPYANA 166

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S++  +GA +  Q  T     L                +    + ++  +++ DAY  D
Sbjct: 167 QSINDFNGAKVTAQLNTFHVDLLDQMQGIDKQT----PMDSFPTMISSLLSNKIDAYISD 222

Query: 198 ISALYALKLTNDR 210
                +    N  
Sbjct: 223 RPGALSAVAANPD 235


>gi|308449227|ref|XP_003087895.1| hypothetical protein CRE_07965 [Caenorhabditis remanei]
 gi|308252035|gb|EFO95987.1| hypothetical protein CRE_07965 [Caenorhabditis remanei]
          Length = 762

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 61/203 (30%), Gaps = 11/203 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                  +T    F      G   G D+D   A++     +  +++   L  +    A+ 
Sbjct: 74  KKFVIATDTTFAPFEFR-EGGKLVGIDMDLLNAIAEK---EDFQVEIQSLGFQAAVSAVT 129

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S Q D +      T  R+      F    +  G    + K   +     L G ++  + G
Sbjct: 130 SGQADGVIAGMSITDERK--QTFDFSDPYFDSGVQMAVAKNSDVKGYDDLKGKTVVAKGG 187

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E       + +         ++   +  + +     A   D      LK    + + 
Sbjct: 188 SEGESEAKKLSEKYGF--TVKALDQSTSLIESVKNGSAAAVFDDYPV---LKYGIAQGNG 242

Query: 214 HVILPDIISKSPLAPAIIQGDTE 236
             ++ D I       A+ +G   
Sbjct: 243 LKVVTDKIPGGQYGFAVAKGKNA 265



 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 64/219 (29%), Gaps = 11/219 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
                  +T    F     +G   G D+D    ++     +  ++    L  +    A+ 
Sbjct: 313 KKFTIATDTTFAPFEFR-KDGKLVGIDMDLLNRIAKE---ENFQVDVQSLGFQAAVSAVT 368

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S Q D +      T  R+      F    +  G    + K   +     L G ++  + G
Sbjct: 369 SGQADGVIAGMSITDERK--QTFDFSDPYFDSGVQMAVAKNSDVKGYEDLKGKTVVAKGG 426

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E       + +         ++   +  + +     A   D      LK   ++ + 
Sbjct: 427 SEGESEAKKLSEKYGF--TVKALDQSTSLIESVKNGSAAAVFDDYPV---LKYGIEQGNG 481

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             ++   I       A+ +G             A + A+
Sbjct: 482 LKVVTAKIPGGQYGFAVAKGKNADLLEAFNNGLARMKAD 520


>gi|116254672|ref|YP_770508.1| putative substrate-binding ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259320|emb|CAK10455.1| putative substrate-binding ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 314

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 38/233 (16%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS------------------ILGDIK-----KRGFLKCG 39
           +      + +  + F+S                         + +IK     + G    G
Sbjct: 8   RLLIAGAVTMAAIGFSSAQAQQKFDLSPEQPNRLRVEKNEKRIAEIKDFKFVENGVFTVG 67

Query: 40  IN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           I+    L        +    G+DVD  +A++ ++     K++ + +   +  L L S + 
Sbjct: 68  ISSSGNLPLHDYASDSKTVIGYDVDLAQAIADSLG---LKLELVSVAWADWPLGLTSGKF 124

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGT 154
           D +  N   T  R+      F      D  GF +        I     ++G  +   AGT
Sbjct: 125 DAVISNVTVTEERKE--KFDFS-TYRKDELGFYVKADSPIAAIKQPKDIAGLKVITDAGT 181

Query: 155 TTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYA 203
             E  L ++ + +    +K   + +   + +   A ++ R D      +    
Sbjct: 182 NQEKILLEWDRENVAAGLKPIEVQYYDDDAVKDLAVQSGRADTVFSVNATQAY 234


>gi|257870618|ref|ZP_05650271.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804782|gb|EEV33604.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 528

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 90/307 (29%), Gaps = 43/307 (14%)

Query: 1   MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KA 52
           M K      FF     L+ +  T+ + + +           + G+  G   F       A
Sbjct: 1   MKKMNWFWAFFALCFTLVNVSMTAHADDQTPADQ------FRVGMEAGYAPFNWTQTTDA 54

Query: 53  NGDW-----------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           +G              G+DV   + ++  +  +   +  +         ALQS  ID + 
Sbjct: 55  HGAVPISGEKGSAYAGGYDVQIAKKIADGLGKE---LVIVKTQWDGLAPALQSGTIDAVI 111

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTEL 158
                T  R     + F    Y      ++ K        S++ L+GA I  Q  T    
Sbjct: 112 AGMSPTAER--REQIDFTDPYYESNLVVVVQKDGKFANAKSLADLTGAKITAQLNTFHYT 169

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +    +    +      +    +  A  +   D Y  +          N          
Sbjct: 170 VIDQIPEVQKEQ----AMKDFSSMRVALASGIIDGYVSERPEGVTATGANPDLKMIEFAE 225

Query: 219 DIISKS-----PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
               ++      +A  + +GD +    V+     +  +E   +    I +   DT+    
Sbjct: 226 GQGFETNPEDVQVAVGMRKGDPD-VQKVNEILATIPQSERTKLMDAAIEEQPADTSGDSA 284

Query: 274 QRFLGID 280
            + L  D
Sbjct: 285 NQGLLAD 291


>gi|50121084|ref|YP_050251.1| ABC transporter substrate binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49611610|emb|CAG75058.1| ABC transporter, substrate binding protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 327

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 35  FLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +           A +   N    G + D  R ++ ++     ++  +P + ++  L + 
Sbjct: 80  TVAIATLGSSPPLAFLADDNKTVVGSEPDIARLVADSLG---LELNIVPTSWEDWPLGVA 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S + D    N   T  R+      F      D  GF +     I S      ++G  I V
Sbjct: 137 SGKYDAAIINITVTKERKE--KFDFA-TYRIDSLGFYVKSTSKIQSIKEAKDIAGLKIIV 193

Query: 151 QAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +GT  E  L  + K +       + PI        + + ++ R DAY G        K 
Sbjct: 194 GSGTNQEAVLLAWDKQNRANGLPAFQPIYVTDDAAANLSLQSGRSDAYFGPNVIGA-YKA 252

Query: 207 TNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                 +HV   +    +   +A    +  +     ++     ++ + E  
Sbjct: 253 ELTGKVKHVGTVNGGYPNVAHIAVTTRKS-SGLVQPINTALNGVIKSGEYD 302


>gi|270263326|ref|ZP_06191596.1| arogenate dehydratase [Serratia odorifera 4Rx13]
 gi|270043014|gb|EFA16108.1| arogenate dehydratase [Serratia odorifera 4Rx13]
          Length = 255

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 72/237 (30%), Gaps = 6/237 (2%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             ++  S L  + ++G L+         +  +K +G ++G D+    +L+ ++    +K+
Sbjct: 14  GSASAQSHLDKVTQQGTLEVCTTGDYKPYTFLKEDGSYEGIDIAMAESLAKSLG---AKV 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +++  + K       + + DI       TL R+    + F      DG+  ++       
Sbjct: 71  KWVKTSWKTLTPDFVAGKCDIAMGGISVTLQRQK--QVFFADKLDTDGKIPLVRCTDVKK 128

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             +        V+       T   +  A+       +      I       + D    D 
Sbjct: 129 YRTVEQINKASVRLLEPAGGTNEAFVHAYLPDAKLTLTHDNVGIFQQLVDKKADVMITDA 188

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S     +    +         +      A  + + D  W   V    +      E  
Sbjct: 189 SEALYQQKHYPKLCAVNPDKPLQYGE-KAYMLPRDDLSWKQYVDQWLHLAKATGEYQ 244


>gi|54293661|ref|YP_126076.1| hypothetical protein lpl0714 [Legionella pneumophila str. Lens]
 gi|53753493|emb|CAH14948.1| hypothetical protein lpl0714 [Legionella pneumophila str. Lens]
          Length = 250

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 23/249 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F   +L       +        +        L  G+      F     N +  G+D
Sbjct: 1   MK--FIQGLLLSFFFLVSPLHAQNEPIP-------LIVGVGGFYPPFIMQGTNNELFGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +     L   +     +  +  +  ++   AL +KQID+       T  R  S  + F  
Sbjct: 52  IATMTELCKIM---KRQCNFQVMRFRQLIPALINKQIDVAISAMSITSER--SSLVNFSM 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   F+ +K         L    G  I V+  T     +        +    + F+
Sbjct: 107 PYLLSYSRFLTNKIHNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRM---GIIDPVIVEFD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
           R EE+  A  A++ D    D     AL  + +     +++   +     L  A+ + ++ 
Sbjct: 164 RTEEMLEALSANKIDFVLMDNP--AALYWSANSSGRLLVIGSPMLVGYGLGIAVNRENSV 221

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 222 LLKSLNDAL 230


>gi|326410786|gb|ADZ67850.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella melitensis M28]
          Length = 162

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  ++L     S  A +    K+   ++         F  +  +G   GFD
Sbjct: 1   MLKSLVLAGLASVVLTV---SVQAPV--QAKEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           +D   AL  A+    +K   +  +       LQ+ + D +  +   T  R+  
Sbjct: 56  LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQ 105


>gi|209547159|ref|YP_002279077.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538403|gb|ACI58337.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 310

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 12/233 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAK 86
             IK  G LK   +      +    +G   G D D   AL   +  D   +Q   +    
Sbjct: 58  ASIKASGTLKVATDLT-PPISFHDDDGKLVGIDADIAAALGVILGLD---VQMTDVGAGA 113

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLS 144
               A+ SK+ D+     +  +  E  +         +D    +  K     I S+++L 
Sbjct: 114 AIVPAILSKRFDMTISGINDDVELEKQVD---VIDYMYDATTIMTIKDNPLGIKSMAELC 170

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYA 203
           G  + V  GT     +           + +   ++ ++  A R  R DA      +++Y 
Sbjct: 171 GKKVAVPVGTFQGKMVEAASAKCQTPINIMAIPKMPDVLQAVRTGRADATVNGYATSVYT 230

Query: 204 LKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +           LPDI  +   L     + + E  + V      MV +    
Sbjct: 231 TEHQTGNGKGLQALPDIRLAVGYLGMLTAKDNPELRDTVVAALQQMVDSGAYE 283


>gi|160897315|ref|YP_001562897.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160362899|gb|ABX34512.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 306

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)

Query: 5   FFVSIL---CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60
             ++++     ++      +    +L  +     LK  I     G     A  G   G D
Sbjct: 45  LLLALVPVWVAVLAMGPGAARAGEVLDRVASSHTLKVCIWPDYYGITYRDARTGRLTGID 104

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L+  +    +++Q++  +       L   + D+          R     L F  
Sbjct: 105 AELSAELAKDLG---ARLQHVDSSFSRLVPDLLESRCDVAMFAVGILPQR--QQQLRFTQ 159

Query: 121 IT-YFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                D  G        + S       G  + VQ GT  E  + +  +      H ++ E
Sbjct: 160 PYLSSDIYGITTKSNPAVRSWAEIDQPGVQVAVQRGTFMEPVMRESLR----HAHLVLVE 215

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +  +    A R D +  D      L L +    + +  P      P   A    D +W
Sbjct: 216 PPQTREKELMAGRVDVFMTDYPYSRKL-LDSSDWVQLIAPPKPFHVLPYGYAASPADAQW 274

Query: 238 YNIVSW 243
              ++ 
Sbjct: 275 LARLNQ 280


>gi|258622957|ref|ZP_05717972.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
 gi|258584740|gb|EEW09474.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
          Length = 248

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 80/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF++D    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKKD-ELQGFEIDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDSIKGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  +    + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSH--DKDSKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|89899049|ref|YP_521520.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89343786|gb|ABD67989.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 248

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 76/249 (30%), Gaps = 24/249 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M +   +  LCL+ +   + +              L+ G     + F  +        G 
Sbjct: 1   MSRLLRLFTLCLVFIGSLASAQAP-----------LRVGSTPSGIPFTFLDTKTNKISGV 49

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD    +          ++   +       ALQ  +ID+++     T  R+    + F 
Sbjct: 50  MVDLISEIGKD---QGFAVEINAMAWGSLIAALQGNKIDVIAAAMYITPPRQEV--VDFS 104

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+G  +         +   L G  + VQ GT     L     A  +     V++
Sbjct: 105 DPIYTYGEGLFVAASDAKDYKTYEDLKGEVVGVQIGTAYVKPLQ----ASGLFKEVKVYD 160

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTE 236
            + +I       R  A  GD   +         P    V     +    +  A+ +GD  
Sbjct: 161 SISDIMRDVNLGRIKAGFGDYPIVAYQLGQGAFPETRLVKGYKSVWVGSVGIAVRKGDKA 220

Query: 237 WYNIVSWTH 245
             + ++   
Sbjct: 221 TIDKINAAL 229


>gi|299134036|ref|ZP_07027229.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
 gi|298590783|gb|EFI50985.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
          Length = 308

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 70/218 (32%), Gaps = 16/218 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++    T    F     +G+  GF+VDF RAL   I              +    A+ + 
Sbjct: 79  IRFLTETDYPPFDFTGPDGNPAGFNVDFARALCEEI---KVPCTIQMRRFETLVDAINTG 135

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAG 153
           + D +  +   T   +I   L F    Y     F+    + ++      L+G  + V +G
Sbjct: 136 RGDAVIASIAMTP--DIRTKLDFTDPYYRAPARFVSRAGEVLADVRPENLTGKKVGVISG 193

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L   F         + F   + + +A R    D   GD  +L       D    
Sbjct: 194 SAHEAYLKALF----TDALAVGFPSEDAMRSALRRGEVDLIFGDAISLGFWINGTDSAGC 249

Query: 214 -----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                   +        +   + +G+      ++W  +
Sbjct: 250 CAFSGGPFVESRYFGEGIGIGVKKGNDVLRQALNWAMF 287


>gi|164686604|ref|ZP_02210632.1| hypothetical protein CLOBAR_00196 [Clostridium bartlettii DSM
           16795]
 gi|164604333|gb|EDQ97798.1| hypothetical protein CLOBAR_00196 [Clostridium bartlettii DSM
           16795]
          Length = 289

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 85/297 (28%), Gaps = 35/297 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEV- 50
           M K   + ++  + L                N S   D       + G+  G   F    
Sbjct: 1   MKKRMSLLLVIAMSLAMLVTGCGSSSNSSSANESSGSDSGSSDEFRVGMECGYAPFNWTQ 60

Query: 51  --KANGDWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
              +NG  K         G+DV   + ++  +      +  +         A+QS +ID 
Sbjct: 61  SDDSNGGVKVEGNDEYAGGYDVQIAQKIADELGKK---LVIVKTEWDGLVPAVQSGKIDA 117

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTE 157
           +      T  R+    + F  + Y      ++ K     + ++LS        G   T  
Sbjct: 118 IIAGMSPTAERKE--SIDFTDVYYTSDLVMVVKKGGKYENATKLSDFKGATITGQLNTFH 175

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
            T+ D              +    +  A  + + D Y  +     +    N   +     
Sbjct: 176 YTVIDQIDGVKKDT---AMDNFPAMRVALESGKIDGYVSERPEGVSATSANKNFAMVEFA 232

Query: 218 PDIISK---SPLAPAII-QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
                K      A A+  + D++  + ++     +   E   +  + I        N
Sbjct: 233 DGQGFKTSDEDTAIAVGLKKDSDLKDKINKILAGISEDERKDLMDQAIKDQPASEDN 289


>gi|55821630|ref|YP_140072.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737615|gb|AAV61257.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus LMG 18311]
          Length = 284

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V  IL L ++   +          +  ++  +    ++    F   K + D+KG
Sbjct: 9   MKKWLAVMGILGLSVMTLAACGNKGDS--KVSGEKQTITVATDSDTAPFTFKKGD-DFKG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  +A+      D  +++++          + S +  I + + ++   R  +   +F
Sbjct: 66  YDIDLVKAVFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEER--AQKYSF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                      I  +    +S+  LSG +  V  GT     L ++  A+  K   
Sbjct: 122 SDPISRSNYAIISAEGTKYTSLDDLSGKTTEVLPGTNYAQLLENWNHANADKTPI 176


>gi|307320668|ref|ZP_07600081.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306893703|gb|EFN24476.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
          Length = 259

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 10/218 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +  +G   GF VD  R +   +  +  K Q   +   E   AL+  
Sbjct: 28  LRFLTTVDFPPFNFIDQSGKLSGFHVDLAREICRELEIEA-KCQIQAVTYPELMPALEQG 86

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q + ++     T         +   +               I+  + L+G  + V +GTT
Sbjct: 87  QGEAIAAGIAVTSELRQRFAFSRAFMQLPARFVVNTKAAGAITGPADLAGKPVGVVSGTT 146

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E  L  +F           F   + + +A R     A   D   L      N       
Sbjct: 147 HEAMLKAFFPK----LEAKGFSDRDALLSALRGGTVAAAFSDGMQLSFWVSGNLAGGCCA 202

Query: 216 ILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           +L             L     + +      +     A+
Sbjct: 203 MLEGSYFSQRFLGEGLTIMNRKAEPALTQAIDHALLAL 240


>gi|77463944|ref|YP_353448.1| ABC basic amino acid transporter, solute-binding protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|126462778|ref|YP_001043892.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|221639800|ref|YP_002526062.1| family 3 extracellular solute-binding protein [Rhodobacter
           sphaeroides KD131]
 gi|77388362|gb|ABA79547.1| ABC basic amino acid transporter, solute-binding protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|126104442|gb|ABN77120.1| extracellular solute-binding protein, family 3 [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221160581|gb|ACM01561.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
          Length = 241

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 68/242 (28%), Gaps = 23/242 (9%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +   G+  G++ +    L            ++  +       LQS
Sbjct: 23  TVRMGTEGAYPPYNFINDKGEVDGYERELGDELCKRA---NLTCTWVKNDWDSIVPNLQS 79

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  RE    + F           +       S  + + G  +  Q GT
Sbjct: 80  GNYDTIMAGMSITEEREKV--IDFTQNYIPP----LASAYASTSPDADIEGGVVAAQTGT 133

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +A+           + F   EE  AA R    DA   D   L      +      
Sbjct: 134 IQAAHVAE------SGATLLEFATGEETVAAVRNGEADAVFADKDFLVPFVNESSGEFTF 187

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           V     +    +   + + DTE     +    +M            IN + K     D+Q
Sbjct: 188 VGEDVPLGGG-VGMGLRKSDTELKEKFNAAIQSMK-------DDGTINAMIKKWFGDDIQ 239

Query: 275 RF 276
            F
Sbjct: 240 TF 241


>gi|312278969|gb|ADQ63626.1| Polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus thermophilus ND03]
          Length = 276

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V  IL L ++   +          +  ++  +    ++    F   K + D+KG
Sbjct: 1   MKKWLAVMGILGLSVMTLAACGNKGDS--KVSGEKQTITVATDSDTAPFTFKKGD-DFKG 57

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  +A+      D  +++++          + S +  I + + ++   R  +   +F
Sbjct: 58  YDIDLVKAVFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEER--AQKYSF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                      I  +    +S+  LSG +  V  GT     L ++  A+  K   
Sbjct: 114 SDPISRSNYAIISAEGTKYTSLDDLSGKTTEVLPGTNYAQLLENWNHANADKTPI 168


>gi|120403686|ref|YP_953515.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119956504|gb|ABM13509.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 237

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 70/220 (31%), Gaps = 10/220 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F  +       G D+D   AL+ A+ ++   I Y   +    F  L +
Sbjct: 3   TLRVGVAYPDPPFNSMPG---RSGLDIDVMTALADALGENAEFIAYDGADFDGIFERLAA 59

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +   T  T  RE         +    G      +   + SV  L+G +I VQ G 
Sbjct: 60  GDYDCVIAGTTVTPARERKAAFLPPYVISGQGLAVDTTRLPHVHSVDDLAGLTIGVQRGN 119

Query: 155 TTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T+E                +  +  +    A   A  CDA       L  L         
Sbjct: 120 TSESIAGRLVADGKAARVRVYDYGAISTAIADLVAGGCDAVMKLAPVLAELV---KDVPG 176

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
             ++   +S   +A A+   D +    +     A    EE
Sbjct: 177 VEVVQRNLSAENIAIAVNPADQQLLARLQV---AQAELEE 213


>gi|15601989|ref|NP_245061.1| hypothetical protein PM0124 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720337|gb|AAK02208.1| ArtI [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 240

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 55/176 (31%), Gaps = 12/176 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +   +      F      G+  GFDVD   A+   I    +   +           L+
Sbjct: 20  KEITFAMEPSYPPFELTNEKGEIIGFDVDIANAICKEI---QATCHFKGQAFDSLITGLR 76

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           SK  D      D T  R     ++F    Y     FI  K K            + VQ G
Sbjct: 77  SKHFDAAISAIDITEARAK--QVSFSDPYYDSSSSFISVKGKVDDLAQA---KKVGVQNG 131

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           TT +  +    K    +Y P+ +  ++      +  R D   GD + L  +     
Sbjct: 132 TTYQQYIVAEAK----QYQPVPYASLQNAILDLKNGRIDVIFGDTAVLVDMLAKEQ 183


>gi|307307014|ref|ZP_07586753.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306901954|gb|EFN32553.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 259

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 10/218 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +  +G   GF VD  R +   +  +  K Q   +   E   AL+  
Sbjct: 28  LRFLTTVDFPPFNFIDQSGKLSGFHVDLAREICRELEIEA-KCQIQAVTYPELMPALEQG 86

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q + ++     T         +   +               I+  + L+G  + V +GTT
Sbjct: 87  QGEAIAAGIAVTSELRQRFAFSRAFMQLPARFVVNTKAAGAIAGPADLAGKPVGVVSGTT 146

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E  L  +F           F   + + +A R     A   D   L      N       
Sbjct: 147 HEAMLKAFFPK----LEAKGFPDRDALLSALRGGTVAAAFSDGMQLSFWVSGNLAGGCCA 202

Query: 216 ILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248
           +L             L     + +      +     A+
Sbjct: 203 MLEGSYFSQRFLGEGLTIMNRKAEPALTQAIDHALLAL 240


>gi|239834902|ref|ZP_04683230.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239822965|gb|EEQ94534.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 314

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 22/192 (11%)

Query: 27  LGDIK-----KRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           + +IK     K G L  GI+T   L        +    G+DVD  + ++ ++     K++
Sbjct: 50  IEEIKDFKFVKDGVLTIGISTSGHLPLHDYASDSKTVIGYDVDLAQIIADSLG---LKLE 106

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKG 136
            + +   +  + L S + D +  N   T  R+      F      D  GF +    K   
Sbjct: 107 LVSVAWADWPMGLSSGKFDAVISNVTVTEERKE--KFDFS-TYRKDELGFYVKSDSKISE 163

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAY--RAHRC 191
           I S + ++G  +   AGT  E  L ++ + +    +K   + +   ++       ++ R 
Sbjct: 164 IKSPADIAGLRVITDAGTNQEKILLEWDRQNVAAGLKPIEVQYYD-DDAVKDLAIQSGRA 222

Query: 192 DAYTGDISALYA 203
           DA     +    
Sbjct: 223 DAVFSVNATQAY 234


>gi|302531069|ref|ZP_07283411.1| polar amino acid ABC transporter [Streptomyces sp. AA4]
 gi|302439964|gb|EFL11780.1| polar amino acid ABC transporter [Streptomyces sp. AA4]
          Length = 260

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 90/243 (37%), Gaps = 21/243 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++   ++   T+   +A           L+ G  +     A    NG + GFD
Sbjct: 8   MKKLIVTALAAALVAGLTACGGDAGE--------TLRVGTLSDSRPNAYQ-ENGQFTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  + +++    +  K++++  +      ++ + + DI S     T  R+ ++   F  
Sbjct: 59  NELLKDIAAK---EGLKLEFVSTDFSALLGSVANGRFDIGSSAIAQTEARKKTVA--FSD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +   G       GIS  + L+G  I V  GT ++  LA    A+  K   + F    
Sbjct: 114 PYNYQSLGIEAKATAGISDENSLAGKRIGVVQGTVSDTWLA----ANAPKAQAVRFPNDA 169

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              +A ++   D    D  +       N    E  +   I +  P   A+ +G+TE    
Sbjct: 170 AALSALKSSAIDGAVFDQVSAEDYASKNP---ELKVTKAITTSIPHGYAVRKGNTELLGK 226

Query: 241 VSW 243
           ++ 
Sbjct: 227 LND 229


>gi|77361254|ref|YP_340829.1| transport binding protein [Pseudoalteromonas haloplanktis TAC125]
 gi|123588510|sp|Q3IHZ1|MLTF_PSEHT RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|76876165|emb|CAI87387.1| putative transport binding protein [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 470

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 11/240 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K+  + I+ L++L         S  L  IK +  ++ G       +      G+ +GF
Sbjct: 1   MLKEKLIIIITLVMLLCACDIQEQSTQLAQIKAQNKIRVGTLASASNY-YQAVQGE-QGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +  +A +  +  +   + +  L+  + F  LQS  +D+++    +   R  +    F 
Sbjct: 59  EYELSQAFADYLGVELEIVPFFNLS--DMFARLQSGDLDLIASGLTYNKTR--AQQYRFG 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFER 178
           P      Q  +  +             ++ V A ++  LTL    K++  + +       
Sbjct: 115 PTYRTISQKLVYKQGIERPRDYDDLTGNLMVIAKSSHSLTLQKVKKSNPELNWSETEEFD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            EE+  A      D    D   L   +  +       I   I    P+A  + + + +  
Sbjct: 175 EEELLQAVIDGEIDYTLADTHTLSLFRRYHPN---LSIGFSITHNDPIAWMLRKSNDDSL 231


>gi|50084480|ref|YP_045990.1| amino acid ABC transporter periplasmic substrate-binding protein
           [Acinetobacter sp. ADP1]
 gi|49530456|emb|CAG68168.1| putative amino acid transporter (ABC superfamily, peri_bind)
           [Acinetobacter sp. ADP1]
          Length = 267

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 80/257 (31%), Gaps = 24/257 (9%)

Query: 1   MYKDF-----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M + F      +++    +  F+S S  A +L      G  K G+      F    +N +
Sbjct: 1   MKQTFKNFSCRMALSVAAVTCFSSMSHAAPLL----TNGVFKVGLEATYPPFESYDSNKN 56

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D DF   ++  +   P  I     +          K+ D +      T  R     
Sbjct: 57  IVGLDPDFAALIAKDLNAKPQLIDTKFTSLILGL----GKKYDAVISGLYVTPERLKQAD 112

Query: 116 LAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAH-----N 168
                     G   I  K   I   + + L G  + +Q GT    +L  + +A+      
Sbjct: 113 ---AIPYAMTGASIIALKNSNILPKTENDLCGVKVGLQQGTAWVASLKKHSEAYCIKNGK 169

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + F    E+  A  +    A      A   L     R    V    ++   PL  
Sbjct: 170 PAIQVMEFPTAPEVSQALMSRNVSAQLEIAPAAKILVEK-SRGRLVVSSSRLVYPLPLGI 228

Query: 229 AIIQGDTEWYNIVSWTH 245
            + +G+T   + +  + 
Sbjct: 229 YVTKGNTALVSAIKSSL 245


>gi|254773104|ref|ZP_05214620.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 602

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 77/218 (35%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +G      +   G + GFD    RA++  +     +++++  +       + 
Sbjct: 92  GVLTVGTLSGAPPNVCITPTGQYSGFDNQLLRAIAGKLG---LQVRFVGTDFAGLLAQVA 148

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           S++ D+ S +   T  R     +AF     F     ++     I   + L +G  I V  
Sbjct: 149 SRRFDVGSSSIKATDER--RQTVAFTNGYDFGYYALVVPPGSAIKEFTDLAAGQRIGVVQ 206

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ +     + A+ +  + DA+                  
Sbjct: 207 GTVEESYVVDTL-----HLQPVKYPDFATVYASLKTRQIDAWVAPAGQAATTIQ--PGDP 259

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             V+   I   + +A A+ + +    + ++    A++ 
Sbjct: 260 AVVVANTISPGNFVAYAVAKDNKPLVDALNSGLDAVIA 297


>gi|171318713|ref|ZP_02907855.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171096080|gb|EDT41007.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 313

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 39/235 (16%)

Query: 6   FVSILCLIILFFTSFSTNASIL----------------GDIK---------KRGFLKCGI 40
                 L++L     + +A  L                  IK         ++G L  GI
Sbjct: 11  LSGAFALLVLGVAGIAQSAPSLNLSPDQHDRPRVTPDAAAIKLIPEHFRFVEKGVLTVGI 70

Query: 41  NTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
             G+   +          G D D  + ++  +     K++ +PL   +  LA+ S ++D 
Sbjct: 71  AVGVPPISVYATDAKTIVGADPDLAQLVADELG---LKLKLVPLAWADWPLAVASGKVDA 127

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTT 156
           +  N   T  R+      F      D  GF + +      I     ++G  +   +GT  
Sbjct: 128 VLSNVTVTEARK--QKFDFS-TYRRDVLGFYVEQNSAIKQIREPKDIAGLRVIGDSGTNQ 184

Query: 157 ELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           E  L  + K +        H + ++       A  + R DA     + L      
Sbjct: 185 EKILLAWDKENVAHGLKPIHILYYDDPSVRALALASGRADAIFSVNAVLAYQVSQ 239


>gi|41406150|ref|NP_958986.1| hypothetical protein MAP0052c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394498|gb|AAS02369.1| GlnQ [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 579

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 77/218 (35%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +G      +   G + GFD    RA++  +     +++++  +       + 
Sbjct: 69  GVLTVGTLSGAPPNVCITPTGQYSGFDNQLLRAIAGKLG---LQVRFVGTDFAGLLAQVA 125

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           S++ D+ S +   T  R     +AF     F     ++     I   + L +G  I V  
Sbjct: 126 SRRFDVGSSSIKATDER--RQTVAFTNGYDFGYYALVVPPGSAIKEFTDLAAGQRIGVVQ 183

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ +     + A+ +  + DA+                  
Sbjct: 184 GTVEESYVVDTL-----HLQPVKYPDFATVYASLKTRQIDAWVAPAGQAATTIQ--PGDP 236

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             V+   I   + +A A+ + +    + ++    A++ 
Sbjct: 237 AVVVANTISPGNFVAYAVAKDNKPLVDALNSGLDAVIA 274


>gi|33601143|ref|NP_888703.1| putative extracellular solute-binding protein [Bordetella
           bronchiseptica RB50]
 gi|33575578|emb|CAE32656.1| putative extracellular solute-binding protein [Bordetella
           bronchiseptica RB50]
          Length = 306

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 83/283 (29%), Gaps = 33/283 (11%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTG 43
           M +  FV   +L +      + S + S                L   K  G ++ G    
Sbjct: 3   MRRFNFVKWGLLMVGAGLLAACSDSDSSDPGAAQQPAAQSASTLDAAKAAGKIRIGY-AN 61

Query: 44  LVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              +A + +      G  V+  R +   +  D   ++ +          LQ+K+ DI++ 
Sbjct: 62  EAPYAYMDSKEARVTGESVEIARVVLKRMGIDE--VEGVLTEFGSLIPGLQAKRFDIIAA 119

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R     +AF   TY  GQ F++ K    +  S    A             +  
Sbjct: 120 GMYVTPER--CQQVAFSDPTYGVGQAFLVQKGNPKNLHSYADVAKNGEAKLGVVVGAIEA 177

Query: 163 YFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGD--------ISALYALKLTNDRPS 212
            +           +VF       +   A R DAY                  KL    P 
Sbjct: 178 EYATKQEIPAGQVVVFPDAVSALSGIEAGRADAYAATALTVNDLMHKTSAGDKLEKADPF 237

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +     +   A A  + D  + +  +      V ++E  
Sbjct: 238 TDPTVDGKSVRGYGAFAFRKDDQAFADAFNAELKKFVGSDEHR 280


>gi|225620813|ref|YP_002722071.1| amino acid-binding protein [Brachyspira hyodysenteriae WA1]
 gi|225215633|gb|ACN84367.1| amino acid-binding protein [Brachyspira hyodysenteriae WA1]
          Length = 258

 Score = 85.5 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 85/223 (38%), Gaps = 14/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +I     L+ GI         V +N +  GFD D   ++++    +  K++++P+   E 
Sbjct: 37  NIYSNKTLRVGIYLYDYPMLYV-SNDNINGFDYDIINSIANE---ENLKLEFVPIQFSEL 92

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
             ALQ+  ID++      T  R     + F       GQG I++K    I     L G +
Sbjct: 93  IPALQTNYIDLIIAGMSITEER--KQLVNFSDKYCSSGQGIILNKENDEIKVNDDLIGKT 150

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  GT ++  +++         +   F+       + + ++ DA   D +      + 
Sbjct: 151 VGVIKGTISDNIISEV-----EGVNVERFDVASSALLSLKVNKIDAVMLD-TITCEDYVK 204

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D   +             A A+ + D      ++   +A+++
Sbjct: 205 FDNTIKLAE-NISFKLMDYAIAVRKDDNILLQTINRGLHAIMS 246


>gi|294632493|ref|ZP_06711053.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292835826|gb|EFF94175.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 341

 Score = 85.5 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 67/198 (33%), Gaps = 16/198 (8%)

Query: 23  NASILGDIKKRGFLKCGI---NTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           NA +   ++K G L  G+     G    A V ++     G + D  R +++ +   P   
Sbjct: 72  NAELPAAVRKSGKLVIGVGALPAGFPPLAYVGSDQKTLTGAEPDLGRLVAATLGLKPE-- 129

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
                  +  F+ + S ++D+   N   T  R+      F      D   F   KK   +
Sbjct: 130 -LRNSTWENLFVGVDSGKVDVAFSNVTDTEERKK--KYEFA-SYRQDNLAFEAPKKSTWN 185

Query: 139 SVSQ---LSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                  L+G ++ V +GT  E  L ++         K     ++    I  A  + + D
Sbjct: 186 FGGDYENLAGRTVAVGSGTNQEKILLEWKAKLAKEGKKLTVKYYQDSNSIYLALASGKID 245

Query: 193 AYTGDISALYALKLTNDR 210
            Y G    +         
Sbjct: 246 LYFGPNPGIAYHTRQVAN 263


>gi|300313642|ref|YP_003777734.1| arogenate dehydratase [Herbaspirillum seropedicae SmR1]
 gi|300076427|gb|ADJ65826.1| arogenate dehydratase protein [Herbaspirillum seropedicae SmR1]
          Length = 267

 Score = 85.5 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 68/233 (29%), Gaps = 11/233 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  + K G L+  +      F   + +  ++G DV+  +AL+ ++  +   I+    N
Sbjct: 36  SRLDQVIKAGKLRICMTGDYKPFTYYRPDQSFEGMDVELGQALAKSLGVEAQFIKTTWSN 95

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF--IMHKKKGISSVSQ 142
               F+A    Q DI       TL R      +   +              K     +  
Sbjct: 96  LMNDFIA----QCDIAMGGVSITLDRARKAAFSEPTMVDGKAPIIRCADKDKFRNFDMID 151

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
             G    V  G T E     + +A   +    +      I       + D    D S   
Sbjct: 152 QPGTRAIVNPGGTNE----RFARARYKRATLTLHPDNVTIFQQIVDGKADVMVTDASETL 207

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +         V     +  +  A  + +GD  +   V    +      E  
Sbjct: 208 -WQSKLHPELCPVTPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQ 259


>gi|118464237|ref|YP_879359.1| amino acid ABC transporter permease [Mycobacterium avium 104]
 gi|118165524|gb|ABK66421.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium avium 104]
          Length = 598

 Score = 85.5 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 77/218 (35%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +G      +   G + GFD    RA++  +     +++++  +       + 
Sbjct: 88  GVLTVGTLSGAPPNVCITPTGQYSGFDNQLLRAIAGKLG---LQVRFVGTDFAGLLAQVA 144

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           S++ D+ S +   T  R     +AF     F     ++     I   + L +G  I V  
Sbjct: 145 SRRFDVGSSSIKATDER--RQTVAFTNGYDFGYYALVVPPGSAIKEFTDLAAGQRIGVVQ 202

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ +     + A+ +  + DA+                  
Sbjct: 203 GTVEESYVVDTL-----HLQPVKYPDFATVYASLKTRQIDAWVAPAGQAATTIQ--PGDP 255

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             V+   I   + +A A+ + +    + ++    A++ 
Sbjct: 256 AVVVANTISPGNFVAYAVAKDNKPLVDALNSGLDAVIA 293


>gi|326771649|ref|ZP_08230934.1| glutamate-binding protein [Actinomyces viscosus C505]
 gi|326637782|gb|EGE38683.1| glutamate-binding protein [Actinomyces viscosus C505]
          Length = 326

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 13/210 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83
             +K+   L  G       F+   +      GFD    +AL+  I         ++   +
Sbjct: 67  ASVKQAKKLVTGGTKTSEVFSWEDSKTKKISGFDAAIAQALARYIIGGDDARSLLEVQQV 126

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            ++ R   L +  +  +      T  R     + F    Y   Q  ++       +    
Sbjct: 127 TSETRETVLTNGTVKAVIATYTITPERAK--KIDFAGPYYASSQAILVKADNKDITGVDT 184

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
               + VQ+ +++   L  Y            F+   +  AA  + +  AY  D S L +
Sbjct: 185 LTGDVAVQSNSSSAAALKKYAPKA----TAKPFDTQAKCVAAVESGQVKAYVVDQSLLKS 240

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             L+ND+     I+ +  ++ P    + + 
Sbjct: 241 EVLSNDK---VKIVGETFAEDPYGIGLPKD 267


>gi|260425435|ref|ZP_05779415.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Citreicella sp. SE45]
 gi|260423375|gb|EEX16625.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Citreicella sp. SE45]
          Length = 240

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 52/202 (25%), Gaps = 28/202 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +                        +  ++ G       +  +   G+  GF+
Sbjct: 1   MKKILLGTAALAFSAGMA------------LAQDVVRMGTEGAYPPYNFINDQGEVDGFE 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L S         +++          L S   D +         R+    + F  
Sbjct: 49  RELGDELCSRA---ELTCEWVTNEWDSIIPNLVSGNYDTIIAGMSINDERDEV--IDFTQ 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                           +S  + L+G  +  Q  T     +A+           + F   +
Sbjct: 104 DYIPPATS----SYVALSEDADLTGV-VAAQTSTLQSGYIAE------SGATLLEFATAD 152

Query: 181 EIDAAYRAHRCDAYTGDISALY 202
           EI AA R    DA   D   L 
Sbjct: 153 EIVAALRNGEADAVFFDTDYLA 174


>gi|258626081|ref|ZP_05720932.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
 gi|262172777|ref|ZP_06040455.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           mimicus MB-451]
 gi|258581607|gb|EEW06505.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
 gi|261893853|gb|EEY39839.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           mimicus MB-451]
          Length = 248

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF++D    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKKD-ELQGFEIDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDSIKGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  + K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSHDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|271502166|ref|YP_003335192.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270345721|gb|ACZ78486.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 315

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 83/252 (32%), Gaps = 18/252 (7%)

Query: 34  GFLKCGIN--TGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L   +         A +   N    G + D  R ++ ++     ++  +  + ++  L
Sbjct: 62  GKLTVAVAALGSSPPLAFLADDNKSLIGSEPDIARLVADSLG---LELNLVSTSWEDWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
            + S + D+   N   T  R+      F      D  GF +    K   I +   ++G  
Sbjct: 119 GVSSGKYDVAITNVTVTKARKE--RFDFA-TYRTDTLGFYVKSSSKITAIHNAKDIAGLR 175

Query: 148 ICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L D+ K +       + P+        + + ++ R DA  G       
Sbjct: 176 IIVGSGTNQEAILLDWDKQNRAVGLPPFQPVYVTDAAAANLSIQSGRADATFGPNVTGAY 235

Query: 204 LKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
               N +      +       + +A    +G+      ++     ++   E         
Sbjct: 236 KAALNGQTRLVGTVNGGWPQVAHIAVTTRKGNG-LVTALNTALNGVIQGGEYDQVLNRWG 294

Query: 263 QVSKDTTNPDVQ 274
           +  +  ++ ++ 
Sbjct: 295 EGVERISHSEIN 306


>gi|126667885|ref|ZP_01738851.1| cystine-binding protein [Marinobacter sp. ELB17]
 gi|126627701|gb|EAZ98332.1| cystine-binding protein [Marinobacter sp. ELB17]
          Length = 251

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 20/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++ L ++         + +         K G++     F  V+ + + KGF+
Sbjct: 1   MKFWLINTLMVLSLIVSPQLLAQENPM---------KVGMSGQYFPFTFVEQD-ELKGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   AL   +  +   I +   N    F  L + +ID ++     T  R       F  
Sbjct: 51  VDIMNALGKEMGRE---IIFQTANFSGLFGLLGTGRIDTVANQITITEER--QQAYIFSE 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +DG   ++ +    + SV  L G ++ V  G+  E  L +   A   + +   +E  
Sbjct: 106 PYVYDGAQVVVKQGNTEVQSVEDLKGKTVAVNLGSNFETLLRELPYA--DQINIKTYESN 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E D A    R DA+  D  +   +      P            +       +      +
Sbjct: 164 IERDTAL--GRVDAFVMDRISASQIIKDKPLPLALAGKAFSQITNAYPFQDTETGRALRD 221

Query: 240 IVSWTH 245
            V+   
Sbjct: 222 EVNQAL 227


>gi|319782256|ref|YP_004141732.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168144|gb|ADV11682.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 285

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 73/235 (31%), Gaps = 12/235 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              S +   +   ++++ G L          F  + A+G   G  ++    ++  +    
Sbjct: 20  SGPSGAAKVTKSAEVQQTGMLTVANTLDYAPFEYLDADGKQTGIIIELAGEVAKLVGAKL 79

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KK 134
              +            L + +  +       T  R     + F               KK
Sbjct: 80  DVAR---TPFPSMIPGLAAGRFKVAWETFSATPER--LKQVDFVMFLKAGLAVSTSPDKK 134

Query: 135 KGISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              S  + L G  I V AG+ ++  +     D            VF    +I  A  + R
Sbjct: 135 ASFSGDTPLCGKRIGVSAGSASDFLVDKLSTDCTGKGQAAIEKSVFNSSTDIVQAVLSDR 194

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA   D +   +         + V+LP +   +PL  AI + D E  +++    
Sbjct: 195 VDARMDDAT--ASSYFEVTSKGQLVVLPTLYEVAPLGMAIAKDDKETADMMVGAL 247


>gi|257887913|ref|ZP_05667566.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257893286|ref|ZP_05672939.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257896470|ref|ZP_05676123.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257823967|gb|EEV50899.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257829665|gb|EEV56272.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257833035|gb|EEV59456.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 526

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 81/286 (28%), Gaps = 31/286 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW------- 56
           V++L   +    S  + A+           + G+  G   F        N          
Sbjct: 4   VAVLFAFVFSLFSVGSLANADEK-TPSDEFRVGMEAGYAPFNWSQQTDENNALPIQGQNS 62

Query: 57  --KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+DV   + ++  +      +  +         ALQS +ID +      T  R    
Sbjct: 63  YAGGYDVQIAKKVADGLGKK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERRK-- 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            + F    Y      ++ K        S++ LSGA I  Q  T     +         + 
Sbjct: 118 EIDFTDPYYESQLVVVVQKDGKYAKAKSLADLSGAKITAQLNTFHYTVIDQIPDVQKQQ- 176

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP----L 226
                +    +  A  +   D Y  +          N           D    +P    +
Sbjct: 177 ---AMDNFSAMRTALASGMIDGYVSERPEGVTATSVNKDLEMLEFSGADGFQTNPEDVQI 233

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           +  + +GD +    V+     +   E   I  + +      T + +
Sbjct: 234 SVGMRKGDPDIQK-VNQILSGISNDERTKIMDQAVKDQPAATDSEE 278


>gi|257899437|ref|ZP_05679090.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|257837349|gb|EEV62423.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 526

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 81/286 (28%), Gaps = 31/286 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW------- 56
           V++L   +    S  + A+           + G+  G   F        N          
Sbjct: 4   VAVLFAFVFSLFSVGSLANADEK-TPSDEFRVGMEAGYAPFNWSQQTDENNALPIQGQNS 62

Query: 57  --KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G+DV   + ++  +      +  +         ALQS +ID +      T  R    
Sbjct: 63  YAGGYDVQIAKKVADGLGKK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERRK-- 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
            + F    Y      ++ K        S++ LSGA I  Q  T     +         + 
Sbjct: 118 EIDFTDPYYESQLVVVVQKDGKYAKAKSLADLSGAKITAQLNTFHYTVIDQIPDVQKQQ- 176

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP----L 226
                +    +  A  +   D Y  +          N           D    +P    +
Sbjct: 177 ---AMDNFSAMRTALASGMIDGYVSERPEGVTATSVNKDLEMLEFSGADGFQTNPEDVQI 233

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           +  + +GD +    V+     +   E   I  + +      T + +
Sbjct: 234 SVGMRKGDPDIQK-VNQILSGISNDERTKIMDQAVKDQPAATDSEE 278


>gi|326317548|ref|YP_004235220.1| arogenate dehydratase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323374384|gb|ADX46653.1| Arogenate dehydratase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 260

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 76/239 (31%), Gaps = 10/239 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  I     L+ G       FA +KA+G + G D+D   A++  +      I+Y+ 
Sbjct: 26  AGPRLDRIMDSKVLRVGTPGDYRPFA-IKADGGYAGHDIDVVEAMAKELGVK---IEYVS 81

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    +Q+ + D+        + R   + +      +          K    +++ 
Sbjct: 82  TTWPNLMKDIQADRFDVAVGGITRNVTRIRQIEMLPGYAPFGKVALVRAADKDRFRTLAD 141

Query: 143 LSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           L+   + V      T E  + +  KA          ++  EI A     + D    +   
Sbjct: 142 LNRPGVRVIKNPGGTNEAFVLESLKAA----EVSTHDKNAEIPALIAEGKGDVMITETYE 197

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                  + R     +   +  ++ L   + + D ++  ++ +    M    +L     
Sbjct: 198 ALYYAKADPRLYAAFVAAPLTPQNTLGFMLPKDDADYSRVMEFVWGLMDARGQLKQAAD 256


>gi|238025764|ref|YP_002909995.1| extracellular solute-binding protein family protein [Burkholderia
           glumae BGR1]
 gi|237874958|gb|ACR27291.1| Extracellular solute-binding protein family protein [Burkholderia
           glumae BGR1]
          Length = 263

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 70/216 (32%), Gaps = 11/216 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+      F    A+G  +GFD+D   A+           Q++  +      ALQ 
Sbjct: 29  TLRFGVEAQYAPFESKAADGTLQGFDIDLGNAVCR---LAQLSCQWVEASFDGLIPALQG 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           ++ D ++   + T  R  ++      I     Q         + + + L+G  + V  G+
Sbjct: 86  RKFDAINSAMNATAQRRQAIAFT-TIIYRVPTQLIARTASGLLPTAASLAGKRVGVLQGS 144

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E     ++    +    + ++   ++ A   A R DA      A     L+       
Sbjct: 145 IQEAYANAHWANAGVA--VLAYQDQSQVYADLVAGRLDATLVLAPAGQRGFLSRPDGKGF 202

Query: 215 VILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245
             +   +         +   + +GD      +    
Sbjct: 203 GFVGQPVRDDRMLGSGIGFGLREGDDALKARLDGAI 238


>gi|304385122|ref|ZP_07367468.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304329316|gb|EFL96536.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 495

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 79/264 (29%), Gaps = 29/264 (10%)

Query: 1   MYK-----DFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFA 48
           M K     ++   I  L ++            +T       I++RG++  G +     + 
Sbjct: 7   MRKEKTFFNWLFIIFSLCLISTGVDIADTVHATTKDPTYQRIRERGYIVLGTSPDYAPYE 66

Query: 49  EV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                       G D+   + ++  +      ++   ++     + LQ+ ++D++     
Sbjct: 67  FQTSSNGKSKDVGMDISVAKDIAHDLGVK---LKIKNMDFDSLLVGLQTGKVDMVLSGM- 122

Query: 106 WTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                     + F  + Y  GQ   I  K   +                 + +  LA   
Sbjct: 123 -NPSAARRKSVDFSNVYYQGGQSIIINQKDGHLFKDKNSFHQRKVAAQTGSIQYNLA--- 178

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT---NDRPSEHVILPDII 221
           K           E+  ++  A + ++ D    +     A           + H  L D  
Sbjct: 179 KKQIKGASVRGIEKGTDLILALQTNKVDGIVMEKPTAEAYAANNRGLKILNAHFKLNDDE 238

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
           + +  A A+ +G       ++ T 
Sbjct: 239 TST--AVALPKGSPVLKAKINQTI 260


>gi|153830813|ref|ZP_01983480.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|148873697|gb|EDL71832.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
          Length = 248

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDSIKGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  +    + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSH--DKDGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|282857093|ref|ZP_06266339.1| ABC-type polar amino acid transporter, periplasmic binding protein
           [Pyramidobacter piscolens W5455]
 gi|282585028|gb|EFB90350.1| ABC-type polar amino acid transporter, periplasmic binding protein
           [Pyramidobacter piscolens W5455]
          Length = 278

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 102/286 (35%), Gaps = 30/286 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K F   +  ++   F +    ++     ++R  ++         F   +    +W GF
Sbjct: 1   MKKKFVSVLSVMLFFVFGASLGASAAGNGAEER-VIRVATPGNYAPFTMYEELTQEWSGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +++  R +         +IQ++ ++    F  +   + D +++    T  R       F 
Sbjct: 60  EIELWRTIGEKTGY---RIQFIHIDTPAAFAEVDLGRADTVAKQISITPAR--RQKYEFT 114

Query: 120 PITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              +F      +      I S   + G ++ ++ G+     +A     + +K     +E 
Sbjct: 115 QPFFFSPYCLTVREDNNEIKSWKDMEGKTLALREGSAMNEFVAALDPDNKVKKAI--YES 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEW 237
                      R DAY                P  ++ILP  + K+P L    +  +   
Sbjct: 173 GNSALHETAMGRVDAY----------------PFAYLILPYRLKKNPELKLKSVDVENPI 216

Query: 238 YNIVSWTHYAMVTAEELGITQKN--INQVSKDTTNPDV-QRFLGID 280
           Y  ++   +A     ++ +   +  + ++  D +  ++ +++ G+D
Sbjct: 217 YTEINAYPFARTERGQMLLKLTDEILTRMIADGSYAELCKKWFGLD 262


>gi|182412549|ref|YP_001817615.1| histidine kinase [Opitutus terrae PB90-1]
 gi|177839763|gb|ACB74015.1| histidine kinase [Opitutus terrae PB90-1]
          Length = 570

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 82/264 (31%), Gaps = 24/264 (9%)

Query: 4   DFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
              ++   L+ +      S +  A+ +  I     ++ G++     F+ V A G+  G D
Sbjct: 15  TLLIAPSALLSMDQPALASLTFTAAEVEWIAAHPVVRVGLDPSWPPFSSVDARGNCVGID 74

Query: 61  VDFCRALSSAIFDDPSKIQYLPLN---AKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           VD  + L   +      I +        +E + A Q  + D+L+     T  RE      
Sbjct: 75  VDLLKRLGRQLG-----ITFECSTRGSWEEVYAAAQRGEFDVLAGTAS-TPEREK--DFI 126

Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    +      +    +  + SV  L G  +    G      +   +          + 
Sbjct: 127 FTEPYFRFPVVIVTRTDEPLLWSVLDLGGRKLVGVRGYAPTSEMQRRYP----DLVVDLV 182

Query: 177 ERVEEIDAAYRAHRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           + VE+          DA+  ++      A            +LP+      L  A+    
Sbjct: 183 DTVEQAMNRVADGEADAFVSNLPNVSFVAKTHGLTNLKIAGVLPESFD---LRYAVRLDA 239

Query: 235 TEWYNIVSWTHYAMVTAEELGITQ 258
               +++      +  AE   I  
Sbjct: 240 PILRSLLDRAIRRLSEAERQAIVH 263


>gi|261821753|ref|YP_003259859.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261605766|gb|ACX88252.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 327

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 18/250 (7%)

Query: 35  FLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +           A +   N    G + D  R ++ ++     ++  +P + ++  L + 
Sbjct: 80  TVAIATLGSSPPLAFLADDNKTVVGSEPDIARLVADSLG---LELNIVPTSWEDWPLGVA 136

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS---QLSGASICV 150
           S + D    N   T  R+      F      D  GF +     I S++    ++G  I V
Sbjct: 137 SGKYDAAIINITVTKERKE--KFDFA-TYRIDSLGFYVKSTSKIQSINEAKDIAGLKIIV 193

Query: 151 QAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +GT  E  L  + K +       + PI        + + ++ R DAY G        K 
Sbjct: 194 GSGTNQEAVLLAWDKQNRANGLTAFQPIYVTDDAAANLSLQSGRSDAYFGPNVVGA-YKA 252

Query: 207 TNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                 +HV   +    +   +A    +G +     ++     ++ + E         + 
Sbjct: 253 ELTGKVKHVGTVNGGYPNVAHIAVTTRKG-SGLVQPINTALNGVIKSGEYDRVLNRWGES 311

Query: 265 SKDTTNPDVQ 274
            +     ++ 
Sbjct: 312 IERIDRSEIN 321


>gi|62184897|ref|YP_219682.1| membrane transport protein, solute binding component [Chlamydophila
           abortus S26/3]
 gi|62147964|emb|CAH63712.1| membrane transport protein, solute binding component [Chlamydophila
           abortus S26/3]
          Length = 254

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 76/264 (28%), Gaps = 26/264 (9%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +      +      +L     S+       +K+      G N     F  +  +G+  
Sbjct: 1   MKQWISCLRILFFGCCLLLVGCNSS-------VKRDKIWLVGTNATYPPFEFIDKHGNTI 53

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   A+S  +  +   +++   +     L L+  +ID +      T  R+  + + 
Sbjct: 54  GFDIDLAEAISQRLGKELKVVEF---SFDALILNLKKHRIDAVLAGMSITPSRQKEIAML 110

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                       +  +      V  LS   S+ VQ GT  E  L               F
Sbjct: 111 PYHGEGIHELTIVSRQPISKDDVLPLSKYSSVAVQTGTFQEDYLLSL-----PGVCVRSF 165

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDT 235
           +   E+       +      + S  + +           + LP+          I +   
Sbjct: 166 DSTLEVLMEVGCKKSPIAVLEPSVAHVVLKEFPDVYTTTVDLPEDQWVLGCGLGIAKDRP 225

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
           E    V          EEL     
Sbjct: 226 EHVKEVQNVL------EELRADGT 243


>gi|16804387|ref|NP_465872.1| hypothetical protein lmo2349 [Listeria monocytogenes EGD-e]
 gi|47096047|ref|ZP_00233649.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224499028|ref|ZP_03667377.1| hypothetical protein LmonF1_04723 [Listeria monocytogenes Finland
           1988]
 gi|224503521|ref|ZP_03671828.1| hypothetical protein LmonFR_13612 [Listeria monocytogenes FSL
           R2-561]
 gi|254826826|ref|ZP_05231513.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254831226|ref|ZP_05235881.1| hypothetical protein Lmon1_07707 [Listeria monocytogenes 10403S]
 gi|254901125|ref|ZP_05261049.1| hypothetical protein LmonJ_14963 [Listeria monocytogenes J0161]
 gi|254914025|ref|ZP_05264037.1| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|254938340|ref|ZP_05270037.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|255026977|ref|ZP_05298963.1| hypothetical protein LmonocytFSL_12738 [Listeria monocytogenes FSL
           J2-003]
 gi|16411837|emb|CAD00427.1| lmo2349 [Listeria monocytogenes EGD-e]
 gi|47015644|gb|EAL06575.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258599204|gb|EEW12529.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610952|gb|EEW23560.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|293592043|gb|EFG00378.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 269

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 74/216 (34%), Gaps = 5/216 (2%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G  T       +  NG   G+DV+  + +   +       ++  ++     ++L +
Sbjct: 36  TITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKF--KFKTMDFSNLLVSLGA 93

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            ++DI++   + +  RE            F  Q  ++     I+S   L+G  +   A +
Sbjct: 94  GKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATS 153

Query: 155 TTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
              L L    +     +      +   +     +  R DA     +             +
Sbjct: 154 NGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATIS--TPFAVDFQNKTSAIK 211

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             ++ D++S + +   + + +T+    V     +++
Sbjct: 212 EKVVGDVLSNAKVYFMLGKDETKLSKKVDEALQSII 247


>gi|224368517|ref|YP_002602680.1| GlnH1 [Desulfobacterium autotrophicum HRM2]
 gi|223691233|gb|ACN14516.1| GlnH1 [Desulfobacterium autotrophicum HRM2]
          Length = 273

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 13/205 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++   +  + L  +FF S   +A  +         K GI+     +      G+ KGFD 
Sbjct: 4   FRKQILGAVFLFAVFFLSSLASADEVP------VYKLGIDAAFPPWTWA-EKGEIKGFDW 56

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  + +      +  K++   +       AL   +IDIL+    +T  R  +  + F   
Sbjct: 57  ELFQYIGE---VEGFKVEAADIPWSAIIAALSKGKIDILAGGLSYTCKR--AQVIDFALP 111

Query: 122 TYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +      ++     ++ ++ +  GA++  QAGTT    L +  K   +  +   +E VE
Sbjct: 112 HWKTDYWTLVKSDSKLNCITAMSKGANVGAQAGTTGYRWLKEELKDKGVDINIKPYESVE 171

Query: 181 EIDAAYRAHRCDAYTGDISALYALK 205
                    R DA+  D        
Sbjct: 172 LGIKELEIGRIDAFHVDSPTARGFI 196


>gi|118472383|ref|YP_885990.1| extracellular solute-binding protein, family protein 3
           [Mycobacterium smegmatis str. MC2 155]
 gi|118173670|gb|ABK74566.1| extracellular solute-binding protein, family protein 3
           [Mycobacterium smegmatis str. MC2 155]
          Length = 285

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 24/258 (9%)

Query: 8   SILCLIILFFTSFSTNASILG----------DIKKRGFLK-CGINTGLVGFAEVKANGDW 56
           + + L  +     S+  +              +     LK C  N G         +GD 
Sbjct: 13  AAVSLAGMVAGCSSSEGATPEPTGPAKVSPPAVLTADTLKICAPNDGTPPSVYHDESGDL 72

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G +VD  +AL++ +   P    ++          LQ+KQ D++         RE    +
Sbjct: 73  VGSEVDLGKALAANLGLKPE---FVQSAFAAVIPTLQAKQCDVIMAQLYIKPEREKV--V 127

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTE---LTLADYFKAHNMKY 171
            F P  Y      +        +     L G  + V  GTT E      +D   A     
Sbjct: 128 DFVPYVYSGTGIAVSKAHPAAITGMDDSLCGKKVMVAVGTTAEVLSQEQSDKCTAAGKPP 187

Query: 172 HPIVFERVEEI-DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
             I      ++     +  + DAY      +          ++  +  +      +  A 
Sbjct: 188 VDINRNNHADVSIQQVQNGQVDAYLDTAETI--GYYETKTGAQIQMAGEPFGTIKIGAAT 245

Query: 231 IQGDTEWYNIVSWTHYAM 248
           ++G+T  ++ +     A+
Sbjct: 246 LKGNTALHDAIQQALQAI 263


>gi|326795940|ref|YP_004313760.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326546704|gb|ADZ91924.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 264

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 20/253 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +S+   +     + +  A  L +    G L  G+      F     + +  GFD +    
Sbjct: 9   ISVFSALSAGVLAQTAVAGTLTE----GKLIIGMEITYPPFESYDGD-EVVGFDPELTAL 63

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L++ +  +     +         L L + + D +         R               G
Sbjct: 64  LAAKMGVEE---SFSDNKFTGLILGLGANKFDAVISGMYIKDERLKQAD---AVPYARTG 117

Query: 127 QGFIMHKKKGISSVSQ--LSGASICVQAGTTTE---LTLAD-YFKAHNMKYHPI-VFERV 179
              ++ K   I   +   L G  + +Q GT+       L+D Y   + +K   +  F   
Sbjct: 118 ASIMVPKNSKIMPKTDKELCGVKVGLQQGTSWVKAFKNLSDSYCVPNGLKPVVVQEFPSA 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A  +   +A   +I+    + +   +    V   D+I  + L   + +G+ E  +
Sbjct: 178 PEATQAMLSGNVEAQV-EIAGAAKMFIQRTKGRIQVSSTDLIYPNTLGIYVKKGNAELKS 236

Query: 240 IVSWTHYAMVTAE 252
                  A + A+
Sbjct: 237 AFEKAM-AEIKAD 248


>gi|296126599|ref|YP_003633851.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
 gi|296018415|gb|ADG71652.1| extracellular solute-binding protein family 3 [Brachyspira
           murdochii DSM 12563]
          Length = 260

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 19/255 (7%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K     +  L IL   ++   N++      I     +K GI         + +N +  
Sbjct: 7   MNKVIIFVLSALFILISLSACRNNSNKAEDKKIYNNTSVKVGIYVYDYPLLYL-SNDNLG 65

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD D    ++ A   +  K++Y+     E   +LQ+  IDI       T  R+    ++
Sbjct: 66  GFDYDIMNEIAKA---ENLKLEYIQTPFSELIPSLQNDMIDIAIAGISITEERKKL--VS 120

Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y   Q  I+ K    I     L G  + V   T     ++D   + +   + + F
Sbjct: 121 FSDKYYSSSQSIIVLKDNNDIKVFDDLIGKRVGVIKDT-----ISDTIISASNNINVVRF 175

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDT 235
           +       + +    +A   D        +  D   +  I  DII      A A+ + ++
Sbjct: 176 DIAGSALLSLKIENVEAVMLDRVTCN-NYIRYDN--DIKIAEDIIFPELDYAIALKKNNS 232

Query: 236 EWYNIVSWTHYAMVT 250
                ++     +++
Sbjct: 233 ILLKKINSGLNTIMS 247


>gi|153212964|ref|ZP_01948558.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
 gi|124116190|gb|EAY35010.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
          Length = 248

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 81/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDSIKGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  + K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSHDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|309800523|ref|ZP_07694675.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
 gi|308115871|gb|EFO53395.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
          Length = 333

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 54/176 (30%), Gaps = 7/176 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K   +T    F     +  +KG DVD    ++     +   IQ           A+Q+
Sbjct: 25  TIKIVSDTAYAPFEFKDTDQTYKGIDVDIINKVAEIKGWN---IQMSYPGFDAAVNAVQA 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D +      T  RE           Y         K   I+   +LSG ++ V+ GT
Sbjct: 82  GQADAIMAGMTKTKERE--NVFTMSDTYYDTKVVIATTKSNKITKYEELSGKTVGVKNGT 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             +  L      +        F+  + ++ +      +A   D   +         
Sbjct: 140 AAQRFLESIKDKYGF--TIKTFDTGDLMNNSLSTGAVNAIMDDKPVIEYAINQGQD 193



 Score = 43.5 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +   TS ++       +K         ++    F    ++  + G D+D  +A++ 
Sbjct: 253 VTSLTSTTSAGQKATPVKS--KYVIASDSSFAPFVFQNSSNQYTGIDMDLIKAIAE 306


>gi|167567095|ref|ZP_02360011.1| hypothetical protein BoklE_31336 [Burkholderia oklahomensis EO147]
          Length = 315

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + LS ++      ++ + L   +  LAL+
Sbjct: 67  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLSDSLGRK---LKIVALAWADWPLALE 123

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 124 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIKEPKDVAGLRVIT 180

Query: 151 QAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +    +K   + +     + + A ++ R DA     S L     
Sbjct: 181 DAGTNQEKILLEWDRENVARGLKAVTVQYYDDHAVKSVALQSGRADAIFSVNSVLAYQAA 240

Query: 207 TN 208
             
Sbjct: 241 QQ 242


>gi|261409442|ref|YP_003245683.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Paenibacillus sp. Y412MC10]
 gi|261285905|gb|ACX67876.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Paenibacillus sp. Y412MC10]
          Length = 351

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 10/244 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +     S L    ++G++  G       +A  +ANG+  G  V+  R +   +     +
Sbjct: 85  AACGDKGSTLDRAIEQGYITVG-FANEKPYAYKEANGELTGEAVEIARVILERLGIKEMR 143

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
            +            LQ+ + D+++        R  ++  A    +  +           +
Sbjct: 144 GEL--TEFGSLVAGLQADRFDLITAGMFINPDRCSAVLFANPEYSIGEALAVKQGNPMEL 201

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S   ++       A  T  + +    K+       +         +A +A R  A T  
Sbjct: 202 GSYEDIAKNEQAKVAVMTGAVEIGYMEKSGIPADRIVQVPDQASAISALQADRVQAITMT 261

Query: 198 ISALYALKLTNDRPS-------EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +L A+  +    S       E  ++     +   A A  Q DTE+    +     M  
Sbjct: 262 GPSLQAMLDSASDDSIERVADFEQPVIDGESVRGYGATAFRQADTEFQEAYNAELEKMKE 321

Query: 251 AEEL 254
           + EL
Sbjct: 322 SGEL 325


>gi|260654207|ref|ZP_05859697.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Jonquetella anthropi E3_33 E1]
 gi|260630840|gb|EEX49034.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Jonquetella anthropi E3_33 E1]
          Length = 521

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 74/260 (28%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGD--WK 57
           M + F +       L   +    A+     +    L+ G +  G V +            
Sbjct: 1   MRRLFRLLAGAFGALTLCAAGAWAA-----EDLPELRWGGDSEGNVPYMFGDPENQERMI 55

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+VD   AL   +   P    ++          L  K  D+     + T   E    + 
Sbjct: 56  GFEVDLVEALCRQMGRRP---VFVSNGWDNLIPGLNLKLYDMALSGLEITA--EHRQAVD 110

Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      ++ +     I+ +    G ++     +    TL D             
Sbjct: 111 FSLPYYKTFLQLVVPRGNPKKIADLGSCVGQTVGTLKQSYAYDTLVDA-----GVTDIRT 165

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +E            R DA   D          N        + + I       A+ QGD+
Sbjct: 166 YENEINAYQDMANGRLDAVLMDSPIAIFYAGFNPN---LEFVGEPIGSMEYGIAVRQGDS 222

Query: 236 EWYNIVSWTHYAMVTAEELG 255
              N ++    A+  + +L 
Sbjct: 223 ALKNELNAALTALRESGQLR 242


>gi|239820263|ref|YP_002947448.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239805116|gb|ACS22182.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 277

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 88/272 (32%), Gaps = 19/272 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57
            +    ++L L      + S      S +  +++   L+ G   G + +      +G W+
Sbjct: 4   KRAILRTLLALTSACTLTLSVAQEPESSMTRVQRTKVLRVGAIAGAIPYFSKDLVSGKWE 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  DF  +L+       +K++Y+        L LQS +ID        T  R+    + 
Sbjct: 64  GFGPDFSESLAKKFG---AKVEYVETTWGNAVLDLQSNKIDA-MFGMAPTPARKEV--VN 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    + +    +  K     +  QL      I V  G++ +                  
Sbjct: 118 FSDTLFDNTYTAVCKKGFPTKTWEQLNAPENKIVVDVGSSHDQLATRILPKA----DVQR 173

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            E       A +A R D     I     L          + +P  I  +P++  + +   
Sbjct: 174 LENSGSATLALQAGRADCQILVILLAQPLLAKRAN-VGVMQIPTPIYTAPVSIGLRKEAD 232

Query: 236 EWYNIVSWTHYAMVTA--EELGITQKNINQVS 265
                        V A  E   +  KN+ +++
Sbjct: 233 PAMQTAVNAWLGEVRAKGEVRSVILKNMEKLA 264


>gi|116618336|ref|YP_818707.1| ABC-type amino acid transport system, periplasmic component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116097183|gb|ABJ62334.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 278

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 67/228 (29%), Gaps = 16/228 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    +          F  +  NG   GFD+D  ++LS                    F 
Sbjct: 42  KSEKKISVLTYANWNPFEYI-KNGKVVGFDLDILKSLSKEAGYQY---TIKNTGWDSMFT 97

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            L S   D        T  R+ +   +F    +   Q  I+ K    I + + L    + 
Sbjct: 98  QLNSGSADAAISGITITKDRQKT--YSFSKPYFVSRQAIIVKKTDTVIKNATDLKNKKVA 155

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           VQ G+T E         ++     I  ++           + DA  GD +     K    
Sbjct: 156 VQLGSTGEEAAESILGKNSSN---ISKDKGGTTFLQVVHGQADAAIGDETT--VKKYVAS 210

Query: 210 RPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            PS  + +                 + ++++ +  +     ++   E 
Sbjct: 211 NPSYKLKVIYDDKNFEPEYFGLMFTK-NSKYRSTYNAALKKIIDNGEY 257


>gi|20089380|ref|NP_615455.1| solute-binding family 3 protein [Methanosarcina acetivorans C2A]
 gi|19914275|gb|AAM03935.1| bacterial extracellular solute-binding family 3 protein
           [Methanosarcina acetivorans C2A]
          Length = 738

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 74/224 (33%), Gaps = 22/224 (9%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               +  IK RG L+ G N+  + F     NG   G+DV     L+     + SKI+++P
Sbjct: 481 EGDTVKLIKNRGTLRVGYNSNCIPFVYFNKNGSLVGYDVQMAYDLAQ--LLNVSKIEFVP 538

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--------KK 134
           +        L S   DI+  +   T  R     + F          F++         K 
Sbjct: 539 VTGDSLPDDLNSGVCDIVMSSVTVTPER--LDEIKFTESYMTVHMAFVVRDERKKEFLKL 596

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           + +  +  L    I V   T      ++ F             +++ I   +   + D  
Sbjct: 597 EEVRKIDDL---RIAVLNNTAFAGVASELFPGAK-------IVKIDSIWDFFDGDQADVL 646

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                  Y + L +      +  P    +   A  + + ++E +
Sbjct: 647 FTTAEEGYTMTLVHPFYDVAIFEPHGSYEVLYAYPVAKNNSETF 690


>gi|254781112|ref|YP_003065525.1| putative amino acid-binding periplasmic ABC transporter protein
           [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040789|gb|ACT57585.1| putative amino acid-binding periplasmic ABC transporter protein
           [Candidatus Liberibacter asiaticus str. psy62]
          Length = 274

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 36  LKCGINTGLVGFAE--VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           L+ G +      +       G+  GFD+D  + ++  +     K+++           L 
Sbjct: 43  LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL---NLKVEFFETAVSGLITGLD 99

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152
           + + D+L  N   T  R+      F           ++   ++ I S   L+  ++    
Sbjct: 100 TNRYDVLV-NVAITPERQK--KYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQIL 156

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     L+ + K      H +     E+      + R DA        +          
Sbjct: 157 GT----DLSRFAKELK--SHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDG 210

Query: 213 EHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAM 248
               + D +  +  +A  + +G+ +    ++    A+
Sbjct: 211 NLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAI 247


>gi|88858577|ref|ZP_01133219.1| putative transport binding protein [Pseudoalteromonas tunicata D2]
 gi|88820194|gb|EAR30007.1| putative transport binding protein [Pseudoalteromonas tunicata D2]
          Length = 464

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 11/239 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F+ I C ++L  T    N + L  I ++  L+ GI  G   +  +  +G+  GF+
Sbjct: 1   MMRIIFLLISCCVLLACT-EQENTTQLQKIVQQEKLRVGILVGQSTY-YLDNDGE-AGFE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +   A +  +      + +   +  + F  L++  ID+++        R       F P
Sbjct: 58  FELASAFADFLGVKLEVVPFF--SRADIFPRLKNGNIDLIASGLSINKERIKHYR--FAP 113

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 Q  +  +      + SQLSG+ + +   +  E       +   + +        
Sbjct: 114 QYRSISQKLVFKQGNERPRNFSQLSGSLMVLSQSSHAESLKQAKLRFEELTWQETDDMDE 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E+         D    D + L   +  +    E  I   +  + P+A  + + D +  
Sbjct: 174 AELLQLILDGSLDYTIADSNNLALFRRYHP---ELSIGFSVTKEEPVAWMLAESDDDSL 229


>gi|302344237|ref|YP_003808766.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
 gi|301640850|gb|ADK86172.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
          Length = 286

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 28/262 (10%)

Query: 1   MYKDFF-----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +        +++   + +       N S    ++  G ++ G       +A + A+G 
Sbjct: 1   MKRIALFGGIGLAMAAALAVGVVGVMPNDSSWELVRDSGVIRIGYAVE-APYAFLAADGQ 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G   +  + +++ +     ++++  +        L++ +ID+++     T  R     
Sbjct: 60  VTGESPEVAKYVAAKLGLC--RVKWRQVEFASLIDELEAGRIDVVAAGMFVTPQRAR--R 115

Query: 116 LAFRPITYFDGQGFIMHKKKG-----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           ++F   T+    G +  +              L+   I   AG+  E  L     A   +
Sbjct: 116 VSFSLPTFQVRPGLLTPRGNPRGLHSYRQALALADIRIATLAGSVEEQALRRMGAA---Q 172

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISAL-------YALKLTNDRPSEHVILPDIISK 223
              +         AA  +   DA      A+          +     P       +    
Sbjct: 173 AQLVTVPDALTGRAAVESGAADALALSSPAVRWLAMTGPTGRTEAAEPFHAPRDGETGLG 232

Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245
              A A  + D       +   
Sbjct: 233 ---AFAFRKADRRLLEAWNAVL 251


>gi|27364435|ref|NP_759963.1| amino acid ABC transporter periplasmic amino acid-binding portion
           [Vibrio vulnificus CMCP6]
 gi|320157818|ref|YP_004190197.1| amino acid ABC transporterperiplasmic amino acid-binding portion
           [Vibrio vulnificus MO6-24/O]
 gi|27360554|gb|AAO09490.1| Amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio vulnificus CMCP6]
 gi|319933130|gb|ADV87994.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio vulnificus MO6-24/O]
          Length = 250

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 20/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      SI  + +   T  +              +K G++     F  VK +   +GF+
Sbjct: 1   MNNWIKASIAAIALSVATFQAVAEE---------VVKVGMSGRYFPFTFVKQD-QLQGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +          ++Y+  N    F  L++ +ID +S     T  R+      F  
Sbjct: 51  VDMWDEIGKRNGYK---VEYVTANFSGLFGLLETGRIDTISNQITMTDARKA--KYLFAD 105

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               DG    + K    I  V+ L+G ++ V  G+  E  L DY K  + K +   ++  
Sbjct: 106 PYVVDGAQITVRKGNDSIKGVADLAGKTVAVNLGSNFEQLLRDYDK--DGKINIKTYDTG 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        R DA+  D  +   L      P +    P     +       +   +   
Sbjct: 164 IE--HDVALGRADAFVMDRLSALELIKKTGLPLQLAGEPFETIANAWPFVNNERGVKLQG 221

Query: 240 IVSWTH 245
            V+   
Sbjct: 222 EVNKAL 227


>gi|153011665|ref|YP_001372879.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563553|gb|ABS17050.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 314

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 20/194 (10%)

Query: 24  ASILGDIK-----KRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           A  + +IK     K G L  GI+T   L        +    G+DVD  + ++ ++     
Sbjct: 47  AKRVEEIKDFKFVKDGVLTIGISTSGHLPLHDYASDSKTVIGYDVDLAQIIADSLG---L 103

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135
           +++ + +   +  L L S + D +  N   T  R+      F      D  GF +     
Sbjct: 104 QLELVSVAWADWPLGLSSGKFDAVISNVTVTEERKE--KFDFS-TYRKDELGFYVKSDSE 160

Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRAH 189
              I S   ++G  +   AGT  E  L ++ + +    +K   + +   + +   A ++ 
Sbjct: 161 IGEIKSPKDIAGLKVITDAGTNQEKILLEWDRQNVAAGLKAVEVQYYDDDAVKDLAVQSG 220

Query: 190 RCDAYTGDISALYA 203
           R DA     +    
Sbjct: 221 RADAVFSVNATQAY 234


>gi|205352136|ref|YP_002225937.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|213022065|ref|ZP_03336512.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
 gi|205271917|emb|CAR36760.1| arginine-binding periplasmic protein 2 precursor [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
          Length = 200

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 12/193 (6%)

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD+D   AL   +    ++  +          AL+ ++ D +    D T  R   +   
Sbjct: 2   GFDIDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA-- 56

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F     +     ++ KK    + + L G  I ++ GTT +  L D           + ++
Sbjct: 57  FSNPY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYD 111

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDT 235
             +      +  R D   GD + +     TN +  P+   +       + L  A+   + 
Sbjct: 112 SYQNAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNK 171

Query: 236 EWYNIVSWTHYAM 248
                ++    A+
Sbjct: 172 ALLEKLNNALAAI 184


>gi|251788055|ref|YP_003002776.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247536676|gb|ACT05297.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 315

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 18/233 (7%)

Query: 34  GFLKCGIN--TGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L   +         A +   N    G + D  R ++ ++     ++  +  + ++  L
Sbjct: 62  GKLTVAVAALGSSPPLAFLADDNKSLIGSEPDIARLVADSLG---LELNLVATSWEDWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
            + S + D+   N   T  R+      F      D  GF +    K + I S   ++G  
Sbjct: 119 GVASGKYDVAITNVTVTKARKE--RFDFA-TYRADTLGFYVKSSSKIQTIQSAKDIAGLK 175

Query: 148 ICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L D+ K +       + P+        + + ++ R DA  G       
Sbjct: 176 IIVGSGTNQEAILLDWDKQNQAAGLPLFQPVYVTDAAAANLSIQSGRADATFGPNVTGAY 235

Query: 204 LKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + +      +       + +A    +G+      ++     ++   E  
Sbjct: 236 AAALHGQTRLVGTVNGGWPQVAHIAVTTRKGNG-LVTALNTALNGVIQGGEYD 287


>gi|218670915|ref|ZP_03520586.1| putative substrate-binding component of ABC transporter [Rhizobium
           etli GR56]
          Length = 101

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   F   ++ L+     S       S L ++  RG L  G  +    +    A+   +G
Sbjct: 1   MTISFRTGVISLVAAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           FDVD  R ++ A+F DP KI+Y+  ++  R   + + ++DI
Sbjct: 61  FDVDMGRIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDI 101


>gi|167574649|ref|ZP_02367523.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia oklahomensis C6786]
          Length = 315

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI       +          GFD D  + LS ++      ++ + L   +  LAL+
Sbjct: 67  TLTVGIAPSQPPISAYATDARTVVGFDADLAQLLSDSLGRK---LKIVALAWADWPLALE 123

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I+S      ++G  +  
Sbjct: 124 SGRVDAVLSNVTVTEERKA--KFDFS-TYRKDQVGFYVKSDSKIASIKEPKDVAGLRVIT 180

Query: 151 QAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYALKL 206
            AGT  E  L ++ + +    +K   + +     + + A ++ R DA     S L     
Sbjct: 181 DAGTNQEKILLEWDRENVARGLKAVTVQYYDDHAVKSVALQSGRADAIFSVNSVLAYQAA 240

Query: 207 TN 208
             
Sbjct: 241 QQ 242


>gi|78062384|ref|YP_372292.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77970269|gb|ABB11648.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 315

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  G+   L    +         GFD D  + +S +       ++ + L   +  LAL
Sbjct: 66  GTLTIGVAPSLPPISSYATDARTVIGFDADVGQLVSDSFGRK---LKIVALAWADWPLAL 122

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASIC 149
           +S ++D +  N   T  R+      F      D  GF +    K + I     ++G  + 
Sbjct: 123 ESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQAIREPKDVAGLRVV 179

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT  E  L  + + +            ++       A ++ R D      S L    
Sbjct: 180 TDAGTNQEKILLAWDRENVAHGLKPVQIQYYDDQAMRIVAVQSGRADVVFSVNSVLAYQS 239

Query: 206 LTNDR 210
               +
Sbjct: 240 AQQGK 244


>gi|121591473|ref|ZP_01678746.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|229520183|ref|ZP_04409610.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae TM 11079-80]
 gi|121546675|gb|EAX56857.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|229342777|gb|EEO07768.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae TM 11079-80]
          Length = 248

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNEAIKGIDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L ++ K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRNHDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|237786313|ref|YP_002907018.1| hypothetical protein ckrop_1754 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237759225|gb|ACR18475.1| putative secreted protein [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 243

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 9/183 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             IK RG L  G +        V ++G   +GF++D  RAL+  +  D            
Sbjct: 66  EPIKSRGALIVGTSADYAPAEFVGSDGKTLEGFEIDLTRALARVMGLDAD---IRNSTFD 122

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ + + D           R     +    +        +            L G 
Sbjct: 123 SIIPSVGT-KFDAGISAFTINKER--MKQVNMVSLYDSGRAFGVAKGNPKNVDPEHLCGH 179

Query: 147 SICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           S+ VQ G+  E  + +         K     ++   +   A    + D    D   +   
Sbjct: 180 SVAVQTGSLHEEVVTEEASHCGSGEKLTIQSYKNQTDASTAVVGRKADVMVADSPIVSYA 239

Query: 205 KLT 207
              
Sbjct: 240 VNQ 242


>gi|126725000|ref|ZP_01740843.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126706164|gb|EBA05254.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 243

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 65/217 (29%), Gaps = 16/217 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G       +  V   G+  GF+ +   AL         +  ++  +       L S 
Sbjct: 25  IRMGTEGAYPPYNFVNDAGEVDGFEREVGDALCERA---ELECTWVTNDWDSIIPNLVSG 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
             D +      T  R+    + F    +       +           LSGA +  Q  T 
Sbjct: 82  NYDTIIAGMSITDERDEV--IDFTSEYFPPDPSTYVA---LAGYDGDLSGAVVAAQTSTI 136

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +A      +     + F   EE  AA R    DA   D  A  A  +         
Sbjct: 137 QASYIA------SSGATLVEFATPEETVAAVRNGEADAVLADD-AFLADIVNASNGELAF 189

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
               +     +   I + DTE  + ++    A + A+
Sbjct: 190 TGEPVSIGGGIGMGIRESDTELKDKMNAAI-ASIKAD 225


>gi|119386413|ref|YP_917468.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119377008|gb|ABL71772.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 240

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 63/212 (29%), Gaps = 19/212 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         +  +   G   GF+VD    L         +  ++  +       L S
Sbjct: 22  TVRIATEGAYPPYNLINDQGQVAGFEVDLGNELCKRA---ELQCTWVKNDWDSIIPNLVS 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +         R+  +   F                  +   + L    + VQ GT
Sbjct: 79  SNYDAIMAAMSINEERKQVIA--FSEDYLPPAPS----SYVALDEGANLETGIVAVQTGT 132

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +AD       +   + +  ++++ AA R    DA  GD   +   +   +   + 
Sbjct: 133 VQASHVAD------TQATMLEYPNIDQVFAAVRNGEADAAFGDHEVM---RPFVEDSEDL 183

Query: 215 VILPD-IISKSPLAPAIIQGDTEWYNIVSWTH 245
           + + + +     +   + Q D E    ++   
Sbjct: 184 IFVGEQVRLDEGIGIGVRQSDNELREKLNAAI 215


>gi|315655159|ref|ZP_07908060.1| serine/threonine-protein kinase PknD [Mobiluncus curtisii ATCC
           51333]
 gi|315490414|gb|EFU80038.1| serine/threonine-protein kinase PknD [Mobiluncus curtisii ATCC
           51333]
          Length = 298

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 76/278 (27%), Gaps = 30/278 (10%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNASILGDIK------------KRGFLKCGIN 41
           M K             L       +S   N+     IK             R  L+  ++
Sbjct: 5   MKKISAAAGAVLLAGTLASCAGSTSSAGVNSYNFDSIKPDPEIVAMVPQANRETLRVVMD 64

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                   + +N    G++VD  +ALS  +     KI     +       +     D+  
Sbjct: 65  IPYSPAEFLDSNKQPVGYEVDVMKALSKLMGVSDLKIS--DEDFDAIIPKINDGTYDVGV 122

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
            +   T  R     +                        +   G  +  Q+GTT   TL 
Sbjct: 123 SSMTATKAR--MSQVNMVTYIQSGYIYGTQAGNPKNFDPANSCGLKVAAQSGTTQAETLQ 180

Query: 162 D----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
                  KA       +  E  E++     A   DA  G+   +   +  N +      +
Sbjct: 181 ANSDSCVKAGKPAIQVVTDEDQEKLIEQVAAGTLDAIIGESPIMAYAESRNPK---FATV 237

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +    +P  PA  + + E    +      M+    L 
Sbjct: 238 GEAFQVAPQGPATAKDNPELAKAIQAGLQKMMDTGMLK 275


>gi|213027614|ref|ZP_03342061.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 149

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 13/134 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFIMHKK 134
             Y      I  K+
Sbjct: 108 KLYAADSRLIADKR 121


>gi|238022972|ref|ZP_04603398.1| hypothetical protein GCWU000324_02894 [Kingella oralis ATCC 51147]
 gi|237865780|gb|EEP66918.1| hypothetical protein GCWU000324_02894 [Kingella oralis ATCC 51147]
          Length = 282

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 70/255 (27%), Gaps = 26/255 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLK-CGINTGLV------------GF 47
           M     + ++ ++ L         S +  + +        +N                 F
Sbjct: 1   MKMTRLIPLVAVLALLGCG----KSEVQKVAEPKVASDVAVNDTRPVYNVYFDINGIAPF 56

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               A+    GF +D   A+       P    ++P +       L     D+       T
Sbjct: 57  VMADADNRPSGFGIDLVTAIGDKQGFRP---NFIPHDFTGMLEGLGKG-ADLAVSAISIT 112

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R     + F    +   Q  ++ +   I+S + L G  + V   +  E  +      +
Sbjct: 113 DERRAL--VDFTNSHFETTQAILVPEGSPITSTNDLKGKKVAVVEDSVGEDMVLQIQAGN 170

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 +    V            DA   D + L             VI+     KS  A
Sbjct: 171 G---SIVHNTSVWSAVQQVMRKEVDAAFSDYAPLTYYANNYKDQKLRVIVDPTSPKSYYA 227

Query: 228 PAIIQGDTEWYNIVS 242
            A+ +   E    ++
Sbjct: 228 LAVAKNKPELLKQLN 242


>gi|229817430|ref|ZP_04447712.1| hypothetical protein BIFANG_02692 [Bifidobacterium angulatum DSM
           20098]
 gi|229785219|gb|EEP21333.1| hypothetical protein BIFANG_02692 [Bifidobacterium angulatum DSM
           20098]
          Length = 317

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 13/227 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             + K G    G++        + A+G    GFDVD  +A++               N  
Sbjct: 68  ESVTKDGKFTVGMDLSYPPAEFLAADGKTPVGFDVDLVKAMAKEFGLTADP---QNANFD 124

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               ++ + + DI   +   T  R     + F  I        +         VS + G 
Sbjct: 125 SIIPSVGA-KYDIGISSFTITPER--LKAVDFVTIFKSGSAWVVRKGNPNKVDVSDVCGL 181

Query: 147 SICVQAGTTTELT---LADYFKAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + VQ  T  E     L +  KA   K    +  +   ++       + D  +   SA+ 
Sbjct: 182 KVTVQTATIQEEEVNKLNEQCKADGKKAIDVLSNKLQTDVTTNVTTGKAD-VSYADSAVA 240

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              +      +   L      +  A A+ +GDT     V      ++
Sbjct: 241 GYAIAQTDG-QLETLGKATGMAKEAVAVKKGDTATAQAVQKALQKLI 286


>gi|204927958|ref|ZP_03219159.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204323300|gb|EDZ08496.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
          Length = 253

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 17/238 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K   +S++ L I+  ++F+        I +   L   ++          A+G  +G D+
Sbjct: 3   FKKIGLSMIVLGIMSSSAFA------DSIVEGKTLNVAVSPASPPMLFKSADGKLQGIDL 56

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   +   +     +  +Y          A+ S Q D+       T  R+    + F   
Sbjct: 57  ELFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEP 111

Query: 122 TYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFE 177
            Y +    +      I  +++++L+  SI    G      + +  +           ++ 
Sbjct: 112 YYINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYP 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 172 TYNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|55823558|ref|YP_141999.1| ABC transporter substrate-binding protein, amino acid
           [Streptococcus thermophilus CNRZ1066]
 gi|55739543|gb|AAV63184.1| ABC transporter substrate-binding protein, amino acid
           [Streptococcus thermophilus CNRZ1066]
          Length = 283

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 18/254 (7%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V  IL L +L   +          +  ++  +    ++    F   K + D+KG
Sbjct: 9   MKKWLAVMGILGLSVLTLAACGNKGDS--KVSGEKQTITVATDSDTAPFTFKKGD-DFKG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  +A+      D  +++++          + S +  I + + ++   R  +   +F
Sbjct: 66  YDMDLVKAVFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEER--AQKYSF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      I  +    +S+  LSG +  V  GT     L ++    +     I +  
Sbjct: 122 SDPISRSNYAIISAEGTKYTSLDDLSGKTTEVLPGTNYAQLLENWNANADKTPITINYAS 181

Query: 179 VEEIDAAYRAHR---------CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                +    H           DA + +               +  I         L  +
Sbjct: 182 SSTGLSTRVQHIQEGKIDFILYDAISSEYIIKDQGYKLAVNKIKDDIGMKTDGLEYLLFS 241

Query: 230 IIQGDTEWYNIVSW 243
             +   E    V+ 
Sbjct: 242 KNKQGKELKTFVNK 255


>gi|301793433|emb|CBW35806.1| ABC transporter, substrate binding protein [Streptococcus
           pneumoniae INV104]
          Length = 276

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 71/228 (31%), Gaps = 10/228 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S  A   G    +  +    N     F   + NG+  G++++  RA+      D   ++
Sbjct: 24  CSGGAKKEGQAASKKEIIVATNGSPKPFIY-EENGELTGYEIEVVRAIFKD--SDKYNVK 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGIS 138
           +        F  L + + ++   N  +T  R       +      +    ++ K    I 
Sbjct: 81  FEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KYLYAAPIAQNPNVLVVKKDDSSIK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--RVEEIDAAYRAHRCDAYTG 196
           S+  + G S  V   TT+   L  Y   H      + +     ++I       + D    
Sbjct: 139 SLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILNYTKADFQQIMVRLSDGQFDYKIF 198

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSW 243
           D        + N       ++     + P     + QG  E  + V  
Sbjct: 199 DK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQGQDELKSFVDK 245


>gi|253688536|ref|YP_003017726.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755114|gb|ACT13190.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 326

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 34  GFLKCGIN--TGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G     I         A +   N    G + D  R ++ ++     ++  +P + ++  L
Sbjct: 76  GKFTVAIAALGSSPPLAFLADDNKTVVGSEPDIARLVADSLG---LELNIVPTSWEDWPL 132

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
            + S + D    N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 133 GVSSGKYDAAIINITVTKERKE--KFDFA-TYRVDSLGFYVKSTSKIQSIKEAKDIAGLK 189

Query: 148 ICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L  + K +       + PI        + + ++ R DAY G       
Sbjct: 190 IIVGSGTNQEAVLLAWDKQNRANGLPAFQPIYVTDDAAANLSLQSGRSDAYFGPNVIGA- 248

Query: 204 LKLTNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            K       +HV   +    +   +A    +G +     ++     ++ + E        
Sbjct: 249 YKAELTGKVKHVGTVNGGYPNVAHIAVTTRKG-SGLVQPINTALNGVIKSGEYDQVLNRW 307

Query: 262 NQVSKDTTNPDVQ 274
            +  +     ++ 
Sbjct: 308 GESIERIDRSEIN 320


>gi|221196253|ref|ZP_03569300.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
 gi|221202926|ref|ZP_03575945.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221176860|gb|EEE09288.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221182807|gb|EEE15207.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
          Length = 280

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 95/284 (33%), Gaps = 20/284 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F      L+ L F +  T+A+ L  +K  G L  G +     +A +   G   GFD +
Sbjct: 8   RRFLRG--ALVPLAFAASLTSAAPLQTVK-PGTLLIGSDLTYPPYAYLDG-GKPAGFDAE 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F R L++ +  +P    +L     +  L +++++ D+++     T   +    + F P  
Sbjct: 64  FSRMLATHLKLEP---VFLDTRFPDLILGMKARRFDVVASALYVTP--DRVKQVDFVP-Y 117

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIV 175
              G   ++ K       +  +L G  +    G +    L          A   +   + 
Sbjct: 118 LKTGASLLVAKGSAYRPKTPDELCGKRVGSIKGASWTPKLRAISTDTCKPAGRGEIAILE 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    E  +A  +   D    D +                    ++    +   + +GD 
Sbjct: 178 FPTSPEATSALMSKAVDVQIEDAAVAQG-IPKQTNGRVEPSSTTLLYPIVIGLGVTKGDG 236

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
              + +         + E G   K      ++ T  DV   LG 
Sbjct: 237 GLQHALEGALNDAKRSGEYGSLVKKYG--LQEPTAADVAAALGT 278


>gi|15890238|ref|NP_355910.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158428|gb|AAK88695.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 283

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 16/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  + L     S +A  L ++KK+G+++       V ++ ++ +G   G  
Sbjct: 3   MTK---LAGLSALALIIGVTSASALTLEEVKKQGYIRAAT-ANEVPYSYMQPDGTSAGIG 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   A+  ++  +   + +           L++++ D  +      +  E    +AF  
Sbjct: 59  PDVANAVLKSMGIEE--VNWTVTPFGTLIPGLKARRFDFAAAE--QNISPERCKQVAFTE 114

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                G+G ++ K     +++ + ++       A  +    + D+ +A  +K   IVF  
Sbjct: 115 PNSSYGEGLLVKKGNPKKLTTYADIAKDPALKVAVVSGANNV-DFLRAVGVKEEQIVFIP 173

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR-----PSEHVILPDIISKSPLAPAIIQG 233
                      R DAY      +  L           P    ++ D   ++    A    
Sbjct: 174 ANADAIPTVQSRADAYAATELTVSELAKGQANVEQVKPFVDPVVKDAPVRNYGGFAFRPE 233

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           D E  +  +         ++  
Sbjct: 234 DKELRDAFNTALVEFRKTDDYK 255


>gi|111657794|ref|ZP_01408513.1| hypothetical protein SpneT_02001030 [Streptococcus pneumoniae
           TIGR4]
          Length = 276

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 72/228 (31%), Gaps = 10/228 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S  A   G+   +  +    N     F   + NG+  G++++  RA+      D   ++
Sbjct: 24  CSGGAKKEGEAASKKEIIVATNGSPKPFIY-EENGELTGYEIEVVRAIFKD--SDKYDVK 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGIS 138
           +        F  L + + ++   N  +T  R       +      +    ++ K    I 
Sbjct: 81  FEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KYLYAAPIAQNPNVLVVKKDDSSIK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--RVEEIDAAYRAHRCDAYTG 196
           S+  + G S  V   TT+   L  Y   H      + +     ++I       + D    
Sbjct: 139 SLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILNYTKADFQQIMVRLSDGQFDYKIF 198

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSW 243
           D        + N       ++     + P     + QG  E  + V  
Sbjct: 199 DK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQGQDELKSFVDK 245


>gi|229524912|ref|ZP_04414317.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae bv. albensis VL426]
 gi|229338493|gb|EEO03510.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           cholerae bv. albensis VL426]
          Length = 248

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 81/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNEAIKGIDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G   E  L ++ K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGANFEQLLRNHDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|271964464|ref|YP_003338660.1| extracellular solute-binding protein [Streptosporangium roseum DSM
           43021]
 gi|270507639|gb|ACZ85917.1| extracellular solute-binding protein [Streptosporangium roseum DSM
           43021]
          Length = 287

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 70/234 (29%), Gaps = 14/234 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             ++    A     +   G L    N     F   + +    GFDVD     +  +    
Sbjct: 41  ASSNAPAAAGGPKLV-SPGKLTTCTNLPYEPFQFKEGD-KVVGFDVDIVDLAAKKLGLTQ 98

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             +        +   A+ + + D+ +     T  R+    + F    +   Q  +  K  
Sbjct: 99  EIVDIDF-AVIKSGAAMAAGKCDVAAAGMTITPERQA--NIDFSVPYFDATQALLAKKGA 155

Query: 136 GISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           G+ ++ ++      +  QA TT    +           +P  F    +     ++ + D 
Sbjct: 156 GVKTLEEIKAKNLKLGAQASTTGLDYV------KKQGLNPKEFADSPKELLGLQSGQVDV 209

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHY 246
              D+  +       +   +  ++  + +       + +G D      ++    
Sbjct: 210 IVQDLPVVLTWLKKPEIADKFELVGSLDTGEQYGVGLKKGADPVLLKAINDAIT 263


>gi|91779492|ref|YP_554700.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia xenovorans LB400]
 gi|91692152|gb|ABE35350.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 285

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 75/259 (28%), Gaps = 21/259 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKAN 53
           M K   + +  +  L      S  +     + ++        +K G++     +A   + 
Sbjct: 3   MSKAIKLLLCAVTGLLLAQGASAQSCEPSKVAQKYPSLAGKTIKIGVDPESPPYAFRDSK 62

Query: 54  --GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G D D  RA+            +          AL++ QID++     +T  R 
Sbjct: 63  DFNKIIGADADMARAVFDCAGVKTE---FFTAGWPGLLPALRAGQIDVMWDLLYYTPERA 119

Query: 112 ISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGAS----ICVQAGTTTELTLADYFKA 166
                 F         G +     K I  +S+L G +    I     T  +         
Sbjct: 120 K--ETTFVTYMQAGTGGLVAAGNPKKIDDISKLCGLTVTAGIGTVELTMAQAQATKCKAE 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  +    +        +HR D    D++ +  L      P  +     + S   +
Sbjct: 178 GKPDVTIMTSADIASGARLVASHRADVMMYDLALVDGLAKQ--NPQLYTRGFMVTSGMKI 235

Query: 227 APAIIQGDTEWYNIVSWTH 245
              + +G+ +    VS   
Sbjct: 236 GVGVKKGNADMIAAVSDGL 254


>gi|330950884|gb|EGH51144.1| prephenate dehydratase [Pseudomonas syringae Cit 7]
          Length = 249

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 76/249 (30%), Gaps = 17/249 (6%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           + I          S L  + + G L          +  ++ +G+++G D+   R+L+ ++
Sbjct: 1   MGITGMAQAQDYTSHLDKVLQAGQLAVCTTGDYKPYTLLREDGEYEGIDITMARSLAKSL 60

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 +Q++P   K     + + + DI       +L R+     +              
Sbjct: 61  GVK---VQWVPTTWKNLMPDMVAGKCDIGMGGISVSLERQKKAFFSNTLDVDGKIPLVRC 117

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
             +    +V Q++  S+ +           + F   ++    + F   + I       + 
Sbjct: 118 ADQALYQTVEQINQPSVRLIEPAGGT---NEAFARAHLPKASLAFHDNKTIFQELLDKKA 174

Query: 192 DAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D    D S     +          P+ ++   +       A  + + D  W   V    +
Sbjct: 175 DVMITDASEALYQQKRMPGLCAVNPTRYMQYGEK------AYLLPRDDVTWKGYVDQWLH 228

Query: 247 AMVTAEELG 255
                 E  
Sbjct: 229 LSKATGEYQ 237


>gi|302386735|ref|YP_003822557.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
 gi|302197363|gb|ADL04934.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
          Length = 293

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 75/251 (29%), Gaps = 33/251 (13%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW---------KGFDVDF 63
             TS +              LK  +      +       ANG            G+DV  
Sbjct: 32  TGTSAAAGKETGDK----KVLKVAMECSYAPYNWTQPTDANGAVPISGSSDFAYGYDVMM 87

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + ++  +  +   ++ + L+      A+QS ++D +      T  R     + F    Y
Sbjct: 88  AKKVAEELGYE---LEIVKLDWDSLVPAVQSGKVDCVIAGQSVTAER--MQSVDFTDPYY 142

Query: 124 FDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +     ++    K +   SV+ LSGA+   Q  T             +++      E   
Sbjct: 143 YATIVTLVKAGGKYENAKSVADLSGAACTSQLNTIWYNNCLPQIPNADIQP---AQESAP 199

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS------PLAPAIIQGD 234
            +  A  + R D    D     A  +                         +  ++ +G+
Sbjct: 200 AMLVALSSGRSDLVVTDKPTGQAALVAYPDFKLLDFTGTEGEFKVSDEDVNIGISLKKGN 259

Query: 235 TEWYNIVSWTH 245
           TE  + V+   
Sbjct: 260 TELKDAVNGVL 270


>gi|288935271|ref|YP_003439330.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|288889980|gb|ADC58298.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 310

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G + D  R ++ ++     ++  +P + ++  L 
Sbjct: 61  GKFTVAVAALNSPPLTVFADDNKTLLGSETDIARLVAESLG---LEVNVVPTSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +        I     ++G  I
Sbjct: 118 VTSGKYDAAISNITVTKERKE--KFDFA-TYRKDSLGFYVKSTSPLSKIDKAEDIAGLKI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A +  R DA+ G        
Sbjct: 175 IVGSGTNQEAILLAWNAENVKKGLKPFTPVYTKDDAAQTLALQTGRADAFFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++ D+   N V       + + +         + 
Sbjct: 235 AALTGKTKLVGSVDGGWPKAAHIAVTLKKDSGLVNAVQAALNGAIASGDYAKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +     ++ 
Sbjct: 295 VESIPQSEIN 304


>gi|313111782|ref|ZP_07797575.1| hypothetical protein PA39016_004010078 [Pseudomonas aeruginosa
           39016]
 gi|310884077|gb|EFQ42671.1| hypothetical protein PA39016_004010078 [Pseudomonas aeruginosa
           39016]
          Length = 1245

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 82/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V +LCL   +            +   + +   ++ G++T    F      G ++
Sbjct: 1   MQRLQAVLLLCLACCWPGLAGALTLTPEERAWLAEHPSIRLGVDTSWPPFEFRDEQGRYQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G    +   L   +      +   P+  K     L+  +   L          E    L+
Sbjct: 61  GLAAGYVSLLQERLG-----VSLTPVEPKTWTQVLEQAKDGRLDLLPGIMATPERQEYLS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +  K   +      L G  + V         L     A +     +  
Sbjct: 116 FTRPYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             V     A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G  
Sbjct: 172 PSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
               IV     A ++AEE+   Q 
Sbjct: 230 ILAGIVDKVL-ADLSAEEIERLQA 252


>gi|227514192|ref|ZP_03944241.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087455|gb|EEI22767.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 484

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 75/240 (31%), Gaps = 14/240 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK--- 57
           M       +  L ++                       G       F     NG +    
Sbjct: 1   MKHWLKRGLTSLAVVAGVILGLMVVGSEPAHAEKTYTIGTVDTFEPFEIQDKNGTYNGKN 60

Query: 58  -GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G +++  R ++     +  K     ++      AL++ QID        T  R+    +
Sbjct: 61  PGIEIEMLREIAK---HEGFKYNLKIMSFNATLTALEAGQIDASMGGMSVTDERKA--KI 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    Y DG    + +   I+ +SQL G ++ V++GT + +        +  K     F
Sbjct: 116 DFSKSYYTDGVVMAVPENSKITKLSQLKGKTVDVKSGTASAIYANSVKDKYGFK--VKYF 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                +          A   D      L+       +  I+   I+ +P+A  + +G  +
Sbjct: 174 NTSNTMWNDVMNGNAAATFDDGPV---LQYGIRNGIKLKIVTKEINSTPVAMGVKKGQNQ 230


>gi|107099561|ref|ZP_01363479.1| hypothetical protein PaerPA_01000574 [Pseudomonas aeruginosa PACS2]
          Length = 1245

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 82/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V +LCL   +            +   + +   ++ G++T    F      G ++
Sbjct: 1   MQRLQAVLLLCLACCWPGLAGALTLTPEERAWLAEHPSIRLGVDTSWPPFEFRDEQGRYQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G    +   L   +      +   P+  K     L+  +   L          E    L+
Sbjct: 61  GLAAGYIGLLQERLG-----VSLTPVEPKTWAQVLEQAKDGRLDLLPGIMATPERQEYLS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +  K   +      L G  + V         L     A +     +  
Sbjct: 116 FTRPYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             V     A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G  
Sbjct: 172 PSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
               IV     A ++AEE+   Q 
Sbjct: 230 ILAGIVDKVL-ADLSAEEIERLQA 252


>gi|116054303|ref|YP_788748.1| hypothetical protein PA14_07500 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589524|gb|ABJ15539.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 1245

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 82/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V +LCL   +            +   + +   ++ G++T    F      G ++
Sbjct: 1   MQRLQAVLLLCLACCWPGLAGALTLTPEERAWLAEHPSIRLGVDTSWPPFEFRDEQGRYQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G    +   L   +      +   P+  K     L+  +   L          E    L+
Sbjct: 61  GLAAGYVSLLQERLG-----VSLTPVEPKTWTQVLEQAKDGRLDLLPGIMATPERQEYLS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +  K   +      L G  + V         L     A +     +  
Sbjct: 116 FTRPYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             V     A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G  
Sbjct: 172 PSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
               IV     A ++AEE+   Q 
Sbjct: 230 ILAGIVDKVL-ADLSAEEIERLQA 252


>gi|325067174|ref|ZP_08125847.1| extracellular solute-binding protein [Actinomyces oris K20]
          Length = 326

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 13/210 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83
             +K+   L  G       F+   +      GFD    +AL+  I         ++   +
Sbjct: 67  ASVKQAKKLVTGGTKTSEVFSWEDSKTKKISGFDAAIAQALARYIIGGDDARSLLEVQQV 126

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            ++ R   L +  +  +      T  R     + F    Y   Q  ++       +    
Sbjct: 127 TSETRETVLTNGTVKAVIATYTITPERAK--KIDFAGPYYASSQAILVKADNKDITGVDT 184

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
               + VQ+ +++   L  Y            F+   +  AA  + +  AY  D S L +
Sbjct: 185 LTGDVAVQSNSSSAAALKKYAPKA----TAKPFDTQAKCVAAVESGQVKAYVVDQSLLKS 240

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             L+ND+     I+ D  ++ P    + + 
Sbjct: 241 EVLSNDK---VKIVGDTFAEDPYGIGLPKD 267


>gi|310658354|ref|YP_003936075.1| histidine kinase [Clostridium sticklandii DSM 519]
 gi|308825132|emb|CBH21170.1| putative Histidine kinase [Clostridium sticklandii]
          Length = 965

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 111/307 (36%), Gaps = 21/307 (6%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASIL-------GDIKKRGFLKCGINTGLVGFAEVKA 52
           M K    +  L ++IL +      A  L         IK    +K GI+   V F     
Sbjct: 1   MKKQVIMLCFLTILILIYPINIFAAEGLNFTKEETEFIKNHPVIKLGIDPNFVPFEFYDE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           N ++KG   D+   +      +        L   E +    S++ID+L      T  RE 
Sbjct: 61  NNEYKGITADYLELIRQKTGLEFEIQ--RNLTWPEAYDKALSREIDVLPA-VSKTDEREQ 117

Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F    Y+  +  +      GI+S+  L   ++ VQ  ++    L  Y        
Sbjct: 118 H--FIFSEPYYYFKRVIVTRNDISGINSIEDLKNMTVAVQRNSSHHSYLLSY-----PNI 170

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           +  +++ VE    A        + G+++    L  +N   +   I  +   +  L  A+ 
Sbjct: 171 NLSLYDSVETALTAVADGSEKVFVGNLATTNYLIKSNGITNLKFIAFEAEKQQALYFAVR 230

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +   E  +I++    ++   +++ I  K I +   +     + R + +   S +   LG+
Sbjct: 231 KDWPELTSILNKALDSITQEDKIAINDKWI-EFEVELDYGPIIRLI-LIIGSFVAAILGV 288

Query: 292 TKDWTYR 298
           +  W  R
Sbjct: 289 SFYWIIR 295


>gi|222081096|ref|YP_002540459.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725775|gb|ACM28864.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 290

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 85/227 (37%), Gaps = 15/227 (6%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
                  ++    L  I+ RG L+  +  G   F + + +G+W G       AL+  +  
Sbjct: 29  TAAVAQTASAPGTLQAIRDRGELRIAVAPGEPWFYKDQRSGEWYGLGWGVGVALAKELGI 88

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMH 132
             + ++            LQ+ Q D++          + +L   F     ++  QG ++ 
Sbjct: 89  KATPVE---TTWGTAIAGLQAGQFDVM---FTMDATPQRALAADFPVQPMFYYAQGVLLK 142

Query: 133 KKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
               +++  +++     I V  GT+ +  +               F   +E  AA+ A R
Sbjct: 143 DGVTVTTWEEMNKPEFKIGVVLGTSPDRDITVRLPKA----TIERFPSADETGAAFVAGR 198

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            DA +    AL  L+    R S  ++LP+ I +SP +  +     + 
Sbjct: 199 MDAISLFHPALVMLQSKVKRGS--IVLPEPIRQSPSSAGVPNQADKS 243


>gi|209547795|ref|YP_002279712.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533551|gb|ACI53486.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 291

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 83/260 (31%), Gaps = 27/260 (10%)

Query: 6   FVSILCLIILFFTSFSTNA----SILGDIKKRG---------FLKCGINTGLVGFAEVKA 52
           F  +L  +   F + +  A     +L D ++R           L+   +     F     
Sbjct: 17  FGLLLAALFCGFAASAQQATPSLPLLFDARERLARPDLSSLVRLRFLTSVDFPPFNFTDQ 76

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG   GF+VD  R + S +     K Q   +   +   AL + Q D +      T   E+
Sbjct: 77  NGKLSGFNVDLAREICSELEIS-DKCQIQAIPFADLKDALAASQGDAVIAGLAVTP--EL 133

Query: 113 SLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                F          F+ +        + + LS   + V  GT  E  LA +F A    
Sbjct: 134 RRQFVFSRPYLMLPARFVRNLAVPLDGKTAAALSAHPVGVVRGTVHEAMLAAFFPA---- 189

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSP 225
                F+  + + AA +  + DA   D   L     +          +   L +      
Sbjct: 190 IKAQAFDTKDALLAALKDRKVDAAFADALQLSFWVSSPASAKCCALFDGPYLSEHFLGEG 249

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           +   + Q D+   + +    
Sbjct: 250 MTIMLRQKDSVLTSAIDHAL 269


>gi|308187412|ref|YP_003931543.1| ABC transport system periplasmic solute- binding protein precursor
           [Pantoea vagans C9-1]
 gi|308057922|gb|ADO10094.1| putative ABC transport system periplasmic solute- binding protein
           precursor [Pantoea vagans C9-1]
          Length = 298

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 86/287 (29%), Gaps = 35/287 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----NASIL-------------GDIKKRGFLKCGINT 42
           M     +++  L +    SF+        S L              DI KRG++  G N 
Sbjct: 1   MKYIKGMTLFALALSAHASFAAEPSVPAESSLHVKADPALKSLIPADILKRGYIVAGTNP 60

Query: 43  GLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDIL 100
                   K +     G ++D   A+   +      +Q+            L++ + D+ 
Sbjct: 61  NTPPTTFYKEDNKTLAGREIDIMNAVGERLG---ITVQWRDTGGFDNIIPGLKTGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N + T  R     + F         G I  K   I    S+S + G  +   +GTT  
Sbjct: 118 LSNINATPTR--LKQIDFVGYYNASLLGIISRKDADIAPFKSLSDVCGKEVGAGSGTTQV 175

Query: 158 LTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             L +       A        +F        A  + R   + G    L   +    +P  
Sbjct: 176 TRLEEASKACEAAGKQPIKVAIFPDRPAGVQAVVSGRVPLFLGPYEGLL-WQTKVIKPLT 234

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            +     ++ +P++ A  +        V     +++          N
Sbjct: 235 -MSGEITVNDAPVSVAFPKDSP-LEPAVQAALNSLIKDGSYRKILDN 279


>gi|261213264|ref|ZP_05927546.1| amino acid ABC transporter amino acid-binding portion [Vibrio sp.
           RC341]
 gi|297581955|ref|ZP_06943875.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|260837538|gb|EEX64241.1| amino acid ABC transporter amino acid-binding portion [Vibrio sp.
           RC341]
 gi|297533822|gb|EFH72663.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 248

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDAIKGIDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L    +  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRS--RDKDGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAM 228


>gi|315656986|ref|ZP_07909871.1| serine/threonine-protein kinase PknD [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492378|gb|EFU81984.1| serine/threonine-protein kinase PknD [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 298

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 72/262 (27%), Gaps = 23/262 (8%)

Query: 10  LCLIILFFTSFSTNASILGDIK------------KRGFLKCGINTGLVGFAEVKANGDWK 57
           L       ++    +     IK             R  L+  ++        + +N    
Sbjct: 21  LASCAGSTSAAGVKSYNFDSIKPDPEIVAMVPQANRETLRVVMDIPYSPAEFLDSNKQPV 80

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++VD  +ALS  +     KI     +       +     D+   +   T  R     + 
Sbjct: 81  GYEVDVMKALSKLMGVSELKIS--DEDFDAIIPKVNDGTYDVGVTSMTATKAR--MSQVN 136

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHP 173
                                  +   G  +  Q+GTT   TL        KA       
Sbjct: 137 MVTYIQSGYIYGTQAGNPKNFDPANSCGLKVAAQSGTTQAETLQANSDSCVKAGKPAIQV 196

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  E  E++     A   DA  G+   +   +  N +        +    +P  PA  + 
Sbjct: 197 VTDEDQEKLIEQVAAGTLDAIIGESPIMAYAESRNPK---FATAGEAFQVAPQGPATAKD 253

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           + +    V      M+    L 
Sbjct: 254 NPKLAKAVQAGLQKMMDTGMLK 275


>gi|222082420|ref|YP_002541785.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727099|gb|ACM30188.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 317

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 56/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L   +  G    A          G D D    ++ ++     K++ +P+   +  L L
Sbjct: 68  GTLTVAVAPGGPPLATYATDARTVVGADPDIATVIADSLG---LKLELVPVAWIDWPLGL 124

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         G  +     I S       +G    
Sbjct: 125 TSGKYDAVISNVGVTEQRKE--KFDFS-TYRQGLHGIYVKSDSKIGSIKEPKDAAGLKFI 181

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L ++ K +            ++       A  + R D      + L  + 
Sbjct: 182 VGAGTNQERILLEWSKENVAAGLKPLELQYYDDDAASLLALASGRADVIVQPHAQLVYIA 241

Query: 206 LTNDR 210
             +  
Sbjct: 242 ARDKN 246


>gi|152970453|ref|YP_001335562.1| cysteine ABC transporter periplasmic substrate binding protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238894938|ref|YP_002919672.1| cysteine ABC transport system periplasmic binding component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|329999711|ref|ZP_08303486.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|150955302|gb|ABR77332.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547254|dbj|BAH63605.1| cysteine ABC transport system periplasmic binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328538242|gb|EGF64388.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 310

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G + D  R ++ ++     ++  +P + ++  L 
Sbjct: 61  GKFTVAVAALNSPPLTVFADDNKTLLGSEADIARLVAESLG---LEVNVVPTSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +        I     ++G  I
Sbjct: 118 VTSGKYDAAISNITVTKERKE--KFDFA-TYRKDSLGFYVKSTSPLSKIDKAEDIAGLKI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A +  R DA+ G        
Sbjct: 175 IVGSGTNQEAILLAWNAENVKKGLKPFIPVYTKDDAAQTLALQTGRADAFFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++ D+   N V       + + +         + 
Sbjct: 235 AALTGKTKLVGSVDGGWPKAAHIAVTLKKDSGLVNAVQAALNGAIASGDYAKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +     ++ 
Sbjct: 295 VESIPQSEIN 304


>gi|89898553|ref|YP_515663.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56]
 gi|89331925|dbj|BAE81518.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56]
          Length = 254

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 82/263 (31%), Gaps = 24/263 (9%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +   +  ++ C I LF    S++ +   +I        G N     F  +   G   G
Sbjct: 1   MKQFTFYLKALFCGICLFLAGCSSSVNR-DEI-----WVVGTNATYPPFEFIDETGKVVG 54

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD+D   A+S  +       ++   +     L L+  +ID +      T  R+  + +  
Sbjct: 55  FDMDLAEAISEKLGKKLKVTEF---SFDALILNLKKHRIDAILSGMSITRSRQKEIAMIP 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      +  +      +  LS   S+ VQ GT  E  L               F+
Sbjct: 112 YHGEGVCELTIVSKQPISKEGILPLSQYSSVAVQTGTFLEDYLLSL-----PGVCVRSFD 166

Query: 178 RVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              E+    R  +   A      A   LK  +D  +  V LP+          I +   E
Sbjct: 167 STLEVLMEVRGKKSPIAVLEPDVARVVLKEFSDLHTTKVDLPEDWWVLGCGLGIAKDRPE 226

Query: 237 WYNIVSWTHYAMVTAEELGITQK 259
             N V          EEL     
Sbjct: 227 HINEVQKAL------EELRADGT 243


>gi|116672443|ref|YP_833376.1| extracellular solute-binding protein [Arthrobacter sp. FB24]
 gi|116612552|gb|ABK05276.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 326

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 14/191 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             IKK G L   ++      A     N    G +VD   AL+  +  +   +        
Sbjct: 71  EAIKKDGKLTVAVSPFAAPLAVYATDNKTPVGNEVDIAVALAQTLGLEADIVP---TAWA 127

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQL 143
           +  L ++S + + +  N   T  R+  L   F      D  GF       I    S   +
Sbjct: 128 DWPLGVESGKYEAVLSNVTVTEERK--LKFDFA-SYRDDKLGFYTKSDSSISKVESAPDV 184

Query: 144 SGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +G  + V +GT  E  L  + + +            ++       A ++ R D   G  +
Sbjct: 185 AGKRVIVGSGTNQESILLRWDEENKKNGLPAVEFQYYDDDSASSLALQSGRADLTFGPNA 244

Query: 200 ALYALKLTNDR 210
                  ++ +
Sbjct: 245 TAAFKAASDAK 255


>gi|326795978|ref|YP_004313798.1| methyl-accepting chemotaxis sensory transducer [Marinomonas
           mediterranea MMB-1]
 gi|326546742|gb|ADZ91962.1| methyl-accepting chemotaxis sensory transducer [Marinomonas
           mediterranea MMB-1]
          Length = 602

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 31/259 (11%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L DIKKRG ++  ++  LVG      +NG  +G D ++ RA +  +       +++  
Sbjct: 309 DKLADIKKRGVIRVAVDPALVGVTFRRSSNGAIQGLDAEYARAFADWLGVK---CEFIEH 365

Query: 84  NAKERFLALQSKQ------IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KG 136
                   L + +       D++      +   +   G+AF     +             
Sbjct: 366 PWDLLTELLFAGKEKGQPNADVVWCAVPPS---DFYQGIAFSDTYTYLKFVLCRQANDSS 422

Query: 137 ISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY-------HPIVFERVEEIDAAY 186
           I  +S L G  + V        TL +    +  +  K        + I +  +  +  A 
Sbjct: 423 IKHLSDLEGKVLGVVNDPAALTTLEEQGFRWAENEHKPGGKIKLSNLIAYGDISRVHDAL 482

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNIVSW 243
                DA+  D    +     N     H  +  I S  P      A++  +   Y+++  
Sbjct: 483 ANGSIDAFAADHPVFH-WASVNPASPWHNKVEVINSILPDPFYYSAVVSEEPSSYHLLK- 540

Query: 244 THYAMVTAEELGITQKNIN 262
                +  EE   T K ++
Sbjct: 541 AINDFI--EEFKQTSKRLD 557


>gi|93005214|ref|YP_579651.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
           K5]
 gi|92392892|gb|ABE74167.1| extracellular solute-binding protein, family 3 [Psychrobacter
           cryohalolentis K5]
          Length = 290

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 32/266 (12%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRG-------------------FLKCGINTG 43
           K  + ++  ++ +       N+S   +    G                    LK  +   
Sbjct: 2   KLLYRALPIILSVGLFGCG-NSSTQDNANAAGATVTEHKDNFVSKLPATAPTLKVAMTGD 60

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           L  F+     G+ +G DVD  RA+         K+++   + ++ F +++S + D+    
Sbjct: 61  LPPFSFQDDYGNMQGTDVDSIRAIGEE---QGFKVEFYKESWQDMFDSVESGKRDLAISG 117

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
             +   R I  GL+  P  +       +  K  I  ++ + G       G+  E TL + 
Sbjct: 118 ISYKDDRAIRYGLS-TPYFFNPATIMYLEGKFDIKDLNDIKGLKTGTLEGSKEEDTLKEM 176

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                     +                 D +  D+  L  +        +  I+P   + 
Sbjct: 177 ----GSSVELVSRSTAFLAYQDLVQGNTDVFLYDMPVLQYIIKGYPE-HKVKIVPYEAAD 231

Query: 224 SPLA---PAIIQGDTEWYNIVSWTHY 246
           +P A     + + +T+    V+    
Sbjct: 232 APSAQQVVLMAKENTKLIKSVNEGIT 257


>gi|228477082|ref|ZP_04061720.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus salivarius SK126]
 gi|228251101|gb|EEK10272.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus salivarius SK126]
          Length = 276

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 13/177 (7%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDW 56
           M K    + IL L +L   +    +      K  G    +    ++    F   K + D+
Sbjct: 1   MKKWLAGLGILGLSVLTLAACGNKSDG----KASGEKQTITVATDSDTAPFTFKKGD-DF 55

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KG+D+D  +A+      D  +++++          + S +  I + + ++   R    G 
Sbjct: 56  KGYDIDLVKAIFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEERAQKYG- 112

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            F              +    +S+  LSG +  V  G+     L ++  A+  K   
Sbjct: 113 -FSDPISRSNYAITSAEGTKYTSLDDLSGKTTEVLPGSNYAQLLENWNHANADKTPI 168


>gi|148992737|ref|ZP_01822380.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|168489364|ref|ZP_02713563.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae SP195]
 gi|168493855|ref|ZP_02717998.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|221231071|ref|YP_002510223.1| extracellular solute-binding protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225853773|ref|YP_002735285.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae JJA]
 gi|147928463|gb|EDK79478.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|183572070|gb|EDT92598.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae SP195]
 gi|183576065|gb|EDT96593.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|220673531|emb|CAR68017.1| extracellular solute-binding protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225723505|gb|ACO19358.1| ABC transporter substrate-binding protein - amino acid transport
           [Streptococcus pneumoniae JJA]
 gi|332075831|gb|EGI86298.1| bacterial extracellular solute-binding s, 3 family protein
           [Streptococcus pneumoniae GA17570]
          Length = 276

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 71/228 (31%), Gaps = 10/228 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S  A   G    +  +    N     F   + NG+  G++++  RA+      D   ++
Sbjct: 24  CSGGAKKEGQAASKKEIIVATNGSPRPFIY-EENGELTGYEIEVVRAIFKD--SDKYDVK 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGIS 138
           +        F  L + + ++   N  +T  R       +      +    ++ K    I 
Sbjct: 81  FEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KYLYAAPIAQNPNVLVVKKDDSSIK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--RVEEIDAAYRAHRCDAYTG 196
           S+  + G S  V   TT+   L  Y   H      + +     ++I       + D    
Sbjct: 139 SLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILNYTKADFQQIMVRLSDGQFDYKIF 198

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSW 243
           D        + N       ++     + P     + QG  E  + V  
Sbjct: 199 DK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQGQDELKSFVDK 245


>gi|209965980|ref|YP_002298895.1| arginine-binding periplasmic protein 1 [Rhodospirillum centenum SW]
 gi|209959446|gb|ACJ00083.1| arginine-binding periplasmic protein 1 [Rhodospirillum centenum SW]
          Length = 308

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 74/282 (26%), Gaps = 40/282 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR----GF-LKCGINTGLVGFAEVKANGD 55
           M     + ++ +++L               +      G  ++    +    F  V   G 
Sbjct: 1   MLGRRTLGVMAVLLLAACGDGGQDGAQDGARAPQQTVGTPIRVATESAYPPFVSVDPAGT 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  R +   +     +   +P +       L + + D ++     T  R   + 
Sbjct: 61  LVGFDMDVVREICQRL---DRRCDIIPQSWDGIIPGLLANRYDAITGGMTVTGERRRVVA 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISS------------------------VSQLSGASICVQ 151
             F          F     +                               L+G S+ VQ
Sbjct: 118 --FTRPYVSTPLRFFAPAGRVPEGLEGGPALITLDTLDAPEQAALERIAQALAGRSVGVQ 175

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +GTT                    ++  E +       R D    D   +     + +  
Sbjct: 176 SGTTAAEFADARLA---PGATVRRYDTHENLVLDLATGRLDVGLADSVVVEPYLASEEGK 232

Query: 212 SEHVILPDIIS---KSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              +  P I        +  A+ QGD E    +     AM  
Sbjct: 233 DTVIAGPAIEGGPVGEGIGIAVRQGDVELRQQLDGALAAMQA 274


>gi|328906826|gb|EGG26592.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium sp. P08]
          Length = 324

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 67/228 (29%), Gaps = 16/228 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            DI+K G L+ G          +  +G    G D+D+  A+   +     K+        
Sbjct: 79  DDIRKSGTLRNGAAANYAPAEFIDTDGSTVVGQDIDYITAVGKILG---LKVTTANTAFP 135

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSG 145
               A+ S + D+ + +   T  R+  + +      +  G    + K      S   L G
Sbjct: 136 SLIPAIGS-KYDVSASSFTITPERQKQVTMT---SYFKAGFSIAVPKGNPKKISPDDLCG 191

Query: 146 ASICVQA----GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            S+ VQ      TT +       KA+      + +    +        + D    D    
Sbjct: 192 HSVAVQTGTAQETTAQQKSKQCVKANKKPVDLLSYASQSDATTNVAGGKADVLYADSVIT 251

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                   +      L  I   S    A  + D      +      ++
Sbjct: 252 GYAIKQTSK---LEALGGITDASKFGVATAKNDGGLSKAIQVATQKLI 296


>gi|239818201|ref|YP_002947111.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239804778|gb|ACS21845.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 283

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             + L  IK+ G L+ G+  G   +    A+G W G  V     ++  +    + ++   
Sbjct: 32  QTNTLQKIKQSGELRIGVAPGDPWYFRDPASGTWTGLGVLLGEQVAKEMGVKMTPVE--- 88

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                   ALQ+ QID      D T  R+ ++     P+  +  QG +        + + 
Sbjct: 89  TTWGNSVAALQAGQIDA-MFVLDATEERKKAIDFPASPL-LWYAQGVLAKDGLVAKNWAD 146

Query: 143 LSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           L      I V  GT T+  L               F   +E  AA+ + R DA      A
Sbjct: 147 LDKPEVRIGVALGTATDRDLTTRLPKAK----IERFTNTDETVAAFMSGRVDAIGFYHPA 202

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           L        +    V +P  +   P +  I +     + 
Sbjct: 203 LVIAYSKIRKGK--VQVPQPVVALPTSVGIRREADAGFR 239


>gi|161520737|ref|YP_001584164.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|160344787|gb|ABX17872.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
          Length = 347

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI   L   +          GFD D  + ++  +     +++ + L   +  LAL 
Sbjct: 99  TLTIGIAPSLPPISTYATDARTVVGFDADVGQLVADTLG---RRLKIVALAWADWPLALD 155

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +        I     ++G  I  
Sbjct: 156 SGKVDAVISNVTVTEERK--QKFDFS-TYRKDQLGFYVRNDSAIRAIHEPKDVAGLRIVT 212

Query: 151 QAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L  + + +            ++       A ++ R DA     S L     
Sbjct: 213 DAGTNQEKILLAWDRDNVAHGLKPVQVQYYDDHAMRIVAVQSGRADAIFSVNSVLAYQSA 272

Query: 207 TNDR 210
              +
Sbjct: 273 QQGK 276


>gi|158523276|ref|YP_001531146.1| putative PAS/PAC sensor protein [Desulfococcus oleovorans Hxd3]
 gi|158512102|gb|ABW69069.1| putative PAS/PAC sensor protein [Desulfococcus oleovorans Hxd3]
          Length = 830

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 59/192 (30%), Gaps = 16/192 (8%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F      LI   F +    A  +     R  L          F+ V   G   GF V+  
Sbjct: 18  FLAVAALLIFAAFFNKPVAAETV-----RPPLLSAAEINYPPFSIVDDQGRAGGFSVELM 72

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA   A+     ++ +      E    L++ ++D L      T  RE  L   F      
Sbjct: 73  RA---ALGAMGREVVFRTGPWPEVRRWLETGEVDAL-PLVGRTPERE--LLFDFTVPYMS 126

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                ++ K+   I  ++ L G ++ V  G   E  L       +   +       EE  
Sbjct: 127 LHGAIVVRKETTGIQGLADLGGRTVAVMKGDNAEEFLQR----KDRGINIHSTTTFEEAL 182

Query: 184 AAYRAHRCDAYT 195
                 R DA  
Sbjct: 183 RDLSQGRADAVV 194



 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 12/160 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     F  +  NG   G++VD  RA++  +  D   I+       +    ++  
Sbjct: 273 IVVGGDHQYPPFEYLDENGRPAGYNVDLSRAIAREMGLD---IEIRLGPWAKIVQDMEEG 329

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG 153
           ++D+L        L E  L   F           I+ K      +++  L+G  I VQ  
Sbjct: 330 RVDVLQGMF---YLPERDLTFDFTQAHTVHHYVSIVRKGEGDPPATLDDLAGKRIVVQRK 386

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                   D+  A  +     + E  E +       + D 
Sbjct: 387 ----DAAHDFLVAKGLAGQLSLVESQEAVLRELAEGKHDC 422


>gi|290509325|ref|ZP_06548696.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           sp. 1_1_55]
 gi|289778719|gb|EFD86716.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           sp. 1_1_55]
          Length = 310

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 74/250 (29%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G + D  R ++ ++     ++  +P + ++  L 
Sbjct: 61  GKFTVAVAALNSPPLTVFADDNKTLLGSETDIARLVAESLG---LEVNVVPTSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +        I     ++G  I
Sbjct: 118 VTSGKYDAAISNITVTKERKE--KFDFA-TYRKDSLGFYVKSTSPLNKIDKAEDIAGLKI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A +  R DAY G        
Sbjct: 175 IVGSGTNQEAILLAWNAENVKKGLKPFTPVYTKDDAAQTLALQTGRADAYFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++ D+   N V       + + +         + 
Sbjct: 235 AALTGKTKLVGSVDGGWPKAAHIAVTLKKDSGLVNAVQAALNGAIASGDYAKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +     ++ 
Sbjct: 295 VESIPQSEIN 304


>gi|182678758|ref|YP_001832904.1| extracellular solute-binding protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634641|gb|ACB95415.1| extracellular solute-binding protein family 3 [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 281

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 75/250 (30%), Gaps = 24/250 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    S L ++++     +T+            L+         +  +  N +  GF++D
Sbjct: 27  RFLVYSFLAIVLMSSPCRATDTPGPE-------LRIASEGARPPYNYL-ENNELAGFEID 78

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + L   +       +++P +       L   + D +    D          +AF    
Sbjct: 79  LGQELCKRM---NRVCRFVPQDWDNLIPGLLDHRYDAIMAALDI--SDAAKEKIAFSEPY 133

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                  + ++++ +   S   L+G  + V+A +  +    D+F           +  +E
Sbjct: 134 VRMPMALLGNREEKLPDTSPKGLTGKKLGVEANSLYQAYAEDHFD----HSQIQTYASLE 189

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235
           E        R D   G+ + +              IL ++          +   + + D 
Sbjct: 190 EAILDLGEGRIDLVLGNKADISDFLKNRREAQNTAILGELPHDAAYLGEGIGIGLRKEDK 249

Query: 236 EWYNIVSWTH 245
           E         
Sbjct: 250 ELKRQFDQAL 259


>gi|304389687|ref|ZP_07371647.1| serine/threonine-protein kinase PknD [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304327091|gb|EFL94329.1| serine/threonine-protein kinase PknD [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 298

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 78/279 (27%), Gaps = 32/279 (11%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNASILGDIK------------KRGFLKCGIN 41
           M K             L       ++    +     IK             R  L+  ++
Sbjct: 5   MKKISAAAGAVLLAGTLASCAGSTSAAGVKSYNFDSIKPDPEIVAMVPQANRETLRVVMD 64

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                   + +N    G++VD  +ALS  +     KI     +       +     D+  
Sbjct: 65  IPYSPAEFLDSNKQPVGYEVDVMKALSKLMGVSELKIS--DEDFDAIIPKVNDGTYDVGV 122

Query: 102 RNTDWTLLRE-ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
            +   T  R      + +    Y  G      K       +   G  +  Q+GTT   TL
Sbjct: 123 ASMTATKARMSRVNMVTYIQSGYIYGTQAGNPKN---FDPANSCGLKVAAQSGTTQAETL 179

Query: 161 AD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
                   KA       +  E  E++     A   DA  G+   +   +  N +      
Sbjct: 180 QANSDSCVKAGKPAIQVVTDEDQEKLIEQVAAGTLDAIIGESPIMAYAESRNPK---FAT 236

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +    +P  PA  + + E    +      M+    L 
Sbjct: 237 AGEAFQVAPQGPATAKDNPELAKAIQAGLQKMMDTGMLK 275


>gi|222080909|ref|YP_002540272.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725588|gb|ACM28677.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 269

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 86/258 (33%), Gaps = 15/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F  +    ++L  +  + +    G + + G +  G+      F     +G   GFD
Sbjct: 1   MLRSFMTAFALPLVLAQSVIAADLPKSGLV-ENGSITYGVAATFAPFEFQ-KDGVLSGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL++ +   P  +    +  K    AL S +IDI++        R  S  + F P
Sbjct: 59  IDLIAALAAKLSAKPVPMN---MEFKGLIPALLSSRIDIINSAMYINDKR--SEQVDFIP 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLAD---YFKAHN-MKYHPI 174
                 Q  +        +     L G +I V  G   E          KA        +
Sbjct: 114 YMKIGNQVIVQAGNPAKITGRDDTLCGKTIAVTLGGIQENQARADDTRCKAKGLSGVTVL 173

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                ++   + R  R DA          L+         V+  +  S + +  A  +GD
Sbjct: 174 TLPTAQDSALSLRQGRADAEYDSTPGAVVLQAAVP-GVYEVVGGEFESNTSIGIATRKGD 232

Query: 235 TEWYNIVSWTHYAMVTAE 252
           T     +     A + A+
Sbjct: 233 TALQASIKAAL-AEIVAD 249


>gi|206578320|ref|YP_002238285.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           pneumoniae 342]
 gi|206567378|gb|ACI09154.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           pneumoniae 342]
          Length = 310

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 74/250 (29%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G + D  R ++ ++     ++  +P + ++  L 
Sbjct: 61  GKFTVAVAALNSPPLTVFADDNKTLLGSETDIARLVAESLG---LEVNVVPTSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +        I     ++G  I
Sbjct: 118 VTSGKYDAAISNITVTKERKE--KFDFA-TYRKDSLGFYVKSTSPLNTIDKAEDIAGLKI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A +  R DAY G        
Sbjct: 175 IVGSGTNQEAILLAWNAENVKKGLKPFTPVYTKDDAAQTLALQTGRADAYFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++ D+   N V       + + +         + 
Sbjct: 235 AALTGKTKLVGSVDGGWPKAAHIAVTLKKDSGLVNAVQAALNGAIASGDYAKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +     ++ 
Sbjct: 295 VESIPQSEIN 304


>gi|261250640|ref|ZP_05943215.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           orientalis CIP 102891]
 gi|260939209|gb|EEX95196.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           orientalis CIP 102891]
          Length = 248

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 79/221 (35%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  V+ +   +GF+VD    +      +  +++Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVQQD-KLQGFEVDLWDEIGKR---NDYQVEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIQGVEDLVGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L DY K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRDYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++           +    V+    AM
Sbjct: 188 TGLPLQLAGQPFETIQNAWPFVDNDNGKKLQAEVNQALAAM 228


>gi|326554078|gb|ADZ88717.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella melitensis M5-90]
          Length = 161

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 9/113 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  +++         A      K+   ++         F  +  +G   GFD
Sbjct: 1   MKSLVLAGLASVVLTVSVQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           +D   AL  A+    +K   +  +       LQ+ + D +  +   T  R+  
Sbjct: 55  LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQ 104


>gi|311103245|ref|YP_003976098.1| extracellular solute-binding protein, family 3 family protein 1
           [Achromobacter xylosoxidans A8]
 gi|310757934|gb|ADP13383.1| bacterial extracellular solute-binding protein, family 3 family
           protein 1 [Achromobacter xylosoxidans A8]
          Length = 283

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 90/290 (31%), Gaps = 25/290 (8%)

Query: 1   MYKDFFVS-------ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M+    V+        L   +L   +     +    IK    L  G +     +A +   
Sbjct: 1   MFTQILVASRLGVAHALGAFMLCTAAPMAFGA--ATIKA-DSLTVGSDLTYPPYAYMDG- 56

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GFD DF R L+S +   P    ++     +  L +++++ D ++     T  R   
Sbjct: 57  GKPAGFDADFSRLLASKLSLAP---VFVDTRFPDLILGMRARRFDTVASALYVTPERTKL 113

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLAD-----YFKAH 167
             + F P         ++   +   +    L G  +    G +    L            
Sbjct: 114 --IDFIPYLKTGASLLVLASSQYAPTGPEALCGKRVASIKGASWTPKLQKVSRETCQPKG 171

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             +   + F    E   A R+   DA   D + ++ +   +      V    ++    + 
Sbjct: 172 QGEIKVLEFPTSPEAMMALRSQAADAMIEDAAVVHGMLAQSKDSL-KVTSTSLLYPIVIG 230

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
             I +   E  + ++        + E            ++ +  +VQ  L
Sbjct: 231 LGINKESKELQSALNGALQRARDSGEYQALLARYG--LEEPSAAEVQAAL 278


>gi|266625720|ref|ZP_06118655.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           hathewayi DSM 13479]
 gi|288862375|gb|EFC94673.1| amino acid ABC transporter, amino acid-binding protein [Clostridium
           hathewayi DSM 13479]
          Length = 286

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 77/262 (29%), Gaps = 18/262 (6%)

Query: 1   MYKDFFVS-----ILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKA 52
           M K  F +      L   +         A              +K G       F  +  
Sbjct: 1   MKKRMFGTRLTGLALAASLAVGALSGCGAKTEAKAPAADGVTVVKVGTGNNAAPFCYLDE 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G+  G+D+D  + L   +  +  K     ++     +++ S  ID+LS     +  R+ 
Sbjct: 61  DGNPVGYDLDVLKELDKRL--EQYKFDIQTMDFSTLVVSIDSGSIDMLSHQLVKSEARKE 118

Query: 113 SLGLAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMK 170
                F    Y        +    GI+S++ L+G ++           +  Y +AH   +
Sbjct: 119 --KYLFPDEYYCLSPMSLCVRSDSGITSMADLAGKTMEQNPSAYEYQMMMAYNEAHPGNE 176

Query: 171 YHPIVFERVEEI--DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
              I                 + DA     +   ++         ++ L D++       
Sbjct: 177 VEIIGVSDQSTADSYKKVSNGQVDAALTYKATYDSVMDDLG--ITNLTLTDVVMCEDTYM 234

Query: 229 AIIQGDTEWYNIVSWTHYAMVT 250
              +   E    VS     M  
Sbjct: 235 MFAKDQAELVAAVSQATKEMKE 256


>gi|189353078|ref|YP_001948705.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|189337100|dbj|BAG46169.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 313

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI   L   +          GFD D  + ++  +     +++ + L   +  LAL 
Sbjct: 65  TLTIGIAPSLPPISTYATDARTVVGFDADVGQLVADTLG---RRLKIVALAWADWPLALD 121

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +        I     ++G  I  
Sbjct: 122 SGKVDAVISNVTVTEERK--QKFDFS-TYRKDQLGFYVRNDSAIRAIHEPKDVAGLRIVT 178

Query: 151 QAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L  + + +            ++       A ++ R DA     S L     
Sbjct: 179 DAGTNQEKILLAWDRDNVAHGLKPVQVQYYDDHAMRIVAVQSGRADAIFSVNSVLAYQSA 238

Query: 207 TNDR 210
              +
Sbjct: 239 QQGK 242


>gi|320011625|gb|ADW06475.1| extracellular solute-binding protein family 3 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 312

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 18/216 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             ++  G L    + G    A  + +G    G D+DF  A++  +     +++    + +
Sbjct: 64  EKVRASGTLSLASSVGAPPGAFYEEDGRTLAGADIDFADAVARKLG---LRLKREVASFE 120

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---L 143
               AL S + D+ + N   T  R  +  + F      DGQGF +     +  V+    L
Sbjct: 121 AILPALGSGKYDLGTGNFGVTEERRRT--IDFV-TYINDGQGFAVRDDSDLKKVTDLTQL 177

Query: 144 SGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            G ++   AGTT E TL +       A    Y    +     +  + R  R D      S
Sbjct: 178 CGLTVGTGAGTTFEATLEENRHRCADAGKKPYEVKTYADQAAVWISLRQGRSDVLM---S 234

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            +  L+    +      L +      +  A  +G  
Sbjct: 235 TINGLRYAVAQQEGLRFLNEFKRLD-VGFAFKKGTP 269


>gi|227894269|ref|ZP_04012074.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863912|gb|EEJ71333.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 526

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 80/289 (27%), Gaps = 29/289 (10%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-----------VKANGDWK 57
           +  L+ LF      +       K    LK G+      +             +  +  + 
Sbjct: 1   MAILLSLFIGFSFNSHETHAAKKDSNTLKIGMEANYPPYNWTQPTKSNGAVPIDGSNSYA 60

Query: 58  -GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G+DV   + +   +      +            AL S +ID++      T  R     +
Sbjct: 61  NGYDVQIAKIIGKRLHKK---VIVEKTQWDGLLPALTSGKIDLIIAGMSPTPERRK--AI 115

Query: 117 AFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            F           I +   K      ++   GA +  Q GT     +     A       
Sbjct: 116 NFSAPYRKSTFVVITNKASKYSNAKKLTDFKGAKLTAQQGTLHYDLIKQLKGAKREP--- 172

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAP 228
                   +  +  +   D Y  +     +    N        ++          S  + 
Sbjct: 173 -AMRDFSAMRQSLASGTIDGYVAEDIEFESYHNVNPNIIAVNLNKMAGFHVDHDDSVTSI 231

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
            + +G+T+  + V+ T   +   +   +  + + +  K       + +L
Sbjct: 232 GVKKGNTKLLDEVNATLRTISNKKRDQLMSQAVKEQPKAGNETKKENWL 280


>gi|262274235|ref|ZP_06052047.1| amino acid ABC transporter amino acid-binding portion [Grimontia
           hollisae CIP 101886]
 gi|262222045|gb|EEY73358.1| amino acid ABC transporter amino acid-binding portion [Grimontia
           hollisae CIP 101886]
          Length = 252

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 11/214 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G++     F  VK +   +GF++D    +      D   ++++  +    F  L++ 
Sbjct: 29  IKVGMSGRYFPFTFVKLD-KLQGFEIDVWNEIGKRADYD---VEFVTSSFSGLFGMLEAG 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
            ID +S     T  R+     AF      DG   ++ K ++ IS +  L G  + V  G+
Sbjct: 85  HIDTISNQITMTEARKA--KYAFSVPYVVDGAQVVVRKGREDISGIEDLKGKKVAVNLGS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E  L +Y KA+  + + I ++   E D A    R DA+  D  +   L   +  P + 
Sbjct: 143 NFEQLLRNYDKAN--EINIITYDSGFEQDVAL--GRTDAFVMDRVSSAQLIKKSGLPLQL 198

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P    ++ +              V      M
Sbjct: 199 AGEPFETIENAMPFLNTPEQLAKKAKVDQALTEM 232


>gi|283796750|ref|ZP_06345903.1| putative amino acid ABC transporter [Clostridium sp. M62/1]
 gi|291075636|gb|EFE13000.1| putative amino acid ABC transporter [Clostridium sp. M62/1]
          Length = 273

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 75/238 (31%), Gaps = 13/238 (5%)

Query: 1   MYKDFFVSIL-CLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M + +  + +     L  T+              +   ++ G      G+ +   NG+  
Sbjct: 1   MNRKWKRAAVYTAAALLLTACGGGGQNTESSAAAEEKVIRIGCEATTPGWIQTDENGNLS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D D    +          I+Y  +     +  L  +++D +      T  R  +  L+
Sbjct: 61  GYDYDVWMEIGKRTGYK---IEYQIMEWDGMWAMLNDERLDTVGEQISATDERREAYCLS 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                            + + S+  L  G +I  +  T+ EL +    K + +K  P+ +
Sbjct: 118 EPYAYNIYSL-LSRADNEELQSMDDLKDGMTISCETNTSDELIVEAIEKEYGVKLEPVYY 176

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           + +          RCD +    ++      T +      IL D            + +
Sbjct: 177 DGMS--VQEVALGRCDLWPRAKTSC---ITTLEEVDNLKILGDTNVLETNVYPFPKTE 229


>gi|114763121|ref|ZP_01442547.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114544174|gb|EAU47183.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseovarius sp. HTCC2601]
          Length = 240

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 50/193 (25%), Gaps = 27/193 (13%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K+  +    L +    + + +            ++ G       +  +  +G+  GF+ D
Sbjct: 2   KNILLGTAALAMTASMALAQD-----------VVRMGTEGAYPPYNFINDDGEVDGFERD 50

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L +         +++          L S   D +         RE    + F    
Sbjct: 51  LGDELCARA---ELTCEWVTNEWDSIIPNLVSGNYDTIIAGMSINDEREEV--IDFTQDY 105

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                           S        +  Q  T     +++           + +   +EI
Sbjct: 106 IPPAT-----SSYVALSEDAPLDGVVAAQTSTLQSGYISE------SGATLLEYATADEI 154

Query: 183 DAAYRAHRCDAYT 195
            +A R    DA  
Sbjct: 155 ISALRNGEADAVF 167


>gi|313107726|ref|ZP_07793908.1| hypothetical protein PA39016_001060053 [Pseudomonas aeruginosa
           39016]
 gi|310880410|gb|EFQ39004.1| hypothetical protein PA39016_001060053 [Pseudomonas aeruginosa
           39016]
          Length = 280

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 78/229 (34%), Gaps = 21/229 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            +   V    L IL   + S  A   S+  +++K G L+CG             +G + G
Sbjct: 9   IRHLLVCAGALGILLGHAPSQAADDASLWQNVQKAGVLRCGAAVAAPYVMRNAGSGQYSG 68

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           + VD CR     +     +++++  N       LQS + D+           E +L ++F
Sbjct: 69  YFVDLCRNFGEKVLK--VRVEFVDTNWDNLVAGLQSGKWDL---AMALNQTPERALAVSF 123

Query: 119 RPITYFDGQGFIMHKKKGISS-------VSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                      +++K+    S            G +  V +GT  +  +++  +    + 
Sbjct: 124 SAPATDYQVSLVVNKENPKFSGAGNAIADYDKPGVTFAVMSGTAQDKAISNVVR----QG 179

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
             +    ++E   A  + R D         +    T        +LP  
Sbjct: 180 RVMRLPGMDETRLALMSRRADVLVDASDTNH--LYTLANAWAKEVLPRP 226


>gi|126729223|ref|ZP_01745037.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [Sagittula
           stellata E-37]
 gi|126710213|gb|EBA09265.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [Sagittula
           stellata E-37]
          Length = 241

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 49/176 (27%), Gaps = 14/176 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +   G+  GF+ +    L           +++          L S
Sbjct: 25  VVRMGTEGAYPPYNFINDAGEVDGFERELGDELCKRA---ELTCEWVTNEWDSIIPNLVS 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  R+    + F                    +   L G  I  QA T
Sbjct: 82  GNYDTIIAGMSITDERDEV--IDFTQNYTQPDPSAF---LAMDGTELDLEGGVIAAQANT 136

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                +A+           + F   +E  AA R    DA   D + L  ++  N  
Sbjct: 137 IQASYVAE------QGATLLEFATPDETIAAVRNGEADAVLADKAYLEPIEAENAD 186


>gi|227326272|ref|ZP_03830296.1| ABC transporter, substrate binding protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 310

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 34  GFLKCGIN--TGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G     I         A +   N    G + D  R ++ ++     ++  +P + ++  L
Sbjct: 60  GKFTVAIAALGSSPPLAFLADDNKTVVGSEPDIARLVADSLG---LELNIVPTSWEDWPL 116

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
            + S + D    N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 117 GVASGKYDAAIINITVTKARKE--KFDFA-TYRIDSLGFYVKSTSKIQSIKEAKDIAGLK 173

Query: 148 ICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L  + K +       + P+        + + ++ R DAY G       
Sbjct: 174 IIVGSGTNQEAVLLAWDKQNRANGLPAFQPVYVTDDAAANLSLQSGRSDAYFGPNVIGA- 232

Query: 204 LKLTNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            K       +HV   +    +   +A    +G +     ++     ++ + E        
Sbjct: 233 YKAELTGKVKHVGTVNGGYPNVAHIAVTTRKG-SGLVQPINTALNGVIKSGEYDKVLNRW 291

Query: 262 NQVSKDTTNPDVQ 274
            +  +     ++ 
Sbjct: 292 GESIERIDRSEIN 304


>gi|46908519|ref|YP_014908.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 4b F2365]
 gi|47092447|ref|ZP_00230237.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 4b H7858]
 gi|217963553|ref|YP_002349231.1| L-cystine-binding protein TcyK [Listeria monocytogenes HCC23]
 gi|226224894|ref|YP_002759001.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes Clip81459]
 gi|254825076|ref|ZP_05230077.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254854301|ref|ZP_05243649.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|254933323|ref|ZP_05266682.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|255521709|ref|ZP_05388946.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes FSL J1-175]
 gi|284802790|ref|YP_003414655.1| hypothetical protein LM5578_2547 [Listeria monocytogenes 08-5578]
 gi|284995932|ref|YP_003417700.1| hypothetical protein LM5923_2497 [Listeria monocytogenes 08-5923]
 gi|290893636|ref|ZP_06556618.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|300763903|ref|ZP_07073899.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes FSL N1-017]
 gi|46881791|gb|AAT05085.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019224|gb|EAL09967.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes str. 4b H7858]
 gi|217332823|gb|ACK38617.1| L-cystine-binding protein TcyK [Listeria monocytogenes HCC23]
 gi|225877356|emb|CAS06070.1| Putative amino acid ABC transporter (binding protein) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258607693|gb|EEW20301.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|284058352|gb|ADB69293.1| hypothetical protein LM5578_2547 [Listeria monocytogenes 08-5578]
 gi|284061399|gb|ADB72338.1| hypothetical protein LM5923_2497 [Listeria monocytogenes 08-5923]
 gi|290556838|gb|EFD90370.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|293584884|gb|EFF96916.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293594319|gb|EFG02080.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300515244|gb|EFK42295.1| amino acid ABC transporter, amino acid-binding protein [Listeria
           monocytogenes FSL N1-017]
 gi|307571871|emb|CAR85050.1| polar amino acid ABC transporter, substrate-binding protein
           [Listeria monocytogenes L99]
          Length = 269

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 74/216 (34%), Gaps = 5/216 (2%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G  T       +  NG   G+DV+  + +   +       ++  ++     ++L +
Sbjct: 36  TITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKF--KFKTMDFSNLLVSLGA 93

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            ++DI++   + +  RE            F  Q  ++     I+S   L+G  +   A +
Sbjct: 94  GKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATS 153

Query: 155 TTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
              L L    +     +      +   +     +  R DA     +             +
Sbjct: 154 NGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATIS--TPFAVDFQNKTSAIK 211

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
             ++ D++S + +   + + +T+    V     +++
Sbjct: 212 EKVVGDVLSNAKVYFMLGKDETKLSKDVDEALQSII 247


>gi|218889316|ref|YP_002438180.1| hypothetical protein PLES_05721 [Pseudomonas aeruginosa LESB58]
 gi|218769539|emb|CAW25299.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 1245

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 82/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V +LCL   +            +   + +   ++ G++T    F      G ++
Sbjct: 1   MQRLQAVLLLCLACCWPGLAGALTLTPEERAWLAEHPSIRLGVDTSWPPFEFRDEQGRYQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G    +   L   +      +   P+  K     L+  +   L          E    L+
Sbjct: 61  GLAAGYVGLLQERLG-----VSLTPVEPKTWTQVLEQAKDGRLDLLPGIMATPERQEYLS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +  K   +      L G  + V         L     A +     +  
Sbjct: 116 FTRPYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             V     A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G  
Sbjct: 172 PSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
               IV     A ++AEE+   Q 
Sbjct: 230 ILAGIVDKVL-ADLSAEEIERLQA 252


>gi|310768125|gb|ADP13075.1| Cysteine transport protein (ABC superfamily) [Erwinia sp. Ejp617]
          Length = 313

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 79/250 (31%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++     ++  +P + ++  L 
Sbjct: 64  GKFTVAVAALNSPPLTLFSDDNTTLLGSEVDIARLVADSLG---LQLNVVPTSWEDWPLG 120

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +    K   I+    ++G  I
Sbjct: 121 VSSGKYDAAITNVTVTKARKE--KFDFA-TYRRDSLGFYVKSDSKIAAITKAEDIAGLRI 177

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +  K    + P   +       A ++ R DAY G        
Sbjct: 178 IVGSGTNQEAILLAWEEQNQKKGLKPFVPNYVKDDAAQTLALQSGRADAYFGPNVIGAWK 237

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +  +   +     K+      ++ D      V+     ++   E         + 
Sbjct: 238 AALTGKTRQVGTVDGGWPKAAHIAVTLKKDGGLVTAVNAALNGVIKGGEYDKVLNRWGEG 297

Query: 265 SKDTTNPDVQ 274
            +   + ++ 
Sbjct: 298 IERLDHSEIN 307


>gi|310820157|ref|YP_003952515.1| amino acid ABC transporter permease [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393229|gb|ADO70688.1| Amino acid ABC transporter, permease protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 482

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 20/252 (7%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKAN--GDWKGFDVDFCR 65
           +L +            S L  +++ G L+ G +  G   +A    +  G ++GF+V+   
Sbjct: 1   MLVVWGALTACHRDAGSGLERVRRAGVLRWGADAQGGEPYAMEDPSRPGQYQGFEVELAD 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQ-SKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           AL   +      +Q    +      AL+     D+     + T  R     + F    Y 
Sbjct: 61  ALGRELGVRAELVQ---NDWSNLIPALERGGSFDVAMNGMEITPARAG--RVLFTRPYYL 115

Query: 125 DGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                +  +    +S +  L G  +   + +     L             I +E VEE  
Sbjct: 116 FNLLLMARRDDASVSGLESLRGRRVGTLSNSLAWDLL------LKSGAQAIPYEGVEEPY 169

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                 R DA   D     A +     P   +     + +   A A+ +G+ +    +  
Sbjct: 170 IDLEQGRLDAVLMDDLI--AQRYGL--PKAALRSVGEVGQGYYAIAVRRGEEDLRQALDE 225

Query: 244 THYAMVTAEELG 255
               +  + EL 
Sbjct: 226 ALGRIARSGELR 237


>gi|327190599|gb|EGE57688.1| extracellular solute-binding protein family 3 [Rhizobium etli
           CNPAF512]
          Length = 314

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 38/235 (16%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS------------------ILGDIK-----KRGFLKCG 39
           +      + +  + F S                         + +IK     + G L  G
Sbjct: 8   RLLIAGAVTIGAIGFGSAEAQQKFDLSPEQPNRLRVEKNEKRIAEIKDFKFAENGVLTVG 67

Query: 40  IN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           I+    L        +    G+DVD  +A++ ++     K+  + +   +  L L S + 
Sbjct: 68  ISSSGNLPLHDYASDSKTVIGYDVDLAQAIADSL---DLKLNLVSVAWADWPLGLTSGKF 124

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQAGT 154
           D +  N   T  R+      F      D  GF +     I+S      ++G  +   AGT
Sbjct: 125 DAVISNVTVTEERKE--KFDFS-TYRKDELGFYVRADNPITSIKDPKDIAGLKVITDAGT 181

Query: 155 TTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYALK 205
             E  L ++ + +    +K   + +   + +   A ++ R DA     +      
Sbjct: 182 NQEKILLEWDRQNVAAGLKPMEVQYYDDDAVKDLAVQSGRADAVFSVNATQAYAA 236


>gi|29833752|ref|NP_828386.1| ABC transporter substrate-binding protein [Streptomyces avermitilis
           MA-4680]
 gi|29610876|dbj|BAC74921.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 341

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 64/198 (32%), Gaps = 16/198 (8%)

Query: 23  NASILGDIKKRGFLKCGINT---GLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           +A +   + K G L  G+     G      V  +     G + D  R +++ +   P   
Sbjct: 72  SAELPESVAKSGKLVIGVGGLPSGSAPLNYVGEDQKTLTGVEPDLGRLVAAVLGLKPE-- 129

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
                  +  F+ + S + D+   N   T  R+      F      D   F   KK   +
Sbjct: 130 -LKNSTWENLFVGIDSGKSDVGFSNITVTEERKK--KYEFA-SYRQDNLAFEAAKKNNWN 185

Query: 139 SVSQ---LSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                  L+G ++ V AGT  E  L ++         K     F+       A  + + D
Sbjct: 186 FDGDYKNLAGQTVAVGAGTNQERILLEWKAKLAKEGKKLTVKYFQDNNSTYLALSSGKID 245

Query: 193 AYTGDISALYALKLTNDR 210
           AY G   A         +
Sbjct: 246 AYFGPSPAFAYHVTRVAK 263


>gi|296447400|ref|ZP_06889326.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
 gi|296255103|gb|EFH02204.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
          Length = 254

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 58/211 (27%), Gaps = 12/211 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  + A+    GF++D  R +   I    ++ +++    +     L +K
Sbjct: 25  LRVASEGARPPFNYLDADNRLAGFEIDLMREICKRI---DAECEFVTQEWENLVPGLVAK 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q D++    + T  R   +  +               +         L    + V+A + 
Sbjct: 82  QYDLVVAAMEITEERRRRIAFSAPYAHTPSSLVVDRERTLAGVDAGALKELRVGVEAESA 141

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +    D             +  +E         R D    D  A               
Sbjct: 142 QQAYFEDKLP----NVELRRYATLEAAMLDLSEDRIDVVADDKLAAVEFLKNRREGRCCR 197

Query: 216 ILPDIISKSPL-----APAIIQGDTEWYNIV 241
           I  D+   +          + Q D+   + V
Sbjct: 198 IAADLPQDADYFGAGLGVGLRQEDSALKSSV 228


>gi|312963435|ref|ZP_07777917.1| sensory box-containing diguanylate cyclase [Pseudomonas fluorescens
           WH6]
 gi|311282241|gb|EFQ60840.1| sensory box-containing diguanylate cyclase [Pseudomonas fluorescens
           WH6]
          Length = 1247

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 80/269 (29%), Gaps = 16/269 (5%)

Query: 10  LCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           + L+ L   + +  A  L D ++        L  G++     F     +G + G   D+ 
Sbjct: 7   VILLSLLTWTATAGALTLTDDERSWLTDHQELSLGVDASWPPFEYRDEDGRYHGLSADYV 66

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R +   +      ++   + +      L+  + + L+         E    LAF      
Sbjct: 67  RLIQDRLG-----VRIKLVESPSWSAVLEMARNNQLNLIPSIMSTPERQHYLAFTRPYID 121

Query: 125 DGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                + H+      ++  L G  + V         L    + H+   + +    V    
Sbjct: 122 FPMVILAHEGGARPRNLKDLYGLKVAVVENYAPHELL----RTHHPDLNLVALPNVSSTL 177

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A      DA   D+++             +V          LA  + + D     I+  
Sbjct: 178 QALATGEVDAVVSDLASSVWSLRELKLDGLYVSGETPYRYQ-LAMGVPRDDKMLVGILDK 236

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPD 272
               +   E   I Q  +   + + T  +
Sbjct: 237 VLADLSPTETDAIQQHWVGSATDNRTFWN 265


>gi|15900086|ref|NP_344690.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae TIGR4]
 gi|14971614|gb|AAK74330.1| ABC transporter, substrate-binding protein [Streptococcus
           pneumoniae TIGR4]
          Length = 276

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 10/228 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S  A   G+   +  +    N     F   + NG+  G++++  RA+      D   ++
Sbjct: 24  CSGGAKKEGEAASKKEIIVATNGSPKPFIY-EENGELTGYEIEVVRAIFKD--SDKYDVK 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGIS 138
           +        F  L + + ++   N  +T  R       +      +    ++ K    I 
Sbjct: 81  FEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KYLYAAPIAQNPNVLVVKKDDSSIK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTG 196
           S+  + G S  V   TT+   L  Y   H      + + + +  +I       + D    
Sbjct: 139 SLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILNYTKADLQQIMVRLSDGQFDYKIF 198

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSW 243
           D        + N       ++     + P     + QG  E  + V  
Sbjct: 199 DK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQGQDELKSFVDK 245


>gi|330815050|ref|YP_004358755.1| Prephenate dehydratase [Burkholderia gladioli BSR3]
 gi|327367443|gb|AEA58799.1| Prephenate dehydratase [Burkholderia gladioli BSR3]
          Length = 286

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 71/239 (29%), Gaps = 15/239 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L ++  RG L+         ++  + +G ++G D+D   +L+ ++     + +Y+  +
Sbjct: 55  SRLDEVLARGVLRVCTTGDYRPYSYYRPDGRFEGIDIDLAESLARSL---KVRTEYVKTS 111

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK----GISSV 140
            +       + + DI       TL  +      F   T  DG+  I+           + 
Sbjct: 112 WRALTDDFVA-RCDIAVGGISTTL--DRQQRAFFTRPTMQDGKTPIVRCADVGRYQSVAQ 168

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  + V  G T E     Y     +  HP        I       R D    D S 
Sbjct: 169 IDQPATRVIVNPGGTNERFARQYLGHAQLSVHP----DNVTIFREILDGRADVMVTDASE 224

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               +   +     V           A  + +GD  +   V    +      E      
Sbjct: 225 TL-WQQKLNPGLCSVHPEQPFQFGEKAYMVPRGDVVFQQYVDQWLHLARETGEFQAVTD 282


>gi|170693261|ref|ZP_02884421.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170141791|gb|EDT09959.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 313

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            +  L  GI  G    +          GFD D  + ++ ++      +  + L   +  L
Sbjct: 62  AKNALTVGIVVGHPPISTYASDARTVVGFDPDLAQLIADSLGK---HLNVVILAWPDWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           +L S ++D +  N   T  R+      F      D  GF +     I        ++G  
Sbjct: 119 SLASGKVDAVISNVTVTEERKA--KFDFS-TYRQDQIGFYVRTDSPIRQIAEPKDIAGLR 175

Query: 148 ICVQAGTTTELTLADYFK---AHNMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYA 203
           I   AGT  E  L ++ +   A  +K   + +   + + + A ++ R DA     +AL  
Sbjct: 176 IITDAGTNQEKILLEWDRQNVARGLKPVSVQYYDDDAVRSVALQSGRADAILSVNAALAY 235

Query: 204 LKLTNDR 210
                 +
Sbjct: 236 DAARQGK 242


>gi|86356186|ref|YP_468078.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86280288|gb|ABC89351.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 268

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 71/220 (32%), Gaps = 14/220 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GF+VD  R +   +     K Q   +   +   AL + 
Sbjct: 37  LRFLTSVDFPPFNFTDQNGKLSGFNVDLAREICGELEIS-DKCQIQAMPFTDLKDALAAS 95

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+ +        + + LS   + V  G
Sbjct: 96  QGDAVIAGLAVTP--ELRRQFLFSRPYLMLPARFVRNLAAPLDGKTAAALSNHPVGVVKG 153

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  LA +F A   +     F+  + + AA +  + DA   D   L     +      
Sbjct: 154 TVHEAMLAAFFPALKAQ----AFDTKDALLAALKERKVDAAFADALQLSFWVSSLASDKC 209

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +   L +      +   + Q D+   + +     A+
Sbjct: 210 CALFDGPYLSEQFLGEGMTIMLRQKDSVLTSAIDHALAAL 249


>gi|307705667|ref|ZP_07642515.1| L-cystine-binding protein tcyA [Streptococcus mitis SK597]
 gi|307620772|gb|EFN99860.1| L-cystine-binding protein tcyA [Streptococcus mitis SK597]
          Length = 276

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 10/228 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S  A   G+   +  +    N     F   + NG+  G++++  RA+      D   ++
Sbjct: 24  CSGGAKKEGEAASKKEIIVATNGSPKPFIY-EENGELTGYEIEVVRAIFKD--SDKYDVK 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGIS 138
           +        F  L + + ++   N  +T  R       +      +    ++ K    I 
Sbjct: 81  FEKTEWSGVFAGLDADRYNMAVNNLSYTKERAE--KYLYAAPIAQNPNVLVVKKDDSSIK 138

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--RVEEIDAAYRAHRCDAYTG 196
           S++ + G S  V   TT+   L  Y   H      + +     ++I       + D    
Sbjct: 139 SLADIGGKSTEVVQATTSAKQLEAYNAEHPDNPTILNYTKADFQQIMVRLSDGQFDYKIF 198

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSW 243
           D        + N       ++     + P     + QG  E  + V  
Sbjct: 199 DK-IGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQGQDELKSFVDK 245


>gi|291563077|emb|CBL41893.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [butyrate-producing
           bacterium SS3/4]
          Length = 323

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 13/225 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           LG +   G +  G +     +          ++ G DV+  + ++  +  +   ++  P+
Sbjct: 78  LGKVLAAGKITMGTSPDFAPWEFKDVSSGTTEYVGADVELAKYIAEKLGVE---LEIKPM 134

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFIMHKK--KGISSV 140
                  A+ S  ID+      +T  R  ++GL+ R       GQG ++ K+     ++ 
Sbjct: 135 EFSAIQQAVTSGNIDMGISGFAYTDERAEAMGLSERYNVNTKKGQGLLVKKELASQYNTA 194

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
              +G  +  Q  T       +   +        +   + +        + DA       
Sbjct: 195 ESFAGKKVATQNATLQNKLATEQLPS---DVQIQLVTSITDGVMMLTTGKVDALAVSGDN 251

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +L  T D  +    + D  S      A+ +GD +  N ++   
Sbjct: 252 GESLAKTYDDIAMADFMFD-YSSEGNVIAVKKGDDDLLNAINEVI 295


>gi|229591530|ref|YP_002873649.1| putative ABC transporter substrate-binding protein [Pseudomonas
           fluorescens SBW25]
 gi|229363396|emb|CAY50558.1| putative substrate-binding component of ABC transporter
           [Pseudomonas fluorescens SBW25]
          Length = 268

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 73/251 (29%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K   + +   + L          +   +K    L                    +G  
Sbjct: 1   MHKRRALLVAVSLGLCSQWAFAAPQVPERLKSVDKLTYCSGMDSPPLVSFDEAQKPRGLT 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++  + D   ++Q+  +       AL ++Q D++         R   + +    
Sbjct: 61  VDLGLEIAKRLGDK--QVQWRVIPFSGLVPALLAQQCDMIVDQLFDKPERRQVIDI---V 115

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY----FKAHNMKYHPI 174
              +  Q  ++ K     I ++  LSG  + V  G+T +  L        KA       +
Sbjct: 116 NYMYSSQSVVVPKGNPKGIKALDDLSGHKVAVLNGSTIKTLLDTQNDSLAKAGKPPMKLV 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           V+    +   A R  + DAY                P          S+      I + D
Sbjct: 176 VYNTDTDAFQALRISQVDAYGTT-VETAGYYAAMA-PDLFQEGVPAFSRILTGLGIRKDD 233

Query: 235 TEWYNIVSWTH 245
            +    V    
Sbjct: 234 PQLTAAVQQII 244


>gi|297190457|ref|ZP_06907855.1| glutamate-binding protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197723206|gb|EDY67114.1| glutamate-binding protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 301

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 87/231 (37%), Gaps = 15/231 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            +     ++   + ST       +   G   +   ++  L G +   +N D  G D    
Sbjct: 21  AATAVATLVSLAACSTEEPRPEFL---GVNRVTVAMHNDLPGLSYS-SNYDRSGLDFLLL 76

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + +   +  D +  + + +++ +R   L  ++ D+   +   T  R     + F      
Sbjct: 77  QHIEEEL--DVAFSEPVDVSSGDRVTQLLERKADMTIASFSITAER--MDEIDFVGPYLT 132

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
             QGF++     + +++ L G +IC   GTT++  L D          P+  +   +   
Sbjct: 133 TRQGFLVAADSDVETLADLRGTTICTWEGTTSQEALDDILDTVGAD--PVTLDDASDCID 190

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQG 233
              A +  A + D + LY     +++     ++PD+   +P      + +G
Sbjct: 191 QLIAGQVQAVSTDQAILYGFARQHEKDG-LRVVPDVTIGAPQHYGIGLPKG 240


>gi|209552108|ref|YP_002284024.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539701|gb|ACI59632.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 270

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 83/263 (31%), Gaps = 23/263 (8%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKA-NGD 55
           M   +   +     ++ F + S  A        I+ RG L+CG              +G+
Sbjct: 1   MKILNMIATAAIAGLMVFAAASAQAQEPGYWQKIQSRGTLRCGAAVA-PPHVMRDPASGE 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G  +D C+ ++  +      I     +       LQ+ + D+   +       + +L 
Sbjct: 60  FSGAFIDLCKEIADVVGVKAEVID---TSWDNIVAGLQADRWDM---SLALNRTPKRALA 113

Query: 116 LAFRPITYFDGQGFIMHKKKG-----ISSVSQLS--GASICVQAGTTTELTLADYFKAHN 168
           +AF    +      + +K          S++     G +I + +GT  E  L+   K   
Sbjct: 114 IAFTDSAWDYQVSIVHNKANPKIDGSWKSLADFDKAGVTIAIMSGTAQEQILSTQIK--- 170

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                +     +    A  + R D    D          N      V+    I+K  +  
Sbjct: 171 -NATLLRLPDNDATRLALMSRRADVLVDDADTNLLFTTKNGEDWVTVLPEPAIAKQGVGM 229

Query: 229 AIIQGDTEWYNIVSWTHYAMVTA 251
            + +  T     V    +A   A
Sbjct: 230 GLPRNVTGADLAVINLLFAEKIA 252


>gi|33596590|ref|NP_884233.1| putative extracellular solute-binding protein [Bordetella
           parapertussis 12822]
 gi|33573291|emb|CAE37272.1| putative extracellular solute-binding protein [Bordetella
           parapertussis]
          Length = 306

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 83/283 (29%), Gaps = 33/283 (11%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTG 43
           M +  FV   +L +      + S + S                L   K  G ++ G    
Sbjct: 3   MRRFNFVKWGLLMVGAGLLAACSDSDSSDPGAAQQPAAQSASTLDAAKAAGKIRIGY-AN 61

Query: 44  LVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              +A + +      G  V+  R +   +  D   ++ +          LQ+K+ DI++ 
Sbjct: 62  EAPYAYMDSKEARVTGESVEIARVVLKRMGIDE--VEGVLTEFGSLIPGLQAKRFDIIAA 119

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R     +AF   TY  GQ F++ K    +  S    A             +  
Sbjct: 120 GMYVTPER--CQQVAFSDPTYGVGQAFLVQKGNPKNLHSYADVAKNGEAKLGVVVGAIEA 177

Query: 163 YFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGD--------ISALYALKLTNDRPS 212
            +           +VF       +   A R DAY                  KL    P 
Sbjct: 178 EYATKQEIPAGQVVVFPGAVSALSGIEAGRADAYAATALTVNDLMHKTSAGDKLEKADPF 237

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +     +   A A  + D  + +  +      V ++E  
Sbjct: 238 TDPTVDGKSVRGYGAFAFRKDDQAFADAFNAELKKFVGSDEHR 280


>gi|221196384|ref|ZP_03569431.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
 gi|221203056|ref|ZP_03576075.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221176990|gb|EEE09418.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221182938|gb|EEE15338.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
          Length = 294

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 14/184 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI   L   +          GFD D  + ++  +     +++ + L   +  LAL+
Sbjct: 46  TLTIGIAPSLPPISTYATDARTVVGFDADVGQLVADTLG---RRLKIVALAWADWPLALE 102

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I +      ++G  I  
Sbjct: 103 SGKVDAVISNVTVTEERK--QKFDFS-TYRKDQLGFYVRNDSAIRAIREPKDVAGLRIVT 159

Query: 151 QAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L  + + +            ++       A ++ R DA     S L     
Sbjct: 160 DAGTNQEKILLAWDRDNVAHGLKPVQVQYYDDHAMRIVAVQSGRADAVFSVNSVLAYQSA 219

Query: 207 TNDR 210
              +
Sbjct: 220 QQGK 223


>gi|300790864|ref|YP_003771155.1| ABC transporter substrate-binding protein [Amycolatopsis
           mediterranei U32]
 gi|299800378|gb|ADJ50753.1| ABC transport system substrate-binding protein [Amycolatopsis
           mediterranei U32]
          Length = 259

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 88/250 (35%), Gaps = 16/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++   ++   T+   + S          L+ G  +     A    NG++ GFD
Sbjct: 1   MKKTLVTALTATLLAALTACGGSDSGGDK-----TLRVGTLSDSKPNAYQ-ENGNYTGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  +A+++    +  K+++           + +   DI S     T  R+ +  + F  
Sbjct: 55  NELLKAIAAK---EGLKLEFAATEFSALLGQVANGTFDIGSSAISQTDARKKT--VDFSA 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              +   G    +  GI+  + L+G  I V  GT ++  L      +      + F    
Sbjct: 110 PYNYQALGIEAKETAGITDENSLAGKRIGVVQGTVSDTWL----GTNAPTAQAVRFPNDA 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A +    D    D  A       N+  ++  +   I +  P   A  +G+T+  N 
Sbjct: 166 AALNALKTGAIDGAVFDQ-ATAEDYAKNNADAKLKVTKAITTTIPHGFAFKKGNTDLINK 224

Query: 241 VSWTHYAMVT 250
           ++     ++ 
Sbjct: 225 INDGLKKVIA 234


>gi|313836986|gb|EFS74700.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL037PA2]
 gi|314929424|gb|EFS93255.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL044PA1]
 gi|314971492|gb|EFT15590.1| bacterial extracellular solute-binding protein, family 3
           [Propionibacterium acnes HL037PA3]
          Length = 308

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 67/228 (29%), Gaps = 16/228 (7%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            DI+K G L+ G          +  +G    G D+D+  A+   +     K+        
Sbjct: 63  DDIRKSGTLRNGAAANYAPAEFIDTDGSTVVGQDIDYITAVGKILG---LKVTTANTAFP 119

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSG 145
               A+ S + D+ + +   T  R+  + +      +  G    + K      S   L G
Sbjct: 120 SLIPAIGS-KYDVSASSFTITPERQKQVTMT---SYFKAGFSIAVPKGNPKKISPDDLCG 175

Query: 146 ASICVQA----GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            S+ VQ      TT +       KA+      + +    +        + D    D    
Sbjct: 176 HSVAVQTGTAQETTAQQKSKQCVKANKKPVDLLSYASQSDATTNVAGGKADVLYADSVIT 235

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                   +      L  I   S    A  + D      +      ++
Sbjct: 236 GYAIKQTSK---LEALGGITDASKFGVATAKNDGGLSKAIQVATQKLI 280


>gi|323493779|ref|ZP_08098897.1| putative amino-acid ABC transporter-binding protein PatH [Vibrio
           brasiliensis LMG 20546]
 gi|323311913|gb|EGA65059.1| putative amino-acid ABC transporter-binding protein PatH [Vibrio
           brasiliensis LMG 20546]
          Length = 248

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 80/221 (36%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  V+ +   +GF+VD    +      +  K++Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVQQD-QLQGFEVDLWDEIGKR---NDYKVEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIKGVKDLEGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L DY K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRDYDK--DGKINIKTYDTGIE--HDVALGRADAFIMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGQPFETIQNAWPFVDNENGKKLQAEVNQALAAM 228


>gi|312961014|ref|ZP_07775519.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311284672|gb|EFQ63248.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 269

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 77/252 (30%), Gaps = 14/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K     ++ + +   T ++     +   ++K   L                    +G 
Sbjct: 1   MHKQRRALLVAVTLGLCTQWAFAAPQVPERLQKVDKLTYCSGMDSPPLVSFDEAQKPRGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD    ++  + D   ++Q+  +       AL ++Q D++         R   + +   
Sbjct: 61  TVDLGLEIAKRLGDK--QVQWRVIPFSGLVPALLAQQCDMIVDQLFDKPERRQVIDI--- 115

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHP 173
               +  Q  ++ K     I ++  LS   + V  G+T +  L     +  KA       
Sbjct: 116 VNYMYSSQSVVVPKGNPKGIKTLDDLSAHKVAVLNGSTIKTLLDTQNENLAKAGKPPMKL 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +V+    +   A R  + DAY                P          S+      + + 
Sbjct: 176 VVYNTDTDAFQALRISQVDAYGTT-VETAGYYAAMA-PELFQEGVPAFSRILTGLGMRKD 233

Query: 234 DTEWYNIVSWTH 245
           D +    V    
Sbjct: 234 DPQLTAAVQQII 245


>gi|161613904|ref|YP_001587869.1| hypothetical protein SPAB_01642 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161363268|gb|ABX67036.1| hypothetical protein SPAB_01642 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 253

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +SI+ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSIIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|254430808|ref|ZP_05044511.1| extracellular solute-binding protein, family 3 [Cyanobium sp. PCC
           7001]
 gi|197625261|gb|EDY37820.1| extracellular solute-binding protein, family 3 [Cyanobium sp. PCC
           7001]
          Length = 313

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 97/272 (35%), Gaps = 31/272 (11%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPL 83
           +    + G L  G+      + +  A G  +G+ +D    +++ +      P K+     
Sbjct: 43  IERAARTGELALGVAGSAPPYMQEDAQGALQGYAIDVAGLIAAEVSDYLGRPVKVVGETT 102

Query: 84  NAKER-FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           ++++  F  + + ++D++     +T  RE  + + F       G   +        +   
Sbjct: 103 DSQDALFRQVHNGEVDLMCGA-QFTWERE--MFVDFSIPFALSGIRLLTQDGALDGTPDS 159

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  I V  G+  E T+    KA       +    +     A    R DA  GD   L 
Sbjct: 160 LQGKRIGVVNGSLGEATV----KALQPSARLVPVADLAAGMQALAQGRVDALGGDSVLLA 215

Query: 203 ALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           +     +  +PS    +        +  A+ + ++   N+V+     ++          N
Sbjct: 216 SAAKGSSLKQPSLVPTMALNRYA--VGCAMPENNSTLRNLVNLAIAKLLQG------YVN 267

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            +  S++     V R+LG D +      LGL 
Sbjct: 268 GDSASREL----VNRWLGPDST------LGLP 289


>gi|311895723|dbj|BAJ28131.1| putative ABC transporter substrate-binding protein [Kitasatospora
           setae KM-6054]
          Length = 294

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 70/237 (29%), Gaps = 20/237 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN-AK 86
             ++K G L  G +             +  G D    + L S +     ++++       
Sbjct: 36  ERVRKAGVLTVGSSFTAAPVVYRNDRNEPDGLDPHLAQKLGSLLG---VRVEFQDAGVFA 92

Query: 87  ERFLALQSKQIDILSRNTDWTLLRE---------ISLGLAFRPITYFDGQGFIMHKKKG- 136
                L   + DI       T  RE         ++ G+ F    +  G G  + K    
Sbjct: 93  NVLPGLLGGKYDIAMSGITDTREREQGLDKNGKQVNAGVDFVD-YFMAGIGIAVDKGNPK 151

Query: 137 -ISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
            I+ + +L G ++ V+ GTT     A               +  +         +    D
Sbjct: 152 EITDIDRLCGHTVTVKKGTTHADLAARQKAVCDPAGRPLTIMETDSDNAAIENLK-GPAD 210

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           AY  D         T    +   I    I   P   A+ + D    +++      ++
Sbjct: 211 AYITDYPKATYAVQTVGNGTLFDIGGPQIQPRPFGIALRKEDGRLRDVLMRAMNRLI 267


>gi|99081553|ref|YP_613707.1| extracellular solute-binding protein [Ruegeria sp. TM1040]
 gi|99037833|gb|ABF64445.1| extracellular solute-binding protein family 3 [Ruegeria sp. TM1040]
          Length = 235

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 64/221 (28%), Gaps = 19/221 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +   G+  GF+ +    L           +++  +       L S
Sbjct: 22  TIRLGTEGAYPPYNFINDAGEVDGFERELGDELCKRA---ELTCEWVTNDWDSIIPNLLS 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  R+    ++F                  +S    ++ + +  Q+GT
Sbjct: 79  GNYDAIIAGMSITDERKEV--VSFTEGYTKPSPS----AYAALSEGVDVNASVVAAQSGT 132

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +A+           + F   +E  AA  +   D    D   L  +       S+ 
Sbjct: 133 IQAAHVAE------TGATLVEFPTPDETIAAVNSGEVDVVLSDKDFLAPIVEE----SDL 182

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           V L D+     +  A  Q D E          +M     L 
Sbjct: 183 VFLGDVYLGGGIGMAFRQSDDEMRGKFDAAIASMKEDGSLN 223


>gi|298508712|pdb|3N26|A Chain A, Cpn0482 : The Arginine Binding Protein From The Periplasm
           Of Chlamydia Pneumoniae
          Length = 246

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 9/211 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             G N     F  V A G+  GFD+D  +A+S  +       ++         L L+  +
Sbjct: 13  IVGTNATYPPFEYVDAQGEVVGFDIDLAKAISEKLGKQLEVREF---AFDALILNLKKHR 69

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           ID +      T  R+  + L             +  +      +     +S+ VQ GT  
Sbjct: 70  IDAILAGMSITPSRQKEIALLPYYGDEVQELMVVSKRSLETPVLPLTQHSSVAVQTGTFQ 129

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV- 215
           E  L               F+   E+    R  +      + S    +            
Sbjct: 130 EHYLL-----SQPGICVRSFDSTLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRL 184

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            LP           + +   E    +     
Sbjct: 185 ELPPECWVLGCGLGVAKDRPEEIQTIQQAIT 215


>gi|304440010|ref|ZP_07399903.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371502|gb|EFM25115.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 556

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 90/292 (30%), Gaps = 28/292 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD------- 55
           K F   +L +++     FS   S      +   L+ G+      F   +  G        
Sbjct: 33  KRFMNVVLLIMVGIIGIFSFPMSTFA---EENTLRVGLEAAYPPFNWTQQTGQNGAVPIE 89

Query: 56  -----WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
                  G+DV   + ++  +     ++  + +       AL S +ID++      T  R
Sbjct: 90  GSNEFANGYDVQMAKKIAEGLGK---RLVLVKIEWDGLVPALTSGRIDLIMAGMSPTAER 146

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC--VQAGTTTELTLADYFKAHN 168
                + F    Y      +++ K   ++ S+L   +    V    T   T+ D     N
Sbjct: 147 AK--QIDFSDAYYESDLVMVVNAKGKYANASKLDDFTGAGIVAQLNTFHDTVIDQIPGVN 204

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT---NDRPSEHVILPDIISKSP 225
                        +  A +  + D Y  +     A +           +       + + 
Sbjct: 205 H---LEPMSDFSIMRVAVQTGKADGYVAERPEAMAAETAGVGIKMVDLNPGFDTDKADTS 261

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           +A  I +G+     +               + + NI Q  ++     ++RFL
Sbjct: 262 IAIGIKKGNPIRERLNQILSDVSKEDRLELMDEMNILQNKEENEGEGLERFL 313


>gi|87300829|ref|ZP_01083671.1| possible ABC transporter, solute binding protein [Synechococcus sp.
           WH 5701]
 gi|87284700|gb|EAQ76652.1| possible ABC transporter, solute binding protein [Synechococcus sp.
           WH 5701]
          Length = 309

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 11/233 (4%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FD 73
             + +    ++  + + G L    +        +   G   G+ ++    +++ +     
Sbjct: 18  SAAAARAEGVVDRVARSGELVLVGHPDQAPMLSLDVQGRPVGYAMEVANRIAAELALAAG 77

Query: 74  DPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
            P ++++ P+ +  +    L   Q D+      +T  R+  + L +       G   +  
Sbjct: 78  RPVRLRFEPVADPADLGQRLVGGQADLAC-GVPFTWERD--ITLDYSLPFGLSGLRLLAP 134

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
             +   S   L+G  I V A +  E  L            P+ F  + +  AA +    D
Sbjct: 135 AGRLDGSPQSLAGRRIGVVANSLGETELKGIQPKA----QPVGFADLSQAVAALQGGSVD 190

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              GD + L  L       +      +   +  +A  + + D+ + N+V+   
Sbjct: 191 GVIGDSTLLAGLVAGGKGAALAQTPSEPYERYAVACLVHENDSAFRNLVNLAI 243


>gi|310815247|ref|YP_003963211.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Ketogulonicigenium vulgare Y25]
 gi|308753982|gb|ADO41911.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Ketogulonicigenium vulgare Y25]
          Length = 243

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 57/197 (28%), Gaps = 25/197 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +  + L  +          DI     ++ G       +  V       G++
Sbjct: 1   MKTLLRSTAILSLGLLASGAMA-----QDI-----VRIGTEGAYAPYNFVNDQNQLDGYE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    L           +++  +       L S   D +      T  R     +AF  
Sbjct: 51  IELGNELCLRAG---ITCEWVQNDWDSIIPNLVSGNYDAIMAGMSITDER--RQVIAFSD 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                     + + +G+     ++ A +  Q GT     +++           + F   +
Sbjct: 106 EYVPAQSSLYVAQTEGV----DVNTAVVAAQTGTIQAGHVSETAA------TLLEFATFD 155

Query: 181 EIDAAYRAHRCDAYTGD 197
           +  AA  +   DA   D
Sbjct: 156 DALAAVTSGEADAVLAD 172


>gi|260583730|ref|ZP_05851478.1| polar amino acid uptake (PAAT) family ABC transporter polar amino
           acid-binding protein [Granulicatella elegans ATCC
           700633]
 gi|260158356|gb|EEW93424.1| polar amino acid uptake (PAAT) family ABC transporter polar amino
           acid-binding protein [Granulicatella elegans ATCC
           700633]
          Length = 291

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/245 (12%), Positives = 64/245 (26%), Gaps = 25/245 (10%)

Query: 1   MYKDFFVSILCLIILFFTS------------FSTNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F +  +   +                  S        I+K G +K      L   +
Sbjct: 1   MNKWFKLGAVAATLFLGACSTSTSTTTSKDTVSQAQKNWDAIEKAGKIKVATAGTLYPQS 60

Query: 49  E-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                +    G+DV+  + ++  +     ++ +  +       AL S Q+D    N    
Sbjct: 61  FHTDKDNSLTGYDVEIVKEVAKRL---NLEVDFTEMGVDGMLTALDSGQVD--IANYSIE 115

Query: 108 LLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
              +            +     ++      GI S + + G      A T          K
Sbjct: 116 EGSKYVDKYLRTEPHKYSFTSMVVRESDNSGIYSWADVKGKKAAGAASTNYMKI----AK 171

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
               +         +   +     R D    D              +  + + + I  +P
Sbjct: 172 KLGAELVIYDNVTNDVYMSDLVNGRTDVIINDYYLQKIAVAFGKD-TFPIKINEGIYANP 230

Query: 226 LAPAI 230
            + + 
Sbjct: 231 YSASF 235


>gi|271500413|ref|YP_003333438.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270343968|gb|ACZ76733.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 276

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 15/218 (6%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           +    IK+ G L+ G+  G   + +  A G+W G      + L+  +      ++     
Sbjct: 28  ATWQHIKQTGELRIGVAQGEPWYFKNAATGEWDGIGYQVGKVLAKDLGVKLVAVE---TT 84

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQL 143
                 ALQ+ QID +    D T  R+    + F     ++  QG ++     ++  S L
Sbjct: 85  WGNAVAALQTGQIDTML-VLDPTDERKK--AVDFPEQPFFWYAQGVLVRDGISVTDWSDL 141

Query: 144 --SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
                 I V  G++ +L L             + F  ++E  AA+ A R DA +    AL
Sbjct: 142 NRPDIKIGVTLGSSPDLLLTKNLPKA----QLVRFPNMDEGVAAFYAGRVDALSYFHPAL 197

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
              +    + +  +ILP  I     + AI +     ++
Sbjct: 198 ALQQAKVGKGN--LILPKPIVAVSTSGAIRKESDPTFH 233


>gi|139439310|ref|ZP_01772752.1| Hypothetical protein COLAER_01768 [Collinsella aerofaciens ATCC
           25986]
 gi|133775334|gb|EBA39154.1| Hypothetical protein COLAER_01768 [Collinsella aerofaciens ATCC
           25986]
          Length = 308

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 27/267 (10%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV------------KANGDWK-GFDVDFC 64
           T+      +   +  +  ++ G+      +                  G +  G+DV   
Sbjct: 51  TTGGGRDDLSDSVIGKDKIRIGMEAAYAPYNWQVSEASEYTIPIDNVQGAYADGYDVQIA 110

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + +  A+  +P  ++    +      +L + QID++      T  RE S+G  F    + 
Sbjct: 111 KIVCKALGGEPVAVK---QSFSGLIDSLNNGQIDLIIAGMSATPEREESVG--FSDPYFI 165

Query: 125 DGQGFIMHKKKGISSVS---QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              G  + +     + +     SGA++  Q  T  +  + +     +        + V  
Sbjct: 166 GYFGLFVKEGSPYQNATKLSDFSGATVLGQKDTMLDTVIDEIPGVVHKN----PVDSVPT 221

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLA-PAIIQGDTEWYN 239
           + +      CDA T +          N      H    +   +   A     +G  +   
Sbjct: 222 VFSNLLQGTCDAVTYNTENEKGYMAQNPGIVPIHFAEGEGFKQEVAANVGCRKGSDKLLK 281

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK 266
           ++  T   +   E   +    +++   
Sbjct: 282 LIDKTLKGISQEERDQMWDACLDRQPA 308


>gi|262043354|ref|ZP_06016482.1| histidine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259039306|gb|EEW40449.1| histidine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 213

 Score = 84.4 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 69/195 (35%), Gaps = 13/195 (6%)

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D  + L   I    ++  ++         +L++K+ID +  +   T  R     
Sbjct: 1   MVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQE 55

Query: 116 LAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           +AF    Y      ++ K   +   ++ L G  + V  GTT E    +++    +    +
Sbjct: 56  IAFTDKLYAADSRLVVKKGSPVTPDLATLKGKRVGVLQGTTQETYGNEHWAPKGI--EIV 113

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APA 229
            ++  + I +   A R DA   D  A     L      ++      I    L        
Sbjct: 114 SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKDYQFGGPSIKDEKLFGVGTGMG 173

Query: 230 IIQGDTEWYNIVSWT 244
           + + D E    ++  
Sbjct: 174 LRKEDNELREALNKA 188


>gi|154486274|ref|ZP_02027681.1| hypothetical protein BIFADO_00078 [Bifidobacterium adolescentis
           L2-32]
 gi|154084137|gb|EDN83182.1| hypothetical protein BIFADO_00078 [Bifidobacterium adolescentis
           L2-32]
          Length = 294

 Score = 84.4 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 78/243 (32%), Gaps = 10/243 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G+     G   +   G++ GFD+D  + ++  +     +I +  L+   R  AL  
Sbjct: 40  TIAIGVAADQPGLGYLHG-GEYSGFDIDVAKYVAKTLGYAEKQIVFKQLSPAMRASALTD 98

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQA 152
             +D++  +       +               +  ++       I+    LS  ++C  A
Sbjct: 99  GTVDMVVDSFSMDGTHDG--EADVAGPYLTVREALLIRSDSASEITGTDSLSDKTVCAVA 156

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  +  +    +  N++      +   +   A      DA   D +    L   N    
Sbjct: 157 GSAADDNIR--NRTKNIRTTVAERDTYPQCMTALMIGEADAVAADDAIAAGLASNNTGDH 214

Query: 213 EHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
             ++ +PD         A+  G  E    +     AMV          ++ +    T + 
Sbjct: 215 LKIVDVPDTTWS--YGIAVKSGQDELVGQIDAALRAMVKDGSWQKAAADMGKSIGYTPDA 272

Query: 272 DVQ 274
            + 
Sbjct: 273 SMN 275


>gi|254451144|ref|ZP_05064581.1| ABC transporter, substrate binding protein [Octadecabacter
           antarcticus 238]
 gi|198265550|gb|EDY89820.1| ABC transporter, substrate binding protein [Octadecabacter
           antarcticus 238]
          Length = 239

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 11/183 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +RG +  GI      F  + + G   G+D       +  +  +   ++ + +  + R  A
Sbjct: 2   ERGTVVIGIQGDNPPFGFLDSTGQNDGYDAALANLFADHLGVE---LELVIVTNQNRIAA 58

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ+ ++D L      +  R     L +      D    I      ++ ++ ++  +I V 
Sbjct: 59  LQTGKVDALFATLGISAERAE--ALQYSYPYAEDSMPLIAAADLDVADIAAMNSLTIGVP 116

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G++ E  + +           + F+       A  + + DA   +       ++  + P
Sbjct: 117 KGSSQENLIPELAP----NATMLSFDDDSANIQALLSGQVDAIAAN--QFAIGRIEENAP 170

Query: 212 SEH 214
            E+
Sbjct: 171 GEY 173


>gi|310814770|ref|YP_003962734.1| extracellular solute-binding protein family 3 [Ketogulonicigenium
           vulgare Y25]
 gi|308753505|gb|ADO41434.1| extracellular solute-binding protein family 3 [Ketogulonicigenium
           vulgare Y25]
          Length = 261

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 78/260 (30%), Gaps = 22/260 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F S+     L   + +  A  L D++ R  +             V  +G   G++
Sbjct: 1   MMKALFTSL----GLALIATAGAAQTLPDLQGR-EITVATENAYPPLQFVGPDGAAIGWE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +      + Y  ++      A+   Q D     T  T+  +    + F  
Sbjct: 56  YDAMDEIAKRL---NLTVTYGNISWDAMIPAVSEGQFD--IGMTGITIREDRMEMVDFSD 110

Query: 121 ITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIV 175
                    I+     +    +S +      +  Q GTT   + + D           + 
Sbjct: 111 PYLTSQMLMIVRGDEDRFVDAASFAANPDLLMSAQPGTTPFYVGVYDVLDGDEANPRIVK 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE      AA R    D    D +A +    T+D      I+ + +          +G  
Sbjct: 171 FETFGAGLAALRTGDVDLALSDSTAAHGYVNTSD--GALKIIGEPLGTEDFGFIFPKGSD 228

Query: 236 EWYNIVSWTHYAMVTAEELG 255
                +     A + + E  
Sbjct: 229 -----LVTAINAAIASMEAD 243


>gi|262166784|ref|ZP_06034521.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           mimicus VM223]
 gi|262026500|gb|EEY45168.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           mimicus VM223]
          Length = 248

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 78/218 (35%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF++D    +      +  K++++  N    
Sbjct: 18  TVQAATDVKVGMSGRYFPFTFVKKD-ELQGFEIDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDSIKGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  +    + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSH--DKDGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P +    P    ++       +   +    V+   
Sbjct: 188 TGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKAL 225


>gi|322418773|ref|YP_004197996.1| histidine kinase [Geobacter sp. M18]
 gi|320125160|gb|ADW12720.1| histidine kinase [Geobacter sp. M18]
          Length = 572

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 76/250 (30%), Gaps = 20/250 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +SI  L  +     + +   L        +  G +     +  +  +    G++V+  RA
Sbjct: 6   LSICALTGVQAAHAADHGQSL--------VVVGGDRSYPPYEFLDKDDKPSGYNVELTRA 57

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +     ++        +R   L +  IDIL     ++ +R  +  + F P      
Sbjct: 58  VARVMG---LQVDIRLGAWSQRRQDLLNGDIDIL-EGMSYSDVRAKT--VDFSPPHTIVH 111

Query: 127 QGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                 K       ++ L G  + V      +  + ++  A+      +      ++  +
Sbjct: 112 HSIFARKGGDKRPILADLRGKEVLVL----NDGIMQEFLAANKTGALVVPVPTHADVLRS 167

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + + D           L       S    + D +S      A+ +G+       +   
Sbjct: 168 LASGKHDYAVMAKLPGLYLIRELG-LSNLEAVGDPVSAQQYCFAVKKGNAALLARFNEGL 226

Query: 246 YAMVTAEELG 255
             +    E  
Sbjct: 227 AILKNTGEYQ 236


>gi|293376246|ref|ZP_06622489.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
 gi|325845159|ref|ZP_08168468.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter
           sp. HGF1]
 gi|292645138|gb|EFF63205.1| bacterial extracellular solute-binding protein, family 3
           [Turicibacter sanguinis PC909]
 gi|325488824|gb|EGC91224.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter
           sp. HGF1]
          Length = 270

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 83/263 (31%), Gaps = 34/263 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K       C+++   +  +T+ S       +     G+      F             
Sbjct: 1   MRKLVVTLAGCILLAGCSGNATSNS-------KDTFTVGMECNYAPFNWQTSAPTQTSVS 53

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           +   G   G+DV     ++ ++     ++    L      L+L+S +ID +         
Sbjct: 54  IGGAGFCDGYDVRIANEIAKSM---EKELVIKKLEWDGLQLSLESGEIDAIIAGMTANEE 110

Query: 110 REISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTLADYFKA 166
           RE   G+ F    +      I+         +S+   SG ++  Q  T  +  +      
Sbjct: 111 RE--QGIDFTTPYFESEMVLIVRADDDLVHATSIQDFSGKNVIGQMNTNYDTVIDQIEGV 168

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIIS 222
           +++           E+  + +++  DA T ++     +   N   +          DI +
Sbjct: 169 NHLTPK----SSYPELVVSLQSNEADAITAELPVAEGVIQANPDLTIVHFAEGKGFDIDT 224

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
              +        TE++N V    
Sbjct: 225 SVSIGLKEGSRGTEFFNQVQSAL 247


>gi|107026289|ref|YP_623800.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|105895663|gb|ABF78827.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 317

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L  GI   L   +          GFD D  + +S ++      I     +      AL
Sbjct: 68  GTLTIGIAPSLPPISSYATDARTVIGFDADVGQLVSDSLGRKLKIIALAWADWPL---AL 124

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASIC 149
           +S ++D +  N   T  R+      F      D  GF +    K + I     ++G  I 
Sbjct: 125 ESGKVDAVISNVTVTEERK--QKFDFS-TYRKDQVGFYVRNDSKIQAIREPKDVAGLRIV 181

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AG   E  L  + + +            ++       A ++ R DA     S L    
Sbjct: 182 TDAGANQEKILLAWDRENVAHGLKPVQIQYYDDQAMRIVAVQSGRADAVFSVNSVLAYQS 241

Query: 206 LTNDR 210
               +
Sbjct: 242 AQQGK 246


>gi|288965414|pdb|3G41|A Chain A, The Structure Of Cpn0482, The Arginine Binding Protein
           From The Periplasm Of Chlamydia Pneumoniae
          Length = 246

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 9/211 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             G N     F  V A G+  GFD+D  +A+S  +       ++         L L+  +
Sbjct: 13  IVGTNATYPPFEYVDAQGEVVGFDIDLAKAISEKLGKQLEVREF---AFDALILNLKKHR 69

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           ID +      T  R+  + L             +  +      +     +S+ VQ GT  
Sbjct: 70  IDAILAGMSITPSRQKEIALLPYYGDEVQELMVVSKRSLETPVLPLTQYSSVAVQTGTYQ 129

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV- 215
           E  L               F+   E+    R  +      + S    +            
Sbjct: 130 EHYLL-----SQPGICVRSFDSTLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRL 184

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            LP           + +   E    +     
Sbjct: 185 ELPPECWVLGCGLGVAKDRPEEIQTIQQAIT 215


>gi|227509547|ref|ZP_03939596.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190909|gb|EEI70976.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 281

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 12/215 (5%)

Query: 36  LKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L C  +  L   +     G    GFDV+  RA++  +      +++  +N   +  A+++
Sbjct: 38  LICATSGTLYPSSFHNEKGNKLTGFDVEIVRAVAKKMGRK---VEFKEMNVDGQLTAVKT 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + DI + +   +  RE    L+      F+           I S + + G     +AGT
Sbjct: 95  GKADIAANDFSVSPAREKQFALSTPYKHSFNSLIVRQKDDSSIHSWADIKGKRAAGEAGT 154

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-- 212
           +    LA    A  + Y  +     +      +  + D    D                 
Sbjct: 155 SY-QRLAKQLGAKPVNYDNV---SNDIYMKDVKNGKTDLIMNDYYLQKLALAAVPNNGLK 210

Query: 213 --EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              ++              + +G+T+    ++   
Sbjct: 211 ILSNMYFKTNEDGKGTGIIMKKGNTKLQKQINKAL 245


>gi|148263380|ref|YP_001230086.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter uraniireducens Rf4]
 gi|146396880|gb|ABQ25513.1| amino acid-binding domain sensor histidine kinase [Geobacter
           uraniireducens Rf4]
          Length = 584

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 17/204 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F  ++    +LF T+  T A           ++ G N     +  V  NG   GF VD 
Sbjct: 13  RFPATLTLFFLLFATAPFTEAFAGEK-----TIRVGGNHDYPPYELVDKNGQPAGFTVDL 67

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA++  +      +        +R   L++  ID+           E      F     
Sbjct: 68  LRAIAEVMG---MNVDIHLGEWAKRHDDLKNGMIDM---TLGMNNSEERDKIFDFTSPHT 121

Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              Q     +    +SS+ QL G  + +         + +  +    +   +  +     
Sbjct: 122 IVQQAIFARRDSPVVSSLEQLRGKKVILHRN----GIMHERLRQLGFEKDLMYADTPAGS 177

Query: 183 DAAYRAHRCD-AYTGDISALYALK 205
                + + D A    +  +Y ++
Sbjct: 178 LRLLASGQGDYAVVALLPGMYIIR 201


>gi|307693269|ref|ZP_07635506.1| extracellular solute-binding protein [Ruminococcaceae bacterium
           D16]
          Length = 293

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 72/224 (32%), Gaps = 9/224 (4%)

Query: 35  FLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            L  G +     F             G DV   + ++  +  +   ++   ++       
Sbjct: 54  KLVLGTSADYPPFEFHVLQDGEDKIVGIDVFLAQQIAEDMGAE---LEISDMDFDMLLNL 110

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150
           +    +D++    +    R  +   +    T       +         ++   SG ++  
Sbjct: 111 MNKGDVDMVIAAMELKDDRAAAADYSDPYYTDEAPLIVVRKADLDQYKTLEDFSGKTVGA 170

Query: 151 QAGTTTELTL--ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           Q GTT    +   D  K H      ++  +V ++ A  +  +CDA   D +       +N
Sbjct: 171 QTGTTKADIVLGTDPEKPHMTDVQDLLLPKVTDLIAQLQFEKCDAVVLDAAVAQKYVASN 230

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           D  +    +    +  P    + +GD +          A VTAE
Sbjct: 231 DELAIVESIDLGEAAEPYRVWVAKGDPKGLLPSINETIAKVTAE 274


>gi|325062127|gb|ADY65817.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 283

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 93/263 (35%), Gaps = 18/263 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   ++ L  + L  +  + +A  L ++KK+G+++       V ++ ++ +G   G  
Sbjct: 3   MTK---LAGLSALALSISVTAVSALTLEEVKKQGYIRAAT-ANEVPYSYMQPDGTSAGIG 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D   A+  ++  +   + +           L++++ D  +      +  E    +AF  
Sbjct: 59  PDVANAVLKSMGIEE--VNWTVTPFGTLIPGLKARRFDFAAAE--QNISPERCKQVAFTE 114

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFE 177
                G+G ++ K     +++ + ++       A  +    + D+ +A  +K    +   
Sbjct: 115 PNSSYGEGLLVKKGNPKKLTTYADIAKDPALKVAVVSGANNV-DFLRAVGVKEDQIVFIP 173

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-----PSEHVILPDIISKSPLAPAIIQ 232
              +     ++ R DAY      +  L           P    ++ D   ++    A   
Sbjct: 174 ANADAIPTVQS-RADAYAATELTVSELAKGQANVEQVKPFVDPVVKDAPVRNYGGFAFRP 232

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
            D E  +  +         ++  
Sbjct: 233 EDKELRDAFNAALVEFRKTDDYK 255


>gi|221210009|ref|ZP_03582990.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD1]
 gi|221170697|gb|EEE03163.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia multivorans CGD1]
          Length = 313

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 14/184 (7%)

Query: 35  FLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  GI   L   +          GFD D  + ++  +     +++ + L   +  LAL 
Sbjct: 65  TLTIGIAPSLPPISTYATDARTVVGFDADVGQLVADTLG---RRLKIVALAWADWPLALD 121

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICV 150
           S ++D +  N   T  R+      F      D  GF +     I +      ++G  I  
Sbjct: 122 SGKVDAVISNVTVTEERK--QKFDFS-TYRKDQLGFYVRNDSAIRAIREPKDVAGLRIVT 178

Query: 151 QAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            AGT  E  L  + + +            ++       A ++ R DA     S L     
Sbjct: 179 DAGTNQEKILLAWDRDNVAHGLKPVQVQYYDDHAMRIVAVQSGRADAIFSVNSVLAYQSA 238

Query: 207 TNDR 210
              +
Sbjct: 239 QQGK 242


>gi|170722161|ref|YP_001749849.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169760164|gb|ACA73480.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 313

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 90/271 (33%), Gaps = 29/271 (10%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +  +    L L + F    S  A+   L  ++    L  G    L  F+   +    +
Sbjct: 2   MRRSKWVALCLALSVPFAAVCSVEAATDKLSRLRDSQVLNLGFIADLAPFSS-GSIQSPQ 60

Query: 58  GFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ ++ C+A++  +   P     ++ +  +  ++   AL    +D+L      T+ R   
Sbjct: 61  GYGIELCQAVAQHLRQSPGLADLQVHWHVVPQEQAVRALSEGTVDLLCTPMVETITR--R 118

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-------------------ASICVQAGT 154
             L F    +  G   ++ +    S +  L G                    S  V  GT
Sbjct: 119 ETLNFSIPVFTTGLAVLVRRDAPASLLEPLRGKPVDTGPRWRATLNAGLSKHSFAVLRGT 178

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +     +  +   ++         +E        + DA+ G+   L +L+         
Sbjct: 179 LSSQWARERIRKLGLQSRLEEVSSYQEGVRRVVERKVDAFFGERMILLSLQSQQPERDRL 238

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            I   +   S +A  + +GD  +  +V    
Sbjct: 239 WIPDHLFVTSRVALPMARGDDGFRLLVDAAL 269


>gi|218780361|ref|YP_002431679.1| multi-sensor hybrid histidine kinase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761745|gb|ACL04211.1| multi-sensor hybrid histidine kinase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1357

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 60/192 (31%), Gaps = 16/192 (8%)

Query: 7   VSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           ++I+CL I+           +  G+   +  L          F+ +  NG   GF V+  
Sbjct: 21  LTIICLTIILLGGNYALAKENTFGN---KQVLSSAAEIDYPPFSAIDKNGQAIGFSVELM 77

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA   ++  +   + +      +    L+  ++  L      T  RE      F      
Sbjct: 78  RAALKSMGRE---VTFRTGPWPQVKGWLEQGEVQAL-PLVGRTPEREA--AFDFTFPYMS 131

Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                ++ K +  I  +  L G  + V           ++ +  +        +  E+  
Sbjct: 132 IHGAIVVRKGEAGIRDLKDLKGREVAVMKS----DNAEEFLRREDCGAIIHTTDTFEQAL 187

Query: 184 AAYRAHRCDAYT 195
           +     R DA  
Sbjct: 188 SELSQGRHDAVV 199



 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 67/222 (30%), Gaps = 13/222 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     +  +  N   +G +VD  RA++  +      I        +    L++ 
Sbjct: 278 IIIGGDYNYPPYEFLNENNLPEGMNVDLTRAIAREMG---LNIDIRLGPWSKAVEDLENG 334

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG 153
            ID L          E  L   F P    +    I  K       S+ +L+G SI VQ G
Sbjct: 335 AIDALEGMF---YSPERDLKFDFTPPHTLNHYVSITRKGEGPPPLSMEELTGKSIVVQKG 391

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 + +Y   H +K +  + +  E++         D           L   N   + 
Sbjct: 392 ----DMIYNYAVKHGLKDNISLKDTQEDVLRGVSNGMYDCALSARVTTLYLINKN-NWTN 446

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +    I  +    A+  G        S     +    E  
Sbjct: 447 LELGRQPILTTEYCYAVPNGHKALLAQFSEGLKIIEETGEYR 488


>gi|295697139|ref|YP_003590377.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
 gi|295412741|gb|ADG07233.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM
           2912]
          Length = 280

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 21/219 (9%)

Query: 6   FVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
             ++L L     +S    +     L  +K    L   +             N +W G D+
Sbjct: 4   IAALLSLTACGASSSPQGSGTGDLLDKVKSSKVLSVAV-ASFPPLEYQDPANQEWSGVDI 62

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D     +S +    +K++   +       ++ SK+ D ++ N   T  RE    LAF   
Sbjct: 63  DILSKFASTLG---AKLEVHSMAFPATIQSVASKRDD-ITANIFKTPERE--NVLAFSNP 116

Query: 122 TYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                +G I++        ++V  L G  I    GT  +  +     A N  Y+ +    
Sbjct: 117 VIKYVEGIIVNSDFPRIPAATVEGLQGKKIATATGTAEQAFVPRIPGAVNQSYNSV---- 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             E   A  + R DA       +YA       PS H+ +
Sbjct: 173 -NEAFLARSSGRVDA--TFQPVMYAEWAVQKNPSLHIKV 208


>gi|50086445|ref|YP_047955.1| arginine/ornithine ABC transporter periplasmic substrate-binding
           protein [Acinetobacter sp. ADP1]
 gi|49532421|emb|CAG70133.1| putative arginine/ornithine binding protein (ABC superfamily,
           peri_bind)(artI, aotJ) [Acinetobacter sp. ADP1]
          Length = 291

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 75/284 (26%), Gaps = 23/284 (8%)

Query: 3   KDFFVSILCLIILFFTSFS-------TNASILGDIKKRGF-LKCGINTGLVGFAEVKANG 54
           K   +    +  L   S S       +        +  G     G +     F  +  N 
Sbjct: 12  KRLIIGACVISSLVACSQSENHKDMTSKGDT--SPQASGTTYHIGSDITFPPFEYM-END 68

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D    +         +I+++          L++K+ D++      T  R    
Sbjct: 69  QPAGFDIDIAHKIFEKTG---DQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPER--MK 123

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLAD-----YFKAHN 168
            +   P          +        V   L G +I  Q G+     L             
Sbjct: 124 KVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGK 183

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  FE   +   A  A   DA+  D+S   +                         
Sbjct: 184 PPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLG-GI 242

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
           A+ +GDT  YN +      M  + E     +  N       + +
Sbjct: 243 AVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIE 286


>gi|260771046|ref|ZP_05879974.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           furnissii CIP 102972]
 gi|260613935|gb|EEX39126.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           furnissii CIP 102972]
 gi|315178627|gb|ADT85541.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio furnissii NCTC 11218]
          Length = 248

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 82/221 (37%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +   ++Y+  N    
Sbjct: 18  TVQAATDIKVGMSGRYFPFTFVKQD-QLQGFEVDVWNEIGKR---NDYHVEYVTSNFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTKERQA--KYLFSAPYVIDGAQIAVRKGNDSIQGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  + K  + K +   ++   E D A    R DA+  D  ++  +   
Sbjct: 132 VAVNLGSNFEQLLRAHDK--DGKINIKTYDTGFERDVAL--GRIDAFVMDRLSVLEVIDK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P     +       +   +  + V+    AM
Sbjct: 188 TGLPLQLAGSPFETIANAWPFLNNEKGHKLQSEVNQALAAM 228


>gi|91780438|ref|YP_555645.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693098|gb|ABE36295.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 313

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 77/245 (31%), Gaps = 44/245 (17%)

Query: 1   MY--KDFFVSI---LCLIILFFTSFSTNASIL----------------GDIKK------- 32
           M   ++   ++   L  + +     +  A+                    IK        
Sbjct: 1   MKHSRNILSAVAGTLAALAMGIVGTALAATTFNLSPDQHDRVRTTPDAAAIKAVPPSFPF 60

Query: 33  --RGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
             +  L  G+  G    A          GFD D  + ++  +      ++ + L  ++  
Sbjct: 61  VGKDELVIGMTVGAPPLAAYATDEKTVVGFDPDLAQLVADGLGRK---LKIVVLAWEDWP 117

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGA 146
           LALQS ++D +  N   T  R+      F      D  GF +        I     ++G 
Sbjct: 118 LALQSGRVDAILSNVTVTEERKE--KFDFS-TYRRDVLGFYVANSSPIKAIREPKDVAGL 174

Query: 147 SICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            +   +GT  E  L ++ K +            ++ +   D A R+ R DA     S L 
Sbjct: 175 RVITDSGTNQEKILLEWNKENVARGLKSVQVQYYDDLAVRDVALRSGRADAILSVNSFLA 234

Query: 203 ALKLT 207
                
Sbjct: 235 YEAAQ 239


>gi|300718489|ref|YP_003743292.1| Amino acid ABC transporter, periplasmic binding protein [Erwinia
           billingiae Eb661]
 gi|299064325|emb|CAX61445.1| Amino acid ABC transporter, periplasmic binding protein [Erwinia
           billingiae Eb661]
          Length = 298

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 78/273 (28%), Gaps = 33/273 (12%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLVG 46
           K  F +++   +    +   N                     +I KRG++  G N     
Sbjct: 5   KWVFSALMVASLPTAWAAEQNVPTESSLHVSADSKLKSQLPAEILKRGYIVAGTNPNTPP 64

Query: 47  FAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNT 104
               K +     G ++D   A+   +      + +            L+S + D+   N 
Sbjct: 65  TTFYKEDNRTLVGREIDIMNAVGERLG---IPVHWQDTGGFDNIIPGLKSGRYDVALSNI 121

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS---SVSQLSGASICVQAGTTTELTL- 160
           + T  R     + F         G I  K+  +    S+  + G ++   AGTT    L 
Sbjct: 122 NATKARLA--QVDFVGYYNASRLGIIAQKEANVKPFTSLLDVCGKTVGAGAGTTQLTRLD 179

Query: 161 ---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
                   A        VF        A  + R   + G    L         P   +  
Sbjct: 180 QASKACEAAGKQPIKTAVFPDRPAGVQAVVSGRVPMFFGPYEGLTYQVSQV--PVLALPG 237

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              +  +P++ A  +        V     +++ 
Sbjct: 238 QIHVDDAPVSVAFAKDSP-LEPAVQAALNSLIE 269


>gi|127513506|ref|YP_001094703.1| extracellular solute-binding protein [Shewanella loihica PV-4]
 gi|126638801|gb|ABO24444.1| extracellular solute-binding protein, family 3 [Shewanella loihica
           PV-4]
          Length = 267

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           +CG+ TG   +    A G+  GFD D  R +   +       Q+        F  L+   
Sbjct: 31  RCGVATGFPPYQFS-AGGETTGFDADVARLIFKRLG---MPFQFRQQAWDLVFNELRFGD 86

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTT 155
           I+ L    +   LR       F    Y+     FI+   + I+ +  L    +     + 
Sbjct: 87  IE-LIAGMEINALRTKF--FDFTRPYYYRYDVIFILEDNQQITKLEDLHNQFVSGDRHS- 142

Query: 156 TELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
               +  ++K       +  I     E      +  +  A     +    L L      E
Sbjct: 143 ---YIETHWKELGTLYDFRIIATPSKERSMQLLKEGKIQAAIMPKA--VGLYLAQQMGIE 197

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
             IL +    SP+A A+ +G+ +    +     A+++  E
Sbjct: 198 VKILDNPDPGSPVAFAVKRGNHQLLVQIDEALEALISEGE 237


>gi|110679187|ref|YP_682194.1| periplasmic binding protein, putative [Roseobacter denitrificans
           OCh 114]
 gi|109455303|gb|ABG31508.1| periplasmic binding protein, putative [Roseobacter denitrificans
           OCh 114]
          Length = 242

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 66/222 (29%), Gaps = 17/222 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G       +  +   G+  GF+ +    L +         +++          L 
Sbjct: 25  KTVRLGTEGAYPPYNFLNDAGEVDGFERELGDELCARA---ELTCEWVTNEWDSIIPNLV 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S   D++      T  R+    + F            +     +     L    I  QA 
Sbjct: 82  SGNYDVIIAGMSVTDERDEV--IDFSEQYTLPDPSAYLATSADV----DLENGVIAAQAN 135

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T     +A      +     + F   EE  +A +    DA   D + L  L   N  P  
Sbjct: 136 TIQASFIA------SSGAVLVEFATPEETVSAVKNGEADAVLADKAFLAELA--NADPEL 187

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            ++  +++    +   + + DTE     +    +M     L 
Sbjct: 188 MLLEQNVMIGGGIGLGLRESDTELKEKFNVAIRSMKEDGSLN 229


>gi|322516149|ref|ZP_08069083.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
 gi|322125394|gb|EFX96746.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus vestibularis ATCC 49124]
          Length = 284

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    + IL L +L   +    +     +  ++  +    ++    F   K + D+KG
Sbjct: 9   MKKWLAGIGILGLSVLTLAACGNKSDS--KVSGEKQTITVATDSDTAPFTFKKGD-DFKG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  +A+      D  +++++          + S +  I + + ++   R  +   +F
Sbjct: 66  YDIDLVKAVFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEER--AQKYSF 121

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                         +    +S+  LSG +  V  G+     L ++  A+  K   
Sbjct: 122 SDPISRSNYAITSVEGTKYTSLDDLSGKTTEVLPGSNYAQLLENWNHANADKTPI 176


>gi|254473621|ref|ZP_05087017.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
 gi|211957333|gb|EEA92537.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp.
           JE062]
          Length = 266

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 67/241 (27%), Gaps = 14/241 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K F ++I  L +      + +A+ L D+K R  +                  G+  G+
Sbjct: 1   MMKKFKLAIATLALSVGFGAAASAADLPDLKGRTVVAV-TENAYTPLNFADPKTGEGIGW 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D    ++  +     K+ +   +      A++  Q D+          RE    + F 
Sbjct: 60  EYDAFNEIAKRL---NMKVDWRLASWDSMIEAVRQGQFDVGMDGITINEEREK--QIDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTT-ELTLADYFKAHNMKYHPI 174
                     ++   +             G  +  Q GTT     +              
Sbjct: 115 DPYMTSEMFMLVRADEDRFDNPKAFADDPGLLVGAQPGTTNFYTAVYSVLDGDENNKRIQ 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +FE       A RA   D    D +A          P    ++   I        +  G 
Sbjct: 175 LFETFGASVQALRAEDVDMVLMDATAAAGY--MGASPDSFKVVGGPIGSEDFGFILTPGS 232

Query: 235 T 235
            
Sbjct: 233 D 233


>gi|50119799|ref|YP_048966.1| ABC transporter periplasmic-binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610325|emb|CAG73769.1| ABC transporter, periplasmic binding protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 298

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 87/276 (31%), Gaps = 35/276 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN------------------ASILGDIKKRGFLKCGINT 42
           M K+ F   L ++ +   +FS +                  A +   + ++GF+  G N 
Sbjct: 1   MKKNLFAFPLLMLAVLPPAFSADQNVPTTRTFQIQPDAALKAKVPDAVLQKGFIVAGTNP 60

Query: 43  GLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDIL 100
                   + +     G ++D   A+   +      + +            L+S + D+ 
Sbjct: 61  NTPPTTFYQEDNKTLAGREIDIMNAIGDRLG---VPVNWHDTGGFDNIIPGLKSGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N + T  R     + F           I  K   +   +S++ L G  I   AGTT  
Sbjct: 118 LSNINATPKR--LEQIDFIGYFNASKLAIISLKDANVAPFTSLNVLCGKDIGAGAGTTQL 175

Query: 158 LTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           L L +                +F        A  + R   + G    L        R   
Sbjct: 176 LRLQEADKQCVAEQKDAIKIAIFPDRPSGVQAVISGRVPLFFGPYEGLRYQVSQVKR--L 233

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +     ++ +P++ A  + D+   + V     +++
Sbjct: 234 AISGDIAVNDAPVSIAFPK-DSALEDAVQAALNSLI 268


>gi|188533382|ref|YP_001907179.1| ABC transporter, substrate binding protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028424|emb|CAO96285.1| ABC transporter, substrate binding protein [Erwinia tasmaniensis
           Et1/99]
          Length = 313

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 78/250 (31%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++     ++  +P + ++  L 
Sbjct: 64  GKFTVAVAALNSPPLTLFSDDNKTLLGSEVDIARLVADSLG---LRLNVVPTSWEDWPLG 120

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I+       ++G  I
Sbjct: 121 VSSGKYDAAITNVTVTKARKE--KFDFA-TYRRDSLGFYVKSDSSITKISQAEDIAGLRI 177

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +  K    + P   +       A ++ R DAY G        
Sbjct: 178 IVGSGTNQEAILLAWDEQNQKKGLKPFIPNYVKDDAAQTLALQSGRADAYFGPNVIGAWK 237

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                R      +     K+      ++ D+     V+     ++   E         + 
Sbjct: 238 AALTGRTKRVGTVDGGWPKAAHIAVTLKKDSGLVTAVNAALNGVIKGGEYDKVLNRWGEG 297

Query: 265 SKDTTNPDVQ 274
            +   + ++ 
Sbjct: 298 VERLDHSEIN 307


>gi|134045113|ref|YP_001096599.1| extracellular solute-binding protein [Methanococcus maripaludis C5]
 gi|132662738|gb|ABO34384.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 252

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 13/198 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+  +++   +  S    I  + +  G L  G+   L  +   + NG+ KGF+
Sbjct: 1   MK-----SLYMVLLTLLSPLSNVVDIENEYQITGVLTVGVYPDLTPYTY-EENGELKGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++  I   P  I Y   N  E + A+++KQID    +   +   +    + +  
Sbjct: 55  IDLINEIAKRIEVTPEFILYNYTN--EPYEAVKNKQIDCAISSNFLSRNND---NIEYSR 109

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +  +  K +    +  L    I V   +  E       ++  M +  I ++  +
Sbjct: 110 TYLSTYEVLMCEKSQKFFRLEDLKDKKIGVLKNSKAEEKAKYLLRS--MNFEIITYDNPK 167

Query: 181 EIDAAYRAHRCDAYTGDI 198
           +I+    +   DA   D 
Sbjct: 168 DIENDIGSGNLDAAISDK 185


>gi|330860698|emb|CBX70991.1| glutamine-binding periplasmic protein [Yersinia enterocolitica
           W22703]
          Length = 167

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 7/147 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L    +T  V F   + +  + GFD+D   A++  +     K    P++      A
Sbjct: 23  AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKL---DLKYTLKPMDFSGIIPA 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           LQ+K +D+       T  R+    + F    Y  G   ++      I   + L+G  + V
Sbjct: 79  LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKANNNDIKGEADLAGKVLAV 136

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFE 177
           ++GT +        K        I   
Sbjct: 137 KSGTGSVDYAKANIKPKTCANSRISTM 163


>gi|323496926|ref|ZP_08101954.1| putative amino-acid ABC transporter-binding protein PatH [Vibrio
           sinaloensis DSM 21326]
 gi|323318000|gb|EGA70983.1| putative amino-acid ABC transporter-binding protein PatH [Vibrio
           sinaloensis DSM 21326]
          Length = 248

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 82/221 (37%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  K++Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-QLQGFEVDLWDEIGKR---NDYKVEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V+ LSG +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDDIKGVADLSGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L DY K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRDYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++       +   +    V+    AM
Sbjct: 188 TGLPLQLAGEPFETIQNAWPFVDNEKGKKLQAEVNQALAAM 228


>gi|33322293|gb|AAQ06869.1|AF496205_1 glutamine-binding protein precursor [Lactobacillus delbrueckii
           subsp. lactis]
          Length = 144

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 50/139 (35%), Gaps = 7/139 (5%)

Query: 12  LIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRA 66
           L  +  ++ +  +     +   +K    +  G+      F          +GF++D  R 
Sbjct: 1   LTTVSLSAXAVESDNSVRVYNHVKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARL 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+  I     K +++ + ++ +   L++  +D +      T  R+    + F    +  G
Sbjct: 61  LTKEILGKDGKAKFIEVPSQTKIPQLKNNNLDAVLATMTITDERKK--XVDFSTPYFKAG 118

Query: 127 QGFIMHKKKGISSVSQLSG 145
              +      I S+  L+ 
Sbjct: 119 TSLMTKTSSPIKSIKDLNH 137


>gi|325567258|ref|ZP_08143925.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158691|gb|EGC70837.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 529

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 85/296 (28%), Gaps = 43/296 (14%)

Query: 1   MYKD-FFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K+ +  ++  L +       +   +     +       + G+  G   F       AN
Sbjct: 1   MKKNNWIWAVFALCLTLIQLPLTVQADDQTPAE-----QFRVGMEAGYAPFNWTQTTDAN 55

Query: 54  GDW-----------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           G              G+DV   + ++  +  +   +  +         ALQ+  ID +  
Sbjct: 56  GAVPISGEEGSAFAGGYDVQIAKRIAEGLGKE---LVIVKTQWDGLPPALQAGTIDAVIA 112

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELT 159
               T  R     + F    Y      ++ K        S++ LSGA I  Q  T     
Sbjct: 113 GMSPTAER--REQIDFTDPYYESDLVVVVRKDGEFADAKSLADLSGAKITAQLNTFHYTV 170

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           +    +    +           +  A  +   D Y  +          N    + V   +
Sbjct: 171 IDQIPEVQKEQ----AMRDFSSMRVALASGIIDGYVSERPEGVTAVGANPD-LKMVEFDE 225

Query: 220 IISKS------PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                       +A  + +GD +    V+     +   E + +  + +     D +
Sbjct: 226 GAGFETNPEDVQVAVGMRKGDPD-VEKVNEILAGISEEERVSLMDQAVLDQPADAS 280


>gi|315036620|gb|EFT48552.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
          Length = 546

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 92/317 (29%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F  +    A+G           G+DV   + ++  +   
Sbjct: 42  TNASAEENGEFRVGMEAGYAPFNWLQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 102 ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 156

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     S+  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 157 GKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 212

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 213 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 271

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 272 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 313

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 314 GDMFLR--GAGLTLFIA 328


>gi|260433179|ref|ZP_05787150.1| ABC transporter, permease protein, HisMQ family [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417007|gb|EEX10266.1| ABC transporter, permease protein, HisMQ family [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 598

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 16/216 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +   G+  GF+ +    L         + +++  +       L S
Sbjct: 22  TVRMGTEGAYPPYNFINDAGEIDGFEREVGDELCKRA---QLECEWVKNDWDSIIPNLVS 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  R+    + F    Y       +     +     ++   +  Q  T
Sbjct: 79  GNYDTIIAGMSITAERDEV--IDFTQDYYPPTASAYVATSPDV----DVTSGVVAAQTAT 132

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +A+           + F   EE  AA R    DA   D   L  L   ++     
Sbjct: 133 IQAGHVAE------SGATLVEFATPEETVAAVRNGEADAVLADRDYLVPLVEESNGELVF 186

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           V  P  +    +   + + DTE          +M  
Sbjct: 187 VGDPVPLGGG-IGMGLRESDTELREKFDAAITSMKQ 221


>gi|253700190|ref|YP_003021379.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. M21]
 gi|251775040|gb|ACT17621.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. M21]
          Length = 1047

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 66/256 (25%), Gaps = 19/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L  ++  S + N            L  G       F+    +    GF 
Sbjct: 1   MLKRLILFACLLASVYTASAAGNPQ--------KTLVVGSEENFPPFSIGSTDDTAGGFA 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + ++                  E     +  ++D+L          E      F  
Sbjct: 53  VELWKEVAREAGLKY---TIKVRPWGELLQDFRDGKVDVLINIAT---SEERHRYTDFSV 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     + K    ISS + L+G SI V           +Y  +   +   ++ +  
Sbjct: 107 PHVTVNGAIFVRKGDSLISSEADLAGKSIIVFKS----DLAHEYAVSKGRQKQLVLVDDA 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E      + + DA      A           +   +             + +GD++   
Sbjct: 163 REGLRLLSSGKHDAMLLSKLAGMQTLRELGIDNVRALDIKAGYAQKFTFGVHKGDSDLLA 222

Query: 240 IVSWTHYAMVTAEELG 255
            ++          E  
Sbjct: 223 ALNEGLALAKAGGEYD 238


>gi|217033977|ref|ZP_03439400.1| hypothetical protein HP9810_883g47 [Helicobacter pylori 98-10]
 gi|216943610|gb|EEC23058.1| hypothetical protein HP9810_883g47 [Helicobacter pylori 98-10]
          Length = 110

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +L +   FF  F   +S+   +  +  +  G       F      G   G+D
Sbjct: 1   MKKVLFLFLLVIS--FFGGFLNASSLYERLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           V+  R L+  +      I++   +       L+S + D+++     T
Sbjct: 59  VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT 102


>gi|312863500|ref|ZP_07723738.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
 gi|311101036|gb|EFQ59241.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           vestibularis F0396]
          Length = 276

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    + IL L +L   +    +     +  ++  +    ++    F   K + D+KG
Sbjct: 1   MKKWLAGIGILGLSVLTLAACGNKSDS--KVSGEKQTITVATDSDTAPFTFKKGD-DFKG 57

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  +A+      D  +++++          + S +  I + + ++   R  +   +F
Sbjct: 58  YDIDLVKAVFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEER--AQKYSF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                         +    +S+  LSG +  V  G+     L ++  A+  K   
Sbjct: 114 SDPISRSNYAITSVEGTKYTSLDDLSGKTTEVLPGSNYAQLLENWNHANADKTPI 168


>gi|72160707|ref|YP_288364.1| extracellular solute-binding [Thermobifida fusca YX]
 gi|71914439|gb|AAZ54341.1| bacterial extracellular solute-binding [Thermobifida fusca YX]
          Length = 296

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 77/250 (30%), Gaps = 18/250 (7%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             +I     L   S + +   L  ++K+G+++  IN     F  +  NG+  G   +  R
Sbjct: 20  LAAIAFGPALAACSRTEDTVTLDSLRKQGYIQVAIN-NEAPFGYIDENGEVTGSSPELLR 78

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+ + +      ++   +        L++K+ D ++     T  R     +AF   TY  
Sbjct: 79  AIFAELGVPE--VRAESVAWDGLIPGLKAKRFDAVAAGMYITPER--CAEVAFAEPTYRV 134

Query: 126 GQGFIMHKKKG-----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            Q F++             ++     ++ V   +  +        A   +      +   
Sbjct: 135 LQAFLVPAGNPHGLTTFDDIAANPDVTVAVLNASVEQGYAK---GAGVPEAQIETVDNQT 191

Query: 181 EIDAAYRAHRCDAYT-GDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235
                    R DA     +S    L               ++    +      A  Q DT
Sbjct: 192 SAYELLSNGRVDAVALSTLSLNRLLNQRGGDFEVTEGFIPVVDGEEVTPAGGLAFRQSDT 251

Query: 236 EWYNIVSWTH 245
           E    V+   
Sbjct: 252 ELLAEVNRVL 261


>gi|320103283|ref|YP_004178874.1| polar amino acid ABC transporter inner membrane subunit [Isosphaera
           pallida ATCC 43644]
 gi|319750565|gb|ADV62325.1| polar amino acid ABC transporter, inner membrane subunit
           [Isosphaera pallida ATCC 43644]
          Length = 577

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 65/260 (25%), Gaps = 12/260 (4%)

Query: 3   KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFD 60
           +     ++        +           + + G L+ G +  G   F     N    GF+
Sbjct: 48  RTVLALLIAGCGTIMPAQGQPGGPAWPRVSESGVLRFGSDEEGGAPFLFRDDNEQLVGFE 107

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   A+   +       ++           L+   +D++    + T  RE         
Sbjct: 108 LDLLTAVGRELGG--ITPEFRQGGWDTLLQLLERGDVDVVVNGYEKTPSRESRYLS--TR 163

Query: 121 ITYFDGQGFIMHKKKGISSVSQL-----SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             Y      +  K   + S + L      G    V     +         +       + 
Sbjct: 164 PYYVYQLQLLALKGGIVRSWADLKFAKPDGGRWRVGVLGGSGAEQYARANSDPSLVEVVY 223

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE       A    + D  T    A     L      +                +   D 
Sbjct: 224 FEGTTNALMATVNGQVDC-TLQDLAPSRFYLGRPEYQKLAAAGPPEGCGYYVMYVRADDI 282

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E  + +      ++ + EL 
Sbjct: 283 ELRDRLDQAIGKLIASGELR 302


>gi|254427809|ref|ZP_05041516.1| Bacterial extracellular solute-binding protein, family 3
           [Alcanivorax sp. DG881]
 gi|196193978|gb|EDX88937.1| Bacterial extracellular solute-binding protein, family 3
           [Alcanivorax sp. DG881]
          Length = 697

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 74/222 (33%), Gaps = 10/222 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +I+++G L+   +      +     G+  GFD D  +  +         +  +     
Sbjct: 270 WAEIREKGVLRVITSNN--PASYFMWRGELMGFDYDLIKDFAKQHRLRVRVV--VHDTPS 325

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145
             F AL++ + D+++ +   T  RE   G +F        +  I       + +V +L+G
Sbjct: 326 SMFAALEAGEGDVIAASMTVTAERER-AGWSFSERYLEVNEQLIGEAGDTPLETVEELAG 384

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA-YRAHRCDAYTGDISALYAL 204
            ++ V   T    TL    +A        V     E+      +   D  T   S L A+
Sbjct: 385 RTVAVNPETAYYDTLKALQEAGGSFEILEVENASTEMLIDGVASGDYD-LTMADSHLAAM 443

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           + T     +  +L        +A    +        ++    
Sbjct: 444 ESTYRD--DIAVLFQFEPAKEIAWVTREPQQALREQLNRYIK 483


>gi|328946359|gb|EGG40501.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1087]
          Length = 225

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 9/209 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  ++ S          +       +  FA  + NG+  G+D++  +A+   +     +I
Sbjct: 15  AACSHQSKPQKNSSPKTITVATAGDVPPFAY-EENGNLTGYDIEVLKAIDEKL--SDYEI 71

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +     +  F  L S      + N  +T  R  +    +      +    + +KK  ++
Sbjct: 72  HFQRTAWESIFPGLDSGHYQAAANNLSYTKER--ADKYLYSLPISKNPLVLVSNKKNPLT 129

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTG 196
           S+ Q++G +     GT+    + ++ + H      I +   +  +          D    
Sbjct: 130 SLEQIAGKTTQEDIGTSNAQFINNWNQKHTENPATIHYSGEDIGKRIFDLSNGDFDFLIF 189

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSP 225
           D  +    K+  +R  +  I+    + SP
Sbjct: 190 DKVS--VQKIIKERGLDLSIVDLPSTDSP 216


>gi|324992800|gb|EGC24720.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK405]
 gi|327460237|gb|EGF06574.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus sanguinis SK1057]
          Length = 225

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 9/209 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  ++ S          +       +  FA  + NG+  G+D++  +A+   +     +I
Sbjct: 15  AACSHQSKPQKNSSPKTITVATAGDVPPFAY-EENGNLTGYDIEVLKAIDEKL--SDYEI 71

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            +     +  F  L S      + N  +T  R  +    +      +    + +KK  ++
Sbjct: 72  HFQRTAWESIFPGLDSGHYQAAANNLSYTKER--ADKYLYSLPISKNPLVLVSNKKNPLT 129

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTG 196
           S+ Q++G +     GT+    + ++ + H      I +   +  +          D    
Sbjct: 130 SLEQIAGKTTQEDIGTSNAQFINNWNQKHTENPATIHYSGEDIGKRIFDLSNGDFDFLIF 189

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSP 225
           D  +    K+  +R  +  I+    + SP
Sbjct: 190 DKVS--VQKIIKERGLDLSIVDLPSTDSP 216


>gi|33241833|ref|NP_876774.1| arginine-binding periplasmic protein 2 precursor [Chlamydophila
           pneumoniae TW-183]
 gi|33236342|gb|AAP98431.1| arginine-binding periplasmic protein 2 precursor [Chlamydophila
           pneumoniae TW-183]
          Length = 244

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 9/211 (4%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             G N     F  V A G+  GFD+D  +A+S  +       ++         L L+  +
Sbjct: 19  IVGTNATYPPFEYVDAQGEVVGFDIDLAKAISEKLGKQLEVREF---AFDALILNLKKHR 75

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           ID +      T  R+  + L             +  +      +     +S+ VQ GT  
Sbjct: 76  IDAILAGMSITPSRQKEIALLPYYGDEVQELMVVSKRSLETPVLPLTQYSSVAVQTGTFQ 135

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV- 215
           E  L               F+   E+    R  +      + S    +            
Sbjct: 136 EHYLL-----SQPGICVRSFDSTLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRL 190

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            LP           + +   E    +     
Sbjct: 191 ELPPECWVLGCGLGVAKDRPEEIQTIQQAIT 221


>gi|254237209|ref|ZP_04930532.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126169140|gb|EAZ54651.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 1245

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 85/264 (32%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V +LCL   +            +   + +   ++ G++T    F      G ++
Sbjct: 1   MQRLQAVLLLCLACCWPGLADALTLTPEERAWLAEHPSIRLGVDTSWPPFEFRDEQGRYQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G    +   L   +   P+ ++       +     +  ++D+L          E    L+
Sbjct: 61  GLAAGYVSLLQERLGVSPTPVEPK--TWTQVLEQAKDGRLDLLPG---IMATPERQEYLS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +  K   +      L G  + V         L     A +     +  
Sbjct: 116 FTRPYLDFPIIILARKNGTMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             V     A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G  
Sbjct: 172 PSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
               IV     A ++AEE+   Q 
Sbjct: 230 ILAGIVDKVL-ADLSAEEIERLQA 252


>gi|116628343|ref|YP_820962.1| amino acid ABC transporter periplasmic protein [Streptococcus
           thermophilus LMD-9]
 gi|116101620|gb|ABJ66766.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus thermophilus
           LMD-9]
          Length = 276

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V  IL L ++   +          +  ++  +    ++    F   K + D+KG
Sbjct: 1   MKKWLAVMGILGLSVMTLAACGNKGDS--KVSGEKQTITVATDSDTAPFTFKKGD-DFKG 57

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  +++      D  +++++          + S +  I + + ++   R  +   +F
Sbjct: 58  YDIDLVKSVFKD--SDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEER--AQKYSF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                      I  +    +S+  LSG +  V  GT     L ++  A+  K   
Sbjct: 114 SDPISRSNYAIISAEGTKYTSLDDLSGKTTEVLPGTNYAQLLENWNHANADKTPI 168


>gi|153812172|ref|ZP_01964840.1| hypothetical protein RUMOBE_02569 [Ruminococcus obeum ATCC 29174]
 gi|149831827|gb|EDM86913.1| hypothetical protein RUMOBE_02569 [Ruminococcus obeum ATCC 29174]
          Length = 971

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 74/207 (35%), Gaps = 13/207 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              IL + ++         +   + ++   ++ G       F  V  NG  +G+  +  +
Sbjct: 15  IFVILGMWLMLSVHCQAAGTNNDEKQQTQTIRIGAFEDT--FNYVDKNGVRRGYGYELMQ 72

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           AL+        K +Y+  +    F  L++ +ID +  +  +T  R  +  + F      +
Sbjct: 73  ALA---GYTGWKFEYVKCDWSNCFDKLENGEID-IMGDISYTDER--AQKMLFPDEPMGE 126

Query: 126 GQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            +  +      +         L G  + V  GT  E+ L ++   + +    +     ++
Sbjct: 127 EKYILYADLSDMDIETSDFKSLDGKRVGVLLGTEPEIMLTEWENKNGIHTEHVNVNNNDD 186

Query: 182 IDAAYRAHRCDAYTG-DISALYALKLT 207
           ++     H  D +   + S     +++
Sbjct: 187 VEKKLANHEIDCFVSLEESIWSEQRIS 213


>gi|167549885|ref|ZP_02343643.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205352683|ref|YP_002226484.1| periplasmic amino acid-binding protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856869|ref|YP_002243520.1| periplasmic amino acid-binding protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|205272464|emb|CAR37353.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205324931|gb|EDZ12770.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|206708672|emb|CAR32998.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|326627750|gb|EGE34093.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 253

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|163789547|ref|ZP_02183985.1| hypothetical protein CAT7_08895 [Carnobacterium sp. AT7]
 gi|159875079|gb|EDP69145.1| hypothetical protein CAT7_08895 [Carnobacterium sp. AT7]
          Length = 289

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 27/272 (9%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVGFA 48
           M K      ++  + +   +  +N S              +I++RG +K   +  L   +
Sbjct: 1   MLKKIVGFGLITFVSMTLAACGSNESSSDSAKNTSDTAWSEIEERGAIKVATSGTLYPSS 60

Query: 49  EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             +A      G++V+  R +++ +     ++ +  +       ++ S  IDI +   D  
Sbjct: 61  FHEAETDKLTGYEVEIIREVANRL---DLEVDFTEMGVDGMLTSVNSGAIDIAAMGIDRN 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
                           F           GI ++  L G      A TT+ + +A +F A 
Sbjct: 118 GENADKYNYTIPYKYSFGAMVVRESDDSGIETLEDLKGKK-AAGAATTSYMKVARHFGA- 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             +         ++        R D    D  +              V            
Sbjct: 176 --EEVIYDNATNDQYLQDVANGRTDVILNDYYSQKMAVAALPEIPVKVHDIFYNPSETN- 232

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            AI +G+    + V+ T       EE+     
Sbjct: 233 YAIKKGNDLLTDKVNTTL------EEMKADGT 258


>gi|16764977|ref|NP_460592.1| periplasmic binding protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167992809|ref|ZP_02573905.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168241188|ref|ZP_02666120.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168260170|ref|ZP_02682143.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168462916|ref|ZP_02696847.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446811|ref|YP_002040881.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194447808|ref|YP_002045673.1| hypothetical protein SeHA_C1812 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197264247|ref|ZP_03164321.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|200391115|ref|ZP_03217726.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|224583875|ref|YP_002637673.1| periplasmic amino acid-binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|16420159|gb|AAL20551.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194405474|gb|ACF65696.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406112|gb|ACF66331.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195634156|gb|EDX52508.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197242502|gb|EDY25122.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|199603560|gb|EDZ02106.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205329038|gb|EDZ15802.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205339564|gb|EDZ26328.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205351204|gb|EDZ37835.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|224468402|gb|ACN46232.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261246826|emb|CBG24640.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993563|gb|ACY88448.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158161|emb|CBW17658.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312912621|dbj|BAJ36595.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321224256|gb|EFX49319.1| Putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323129902|gb|ADX17332.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 253

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|194467496|ref|ZP_03073483.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194454532|gb|EDX43429.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 487

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 103/309 (33%), Gaps = 20/309 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---- 57
            K+  ++I+ ++ +           +             N     F    + G +     
Sbjct: 6   IKNMIITIVAVLGIVVGWQMVEPQQVSA--AEPTYTFATNNTFEPFEIQDSKGGYSGKNP 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G +++  + ++     +  K +  P++      AL++ Q+D +      T  R+      
Sbjct: 64  GIEIEMLKKIAK---HEHFKYELKPMSFNGDLQALEAGQVDAVIAGMSVTDERKE--KYD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G    + K   I S+SQL G ++  ++GT+  L L +  K +  K     F+
Sbjct: 119 FSTPYYTSGVVMAVAKDSNIKSMSQLKGKTVSAKSGTSAALFLKNNQKKYGYK--IRYFD 176

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-E 236
               +    +     A   D   L       +     V+    I   P+A    +G   E
Sbjct: 177 SSNTMWNDVKTGNTAATFDDGPVL--EYGIKEGVPLKVVTKKPIDAQPVAVGYQKGKNLE 234

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR-FLGIDKSSNIGEALGLTKDW 295
               ++     +    ++        +  K T +    R  LG+ +++      GL   W
Sbjct: 235 LQKKMNDGIKWLKDTGQMDQIIDKYTKSDKTTKDSATDRTILGLIRANYPALLRGL---W 291

Query: 296 TYRIIRHMG 304
               +  +G
Sbjct: 292 MTIELTVVG 300


>gi|257866637|ref|ZP_05646290.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872847|ref|ZP_05652500.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257800595|gb|EEV29623.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257807011|gb|EEV35833.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 529

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 85/296 (28%), Gaps = 43/296 (14%)

Query: 1   MYKD-FFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K+ +  ++  L +       +   +     +       + G+  G   F       AN
Sbjct: 1   MKKNNWIWAVFALCLTLIQLPLTVQADDQTPAE-----QFRVGMEAGYAPFNWTQTTDAN 55

Query: 54  GDW-----------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           G              G+DV   + ++  +  +   +  +         ALQ+  ID +  
Sbjct: 56  GAVPISGEEGSAFAGGYDVQIAKRIAEGLGKE---LVIVKTQWDGLPPALQAGTIDAVIA 112

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELT 159
               T  R     + F    Y      ++ K        S++ LSGA I  Q  T     
Sbjct: 113 GMSPTAER--REQIDFTDPYYESDLVVVVRKDGAFADAKSLADLSGAKITAQLNTFHYTV 170

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           +    +    +           +  A  +   D Y  +          N    + V   +
Sbjct: 171 IDQIPEVQKEQ----AMRDFSSMRVALASGIIDGYVSERPEGVTAVGANPD-LKMVEFDE 225

Query: 220 IISKS------PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                       +A  + +GD +    V+     +   E + +  + +     D +
Sbjct: 226 GAGFETNPEDVQVAVGMRKGDPD-VEKVNEILAGISEEERVSLMDQAVLDQPADAS 280


>gi|168235755|ref|ZP_02660813.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194734479|ref|YP_002114659.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194709981|gb|ACF89202.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197291055|gb|EDY30408.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 253

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHEITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|322614883|gb|EFY11808.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619323|gb|EFY16203.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623135|gb|EFY19977.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628425|gb|EFY25213.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634832|gb|EFY31563.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638603|gb|EFY35298.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641008|gb|EFY37655.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645409|gb|EFY41937.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651706|gb|EFY48078.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654393|gb|EFY50715.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661234|gb|EFY57460.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665008|gb|EFY61196.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667752|gb|EFY63912.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671836|gb|EFY67957.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677118|gb|EFY73182.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680219|gb|EFY76258.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685352|gb|EFY81348.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194285|gb|EFZ79481.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198156|gb|EFZ83266.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204388|gb|EFZ89396.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205835|gb|EFZ90798.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323217164|gb|EGA01885.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222865|gb|EGA07223.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227240|gb|EGA11410.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232024|gb|EGA16131.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234551|gb|EGA18638.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238004|gb|EGA22063.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243395|gb|EGA27414.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248903|gb|EGA32828.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253703|gb|EGA37530.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258737|gb|EGA42396.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261769|gb|EGA45339.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266516|gb|EGA50003.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271240|gb|EGA54667.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 253

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|288960219|ref|YP_003450559.1| ABC transporter substrate-binding protein [Azospirillum sp. B510]
 gi|288912527|dbj|BAI74015.1| ABC transporter substrate-binding protein [Azospirillum sp. B510]
          Length = 309

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 30/263 (11%)

Query: 8   SILCLIILFFTSFSTN--------------ASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
             L  I+L       +              A  L  ++ RG L+ G   G   F + + +
Sbjct: 28  GALGAIMLTGAGAGASLVAAASGPAAAQQPADTLQQVRNRGELRIGAPPGEPWFFKDQRS 87

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+WKG       AL+  +   P  ++            LQ+ Q D+L    D T  R  +
Sbjct: 88  GEWKGIGWGAGVALAEELGVKPVAVE---TTWGTAVAGLQAGQFDVLFA-MDATPQR--A 141

Query: 114 LGLAFR-PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMK 170
           L + F     ++   G +        S + L      I V  GT+ +  L          
Sbjct: 142 LAVDFPVQPMFYYALGVLARDGLAAKSWNDLDKPDVRIGVVLGTSPDRELTVRL----TN 197

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                F  ++E+ AA+ + R DA +    AL  L+    R +  V+LPD I  +  +  +
Sbjct: 198 AKLERFPNIDEVGAAFVSGRVDAVSLFHPALVMLRSRVKRGT--VLLPDPIRAASTSAGV 255

Query: 231 IQG-DTEWYNIVSWTHYAMVTAE 252
            +  D  W + V     ++  + 
Sbjct: 256 RRDVDKSWRDWVGVAIQSLYESG 278


>gi|227499010|ref|ZP_03929147.1| L-cystine-binding protein tcyJ [Acidaminococcus sp. D21]
 gi|226904459|gb|EEH90377.1| L-cystine-binding protein tcyJ [Acidaminococcus sp. D21]
          Length = 276

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 70/215 (32%), Gaps = 6/215 (2%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   +          F      G+  G+DV+  + +     D     ++  +      +
Sbjct: 37  KEAQKIVVATRGTAKPFTYTDDKGNLTGYDVEILKEVERR--DPSLHFEFKAMAVDAAIV 94

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           A+ SKQ+D ++        RE        P  Y   +  +   +  I S+  L G  + +
Sbjct: 95  AMNSKQVDAIANQMRRNPAREGKYLYTNVPNNYTARKLVVKEGRTDIKSLDDLKGKKVAL 154

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            A +     + D  K +      I  ++   E        R DA       + A +   +
Sbjct: 155 TANSEFRDLINDLNKKNGNAIEAIYSDKGSAENLNLVATGRADAAGEYEYVVAAARKDKN 214

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            P   V +  +    P      + D ++ +++   
Sbjct: 215 LPV--VSVGPVFQSVPTYFMFRK-DPKFESVIQKI 246


>gi|189423631|ref|YP_001950808.1| PAS/PAC sensor hybrid histidine kinase [Geobacter lovleyi SZ]
 gi|189419890|gb|ACD94288.1| PAS/PAC sensor hybrid histidine kinase [Geobacter lovleyi SZ]
          Length = 940

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 68/223 (30%), Gaps = 11/223 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G+         +  NG  +G   D+ + ++  +      +     +  E    LQ  
Sbjct: 52  IHVGVMQDWPPMNYLDRNGTVQGIGADYLKTINRMLGGMLVPVPGPFRDNYEW---LQKG 108

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGT 154
           QID L    D T   E      F           +  K  G       L+G  I ++ G 
Sbjct: 109 QIDAL---MDITRTPERDALFDFTRPYISIPHVLVGRKSGGFYRQESDLTGKRIALEKGF 165

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                  + F A         +    E   A      DAY G+ + +  L    +     
Sbjct: 166 NNVTYFRNNFPA----VTVREYGSTAEALKAVARGEADAYAGNRAVVQHLLEKLELNGLM 221

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            +   I  +S L   + +G TE   I+     A+   E   I 
Sbjct: 222 PMGTLIAPRSVLQFGVAKGQTELLGILDKALAAIPAGERSAIA 264


>gi|254491149|ref|ZP_05104330.1| NMT1/THI5 like family [Methylophaga thiooxidans DMS010]
 gi|224463662|gb|EEF79930.1| NMT1/THI5 like family [Methylophaga thiooxydans DMS010]
          Length = 1410

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 74/219 (33%), Gaps = 11/219 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK GI+     +  +   G++ G   ++ R L   +  D S          E     + 
Sbjct: 340 VLKVGIDPDFAPYEWINEKGEYVGLAAEYIRLLEQRL--DVSFQIVHDKPWHEIMDMAKR 397

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            ++D+L    + T  RE    L F      +    +   +   + S+  L+G ++ ++ G
Sbjct: 398 GELDML-SCLNQTDSREEH--LDFTAPYVSNPVVIVNADRNGYVGSLDNLNGKTVAIEEG 454

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             T  TL   +         ++ E  ++      A   DAY GD  A     +  +    
Sbjct: 455 YFTHETLRSDYPE----ITLLLTENTQQALEKVAAGEADAYIGDA-AYANYAVKKNDLLN 509

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                 I   S     I + + E    ++     +  AE
Sbjct: 510 LQFAGQISETSAYRIGISKANPELLEAINMVLDNLTEAE 548


>gi|298346599|ref|YP_003719286.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC
           43063]
 gi|298236660|gb|ADI67792.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus curtisii ATCC 43063]
          Length = 298

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 78/279 (27%), Gaps = 32/279 (11%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNASILGDIK------------KRGFLKCGIN 41
           M K             L       ++    +     IK             R  L+  ++
Sbjct: 5   MKKISAAAGAVLLAGTLASCAGSTSAAGVKSYNFDSIKPDPEIVAMVPQANRETLRVVMD 64

Query: 42  TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
                   + +N    G++VD  +ALS  +     KI     +       +     D+  
Sbjct: 65  IPYSPAEFLDSNKQPVGYEVDVMKALSRLMGVSELKIS--DEDFDAIIPKVNDGTYDVGV 122

Query: 102 RNTDWTLLRE-ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
            +   T  R      + +    Y  G      K       +   G  +  Q+GTT   TL
Sbjct: 123 ASMTATKARMSRVNMVTYIQSGYIYGTQAGNPKN---FDPANSCGLKVAAQSGTTQAETL 179

Query: 161 AD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
                   KA       +  E  E++     A   DA  G+   +   +  N +      
Sbjct: 180 QANSDSCVKAGKPAIQVVTDEDQEKLIEQVAAGTLDAIIGESPIMAYAESRNPK---FAT 236

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +    +P  PA  + + E    +      M+    L 
Sbjct: 237 AGEAFQVAPQGPATAKDNPELAKAIQAGLQKMMDTGMLK 275


>gi|209559150|ref|YP_002285622.1| Putative ABC transporter [Streptococcus pyogenes NZ131]
 gi|209540351|gb|ACI60927.1| Putative ABC transporter [Streptococcus pyogenes NZ131]
          Length = 206

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 18/198 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           +K      L  ++L+  +    +  L     IKK   L   ++     F     V     
Sbjct: 3   FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 62

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G DV   +A++  +  D   ++  P++      +LQ+ + D+       T  R     
Sbjct: 63  IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             F    Y      +M       +  +S L+G  +  Q G+  E  +       N     
Sbjct: 118 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 173

Query: 174 IVFERVEEIDAAYRAHRC 191
           I    + E        R 
Sbjct: 174 ISLTAMGEAVQW-HKGRA 190


>gi|318076784|ref|ZP_07984116.1| substrate-binding protein transport system associated [Streptomyces
           sp. SA3_actF]
          Length = 528

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 16/190 (8%)

Query: 24  ASILGDIKKRGFLKCGI---NTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           A +  +IK +G L  G+     G      + ++     G + D  R +++ +   P    
Sbjct: 102 AQLPKEIKDKGELVIGVGVLPAGSPPLNFIGSDQKTVTGSESDLGRLVAATLGLKP---V 158

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
                 +  FL + S ++D    N   T  R+      F      D   F   K +  + 
Sbjct: 159 IRKSTWENMFLGIDSGKVDAAFSNVTDTEERKR--KYEFA-SYRQDNLAFETDKSQSWTF 215

Query: 140 VSQ---LSGASICVQAGTTTELTL---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 L+G ++ V +GT  E  L       K    K     +  +     A    + DA
Sbjct: 216 TGDYKVLAGKTVAVSSGTNQERILLNWQRQLKKQGKKLDVKHYPDLNSTYLALSGKKIDA 275

Query: 194 YTGDISALYA 203
           Y G   A+  
Sbjct: 276 YLGPNPAIAY 285


>gi|153834671|ref|ZP_01987338.1| amino-acid abc transporter binding protein [Vibrio harveyi HY01]
 gi|148868923|gb|EDL67981.1| amino-acid abc transporter binding protein [Vibrio harveyi HY01]
          Length = 489

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 113/330 (34%), Gaps = 23/330 (6%)

Query: 4   DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
             +  +L L+     +              L  IK++  L+  ++  L GF  +   G+ 
Sbjct: 9   KLWAGLLILLSTSSFALELSPLRQPPYTGDLDIIKEKNVLRVLVSADL-GFYYI-EGGEP 66

Query: 57  KGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           KG   +        +        IQ +P++  +   +L+    D++  N   T  R+ S+
Sbjct: 67  KGIGAELLAHFEKDLRKLKPKINIQIIPVSRDQLLPSLEQGLGDLVVANLTITDARKKSV 126

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHP 173
             +   IT              ++ + QLSG  I V+A ++   ++    K  +     P
Sbjct: 127 SFSDPVITGIQEWVVTDRDTPAMTKIEQLSGKEIWVRASSSYFESIQALNKKLNKKGLPP 186

Query: 174 IVFERVEEIDAA------YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           +V   +EE                 A   D                H  +P       +A
Sbjct: 187 VVVHFIEETLQDYELVGMLNNGYVKAIVLDSHKAKLWMNFMGGIRAHTKIPIRKGGE-IA 245

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
            A+     E   +V+       +   LG  I  K I+  +      + ++   ++K S++
Sbjct: 246 WAMRHDSPELMKVVNKFIRTAKSGTLLGNVIYGKYIDNTNWLNKALNPKKIAQLEKLSSL 305

Query: 286 GEALGLTKDWTYRIIRHMGNYGEM-FDRNL 314
               G   D+ Y +I  +  Y E  FD NL
Sbjct: 306 FSKYGEKYDFDYLLIAAVA-YQESGFDNNL 334


>gi|91205951|ref|YP_538306.1| amino acid ABC transporter substrate-binding protein [Rickettsia
           bellii RML369-C]
 gi|157826688|ref|YP_001495752.1| amino acid ABC transporter substrate-binding protein [Rickettsia
           bellii OSU 85-389]
 gi|91069495|gb|ABE05217.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           bellii RML369-C]
 gi|157801992|gb|ABV78715.1| Amino acid ABC transporter substrate binding protein [Rickettsia
           bellii OSU 85-389]
          Length = 241

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 10/197 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              ++   L  G +     +  ++ NG+  G D+D   A+   +     ++     +   
Sbjct: 17  EKKEQEATLIVGTSADNPPYEFIQ-NGEIVGIDIDIINAIGERLNK---RVIIKNFDFNG 72

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              AL S+ IDI       T  R     ++F           +   +  + S+  L    
Sbjct: 73  LLAALVSENIDIAVAELSVTPERAEY--ISFSDNYATAKFAVLYRLEDNVQSIGDLDNKI 130

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I VQ G+  E    +  K   M            +    +A   D    +       KL 
Sbjct: 131 IGVQLGSVLEKKAEELSKT--MNIKVHSLANSLMLVEELKAKVVDVIISEEFQN--KKLQ 186

Query: 208 NDRPSEHVILPDIISKS 224
              P+      +  S  
Sbjct: 187 EANPNLASYTLEEFSSE 203


>gi|295397439|ref|ZP_06807526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294974340|gb|EFG50080.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 555

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 33/262 (12%)

Query: 34  GFLKCGINTGLVGFAE------------VKANGDWK-GFDVDFCRALSSAIFDDPSKIQY 80
           G L+ G+      F                ++G++  G+DV   + L+ ++     +++ 
Sbjct: 56  GVLRVGMEANYAPFNWSQTSDADGAVPISNSDGEYANGYDVQIAKRLADSLG---LELEI 112

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--- 137
           + L       AL+S  ID++      T  R     + F    Y      +          
Sbjct: 113 VKLEWDGLPPALESGMIDVIIAGMSPTPER--LQQMDFSNSYYSSDIVLVTMADSEYADA 170

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S+   +G ++  Q  T       D              +    +  A  A   DAY  +
Sbjct: 171 TSLEDFAGTTVTGQLNTFHY----DLIPQIPDVTQATALDSFPTMITALTAGSVDAYVSE 226

Query: 198 ISALYALKLTNDRPSEHVILPDIIS-----KSPLAPAIIQGDTEWYNIVSWTHYAMVTA- 251
                A    N   +                S +A A  +      NI++     + TA 
Sbjct: 227 KPGAMAAVAANPDLTYVEFAEGQGFDLGEVTSDIAVAARKDSP-LTNIMNQALATIPTAD 285

Query: 252 -EELGITQKNINQVSKDTTNPD 272
            ++L     N+N+  +      
Sbjct: 286 RDQLMEDMVNLNERGESAGFWS 307


>gi|197250508|ref|YP_002146399.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197214211|gb|ACH51608.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 253

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|156973322|ref|YP_001444229.1| hypothetical protein VIBHAR_01003 [Vibrio harveyi ATCC BAA-1116]
 gi|156524916|gb|ABU70002.1| hypothetical protein VIBHAR_01003 [Vibrio harveyi ATCC BAA-1116]
          Length = 489

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 113/330 (34%), Gaps = 23/330 (6%)

Query: 4   DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
             +  +L L+     +              L  IK++  L+  ++  L GF  +   G+ 
Sbjct: 9   KLWAGLLILLSTSSFALELSPLRQPPYTGDLDIIKEKNVLRVLVSADL-GFYYI-EGGEP 66

Query: 57  KGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           KG   +        +        IQ +P++  +   +L+    D++  N   T  R+ S+
Sbjct: 67  KGIGAELLAHFEKDLRKLKPKINIQIIPVSRDQLLPSLEQGLGDLVVANLTITDARKKSV 126

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHP 173
             +   IT              ++ + QLSG  I V+A ++   ++    K  +     P
Sbjct: 127 SFSDPVITGIQEWVVTDKDTPAMTKIEQLSGKEIWVRASSSYFESIQALNKKLNKKGLPP 186

Query: 174 IVFERVEEIDAA------YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           +V   +EE                 A   D                H  +P       +A
Sbjct: 187 VVVHFIEETLQDYELVGMLNNGYVKAIVLDSHKAKLWMNFMGGIRAHTKIPIRKGGE-IA 245

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
            A+     E   +V+       +   LG  I  K I+  +      + ++   ++K S++
Sbjct: 246 WAMRHDSPELMKVVNKFIRTAKSGTLLGNVIYGKYIDNTNWLNKALNPKKIAQLEKLSSL 305

Query: 286 GEALGLTKDWTYRIIRHMGNYGEM-FDRNL 314
               G   D+ Y +I  +  Y E  FD NL
Sbjct: 306 FSKYGEKYDFDYLLIAAVA-YQESGFDNNL 334


>gi|254250429|ref|ZP_04943748.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124879563|gb|EAY66919.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 322

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 77/235 (32%), Gaps = 39/235 (16%)

Query: 6   FVSILCLIILFFTSFSTNASIL----------------GDIK---------KRGFLKCGI 40
                 L+ +     + +A  L                  IK         ++G L  GI
Sbjct: 20  LSGAFALLFIGAAGIAQSAPSLNLSPDQHDRPRVTPDAAAIKLIPENFRFVEKGVLTVGI 79

Query: 41  NTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
             G+   +          G D D  + ++  +     K++ +PL   +  LA+ S ++D 
Sbjct: 80  AVGVPPISVYATDAKTIVGADPDLAQLVADELG---LKLKLVPLAWADWPLAVASGKVDA 136

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTT 156
           +  N   T  R+      F      D  GF + +      I     ++G  +   +GT  
Sbjct: 137 VLSNVTVTEARK--QKFDFS-TYRRDVLGFYVEQNSAIKQIREPKDIAGLRVIGDSGTNQ 193

Query: 157 ELTLADYFK---AHNMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYALKLT 207
           E  L  + K   AH +K   +++     +   A  + R DA     + L      
Sbjct: 194 EKILLAWDKDNVAHGLKPIHVLYYDDPSVRTLALASGRADAIFSVNAVLAYQVSQ 248


>gi|227115100|ref|ZP_03828756.1| ABC transporter, substrate binding protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 327

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 34  GFLKCGIN--TGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G     I         A +   N    G + D  R ++ ++     ++  +P + ++  L
Sbjct: 77  GKFTVAIASLGSSPPLAFLADDNKTVIGSEPDIARLVADSLG---LELNIVPTSWEDWPL 133

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
            + S + D    N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 134 GVASGKYDAAIINITVTKARKE--KFDFA-TYRIDSLGFYVKSTSKIQSIKEAKDIAGLK 190

Query: 148 ICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L  + K +       + PI        + + ++ R DAY G       
Sbjct: 191 IIVGSGTNQEAVLLAWDKQNRANGLPAFQPIYVTDDAAANLSLQSGRSDAYFGPNVIGA- 249

Query: 204 LKLTNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            K       +HV   +    +   +A    +G +     ++     ++ + E        
Sbjct: 250 YKAELTGKVKHVGTVNGGYPNVAHIAVTTRKG-SGLVQPINTALNGVIKSGEYDKVLNRW 308

Query: 262 NQVSKDTTNPDVQ 274
            +  +     ++ 
Sbjct: 309 GESIERIDRSEIN 321


>gi|163735056|ref|ZP_02142493.1| periplasmic binding protein, putative [Roseobacter litoralis Och
           149]
 gi|161391838|gb|EDQ16170.1| periplasmic binding protein, putative [Roseobacter litoralis Och
           149]
          Length = 242

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 67/222 (30%), Gaps = 17/222 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G       +  +   G+  GF+ +    L +         +++          L 
Sbjct: 25  KTVRMGTEGAYPPYNFLNDAGEVDGFERELGDELCARA---ELTCEWVTNEWDSIIPNLV 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S   D++      T  R+    + F                   S+   L G  I  QA 
Sbjct: 82  SGNYDVIIAGMSVTDERDEV--IDFSEQYTLPDPS----AYLSASADVDLEGGVIAAQAN 135

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T     +A      +     + F   EE  AA +    DA   D + L  L   N  P  
Sbjct: 136 TIQASFIA------SSGAVLVEFATPEETVAAVKNGEADAVLADKAFLSELA--NADPDL 187

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            ++  +++    +   + + DTE     +    +M     L 
Sbjct: 188 MLLEQNVMIGGGIGLGLRESDTELKEKFNVAIRSMKEDGSLN 229


>gi|329922550|ref|ZP_08278125.1| ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB
           [Paenibacillus sp. HGF5]
 gi|328942094|gb|EGG38376.1| ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB
           [Paenibacillus sp. HGF5]
          Length = 295

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 10/244 (4%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +     S L    ++G++  G       +A  +ANG+  G  V+  R +   +     +
Sbjct: 29  AACGDKGSTLDRAIEQGYITVG-FANEKPYAYKEANGELTGEAVEIARVILERLGIKEMR 87

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
            +            LQ+ + D+++        R  ++  A    +  +           +
Sbjct: 88  GEL--TEFGSLVAGLQADRFDLITAGMFINPDRCSAVLFANPEYSIGEALAVKQGNPMEL 145

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S   ++       A  T  + +    K+       +         +A +A R  A T  
Sbjct: 146 GSYEDIAKNEQAKVAVMTGAVEIGYMEKSGIPADRIVQVPDQASAISALQADRVQAITMT 205

Query: 198 ISALYALKLTNDRPS-------EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +L A+  +    S       E  ++     +   A A  Q DTE+    +     M  
Sbjct: 206 GPSLQAMLDSASDDSIERVADFEQPVIDGESVRGYGATAFRQADTEFQEAYNAELEKMKE 265

Query: 251 AEEL 254
           + EL
Sbjct: 266 SGEL 269


>gi|313143981|ref|ZP_07806174.1| arginine-binding periplasmic protein [Helicobacter cinaedi CCUG
           18818]
 gi|313129012|gb|EFR46629.1| arginine-binding periplasmic protein [Helicobacter cinaedi CCUG
           18818]
          Length = 270

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 34/258 (13%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +    L I    + S N            L    +     F  +    ++KG D+D
Sbjct: 15  KSLALLTATLGIFTLNACSDND-----------LVVATSANFAPFEYIDGK-EFKGIDMD 62

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      +    +       +L S    I          R     + F    
Sbjct: 63  IAEVIAKKLNKK---LVIKDMEFDSVVTSLASGNAHIALSGLTINDTRSKV--IDFSQTY 117

Query: 123 YFDGQGFIMH-----------KKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168
           +   Q  I             K++ + ++  +    I VQ GT  E       D+     
Sbjct: 118 FSASQMVIARANDTRFANITTKEELLKTLQSIPNLKIGVQVGTAGEFYAKGDSDWGFEGF 177

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  F        A +  + D    D       +      S   ++   ++    A 
Sbjct: 178 HNAQVKSFSNGALAAIAMKNEQIDIVIIDE---MPAREIVKANSGTQLIDIALTNEKYAI 234

Query: 229 AIIQGDTEWYNIVSWTHY 246
            I   D E  + ++    
Sbjct: 235 GIAPNDKELKDSINAILN 252


>gi|224437530|ref|ZP_03658488.1| extracellular solute-binding protein [Helicobacter cinaedi CCUG
           18818]
          Length = 274

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 34/258 (13%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +    L I    + S N            L    +     F  +    ++KG D+D
Sbjct: 19  KSLALLTATLGIFTLNACSDND-----------LVVATSANFAPFEYIDGK-EFKGIDMD 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++  +      +    +       +L S    I          R     + F    
Sbjct: 67  IAEVIAKKLNKK---LVIKDMEFDSVVTSLASGNAHIALSGLTINDTRSKV--IDFSQTY 121

Query: 123 YFDGQGFIMH-----------KKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168
           +   Q  I             K++ + ++  +    I VQ GT  E       D+     
Sbjct: 122 FSASQMVIARANDTRFANITTKEELLKTLQSIPNLKIGVQVGTAGEFYAKGDSDWGFEGF 181

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  F        A +  + D    D       +      S   ++   ++    A 
Sbjct: 182 HNAQVKSFSNGALAAIAMKNEQIDIVIIDE---MPAREIVKANSGTQLIDIALTNEKYAI 238

Query: 229 AIIQGDTEWYNIVSWTHY 246
            I   D E  + ++    
Sbjct: 239 GIAPNDKELKDSINAILN 256


>gi|227112143|ref|ZP_03825799.1| octopine-binding periplasmic protein [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 289

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 75/243 (30%), Gaps = 38/243 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     + C + +  T  ++  +   + KK   ++         +   K +G   G +
Sbjct: 1   MIKSKLTLLACSLCMAGTLAASFTASAEE-KKWTTVRIATEGAYHPYNFTKPDGTLDGME 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + L + +     K + +         AL + + D +      T  R     + F  
Sbjct: 60  IELYKVLCNNM---QVKCEIMVQPFTSTIPALNAGKFDAIISGMSATEKR--REVIDFSQ 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------------------------LSGASICVQAGT 154
                GQ F + K   ++                              L G +I VQ+ +
Sbjct: 115 PYTQAGQTFAVLKSSKLAKAFPDAGQRFSINPADEATAKAEIEKLKPLLEGKTIGVQSAS 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L  Y K          ++  +E D   +A R D           LK  +++P   
Sbjct: 175 IASAFLDKYMK---GVMKVREYKTTQEHDLDLKAGRVDLVIASAP---YLKSISEKPGNA 228

Query: 215 VIL 217
            I+
Sbjct: 229 DIV 231


>gi|222087539|ref|YP_002546076.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221724987|gb|ACM28143.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 265

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 67/240 (27%), Gaps = 17/240 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
            + F + +  L++  F SF+ +   L        +             V    G   G++
Sbjct: 4   RRSFLLGLTALVLAPFASFAADLPNLNG----KTVVVVTENAYPPLQFVDPKSGKAIGWE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +     K++Y   +      A+   Q +     T  T+  +    + F  
Sbjct: 60  YDAMNEIAKRL---NFKVEYQNTSWDAMIQAVSQGQYN--IGMTGITIKEDRKQKVDFSD 114

Query: 121 ITYFDGQGFIMHK----KKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIV 175
                 Q  ++           S S      +  Q GTT     + +    +       +
Sbjct: 115 PYMRSQQFMLVRSDEKRFTDAKSFSAFKDGLVGAQPGTTPFYTAVYEVLDGNEQNPRIKL 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE       A +    D    D +A       ++      ++   +          +G  
Sbjct: 175 FETFGATVQALKTGDVDTVLTDGTAGKGYVDASNGG--LKMIGGPLGTEDFGFIFPKGSD 232


>gi|86360053|ref|YP_471942.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86284155|gb|ABC93215.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 314

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 20/197 (10%)

Query: 23  NASILGDIK-----KRGFLKCG--INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           N   + +IK     + G    G   +  L        +    G+DVD  +A++ ++    
Sbjct: 46  NEKRIAEIKDFKFVESGVFTVGISTSGNLPLHDYASDSKTVIGYDVDLAQAIADSLG--- 102

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+  + +   +  L L S + D +  N   T  R+      F      D  GF +    
Sbjct: 103 LKLNLVSVAWADWPLGLTSGKFDAVISNVTVTEERKE--KFDFS-TYRKDELGFYVSADN 159

Query: 136 GISS---VSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRA 188
            I+S      ++G  +   AGT  E  L ++ + +    +K   + +   + +   A ++
Sbjct: 160 PITSIKEPKDIAGLKVITDAGTNQEKILLEWDRENVAAGLKPIEVQYYDDDAVKDLAVQS 219

Query: 189 HRCDAYTGDISALYALK 205
            R DA     +      
Sbjct: 220 GRADAVFSVNATQAYAA 236


>gi|225026716|ref|ZP_03715908.1| hypothetical protein EUBHAL_00968 [Eubacterium hallii DSM 3353]
 gi|224955977|gb|EEG37186.1| hypothetical protein EUBHAL_00968 [Eubacterium hallii DSM 3353]
          Length = 961

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 73/204 (35%), Gaps = 17/204 (8%)

Query: 2   YKDFFVSILCLIILF-----FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            K   V  +C++++       +  S  A    D K+   ++ G       F  V  NG  
Sbjct: 5   RKKSAVLFVCILLVLGMWMMLSVHSQAAETNNDEKQAQTIRVGSFEDT--FNYVDKNGVR 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G+  +  +AL+        K +Y+  +  + F  L++ +IDI+      +   E +  +
Sbjct: 63  RGYGYELMQALA---GYTEWKFEYVKCDWSDCFDKLENGEIDIMGD---ISYSDERAQKM 116

Query: 117 AFRPITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F      + +  +      +         + G  + V   T  E+ L ++   + +   
Sbjct: 117 LFSDEPMGEEKYILYADLSNMDIGMSDFKFMDGKRVGVLMDTEPEIMLTEWENKNGIHTE 176

Query: 173 PIVFERVEEIDAAYRAHRCDAYTG 196
            +      +++     H  DA+  
Sbjct: 177 HVNVNNDNDVEKKLANHEIDAFVS 200


>gi|315151111|gb|EFT95127.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
          Length = 546

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 42  TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 102 ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 156

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     S+  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 157 GKYTNAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 212

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 213 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 271

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 272 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 313

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 314 GDMFLR--GAGLTLFIA 328


>gi|146309043|ref|YP_001189508.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Pseudomonas mendocina ymp]
 gi|145577244|gb|ABP86776.1| periplasmic sensor diguanylate cyclase/phosphodiesterase
           [Pseudomonas mendocina ymp]
          Length = 1244

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 78/269 (28%), Gaps = 16/269 (5%)

Query: 9   ILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + L+ L + +    A  L +     +  +  L+ G++T    F      G ++G   D+
Sbjct: 6   AILLLCLAYWTTPALALTLSEEERTWLAAQAELRLGVDTSWPPFEFRDDQGRYQGLTADY 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            R + S +      ++  P +  E     ++ QI +L          E    L F     
Sbjct: 66  VRLIESRLGLKLQPVE--PSSWSEVLDQARAGQIHLLPGVMS---TPERQDYLVFTRPYL 120

Query: 124 FDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                 +          +  L G  + V A       L    +  +     +    V   
Sbjct: 121 DFPIVILARNGGPQPRKLRDLYGLKVAVVADYAPHELL----RQQHPDLSLMPLPSVAAA 176

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A    + DA  GD+++             ++          LA A  +       I+ 
Sbjct: 177 LQALATGQADALVGDLASSVWSLRQLKLDGLYISGETPYRYQ-LAMAAPRNHAILAGILD 235

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNP 271
                +  AE   +    I  V    +  
Sbjct: 236 KLFAELSPAEVAALQTPWIGSVLDKRSAW 264


>gi|153010843|ref|YP_001372057.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562731|gb|ABS16228.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 283

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 79/276 (28%), Gaps = 41/276 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        + +  L  TS S +A    + KK   +          +   K +G   G++
Sbjct: 1   MKTTGLFKAVFISALALTSVSAHA----EEKKWTKITIATEGAFRPYNFTKPDGSLDGYE 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  + L + +  +      +         AL + + D +      T  RE +  ++F  
Sbjct: 57  VDLYKDLCARMKVE---CTMVAQPFDSIIPALNAGKFDAIMAGLTATPKREET--ISFSI 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQ------------------------LSGASICVQAGTTT 156
                 Q F   K    + +                          + G ++ VQ  +  
Sbjct: 112 SYGLTPQTFATLKDSPYAKLPHTGETLYLAKDEAAAQKAIDEVSAEIKGRTVGVQTASLG 171

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L  YFK          ++  E+ D   ++ R D     + A            + V+
Sbjct: 172 LSLLDKYFK---DGIDIREYKTTEQHDLDLKSGRVDLIVASL-AYLTDAAKKPGNEDIVM 227

Query: 217 LPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248
                    L       + + DTE   +      A 
Sbjct: 228 TGPFFKGGILGRGVAVGLRKDDTELKKMFDVAIEAA 263


>gi|116250759|ref|YP_766597.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255407|emb|CAK06482.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 324

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 12/231 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKER 88
           IK  G LK   +      +    +G   G D D   AL   +  D   ++   +      
Sbjct: 74  IKSSGVLKVATDLT-PPISFHGEDGKLIGIDADIAAALGVILGVD---VEMTDVGAGAAI 129

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGA 146
             ++ +K+ DI           E+   +       +D    +  K     I  +  L G 
Sbjct: 130 VPSILAKRFDISISG--INDDPELEKQVDVID-YMYDATTIMTIKDNPLAIKGMEDLCGK 186

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALK 205
            + V  GT     +           + +   ++ ++  A R  R DA      +++Y  +
Sbjct: 187 KVAVPVGTFQARMVEAASAKCATPVNIMSIPKMPDVLQAVRTGRADATVNGYATSVYTTE 246

Query: 206 LTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                      LPDI      L     + + +  + V      MV +    
Sbjct: 247 HQTGNGKGLQALPDIRLAVGYLGMLTAKDNPQLRDSVVAALQQMVDSGAYE 297


>gi|111225332|ref|YP_716126.1| arginine ABC transporter periplasmic substrate-binding protein
           [Frankia alni ACN14a]
 gi|111152864|emb|CAJ64611.1| putative arginine transport protein (ABC superfamily, peri_bind)
           [Frankia alni ACN14a]
          Length = 239

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 13/202 (6%)

Query: 38  CGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +           +G    G D+D  RAL   +     K+Q   +        L S +
Sbjct: 1   MATDPSYAPNEFFDTDGKTIIGMDIDLARALGGVLG---LKVQPTQVVFDSILPGLASGR 57

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTT 155
            D+   +   T  RE    + F                   I++++ L G ++ V+ GTT
Sbjct: 58  YDVGMSSFTDTKEREK--QVDFVTYYSAGTSFMTRGEDGAEIATLADLCGHTVAVETGTT 115

Query: 156 TELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            +    D       A   K     ++     + A  + R +  +   S +   +      
Sbjct: 116 QQTDAGDQSGRCTAAGKPKVTVQNYDDQNGANLALTSGRAE-VSMADSPVADYQAKLSGG 174

Query: 212 SEHVILPDIISKSPLAPAIIQG 233
               I+      +P   A+ + 
Sbjct: 175 K-IRIVGKPYGTAPYGIAVPKN 195


>gi|296447274|ref|ZP_06889203.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
 gi|296255236|gb|EFH02334.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
          Length = 278

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 63/226 (27%), Gaps = 19/226 (8%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IK+   ++         F     +G   GF+VD  RAL   +               
Sbjct: 43  LSTIKQ---IRFLTEDDYPPFDFALPDGTVAGFNVDLARALCEEL---EVVCTIQRRRFD 96

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLS 144
               AL+    D    +            + F    Y     F++ K   +   + S L+
Sbjct: 97  LIVAALEEGAGDAAVASMAV--SDAARKAVDFTAPYYTTPGRFVIRKDSLLPAATPSALA 154

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             +I V  G   E  L  +F           F   ++  AA +  R  A  GD   L   
Sbjct: 155 DRTIAVAEGGAHEAFLKTFFPKA----TLATFPTAQQARAALKEGRAHAMFGDAITLAFW 210

Query: 205 KLTNDRP-----SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +        +            +  A+ + +      + +  
Sbjct: 211 LNGQEAGECCRFMDGPFTDPRFFGDGVGIAVRKNNVALRRALDYAL 256


>gi|288959763|ref|YP_003450103.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288912071|dbj|BAI73559.1| polar amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 290

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 64/241 (26%), Gaps = 10/241 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  I++ G ++ G       F+   A+G   G D++  + L+ A+        ++  +
Sbjct: 58  GALQAIRQAGVVRVGTTGDYKPFSYKGADGALVGADIEMAKELAGALGVRAE---FVQTS 114

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY--FDGQGFIMHKKKGISSVSQ 142
            K      ++ + DI          R      +   ++             K        
Sbjct: 115 WKTLLDDFKADKFDIALGGITVNPDRAAVGDFSVANVSDGKRPIARCADKDKFTTVEKID 174

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T E      F          V+   + I A   A + D    D     
Sbjct: 175 QPTTRVVVNPGGTNEKFARATFTKA----PIEVWPDNKTIFAQIAADKADVMVTDGIEAD 230

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
                N      V +    +    A  + + D E    V       ++            
Sbjct: 231 MQAKLNPGVLCAVPVASPFTHFENAYLLRK-DPELKQAVDAWMTGALSGGLWKAKLDAAM 289

Query: 263 Q 263
           Q
Sbjct: 290 Q 290


>gi|323700495|ref|ZP_08112407.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio sp. ND132]
 gi|323460427|gb|EGB16292.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio desulfuricans
           ND132]
          Length = 1086

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 14/206 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F ++IL   +L   +    +    D+     L+         FA  + +G   GF VD 
Sbjct: 20  RFILTILLPAVLVSLAAPALSPA-EDVPA--VLRSASELDYPPFALARPDGAADGFSVDL 76

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA++        ++++      +    L   ++D+L     W+  R+      F     
Sbjct: 77  LRAVAREAG---LEVRFKVGPWADIKRELAEGRLDVL-PLVSWSPERDAF--FDFTIPYL 130

Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                  + K    I S + L    + V  G T E    +Y + +++    +      + 
Sbjct: 131 QMHGSIFVRKGTRDIESEADLKDKVVLVMRGDTAE----EYAERNHLAGKLLPQRSYVQA 186

Query: 183 DAAYRAHRCDAYTGDISALYALKLTN 208
                  + DA        + +    
Sbjct: 187 LRMLSEGQGDAVLVQQVVGWQIVKKL 212


>gi|168819429|ref|ZP_02831429.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205343752|gb|EDZ30516.1| putative periplasmic binding protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
          Length = 253

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|329908337|ref|ZP_08274850.1| extracellular solute-binding protein, family 3 [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327546734|gb|EGF31679.1| extracellular solute-binding protein, family 3 [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 277

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 70/235 (29%), Gaps = 14/235 (5%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPS 76
            + +     L  +   G L+  I     G        G   G D+D   AL   +     
Sbjct: 20  CAVAAAPERLQRVLDAGELRVCIWPEYYGITYRNPKTGQLAGIDIDIATALGKELG---V 76

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKK 135
           +++Y+  +       L + Q DI       T  R   L   F       D          
Sbjct: 77  RVRYVDSSFGLLVDKLLTDQCDIAMHAVGVTPARSAQLA--FTQPYLRSDIYAVTAANNP 134

Query: 136 GISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            I S + L   G  I VQAGT  E  +    +        +V +     +    + R DA
Sbjct: 135 AIKSWADLDQPGRVIAVQAGTVMEPIMQRALRQA----TLLVVKPPMSRENEVESGRADA 190

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +  D        L     +  +  P    ++  A A+  GD      V      +
Sbjct: 191 FMTDFPYSQ-RMLDLTTWARVIASPQPFHQTDYAYALAPGDASLLTRVDRFMQVI 244


>gi|259418317|ref|ZP_05742235.1| extracellular solute-binding protein, family 3 [Silicibacter sp.
           TrichCH4B]
 gi|259345712|gb|EEW57556.1| extracellular solute-binding protein, family 3 [Silicibacter sp.
           TrichCH4B]
          Length = 235

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 63/216 (29%), Gaps = 19/216 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G   G   +  +   G+  GF+ +    L           +++  +       L S
Sbjct: 22  TIRLGTEGGYPPYNFINDAGEVDGFERELGDELCKRA---ELTCEWVTNDWDSIIPNLLS 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  R+  +   F                  +S    ++ + +  Q+GT
Sbjct: 79  GNYDAIIAGMSITDERKEVVA--FTEGYTLPSPS----AYAAMSEGLDVNASVVAAQSGT 132

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +A+           + F   +E  AA  +   D    D   L  +       ++ 
Sbjct: 133 IQAAHVAE------SGATLVEFPTPDETIAAVNSGEVDVVMADKDFLAPIV----DETDL 182

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           V L D+     +  A  Q D E          +M  
Sbjct: 183 VFLGDVYLGGGIGMAFRQSDDELRGKFDAAIASMKE 218


>gi|134293335|ref|YP_001117071.1| glutamine ABC transporter periplasmic protein [Burkholderia
           vietnamiensis G4]
 gi|134136492|gb|ABO57606.1| L-glutamine-binding protein [Burkholderia vietnamiensis G4]
          Length = 209

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 10/205 (4%)

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F   + +  + GFD+D    ++             P++      ALQ++ ID+      
Sbjct: 2   PFEFKQGD-KYVGFDLDLWAEIAKDPGWKY---TIQPMDFAGLIPALQTQNIDVALSGMT 57

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
               R+ ++  +  P         +      I S+  L+G  I  + GT T     D+ +
Sbjct: 58  IKEERKKAIDFS-APYYDSGLAAMVQTGNTSIKSIDDLNGKVIAAKTGTATI----DWIE 112

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
           AH        F  +++   A  A R DA     +      + N+   +  +    +S   
Sbjct: 113 AHLKPKEIRQFPNIDQAYLALEAGRVDA-AMRDTPNVPFFVNNEGKGKVKVAGQPVSGDQ 171

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVT 250
                 + +     I +   YA++ 
Sbjct: 172 YGIGFPKVNASPVKIKADGRYALIY 196


>gi|91774051|ref|YP_566743.1| multisensor signal transduction histidine kinase [Methanococcoides
           burtonii DSM 6242]
 gi|91713066|gb|ABE52993.1| bvgS precursor-like multisensor signal transduction histidine
           kinase [Methanococcoides burtonii DSM 6242]
          Length = 682

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 85/253 (33%), Gaps = 18/253 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGFD 60
           YK   + I  L+++  TS    A         G + + GI       A V  NG  KGF+
Sbjct: 15  YKICSICIFALLLITITSTPAVA--------TGEIVRIGIEE-YAPIAYVDDNGFVKGFN 65

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   I+Y+P    E    L+S +I+++     +T  R+     A   
Sbjct: 66  VDIIEYIAREEGWE---IEYVPSTWSECIDNLESGEINLII-TMIYTEERDEKYDYA-SE 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               D     +    GI S++ L G  I       T     ++ + + ++Y  I    V 
Sbjct: 121 PFITDWAQLFIRSNTGIHSITDLEGTIISGITDDQTTTWFKEHAERYELEYELIETNSVS 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                       A      +     L+ +   E   + + +     A  +   D E    
Sbjct: 181 SSLEPIDDGTATAVILSRIS--GNALSKEHGIEGAPI-ESLPIEIYAATLEGNDQEILVT 237

Query: 241 VSWTHYAMVTAEE 253
           +      M   E+
Sbjct: 238 IGKHLEVMKEEED 250


>gi|320160625|ref|YP_004173849.1| amino acid ABC transporter substrate binding protein precursor
           [Anaerolinea thermophila UNI-1]
 gi|319994478|dbj|BAJ63249.1| amino acid ABC transporter substrate binding protein precursor
           [Anaerolinea thermophila UNI-1]
          Length = 291

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 40/264 (15%)

Query: 1   MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRG---------------------FL 36
           M +     F+ ++  ++L   + S+ +S     ++                        +
Sbjct: 1   MKRLSIWMFLVLVFGLVLSACAPSSGSSAGETSQESQGNAQTGCLGSADTALVDLQCRKI 60

Query: 37  KCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              +    + F  +  A G+  G+D D  R + + +  +P    ++         A+  K
Sbjct: 61  TVAVENAYMPFNYILVATGEPGGWDYDALREICTRLHCEP---VFVEAAWDGMIQAVADK 117

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----KKGISSVSQLSGASICVQ 151
           Q D+ +     T   +    + F        Q  ++ K       I   +      +  Q
Sbjct: 118 QYDMAADGITITE--DRKQIVDFSIGYISINQRLLVRKGETRFASIEEFAANEALVLGTQ 175

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             TT   T   Y            FE+      A  +   DA   D +A    +   +  
Sbjct: 176 INTTNYETAKKYLPE----SRIKGFEQFAFAVQALISGDVDAVIIDETAGQGYR--GENA 229

Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235
            +  ++   IS   L     +G  
Sbjct: 230 EKLELIGPSISSDELGFIFPKGSD 253


>gi|227543804|ref|ZP_03973853.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus reuteri CF48-3A]
 gi|300908873|ref|ZP_07126336.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|68160832|gb|AAY86862.1| lr1198 [Lactobacillus reuteri]
 gi|227186181|gb|EEI66252.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus reuteri CF48-3A]
 gi|300894280|gb|EFK87638.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 487

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 102/309 (33%), Gaps = 20/309 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---- 57
            K+  ++I+ ++ +           +             N     F    + G +     
Sbjct: 6   IKNMIITIVAVLGIVVGWQMVEPQQVSA--AEPTYTFATNNTFEPFEIQDSKGGYSGKNP 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G +++  + ++     +  K +   ++      AL++ Q+D +      T  R+      
Sbjct: 64  GIEIEMLKKIAK---HEHFKYELKSMSFNGDLQALEAGQVDAVIAGMSVTDERKE--KYD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G    + K   I S+SQL G ++  ++GT+  L L +  K +  K     F+
Sbjct: 119 FSTPYYTSGVVMAVAKDSNIKSMSQLKGKTVSAKSGTSAALFLKNNQKKYGYK--IRYFD 176

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-E 236
               +    +     A   D   L       +     V+    I   P+A    +G   E
Sbjct: 177 SSNTMWNDVKTGNTAATFDDGPVL--EYGIKEGVPLKVVTKKPIDAQPVAVGYQKGKNLE 234

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR-FLGIDKSSNIGEALGLTKDW 295
               ++     +    ++        +  K T +    R  LG+ +++      GL   W
Sbjct: 235 LQKKMNDGIKWLKDTGQMDQIIDKYTKSDKTTKDSATDRTILGLIRANYPALLRGL---W 291

Query: 296 TYRIIRHMG 304
               +  +G
Sbjct: 292 MTIELTVVG 300


>gi|213579867|ref|ZP_03361693.1| lysine-arginine-ornithine-binding periplasmic protein precursor
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
          Length = 118

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 13/130 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L + +    +                ++ G +T    F+   A GD+ GFD
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFIGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   +     K  ++  +      +L++K+ID +  +   T  R     +AF  
Sbjct: 53  IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107

Query: 121 ITYFDGQGFI 130
             Y      I
Sbjct: 108 KLYAADSRLI 117


>gi|120611141|ref|YP_970819.1| cyclohexadienyl dehydratase [Acidovorax citrulli AAC00-1]
 gi|120589605|gb|ABM33045.1| cyclohexadienyl dehydratase [Acidovorax citrulli AAC00-1]
          Length = 260

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 14/241 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  I     L+ G       FA +KA+G + G D+D   A++  +      I+Y+P
Sbjct: 26  AGPRLDRIMDTKVLRVGTPGDYRPFA-IKADGGYAGHDIDVVEAMAKELGVK---IEYVP 81

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSV 140
            +       +Q+ + D+        + R   + +   P     G+  ++    K    ++
Sbjct: 82  TSWPNLMKDIQADRFDVAVGGITRNVTRIRQIEML--PGYAPFGKVALVRASDKDRFRAL 139

Query: 141 SQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + L+   + V      T E  + +  KA          ++  EI A     + D    + 
Sbjct: 140 ADLNRPGVRVIKNPGGTNETFVLENLKAA----DVSTHDKNAEIPALIAEGKGDVMITET 195

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
                    + R     +   +  ++ L   + + D ++  ++ +    M    +L    
Sbjct: 196 YEALHYAKADPRLHAAFVAAPLTPQNTLGFMLPKDDADYSRVMEFVWGLMEARGQLKQAA 255

Query: 259 K 259
            
Sbjct: 256 D 256


>gi|327440166|dbj|BAK16531.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Solibacillus silvestris
           StLB046]
          Length = 278

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 89/272 (32%), Gaps = 29/272 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55
           M K   + +  + +L   +  ++   +  G    +  +K G+      F       ANG 
Sbjct: 1   MKKRLLILLTAMTMLLLAACGSSDEGTTSGSDSDKKVIKIGMEAAYAPFNWSQKDDANGG 60

Query: 56  WK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            +         G+DV+  + ++  +     ++Q +  +      +LQS  ID++      
Sbjct: 61  VQIASSKEFAAGYDVEIAKKIAEGL---DMELQIVKTDWDGLIPSLQSGAIDLVIAGMSP 117

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADY 163
              R+    + F    Y      ++ +       +S+   +GA I  Q  TT    +   
Sbjct: 118 MPERKEV--IDFTENYYTSDYVIVVKEDGPYANATSLPDFAGAKITGQQSTTHYDVIDQI 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                     +       +    ++   D Y  +     + ++  +     V  P+  + 
Sbjct: 176 EGVQKQ----VAATDFGAMRVQLQSGAIDGYVSERPEGISAEMALNNIKYIVPEPNFEAD 231

Query: 224 SPLAPAII--QGDTEWYNIVSWTHYAMVTAEE 253
                  +  +  ++    ++    A ++ EE
Sbjct: 232 EASTAVAVGLKKGSDLREQINKVL-AEISEEE 262


>gi|227328459|ref|ZP_03832483.1| ABC transporter, periplasmic binding protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 298

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 88/276 (31%), Gaps = 35/276 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN------------------ASILGDIKKRGFLKCGINT 42
           M K  F   L ++ +  ++FS +                  A +   + ++GF+  G N 
Sbjct: 1   MKKPLFTFPLLMLSVLPSAFSADQNVPTTRTFQVQSDAALKAKVPEAVLQKGFIVAGTNP 60

Query: 43  GLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDIL 100
                   + +     G ++D   A+   +      + +            L+S + D+ 
Sbjct: 61  NTPPTTFYQEDNKTLAGREIDIMNAIGDRLG---VPVNWNDTGGFDNIIPGLKSGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N + T  R     + F           I  K   +   +S+S L G  +   AGTT  
Sbjct: 118 LSNINATPKR--LEQIDFIGYFNASKLAIISLKDANVAPFTSLSVLCGKEVGAGAGTTQL 175

Query: 158 LTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           L L +                +F        A  + R   + G    L        R + 
Sbjct: 176 LRLQEADKQCVAEQKDAIKIAIFPDRPSGVQAVISGRVPLFFGPYEGLRYQVSQVKRLT- 234

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +     ++ +P++ A  + D+   + V     +++
Sbjct: 235 -ISGDIAVNDAPVSIAFPK-DSALEDAVQAALNSLI 268


>gi|239995059|ref|ZP_04715583.1| hypothetical protein AmacA2_11295 [Alteromonas macleodii ATCC
           27126]
          Length = 302

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 24/229 (10%)

Query: 3   KDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K F V  + L ++  ++ S    A  L DIK  G ++  + T    F+ +  N +  G D
Sbjct: 5   KPFRVIFILLCLITGSALSAFGEARSLDDIKDSGLIRIAVYTDYPPFSFI-ENDNPTGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLP--LNAKERFLALQSK------QIDILSRN---TDWTLL 109
           +D  R ++SA+  +   I   P      +    L         + D++ R      ++  
Sbjct: 64  IDIAREIASALGVELELIWMTPGETTEDDFRNYLWKGHIIHRIKADVMMRAPYDPSFSQK 123

Query: 110 REISLGL------AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLA 161
           R+    L       F P    +    I + +    + ++      +I  +  +     L 
Sbjct: 124 RDDVGLLVNELVHMFAP-YQRESWQIIHNTQTLPEVETMGMFQYHTIGAEIDSIPHFYLT 182

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             F     +     +    E   A +A   +A  G  S +  L    D 
Sbjct: 183 SAFGGRLREKTS-HYGSNAEAIDAMKAGTVEAVMGLRSQISYLSQFVDN 230


>gi|224541409|ref|ZP_03681948.1| hypothetical protein CATMIT_00571 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525655|gb|EEF94760.1| hypothetical protein CATMIT_00571 [Catenibacterium mitsuokai DSM
           15897]
          Length = 299

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 59/225 (26%), Gaps = 31/225 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN------- 53
           M K         ++L     S                 G+      F    +        
Sbjct: 29  MKKTLITLAAAALVLSGCGSSPKED-------DNTFTVGMEAAYQPFNWQTSKKTDTAVK 81

Query: 54  -----GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                G   G+DV     ++        K+    +       A++S +ID +        
Sbjct: 82  LDGGAGYADGYDVVVASKIAK---KLGKKLVVKKIAWDGLQPAVESGEIDAIIAGMTADK 138

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFK 165
            RE   GL F    Y      I+ K   ++S +     SG  +  Q  T  +  +     
Sbjct: 139 KREK--GLDFTTPYYQSEMVMIVRKNSTMTSFNDIQQFSGYKVTGQKNTNYDTIIDQIKG 196

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             +            E+  A +    D  T ++     +   N  
Sbjct: 197 VKHQTPK----STYPELVVALQQGDTDGITAELPVANGIVQANPD 237


>gi|218133962|ref|ZP_03462766.1| hypothetical protein BACPEC_01851 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991337|gb|EEC57343.1| hypothetical protein BACPEC_01851 [Bacteroides pectinophilus ATCC
           43243]
          Length = 303

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 86/292 (29%), Gaps = 39/292 (13%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K  F  + +  +++  FT   + +      +   +  L+ G+      F   + +   
Sbjct: 12  MKKKIFAIIMLCVMVVSCFTGCGSKSGNETPTNASGKKVLRVGMECAYAPFNWTQESATM 71

Query: 57  K----------------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                            G+DV   R L+  +  D   ++   +      L++ +   D +
Sbjct: 72  SDGSQAVPIYGTNYYAYGYDVMVARMLADKLDMD---LEIHKVEWNSIGLSMDAGDYDCI 128

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT- 159
                 T  RE +    F  + Y+     ++ K     + ++LS         TT   T 
Sbjct: 129 IAGMGKTKAREATYA--FTDVYYYRSDCLVVKKGSAYENYTKLSDFKGKGVTTTTQIGTC 186

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
             D             +E   E   A      D    D+    + +LTN       +   
Sbjct: 187 WVDMMGQIPDAKIGANYETCAEAFMAITNGVADVCMVDLPTAISAQLTNPDLVILQLDSS 246

Query: 220 IISKSPLA-----PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               +         A  + DT   + ++             +   N +++ K
Sbjct: 247 DGLVNDTGSQNVCIATRKSDTALKDTLNQAM--------KDLNWNNKDEMDK 290


>gi|330821006|ref|YP_004349868.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia gladioli BSR3]
 gi|327373001|gb|AEA64356.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia gladioli BSR3]
          Length = 316

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 63/186 (33%), Gaps = 14/186 (7%)

Query: 33  RGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +G L  G+  G               G+D D  + ++  +     K++ +PL   +  LA
Sbjct: 66  KGELTVGLAPGSPPLDTYASDAKTLVGYDPDLAQLVADGLG---LKLKLVPLAWADWPLA 122

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS---SVSQLSGASI 148
           + S ++D +  N   T  R+      F      D  GF +     I        ++G  I
Sbjct: 123 VASGKVDAVLSNVTVTEERKE--KFDFS-TYRRDVLGFYVPNGSRIQAIRDRRDVAGLRI 179

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              +GT  E  L  + K +  +       I F+ V        A R DA     + L   
Sbjct: 180 ITDSGTNQEKILLAWDKQNVAQGLKPVQVIYFDDVAARYLGLVAGRADAIFSVNATLAYQ 239

Query: 205 KLTNDR 210
           +     
Sbjct: 240 QSRTHD 245


>gi|197119046|ref|YP_002139473.1| PBPb, PAS/Hist_Kin_Sens domain-containing sensor histidine kinase
           response regulator [Geobacter bemidjiensis Bem]
 gi|197088406|gb|ACH39677.1| sensor histidine kinase response regulator, PBPb, PAS and
           Hist_Kin_Sens domain-containing protein [Geobacter
           bemidjiensis Bem]
          Length = 1047

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 55/195 (28%), Gaps = 19/195 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     IL   +L   S ++ A +         L  G       F+    +    GF 
Sbjct: 1   MLKRL---ILFACLLASVSTASAADLFQK-----TLVVGSEENFPPFSIGSTDDTAGGFA 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + ++                  E     +  ++D+L          E      F  
Sbjct: 53  VELWKEVAREAGLKY---TMRVRPWGELLQDFRDGKVDVLINIAT---SDERHRYTDFSV 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     +      ISS + L+G SI V           +Y  +   +   ++ +  
Sbjct: 107 PHVTVNGAIFVRTGDSSISSEADLAGKSIIVFKS----DLAHEYAVSKGWQKQLVLVDDA 162

Query: 180 EEIDAAYRAHRCDAY 194
            E      + + DA 
Sbjct: 163 REGLRLLSSGKHDAM 177


>gi|253690236|ref|YP_003019426.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756814|gb|ACT14890.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 289

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 75/243 (30%), Gaps = 38/243 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     + C + +  T  ++  +   + KK   ++         +   K +G   G +
Sbjct: 1   MIKSKLTLLACSLCMAGTLAASFTASAEE-KKWTTVRIATEGAYHPYNFTKPDGTLDGME 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + L + +     K + +         AL + + D +      T  R     + F  
Sbjct: 60  IELYKVLCNNM---QVKCEIMVQPFTSTIPALNAGKFDAIISGMSATEKR--REVIDFSQ 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------------------------LSGASICVQAGT 154
                GQ F + K   ++                              L G +I VQ+ +
Sbjct: 115 PYTQAGQTFAVLKSSKLAKEFPDAGQRFSINPADEATAKAEIEKLKPLLEGKTIGVQSAS 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L  Y K          ++  +E D   +A R D           LK  +++P   
Sbjct: 175 IASAFLDKYMK---GVMKVREYKTTQEHDLDLKAGRVDLVIASAP---YLKSISEKPGNA 228

Query: 215 VIL 217
            I+
Sbjct: 229 DIV 231


>gi|238922203|ref|YP_002935717.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
 gi|238873875|gb|ACR73583.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
          Length = 263

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 10/203 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  V  +G+  G DV+        +       +++ ++ +++   L  
Sbjct: 29  EIVIG-SDNYPPYNYVDTDGNATGIDVELATEAFKRMGYKA---RFIYIDWEDKKNLLAD 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           + ID    +      RE               Q   ++ +  I S+  L G +I VQ  T
Sbjct: 85  RTIDCAWGSFSM-DGRENEYRW--AGPYMTSRQVVAVNMESDIYSLEDLEGKTIAVQTTT 141

Query: 155 TTELT-LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             E   L+   +        I  ++ E I         DA     +     +   D   +
Sbjct: 142 RPEKIFLSKTDERIPAIRSLIALQKRELIYPFLSKGYADALAAHET--AIRQYMEDYNIK 199

Query: 214 HVILPDIISKSPLAPAIIQGDTE 236
             IL + +    L  A  + D  
Sbjct: 200 FRILDEPLETVGLGVAFDKNDDR 222


>gi|148252816|ref|YP_001237401.1| hypothetical protein BBta_1255 [Bradyrhizobium sp. BTAi1]
 gi|146404989|gb|ABQ33495.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 273

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 77/235 (32%), Gaps = 15/235 (6%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           +     + S   S    I++   L+  GI      + +  A G W GF V     L+ A+
Sbjct: 15  VASPALAQSQPESTFAQIRRTKKLRIAGIVGTEPYYHKDIATGQWSGFCVSMATELAKAM 74

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
               ++++ +        L LQ+ +ID +      T  R  +L + F      +    I 
Sbjct: 75  ---EAEVEIIESTWGNSVLDLQANKID-IMFGLSPTPSR--ALIVEFTRPIMNNTFTIIA 128

Query: 132 HKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
                  S   L+     + V  G+T +L               +  +  +E   A ++ 
Sbjct: 129 KSGFEPKSWDDLNKPEVKVAVDIGSTHDLYARRTLPKA----TLVALKSPDEAVLAVQSG 184

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-QGDTEWYNIVSW 243
           R D               N +    VI+P  ++  P    +    DT +   V  
Sbjct: 185 RADCLIQVAMLSLVTVKKNAK-VGKVIIPTPVAAQPTCCGVRVDSDTRFRTYVDN 238


>gi|298484747|ref|ZP_07002848.1| Cyclohexadienyl dehydratase, periplasmic precursor [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160716|gb|EFI01736.1| Cyclohexadienyl dehydratase, periplasmic precursor [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 278

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 17/234 (7%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCR 65
             ++C    F    +   + L  +K    L+ G+ +G   +      +G+W G       
Sbjct: 14  AVLVCCATAFPLIATAAENTLDKVKSAKVLRIGVASGDPWY-YKDPISGEWTG----VGF 68

Query: 66  ALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            +   I +D   K+  +         ALQ+ QID+     D T  R+ +L         +
Sbjct: 69  RVGEKIGEDLGIKVVPVETTYGNAPAALQANQIDVFF-VLDATEERKKALDFP-TQPLLW 126

Query: 125 DGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
             QG +        S   L      I V  GT T+  L               F   +E 
Sbjct: 127 YKQGVLAKDGLKADSWEDLNKPDVRIGVALGTATDRDLTKRLP----NAKIERFANTDET 182

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            AA+ A R DA+      L   +      +  +I+P+ + + P +  + + + +
Sbjct: 183 VAAFMAKRVDAFAFYHPVLAIAQSHIHTGN--LIVPEPVVEIPTSAGVRKEEDQ 234


>gi|239833822|ref|ZP_04682150.1| Octopine-binding periplasmic protein precursor [Ochrobactrum
           intermedium LMG 3301]
 gi|239821885|gb|EEQ93454.1| Octopine-binding periplasmic protein precursor [Ochrobactrum
           intermedium LMG 3301]
          Length = 283

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 81/276 (29%), Gaps = 41/276 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        + +  L  TS S +A    + KK   +          +   K +G   G++
Sbjct: 1   MKTIGLFKAVFISALALTSISAHA----EEKKWTKITIATEGAFRPYNFTKPDGSLDGYE 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+  + L + +  +      +         AL + + D +      T  RE +  ++F  
Sbjct: 57  VELYKDLCARMKVE---CTLVAQPFDSIIPALNAGKFDAIMAGLTATPKREET--ISFSI 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQ------------------------LSGASICVQAGTTT 156
                 Q F   K    + +                          + G ++ VQ+ +  
Sbjct: 112 SYGLTPQTFATLKDSPYAKLPHTGETLYLAKDEAAAQKAIDEVSAEIKGRTVGVQSASLG 171

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              L  YFK +        ++  E+ D   ++ R D     + A            + V+
Sbjct: 172 LSLLDKYFKDN---IDIREYKTTEQHDLDLKSGRVDLVVASL-AYLTDAAKKPGNEDIVM 227

Query: 217 LPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248
                    L       + + DTE   +      A 
Sbjct: 228 TGPFFKGGILGRGVAVGLRKDDTELKKMFDDAIEAA 263


>gi|227555893|ref|ZP_03985940.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|312901081|ref|ZP_07760370.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|227175060|gb|EEI56032.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|311291827|gb|EFQ70383.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315168140|gb|EFU12157.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315573554|gb|EFU85745.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315582098|gb|EFU94289.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 546

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 42  TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 102 ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 156

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     S+  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 157 GKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 212

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIIS-----KSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 213 DGYVSERPEGITATSVNKELKMLEFPKEKGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 271

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 272 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 313

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 314 GDMFLR--GAGLTLFIA 328


>gi|218673096|ref|ZP_03522765.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli GR56]
          Length = 136

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 11/139 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     V  + +++   +     A      ++R  ++  +      F  + AN   +GFD
Sbjct: 1   MRGALMVGGVDVVLAAVSPLPVAA------QERMPMRVAVEGAFPPFNYLDANNKLQGFD 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D   AL         + Q++     +    L +++ D +  +   +L R     +AF  
Sbjct: 55  IDIANALCE---TGKFECQFIIEKWDDMIPDLVAEKYDAIISSMSMSLER--RQKVAFTE 109

Query: 121 ITYFDGQGFIMHKKKGISS 139
             Y     FI  K   I+ 
Sbjct: 110 KYYNSPSVFIARKDSPITD 128


>gi|312217760|emb|CBX97707.1| hypothetical protein [Leptosphaeria maculans]
          Length = 299

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 23/225 (10%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANG------------DWKGFDVDFCRALSSAIF 72
           SIL  I  RG+LK G       F+   AN              + G D+D  ++LS+++ 
Sbjct: 47  SILDKILARGYLKVGTTGDYKPFSYKVANQTALPATTPAINTTYIGADIDLAQSLSNSLG 106

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             P  ++++P         + + + D+       TL R  +  + F       G+   + 
Sbjct: 107 L-PRPVEFVPTIWANVTADIAASKFDVAMSGVSITLAR--AQKVFFSTAIQRVGKAACVR 163

Query: 133 KKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
                     +    +G  + V  G T E     + +A+      ++ +    +  A   
Sbjct: 164 CADLAKFSSLAAIDTAGVKVAVNPGGTNEA----FDRANLKTATIVLVQDNNAVYKAVMD 219

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              DA   DI  +      +      V      +   L   + + 
Sbjct: 220 GDADAMISDIIEVELQVRLHPGVLCIVNPNATFTFEELGYMVERD 264


>gi|145631227|ref|ZP_01787000.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           R3021]
 gi|144983154|gb|EDJ90649.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           R3021]
          Length = 188

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 58/175 (33%), Gaps = 13/175 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L   +      F    A G+  GFDVD   A+   I       ++          +L++
Sbjct: 11  ELTFAMEPSYPPFETTNAKGEIIGFDVDVANAICQEI---QVTCKFKSETFDSLIPSLKA 67

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D      D T  R     + F    Y     ++  K K     +     +I VQ GT
Sbjct: 68  KRFDAAISAIDITDARAK--QVLFSDAYYDSSASYVALKGKATLESA----KNIGVQNGT 121

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           T +       K    +Y P  +  ++      ++ R D   GD + L  +     
Sbjct: 122 TFQQYTVAETK----QYSPKSYASLQNAILDLKSGRIDIILGDTAVLSDMISKEP 172


>gi|89096760|ref|ZP_01169652.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Bacillus sp. NRRL B-14911]
 gi|89088775|gb|EAR67884.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Bacillus sp. NRRL B-14911]
          Length = 279

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 86/273 (31%), Gaps = 31/273 (11%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEV---KANG 54
           M K   F   +L  ++L     S+ +S            K G+  G   F       +NG
Sbjct: 1   MKKASLFLAGMLSAVLLLAGCGSSTSSGSDSGSSESDTFKVGLEAGYAPFNWTQKDDSNG 60

Query: 55  DWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
             K         G+DV+  + ++  +  +   ++ +         AL S +ID +     
Sbjct: 61  GVKIKGSAEYAGGYDVEIAKKIADGLGKE---LEIVKTEWDGLVPALTSGKIDAIIAGMS 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLAD 162
            T  R+ +  + F    Y      ++    K +  +S++  +GA I  Q  T     +  
Sbjct: 118 PTAERKET--IDFSENYYNSQLVMVVKKGGKYENATSLNDFNGAKITAQLNTFHYSVIDQ 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
                         +    +  A  +   D Y  +     +    ND  +         +
Sbjct: 176 IDGVSKET----AMDNFPAMRVALESGIIDGYVSERPEAVSASAANDNFAMVDFEEGFET 231

Query: 223 KS---PLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                 +A  + +G +E    ++     +   E
Sbjct: 232 SEDDTAIAVGLEKG-SELTEKINEILKGISEEE 263


>gi|329577432|gb|EGG58881.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 546

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 100/342 (29%), Gaps = 52/342 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K  F   L L+ LF     T        ++ G  + G+  G   F       A+G   
Sbjct: 20  MNKKVFSFSLLLVTLFSLLGVT---TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVP 76

Query: 57  -------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                   G+DV   + ++  +      +  +         ALQS +ID +      T  
Sbjct: 77  IQGNSYAGGYDVQISKKIADGLGRK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAE 133

Query: 110 REISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           R+  +   F    Y      I+    K     S+  L+ A I  Q  T     +      
Sbjct: 134 RKKEIA--FTNPYYESQFVVIVKKDGKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNV 191

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----II 221
           +  +      +    +  A  +   D Y  +          N          +       
Sbjct: 192 NKQQ----AMDNFSAMRTALASGMIDGYVSERPEGITATSVNKELKMLEFPKENGFDASA 247

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
             S +A  + +GD +    V+     +   E   I  + I      T + + +       
Sbjct: 248 EDSQVAVGMRKGDPDIEK-VNKILAGISQDERTKILDQAIKDQPAATDSDEQKT------ 300

Query: 282 SSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
                   GL  D+   I      YG+MF R  G    L I 
Sbjct: 301 --------GLINDF-KNIWNQ---YGDMFLR--GAGLTLFIA 328


>gi|33592598|ref|NP_880242.1| putative extracellular solute-binding protein [Bordetella pertussis
           Tohama I]
 gi|33572244|emb|CAE41796.1| putative extracellular solute-binding protein [Bordetella pertussis
           Tohama I]
          Length = 306

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 83/283 (29%), Gaps = 33/283 (11%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTG 43
           M +  FV   +L +      + S + S                L   K  G ++ G    
Sbjct: 3   MRRFNFVKWGLLMVGAGLLAACSDSDSSDPGAAQQPAAQSASTLDAAKAAGKIRIGY-AN 61

Query: 44  LVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
              +A + +      G  V+  R +   +  D   ++ +          LQ+K+ DI++ 
Sbjct: 62  EAPYAYMDSKEARVTGESVEIARVVLKRMGIDE--VEGVLTEFGSLIPGLQAKRFDIIAA 119

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               T  R     +AF   TY  GQ F++ K    +  S    A             +  
Sbjct: 120 GMYVTPER--CQQVAFSDPTYGVGQAFLVQKGNPKNLHSYADVAKNGEAKLGVVVGAIEA 177

Query: 163 YFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGD--------ISALYALKLTNDRPS 212
            +           +VF       +   A R DAY                  KL    P 
Sbjct: 178 EYATKQEIPAGQVVVFPDAVSALSGIEAGRADAYAATTLTVNDLMHKTSAGDKLEKADPF 237

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               +     +   A A  + D  + +  +      V +++  
Sbjct: 238 TDPTVDGKSVRGYGAFAFRKDDQAFADAFNAELKKFVGSDKHR 280


>gi|282891257|ref|ZP_06299759.1| hypothetical protein pah_c050o025 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498754|gb|EFB41071.1| hypothetical protein pah_c050o025 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 266

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 73/247 (29%), Gaps = 14/247 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K FF   + L     T  +            G LK G +     F     N    G +VD
Sbjct: 2   KLFFSICVALSAYLCTGLNALEKASYSTITPGVLKIGSSFSNPPF----INRQKAGLEVD 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+   +     + +++     +    L ++Q D+++              + F    
Sbjct: 58  LLNAICKQL---KLRCEWVEAAPNQIMEGLDNQQYDLIADGLVM--EEGHQQVIDFSIPY 112

Query: 123 YFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
                  ++   K   I SV +L G S+ V + T  E           + K     F  +
Sbjct: 113 LVTHLSLVVSKLKNSSIKSVQELRGKSVGVLSRTAEEEGARQLLNDRQIGKMVIYPFGDM 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E        + DA+       Y L            LP  I K  +A    + + E+  
Sbjct: 173 NEALKDLEKGQIDAFLLLYPHAYLLVKEKGSLKILGSLPKPIQK--MAFGFSKRNPEFLA 230

Query: 240 IVSWTHY 246
             +    
Sbjct: 231 AFNRALQ 237


>gi|311899980|dbj|BAJ32388.1| putative ABC transporter substrate-binding protein [Kitasatospora
           setae KM-6054]
          Length = 338

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 72/219 (32%), Gaps = 10/219 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G      G +       W GFDV   R++   +    +   +  + + ER   L 
Sbjct: 50  KSVRIGTKNNQPGTSTQNKEHVWSGFDVLVGRSVVRNLGRSSADAAFSDVISGEREAKLT 109

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
           +   D++      T  R  +  + F        QGF++   +        L G ++C   
Sbjct: 110 TDAEDLVVATYSITPER--TEKVFFAGPYAKTSQGFMVRADETWLGSLDALRGRTVCSWG 167

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GTT++  L   F+A    Y        +      R  R DA + D   LY L        
Sbjct: 168 GTTSDTELR--FQATVKGYTVASATDAQACLTELREKRVDAVSTDQLILYGL---ARNDP 222

Query: 213 EHVILPDIISKSP--LAPAIIQGDTEWYNIVSWTHYAMV 249
              ++P++    P      I +   E    +       V
Sbjct: 223 GLKVVPEVKIGVPNFYGIGIKKERIEDCLRIRDYLKDYV 261


>gi|302545139|ref|ZP_07297481.1| ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302462757|gb|EFL25850.1| ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB
           [Streptomyces himastatinicus ATCC 53653]
          Length = 304

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 82/249 (32%), Gaps = 16/249 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +  T      ++L  ++ +G ++ GI    + F  +  NGD+ G   +  + +   +  D
Sbjct: 39  VSSTDAKDGGNLLERLRAQGTVRLGIAGE-IPFGYIDKNGDFTGEAPEIAKVIFKRLGVD 97

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              +Q +P         L+S+Q D++S        R     + F    Y     FI+ K 
Sbjct: 98  K--VQPVPTEFGSLIPGLRSQQFDVVSAGMYINPER--CAQVIFSDPDYRMRDAFIVRKG 153

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRC 191
               + +   +      +  GT       DY K   +K    ++         A    R 
Sbjct: 154 NPKNLHNYDDIVKQKAKMATGTAYAEI--DYAKNAGVKESDMLILPDQLAGLLAVEQGRA 211

Query: 192 DAY--TGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTH 245
           D +  T         +  + R         ++   P       A    +T+  +  +   
Sbjct: 212 DVFAGTTVTVHNVVKQRNSKRAEATEPFQAMLDGKPDIGAGGFAFRPEETKLRDAFNVEL 271

Query: 246 YAMVTAEEL 254
           + M  + EL
Sbjct: 272 HKMKKSGEL 280


>gi|238911982|ref|ZP_04655819.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
          Length = 253

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 74/237 (31%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKIGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E     +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMTDLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|218660898|ref|ZP_03516828.1| extracellular solute-binding protein family 3 [Rhizobium etli
           IE4771]
          Length = 145

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 32/110 (29%), Gaps = 5/110 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK  G  K G       F     +G   GFDV+   A+++ +        +  
Sbjct: 20  AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FFE 76

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                    L +K+ D +      T  R+      F           I+ 
Sbjct: 77  GKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVR 124


>gi|222150111|ref|YP_002551068.1| ABC type amino acid transport system periplasmic component protein
           [Agrobacterium vitis S4]
 gi|221737093|gb|ACM38056.1| ABC type amino acid transport system periplasmic component protein
           [Agrobacterium vitis S4]
          Length = 265

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 69/253 (27%), Gaps = 18/253 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60
            +     +  L +  F + + +   LG       +             V    G   G++
Sbjct: 4   RRAILAGLSALFLAPFAATAADLPDLGG----KTVVVVTENAYPPLQFVDPKSGKAIGWE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +     K++Y   +      A+   Q +     T  T+  +    + F  
Sbjct: 60  YDAMNEIAKRL---NVKVEYQNTSWDAMIQAVSDGQYN--IGMTGITIKEDRKEKVDFSD 114

Query: 121 ITYFDGQGFIMHK----KKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIV 175
                 Q  ++           S        I  Q GT+     + +    +       +
Sbjct: 115 PYMRSQQLMLVRSDEARFTDAKSFKAFEKGLIAAQPGTSPFYTAVYEVLDGNEQNPRIKL 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE       A +    D    D +A       +       I+ + +          +G +
Sbjct: 175 FETFGATVQALKTGDVDLVLTDSTAGKGY--VDASGGALKIIGEPLGTEDFGFIFPKG-S 231

Query: 236 EWYNIVSWTHYAM 248
           +    V+    A+
Sbjct: 232 DLVKPVNAAIAAL 244


>gi|218659412|ref|ZP_03515342.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli IE4771]
          Length = 207

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 25/230 (10%)

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+D+D    ++  +      +    + +  R   LQ+ ++D++  +      RE    
Sbjct: 3   PMGYDIDVANLIAEKLGVKTELVP---VTSANRVPYLQTNKVDLVISSLGKNAEREKV-- 57

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G        ++    L+G SI V  G   +L L     A         
Sbjct: 58  IDFSVAYAPFFNGVFGPADLAVAKTEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKR 114

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +E      +A+ + + D          A+      P +   L  +I  SP    + +  +
Sbjct: 115 YEDNNGTISAFLSGQVDIIATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQS 172

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
                V+    A  T   L                   Q++LG D  +++
Sbjct: 173 ALLEKVNGIIAAAKTDGSLNAIS---------------QKWLGADLPADL 207


>gi|121608945|ref|YP_996752.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121553585|gb|ABM57734.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 276

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 72/228 (31%), Gaps = 15/228 (6%)

Query: 31  KKRGF-LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + +G  ++  + +           +G   GFD+D   AL++ +    S I++   +  + 
Sbjct: 29  RAKGAPIRAAVVSNYPPLEYKDPASGKLVGFDIDLGEALAARLG---STIKWEETSFDQM 85

Query: 89  FLALQSKQIDILSRNTD-WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
             +L + ++DI+          R+    + +           +  +    +S   L G  
Sbjct: 86  MSSLATGRVDIILSGMTDIPARRDAVRFIDYLKTGPQFY--VLGARATEFASTEALCGKK 143

Query: 148 ICVQAGTTTELTLADYFKAH----NMKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALY 202
           +     T+    +A +  AH          +       +     R  R DA       L 
Sbjct: 144 VGASRRTSFLAEIAKWSDAHCVKAGKPAIIVAGTDGSADARTQLRQGRLDAAVQGGETLN 203

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +         + ++    +   +  AI + D      ++     ++ 
Sbjct: 204 YIFGQEPN--TYALVGKPFAFQYVGLAIGRKDEALSTELAGAMDQLIA 249


>gi|227520033|ref|ZP_03950082.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229546924|ref|ZP_04435649.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229550512|ref|ZP_04439237.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293382718|ref|ZP_06628643.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|293388099|ref|ZP_06632627.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|307268500|ref|ZP_07549875.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307276436|ref|ZP_07557559.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307286974|ref|ZP_07567049.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312908613|ref|ZP_07767555.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312909239|ref|ZP_07768096.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312952647|ref|ZP_07771511.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|227072581|gb|EEI10544.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229304369|gb|EEN70365.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229307852|gb|EEN73839.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|291079878|gb|EFE17242.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|291082550|gb|EFE19513.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|306501920|gb|EFM71209.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306506916|gb|EFM76063.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306515161|gb|EFM83701.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625400|gb|EFQ08683.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310629435|gb|EFQ12718.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|311290481|gb|EFQ69037.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|315026795|gb|EFT38727.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315032967|gb|EFT44899.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315147131|gb|EFT91147.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315153569|gb|EFT97585.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315156251|gb|EFU00268.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315158604|gb|EFU02621.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315165862|gb|EFU09879.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315171420|gb|EFU15437.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315172654|gb|EFU16671.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|327534044|gb|AEA92878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 546

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 42  TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 102 ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 156

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     S+  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 157 GKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 212

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 213 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 271

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 272 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 313

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 314 GDMFLR--GAGLTLFIA 328


>gi|218459979|ref|ZP_03500070.1| extracellular solute-binding protein family 3 [Rhizobium etli Kim
           5]
          Length = 214

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 32  KRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           + G    GI+    L        +    G+DVD  +A++ ++     K+  + +   +  
Sbjct: 4   ENGVFTVGISSSGNLPLHDYASDSKTVIGYDVDLAQAIADSLG---LKLNLVSVAWADWP 60

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGA 146
           L L S + D +  N   T  R+      F      D  GF +  +  I+S      ++G 
Sbjct: 61  LGLTSGKFDAVISNVTVTEERK--QKFDFS-TYRKDELGFYVRAENPITSIKAPKDIAGL 117

Query: 147 SICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALY 202
            +   AGT  E  L ++ + +    +K   + +   + +   A ++ R DA     +   
Sbjct: 118 KVITDAGTNQEKILLEWDRQNVAAGLKPIEVQYYDDDAVKDLAVQSGRADAVFSVNATQA 177

Query: 203 ALK 205
              
Sbjct: 178 YAA 180


>gi|16760254|ref|NP_455871.1| periplasmic amino acid-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141978|ref|NP_805320.1| periplasmic amino acid-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|289825678|ref|ZP_06544849.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25513339|pir||AI0665 probable periplasmic amino acid-binding protein STY1438 [imported]
           - Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502549|emb|CAD01698.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29137607|gb|AAO69169.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 253

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 74/237 (31%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKIGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E     +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMTDLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|257063100|ref|YP_003142772.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Slackia heliotrinireducens DSM
           20476]
 gi|256790753|gb|ACV21423.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Slackia heliotrinireducens DSM
           20476]
          Length = 273

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 9/217 (4%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K      F  +L +  L   S  ++ +     ++   +   +      +  V  NGD 
Sbjct: 1   MVKKVASVVFAGMLAVAALAGCSGGSDQAGDASSEEVRTMTIAVGNAYSPYVYVDENGDA 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDV+  +A+  A+     +  Y  ++ K   L++++ +  + S    W   R      
Sbjct: 61  AGFDVEVLKAIDEAL--PQYEFTYETMDFKNILLSVETGKAQLGSHQFSWNEERAQKYLY 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA---HNMKYHP 173
              P  Y             I S+  + G  + ++ G  +E  + ++ +A   + M  + 
Sbjct: 119 PETPFCYGTMYLVAGADNDAIQSIDDMGGKIVTLETGDASEAQINEWNEAHPDNPMTINW 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           I     EEI A     R DA+    S +  +      
Sbjct: 179 IDAPTPEEISAMISTGRTDAFCEMRSYVDDVNAEYGN 215


>gi|209516859|ref|ZP_03265709.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209502675|gb|EEA02681.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 309

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 88/253 (34%), Gaps = 21/253 (8%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            +  L  GI       +          GFD D  + ++ ++      +  + L   +  L
Sbjct: 58  AKDELTVGIVVAHPPISTYATDAKTVVGFDPDLAQLVADSLGRK---LNVVILAWPDWPL 114

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           AL S ++D +  N   T  R+      F      D  GF +     I S      ++G  
Sbjct: 115 ALASGKVDAVISNVTVTEERKA--RFDFS-TYRRDEVGFFVKTDSPIKSIKEPKDVAGLR 171

Query: 148 ICVQAGTTTELTLADYFK---AHNMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYA 203
           +   AGT  E  L ++ K   AH +K   + +   + + + A ++ R DA     +AL  
Sbjct: 172 VITDAGTNQEKILLEWDKQNVAHGLKPIEVQYYDDDAVKSVALQSGRADAIFSVNAALLY 231

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA-------EELGI 256
              T+ +  +   +     ++       +  +     V+     ++         E   +
Sbjct: 232 DAATHGKTRQVGTVSGGWPRTAEVAVTTRRGSGLAAPVTIALNDLIGKGQYRAVLERWNL 291

Query: 257 TQKNINQVSKDTT 269
             + I++ + +  
Sbjct: 292 GSEAIDKAATNPP 304


>gi|29374889|ref|NP_814042.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|29342347|gb|AAO80113.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
          Length = 527

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 100/342 (29%), Gaps = 52/342 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K  F   L L+ LF     T        ++ G  + G+  G   F       A+G   
Sbjct: 1   MNKKVFSFSLLLVTLFSLLGMT---TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVP 57

Query: 57  -------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                   G+DV   + ++  +      +  +         ALQS +ID +      T  
Sbjct: 58  IQGNSYAGGYDVQISKKIADGLGRK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAE 114

Query: 110 REISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           R+  +   F    Y      I+    K     S+  L+ A I  Q  T     +      
Sbjct: 115 RKKEIA--FTNPYYESQFVVIVKKDGKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNV 172

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS---- 222
           +  +      +    +  A  +   D Y  +          N          +       
Sbjct: 173 NKQQ----AMDNFSAMRTALASGMIDGYVSERPEGITATSVNKELKMLEFPKEKGFDASA 228

Query: 223 -KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
             S +A  + +GD +    V+     +   E   I  + I      T + + +       
Sbjct: 229 EDSQVAVGMRKGDPDIEK-VNKILAGISQDERTKIMDQAIKDQPAATDSDEQKT------ 281

Query: 282 SSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
                   GL  D+   I      YG+MF R  G    L I 
Sbjct: 282 --------GLINDF-KNIWNQ---YGDMFLR--GAGLTLFIA 309


>gi|296387080|ref|ZP_06876579.1| hypothetical protein PaerPAb_03054 [Pseudomonas aeruginosa PAb1]
          Length = 1245

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 82/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V +LCL   +            +   + +   ++ G++T    F      G ++
Sbjct: 1   MQRLQAVLLLCLACCWPGLAGALTLTPEERAWLAEHPSIRLGVDTSWPPFEFRDEQGRYQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G    +   L   +      +   P+  K     L+  +   L          E    L+
Sbjct: 61  GLAAGYVGLLQERLG-----VSLTPVEPKTWTQVLEQAKDGRLDLLPGIMATPERQEYLS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +  K   +      L G  + V         L     A +     +  
Sbjct: 116 FTRPYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             V     A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G  
Sbjct: 172 PSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
               I+     A ++AEE+   Q 
Sbjct: 230 ILAGIIDKVL-ADLSAEEIERLQA 252


>gi|297539270|ref|YP_003675039.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Methylotenera sp. 301]
 gi|297258617|gb|ADI30462.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Methylotenera sp. 301]
          Length = 1036

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 24/259 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKK--------RGFLKCGINTGLVGF 47
           M K     ++ LI+  F +    A          ++K        +  L  G       F
Sbjct: 25  MCKKMLRFLMALILSLFVNSIAYALIQNLPTSFKVQKPLPVNQLQKATLIVGSEQDFPPF 84

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           A   ++    GF V+  +A++S    +        L   +     +S +ID+L       
Sbjct: 85  ATGMSDESAGGFTVELWKAVASEAGLNY---HIRVLPFHQLLDEFKSGKIDVLIN---LN 138

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           +  E  +   F         G  +      I+S   L G SI +          A+Y  +
Sbjct: 139 VTDEAHVYADFSVPHSVFNGGIFVRNNESNINSEVDLKGKSIIMMKDDVE----ANYATS 194

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  +  E   E      +   DA   +         +    +   +          
Sbjct: 195 RGWNNQLVFVEAAAEGMQMLASGSHDAMLINKVVGLQTLHSLKLDNIKALKAKAGFTQRF 254

Query: 227 APAIIQGDTEWYNIVSWTH 245
           A A+  G +E    +    
Sbjct: 255 AFAVHTGQSELLGKIDEGL 273


>gi|189426666|ref|YP_001953843.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter lovleyi SZ]
 gi|189422925|gb|ACD97323.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter lovleyi SZ]
          Length = 620

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 84/258 (32%), Gaps = 18/258 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       I+ +            +   +      +  G N+    +  +  NG   G+ 
Sbjct: 50  MLNRICFLIIIISFFGGLPLHAEQATPDN---AHVIVVGGNSNYPPYQFIGKNGQPDGYI 106

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++        KI     +       L++ +IDIL     ++  R       F P
Sbjct: 107 VDLTKAIA---GVMGMKIDIRLGDFGGILDELENGRIDIL-EGLSYSESRAQH--YDFSP 160

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                       K    + ++ +L G  + V  G      + ++  AH      ++ +  
Sbjct: 161 PHSIIVHAIFARKGTKEVKTLDELRGKKVLVHRGGGMHSYMKEHNYAH----DLVLTDSP 216

Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEW 237
            E        +CD A    +  +Y ++   +  +  V +  +II +     A+ +G+TE 
Sbjct: 217 RETLQQLAVGKCDYAVVALLPGMYIIR--EENLTNIVPIAKNIIQQRYYCYAVKKGNTEL 274

Query: 238 YNIVSWTHYAMVTAEELG 255
               +     +    +  
Sbjct: 275 LARFNEGLTILKKTGQYD 292


>gi|227512391|ref|ZP_03942440.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus buchneri ATCC 11577]
 gi|227522633|ref|ZP_03952682.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus hilgardii ATCC 8290]
 gi|227084364|gb|EEI19676.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus buchneri ATCC 11577]
 gi|227090213|gb|EEI25525.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus hilgardii ATCC 8290]
          Length = 281

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 79/245 (32%), Gaps = 15/245 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64
            +  + ++++  T    + S          L C  +  L   +     +    GFDV+  
Sbjct: 11  LLGAIGIVLILLTGCGKSNSSSNSKGP---LICATSGTLYPSSFHNEKDNKLTGFDVEIV 67

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA++  +      +++  +N   +  A+++ + DI + +   +  RE    L+      F
Sbjct: 68  RAVAKKMGRK---VEFKEMNVDGQLTAVKTGKADIAANDFSVSPAREKQFALSTPYKHSF 124

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           +          GI S + + G     +AGT+    LA    A  + Y  +     +    
Sbjct: 125 NSLIVRQKDDSGIHSWADIKGKRAAGEAGTSY-QRLAKQLGAKPVNYDNV---SNDIYMK 180

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS----EHVILPDIISKSPLAPAIIQGDTEWYNI 240
             +  + D    D                    ++              + +G+T+    
Sbjct: 181 DVKNGKTDLIMNDYYLQKLALAAVPNNGLKILSNMYFKTNEDGKGTGIIMKKGNTKLQKQ 240

Query: 241 VSWTH 245
           ++   
Sbjct: 241 INKAL 245


>gi|168230053|ref|ZP_02655111.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194470057|ref|ZP_03076041.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194456421|gb|EDX45260.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335520|gb|EDZ22284.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 253

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 75/237 (31%), Gaps = 17/237 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKIGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             E  A  +    D    +    +  K     P E   +    +   L  A  +G  
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFK--NVDQLGIAFKKGSP 227


>gi|54296703|ref|YP_123072.1| hypothetical protein lpp0734 [Legionella pneumophila str. Paris]
 gi|53750488|emb|CAH11882.1| hypothetical protein lpp0734 [Legionella pneumophila str. Paris]
          Length = 250

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 78/249 (31%), Gaps = 23/249 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F   +L       +        +        L  G+      F     N +  G+D
Sbjct: 1   MK--FIQGLLLSFFFLVSPLHAQNEPIP-------LIVGVGGFYPPFIMQGTNNELFGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +     L   +     +  +  +  ++   AL +KQID+       T  R  S  + F  
Sbjct: 52  IATMTELCKIM---KRQCNFRVMRFRQLIPALINKQIDVAISAMSITSER--SNLVNFSM 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   F+ ++         L    G  I V+  T     +    +   +    + F+
Sbjct: 107 PYLLSYSRFLTNEVHNTHQPFNLMLLKGKRIGVEQNTVFSQEVR---RIGIIDPVIVEFD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
           R EE+  A  A++ D    D     AL  + +     +++   +     L  A+ + ++ 
Sbjct: 164 RTEEMLEALSANKIDFVLMDNP--AALYWSANSSGRLLVIGSPMLVGYGLGIAVNRENSV 221

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 222 LLKSLNDAL 230


>gi|257421538|ref|ZP_05598528.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294779326|ref|ZP_06744729.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|257163362|gb|EEU93322.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294453612|gb|EFG22011.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|323479461|gb|ADX78900.1| amino acid permease ABC transporter protein [Enterococcus faecalis
           62]
          Length = 527

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 100/342 (29%), Gaps = 52/342 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K  F   L L+ LF     T        ++ G  + G+  G   F       A+G   
Sbjct: 1   MNKKVFSFSLLLVTLFSLLGMT---TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVP 57

Query: 57  -------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                   G+DV   + ++  +      +  +         ALQS +ID +      T  
Sbjct: 58  IQGNSYAGGYDVQISKKIADGLGRK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAE 114

Query: 110 REISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           R+  +   F    Y      I+    K     S+  L+ A I  Q  T     +      
Sbjct: 115 RKKEIA--FTNPYYESQFVVIVKKDGKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNV 172

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----II 221
           +  +      +    +  A  +   D Y  +          N          +       
Sbjct: 173 NKQQ----AMDNFSAMRTALASGMIDGYVSERPEGITATSVNKELKMLEFPKENGFDASA 228

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
             S +A  + +GD +    V+     +   E   I  + I      T + + +       
Sbjct: 229 EDSQVAVGMRKGDPDIEK-VNKILAGISQDERTKIMDQAIKDQPAATDSDEQKT------ 281

Query: 282 SSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
                   GL  D+   I      YG+MF R  G    L I 
Sbjct: 282 --------GLINDF-KNIWNQ---YGDMFLR--GAGLTLFIA 309


>gi|254820303|ref|ZP_05225304.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium intracellulare ATCC 13950]
          Length = 605

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +G      +   G + GFD    RA++  +     +++++  +       + 
Sbjct: 93  GVLTVGTLSGAPPHICITPTGQYSGFDNQLLRAIARKLG---LQVRFVGTDFAGLLAQVA 149

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152
           + + D+ S +   T  R  ++   F     F     ++     I   S L+    I V  
Sbjct: 150 THRFDVGSSSIKATAERRRTVA--FTNGYDFGYYSLVVPPGSAIKDFSNLTARQRIGVVQ 207

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ +     + A+ +  + DA+        +     D   
Sbjct: 208 GTVEESYVVDTL-----HLQPVKYPDFATVYASLKTRQIDAWVAPAGEAASTIQRGDPAV 262

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                         A A  + +    + ++    A++ 
Sbjct: 263 IVAHAFSNEGFVAYAVA--KDNKPLVDALNSGLDAVIA 298


>gi|197122135|ref|YP_002134086.1| histidine kinase [Anaeromyxobacter sp. K]
 gi|196171984|gb|ACG72957.1| histidine kinase [Anaeromyxobacter sp. K]
          Length = 560

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 70/206 (33%), Gaps = 12/206 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G +     +  +  +G   GF+V+  RA++  +     +++       E   AL +
Sbjct: 19  TVVVGGDRDYPPYEFLDRDGKPAGFNVELTRAIAEVMG---MRVEIRLGAWSEMRAALVA 75

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
            ++D L +   W+  R     + F P            K    ++S+  L G ++ V   
Sbjct: 76  GRLDAL-QGMSWSEQRAA--EVDFSPPHLVVNHAIFARKGTPAVASLEALRGHAVAVHR- 131

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
              +  + D   +  M    +  +   +      + + + Y    +      +   + + 
Sbjct: 132 ---DGIMDDQLTSLGMGDRLLRTDTPADALRLLASGQGE-YAVVAALPGTFIIRELKLTN 187

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYN 239
              +   ++      A+ +GD    +
Sbjct: 188 LDQVAHSVASQRYGYAVRKGDAALRS 213


>gi|91227647|ref|ZP_01261924.1| putative glycosylase [Vibrio alginolyticus 12G01]
 gi|91188426|gb|EAS74720.1| putative glycosylase [Vibrio alginolyticus 12G01]
          Length = 484

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 100/316 (31%), Gaps = 27/316 (8%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              + +C + +           L  IK++  L+  ++  L GF  +   G  KG   +  
Sbjct: 4   LLSASVCALQISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTPKGIGAELL 61

Query: 65  RALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
                 +        +Q +P+   +   AL++   D++  N   T  R+  +  +   +T
Sbjct: 62  AHFEKDLRKLKPKLNVQIIPVARDQLLPALENGSGDLVVANLTITDTRKQKVEFSSPILT 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKYHPIVFERV 179
                         ++ + QLSG  I V+A ++   +  TL        +    + F   
Sbjct: 122 DIQEWVVTNKSTPAMTKIEQLSGKEIWVRASSSYFESIQTLNKKLNKKGLPPVIVHFIEE 181

Query: 180 E----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                E+          A   D           D    H  +P I     +A A+ +   
Sbjct: 182 TLQDYELVGMLNNGYVKAIVLDSHKAKLWLKVMDDIRVHKKIP-IRKNGKIAWAMRENSP 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           +   +V+      +     G    N+           + R L   K + + +   L   +
Sbjct: 241 KLKAVVNK----FIQKSRSGTVLGNVIYGKYIDNTGWLNRALNPKKIAQLEK---LAALF 293

Query: 296 TYRIIRHMGNYGEMFD 311
           +         YGE +D
Sbjct: 294 SR--------YGEKYD 301


>gi|330860378|emb|CBX70688.1| arginine-binding periplasmic protein 1 [Yersinia enterocolitica
           W22703]
          Length = 163

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 6/125 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  + AN   +GFD+D   AL   +    ++  +          +L+ 
Sbjct: 22  TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEM---QAECTFTNQAFDSLIPSLKF 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K+ D +    D T  R+  +   F    Y +   FI  K   ++ ++ L G  + +Q G+
Sbjct: 79  KRFDAVISGMDITPERQKQVA--FTQPYYENSALFIAEKG-KVADLAALKGKRVGMQNGS 135

Query: 155 TTELT 159
           T +  
Sbjct: 136 THQKI 140


>gi|294789307|ref|ZP_06754545.1| glutamine-binding protein / Glutamine transport system permease
           protein [Simonsiella muelleri ATCC 29453]
 gi|294482732|gb|EFG30421.1| glutamine-binding protein / Glutamine transport system permease
           protein [Simonsiella muelleri ATCC 29453]
          Length = 254

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 77/260 (29%), Gaps = 20/260 (7%)

Query: 1   MYKDFF-VSILCLIILFFTSFS----TNASILG-----DIKKRG-FLKCGINTGLVGF-A 48
           M + F   ++L L      + S                  +K G   +            
Sbjct: 1   MTRTFLKTTLLGLACAAVVACSDSKPAATDTTQNDASTAPQKTGKTYRVISEQVKPPLIT 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V   G   GF+ D  +A++     +         + +E   +L   + D+         
Sbjct: 61  YVD--GKPTGFEYDVLQAIAKKQGINLDYQTVN--SREELLTSLSENKADLALGAITIND 116

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             +    + F           ++ K     +S + L G  +  + GT  +    D   A 
Sbjct: 117 --DRKQQVDFSNPILDYSGTILVRKPLANATSWADLKGKKVASRHGTVYDKMALDNLSAP 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           + K + + +  V E   +   ++ +   GD   L      N       +      K    
Sbjct: 175 DGK-NIVYYNTVWEQVKSLINNQSEVVLGDSLILDYYVQQNGSNEVAFVHGITFPKESYG 233

Query: 228 PAIIQGDTEWYNIVSWTHYA 247
            AI +GDTE    ++    A
Sbjct: 234 FAIKKGDTELQQQINDGLAA 253


>gi|150391482|ref|YP_001321531.1| diguanylate cyclase and metal dependent phosphohydrolase
           [Alkaliphilus metalliredigens QYMF]
 gi|149951344|gb|ABR49872.1| diguanylate cyclase and metal dependent phosphohydrolase
           [Alkaliphilus metalliredigens QYMF]
          Length = 804

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 75/220 (34%), Gaps = 11/220 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     F+ +  +G   GF+V+  +A++  +  D   +++   N  E    L++ 
Sbjct: 32  IIFGDDIDYPPFSFLDESGYPTGFNVELGKAVAEVMGLD---VEFQLGNWHEIMQQLENN 88

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID +      ++ RE      F                  ++S+  L+G  + VQ    
Sbjct: 89  EIDAI-SGMFHSVDREAEYA--FTARHAVASGDIFTRDDFSVTSLEDLAGTRVVVQTN-- 143

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               + +     ++    I    V E      +   D Y   +       + +++ +   
Sbjct: 144 --DIVHESLVQEDLNIEFIEVSTVAEALRHVSSGEYD-YAAVLKLPAHYIIQHNKLTNLK 200

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                ++    + A+ + + +  + ++     +    +  
Sbjct: 201 SNGLSLAPQNYSMAVHKSNGQLLSDLNEGLVILKNTGQYQ 240


>gi|302873630|ref|YP_003842263.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|307688189|ref|ZP_07630635.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|302576487|gb|ADL50499.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
          Length = 277

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 6/226 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L  IK++G L          F ++     +  G D D    ++  +  +   I+    
Sbjct: 33  DRLETIKEKGVLTVVGPPEENPFFQINPETNEISGIDADIINEVARRLGVNKIDIK-EEA 91

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A         + ID+       +  RE  +   F    Y + +  I+ +   I+ +S L
Sbjct: 92  FANLLEKFNTDESIDVAIGGIFISPEREKLVA--FTKPLYKESEVVIVPRFSKINFMSDL 149

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
             A + V+ GT  E  L    K   +    I  E + E+  A ++ + DA   D   +  
Sbjct: 150 KNAVVGVERGTIFED-LTKKLKEDKLIKDVITVESITELFNAMKSGKIDAALADSIIISH 208

Query: 204 LKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                  PS   ++      +  +  A+ +GDT   N ++     M
Sbjct: 209 QLSKEKAPSLRTLIDYTPKLQGVIGMAVKKGDTSLLNAINKIINDM 254


>gi|327193428|gb|EGE60327.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CNPAF512]
          Length = 280

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 62/221 (28%), Gaps = 40/221 (18%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    S L  +I    + +              +          +     +G   GF++D
Sbjct: 5   KLLLTSALLGVISAGAAAAQTKPT--------EITIATEGAYEPWNFTGPDGKLAGFEID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L + +     K   +  +      +L +K+ D +  +   T  R     ++F    
Sbjct: 57  LANDLCARM---KVKCTIVAQDWDGLIPSLNAKKFDAIMASMIVTEKRLAV--ISFSKPY 111

Query: 123 YFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTTEL 158
                 F++ K   ++ +                          L G ++  Q  T   +
Sbjct: 112 APTAAAFMVEKTGPLADLPGTGTTVDLAADKAKVEQELQPLRDALKGKAVGAQVSTANAV 171

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            L  YFK           E+ +      +A R DA     +
Sbjct: 172 FLDTYFKGVVDPREYKTVEQHD---LDLQAGRIDAVVAQKT 209


>gi|209693642|ref|YP_002261570.1| putative amino acid ABC transporter,substrate-binding protein
           [Aliivibrio salmonicida LFI1238]
 gi|208007593|emb|CAQ77693.1| putative amino acid ABC transporter,substrate-binding protein
           [Aliivibrio salmonicida LFI1238]
          Length = 250

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 77/212 (36%), Gaps = 11/212 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K G++     F  VK +   +GF+VD    +      +  KI+Y+  +    F  L++
Sbjct: 26  EVKVGMSGRYFPFTFVKLD-KLQGFEVDLWDEIGRR---NDYKIEYVTASFSGLFGLLET 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
            +ID +S     T  RE      F      DG    + K    I  +  L+G ++ V  G
Sbjct: 82  GRIDTISNQITKTEAREA--KYLFADPYVVDGAQITVRKGNESIKGIEDLAGKTVAVDLG 139

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  L D  K++ +      ++   E        R DA+  D  +   L   +  P +
Sbjct: 140 SNFEKLLRDNDKSNQID--IKTYDTGIE--HDVALGRSDAFVMDRLSAAQLIKKSGLPLQ 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               P    ++       +   +    V+   
Sbjct: 196 LAGEPFETIENAWPFVKNEKGQKLQQEVNKAL 227


>gi|307700781|ref|ZP_07637806.1| bacterial extracellular solute-binding protein, family 3
           [Mobiluncus mulieris FB024-16]
 gi|307613776|gb|EFN93020.1| bacterial extracellular solute-binding protein, family 3
           [Mobiluncus mulieris FB024-16]
          Length = 314

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 79/238 (33%), Gaps = 21/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            D+K+R  L+ G +T       +K +G    G +VD  +A++  +               
Sbjct: 65  KDVKERDVLRNGASTDYAPLEMLKEDGTTPTGAEVDLTKAIALTMGLKDG------TTTT 118

Query: 87  ERFLALQSK---QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQ 142
           E F AL  K     DI +     T  R  +  +         G  F + K      +   
Sbjct: 119 ETFAALLPKVGSTYDIGASGFTVTAERIKTYDML---AFKNMGTLFAVKKGNPSGFNPDD 175

Query: 143 LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             GA++ VQ G+  E  +      +   A   +      + V  +     + + DA   D
Sbjct: 176 PCGATVGVQTGSYQEEDVLPRLNKECLAAGKPEIKIQKEDLVNMVIPKVISGQYDAVIAD 235

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                      +   +   +  I   +PLA  + + + +    V     +++ + +  
Sbjct: 236 DPVTAYNVKKAE--GQLETVGKIFDTTPLAIVVNKKNQDLSKAVKAAMDSLMKSGKFK 291


>gi|171778130|ref|ZP_02919387.1| hypothetical protein STRINF_00222 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283112|gb|EDT48536.1| hypothetical protein STRINF_00222 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 275

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 7/174 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +++  L ++     + +       KK   +K   ++    F     N  +KG+D
Sbjct: 1   MKKTNLLTVAFLAVVALVLSACSTQTQSGGKK--VIKVATDSDTAPFTYK-ENKAFKGYD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+         K++++          + + +  I + + ++   R  +    F  
Sbjct: 58  IDVVKAIFKD--SKEYKVEFVTTAFDSILTGVDADRYQIAANDFNYNEER--AQKYLFSD 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                       +     S+  LSG    V +G+     L  + K +  K    
Sbjct: 114 PISHSNYAITSAEGTSYDSLDDLSGKKTEVISGSNYAQVLEKWNKDNPDKEPIK 167


>gi|157370652|ref|YP_001478641.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157322416|gb|ABV41513.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 308

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 16/251 (6%)

Query: 34  GFLKCGIN--TGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L   ++       F    + N    G + D  R ++  +     K++ +P + ++  L
Sbjct: 57  GTLTVAVSILGSGPPFGLYARDNKTVIGSESDIARLVADGLG---LKLKLVPTSWEDWPL 113

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
            + S + D    N   T  RE      F      D  GF +    K   I S   ++G  
Sbjct: 114 GVTSGKYDAAIYNITVT--RERKTKFDFA-TYRQDTLGFYVKTGSKITSIKSAPDIAGKK 170

Query: 148 ICVQAGTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L  + K +  K      PI          A ++ R DA  G   A   
Sbjct: 171 IIVDSGTNQEAVLLAWDKENQAKGLPALQPIYVTDKAAATLAIQSGRADATFGPNVAGAY 230

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
               N + +   I+P    +S      ++      + V  +  + +             +
Sbjct: 231 QAKLNGKTTLVGIVPGGWPRSANIAVTVKKGNGLVDAVQASLNSAIANGSYLKVLDRWAE 290

Query: 264 VSKDTTNPDVQ 274
             +   + ++ 
Sbjct: 291 SDEKIEHSEIN 301


>gi|86357763|ref|YP_469655.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CFN 42]
 gi|86281865|gb|ABC90928.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CFN 42]
          Length = 280

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 63/221 (28%), Gaps = 40/221 (18%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    S L  ++   T+ +              +          +     +G   GF++D
Sbjct: 5   KLLLTSALLGVMSAGTAAAQTKPT--------EITIATEGAYEPWNFTGPDGKLAGFEID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L + +     K   +  +      +L +K+ D +  +   T  R     ++F    
Sbjct: 57  LANDLCARM---KVKCTIVAQDWDGLIPSLTAKKFDAIMASMIVTEKRLAV--ISFSKPY 111

Query: 123 YFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTTEL 158
                 F++ K   ++ +                          L G ++  Q  T   +
Sbjct: 112 APTAAAFMVEKTGPLADLPGTGTTVDLAADKAKVEQELQPLRDALKGKAVGAQVSTANAV 171

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            L  YFK           E+ +      +A R DA     +
Sbjct: 172 FLDTYFKGVVDPREYKTVEQHD---LDLQAGRIDAVVAQKT 209


>gi|326332069|ref|ZP_08198354.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325950207|gb|EGD42262.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 373

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 58/193 (30%), Gaps = 16/193 (8%)

Query: 28  GDIKKRGFLKCG---INTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            +I  RG L+ G   +  G    A V  +     G + D  R +++     P        
Sbjct: 112 QEILDRGTLEIGQGALPAGFPPLAFVGTDNKTLTGAEPDLSRLIAAVFGLKPE---LNNA 168

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142
             +  F+ L +   D+   N   T  R+      F      D  GF              
Sbjct: 169 TWQNLFVGLDAGTSDVAISNVTDTEERK--QKYDFA-SYRQDNLGFATVGTSTWEFGGDY 225

Query: 143 --LSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             L G  + V +GT  E  L ++    KA   K     F        A  + + DAY G 
Sbjct: 226 RTLDGLKVAVGSGTNQEKILLEWQAKLKAEGKKLDVKYFPDNPATWTALESGQIDAYFGP 285

Query: 198 ISALYALKLTNDR 210
              +         
Sbjct: 286 NPGIAYQIAGTGD 298


>gi|257067438|ref|YP_003153693.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
 gi|256558256|gb|ACU84103.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
          Length = 348

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 67/230 (29%), Gaps = 14/230 (6%)

Query: 29  DIKKRGFLKCGIN-TGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +I   G L+ GIN T     + +   N  + G ++D  R ++  +     + +      +
Sbjct: 96  EIADSGVLRVGINGTSSAPLSFLADDNQTYIGSEIDIARIVADKLG---LEFELKLTTWE 152

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLS 144
              L L++ + D +  N      R       F          F++ +           LS
Sbjct: 153 NWPLKLEAGEFDAVHANIGVNAER--LEKFDFA-SYRAAYMSFLVKEGAEFWLEDPDSLS 209

Query: 145 GASICVQAGTTTELTLADYF----KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           G  I V   T  E  L D+                +    +   A  + R D Y    ++
Sbjct: 210 GRLIAVGNATNQERILLDWNAELEAEGKEPAQLKNYSTDADTLLALGSGRIDGYLSPFAS 269

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           L  +    D       +        L        +      +    A++ 
Sbjct: 270 LSFIAARRDDFELQGRINAGWPDETLVAGTFARGSGLAEPYAAALNALIA 319


>gi|297162209|gb|ADI11921.1| putative ABC transporter substrate-binding protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 327

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 71/236 (30%), Gaps = 15/236 (6%)

Query: 23  NASILGDIKKRGFL-KCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQY 80
            A +  +I+KRG L     +           +     G + D    ++  +   P     
Sbjct: 64  AAQVPAEIRKRGTLEIVDSSDSAAPLTFYATDNKTVIGVEPDLAYLVADVLGLKP---HL 120

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138
             ++ +  F+ L S + D+   N   T  R+      F      D   F   K     ++
Sbjct: 121 NTVSWENIFVGLDSGKYDVGFSNITDTEERKE--KYDFA-SYRKDDLAFETKKNSGLKVT 177

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCDAY 194
               ++G ++ V  GT  E  L ++   +            ++   +   A  + R D +
Sbjct: 178 GPKDVAGKTVAVDTGTNQEKLLVEWSAENVKAGREPVKIKYYQNQSDTYLALASGRIDLF 237

Query: 195 TGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            G          +  +            +   L  A  + D      V+     ++
Sbjct: 238 LGPNPTAAYHVASAGQTEIVGTYSGAGATLQGLIAATTKKDNGLVKAVNSALNEII 293


>gi|238852979|ref|ZP_04643378.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|282852417|ref|ZP_06261759.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111395|ref|ZP_07712792.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus gasseri MV-22]
 gi|238834429|gb|EEQ26667.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|282556159|gb|EFB61779.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066549|gb|EFQ46889.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus gasseri MV-22]
          Length = 537

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 84/297 (28%), Gaps = 35/297 (11%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW---------KGFDVDFCRA 66
            FS+N+S     KK   LK G+      +       ANG            G+DV   + 
Sbjct: 21  GFSSNSSQTEAAKKEAPLKIGMEANYPPYNWTQTTDANGAVPIDGSKQYANGYDVQIAKI 80

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +     K+            AL S +ID++      T  R     + F        
Sbjct: 81  IGKKL---HRKVVVEKTEWDGLLPALTSGKIDLIIAGMSPTAERRK--AINFSVPYRKST 135

Query: 127 QGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              I     K      ++   GA +  Q GT     +     A               + 
Sbjct: 136 FVVITSKTGKFAQAKGLNDFKGAKLTAQQGTLHYDLIKQLHGAKREP----AMRSFSAMR 191

Query: 184 AAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            + ++   D Y  +     + K  N        ++          S  +  + +G+TE  
Sbjct: 192 QSLQSGTIDGYVAEDIEYQSYKAVNPNIVAVNLNKMQGFKVDHDDSITSIGVKKGNTELL 251

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP------DVQRFLGIDKSSNIGEAL 289
           N V+     +   +   +    + +  +   +        +    G      +G  L
Sbjct: 252 NQVNSILNGISKKKRDQLMADAVKEQPQAGGSKKENWFMSIMHRYGSMILGGVGMTL 308


>gi|116628764|ref|YP_813936.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri ATCC 33323]
 gi|116094346|gb|ABJ59498.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus gasseri ATCC 33323]
          Length = 537

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 84/297 (28%), Gaps = 35/297 (11%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW---------KGFDVDFCRA 66
            FS+N+S     KK   LK G+      +       ANG            G+DV   + 
Sbjct: 21  GFSSNSSQTEAAKKEAPLKIGMEANYPPYNWTQTTDANGAVPIDGSKQYANGYDVQIAKI 80

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +     K+            AL S +ID++      T  R     + F        
Sbjct: 81  IGKKL---HRKVVVEKTEWDGLLPALTSGKIDLIIAGMSPTAERRK--AINFSVPYRKST 135

Query: 127 QGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              I     K      ++   GA +  Q GT     +     A               + 
Sbjct: 136 FVVITSKTGKFAQAKGLNDFKGAKLTAQQGTLHYDLIKQLHGAKREP----AMRSFSAMR 191

Query: 184 AAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            + ++   D Y  +     + K  N        ++          S  +  + +G+TE  
Sbjct: 192 QSLQSGTIDGYVAEDIEYQSYKAVNPNIVAVNLNKMQGFKVDHDDSITSIGVKKGNTELL 251

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP------DVQRFLGIDKSSNIGEAL 289
           N V+     +   +   +    + +  +   +        +    G      +G  L
Sbjct: 252 NQVNSILNGISKKKRDQLMADAVKEQPQAGGSKKENWFMSIMHRYGSMILGGVGMTL 308


>gi|260889042|ref|ZP_05900305.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Leptotrichia hofstadii F0254]
 gi|260861102|gb|EEX75602.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Leptotrichia hofstadii F0254]
          Length = 521

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 93/300 (31%), Gaps = 45/300 (15%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANG 54
           M     K+  + +L     F T +S       DIK       G+  G   F      A  
Sbjct: 1   MKFSTIKNKILILLIFAATFITGYS------DDIK------VGMECGYAPFNWFQNDAKN 48

Query: 55  DWK--------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                      G+DV+  + ++  +  + + +            AL S ++D++      
Sbjct: 49  GAVKVDGGYCGGYDVEIAKVIAKKL--NKNLVIVKTKWEALLGPALTSGKVDLVIAGMSA 106

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADY 163
           T  R     L F    Y      ++ K        S++  +GA I  Q  T     +   
Sbjct: 107 TPER--RQSLTFSKPYYESDLVVVVKKNGKYANAKSINDFTGAKITGQLNTLHYDVIDQM 164

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPD 219
                        E    +  A  + + D Y  +     A + +N        +      
Sbjct: 165 KGVQKQT----AMESFPAMIVALNSGKIDGYISERPGAMAAQFSNPNLKFISFDKNTGFK 220

Query: 220 IISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
             ++   +A  +  G+TE    ++      +T     + Q+ + +  ++  N   + F G
Sbjct: 221 YDTEEVNVAIGMKLGNTELEEKINKILDENLT---PKVRQRIMEKSIQNQPNEASRSFFG 277


>gi|187939709|gb|ACD38851.1| hypothetical ABC transporter protein [Pseudomonas aeruginosa]
          Length = 310

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 77/229 (33%), Gaps = 21/229 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            +   V    L IL   + S  A   S+  +++K G L+CG             +G + G
Sbjct: 39  IRHLLVCAGALGILLGHAPSQAADDASLWQNVQKAGVLRCGAAVAAPYVMRNAGSGQYSG 98

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +  D CR     +     +++++  N       LQS + D+           E +L ++F
Sbjct: 99  YFADLCRNFGEKVLK--VRVEFVDTNWDNLVAGLQSGKWDL---AMALNQTPERALAVSF 153

Query: 119 RPITYFDGQGFIMHKKKGISS-------VSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                      +++K+    S            G +  V +GT  +  +++  +    + 
Sbjct: 154 SAPATDYQVSLVVNKENPKFSGAGNAIADYDKPGVTFAVMSGTAQDKAISNVVR----QG 209

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
             +    ++E   A  + R D         +    T        +LP  
Sbjct: 210 RVMRLPGMDETRLALMSRRADVLVDASDTNH--LYTLANAWAKEVLPRP 256


>gi|307609476|emb|CBW98970.1| hypothetical protein LPW_07551 [Legionella pneumophila 130b]
          Length = 250

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 23/249 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F   +L       +        +        L  G+      F     N +  G+D
Sbjct: 1   MK--FIQGLLLSFFFLVSPLHAQNEPIP-------LIVGVGGFYPPFIMQGTNNELFGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +     L   +     +  +  +  ++   AL +KQID        T  R  S  + F  
Sbjct: 52  IATMTELCKIM---KRQCNFRVMRFRQLIPALINKQIDAAISAMSITSER--SNLVNFSM 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   F+ ++         L    G  I V+  T     +        +    + F+
Sbjct: 107 PYLLSYSRFLTNEVHNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRM---GIIDPVIVEFD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
           R EE+  A  A++ D    D     AL  + +     +++   +     L  A+ + ++ 
Sbjct: 164 RTEEMLEALSANKIDFVLMDNP--AALYWSANSSGRLLVIGSPMLVGYGLGIAVNRENSV 221

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 222 LLKSLNDAL 230


>gi|296106266|ref|YP_003617966.1| polar amino acid transport system substrate-binding protein
           [Legionella pneumophila 2300/99 Alcoy]
 gi|295648167|gb|ADG24014.1| polar amino acid transport system substrate-binding protein
           [Legionella pneumophila 2300/99 Alcoy]
          Length = 250

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 74/248 (29%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F   +L       +        +        L  G+      F     N +  G+D
Sbjct: 1   MK--FIQGLLLSFFFLVSPLHAQNEPIP-------LIVGVGGFYPPFIMQGTNNELFGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +     L   +     +  +  +  ++   AL +KQID        T  R  S  + F  
Sbjct: 52  IATMTELCKIM---KRQCNFRVMRFRQLIPALINKQIDAAISAMSITSER--SNLVNFSM 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   F+ ++         L    G  I V+  T     +        +    + F+
Sbjct: 107 PYLLSYSRFLTNEVHNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRM---GIIDPVIVEFD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           R EE+  A  A++ D    D  A       +      +  P +I    L  A+ + ++  
Sbjct: 164 RTEEMLEALSANKIDFVLMDNPAALYWSANSSGRLLLIGSPMLIGYG-LGIAVNRENSVL 222

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 223 LKSLNDAL 230


>gi|284054140|ref|ZP_06384350.1| extracellular solute-binding protein [Arthrospira platensis str.
           Paraca]
          Length = 401

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 84/279 (30%), Gaps = 30/279 (10%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDF 63
           + +    +I     S ++ +  +  I  RG L   IN      F     +G+  G DV+ 
Sbjct: 125 YLLGNAAVIAQANQSLNSMSPDIQKIIDRGELIVAINQEDSPPFFAEDVDGELIGLDVEI 184

Query: 64  CRALSSAIFDDPSKIQYLPL--NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            R ++ ++      +++        E    +     D+       TL R     ++F   
Sbjct: 185 AREIAHSLGVK---VRFDRSAKTFNEVVNRVYKGDADMAISKLSQTLERAKI--ISFSHP 239

Query: 122 TYFDGQGFI---------MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                 G +            K  +  +    G  I V   ++ E+     F        
Sbjct: 240 YLTMRHGLLLNRLQLTQATRNKDLVDFLRDFQG-KIGVINASSYEIFAMAKFPKA----T 294

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAII 231
            I +   E++          A   D   +  + +           +    ++ P+A A+ 
Sbjct: 295 IIRYSNWEDLIRGAMRGDILAAYRDELEVKKILINYPNVALNFQTVALTDTQDPIAIALP 354

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
                    V+           +   +  ++Q+ +D ++
Sbjct: 355 WSSNHLLQFVNLYLT-------MNDKKYTVSQLLEDYSD 386


>gi|157370161|ref|YP_001478150.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157321925|gb|ABV41022.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 301

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 83/250 (33%), Gaps = 19/250 (7%)

Query: 34  GFLKCGI-NTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   + +      A   + N    G D D  + ++ ++     ++  +P + ++  L 
Sbjct: 56  GKLTVAVASENSPPLALFAEDNKTLIGSDPDIAQLVADSLG---LELNLVPTSWEDWPLG 112

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T LR+      F      D  GF +     I+S    + ++G  +
Sbjct: 113 ISSGKYDAAIFNIAVTKLRKT--KFDFA-TYRVDTLGFYVKSTSKITSINQPADIAGLRV 169

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + K +         PI        + + ++ R DA+ G  S     
Sbjct: 170 IVGSGTNQENILLGWDKQNRANGLAPVQPIYVTDDAAANLSIQSGRVDAFFGPHSTGAYK 229

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +     I P++           + D      ++     ++ + E G       + 
Sbjct: 230 AALTGKTKMVGIGPNVA----YVAVTTKKDNGLVAAINAAINGVIASGEYGQVLDRWGER 285

Query: 265 SKDTTNPDVQ 274
            +      + 
Sbjct: 286 DEKVPRSTIN 295


>gi|227875550|ref|ZP_03993690.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Mobiluncus mulieris ATCC 35243]
 gi|227843886|gb|EEJ54055.1| ABC superfamily ATP binding cassette transporter solute-binding
           protein [Mobiluncus mulieris ATCC 35243]
          Length = 314

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            D+K+R  L+ G +T       +K +G    G +VD  +A++  +               
Sbjct: 65  KDVKERDVLRNGASTDYAPLEMLKEDGTTPTGAEVDLTKAIALTMGLKDG------TTTT 118

Query: 87  ERFLALQSK---QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQ 142
           E F AL  K     DI +     T  R  +  +         G  F + K      + + 
Sbjct: 119 ETFAALLPKVGSTYDIGASGFTVTAERIKTYDML---AFKNMGTLFAVKKGNPSGFNPND 175

Query: 143 LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             GA++ VQ G+  E  +      +   A   +      + V  +     + + DA   D
Sbjct: 176 PCGATVGVQTGSYQEEDVLPRLNKECLAAGKPEIKIQKEDLVNMVIPKVISGQYDAVIAD 235

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                      +   +   +  I   +PLA  + + + +    V     +++ + +  
Sbjct: 236 DPVTAYNVKKAE--GQLETVGKIFDTTPLAIVVNKKNQDLSKAVKAAMDSLMKSGKFK 291


>gi|257876242|ref|ZP_05655895.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257810408|gb|EEV39228.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 529

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 84/296 (28%), Gaps = 43/296 (14%)

Query: 1   MYKD-FFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K+ +  ++  L +           +     +       + G+  G   F       AN
Sbjct: 1   MKKNNWIWAVFALCLTLIQLPLIVQADDQTPAE-----QFRVGMEAGYAPFNWTQTTDAN 55

Query: 54  GDW-----------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
           G              G+DV   + ++  +  +   +  +         ALQ+  ID +  
Sbjct: 56  GAVPISGEEGSAFAGGYDVQIAKRIAEGLGKE---LVIVKTQWDGLPPALQAGTIDAVIA 112

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELT 159
               T  R     + F    Y      ++ K        S++ LSGA I  Q  T     
Sbjct: 113 GMSPTAER--REQIDFTDPYYESDLVVVVRKDGAFADAKSLADLSGAKITAQLNTFHYTV 170

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           +    +    +           +  A  +   D Y  +          N    + V   +
Sbjct: 171 IDQIPEVQKEQ----AMRDFSSMRVALASGIIDGYVSERPEGVTAVGANPD-LKMVEFDE 225

Query: 220 IISKS------PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                       +A  + +GD +    V+     +   E + +  + +     D +
Sbjct: 226 GAGFETNPEDVQVAVGMRKGDPD-VEKVNEILAGISEEERVSLMDQAVLDQPADAS 280


>gi|257418660|ref|ZP_05595654.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|257160488|gb|EEU90448.1| ABC amino acid transporter [Enterococcus faecalis T11]
          Length = 507

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 3   TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 62

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 63  ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 117

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     S+  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 118 GKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 173

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIIS-----KSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 174 DGYVSERPEGITATSVNKELKMLEFPKEKGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 232

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 233 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 274

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 275 GDMFLR--GAGLTLFIA 289


>gi|116254211|ref|YP_770049.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115258859|emb|CAK09967.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 278

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 70/207 (33%), Gaps = 15/207 (7%)

Query: 1   MYKDFFV-SILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKAN 53
           M +  F  S+L    L  T+    A          ++ K G L    N  L     + + 
Sbjct: 1   MLRSHFSRSVLAASFLSVTASFALAQSCEPKVAAGELIKPGTLVMSTNPTLPPLQFIDST 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           GD KG  +D  + ++  +  +P    Y+ +        LQ+ + D+++    +T  R   
Sbjct: 61  GDLKGMRIDLGKEIAKRLCLEPE---YVRIEFSAMVPGLQAGRWDMINTGIFFTEERAKI 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ----AGTTTELTLADYFKAHNM 169
           + +                 KK +++   L+G +I V+      T T L   +   A   
Sbjct: 118 MQMI-PYEDQAISVSVAPDSKKNVAAKDDLAGMTIGVEIGGFEETKTRLLDKELRDAGKE 176

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTG 196
                 F+       A RA +      
Sbjct: 177 GLTIQTFDNFALAFQALRAGQVQGVVS 203


>gi|220914419|ref|YP_002489728.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
 gi|219861297|gb|ACL41639.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
          Length = 326

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 14/198 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A +   IK  G L      G    +     N    G +VD   A+   +     +++
Sbjct: 64  AAAAQVPDAIKADGKLTVVTTGGTAPLSTFASDNKTLIGSEVDIAYAVGETLG---LQVE 120

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-- 137
            LP+   +  L ++S + + +  N   T  R+      F      D  GF       I  
Sbjct: 121 VLPVAWADWPLGIESAKYEAVLSNVTVTEARKE--KFDFA-TYRNDLLGFYAKSDSDITE 177

Query: 138 -SSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEE---IDAAYRAHRCD 192
                 ++G  I V +GT  E  L  + + +      P+ F+  ++      A ++ R D
Sbjct: 178 VKEAKDVAGKRIIVGSGTNQEAILVRWDEENKKNGLKPVEFQYYDDDSASGLALQSGRAD 237

Query: 193 AYTGDISALYALKLTNDR 210
              G  +        + +
Sbjct: 238 LTFGPNAGAAYKAAKDGK 255


>gi|208780581|ref|ZP_03247920.1| transporter protein [Francisella novicida FTG]
 gi|208743556|gb|EDZ89861.1| transporter protein [Francisella novicida FTG]
          Length = 246

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 59/215 (27%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F  I  + ++  ++++              +  G       F+     +  + G 
Sbjct: 1   MKKTVFTFITAIAVMISSAYAD-------------ITVGTTGDYAPFSVYNPKDNKYSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A + +      +++++  +       L+S + D+       T  R+     +  
Sbjct: 48  DIKLIEAFAKS---KKEQVKFVKTSWATAENDLKSNKFDVFVGGMTITPERQKEFVFSNP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I++         K     + + +      V         +    K  N K   I     
Sbjct: 105 LISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENRGGTNQVFALQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
            +   +          D    D   +      N +
Sbjct: 163 NQAINSIIKGIDNIHSDIMFTDTLEIAYQHSKNHK 197


>gi|190891795|ref|YP_001978337.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CIAT 652]
 gi|190697074|gb|ACE91159.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CIAT 652]
          Length = 280

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 62/221 (28%), Gaps = 40/221 (18%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    S L  +I    + +              +          +     +G   GF++D
Sbjct: 5   KLLLTSALLGVISAGAAAAQTKPT--------EITIATEGAYEPWNFTGPDGKLAGFEID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L + +     K   +  +      +L +K+ D +  +   T  R     ++F    
Sbjct: 57  LANDLCARM---KVKCTIVAQDWDGLIPSLTAKKFDAIMASMIVTEKRLAV--ISFSKPY 111

Query: 123 YFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTTEL 158
                 F++ K   ++ +                          L G ++  Q  T   +
Sbjct: 112 APTAAAFMVEKTGPLADLPGTGTTVDLAADKAKVEQELQPLRDALKGKAVGAQVSTANAV 171

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            L  YFK           E+ +      +A R DA     +
Sbjct: 172 FLDTYFKGVVDPREYKTVEQHD---LDLQAGRIDAVVAQKT 209


>gi|116248724|ref|YP_764565.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253374|emb|CAK11762.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 282

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 84/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   +F+    L +L  T+    S     L  +K++GF +  I      F  V A+G   
Sbjct: 1   MKTGYFLCAASLSVLLVTAVAPASAADDKLEQLKEQGFARIAI-ANEPPFTAVGADGKVS 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   D  RA+   +                    LQ+ + D ++        R     +A
Sbjct: 60  GAAPDVARAIFEKLGVKEVVASIS--EYGAMIPGLQAGRHDAITAGLFMKPER--CNAVA 115

Query: 118 FRPITYFDGQGFIMHKKKGI-----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +      D + F + K   +       ++    A I    G T E       +A   +  
Sbjct: 116 YSEPILCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEEKLA---LEAGVPRDR 172

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            IV    +      +  R D Y+  + +++ L    + P+   + P + +       A  
Sbjct: 173 VIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFR 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D    +        +  + E  
Sbjct: 233 KQDVALRDAFDVELKKLKESGEFA 256


>gi|163792351|ref|ZP_02186328.1| ABC polar amino acid transporter, periplasmic binding protein
           [alpha proteobacterium BAL199]
 gi|159182056|gb|EDP66565.1| ABC polar amino acid transporter, periplasmic binding protein
           [alpha proteobacterium BAL199]
          Length = 276

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 71/250 (28%), Gaps = 25/250 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    + L   +L   +                LK G++      A    +G  +GF+
Sbjct: 1   MNR--LTATLGAFLLTAGAALAQEP----------LKTGVDGTFAPHAMPTLSGGVEGFN 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +          +             LQ+   D ++  T  T  R     L F  
Sbjct: 49  IDLANEIGKR---SKRGVTIEATQFSGLLPGLQAGTYDFVAAPTTVTKERAE--NLLFTE 103

Query: 121 ITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   F++      I  +++L G  I V  G+  +  +               F   
Sbjct: 104 GYLNTDFQFVILASTPDIKDLAELKGKVIAVNRGSAYDSWVRGLTDKIGWTVE--TFGTN 161

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +   A  + R  A     +        N +    ++    ++  +P+     + + E  
Sbjct: 162 TDAVQAVLSGRAYANVAGNTVSAWAVKKNPQIKLSYLHSTGLVWAAPI----RKDNAEMR 217

Query: 239 NIVSWTHYAM 248
            +V      M
Sbjct: 218 KLVENAIECM 227


>gi|269977206|ref|ZP_06184179.1| ABC transporter solute-binding protein [Mobiluncus mulieris 28-1]
 gi|306818860|ref|ZP_07452582.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus mulieris ATCC 35239]
 gi|269934509|gb|EEZ91070.1| ABC transporter solute-binding protein [Mobiluncus mulieris 28-1]
 gi|304648546|gb|EFM45849.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Mobiluncus mulieris ATCC 35239]
          Length = 314

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 79/238 (33%), Gaps = 21/238 (8%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            D+K+R  L+ G +T       +K +G    G +VD  +A++  +               
Sbjct: 65  KDVKERDVLRNGASTDYAPLEMLKEDGTTPTGAEVDLTKAIALTMGLKDG------TTTT 118

Query: 87  ERFLALQSK---QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQ 142
           E F AL  K     DI +     T  R  +  +         G  F + K      +   
Sbjct: 119 ETFAALLPKVGSTYDIGASGFTVTAERIKTYDML---AFKNMGTLFAVKKGNPSGFNPDD 175

Query: 143 LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             GA++ VQ G+  E  +      +   A   +      + V  +     + + DA   D
Sbjct: 176 PCGATVGVQTGSYQEEDVLPRLNKECLAAGKPEIKIQKEDLVNMVIPKVISGQYDAVIAD 235

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                      +   +   +  I   +PLA  + + + +    V     +++ + +  
Sbjct: 236 DPVTAYNVKKAE--GQLETVGKIFDTTPLAIVVNKKNQDLSKAVKAAMDSLMKSGKFK 291


>gi|269792188|ref|YP_003317092.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099823|gb|ACZ18810.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 510

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 66/225 (29%), Gaps = 17/225 (7%)

Query: 35  FLKC-GINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            L+  G + G V F     N      GF+VD   A++  +   P    ++  +       
Sbjct: 24  VLRWAGDSEGGVPFMFNDPNNVDRLIGFEVDIIEAVAREMGRKP---VFVNNSWDNLIPG 80

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICV 150
           L  +  D+     + T   E    +AF    Y       +  + + I S   L   ++  
Sbjct: 81  LNRRLYDVAINGLEVTPEHE--QEVAFSIPYYHTYLQIAVRRENREIRSFEDLKDKTVGT 138

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
              +     L D             +             R DA   D     A+      
Sbjct: 139 LKQSYAYFMLKD----LGC-RDIRTYIVEPNAYDDLMNGRLDATLFDAPI--AMYSAGFN 191

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           P     + + +     A A+ + D E    ++     +  + EL 
Sbjct: 192 PGV-KFVGEPVGSMTYAIAVRKEDRELLKEINAALMKLRDSGELR 235


>gi|255971748|ref|ZP_05422334.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|256618341|ref|ZP_05475187.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis ATCC 4200]
 gi|256762043|ref|ZP_05502623.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256956823|ref|ZP_05560994.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis DS5]
 gi|256960629|ref|ZP_05564800.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|257078493|ref|ZP_05572854.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|257084184|ref|ZP_05578545.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis Fly1]
 gi|257088011|ref|ZP_05582372.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257417614|ref|ZP_05594608.1| ABC-type amino acid transport system [Enterococcus faecalis
           AR01/DG]
 gi|255962766|gb|EET95242.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|256597868|gb|EEU17044.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis ATCC 4200]
 gi|256683294|gb|EEU22989.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256947319|gb|EEU63951.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis DS5]
 gi|256951125|gb|EEU67757.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|256986523|gb|EEU73825.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|256992214|gb|EEU79516.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis Fly1]
 gi|256996041|gb|EEU83343.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257159442|gb|EEU89402.1| ABC-type amino acid transport system [Enterococcus faecalis
           ARO1/DG]
          Length = 507

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 3   TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 62

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 63  ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 117

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     S+  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 118 GKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 173

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 174 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 232

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 233 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 274

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 275 GDMFLR--GAGLTLFIA 289


>gi|114704904|ref|ZP_01437812.1| ABC transporter, periplasmic amino acid-binding protein
           [Fulvimarina pelagi HTCC2506]
 gi|114539689|gb|EAU42809.1| ABC transporter, periplasmic amino acid-binding protein
           [Fulvimarina pelagi HTCC2506]
          Length = 298

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 88/262 (33%), Gaps = 25/262 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-----------KCGINTGLVGFAEV 50
            +  FV  + +      S S + ++   I +R  L           +    T    F  +
Sbjct: 22  IRLLFVLCVAITASAGPSRSQDVNLPSFIDQRQRLTQPELPDLSRLRFLTATDYPPFNFL 81

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            A G   GF++D  RA+   +   P   Q   L   E   AL  K+ + +          
Sbjct: 82  DARGRLVGFNIDLTRAICVELDVLP-ICQIEALPFGELQEALLEKRGEAIIAGIAI--DP 138

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHN 168
           +    L+F          F+  K+  I++     LSG  I +  G+  E      F+A  
Sbjct: 139 QSRNRLSFSQSYLRFPARFVTRKEDPIAAPIAANLSGRVIGLDGGSAHEA----MFRAFF 194

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDIISK 223
                 VF+       A ++   DAY GD  +L     +         S+   L +    
Sbjct: 195 PDAQARVFDDRTTALDAVKSGEVDAYFGDGISLSFWLESPRADGCCMFSDGPFLSNQYLG 254

Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245
             L+ A+   D+E    + +  
Sbjct: 255 EGLSVAVRAEDSELAEAIDYAL 276


>gi|302336124|ref|YP_003801331.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
 gi|301319964|gb|ADK68451.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
          Length = 748

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 73/219 (33%), Gaps = 15/219 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K G L    +     F  +  +G  KGF+V+  + L+  +  +   +  L  ++      
Sbjct: 50  KEGTLTVVSDLANPPFDYM-EDGVAKGFEVELMQELAQKMGLECEFLPPLKFDSI-IPTI 107

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-----KGISSVSQLSGA 146
            Q  + D+ + N   T  R     + F        QG +   +         S    + +
Sbjct: 108 QQGGKADVGASNFTITDER--RQEIDFTDAYIDSNQGIVTSAQLADSVSADVSALDDATS 165

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           SI VQAGTT E     + + +  +   +  +   +     +     A   D+  +    L
Sbjct: 166 SIAVQAGTTGES----WARENLPRATVVALDDPIQALTGVQTGLYAAAIADLPVMRYECL 221

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                ++  +  +I +       + + +    + +    
Sbjct: 222 NAY--TDLKVAREIATGEQYGIVVSKANPGLTSALDAAL 258


>gi|170742605|ref|YP_001771260.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168196879|gb|ACA18826.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 304

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 40/216 (18%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +     +  +     ++         +   K +G   G++++  R +           ++
Sbjct: 40  AAAEDTVPAV-----VRIATEGAYAPYNFTKPDGSLDGYEIELAREICKRA---KLTCEF 91

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +  +       LQ+K+ D +      T  R+    + F      D  G  +     ++ +
Sbjct: 92  VVQDWDGVVPGLQAKKFDAIMSGMTITEARQKV--IDFTRPYSGDFSGLAVDADGPLAKL 149

Query: 141 ------------------------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                                     L G +I  Q  T     L  Y K          +
Sbjct: 150 PLGDQKLSLATDEAQAQKAIDAIKPLLKGKTIGAQVSTIHANFLDKYLK---GTVEIREY 206

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           +  E+ D    A R D    +      L+ T ++P 
Sbjct: 207 KTTEQHDLDLAAGRIDGILAND---AVLRATAEKPE 239


>gi|266624424|ref|ZP_06117359.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium hathewayi DSM 13479]
 gi|288863720|gb|EFC96018.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium hathewayi DSM 13479]
          Length = 253

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 78/252 (30%), Gaps = 29/252 (11%)

Query: 32  KRGFLKCGINTGLVGFAEV---KANGDW---------KGFDVDFCRALSSAIFDDPSKIQ 79
           ++  LK  +      +        NG            G+DV   + ++  +  +   ++
Sbjct: 4   EKKVLKVAMECSYAPYNWTQPTDGNGAVPISGSSDFAYGYDVMMAKKIADTLGYE---LE 60

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKG 136
            + L+      A+QS ++D +      T  R     + F    Y+     ++    K + 
Sbjct: 61  IVKLDWDSLVPAVQSGKVDCVIAGQSITSER--LQSVDFTEPYYYATIVTLVKSGSKYEN 118

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
            +SV+ L+GA+   Q  T                      E    +  A  + RCD    
Sbjct: 119 AASVADLAGATATSQMNTIWYDN---CLPQIQDATIQPAQESAPAMLVALSSGRCDLVVT 175

Query: 197 DISALYALKLTNDRPSEHVILPDIISKS------PLAPAIIQGDTEWYNIVSWTHYAMVT 250
           D     A  +                         +  ++ +G+TE    +     AM  
Sbjct: 176 DKPTGQAALIAYPDFKLLDFTGTEGEFKVSDEDINIGISLKKGNTELKEAIDGVLAAMTE 235

Query: 251 AEELGITQKNIN 262
            +   + ++ I+
Sbjct: 236 DDFNRMMEEAIS 247


>gi|256823240|ref|YP_003147203.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Kangiella koreensis DSM 16069]
 gi|256796779|gb|ACV27435.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Kangiella koreensis DSM 16069]
          Length = 855

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 9/196 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           YK    +   +++     ++   S   + +    ++ G+           + G   G  +
Sbjct: 3   YKIGISATFVILLTLAMVWNFQGSSSDNARD---VRVGLYQNSPKI-YRNSQGQPDGLFI 58

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
               A++     +  ++ Y+     E    L +  ID L  +   T  R          +
Sbjct: 59  KLIEAIAEE---ESWQLSYVDCEWSECLNLLSNNAID-LMPDVAITDERAHRFDFHSIAV 114

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           T+   + ++  K   I  +  L G  I V   +  E+ L      + + + P+      E
Sbjct: 115 THSWSEVWV-RKDLKILGLPDLQGMRIAVLRESVQEVALQKMMMGYGLGFKPVPVNTYTE 173

Query: 182 IDAAYRAHRCDAYTGD 197
              A +A + DA   +
Sbjct: 174 GFQAVKAGKADAVITN 189


>gi|322420307|ref|YP_004199530.1| histidine kinase [Geobacter sp. M18]
 gi|320126694|gb|ADW14254.1| histidine kinase [Geobacter sp. M18]
          Length = 573

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 64/176 (36%), Gaps = 12/176 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +  +  G +     +  +  +G   G++VD  RA++  +     K+++   +  E   A
Sbjct: 26  DKQTVIVGGDRDYPPYEFMDRSGHPAGYNVDLTRAIADVMG---MKVEFRLGSWSEMRAA 82

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           L S ++D+L      +   E +  + F              K    ++S+ +L G S+ V
Sbjct: 83  LNSGRVDVLQG---MSYSAERATEVDFSVPHAVVNHAIFGRKDNPSVNSLEELKGKSVAV 139

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALK 205
                    + DY     +     + +   +      + + + A    +  +Y ++
Sbjct: 140 HRS----GIMHDYLIRQGVGARLTLTDTPADALRMVASGKIEYAVVAIVPGMYMIR 191


>gi|227431664|ref|ZP_03913697.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352567|gb|EEJ42760.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 239

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 56/204 (27%), Gaps = 15/204 (7%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    +          F  +  NG   GFD+D  ++L                     F 
Sbjct: 45  KSEKKISVLTYANWNPFEYI-KNGKVVGFDLDILKSLCKEAGYQY---TIKNTGWDSMFT 100

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149
            L S   D        T  R+ +   +F    +   Q  I+ K    I + + L    + 
Sbjct: 101 QLNSGSADAAISGITITKDRQKT--YSFSKPYFVSRQAIIVKKTDTVIKNATDLKNKKVA 158

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           VQ G+T E         ++     I  ++           + DA  GD +     K    
Sbjct: 159 VQLGSTGEEAAESILGKNSSN---ISKDKGGTTFLQVVHGQADAAIGDETT--VKKYVAS 213

Query: 210 RPSEHVIL---PDIISKSPLAPAI 230
            PS  + +                
Sbjct: 214 NPSYKLKVIYDDKNFEPEYFGLMF 237


>gi|210135130|ref|YP_002301569.1| amino acid ABC transporter [Helicobacter pylori P12]
 gi|210133098|gb|ACJ08089.1| amino acid ABC transporter [Helicobacter pylori P12]
          Length = 234

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 63/222 (28%), Gaps = 13/222 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IKKR  L          F      G   G+DV+  R L+  +      I++   +     
Sbjct: 6   IKKRSAL--AQKVFTPPFTYHNKEGKLTGYDVEVARELAKELGVK---IKFHETSWDIML 60

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASI 148
             L+S + D+++     T  ++            + G   ++ K    I  +  + G   
Sbjct: 61  TGLKSGRFDMVANQVSLT-TKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIKDIKGLRA 119

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
                +T          A       +  + + +        R D       A+     T+
Sbjct: 120 ANTLSSTYGEI------AFKYDAQIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTH 173

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 +           +  I +   +   +++     ++ 
Sbjct: 174 KNSPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLIN 215


>gi|134045901|ref|YP_001097387.1| extracellular solute-binding protein [Methanococcus maripaludis C5]
 gi|132663526|gb|ABO35172.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 248

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 78/246 (31%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  +++L             +  +   L  GI   +    +    G+ KGF+
Sbjct: 1   MKKTAILILFSMLVLTSACI-----TSKEYFESDKLVVGIYPYIP-PYQYYEKGELKGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKE-RFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++    ++  +      ++++  + K   ++A +S  +D        T  RE      F 
Sbjct: 55  IELISEIAKRMNKK---VEFVETDYKYGNYIAARSGNVDCSISAITKTASREE--DSLFS 109

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +  +             SS++   G  I V   T        Y K+ N     + +   
Sbjct: 110 QLYMYSYSSLACLDLDY-SSLTDFEGKKIGVVGDTVYVDHTESYKKSVNF--EIVKYYDY 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++++A  +   D    D      LK      ++  IL +              + +   
Sbjct: 167 YDLNSALVSGEVDGILADYFICKYLK---KNGTDLNILENTDIH-YFGIVFPLENEDLMK 222

Query: 240 IVSWTH 245
            ++   
Sbjct: 223 SINEYL 228


>gi|325478268|gb|EGC81387.1| ABC transporter, permease protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 521

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 31/224 (13%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE------------V 50
           K  F  +L +++LF     T+A+      +    + G+      F               
Sbjct: 2   KRLFNVLLAIVLLFTPLHMTSAN------EDDTFRVGMEVNYAPFNFSEVNDTNGGYPVA 55

Query: 51  KANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
            + G++  G+DV F + ++  +      ++   +       AL S +ID +      T  
Sbjct: 56  NSPGEYANGYDVQFAKKIADGLGKK---LEIYKIEWDGLIPALTSGKIDAIVAGMSPTDE 112

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKA 166
           R     + F    Y      +  K        S++    A I  Q GT     +      
Sbjct: 113 R--LEQIDFSKPYYHAKMVVVTQKDSPYVNAKSINDFKDAKITAQLGTFHVDMIDQMDGV 170

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
              +      +    + AA  A   D Y  + +   +   +N +
Sbjct: 171 AKQE----PMDSFPTMIAAANAGTIDGYISEEAGAESAVASNPK 210


>gi|295698934|ref|YP_003606827.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295438147|gb|ADG17316.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 309

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 89/253 (35%), Gaps = 21/253 (8%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
            +  L  GI       +          GFD D  + ++ ++      +  + L   +  L
Sbjct: 58  AKDELTVGIVVAHPPISTYATDAKTVVGFDPDLAQLVADSLGRK---LNVVILAWPDWPL 114

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGAS 147
           AL S ++D +  N   T  R++     F      D  GF +     I S      ++G  
Sbjct: 115 ALASGKVDAVISNVTVTEERKV--KFDFS-TYRRDEVGFFVKTDSPIKSIREPKDVAGLR 171

Query: 148 ICVQAGTTTELTLADYFK---AHNMKYHPIVFERVEEIDA-AYRAHRCDAYTGDISALYA 203
           +   AGT  E  L ++ K   AH +K   + +   + + + A ++ R DA     +AL  
Sbjct: 172 VITDAGTNQEKILLEWDKQNVAHGLKPIQVQYYDDDAVKSVALQSGRADAIFSVNAALLY 231

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA-------EELGI 256
              T+ +  +   +     ++       +  +     V+     ++         E   +
Sbjct: 232 DSATHGKTRQVGTVSGGWPRTAEVAVTTRRGSGLAAPVTIALNDLIGKGQYRAVLERWNL 291

Query: 257 TQKNINQVSKDTT 269
             + I++ + +  
Sbjct: 292 GSEAIDKAATNPP 304


>gi|254451581|ref|ZP_05065018.1| extracellular solute-binding protein, family 3 [Octadecabacter
           antarcticus 238]
 gi|198265987|gb|EDY90257.1| extracellular solute-binding protein, family 3 [Octadecabacter
           antarcticus 238]
          Length = 213

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 21/214 (9%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G       +  +   G+  GF+ +    L +         +++          L S   
Sbjct: 1   MGTEGAYAPWNFINDAGEVDGFERELGDELCARA---EMTCEWVTNEWDSIIPNLTSGNY 57

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D +      T  RE    + F                  + +   + GA I  Q GT   
Sbjct: 58  DTIIAGMSITAEREEL--IDFTQAYTPADPS----SYLALDADLDVEGAIIAAQTGTIQA 111

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +AD        +  + F   EE  AA R    DA   D S L               L
Sbjct: 112 SFIAD------QGWTVVEFATPEETLAAVRNGEADAVLADKSFLNGALEGQSD------L 159

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             +  +  +   +  G  +    +     A + +
Sbjct: 160 VMLAREEAIGGGVGMGVRQSDTELRDAFDAAIQS 193


>gi|90021124|ref|YP_526951.1| putative transglycosylase [Saccharophagus degradans 2-40]
 gi|123090581|sp|Q21KP0|MLTF_SACD2 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|89950724|gb|ABD80739.1| lytic murein transglycosylase-like protein [Saccharophagus
           degradans 2-40]
          Length = 501

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 70/238 (29%), Gaps = 11/238 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + ++  +       S   + L ++K  G L   I+            G   GF+  
Sbjct: 18  KLSLLGLVFAVAAATLVSSRIPTTLEEVKSSGKLIV-ISRNGPTTYYEGPAG-HTGFEYV 75

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +A +  +  D    +   L      +  ++    + +     T  R     + F    
Sbjct: 76  MAKAFAKHLGVDLEVREIEDLGEMLDKVGTKAG--HLAASGLTVTEKRAR--KVLFAEPY 131

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFERVE 180
               Q  I    +    ++  L G  + V + ++    L +  +   ++ +       + 
Sbjct: 132 LQVTQQLIYRSGESKPETIEDLYGKRVMVISNSSHSERLKELQREYRDLAWEEQHDVDML 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           ++       + D    D +A    +    + +    + +      LA A  Q      
Sbjct: 192 DLLEMVHNGKIDYTIVDSNAYQINRPVYPKATVAFDISEPQD---LAWAFPQQKDASL 246


>gi|161521795|ref|YP_001585222.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189352043|ref|YP_001947670.1| ABC amino acid transporter periplasmic ligand-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160345845|gb|ABX18930.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189336065|dbj|BAG45134.1| ABC amino acid transporter periplasmic ligand-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 277

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 75/244 (30%), Gaps = 20/244 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           +      +    LF  + S  A       +KK G L+CG       +       G++ GF
Sbjct: 9   RQLVACAVATTSLFAATPSHAAGPDAWAGVKKAGVLRCGAAVA-PPYVMRDPKTGNYSGF 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D CR     +     K++++  +       LQS + D+   +       E    +AF 
Sbjct: 68  FSDLCRDFGQNVLK--VKVEFVDTSWDNIVAGLQSDKWDL---SLALNDTPEREKAVAFS 122

Query: 120 PITYFDGQGFIM-------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                    F+         K     +       +I V +GT+ +  ++   K       
Sbjct: 123 APATDYNVSFVYNRNNPRVPKALRTLADIDKPDLTIAVMSGTSQDKAISAELKRA----R 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +     +E   +  + R D           L   +   +        +++  +A  + +
Sbjct: 179 IMRLPGNDETRLSLISKRADLLADANITNMLLTEAHPDWAASFNPTPPLAQQEVAFGLRK 238

Query: 233 GDTE 236
              +
Sbjct: 239 DTPK 242


>gi|318061022|ref|ZP_07979743.1| substrate-binding protein transport system associated [Streptomyces
           sp. SA3_actG]
          Length = 370

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 16/190 (8%)

Query: 24  ASILGDIKKRGFLKCGI---NTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           A +  +IK +G L  G+     G      + ++     G + D  R +++ +   P    
Sbjct: 102 AQLPKEIKDKGELVIGVGVLPAGSPPLNFIGSDQKTVTGSESDLGRLVAATLGLKP---V 158

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
                 +  FL + S ++D    N   T  R+      F      D   F   K +  + 
Sbjct: 159 IRKSTWENMFLGIDSGKVDAAFSNVTDTEERKR--KYEFA-SYRQDNLAFETDKSQSWTF 215

Query: 140 VSQ---LSGASICVQAGTTTELTL---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 L+G ++ V +GT  E  L       K    K     +  +     A    + DA
Sbjct: 216 TGDYKVLAGKTVAVSSGTNQERILLNWQRQLKKQGKKLDVKHYPDLNSTYLALSGKKIDA 275

Query: 194 YTGDISALYA 203
           Y G   A+  
Sbjct: 276 YLGPNPAIAY 285


>gi|170697559|ref|ZP_02888649.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170137582|gb|EDT05820.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 303

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           ++G L  GI+ G+   +          G D D  + ++  +     K++ +PL   +  L
Sbjct: 52  EKGVLTVGISVGVPPISVYATDAKTIVGADPDLAQLVADELG---LKLKLVPLAWADWPL 108

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGAS 147
           A+ S ++D +  N   T  R+      F      D  GF + +      I     ++G  
Sbjct: 109 AVASGKVDAVLSNVTVTEARK--QKFDFS-TYRRDVLGFYVEQNSAIKQIREPKDIAGLR 165

Query: 148 ICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +   +GT  E  L  + K +        H + +E       A  + R DA     + L  
Sbjct: 166 VIGDSGTNQEKILLAWDKENVAHGLKPIHVLYYEDPSVRTLALASGRADAIFSVNAVLAY 225

Query: 204 LKLTNDR 210
                 +
Sbjct: 226 QVSQGAK 232


>gi|257081536|ref|ZP_05575897.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|256989566|gb|EEU76868.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
          Length = 507

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 3   THASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 62

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 63  ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 117

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     S+  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 118 GKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 173

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 174 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 232

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 233 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 274

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 275 GDMFLR--GAGLTLFIA 289


>gi|242237977|ref|YP_002986158.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242130034|gb|ACS84336.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 305

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 19/231 (8%)

Query: 34  GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   ++T      + +   N    G D D  R ++ ++      ++ +P   ++  L 
Sbjct: 60  GTLTVAVSTLSSPPLSVLADDNKTRIGSDPDIARLIADSLG---LTLKLVPTAWEDWPLG 116

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASI 148
           + + + DI   N   T  R+      F      D  GF +     I        ++G  +
Sbjct: 117 IATGRYDIAIINIAVTKARKER--FDFA-TYRIDTLGFYVKNSSHIKAIRGPEDIAGLKV 173

Query: 149 CVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L ++ + +         PI          +  + R DA+ G  S     
Sbjct: 174 IVGSGTNQENILLEWDRQNRARGLPPVAPIYVTDDAAATLSLLSGRVDAFFGPHSIGAYK 233

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                +       P             Q        +S     ++ + +  
Sbjct: 234 AALTGQTRMVGRGPTTAWV----AVTTQKGNGLIEPISTALNGVIQSGQYA 280


>gi|325126419|gb|ADY85749.1| ABC transporter solute-binding component [Lactobacillus
          delbrueckii subsp. bulgaricus 2038]
          Length = 97

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 8/90 (8%)

Query: 1  MY--KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
          M   K   +  L L     T+       +        IKKRG L  G++   V     + 
Sbjct: 1  MKWFKRILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQK 60

Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
          +G   G+DVD  +A+   +           
Sbjct: 61 DGQLVGYDVDLAKAVCKKLGLKADVQTIDW 90


>gi|159899279|ref|YP_001545526.1| extracellular solute-binding protein [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159892318|gb|ABX05398.1| extracellular solute-binding protein family 3 [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 277

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 63/216 (29%), Gaps = 12/216 (5%)

Query: 35  FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +   +      F  +    G  +G+D D   A+ + +   P    +   + +    A+ 
Sbjct: 50  EVSIAVENLYPPFNYINPQTGKGEGWDYDAWTAICAELNCKP---VFKETSWEGMIQAVG 106

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152
           + Q D  +     T  R   +   F        Q  ++   +   +     +     +  
Sbjct: 107 NGQFDAAADGITITPERAEQVA--FSDGYIQISQRLLVRNDETRFTSMDEFAKTEFRLGT 164

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T T     +  K    +     FE      AA      DA   D +         +   
Sbjct: 165 QTGTSNY--ETAKGLLDEARIQGFETFPFAVAALINGDVDAVIMDET--AGQGYVGNNSD 220

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +  ++ D I    L     + +++    V+    A+
Sbjct: 221 QLKLVGDPIKSDQLGFIFPK-NSDLVEPVNAALKAL 255


>gi|302552899|ref|ZP_07305241.1| extracellular solute-binding protein, family 3 [Streptomyces
           viridochromogenes DSM 40736]
 gi|302470517|gb|EFL33610.1| extracellular solute-binding protein, family 3 [Streptomyces
           viridochromogenes DSM 40736]
          Length = 272

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 10/187 (5%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
            +S    ++  G +     +    FA   A G   GF V+     +  +     K+QY  
Sbjct: 16  ASSKYELVQD-GVITAATQSEQPPFAITDAKGRPTGFAVELMNESAKRLG---LKVQYKT 71

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
              +     L + Q D+       T  R+    +AF    Y+     +  K    ++VS 
Sbjct: 72  TTLQGILAGLSAGQYDVGVAGVGATAERKK--SVAFTTPFYWGFTDILTPKGGRQNAVSD 129

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
             G  +   +G+  E  +    K    +   + F+    +     +   +A     ++  
Sbjct: 130 FDGKRVGAVSGSVQEDFVHREMK----RVKLVKFKDQTALITQLLSGGIEAAVLGGASAD 185

Query: 203 ALKLTND 209
           A      
Sbjct: 186 AYVAKEP 192


>gi|262395165|ref|YP_003287019.1| transglycosylase Slt family [Vibrio sp. Ex25]
 gi|262338759|gb|ACY52554.1| transglycosylase Slt family [Vibrio sp. Ex25]
          Length = 502

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 24/258 (9%)

Query: 10  LCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           LC ++L   S S  A              L  IK++  L+  ++  L GF  +   G  K
Sbjct: 6   LCAVMLLLLSASVCALQISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTPK 63

Query: 58  GFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           G   +        +        +Q +PL   +   AL++   D++  N   T  R+  + 
Sbjct: 64  GIGAELLAHFEKDLRKLKPKLNVQIIPLARDQLLPALENGSGDLVVANLTITNSRKQKVD 123

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPI 174
            +   +T  D           ++++ QLSG  + V+A ++   ++    K  +     P+
Sbjct: 124 FSSPILTGIDEWIVTNKNTPAMTNIEQLSGKEVWVRASSSYFESIQALNKKLNKKGLPPV 183

Query: 175 VFERVEEIDAA------YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           V   +EE                 A   D           D    H  +P   +   +A 
Sbjct: 184 VVHFIEETLQDYELVGMLNNGYVKAIVLDSHKAKLWLKVMDDIRAHPEIPIRENGK-IAW 242

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A+ +       +V+    
Sbjct: 243 AMRENSPSLKAVVNKFIQ 260


>gi|261823282|ref|YP_003261388.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261607295|gb|ACX89781.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 289

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 38/239 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     + C + +  T  ++  +   + KK   ++         +   K +G   G +
Sbjct: 1   MIKSKLTLLACSLCMAGTLAASFTASAEE-KKWTTVRIATEGAYHPYNFTKPDGTLDGME 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + L + +     K + +         AL + + D +      T  R     + F  
Sbjct: 60  IELYKVLCNNM---QVKCEIMVQPFASAIPALNAGKYDAIIAGMSATAKR--REVIDFSQ 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------------------------LSGASICVQAGT 154
                GQ F + K   ++                              L G +I VQ+ +
Sbjct: 115 PYTQAGQTFAVLKSSSLAKDFPDAGVRFSIEPADEAKALAEVEKLKPLLEGKTIGVQSAS 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                L  Y K          ++  +E D   +A R D           LK T D+P  
Sbjct: 175 IASAFLDKYMK---GVMKVREYKTTQEHDLDLKAGRVDLVIASAP---YLKSTTDKPGN 227


>gi|254230255|ref|ZP_04923646.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio
           sp. Ex25]
 gi|151937235|gb|EDN56102.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio
           sp. Ex25]
          Length = 504

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 24/258 (9%)

Query: 10  LCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           LC ++L   S S  A              L  IK++  L+  ++  L GF  +   G  K
Sbjct: 8   LCAVMLLLLSASVCALQISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTPK 65

Query: 58  GFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           G   +        +        +Q +PL   +   AL++   D++  N   T  R+  + 
Sbjct: 66  GIGAELLAHFEKDLRKLKPKLNVQIIPLARDQLLPALENGSGDLVVANLTITNSRKQKVD 125

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPI 174
            +   +T  D           ++++ QLSG  + V+A ++   ++    K  +     P+
Sbjct: 126 FSSPILTGIDEWIVTNKNTPAMTNIEQLSGKEVWVRASSSYFESIQALNKKLNKKGLPPV 185

Query: 175 VFERVEEIDAA------YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           V   +EE                 A   D           D    H  +P   +   +A 
Sbjct: 186 VVHFIEETLQDYELVGMLNNGYVKAIVLDSHKAKLWLKVMDDIRAHPEIPIRENGK-IAW 244

Query: 229 AIIQGDTEWYNIVSWTHY 246
           A+ +       +V+    
Sbjct: 245 AMRENSPSLKAVVNKFIQ 262


>gi|52841785|ref|YP_095584.1| arginine 3rd transport system periplasmic binding protein
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52628896|gb|AAU27637.1| arginine 3rd transport system periplasmic binding protein
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 245

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 12/188 (6%)

Query: 36  LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G +     F      N    GFD+D  + +   +    +   +      + F AL++
Sbjct: 21  LTIGTSKFNPPFEVWSGNNSSLYGFDIDLMQEICRRL---HATCTFEAYIFDDLFPALKN 77

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +++D++  +   T  R+      F          +I      IS+   L G  I V+ GT
Sbjct: 78  REVDLVIASMIITDERKKH--FIFSLPYMESNSQYITTVDSKISTFDDLHGKKIGVRKGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +     + N     I +E ++++      ++ DA   D     A       P  +
Sbjct: 136 PYARQVL----SENRNNQVIFYELIQDMLLGLSNNQVDASLMDYE--AAKYWMASEPYAY 189

Query: 215 VILPDIIS 222
            ++     
Sbjct: 190 KLIGKKYK 197


>gi|147678666|ref|YP_001212881.1| ABC-type amino acid transport/signal transduction system
           [Pelotomaculum thermopropionicum SI]
 gi|146274763|dbj|BAF60512.1| ABC-type amino acid transport/signal transduction system
           [Pelotomaculum thermopropionicum SI]
          Length = 762

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 20/219 (9%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            LK G++     F     N +  G+D +  R +   +      +++  +       ALQ+
Sbjct: 180 VLKIGVSATREPFCFTDENRNVIGYDGELARRIGIKLG---RPVEFSDMKFAALIPALQA 236

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-------ISSVSQLSGAS 147
            +ID+       T   E    + F    +   Q  ++ K          ++S+  + G  
Sbjct: 237 GKIDLAI---SMTPTGERKKSINFSQPVFASAQVMLVKKAPDARTSGGKMASLDDIDGKR 293

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  GT  +  +A  +           F+   ++  A +  + D     +    A  L 
Sbjct: 294 VAVYTGTIFDAFVAGRYP----GAEIKRFDSTADMILALKNKKVD--VAFLDLTSAKVLL 347

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              P E  IL D     PL     + +       +    
Sbjct: 348 KSNP-ELGILTDDALTRPLGVGFNKNNPALRERFNNYLK 385



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 8/102 (7%)

Query: 35  FLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +  G+    L   A +  NG + GFD++  +  +     +  +++ + +       AL 
Sbjct: 421 EIVLGVAVADLPYVAYM--NGKYVGFDIEMLQRFAR---HEGFRLKIMTMEFSALVTALA 475

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           S +ID+++     T  R+    + F     +     +  K  
Sbjct: 476 SGKIDMITDGIAITEERQK--QIDFSDPYMYFKTVVVALKAN 515


>gi|319939707|ref|ZP_08014065.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV]
 gi|319811125|gb|EFW07434.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV]
          Length = 521

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 72/255 (28%), Gaps = 29/255 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57
           M K F      L++ F  +    A          +L+ G+      F        NG  K
Sbjct: 1   MKKLFLSLFALLLLSFGFANRAQADE--------YLRIGMEAAYAPFNWTQDDDKNGAVK 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+   P  ++    +      AL S ++D++      T 
Sbjct: 53  IEGTNQYANGYDVQIAKQVAKALGKKPLVVK---TSWNGLIPALTSGKLDMIVAGMSPTA 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  +   F    Y      +++K    ++   L          +   + L +      
Sbjct: 110 ERKKEIA--FSNSYYTSEPVVLVNKDGAYANAKTLKDFKGAKIT-SQQGVYLYNLISQLT 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--- 225
                       ++  A  +   D Y  +       +  N +                  
Sbjct: 167 GAKQETAMGDFAQMRQALESGVIDGYISERPEALTAESANSKFKMIQFKKGFEVNEEDAT 226

Query: 226 LAPAIIQGDTEWYNI 240
           +A  + + D     +
Sbjct: 227 IAIGMRKNDNRLEQV 241


>gi|315160767|gb|EFU04784.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315579366|gb|EFU91557.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
          Length = 546

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 91/316 (28%), Gaps = 51/316 (16%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 42  TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 102 ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 156

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     ++  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 157 GKYANAKNLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 212

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 213 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 271

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 272 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 313

Query: 307 GEMFDRNLGNQSELKI 322
           G+MF R     + L +
Sbjct: 314 GDMFLR----GTGLTL 325


>gi|54294402|ref|YP_126817.1| hypothetical protein lpl1471 [Legionella pneumophila str. Lens]
 gi|53754234|emb|CAH15711.1| hypothetical protein lpl1471 [Legionella pneumophila str. Lens]
          Length = 238

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 67/212 (31%), Gaps = 13/212 (6%)

Query: 36  LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G +     F      N    GFD+D  + +   +    +   +      + F AL+ 
Sbjct: 21  LTIGTSKFNPPFEVWSGNNSSLYGFDIDLMQEICRRL---HATCTFEAYIFDDLFPALKK 77

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +++D++  +   T  R+      F          +I      IS+   L G  I V+ GT
Sbjct: 78  REVDLVIASMIITDERKKH--FIFSLPYMESNSQYITTVDSKISTFDDLHGKKIGVRKGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +     + N     I +E ++++      +  DA   D     A       P  +
Sbjct: 136 PYARQVL----SENRNNQVIFYELIQDMLLGLSNNEVDASLMDYE--AAKYWMASEPYAY 189

Query: 215 VILPDIISK-SPLAPAIIQGDTEWYNIVSWTH 245
            ++   IS     +             ++   
Sbjct: 190 KLIGKKISIGEGYSIMANPDQFVLIKKINKIL 221


>gi|325273046|ref|ZP_08139356.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Pseudomonas sp. TJI-51]
 gi|324101819|gb|EGB99355.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Pseudomonas sp. TJI-51]
          Length = 1247

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 75/256 (29%), Gaps = 16/256 (6%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + L+IL   S +  A  L D ++        L  G++     F      G ++G   D+
Sbjct: 6   AILLLILIVWSTTAGALTLTDEEQAWLAAHPQLSLGVDASWPPFEFRDQEGRYQGLAADY 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              +   +      +   P+        L   + + +          E    L+F     
Sbjct: 66  IAKIQQRLG-----VTLKPVEPSNWTEVLAQARENRIDLLPGIMSTPERQAYLSFTRPYL 120

Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                 + HK       +  L G  I V         L    + H+   + +    V   
Sbjct: 121 DFPIVILAHKGGAQPRDLKDLYGLKIAVVENYAPHELL----RTHHPDLNLVALPNVSSA 176

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A    + DA  GD+++             +V          LA A+ + +     I+ 
Sbjct: 177 LQALATDQVDAVVGDLASSIWSLRQLKLDGLYVSGETPYRYQ-LAMAVPRNNPVLVGILD 235

Query: 243 WTHYAMVTAEELGITQ 258
                M + E   I Q
Sbjct: 236 KVMADMSSGEISEIQQ 251


>gi|222106295|ref|YP_002547086.1| ABC transporter substrate binding protein [Agrobacterium vitis S4]
 gi|221737474|gb|ACM38370.1| ABC transporter substrate binding protein [Agrobacterium vitis S4]
          Length = 311

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 14/183 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L   +  G    A          GFD D    L+ ++     K+  + +   +  L L
Sbjct: 62  GTLTVAVAVGSPPIAAYATDASTVVGFDPDLALLLAESLG---LKLDLVSVAWADWPLGL 118

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---SQLSGASIC 149
            S + D +  N   T  R+      F     +   GF +     I+++     ++G  I 
Sbjct: 119 ASGKYDAVISNVGVTEQRK--QKFDFS-TYRYGLHGFYVKNDSPITALKEQKDVAGLRII 175

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V +GT  E  L ++ K +            ++     D A ++ R DA  G  +      
Sbjct: 176 VASGTIQERILLEWDKQNRANGLKPLELQYYDDEAAADLALQSGRADANFGPNAMQAWQA 235

Query: 206 LTN 208
            T 
Sbjct: 236 ATL 238


>gi|307274211|ref|ZP_07555419.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307291685|ref|ZP_07571560.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312904644|ref|ZP_07763799.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|306497304|gb|EFM66846.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306509173|gb|EFM78235.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|310631996|gb|EFQ15279.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|315028836|gb|EFT40768.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315145376|gb|EFT89392.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 546

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 42  TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 102 ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 156

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     ++  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 157 GKYANAKNLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 212

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 213 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 271

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 272 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 313

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 314 GDMFLR--GAGLTLFIA 328


>gi|302517798|ref|ZP_07270140.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78]
 gi|302426693|gb|EFK98508.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78]
          Length = 340

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 16/190 (8%)

Query: 24  ASILGDIKKRGFLKCGI---NTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           A +  +IK +G L  G+     G      + ++     G + D  R +++ +   P    
Sbjct: 72  AQLPKEIKDKGELVIGVGVLPAGSPPLNFIGSDQKTVTGSESDLGRLVAATLGLKP---V 128

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
                 +  FL + S ++D    N   T  R+      F      D   F   K +  + 
Sbjct: 129 IRKSTWENMFLGIDSGKVDAAFSNVTDTEERKR--KYEFA-SYRQDNLAFETDKSQSWTF 185

Query: 140 VSQ---LSGASICVQAGTTTELTL---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 L+G ++ V +GT  E  L       K    K     +  +     A    + DA
Sbjct: 186 TGDYKVLAGKTVAVSSGTNQERILLNWQRQLKKQGKKLDVKHYPDLNSTYLALSGKKIDA 245

Query: 194 YTGDISALYA 203
           Y G   A+  
Sbjct: 246 YLGPNPAIAY 255


>gi|224823904|ref|ZP_03697013.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224604359|gb|EEG10533.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 275

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 83/260 (31%), Gaps = 25/260 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F++ L +  L  T  +  A+ L DI+  G L+  +      F+ V  +G+  G D
Sbjct: 1   MNRRHFLTALLVAPLLLTQQARAAN-LDDIRAGGVLRVAVYRDFPPFSFV-KDGELTGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL---------LRE 111
           VD  RA+   +    + +   P +  +  L     +   L   T   +          R 
Sbjct: 59  VDLARAIGKKLGLAVNFMPITPADDVDGDLRNAVWKGHYLGGGTADLMLHVPFDPELARR 118

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                 F      +             S  Q+   SI V+  +  +L L+       ++ 
Sbjct: 119 NDNAYLFSAYYSEN---LAWAGGNVPGSTLQIGQDSIAVENDSLADLYLSSLQGGR-LRS 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
               +   +   AA R  +  A  G  S L             +   +     P AP +I
Sbjct: 175 QLQHYPSAQGAVAALREDKAGAVYGTQSEL----------EWGLPRGEWRLGQPQAPGLI 224

Query: 232 QGDTEWYNIVSWTHYAMVTA 251
           +   E       +   +  A
Sbjct: 225 KARWEVGMATKESLRDLAWA 244


>gi|89255621|ref|YP_512982.1| cyclohexadienyl dehydratase precursor, pseuodogene [Francisella
           tularensis subsp. holarctica LVS]
 gi|167009937|ref|ZP_02274868.1| cyclohexadienyl dehydratase precursor,psueodogene [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367014|ref|ZP_04983050.1| cyclohexadienyl dehydratase precursor [Francisella tularensis
           subsp. holarctica 257]
 gi|89143452|emb|CAJ78628.1| cyclohexadienyl dehydratase precursor,psueodogene [Francisella
           tularensis subsp. holarctica LVS]
 gi|134252840|gb|EBA51934.1| cyclohexadienyl dehydratase precursor [Francisella tularensis
           subsp. holarctica 257]
          Length = 246

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 59/215 (27%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F  I  + ++  ++++              +  G       F+     +  + G 
Sbjct: 1   MKKTVFTFITAIAVMISSAYAD-------------ITVGTTGDYAPFSVYNPKDNKYSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A +    +   +++++  +       L+S + D+       T  R+     +  
Sbjct: 48  DIKLIEAFAK---NKKEQVKFVKTSWATAENDLKSNKFDVFVGGMTITPERQKEFVFSNP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I++         K     + + +      V         +    K  N K   I     
Sbjct: 105 LISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENRGGTNQVFALQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
            +   +          D    D   +      N +
Sbjct: 163 NQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 197


>gi|170746806|ref|YP_001753066.1| extracellular solute-binding protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653328|gb|ACB22383.1| extracellular solute-binding protein family 3 [Methylobacterium
           radiotolerans JCM 2831]
          Length = 276

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 80/249 (32%), Gaps = 21/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M +      L   +L     +   +          LK G     + F  +       +G 
Sbjct: 20  MRRRLAKLCLSSALLLGILGAAVGAQP--------LKVGSTPTGLPFTFLDTKTNTIQGV 71

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD   A+S         +   PL       AL + +IDI++     T  R+    ++F 
Sbjct: 72  MVDLVNAVSKEAG---FTVAVEPLQFSTLIPALTASKIDIIAAAMFITPQRKEV--VSFS 126

Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y  G+G I+ K      +S + L G ++  Q GT     L    K   +     +++
Sbjct: 127 APVYSYGEGLIVPKTDTKDYTSFADLKGETVGAQVGTAFVEPL----KKSGLFNEVKIYD 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTE 236
            + +I     + R  A   D   L         P    V        + +  ++ + DTE
Sbjct: 183 AIPDIIRDVNSGRLKAGFADAPILAYYVKQGLFPGVRLVETFKPTVVASVGLSVRKTDTE 242

Query: 237 WYNIVSWTH 245
               +    
Sbjct: 243 LLAKIDAAL 251


>gi|83643769|ref|YP_432204.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis
           KCTC 2396]
 gi|83631812|gb|ABC27779.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Hahella chejuensis KCTC
           2396]
          Length = 275

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 77/264 (29%), Gaps = 24/264 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F   +L L           A    +I K G +  G+      +  +   G+  G  
Sbjct: 1   MKSIFAFILLTLSTFTM------ADTWDEISKEGKITLGV-ANERPYGYLTPMGEPAGEA 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                 +   +  D  ++             L++ + D+++        R     + F  
Sbjct: 54  PSIAMYVLDKLGVDDVEVV--VTEFGSLIPGLKAGRFDVIAAGMYVNPKR--CKQVLFSN 109

Query: 121 ITYFDGQGFI-----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            TY  G+GF+          G   V +  G  + V AG         +    +     + 
Sbjct: 110 PTYTIGEGFLVLDGNPKGLHGYGDVKKADGVKMGVMAGAVEFGYAKKFGVPLD---RIVT 166

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLT-----NDRPSEHVILPDIISKSPLAPAI 230
                   AA +A R DA  G    +  L          +P + + +     K   A   
Sbjct: 167 LPDYPAGVAALKAGRIDALAGTSLTMAQLAQKDERVELAQPFDELKIEGESVKGYGAFGF 226

Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254
            +GD    +  +      +  E+ 
Sbjct: 227 RKGDETLRDNFNRVLDGFLGTEQH 250


>gi|146311741|ref|YP_001176815.1| extracellular solute-binding protein [Enterobacter sp. 638]
 gi|145318617|gb|ABP60764.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Enterobacter sp. 638]
          Length = 310

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 86/310 (27%), Gaps = 42/310 (13%)

Query: 1   MYKDFFVSILCLIIL------------FFTSFSTNASILGDIKKR--------------- 33
           M K   V  L L                  S   N + +  +K +               
Sbjct: 1   MQKSSLVLALALAFTPAVWAENVNINGTGVSLEANKTPVNTVKNQQAIAQLPAGLHLAVP 60

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     I              N    G + D  R ++ ++     ++  +P + ++  L 
Sbjct: 61  GKFTVAIAGLSQPPLTVFADDNKTLIGSEADIARLVADSLG---LELNIVPTSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I        ++G  I
Sbjct: 118 VTSGKYDAAISNITVTKERKE--KFDFA-TYRKDSLGFYVKSTSPIKQLEKAEDIAGLRI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A ++ R DA+ G        
Sbjct: 175 IVGSGTNQEAILLAWDAENQKKGLKPFTPVYTKDDAAQTLALQSGRADAFFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++  +     V      ++   +         + 
Sbjct: 235 AALTGKTKLVGSVDGGWPKAAHIAVTLKKGSGLAEPVQTALNGVIKNGDYDKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +   + +V 
Sbjct: 295 VERIPSSEVN 304


>gi|115314124|ref|YP_762847.1| hypothetical protein FTH_0181 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156501570|ref|YP_001427635.1| ABC transporter perplasmic protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254368568|ref|ZP_04984584.1| cyclohexadienyl dehydratase precursor,psueodogene [Francisella
           tularensis subsp. holarctica FSC022]
 gi|115129023|gb|ABI82210.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156252173|gb|ABU60679.1| ABC transporter, perplasmic component [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|157121471|gb|EDO65662.1| cyclohexadienyl dehydratase precursor,psueodogene [Francisella
           tularensis subsp. holarctica FSC022]
          Length = 246

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 59/215 (27%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F  I  + ++  ++++              +  G       F+     +  + G 
Sbjct: 1   MKKTVFTFITAIAVMISSAYAD-------------ITVGTTGDYAPFSVYNPKDNKYSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A +    +   +++++  +       L+S + D+       T  R+     +  
Sbjct: 48  DIKLIEAFAK---NKKEQVKFVKTSWATAENDLKSNKFDVFVGGMTITPERQKEFVFSNP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I++         K     + + +      V         +    K  N K   I     
Sbjct: 105 LISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENRGGTNQVFALQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
            +   +          D    D   +      N +
Sbjct: 163 NQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 197


>gi|330904270|gb|EGH34842.1| extracellular solute-binding protein [Pseudomonas syringae pv.
          japonica str. M301072PT]
          Length = 71

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 3  KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
          K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D D
Sbjct: 4  KSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGIDAD 63

Query: 63 FCRALSSA 70
           CRA+++A
Sbjct: 64 VCRAVAAA 71


>gi|288957661|ref|YP_003448002.1| hypothetical protein AZL_008200 [Azospirillum sp. B510]
 gi|288958896|ref|YP_003449237.1| octopine/nopaline transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288909969|dbj|BAI71458.1| hypothetical protein AZL_008200 [Azospirillum sp. B510]
 gi|288911204|dbj|BAI72693.1| octopine/nopaline transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 277

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 76/262 (29%), Gaps = 41/262 (15%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S    A  L        L+         +    A+G   GF+VD    L   +    ++ 
Sbjct: 21  SGPVAADSL-------KLRIATEGAFAPWNATTADGKIVGFEVDLVHDLCRRM---EAEC 70

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI- 137
           + +  +       LQ  + D +      T  RE    + F      D   F +     + 
Sbjct: 71  EVVAQDWDGILPGLQQGRYDAVIAGVSITPERERV--VDFSAAYAADPAMFAVQHGSPLG 128

Query: 138 ---------------------SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                                +    L G ++ VQ  T  E  +   F A         +
Sbjct: 129 GAFPVIARIDLAAGDGQPGVAAMAKALEGKTVAVQVNTIHERMVEALFPAA----RVRAY 184

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E+++       A R DA  G+ S   AL+          +     S+  L   +     +
Sbjct: 185 EKLDYAALDLAAGRVDALLGNRS---ALEAIMKADGRVAVAGPTFSRGALGAGVGVAVRK 241

Query: 237 WYNIVSWTHYAMVTAEELGITQ 258
              + +    A+ +A E G   
Sbjct: 242 GNPLAARFTQAIASAGEDGTAS 263


>gi|241764176|ref|ZP_04762211.1| Arogenate dehydratase [Acidovorax delafieldii 2AN]
 gi|241366513|gb|EER61013.1| Arogenate dehydratase [Acidovorax delafieldii 2AN]
          Length = 260

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 76/233 (32%), Gaps = 14/233 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           F+  +     L  I +   ++ G       FA +K +G + G D+D    ++  +     
Sbjct: 20  FSPAAQAGPRLDRIMEAKVIRVGTPGDYRPFA-IKTDGGYSGHDIDVIETMAKELGVK-- 76

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135
            I+Y+P         LQ  + D+        + R         P     G+  ++     
Sbjct: 77  -IEYVPTTWPNLVKDLQGDKFDVAVGGVTRNVNRMRI--FDMLPGYAPFGKVALVRAADK 133

Query: 136 -GISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
              +SV  ++  ++ V      T E  +    KA          ++  EI A     + D
Sbjct: 134 TKFTSVDAMNQPTVRVIKNPGGTNETYVLANLKAA----QVSTHDKNAEIPALIAEGKGD 189

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +          + R +   +   +  K+ L   +   D ++  ++ +  
Sbjct: 190 VMITETYEALHYAKADPRLAAAFVDATLTPKNYLGFMLPTDDADYVRVMGFVW 242


>gi|307278646|ref|ZP_07559716.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306504706|gb|EFM73906.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
          Length = 546

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 42  TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 101

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 102 ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 156

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     ++  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 157 GKYANAKNLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 212

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 213 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 271

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 272 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 313

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 314 GDMFLR--GAGLTLFIA 328


>gi|262392784|ref|YP_003284638.1| amino acid ABC transporter amino acid-binding portion [Vibrio sp.
           Ex25]
 gi|262336378|gb|ACY50173.1| amino acid ABC transporter amino acid-binding portion [Vibrio sp.
           Ex25]
          Length = 248

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWEEIGKR---NDYKIEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDERKA--KYLFADPYVVDGAQITVRKGNDSIKGVDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRQYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P E    P    ++       +   +    V+   
Sbjct: 188 TGLPLELAGEPFETIQNAWPFVDNEKGRKLQEEVNKAL 225


>gi|126724324|ref|ZP_01740167.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Rhodobacterales bacterium HTCC2150]
 gi|126705488|gb|EBA04578.1| putative cyclohexadienyl dehydratase precursor signal peptide
           protein [Rhodobacterales bacterium HTCC2150]
          Length = 256

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 13/220 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           L +I   G LK G        +        +KGFD+D    L++ +  +   ++++P + 
Sbjct: 27  LQEILSTGVLKVGTTGDWNPMSVRDPATNSYKGFDIDVMTELANDLGVE---VEFVPTDW 83

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-- 143
           K     + + Q   ++ +   +  R  + G +   ++                    +  
Sbjct: 84  KTLVNGVVAGQYH-ITGSASISPARMKAAGFSESYLSVEIMPFTSAENAGKFDGYDAINK 142

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
               +    GTT E  + ++F          V E          A R D +    S +  
Sbjct: 143 PDVKVATTLGTTFEKLVREWFP----DADIKVVEAPARGYQEVLAGRADVFIT--SNIEG 196

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             L        V   +  + SP+A  + Q D  W N V+ 
Sbjct: 197 STLGEKFGVVRVEGAEARTPSPIAMLLPQADQVWINYVNN 236


>gi|148543337|ref|YP_001270707.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184152747|ref|YP_001841088.1| glutamine ABC transporter substrate binding and permease components
           [Lactobacillus reuteri JCM 1112]
 gi|227364409|ref|ZP_03848499.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325683609|ref|ZP_08163125.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530371|gb|ABQ82370.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus reuteri DSM 20016]
 gi|183224091|dbj|BAG24608.1| glutamine ABC transporter substrate binding and permease components
           [Lactobacillus reuteri JCM 1112]
 gi|227070502|gb|EEI08835.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324977959|gb|EGC14910.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 487

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 99/309 (32%), Gaps = 20/309 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---- 57
            K+  ++I+ ++ +           +             N     F    + G +     
Sbjct: 6   IKNMIITIVAVLGIVVGWQMVEPQQVSA--AEPTYTFATNNTFEPFEIQDSKGGYSGKNP 63

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G +++  + ++     +  K +  P++      AL++ Q+D +      T  R+      
Sbjct: 64  GIEIEILKKIAK---HEHFKYELKPMSFNGDLQALEAGQVDAVIAGMSVTDERKE--KYD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    Y  G    + K   I S+SQL G ++  ++GT+  L L +  K +  K     F+
Sbjct: 119 FSTPYYTSGVVMAVAKDSNIKSMSQLKGKTVSAKSGTSAALFLKNNQKKYGYK--IRYFD 176

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-E 236
               +    +                     +     ++    I   P+A    +G   E
Sbjct: 177 SSNTMWNDVKTGNT--VATFDDGPVLEYGIKEGVPLKIVTKKPIDAQPVAVGYQKGKNLE 234

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR-FLGIDKSSNIGEALGLTKDW 295
               ++     +    ++        +  K T      R  LG+ +++      GL   W
Sbjct: 235 LQKKMNDGIKWLKDTGQMDQIIDKYTKSDKTTKGSATDRTILGLIRANYPALLRGL---W 291

Query: 296 TYRIIRHMG 304
               +  +G
Sbjct: 292 MTIELTVVG 300


>gi|218662633|ref|ZP_03518563.1| extracellular solute-binding protein family 3 [Rhizobium etli
           IE4771]
          Length = 141

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            + +IK +G L  GI      +  V  +G   GFD D     +  +      +++ PL  
Sbjct: 30  TVEEIKAKGTLVVGIQGDNAPWGFVNTSGKQDGFDADIATLFAKELGVK---VEFQPLAV 86

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
             R  AL + ++DIL      T  R  S+  +   
Sbjct: 87  ANRIPALTTGKVDILFATMAMTEERAKSIQYSKPY 121


>gi|182677264|ref|YP_001831410.1| extracellular solute-binding protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633147|gb|ACB93921.1| extracellular solute-binding protein family 3 [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 292

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 66/219 (30%), Gaps = 15/219 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F     +G   GFD+D  RA+   +                   AL +
Sbjct: 59  TIRFLTEADWPPFHFTLDDGTLVGFDIDLARAICEDL---KLACTIQARRFDLLEPALAA 115

Query: 95  KQIDILSRNTDWTL-LREISL-GLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQ 151
           K+ D+L          R     G+AF    Y     F+  +   I ++ + L+G  I V+
Sbjct: 116 KEGDVLLAALRVDRATRPGPQSGIAFTAPYYTTPARFVTRRASPIEAIPEKLAGKRIGVE 175

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT  E  L  +F     +     F  + E   A R    DA  GD   L       D  
Sbjct: 176 QGTAHEAYLTAFFA----QVTRQPFPTLAEAQEALRNGSIDALFGDGITLALWLNGTDSQ 231

Query: 212 SE-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                              +  A+   D +    + +  
Sbjct: 232 DCCAFQGGPFTESAYFGEGIGMAMRTDDDDLRKALDYGL 270


>gi|54297467|ref|YP_123836.1| hypothetical protein lpp1512 [Legionella pneumophila str. Paris]
 gi|53751252|emb|CAH12663.1| hypothetical protein lpp1512 [Legionella pneumophila str. Paris]
          Length = 238

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 68/212 (32%), Gaps = 13/212 (6%)

Query: 36  LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G +     F      N    GFD+D  + +   +    +   +      + F AL++
Sbjct: 21  LTIGTSKFNPPFEVWSGNNSSLHGFDIDLMQEICRRL---HATCAFEAYIFDDLFPALKN 77

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +++D++  +   T  R+      F          +I      I++   L    I V+ GT
Sbjct: 78  RKVDLVIASMIITDERKKL--FIFSLPYMESNSQYITTIHSKINTFDDLQDKKIGVRKGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +     + N     I +E ++++      +  DA   D     A       P  +
Sbjct: 136 PYARQVL----SANRNNQVIFYELIQDMLLGLSNNEVDASLMDYE--AAKYWMASEPYAY 189

Query: 215 VILPDIISK-SPLAPAIIQGDTEWYNIVSWTH 245
            ++ + IS     +             ++   
Sbjct: 190 KLIGNKISIGEGYSIMANPDQYVLIKKINKIL 221


>gi|259907964|ref|YP_002648320.1| Cysteine transport protein (ABC superfamily) [Erwinia pyrifoliae
           Ep1/96]
 gi|224963586|emb|CAX55078.1| Cysteine transport protein (ABC superfamily) [Erwinia pyrifoliae
           Ep1/96]
 gi|283477850|emb|CAY73766.1| putative ABC transporter, extracellular solute-binding protein
           [Erwinia pyrifoliae DSM 12163]
          Length = 309

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 79/250 (31%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++     ++  +P + ++  L 
Sbjct: 60  GKFTVAVAALNSPPLTLFSDDNTTLLGSEVDIARLVADSLG---LQLNVVPTSWEDWPLG 116

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +    K   I+    ++G  I
Sbjct: 117 VSSGKYDAAITNVTVTKARKE--KFDFA-TYRRDSLGFYVKSDSKIAAITKAEDIAGLRI 173

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +  K    + P   +       A ++ R DAY G        
Sbjct: 174 IVGSGTNQEAILLAWEEQNQKKGLKPFVPNYVKDDAAQTLARQSGRADAYFGPNVIGAWK 233

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++ D+     V+     ++   E         + 
Sbjct: 234 AALTGKTRRVGTVDGGWPKAAHIAVTLKKDSGLVTAVNAALNGVIKGGEYDKVLNRWGEG 293

Query: 265 SKDTTNPDVQ 274
            +   + ++ 
Sbjct: 294 IERLDHSEIN 303


>gi|227326812|ref|ZP_03830836.1| octopine-binding periplasmic protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 289

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 38/239 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     + C + +  T  ++  +   + KK   ++         +   K +G   G +
Sbjct: 1   MIKSKLTLLACSLCMAGTLAASFTASAEE-KKWTTVRIATEGAYHPYNFTKPDGTLDGME 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + L + +     K + +         AL + + D +      T  R     + F  
Sbjct: 60  IELYKVLCNNM---QVKCEIMVQPFASAIPALNAGKYDAIIAGMSATAKR--REVIDFSQ 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------------------------LSGASICVQAGT 154
                GQ F + K   ++                              L G +I VQ+ +
Sbjct: 115 PYTQAGQTFAVLKSSSLAKDFPDAGVRFSIEPADEAKALAEVEKLKPLLEGKTIGVQSAS 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                L  Y K          ++  +E D   +A R D           LK T D+P  
Sbjct: 175 IASAFLDKYLK---GVMKVREYKTTQEHDLDLKAGRVDLVIASAP---YLKSTTDKPGN 227


>gi|307610253|emb|CBW99815.1| hypothetical protein LPW_15771 [Legionella pneumophila 130b]
          Length = 238

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 67/212 (31%), Gaps = 13/212 (6%)

Query: 36  LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G +     F      N    GFD+D  + +   +    +   +      + F AL+ 
Sbjct: 21  LTIGTSKFNPPFEVWSGNNSSLYGFDIDLMQEICRRL---HATCTFEAYIFDDLFPALKK 77

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +++D++  +   T  R+      F          +I      IS+   L G  I V+ GT
Sbjct: 78  REVDLVIASMIITDERKKH--FIFSLPYMESNSQYITTVDSKISTFDDLHGKKIGVRKGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +     + N     I +E ++++      +  DA   D     A       P  +
Sbjct: 136 PYARQVL----SENRNNQVIFYELIQDMLLGLSNNEVDASLMDYE--AAKYWMASEPYAY 189

Query: 215 VILPDIISK-SPLAPAIIQGDTEWYNIVSWTH 245
            ++   IS     +             ++   
Sbjct: 190 KLIGKKISIGEGYSIMANPDQFVLIKKINKIL 221


>gi|239820276|ref|YP_002947461.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239805129|gb|ACS22195.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 276

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 77/253 (30%), Gaps = 22/253 (8%)

Query: 6   FVSILCLIILFFTSFSTNA---SILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             S+  L IL     +  A    +      K+G L   IN  L     V   G  KG  V
Sbjct: 7   LASVAALFILGIGGANAQACKSPVPDAALVKKGTLTMSINPTLPPMQFVDQTGALKGMRV 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++  +   P    Y+ +        LQ+ + D+++    +T  R   + +     
Sbjct: 67  ELGEAIAKRLCLTPE---YVRIEFLAMIPGLQAGRWDVINTGIFYTDERARLMQML---P 120

Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----YHPIV 175
                      K     I     LSG SI V+ G   E    +  K    K         
Sbjct: 121 YEDQAISISTAKGNPLKIGKPEDLSGKSIGVEIGGFEERKARELDKQLTDKGLKGMTIRT 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE       A RA + +      S     +       +   +   +  +P+A A      
Sbjct: 181 FENFAMAFQALRAGQVEVALSIDSTGAEYQKR----GDFDRVLQGLFPTPVALAAKNK-- 234

Query: 236 EWYNIVSWTHYAM 248
           E    V+     M
Sbjct: 235 ELSLAVAKVLNDM 247


>gi|108797844|ref|YP_638041.1| extracellular solute-binding protein [Mycobacterium sp. MCS]
 gi|108768263|gb|ABG06985.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. MCS]
          Length = 269

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 52/194 (26%), Gaps = 12/194 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCR 65
              L L+    +S     S          +  G +      + +   + +  GF+ D  +
Sbjct: 3   AIALALVSACSSSTPAENSGAEADPASREIVIGTSGDFPPVSFLEDGSTEVVGFENDLAK 62

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +       ++  ++      ALQS +ID +      T  R     + F       
Sbjct: 63  GVTDDLGW---TYRFEQISFDGLLPALQSGRIDAILSGMYNTEKR--REQVDFIDYMQIP 117

Query: 126 GQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPIVFERV 179
                             L G S+     +  E    D +             P  F  V
Sbjct: 118 LSVLTTVDNAPKTPGPEALCGQSVAYLTASPPERAQLDAWSQQCTDSGKPPLQPTGFPSV 177

Query: 180 EEIDAAYRAHRCDA 193
            +   A    R  A
Sbjct: 178 AQGVNAVATGRVYA 191


>gi|328471237|gb|EGF42139.1| amino acid ABC transporter periplasmic amino acid-binding portion
           [Vibrio parahaemolyticus 10329]
          Length = 248

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTSNFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDERKA--KYLFADPYVIDGAQITVRKGNDSIKGVDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRQYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P E    P    ++       +   +    V+   
Sbjct: 188 TGLPLELAGEPFETIQNAWPFVNNEKGQKLQAEVNKAL 225


>gi|291568576|dbj|BAI90848.1| putative transporter [Arthrospira platensis NIES-39]
          Length = 401

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 81/265 (30%), Gaps = 30/265 (11%)

Query: 19  SFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           S S+ +  +  I  RG L   IN      F     +G+  G DV+  R ++ ++     +
Sbjct: 139 SSSSMSPDMQKIIDRGELIVAINQEDSPPFFAENVDGELIGLDVEIGRKIAKSLG---VQ 195

Query: 78  IQYLPL--NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----- 130
           +++        E    +     D+       TL R     ++F         G +     
Sbjct: 196 VRFDRSAKTFNEVVNRVYKGDADMAISKLSQTLERAKI--ISFSHPYLTMRHGLLLNRLQ 253

Query: 131 ----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                  K  +  +    G  I V   ++ E+     F         I +   E++    
Sbjct: 254 LTQATRNKDLVDFLRDFQG-KIGVINASSYEIFARAKFPKA----TIIRYSNWEDLIRGA 308

Query: 187 RAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 A   D   +  + +           +    ++ P+A A+          V+   
Sbjct: 309 MRGDILAAYRDELEVKKILINYPNVALNFQTVALTDTQDPIAIALPWSSNHLLQFVNLYL 368

Query: 246 YAMVTAEELGITQKNINQVSKDTTN 270
                   +   +  ++Q+ +D ++
Sbjct: 369 T-------MNDKKYTVSQLLEDYSD 386


>gi|254373649|ref|ZP_04989133.1| hypothetical protein FTDG_01657 [Francisella novicida GA99-3548]
 gi|151571371|gb|EDN37025.1| hypothetical protein FTDG_01657 [Francisella novicida GA99-3548]
          Length = 246

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 59/215 (27%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F  I  + ++  ++++              +  G       F+     +  + G 
Sbjct: 1   MKKTVFTFITAIAVMISSAYAD-------------ITVGTTGDYAPFSVYNPKDNKYSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A + +      +++++  +       L++ + D+       T  R+     +  
Sbjct: 48  DIKLIEAFAKS---KKEQVKFVKTSWATAENDLKNNKFDVFVGGMTITPERQKEFVFSNP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I++         K     + + +      V         +    K  N K   I     
Sbjct: 105 LISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENRGGTNQVFALQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
            +   +          D    D   +      N +
Sbjct: 163 NQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 197


>gi|256855202|ref|ZP_05560563.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|300862178|ref|ZP_07108258.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|256709715|gb|EEU24762.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|295112535|emb|CBL31172.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300848703|gb|EFK76460.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
          Length = 527

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 100/342 (29%), Gaps = 52/342 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K  F   L L+ LF     T        ++ G  + G+  G   F       A+G   
Sbjct: 1   MNKKVFSFSLLLVTLFSLLGMT---TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVP 57

Query: 57  -------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                   G+DV   + ++  +      +  +         ALQS +ID +      T  
Sbjct: 58  IQGNSYAGGYDVQISKKIADGLGRK---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAE 114

Query: 110 REISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           R+  +   F    Y      I+    K     ++  L+ A I  Q  T     +      
Sbjct: 115 RKKEIA--FTNPYYESQFVVIVKKDGKYANAKNLKDLADAKITAQLNTFHYGLIDQIPNV 172

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----II 221
           +  +      +    +  A  +   D Y  +          N          +       
Sbjct: 173 NKQQ----AMDNFSAMRTALASGMIDGYVSERPEGITATSVNKELKMLEFPKENGFDASA 228

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
             S +A  + +GD +    V+     +   E   I  + I      T + + +       
Sbjct: 229 EDSQVAVGMRKGDPDIEK-VNKILAGISQDERTKIMDQAIKDQPAATDSDEQKT------ 281

Query: 282 SSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
                   GL  D+   I      YG+MF R  G    L I 
Sbjct: 282 --------GLINDF-KNIWNQ---YGDMFLR--GAGLTLFIA 309


>gi|28896782|ref|NP_796387.1| amino acid ABC transporter periplasmic amino acid-binding portion
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|260876542|ref|ZP_05888897.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio parahaemolyticus AN-5034]
 gi|260897401|ref|ZP_05905897.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio parahaemolyticus Peru-466]
 gi|28804990|dbj|BAC58271.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087897|gb|EFO37592.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio parahaemolyticus Peru-466]
 gi|308090357|gb|EFO40052.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio parahaemolyticus AN-5034]
          Length = 248

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTSNFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDERKA--KYLFADPYVIDGAQITVRKGNDSIKGVDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRQYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P E    P    ++       +   +    V+   
Sbjct: 188 TGLPLELAGEPFETIQNAWPFVNNEKGQKLQAEVNKAL 225


>gi|304409392|ref|ZP_07391012.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS183]
 gi|307303750|ref|ZP_07583503.1| extracellular solute-binding protein family 3 [Shewanella baltica
           BA175]
 gi|304351910|gb|EFM16308.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS183]
 gi|306912648|gb|EFN43071.1| extracellular solute-binding protein family 3 [Shewanella baltica
           BA175]
          Length = 285

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 88/277 (31%), Gaps = 23/277 (8%)

Query: 12  LIILFFTSFSTNASILGDIKK----RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           ++ L   +     S L  +      +  +K G N     +A     G+ +G DVD  RA 
Sbjct: 9   VLFLLSLALPAQ-STLQ-VNSPLPCQKTIKVGYN-DWPPYAWQDPQGEAQGLDVDLMRAF 65

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +      I ++ + AK     L++ Q+D+L      T  R+      F      +  
Sbjct: 66  AVYLGCK---INFINVPAKRSHQMLKAGQLDVLMGA-TMTDERQAY--AHFSSYYRDEEL 119

Query: 128 GFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH--PIVFERVEE 181
                     +  +     +    + +   ++    +      + ++     ++    ++
Sbjct: 120 RLFVLDEQKDQINVDKWEDIFTKKLRLLVPSSGWYGVDYQESQYRLEQEHLLVLSPDSDK 179

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYN 239
                   R D   GD  A+  +   +    + V L  ++ ++ +   + +         
Sbjct: 180 SVQMLTYGRGDMIVGDTMAMPYIASQHQH-IKLVPLKLVLDQNHIHLMLSKASMTPSQLE 238

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
             +    A++   E+     N  Q        ++ R 
Sbjct: 239 QFNQAIKALMDNGEIA-RVINKWQQMSLAKQSNMSRL 274


>gi|220925013|ref|YP_002500315.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219949620|gb|ACL60012.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 294

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 60/202 (29%), Gaps = 35/202 (17%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         +   K +G   G++++  R +           +++  +       LQ+
Sbjct: 39  VVRIATEGAYAPYNFTKPDGSLDGYEIELAREVCRRA---KLTCEFVVQDWDGVVPGLQA 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-------------FIMHKKKGISSVS 141
           K+ D +      T  R     + F      D  G                 K    +  +
Sbjct: 96  KKFDAIMSGMTITDARLKV--IDFTRPYSSDFSGLAVDRNGPLARLPLADRKLSLTADEA 153

Query: 142 Q-----------LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           Q           L G ++ VQ  T     L  Y K          ++  E+ D    A R
Sbjct: 154 QAVKAIDEIKPLLKGMAVGVQVSTIHAAFLDKYLK---GTVEIREYKTTEQHDLDLAAGR 210

Query: 191 CDAYTGDISALYALKLTNDRPS 212
            DA   +      L+ T ++P 
Sbjct: 211 IDAIFAND---AVLRATAEKPE 229


>gi|269965279|ref|ZP_06179400.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
 gi|269830080|gb|EEZ84308.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
          Length = 248

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDERKA--KYLFADPYVVDGAQITVRKGNDSIKGVDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRQYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P E    P    ++       +   +    V+   
Sbjct: 188 TGLPLELAGEPFETIQNAWPFVENEKGRKLQEEVNKAL 225


>gi|222082849|ref|YP_002542214.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727528|gb|ACM30617.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 278

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 21/259 (8%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKAN 53
           M++       +    ++  TSF+   S    +        G L    N  L     + ++
Sbjct: 1   MFRIQLSRGILAASFLVLTTSFALAQSCTPKVAAGELITPGKLVMSTNPTLPPLQFIDSS 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           GD KG  V+    ++  +  +P    Y+ +        LQ+ + D+++    +T  R   
Sbjct: 61  GDLKGMRVELGTEIAKRLCLEPE---YVRIEFSAMVPGLQAGRWDMINTGIFFTEERAKI 117

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ----AGTTTELTLADYFKAHNM 169
           + +               +  K ++S   L+G +I V+      T T L   +   A   
Sbjct: 118 MQMI-PYEDQAISVSVAPNSDKKVASKDDLAGMTIGVEIGGFEETKTRLLDKELRDAGKK 176

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
                 F+       A RA + D      +             +       +  +P+A A
Sbjct: 177 GLTIQTFDNFALAYQALRAGQVDGVVSIDAVAKDYDAR----GDFKRALSGLYPAPVAVA 232

Query: 230 IIQGDTEWYNIVSWTHYAM 248
                    + VS T   M
Sbjct: 233 FKS--PALADAVSATLKEM 249


>gi|218514814|ref|ZP_03511654.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
          Length = 248

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 72/220 (32%), Gaps = 14/220 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GF+VD  R +   +     K Q   +   +   AL + 
Sbjct: 17  LRFLTSVDFPPFNFTDQNGKLSGFNVDLAREICGELEIS-DKCQIQAIPFADLKDALAAS 75

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+ +       ++ + L+G  + V  G
Sbjct: 76  QGDAVIAGLAVTP--ELRRRFVFSRPYLMLPARFVRNLAAPVEANTAAALAGRPVGVVKG 133

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  LA +F A   +     F+  E + AA +  + DA   D         +      
Sbjct: 134 TVHEAMLAAFFPALKAE----PFDTKEALLAALKERKVDAAFADALQFSFWVSSPASDKC 189

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +   L +      +   + Q D+   + +     A+
Sbjct: 190 CALFDGPYLSEHFLGEGMTIMLRQKDSVLTSAIDHALAAL 229


>gi|269104574|ref|ZP_06157270.1| putative amino acid ABC transporter [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161214|gb|EEZ39711.1| putative amino acid ABC transporter [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 221

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 57/195 (29%), Gaps = 6/195 (3%)

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                G+  GF+VD  R ++        KI+++P        AL + + D++      T 
Sbjct: 1   MRDKQGELIGFEVDVARRVAQDAG---LKIEFIPTAWDGIIPALLAGKFDVIIGGLSITP 57

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R  +L + F       G      KK      +        V              K + 
Sbjct: 58  QR--NLNVLFTVPYAHSGVQLAASKKSAADKTTIADYNKRSVTLAVRRGAVTVQTAKKYF 115

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
            K     F+   +          DA          + +        +   + +++     
Sbjct: 116 PKAKLRQFDDESQAFQEVLNGNADAVLASSPKPEQMAIQYKDKL-FIPFKENLNRGSEGF 174

Query: 229 AIIQGDTEWYNIVSW 243
           A+ QG+ +  N  + 
Sbjct: 175 ALRQGEFDLLNFFNN 189


>gi|254246852|ref|ZP_04940173.1| Extracellular solute-binding protein, family 9 [Burkholderia
           cenocepacia PC184]
 gi|124871628|gb|EAY63344.1| Extracellular solute-binding protein, family 9 [Burkholderia
           cenocepacia PC184]
          Length = 264

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 3/88 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  IK  G  + G       F      G   GFDVD   A++  +   P   Q++   
Sbjct: 25  DDLSQIKSAGVFRVGTEGTYAPFTYHDETGKLTGFDVDIATAIAQRLGVKP---QFVEGK 81

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREI 112
                  L   + + +      T  R+ 
Sbjct: 82  WDGLIAGLDVNRYEAVFNEVSITDARKA 109


>gi|313113961|ref|ZP_07799517.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623724|gb|EFQ07123.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 275

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 67/212 (31%), Gaps = 12/212 (5%)

Query: 28  GDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            + K  G   +  G +     +  +  +G   G DV+        +       ++  +N 
Sbjct: 32  KEAKDSGLAQIVVG-SDSYPPYIYLNNDGVPTGIDVEIATEAFRRMGY---AARFETINW 87

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           +++   ++S  ID +         RE               Q   +     I S+S L+G
Sbjct: 88  EQKTNLVESGAIDCIWGCFSM-DGREEVYRW--AGPYMVSRQVVAVDAHSSIRSLSDLAG 144

Query: 146 ASICVQAGTTTELT-LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            ++ VQ+    E   L+            +  E      A       D      + +  L
Sbjct: 145 KTVAVQSTGKPEEIFLSGSDPRIPQTVEVLSIENRSVQYAMLACGYVDGIAAHETGI--L 202

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   D   +  IL + +  + L  A  + DT 
Sbjct: 203 QYMKDNAIDFRILEEPLLVTGLGIAFAKNDTR 234


>gi|218662174|ref|ZP_03518104.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           IE4771]
          Length = 280

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 74/265 (27%), Gaps = 43/265 (16%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F  S L  +I    + +              +          +     +G   GF++D
Sbjct: 5   KLFLTSALLGVISAGAAVAQTKPT--------EITIATEGAYEPWNFSGPDGKLAGFEID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L + +     K   +  +      +L +K+ D +  +   T  R     ++F    
Sbjct: 57  LANDLCARM---KVKCTIVAQDWDGLIPSLTAKKFDAIMASMIVTEKRLAV--ISFSKPY 111

Query: 123 YFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTTEL 158
                 F++ K   ++ +                          L G ++  Q  T    
Sbjct: 112 APTAATFMVEKSGPLADLPGTGTTVDLAADKAKVEQELQPLRDALKGKAVGAQVSTANAA 171

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT---GDISALYALKLTNDRPSEHV 215
            L  YFK           E+ +      +A R DA       ++A        D      
Sbjct: 172 FLDSYFKGVVDPREYKTVEQHD---LDLQAGRIDAVVAQKTSLTATLGKDDFKDYKIAGP 228

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNI 240
                +    +A  I + DT   ++
Sbjct: 229 TFKGGVFGQGIAAGIRKDDTVLKSM 253


>gi|159906012|ref|YP_001549674.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159887505|gb|ABX02442.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 247

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 84/250 (33%), Gaps = 17/250 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     IL + ++  +   +N+  +        +  G+   +     + A G   GF+
Sbjct: 1   MLKFNISIILTVFLILISGCLSNSEHIEK----ETMVVGVTPEIYPINYMDA-GVHSGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +++   ++  +   P    +          A+++ ++D        T  RE    + F  
Sbjct: 56  IEYITEIAERMDMKPE---FRIYEFMNLLNAVETNRVDCAISLITVTPEREEL--VIFSK 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   +++ +  G  +   L   +I V   T  +            ++    +    
Sbjct: 111 SYLNTTSIWVVDRNTGAET---LDNGTIGVIKSTVQDGCAIRL--KEKQEFTIYKYRTAA 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++ A+   + +A   D   +Y   + +   +    + +      ++ A+   +TE  N 
Sbjct: 166 ELERAFDQGKINAMIVDK--IYFEYVLHPENNNLTSIFECPLGENISIAVNNENTELLND 223

Query: 241 VSWTHYAMVT 250
           ++     M  
Sbjct: 224 INNIITEMDE 233


>gi|209547564|ref|YP_002279482.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538808|gb|ACI58742.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 311

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     ++ G    A          G D D+  A++ ++      ++ +P+   +  L L
Sbjct: 62  GKFTIAVSPGGPPLATYATDAKTVVGADPDYAYAIADSLG---LTLEIVPVAWIDWPLGL 118

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+S       +G  I 
Sbjct: 119 ASGKYDAVISNVGVTEQRKE--KFDFS-TYRQGLHGFFVKSDSPITSIKQPKDAAGLRII 175

Query: 150 VQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L  +      A         ++       A R+ R D      + L  + 
Sbjct: 176 VGAGTNQERILVKWSDEDVAAGLKPIELQYYDDEAASLLALRSGRADVIVQPHAQLVFIA 235

Query: 206 LTNDR 210
             +  
Sbjct: 236 ARDKN 240


>gi|254464219|ref|ZP_05077630.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacterales bacterium Y4I]
 gi|206685127|gb|EDZ45609.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacterales bacterium Y4I]
          Length = 235

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 52/197 (26%), Gaps = 27/197 (13%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +    L +      +              ++ G       +  V   G+  GF+ +
Sbjct: 2   KSLILGTAALALSAGMGLAE------------TVRLGTEGAYAPWNFVNDAGEIDGFERE 49

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L           +++  +       L S   D +      T  R+    + F    
Sbjct: 50  LGDELCKRA---ELTCEWVKNDWDSIIPNLVSGNYDTIIAGMSITDERDEV--IDFTQPY 104

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                     +   +     L    I  QA T     +A+        +  + F   EE 
Sbjct: 105 TPPDPSAYAAQSADV----DLESGVIAAQATTIQAAFVAE------QGWTLVEFATPEET 154

Query: 183 DAAYRAHRCDAYTGDIS 199
            AA R    DA   D S
Sbjct: 155 VAAVRNGEADAVLADKS 171


>gi|255527440|ref|ZP_05394313.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296187469|ref|ZP_06855864.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
 gi|255508886|gb|EET85253.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|296047991|gb|EFG87430.1| bacterial extracellular solute-binding protein, family 3
           [Clostridium carboxidivorans P7]
          Length = 269

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 1   MYKDFF-VSILCLIILFFTSFSTNASILGDIKK-RGFLKCGINTGLVGFAEVKANGDWKG 58
           M K F  ++++  + +     S  +S           +K  +      F  + ANG+  G
Sbjct: 1   MKKIFVSLALITTLAVGAAGCSKQSSNSSSSSSSAKVVKIAVVNDAKPFTYIDANGEASG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D +  + +S  +       ++  ++     L ++S + D+ + +   +  RE       
Sbjct: 61  YDAEVLKEVSKKLTKYKF--EFNGMSQSALLLGVESGKYDLGTCHFYKSPEREQKYLFPD 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASI----CVQAGTTTELTLADYFKAHNMKYHPI 174
            P    D +      +  I+++  L G  +       A  T      +      +    I
Sbjct: 119 EPFGLSDLKIVTKKDRNDINTMDDLVGKKLEPIPANDARYTVIKEYNEKHPDKQVNLQSI 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 +      + + DA     +A  A++ +    +  V L   ++K P    + + D
Sbjct: 179 EALNTADSFKLIASGQYDAAVYPSAAFPAVQKSL---NLDVKLTGTVTKVPTYFVLNKKD 235

Query: 235 TEWYNIVSWTHY 246
           TE    +     
Sbjct: 236 TELKTDIDKVLK 247


>gi|1709588|sp|P52626|PATH_VIBHA RecName: Full=Putative amino-acid ABC transporter-binding protein
           patH; Flags: Precursor
 gi|1006568|gb|AAA78256.1| binding protein precursor [Vibrio harveyi]
          Length = 248

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 79/218 (36%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIQGVEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L DY K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRDYDK--DGKINIKTYDTGIE--HDVALGRADAFIMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P +    P    ++       +   +    V+   
Sbjct: 188 TGLPLQLAGEPFETIQNAWPFVDNEKGRKLQAEVNKAL 225


>gi|148360669|ref|YP_001251876.1| arginine ABC transporter, periplasmic binding protein [Legionella
           pneumophila str. Corby]
 gi|148282442|gb|ABQ56530.1| arginine ABC transporter, periplasmic binding protein [Legionella
           pneumophila str. Corby]
          Length = 250

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 23/249 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F   +L       +        +        L  G+      F     N +  G+D
Sbjct: 1   MK--FIQGLLLSFFFLVSPLHAQNEPIP-------LIIGVGGFYPPFIMQGTNNELFGYD 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +     L   +     +  +  +  ++   AL +KQID        T  R  S  + F  
Sbjct: 52  IATMTELCKIM---KRQCNFRVMRFRQLIPALINKQIDAAISAMSITSER--SNLVNFSM 106

Query: 121 ITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                   F+ ++         L    G  I V+  T     +        +    + F+
Sbjct: 107 PYLLSYSRFLTNEVHNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRM---GIIDPVIVEFD 163

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
           R EE+  A  A++ D    D     AL  + +     +++   +     L  A+ + ++ 
Sbjct: 164 RTEEMLEALSANKIDFVLMDNP--AALYWSANSSGRLLVIGSPMLIGYGLGIAVNRENSV 221

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 222 LLKSLNDAL 230


>gi|298717430|ref|YP_003730072.1| ABC transport system periplasmic solute-binding protein [Pantoea
           vagans C9-1]
 gi|298361619|gb|ADI78400.1| Putative ABC transport system, periplasmic solute-binding protein
           precursor [Pantoea vagans C9-1]
          Length = 313

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 15/178 (8%)

Query: 34  GFLKCGIN-TGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++     K+  +P + ++  L 
Sbjct: 64  GSFTVAVAAQNSPPLTVFSDDNKTLLGSEVDIARLVADSLG---LKLNIVPTSWEDWPLG 120

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I S      ++G  I
Sbjct: 121 VASGKYDAAISNITVTKERKE--KFDFA-TYRKDSLGFYVKTSSPIQSLTKAEDIAGLRI 177

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            V +GT  E  L  + K +  K    + P+  +       A +A R DAY G      
Sbjct: 178 IVGSGTNQEAILLAWDKENQAKGLKAFTPVYTKDDAAQTLALQAGRADAYFGPNVIGA 235


>gi|261366634|ref|ZP_05979517.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Subdoligranulum variabile DSM 15176]
 gi|282571453|gb|EFB76988.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Subdoligranulum variabile DSM 15176]
          Length = 307

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 82/303 (27%), Gaps = 54/303 (17%)

Query: 2   YKDFFVSILCLIILFFTSFS---------------------TNASILGDIKKRG---FLK 37
            K   + +  L+                             T A         G    L 
Sbjct: 4   KKTLSLCLAALLTAGLVGCGSTATTDSTAASDSAASTAETGTEADTTAAPDGDGDPTTLT 63

Query: 38  CGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIFDDPSKIQYLPLNA 85
             +      +       +NG  +         G+DV   + ++ A+      +Q + L+ 
Sbjct: 64  VAMECAYAPYNWTQSDDSNGAVQIRDSSDYAYGYDVMMAKKIAEALG---QNVQVVKLDW 120

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQ 142
                A+ S  +D +      T  R  +  + F    Y+     ++ K        SV+ 
Sbjct: 121 DSLIPAVMSGDVDCVIAGQSITSER--AQQVDFSDPYYYASIITLVKKDGPYANAKSVAD 178

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           LSGA+   Q GT             N+       E    +  A  +  CD    D     
Sbjct: 179 LSGATCTSQLGTIWYDNCLPQIPDANILP---AQETAPAMLVALNSGACDVVVTDRPTAQ 235

Query: 203 ALKLTNDRPSEHVILPDIISKS------PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           A  +                         +  ++ +G+T   + ++    A +T ++   
Sbjct: 236 AALVAYPDFVALDFGGGDEDFQVSDEDINIGISMKKGNTALKDAINGVL-ATMTTDDYNT 294

Query: 257 TQK 259
              
Sbjct: 295 MMD 297


>gi|257088688|ref|ZP_05583049.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|256997500|gb|EEU84020.1| ABC amino acid transporter [Enterococcus faecalis CH188]
          Length = 507

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 91/316 (28%), Gaps = 51/316 (16%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 3   TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 62

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 63  ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 117

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     ++  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 118 GKYANAKNLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 173

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 174 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 232

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 233 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 274

Query: 307 GEMFDRNLGNQSELKI 322
           G+MF R     + L +
Sbjct: 275 GDMFLR----GTGLTL 286


>gi|239834903|ref|ZP_04683231.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239822966|gb|EEQ94535.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 309

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 59/185 (31%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L   +  G     +         G D ++  A++ ++     +++ +P+   +  L L
Sbjct: 59  GNLTVAVAPGGPPLASYATDARTVVGADPEYASAIAESLG---LQLELVPVAWIDWPLGL 115

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASIC 149
            S + D +  N   T  R+      F         GF +        I      +G  I 
Sbjct: 116 ASGKYDAVISNVGVTEERKE--KFDFS-TYRQGLHGFFVKSDSPFTSIKEPKDAAGLRII 172

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L  + + +            ++       A R+ R D      + L  + 
Sbjct: 173 VGAGTNQERILVKWSEENVAAGLKPIDLQYYDDEAASLLALRSGRADVIVQPHAQLVFIA 232

Query: 206 LTNDR 210
             +  
Sbjct: 233 ARDKN 237


>gi|290890240|ref|ZP_06553319.1| hypothetical protein AWRIB429_0709 [Oenococcus oeni AWRIB429]
 gi|290480026|gb|EFD88671.1| hypothetical protein AWRIB429_0709 [Oenococcus oeni AWRIB429]
          Length = 356

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 93/323 (28%), Gaps = 57/323 (17%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-------- 56
             +SIL  I+L F+ F T  +       +     G+      F   + N           
Sbjct: 10  LSISILAGILLIFSVFPTEKAAAAKKDDK-VFLVGMEANYPPFNWTQQNKKHGAVPIQGS 68

Query: 57  ----KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G+DV   + ++  +     ++  +         AL SK+ID +      T  RE 
Sbjct: 69  NLYANGYDVQIAKKIAKKLGK---RVVVVKTEWDGLLPALTSKKIDAIIAGMTPTPEREK 125

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +  + F    Y   Q  +++K        ++S   GA +  Q  T     +        +
Sbjct: 126 T--IDFTKPYYNSKQIIVVNKNSKYAKAKTLSDFKGAKLTAQLSTVQYSLIKQI---KGV 180

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-------HVILPDIIS 222
              P   +    +  A  +   D Y  ++    ++ + +   +           L    S
Sbjct: 181 IKEP-AMKDFASMRVALESKTIDGYVAELPEGLSMAVADPNATYVELSGKKGFKLNSTES 239

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282
           +  +     + +      ++     +       +    +    + TT  +          
Sbjct: 240 QEAIGL---RKNDPNETKINQILSGISLKTRTKLMHDAVLNQPQATTQGN---------- 286

Query: 283 SNIGEALGLTKDWTYRIIRHMGN 305
                       W   I +  GN
Sbjct: 287 ------------WFINIWKQYGN 297


>gi|221196250|ref|ZP_03569297.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2M]
 gi|221202923|ref|ZP_03575942.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2]
 gi|221176857|gb|EEE09285.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2]
 gi|221182804|gb|EEE15204.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           multivorans CGD2M]
          Length = 178

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%)

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            F   K  G+     L+G ++   AGT+ E  L    +   M    I  +   E      
Sbjct: 12  RFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVT 71

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
             R  A+      LY     +  P  + +    +     A  + + D  +  +V      
Sbjct: 72  TGRAVAFVMAEPLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDDPAFKRVVDGVIAK 131

Query: 248 MVTAEELG 255
           M T+ E  
Sbjct: 132 MQTSGEAE 139


>gi|255974748|ref|ZP_05425334.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256964171|ref|ZP_05568342.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis HIP11704]
 gi|255967620|gb|EET98242.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256954667|gb|EEU71299.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis HIP11704]
          Length = 507

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 91/317 (28%), Gaps = 49/317 (15%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEV---KANGDW--------KGFDVDFCRALSSAIFDD 74
                ++ G  + G+  G   F       A+G           G+DV   + ++  +   
Sbjct: 3   TNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQGNSYAGGYDVQISKKIADGLGRK 62

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132
              +  +         ALQS +ID +      T  R+  +   F    Y      I+   
Sbjct: 63  ---LVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA--FTNPYYESQFVVIVKKD 117

Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K     ++  L+ A I  Q  T     +      +  +      +    +  A  +   
Sbjct: 118 GKYANAKNLKDLADAKITAQLNTFHYGLIDQIPNVNKQQ----AMDNFSAMRTALASGMI 173

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D Y  +          N          +         S +A  + +GD +    V+    
Sbjct: 174 DGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKGDPDIEK-VNKILA 232

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            +   E   I  + I      T + + +               GL  D+   I      Y
Sbjct: 233 GISQDERTKIMDQAIKDQPAATDSDEQKT--------------GLINDF-KNIWNQ---Y 274

Query: 307 GEMFDRNLGNQSELKIP 323
           G+MF R  G    L I 
Sbjct: 275 GDMFLR--GAGLTLFIA 289


>gi|116490803|ref|YP_810347.1| ABC-type amino acid transport system, permease and periplasmic
           component [Oenococcus oeni PSU-1]
 gi|116091528|gb|ABJ56682.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Oenococcus oeni PSU-1]
          Length = 545

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 93/323 (28%), Gaps = 57/323 (17%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-------- 56
             +SIL  I+L F+ F T  +       +     G+      F   + N           
Sbjct: 20  LSISILAGILLIFSVFPTEKAAAAKKDDK-VFLVGMEANYPPFNWTQQNKKHGAVPIQGS 78

Query: 57  ----KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G+DV   + ++  +     ++  +         AL SK+ID +      T  RE 
Sbjct: 79  NLYANGYDVQIAKKIAKKLGK---RVVVVKTEWDGLLPALTSKKIDAIIAGMTPTPEREK 135

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +  + F    Y   Q  +++K        ++S   GA +  Q  T     +        +
Sbjct: 136 T--IDFTKPYYNSKQIIVVNKNSKYAKAKTLSDFKGAKLTAQLSTVQYSLIKQI---KGV 190

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-------HVILPDIIS 222
              P   +    +  A  +   D Y  ++    ++ + +   +           L    S
Sbjct: 191 IKEP-AMKDFASMRVALESKTIDGYVAELPEGLSMAVADPNATYVELSGKKGFKLNSTES 249

Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282
           +  +     + +      ++     +       +    +    + TT  +          
Sbjct: 250 QEAIGL---RKNDPNETKINQILSGISLKTRTKLMHDAVLNQPQATTQGN---------- 296

Query: 283 SNIGEALGLTKDWTYRIIRHMGN 305
                       W   I +  GN
Sbjct: 297 ------------WFINIWKQYGN 307


>gi|269966585|ref|ZP_06180666.1| putative glycosylase [Vibrio alginolyticus 40B]
 gi|269828770|gb|EEZ83023.1| putative glycosylase [Vibrio alginolyticus 40B]
          Length = 484

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 84/251 (33%), Gaps = 12/251 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              + +C + +           L  IK++  L+  ++  L GF  +   G  KG   +  
Sbjct: 4   LLSASVCALQISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTPKGIGAELL 61

Query: 65  RALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
                 +        +Q +PL   +   AL++   D++  N   T  R+  +  +   +T
Sbjct: 62  AHFEKDLRKLKPKLNVQIIPLARDQLLPALENGSGDLVVANLTITNTRKQKVDFSSPILT 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFERVEE 181
             D           ++++ QLSG  + V+A ++   ++    K  +     P+V   +EE
Sbjct: 122 GIDEWIVTNKSTPAMTNIEQLSGKEVWVRASSSYFESIQALNKKLNKKGLPPVVVHFIEE 181

Query: 182 IDAA------YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                            A   D           D    H  +P   +   +A A+ +   
Sbjct: 182 TLQDYELVGMLNNGYVKAIVLDSHKAKLWLKVMDDIRAHPEIPIRENGK-IAWAMRENSP 240

Query: 236 EWYNIVSWTHY 246
               +V+    
Sbjct: 241 SLKAVVNKFIQ 251


>gi|255029929|ref|ZP_05301880.1| hypothetical protein LmonL_14234 [Listeria monocytogenes LO28]
          Length = 92

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 1  MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
          M K   ++++ +++L   + S++ S       IKK   +  G++   V       + +  
Sbjct: 1  MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60

Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
          GFD+D  +A+ +         ++ P++   +   L
Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESEL 92


>gi|91228350|ref|ZP_01262278.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio alginolyticus 12G01]
 gi|91188110|gb|EAS74414.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio alginolyticus 12G01]
          Length = 248

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDERKA--KYLFADPYVVDGAQITVRKGNDSIKGVDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRQYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P E    P    ++       +   +    V+   
Sbjct: 188 TGLPLELAGEPFETIQNAWPFVDNEKGRKLQEEVNKAL 225


>gi|260575756|ref|ZP_05843753.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
 gi|259022154|gb|EEW25453.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
          Length = 240

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 62/221 (28%), Gaps = 16/221 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++         F  +   G+  GF+ +F   +         +  +           LQS
Sbjct: 22  VVRLATEGAYPPFNLIDDKGEIGGFEREFGDEICKRA---ALECTWSTNEWDSIIPNLQS 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D++      T  R+    + F    Y       +  K    + +     ++  Q  T
Sbjct: 79  GNYDVIIAGMSITDERKKV--IDFSDNYYPPVPSVYVAAK----ADANYQTGTVAAQVST 132

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +A            + +   +E  AA R    DA   D   L  L   +      
Sbjct: 133 IQAAFIAA------SGATLLEYPTPDETVAAVRNGEADAVFADFDYLNPLVKESGGALMV 186

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           V  P  I    +   + Q D E    ++    AM     L 
Sbjct: 187 VGEPVAIGGG-VGLGLRQSDQELKGKLNVAIAAMKADGSLN 226


>gi|163856319|ref|YP_001630617.1| putative amino acid-binding periplasmic protein [Bordetella petrii
           DSM 12804]
 gi|163260047|emb|CAP42348.1| putative amino acid-binding periplasmic protein [Bordetella petrii]
          Length = 250

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 75/216 (34%), Gaps = 13/216 (6%)

Query: 35  FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            LK G       F  +       +G  VD  +A+          +Q  P+       +L 
Sbjct: 25  VLKVGSTPTGSPFTFLDTKTNTIEGVMVDIIKAVGKEAG---FGVQIEPMAFSALIGSLT 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQ 151
           SK+ID++S     T  R+    ++F    Y  G+GF++ K       S + + G ++ VQ
Sbjct: 82  SKRIDLISAAMFITEPRQKV--VSFSQPVYRYGEGFMVPKGDDKQYKSFADMKGMTVGVQ 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT     + +      M     +++   ++     A R      D     ++      P
Sbjct: 140 VGTAFVAPIQNS----GMFKEVKLYDNPPDMMRDANAGRIQGGFMDYPIAASIIAKGAYP 195

Query: 212 S-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           + +     + I    L  A  + DTE    +     
Sbjct: 196 NLKMAKSYEPIVVGSLGIATRKEDTELLARIDKALT 231


>gi|170741791|ref|YP_001770446.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168196065|gb|ACA18012.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 282

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 78/219 (35%), Gaps = 13/219 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
               +++   L+ G   G   +     A+G WKGF +D C+AL+  +  +   +      
Sbjct: 37  TFERVRRTRKLRIGAVNGGAPYYYRDLASGQWKGFYIDICKALADELECE---LDVTETT 93

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
                L LQ+ + D+           + +L + F    + +   FI  K     + ++++
Sbjct: 94  WGNSVLDLQAGKTDVFFG---LNPTPKRALVVDFSVPVFANAFTFITRKGFERKTWAEMN 150

Query: 145 GA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                I V AG++ +  +                +  ++  AA +A R DA         
Sbjct: 151 DPAVRIAVDAGSSHDAVVTRLAPKA----QITRLKGADDATAALQAGRVDAQCLVFILSL 206

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
            +   N    +  +   I S +  A    + D  W + V
Sbjct: 207 TVLKKNPALGQFTLPTPIFSTTSNAGFRREADKTWRDYV 245


>gi|118496805|ref|YP_897855.1| polar amino acid uptake transporter [Francisella tularensis subsp.
           novicida U112]
 gi|194324514|ref|ZP_03058286.1| bacterial extracellular solute-binding protein, family 3
           [Francisella tularensis subsp. novicida FTE]
 gi|118422711|gb|ABK89101.1| polar amino acid uptake transporter [Francisella novicida U112]
 gi|194321349|gb|EDX18835.1| bacterial extracellular solute-binding protein, family 3
           [Francisella tularensis subsp. novicida FTE]
          Length = 246

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 59/215 (27%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F  I  + ++  ++++              +  G       F+     +  + G 
Sbjct: 1   MKKTVFTFITAIAVMISSAYAD-------------ITVGTTGDYAPFSVYNPKDNKYSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A + +      +++++  +       L+S + D+       T  R+     +  
Sbjct: 48  DIKLIEAFAKS---KKEQVKFVKTSWATAENDLKSNKFDVFVGGMTITPERQKEFVFSNP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I++         K     + + +      V         +    K  N K   I     
Sbjct: 105 LISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENRGGTNQVFALQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
            +   +          D    D   +      N +
Sbjct: 163 NQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 197


>gi|325265756|ref|ZP_08132443.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Kingella denitrificans ATCC 33394]
 gi|324982739|gb|EGC18364.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Kingella denitrificans ATCC 33394]
          Length = 226

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 11/204 (5%)

Query: 45  VGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF-LALQSKQIDILSR 102
               A V   G   GF+ D  +A+++         +Y  +++K+    AL+S + DI + 
Sbjct: 8   PPMVAYVD--GKITGFEYDLLQAIAAKKG---ISFEYQVVDSKKDLLPALESGKADIAAG 62

Query: 103 NTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                  R     + F  PI  +     +        S + L G S+ V  GT  +   A
Sbjct: 63  AITINDER--RQKVNFSEPILDYSAAVLVDKSLADAKSFADLKGKSVAVGRGTVYDKMAA 120

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           DY  A     + + ++ V E       H+     GD   L      N       +     
Sbjct: 121 DYL-ASGDGKNIVYYDTVWEQVKNLLNHQTQVVLGDSLILEYYLQQNGSHQAVFVQNISF 179

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245
            K     A+ + +TE    ++   
Sbjct: 180 PKENYGFALAKNNTELQQEINDGL 203


>gi|328676265|gb|AEB27135.1| Cyclohexadienyl dehydratase Periplasmic precursor [Francisella cf.
           novicida Fx1]
          Length = 246

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 59/215 (27%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F  I  + ++  ++++              +  G       F+     +  + G 
Sbjct: 1   MKKTVFAFITAIAVMISSAYAD-------------ITVGTTGDYAPFSVYNPKDNKYSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A + +      +++++  +       L+S + D+       T  R+     +  
Sbjct: 48  DIKLIEAFAKS---KKEQVKFVKTSWATAENDLKSNKFDVFVGGMTITPERQKEFVFSNP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I++         K     + + +      V         +    K  N K   I     
Sbjct: 105 LISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENRGGTNQVFALQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
            +   +          D    D   +      N +
Sbjct: 163 NQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 197


>gi|260774980|ref|ZP_05883880.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260609070|gb|EEX35229.1| amino acid ABC transporter amino acid-binding portion [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 248

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 11/218 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  V+ +   +GF+VD    +      +  K++Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVQQD-KLQGFEVDLWDEIGKR---NDYKVEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIQGIKDLEGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L +Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRNYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P +    P    ++           +    V+   
Sbjct: 188 TGLPLQLAGEPFETIQNAWPFVDNDNGKKLQAEVNKAL 225


>gi|239627707|ref|ZP_04670738.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239517853|gb|EEQ57719.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 336

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 72/255 (28%), Gaps = 29/255 (11%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW---------KGFD 60
                 S  ++A       ++  L+  +      +       ANG            G+D
Sbjct: 68  AAATEASGESDAGAAEASGEKKTLRVAMECAYAPYNWTQPDDANGAVPIADSNEFAYGYD 127

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V   + +   +  D   ++ + L+      A+ + ++D +      T  R     + F  
Sbjct: 128 VMMAKKICEELGYD---LEIVRLDWDSLIPAVTTGKVDCVIAGQSITSER--LQAVDFTE 182

Query: 121 ITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
             Y+     ++    K     SV+ L+GA+   Q  T    T                  
Sbjct: 183 PYYYATIVTLVKEGSKYADAKSVADLAGATCTSQQSTIWYNT---CLPQIEGANVLAATA 239

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI------LPDIISKSPLAPAII 231
              ++  +  A +CD    D        +                         +  ++ 
Sbjct: 240 SAPDMLMSLNADKCDLVVTDQPTGKGALVAYPNFRMLEFGGGADDFQVTEEDINIGISLK 299

Query: 232 QGDTEWYNIVSWTHY 246
           +G+TE    ++    
Sbjct: 300 KGNTELQEAINSVLT 314


>gi|15967000|ref|NP_387353.1| putative amino acid-binding periplasmic (signal peptide) ABC
           transporter protein [Sinorhizobium meliloti 1021]
 gi|307302468|ref|ZP_07582225.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|307316202|ref|ZP_07595646.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|15076273|emb|CAC47826.1| Putative amino acid-binding periplasmic (signal peptide) ABC
           transporter [Sinorhizobium meliloti 1021]
 gi|306898042|gb|EFN28784.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306903138|gb|EFN33728.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 269

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 75/256 (29%), Gaps = 16/256 (6%)

Query: 2   YKDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
            +     I  ++ + F  S    AS L D      +             V    G   G+
Sbjct: 4   RRHVLAGIAAVLAVPFAVSAPVFASDLPD-LGGKTVVVVTENAYPPLQFVDPKSGQAIGW 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D    ++  +     K++Y   +      A+   Q       T  T+  +    + F 
Sbjct: 63  EYDAMNEIAKRL---NFKVEYQNTSWDAMIQAVSDGQYQ--IGMTGITIKDDRKEKVDFS 117

Query: 120 PITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPI 174
                  Q  ++     +     S + L    +  Q GT+     + +    +       
Sbjct: 118 DPYMRSQQFMLVRGDETRFDDAKSFAALESGLVGAQPGTSPFYTAVYEVLDGNEQNPRIK 177

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +FE       A +A   D    D  A      ++D   +  ++ + +          +G 
Sbjct: 178 LFETFGATVQALKAGDVDLVLTDSVAAKGYVDSSD--GQLKVVGEPLGTEDFGFIFPKG- 234

Query: 235 TEWYNIVSWTHYAMVT 250
           +E    V+    A+  
Sbjct: 235 SELVAPVNAAIKALKE 250


>gi|241113705|ref|YP_002973540.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861913|gb|ACS59579.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 310

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 71/231 (30%), Gaps = 12/231 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKER 88
           IK  G LK   +      +    +G   G D D   AL   +  D   ++   +      
Sbjct: 60  IKSSGVLKVATDLT-PPISFHGEDGKLIGIDADIAAALGVILGLD---VEMTDVGAGAAI 115

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGA 146
             ++ +K+ D+           E+   +       +D    +  K     I  +  L G 
Sbjct: 116 VPSILAKRFDLSISG--INDDPELEKQVDVID-YMYDATTIMTIKDNPLAIKGMEDLCGK 172

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALK 205
            + V  GT     +           + +   ++ ++  A R  R DA      +++Y  +
Sbjct: 173 KVAVPVGTFQAKMVEAASAICATPVNIMSIPKMPDVLQAVRTGRADATVNGYATSVYTTE 232

Query: 206 LTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                      LPDI      L     + + +  + V      MV +    
Sbjct: 233 HQTGNGKGLQALPDIRLAVGYLGMLTAKDNPQLRDSVVAALQQMVDSGAYE 283


>gi|90418698|ref|ZP_01226609.1| putative amino acid-binding protein, ABC-type transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90336778|gb|EAS50483.1| putative amino acid-binding protein, ABC-type transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 290

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 84/266 (31%), Gaps = 32/266 (12%)

Query: 5   FFVSILCLIILFFTSFSTNASILG------------------DIKKRGFLKCGINTGLVG 46
           F V IL     F     T A+ +                   D+  R  ++    T    
Sbjct: 10  FLVGILVSAAGFLGDAVTGAATVKAQVATPNFFDQRQRMTKPDLGARTRIRFLTTTNYPP 69

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F  +   G   GF+VD  RA+   +   P + Q   +  ++   ALQ    + +      
Sbjct: 70  FNFLDRRGRLAGFNVDLVRAICEELDILP-RCQIEAMAFRDLVPALQRGDGEAIVAGLSM 128

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYF 164
           T   +    LAF    +     F+  K+  +       L+G  + V  G+     L  +F
Sbjct: 129 TP--DTRRDLAFTEPYFRYPARFVTTKEAPVKEPVADTLAGKPVGVAEGSAHAAMLRSFF 186

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPD 219
                +    ++   ++  AA R     AY GD   L     +N             L D
Sbjct: 187 P----QIDRRLYPNRDDGLAALRKGEIAAYFGDGVGLSFWLESNAAEDCCGFSGGPFLSD 242

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTH 245
                 L+ A+ Q D E      +  
Sbjct: 243 RFLGEGLSIAVAQKDEELARAFDYAI 268


>gi|162447509|ref|YP_001620641.1| ABC transporter substrate-binding protein [Acholeplasma laidlawii
           PG-8A]
 gi|161985616|gb|ABX81265.1| ABC-type transport system, substrate-binding component
           [Acholeplasma laidlawii PG-8A]
          Length = 269

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 76/269 (28%), Gaps = 25/269 (9%)

Query: 1   MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRGF---LKCGINTGLVGFAEV----K 51
           M K      + +  I L       +++    I    +   +  G +     +  +     
Sbjct: 1   MIKKMLSMFMVMGVITLIVGCDMGSSNTFTFIIDESYDEYITMGTSADYAPYEWLVKDEN 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            N    G D++  + ++     +   I             L   ++D +      T  R 
Sbjct: 61  NNQTVVGIDIEIAKVIAKHAGKNLKVI---HKGFDFLLEDLADGRVDFVISAMTPTPERA 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSV----SQLSGASICVQAGTTTELTLADYFKAH 167
               + F  + Y   Q  ++  K            LS   I  Q G+  +    D F A 
Sbjct: 118 EI--VDFSTVYYMATQVVLIETKNMDVYTSVASMNLSNIRIGAQLGSIQQDYANDLFDA- 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPL 226
                    + V ++     + +      +                 +  L +    S  
Sbjct: 175 ---PQKQFIQAVPDLVLGLTSGQLAGVIMEKPVAEGYINNMTSLSIANFTLGNPEDGS-- 229

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           A A+ +G+     +++ T   +  + ++ 
Sbjct: 230 AVAVRKGNKALLELINDTIQILQESGQIE 258


>gi|330821193|ref|YP_004350055.1| ABC polar amino acid transporter [Burkholderia gladioli BSR3]
 gi|327373188|gb|AEA64543.1| ABC polar amino acid transporter [Burkholderia gladioli BSR3]
          Length = 290

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 74/210 (35%), Gaps = 10/210 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G + G+  +     NG  +GF VD    ++  +    +++  + +N    F AL SK
Sbjct: 39  LVVGSDFGVAPWMTRAENG-PQGFGVDLVNEIAKRLGRPGAQV--VDVNFSGLFSALFSK 95

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +I+  +   + T  R  +  + F       G GF++     +S  + L G  + V  GT 
Sbjct: 96  RIEFTANPMNITAER--AQRMLFTEPIMSTGNGFLLRAGDRMSGFADLKGKELAVNRGTI 153

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           ++    +    +    +   ++   +   A    R  A+         +   +       
Sbjct: 154 SDTWATENAAKYGF--NIQRYDVFPDTVQAVITGR--AFVALNEIPTVIFAASKN-HAVK 208

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +  +  +      A    D ++ N V    
Sbjct: 209 VGYEDFNGRNFGYAFRPDDADYRNRVDAAI 238


>gi|260662607|ref|ZP_05863502.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|260553298|gb|EEX26241.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 462

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 71/209 (33%), Gaps = 14/209 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWK----GFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
                  G       F     NG +     G +++  R ++     +  K     ++   
Sbjct: 10  AEKTYTIGTVDTFEPFEIQDKNGTYNGKNPGIEIEMLREIAK---HEGFKYNLKIMSFNA 66

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              AL++ QID        T  R+    + F    Y DG    + +   I+ +SQL G +
Sbjct: 67  TLTALEAGQIDASMGGMSVTDERKA--KIDFSKSYYTDGVVMAVPENSKITKLSQLKGKT 124

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V++GT++ +        +  K     F     +          A   D      L+  
Sbjct: 125 VDVKSGTSSAIYANSVKDKYGFK--VKYFNTSNTMWNDVMNGNAAATFDDGPV---LQYG 179

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                +  I+   I+ +P+A  + +G  +
Sbjct: 180 IRNGIKLKIVTKEINSTPVAMGVKKGQNQ 208


>gi|148359089|ref|YP_001250296.1| arginine transport system periplasmic binding protein [Legionella
           pneumophila str. Corby]
 gi|296107137|ref|YP_003618837.1| arginine transport system substrate-binding protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148280862|gb|ABQ54950.1| arginine 3rd transport system periplasmic binding protein
           [Legionella pneumophila str. Corby]
 gi|295649038|gb|ADG24885.1| arginine transport system substrate-binding protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 238

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 13/212 (6%)

Query: 36  LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G +     F      N    GFD+D  + +   +    +   +      + F AL++
Sbjct: 21  LTIGTSKFNPPFEVWSGNNSSLYGFDIDLMQEICRRL---HATCTFEAYIFDDLFSALKN 77

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +++D++  +   T  R+      F          +I      IS+   L G  I V+ GT
Sbjct: 78  REVDLVIASMIITDERKKH--FIFSLPYMESNSQYITTVDSKISTFDDLHGKKIGVRKGT 135

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +     + N     I +E ++++      +  DA   D     A       P  +
Sbjct: 136 PYARQVL----SENRNNQVIFYELIQDMLLGLSNNEVDASLMDYE--AAKYWMASEPYAY 189

Query: 215 VILPDIISK-SPLAPAIIQGDTEWYNIVSWTH 245
            ++   IS     +             ++   
Sbjct: 190 KLIGKKISIGEGYSIMANPDQFVLIKKINKIL 221


>gi|187924721|ref|YP_001896363.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
 gi|187715915|gb|ACD17139.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 254

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 68/214 (31%), Gaps = 22/214 (10%)

Query: 3   KDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60
           K F       L++    ++S  A+             G     V F  +   +   +G  
Sbjct: 6   KRFASVFATGLLLAGAPAWSVAATTYE---------VGSTATGVPFTFLDVKSNSIQGLL 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A   A   D   ++           +L +K+IDI+S     T  RE    + F  
Sbjct: 57  VDAITATGKAAGFD---VKIEQTTFSSLIPSLTTKKIDIISAAMLKTPARE--QVVDFSD 111

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y  G+G I+        +S+  L G  +  Q GT     L        +      ++ 
Sbjct: 112 TVYSYGEGLIVRADDKGQYTSMDDLKGEIVGAQVGTAFVDALN----KKGIFKEVRTYDS 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           V +I       R  A  GD   +      N  P 
Sbjct: 168 VADIMRDVALGRIKAGFGDHPIIAYQLQHNPNPQ 201


>gi|25028135|ref|NP_738189.1| glutamate periplasmic binding protein [Corynebacterium efficiens
           YS-314]
 gi|23493419|dbj|BAC18389.1| glutamate periplasmic binding protein [Corynebacterium efficiens
           YS-314]
          Length = 292

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 60/207 (28%), Gaps = 11/207 (5%)

Query: 49  EVKANGDWKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
               +G   G +VD       A++     +  +I +    A +R   +Q+ ++ +++   
Sbjct: 1   MRSPDGTMSGLEVDISTYVVNAIADDNGWEHPEITWRETPAAQRETFIQNGEVAMIAATY 60

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                R     + F        Q  ++        +  +   +  +   +T     +   
Sbjct: 61  SINQAR--LDTVNFGGPFLVTHQALMVP--DEDDRIQDMDDLNNDLILCSTAGSVPSQRA 116

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDII 221
           K          ++       A      DA T D + LY            V +    +  
Sbjct: 117 KEAIPGLQLQEYDTPSSCIEALDQGSVDAITTDATILYGYAQYYPGDFRIVEMTRDGEQF 176

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +       + +GD +    ++     M
Sbjct: 177 TDEYYGIGLAKGDEDGTEAINTALQEM 203


>gi|257125489|ref|YP_003163603.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049428|gb|ACV38612.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 521

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 82/269 (30%), Gaps = 46/269 (17%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     K+  +++L  I  F T +S       DIK       G+  G   F   + +   
Sbjct: 1   MKFSTIKNKILTLLVFIATFVTGYS------DDIK------VGMECGYAPFNWFQNDAKR 48

Query: 57  K----------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
                      G+DV+  + ++  +  + + +            A+ S ++D++      
Sbjct: 49  GAVKVDGGYCGGYDVEIAKVIAKKL--NKNLVIVKTEWDALLGPAINSGKVDLVIAGMSA 106

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADY 163
           T  R     LAF    Y      ++ K        S++  +GA I  Q  T     +   
Sbjct: 107 TPER--RQSLAFSKSYYESDLVVVVKKNGKYANAKSINDFAGAKITGQLNTLHYDVIDQM 164

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                        E    +  A  + + D Y  +     A+      P    I  D  + 
Sbjct: 165 KGVQKQT----AMENFPAMIVALNSGKIDGYISERPG--AMAAQFSNPDLKFISFDKNTG 218

Query: 224 SPL-------APAIIQGDTEWYNIVSWTH 245
                     A  +  G+TE    V+   
Sbjct: 219 FKYDTAEVNVAVGMKLGNTELEEKVNKIL 247


>gi|304389823|ref|ZP_07371782.1| amino acid ABC superfamily ATP binding cassette transporter
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315655009|ref|ZP_07907913.1| amino acid ABC superfamily ATP binding cassette transporter
           [Mobiluncus curtisii ATCC 51333]
 gi|315657128|ref|ZP_07910012.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|304326999|gb|EFL94238.1| amino acid ABC superfamily ATP binding cassette transporter
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315490665|gb|EFU80286.1| amino acid ABC superfamily ATP binding cassette transporter
           [Mobiluncus curtisii ATCC 51333]
 gi|315492231|gb|EFU81838.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 288

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 67/253 (26%), Gaps = 29/253 (11%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--VKANGDWK----------GFDVDF 63
             +  ++         + G    G+      +       + D            G+DV  
Sbjct: 23  AGSPAASGGDTAIPGLEDGVFTVGMEAAYAPYNWAQPDKSNDAVPIKDSALYANGYDVMT 82

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + ++ A       ++   L       A+QS +ID        T  RE +  + F     
Sbjct: 83  AKQIADANGWK---LEIKQLEWDSLIPAVQSGEIDAAIAGQSMTKEREET--VDFAGPYL 137

Query: 124 FDGQGFIMHKKKGISSVS---QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +     +       ++      L+G     Q GT    TL    K    +      E   
Sbjct: 138 YARIVVLTKANSKFANAKGLADLAGGRTTSQTGTVWYDTLIPQIKDAKRQA---PAESAP 194

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAIIQGD 234
            +  A    + D    D+                  P +            +  ++ +G+
Sbjct: 195 AMLVALETGKVDYVVTDMPTGQGAIAAYPDMKILDFPDDGDDFQVSDEDVNIGISVKKGN 254

Query: 235 TEWYNIVSWTHYA 247
           T   N ++     
Sbjct: 255 TALKNAINKALSG 267


>gi|209524668|ref|ZP_03273215.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209494812|gb|EDZ95120.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 401

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 79/276 (28%), Gaps = 26/276 (9%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFC 64
            +     +     S ++ +  L  I  RG L   IN      F    ANG+  G DV   
Sbjct: 126 LLGNSAAVSQANQSLNSMSPDLQKIMDRGELIVAINQEDSPPFFAEDANGELIGLDVAIA 185

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R ++  I     ++        E    +     D+       TL R     ++F      
Sbjct: 186 REIA-QIIGVKVRLDRSAKTFNEVVNMVYQGDADMAISKLSQTLERAKI--VSFSHPYLT 242

Query: 125 DGQGFI---------MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
              G +            K  +  +    G  + V   ++ E    + F         I 
Sbjct: 243 MRHGLLLNRLQLTQATRNKDLVEFLRDFEG-RMGVINASSYERFAIEKFPKA----TIIR 297

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGD 234
           +   E++          A   D   +  + +           +    S+  +A A+    
Sbjct: 298 YSNWEDLIRGAMRGDILAAYRDELEVKKILINYPNVALNFQTVALTDSQDLIAIALPWSS 357

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
                 V+           +   Q  ++Q+ +D ++
Sbjct: 358 NHLLKFVNLYLT-------MNEKQYTVSQLLEDYSD 386


>gi|227529349|ref|ZP_03959398.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350777|gb|EEJ41068.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus vaginalis ATCC 49540]
          Length = 282

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 70/213 (32%), Gaps = 15/213 (7%)

Query: 1   MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57
           M K F   +S++ L I+  ++    ++       +       +  L   +          
Sbjct: 1   MKKKFLTILSVVVLTIIGLSACGKKSAA-----DKDTWTVATSGTLYPTSYHDPKTKKLT 55

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DV+  RA++  +      +++   +      A+++ + D+ + +   +  R+ +  ++
Sbjct: 56  GYDVEVIRAVAKGLHKK---VKFKEYDVDGMLTAVKTGKADMAADDFAISPARQKNYLMS 112

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                 F+          GI++   + G     +AGT     LA    A  + Y  +   
Sbjct: 113 SPIKHSFNSLIVRQSDNSGINNWKDIKGKKSAGEAGTNY-QRLAQQLGAKLVNYDNV--- 168

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             +       + + D    D             
Sbjct: 169 SNDVYMKGVASGKTDFIMNDYYLQKLALKAQPN 201


>gi|303233085|ref|ZP_07319760.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302480860|gb|EFL43945.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 564

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 86/292 (29%), Gaps = 42/292 (14%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKR-------------GFLKCGINTGLVGFAEV 50
                + C+++          +     K+              G L+ G+      +   
Sbjct: 34  RVLACVWCMVLALCVCAPQARATEPFQKQNVPQELMQMELETPGILRVGMEANYAPYNWS 93

Query: 51  ------------KANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
                         + ++  G+DV   + L+ A+     K++ + +      +ALQS +I
Sbjct: 94  QTTSANDAYPISNTHDEYANGYDVQVAKHLADALG---LKLEIVKMEWDGLSVALQSGKI 150

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGT 154
           D +      T  R     + F    YF     ++ K        ++   +GA +  Q  T
Sbjct: 151 DAIIAGMTPTNER--REQIDFSDPYYFSDIVMVVKKNGPFAQAHALDDFAGARVTSQLNT 208

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                ++   +                + ++  + + DAY  +     A   +N + +  
Sbjct: 209 IQYTLISQINQVDKQP----ALSDFPTMISSLLSDKIDAYVSERPGAMAAIASNPQLAMV 264

Query: 215 VILP----DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
                   D       A   ++  +     ++          +  + Q  ++
Sbjct: 265 SFEDGKGFDTGGVETSAAVGLRKGSRLAPYINAALQGFDARAQSTLMQHMVD 316


>gi|330971468|gb|EGH71534.1| extracellular solute-binding protein family 3 [Pseudomonas syringae
           pv. aceris str. M302273PT]
          Length = 282

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 16/251 (6%)

Query: 6   FVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           F + + L+ L      + +   S +  + +   L+ G+ +G V + +   + G+W+GF  
Sbjct: 12  FAAAIALMSLGPFYSQAQAAPESSMARVDRTKLLRVGVASGSVPYYKKNFSTGEWEGFGP 71

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF R L+  +      I+++        L LQS +ID++      T  RE  +G  F   
Sbjct: 72  DFARDLAKDLGVK---IEFVETTWGNSVLDLQSNKIDVMFA-LTPTPAREKMIG--FSAP 125

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            + +    +        S  Q +     +     +  ++ ++  A          E V  
Sbjct: 126 LFDNTYVMLCKSGYPDKSWEQFNSPEAKITVDLGS--SMDNFATAKLPNASFSRLESVMA 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                +A R D     +     +          + +P     +P++  +   +   +   
Sbjct: 184 STMLLQAGRADCQVLTVLLAMPIVQKMP-GVVEIQVPQPALAAPVSIGVQFDEDPTF--- 239

Query: 242 SWTHYAMVTAE 252
                  V  E
Sbjct: 240 KSAINKWVAKE 250


>gi|149202782|ref|ZP_01879754.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseovarius sp. TM1035]
 gi|149144064|gb|EDM32098.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseovarius sp. TM1035]
          Length = 219

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 15/165 (9%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +   G+  GF+ +    L           +++  +       L S
Sbjct: 4   TVRLGTEGAYPPYNFINDKGEVDGFERELGDELCKRA---KLTCEWVTNDWDSIIPNLVS 60

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D++      T  R+    + F                   S+   +    I  Q+GT
Sbjct: 61  GNYDVIIAGMSITEERD--QVIDFTQNYTLPDPS----AYLAPSADVDVKSGVIAAQSGT 114

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                +A      +     + +   EE  AA R    DA   D +
Sbjct: 115 IQASYVA------SSGATLVEYATPEESIAAVRNGEADAVLADRA 153


>gi|328881418|emb|CCA54657.1| ABC transporter substrate-binding protein [Streptomyces venezuelae
           ATCC 10712]
          Length = 321

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 19/232 (8%)

Query: 13  IILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSA 70
           ++   T     A +L  D+++RG L    + G    +    +G    G D DF  A++ A
Sbjct: 53  VVAAVTRNEAAAKLLPADVRQRGGLTLAASVGTPPSSAYLPDGKTVVGVDADFSAAVAKA 112

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +  +     +  +    AL S + D+ + N   T  R  +  + F      DGQGF 
Sbjct: 113 LGLELKR---EVVGFEAILPALGSGKYDVGTGNFGVTEERRKT--IDFV-TYVNDGQGFA 166

Query: 131 MHKKKGISSVSQ---LSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEID 183
                 + +V+    L G  + V AGTT E TL         A    Y   V+     I 
Sbjct: 167 SRADSPLKAVTDLTQLCGLKVAVNAGTTFERTLEKNKGRCAAAGKQPYEVNVYSETGAIW 226

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
            + R  R D        +  ++    +  +   L +      +  A  +G  
Sbjct: 227 MSLRQGRSDVVMNT---INGVRYAVTQQKDVKFLNEYRRLD-VGFAFKKGTP 274


>gi|281491439|ref|YP_003353419.1| amino acid ABC transporter substrate-binding protein [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375157|gb|ADA64670.1| Amino acid ABC transporter, substrate-binding protein [Lactococcus
           lactis subsp. lactis KF147]
          Length = 281

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 69/237 (29%), Gaps = 12/237 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59
           M     V+   L ++   +    +S   D   +   +    +     F    + G+  G+
Sbjct: 1   MRTSLKVTFAALSLIAAGTLVACSSGSKDSSDKATSVVIATDGATKPFTYSDSQGNLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  RA+   +     K+++   +       + S +  + + +  W   R       F 
Sbjct: 61  DIEVARAVFKKL--PQYKVKFQVTDFSGISPGIDSGRYQMGANDFGWEKTRAE--KYYFS 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     ++ K     +++ L+G S      +    ++ D+ KA+  K   I +   
Sbjct: 117 SPLSKSNNAVLV-KSGTYKTLADLAGKSTIGNPASNYTKSIQDWNKANPDKEIKISYSAD 175

Query: 180 EEI----DAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                       + + D    D         +   D      I  D           
Sbjct: 176 STSINTRFTQVESGKIDFMLYDKISLESAVKEQGFDNLKIEDISMDTGDAEHDGYEY 232


>gi|254693090|ref|ZP_05154918.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 3 str. Tulya]
          Length = 280

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 76/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 61  NRRNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--WE 117

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K     +        + V AGT  E  L +YF 
Sbjct: 118 PTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + +  A +  + D    D  +L A   + +       ++   L   
Sbjct: 178 QAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ Q ++   +  +    A+  
Sbjct: 234 YLGSGLSIAVTQQNSALASAFNNALQALQQ 263


>gi|225851842|ref|YP_002732075.1| extracellular solute-binding protein family 3 [Brucella melitensis
           ATCC 23457]
 gi|256044023|ref|ZP_05446934.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256112819|ref|ZP_05453740.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 3 str. Ether]
 gi|265990434|ref|ZP_06102991.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265994262|ref|ZP_06106819.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|225640207|gb|ACO00121.1| extracellular solute-binding protein family 3 [Brucella melitensis
           ATCC 23457]
 gi|262765375|gb|EEZ11164.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|263001218|gb|EEZ13793.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
          Length = 280

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 79/271 (29%), Gaps = 29/271 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G   G+++D  +AL   +       Q   +   E    +   Q D +    D T
Sbjct: 61  NRRNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAGWDPT 119

Query: 108 LL-REISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
              RE      F          F     K     +        + V AGT  E  L +YF
Sbjct: 120 DRNREK---FTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYF 176

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPD 219
                   P+ +   + +  A +  + D    D  +L A   + +       ++   L  
Sbjct: 177 PQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAP 232

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               S L+ A+ + ++   +  +    A+  
Sbjct: 233 QYLGSGLSIAVTRQNSALASAFNNALQALQQ 263


>gi|323211047|gb|EFZ95904.1| putative periplasmic amino acid-binding protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
          Length = 222

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 75/230 (32%), Gaps = 15/230 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +S++ L I+  ++F+        I +   L   ++          A+G  +G D++
Sbjct: 4   KKFGLSMIVLGIMSSSAFA------DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLE 57

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              +   +     +  +Y          A+ S Q D+       T  R+    + F    
Sbjct: 58  LFSSYCQSRHCKLNITEY---AWDGMLGAVASGQADVAFSGISITDKRKKV--IDFSEPY 112

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
           Y +    +      I  +++++L+  SI    G      + +  +           ++  
Sbjct: 113 YINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPT 172

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
             E  A  +    D    +    +  K     P E   +   + +  +A 
Sbjct: 173 YNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAF 222


>gi|262203727|ref|YP_003274935.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           bronchialis DSM 43247]
 gi|262087074|gb|ACY23042.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia
           bronchialis DSM 43247]
          Length = 582

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 70/219 (31%), Gaps = 15/219 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  G  +       V + G + GFD +  +A+++ +     +I +           + 
Sbjct: 71  GTISVGTLSDAGPSICVNSKGVFTGFDNELLKAVAAKLG---LRITFSGTEFAGLLSQVA 127

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D+ S +   T  R  +  + F     F     +      I   + LS ++      
Sbjct: 128 NDRFDVGSSSITTTDERRRT--VDFTNGYDFGYFSLVAPADGPIKGFANLSPSTRIGVVQ 185

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
            T    + D +  + +    + F       A  ++ + DA+               RP +
Sbjct: 186 GT----VQDDYVLNTLHLDAVKFPDYATAYANLKSGQIDAWVAPSQQAEGAV----RPGD 237

Query: 214 HVILPDIISKSPL--APAIIQGDTEWYNIVSWTHYAMVT 250
              + +         A A+ +        ++    A++ 
Sbjct: 238 GTAIVENTFSLNNFVAWAVGRDKPRLVAALNSGLDAIIA 276


>gi|254509810|ref|ZP_05121877.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533521|gb|EEE36509.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 249

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 15/168 (8%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I     ++ G       +  +   G+  GF+ +    L      D    +++  +     
Sbjct: 17  IAMADTVRMGTEGAYPPYNFINDAGEIDGFEREVGDELCKRANLD---CEWVKNDWDSII 73

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L S   D +      T  R+    + F    Y       +   +G+     ++G  + 
Sbjct: 74  PNLVSGNYDTIIAGMSITDERDEV--IDFTQNYYPPTASAYVAAAEGV----DVAGGIVA 127

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            Q  T     +A+           + F   EE  AA R    DA   D
Sbjct: 128 AQTATIQAGHVAE------SGATLVEFASPEETIAAVRNGEADAVLAD 169


>gi|218708097|ref|YP_002415718.1| putative amino-acid ABC transporter-binding protein PatH [Vibrio
           splendidus LGP32]
 gi|218321116|emb|CAV17066.1| putative amino-acid ABC transporter-binding protein patH precursor
           [Vibrio splendidus LGP32]
          Length = 276

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 78/221 (35%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  K++Y+  N    
Sbjct: 45  TVQAATEVKVGMSGRYFPFTFVKQD-QLQGFEVDLWDEIGKR---NDYKVEYVTANFSGL 100

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L G +
Sbjct: 101 FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIKGIEDLDGKT 158

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 159 VAVNLGSNFEQLLRSYDK--DGKINVKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 214

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++           +    V+    AM
Sbjct: 215 TGLPLQLAGQPFETIENAWPFVDNDNGKKLQAEVNQALAAM 255


>gi|50121085|ref|YP_050252.1| ABC transporter substrate binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49611611|emb|CAG75059.1| ABC transporter, substrate binding protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 311

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 80/247 (32%), Gaps = 47/247 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--------------------------ASILGDIKKR- 33
           M    F+++  L  L   + + N                          A  +  I    
Sbjct: 1   MKHPNFITVTGLATLLSATLAANVQAQDAGFVSRIDLKANQVPIRTDKNAEAIAQIPANF 60

Query: 34  -----GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
                G L   ++       + +   N    G D D  R ++ ++  D   ++ +P + +
Sbjct: 61  KFVTPGKLTIAVSALSSPPLSLLADDNKTIVGSDADIARLVADSLGLD---LKLVPASWE 117

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQL 143
           +  L + + + D    N   T LR+      F      D  GF +    K   I+    +
Sbjct: 118 DWPLGITAGKYDAAIFNIAVTKLRKE--KFDFA-TYRIDTLGFYVKSTSKITAINKPEDV 174

Query: 144 SGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +G  + V +GT  E  L  + + ++        P+        + + ++ R DA+ G  S
Sbjct: 175 AGLKVIVGSGTNQENILLGWDRQNHANGLAPEQPVYVTDDAAANLSIQSGRVDAFFGPHS 234

Query: 200 ALYALKL 206
                  
Sbjct: 235 IGAYKAA 241


>gi|296156900|ref|ZP_06839737.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295892786|gb|EFG72567.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 285

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 76/259 (29%), Gaps = 21/259 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKAN 53
           M K   + +  +  L      S  +     + ++        +K G++     +A   + 
Sbjct: 3   MSKAIKLLLCAVTGLLLAQGASAQSCEPSKVAQKYPSLAGKTIKIGVDPESPPYAFRDSK 62

Query: 54  --GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G D D  RA+            +          AL++ QID++     +T  R 
Sbjct: 63  DFNKIIGADADMARAVFDCAGVKTE---FFTAGWPGLLPALRAGQIDVMWDLLYYTPERA 119

Query: 112 ISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGAS----ICVQAGTTTELTLADYFKA 166
                 F         G +     K I  +S+L G +    I     T  +   A     
Sbjct: 120 K--ETTFVTYMQAGTGGLVAAGNPKKIDDISKLCGLTVTAGIGTVELTMAQAQAAKCKAE 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  +    +        +HR D    D++ +  L      P  +     + S   +
Sbjct: 178 GKPDVTIMTSADIASGARLVASHRADVMMYDLALVDGLAKQ--NPQLYTRGFMVTSGMKI 235

Query: 227 APAIIQGDTEWYNIVSWTH 245
              + +G+ +    VS   
Sbjct: 236 GVGVKKGNADMIAAVSDGL 254


>gi|119026274|ref|YP_910119.1| putative ABC-type amino acid transport system periplasmic component
           [Bifidobacterium adolescentis ATCC 15703]
 gi|118765858|dbj|BAF40037.1| putative ABC-type amino acid transport system periplasmic component
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 305

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 85/289 (29%), Gaps = 21/289 (7%)

Query: 1   MYK-DFFVSILCLIIL--FFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGD 55
           M +   F +++  ++      + +   +        G   +K  + +    ++    NG+
Sbjct: 25  MRRNKLFTTVVAALVAVGSLGALAGCGTANAKESDNGVKTVKFVLESQDPPYSYADKNGN 84

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+   +A+   +  D  K +Y  ++ +   +  +  + D L      T  R     
Sbjct: 85  PAGFDLTVLKAIDKKL--DNYKFEYSVIDYQTALIGTKQGKYDALIGAFFETPARAKQYL 142

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L+     +F     I+ +   + S+  L G ++     T         +   N      V
Sbjct: 143 LSKPYNYFFMN--LIVPEDSKVESLKDLDGKTLDPIVPTDGRYVAIQNWLKRNPDVKIKV 200

Query: 176 -----FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                 E  +++  A      DA     +    +  T         L            I
Sbjct: 201 PTVTNQETFQDMFNAVHDGTYDAVYLSKAQYDGVADTLG-----YKLKVTDPVDAAGTVI 255

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
           +         V       + A     T   I++      N    R LG 
Sbjct: 256 LYNRKNGD--VQKAIDEQIDALIKDGTLGKISEKYFKQDNFQKARELGA 302


>gi|51244735|ref|YP_064619.1| two-component system sensory/regulatory protein [Desulfotalea
           psychrophila LSv54]
 gi|50875772|emb|CAG35612.1| related to two-component system sensory/regulatory protein (hybrid
           family) [Desulfotalea psychrophila LSv54]
          Length = 1041

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 90/285 (31%), Gaps = 20/285 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI-------KKRGFLKCGINTGLVGFAEVKAN 53
           M + FF S++ +  L   +    AS L          +    ++ G++     F  +   
Sbjct: 1   MKRYFF-SVISVCFLVVWAIPALASDLQLTPAEQSWLRAHPDIRLGVDPDYAPFESI-EG 58

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + G   D+   +S  +      +    L  KE     +  ++D+           E +
Sbjct: 59  GVYVGLAADYVSLVSKKLGLSLVPVP--DLTWKEVMALAEQGELDLFPAVV---QTPERN 113

Query: 114 LGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F                   +  ++  +G  + V  G      + D+ ++ +    
Sbjct: 114 ELWLFAKPHMAYSTVIFTRDDYWNVFGLADFAGKKVAVVRG----YAILDFIRSAHPHLD 169

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            ++ + V+       A R  A+  DI+   +     +  +  +     +    L  A+ +
Sbjct: 170 IVLVDSVDMGLRQLEAGRVSAFVNDIATGVSAIQKMNLKNLKIAAYTDLKDKGLGFAVRK 229

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
              E   ++     A +T EE         +V   +      R+L
Sbjct: 230 DWPELVAMIDKVL-ASITPEEHAAIHNRWIKVESFSPWQHWARWL 273


>gi|298346438|ref|YP_003719125.1| amino acid ABC transporter amino acid-binding protein/permease
           [Mobiluncus curtisii ATCC 43063]
 gi|298236499|gb|ADI67631.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Mobiluncus curtisii ATCC
           43063]
          Length = 288

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 67/253 (26%), Gaps = 29/253 (11%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--VKANGDWK----------GFDVDF 63
             +  ++         + G    G+      +       + D            G+DV  
Sbjct: 23  AGSPAASGGDTAIPGLEDGVFTVGMEAAYAPYNWAQPDKSNDAVPIKDSALYANGYDVMT 82

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + ++ A       ++   L       A+QS +ID        T  RE +  + F     
Sbjct: 83  AKQIADANGWK---LEIKQLEWDSLIPAVQSGEIDAAIAGQSMTKEREET--VDFAGPYL 137

Query: 124 FDGQGFIMHKKKGISSVS---QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +     +       ++      L+G     Q GT    TL    K    +      E   
Sbjct: 138 YARIVVLTKANSKFANAKGLADLAGGRTTSQTGTVWYDTLIPQIKDAKRQA---PAESAP 194

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAIIQGD 234
            +  A    + D    D+                  P +            +  ++ +G+
Sbjct: 195 AMLVALETGKVDYVVTDMPTGQGAVQAYPDMKILDFPDDGDDFQVSDEDVNIGISVKKGN 254

Query: 235 TEWYNIVSWTHYA 247
           T   N ++     
Sbjct: 255 TALKNAINKALSG 267


>gi|16119636|ref|NP_396342.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15162206|gb|AAK90783.1| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 311

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 79/239 (33%), Gaps = 14/239 (5%)

Query: 24  ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A  L   IK +  +K   +      +     G   G D D   AL   +  D   +Q   
Sbjct: 53  ADRLPSAIKDKKVVKVATDLT-PPISFQDEAGKLIGIDADLAAALGVILGVD---VQMTN 108

Query: 83  L-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
           +        A+ SK+ D+     +  +  E  +         +D    +  K     I S
Sbjct: 109 VGAGAAIVPAVLSKRFDMTLSGINDDVELEKQVD---VIDYMYDATTIMTIKGNPLSIKS 165

Query: 140 VSQLSGASICVQAGTTTEL-TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD- 197
           +  L G  + V  GT      +A   K        I   ++ ++  A R  R DA     
Sbjct: 166 MEDLCGKKVAVPVGTFQNRLVVAASAKCKTTPIEIISIPKMPDVLQAVRTGRADATVNGY 225

Query: 198 ISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +++Y  +    +      LPD+  +   L   + + + E  + V  +   MV +    
Sbjct: 226 ATSVYTTEKQTGKGVGLQALPDVRLTVGYLGMLVSKDNPELRDAVIASLQHMVDSGAYQ 284


>gi|476160|gb|AAA56674.1| arginine permease substrate-binding subunit [Listeria
           monocytogenes]
          Length = 110

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 5   FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGF 59
             +  + +   F + F+ +     L  I+++G L  G++     +     +       GF
Sbjct: 8   ILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQTIDGKDKVVGF 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           DV     ++  +     K+    +N      +L++ +ID++     
Sbjct: 68  DVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMS 110


>gi|218660064|ref|ZP_03515994.1| extracellular solute-binding protein family 3 [Rhizobium etli
           IE4771]
          Length = 209

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 5/168 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             +L  +     L   + T     + +    +  G+DVD  + ++ ++  +   ++++  
Sbjct: 27  GEVLDRVLGSKTLTVAVGTDWGPISHLDEKHELVGYDVDISKEIAKSLGVE---VKFVTP 83

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
                     + + DI       T  R       F  +  +     +++K    + ++ L
Sbjct: 84  GWDVMAAGKWAGRWDIAMGQMIPTKARAEI--FDFPSLYIWGPNVAVVNKASKATKLADL 141

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            G  I V +GT  E      F     K                  ++ 
Sbjct: 142 DGKVIGVSSGTGAEGYANHNFLPACEKRQACGVSVQAGEVKNLHEYKH 189


>gi|170694469|ref|ZP_02885622.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170140603|gb|EDT08778.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 285

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 77/259 (29%), Gaps = 21/259 (8%)

Query: 1   MYKDFFVSILCLIILFFT-SFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKAN 53
           M K F + +  +  L      S  +     + ++        +K G++     +A   + 
Sbjct: 3   MPKAFKLLLCAVTSLLLAQGASAQSCEPSKVAQKYPSLAGKTIKIGVDPESPPYAFRDSK 62

Query: 54  --GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
                 G D D  RA+            +          AL++ QID++     +T  R 
Sbjct: 63  DFNKIIGADADMARAVFDCAGVKTE---FFTAGWPGLLPALRAGQIDVMWDLLYYTPERA 119

Query: 112 ISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGAS----ICVQAGTTTELTLADYFKA 166
                 F         G +     K I  +S+L G +    I     T  +   A     
Sbjct: 120 K--ETTFVTYMQAGTGGLVAAGNPKKIDDISKLCGLTVTAGIGTVELTMAQAQAAKCKAE 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  +    +        +HR D    D++ +  L      P  +     + S   +
Sbjct: 178 GKSDVTIMTSADIASGARLVASHRADVMMYDLALVDGLAKQ--NPQLYTRGFMVTSGMKI 235

Query: 227 APAIIQGDTEWYNIVSWTH 245
              + +G+ +    VS   
Sbjct: 236 GVGVKKGNADMIAAVSDGL 254


>gi|330466996|ref|YP_004404739.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Verrucosispora maris AB-18-032]
 gi|328809967|gb|AEB44139.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Verrucosispora maris AB-18-032]
          Length = 288

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 26/249 (10%)

Query: 7   VSILCLIILFFTSFSTNA------SILGDI---------KKRGFLKCGIN-TGLVGFAEV 50
           ++    ++   T+ +         S              +  G L    +      +   
Sbjct: 10  LATAGAVLFAVTACAPQNEPAPPPSTSDAASCAKENLPTQTPGKLTIATDQPAYQPWFVD 69

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               + +G++     A++  +     ++ +  +       A   K  D        T  R
Sbjct: 70  DKPENGQGYESAVAYAVAEKLGYTRDEVVWTRVKFDSAI-APGPKSFDFDINQFSITEER 128

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAH 167
           +    + F    Y   Q  I  K   I   +S++ L  A +  Q GTT+   + D  K  
Sbjct: 129 KK--AVDFTAPYYLVRQTVIALKSSKIAGKTSLADLREAKLGAQVGTTSYQAITDVVK-- 184

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPL 226
                P V+   ++   A +  + D    D+  A Y      D       LP + +    
Sbjct: 185 -PTTKPQVYNSNDDAKKALQNGQLDGLVVDLPTAFYITAAEIDDAVIVGQLPQVGTPEAF 243

Query: 227 APAIIQGDT 235
              + +   
Sbjct: 244 GLLLDKDSP 252


>gi|328462013|gb|EGF34197.1| glutamine-binding protein precursor [Lactobacillus helveticus MTCC
           5463]
          Length = 196

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +    +   ++   A  R   L++  ID +      T  R     + F    +  G   +
Sbjct: 1   MLGKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVDFSKPYFPAGSSLL 58

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           +     I +V  L+G ++    GTT    +  +          + ++   +  +A +A++
Sbjct: 59  VPDNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQ 114

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             A T D   L  +    + P  + ++  + + +P   A+ +G  +  + ++   
Sbjct: 115 GVALTTDNGLLAGIAQ--ENPG-YKLVGGVYNNAPYGIAMNKGQKDMVDHINKAL 166


>gi|206576131|ref|YP_002237664.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288934541|ref|YP_003438600.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290508741|ref|ZP_06548112.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
 gi|206565189|gb|ACI06965.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288889250|gb|ADC57568.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289778135|gb|EFD86132.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 298

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 59/190 (31%), Gaps = 14/190 (7%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL-NAK 86
           DI KRG++  G N         + +     G ++D   A+++ +  +   +++       
Sbjct: 47  DIAKRGYIVAGTNPNTPPTTFFQEDNKTLAGREIDVMNAVAARLGVE---VRWQDTGGFD 103

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQL 143
                L+S + D+   N + T  R     + F         G I  K   I   +S   +
Sbjct: 104 NIIPGLKSGRYDVALSNINATKKR--LEQVDFVSYYDASRLGVISRKDANIAPFTSFEAV 161

Query: 144 SGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            G  +   AGTT    L         A        VF        A  + R   + G   
Sbjct: 162 CGQEVGAGAGTTQIGRLEAASKICTDAGKPPIKIAVFPDRPSGVQAVVSGRVPMFFGPYE 221

Query: 200 ALYALKLTND 209
            L        
Sbjct: 222 GLTYQVSQVK 231


>gi|296158386|ref|ZP_06841217.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295891330|gb|EFG71117.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 254

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 66/214 (30%), Gaps = 22/214 (10%)

Query: 3   KDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60
           K F       L++    + S  A+             G     V F  +       +G  
Sbjct: 6   KRFASVFATGLLLAGAPALSVAATTYE---------VGATATGVPFTFLDVKTNSIQGLL 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A   A   D   ++           +L +K+IDI+S     T  RE    + F  
Sbjct: 57  VDAITATGKAAGFD---VKIEQTTFSALIPSLTTKKIDIISAAMLKTPAREQI--VDFSD 111

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y  G+G I+        +S+  L G  +  Q GT     L        +      ++ 
Sbjct: 112 TVYSYGEGLIVRADDKGQYTSMDDLKGEVVGAQVGTAFVDALN----KKGIFKEVRTYDS 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           V +I       R  A  GD   L      N  P 
Sbjct: 168 VADIMRDVALGRIKAGFGDHPILAYQLQHNPNPQ 201


>gi|85711137|ref|ZP_01042197.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Idiomarina baltica OS145]
 gi|85695050|gb|EAQ32988.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Idiomarina baltica OS145]
          Length = 249

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 21/249 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  ++ ++ L     ++    A           L  G+  G   +  V   G   GFD
Sbjct: 1   MKKPHWLLLIGLTSFALSA----ADTKDA------LTVGLAKGYEPYQFVNGKGVASGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +A+   +       Q+   +  +    ++   + I        +         F  
Sbjct: 51  IDVAKAVFDQL---EVSYQFNAYSWDDVMSLIRHNALAIAVGAE---VSAARKPYFLFTD 104

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y      +   +   I  V  L G  I     ++ E  L+        +      E  
Sbjct: 105 AYYTRQPALLALAENRQIRRVKDLIGQHITGDRHSSLEAYLSQLGVKSQFRIE--QMESK 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE   A       A         AL L +    +  +L      + +A  +   + E  N
Sbjct: 163 EEAINALAKGHVKAVIM--PKRVALYLADKVGIKLKVLWQSPQPTQVAFGVSNNNPELVN 220

Query: 240 IVSWTHYAM 248
            ++    A+
Sbjct: 221 QINDALDAL 229


>gi|312872684|ref|ZP_07732749.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311091726|gb|EFQ50105.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
          Length = 535

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 79/269 (29%), Gaps = 34/269 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M      F + IL L  +   SFS  + +   IK+   LK G+      +          
Sbjct: 1   MKSKINTFMIMILFLCSIITVSFSHTSIVNAKIKEP--LKIGMEANYPPYNWTQNTDAHG 58

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +     ++            +L S +ID++     
Sbjct: 59  AVPIDGSKQFANGYDVQIAKIIGKKL---HRRVIVEKTVWDGLLPSLTSGKIDLIIAGMS 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD 162
            T  R     + F           I++     ++ ++L    GA +  Q GT     +  
Sbjct: 116 PTSERRK--AIDFSIPYRKSTFVLIVNNASNFATATKLTEFKGAKLTAQQGTLHYDLIKQ 173

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A               +  +  +   D Y  +     +    N       +      
Sbjct: 174 LVGAK----RLTAMRDFSVMRQSLASGTIDGYVAEDIEYQSYHRVNPNIVSINLSKMPHF 229

Query: 223 KSPL-----APAIIQGDTEWYNIVSWTHY 246
                    +  + +G+T+  N V+    
Sbjct: 230 HVNYNDSITSIGVKKGNTKLLNQVNQILK 258


>gi|288960578|ref|YP_003450918.1| octopine/nopaline transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288912886|dbj|BAI74374.1| octopine/nopaline transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 279

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 70/243 (28%), Gaps = 39/243 (16%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S L   IL  T  +              +          +    A+G   G +
Sbjct: 1   MKTLLLASTLSFAILSVTGAAAQTKPTA-------ITIATEGADEPWNFTTADGKLDGLE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L + +     +   +  +      AL +++ D +  +   T  R     + F  
Sbjct: 54  IDLANDLCARM---SVRCTIVVQDWDGLIPALNARKFDAIMASMIITEKRLAL--INFSQ 108

Query: 121 ITYFDGQGFIMHKKKGISSVS------------------------QLSGASICVQAGTTT 156
                    I+ K   ++S+                         QL   +I VQ  T+ 
Sbjct: 109 PYAPTAAAMIVEKTSPLASLPGAGTTVDLGGDPAQVKAALAPLEAQLKDKAIGVQVATSN 168

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              +  YFK          ++  E+ D   +A R D      S L AL L  +     + 
Sbjct: 169 MAFMDTYFK---GVAKIREYKTTEQHDLDLQAGRIDGVVTQKSTLGALLLKPEYKDYTMT 225

Query: 217 LPD 219
            P 
Sbjct: 226 GPT 228


>gi|332096815|gb|EGJ01805.1| glutamate/aspartate periplasmic-binding protein [Shigella
           dysenteriae 155-74]
          Length = 171

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 49/132 (37%)

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
             G   +  K   I   + L G ++ V +GTT+E+ L    +   M    I  +   +  
Sbjct: 1   MVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSF 60

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               + R  A+  D + L   +    +P    I+    S+      + + D ++  ++  
Sbjct: 61  RTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDD 120

Query: 244 THYAMVTAEELG 255
           T   M T+ E  
Sbjct: 121 TIAQMQTSGEAE 132


>gi|254688608|ref|ZP_05151862.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 6 str. 870]
 gi|256256856|ref|ZP_05462392.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 9 str. C68]
 gi|260754079|ref|ZP_05866427.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260883106|ref|ZP_05894720.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|297247706|ref|ZP_06931424.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|260674187|gb|EEX61008.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260872634|gb|EEX79703.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|297174875|gb|EFH34222.1| polar amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 280

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 76/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 61  NRRNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--WE 117

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K     +        + V AGT  E  L +YF 
Sbjct: 118 PTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + +  A +  + D    D  +L A   + +       ++   L   
Sbjct: 178 QAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ + ++   +  +    A+  
Sbjct: 234 YLGSGLSIAVTRQNSALASAFNNALQALQQ 263


>gi|253702714|ref|YP_003023903.1| histidine kinase [Geobacter sp. M21]
 gi|251777564|gb|ACT20145.1| histidine kinase [Geobacter sp. M21]
          Length = 572

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 78/223 (34%), Gaps = 13/223 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G N+    +  +  NG+ +GF VD  RA++  +     +I+    +  +    L S
Sbjct: 31  VIVVGGNSNYPPYQFLDENGEPRGFIVDLTRAIARVMG---MRIEIRLDDFGKILKELDS 87

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
            ++D+L     ++  R       F        Q     K    + S+ +L G  + V +G
Sbjct: 88  GEVDML-EGLSYSDARAR--EYDFSTPHSIIVQAIFARKGTPAVKSLEELKGKKVLVHSG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPS 212
                 L +           ++     E      A RCD A    + A+Y ++      +
Sbjct: 145 GGMHSYLQE----KRYGADLVLTGSPRETLRQLAAGRCDYAVVALLPAMYIIR-EEKFSN 199

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +  ++  +     A+ +G+ E    ++     +    E  
Sbjct: 200 LVPVATNVAPQRYYCYAVKKGNAELVAQMNEGLSILKKTGEFN 242


>gi|239616854|ref|YP_002940176.1| extracellular solute-binding protein family 3 [Kosmotoga olearia
           TBF 19.5.1]
 gi|239505685|gb|ACR79172.1| extracellular solute-binding protein family 3 [Kosmotoga olearia
           TBF 19.5.1]
          Length = 209

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 9/183 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D   +     G +     +  +  NG+  GF++D   A++  +  D   I+       
Sbjct: 25  LDDTVTKQHYVFGGDHDYPPYEFIDENGNPAGFNIDLLGAIAEVMGMD---IEIRLGPWN 81

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           E   AL+  ++D L+    ++  R+  +  +           F+     GI+S   L+G 
Sbjct: 82  EVRTALERGELDGLT-GMYYSEQRDKLVDFS-TGFLIVHTTVFVRKDYNGITSEEDLAGK 139

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I V         + DY     +    I  E   +      + + D         + L  
Sbjct: 140 EIIVP----YGDIMHDYLLEKKITDKIITVESPAQALRLLASGKHDCALLGNLQGFYLAK 195

Query: 207 TND 209
              
Sbjct: 196 KLK 198


>gi|148284264|ref|YP_001248354.1| amino acid ABC transporter substrate binding protein [Orientia
           tsutsugamushi str. Boryong]
 gi|146739703|emb|CAM79513.1| amino acid ABC transporter substrate binding protein [Orientia
           tsutsugamushi str. Boryong]
          Length = 267

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 74/226 (32%), Gaps = 12/226 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    F+++L L++L + ++    S    +K    L  G       +   K + +  G
Sbjct: 16  MTKRSFMFITVLILMLLNYLAYIKIQSKNQHVKSN-VLLVGTAADNPPYEFFKDD-EIVG 73

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D+D  + +   +  +   +     +     LAL  KQ+D++      +  R+    + F
Sbjct: 74  LDIDIVKLIGQDLGKE---VVIKNFDFPGLLLALSLKQLDLVIAGLSKSDQRKEH--VNF 128

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +        +       +    + G  I  Q GTT    +A+     +        + 
Sbjct: 129 SNVYLTSKVAVLFRTDSNFADCQDIKGKIIGAQLGTT-WQDIAENINKDSDNSKLRFLDN 187

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
              +    ++   DA   +     A K   D P     + D     
Sbjct: 188 NLILVEELKSKIIDAVILEDIQ--AAKFVADNPKLKKFIIDDSISE 231


>gi|331700561|ref|YP_004397520.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329127904|gb|AEB72457.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 467

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 14/204 (6%)

Query: 37  KCGINTGLVGFAEVKANGDWK----GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
             G+    V F     NG +     G D++  RA +     +        +N      AL
Sbjct: 14  TIGVGPTFVPFEIQAKNGSYNTAHPGLDIEILRAAAKK---ENFTYTLKVMNFAAAIQAL 70

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           +  Q+D +      T  R     + F    Y  G    + K   I   + L G ++ ++ 
Sbjct: 71  EGNQVDGVIAAMMATPERAE--KIDFSKPYYNVGLALAVPKGSSIKGYNDLKGKTVAIKT 128

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+T+E       K +    H   F       +        A          L  +     
Sbjct: 129 GSTSEQYAESIQKKYGF--HITRFNDSNTELSNVLVGNSAAAIDST---ATLLYSIKNKM 183

Query: 213 EHVILPDIISKSPLAPAIIQGDTE 236
           +  ++    +K+P+A  + +G  +
Sbjct: 184 KLQLVGKAANKNPVAFGVKKGHNQ 207


>gi|317054414|ref|YP_004118439.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316952409|gb|ADU71883.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 298

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 73/287 (25%), Gaps = 35/287 (12%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINT 42
           M   K   +  L L      +                         DI KRG++  G N 
Sbjct: 1   MKFAKGMTLFALALSAHTTFAAEQAVPTDSSVHVQADPALKSLLPADIVKRGYIVAGTNP 60

Query: 43  GLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDIL 100
                   K +     G ++D   A+   +      + +            L++ + D+ 
Sbjct: 61  NTPPTTFYKEDNKTLAGREIDIMNAVGERLG---IPVHWQDTGGFDNIIPGLKTGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N + TL R  +  + F         G I  K   I    S   + G  +   +GTT  
Sbjct: 118 LSNINATLAR--TKQVDFVSYYNASLLGIISQKDANIAPFKSFDAVCGKEVGAGSGTTQV 175

Query: 158 LTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             L +       A        VF        A  + R   + G       L         
Sbjct: 176 TRLEEASKACEAAGKPPIKVSVFPDRPAGVQAVVSGRVPMFLGP---YEGLLWQVKVIKP 232

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
             +  +I             ++     V     +++          N
Sbjct: 233 LTMSGEISVTDYPVSVAFPKESALEPAVQAALNSLIKDGSYKKILDN 279


>gi|255528452|ref|ZP_05395246.1| amino acid ABC transporter, periplasmic amino acid-binding
          protein [Clostridium carboxidivorans P7]
 gi|255507858|gb|EET84304.1| amino acid ABC transporter, periplasmic amino acid-binding
          protein [Clostridium carboxidivorans P7]
          Length = 84

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 12/84 (14%)

Query: 1  MYKD--FFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFA 48
          M K     + I  L+ L     S+N S              IK  G LK G++       
Sbjct: 1  MKKKSAVLIIIAVLVSLLAGCGSSNGSTKSNDTSKDNSFQKIKDAGTLKVGLDDSYPPME 60

Query: 49 EVKANGDWKGFDVDFCRALSSAIF 72
                +  GFD+D    +   + 
Sbjct: 61 FRDEKNNLVGFDIDLGNEIGKNLG 84


>gi|313673000|ref|YP_004051111.1| multi-sensor signal transduction histidine kinase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939756|gb|ADR18948.1| multi-sensor signal transduction histidine kinase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 670

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 12/213 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +  +   I+     ++ +  NGD  GF +D  R           K+  +  +       
Sbjct: 58  AKDSITVVIDNNYPPYSYINENGDLAGFSIDLWRKFEEKTG---IKVTIIGKDWNIAQKE 114

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150
           ++  + D +         RE      F             HK   GI+  + L G  I  
Sbjct: 115 MEEGKYD-IIDTLFKNPSREKIYV--FTKPYEDVDTHIFYHKNITGIAENANLKGFQIAT 171

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           + G  T   L D     N   +   +   EE+  A       A+    +  Y        
Sbjct: 172 KKGGATAQFLKD-----NGFSNIKEYGSDEEMIKAASKGEVIAFAIGKNTGYYFLYKYKI 226

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            ++  I+P  +  + L  A ++ +    NI++ 
Sbjct: 227 QNDFKIVPKPLFSNKLHRAALKKNQNLINIINT 259


>gi|317048136|ref|YP_004115784.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316949753|gb|ADU69228.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 276

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 11/208 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                 L     F        + L      G LK   N  L     V   G  KG  ++ 
Sbjct: 12  SLLTGSLLAQTSFAACTPVQGATL---VTAGELKMSTNPTLPPLQYVDGEGQLKGMRIEL 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  +   P    Y  +        LQ  + D+++    +T  R   + +     + 
Sbjct: 69  GEEIAKRLCLKPD---YTRIEFSAMVPGLQGGRWDMINTGIFFTPARAKMMYMI-PYESQ 124

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQA---GTTTELTLADYFKAHNMKY-HPIVFERV 179
                 +      I  V  L+G SI V+      TT   ++   +A  +K      F+  
Sbjct: 125 AISVSVVPSDSGKIQKVEDLAGKSIGVEIGGFEETTIRKISKELEAKGLKPVDIHTFDNF 184

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT 207
                A RA +  A     +     +  
Sbjct: 185 TVAFQALRAQQVSAVISIDAVAADYQHK 212


>gi|160937965|ref|ZP_02085323.1| hypothetical protein CLOBOL_02859 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439191|gb|EDP16945.1| hypothetical protein CLOBOL_02859 [Clostridium bolteae ATCC
           BAA-613]
          Length = 314

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 69/236 (29%), Gaps = 29/236 (12%)

Query: 32  KRGFLKCGINTGLVGFAEV---KANGDWK---------GFDVDFCRALSSAIFDDPSKIQ 79
           ++  L+  +      +       +NG            G+DV   + +   +  D   ++
Sbjct: 65  EKKTLRVAMECAYAPYNWTQPDDSNGAVAIADSNEFAYGYDVMMAKKICEELGYD---LE 121

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKG 136
            + L+      A+ + Q+D +      T  R     + F    Y+     ++    K   
Sbjct: 122 IVRLDWDSLIPAVTTGQVDCVIAGQSITSER--LQAVDFTEPYYYATIVTLVKEGSKYAD 179

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             SV+ L+GA+   Q  T    T                     ++  +  A +CD    
Sbjct: 180 AKSVADLAGATCTSQQSTIWYNT---CLPQIQDANVLAATASAPDMLMSLNADKCDLVVT 236

Query: 197 DISALYALKLTNDRPSEHVI------LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           D        +                         +  ++ +G+TE  + ++    
Sbjct: 237 DQPTGKGALIAYPNFKMIEFGGGDADFQVTDEDINIGISLKKGNTELKDAINSVLT 292


>gi|86360917|ref|YP_472804.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86285019|gb|ABC94077.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 282

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 85/264 (32%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   +F+S + L +L  T+ +        L  +K++GF +  I      F  V A+G   
Sbjct: 1   MKAGYFLSAVSLSVLLVTAAAPVSAADDKLEQLKEQGFARIAI-ANEPPFTAVGADGKVS 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   D  R +   +                    LQ+ + D ++        R     +A
Sbjct: 60  GAAPDVARVIFEKLGVKEVVASIS--EYGAMIPGLQAGRHDAITAGLFMKPER--CNAVA 115

Query: 118 FRPITYFDGQGFIMHKKKGI-----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +      D + F + K   +       ++    A I    G T E       +A   +  
Sbjct: 116 YSEPILCDAEAFALKKGNPLKLTSYKDIADNPNAKIGAPGGGTEEKLA---LEAGVPRDR 172

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            IV    +      +  R D Y+  + +++ L    + P+   + P + +       A  
Sbjct: 173 VIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLLTKANDPNLETVAPVVNAPVYCDGAAFR 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D    +        +  + E  
Sbjct: 233 KQDVALRDAFDVELKKLKESGEFA 256


>gi|62289289|ref|YP_221082.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82699219|ref|YP_413793.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|189023542|ref|YP_001934310.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus S19]
 gi|237814780|ref|ZP_04593778.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus str. 2308 A]
 gi|254696731|ref|ZP_05158559.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254729641|ref|ZP_05188219.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus bv. 4 str. 292]
 gi|260757301|ref|ZP_05869649.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260761123|ref|ZP_05873466.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|62195421|gb|AAX73721.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82615320|emb|CAJ10281.1| Solute-binding protein/glutamate receptor:Bacterial extracellular
           solute-binding protein, family 3 [Brucella melitensis
           biovar Abortus 2308]
 gi|189019114|gb|ACD71836.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus S19]
 gi|237789617|gb|EEP63827.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus str. 2308 A]
 gi|260667619|gb|EEX54559.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260671555|gb|EEX58376.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
          Length = 280

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 76/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 61  NRRNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--WE 117

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K     +        + V AGT  E  L +YF 
Sbjct: 118 PTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + +  A +  + D    D  +L A   + +       ++   L   
Sbjct: 178 QAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ + ++   +  +    A+  
Sbjct: 234 YLGSGLSIAVTRQNSALASAFNNALQALQQ 263


>gi|295839708|ref|ZP_06826641.1| ABC transporter, solute binding protein [Streptomyces sp. SPB74]
 gi|197700000|gb|EDY46933.1| ABC transporter, solute binding protein [Streptomyces sp. SPB74]
          Length = 313

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 86/243 (35%), Gaps = 22/243 (9%)

Query: 21  STNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           +  A +L   ++  G L  G   G    A    +G    G DV+   A++  +     +I
Sbjct: 57  AAAAKLLPERVRTAGRLTLGGAIGAPPTATYLEDGKTAAGVDVEITAAVAKVLG---IRI 113

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKK 135
                + +    AL S + D+ + N   T  R  +  + F      DGQGF      K  
Sbjct: 114 DRQEASFEAILPALGSGKYDLGTGNFGVTDERRKT--IDFV-TYINDGQGFATRADEKIP 170

Query: 136 GISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            I+ ++QL G +I   AGTT E+TL        KA    Y    +     I  + +  R 
Sbjct: 171 KITDLTQLCGKNIGTGAGTTFEVTLEQNKSLCEKAGKKPYSVKTYSEQGAIWGSLQQGRT 230

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG---DTEWYNIVSWTHYAM 248
           D      S +  L+   D+      L +      +  A  +G      +   V+      
Sbjct: 231 DVVM---STINGLRYAVDQQQGLRFLNEYHRLD-VGFAFKKGSDLTPAFQKAVNVIIADG 286

Query: 249 VTA 251
             A
Sbjct: 287 TYA 289


>gi|254575078|pdb|3I6V|A Chain A, Crystal Structure Of A Periplasmic HisGLUGLNARGOPINE
           Family-Binding Protein From Silicibacter Pomeroyi In
           Complex With Lysine
          Length = 232

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 21/217 (9%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +   G+  GF+ +    L           +++  +       L S
Sbjct: 6   TVRMGTEGAYPPYNFINDAGEVDGFERELGDELCKRAG---LTCEWVKNDWDSIIPNLVS 62

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D +      T  R+    + F                   S  + LSG  +  Q  T
Sbjct: 63  GNYDTIIAGMSITDERDEV--IDFTQNYIPPTAS----SYVATSDGADLSGI-VAAQTAT 115

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +A+           + F   EE  AA R    DA   D   L  +   +      
Sbjct: 116 IQAGYIAE------SGATLVEFATPEETIAAVRNGEADAVFADRDYLVPIVAESGGELMF 169

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                +    PL   +  G  E    +     A +T+
Sbjct: 170 -----VGDDVPLGGGVGMGLRESDGELRGKFDAAITS 201


>gi|146329480|ref|YP_001208970.1| extracellular solute-binding family protein [Dichelobacter nodosus
           VCS1703A]
 gi|146232950|gb|ABQ13928.1| bacterial extracellular solute-binding family protein
           [Dichelobacter nodosus VCS1703A]
          Length = 246

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 14/215 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
                +   +     +  +  NG   G+DVD  + ++     +   ++      +E    
Sbjct: 18  AADKYRVASHPTFAPYEFLDGNGIITGYDVDLIQEIAKDQGFE---VEIHNDKWEELLDK 74

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L   + D++  +   T  R     L+     Y     F       I+S+S LSG +   +
Sbjct: 75  LNDGKRDMIVSSLMDTEERRQLADLSKPYSEYEQFTVFYKRPDLSINSLSDLSGLNAGAE 134

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR- 210
            GT     L           +    +   E   A      DAY  D +++  +       
Sbjct: 135 KGTANVERLKQ------AGANVTELDSNFEGFKAIIRGSIDAYYCDEASMAYILRGYKDK 188

Query: 211 --PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             P     LP    K+ +A  + +G+ E    ++ 
Sbjct: 189 KLPIRTFRLPKEPGKTVIA--VKKGNAELLEKINR 221


>gi|325978461|ref|YP_004288177.1| amino acid ABC transporter substrate binding protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178389|emb|CBZ48433.1| amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 284

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 30/271 (11%)

Query: 1   MYKD--FFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K   + +SI+ + ++           +    +     I     +    +     F   
Sbjct: 1   MKKKVKWIISIIVVALVGLLIFDKVTKNTSEAKSDSSEKI----TVVAATSGSPKPFTY- 55

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G+  G +++  +A+   +     K++ + +     F  L S +  I   N      R
Sbjct: 56  EEDGELTGQNIELIKAVFEKL--PQYKLKIVKVEFSSIFSGLTSGRYQIAVNNLAKNAER 113

Query: 111 EISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           E      F    + +    I      K K     S L+G S    +G  +   + +Y KA
Sbjct: 114 EK--NYLFTDPIFKNSYVVIFKNGSDKAKTADEWSDLAGLSTVGSSGVNSTTAIEEYNKA 171

Query: 167 HNMKYHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALK----LTNDRPSEHVILPDI 220
           +      + +   +         + + D    D       +    L     +    L   
Sbjct: 172 NPDNTIELNYSSEDLKSQLEGVESGKYDFLVMDKPMFEYYQKEYSLDLTGKTISGDLSTA 231

Query: 221 ISKSPLAP-AIIQGDTEWYNIVSWTHYAMVT 250
           +   P +   + + +T+    ++     +V 
Sbjct: 232 LMSEPYSYFVVGKEETQLAEDINAALKEVVE 262


>gi|306831554|ref|ZP_07464712.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate binding protein [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|304426339|gb|EFM29453.1| amino acid ABC superfamily ATP binding cassette transporter
           substrate binding protein [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
          Length = 286

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 30/271 (11%)

Query: 1   MYKD--FFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K   + +SI+ + ++           +    +     I     +    +     F   
Sbjct: 3   MKKKVKWIISIIVVALVGLLIFDKVTKNTSEAKSDSSEKI----TVVAATSGSPKPFTY- 57

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G+  G +++  +A+   +     K++ + +     F  L S +  I   N      R
Sbjct: 58  EEDGELTGQNIELIKAVFEKL--PQYKLKIVKVEFSSIFSGLTSGRYQIAVNNLAKNAER 115

Query: 111 EISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           E      F    + +    I      K K     S L+G S    +G  +   + +Y KA
Sbjct: 116 EK--NYLFTDPIFKNSYVVIFKNGSDKAKTADEWSDLAGLSTVGSSGVNSTTAIEEYNKA 173

Query: 167 HNMKYHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALK----LTNDRPSEHVILPDI 220
           +      + +   +         + + D    D       +    L     +    L   
Sbjct: 174 NPDNTIELNYSSEDLKSQLEGVESGKYDFLVMDKPMFEYYQKEYSLDLTGKTISGDLSTA 233

Query: 221 ISKSPLAP-AIIQGDTEWYNIVSWTHYAMVT 250
           +   P +   + + +T+    ++     +V 
Sbjct: 234 LMSEPYSYFVVGKEETQLAEDINAALKEVVE 264


>gi|270261361|ref|ZP_06189634.1| extracellular solute-binding protein [Serratia odorifera 4Rx13]
 gi|270044845|gb|EFA17936.1| extracellular solute-binding protein [Serratia odorifera 4Rx13]
          Length = 301

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 82/250 (32%), Gaps = 19/250 (7%)

Query: 34  GFLKCGI-NTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   + +      A   + N    G D D  + ++ ++     ++  +P + ++  L 
Sbjct: 56  GKLTVAVASENSPPLALFAEDNKTLIGSDPDIAQLVADSLG---LELNLVPTSWEDWPLG 112

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T LR+      F      D  GF +     I+S    + ++G  I
Sbjct: 113 ITSGKYDAAIFNIAVTKLRKT--KFDFA-TYRVDTLGFYVKSTSKIASINRPADVAGLRI 169

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + K +         PI        + + ++ R DA+ G  S     
Sbjct: 170 IVGSGTNQENILLGWDKQNRANGLAPVQPIYVTDDAAANLSIQSGRADAFFGPHSTGAYK 229

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                R     I P++           + D      ++     ++ + E         + 
Sbjct: 230 AALTGRTKMVGIGPNVA----YVAVTTKKDNGLVAAINAAINGVIVSGEYAQVLDRWGEH 285

Query: 265 SKDTTNPDVQ 274
            +      + 
Sbjct: 286 DEKVERSTIN 295


>gi|222055339|ref|YP_002537701.1| histidine kinase [Geobacter sp. FRC-32]
 gi|221564628|gb|ACM20600.1| histidine kinase [Geobacter sp. FRC-32]
          Length = 605

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 12/172 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     +  +  NG   GF+V+  RA++  +  D   +Q+      E   ALQS 
Sbjct: 61  VIVGGDRDYPPYEFIDKNGHAAGFNVELTRAIAEVMGMD---VQFRLGGWSEMRSALQSN 117

Query: 96  QIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           Q+D+L      +   E +  + F  P    +   F       ++S+++L+G S+ V    
Sbjct: 118 QVDVLDG---MSYSEERAKEVDFSLPHAMINHAVFARRDSPTVNSLAELAGKSVAVH--- 171

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALK 205
                + D            +     +      A + D A    +  +Y ++
Sbjct: 172 -GGGIMHDILTQQGFSGRLELTATPADALRLLAAGKTDYAIVAILPGMYIVR 222


>gi|218509737|ref|ZP_03507615.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli Brasil 5]
          Length = 313

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 73/220 (33%), Gaps = 14/220 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GF+VD  R +   +     K Q   +   +   AL + 
Sbjct: 57  LRFLTSVDFPPFNFTDQNGKLSGFNVDLAREICGELEIS-DKCQIQAIPFADLKDALAAS 115

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+ +        + + L+G S+ V  G
Sbjct: 116 QGDAVIAGLAVTP--ELRRRFVFSRPYLMLPARFVRNLAAPVEGKTAAALAGRSVGVVKG 173

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  LA +F A   +     F+  E + AA +  + DA   D   L     +      
Sbjct: 174 TVHEAMLAAFFPALKAE----PFDTKEALLAALKERKVDAAFADALQLSFWVSSPASDKC 229

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +   L +      +   + Q D+   + +     A+
Sbjct: 230 CALFDGPYLSEHFLGEGMTIMLRQKDSVLTSAIDHALAAL 269


>gi|119896790|ref|YP_932003.1| putative cyclohexadienyl dehydratase [Azoarcus sp. BH72]
 gi|119669203|emb|CAL93116.1| putative cyclohexadienyl dehydratase [Azoarcus sp. BH72]
          Length = 268

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 70/221 (31%), Gaps = 14/221 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
             S L  I     LK  +     G +       +  G DVD  R L+  +     +++++
Sbjct: 27  AQSHLDRILAERVLKVCVWPDYYGISFRNPRTQELAGIDVDLARELARDL---DVRLEFV 83

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
             +       +   + D+       T  R   L     P    D         + I S  
Sbjct: 84  DSSFANLIGDVLGDRCDVAMFAIGITAQRAEKLRFT-SPHLASDIYAITTRTNRRIRSWD 142

Query: 142 QL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            +   G  + V  GT  E  + D  +         V       +    + R D +  D  
Sbjct: 143 DIDQPGVIVAVAKGTLHEPVMRDKLR----HAQLQVLASPHAREQEVESGRADVFMTDFP 198

Query: 200 ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYN 239
             Y+ ++ ++     ++ P      +P A AI  GD  W+ 
Sbjct: 199 --YSRRMLDNADWARLVAPSTRYHVTPYAWAIAPGDDRWHQ 237


>gi|78223984|ref|YP_385731.1| histidine kinase [Geobacter metallireducens GS-15]
 gi|78195239|gb|ABB33006.1| amino acid-binding domain sensor histidine kinase [Geobacter
           metallireducens GS-15]
          Length = 576

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 59/205 (28%), Gaps = 19/205 (9%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K        F V ++ L+     +  T  +      +   +  G+            +
Sbjct: 2   MTKSGMACRSCFLVLLIALLTFSNLAIPTAGA------EARVVTVGVYENSPKI-FTDDS 54

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   G  +D    ++     +   + Y+     E    L   +ID L  +  +T  RE  
Sbjct: 55  GKPSGIFIDIIEHIAKTEGWN---LHYVHGTWVEGLDRLAKGEID-LMPDVAYTAERENL 110

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                 P+           K  GI S+  L+G  +     T    T      +  +K   
Sbjct: 111 YSFHRIPV-LTGWSQVYARKGSGIQSILNLNGKRVAALEQTIQFETFRRLASSFGLKITL 169

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDI 198
           I     +         + DA   + 
Sbjct: 170 IPVPDYKTEFDMLANGKIDAAVTNR 194


>gi|172063475|ref|YP_001811126.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171995992|gb|ACB66910.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 280

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 94/278 (33%), Gaps = 18/278 (6%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+ L F      A+ L  ++  G L  G +     +A ++A G   GFD +F R L+  
Sbjct: 14  ALVPLAFACSLAAAAPLQTVR-PGTLLVGSDLTYPPYAYLEA-GKPAGFDAEFARLLARH 71

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +P    +L     +  L +++++ D+++     T   +    + F P     G   +
Sbjct: 72  LKLEP---VFLDTRFPDLILGMKARRFDVVASALYVTP--DRVKQVDFVP-YLKTGASLL 125

Query: 131 MHKKKGIS--SVSQLSGASICVQAGTTTELTLA----DYFKAHNMKY-HPIVFERVEEID 183
           + K       +   L G  +    G +    L     D  KA        + F    E  
Sbjct: 126 VAKGSAFQPKTPQDLCGKRVGSIKGASWTPKLRAVSQDTCKAAGRGEIAILEFPTSPEAT 185

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A  +   D    D +               +    ++    +   + +GD+     +  
Sbjct: 186 SALMSKAVDVQIEDAAVAQG-IPKQTNGRVDISSTTLLYPIVIGLGMTKGDSGLQGALQG 244

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
                  + E G   K      ++ T  DV   LG +K
Sbjct: 245 ALNDAKRSGEYGSLVKKYG--LQEPTPADVANALGTEK 280


>gi|52840915|ref|YP_094714.1| arginine ABC transporter, periplasmic binding protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52628026|gb|AAU26767.1| arginine ABC transporter, periplasmic binding protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 254

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 70/224 (31%), Gaps = 14/224 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G+      F     N +  G+D+     L   +     +  +  +  ++   AL +K
Sbjct: 31  LIVGVGGFYPPFIMQGTNNELFGYDIATMTELCKIM---KRQCNFRVMRFRQLIPALINK 87

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS---GASICVQA 152
           Q+D        T  R     + F          F+ +          L    G  I V+ 
Sbjct: 88  QVDAAISAISITSERASL--VNFSMPYLLSYSRFLTNNIHNTHQPFNLMLLKGKRIGVEE 145

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            T     +        +    + F+R EE+  A  A+  D    D     AL  + +   
Sbjct: 146 NTVFSQEIRRM---GIIDPVIVEFDRTEEMLEALNANEVDFVLMDNP--AALYWSANSSG 200

Query: 213 EHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +++   +     L  A+ + + E    ++        +E+  
Sbjct: 201 RLLVVGSPMLVGYGLGIAVNRENAELLKSLNDALIEYQRSEKYK 244


>gi|83954099|ref|ZP_00962819.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841136|gb|EAP80306.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 244

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 48/169 (28%), Gaps = 15/169 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G       +  +   G+  GF+ +    L +         +++          L 
Sbjct: 25  KTIRMGTEGAYPPYNFLNDAGEVDGFEREVGDELCARA---ELTCEWVTNEWDSIIPNLT 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S   D +      T  RE    + F    +              S+ + + G  +  Q  
Sbjct: 82  SGNYDTIIAGMSITDEREEV--IDFTQNYFPPAAS----AYAAKSADADVMGGVVAAQTS 135

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           T     +A+           + F   +E  AA      DA   D  AL 
Sbjct: 136 TIQAGHVAE------SGATLLEFATYDETVAAVNNGEADAVFADKDALV 178


>gi|270261846|ref|ZP_06190118.1| extracellular solute-binding protein [Serratia odorifera 4Rx13]
 gi|270043722|gb|EFA16814.1| extracellular solute-binding protein [Serratia odorifera 4Rx13]
          Length = 307

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 82/251 (32%), Gaps = 16/251 (6%)

Query: 34  GFLKCGIN--TGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L   ++       F    + N    G + D  R ++  +     K++ +P + ++  L
Sbjct: 57  GTLTVAVSILGSGPPFGLYARDNKTVIGSESDIARLVADGLG---LKLKLVPTSWEDWPL 113

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
            + S + D    N   T  R+      F      D  GF +    K   I S   ++G  
Sbjct: 114 GVTSGKYDAAIYNITVTHERKT--KFDFA-TYRQDTLGFYVKADSKITSIKSAPDIAGKK 170

Query: 148 ICVQAGTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L  + K +  K      PI          A ++ R DA  G   A   
Sbjct: 171 IIVDSGTNQEAVLLAWDKENQAKGLPALQPIYVTDKAASTLAIQSGRADATFGPNVAGAY 230

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
               N +     I+P    +S      ++      + V  +  + +             +
Sbjct: 231 QAKLNGKTKLVGIVPGGWPRSANIAVTLKKGNGLVDAVQASLNSAIANGSYLKVLDRWAE 290

Query: 264 VSKDTTNPDVQ 274
             +   + ++ 
Sbjct: 291 SDEKIEHSEIN 301


>gi|327192223|gb|EGE59190.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CNPAF512]
          Length = 287

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 72/220 (32%), Gaps = 14/220 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GF+VD  R +   +     K Q   +   +   AL + 
Sbjct: 56  LRFLTSVDFPPFNFTDQNGKLSGFNVDLAREICGELEIS-DKCQIQAIPFADLKDALAAS 114

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+ +        + + L+G  + V  G
Sbjct: 115 QGDAVIAGLAVTP--ELRRQFVFSRPYLMLPARFVRNLAAPVEGKTAAALAGRPVGVVKG 172

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  LA +F A   +     F+  E + AA +  + DA   D   L     +      
Sbjct: 173 TVHEAMLAAFFPALKAE----PFDTKEALLAALKERKVDAAFADALQLSFWVSSPASDKC 228

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +   L +      +   + Q D+   + +     A+
Sbjct: 229 CALFDGPYLSEHFLGEGMTIMLRQKDSVLTSAIDHALAAL 268


>gi|227823731|ref|YP_002827704.1| extracellular solute-binding protein, family 3 [Sinorhizobium
           fredii NGR234]
 gi|227342733|gb|ACP26951.1| extracellular solute-binding protein, family 3 [Sinorhizobium
           fredii NGR234]
          Length = 269

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/255 (10%), Positives = 72/255 (28%), Gaps = 18/255 (7%)

Query: 2   YKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
            +     I   + +   F++ +  + +         +             V    G   G
Sbjct: 4   RRHVLAGIAAALAVPFAFSAPAVASDLPD--LGGKTVVVVTENAYPPLQFVDPKSGQAVG 61

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           ++ D    ++  +     +++Y   +      ++   Q       T  T+  +    + F
Sbjct: 62  WEYDAMNEIAKRL---NFQVEYQNTSWDAMIQSVSDGQYQ--IGMTGITIKDDRKEKVDF 116

Query: 119 RPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHP 173
                   Q  ++   +       S + +    +  Q GT+     + +    +      
Sbjct: 117 SDPYMRSQQFMLVRADETRFKDAKSFAAVEDGLVGAQPGTSPFYTAVYEILDGNEQNPRI 176

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            +FE       A +A   D    D  A       ++      ++ + +          +G
Sbjct: 177 KLFETFGATVQALKAGDVDLVLTDSVAAKGYVDASEGK--LKVVGEPLGTEDFGFIFPKG 234

Query: 234 DTEWYNIVSWTHYAM 248
            ++    V+    A+
Sbjct: 235 -SDLVQPVNAAIKAL 248


>gi|152999808|ref|YP_001365489.1| extracellular solute-binding protein [Shewanella baltica OS185]
 gi|151364426|gb|ABS07426.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS185]
          Length = 285

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 19/252 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G N     +A     G+ +G DVD  RA +  +  +   I ++ + AK     L+
Sbjct: 33  KTIKVGYN-DWPPYAWQDPQGEAQGLDVDLMRAFAVYLGCE---INFINVPAKRSHQMLK 88

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASIC 149
           + Q+D+L      T  R+      F      +            +  I     +    + 
Sbjct: 89  AGQLDVLMGA-TMTDERQAY--AHFSSYYRDEELRLFVLDEQKDQINIDKWEDIFTKKLR 145

Query: 150 VQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +   ++     ADY ++          ++    ++        R D   GD  A+  +  
Sbjct: 146 LLVPSSGWYG-ADYQESQYRLEQEHLLVLSPDSDKSVQMLTYGRGDMIVGDTMAMPYIAS 204

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
            +    + V L  ++ ++ +   + +           +    A++   E+     N  Q 
Sbjct: 205 QHQH-IKLVPLKLVLDQNHIHLMLSKASMTPSQLEQFNQAIKALMDNGEIA-RVINKWQQ 262

Query: 265 SKDTTNPDVQRF 276
                  ++ R 
Sbjct: 263 MSLAKQSNMSRL 274


>gi|323144306|ref|ZP_08078922.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
 gi|322415919|gb|EFY06637.1| putative glutamine ABC transporter, periplasmic glutamine-binding
           protein GlnH [Succinatimonas hippei YIT 12066]
          Length = 244

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     L  +   +F+ NA I          K  ++     F+  K +  + G +
Sbjct: 1   MRKLLF----ALFSILLFAFNANAQIY---------KIAVDAAYPPFSFKKGD-TFVGIE 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++     +    +   +N       L S QID      + +  R+    + F  
Sbjct: 47  LDMLAEIAKR---EGFSYELKFMNFDGVIPGLVSGQIDGALDGINISEERKKI--VDFSD 101

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +  G   +       I   S L G +  ++ GT          +A     H   +   
Sbjct: 102 GYFKSGLCVVTRISDDRIKDFSDLKGKTAAIKKGTYGMEFAEKNKQAL--DLHLQYYLLS 159

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            ++  A R H  D +  D   +       ++    + L DI      A A+ +G+ +
Sbjct: 160 PDLALAVRNHNADFFMEDYPVISYQIKIGEQQGLKIALRDIYGSPVYAFAVKKGENQ 216


>gi|318061945|ref|ZP_07980666.1| ABC transporter substrate-binding protein [Streptomyces sp.
           SA3_actG]
 gi|318078797|ref|ZP_07986129.1| ABC transporter substrate-binding protein [Streptomyces sp.
           SA3_actF]
          Length = 327

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 87/243 (35%), Gaps = 22/243 (9%)

Query: 21  STNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           +  A +L   +++ G L  G   G    A    +G    G DV+   A++  +     +I
Sbjct: 71  AAAARLLPKRVREAGRLTLGGAIGAPPTATYLEDGKTAAGVDVEITEAVAKVLG---IRI 127

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKK 135
                + +    AL S + DI + N   T  R  +  + F      DGQGF      K  
Sbjct: 128 DRQEASFEAILPALGSGKYDIGTGNFGVTDERRKT--IDFV-TYINDGQGFATRADEKLP 184

Query: 136 GISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            I+ ++QL G +I   AGTT E+TL        KA    Y    +     I  + +  R 
Sbjct: 185 KITDLTQLCGKNIGTGAGTTFEVTLEQNKSLCEKAGKKPYSVKTYSEQGAIWGSLQQGRT 244

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNIVSWTHYAM 248
           D      S +  L+   D+      L +      +  A  +G      +   V+      
Sbjct: 245 DVVM---STINGLRYAVDQQQGLKFLNEYHRLD-VGFAFKKGSDLTHAFQKAVNVLIADG 300

Query: 249 VTA 251
             A
Sbjct: 301 TYA 303


>gi|116250336|ref|YP_766174.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254984|emb|CAK06058.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 291

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 69/217 (31%), Gaps = 14/217 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GFDVD  R + S +     K Q   +   +   AL + 
Sbjct: 60  LRFLTSVDFPPFNFTDQNGKLSGFDVDLAREICSELEIS-DKCQIQAIPFADLRDALAAS 118

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+ +        + + LS   + V  G
Sbjct: 119 QGDAVIAGLAVTP--ELRRQFLFSRPYLMLPARFVRNLGVPLDGKTAAALSSHPVGVVRG 176

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  LA +F     +     F+  + + AA +  + DA   D   L     +      
Sbjct: 177 TVHEAMLAAFFPTLKAE----PFDTKDALLAALKDRKVDAAFADALQLSFWVSSPASAKC 232

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +   L +      +   + Q D+   + +    
Sbjct: 233 CALFDGPYLSEHFLGEGMTIMLRQKDSVLTSAIDHAL 269


>gi|50123005|ref|YP_052172.1| octopine-binding periplasmic protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613531|emb|CAG76982.1| octopine-binding periplasmic protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 289

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 38/239 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     + C + +  T  ++  +   + KK   ++         +   K +G   G +
Sbjct: 1   MIKSKLTLLACSLCMAGTLAASFTASAEE-KKWTTVRIATEGAYHPYNFTKPDGTLDGME 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + L + +     K + +         AL + + D +      T  R     + F  
Sbjct: 60  IELYKVLCNNM---QVKCEIMVQPFASAIPALNAGKYDAIIAGMSATAKR--REVIDFSQ 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------------------------LSGASICVQAGT 154
                GQ F + K   ++                              L G +I VQ+ +
Sbjct: 115 PYTQAGQTFAVLKSNSLAKDFPDAGVRFSINPADEATALAEVEKLKPLLEGKTIGVQSAS 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                L  Y K          ++  +E D   +A R D           LK T D+P  
Sbjct: 175 IASAFLDKYMK---GVMKVREYKTTQEHDLDLKAGRVDLVIASAP---YLKSTTDKPGN 227


>gi|83942925|ref|ZP_00955385.1| His/Glu/Gln/Arg/opine family protein ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Sulfitobacter sp. EE-36]
 gi|83845933|gb|EAP83810.1| His/Glu/Gln/Arg/opine family protein ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Sulfitobacter sp. EE-36]
          Length = 244

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 48/169 (28%), Gaps = 15/169 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             ++ G       +  +   G+  GF+ +    L +         +++          L 
Sbjct: 25  KTIRMGTEGAYPPYNFLNDAGEVDGFEREVGDELCARA---ELTCEWVTNEWDSIIPNLT 81

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S   D +      T  RE    + F    +              S+ + + G  +  Q  
Sbjct: 82  SGNYDTIIAGMSITDEREEV--IDFTQNYFPPAAS----AYAAKSADADVMGGVVAAQTS 135

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           T     +A+           + F   +E  AA      DA   D  AL 
Sbjct: 136 TIQAGHVAE------SGATLLEFATYDETVAAVNNGEADAVFADKDALV 178


>gi|225387880|ref|ZP_03757644.1| hypothetical protein CLOSTASPAR_01650 [Clostridium asparagiforme
           DSM 15981]
 gi|225046007|gb|EEG56253.1| hypothetical protein CLOSTASPAR_01650 [Clostridium asparagiforme
           DSM 15981]
          Length = 318

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 68/235 (28%), Gaps = 29/235 (12%)

Query: 32  KRGFLKCGINTGLVGFAEV---KANGDW---------KGFDVDFCRALSSAIFDDPSKIQ 79
           ++  L+  +      +       ANG            G+DV   + +S  +  D   ++
Sbjct: 68  EKKVLRVAMECAYAPYNWTQPDDANGAVPIADSNEFANGYDVMMAKKISEELGYD---LE 124

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-- 137
            + L+      A+ + Q+D +      T  R     + F    Y+     +  K      
Sbjct: 125 IVRLDWDSLIPAVTTGQVDCVIAGQSITSAR--LQAVDFSEPYYYATIVTLTKKDSPFAA 182

Query: 138 -SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             SV+ L GA+   Q  T    T                     ++  +  A +CD    
Sbjct: 183 AKSVADLKGATCTSQQSTIWYDT---CLPQIEDANVLSATANAPDMLMSLNAGKCDIVVT 239

Query: 197 DISALYALKLTNDRPSEHVI------LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           D        +                      +  +  ++ +G+TE  + +    
Sbjct: 240 DQPTGKGALIAYPDFVMLDFGGAEGDFQVTNEEINIGISMKKGNTELKSAIDGVL 294


>gi|148559934|ref|YP_001258332.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|254707963|ref|ZP_05169791.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis M163/99/10]
 gi|254709458|ref|ZP_05171269.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis B2/94]
 gi|254713123|ref|ZP_05174934.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M644/93/1]
 gi|254716524|ref|ZP_05178335.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M13/05/1]
 gi|256030952|ref|ZP_05444566.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella pinnipedialis M292/94/1]
 gi|256158998|ref|ZP_05456835.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti M490/95/1]
 gi|256254356|ref|ZP_05459892.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti B1/94]
 gi|256368756|ref|YP_003106262.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260168087|ref|ZP_05754898.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|261218319|ref|ZP_05932600.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261221517|ref|ZP_05935798.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261315454|ref|ZP_05954651.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261316981|ref|ZP_05956178.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|265988017|ref|ZP_06100574.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|265997480|ref|ZP_06110037.1| extracellular solute-binding protein family 3 [Brucella ceti
           M490/95/1]
 gi|148371191|gb|ABQ61170.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|255998914|gb|ACU47313.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260920101|gb|EEX86754.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|260923408|gb|EEX89976.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261296204|gb|EEX99700.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261304480|gb|EEY07977.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|262551948|gb|EEZ07938.1| extracellular solute-binding protein family 3 [Brucella ceti
           M490/95/1]
 gi|264660214|gb|EEZ30475.1| extracellular solute-binding protein [Brucella pinnipedialis
           M292/94/1]
          Length = 280

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 77/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             +   G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 61  NRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--WE 117

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K     +        + V AGT  E  L +YF 
Sbjct: 118 PTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + +  A +  + D    D  +L A   + +       ++   L   
Sbjct: 178 QAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ + ++   +  +    A+  
Sbjct: 234 YLGSGLSIAVTRQNSALASAFNNALQALQQ 263


>gi|302326906|gb|ADL26107.1| extracellular solute-binding protein, family 3 [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 547

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 92/305 (30%), Gaps = 50/305 (16%)

Query: 31  KKRGF---LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           K+ G    L+   +  +  F+ +  N    G DVD  + L   +    S I+   ++  +
Sbjct: 169 KESGSEQILRIATSADVPPFSFMSGN-QIVGLDVDIAKLLEEKLNIKTSIIK---MDRNK 224

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----------------- 130
              AL++   D++           +   + +    Y     F+                 
Sbjct: 225 LVTALKNNDADLIISAFTI--CECLRHEIDYSKPYYIGKTAFVIRNDFGKEATLSKVPKM 282

Query: 131 ----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K   I  ++ LSG  + VQ GTT +  +    K          +  + E+  A 
Sbjct: 283 TYLEPKKPDEIYKLADLSGKFVGVQTGTTLDEQVQQLIKL----PRIQYYANIPEMTKAL 338

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                D    D S            S+  IL + ++K     A+ +      + +     
Sbjct: 339 EERELDGIAVDYSVAE---TILKHHSDFSILKERLNKDVFGIAMSKNSP-LKSSIDSCIK 394

Query: 247 AMVTAEE----LGITQKNINQVSKDTTNPDVQRFLGIDKSSNI--------GEALGLTKD 294
            +    E         KN++ V     +      L +   +          GE  G+  D
Sbjct: 395 VLQKKGEIQKIKDKWSKNMSAVRVIKQDWVGTDTLVVGTEALYAPYEFYQWGELSGIDID 454

Query: 295 WTYRI 299
             Y I
Sbjct: 455 IMYTI 459



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 6/104 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
              L  G       +   +  G+  G D+D    +   +  +   I++  +N      +L
Sbjct: 426 TDTLVVGTEALYAPYEFYQW-GELSGIDIDIMYTIGKMLNKN---IKFADMNFDVLIPSL 481

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +++ D+       T  R  S  + F      +    ++H  + 
Sbjct: 482 VNEKTDLCIAAMSITEER--SSLIDFSIPYDKNESVIVVHTPQH 523


>gi|261417455|ref|YP_003251138.1| extracellular solute-binding protein family 3 [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261373911|gb|ACX76656.1| extracellular solute-binding protein family 3 [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 544

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 92/305 (30%), Gaps = 50/305 (16%)

Query: 31  KKRGF---LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           K+ G    L+   +  +  F+ +  N    G DVD  + L   +    S I+   ++  +
Sbjct: 166 KESGSEQILRIATSADVPPFSFMSGN-QIVGLDVDIAKLLEEKLNIKTSIIK---MDRNK 221

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----------------- 130
              AL++   D++           +   + +    Y     F+                 
Sbjct: 222 LVTALKNNDADLIISAFTI--CECLRHEIDYSKPYYIGKTAFVIRNDFGKEATLSKVPKM 279

Query: 131 ----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K   I  ++ LSG  + VQ GTT +  +    K          +  + E+  A 
Sbjct: 280 TYLEPKKPDEIYKLADLSGKFVGVQTGTTLDEQVQQLIKL----PRIQYYANIPEMTKAL 335

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                D    D S            S+  IL + ++K     A+ +      + +     
Sbjct: 336 EERELDGIAVDYSVAE---TILKHHSDFSILKERLNKDVFGIAMSKNSP-LKSSIDSCIK 391

Query: 247 AMVTAEE----LGITQKNINQVSKDTTNPDVQRFLGIDKSSNI--------GEALGLTKD 294
            +    E         KN++ V     +      L +   +          GE  G+  D
Sbjct: 392 VLQKKGEIQKIKDKWSKNMSAVRVIKQDWVGTDTLVVGTEALYAPYEFYQWGELSGIDID 451

Query: 295 WTYRI 299
             Y I
Sbjct: 452 IMYTI 456



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 6/104 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
              L  G       +   +  G+  G D+D    +   +  +   I++  +N      +L
Sbjct: 423 TDTLVVGTEALYAPYEFYQW-GELSGIDIDIMYTIGKMLNKN---IKFADMNFDVLIPSL 478

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +++ D+       T  R  S  + F      +    ++H  + 
Sbjct: 479 VNEKTDLCIAAMSITEER--SSLIDFSIPYDKNESVIVVHTPQH 520


>gi|86147174|ref|ZP_01065490.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio sp. MED222]
 gi|85835058|gb|EAQ53200.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio sp. MED222]
          Length = 249

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 78/221 (35%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  K++Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-QLQGFEVDLWDEIGKR---NDYKVEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIKGIEDLDGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSYDK--DGKINVKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++           +    V+    AM
Sbjct: 188 TGLPLQLAGQPFETIENAWPFVDNDNGKKLQAEVNEALAAM 228


>gi|256830078|ref|YP_003158806.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579254|gb|ACU90390.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
           DSM 4028]
          Length = 1055

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 69/222 (31%), Gaps = 13/222 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G +     F  +   G+  GF+V+  R ++  +  D   ++       +    L+  
Sbjct: 283 LIVGGDHRYPPFEYLDEKGNPAGFNVELTRMIAREMGLD---VEIRLGPWADVLRDLERG 339

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAG 153
           +ID + +   +++ R+      F      +    ++ + +     S+S L G  I VQ G
Sbjct: 340 EIDAV-QGMFYSVERDR--KFDFTQAHSVNNYAVVVRRGESAPPVSLSDLKGKRIVVQKG 396

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             +   L        ++      E  E++       + D        +    +     + 
Sbjct: 397 DVSHDYLLQ----RGLESQIFTVESPEDMLKELAEGKYDCALVPR-IVALHIIKARAWTN 451

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +  +         A+  G        S     +  + E  
Sbjct: 452 LQLSQNSFFSLDYCYAVPNGHAALLAQFSEGLQVVKDSGEYR 493



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 55/192 (28%), Gaps = 17/192 (8%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               +L + IL     +  +     +     +          F+ V   G   GF V+  
Sbjct: 29  LLAFMLLVFILQTPRTAVASEPSSPVISAAEI------DYPPFSIVDETGRADGFSVELL 82

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA  +A+  D   + +      E    L+   + +L      T  RE      F      
Sbjct: 83  RAALAAMGRD---VTFRTGPWGEVKGWLEKGDVQVL-PLVGRTPEREEL--FDFTVPYMS 136

Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                ++    + I S++ L G  + V  G   E  L    +              E+  
Sbjct: 137 LHGAIVVRSGTEDIQSLADLKGRRVAVMRGDNAEEFLRREER----GILIQTTPSFEQAL 192

Query: 184 AAYRAHRCDAYT 195
                 R DA  
Sbjct: 193 HELSQGRHDAVV 204


>gi|152987701|ref|YP_001346112.1| hypothetical protein PSPA7_0717 [Pseudomonas aeruginosa PA7]
 gi|150962859|gb|ABR84884.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 1245

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 78/265 (29%), Gaps = 19/265 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGD 55
           M +    ++L L +         A  L       + +   L+ GI T    F    A G 
Sbjct: 1   MQR--LQAVLLLCLACCWPGLATALTLSPEERAWLAEHPELRLGIGTSWPPFEFRDAQGH 58

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           ++G        ++  +  +  ++   P+  + R   L+  +   L          E    
Sbjct: 59  YQGLA---ANYIA--LLQERLRVSMTPVEPRSRTQVLEQARAGRLDLLPGIMATPERQEY 113

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           L F           +  K   +      L G  + V         L     A +     +
Sbjct: 114 LTFPRPYLDFPIIILARKNGPLPKRIDELYGLKVAVVDHYAPHELLV----ARHPDLTLL 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               V     A    + DA+ GD ++              +          LA A+ +G+
Sbjct: 170 PLPSVAAALQALATGQADAFVGDFASSVWNLRQLKLSGLEISGETPYRYQ-LAMAVPRGE 228

Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259
                I+    +A + AEE+   Q 
Sbjct: 229 PILAGIIDKV-FADLRAEEIDRLQA 252


>gi|326329395|ref|ZP_08195719.1| extracellular solute-binding protein, family 3 [Nocardioidaceae
           bacterium Broad-1]
 gi|325952721|gb|EGD44737.1| extracellular solute-binding protein, family 3 [Nocardioidaceae
           bacterium Broad-1]
          Length = 284

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 67/225 (29%), Gaps = 11/225 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
                   S  A+ L  +K+ G L  G +      +       + KGF+     A++  +
Sbjct: 29  SAAGGAPASCKAADL-PLKQDGKLTIGTDSPAYEPWFSEDDPSNGKGFESAVAYAVAEQL 87

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                 + ++       +     K+ D        T  R     + F    Y   Q  + 
Sbjct: 88  GFAKDDVVWVKQAFNTSYTP-GEKKFDFDINQISITPERAGV--VDFSKGYYTASQAVVT 144

Query: 132 HKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            ++      S++ L G  +  Q  TT+   + +          P+VF+  ++   A    
Sbjct: 145 MEEDAAKAASLADLKGLKLGAQTATTSLTAIREDV---QPTTDPLVFDTSDQAKQALLNG 201

Query: 190 RCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + DA   D+  A Y      +  +                   + 
Sbjct: 202 QVDALVFDLPTAFYITAAEIEGSTITGQFESSEKPEEFGLLTEKD 246


>gi|309388401|gb|ADO76281.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 261

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 63/223 (28%), Gaps = 9/223 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             +     +  G       +     +G  +GF++D    +S     +   +++       
Sbjct: 25  AQVGAEDLIVVGTGGNYNPWCFQ-KDGKLQGFEIDVWHEISKRTGYE---VEFKIAEFSG 80

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               L + +ID ++     T  RE      F     +    FI+       S+  L    
Sbjct: 81  LMGMLDTNKIDTVAHQMSITPEREK--KYVFTKPYAYSKYDFIVKNDSSYQSMEDLKNKK 138

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I    G   + TL +             +     ++    + R DA         ++   
Sbjct: 139 IGAWLGGNGQRTL-ENLDKEKELKLNKKYYDGAPLEKLVESGRLDACWQSAVKSKSVIEQ 197

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI--VSWTHYAM 248
            +     + +   I     A A  +       I  ++    AM
Sbjct: 198 ENMDLRLMGVNTTIGTEINAYAFTKNSNNQKKITEINKAINAM 240


>gi|189182925|ref|YP_001936710.1| amino acid ABC transporter substrate binding protein [Orientia
           tsutsugamushi str. Ikeda]
 gi|189179696|dbj|BAG39476.1| amino acid ABC transporter substrate binding protein [Orientia
           tsutsugamushi str. Ikeda]
          Length = 267

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 9/193 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K   L  G       +   K + +  G D+D  + +   +  +   +     +     LA
Sbjct: 48  KSNVLLVGTAADNPPYEFFKDD-EIVGLDIDIVKLIGQDLGKE---VVIKNFDFPGLLLA 103

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L SKQ+D++      +  R+    + F  +        +       +    + G  I  Q
Sbjct: 104 LSSKQLDLVIAGLSKSDQRKEY--VNFSNVYLTSKVAVLFRTDSNFADCQDIKGKIIGAQ 161

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT    +A+     +        +    +    ++   DA   +     A K   D P
Sbjct: 162 LGTT-WQNIAENINKDSDNSKLRFLDNNLILVEELKSKIIDAVILEDIQ--AAKFVADNP 218

Query: 212 SEHVILPDIISKS 224
                + D     
Sbjct: 219 KLKKFIIDDSISE 231


>gi|320354404|ref|YP_004195743.1| PAS/PAC sensor hybrid histidine kinase [Desulfobulbus propionicus
           DSM 2032]
 gi|320122906|gb|ADW18452.1| PAS/PAC sensor hybrid histidine kinase [Desulfobulbus propionicus
           DSM 2032]
          Length = 1251

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 89/297 (29%), Gaps = 21/297 (7%)

Query: 6   FVSILCLIILFFTSFSTNAS------ILGD----IKKRGFLKCGINTGLVGFAEVKANGD 55
            + +L L +    S ++            +          L    +T          +G+
Sbjct: 28  LLLVLALSVCLSGSPASAGDPPGVGLTAEERAWLAHNPDKLTLYFSTDFPPIEFASTSGE 87

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G   D    +   +      I+       +   AL S +   ++     T  RE    
Sbjct: 88  FTGMGADLIALVEKQLG--IRFIKRPAQTWNQLLAALASGEC-AVAPTIVRTAERERY-- 142

Query: 116 LAFRPITYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F           I         S++ L G  +   +G  TE  L D       ++  +
Sbjct: 143 ALFTAPYATVPVVLITTRAIHDTISLNALPGRRLGAVSGFVTEHYLRDLA---QGRFEVV 199

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               V E          DA+  +++        +  P    +  +      L+  + +  
Sbjct: 200 PVANVAEGLRKLSFGELDAFAENLAVAAYSIEQDGLP-NLRVAGNTDYVFALSIGVNRSY 258

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
              Y+ +     A+  A EL   ++    +  D+ +P+ +R L +     I   LGL
Sbjct: 259 PLLYSSIQKALAAVPPA-ELEQVRRRWISLRTDSLSPETRRLLWLIGCFTIMLLLGL 314


>gi|162149590|ref|YP_001604051.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161788167|emb|CAP57772.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 538

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 75/231 (32%), Gaps = 14/231 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
             G L    N  L   + +   A GD  G D+D  RAL +        + ++ ++    F
Sbjct: 60  ADGTLTVCTNPTLPPMSFMGGAAGGDMVGEDIDVGRALGA---YWHVPVTFVSMDFVGLF 116

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI 148
            +L + +  I+         RE                  +       ++S++ LSG  +
Sbjct: 117 PSLAAGRCGIVISGVLRQQAREARFD---AVPYQPTALVVVARAGTARVASMAALSGKVL 173

Query: 149 CVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            VQ+GT+    +A        A         +   +E+       R  A+      LY  
Sbjct: 174 AVQSGTSYAARVAQENTALAAAGRPPIIIQQYPTEDEVVQQVLIGRAFAFVSQDVELYFR 233

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +         ++ PD       A  + + D +    +     A+  + ++ 
Sbjct: 234 QAQLHGKVAVIVQPDYPEYRDFAIYMRK-DAQDRARLQDAVTALRDSGQMA 283


>gi|221066756|ref|ZP_03542861.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
 gi|220711779|gb|EED67147.1| extracellular solute-binding protein family 3 [Comamonas
           testosteroni KF-1]
          Length = 273

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 78/245 (31%), Gaps = 15/245 (6%)

Query: 4   DFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61
            F   +  L  L   S S +   I   ++ RG +K  I     G       +G  KG D+
Sbjct: 9   RFVAKMGILSSLCLNSISISAGPIFDRVQSRGIVKVCIWPDYYGVTFRDPRSGSLKGIDI 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    L+  +     +++Y+  +  +    L   + D+          R+    L F   
Sbjct: 69  ELSAELAKDLG---VRLEYVDSSFLKIIPDLLGLRCDVAMFAVGMLPQRKE--KLNFTAP 123

Query: 122 T-YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               D  G        +   + +   G  + VQ GT  E  +       N     +  E 
Sbjct: 124 YLRSDIYGISTKTNPAVKKWADIDKPGVQVAVQRGTFMEPVMRQSLNYAN----VVAVEL 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +  +    A R D +  D      L       ++ ++ P      P   A+   D +W 
Sbjct: 180 PQTREKELMAGRVDVFMTDYPYSRRLLDGA-DWAQLIVPPKPFYILPYGYAVNPNDPQWL 238

Query: 239 NIVSW 243
             ++ 
Sbjct: 239 ARLNR 243


>gi|325063478|gb|ADY67168.1| ABC chain amino acid transporter, periplasmic ligand binding
           protein [Agrobacterium sp. H13-3]
          Length = 240

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F      GD  G DV+  R + + I      I+++     +    L     D+    T
Sbjct: 9   PPFNYRNECGDVTGCDVELARVILAMIG--IHDIEFIETEFSQLLPGLNENLWDM---TT 63

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY- 163
                 E    + F    +    G ++ K     ++  L G +   +    T + + D  
Sbjct: 64  GLFDTAERRKIVTFSHPIWALPDGLLVRKG----NLRDLGGYASAAKNPECTLVAIRDQI 119

Query: 164 -----FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVI 216
                 +A       ++ E  +E   A    R DAY     A       N         +
Sbjct: 120 QHRAIMEAGVPDDRILICETYDEAAQAVLDGRADAYASVAMAHLGFMQQNPELDLEVVSV 179

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           LP     +  A A  Q D E  + V       + ++E  +  +N
Sbjct: 180 LPKERPAASGAFAFRQSDRELQSAVDAALLCYIGSDEHRVLMRN 223


>gi|215275619|sp|Q47XX8|MLTF_COLP3 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
          Length = 501

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 81/240 (33%), Gaps = 14/240 (5%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     + I   ++L       ++S L  I  RG++  G   G            + G
Sbjct: 1   MTKFTSLLLVIFTTVLLSACDKENDSSSLSRILARGYINVGTIFG--PTNYYTTANGFAG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F+ +  +  + ++  +   +    L+       L + ++D+L+     T  R       F
Sbjct: 59  FEYELAKQYADSLNVELRIVPTYSLDELFIK--LNTGEVDLLASGLSITDKR--LQRFRF 114

Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVF 176
            P      Q  +  +       V+ L+G ++ V +G++    L    + ++   +     
Sbjct: 115 APSYETISQKLVFKQGNVRPRKVADLTG-TLMVTSGSSYVENLEKLKQTNSELAWQESTE 173

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              EE+     +   D    D + L   +      S    + +     PLA  + +   +
Sbjct: 174 FDSEELLRKVLSGEIDYTIIDSNNLAINRRYYPEISIGFSINEP---EPLAWMVSENSHD 230


>gi|241202969|ref|YP_002974065.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240856859|gb|ACS54526.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 291

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 85/263 (32%), Gaps = 30/263 (11%)

Query: 6   FVSILCLIILFFTSFSTNAS-------ILGDIKKRG---------FLKCGINTGLVGFAE 49
           F++      + F+S + +A        +L D ++R           L+   +     F  
Sbjct: 14  FLAFGLFFGVLFSSLAASAQQVSPSLPLLFDARERLARPDLSSLVRLRFLTSVDFPPFNF 73

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              NG   GF+VD  R + S +     K Q   +   +   AL + Q D +      T  
Sbjct: 74  TDQNGKLSGFNVDLAREICSELEIS-DKCQIQAIPFADLRDALAASQGDAVIAGFAVTP- 131

Query: 110 REISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
            E+     F          F+ +        + S LS   + V  GT  E  LA +F   
Sbjct: 132 -ELRRQFVFSRPYLMLPARFVRNLAVPLDGKTASALSSHPVGVVRGTVHEAMLAAFFPTL 190

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIIS 222
             +     F+  + + AA R  + DA   D   L     +          +   L +   
Sbjct: 191 KAE----PFDTKDALLAALRDRKVDAAFADALQLSFWVSSPASAKCCALFDGPYLSEHFL 246

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
              +   + Q D+   + +    
Sbjct: 247 GEGMTIMLRQKDSVLTSAIDHAL 269


>gi|58040006|ref|YP_191970.1| amino acid ABC transporter permease [Gluconobacter oxydans 621H]
 gi|58002420|gb|AAW61314.1| Amino acid ABC transporter binding protein and permease protein
           [Gluconobacter oxydans 621H]
          Length = 508

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 69/254 (27%), Gaps = 23/254 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKA--NGDWK 57
           M K F + +   I     + +              L    +    V +            
Sbjct: 1   MKKLFALLLALAISSVSIALA------DAPAASQELLWASDGEANVPYVFHDPAHESQMT 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+ +    +++ +     K++++  +       L      ++    + T   +    + 
Sbjct: 55  GFEYELVNEIAARM---HRKVKFIQNDWDGLIPGLSRGLYGMVLDGIEMTPEHKA--AVL 109

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y   +  I+   +        L G +I     TT E  L     ++        +
Sbjct: 110 FSRPYYVTSERIIVRHDQNGLDTMDALKGHTIGTIKDTTAERMLRRQGGSN-----VRSY 164

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E      +  R  R DA   D          +    +  ++ + I       A    +  
Sbjct: 165 EEETNAFSDLRNGRLDAILLDAPIALYYGSISP---DMKLVGEPIGSMEYGIAFSPENRA 221

Query: 237 WYNIVSWTHYAMVT 250
             + V      ++ 
Sbjct: 222 LRDQVDAALGEIIQ 235


>gi|159185730|ref|NP_357190.2| ABC transporter, substrate binding protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140864|gb|AAK89975.2| ABC transporter, substrate binding protein [Agrobacterium
           tumefaciens str. C58]
          Length = 311

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 14/184 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L   ++ G    A          G D D+  A++ ++     +++ + +   +  L L
Sbjct: 62  GKLTVAVSPGGPPLATYATDAKTVVGADPDYALAVADSLG---LELELVAVAWADWPLGL 118

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASIC 149
            S + D +  N   T  R+      F         GF +        I      +G  I 
Sbjct: 119 ASGKYDAVISNVGVTEQRKE--KFDFS-TYRQGLHGFFVKSDSGITEIKEPKDTAGLRII 175

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L  +   +            ++       A  A R D      + L  + 
Sbjct: 176 VGAGTNQERILLKWSDENVAAGLKPIELQYYDDEATRFVALSAGRADVIVQPHAQLVFIA 235

Query: 206 LTND 209
             + 
Sbjct: 236 ARDK 239


>gi|111019222|ref|YP_702194.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110818752|gb|ABG94036.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 330

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 68/239 (28%), Gaps = 19/239 (7%)

Query: 23  NASILGDIKKRGFLKC-GINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            A +   I+ RG L   G              +    G + DF   +   +     K+  
Sbjct: 68  AAKVPQQIRDRGTLIVTGSAGSAPPLRFYADDDKTLIGSETDFAYLIGDVLG---LKVDL 124

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138
              +  + F+ + S + D    N   T  R+      F      D   F   K     I 
Sbjct: 125 QAADWAQNFVRIDSGEADAFISNVTVTEERKE--KYDFS-TYRLDTVAFETKKGSGIQIK 181

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAY 194
               ++G  I V +GT  E  L  + + +            ++ V +      + R DAY
Sbjct: 182 EPKDVAGLKIAVSSGTNQEALLVKWSEQNVAAGLEPTDITYYQNVTDYYLPLASGRIDAY 241

Query: 195 TGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            G   +                     D +    +A    + +      V+     ++ 
Sbjct: 242 FGPNPSSSFHVAQAGESEIAGTFSGAGDALQGE-IAVLTKKDNG-LVTAVNEAINHIIE 298


>gi|89070397|ref|ZP_01157704.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [Oceanicola
           granulosus HTCC2516]
 gi|89044044|gb|EAR50219.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein [Oceanicola
           granulosus HTCC2516]
          Length = 214

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 58/204 (28%), Gaps = 16/204 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +  +G+  GF+++    L +         +++  +       L S
Sbjct: 27  TVRLGTEGAYPPYNFIDDDGEVAGFEIELGNELCARA---ELTCEWVMNDWDSIIPNLVS 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D++      T  R+    + F    +       +   +         G  +  Q  T
Sbjct: 84  GNYDVILAGMSITDERDEV--IDFTQDYFPPTASAYLGASEDADW----QGGVVAAQTAT 137

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +A            + F   EE  AA R    DA   D   L             
Sbjct: 138 IQAAHVAT------GDAVLLEFATPEETVAAVRNGEADAVFADKDYLVP-IAEASGGELV 190

Query: 215 VILPDIISKSPLAPAIIQGDTEWY 238
            +  ++     +   + + DTE  
Sbjct: 191 FVGDEVALGGGIGAGVRESDTELR 214


>gi|295095775|emb|CBK84865.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 310

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 77/250 (30%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++  + + +     + ++  L 
Sbjct: 61  GKFTVAVAGLNQPPLTVFSDDNKTLLGSEVDIARLVADSLGLELNVVP---TSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I+S      ++G  I
Sbjct: 118 VASGKYDAAISNITVTKARKE--KFDFA-TYRKDSLGFYVKSTSPINSLVKAEDIAGLRI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +  K    + PI  +       A ++ R DAY G        
Sbjct: 175 IVGSGTNQEAILLAWNEENLKKGLKPFTPIYTKDDAAQTLALQSGRADAYFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
              N +      +     K+      ++  +     V       +   +         + 
Sbjct: 235 AALNGKTKLVGSVDGGWPKAAHIAVTLKKGSGLVEPVQTALNGAIKNGDYDKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +   + +V 
Sbjct: 295 VERIPSSEVN 304


>gi|218777897|ref|YP_002429215.1| extracellular solute-binding protein family 3 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759281|gb|ACL01747.1| extracellular solute-binding protein family 3 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 406

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 85/257 (33%), Gaps = 12/257 (4%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKC--GINTGLVGFAEVKANGDWK 57
           M K   FV +  LI  F ++  +++S     +    L     +           ANG   
Sbjct: 1   MLKSNCFVIVAVLIYTFLSAGFSHSSSAQAFQPSQPLTVKAAVLKNFPPHYTTDANGKPS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF VD    ++     +      +  + ++ F AL+S + D++      T  R+     +
Sbjct: 61  GFAVDVLERVTQ--IANIQVEYIVKEDWQDVFEALKSGEADLIPDQ-GITERRKQWFDYS 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      F++ + +G+ S+  L G    V A    E  +A           PIVF+
Sbjct: 118 LSTE-ACPIGIFVLSETEGVESLDDLIGKKTAVVALNVGEAIIAKRSA-----IKPIVFD 171

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            VE    +  +   DA       +                   +       A+ +G+   
Sbjct: 172 NVEAALLSLLSGNVDALIFPEPVIMMFAREARVDRRIKRAGSPLRTVKRGIAVRKGNITL 231

Query: 238 YNIVSWTHYAMVTAEEL 254
            N ++      + ++E 
Sbjct: 232 LNRLNPAIEQFLQSKEY 248


>gi|86607286|ref|YP_476049.1| polar amino acid ABC transporter (PAAT) family, amino acid-binding
           protein [Synechococcus sp. JA-3-3Ab]
 gi|86555828|gb|ABD00786.1| polar amino acid ABC transporter (PAAT) family, amino acid-binding
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 278

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 74/231 (32%), Gaps = 21/231 (9%)

Query: 25  SILGDIKKRGFLKCGINTGL-VGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           S   +I+ RG ++ G++  L   +         + GF+ D   AL+  +     +++ + 
Sbjct: 28  SRWAEIQARGRIRVGLDPSLGPAYLYTDLERQTYAGFEWDILEALAQTL---QVRVEPVY 84

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHKKK--- 135
           +   E+  ALQ+ ++D++         RE               Y   Q  ++       
Sbjct: 85  VAWSEQLAALQADEVDLIWGA------REALGLDPQQFLATRPYYLSPQRLVVRDPGPEE 138

Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I ++SQL G  + +   +T    L  Y +              + + A  +A + DA 
Sbjct: 139 APIEALSQLFGRKVGIVVNSTGAALLEAYNERRGNAIRLFATSNPDRLFAQLQAGQLDAV 198

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D              S   +    +   PL   +          V    
Sbjct: 199 LVDQPVAALSLRQAG--SRLRLAGPPLFPIPLVGVVSSQHPSLKEAVDGAI 247


>gi|325519631|gb|EGC98975.1| extracellular solute-binding protein [Burkholderia sp. TJI49]
          Length = 75

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 1  MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
          M   K    + +C +++   S + +A  L  +K+ G L   +      F+ +  +G   G
Sbjct: 1  MKWTKR-LTTTICAVLVGAASLTAHADDLDKVKQTGKLTFALTGKYPPFSFIDESGKLSG 59

Query: 59 FDVDFCRALSSAIF 72
          FDVD    ++  + 
Sbjct: 60 FDVDIGDRVAGRLG 73


>gi|190890230|ref|YP_001976772.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190695509|gb|ACE89594.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 287

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 72/220 (32%), Gaps = 14/220 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GF+VD  R +   +     K Q   +   +   AL + 
Sbjct: 56  LRFLTSVDFPPFNFTDQNGKLSGFNVDLAREICGELEIS-DKCQIQAIPFADLKDALAAS 114

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+ +        + + L+G  + V  G
Sbjct: 115 QGDAVIAGLAVTP--ELRRRFVFSRPYLMLPARFVRNLAAPVEGKTAAALAGRPVGVVKG 172

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  LA +F A   +     F+  E + AA +  + DA   D   L     +      
Sbjct: 173 TVHEAMLAAFFPALKAE----PFDTKEALLAALKERKVDAAFADALQLSFWVSSPASDKC 228

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +   L +      +   + Q D+   + +     A+
Sbjct: 229 CALFDGPYLSEHFLGEGMTIMLRQKDSVLTSAIDHALAAL 268


>gi|312866490|ref|ZP_07726708.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
 gi|311098184|gb|EFQ56410.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
          Length = 277

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 12/204 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K  F++ L L +   T  + ++      K+   +    ++    F     +    G+
Sbjct: 1   MKLKKIFLTSLVLGLGTLTLAACSSKSGSTAKQD--IVVATDSDTAPFTFTGKDNKQTGY 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  +A+          +++     +     + S +  I + + ++   R       F 
Sbjct: 59  DIEVMKAVFK--GSKKYNVKFETTEFESILPGIDSDRYQIAANDFNYNADRAK--KYLFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177
                     +         + QLSG S    AG+    TL D+ KA+  K    V    
Sbjct: 115 DPISLSNYAIVTKSGTKYDKLEQLSGKSTEALAGSNYAQTLEDWNKANPDKDPIKVNYVS 174

Query: 178 ---RVEEIDAAYRAHRCDAYTGDI 198
                          + D    D 
Sbjct: 175 GQTGFTSRLQDLDQGKIDFIFYDQ 198


>gi|300362597|ref|ZP_07058773.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300353588|gb|EFJ69460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 537

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 85/297 (28%), Gaps = 35/297 (11%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW---------KGFDVDFCRA 66
            FS+N++     KK   LK G+      +       ANG            G+DV   + 
Sbjct: 21  GFSSNSTQTEAAKKEAPLKIGMEANYPPYNWTQTTDANGAVPIDGSKQYANGYDVQITKI 80

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +     K+            AL S +ID++      T  R     + F        
Sbjct: 81  IGKKL---HRKVVVEKTEWDGLLPALTSGKIDLIIAGMSPTAERRK--AINFSEPYRKST 135

Query: 127 QGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
              I     K      ++   GA +  Q GT     +     A               + 
Sbjct: 136 FVVITSKTGKFAQAKGLNDFKGAKLTAQQGTLHYDLIKQLHGAKREP----AMRSFSAMR 191

Query: 184 AAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            + ++   D Y  +     + K  N        ++          S  +  + +G+TE  
Sbjct: 192 QSLQSGTIDGYVAEDIEYQSYKAVNPNIVAVNLNKMQGFKVAHDDSITSIGVKKGNTELL 251

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP------DVQRFLGIDKSSNIGEAL 289
           N V+     +   +   +    + +  +  ++        +    G      +G  L
Sbjct: 252 NQVNSILNGISKKKRDQLMADAVKEQPQAGSSKKENWFMSIMHRYGSMILGGVGMTL 308


>gi|42527594|ref|NP_972692.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Treponema denticola ATCC 35405]
 gi|41818422|gb|AAS12611.1| amino acid ABC transporter, amino acid-binding protein, putative
           [Treponema denticola ATCC 35405]
          Length = 277

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 84/252 (33%), Gaps = 15/252 (5%)

Query: 3   KDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           K  F +++ L  L F+         S+N   L ++  R  +  G+N             +
Sbjct: 8   KAVFFAVILLFSLIFSCKKNEINEISSNDVSLAEVLVRSKIIVGVNAYNPPICFYNNKNE 67

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD+D    ++  +        +  +   E    + +  ID ++    ++  R  +  
Sbjct: 68  IIGFDIDVFEEIADIMNIKAE---FRTIVPTEVNELINTGAIDCIASGFSYSDER--NEA 122

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-AHNMKYHPI 174
                    +    +  + + I +++ L G  I  Q G+     + +       +     
Sbjct: 123 YELSQAYLRNSVVILTLRSRNIRTMADLKGKKIGGQKGSLGADLIKNNPDLMSQIHSLND 182

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +E + +I    +    DA  GDIS +      N     + ++   I+      A  +G+
Sbjct: 183 SYENIPQILEDLKTLGIDACVGDISLMAEYL--NKESGVYSLVEQAIALDSYVYAFKKGN 240

Query: 235 TEWYNIVSWTHY 246
                 +    Y
Sbjct: 241 KALKAEIERVLY 252


>gi|307693896|ref|ZP_07636133.1| extracellular solute-binding protein [Ruminococcaceae bacterium
           D16]
          Length = 290

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 41/266 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------------------------LGDIKKRGF 35
           M K   +++   +     + S+  +                          +  +K +G 
Sbjct: 1   MKKFLSLALALTLCASLAACSSGGNTSGSSSGSDNTSGSGSGSSSQTQTSDMQYVKDKGT 60

Query: 36  LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  GI T        +  + +W GFD D  +A + ++  +   +++  +    +   L S
Sbjct: 61  LVVGI-TYFAPMDYKEEGSDEWIGFDADMAKAFAESLGVN---VEFQEITWDYKVEELNS 116

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           K ID +      TL  ++   +        + Q  I          +   G +       
Sbjct: 117 KAIDCVWNGM--TLSDDVMAAMGTSVPYCTNYQTLIYPAD----KAADFEGLTSLEGLNI 170

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD---ISALYALKLTNDRP 211
             E   A    A  +    +  +          A   DA   D    + +     +    
Sbjct: 171 AVESGSAGEDAALALGATTVPVQAQSNALMEVSAGTSDAAVIDVLMAAEMTGEGTSYADL 230

Query: 212 SEHVILPDII--SKSPLAPAIIQGDT 235
              + L D              QG  
Sbjct: 231 VYSLNLNDAQGLESEEYGVGFRQGSD 256


>gi|209544821|ref|YP_002277050.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532498|gb|ACI52435.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 517

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 75/231 (32%), Gaps = 14/231 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
             G L    N  L   + +   A GD  G D+D  RAL +        + ++ ++    F
Sbjct: 39  ADGTLTVCTNPTLPPMSFMGGAAGGDMVGEDIDVGRALGA---YWHVPVTFVSMDFVGLF 95

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI 148
            +L + +  I+         RE                  +       ++S++ LSG  +
Sbjct: 96  PSLAAGRCGIVISGVLRQQAREARFD---AVPYQPTALVVVARAGTARVASMAALSGKVL 152

Query: 149 CVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            VQ+GT+    +A        A         +   +E+       R  A+      LY  
Sbjct: 153 AVQSGTSYAARVAQENTALAAAGRPPIIIQQYPTEDEVVQQVLIGRAFAFVSQDVELYFR 212

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +         ++ PD       A  + + D +    +     A+  + ++ 
Sbjct: 213 QAQLHGKVAVIVQPDYPEYRDFAIYMRK-DAQDRARLQDAVTALRDSGQMA 262


>gi|148982287|ref|ZP_01816694.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrionales bacterium SWAT-3]
 gi|145960552|gb|EDK25909.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrionales bacterium SWAT-3]
          Length = 249

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 79/221 (35%), Gaps = 11/221 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  K++Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-QLQGFEVDLWDEIGKR---NDYKVEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIKGIEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSYDK--DGKINVKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              P +    P    ++           +    V+    AM
Sbjct: 188 TGLPLQLAGQPFETIENAWPFVDNDNGKKLQAEVNEALAAM 228


>gi|323698342|ref|ZP_08110254.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323458274|gb|EGB14139.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 244

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 79/252 (31%), Gaps = 20/252 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+       LC ++      + +A             CG+  G   +  +   G+  G D
Sbjct: 1   MHLVISACCLCFVLAPLVVRAQDAP----------FHCGMARGYPPYQFLNDAGEPTGLD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    + + +      +  +     +   +L+  ++D +    +    R         P
Sbjct: 51  MEVAELVFARLGIKARMVPGI---WDDVVASLRLGRLDCVI-GMEINSERRPFFEFT-SP 105

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   F+    +GI +V  L   ++     +  E  L    +        +     +
Sbjct: 106 YYNRRVVVFVNRDDQGIRTVDDLVLKAVAGDRHSFVERYLRQ--RGLLDSIRIVKTRSKD 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +     +  +  A    ++    L      P   + + D  S  P+  A+++G++E    
Sbjct: 164 QSMRMLKEGKVVAVIAPLAVGRLLAERYALPVRVIDVGDPGS--PVGFAVVKGNSELRRK 221

Query: 241 VSWTHYAMVTAE 252
           +       + AE
Sbjct: 222 LDDALQG-LKAE 232


>gi|222109010|ref|YP_002551276.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium radiobacter K84]
 gi|221727932|gb|ACM30982.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium radiobacter K84]
          Length = 262

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 77/238 (32%), Gaps = 17/238 (7%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K F   ++ L +I L   S +   +      +   ++ G            ++  ++G
Sbjct: 1   MRKLFRSILAALAIITLLPASLALAEA------ESKVIRVGATVDAYPLWFS-SDNKFQG 53

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F VDF  A++         I+++  +      +L + ++D +  +      R+       
Sbjct: 54  FIVDFLNAVADKSGYK---IEWVIADWTGVVASLGTGRVDTI-GSFAVLPERQNVYDYGA 109

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             I            K+ I ++  L G  + V+ GT+    +        +      +E 
Sbjct: 110 PYIYESATIAVSDKSKENIQTLQDLYGKKVAVEFGTSYVKAVQALDPEGKI--TLSTYEG 167

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLT--NDRPSEHVILPDIISKSPLAPAIIQGD 234
            + + +   + R DA     + L A               L + IS  P A       
Sbjct: 168 HDVLLSEAVSGRVDALVAGRNLLLAKIKARGLGLKVVGNPLNETISALPFARTERGAK 225


>gi|15595772|ref|NP_249266.1| hypothetical protein PA0575 [Pseudomonas aeruginosa PAO1]
 gi|9946445|gb|AAG03964.1|AE004493_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 1245

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 81/264 (30%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +   V +LCL   +            +   + +   ++ G++T    F      G ++
Sbjct: 1   MQRLQAVLLLCLACCWPGLAGALTLTPEERAWLAEHPSIRLGMDTSWPPFEYRDEQGRYQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G    +       +  +   +   P+  K     L+  +   L          E    L+
Sbjct: 61  GLAAGYI-----GLLQERLSVSLTPVEPKTWTQVLEQAKDGRLDLLPGIMATPERQEYLS 115

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F           +  K   +      L G  + V         L     A +     +  
Sbjct: 116 FTRPYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI----AQHPDLTLLPL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             V     A    + DA+ GD  S+++ L+       E  I  +   +  LA A+ +G  
Sbjct: 172 PSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLE--ISGETPYRYQLAMAVPRGQP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259
               IV     A ++A E+   Q 
Sbjct: 230 ILAGIVDKVL-ADLSAGEIERLQA 252


>gi|313899521|ref|ZP_07833030.1| ABC transporter, substrate-binding protein, family 3 [Clostridium
           sp. HGF2]
 gi|312955628|gb|EFR37287.1| ABC transporter, substrate-binding protein, family 3 [Clostridium
           sp. HGF2]
          Length = 267

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 71/255 (27%), Gaps = 27/255 (10%)

Query: 13  IILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWK-----------GF 59
           + L  T   ++       K  G      G+      F                     G+
Sbjct: 1   MTLLLTGCGSSDDDKNVSKNTGKETFTVGMECNYAPFNWQTKEQTKTSVSIGGAGFCDGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV   R ++  +     +I    ++      AL+S +ID +         RE   G+ F 
Sbjct: 61  DVRVARQIAKDL---DREIVIKKVSWDGLQPALESGEIDAIIAGMTKDETRE--NGIDFT 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              Y      I+ K    +  + +        +   +T   T+ D  K            
Sbjct: 116 SPYYESEMVMIVRKGDKAAKFNDIQQFKGKTIIGQKSTNYDTIIDQIKGVKHAT---PKA 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIISKSPLAPAIIQG 233
              E+  + +    D  T ++         N   +          DI +   +       
Sbjct: 173 TYPEMILSLQNKEVDGITAELPVAEGAVEANKDLTIVHFAKGKGFDIDTSVSVGLKEGSR 232

Query: 234 DTEWYNIVSWTHYAM 248
           D+E +N V  +   +
Sbjct: 233 DSELFNAVQKSLDGI 247


>gi|226361357|ref|YP_002779135.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226239842|dbj|BAH50190.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 323

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 67/239 (28%), Gaps = 19/239 (7%)

Query: 23  NASILGDIKKRGFLKC-GINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            A +   I+ RG L   G              +    G + DF   +   +     K+  
Sbjct: 61  AAKVPQQIRDRGTLIVTGSAGSAPPLRFYADDDKTLIGSETDFAYLIGDVLG---LKVDL 117

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138
              +  + F+ + S + D    N   T  R+      F      D   F   K     I 
Sbjct: 118 QAADWAQNFVRIDSGEADAFISNVTVTEERKE--KYDFS-TYRLDTVAFETKKDSGIQIE 174

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAY 194
               ++G  I V +GT  E  L  + + +            ++   +      + R DAY
Sbjct: 175 GPKDVAGLKIAVSSGTNQEALLVKWSEQNVAAGLEPTDITYYQNATDYYLPLASGRIDAY 234

Query: 195 TGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            G   +                     D +    +A    + +      V+     ++ 
Sbjct: 235 FGPNPSSSFHVAQAGETEIAGTFSGAGDALQGE-IAVLTKKDNG-LVTAVNEAINHVIE 291


>gi|115361201|ref|YP_778338.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115286529|gb|ABI92004.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 237

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 62/217 (28%), Gaps = 16/217 (7%)

Query: 42  TGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                F           GFDVD   AL++ +    +K+ ++  +  +   A+ ++++D++
Sbjct: 2   PNYPPFEYKDPATDKLAGFDVDLGEALAAKMG---AKLNWVETSFDQMMSAVATQRVDMI 58

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTEL 158
                    R     + F       G  F   K      + +  L G  +     T+   
Sbjct: 59  LSGMTDLPTR--RDAVTFVD-YIETGPQFYTLKTRAGEFAQMGALCGKRVGSSRRTSFPD 115

Query: 159 T-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                   +  KA       +  +   +     R +R DA       L            
Sbjct: 116 NTTAWSAENCVKAGKPAIIVVGTDGSSDARMQLRQNRIDAAVQGGETLPYQNSLEQN--A 173

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +  +            + + +T     ++     ++ 
Sbjct: 174 YAPVGKPFLSQYTGIGVAKRNTALSGALTTALNQLIA 210


>gi|15672919|ref|NP_267093.1| amino acid ABC transporter substrate binding protein [Lactococcus
           lactis subsp. lactis Il1403]
 gi|12723873|gb|AAK05035.1|AE006328_3 amino acid ABC transporter substrate binding protein [Lactococcus
           lactis subsp. lactis Il1403]
 gi|326406480|gb|ADZ63551.1| polar amino acid transport system substrate-binding protein
           [Lactococcus lactis subsp. lactis CV56]
          Length = 281

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 69/237 (29%), Gaps = 12/237 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M     V+   L ++   +    +S   D   +   +    +     F    + G+  G+
Sbjct: 1   MRTSLKVTFAALSLIAAGTLVACSSGSKDSSDKAISVVIATDGATKPFTYSDSQGNLTGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  RA+   +     K+++   +       + S +  + + +  W   R       F 
Sbjct: 61  DIEVARAVFKKL--PQYKVKFQVTDFSGISPGIDSGRYQMGANDFGWEKSRAE--KYYFS 116

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     ++ K     +++ L+G S      +    ++ D+ KA+  K   I +   
Sbjct: 117 SPLSKSNNAVLV-KSGTYKTLADLAGKSTIGNPASNYTKSIQDWNKANPDKEIKISYSAD 175

Query: 180 EEI----DAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                       + + D    D         +   D      I  D           
Sbjct: 176 STSINTRFTQVESGKIDFMLYDKISLESAVKEQGFDNLKIEDISMDTGDAEHDGYEY 232


>gi|119356995|ref|YP_911639.1| amino acid ABC transporter periplasmic protein [Chlorobium
           phaeobacteroides DSM 266]
 gi|119354344|gb|ABL65215.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chlorobium phaeobacteroides DSM 266]
          Length = 265

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 50/133 (37%), Gaps = 14/133 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F           +       ++     +G L+ G  +    F+ V  +G+  G+D
Sbjct: 147 MMKRWF---------PVSGNPAPMPVISSTGSKGILRLGTASVTEPFSFVDGSGEIVGYD 197

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  R ++  +      +  + ++      AL S ++D+++     T  R     + F  
Sbjct: 198 IELARYIAKKLDKK---LVIVNMDFGGMIPALMSSKVDMIAACITITDERSR--QVLFSE 252

Query: 121 ITYFDGQGFIMHK 133
             Y  G   ++ +
Sbjct: 253 PYYIGGIAALVRQ 265


>gi|288905471|ref|YP_003430693.1| amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus UCN34]
 gi|288732197|emb|CBI13762.1| putative amino acid ABC transporter, substrate binding protein
           [Streptococcus gallolyticus UCN34]
          Length = 284

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 85/271 (31%), Gaps = 30/271 (11%)

Query: 1   MYKD--FFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M K   + +SI+ + ++           +    +     I     +    ++    F   
Sbjct: 1   MKKKVKWIISIIVVALVGLLIFDKVTKNTSEAKSDSSEKI----TVVAATSSSPKPFTY- 55

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           + +G+  G +++  +A+   +     K++ + +     F  L S +  I   N      R
Sbjct: 56  EEDGELTGQNIELIKAVFEKL--PQYKLKIVKVEFSSIFSGLTSGRYQIAVNNLAKNAER 113

Query: 111 EISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           E      F    + +    I      K K     S L+G S    +G  +   + +Y KA
Sbjct: 114 EK--NYLFTDPIFKNSYVVIFKNGSDKAKTADEWSDLAGLSTVGSSGVNSTTAIEEYNKA 171

Query: 167 HNMKYHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALK----LTNDRPSEHVILPDI 220
           +      + +   +         + + D    D       +    L     +    L   
Sbjct: 172 NPDNTIELNYSSEDLKSQLEGVESGKYDFLVMDKPMFEYYQKEYSLDLTGKTISGDLSTA 231

Query: 221 ISKSPLAP-AIIQGDTEWYNIVSWTHYAMVT 250
           +   P +   + + +T+    ++     +V 
Sbjct: 232 LMSEPYSYFVVGKEETQLAEDINAALKEVVE 262


>gi|288960702|ref|YP_003451042.1| ABC transporter substrate-binding protein [Azospirillum sp. B510]
 gi|288913010|dbj|BAI74498.1| ABC transporter substrate-binding protein [Azospirillum sp. B510]
          Length = 287

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 71/232 (30%), Gaps = 15/232 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
                    S    ++    L+  GI      + +  A G+W GF +   R L+ ++   
Sbjct: 32  ALAQQPAAGSTFDRVRGTKKLRVAGIVGTEPYYHKDIATGEWSGFCMSMARDLAKSL--- 88

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            ++++          L LQ+ +ID +      T  R  +L + F      +    I  K 
Sbjct: 89  EAELEISETTWGNAVLDLQANKID-IMFGLSPTPSR--ALVVEFTRPIMQNTFTIITKKG 145

Query: 135 KGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               S  +L      + V  G+T +L               +  +  +E   A +  R D
Sbjct: 146 LEPKSWEELNKPDIRVAVDIGSTHDLFARRVLPKA----TLVALKTPDEATLAVQTGRAD 201

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTEWYNIVSW 243
                          N      +++P    + P  A    +    +   V  
Sbjct: 202 LVIQVAMLSLVTVKKNPN-VGKIVIPGPAIRQPTCAGVRAEDSPRFRTFVDN 252


>gi|126173469|ref|YP_001049618.1| extracellular solute-binding protein [Shewanella baltica OS155]
 gi|125996674|gb|ABN60749.1| extracellular solute-binding protein, family 3 [Shewanella baltica
           OS155]
          Length = 285

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 19/252 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G N     +A     G+ +G DVD  RA +  +  +   I ++ + AK     L+
Sbjct: 33  KTIKVGYN-DWPPYAWQDPQGEAQGLDVDLMRAFAVYLGCE---INFINVPAKRSHQMLK 88

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASIC 149
           + Q+D+L      T  R+      F      +            +  I     +    + 
Sbjct: 89  AGQLDVLMGA-TMTDERQAY--AHFSSYYRDEELRLFVLDEQKDQINIDKWEDIFTKKLR 145

Query: 150 VQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +   ++     ADY ++          ++    ++        R D   GD  A+  +  
Sbjct: 146 LLVPSSGWYG-ADYQESQYRLEQEHLLVLSPDSDKSVQMLTYGRGDMIVGDTMAMPYIAS 204

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
            +    + V L  ++ ++ +   + +           +    A++   E+     N  Q 
Sbjct: 205 QHQH-IKLVPLKLVLDQNHIHLMLSKASMTPSQLEQFNQAIKALMDNGEI-TRVINKWQQ 262

Query: 265 SKDTTNPDVQRF 276
                  ++ R 
Sbjct: 263 MSLAKQSNMSRL 274


>gi|292492728|ref|YP_003528167.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Nitrosococcus halophilus Nc4]
 gi|291581323|gb|ADE15780.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Nitrosococcus halophilus Nc4]
          Length = 304

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 74/274 (27%), Gaps = 28/274 (10%)

Query: 1   MYKD----FFVSILCLIILFFT------------SFSTNA--SILGDIKKRGFLKCGINT 42
           M K+      V +   + +F              +   +   S L  I +   ++ G   
Sbjct: 1   MKKNKPQCILVQLFSALAMFAGIILIMGCEGTQDTSGADKPRSTLERIHQEKVVRLGY-A 59

Query: 43  GLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
               +A +    G   G   +  + +   +      I+ +          L++K+ DI++
Sbjct: 60  NEAPYAYMDNETGQLTGESPEIAKKILKQMG--IKHIEGVLTEFGSLIPGLKAKRFDIIA 117

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  R   +  +       +           + S   ++         T   + L 
Sbjct: 118 AGMYITPQRCREIAFSKPTYGIGEAFIVQAGNPLNLHSYEDVASHPSARIGVTAGAVELQ 177

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND------RPSEHV 215
                       ++        AA +A R DA+      ++ L    D      RP    
Sbjct: 178 YARSTGIPNDRIVILPDPPSAVAAVQAKRVDAFAATSLTVHNLLAKTDTRIERARPFHDP 237

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           ++         A    + D +     +      +
Sbjct: 238 VINGKTVVGYGAFGFRKEDKKLLAEFNKHLEKFI 271


>gi|269104385|ref|ZP_06157081.1| transglycosylase Slt family [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161025|gb|EEZ39522.1| transglycosylase Slt family [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 483

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 23/271 (8%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTN---------ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K   FF  IL    L  ++++              L  I+K+  ++  ++  L GF  
Sbjct: 1   MKKVMQFFALILMASSLSLSTYALELSPLTSEPYTGDLAVIEKKKVIRVLVSADL-GFYY 59

Query: 50  VKANGDWKGFDVDFCRALSSAIFDD--PSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           +  +G  KG   +        +  +  P  IQ +P+   +    L     D++  N   T
Sbjct: 60  I-EDGQPKGIIAELLAHFEQQLKKEKRPLHIQIIPVTRDQLIPLLIEGYGDLIVANLTIT 118

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             RE  +  +   +               I+ ++QLSG    V+  ++   +L       
Sbjct: 119 ATREKEVSFSDPVLDNISELIVTNKSHPLITEITQLSGQDFWVRKSSSYYRSLLRVNNQL 178

Query: 168 N-MKYHPIVFERVEEIDAAY------RAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
              +  PI    ++E    Y           +A   D   +     T      +   P  
Sbjct: 179 ELQQLAPINIHFIDETIQDYELIEMINVGLINATLLDSHKVKIWLSTMPNIQVNEQFPLR 238

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                +  A+ +   ++  +++     + + 
Sbjct: 239 YKGE-IGWAVRKDSPKFLALINNYIKTVKSG 268


>gi|171318053|ref|ZP_02907224.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171096787|gb|EDT41665.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 237

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 62/217 (28%), Gaps = 16/217 (7%)

Query: 42  TGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                F           GFDVD   AL++ +    +K+ ++  +  +   A+ ++++D++
Sbjct: 2   PNYPPFEYKDPATDKLAGFDVDLGEALAAKMG---AKLNWVETSFDQMMSAVATQRVDMI 58

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTEL 158
                    R     + F       G  F   K      + +  L G  +     T+   
Sbjct: 59  LSGMTDLPTR--RDAVTFVD-YIETGPQFYTLKTRAGEFAQMGALCGKRVGSSRRTSFPD 115

Query: 159 T-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                   +  KA       +  +   +     R +R DA       L            
Sbjct: 116 NTTAWSAENCVKAGKPAIIVVGTDGSSDARMQLRQNRIDAAVQGGETLPYQNSLEQN--A 173

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +  +            + + +T     ++     ++ 
Sbjct: 174 YAPVGKPFLSQYTGIGVAKSNTALSGALTTALNQLIA 210


>gi|85702947|ref|ZP_01034051.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseovarius sp. 217]
 gi|85671875|gb|EAQ26732.1| His/Glu/Gln/Arg/opine family ABC transporter, periplasmic
           His/Glu/Gln/Arg/opine family-binding protein
           [Roseovarius sp. 217]
          Length = 237

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 15/165 (9%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       +  +   G+  GF+ +    L           +++  +       L S
Sbjct: 22  TVRLGTEGAYPPYNFINDKGEVDGFERELGDELCKRA---ELTCEWVTNDWDSIIPNLVS 78

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
              D++      T  R+    + F                   S+   +    I  Q+GT
Sbjct: 79  GNYDVIIAGMSITDERD--QVIDFTQNYTLPDPS----AYLAPSADVDVKSGVIAAQSGT 132

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                +A      +     + +   EE  AA R    DA   D +
Sbjct: 133 IQASYVA------SSGATLVEYATPEESIAAVRNGEADAVLADRA 171


>gi|153011664|ref|YP_001372878.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563552|gb|ABS17049.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 309

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     +  G    A          G D ++  A++ ++     +++ +P+   +  L L
Sbjct: 59  GKFTVAVAPGGPPLATYATDARTVVGADPEYASAIAESLG---LQLELVPVAWIDWPLGL 115

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     ++S       +G  I 
Sbjct: 116 ASGKYDAVISNVGVTEERKE--KFDFS-TYRQGLHGFFVKSDSPVTSIKGPKDAAGLRII 172

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L  + + +            ++       A R+ R D      + L  + 
Sbjct: 173 VGAGTNQERILVKWSEENVAAGLKPIELQYYDDEAASLLALRSGRADVIVQPHAQLVFIA 232

Query: 206 LTNDR 210
             +  
Sbjct: 233 ARDKN 237


>gi|306832865|ref|ZP_07465999.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
 gi|304425004|gb|EFM28136.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus bovis ATCC 700338]
          Length = 274

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 11/176 (6%)

Query: 1   MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   +S   L ++ L   + S  +   G       +K   ++    F     N  +KG
Sbjct: 1   MKKRRLLSFGFLVMLTLALAACSNQSQSSGKT----VIKVATDSDTAPFTYK-ENDTFKG 55

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D  +A+         K++++          + + +  I + + ++   R       F
Sbjct: 56  YDIDVVKAIFKD--SKKYKVEFVTTAFDSILTGVDADRYQIAANDFNYNEERAE--KYLF 111

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                         +     S+  LSG S  V +G+     L  +   +  K    
Sbjct: 112 SDPISKSNYAITSAEGTSYDSLDDLSGKSTEVISGSNYAQVLEKWNDENPDKEPIK 167


>gi|225626822|ref|ZP_03784861.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti str. Cudo]
 gi|225618479|gb|EEH15522.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ceti str. Cudo]
          Length = 289

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 77/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 10  MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 69

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             +   G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 70  NRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--WE 126

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K     +        + V AGT  E  L +YF 
Sbjct: 127 PTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFP 186

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + +  A +  + D    D  +L A   + +       ++   L   
Sbjct: 187 QAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 242

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ + ++   +  +    A+  
Sbjct: 243 YLGSGLSIAVTRQNSALASAFNNALQALQQ 272


>gi|307132037|ref|YP_003884053.1| putative periplasmic binding protein [Dickeya dadantii 3937]
 gi|306529566|gb|ADM99496.1| Putative periplasmic binding protein [Dickeya dadantii 3937]
          Length = 252

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 68/257 (26%), Gaps = 22/257 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
              F   IL +      + S              L   ++          A+G  +G D+
Sbjct: 4   KNIFLAMILGITSFTVFANSPVTG--------KTLNIAVSPASPPMLFKTADGKLEGIDL 55

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   +           ++Y   +      A+ S Q D+       T  R+  +  +    
Sbjct: 56  ELFSSYCQERKCKLKIMEY---SWDGMLGAVASGQADVAFSGISITDKRKKVMDFSSPYY 112

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERV 179
                   +   K  +S +S+L   SI    G      +    +        +  ++   
Sbjct: 113 VNSFNLVSLDSHKIDLSDLSKLKNYSIGFPRGMAYADLIKTDLEPKGYYSLSNVKLYPSY 172

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E     +    D    +    +  K     P E   +    +   L  A  +G      
Sbjct: 173 NETITDLKNGNLDLAFIEDPVYFDYKNKQKMPIESRYVFK--NVDHLGFAFKKGSP---- 226

Query: 240 IVSWTHYAMVT--AEEL 254
            V     A +    EE 
Sbjct: 227 -VRDDFNAWLNEQGEEK 242


>gi|271964433|ref|YP_003338629.1| extracellular solute-binding protein [Streptosporangium roseum DSM
           43021]
 gi|270507608|gb|ACZ85886.1| extracellular solute-binding protein [Streptosporangium roseum DSM
           43021]
          Length = 332

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 77/239 (32%), Gaps = 15/239 (6%)

Query: 21  STNASILGDIKKRGFLKCGINT-GLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +   I+ +G L  G N  G     +    +    G + D    ++  +     + 
Sbjct: 67  AIAAQVPEAIRAKGALTAGFNGEGTPPLVSLADDDTTLIGVETDIAHLVADVLGLKLQE- 125

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
                + +  FLA +S + D++  N   T  R+      F      D   +       I+
Sbjct: 126 --ENTSWENLFLAARSGKYDLVFNNVTVTEERKDI--YDFA-TYRVDQLAWQTAANSPIT 180

Query: 139 SVS---QLSGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRC 191
            +     ++G ++ V +GT  E  L ++   +            +++  +I  A ++ R 
Sbjct: 181 KIEKAADIAGLNVSVGSGTNQEKILLEWDAQNQKAGLKAAQIQYYQKYGDILLALKSGRV 240

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            AY G    +               L    S   L  A+          VS     ++ 
Sbjct: 241 QAYLGPNPPIAYQVAVGGDSKIVGTLSGGSSLEGLIAAMTLKGNGLVKPVSEALNTLIE 299


>gi|312868947|ref|ZP_07729127.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095511|gb|EFQ53775.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 488

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 17/240 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWK----GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
                 N     F    + G +     G +++  + ++     +  K +  P++      
Sbjct: 38  TYTFATNNTFAPFEIQDSKGGYSGKNPGIEIEILKKIAK---HEHFKYKLKPMSFNGDLQ 94

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           AL+  Q+D +      T  R+      F    Y DG    + K   I S+ QL G ++  
Sbjct: 95  ALEGGQVDAVIAGMSVTDERKA--KFDFSKAYYTDGVEMAVAKDSKIHSLKQLKGKTVSA 152

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTND 209
           +AGT+  L L    K +        F+    +    +     A   D   L Y +K    
Sbjct: 153 KAGTSAALFLKKNQKKYGY--QIKYFDSSNTMWNDVKNGNTAATFDDGPVLEYGIKTGVP 210

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                ++    I   P+A    +G      +    +  +    E G  ++ +++ +K   
Sbjct: 211 ---LKIVTKKPIDAQPVAVGFQKGK--NLALQKKINNGIDWLNETGQMKQIVDKYTKSDK 265


>gi|167825400|ref|ZP_02456871.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic
           amino acid-binding protein [Burkholderia pseudomallei 9]
          Length = 105

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +L  +K+ G LK  +      F     +G  +GFDVD  + +++ +   P   Q++   
Sbjct: 28  DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 84

Query: 85  AKERFLALQSKQIDILSRNT 104
                  LQ+ + D++    
Sbjct: 85  WSGILAGLQAGKFDVIVNQV 104


>gi|119468553|ref|ZP_01611644.1| putative transport binding protein [Alteromonadales bacterium TW-7]
 gi|119448061|gb|EAW29326.1| putative transport binding protein [Alteromonadales bacterium TW-7]
          Length = 471

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 84/240 (35%), Gaps = 11/240 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K+  + I+ L++L            L  IK++  ++ G       +      G+ +GF
Sbjct: 1   MFKEKLIIIITLVMLLCACNMQEQPTQLAHIKEQNKIRVGTLASASNY-YQAVQGE-QGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +  +A +  +  +   + +  L+  + F  L+S  +D+++    +   R       + 
Sbjct: 59  EYELSQAFADYLGVELEIVPFFNLS--DMFDRLESGDLDLIASGLTYNKTRAEQYR--YG 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFER 178
           P      Q  +  + +           +  V A ++  LTL    K + ++ +       
Sbjct: 115 PTYRTISQKLVYKQGRVRPRKFDDLDGNFTVIAKSSHSLTLQKAQKNNPSLSWIESEEFD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            EE+  A      D    D   L   +  +       I   +    P+A  + +   +  
Sbjct: 175 EEELLQAVIDGEIDYTLADSHTLSLFRRYHPN---LSIGFSVSHNDPIAWILRKSKDDSL 231


>gi|91784300|ref|YP_559506.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia xenovorans LB400]
 gi|91688254|gb|ABE31454.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 270

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 66/214 (30%), Gaps = 22/214 (10%)

Query: 3   KDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60
           K F       L++    + S  A+             G     V F  +       +G  
Sbjct: 22  KRFASVFATGLLLAGAPALSVAATTYE---------IGATATGVPFTFLDVKTNSIQGLL 72

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A   A   D   ++           +L +K+IDI+S     T  RE    + F  
Sbjct: 73  VDAITATGKAAGFD---VRIEQTTFSALIPSLTTKKIDIISAAMLKTPAREQI--VDFSD 127

Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             Y  G+G I+        +S+  L G  +  Q GT     L        +      ++ 
Sbjct: 128 TVYSYGEGLIVRADDKGQYTSMDDLKGEVVGAQVGTAFVDALNR----KGIFKEVRTYDS 183

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           V +I       R  A  GD   L      N  P 
Sbjct: 184 VADIMRDVALGRIKAGFGDHPILAYQLQHNPNPQ 217


>gi|253688535|ref|YP_003017725.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755113|gb|ACT13189.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 311

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 51/291 (17%)

Query: 1   MYKDFFVSILCLIILFFTSF-----STNASILGDI--KKR-------------------- 33
           M +  F++   +  L  T+      + +A  +  I  K                      
Sbjct: 1   MKRSSFITTTGMATLLSTALVTHVQAQDAGFVSRIDLKANQIPIRIVKNDEAIAQIPAHF 60

Query: 34  -----GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
                G L   ++       + +   N    G D D  R ++  +     +++ +P + +
Sbjct: 61  KFVTPGKLTIAVSALSSPPLSLLADDNKTIVGSDADIARLVADGLG---LELKLVPASWE 117

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQL 143
           +  L + + + D    N   T LR+      F      D  GF +     I+S      +
Sbjct: 118 DWPLGISAGKYDAAIFNIAVTKLRKE--KFDFA-TYRIDTLGFYVKSTSKITSINKPEDV 174

Query: 144 SGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +G  + V +GT  E  L  + + +         P+        + + ++ R DA+ G  S
Sbjct: 175 AGLKVIVGSGTNQENILLGWDRQNRANGLPPVQPVYVTDDAAANLSIQSGRVDAFFGPHS 234

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                     +       P +           Q        +S      + 
Sbjct: 235 IGAYKAALTGKTRMVGKGPTVA----YVAVTTQKGNGLAQAISTAINGAIH 281


>gi|295840210|ref|ZP_06827143.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Streptomyces sp. SPB74]
 gi|197699894|gb|EDY46827.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Streptomyces sp. SPB74]
          Length = 340

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGI---NTGLVGFAEVKANGD-WKGFDVDFCRALSSAI 71
              + +  A +  +IK +G L  G+     G      + ++     G + D  R ++S +
Sbjct: 64  APVADALRAQLPKEIKDKGELVIGVGVLPAGSPPLNFIGSDQKTVTGSESDLGRLVASTL 123

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
              P          +  FL + S ++D+   N   T  R+      F      D   F  
Sbjct: 124 GLKP---VIRKSTWENMFLGVDSGKVDVAFSNVTDTEERKR--KYEFA-SYRQDNLAFET 177

Query: 132 HKKKGISSVSQ---LSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAA 185
           +K    +       L+G ++ V +GT  E  L  +    +    +     +  +     A
Sbjct: 178 NKSASWTFTGDHRVLAGKTVAVSSGTNQERILLAWQRELRKEGKELTVKHYPDLNSTYLA 237

Query: 186 YRAHRCDAYTGDISALYA 203
               + DAY G   A+  
Sbjct: 238 LSGKKIDAYLGPNPAIAY 255


>gi|146328760|ref|YP_001209883.1| extracellular solute-binding fmaily protein [Dichelobacter nodosus
           VCS1703A]
 gi|146232230|gb|ABQ13208.1| bacterial extracellular solute-binding fmaily protein
           [Dichelobacter nodosus VCS1703A]
          Length = 251

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 68/248 (27%), Gaps = 21/248 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V  L  +I   ++ +        ++             +    +  +G   GF+
Sbjct: 1   MRKKTHVFCLTGLITLLSTAAFAEPTYRLVR--------TYPEQMPLNFMGNDGSPSGFE 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLA 117
            +  + ++     D     +    AK     LQ     + D+       T  R       
Sbjct: 53  TELIQEIARRSKLD-----FKEEFAKGTGSVLQRVREDKADLGIGAITVTSERRKI--FD 105

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F           I+ K     +++ L+   +  +  T  E  L     A          +
Sbjct: 106 FSEPYLQVNPITILTKNPEKKTIADLANEPVSCEENTMHEEILKSTENA---PKSIFSEK 162

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                       +  A  GD S ++            + +     K   A A  +GDTE 
Sbjct: 163 TDFLAVKKVLQDKAVATIGDDSYMFGFLENYKDEGIRLFVDPSYEKEHYAIAFKKGDTEL 222

Query: 238 YNIVSWTH 245
            N V    
Sbjct: 223 KNKVDNAL 230


>gi|320093689|ref|ZP_08025557.1| ABC superfamily ATP binding cassette transporter, solute-binding
           protein [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979349|gb|EFW10838.1| ABC superfamily ATP binding cassette transporter, solute-binding
           protein [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 322

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 14/228 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  ++K RG L+ G +          ++G    G+D D  RAL+  +          
Sbjct: 68  AALVPDEVKTRGTLRNGASADYAPGEFRASDGQTVVGYDADLTRALAKVMGLKDGTTS-- 125

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSV 140
                    ++ + + D+   +      RE    +         G  + +          
Sbjct: 126 HAEFPTIIPSIGT-KFDVGISSFTINSEREQQTNMI---AYVQVGSAYGVAQGNPKGFDP 181

Query: 141 SQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +Q  G +I VQ GT  E  +     +   A N     +  +    +       + DA T 
Sbjct: 182 AQPCGKTIGVQTGTAQEEYINKLSQECVSAGNEAITVMPHDVQTSVATKVVGGQYDA-TL 240

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
             S +        +      + D+I  +P   A+ + D      V   
Sbjct: 241 ADSTVIGYTAALSQGK-IEQIGDVIESAPQGIAVNKQDAALTEAVQKA 287


>gi|332042183|gb|EGI78509.1| amino acid ABC transporter solute-binding protein [Hylemonella
           gracilis ATCC 19624]
          Length = 286

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 67/234 (28%), Gaps = 17/234 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           F + S  A         G L+  ++      A  K  G  +GF++D    L+  +     
Sbjct: 23  FCAGSAWAQT-------GPLRTAVDATFAPHAMAKLGGGSQGFNIDLGEELAKRLGRK-- 73

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            I+            L SK+ D L      T  R     + F          F+  K   
Sbjct: 74  -IEIEATEFSGLVPGLNSKRYDFLLAPVTVTPERAK--AMLFTEGYLDTDYTFLGRKGTA 130

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
            + +  L G +I V  G+  E    D    ++ K+    +    +   A  A R D    
Sbjct: 131 PTKLEDLKGKTIAVNKGSNYEGWARDNAAKYDFKFDV--YGSNADAVQAVLATRADYNLA 188

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             + +      N        +   +     A      DT      S     M  
Sbjct: 189 GTTVVAWAAKQNPALQTGYTIKTGLV---WALPFRLDDTAGRAAASNALKCMKQ 239


>gi|222834397|gb|EEE72874.1| predicted protein [Populus trichocarpa]
          Length = 114

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 10  LCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + + +   ++ +     +  L  IK  G +  G  T  + F+   AN    GF  D C  
Sbjct: 1   MAVSLGAGSALAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDANQKVIGFSQDICDR 60

Query: 67  LSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           +  A+  +      +++ +P+ ++ R   +Q+  +D+    T     R+   G
Sbjct: 61  VIDAVKKETGTPNLQVRMVPVTSQNRQSLVQNGTVDLECGVTTNLKSRQQQPG 113


>gi|23501202|ref|NP_697329.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|161618276|ref|YP_001592163.1| extracellular solute-binding protein [Brucella canis ATCC 23365]
 gi|163842581|ref|YP_001626985.1| extracellular solute-binding protein [Brucella suis ATCC 23445]
 gi|254703663|ref|ZP_05165491.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686]
 gi|23347082|gb|AAN29244.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|161335087|gb|ABX61392.1| extracellular solute-binding protein family 3 [Brucella canis ATCC
           23365]
 gi|163673304|gb|ABY37415.1| extracellular solute-binding protein family 3 [Brucella suis ATCC
           23445]
          Length = 280

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 77/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             +   G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 61  NRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIVAG--WE 117

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K     +        + V AGT  E  L +YF 
Sbjct: 118 PTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + +  A +  + D    D  +L A   + +       ++   L   
Sbjct: 178 QAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ + ++   +  +    A+  
Sbjct: 234 YLGSGLSIAVTRQNSALASAFNNALQALQQ 263


>gi|259502042|ref|ZP_05744944.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259170006|gb|EEW54501.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 488

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 82/240 (34%), Gaps = 17/240 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWK----GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
                 N     F    + G +     G +++  + ++     +  K +  P++      
Sbjct: 38  TYTFATNNTFAPFEIQDSKGGYSGKNPGIEIEILKKIAK---HEHFKYKLKPMSFNGDLQ 94

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           AL+  Q+D +      T  R+      F    Y DG    + K   I S+ QL G ++  
Sbjct: 95  ALEGGQVDAVIAGMSVTEERKA--KFDFSKPYYTDGVEMAVAKDSKIHSLKQLKGKTVSA 152

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTND 209
           +AGT+  L L    K +        F+    +    +     A   D   L Y +K    
Sbjct: 153 KAGTSAALFLKKNQKKYGY--QIKYFDSSNTMWNDVKTGNTAATFDDGPVLEYGIKTGVP 210

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                ++    I   P+A    +G  +   +    +  +    E G  ++ IN+ +K   
Sbjct: 211 ---LKIVTKKPIDAQPVAVGFQKG--QNLALQKKINNGIDWLNETGQMKQIINKYTKSDK 265


>gi|304407616|ref|ZP_07389268.1| extracellular solute-binding protein family 3 [Paenibacillus
           curdlanolyticus YK9]
 gi|304343567|gb|EFM09409.1| extracellular solute-binding protein family 3 [Paenibacillus
           curdlanolyticus YK9]
          Length = 272

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 84/252 (33%), Gaps = 15/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K   V+    + L  ++  +     AS   + +    +  G        A +   G+ 
Sbjct: 1   MKKFTVVAFTLALALALSACGSKSKETASGAEEGEAVKKVIVGTGNDFEQVAFLDDKGNL 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-EISLG 115
            GFDV+  R +   + D     ++  +      L+L++K++DI +   +    R E    
Sbjct: 61  TGFDVELIREIDKRLKDYEF--EFQSMEFSNILLSLETKKVDIAAHLFEKNPERTEKFDF 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                  + +           I S+  L G  + +   +     L +Y K H      IV
Sbjct: 119 NQEPYAYWRNKIIVASDNTDPIKSLDDLKGKKVLIGPTSAQAQILENYNKEHEDAKIDIV 178

Query: 176 FERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQ 232
           +++ +  +      + R  A     +      L    P  +   + D +++  +     +
Sbjct: 179 YQQNDANDEVQQISSGRVYA-----TLGADFLLPLKDPQGKLKTVGDPLNEGNILYVFRK 233

Query: 233 GDTEWYNIVSWT 244
            D E   +    
Sbjct: 234 NDPESKKLSDAV 245


>gi|254439224|ref|ZP_05052718.1| Bacterial extracellular solute-binding protein, family 3
           [Octadecabacter antarcticus 307]
 gi|198254670|gb|EDY78984.1| Bacterial extracellular solute-binding protein, family 3
           [Octadecabacter antarcticus 307]
          Length = 266

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 14/241 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      ++  L      +    A   L +++ R  +             + ++G+  G+
Sbjct: 1   MKTHMIAAVAALFATTAPAPPAFADGHLPNLEGR-EIVVVTENAYPPLQFMDSDGNAIGW 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D    ++  +      I Y  ++      A+   Q D+    T  T+  + +  + F 
Sbjct: 60  EYDAMAEVAERL---NITIVYENISWDAMIPAVSQGQFDMGM--TGITIREDRAEVVDFS 114

Query: 120 PITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPI 174
                     ++     +    +S +  S   +  Q GTT   + + D   A        
Sbjct: 115 DSYMTSEMAMLVRGDEDRFSDAASFAADSDLLVAAQPGTTPFYVAVYDVLDADEANPRIQ 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +FE      AA R    D    D  A       +D      ++ + +          QG 
Sbjct: 175 LFETFGAGVAALRNGDVDLVLTDGVAAAGYVDASDGG--LKVVGERLGSEDFGFIFPQGS 232

Query: 235 T 235
            
Sbjct: 233 D 233


>gi|15891517|ref|NP_357189.1| ABC transporter, substrate binding protein [Agrobacterium
           tumefaciens str. C58]
 gi|15159937|gb|AAK89974.1| ABC transporter, substrate binding protein [Agrobacterium
           tumefaciens str. C58]
          Length = 312

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 80/286 (27%), Gaps = 42/286 (14%)

Query: 6   FVSILCLIILFFTSF---STNASILG----------------DIK---------KRGFLK 37
            +S+L   +   T+    + +A  +                  IK           G L 
Sbjct: 7   LLSLLAAGLFTATASLVPAAHAQEVDLSPEQKGRVRAEKVEEAIKLLPAGHKFTADGKLT 66

Query: 38  CGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
                  L             G + D  + ++ ++  +   +     +       L S +
Sbjct: 67  VATVPFRLPLVDYASDTKTPIGVEPDIAQLVADSLGLELQLVPIAWADWPL---GLSSGK 123

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFI---MHKKKGISSVSQLSGASICVQAG 153
            D ++ N   T  R+      F      D  GF      K   I     ++G  + V A 
Sbjct: 124 YDAVTSNITVTEERK--QKFDFS-SYRNDLLGFYVGNNSKVTAIGKPEDVAGLKVIVGAA 180

Query: 154 TTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           T  E  L  + K +  K         ++    +D A ++ R DAY G  +       +  
Sbjct: 181 TNQEQILLKWIKENKAKRLADTEVQYYDDQAVLDVALQSGRADAYLGPNATSAFQAASQK 240

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +            ++       + D      ++    A +     G
Sbjct: 241 KTKLVGTFSGGWPEAAEIAVASKKDAGIAEAITAALNAQIKNGNYG 286


>gi|46580607|ref|YP_011415.1| transglycosylase SLT domain/extracellular solute-binding
           domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450026|gb|AAS96675.1| transglycosylase SLT domain/bacterial extracellular solute-binding
           domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234343|gb|ADP87197.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 505

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 20/248 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L   +    +  + +I++RG L+  +           A+G+ +G +V+  RA ++ +   
Sbjct: 54  LILPAEKAFSGDVKEIRQRGVLRVLV--TYRKGDFFIADGELRGVEVELARAFAAWLGKK 111

Query: 75  ------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQ 127
                 P +  ++P+   E   AL+  + DI +     T  R     + F         +
Sbjct: 112 GGKKALPVRAIFIPVAFDELLTALEQGKGDIAAAGFTVTEARSA--RVPFATPYLRGIDE 169

Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLAD---YFKAHN----MKYHPIVFERV 179
            F + K   + +    L+G ++ V  G++ E  L +      A          P    + 
Sbjct: 170 VFAIRKGAPVPTSLDELAGRTVHVVRGSSHEQHLGELNVRLAAQGLAPLNIVTPSADLQP 229

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E++         D    D       +           L     +  +A A+        +
Sbjct: 230 EDLFDLLGTGAIDLMVADSHRARLWRRAMPDVQVLPSLKLKTGQD-IAWAVRPDAPGLLH 288

Query: 240 IVSWTHYA 247
            V+    A
Sbjct: 289 EVNAFFAA 296


>gi|328544767|ref|YP_004304876.1| ABC transporter substrate-binding protein [Polymorphum gilvum
           SL003B-26A1]
 gi|326414509|gb|ADZ71572.1| ABC transporter substrate-binding protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 274

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 97/267 (36%), Gaps = 18/267 (6%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +  + L     + +A  + DI+ RG L+   I   +  F +    G+W GF +D    ++
Sbjct: 10  VAAVALSVLGGTASAGTIDDIRARGVLRIPAILNEVPYFNKDPRTGEWNGFVIDMASDIA 69

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +     K++ +  +     L +QS ++D+       T     +L ++F   TY++   
Sbjct: 70  KML---DVKLEVVESSWANAILDVQSGKVDMAFA---VTATPVRALSVSFSDPTYYNSFV 123

Query: 129 FIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
            +  K++    +  +L+           +   L    + +    + + F+  +E   A  
Sbjct: 124 IVSAKEEIAGKTWKELNDPKYTFAVDLGSAQDL--ITQQYLPNANILRFKTRDEAIVAVT 181

Query: 188 AHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             + D      + L  L ++   P+   V +P  +  +P   A+  G  E +       +
Sbjct: 182 TGKADGLV--NTMLNGLVISKKAPTIGAVQVPTPVLSTPSVIAVNYGGDEVFKS-----F 234

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDV 273
               AE       N   + K      +
Sbjct: 235 VSAWAEYNRRIGNNQTWILKSLEPFGI 261


>gi|119944195|ref|YP_941875.1| ABC transporter extracellular solute-binding protein [Psychromonas
           ingrahamii 37]
 gi|119862799|gb|ABM02276.1| ABC transporter extracellular solute-binding protein, family 3
           [Psychromonas ingrahamii 37]
          Length = 276

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 81/245 (33%), Gaps = 13/245 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                   L      SFS+ A+ L +I+ +G +          F  V  NG  KG +   
Sbjct: 8   KITGGAFILSCSTLFSFSSQAASLEEIQAKGVMVVATEDSYKPFEYV-ENGTPKGLNH-- 64

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              L+      P +I+   +        L + + D+       T  R     L F     
Sbjct: 65  -ALLALLRAKAPFEIKQQIIPWTGLLAGLSTGKYDVALTAAVVTPTR--LQSLDFTMPIA 121

Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKA----HNMKYHPIVFER 178
              Q +++    + I  VS L   ++ VQ G  +   L++             + I +  
Sbjct: 122 EATQYYVIRADEERIKVVSDLDELTVGVQTGGASYAALSELENKLAISGGKLGNTIQYTS 181

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +        R D        +    LT ++P    I   +   +  A A+ +G+ +  
Sbjct: 182 LPDAYQDLVLGRLDYVING--VVNLTSLTQEKPDLFKIGQAVGVPAYAAWAVDKGNKDLL 239

Query: 239 NIVSW 243
           N ++ 
Sbjct: 240 NYLNS 244


>gi|37678192|ref|NP_932801.1| ABC-type amino acid transport system, periplasmic component [Vibrio
           vulnificus YJ016]
 gi|37196931|dbj|BAC92772.1| ABC-type amino acid transport system, periplasmic component [Vibrio
           vulnificus YJ016]
          Length = 250

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 77/221 (34%), Gaps = 12/221 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
               + +   +K G++     F  VK +   +GF+VD    +          ++Y+  N 
Sbjct: 18  TFQAVAEE-VVKVGMSGRYFPFTFVKQD-QLQGFEVDMWDEIGKRNGYK---VEYVTANF 72

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLS 144
              F  L++ +ID +S     T  R+      F      DG    + K    I  V+ L+
Sbjct: 73  SGLFGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIKGVADLA 130

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++ V  G+  E  L DY K  + K +   ++   E        R DA+  D  +   L
Sbjct: 131 GKTVAVNLGSNFEQLLRDYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALEL 186

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 P +    P     +       +   +    V+   
Sbjct: 187 IKKTGLPLQLAGEPFETIANAWPFVNNERGVKLQGEVNKAL 227


>gi|317154558|ref|YP_004122606.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944809|gb|ADU63860.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 288

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 74/239 (30%), Gaps = 16/239 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           FF  +    +L     +  A     + + G +    + G   F  +  +G+  G+ +D  
Sbjct: 12  FFAILALPGLLAPPCLTAQADATSPVDQPGQMIIAHDAGYPPFCFLDQDGEPTGYLIDLW 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA       +  +I +L    ++    +   + D+           +      F P    
Sbjct: 72  RAFGRE---NDIEITFLLGTWQQSLDMVMDGRADVHGGLV---HSNDRDRVFDFGPELIE 125

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                 +           +       +          D+ +A+      ++F+    +  
Sbjct: 126 LSTHLFVRNGFDARQTQPVGVVRGGYE---------EDFMRANRPTTRLVLFDDNMTMVR 176

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A       A+  D     +  L          + D+I + PL  A+ +G  +  ++V++
Sbjct: 177 AATDGHIPAFVADSP-TVSYCLGLYGARSDFAVSDLIYRKPLQAAVCEGRHDTLDLVNY 234


>gi|296102231|ref|YP_003612377.1| extracellular solute-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295056690|gb|ADF61428.1| extracellular solute-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 310

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 76/250 (30%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++  + + +     + ++  L 
Sbjct: 61  GKFTVAVAGLNQPPLTVFSDDNKTLLGSEVDVARLVADSLGLELNVVP---TSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS---QLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I+S+     ++G  I
Sbjct: 118 VASGKYDAAISNITVTKARKE--KFDFA-TYRKDSLGFYVKSTSSITSLQKAEDIAGLRI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A ++ R DAY G        
Sbjct: 175 IVGSGTNQEAILLAWNAENLKKGLKPFTPVYTKDDAAQTLALQSGRADAYFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++  +     V      ++   +         + 
Sbjct: 235 AALTGKTKLVGSVDGGWPKAAHIAVTLKKGSGLVEPVQTALNGVIKNGDYDKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +     +V 
Sbjct: 295 VERIPQSEVN 304


>gi|300716666|ref|YP_003741469.1| ABC transporter, substrate binding protein [Erwinia billingiae
           Eb661]
 gi|299062502|emb|CAX59619.1| ABC transporter, substrate binding protein [Erwinia billingiae
           Eb661]
          Length = 313

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 79/250 (31%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++     K+  +P + ++  L 
Sbjct: 64  GSFTVAVAALNSPPLTVFSDDNKTLLGSEVDIARLVADSLG---LKLNVVPTSWEDWPLG 120

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I S      ++G  I
Sbjct: 121 VASGKYDAAITNITVTKERKE--KFDFA-TYRKDSLGFYVKTSSPIKSLSKAEDIAGLRI 177

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + K +  K    + P+  +       A ++ R DAY G        
Sbjct: 178 IVGSGTNQEAILLAWDKENQAKGLKPFTPVYSKDDAAQTLALQSGRADAYFGPNVIGAWK 237

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +      +     K+      ++  +   + V+     ++   +         + 
Sbjct: 238 AALTGKTRLVGSVDGGWPKAAHIAVTLKKGSGLVDPVNIALNGVMKNGDYQKVLNRWGEG 297

Query: 265 SKDTTNPDVQ 274
            +   + ++ 
Sbjct: 298 VEAIDHSEIN 307


>gi|254372168|ref|ZP_04987660.1| hypothetical protein FTCG_01551 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569898|gb|EDN35552.1| hypothetical protein FTCG_01551 [Francisella novicida GA99-3549]
          Length = 246

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 57/215 (26%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F     + ++  T+++              +  G       F+     +  + G 
Sbjct: 1   MKKFIFAFTATMAVMISTAYAD-------------ITVGTTGDYAPFSIYNPKDNKYSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A + +      +++++  +       L++ + D+       T  R+     +  
Sbjct: 48  DIKLIEAFARS---KKERVKFVKTSWATAENDLKNNKFDVFVGGMTITPERQKEFVFSTP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I +         K     + S +      V              K  N K   I     
Sbjct: 105 LILFNKAAMTACKKLNKYKTFSDIDNPKTLVIENRGGTNQTFAMQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
           ++   +          D    D   +      N +
Sbjct: 163 DQAINSIINGIDNIHPDIMFTDTLEIAYQHSKNHK 197


>gi|330822038|ref|YP_004350900.1| Extracellular solute-binding protein, family 3 [Burkholderia
           gladioli BSR3]
 gi|327374033|gb|AEA65388.1| Extracellular solute-binding protein, family 3 [Burkholderia
           gladioli BSR3]
          Length = 301

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 70/226 (30%), Gaps = 14/226 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           ++  ++L  +     L+  ++    G        G+ +G DVD   A +  +    ++I 
Sbjct: 58  ASAGAVLDRVHATRTLRVCLSQNDAGITYRDPRTGEPRGIDVDLAAAFAGDLG---AQIV 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGIS 138
            +  +       L + + D+       T  R     L F          G      + + 
Sbjct: 115 MVDTSFDRFADDLLADRCDVAMLAVAATAARREM--LRFSRPYLSSGIVGVASRGSEVVP 172

Query: 139 SVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
               L   G  + VQ G+  E  L    K   +        R +E     +A R D    
Sbjct: 173 GWGDLDRPGVRVGVQQGSQIEPLLRATLKRATLVVLDARVNREDE----LQAGRLDVLVA 228

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +       L N   +  V  P      P A A+  GD  W   V 
Sbjct: 229 GLP-YARRLLENADWARLVAPPRPFHPMPYAYAVRPGDDAWLQTVD 273


>gi|261821752|ref|YP_003259858.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261605765|gb|ACX88251.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 311

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 73/226 (32%), Gaps = 19/226 (8%)

Query: 34  GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   ++       + +   N    G D D  R ++ ++     +++ +P + ++  L 
Sbjct: 66  GTLTVTVSALSSPPLSLLADDNKTIVGSDADIARLVADSLG---LELKLVPASWEDWPLG 122

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASI 148
           + + + D    N   T  R+      F      D  GF +    K   I+    ++G  +
Sbjct: 123 ITAGKYDAAIFNIAVTKPRKE--KFDFA-TYRIDTLGFYVKSTSKITAINKPEDVAGLKV 179

Query: 149 CVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L D+ + +         P+        + + ++ R DA+ G  S     
Sbjct: 180 IVGSGTNQENILLDWDRQNRANGLPPVQPVYVTDDAAANLSIQSGRVDAFFGPHSTGAYK 239

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                +       P +           Q        +S      + 
Sbjct: 240 AALTGKTRMVGKGPTVA----YVAVTTQKGNGLAQAISTAINGAIH 281


>gi|317482795|ref|ZP_07941805.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915757|gb|EFV37169.1| bacterial extracellular solute-binding protein, family 3
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 281

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 86/265 (32%), Gaps = 15/265 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            ++ L+           + +    +   +  G+            +G ++GFD+   + +
Sbjct: 9   GVILLLSGLAGCGQIQVTTVSGAPEGPTIAIGVAADEPSVGAW-HDGTYQGFDITIAKYV 67

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +     +I +  +  + R   L + Q+D++  +   T   E S  + F         
Sbjct: 68  AAKLGYANKQIVFKQVRPENRRSMLDNGQVDMVVASWPITD--ESSAIVDFAGPYLTTSV 125

Query: 128 GFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           G ++             SV  +   ++C   G  T       F+ ++ +          +
Sbjct: 126 GLLVRSDERGRFTNDAGSVGDVGDGTVCAVKGDETVGI----FRGNHPQARIQERSSYAQ 181

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A +    DA   D++ L  L        +++ +     +     A+ QG ++    +
Sbjct: 182 CVTAVQVGSADAIASDMAVLSGL--QAANGPQYMDVIADKGEVGYGIAVSQGTSQLAQKI 239

Query: 242 SWTHYAMVTAEELGITQKNINQVSK 266
           +     MV        +      +K
Sbjct: 240 AEALEDMVEDGSWTAAKDTFTSQTK 264


>gi|163740023|ref|ZP_02147427.1| extracellular solute-binding protein, family 3 [Phaeobacter
           gallaeciensis BS107]
 gi|161386654|gb|EDQ11019.1| extracellular solute-binding protein, family 3 [Phaeobacter
           gallaeciensis BS107]
          Length = 160

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 13/162 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  +      L     +  +           L+ G++ G   F  V+ +   +GF+
Sbjct: 1   MMKPFAWAAAVAASLTAAPSAFASDT---------LRVGMSGGYFPFTFVRQD-VLQGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD   A++        +++++ ++      AL+S +ID ++     T  R          
Sbjct: 51  VDVMNAVAEETG---LEVEFVTMSFSGLIGALESDRIDTIANQITITPERSAKFAFTQAY 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
           +            +  I+  + L+G ++ V  G+  E  L +
Sbjct: 108 VIDGAQVVVKRGNEDSIAGPADLAGKTVAVNLGSNFEQLLRE 149


>gi|86609616|ref|YP_478378.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino
           acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558158|gb|ABD03115.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino
           acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 285

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 77/240 (32%), Gaps = 25/240 (10%)

Query: 25  SILGDIKKRGFLKCGINTGL-VGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           S   +I+ RG ++ G++  L   +         + GF+ D   AL+  +     ++  + 
Sbjct: 31  SRWAEIQARGRIRVGLDPSLGPAYLYTDLERQTYAGFEWDILEALAQTL---QVQVDPIY 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHKKKG-- 136
           +   E+  ALQ+ ++D++         RE               Y   Q  ++       
Sbjct: 88  VAWSEQLAALQADEVDLIWGA------REALGLDPEQFLATRPYYLSPQRLVVRDPFPTS 141

Query: 137 ------ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                 I ++SQL G  + +   +T    L  Y +              E + A  +A +
Sbjct: 142 GPEEPAIEALSQLFGRKVGIVVNSTGAALLEAYNERRGNAIRLFATSNPERLFAQLQAGQ 201

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            DA   D              S   ++   +   PL   +          V     +++ 
Sbjct: 202 LDAVLVDQPVAALNLRQAG--SRLRLVGPPLFPMPLVGVVSSQHPSLKEAVDGAISSLIE 259


>gi|227485353|ref|ZP_03915669.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
 gi|227236644|gb|EEI86659.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
          Length = 524

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 73/226 (32%), Gaps = 34/226 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M +   V++L  IIL F   +T AS          L+ G+      +             
Sbjct: 1   MKR--LVNLLLAIILLFPIGNTYAS-------EDVLRVGMEVNYAPYNFSETNDSNGGVP 51

Query: 50  -VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
              + G++  G+DV F + ++  +      ++   +       AL S +ID +      T
Sbjct: 52  VANSPGEFANGYDVRFAKNIADKLGKK---LEIYKIEWDGLIPALTSGKIDAILAGMSPT 108

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYF 164
             R     + F    Y      ++ K        S++   GA I  Q GT     +    
Sbjct: 109 DER--REQIDFSLPYYRAKMVVVVPKNSKYINAKSINDFKGAKITGQLGTFHADVVDQME 166

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                +      +    + AA  A   D Y  + +   +   +N  
Sbjct: 167 DVDKQE----PMDSFPTMIAATNAGTLDGYVSEEAGAESAISSNPN 208


>gi|306844935|ref|ZP_07477517.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
 gi|306274764|gb|EFM56548.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO1]
          Length = 280

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 77/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             +   G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 61  NRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--WE 117

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K     +        + V AGT  E  L +YF 
Sbjct: 118 PTDRNREKFTFTRSYMRLPARFATTNAKSFTEPAAKATQDKPVGVIAGTAHEELLKNYFP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + + AA +  + D    D  +L A   + +       ++   L   
Sbjct: 178 QAK----PVPYPNRDAMLAALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ + +    +  +    A+  
Sbjct: 234 YLGSGLSIAVTRQNAALASAFNNALQALQQ 263


>gi|315640931|ref|ZP_07896027.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
 gi|315483349|gb|EFU73849.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Enterococcus italicus DSM 15952]
          Length = 273

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 11/257 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDW 56
           M K   VS L ++ L     +  +S              +        + +A +  NGD+
Sbjct: 1   MKKSTLVSGLSVMALSLLLAACGSSSSASSSSDDSSVTKVTVATGNDALPYAYLDENGDY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-EISLG 115
            G+DV   +A+   +        +   +       L+S +  + +   +    R E  + 
Sbjct: 61  DGYDVAVVKAIDEKL--KDYSFTFEGSDFPTTLSNLESNKAQMAAYEYEVNDERKEKFVY 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                + +     +   K +  ++   L G  + V   T       +Y K +   +  + 
Sbjct: 119 GDVGYVVWDTYIAYDPDKGETYNTFDDLKGKKVYVTTSTNQAAMAENYLKDNPDAFTLVY 178

Query: 176 -FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQG 233
                E+I  A  +   DA       +     T D   +  I  +   +         + 
Sbjct: 179 GEYSNEQIVQALTSGAVDATLAPKYQIDNYNKTFD--VDLKIGDEPVHNSDAYLLFNKKT 236

Query: 234 DTEWYNIVSWTHYAMVT 250
           DT+  + V+     +  
Sbjct: 237 DTKLIDAVNTALKELKE 253


>gi|85376482|gb|ABC70479.1| cyclohexadienyl dehydratase precursor [Pseudomonas sp. M18]
          Length = 137

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I + G L+         F+     G + GFDVD  + L+ ++      +     +
Sbjct: 28  SRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVP---TS 84

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
                      + DI        L R+      F    
Sbjct: 85  WPNLMRDFADDRFDIAMSGISINLERQR--QAYFSIPY 120


>gi|222102870|ref|YP_002539909.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739471|gb|ACM40204.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 329

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 79/238 (33%), Gaps = 13/238 (5%)

Query: 24  ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A  L   I+ +  +K   +      +    +G   G D D   AL   +  D   +Q   
Sbjct: 72  ADRLPSAIRDKKAIKVATDLT-PPISFQAEDGKLIGIDADIAAALGVILGID---VQMTN 127

Query: 83  L-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139
           +        A+ SK+ D+     +  +  E  +         FD    +  K     I S
Sbjct: 128 VGAGAAIVPAVVSKRFDMTISGINDDVELEKQVD---VIDYMFDATTIMTIKGNPLGIKS 184

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDI 198
           +  L G  +    GT     +       +   + I   ++ ++  A R  R DA   G  
Sbjct: 185 MEDLCGKKVAAPVGTFQARLVEAASAKCSKPINIISIPKMPDVLQAVRTGRADATVNGFA 244

Query: 199 SALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +++Y  K    +      LPD+      L     + + E  ++V  +   MV +    
Sbjct: 245 TSVYTTKNQTGKGVGLQALPDVRLAVGYLGMLTSKDNPELRDVVIASLQHMVDSGAYK 302


>gi|260655738|ref|ZP_05861207.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Jonquetella anthropi E3_33 E1]
 gi|260629354|gb|EEX47548.1| cystine ABC transporter, cystine-binding periplasmic protein
           [Jonquetella anthropi E3_33 E1]
          Length = 258

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 9/202 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +  +  G +     +A  K +   +GF++D  R ++     +  +++            
Sbjct: 25  DKQKVIVGTSASYKPWAFQKDD-KAQGFEIDVWREIAKR---NNYELEIKLGQFSGLVGM 80

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + +ID ++     T  R      AF     +    F +     + +   L G  +   
Sbjct: 81  LDAGEIDTVAHQMSITPAR--LEKYAFSTPYAYSYYDFFVKNDSPLKTKEDLKGHKVGCW 138

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G   E TL      +N+    + ++ +   + A    R DA+         +    + P
Sbjct: 139 LGGNGEATLRAINDKYNLGLDIVTYDGIAMENEAVI-GRIDAFWQGEIKTKTVIAEQNLP 197

Query: 212 SEHVILPDIISKSPLAPAIIQG 233
            +   L + +     A    + 
Sbjct: 198 LQ--QLNEKLVYETNAYPFRKD 217


>gi|86360054|ref|YP_471943.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli CFN 42]
 gi|86284156|gb|ABC93216.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 336

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     ++ G    A          G D D+  A++  +      ++ +P+   +  L L
Sbjct: 87  GKFTIAVSPGGPPLATYATDAKTVVGADPDYAYAIADNLG---LTLEIVPVAWIDWPLGL 143

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+S       +G  I 
Sbjct: 144 TSGKYDAVISNVGVTEQRKE--KFDFS-TYRRGLHGFFVKSDNPITSIKEPKDAAGLRII 200

Query: 150 VQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L     +   A         ++       A R+ R D      + L  + 
Sbjct: 201 VGAGTNQERILIKWSEEDVAAGLKPIELQYYDDEAASLLALRSGRADVIVQPHAQLVFIA 260

Query: 206 LTNDR 210
             +  
Sbjct: 261 ARDKN 265


>gi|269962690|ref|ZP_06177035.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
 gi|269832613|gb|EEZ86727.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
          Length = 248

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 17/232 (7%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIQGVEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D  +   L   
Sbjct: 132 VAVNLGSNFEQLLRSYDK--DGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIKK 187

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              P +    P    ++       +   +    V+         EE+     
Sbjct: 188 TGLPLQLAGEPFETIQNAWPFVDNEKGRKLQAEVNKAL------EEMRADGT 233


>gi|307941623|ref|ZP_07656978.1| extracellular solute-binding protein family 3 [Roseibium sp.
           TrichSKD4]
 gi|307775231|gb|EFO34437.1| extracellular solute-binding protein family 3 [Roseibium sp.
           TrichSKD4]
          Length = 268

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 68/237 (28%), Gaps = 14/237 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDF 63
           F  +    I +      + A+ L D++ R  +             +    G+  G++ D 
Sbjct: 7   FLQAASFAIGVIALGAKSQAAELPDLEGREVVVV-TENAYPPLQFIDPKSGNAIGWEYDA 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              ++  +      + Y  ++      A+   Q ++    T  T+  +    + F     
Sbjct: 66  MAEIAKRL---NMTVAYENVSWDAMIPAVSEGQYEVGM--TGITIRDDRKEKVDFSDAYM 120

Query: 124 FDGQGFI----MHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFER 178
                 +      +     S +      +  Q GTT   + + +    +       +FE 
Sbjct: 121 RSEMFMLVGAKEDRFTDAKSFAANDDLLVGAQPGTTPFYVAVYEVLDGNEANSRIKLFET 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                 A RA   D    D +A          P    ++ D +          +G  
Sbjct: 181 FGASVQALRAGDVDLVLTDGTAGQGYVT--ANPDTFKLIGDPLGSEDFGFIFPKGSD 235


>gi|91778281|ref|YP_553489.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia xenovorans LB400]
 gi|91690941|gb|ABE34139.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 288

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 71/273 (26%), Gaps = 39/273 (14%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    +++    +F              K    +   +  G   +      G   GF+ +
Sbjct: 12  KALIGAVIGAAAIFAAPVQA--------KDWKTVTIALEGGYAPWNLTLPGGKLGGFEPE 63

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L   I     +   +  +       LQ+ + D+L      T  RE  +  +     
Sbjct: 64  LVANLCERI---KLQCNLVAQDWDGMIPGLQAGKFDVLMDAISITPEREKIIAFSKPYAA 120

Query: 123 YFDGQGFIMHKKKGISSV----------------------SQLSGASICVQAGTTTELTL 160
                     K    ++                        QL G +I +Q+GT     +
Sbjct: 121 TPATFAVADAKILPKAAPGAGVVKLTGDPKTDQPTVDALRKQLKGKTIGIQSGTVYTKFI 180

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHVIL 217
            D FK         V++   E D      R DA   D++   A     +          +
Sbjct: 181 NDGFK---DIATIRVYKTSPERDLDLANGRIDASFDDVTYYAANIDKKETASIVMAGPKI 237

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              I       A  + D +          A + 
Sbjct: 238 GGPIWGPGEGLAFRKQDADLKAKFDTAINAALA 270


>gi|193084269|gb|ACF09931.1| periplasmic substrate binding protein [uncultured marine group III
           euryarchaeote KM3-28-E8]
          Length = 270

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-----KKKGIS 138
           ++++RF  L S +ID+L R T WT  R+  L   F  + ++DGQG ++           +
Sbjct: 4   SSQDRFEKLASGEIDVLIRTTTWTTSRDAELNADFAGMNFYDGQGILIREDAFPAANANN 63

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           SVS L GA+ICV  GTTTE  L DYF +H + +         E    +    CDA+TGD+
Sbjct: 64  SVSGLDGATICVGTGTTTEGNLQDYFTSHGIAFTAEPVGDAAEATQKFIDGACDAFTGDM 123

Query: 199 SALYALKLTNDRPSEHVILPD 219
           SA+    L+      H  + +
Sbjct: 124 SAMVVDDLSVQHRYGHQPVTE 144


>gi|163857137|ref|YP_001631435.1| putative extracellular solute-binding protein [Bordetella petrii
           DSM 12804]
 gi|163260865|emb|CAP43167.1| putative extracellular solute-binding protein [Bordetella petrii]
          Length = 309

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 78/250 (31%), Gaps = 15/250 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74
             ++     S L   K  G ++ G       +A +  +     G  V+  R +   +  +
Sbjct: 37  AASNPPAAQSTLAAAKAAGKVRIGY-ANEAPYAYMDSSKNQITGEAVEIARIVLKRMGIN 95

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              ++ +          LQ+K+ DI++     T  R     +AF   TY  G+ F++ K 
Sbjct: 96  E--VEGVLTEFGSLIPGLQAKRFDIIAAGMYVTPER--CQQVAFSNPTYGVGEAFLVQKG 151

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               + S   ++             +      K        +VF  V    +  +A R D
Sbjct: 152 NPKDLHSYEDIAKKDDARLGVVVGAIEGEYASKMDIPVDRVVVFPDVVSALSGIQAGRAD 211

Query: 193 AYTGDISA-------LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           AY               A  L    P    ++     +   A A    D ++ +  +   
Sbjct: 212 AYAATAMTVNDLMKKTAAGDLEKAEPFTDPVIDGKSVRGYGAFAFRTDDQDFVDAFNAEL 271

Query: 246 YAMVTAEELG 255
              +  EE  
Sbjct: 272 AKFIGTEEHA 281


>gi|260465478|ref|ZP_05812668.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259029782|gb|EEW31068.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 192

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 3/155 (1%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             + ++C+     +  +        +     +  G       +A  +A+G + GFD++  
Sbjct: 19  MALMVVCIGAGLVSRAAAADDNPYGLIDAKVISVGTMGDAKPYAFTQADGTFTGFDLELF 78

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R ++  +   P ++ +          ++ + + D+       T  R+ +  + F      
Sbjct: 79  RNVAGRLGFKPDQVIFTGQEFSALMPSVANGRFDVAVAAIGTTDARKKT--VDFSDGYLA 136

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
                +    K + S   L G  + V  GT  E T
Sbjct: 137 GYLSVLT-ADKAMKSADGLKGKRLGVVQGTLQEST 170


>gi|300933296|ref|ZP_07148552.1| putative secreted protein [Corynebacterium resistens DSM 45100]
          Length = 316

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 75/264 (28%), Gaps = 38/264 (14%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGD-------------------------IKKRG 34
           M+K    V+   L  L  T+     +   +                         I  RG
Sbjct: 1   MFKSKLRVTAHALFALMLTTTVGACATNEETGHPEGWKNIQPAKDPELAQLVPKNIAARG 60

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +    NT         + G+  G ++D  +A  S +  D   +Q   ++      A+ +
Sbjct: 61  TVTAATNTPYAPNEFKDSEGNIIGVEMDLVKAAGSVLGLD---VQPRQMDFSLILPAISA 117

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             I++ +     T  R+      F                +G    +   G ++ VQ GT
Sbjct: 118 GSIEMGASALTDTEERQK--NYDFVDFLNAGVAWATQPGNEGNVDPNNACGMTVAVQKGT 175

Query: 155 TTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            ++         D       K   +V+   +    A    R  AY+ D   +        
Sbjct: 176 YSDTDEVQGKSEDCEAKGKPKITKLVYATADAAATATILGRAQAYSSDSPVI--SYAVKR 233

Query: 210 RPSEHVILPDIISKSPLAPAIIQG 233
                  + +    +P   A  + 
Sbjct: 234 SNGRLSQVGNAFDTAPFGWAFKKD 257


>gi|222085818|ref|YP_002544348.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723266|gb|ACM26422.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 309

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 73/232 (31%), Gaps = 12/232 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKE 87
            I+  G LK   +      +    +G   G D D   AL   +  +   +Q   +     
Sbjct: 58  AIRTSGILKVATDLT-PPISFHADDGKLVGIDADIAAALGIILGVN---VQMTDVGAGAA 113

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSG 145
              ++ SK+ DI           E+   +       +D    +  K     I S++ L G
Sbjct: 114 IVPSILSKRFDISISG--INDDPELEKQVDVID-YMYDATTIMTIKGNPLGIKSMADLCG 170

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204
             + V  GT     +           + +   ++ ++  A R  R DA      +++Y  
Sbjct: 171 KKVAVPVGTFQAKLVETASAKCQAPINIMAIPKMPDVLQAVRTGRADATVNGYATSVYTT 230

Query: 205 KLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +           LPDI      L     + + +  + V      MV +    
Sbjct: 231 ENQTGNGKGLEALPDIRLAVGYLGMLTAKDNPQLRDSVVAALQQMVDSGAYE 282


>gi|218677477|ref|ZP_03525374.1| extracellular solute-binding protein family 3 [Rhizobium etli CIAT
           894]
          Length = 53

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 2/50 (4%)

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339
           + D+  + I+ +GNYGE +DRNLG ++++ + R    NALW++GG +Y+P
Sbjct: 1   SDDFIAQAIKAVGNYGEAYDRNLGPKTKMYLDRKGTPNALWTQGGAIYSP 50


>gi|121607783|ref|YP_995590.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121552423|gb|ABM56572.1| cyclohexadienyl dehydratase [Verminephrobacter eiseniae EF01-2]
          Length = 294

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 68/235 (28%), Gaps = 36/235 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFS----------------------TNASILGDIKKRGFLKC 38
           M +    +   LI     S +                         S L  ++KRG L+ 
Sbjct: 1   MKRRHAFASTALIGAATLSGALTAPGAQAARAAPAAPAKVALPRTDSTLDRVQKRGVLRA 60

Query: 39  GINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            +  G   +       G W G  ++    +++ +     +++ L      + L LQS ++
Sbjct: 61  AVILGQAPYFTKDLMTGQWGGACIEMANDIAAKLG---VRVELLESTWGHQILDLQSDKV 117

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGA--SICVQAGT 154
           D+           E +L + F           +  K  +   +   L+     I V  G+
Sbjct: 118 DLAFA---VNPTPERALVIDFATPILVHSFTVVTRKGFRKPQTWEDLNRPEVRIAVDLGS 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           T E     Y            F+  +E   A    R D           +   N 
Sbjct: 175 THESIARRYAPKAG----ISAFKNRDEAVLAVATGRADVNVVLAVLALPMLKKNP 225


>gi|296271506|ref|YP_003654138.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
 gi|296094293|gb|ADG90245.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
          Length = 290

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 73/249 (29%), Gaps = 13/249 (5%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
             +  T+    A     +K  G L  G +      + +     + +GF+     A++  +
Sbjct: 32  GTVSATASLNCAKEALPVKNPGKLTIGTDKPAYEPWFKKDDPTNGEGFESAVAYAVAERL 91

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI- 130
                ++ +  +     F A   KQ D        T  R+    + F    Y   Q  + 
Sbjct: 92  GFTKDEVTWTVVPFDSSF-APGPKQFDFDINQISITEERKK--AVDFSQGYYTVKQAVVA 148

Query: 131 --MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
               K    +S++ L  A   VQAGTT    +    + +     P VF +  +   A + 
Sbjct: 149 LEGSKFAAATSLADLKDAKFGVQAGTTALQAVQQVIQPN---TEPSVFNQQIDAINALKN 205

Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + D    D+                         +         +G       V     
Sbjct: 206 KQIDVIVVDLPTAFYVTAAQVEGSKIVGQFASSSDAPEEFGLLFEKGSP-LVPCVDQALS 264

Query: 247 AMVTAEELG 255
            +  + EL 
Sbjct: 265 ELKASGELA 273


>gi|237736049|ref|ZP_04566530.1| amino acid ABC transporter [Fusobacterium mortiferum ATCC 9817]
 gi|229421863|gb|EEO36910.1| amino acid ABC transporter [Fusobacterium mortiferum ATCC 9817]
          Length = 276

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 73/242 (30%), Gaps = 24/242 (9%)

Query: 31  KKRGFLKCGINTGLVGFAE---VKANGDWK---------GFDVDFCRALSSAIFDDPSKI 78
           K+    K G+  G   +       ANG  K         G+D++  + ++  +  +   +
Sbjct: 31  KETNTFKIGMEAGYAPYNWTQLTDANGGVKISGSSEYAGGYDIEIAKRIADGLGKELVVV 90

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +           AL S ++D +      T  R+ +  + F    Y      ++       
Sbjct: 91  K---TEWDGLVPALVSGKVDAIIAGMSPTAERKET--IDFTDTYYQSNLVMLVKNGGDYV 145

Query: 139 SVSQLSGASIC--VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +   L+  S         T   T+ D     N +      +    +  A  +   D Y  
Sbjct: 146 NAKTLADFSGAKITGQLNTFHYTVIDQIPNVNKQP---AMDNFPAMRVALESGVIDGYVT 202

Query: 197 DISALYALKLTNDRPSEHVILPD-IISKSPLAPAII-QGDTEWYNIVSWTHYAMVTAEEL 254
           +     + +  N            + S    A A+    ++   + V+     +   E L
Sbjct: 203 ERPEAISAQSANSNFKMVEFTDGFVTSPEDTAIAVGLAKNSPLKDKVNEILRGISQEERL 262

Query: 255 GI 256
            I
Sbjct: 263 EI 264


>gi|84394506|ref|ZP_00993216.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio splendidus 12B01]
 gi|84374859|gb|EAP91796.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio splendidus 12B01]
          Length = 195

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 11/171 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  K++Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-QLQGFEVDLWDEIGKR---NDYKVEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFADPYVVDGAQITVRKGNDSIKGIEDLDGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D 
Sbjct: 132 VAVNLGSNFEQLLRSYDK--DGKINVKTYDTGIE--HDVALGRADAFVMDR 178


>gi|227823546|ref|YP_002827519.1| ABC transporter substrate-binding protein [Sinorhizobium fredii
           NGR234]
 gi|227342548|gb|ACP26766.1| ABC transporter substrate-binding protein [Sinorhizobium fredii
           NGR234]
          Length = 277

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 81/281 (28%), Gaps = 27/281 (9%)

Query: 4   DFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60
               ++  +  L  T+ S          ++K G L+CG       +      +G++ GF 
Sbjct: 11  RALPALALITGLSTTAASAQNAEGYWQGVQKAGVLRCGAAVA-PPYVMRDPASGEYSGFF 69

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CR  +  +   P    ++          LQ+ + D+   +         ++ + F  
Sbjct: 70  ADLCREFADVLKVKPE---FVDTTWDNIVAGLQAGKWDL---SLALNRTPARAMAVQFSV 123

Query: 121 ITYFDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                      +K+                   ++ V +GT  +  +    K        
Sbjct: 124 PAMEYQISLAYNKENPKIPAGATSVADIDNKDVTLAVMSGTAQDKAITAAVK----NATI 179

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +     +E   A  + R D              T   P   V L    + +    A    
Sbjct: 180 LRLPGNDETRLAVVSRRADILVDASDTN--QLFTQSNPDWAVALNPTPALAKQGVAFGLP 237

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
                + V       +  EE  +   ++ ++ K   +  ++
Sbjct: 238 HQLSASDVEVV---NIFLEE-KVATGHVEELIKKAVDEVLK 274


>gi|297587192|ref|ZP_06945837.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Finegoldia magna ATCC 53516]
 gi|297575173|gb|EFH93892.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Finegoldia magna ATCC 53516]
          Length = 526

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 68/228 (29%), Gaps = 34/228 (14%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M    +     ++ L+++F               ++     G+      F          
Sbjct: 1   MKNFTRKLISVVMILMMMFVFI-----DT-ESFAEKDTFVIGMEANYAPFNWSQSTDANG 54

Query: 50  ----VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                 + G++  G+D+   + ++ ++      ++   +       A+ S ++D +    
Sbjct: 55  AYPIENSKGEYANGYDLQIAKKIADSLGKKLVVVK---MEWDGLAPAVMSGKVDAIIAGM 111

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLA 161
             T  R+    + F    Y      +  K        S++ L G  I  Q  T     + 
Sbjct: 112 SPTKERKE--QIDFSDTYYSSDLVIVTKKDSKYINAKSLNDLKGFKITGQLNTFHYSVID 169

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                  +       E    + +A  A + D Y  +     + + +N 
Sbjct: 170 QIKDCDKLP----AMESFPSMLSAVLAEKIDGYVSEKPQALSAEASNA 213


>gi|330505281|ref|YP_004382150.1| diguanylate cyclase/phosphodiesterase [Pseudomonas mendocina NK-01]
 gi|328919567|gb|AEB60398.1| diguanylate cyclase/phosphodiesterase [Pseudomonas mendocina NK-01]
          Length = 1244

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 79/260 (30%), Gaps = 23/260 (8%)

Query: 9   ILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            + L+ L +      A  L +     +     L  G++     F      G + G   D+
Sbjct: 6   AILLLCLAYWVTPALALTLNENERTWLAAHPELSLGVDAAWPPFEFRDDQGQYHGLTADY 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQS---KQIDILSRNTDWTLLREISLGLAFRP 120
            R +   +      + + P+        L+     Q+D+L          E    L+F  
Sbjct: 66  VRLIEERLG-----VTFRPVEQGSWSAILEQARMGQVDLLPGVMA---TAERQEYLSFTR 117

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    +          ++ L G  + V         L    + H+   + +    V
Sbjct: 118 PYLDFPIIILARNGGSQPKQLTDLYGLKVAVVTDYAPHELL----RQHHPDLNLLALPSV 173

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A   ++ D   GD+++             ++          LA A+ +G +   +
Sbjct: 174 AAALQALATNQADVMVGDLASSVWSLRQLKLDGIYISGETPYRYQ-LAMAVPRGQSMLVS 232

Query: 240 IVSWTHYAMVTAEELGITQK 259
           I+    +A +  EE+   Q 
Sbjct: 233 ILDK-LFAELGTEEIAALQA 251


>gi|295111598|emb|CBL28348.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Synergistetes bacterium
           SGP1]
          Length = 274

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 65/196 (33%), Gaps = 16/196 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
           M + + +  IL  + +   S    AS      +   ++         F     A  +W G
Sbjct: 1   MKRFWGWGLILAWVFIACISREGIAS------EDKVIRVATPGTYAPFTMYDEATQEWSG 54

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  R +      +   +Q++ L+    F  L   ++D +++    T +R       F
Sbjct: 55  FEIDMWRTIGEKAGYE---VQWVRLDNPATFAELDLGRVDTVAKQISITPVR--QQKYDF 109

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +F      +      I S   + G +I +  G+     +A     + +K     + 
Sbjct: 110 TRPFFFSPYCLTVAADNEAIKSWKDMEGKTIGLSEGSAMNEFIAAMDPENKVKKSV--YG 167

Query: 178 RVEEIDAAYRAHRCDA 193
               I         DA
Sbjct: 168 SGSSILHEVAMGHVDA 183


>gi|209883817|ref|YP_002287674.1| extracellular solute-binding protein, family 3 [Oligotropha
           carboxidovorans OM5]
 gi|209872013|gb|ACI91809.1| extracellular solute-binding protein, family 3 [Oligotropha
           carboxidovorans OM5]
          Length = 272

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 65/214 (30%), Gaps = 16/214 (7%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
             T    F     +G+  GF+VDF RAL   I              +    A+ + + D 
Sbjct: 47  TETDYPPFDFTGPDGNPAGFNVDFARALCEEI---KVPCTIQMRRFETLIDAINTNRGDA 103

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTE 157
           +          +I   L F    Y     F+    + +       L+G  I V AG+  E
Sbjct: 104 VIA--SIAASPDIRARLDFTDPYYRAPARFVARAGEAMAEVRPENLTGKKIGVIAGSAHE 161

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE---- 213
             L  +F         + F   + +  A R    D   GD  +L       D        
Sbjct: 162 AYLKAFF----TDALAVGFPSEDAMRTALRRSEVDLIFGDAISLGFWINGTDSGECCTFA 217

Query: 214 -HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               +        +   + +G+      ++W  +
Sbjct: 218 GGPFVESRYFGEGIGIGVRKGNDLLRQALNWAMF 251


>gi|153852846|ref|ZP_01994283.1| hypothetical protein DORLON_00265 [Dorea longicatena DSM 13814]
 gi|149754488|gb|EDM64419.1| hypothetical protein DORLON_00265 [Dorea longicatena DSM 13814]
          Length = 291

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 16/234 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK---------KRGFLKCGINTGLVGFAEVK 51
           M K+  VSI  + +      +  A   G  K         K   +K G    +  +  V 
Sbjct: 1   MKKNKLVSIAAITVALGVLATGCAGGSGSSKSDSKSSGGTKTVTVKAGTGANVKPYTYVG 60

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            + +  G+DV+  + +   +  D   +Q    +    F  + S    I   N  +   R 
Sbjct: 61  DDNETTGYDVEVLKEIFDRL--DGYDLQIEVTDIPSVFSGVTSGTYQIGVNNFSYNEERA 118

Query: 112 ISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                 +       G  FI  K    + + +  +G S   Q+G +    +  + + +  K
Sbjct: 119 K--SYLYSYPYDKIGYVFITKKGAPEVKTFADAAGKSFEGQSGVSVTTAIESWNEKNPDK 176

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
              I +   +        H  D  T       A+     +   + ++ + IS  
Sbjct: 177 KIDITYTDADTAIT--LQHIEDGTTDLAIIDVAMYNAYQKEYNYDVVANQISDE 228


>gi|121607716|ref|YP_995523.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121552356|gb|ABM56505.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 276

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 80/260 (30%), Gaps = 22/260 (8%)

Query: 6   FVSILCLIILFFTSFSTNA---SILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             S+  L IL   + +  A    +      K+G L   +N  L     V   G  KG  V
Sbjct: 7   VASVAALFILGMGAANAQACKSPVPDAALVKKGTLIMSVNPTLPPMQFVDQTGALKGMRV 66

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +   A++  +   P    Y+ +        LQ+ + DI++    +T  R   + +     
Sbjct: 67  ELGEAIAKRLCLTPE---YVRIEFSAMIPGLQAGRWDIINTGIFYTDERAKLMQML---P 120

Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----YHPIV 175
                      +     I+    LSG SI V+ G   E    +  K    K         
Sbjct: 121 YEDQAISISTARGNPLKINKPEDLSGKSIGVEIGGFEERKARELDKQLTDKGLKGMTIRT 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE       + RA + +      S     +       +   +   +  +P+A A      
Sbjct: 181 FENFAMAFQSLRAGQVEVALSIDSTGAEYQKR----GDFDRVLHGLFPTPVALAAKNK-- 234

Query: 236 EWYNIVSWTHYAMVTAEELG 255
           E    V+     M     L 
Sbjct: 235 ELSIAVAKVLNDMKADGSLN 254


>gi|153954686|ref|YP_001395451.1| hypothetical protein CKL_2068 [Clostridium kluyveri DSM 555]
 gi|219855155|ref|YP_002472277.1| hypothetical protein CKR_1812 [Clostridium kluyveri NBRC 12016]
 gi|146347544|gb|EDK34080.1| Hypothetical protein CKL_2068 [Clostridium kluyveri DSM 555]
 gi|219568879|dbj|BAH06863.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 288

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 80/258 (31%), Gaps = 21/258 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKA 52
           M K F   +  + +  +F +     ++   +   +        ++  I TG+  +  V  
Sbjct: 1   MKKIFNVLIGAIMISTIFLSGCG-KSNTADNTSAKPTAENPKTVEIAILTGMAPYTYVDD 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG ++G+D +F   +   +     K  Y  +       A+++    +       T  R+ 
Sbjct: 60  NGKFQGYDYEFLTMVDDML--PEYKFHYNSVEPDAGAAAVKAGTYALSCSAHFITPARQE 117

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--- 169
           +  L++    Y      I  K    +    L+G ++           +            
Sbjct: 118 NFILSYPQSYYPVN--LISRKADSFTKFEDLNGKTLVPNPPNDGLYVVLHDLAKKYPDVK 175

Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             +     +    +        + D + G  +  Y +      P +     + I  +P  
Sbjct: 176 FTQEEVSNYIPYADGCRGVANGQWDCWFGGDTMFYDI--MEKEPMDL-FCSEPIYCAPCV 232

Query: 228 PAIIQGDTEWYNIVSWTH 245
             + +  T+  + ++   
Sbjct: 233 VVLNKNYTDLRDQINKCI 250


>gi|27377335|ref|NP_768864.1| ABC transporter amino acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27350479|dbj|BAC47489.1| ABC transporter amino acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 254

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 71/215 (33%), Gaps = 13/215 (6%)

Query: 35  FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            LK G     + F  +       +G  VD    +          +Q  P++      +L 
Sbjct: 27  VLKVGSTPTGIPFTFLDTKTNTIQGIMVDLITEIGKDAG---LNVQIEPMSFSALIPSLT 83

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQ 151
           S +IDI++     T  R+    + F    Y  G+G ++ K      ++   L G ++  Q
Sbjct: 84  SSKIDIIAAAMFITAPRKEV--VDFSDPIYTYGEGLVVPKNDTKAYATQDDLKGETVGAQ 141

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT       D  K   +      ++ + +I       R  A   D   L         P
Sbjct: 142 VGT----AFVDALKKSGLFADVKAYDTIPDILRDVNTGRLKAGYADYPILAYNLKQGGFP 197

Query: 212 S-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               V     ++   +   + +GD+     ++ + 
Sbjct: 198 EVRLVDSYKPVTVGSVGIGVRKGDSALLGKINASL 232


>gi|169350594|ref|ZP_02867532.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552]
 gi|169292914|gb|EDS75047.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552]
          Length = 523

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 87/290 (30%), Gaps = 38/290 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKAN--- 53
           M K   +  +  ++L   S       +  IK +         G+      F   + N   
Sbjct: 1   MNKLLKIITVLTVLLSIISP------INTIKAQEEDDNTFVVGMECNYTPFNWTQVNETE 54

Query: 54  --------GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                   G   G+DV   RA++  +  +   +    ++      ALQ+  ID +     
Sbjct: 55  TTVALEGGGYADGYDVTIARAIAKYLGKE---LVIKKMSWDGLEPALQAGVIDAVIAGMT 111

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLAD 162
            T   +    + F    Y      I+ K   +    S+   S   +  Q  T  +  +  
Sbjct: 112 DTA--DRRQRVDFTQPYYESQMVMIVRKDDKLADAKSLKDFSNKKVLGQLNTLYDTVIDQ 169

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVIL 217
                    H    E    +         D  T ++     +  TN   +     +    
Sbjct: 170 IPD----VIHATALEDYPAMVMQLNNELVDGVTAELPVAAGIVATNPDLTYVEFADGKGF 225

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
              ++ + ++ A+ + + E  N +      +   E+  +  + I ++   
Sbjct: 226 DVDLTDTSVSIAVNKDNPELKNQIDSFLDTLSDKEKREMMDEAIERIPAT 275


>gi|322832577|ref|YP_004212604.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321167778|gb|ADW73477.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 310

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 16/251 (6%)

Query: 34  GFLKCG--INTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L     +      F    + N    G + D  R ++  +     K++ +P + ++  L
Sbjct: 60  GTLTVALAVLGSAPPFGLYARDNKTVIGSEADIARLVADGLG---LKLKVVPASWEDWPL 116

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
            + S + D    N   T  R+      F      D  GF +    K   I+S   ++G  
Sbjct: 117 GVTSGKYDAAIYNITVTKDRKT--KFDFA-TYRQDTLGFYVKSDSKITSITSAPDIAGKR 173

Query: 148 ICVQAGTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L  + K +  K      P           A ++ R DA  G       
Sbjct: 174 IIVGSGTNQEAVLLAWDKENQAKGLPALKPQYVTDDAAATLAIQSGRADATFGPNVTGAY 233

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
             L   +      +P    K+      ++      + V  +  + + +           +
Sbjct: 234 KALLTGKTKLVGTVPGGWPKTANIAVTLKKGNGLVDAVQASLNSAIASGAYIKVLDRWGE 293

Query: 264 VSKDTTNPDVQ 274
             +   + ++ 
Sbjct: 294 SVEKIDHSEIN 304


>gi|330812147|ref|YP_004356609.1| putative diguanylate cyclase/phosphodiesterase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380255|gb|AEA71605.1| putative diguanylate cyclase/phosphodiesterase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 1239

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 78/254 (30%), Gaps = 16/254 (6%)

Query: 12  LIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           ++ L   + +  A  L D     +K    L+ G++     F      G ++G   D+   
Sbjct: 1   MLSLMTWTATAGALTLTDEELRWLKDHPDLRLGVDASWPPFEFRDDQGRYQGLAADYVEI 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +    + I+  P +       +   +ID+L          E    LAF        
Sbjct: 61  IRERLAIKLTPIE--PASWTAVLEQVVQGKIDLLPGIMS---TPERQNYLAFTRPYLDFP 115

Query: 127 QGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              +         ++ +L G  I V         L    + H+   + +    V     A
Sbjct: 116 IVILAHRGGAQPHNLKELYGLKIAVVENYAPHELL----RNHHPDLNLVALPNVSSALQA 171

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 DA  GD+++             +V          LA A+ + +     I+    
Sbjct: 172 LATDEVDAVVGDLASSVWSLRQLKLEGLYVSGETPYRYQ-LAMAVPRDNKILVGILDKVM 230

Query: 246 YAMVTAEELGITQK 259
             M  AE   I QK
Sbjct: 231 ADMSPAEVAEIQQK 244


>gi|89053623|ref|YP_509074.1| extracellular solute-binding protein [Jannaschia sp. CCS1]
 gi|88863172|gb|ABD54049.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Jannaschia sp. CCS1]
          Length = 240

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 16/204 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +  ++ G       +  +   G+  G +      L +          ++  +       
Sbjct: 20  AQDTVRMGTEGAYPPYNFINDAGEVDGLERALGDELCARA---ELTCVWVTNDWDSIIPN 76

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S+  D +      T  RE    + F            M   + +S    L GA I  Q
Sbjct: 77  LTSRNYDTIIAGMSITEDREEV--IDFTQAYIPPTPSLYMAMDEDVS----LDGAVIAAQ 130

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             T     +   + A       + F   +E  AA R    DA   D   L   ++ ++ P
Sbjct: 131 TNT-----IQAGYVAGLEGVTLVEFATPDETVAAVRNGEADAVLADNDFL--TQIADEDP 183

Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235
              ++L  +     +   + +GD 
Sbjct: 184 DMMIVLDPVSLGDGVGMGLREGDE 207


>gi|163761291|ref|ZP_02168366.1| probable amino acid ABC transporter, substrate-binding protein
           [Hoeflea phototrophica DFL-43]
 gi|162281448|gb|EDQ31744.1| probable amino acid ABC transporter, substrate-binding protein
           [Hoeflea phototrophica DFL-43]
          Length = 271

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 67/213 (31%), Gaps = 14/213 (6%)

Query: 43  GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               F+ +       GF++D  RA+ + +     + Q   L   E   AL++ Q + +  
Sbjct: 47  DFPPFSFLDQTSRLAGFNIDLARAICTELEVLA-RCQIQALPWNELPDALKTGQAEAIIS 105

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTL 160
               T   E +    F          F   +      +S   LS   + V  GT  E  L
Sbjct: 106 GIAMTP--ESAAEYRFTRTYLTLPARFAARRDSAGAETSAQTLSQKRVGVIDGTAHEAML 163

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHV 215
            D+F        P+ F R E +  A +    DA  GD   L     +    +     +  
Sbjct: 164 RDWFP----DIKPVTFSRHEWMLNALKTESIDAVFGDGLQLSFWLASQSAETCCGFLDGP 219

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +        LA A+   +            A+
Sbjct: 220 YISQAHLGEGLAIAVSPRNARLAVAFDHALAAL 252


>gi|302518223|ref|ZP_07270565.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78]
 gi|302427118|gb|EFK98933.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78]
          Length = 314

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 87/243 (35%), Gaps = 22/243 (9%)

Query: 21  STNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           +  A +L   +++ G L  G   G    A    +G    G DV+   A++  +     +I
Sbjct: 58  AAAARLLPERVREAGGLTLGGAIGAPPTATYLEDGKTAAGVDVEITDAVAKVLG---IRI 114

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKK 135
                + +    AL S + D+ + N   T  R  +  + F      DGQGF      K  
Sbjct: 115 DRQEASFEAILPALGSGKYDVGTGNFGVTDERRKT--IDFV-TYINDGQGFATRADEKLP 171

Query: 136 GISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            I+ ++QL G +I   AGTT E+TL        KA    Y    +     I  + +  R 
Sbjct: 172 KITDLTQLCGKNIGTGAGTTFEVTLEQNKSLCEKAGKKPYSVKTYSEQGAIWGSLQQGRT 231

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNIVSWTHYAM 248
           D      S +  L+   D+      L +      +  A  +G      +   V+      
Sbjct: 232 DVVM---STINGLRYAVDQQQGLKFLNEYHRLD-VGFAFKKGSDLTHAFQKAVNVLIADG 287

Query: 249 VTA 251
             A
Sbjct: 288 TYA 290


>gi|283833085|ref|ZP_06352826.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Citrobacter youngae ATCC 29220]
 gi|291070705|gb|EFE08814.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Citrobacter youngae ATCC 29220]
          Length = 310

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 76/250 (30%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     I              N    G + D  R ++ ++  + + +     + ++  L 
Sbjct: 61  GKFTVAIAGLSQPPLTVFADDNKTLIGSEADIARLVADSLGLELNVVP---TSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +    K K I     ++G  I
Sbjct: 118 VTSGKYDAAISNITVTKARKE--KFDFA-TYRKDSLGFYVKTGSKLKKIEQAEDIAGLRI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A ++ R DAY G        
Sbjct: 175 IVGSGTNQEAILLAWNDENVKKGLQPFTPVYTKDDAAQTLALQSGRADAYFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
              N +      +     K+      ++ D+     V      ++   +         + 
Sbjct: 235 AALNGKTQLVGSVDGGWPKAAHIAVTLKKDSGLVLPVQTALNGVIGNGDYDKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +     ++ 
Sbjct: 295 VERIPQSEIN 304


>gi|328958176|ref|YP_004375562.1| putative ABC transporter [Carnobacterium sp. 17-4]
 gi|328674500|gb|AEB30546.1| putative ABC transporter [Carnobacterium sp. 17-4]
          Length = 302

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 75/274 (27%), Gaps = 34/274 (12%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILG-----------DIKKRGFLKCGINTGLVGFAEV 50
            K     ++  I +   +  +                 +I++RG L    +  L   +  
Sbjct: 16  KKMVSFGLITFITMTLAACGSKEPTADSSTTKPETMWSEIEERGTLNVATSGTLYPSSFH 75

Query: 51  K-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           +    +  G++V+    +++ +  D   +++  +       ++ S  ID           
Sbjct: 76  QSETDELTGYEVEVINEVANRLDLD---VEFTEMGVDGMLTSVNSGVID--IAAMGIDRD 130

Query: 110 REISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
            E +    +     +     ++      GI ++  L        A T+         + +
Sbjct: 131 GENADKYNYTIPYKYSFGAMVVRESDNSGIETLEDLKDKKAAGAATTSYMKV----ARHY 186

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSP 225
             +         ++        R D    D  +               H I  D    + 
Sbjct: 187 GAEEVIYDNATNDQYLQDVANGRTDVILNDYYSQKMAVAALPEIPVKVHNIFYDPSETN- 245

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              AI +G+      ++         EE+     
Sbjct: 246 --YAIKKGNDILTEKINTAL------EEMKTDGT 271


>gi|302336893|ref|YP_003802099.1| signal transduction histidine kinase [Spirochaeta smaragdinae DSM
           11293]
 gi|301634078|gb|ADK79505.1| signal transduction histidine kinase [Spirochaeta smaragdinae DSM
           11293]
          Length = 677

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 22/207 (10%), Positives = 66/207 (31%), Gaps = 12/207 (5%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +     F  +   G   GF++D   A++  +      +        +    L + ++D++
Sbjct: 42  DYDYPPFEYLDKKGHPTGFNIDLLNAIAEEM---NLSVVIDLGLWSQVRNELTAGEVDLI 98

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
           +     T  R+      F            + +   I ++ +L G  + V++G      L
Sbjct: 99  T-GMYQTEARQKV--FDFSSPHNVVSHALYVKRGSSIQTLDELKGCVVYVESGDVMHDYL 155

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAH-RCDAYTGDISALYALKLTNDRPSEHVILPD 219
            +           +  +   +   A  +  + DA          ++   ++ +  + +  
Sbjct: 156 RERIPEA----FIVKVKSYRDALVALNSDLQVDAVLTSRIQGERIR-EEEKLNNIITVGP 210

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    A+ +G++    +++    
Sbjct: 211 PFYPRKYCFAVQKGNSNLLAVLNDGIT 237


>gi|295108000|emb|CBL21953.1| amino acid-binding domain sensor hybrid histidine kinase
           [Ruminococcus obeum A2-162]
          Length = 951

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 70/194 (36%), Gaps = 12/194 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++ +I +  T     A    D K+   ++ G       F  V  NG  +G+  +  +A
Sbjct: 15  IFVVLVIWMILTVPCQAAETDNDEKQSQIIRVGSFEDT--FDYVDKNGVRRGYGYELMQA 72

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           L+        K +Y+  +    F  L++ +ID +  +  +T  R  +  + F   +  + 
Sbjct: 73  LA---GYTGWKFEYVKCDWSNCFDKLENGEID-IMGDISYTDER--AQKMLFSDESMGEE 126

Query: 127 QGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +  +      +         + G  + V   T  E+ L ++   + +    +     +++
Sbjct: 127 KYILYADLSDMDIGTSDFKFMDGKRVGVLIDTEPEIMLTEWENKNGIHTEHVNVYNNDDV 186

Query: 183 DAAYRAHRCDAYTG 196
           +        D +  
Sbjct: 187 EKKLANQEIDCFVS 200


>gi|212715895|ref|ZP_03324023.1| hypothetical protein BIFCAT_00803 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661262|gb|EEB21837.1| hypothetical protein BIFCAT_00803 [Bifidobacterium catenulatum DSM
           16992]
          Length = 285

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 92/271 (33%), Gaps = 11/271 (4%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +     ++L  ++  T+ S++ +   +G  +  G+     G   +   G++ GFD+   +
Sbjct: 11  LVCAASVVLGTSACGTSISVVTNGLAQGPTIAIGVAADQPGLGFLHG-GEYSGFDISVSQ 69

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +++ +     +I +  +    R  +L+   +D++        +++    + F       
Sbjct: 70  YVANTLGFAQKQIVFKQVLPSTRVSSLEDGTVDMVVDAFAADDVQDG--EVEFAGPYLTV 127

Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
               ++       I+ +  L+G ++CV          AD  +           +   + +
Sbjct: 128 HAALLVRSDSAGTITGIDDLAGKTVCVAKDGMP----ADSVRNLAEDVTVSERDTYPQCE 183

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A    + DA   D +    L  +N       ++ +   +   A A+  G +     V  
Sbjct: 184 TALMIGQADAIAADDAIAAGL-ASNRGGGYLKVVGETFGERSYAIAVKPGQSTLAKQVDA 242

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              +M+           + Q      +  + 
Sbjct: 243 ALQSMMDDGSWKQAMDEMKQSIGYVPDMSIN 273


>gi|254250400|ref|ZP_04943719.1| Extracellular solute-binding protein, family 14 [Burkholderia
           cenocepacia PC184]
 gi|124879534|gb|EAY66890.1| Extracellular solute-binding protein, family 14 [Burkholderia
           cenocepacia PC184]
          Length = 403

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 145 QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 201

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 202 IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPIVK 259

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 260 LTGDANADKPTVDTLRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 316

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 317 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 376

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 377 DTAIAAALA 385


>gi|114321878|ref|YP_743561.1| extracellular solute-binding protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114228272|gb|ABI58071.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 338

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 87/303 (28%), Gaps = 31/303 (10%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             +   L      + S NA  L +I+ RG L   +      ++ V   G+  G DV   R
Sbjct: 12  LAATAALCGATLFAGSANAERLHEIRDRGTLTVALYNDFGPYSCVGTGGELIGVDVALAR 71

Query: 66  ALSSAIFDDPSKIQYLPLNAKE--------------RFLALQSKQIDILSRNTDWTLLRE 111
           AL   +        +   ++ +                 AL  +  D++       + +E
Sbjct: 72  ALGEKLDLKVELAGFGAQDSMDQDLALLQDEQAEDEWDEALLERAPDLMMHVPVDPVFQE 131

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK------GISSVSQLSGASICVQAGTTTELTLADYFK 165
            +         + +    +  +++       +++     G  + V+  T +   L + F 
Sbjct: 132 RNADYDIMGAYFHEAMAVLYDREEIGDLGYSVNTPDPFDGLRVGVEMYTYSYTMLTNGFD 191

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                   +  + V E   A  A    A       L +       P   + L ++     
Sbjct: 192 GRLRSG-VVNHKNVPEAVEALLAGETSAVFAPRGELQSALAAFPEPRTSLALSELRD--- 247

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
                          V         A    +++     +++   +  V+R       + +
Sbjct: 248 ---LFRTDRVRSDWDVGMAVK----AGNPELSRAVEEAMAQLVADGTVERIFNEYGIAWV 300

Query: 286 GEA 288
           G  
Sbjct: 301 GPG 303


>gi|327395226|dbj|BAK12648.1| cystine-binding periplasmic protein precursor FliY [Pantoea
           ananatis AJ13355]
          Length = 312

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 79/250 (31%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   +              N    G +VD  R ++ ++     ++  +P + ++  L 
Sbjct: 63  GALTVAVAALNSPPLTVFSDDNKTLLGSEVDIARLVADSLG---LRLNVVPASWEDWPLG 119

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I S      ++G  I
Sbjct: 120 VASGKYDAAITNITVTKARKE--KFDFA-TYRKDSLGFYVKTSSPIQSLTKAEDIAGLRI 176

Query: 149 CVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + K +       + PI  +       A +A R DAY G        
Sbjct: 177 IVGSGTNQEAILLAWDKENQARGLKPFTPIYTKDDAAQTLALQAGRADAYFGPNVIGAWK 236

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
              N +      +     K+      ++  +     +S     ++   +         + 
Sbjct: 237 AALNGKTRLVGSVDGGWPKAAHIAVTVKKGSGLAEPISTALNGVIQNGDYQKVLDRWGEG 296

Query: 265 SKDTTNPDVQ 274
            +   + ++ 
Sbjct: 297 VERIDHSEIN 306


>gi|296139758|ref|YP_003647001.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
 gi|296027892|gb|ADG78662.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
          Length = 331

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 63/198 (31%), Gaps = 14/198 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGL--VGFAEV--KANGDWKGFDVDFCRALSSAIFDDPS 76
           +  A +   ++ RG L+ G  +G     F          + G + D    ++ A+     
Sbjct: 60  AAAALLPQPVRDRGTLRVGHGSGAGNAPFYFPATDDERVFIGDESDIAHLIAGALGLKLE 119

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           +      + +  FL + S Q D+   N   T  R+      F      D    +      
Sbjct: 120 E---SNTSWEGLFLGIDSGQFDLGVSNITVTEARKE--KYDFATYRKDDLAVEVQESSSL 174

Query: 137 ISSVSQ-LSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
             +    LSG ++ V +GT  E  L    AD   A         ++      AA  + + 
Sbjct: 175 TFTGPDSLSGKTVAVGSGTNQERILQRYDADLRAAGKPAITIKNYQDNTGTYAALASGQI 234

Query: 192 DAYTGDISALYALKLTND 209
           DAY G             
Sbjct: 235 DAYFGPNPIAAFHVAQTK 252


>gi|315125851|ref|YP_004067854.1| transport binding protein [Pseudoalteromonas sp. SM9913]
 gi|315014365|gb|ADT67703.1| transport binding protein [Pseudoalteromonas sp. SM9913]
          Length = 487

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 11/240 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   ++I+ L+IL     +   S  L  IK    ++ G       +      G+ +GF
Sbjct: 1   MLKIKLITIITLVILLCACNTQEQSTQLAQIKSENKIRVGTLASASNY-YQAVQGE-QGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +  +A +  +  +   + +  L+  + F  L S  +D+++    +   R       + 
Sbjct: 59  EFELSQAFADYLGVELEIVPFFNLS--DMFARLDSGDLDLIASGLTFNKARAKRYR--YG 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFER 178
           P      Q  +  + +           +  V A ++  LTL +  + + ++ +       
Sbjct: 115 PTYRTISQKLVFKQGRERPRDFDDLTGNFTVIAKSSHSLTLEEIKQNNPDLTWSETEEFD 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            EE+  A      D    D   L   +  +       I   +     +A  + + + +  
Sbjct: 175 EEELLQAVIDGEIDYTLADSHTLALFRRYHPN---LSIGFSVTRNDSIAWILRKSNDDSL 231


>gi|237734949|ref|ZP_04565430.1| ABC amino acid transporter [Mollicutes bacterium D7]
 gi|229381725|gb|EEO31816.1| ABC amino acid transporter [Coprobacillus sp. D7]
          Length = 273

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 61/196 (31%), Gaps = 21/196 (10%)

Query: 28  GDIKKRGFLKCGINTGLVGFAE-----------VKANGDWKGFDVDFCRALSSAIFDDPS 76
             I +      G+      F             ++ +G   G+DV   + ++ ++     
Sbjct: 24  KSIDEGDVFVVGMECNYPPFNWQTNTQSDTAVELEGSGYADGYDVYIAKEIAESLDKK-- 81

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +    L       AL+S +ID +         RE   G+ F    Y      I+     
Sbjct: 82  -LVIKKLAWNGLQPALESGEIDAIIAGMTADEEREK--GIDFTTPYYQSEMVMIVRGDDA 138

Query: 137 ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + + +        V   +T+  T+ D     N   H    +   E+  A ++   D  
Sbjct: 139 SKNYTDIQQFSGKTIVGQMSTSYDTVIDQI---NGVDHATPKQSYPEMLVALQSGEVDGI 195

Query: 195 TGDISALYALKLTNDR 210
           T ++     +  TN  
Sbjct: 196 TAELPVAQGILETNQD 211


>gi|302344379|ref|YP_003808908.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Desulfarculus baarsii DSM 2075]
 gi|301640992|gb|ADK86314.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Desulfarculus baarsii DSM 2075]
          Length = 972

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 86/258 (33%), Gaps = 17/258 (6%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDI---KKRGFLKCGINTGLVGFAEVKANG 54
           M    ++  ++++   +L       +A+        ++R  +    +        +  +G
Sbjct: 1   MKALDRNLLLTVILAALLCAPPLGGDAAWAARQAPAEERRTIVVVGDKTYAPIEFLGPDG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
             +G  VD  R  S         I Y  ++  +    ++ ++ D++S        RE + 
Sbjct: 61  RPRGVAVDMWRLWSQKTG---VAIDYRLVDWAQAIEMVRQRRADVISGLF----PREGAG 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
               RP    D   F   K KG+     L+G  + V  G   E  L             +
Sbjct: 114 LWFCRPFMKVDAHLFFSRKIKGLVDSRDLAGFRVGVVRGDYLEGLLRVEAP----GAKLV 169

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           + E  E++     A R + +  D      L   +D           +    L P + +G 
Sbjct: 170 LAETFEDMIKMAIAGRVEVFACDEMVAAFLLAKHDAEDMFRRTAKPVHTDDLRPGVAEGH 229

Query: 235 TEWYNIVSWTHYAMVTAE 252
            E   +V+    A+  AE
Sbjct: 230 DEMMRLVNAGFDAIDEAE 247


>gi|256392948|ref|YP_003114512.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256359174|gb|ACU72671.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 323

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 79/255 (30%), Gaps = 22/255 (8%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGL----VGFAEVKANGDWKGFDVDFCRAL 67
           ++       +  A +   ++ RG L  G         +    V   G   G D+D   A+
Sbjct: 56  VLSAIQADPALKAELPAAVQSRGTLILGTTKTTGNSGLPHDGVDPTGKTVGLDIDLREAV 115

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +              +     +Q+ + D+   N   T  RE    + F      DGQ
Sbjct: 116 ARKLG---VTWDVQYGTFQTVIPGVQNGKYDVGQDNFGVTTARE--QVVDFA-TYLDDGQ 169

Query: 128 GFIMHKK---KGISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVE 180
            F+  K      IS+++ L G S+    GTT +  L D       A    Y    F    
Sbjct: 170 AFLGSKDVSATSISTLTDLCGLSVATSPGTTFQQILTDGAGKCAAAGKKPYQVQYFADTA 229

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I       + D Y G   +L                    S +P+     +G      I
Sbjct: 230 PIFLGLANGKVDIYFGPTLSLKYDAQHIAG----TKFLGQYSSTPVGFVTAKGAPTGKAI 285

Query: 241 VSWTHYAMVTAEELG 255
            S    A++ + +  
Sbjct: 286 -SDAINALIASGDYA 299


>gi|312879705|ref|ZP_07739505.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Aminomonas paucivorans DSM 12260]
 gi|310782996|gb|EFQ23394.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Aminomonas paucivorans DSM 12260]
          Length = 512

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 65/228 (28%), Gaps = 17/228 (7%)

Query: 32  KRGFLKC-GINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +   L+  G + G V F            GF+VD   A++  +   P    ++  +    
Sbjct: 22  EEKVLRWAGDSEGGVPFMFNDPKDVKRLIGFEVDIVEAVAKILGRRP---VFVNNSWDNL 78

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGAS 147
              L+ K  D+     + T   E    +AF    Y       +    + I  +  L G  
Sbjct: 79  IPGLERKLYDVAINGLEVTPEHE--QEVAFSIPYYHTFLQIAVRRDNQDIQKLEDLRGKV 136

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
                 + +   L D       K     +             R D    D     AL   
Sbjct: 137 AGTLKQSYSYFVLKDL-----GKVDIRTYIVEANAYEDLANGRLDGTLFDAPI--ALYSA 189

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              P    + P +      A A+ + D      V+     +  + EL 
Sbjct: 190 GFNPEVKFVGPPVGEIR-YAMALRKEDKALLGEVNAALVQLRDSGELR 236


>gi|120602081|ref|YP_966481.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|120562310|gb|ABM28054.1| extracellular solute-binding protein, family 3 [Desulfovibrio
           vulgaris DP4]
          Length = 505

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 20/248 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           L   +    +  + +I++RG L+  +           A+G+ +G +V+  RA ++ +   
Sbjct: 54  LILPAEKAFSGDVKEIRQRGVLRVLV--TYRKGDFFIADGELRGVEVELARAFAAWLGKK 111

Query: 75  ------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQ 127
                 P +  ++P+   E   AL+  + DI +     T  R     + F         +
Sbjct: 112 GGKKALPVRAIFIPVAFDELLTALEQGKGDIAAAGFTVTEARSA--RVPFATPYLRGIDE 169

Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLAD---YFKAHN----MKYHPIVFERV 179
            F + K   + +    L+G ++ V  G++ E  L +      A          P    + 
Sbjct: 170 VFAIRKGAPVPTSLDELAGRTVHVVRGSSHEQHLGELNVRLAAQGLAPLNIVTPSADLQP 229

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E++         D    D       +           L     +  +A A+        +
Sbjct: 230 EDLFDLLGTGAIDLMVADSHRARLWRRAMPDVQVVPSLQLKTGQD-IAWAVRPDAPGLLH 288

Query: 240 IVSWTHYA 247
            V+    A
Sbjct: 289 EVNAFFAA 296


>gi|291618875|ref|YP_003521617.1| FliY [Pantoea ananatis LMG 20103]
 gi|291153905|gb|ADD78489.1| FliY [Pantoea ananatis LMG 20103]
          Length = 312

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 79/250 (31%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   +              N    G +VD  R ++ ++     ++  +P + ++  L 
Sbjct: 63  GALTVAVAALNSPPLTVFSDDNKTLLGSEVDIARLVADSLG---LRLNVVPASWEDWPLG 119

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I S      ++G  I
Sbjct: 120 VASGKYDAAITNITVTKARKE--KFDFA-TYRKDSLGFYVKTSSPIQSLTKADDIAGLRI 176

Query: 149 CVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + K +       + PI  +       A +A R DAY G        
Sbjct: 177 IVGSGTNQEAILLAWDKENQAMGLKPFTPIYTKDDAAQTLALQAGRADAYFGPNVIGAWK 236

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
              N +      +     K+      ++  +     +S     ++   +         + 
Sbjct: 237 AALNGKTRLVGSVDGGWPKAAHIAVTVKKGSGLAEPISTALNGVIQNGDYQKVLDRWGEG 296

Query: 265 SKDTTNPDVQ 274
            +   + ++ 
Sbjct: 297 VERIDHSEIN 306


>gi|218682759|ref|ZP_03530360.1| extracellular solute-binding protein family 3 [Rhizobium etli CIAT
           894]
          Length = 291

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 67/217 (30%), Gaps = 14/217 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   +     F     NG   GFDVD  R + S +     K Q   +   +   AL + 
Sbjct: 60  LRFLTSVDFPPFNFTDQNGKLSGFDVDLAREICSELEIS-DKCQIQAIPFADLKDALAAS 118

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           Q D +      T   E+     F          F+ +        + + LS   + V  G
Sbjct: 119 QGDAVIAGLAVTP--ELRRQFVFSRPYLMLPARFVRNLAVPLDGKTAAALSKRPVGVVRG 176

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           T  E  L+ +F           F+  + + AA R  + DA   D   L     +      
Sbjct: 177 TVHEAMLSAFFP----TIKAQPFDTKDALLAALRERKVDAAFADALQLSFWVSSPASAKC 232

Query: 213 ----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +   L +      +   + Q D+     +    
Sbjct: 233 CALFDGPYLSEQFLGEGMTIMLRQKDSVLTAAIDHAL 269


>gi|218660299|ref|ZP_03516229.1| extracellular solute-binding protein family 3 [Rhizobium etli
           IE4771]
          Length = 163

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 35  FLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            ++ G+ N     F    A+G+W G+++D   A+ + +     K   + ++      AL+
Sbjct: 23  EVRFGVMNESYPPFFAKDASGEWHGWEIDLMNAVCAEM---KEKCSIVDISWDGLIPALE 79

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--QLSGASICVQ 151
           SK+ D++  +   T  R     + F    Y   +     +     +     + G +I +Q
Sbjct: 80  SKKFDVIWSSMSNTAERSKV--IDFTDKYYNTPEHADRSQGPEAGAPPAEDVKGKTIGIQ 137

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFE 177
             T        YF     +      +
Sbjct: 138 VSTIQSEYYKKYFAEAADEKTYQTLD 163


>gi|172057261|ref|YP_001813721.1| arogenate dehydratase [Exiguobacterium sibiricum 255-15]
 gi|171989782|gb|ACB60704.1| Arogenate dehydratase [Exiguobacterium sibiricum 255-15]
          Length = 273

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 67/220 (30%), Gaps = 15/220 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            ++     +  G       F  +      ++GFD+D   + +        +++++P    
Sbjct: 35  QNVFTTKKIVVGTTGDYKPFTYLNRQTNQYEGFDIDVICSFAEVAG---LEVEFVPTTWG 91

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI----SSVSQ 142
                L++ +  ++       + RE  +   F        +  ++               
Sbjct: 92  TLTRDLRAGKFHMVVGGVTKNIERE--IVGDFTKSYLSFQKTPLVRATDLDLLTSIEAIN 149

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
               +I +  G T E  +   F         +++     I AA  A   D    D +   
Sbjct: 150 QPDVTIGLNPGGTNEQFVRQTFDQA----RIVMYADNLTIPAAVAAGEVDVMITD-TVEA 204

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               + D+      + +    +  +  I    TE  ++++
Sbjct: 205 IYYASLDQRLGAPKIHEKWIPAEKSYLIQDRQTEVLDVMN 244


>gi|257056922|ref|YP_003134754.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Saccharomonospora viridis DSM 43017]
 gi|256586794|gb|ACU97927.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Saccharomonospora viridis DSM 43017]
          Length = 264

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 72/234 (30%), Gaps = 13/234 (5%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
                 + L  I+  G +K GI    + +   +  G+  G   +  +A+  A+  +   +
Sbjct: 2   GGQGGGNTLQRIRDAGTVKVGIAGE-IPYGFTQG-GEVTGESPEVAKAVFKALGVE--NV 57

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +   +   +   ALQ+ Q D+++        R      +                 + ++
Sbjct: 58  EATQVEFDQLIPALQAGQYDMVAAGMAIIPKRCEQAQFSTVDYVTNTAFLVPQGNPQDVT 117

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S   +    + +   + T   +               +    E+  A +A R  A     
Sbjct: 118 SFEDIKEKGLGLAVLSGT---IEQQVAQALNVGEIQTYGGQSEMLQALQAGRAYAGALTD 174

Query: 199 SALYALKLTNDR---PSEHVILPDIISKSPL---APAIIQGDTEWYNIVSWTHY 246
            +L AL   N           +P +  K  +        +G+TE  N  +    
Sbjct: 175 ISLRALLDQNPGVKFEVTEGFVPVVDGKEQIQAGGFVFRKGETELVNAFNEELT 228


>gi|302874114|ref|YP_003842747.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|307689628|ref|ZP_07632074.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
 gi|302576971|gb|ADL50983.1| extracellular solute-binding protein family 3 [Clostridium
           cellulovorans 743B]
          Length = 311

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 20/220 (9%)

Query: 2   YKDFFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
            K     ++      F             S       L  IK+RG +   +++     A 
Sbjct: 7   KKTLIFILIGTFAQIFIIHQTKTINAENLSAGDTNDRLALIKERGVINV-LSSNDPPIAY 65

Query: 50  VKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ-SKQIDILSRNTDWT 107
           +     ++ G D +    ++  +     K++   +  +     L  +   D+ + +    
Sbjct: 66  IDPVTKEFTGVDGEIIHEIARRLG--IKKVKMEEVPFENLLTELNTNDNADMAASSIYVN 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             R+    + F  I Y + +  +  +    +    L  A++ VQ GT     +  +++ +
Sbjct: 124 EERKK--QVLFTNIIYKESEAIVTPRVSKFTFKEDLKNATLGVQLGTVYSELVQKWYQEN 181

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
            +K     +    E+  A    + DA   D      L  T
Sbjct: 182 LIKA-VKYYNTQNELLKAVNTGKVDACMTDSIVSSYLLST 220


>gi|307331403|ref|ZP_07610522.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces violaceusniger Tu 4113]
 gi|306882962|gb|EFN14029.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces violaceusniger Tu 4113]
          Length = 291

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 81/249 (32%), Gaps = 16/249 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +  +      ++L  ++ +G ++ GI    + F  +  NG++ G   +  + +   +   
Sbjct: 26  VSGSGAKDGGNLLERLRSQGTVRLGIAGE-IPFGYIDKNGEFTGEAPEIAKVIFKRLGV- 83

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K+Q +P         L+S+Q D++S         +    + F    Y     FI+ K 
Sbjct: 84  -PKVQPVPTEFGSLIPGLRSQQFDVVSAGMYINP--DRCAQVIFSDPDYRMRDAFIVRKG 140

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRC 191
               I +   +      +  GT        Y +A  +K    ++         A    R 
Sbjct: 141 NPKNIHNYEDIVKQKAKMATGTAYAEI--GYAEAVGIKQSDMLILPDQLAGLLAVEQGRA 198

Query: 192 DAY--TGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTH 245
           D +  T         +  + +          +   P       A    +T+  +  +   
Sbjct: 199 DVFAGTTVTVHNVVKQRNSRQAEATEPFQAYVDGKPDIGAGGFAFRPEETKLRDAFNIEL 258

Query: 246 YAMVTAEEL 254
           + M  + EL
Sbjct: 259 HKMKKSGEL 267


>gi|116686493|ref|YP_839740.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|116652208|gb|ABK12847.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 369

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 111 QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 167

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 168 IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPIVK 225

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 226 LTGDANADKPTVDTLRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 282

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 283 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 342

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 343 DTAIAAALA 351


>gi|154495954|ref|ZP_02034650.1| hypothetical protein BACCAP_00235 [Bacteroides capillosus ATCC
           29799]
 gi|150274837|gb|EDN01893.1| hypothetical protein BACCAP_00235 [Bacteroides capillosus ATCC
           29799]
          Length = 288

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 84/244 (34%), Gaps = 24/244 (9%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75
             S +   S +  +K +G L  GI T         + + +W GFD D  +A + ++  + 
Sbjct: 40  SGSQAAAESDMQYVKDKGTLVVGI-TYFEPMDYKAEGSDEWIGFDADMAKAFAESLGVE- 97

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--K 133
             +++  +    +   L+SK ID++      T   E++  +A       + Q  +    K
Sbjct: 98  --VEFSEITWDYKVEELESKAIDVVWNGMTLTD--EVTSSMATSNPYCTNYQVLVYPADK 153

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                +++ L G S+ V++G+  E           +    +  +          A   DA
Sbjct: 154 AAEFENLTSLEGLSVAVESGSAGEDAAEA------LGASTVAVQSQANTLMEVSAGTSDA 207

Query: 194 YTGD---ISALYALKLTNDRPSEHVILPDII--SKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              D    +A+     +    +  V L +              +G      +V   +   
Sbjct: 208 AVIDVLMAAAMIGEGTSYADLAYSVNLNEAQGLDAEKYGVGFRKGSD----LVDAFNEFW 263

Query: 249 VTAE 252
             AE
Sbjct: 264 AAAE 267


>gi|24213874|ref|NP_711355.1| ABC transporter substrate-binding protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45658357|ref|YP_002443.1| cystine-binding periplasmic protein precursor [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|24194720|gb|AAN48373.1| substrate binding protein of an ABC transporter complex [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45601600|gb|AAS71080.1| cystine-binding periplasmic protein precursor [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 330

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 87/257 (33%), Gaps = 32/257 (12%)

Query: 2   YKDFFVSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
            +   +   C++  +F   +        N+S L +I ++G LK   +     F    +  
Sbjct: 45  KRLVLIGSFCILYGYFCLQAEENTFKYYNSSRLKEILEKGELKVAGDPSYEPFYIPNSKE 104

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + GFD +  +A +  +      + Y      E   A+++K+ DI        L R  S 
Sbjct: 105 GYPGFDYELGKAYADFLGVKYKFVSYP--EFNEFAEAIKNKEADIALSGISSNLER--SK 160

Query: 115 GLAFRPITYFDGQGFIMHK----------------KKGISSVSQLSGASICVQAGTTTEL 158
            L F           ++ K                 + I  +S LSG +  V++ +    
Sbjct: 161 KLKFSGAYLVATPAALIRKSALPPPPEGNIITTQSFRSILDLSDLSGVTFAVRSFSNRHE 220

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVIL 217
            L   FK +        +        A +    +    D   + +L L +    S    L
Sbjct: 221 YLLKKFKNN----RIFTYVDTSSAWEAVKNGTANCLVADSFYIKSLILKDKSIASNFRPL 276

Query: 218 PDIISKSPLAPAIIQGD 234
            + + +  ++ A  QGD
Sbjct: 277 LEPVQREDISAAFPQGD 293


>gi|153007723|ref|YP_001368938.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151559611|gb|ABS13109.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 282

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 76/273 (27%), Gaps = 35/273 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---------------LGDIKKRGFLKCGINTGLV 45
           M +     ++ L        +  +                 L  ++    L+        
Sbjct: 1   MKRYLPRLLVALAFTCGAHSAWASDAQPEAPSFINQKERLPLPSLQALNRLRFLTTVDFP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F  +   G   G++VD  +AL   +  D    Q   +   E    L S Q + +     
Sbjct: 61  PFNMLGDQGQLSGYNVDLAKALCRQLGVD-DVCQIEAVPWNELEERLLSGQAEAIIAG-- 117

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADY 163
           W    E     AF          F        +    +   G  + V AG+  E  L  Y
Sbjct: 118 WKSTDENRDQFAFSRSYMRLPARFATTNAGTFNDDAVTATKGKGVGVVAGSAHEQLLKSY 177

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--------V 215
           F           +     + A  ++ +  A   D     +L +  + P  H         
Sbjct: 178 FPQA----IAKSYPDASLMFADLKSGKVSAVFHD---GMSLSMWLNSPEGHACCSFTAGA 230

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            L      S L+ A+ Q +    +  +    A+
Sbjct: 231 YLAPQYLGSGLSIAVAQKNAPLASAFNNALQAL 263


>gi|154497091|ref|ZP_02035787.1| hypothetical protein BACCAP_01384 [Bacteroides capillosus ATCC
           29799]
 gi|150273490|gb|EDN00618.1| hypothetical protein BACCAP_01384 [Bacteroides capillosus ATCC
           29799]
          Length = 298

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           +G L  G N     F  + ++G   GFDVDF + L + +  +   +    ++      AL
Sbjct: 200 KGTLVMGTNCEFEPFEYLTSDGTPTGFDVDFVKYLCAEMGYE---VTIENMDFDALIPAL 256

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           QS +ID ++        RE      F    Y   Q  ++ K 
Sbjct: 257 QSGRIDFIAAGLTRNEEREK--NANFTDGYYEATQSIVVLKP 296


>gi|303234492|ref|ZP_07321129.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
 gi|302494326|gb|EFL54095.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
          Length = 526

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 69/228 (30%), Gaps = 34/228 (14%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M    +     ++ L+++F    +          ++     G+      F          
Sbjct: 1   MKNFTRKLISVVMILMMMFVFVNN------ESFAEKDTFVIGMEANYAPFNWSQSTDANG 54

Query: 50  ----VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                 + G++  G+D+   + ++ ++      I+   +       A+ S ++D +    
Sbjct: 55  AYPIENSKGEYANGYDLQIAKKIADSLGKKLVVIK---MEWDGLAPAVMSGKVDAIIAGM 111

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLA 161
             T  R+    + F    Y      +  K        S++ L G  I  Q  T     + 
Sbjct: 112 SPTKERKE--QIDFSDTYYSSDLVIVTKKDSKYINAKSLNDLKGFKITGQLNTFHYSVID 169

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                  +       E    + +A  A + D Y  +     + + +N 
Sbjct: 170 QIKDCDKLP----AMESFPSMLSAVLAEKIDGYVSEKPQALSAEASNA 213


>gi|254513734|ref|ZP_05125797.1| extracellular solute-binding protein, family 3 [Rhodobacteraceae
           bacterium KLH11]
 gi|221531964|gb|EEE35021.1| extracellular solute-binding protein, family 3 [Rhodobacteraceae
           bacterium KLH11]
          Length = 221

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 17/217 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               ++         +  +   G+  GF+ +    L      D    +++          
Sbjct: 3   AADTVRMASEGAYAPYNFINDAGELDGFERELGDELCKRAQLD---CEWVTNEWDSIIPN 59

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L S   D +      T  R+    + F                 G+S+   L    I  Q
Sbjct: 60  LVSGNYDTIMAGMSITDERDEV--IDFTQNYTRPDPS----AYVGVSTDIDLDNGVIAAQ 113

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           + T     +A            + F   EE  AA R    DA   D   L      +D  
Sbjct: 114 SATIESAYVAT------TGATLVEFTTSEETLAAVRNGEADAVLADKGFLAPFVSESDDL 167

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
               +  D+I    +   + + DTE          +M
Sbjct: 168 I--FVGDDVILSKGVGMGVRESDTELKEKFDAAIQSM 202


>gi|172036053|ref|YP_001802554.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
           51142]
 gi|171697507|gb|ACB50488.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
           51142]
          Length = 1084

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 11/221 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY-LPLNAKERFLALQ 93
            +  G+         V + G+ +GF +D   A++        +++Y +  N  E   AL+
Sbjct: 36  TVTAGVPRYFPPTYSVDSQGNPQGFAIDVIEAVAKRA---NLQVKYEIKENWSETLQALE 92

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
             ++D++  N   T  R           T      F++   + I ++  LSG++I V   
Sbjct: 93  KGEVDLV-PNMGVTTTRSEIFRYTDPIETINICL-FVLRDNQKIKTLDDLSGSTIAVIER 150

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 L  Y             E  E       +   D        +  L  T      
Sbjct: 151 NEAINLLKQY-----HNVKLESLESPEHALFHLLSGDVDGLAYPEPPIKHLAQTISVDYR 205

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
              +   + + P A A+ +   +    +       + + E 
Sbjct: 206 LKTIKPALKEVPRAIAVHRHHPQLLQRLDVALDHFLNSSEY 246


>gi|288942568|ref|YP_003444808.1| family 3 extracellular solute-binding protein [Allochromatium
           vinosum DSM 180]
 gi|288897940|gb|ADC63776.1| extracellular solute-binding protein family 3 [Allochromatium
           vinosum DSM 180]
          Length = 291

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 71/292 (24%), Gaps = 30/292 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M     + +  L+I        +   L  I+    L+  I     G +          G 
Sbjct: 1   MSHALRLFVGVLLIAMHGPVMADDDRLQRIRTAQTLRVCIWPDYYGISFRNPKTLQLSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D  R L+  +  +     ++          +   + DI       T  R+    L F 
Sbjct: 61  DADLARELARDLGVEAE---FVDSAFASLIEDVLGDRCDIAMFAIGITPARQQH--LRFT 115

Query: 120 PIT-YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                 D         + I   S +   G  + V  GT  E       +         V 
Sbjct: 116 QPYLASDIYAITTRTNRRIRDWSDIDQPGTVVAVAKGTLHEAV----MREKLQHAELRVL 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQ- 232
           +     +   ++ R D +  D       +   D   +   L                   
Sbjct: 172 DTPHSREQEVQSGRADIFMTD---YAYSRRMLDN-HDWARLVSPTQSDQNTGYTWMTTPG 227

Query: 233 -GDTEWYNIV------SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
               +W  IV        T YA   A         + +           R L
Sbjct: 228 IDQHDWERIVSPSASYHLTPYAWAMAPGDDAFHARVERFITAIKTDG--RLL 277


>gi|227115101|ref|ZP_03828757.1| ABC transporter, substrate binding protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 311

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 80/247 (32%), Gaps = 47/247 (19%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG-------DIKKR-------------------- 33
           M +  F+++  L  L   +  T+A           D+K                      
Sbjct: 1   MKRSPFITVTGLATLLSATLVTHAQAQDAGFVSRIDLKANQTPIRTEKNAEAIAQIPANF 60

Query: 34  -----GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
                G L   ++       + +   N    G D D  R ++  +     +++ +P + +
Sbjct: 61  KFVTPGKLTIAVSALSSPPLSLLADDNKTLIGSDADIARLVADGLG---LELKLVPASWE 117

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQL 143
           +  L + + + D    N   T LR+      F      D  GF +     I+S      +
Sbjct: 118 DWPLGITAGKYDAAIFNIAVTKLRKE--KFDFA-TYRIDTLGFYVKSTSKITSINKPEDV 174

Query: 144 SGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +G  + V +GT  E  L  + + +         P+        + + ++ R DA+ G  S
Sbjct: 175 AGLKVIVGSGTNQENILLGWDRQNRANGLPPVQPVYVTDDAAANLSIQSGRVDAFFGPHS 234

Query: 200 ALYALKL 206
                  
Sbjct: 235 IGAYKAA 241


>gi|307132725|ref|YP_003884741.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
 gi|306530254|gb|ADN00185.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
          Length = 313

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 83/250 (33%), Gaps = 19/250 (7%)

Query: 34  GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   I+       A +   N    G D D  R L+ A+     K++ +P   ++  L 
Sbjct: 68  GTLTVAISNHSSPPLALLADDNKTRIGSDPDIARLLADALG---LKLKLVPTAWEDWPLG 124

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS---SVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I      + ++G  +
Sbjct: 125 IASGRYDAAIINIAVTKARKE--RFDFA-TYRVDTLGFYVKSTSRIQAIRGPADVAGLKV 181

Query: 149 CVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +         P+        + + ++ R DA+ G  S     
Sbjct: 182 IVGSGTNQENILLGWDRQNRAQGLPPVQPVYVTDDAAANLSIQSGRVDAFFGPHSIGAYK 241

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +     I P +    P+A    +G+      +S     ++   +         + 
Sbjct: 242 AALTGQTRMVGIGPTVA---PVAVTTRKGNG-LAQPISTALNGVIAGGQYAQVLDRWGEN 297

Query: 265 SKDTTNPDVQ 274
            +  T  +V 
Sbjct: 298 DEKVTRSEVN 307


>gi|330809175|ref|YP_004353637.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377283|gb|AEA68633.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 268

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 15/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K   + +  L + F   ++  A ++   + K   L                    KG 
Sbjct: 1   MHKPRLL-VAALSLGFCAQWAVAAPVVPERLLKVDKLVYCSGMDSPPLVSFDEAQKPKGL 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD    ++  + D    +++  +       AL ++Q D++         R   + +   
Sbjct: 60  TVDLGLEIAKRLGDKK--VEWRVIPFSGLLPALLARQCDMIVDQLFDKPERREVIDI--- 114

Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY----FKAHNMKYHP 173
               +  Q  ++ K     + +++ LS   + V  G+T +  L        KA       
Sbjct: 115 VNYMYSSQAVVVPKGNPKGLKTLADLSADKVAVLNGSTIKTLLDAENETLAKAGKPPMKL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +V+    +   A R  + DAY                P          S+      I + 
Sbjct: 175 VVYNSDTDAFQALRISQVDAYGTT-VETAGYYAAMA-PDLFEEGVPAFSRILTGLGIRKD 232

Query: 234 DTEWYNIVSWTH 245
           D +    V    
Sbjct: 233 DPQLTAAVQQVI 244


>gi|290955798|ref|YP_003486980.1| substrate-binding protein transporter associated [Streptomyces
           scabiei 87.22]
 gi|260645324|emb|CBG68410.1| putative secreted substrate-binding protein transport system
           associated [Streptomyces scabiei 87.22]
          Length = 344

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 17/198 (8%)

Query: 23  NASILGDIKKRGFLKCG---INTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78
           +A +   ++K G L  G   + +G      + ++     G + D  R +++    +P   
Sbjct: 74  SAKLPAALEKSGKLVIGSGTLPSGSPPLGFIGSDQKTVTGSEPDLARLVAAVFGLEPEV- 132

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
                  +  F+ + S ++D+   N   T  R       F      D   F   K    S
Sbjct: 133 --RQSTWENLFIGIDSGKVDVGFSNITDTEER--KQKYEFA-SYRKDDLAFETKKDNDWS 187

Query: 139 SVSQ---LSGASICVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                  L+G ++ V  GT  E  L ++     K          F+    +  A  + + 
Sbjct: 188 FDGDYENLAGRTVSVGNGTNQEKILLEWKAKLAKEGKKPLTVKYFQETNSLYLALSSGKI 247

Query: 192 DAYTGDISALYALKLTND 209
           DAY G    L       +
Sbjct: 248 DAYFGPSPNLAYHAAKTE 265


>gi|227529781|ref|ZP_03959830.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350265|gb|EEJ40556.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 486

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 14/214 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWK----GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
                 N     F    + G +     G +++  + +S     +  K +  P++      
Sbjct: 36  TYTFATNNTFEPFEIQDSKGGYSGKNPGIEIEILKKISK---HEHFKYKLKPMSFNGDLQ 92

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           AL+S Q+D +      T  R+      F    Y DG    + K   I S+ QL G ++  
Sbjct: 93  ALESGQVDAVIAGMSVTDERKA--KYDFSTPYYTDGVVMAVAKDSNIKSMKQLKGKTVSA 150

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           ++GT+  L L      +  K     F+    +    +     A   D   L         
Sbjct: 151 KSGTSAALYLKKNQDKYGYK--IRYFDSSNTMWNDVKNGNTAATFDDGPVL--QYGIKTG 206

Query: 211 PSEHVILPDIISKSPLAPAIIQGDT-EWYNIVSW 243
               ++    I   P+A    +G   E    V+ 
Sbjct: 207 VPLKIVTKKPIDAQPVAVGFQKGKNLELQKKVND 240


>gi|217974239|ref|YP_002358990.1| family 3 extracellular solute-binding protein [Shewanella baltica
           OS223]
 gi|217499374|gb|ACK47567.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS223]
          Length = 285

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 15/184 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G N     +A     G+ +G DVD  RA +  +  +   I ++ + AK     L+
Sbjct: 33  KTIKVGYN-DWPPYAWQDPQGEAQGLDVDLMRAFAVYLGCE---INFINVPAKRSHQMLK 88

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASIC 149
           + Q+D+L      T  R+      F      +            +  +     +    + 
Sbjct: 89  AGQLDVLMGA-TMTDERQAY--AHFSSYYRDEELRLFVLDEQKDQINVDKWEDIFTKKLR 145

Query: 150 VQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +   ++     ADY ++          ++    ++        R D   GD  A+  +  
Sbjct: 146 LLVPSSGWYG-ADYQESQYRLEQEHLLVLSPDSDKSVQMLTYGRGDMIVGDTMAMPYIAS 204

Query: 207 TNDR 210
            +  
Sbjct: 205 QHQH 208


>gi|160874427|ref|YP_001553743.1| extracellular solute-binding protein [Shewanella baltica OS195]
 gi|160859949|gb|ABX48483.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS195]
 gi|315266663|gb|ADT93516.1| extracellular solute-binding protein family 3 [Shewanella baltica
           OS678]
          Length = 285

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 15/184 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +K G N     +A     G+ +G DVD  RA +  +  +   I ++ + AK     L+
Sbjct: 33  KTIKVGYN-DWPPYAWQDPQGEAQGLDVDLMRAFAVYLGCE---INFINVPAKRSHQMLK 88

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASIC 149
           + Q+D+L      T  R+      F      +            +  +     +    + 
Sbjct: 89  AGQLDVLMGA-TMTDERQAY--AHFSSYYRDEELRLFVLDEQKDQINVDKWEDIFTKKLR 145

Query: 150 VQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +   ++     ADY ++          ++    ++        R D   GD  A+  +  
Sbjct: 146 LLVPSSGWYG-ADYQESQYRLEQEHLLVLSPDSDKSVQMLTYGRGDMIVGDTMAMPYIAS 204

Query: 207 TNDR 210
            +  
Sbjct: 205 QHQH 208


>gi|330953422|gb|EGH53682.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7]
          Length = 214

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 4/191 (2%)

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            R ++  +F+DPSK++++  ++  R   L + ++DI  +    T  R  +  +AF    Y
Sbjct: 1   GRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYY 58

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            +G   ++        +  L  A   V       +   +       K     ++ V+ + 
Sbjct: 59  REGVALLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMY 118

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A  + R D    D S+     L    P  +       S    A A+ +GD +W N V+ 
Sbjct: 119 QAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNT 176

Query: 244 THYAMVTAEEL 254
             +  +T  E 
Sbjct: 177 ALHEAMTGVEF 187


>gi|307708017|ref|ZP_07644487.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615935|gb|EFN95138.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 490

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 26/245 (10%)

Query: 40  INTGLVGFAE-----------VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +      F             +     +  G+DV   + ++  +  +P  ++      + 
Sbjct: 1   MEAAYAPFNWTQDDDSNGAVKIDGTNQYANGYDVQIAKKIAKDLGKEPLVVK---TKWEG 57

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              AL S +ID++      T  R+    +AF    Y      ++ K    ++   L   +
Sbjct: 58  LVPALTSGKIDMIIAGMSPTAERK--QEIAFSSSYYTSEPVLLVKKDSAYANAKSLDDFN 115

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
                 +   + L D     +            ++  A  A   DAY  +       +  
Sbjct: 116 GAKIT-SQQGVYLYDLISQISGAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAA 174

Query: 208 NDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           N +     + P   +      +A  + + DT    I      A +           ++++
Sbjct: 175 NSKFKMVQVEPGFKTGEEDTAIAIGLRKDDTRISQI-----NASIETISKDEQVALMDRM 229

Query: 265 SKDTT 269
            K+  
Sbjct: 230 IKEQP 234


>gi|189439190|ref|YP_001954271.1| amino acid ABC transporter/signal transduction systems periplasmic
           protein [Bifidobacterium longum DJO10A]
 gi|189427625|gb|ACD97773.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Bifidobacterium longum DJO10A]
          Length = 308

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 88/282 (31%), Gaps = 25/282 (8%)

Query: 1   MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKRG-----FLKCGINTGLVGFAEV 50
           M + F   ++      F      S       +      G      +  G+          
Sbjct: 19  MRRGFRSRLMAGFAAAFGVILPLSGLAGCGQIQVTTVSGAPEGPTIAIGVAADEPSVGAW 78

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G ++GFD+   + +++ +     +I +  +  + R   L + Q+D++  +   T   
Sbjct: 79  -HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDNGQVDMVVASWPITD-- 135

Query: 111 EISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYF 164
           E S  + F         G ++             SV  +   ++C   G  T       F
Sbjct: 136 ESSAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTVCAVKGDETVGI----F 191

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +          +   A +    DA   D++ L  L        +++ +     + 
Sbjct: 192 RGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGL--QAANGPQYMDVIADKGEV 249

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               A+ QG ++    ++     MV        +      +K
Sbjct: 250 GYGIAVSQGTSQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 291


>gi|296160745|ref|ZP_06843559.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295889048|gb|EFG68852.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 286

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 32/275 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +   LI     + +  A+ +   K    +   +  G   +      G   GF+
Sbjct: 1   MKVKRTTAAKALIGAVIGAAAIFAAPVQA-KDWKTVTIALEGGYAPWNLTLPGGKLGGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L   I     +   +  +       LQ+ + D+L      T  RE  +  +   
Sbjct: 60  PELVANLCERI---KLQCNLVAQDWDGMIPGLQAGKFDVLMDAISITPEREKIIAFSKPY 116

Query: 121 ITYFDGQGFIMHKKKGISSV----------------------SQLSGASICVQAGTTTEL 158
                       K    ++                        QL G +I +Q+GT    
Sbjct: 117 AATPATFAIADAKILPKAAPGAGVVKLTGDPKTDQPTVDALRKQLKGKTIGIQSGTVYTK 176

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHV 215
            + D FK         V++   E D      R DA   D++   A     +         
Sbjct: 177 FINDGFK---DIATIRVYKTSPERDLDLANGRIDASFDDVTYYAANIDKKETASIVMAGP 233

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +   I       A  + D +          A + 
Sbjct: 234 KIGGPIWGPGEGLAFRKQDADLKAKFDTAISAALA 268


>gi|71280134|ref|YP_270342.1| putative transglycosylase [Colwellia psychrerythraea 34H]
 gi|71145874|gb|AAZ26347.1| transglycosylase, SLT family [Colwellia psychrerythraea 34H]
          Length = 518

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 79/235 (33%), Gaps = 12/235 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              + I   ++L       ++S L  I  RG++  G   G            + GF+ + 
Sbjct: 23  SLLLVIFTTVLLSACDKENDSSSLSRILARGYINVGTIFG--PTNYYTTANGFAGFEYEL 80

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +  + ++  +   +    L+       L + ++D+L+     T  R       F P   
Sbjct: 81  AKQYADSLNVELRIVPTYSLDELFIK--LNTGEVDLLASGLSITDKR--LQRFRFAPSYE 136

Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEE 181
              Q  +  +       V+ L+G ++ V +G++    L    + ++   +        EE
Sbjct: 137 TISQKLVFKQGNVRPRKVADLTG-TLMVTSGSSYVENLEKLKQTNSELAWQESTEFDSEE 195

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +     +   D    D + L   +      S    + +     PLA  + +   +
Sbjct: 196 LLRKVLSGEIDYTIIDSNNLAINRRYYPEISIGFSINEP---EPLAWMVSENSHD 247


>gi|325062904|gb|ADY66594.1| putative cystine-binding periplasmic protein [Agrobacterium sp.
           H13-3]
          Length = 311

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 14/184 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L   +  G    A          G D D+  A++ ++     +++ + +   +  L L
Sbjct: 62  GKLTVAVAPGGPPLATYATDAKTVVGADPDYALAVADSLG---LELELVAVAWADWPLGL 118

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASIC 149
            S + D +  N   T  R+      F         GF +        I+     +G  I 
Sbjct: 119 ASGKYDAVISNVGVTEQRKE--KFDFS-TYRQGLHGFFVKSDSGITAINEPKDAAGLKII 175

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L  +   +            ++       A  A R D      + L  + 
Sbjct: 176 VGAGTNQERILLKWNDENVAAGLKPLELQYYDDEATRLVALSAGRADVIVQPHAQLVFIA 235

Query: 206 LTND 209
             + 
Sbjct: 236 ARDK 239


>gi|326317702|ref|YP_004235374.1| family 3 extracellular solute-binding protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374538|gb|ADX46807.1| extracellular solute-binding protein family 3 [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 274

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 14/223 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLP 82
             +   ++ RG ++  I     G            G D+D  R  +  +     ++ Y+ 
Sbjct: 35  GPVAERVQARGTVRVCIWPSYQGVTYRDPRTRALSGMDIDLSRHFARELG---VQVDYVD 91

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SS 139
            +       L  ++ DI        L R     L F           +  K   +    S
Sbjct: 92  SSMDSIVGDLVDERCDIAMFALGILLPRLR--QLQFSQPYLRSSVLAVTTKGSSVVRQWS 149

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                G ++ VQ+G   +      F+        +     +  +    + R DA+    S
Sbjct: 150 DLDRPGIAVAVQSGAAIQSQAEQQFR----HARIVPVRLPDTRERELLSGRVDAFMTT-S 204

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                        + V  P      P   A+  GD EW   V 
Sbjct: 205 VYARQLALRAEWVQIVAPPSPSFTVPAGYAVRPGDAEWLATVD 247


>gi|220916906|ref|YP_002492210.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954760|gb|ACL65144.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 540

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 12/203 (5%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G +     +  +  +G   GF+V+  RA++        +++       E   AL + +I
Sbjct: 2   VGGDRDYPPYEFLDRDGKPAGFNVELTRAIAEVTG---MRVEIRLGAWSEMRAALAAGRI 58

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTT 156
           D L +   W+  R     + F P            K    ++S+  L G ++ V      
Sbjct: 59  DAL-QGMSWSEQRAA--EVDFSPPHLVVNHAIFARKGTPAVASLEALRGHAVAVHR---- 111

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +  + D      M    +  +   +      + + + Y    +      +   + +    
Sbjct: 112 DGIMDDQLTTLGMGDRLLRTDTPADALRLLASGKGE-YAVVAALPGTFIIRELKLTNLDP 170

Query: 217 LPDIISKSPLAPAIIQGDTEWYN 239
           +   ++      A+ +GD    +
Sbjct: 171 VAHSVASQRYGYAVRKGDAALRS 193


>gi|221198893|ref|ZP_03571938.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
 gi|221205153|ref|ZP_03578169.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221174944|gb|EEE07375.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221181344|gb|EEE13746.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
          Length = 485

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 227 QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 283

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + DIL      T  RE    L F          F +                 
Sbjct: 284 IPGLQAGKFDILMDAISITPDREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPIVK 341

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 342 LTGDANADKPTVDALRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 398

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 399 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 458

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 459 DTAIGAALA 467


>gi|146328869|ref|YP_001208971.1| extracellular solute-binding family protein [Dichelobacter nodosus
           VCS1703A]
 gi|146232339|gb|ABQ13317.1| bacterial extracellular solute-binding family protein
           [Dichelobacter nodosus VCS1703A]
          Length = 242

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 29/247 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++L   +  F+                  + G       F  +  N    GFD
Sbjct: 1   MKKLLLTALLSCSLPCFS---------------ETYQVGTYPFFAPFEFLDENSAMTGFD 45

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  R ++     +   +++   + K     L   + D++      +  R      +   
Sbjct: 46  IELMREIAKDQGFE---VKFNSDHWKGIVEQLAEGKRDLVISTLSDSEKRRQFADFSKPY 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +               + S+  L  A    I  +  T +   L      +      I   
Sbjct: 103 LESDRFMLIYKKANLAVKSLEDLVNAGDLKIGAERDTASVDKLKQAGVKN-----IIEQA 157

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTE 236
              E   A      D Y     ++  +   ++  + +   LP+    + +A  + +G+ E
Sbjct: 158 SDFEGLKAVVRGDIDIYYSYEPSMSFILKRHENLAIYSSKLPEEPGNTIIA--VRKGNPE 215

Query: 237 WYNIVSW 243
               ++ 
Sbjct: 216 LLAKINR 222


>gi|269791751|ref|YP_003316655.1| methyl-accepting chemotaxis sensory transducer [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099386|gb|ACZ18373.1| methyl-accepting chemotaxis sensory transducer [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 556

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 73/218 (33%), Gaps = 18/218 (8%)

Query: 25  SILGDIKKRGFLKCGINTGLVG-FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             +  I++RG +  GI     G F   +     KG DVD   A++  +       +++ +
Sbjct: 321 PSVASIRQRGEVLMGIEADDFGKFHWWEGR-IPKGLDVDLGEAIAREL---AVPARWVAI 376

Query: 84  NAKERFLALQSKQID------ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
                     +               T  T L E    + F    +  GQ  ++ +  GI
Sbjct: 377 PWGNGERGTVTGTWTLGDFDGFHFLCTTVTKLPERLRHVTFSRCYFKSGQSVVVPRASGI 436

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            ++  L G  + V +G+T+E     + K        + F    +   A      DA   D
Sbjct: 437 RAIGDLKGRRVAVTSGSTSEAAARRHLKE----SKIVPFPTGVQEANALANGEVDAMVLD 492

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               +      +R  E   L   +S    A  + +G +
Sbjct: 493 RPVAWDH---LERHPEWTELGISLSVESFAVTMPKGTS 527


>gi|90413431|ref|ZP_01221423.1| hypothetical glycosylase [Photobacterium profundum 3TCK]
 gi|90325519|gb|EAS41996.1| hypothetical glycosylase [Photobacterium profundum 3TCK]
          Length = 480

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 90/279 (32%), Gaps = 28/279 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K F +++LC   L  TS +              L +I + G ++  ++  L GF  + 
Sbjct: 1   MLKRFVIALLCFNALISTSLALEVFPITNTKFTGDLTEISEHGVIRILVSADL-GFYYLD 59

Query: 52  ANGDWKGFDVDFCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             G  KG   +        +         +Q +P+N  +   ALQ+   DI++ N   T 
Sbjct: 60  -KGHPKGITSEMLLLFEQHVLNSTKQKLHLQIIPINRDQLLPALQAGVGDIVAANITITP 118

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-H 167
            R+     +   +   +        +  I+ +  LS  ++ ++A ++   ++    K   
Sbjct: 119 QRKKIADFSSPILKDINEIFITHIDENPITQLKDLSKKNVWIRASSSYYQSVNRINKKLA 178

Query: 168 NMKYHPIVFERVEEIDAAY------RAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                 +    +EE    Y      +         D        L  D    H   P I 
Sbjct: 179 KQGLETMYVHFIEETLQDYELLQMIQQKIIPMTVLDNHKAEFWDLVTDDLKMHTDFP-IR 237

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
               +  A  +   E   +V+         EE      N
Sbjct: 238 KGGAIGWAFRKESPELAELVNNFI------EENRYGTLN 270


>gi|154150325|ref|YP_001403943.1| multi-sensor signal transduction histidine kinase [Candidatus
           Methanoregula boonei 6A8]
 gi|153998877|gb|ABS55300.1| multi-sensor signal transduction histidine kinase [Methanoregula
           boonei 6A8]
          Length = 729

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 69/229 (30%), Gaps = 16/229 (6%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I +   +    +     F      G++ G   D+   L+     + +       N     
Sbjct: 61  IAQHPVVVVCPDPNYPPFEFYDQTGNYSGISADYLHLLAQKTGLNITDT--RQDNWSVCV 118

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASI 148
             +Q+ Q D+L            +  L +  P+              G+ S+    G ++
Sbjct: 119 SMIQANQSDLLGAVYT---SDLRTGYLNYTLPLYQPPLVIITTRNVTGMLSLDDFKGMTV 175

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               G T+     D  K             +          R DAY GD+    +  +  
Sbjct: 176 AAVNGYTSY----DLLKEKYPGIEVRTEPDIRTGLLDVSLGRTDAYLGDLP-TASWYIEQ 230

Query: 209 DRPSEHVILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
              S   +  + +   P    LA  +   + E  +I++    A +T EE
Sbjct: 231 GGLSNLRVAGEYVPPDPTQFQLAIGVRANEPELRDILNKAILA-ITPEE 278


>gi|239787729|emb|CAX84244.1| Sensor protein [uncultured bacterium]
          Length = 817

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 92/322 (28%), Gaps = 72/322 (22%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            ++ L+ ++       ++    +  +  L  G       FA V   G+  GF VD  +A+
Sbjct: 22  LVIVLLGVWGLCIRYGSAEYHAVAAQRVLVVGSELAFPPFAIVDRQGEADGFSVDLFKAV 81

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +      +++     +E   AL+  +ID L      +   E      F         
Sbjct: 82  AQVMG---FALRFRVGTWEEVRTALERGEIDALPL---VSYSEEREKVFDFTSPYTVAHA 135

Query: 128 GFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              + K +  +   ++L   +I V     T   L        +  H ++   + E     
Sbjct: 136 AMFIRKGERGVEDDTELGERTILVMQADATHDYLVR----RGLARHLLLVPTIPEALRLL 191

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + + DA                                                     
Sbjct: 192 ASGKGDAALLPR----------------------------------------------LT 205

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL-----GLTKDWTYRIIR 301
            ++TA EL +T    N V+         R  G        E L     GL+      I+R
Sbjct: 206 GLLTARELHLT----NIVTTGPRIEVHGRGFGFAVREGNSELLAQLNHGLS------IVR 255

Query: 302 HMGNYGEMFDRNLGNQSELKIP 323
             G Y  ++D+  G      I 
Sbjct: 256 ATGTYDRLYDKWFGLVDPRGIA 277


>gi|119718792|ref|YP_925757.1| extracellular solute-binding protein [Nocardioides sp. JS614]
 gi|119539453|gb|ABL84070.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nocardioides sp. JS614]
          Length = 297

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 10/227 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
                 +       L  + +   L  G +      +       + KGF+     A++  +
Sbjct: 41  AGSSAPADQCAKESLPLVSEHPMLTIGTDSPAYEPWFVDNDPTNGKGFESAVAYAVAEQL 100

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                ++ ++ +     + A   K+ D        T  R     + F    Y   Q  I 
Sbjct: 101 GFSADEVMWVKVPFNNSY-APGPKKFDFDINQISITPQRAEV--VDFSDGYYSAAQAVIT 157

Query: 132 HKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            KK G   +S++ L+G  +  Q GTT+   + D          P+VF+       A    
Sbjct: 158 LKKDGATPTSLADLAGLKLGAQTGTTSLTAIRDQI---QPDSDPLVFQNTNAAKQALLNG 214

Query: 190 RCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           + DA   D+  A Y   +     +          +        +G+ 
Sbjct: 215 QVDAIVADLPTAFYITAVEIPGSTLAGQFQFSGEQEQFGMLFEKGNP 261


>gi|308049009|ref|YP_003912575.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ferrimonas balearica DSM 9799]
 gi|307631199|gb|ADN75501.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Ferrimonas balearica DSM 9799]
          Length = 732

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 64/217 (29%), Gaps = 6/217 (2%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I++ G L+ G N   V F+   A+    G DV+    L+  I  D + I Y    + 
Sbjct: 477 LDAIRESGVLRVGYNPLQVPFSFYNADNRLVGLDVEMMNKLAGEIGVDLAFIPY---ASD 533

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
               AL   + D++      T  R   +G  F          F++   +     +     
Sbjct: 534 TVLDALNRGRFDVVISGLQMTTRRIQYVG--FTNPVLTLHYAFVVKDHRADEFATDEMVR 591

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
                   +                        +         R DA    + A  A  +
Sbjct: 592 RAGPLTVASVGDYSIIPLIEKRFSNIRFERIESDRQFFEDDGERWDALLISLEAGKAWTM 651

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                +      +I S  P+A  + + + E    ++ 
Sbjct: 652 LYPEYTTLYNRKEIKSF-PVAYVVAKENIELRLFLNS 687


>gi|270156973|ref|ZP_06185630.1| arginine-binding periplasmic protein [Legionella longbeachae
           D-4968]
 gi|289164608|ref|YP_003454746.1| arginine 3rd transport system periplasmic binding protein
           [Legionella longbeachae NSW150]
 gi|269988998|gb|EEZ95252.1| arginine-binding periplasmic protein [Legionella longbeachae
           D-4968]
 gi|288857781|emb|CBJ11625.1| arginine 3rd transport system periplasmic binding protein
           [Legionella longbeachae NSW150]
          Length = 239

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 61/216 (28%), Gaps = 13/216 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            L  G +T            + + GF++D    +   I    +   Y P+  +E   A+ 
Sbjct: 21  KLIIGTSTFNPPMEMRATKNNVFTGFEIDLLNEICHRI---KATCVYEPMTFEEIMKAVA 77

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + +ID+       T  R      +F           +      I   +  +G  I ++AG
Sbjct: 78  TGKIDLGIDGFFITQERLAY--YSFSLPYLQTQAQLLTTIDSNIDITNINTGKRIGIEAG 135

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  +  L   +         I +   + +      H  D    D     A    +  P  
Sbjct: 136 TVFKSILEQKYD----NIKVISYNNQQNMLRDLADHDIDLIMFDFIG--ASYWVHTNPDN 189

Query: 214 HVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAM 248
             ++   I                    ++    AM
Sbjct: 190 FKLVGKPIPFGMGYGIIANPNQEALLARINSALDAM 225


>gi|325525582|gb|EGD03371.1| ABC-type polar amino acid transport system periplasmic
           substrate-binding protein [Burkholderia sp. TJI49]
          Length = 280

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 84/260 (32%), Gaps = 18/260 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  +K  G L  G +     +A +   G   GFD +F R L+S +  DP    +L     
Sbjct: 30  LQTVK-PGTLLIGSDLTYPPYAYLDG-GKPAGFDAEFSRMLASHLKLDP---VFLDTRFP 84

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS--VSQLS 144
           +  L +++++ D+++     T   +    + F P     G   ++ K           L 
Sbjct: 85  DLILGMKARRFDVVASALYVTP--DRVKQVDFVP-YLKTGASLLVAKGSAYWPKAPQDLC 141

Query: 145 GASICVQAGTTTELTLA-----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           G  +    G +    L          A + +   + F    E  +A  +   D    D +
Sbjct: 142 GKRVGTIKGASWTPKLRAVSDGACKAAGHGEIAILEFPTSPEATSALMSKAVDVQIEDAA 201

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                          +    ++    +   + +GD    + +         + E G   K
Sbjct: 202 VAQG-IPKQTNGRIELSSTALLYPIVIGLGVTKGDGGLQHALEGALDDAKRSGEYGSLVK 260

Query: 260 NINQVSKDTTNPDVQRFLGI 279
                 ++ T  DV   LG 
Sbjct: 261 KYG--LQEPTQADVATALGT 278


>gi|302879078|ref|YP_003847642.1| diguanylate cyclase with PAS/PAC sensor [Gallionella
           capsiferriformans ES-2]
 gi|302581867|gb|ADL55878.1| diguanylate cyclase with PAS/PAC sensor [Gallionella
           capsiferriformans ES-2]
          Length = 1302

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 79/277 (28%), Gaps = 39/277 (14%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+++    +  +   G + G   D+ + L   +      +++  ++ K     L  
Sbjct: 355 VLRVGVDSDFAPYEWIDEQGHYVGMAADYMKLLEKKLG-----VRFEIIHGKSWDEILNM 409

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAG 153
            +   L          E S  L F           I   +   I ++  L+G  + V+ G
Sbjct: 410 AKRGELELLACANKTPERSQYLTFSEPYKSAFAVIIDSGQGNFIGNLQNLAGRRVAVENG 469

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 + +    H  K   I      E          DAY GD        +  +    
Sbjct: 470 ----YFMQELMAKHYPKIQLIPTTNTTEALKLVLNGAADAYVGDA-GTANYMIKKNGFLS 524

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
                     S  + A  +   E   I+                   I+ + K+ ++   
Sbjct: 525 LRFSGQTEYHSIHSVAATKSHPELATIIFKA----------------ISSIPKEESDAIF 568

Query: 274 QRFLGIDKSSNI--------GEALG----LTKDWTYR 298
            R+LG+              G   G    L   W YR
Sbjct: 569 NRWLGLKIEQGFKAETLIQYGAGAGLLFLLFGYWVYR 605


>gi|227873775|ref|ZP_03992004.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Oribacterium sinus F0268]
 gi|227840391|gb|EEJ50792.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Oribacterium sinus F0268]
          Length = 317

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 70/224 (31%), Gaps = 8/224 (3%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           +I K   +    + G   ++ +   G+W G D +  + + +        +      +   
Sbjct: 69  EITKGRTVHVATSGGGEPYSLIDDKGNWTGIDAEIWKEIGNRTGWTIDVM--QATGSGAT 126

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F  + +K+ D+ +         +           Y D Q  ++ +   I +   L    +
Sbjct: 127 FGQVDAKRADVAANCYAVNA--DRVQKYLVSVPYYGDAQCVVVKEDSAIKTFDDLKDKKV 184

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            V  G   + T+    +           E            R DA+    SA+Y  +  +
Sbjct: 185 GVLNGQAAQQTIERMGQEKGFTVTLYEGENGSAGYQDVLLGRLDAFASTDSAVYKWENAS 244

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDT--EWYNIVSWTHYAMVT 250
           +       L + +  + +A    + D      N V+     M+ 
Sbjct: 245 NNKLRF--LDERLYANDVAYYFAKTDEGKALRNEVNVVLSEMLE 286


>gi|271501473|ref|YP_003334499.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270345028|gb|ACZ77793.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 285

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 74/278 (26%), Gaps = 39/278 (14%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     S++ L ++  ++           K+   +          +      G   GF
Sbjct: 1   MKKSKLVQSVIALCVVSVSAVFCAG---AQAKEWRSVTIATEGSYEPWNLTLPGGKLGGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +    L   +     + + +  N       LQ+ + D++      T  R+    + F 
Sbjct: 58  EPELMTILCQRM---NIQCKLVVQNWDGMIAGLQAGKFDVMMDAIVITPERK--QVVDFS 112

Query: 120 PITYFDGQGFI------------------------MHKKKGISSVSQLSGASICVQAGTT 155
                    FI                          K       S L G +I + +GT 
Sbjct: 113 VPYASTPASFITVKGKLALPVEADKAMIKLTNDPEQIKPAIAGLRSALKGKTIGIASGTV 172

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--- 212
               +  YF+          +    +     +A R DA   D++   ++    +  +   
Sbjct: 173 YTPFIDTYFR---DVATVREYTASADAILDLQAGRIDAVFDDVTFANSILSKPENSNLTL 229

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               L   I     A    + D E            + 
Sbjct: 230 GGPQLAGPIWGEGEALGFRKSDPELKAKFDAAIKTALA 267


>gi|27381927|ref|NP_773456.1| hypothetical protein blr6816 [Bradyrhizobium japonicum USDA 110]
 gi|27355097|dbj|BAC52081.1| blr6816 [Bradyrhizobium japonicum USDA 110]
          Length = 278

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 63/195 (32%), Gaps = 14/195 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77
           + +   S L  IKK G L+  +  G   +         W G  +D    ++  +    +K
Sbjct: 25  ADTAPGSTLERIKKSGVLRIAVIAGQDPYFHKDLTTNQWSGACIDMANDIAGKLG---AK 81

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKG 136
           ++ L      + L LQ+++ID+           E SL + F           I  K    
Sbjct: 82  VETLESTWGNQILDLQAEKIDLAFA---VNPTPERSLVIDFSTPILVHSFTVITKKGFAK 138

Query: 137 ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + ++L+     I V  G+T E     Y          + F+   E   A    R D  
Sbjct: 139 PQTWAELNKPEVKIAVDIGSTHETIARRYCPKA----TILGFKERNEAILAVATGRADCN 194

Query: 195 TGDISALYALKLTND 209
                   A    N 
Sbjct: 195 ISLAVLSVATLKKNP 209


>gi|254497959|ref|ZP_05110723.1| arginine ABC transporter, periplasmic binding protein [Legionella
           drancourtii LLAP12]
 gi|254352853|gb|EET11624.1| arginine ABC transporter, periplasmic binding protein [Legionella
           drancourtii LLAP12]
          Length = 248

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 73/262 (27%), Gaps = 23/262 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +   ++ +CL    F +                L  G  +    F    +  +  GFD+
Sbjct: 4   IRRVLLASICLTSTVFAA------------DLPVLNIGTESFNPPFVMQGSKKEIYGFDI 51

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    L   +       QY  +       A+  K+ID+   +   T  R     + F   
Sbjct: 52  DMMNTLCKIM---QRTCQYHIMRFDTLIDAVARKEIDMAISSITITPERAKI--VNFSLP 106

Query: 122 TYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                  F+     K    +++ L+G  I ++ GT     L      +       ++  V
Sbjct: 107 YLPSYSRFVTKPSTKTEPFTLAFLNGKRIGLETGTIFPQQLDAMGVKN---PKLKMYASV 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +       +  D    D          +   +  +  P  +    L  A+   +T    
Sbjct: 164 SDQLTGLNKNEVDIILLDNPTATYWASNSSD-TFQLAGPAYMYGYGLGIAVNPSETSLLT 222

Query: 240 IVSWTHYAMVTAEELGITQKNI 261
            ++        + E        
Sbjct: 223 SLNQVLLQYQNSTEYKQNYDRY 244


>gi|304411288|ref|ZP_07392903.1| chorismate mutase [Shewanella baltica OS183]
 gi|307306571|ref|ZP_07586314.1| chorismate mutase [Shewanella baltica BA175]
 gi|304350481|gb|EFM14884.1| chorismate mutase [Shewanella baltica OS183]
 gi|306910862|gb|EFN41290.1| chorismate mutase [Shewanella baltica BA175]
          Length = 421

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 72/220 (32%), Gaps = 13/220 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I     L  G       F+  +A G  KG D+D    L+ ++        +LP +
Sbjct: 193 STLDKIIAEKILYVGTTGDYEPFSYFEA-GQIKGIDIDLANRLADSLGAQA---VFLPTS 248

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143
                  L S++ DI+       L R+     +   +        +  KK+   S++++ 
Sbjct: 249 WSNLITDLSSERFDIMMSGISKQLFRQRVGLQSDIYLEDGKTPISLCAKKERYDSLAKID 308

Query: 144 -SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T +  +    K         V      I     A+R D    D   + 
Sbjct: 309 KPDTRMIVNKGGTNQRFVDTNIKQAK----ITVHSSNVTIFQELIANRADVMITDR--VE 362

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
               T   P     +P+ ++ S  A  +   D  W   V 
Sbjct: 363 VQLQTKKHPELCSTMPNNLNYSAKAFLM-GRDPIWKEYVD 401


>gi|322418594|ref|YP_004197817.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter sp. M18]
 gi|320124981|gb|ADW12541.1| integral membrane sensor signal transduction histidine kinase
           [Geobacter sp. M18]
          Length = 603

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 13/236 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDV 61
           + F V++  L++L F      A   G       +     +     +  V  +G   GF+V
Sbjct: 24  RLFRVTVWALLLLCFFCAVAGADTRGRGGGGKVVVVVGGDFNYPPYEFVGRDGKPTGFNV 83

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +  RA++  +     K++           AL+   +DIL         +E +  + F   
Sbjct: 84  ELTRAIAEVMG---FKVEISLGPWDGMRRALEEGDVDILQG---MAFSQERTSEVDFSTP 137

Query: 122 TYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                Q   + +    I S+ ++ G  + V   +     + D+ K ++ K   I+ + + 
Sbjct: 138 HALLFQSIWIRRDDRRIKSIEEVRGKEVIVMKNS----IMHDFMKGYDPKAKLILTDTLA 193

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E        R D                      V + + I       A+ +G+ +
Sbjct: 194 EALRLLNQGRGDCALVSR-LTGKYLEKEMGLKRIVPVAEPIMTQAYGYAVKKGNAD 248


>gi|329298113|ref|ZP_08255449.1| family 3 extracellular solute-binding protein [Plautia stali
           symbiont]
          Length = 214

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 51/205 (24%), Gaps = 31/205 (15%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K  G LK         F +   +G   G++ D    L+         +          
Sbjct: 3   QAKDFGTLKFATEAAYPPFNQSTPSGKIVGYEPDMVAELAKRAGFKYEIVA---QKWSGL 59

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS------- 141
              L   + D +      T  RE    + F         GF+  K   + ++        
Sbjct: 60  IPGLADGKYDAVVDAVTVTPKREEV--VDFTHQYTVSVSGFVTLKGSAVDTLPGNGEVVQ 117

Query: 142 ----------------QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
                           +  G +I VQ  T     L  Y            ++   E  A 
Sbjct: 118 ATDEAGMNKAIDALKAKFKGKTIAVQVATIQADFLNKYL---GDVATIRTYQAGPETFAD 174

Query: 186 YRAHRCDAYTGDISALYALKLTNDR 210
               R DA     + L A    +  
Sbjct: 175 QLNGRVDAVMASRTNLNAYVKKHAD 199


>gi|320547899|ref|ZP_08042182.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
 gi|320447439|gb|EFW88199.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus equinus ATCC 9812]
          Length = 283

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 60/177 (33%), Gaps = 15/177 (8%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDW 56
           M  K    +++   + F  +  +N S      + G    +K   ++    F     N ++
Sbjct: 10  MKLKRLLTTVVFASVAFILAACSNQS------QSGGKTVVKIATDSDTAPFTFK-ENDNF 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           KG+D+D   A+         K++++          + + +  I + + ++   R      
Sbjct: 63  KGYDIDVINAIFKD--SKEYKVEFVTTAFDSILTGVDADRYQIAANDFNYNEERAK--KY 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            F              +     S+  LSG    V +G+     L ++ K +  K   
Sbjct: 119 LFSDPISHSNYAITSAEGTRYDSLDDLSGKKTEVISGSNYAQVLENWNKENPDKEPI 175


>gi|160936637|ref|ZP_02084004.1| hypothetical protein CLOBOL_01527 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440428|gb|EDP18173.1| hypothetical protein CLOBOL_01527 [Clostridium bolteae ATCC
           BAA-613]
          Length = 305

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 86/304 (28%), Gaps = 62/304 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKR--------------------------- 33
           M K   +    L     T+ S  A     + +                            
Sbjct: 1   MKKIALLLCAVLTAGALTACSGGADATTAVSQAAAQEAADKDGAGKDAAETPAAGAEEKS 60

Query: 34  ------------------GFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAI 71
                               +K G +   V F  +      +  + G ++D  +A+    
Sbjct: 61  DEAGENSADTATENPFSGKTVKVGCSATFVPFESIEMAADGSKTYVGMNIDIVKAVVEKN 120

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                +++++ +  K    A+Q+ QID  S     T  RE +  L F  I ++     + 
Sbjct: 121 GG---QVEFVDMPFKSLMAAIQAGQIDFCSGGMAPTAEREKT--LDFSEIFFYPRNAIVY 175

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
             +     +  L G  I    GT  +        A       +  +         ++ R 
Sbjct: 176 RAEDNYPDLDSLKGKKIAYVFGTNYQQVAESVEGA-----VTVGIQGSPACIEEVKSKRA 230

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DA   D +   A +   +     + L D +     A    +    +Y   + T   M+  
Sbjct: 231 DACIVDGAG--ATEFLKNNEGLKLSLMDKVDDDCFAIGFPKESP-YYETFNNTLKEMMEN 287

Query: 252 EELG 255
            EL 
Sbjct: 288 GELD 291


>gi|260904765|ref|ZP_05913087.1| ABC amino acid transporter, extracellular solute binding component
           [Brevibacterium linens BL2]
          Length = 293

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 77/257 (29%), Gaps = 14/257 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +  L L +       ++ S L      G +  G       ++  + +G+ +G  V+  + 
Sbjct: 13  ILALTLTLGACGGSDSDKSTLQKAIDDGKISVGFAGE-APYSF-EKDGELQGASVEMAKT 70

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +   +  D   ++ +          L + +   +S       L +     AF    +   
Sbjct: 71  IFKELGVD--DVEGVNTEFGSLIPGLNADRFGAISAGMSI--LPDRCEQAAFGNPEFMYT 126

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              +  K +     +        ++  T T    +DY K   +K   +     ++   A 
Sbjct: 127 TALMTKKGEQDGMKTIDDVKEKGLKLATMTGAIESDYAKDLGIKSQEV--GTPQDGMDAV 184

Query: 187 RAHRCD--AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNI 240
              R D  A TG      A    +            I   P     A      DTE  + 
Sbjct: 185 TTGRADVFALTGISLNWMAQNNKDADVEVSESFVQEIDGVPQIGAGATVFRTDDTELKDA 244

Query: 241 VSWTHYAMVTAEELGIT 257
            +     +V+ E+  + 
Sbjct: 245 WNKELDKIVSDEKKYLD 261


>gi|307941505|ref|ZP_07656860.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4]
 gi|307775113|gb|EFO34319.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4]
          Length = 281

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 83/261 (31%), Gaps = 26/261 (9%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL------GDIKKR-----GFLKCGINTGLVGFAEV 50
            K +   IL +  L  ++  + A  +        +  R       ++   +     F   
Sbjct: 8   IKLYLSLILTMFALLSSASFSTADTIPNFWDPKAVADRPANIPDKIQFLSSDEHPPFVFR 67

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G   GF +D  R+L   +    S      +   ++  AL  ++ D +          
Sbjct: 68  DPDGRLTGFHIDLARSLCEVL---ESSCSLRIVPFDKQISALNEEEGDAIISGLARNQ-- 122

Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           + +  + F          F++        +  Q +G ++ V+AG+  E     ++     
Sbjct: 123 KAAEKMDFTDAYLKLPARFVVRADESDDFNPQQPTGKTVSVEAGSRHEAFALRFWPTAK- 181

Query: 170 KYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVI----LPDIISKS 224
               + +E   +   + ++   D  +   +S  + L+               L       
Sbjct: 182 ---ILSYETAMKARESLKSGEADTHFGDGLSLSFWLRGQASENCCRFSGGPWLEPGFFNE 238

Query: 225 PLAPAIIQGDTEWYNIVSWTH 245
            L  A+ +GD E    +++  
Sbjct: 239 GLTIAVRKGDIERLEALNYAL 259


>gi|184153353|ref|YP_001841694.1| amino acid ABC transporter substrate binding and permease
           components [Lactobacillus reuteri JCM 1112]
 gi|183224697|dbj|BAG25214.1| amino acid ABC transporter substrate binding and permease
           components [Lactobacillus reuteri JCM 1112]
          Length = 443

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 74/214 (34%), Gaps = 15/214 (7%)

Query: 38  CGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            G++     +           + GF+V   +  +  +      +    ++     +AL++
Sbjct: 1   MGMSADYPPYEFTTKENGKTKYVGFEVSLAKQFAKDLGVK---LVIKNMDFDSLLVALET 57

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQA 152
            +ID +    + T  R+    + F    Y     F+++K  K  + +V   +G ++  Q 
Sbjct: 58  GKIDAIISGMNVTAERKK--SVDFSNTYYSGDSYFLINKGDKDKLVNVKSFNGKNVGAQN 115

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT     ++      N K       ++  +    ++H+ D    D +   A    N    
Sbjct: 116 GTLQSTLISKEMPKANGKG----LAKLSSLVIGLQSHKYDGILMDAATAKAYAANNSNLY 171

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                    +   +A A  +GDT   N  + T  
Sbjct: 172 AFNS-KLPNTAGGIAMAFPKGDTSLVNAANQTIK 204


>gi|266619129|ref|ZP_06112064.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium hathewayi DSM 13479]
 gi|288869358|gb|EFD01657.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Clostridium hathewayi DSM 13479]
          Length = 281

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 75/266 (28%), Gaps = 28/266 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASI---LGDIKKRGFLKCGINTGLVGFAE 49
           M +   V +  +  L   +  +        +      L  + +RG L+ G       F  
Sbjct: 1   MKRTVAVLLAVISALSLAACGSKTQVNNTGSGDTDNSLQTVLERGTLRAGAEGNWNPFVY 60

Query: 50  VK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN-AKERFLALQSKQIDILSRNTDWT 107
              A G+  G++V+    ++  +      +++   N        LQ+ + D++       
Sbjct: 61  NDLATGNLVGYEVEIVEEIAKRMGVK---VEWSIANQWDGVIAGLQANRYDVVFCGCTLA 117

Query: 108 LLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            L E +           D    +       I S   L G  +   A T     +A  + A
Sbjct: 118 NL-EAAPDCVGTIPYREDPIVLVTAEDNNEIKSWEDLKG-KLSANALTGDYGAIAKQYGA 175

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKS 224
                  +    +E+       HR D       A+             V         + 
Sbjct: 176 E------LTNASLEQAMELIVQHRVDCSVNSQIAINTYMAEKPDTPVKVAAKYEYPTPEE 229

Query: 225 PLAP-AIIQGDTEWYNIVSWTHYAMV 249
             +   I++        ++     M+
Sbjct: 230 AYSYGMILKSKVTLTEKINEILQEML 255


>gi|91791445|ref|YP_561096.1| GGDEF domain-containing protein [Shewanella denitrificans OS217]
 gi|91713447|gb|ABE53373.1| periplasmic sensor diguanylate cyclase/phosphodiesterase
           [Shewanella denitrificans OS217]
          Length = 941

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 10/225 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G++     ++ +  N    G  +D    +   +  D   +     + ++    L +K
Sbjct: 77  IRVGVDGNFPPYSFLDENNQPVGIAIDTLELIGKKL--DIEFVIDKQSSWRKVISNLDAK 134

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
           +ID++          E  +   F     +     I +K    I +   ++  +I +    
Sbjct: 135 KIDVI---LTMVRTPEREVNYLFTSPIVYKSLVIINNKDSSAIENRGDIASKTIALVKNY 191

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + + F +      P   + + E   A  A + DA     +    L+      +  
Sbjct: 192 HYVSKILNEFPS----VVPFYVDTMREALEAVEAKKADAAITFFAGANFLQQKYLFSNLE 247

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                  + +  A AI Q       I+      +   ++L I +K
Sbjct: 248 FAAFYERNSANDAIAIRQDQPMLAAIMQKGLDVLSADDKLKINEK 292


>gi|170744238|ref|YP_001772893.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168198512|gb|ACA20459.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 262

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 70/221 (31%), Gaps = 17/221 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++     G   F  V  +G   GF+VD   AL           + +          L++ 
Sbjct: 34  VRIATEGGNPPFNYV-EDGRPAGFEVDLAEALC---GQARLTCRIVTHQWDGIIRGLEAG 89

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAG 153
           + D +  +   T  R   +   F    Y     F+            + L G +I V A 
Sbjct: 90  EYDAIMASLAITEKRRGRIA--FSRPYYRIPSAFMARRDAPAPPLDPASLKGRAIGVAAR 147

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +     L     A        VF+ V++     R  R D   GD   L  +   +D  + 
Sbjct: 148 SRELAYLE----ARAPGADLRVFDSVKDAGYDLRLGRLDLVLGDKRELSEILALHDGAAC 203

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249
             ++ D+    PL        + +GD      +     A+V
Sbjct: 204 CRLVGDVPPGDPLLGEGVGIGLRKGDDALREALDEALAALV 244


>gi|312874740|ref|ZP_07734759.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311089485|gb|EFQ47910.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
          Length = 535

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 34/269 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M      F + IL L  +   SFS  + +    K+   LK G+      +          
Sbjct: 1   MKSKINTFMIMILLLCSIITVSFSHTSIVNAKTKEP--LKIGMEANYPPYNWTQNTDAHG 58

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +     ++            +L S +ID++     
Sbjct: 59  AVPIDGSKQFANGYDVQIAKIIGKKL---HRRVIVEKTVWDGLLPSLTSGKIDLIIAGMS 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD 162
            T  R     + F           I++     ++ ++L    GA +  Q GT     +  
Sbjct: 116 PTSERRK--AIDFSIPYRKSTFVLIVNNASNFATATKLTEFKGAKLTAQQGTLHYDLIKQ 173

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A               +  +  +   D Y  +     +    N       +      
Sbjct: 174 LVGAK----RLTAMRDFSVMRQSLASGTIDGYVAEDIEYQSYHRVNPNIVSINLSKMPHF 229

Query: 223 KSPL-----APAIIQGDTEWYNIVSWTHY 246
                    +  + +G+T+  N V+    
Sbjct: 230 HVNYNDSITSIGVKKGNTKLLNQVNQILK 258


>gi|150402210|ref|YP_001329504.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150033240|gb|ABR65353.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 248

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 87/253 (34%), Gaps = 20/253 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + IL   ++  +   +N+           L  GI         + A G   GF+
Sbjct: 1   MLKFKILLILTAFMILISGCISNSENAEK----ETLVVGITPECYPINYMDA-GIHSGFE 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +++   ++  +  +P    +          A+++ ++D        T  RE    + F  
Sbjct: 56  IEYITGIAEKMNMEPE---FRIYEFANLLHAVETNRVDCAISLITVTPEREEL--VVFSK 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    ++ K  GI +V      ++ V  GT  +          N ++    +    
Sbjct: 111 SYINTTSIQVVDKNTGIETVDNC---TVGVIKGTVQDGC--AMRLKENHEFILYKYRTTT 165

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++ A+   + +    D   +Y   +     +    + +      ++ A+ + +TE  + 
Sbjct: 166 ELERAFDQEKINVMIVDE--IYFEYVLYPENNNLTSIFECPFGENISIAVNKENTELLSD 223

Query: 241 VSWTHYAMVTAEE 253
           ++    A+   EE
Sbjct: 224 IN---NAITELEE 233


>gi|52840293|ref|YP_094092.1| arginine 3rd transport system periplasmic binding protein
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52627404|gb|AAU26145.1| arginine 3rd transport system periplasmic binding protein
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 247

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 64/214 (29%), Gaps = 14/214 (6%)

Query: 36  LKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           L  G  +    F           ++ GF+++    +   I    +K QY PL  ++    
Sbjct: 25  LTIGTLSYNPPFETQVNDSSKKNEFYGFEIELMDEICERI---NAKCQYKPLLFEQILAE 81

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S  I++   + + T  R  S    F          F++     I  +  L G +I + 
Sbjct: 82  INSGAINLGIGSINITPER--SERFLFSLPYKASYHQFLIPSNSNIKKIDDLKGKTIGIH 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+ T   L  YF   N       +E   ++       +  A   +     A    +  P
Sbjct: 140 LGSPTADYLKAYF---NNNIQFKYYETFMDLLNGLTDPQVSAIVTNSDQ--AQYWASSTP 194

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              ++                   E    ++   
Sbjct: 195 DCKLLGDSFPFGVGFGVVARLDQAELIEKINQAL 228


>gi|162448094|ref|YP_001621226.1| ABC transporter substrate-binding and permease [Acholeplasma
           laidlawii PG-8A]
 gi|161986201|gb|ABX81850.1| ABC-type transport system, substrate-binding and permease component
           [Acholeplasma laidlawii PG-8A]
          Length = 512

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 88/266 (33%), Gaps = 34/266 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---------- 50
           M K   + I+ ++     + +T A+     + +  L  G+      F             
Sbjct: 1   MKKLVTILIVLIMSTTLIACTTQANN----ETKKDLVVGLEAAYAPFNWTVTSVSDYAYP 56

Query: 51  --KANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                G +  G+DV   + L++ +      +    +       AL S +ID++      T
Sbjct: 57  ISNQPGSYVDGYDVQMSKELANIM---DRNLVIKAIEWDGLIPALNSGEIDVIIAGMSPT 113

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSV---SQLSGASICVQAGTTTELTLADYF 164
             R   L + F    Y      ++ K    +S    +  +G+ +  Q GT  +    D  
Sbjct: 114 SER--KLQINFSDEYYRSEIVMVVKKDSNYASASKLTDFNGSKVVAQRGTLYD----DLI 167

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPD 219
                  H    +    + A+   +  DA+  ++    ++  +N      +  +      
Sbjct: 168 PQIENVVHQTPLDAYSNLVASVMTNVSDAFVAELPVAESVVKSNPSLTIVKFEQGFGFTS 227

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTH 245
             S   ++  + + DTE  + ++   
Sbjct: 228 EESDITVSVGVRKSDTELLDEINSAL 253


>gi|154508315|ref|ZP_02043957.1| hypothetical protein ACTODO_00812 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797949|gb|EDN80369.1| hypothetical protein ACTODO_00812 [Actinomyces odontolyticus ATCC
           17982]
          Length = 287

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 9/205 (4%)

Query: 34  GFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L     +     +         +G++     AL+  +      +Q++           
Sbjct: 49  GKLTVATSDPAYSPWILDNDPASGEGYESAVIYALAEELGYTADNVQWVRATFDASITP- 107

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASIC 149
            +K  D+  +    T  R+    + F    Y      I           S++ L    I 
Sbjct: 108 GAKDWDLNIQQFSITDERK--NAVDFTSPYYTTTSAIITKAGTPAADAKSIADLKDVLIG 165

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTN 208
           VQAGTT++   +D+ ++  +     +F   ++   A +  R DA   D+  A Y +    
Sbjct: 166 VQAGTTSQQFASDHLES-GLSQKLQMFNSSDDTVLALQTGRVDAIVVDLPTAFYMVSAQI 224

Query: 209 DRPSEHVILPDIISKSPLAPAIIQG 233
           D         D          + +G
Sbjct: 225 DDGVIIGQFDDTTGGEEYGIVLPKG 249


>gi|254718489|ref|ZP_05180300.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. 83/13]
 gi|265983459|ref|ZP_06096194.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306838296|ref|ZP_07471142.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
 gi|264662051|gb|EEZ32312.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306406587|gb|EFM62820.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. NF 2653]
          Length = 280

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 78/270 (28%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 1   MKSCLLSLTISMCLFAPATHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 60

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
             +   G   G+++D  +AL   +       Q   +   E    +   Q D +     W 
Sbjct: 61  NRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--WE 117

Query: 108 LLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
                     F          F     K    S+        + V AGT  E  L +YF 
Sbjct: 118 PTDRNREKFTFTRSYMRLPARFATTNAKSFTESAAKATQDKPVGVIAGTAHEELLKNYFP 177

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPDI 220
                  P+ +   + + AA +  + D    D  +L A   + +       ++   L   
Sbjct: 178 QAK----PVPYPNRDAMLAALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQ 233

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              S L+ A+ + +    +  +    A+  
Sbjct: 234 YLGSGLSIAVTRQNAALASAFNNALQALQQ 263


>gi|146305870|ref|YP_001186335.1| multi-sensor hybrid histidine kinase [Pseudomonas mendocina ymp]
 gi|145574071|gb|ABP83603.1| multi-sensor hybrid histidine kinase [Pseudomonas mendocina ymp]
          Length = 1165

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 93/259 (35%), Gaps = 15/259 (5%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDW 56
           M +      V + C  +L   +   + +    + +   L  G+  TG   F  V  NG +
Sbjct: 1   MRRLIGWVLVLLCCSALLPAWALPLSKAEQAWLAQHPRLLVGVERTGWPPFDMV-ENGRY 59

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G   D+ R L   +      + Y   + ++   AL+  +IDIL  +   T  RE  +  
Sbjct: 60  QGISADYLRLLGERLGVQVDAVYYD--DWEQALAALRKGEIDIL-PSVARTPERESWMR- 115

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F               +  I  V+ L+G  + ++ G   +  L D           I  
Sbjct: 116 -FSDPYLISSSLIFSRPEVQIQRVADLAGKRVAIERGYVLQQRLRDEVP----DVLLIEA 170

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              EE   A  + R DAY GD+     L   ++  +  +     +S S +   + +   +
Sbjct: 171 LNTEEALRAVSSGRADAYLGDMIVASYLIRRHNLTNLELRGESGLSSSEIRFGVRRDLPQ 230

Query: 237 WYNIVSWTHYAMVTAEELG 255
              ++     A ++ EE  
Sbjct: 231 LVELLDRAL-ASLSGEERE 248


>gi|157376000|ref|YP_001474600.1| Signal transduction histidine kinase-like protein [Shewanella
           sediminis HAW-EB3]
 gi|157318374|gb|ABV37472.1| Signal transduction histidine kinase-like protein [Shewanella
           sediminis HAW-EB3]
          Length = 2213

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 11/221 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ GI+     F  +   G++ G   D+   ++  +  D   I    LN  +     QS 
Sbjct: 277 IRLGIDQNYPPFDFIGDRGNYSGISADYLALINERLGTDMRVIS--GLNWTDVIAGAQSG 334

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
            ID++S        +E S  L F          F+  K +  +++   L+   + +    
Sbjct: 335 DIDVIS---TIVETKERSAYLNFTRPYISFPTIFLTRKDQEPVNAFHDLNRGKLAMVKDF 391

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E    +    +  +  P       E   A    + DA   + +    L L  D  S  
Sbjct: 392 FYE----EMILKNYPEIEPYFVNSPLEAIRALDNGKVDAAIVNYAVANHLILKYDLTSIR 447

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           V     + ++  +  + +   E  ++++    A +  E+  
Sbjct: 448 VDAETQLERTFFSFGVRKDWPELLSVLNKVL-ASIDEEKHK 487



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 10/171 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           +     ++   +     F     NG  +GF +D+   ++         ++       E  
Sbjct: 517 VASNPVVRVSGDISWPPFNFK-RNGVTQGFSIDYMNLIAKKAGLSIEYVE--GPTWGEFL 573

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
           L ++   +D++  +   T  RE    L +      +    +  K     S+  L G ++ 
Sbjct: 574 LMMRDGSLDVML-DIVKTPEREKY--LLYTKPYADNPNAILSKKSMPYRSLEALFGKTVA 630

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           V  G   E  L+  +     +   +  E   +   A      DA  G+++ 
Sbjct: 631 VTKGFFYEEILSREYP----QIKILPLENTYQTMIAVSVGEADAALGEMAV 677



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 24/206 (11%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVKANGDWKGFD 60
            FF  +L L I      +              +K G   G   F   +  +   + +G +
Sbjct: 6   RFFSFLLLLCITSAFCNAE------------TIKVGFGYGKPPFVFASTPEGQSEPRGIE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R  + A+     ++ Y   +       L+   ID     T     +  S+  + + 
Sbjct: 54  VDIMRE-ALALRGHDLEVHYF--SNNNLVEQLRQGNID---AATTIPSEQNSSVYYSNQV 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERV 179
           I +++        +  +SS+ +L    +    G +    L   F+    + +     E  
Sbjct: 108 IYFWNYAVTQPEDRTTLSSIDELKSRKVLSWQGAS--KDLGKSFEQAIPQMNFYREVEDQ 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALK 205
            E    +   + D    D S      
Sbjct: 166 SEQVLLFLQKKADTLVIDWSIFSYWA 191


>gi|126653499|ref|ZP_01725592.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Bacillus sp. B14905]
 gi|126589777|gb|EAZ83911.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Bacillus sp. B14905]
          Length = 301

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 13/224 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANG 54
           M K+  F ++ + L  +   +              G     +K   +      + +  NG
Sbjct: 15  MKKNKIFQLAAIGLASVALLAGCNPGESADKNSDDGGEVRTIKVAYDQASKPISYIDDNG 74

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DV+  + +   +  D    +Y+   + +  + ++  +  +  +N  +T  R    
Sbjct: 75  NPTGYDVEVMKLV-DELLPDYQF-EYVGTTSDDLLIGVEQGKYQVGVKNAFFTQERTEKF 132

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYH 172
                 +        +  + +GI +++     G S+   A    + T+ D +   N    
Sbjct: 133 IFPKEFLGLSSAGLVLRKEDEGIKTLADFAKKGYSLAPIAANNAQYTIIDEYNTANPDNK 192

Query: 173 PIVFERVE---EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             +        ++       R D             L  D P  
Sbjct: 193 VKLQAGDAFTVDVVQWVNEGRVDGGVMIEGPFKQQVLAEDGPYN 236


>gi|307727656|ref|YP_003910869.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
 gi|307588181|gb|ADN61578.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1003]
          Length = 286

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 72/276 (26%), Gaps = 34/276 (12%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K    +   +  +   +    A      K    +   +  G   +      G   GF
Sbjct: 1   MKVKRTTAAKALIGAVLGAATIFAAP--AQAKDWKSVTIALEGGYAPWNLTLPGGKLGGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +    L   I     +   +  +       LQ+ + D+L      T  RE  +  +  
Sbjct: 59  EPELVANLCERI---KLQCNLVAQDWDGMIPGLQAGKFDVLMDAISITPEREKIIAFSKP 115

Query: 120 PITYFDGQGFIMHKKKGISSV----------------------SQLSGASICVQAGTTTE 157
                        K    ++                        QL G +I +Q+GT   
Sbjct: 116 YAATPATFAVADPKVLPKAAPGAGVVKLSGDPKTDQPTVDALRKQLKGKTIGIQSGTVYT 175

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEH 214
             + D FK         V++   E D      R DA   D++   A     +        
Sbjct: 176 KFINDGFK---DIATIRVYKTSPERDLDLANGRIDASFDDVTYYAASIDKKETSSIVMAG 232

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
             +   I       A  + D +          A + 
Sbjct: 233 PKIGGPIWGPGEGLAFRKQDADLKAKFDTAISAALA 268


>gi|221196185|ref|ZP_03569232.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           multivorans CGD2M]
 gi|221202859|ref|ZP_03575878.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           multivorans CGD2]
 gi|221176793|gb|EEE09221.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           multivorans CGD2]
 gi|221182739|gb|EEE15139.1| glutamate/aspartate periplasmic-binding protein [Burkholderia
           multivorans CGD2M]
          Length = 139

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 6/134 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M + F  + + L      +         L  IK  G +  GI    V F+         G
Sbjct: 1   MDRRFRWAAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  D    +   +  D       ++ +P+ ++ R   LQ+  ID    +T  TL R+   
Sbjct: 61  YSRDIAARIIDQLKADLSLPGLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120

Query: 115 GLAFRPITYFDGQG 128
             +     Y     
Sbjct: 121 AFSNSIFLYGICSA 134


>gi|197120398|ref|YP_002140825.1| substrate-binding histidine kinase [Geobacter bemidjiensis Bem]
 gi|197089758|gb|ACH41029.1| periplasmic substrate-binding histidine kinase [Geobacter
           bemidjiensis Bem]
          Length = 572

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 79/223 (35%), Gaps = 13/223 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G N+    +  +  NG+ +GF VD  RA++  +     +I+    +  +    L S
Sbjct: 31  VIVVGGNSNYPPYQFLDHNGEPRGFIVDLTRAIARVMG---MQIEIRLDDFGKILKELDS 87

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153
            ++DIL     ++  R       F        Q     K    + S+ +L G  + V +G
Sbjct: 88  GEVDIL-EGLSYSDARAR--EYDFSTPHSIIVQAIFARKGTPAVKSLEELKGKKVLVHSG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPS 212
                 L +     +     ++     +      A RCD A    + A+Y ++      +
Sbjct: 145 GGMHSYLLE----KHYDADLVLTGSPRDTLQQLAAGRCDYAVVALLPAMYIIR-EEKLSN 199

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +  ++  +     A+ +G+ E    ++     +    E  
Sbjct: 200 LVPVATNVAPQRYYCYAVKKGNAELVAQMNEGLSILKKTGEFN 242


>gi|330948009|ref|XP_003307033.1| hypothetical protein PTT_20354 [Pyrenophora teres f. teres 0-1]
 gi|311315151|gb|EFQ84860.1| hypothetical protein PTT_20354 [Pyrenophora teres f. teres 0-1]
          Length = 303

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 72/223 (32%), Gaps = 20/223 (8%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-----------NGDWKGFDVDFCRALSSAIFD 73
           SIL  I+ RG+LK G       F+               N  + G D+D  + LS+++  
Sbjct: 52  SILDKIQARGYLKVGTTGDYKPFSYKVTNRTTLPGAPAINTTYIGADIDLAQTLSNSLSL 111

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            P  I+++P         + +++ D+       TL R    G     I        +   
Sbjct: 112 -PHPIEFVPTIWANLTADITAQKFDVAMTGVSITLPR-AQKGFFSTAILRVGKAACVRCA 169

Query: 134 KKGISS---VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                S       +G  + V  G T E     + +A+  K   ++ +    +  A    +
Sbjct: 170 DLAKFSSLAAIDTAGVKVAVNPGGTNEA----FDRANLRKATIVLVQDNNAVYQAVIEGQ 225

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            D    DI  +      +      V      +   L   I + 
Sbjct: 226 ADVMISDIVEVELQVRLHPGTLCIVNPDQAFTFEELGYMIARD 268


>gi|163802132|ref|ZP_02196027.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio sp. AND4]
 gi|159173937|gb|EDP58747.1| amino acid ABC transporter, periplasmic amino acid-binding portion
           [Vibrio sp. AND4]
          Length = 253

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 82/233 (35%), Gaps = 20/233 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +    A  +        +K G++     F  VK +   +GF+VD    +      +  KI
Sbjct: 18  TTQAIADTVKT-----EVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NNYKI 68

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGI 137
           +Y+  +    F  L++ +ID +S     T  R+      F      DG    +      I
Sbjct: 69  EYVTASFSGLFGLLETGRIDTISNQITMTDARKA--RYLFADPYVVDGAQITVHKDNDSI 126

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             +  L+G ++ V  G+  E  L +Y K  + K +   ++   E D A    R DA+  D
Sbjct: 127 KKIEDLAGKTVAVNLGSNFEQLLRNYDK--DGKINIKTYDTGIEQDVAL--GRVDAFIMD 182

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAI--IQGDTEWYNIVSWTHYAM 248
              L AL L                +   A      +   +    V+    AM
Sbjct: 183 R--LSALALIKKTKLSLKPAGKTFEEIENAWPFIDDKKGRKLQAEVNKALAAM 233


>gi|310798692|gb|EFQ33585.1| bacterial extracellular solute-binding protein, family 3
           [Glomerella graminicola M1.001]
          Length = 291

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 76/252 (30%), Gaps = 19/252 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-----------DWKGFDVDFCR 65
             S++   S+L  I  RG++  G       F     N             + G D+D  +
Sbjct: 32  SLSYANTTSLLDTIVARGYINVGTTGDYKPFTYFVTNQTTLPNTTAINTTYIGADIDAAQ 91

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           +LS+A+   PS  + +          L + + DI       TL R  +   +        
Sbjct: 92  SLSNALGL-PSPPRLVATKWANITSDLTAGRFDIAMGGVSMTLARARTAFFSTAIQKVGK 150

Query: 126 GQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                       + ++     G  + V  G T E     + +A+      ++ E    + 
Sbjct: 151 TACIRCADSSKYTDLASLDQPGVKVAVNPGGTNEA----FDRANLKSATIVLVEDNNAVY 206

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A      DA   D+  +      +      V      +   L  A+ + D  W   V  
Sbjct: 207 QAVLDGTADAMISDLIEVELQVKLHKGELCIVNPGAPFNFEELGYAVPR-DIVWKQFVDA 265

Query: 244 THYAMVTAEELG 255
             +  + +    
Sbjct: 266 WVHVQLGSGAWN 277


>gi|293193926|ref|ZP_06609886.1| extracellular solute-binding protein, family 3 [Actinomyces
           odontolyticus F0309]
 gi|292819820|gb|EFF78827.1| extracellular solute-binding protein, family 3 [Actinomyces
           odontolyticus F0309]
          Length = 287

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 9/205 (4%)

Query: 34  GFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L     +     +         +G++     AL+  +      +Q++           
Sbjct: 49  GKLTVATSDPAYSPWILDNDPASGEGYESAVIYALAEELGYTADNVQWVRATFDASITP- 107

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASIC 149
            +K  D+  +    T  R+    + F    Y      I           S++ L    I 
Sbjct: 108 GAKDWDLNIQQFSITDERK--NAVDFTSPYYTTTSAIITKAGTPAADAKSIADLKDVLIG 165

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTN 208
           VQAGTT++   +D+ ++  +     +F   ++   A +  R DA   D+  A Y +    
Sbjct: 166 VQAGTTSQQFASDHLES-GLSQKLQMFNSSDDTVLALQTGRVDAIVVDLPTAFYMVSAQI 224

Query: 209 DRPSEHVILPDIISKSPLAPAIIQG 233
           D         D          + +G
Sbjct: 225 DDGVIIGQFDDTTGGEEYGIVLPKG 249


>gi|115360583|ref|YP_777720.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115285911|gb|ABI91386.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 383

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 125 QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 181

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 182 IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPMVK 239

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 240 LTGDANADKPTVDTLRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 296

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 297 DLVAGRIDASFDDVTYYAANNTKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 356

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 357 DTAIGAALA 365


>gi|282864438|ref|ZP_06273494.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
 gi|282560925|gb|EFB66471.1| extracellular solute-binding protein family 3 [Streptomyces sp.
           ACTE]
          Length = 312

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 19/223 (8%)

Query: 22  TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79
             A +L  +++  G L    + G    A  + +G    G DVDF  A++ A+    ++  
Sbjct: 57  AAARLLPAEVRASGTLDLATSVGAPPGAFYREDGRTLAGADVDFADAVARALGLKLNR-- 114

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
               +      AL S + D+ + N   T  R  +  + F      DGQGF +     +  
Sbjct: 115 -EVASFDAILPALGSGKYDVGTGNFGVTDERRKT--IDFV-TYINDGQGFAVRDDSDLKK 170

Query: 140 VS---QLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           V+   QL G ++   AGTT E TL         A    Y    +     +  + R  R D
Sbjct: 171 VTALAQLCGLTVATNAGTTFEATLEANKSVCADAGEKAYDVKTYTDQGALWISLRQGRSD 230

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
                 S +  L+    +      L +      +  A  +G  
Sbjct: 231 VVM---STINGLRYAVAQQEGLRFLGEFKRLD-VGFAFKKGTP 269


>gi|317496916|ref|ZP_07955246.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895928|gb|EFV18080.1| bacterial extracellular solute-binding protein, family 3
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 373

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 12/194 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++  I +  +     A    D K+   ++ G       F  V  NG  +G+  +  +A
Sbjct: 15  IFVILGIWMMLSVHCQAAETNNDEKQPQTIRVGSFEDT--FNYVDKNGVRRGYGYELMQA 72

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           LS        K +Y+  +    F  L++ +ID +  +  +T  R  +  + F      + 
Sbjct: 73  LS---GYTGWKFEYVKCDWSNCFDKLENGEID-IMGDISYTDER--AQKMLFSDEPMSEE 126

Query: 127 QGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +  +                + G  + V  GT  E+ L ++ K + +    +     +++
Sbjct: 127 KYILYADLSHTDIGTSDFKAMDGKRVGVLMGTEPEIMLTEWEKKNGIHTKHVNVNNDDDV 186

Query: 183 DAAYRAHRCDAYTG 196
           +     H  D +  
Sbjct: 187 EKKLANHEIDCFVS 200


>gi|313201006|ref|YP_004039664.1| family 3 extracellular solute-binding protein [Methylovorus sp.
           MP688]
 gi|312440322|gb|ADQ84428.1| extracellular solute-binding protein family 3 [Methylovorus sp.
           MP688]
          Length = 475

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 5/234 (2%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             + +  L+ L  ++   +            L    + G      V       GF+ D  
Sbjct: 1   MRIFLTILLALLCSACEQSGDSPAHRPLTKELIVVTHNG-PNTYYVDGENQNAGFEYDLV 59

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +     +  + S    +  N  +    L   Q    + +   T LR+  +  +       
Sbjct: 60  QMFMKDLGPEYSAKFLVVGNISQVIPTLVKGQAHFAAADLSITKLRQHLVKFSVPYQNTQ 119

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY-FKAHNMKYHPIVFERVEEID 183
               +   + K   +VS L G  I V AGT+    L +   +A  +++  +     +E+ 
Sbjct: 120 QKVIYNESQSKPPKTVSDLIGKRIAVPAGTSYAERLREMKERAPALQWEELKRASADELM 179

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                   D    D      LK      ++ + +        +A A  +    W
Sbjct: 180 EQVADGSLDFTVADSHLANMLKNYYPNLADGMSVGKP---EQVAWAFPKRGQAW 230


>gi|253998907|ref|YP_003050970.1| putative transglycosylase [Methylovorus sp. SIP3-4]
 gi|253985586|gb|ACT50443.1| extracellular solute-binding protein family 3 [Methylovorus sp.
           SIP3-4]
          Length = 475

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 5/234 (2%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             + +  L+ L  ++   +            L    + G      V       GF+ D  
Sbjct: 1   MRIFLTILLALLCSACEQSGDSPAHRPLTKELIVVTHNG-PNTYYVDGENQNAGFEYDLV 59

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +     +  + S    +  N  +    L   Q    + +   T LR+  +  +       
Sbjct: 60  QMFMKDLGPEYSAKFLVVGNISQVIPTLVKGQAHFAAADLSITKLRQHLVKFSVPYQNTQ 119

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY-FKAHNMKYHPIVFERVEEID 183
               +   + K   +VS L G  I V AGT+    L +   +A  +++  +     +E+ 
Sbjct: 120 QKVIYNESQSKPPKTVSDLIGKRIAVPAGTSYAERLREMKERAPALQWEELKRASADELM 179

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                   D    D      LK      ++ + +        +A A  +    W
Sbjct: 180 EQVADGSLDFTVADSHLANMLKNYYPNLADGMSVGKP---EQVAWAFPKRGQAW 230


>gi|15988294|pdb|1II5|A Chain A, Crystal Structure Of The Glur0 Ligand Binding Core Complex
           With L-Glutamate
          Length = 233

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 36  LKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           LK G+      F       +  + G  +D  RA++ +   +   ++   ++A     A+ 
Sbjct: 6   LKVGVVGN-PPFVFYGEGKNAAFTGISLDVWRAVAESQKWNSEYVRQNSISA--GITAVA 62

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQ 151
             ++DIL      T  R    G+ F    +  G G ++         SV  L    + V 
Sbjct: 63  EGELDILIGPISVTPERAAIEGITFTQPYFSSGIGLLIPGTATPLFRSVGDLKNKEVAVV 122

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             TT          A+  +        +       +  + +A   D  AL      N   
Sbjct: 123 RDTTAVDW------ANFYQADVRETNNLTAAITLLQKKQVEAVMFDRPALIYYTRQNPN- 175

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNI---VSWTHYAMVTAE 252
               +    +S  P    + +       I   +    Y+ V AE
Sbjct: 176 LNLEVTEIRVSLEPYGFVLKENSPLQKTINVEMLNLLYSRVIAE 219


>gi|116254673|ref|YP_770509.1| putative substrate-binding ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259321|emb|CAK10456.1| putative substrate-binding ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 311

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 60/185 (32%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     ++ G    A          G D D+  A++ ++      ++ +P+   +  L L
Sbjct: 62  GKFTIAVSPGGPPLATYATDAKTVVGADPDYAYAIADSLG---LTLEIVPVAWIDWPLGL 118

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS---GASIC 149
            S + D +  N   T  R+      F         GF +     ++S+ +     G  I 
Sbjct: 119 ASGKYDAVISNVGVTEQRKE--KFDFS-TYRQGLHGFFVKSDSPVTSIKEPKNAAGLRII 175

Query: 150 VQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V AGT  E  L  +      A         ++       A R+ R D      + L  + 
Sbjct: 176 VGAGTNQERILVKWSEEDVAAGLKPIELQYYDDEAASLLALRSGRADVIVQPHAQLVFIA 235

Query: 206 LTNDR 210
             +  
Sbjct: 236 TRDKN 240


>gi|54293001|ref|YP_125416.1| hypothetical protein lpl0037 [Legionella pneumophila str. Lens]
 gi|53752833|emb|CAH14267.1| hypothetical protein lpl0037 [Legionella pneumophila str. Lens]
          Length = 247

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 64/214 (29%), Gaps = 14/214 (6%)

Query: 36  LKCGINTGLVGFA----EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           L  G  +    F           ++ GF+++    +   I    +K QY PL  ++    
Sbjct: 25  LVIGTLSYNPPFEIQVNNPSKENEFYGFEIELMDEICERI---HAKCQYKPLLFEQILAE 81

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S  I++   + + T  R  S    F          F++     I  +  L G +I + 
Sbjct: 82  INSGAINLGIGSINITPER--SERFLFSLPYKSSYHQFLIPSNSNIKKIDDLKGKTIGIH 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+ T   L  YF   N       +E   ++       +  A   +     A    +  P
Sbjct: 140 LGSPTIDYLKVYF---NNNIQFKYYETFMDLLNGLTDPQVSAIVTNSDQ--AQYWASSNP 194

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              ++                   E    ++   
Sbjct: 195 DCKLLGDGFPFGIGFGVIARLDQAELIEKINQAL 228


>gi|307312881|ref|ZP_07592510.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|306899395|gb|EFN30028.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 175

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            +   + + +AS L DI  R  +  G++  +  F          G DVD  + L+  +  
Sbjct: 15  AITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGLDVDVAKLLAKDLGV 74

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
           +   ++ +P+  + R  +LQ+ ++D +  + 
Sbjct: 75  E---LELVPVTGQSRIPSLQTGKVDFVVASF 102


>gi|301630603|ref|XP_002944406.1| PREDICTED: c4-dicarboxylate transport transcriptional regulatory
           protein dctD-like [Xenopus (Silurana) tropicalis]
          Length = 612

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 11/170 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74
            +     L  I   G +        + F+ +   +G   G+  D   A+  A+  D    
Sbjct: 23  AAELTGTLKKINDSGTITLAHRDSSIPFSYIADGSGKPVGYSHDIQLAIVEALKKDLNKP 82

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K +Y  + ++ R   +Q+   DI   +T     R  +  + F    +  G   ++ K 
Sbjct: 83  DLKTKYNLVTSQTRIPLIQNGTADIECGSTTNNAER--AQQVDFTVNIFEIGTRLLVKKD 140

Query: 135 KGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           K  S                +T+ +   +     N     ++ E    + 
Sbjct: 141 KDASGQRWYCLCPEFAAGEPSTSRV---EMNTEKNTDLTVLIVEDDPHVL 187


>gi|254524977|ref|ZP_05137032.1| ABC transporter, substrate binding protein [Stenotrophomonas sp.
           SKA14]
 gi|219722568|gb|EED41093.1| ABC transporter, substrate binding protein [Stenotrophomonas sp.
           SKA14]
          Length = 324

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 30/279 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKR-----------GFLKCGINTGLVGFA-EVKANG 54
              + +  L   + +     L    +            G      + G +  A     + 
Sbjct: 38  AGTVAVASLAGANTAVLKGTLDPKAQALIPAGYRFVTPGTFTVATHPGQLPLADYGSDSK 97

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G + D  R ++ A+     K+  +P+   +  L L+S + D +  N   T  R+   
Sbjct: 98  EVVGIEPDIARLIADALG---LKLVIVPVAWADWPLGLESGKYDAVLSNVTVTEERKK-- 152

Query: 115 GLAFRPITYFDGQGFIMHKKKGIS---SVSQLSGASICVQAGTTTELTLADYFKAH-NMK 170
              F     +D  G        I      + ++G  + V A T  +  L  + + +    
Sbjct: 153 KFDFS-SYRYDLLGIYTRSDGPIRKIDKPADVAGLKVVVGAATNQDQILRQWDQQNIAAG 211

Query: 171 YHPIVFERVEEIDA---AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             P+ ++  ++      A    R D                D     V L      +  A
Sbjct: 212 LKPVEYQYFDDAVVGRLAVITGRAD--VSFEPNASGAYSARDGKVRRVGLFPGGWPNAAA 269

Query: 228 PAIIQGDTE-WYNIVSWTHYAMVTAEEL--GITQKNINQ 263
            ++         + V+      + +      + + N+ +
Sbjct: 270 ISVTTRKGSGLADAVTQALNTQIGSGTYAQALARWNVAE 308


>gi|159186074|ref|NP_356421.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159141208|gb|AAK89206.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 286

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 56/211 (26%), Gaps = 14/211 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASIL--GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K         +             +    + K G L    +  L   A     G  KG  
Sbjct: 16  KTLLAGAAVTLFAGAAVAQDCTPKISDDHLIKPGHLVMATSPTLPPMAYADQQGVLKGLR 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    ++  +   P    Y+          LQ  + D+++     T  R     + F  
Sbjct: 76  IELGYEIAKRLCLKPE---YISTEYATMVPGLQGGRWDMINAGLFVTAER---RKILFMI 129

Query: 121 ITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTE---LTLADYFKAHN-MKYHPI 174
                             I+ +  L+G ++    G   E     L + FK          
Sbjct: 130 PYENLAISISTAVGASDPITKIDDLAGKAVSTDIGGYAERKIKELNEDFKKRGLAPMTIN 189

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           +F+    +  A RA +  A           +
Sbjct: 190 LFDNYATVYQALRAGQVQAAVSIDPVAKQYQ 220


>gi|156972776|ref|YP_001443683.1| ABC amino acid transporter periplasmic component [Vibrio harveyi
           ATCC BAA-1116]
 gi|156524370|gb|ABU69456.1| hypothetical protein VIBHAR_00441 [Vibrio harveyi ATCC BAA-1116]
          Length = 248

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 11/171 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK +   +GF+VD    +      +  KI+Y+  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  V  L+G +
Sbjct: 74  FGLLETGRIDTISNQITMTDARKA--KYLFADPYVVDGAQITVRKGNDSIQGVEDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + V  G+  E  L  Y K  + K +   ++   E        R DA+  D 
Sbjct: 132 VAVNLGSNFEQLLRSYDK--DGKINIKTYDTGIE--HDVALGRADAFIMDR 178


>gi|52841359|ref|YP_095158.1| cystine/glutamine-binding periplasmic protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52628470|gb|AAU27211.1| cystine/glutamine-binding periplasmic protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 252

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 73/224 (32%), Gaps = 12/224 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I K G L          F     +    GFD D  + +   +     +I+Y   N  + F
Sbjct: 23  ILKPGKLLVATAYPDPPFDIEPGD----GFDGDLIKEICRILNLQLVQIKYEGENFNDIF 78

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGAS 147
           L L +K+ D++   T  T  R  S  + F        QG  ++ +    +SS   L+G  
Sbjct: 79  LGLANKKYDVVISGTTITPNR--SKQVLFSNPYLQFNQGIAVNTELKPNVSSFEDLTGLV 136

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
             +Q G T++    D  + +         +  +E       A +          +  L  
Sbjct: 137 AGIQKGNTSDEVAQDLLRKNILSDIKYYAYNEIELAIQDLSAGKIGLVIKLYPVISCLIR 196

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    +     +   L  A  + + +  + V+     +V 
Sbjct: 197 NYTN---LAVPLQAETHEKLGIAFAKDNFKLRDKVNIVLADLVQ 237


>gi|15988295|pdb|1IIT|A Chain A, Glur0 Ligand Binding Core Complex With L-Serine
 gi|15988296|pdb|1IIW|A Chain A, Glur0 Ligand Binding Core: Closed-Cleft Ligand-Free
           Structure
          Length = 232

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 36  LKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           LK G+      F       +  + G  +D  RA++ +   +   ++   ++A     A+ 
Sbjct: 6   LKVGVVGN-PPFVFYGEGKNAAFTGISLDVWRAVAESQKWNSEYVRQNSISA--GITAVA 62

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQ 151
             ++DIL      T  R    G+ F    +  G G ++         SV  L    + V 
Sbjct: 63  EGELDILIGPISVTPERAAIEGITFTQPYFSSGIGLLIPGTATPLFRSVGDLKNKEVAVV 122

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             TT          A+  +        +       +  + +A   D  AL      N   
Sbjct: 123 RDTTAVDW------ANFYQADVRETNNLTAAITLLQKKQVEAVMFDRPALIYYTRQNPN- 175

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNI---VSWTHYAMVTAE 252
               +    +S  P    + +       I   +    Y+ V AE
Sbjct: 176 LNLEVTEIRVSLEPYGFVLKENSPLQKTINVEMLNLLYSRVIAE 219


>gi|294101083|ref|YP_003552941.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616063|gb|ADE56217.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 520

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 66/246 (26%), Gaps = 20/246 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFD 60
           K     +  L I+F    S   +    + K G    G   G V +            G++
Sbjct: 2   KRLIRFLCALFIVFAACGSPLYATDKPVLKWG----GDTEGGVPYMFYDPFDMDRLIGYE 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +  +     ++          L+    D+     + T   +    + F  
Sbjct: 58  VEIIDAIADYLGMETE---FVQNGWDNLIPGLERHLYDVTLDGLEITPEHKEV--VNFSI 112

Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             Y       + K    I ++    G  +     +    TL +             +E  
Sbjct: 113 PYYATFLQIAVRKGTKDIETLEDCKGKVVGTLKQSYAYFTLVEA-----GIKDIRTYEDE 167

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                     R DA   D             P    + P +        A+ + D +  +
Sbjct: 168 INAFNDLENGRLDATLFDDPIGVYYAGF--NPEIVFVGPPVGRME-YGIAVRKEDKQLLS 224

Query: 240 IVSWTH 245
            ++   
Sbjct: 225 DINEAI 230


>gi|328472093|gb|EGF42970.1| putative glycosylase [Vibrio parahaemolyticus 10329]
          Length = 485

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 109/353 (30%), Gaps = 36/353 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +  + +           L  IK++  L+  ++  L GF  +   G  KG  
Sbjct: 1   MLFFLLSASVYALEISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTPKGIG 58

Query: 61  VDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +        +        +Q +PL   +   +L++   D++  N   T  R+  +  + 
Sbjct: 59  AELLAHFEKDLRKIKPKLNVQIIPLARDQLLPSLENGSGDLVVANLTITDARKQKVDFST 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKYHPIV 175
             ++  +           I+ + QLSG  I V+A ++   +   +        +    + 
Sbjct: 119 PILSGIEEWVITNKSTPTITKLEQLSGKEIWVRASSSYFESIQAVNKTLNKKGLPPIIVH 178

Query: 176 FERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           F        E+          A   D           D    H  +P   +   +A  + 
Sbjct: 179 FIEETLQDYELVGMLNNGYIKAIVLDSHKAKLWLNAMDDIKAHKKVPLRKNGD-IAWVMR 237

Query: 232 QGDTEWYNIVSW--------THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
           Q   +   +V+         T    V   +       +N+         +++       S
Sbjct: 238 QNSPQLKAVVNKFIQKSRSGTLLGNVIYSKYIDNTNWLNKALNPKKIAQLEKL--SALFS 295

Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEM-FDRNL-GNQSELKI-------PRGYN 327
             GE   L     Y +I  +  Y E  F+ NL G +  + I        R  N
Sbjct: 296 RYGEKYNLD----YLLIAAVA-YKESGFNNNLVGTRGAVGIMQVLPSTARDPN 343


>gi|77461371|ref|YP_350878.1| diguanylate cyclase/phosphodiesterase [Pseudomonas fluorescens
           Pf0-1]
 gi|77385374|gb|ABA76887.1| periplasmic sensor diguanylate cyclase/phosphodiesterase
           [Pseudomonas fluorescens Pf0-1]
          Length = 1248

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 79/254 (31%), Gaps = 17/254 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDWKGFD 60
             S+L L+ L   + + +A  L D ++        L+ G++     F        ++G  
Sbjct: 4   LASVLFLLPLMIWTATADALTLNDEERSWLAAHPDLRLGVDASWPPFEFRDDQSRYQGLA 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D+   +   +    + I+  P++        ++  ID+L          E    L+F  
Sbjct: 64  ADYIDVIRQRLAIKLTPIE--PVSWTVVLEQAKNGTIDLLPGIMS---TPERQSYLSFTR 118

Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    + H        +  L G  I V         L    + H+   + +    V
Sbjct: 119 PYLDFPIVILAHVGGPQPHKLEDLYGLKIAVVENYAPHELL----RTHHPDLNLVAMPNV 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                A      DA  GD+++             +V          LA  + + +     
Sbjct: 175 SSALQALATDEVDAVVGDLASSVWSLRQLKLDGLYVSGETPYRYQ-LAMGVPRDNKMLVG 233

Query: 240 IVSWTHYAMVTAEE 253
           I+     A ++ EE
Sbjct: 234 ILDKVL-ADMSPEE 246


>gi|154250881|ref|YP_001411705.1| extracellular solute-binding protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154154831|gb|ABS62048.1| extracellular solute-binding protein family 3 [Parvibaculum
           lavamentivorans DS-1]
          Length = 319

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 65/240 (27%), Gaps = 17/240 (7%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            R  L          F      G   GFD++   AL   +  D     +   + ++   A
Sbjct: 81  ARRSLVLLTEGDYRPFNYRDETGALSGFDIELAAALCLRLDAD---CHFETRSWEQLIPA 137

Query: 92  LQSKQIDILSRNTDW----TLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSG 145
           L+  + + +  +                L F    Y     F   K      ++ + L+G
Sbjct: 138 LKRGEGNAVIASLLIPVPGRQSYPAEESLIFTQSYYSTPGRFAARKDDAPVAATPAALAG 197

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             I VQAG+  E      F +         F   E+ + A      D    D + L    
Sbjct: 198 KEIAVQAGSVHEAFARSRFASA----RLRTFATPEDAEKALAEGSVDLLFADRNELLLWT 253

Query: 206 LTNDRPSEHVILPD----IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
                    ++  D    +        A+   D    + +     A+V            
Sbjct: 254 SGLSGACCRLVGSDYADAVFFGEGAGIALRAADVALRDEIDKALSALVADGTYARVSARY 313


>gi|329118855|ref|ZP_08247551.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465046|gb|EGF11335.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 284

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 62/206 (30%), Gaps = 9/206 (4%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDI 99
             G   F    A+    GF ++  +A+       P    ++P +       +   +  D+
Sbjct: 57  AEGFAPFVMSDADNRPSGFGIELVQAIGDKQGFRP---NFIPHSFSNMLQDVGKGKGADL 113

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
                  T  R+    + F    +    G ++     I+S+S + G +I   AGT  E  
Sbjct: 114 AIAAITVTEERKAI--VDFANPHFETSMGLLVPANSPITSLSGVKGKNIATVAGTVGETE 171

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           LA            I      E          D    D   L     T       VI   
Sbjct: 172 LAKLQAGDG---TIIHSPSAWEATRQVMRKEADGVFADFGPLNYYANTYKDQKLRVITDA 228

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTH 245
              K   A A+ +GD E    ++   
Sbjct: 229 DSPKDYYAIAVKKGDPELVKKINRGL 254


>gi|160941894|ref|ZP_02089221.1| hypothetical protein CLOBOL_06790 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435391|gb|EDP13158.1| hypothetical protein CLOBOL_06790 [Clostridium bolteae ATCC
           BAA-613]
          Length = 299

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 68/219 (31%), Gaps = 10/219 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   +  G       ++ V   G+W G + D    + +         Q   + +      
Sbjct: 58  ESRTVIVGTAGTGEPYSMVDDKGNWTGAEADLWAEIEARTGWTIEMKQVSDMASLFG--E 115

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + ++D+ +     T  R  +         Y D Q  I+       ++  L G +I V 
Sbjct: 116 LNTGRVDVAANCFAITEARLKTYIA--SDPIYADAQVIIVQPDSEYQTLDDLRGHTIGVT 173

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           AG   + T+ +     +  +  + +E            R D Y    +     K    + 
Sbjct: 174 AGQAAQTTVENMAP--DYDWKIVTYEDSNAGFQDCSLGRIDCYA--NTVTNIEKAEKAQN 229

Query: 212 SEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWTHYAM 248
            E  +L   +  + +       +  T   + V+     M
Sbjct: 230 LEFRMLDQKLFGNNVGWWFADTEEGTGLRDEVNVVLKEM 268


>gi|315640503|ref|ZP_07895611.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483707|gb|EFU74195.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 547

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 10/239 (4%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           + L     S   S     +++  +  G +             +  GF++D  + + S   
Sbjct: 24  MALLAFVISWQLSTTVHAQEKQVVIVGTSGQTKPMDYFNDKNELTGFEIDVLKEIESR-- 81

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIM 131
            D    Q+        F  L SK+ D++  N       +      F            I 
Sbjct: 82  SDTITFQFETAEFASLFAGLDSKKFDLVVNNLG--ESGDRRKKYLFSLYPYIVTHNVLIT 139

Query: 132 HKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ERVEEIDAAYRA 188
              +  + +V+ L G SI V   +     L  + K +      I +      +I     +
Sbjct: 140 KTDQPDNLTVADLKGKSIAVVPASPQSQFLEAWNKENPDDAVTIQYVDSDPSQIIRDVYS 199

Query: 189 HRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSWTH 245
            + DA     + ++ ++ T   +  +H I  +   + P +     + +    N +    
Sbjct: 200 GKFDATIYATTYVHDVEQTFGIQLKQHTIENEDQIRQPGSYFIFRKDELTLRNEMDEIL 258


>gi|296534278|ref|ZP_06896756.1| amino acid uptake ABC superfamily ATP binding cassette transporter
           solute-binding protein [Roseomonas cervicalis ATCC
           49957]
 gi|296265394|gb|EFH11541.1| amino acid uptake ABC superfamily ATP binding cassette transporter
           solute-binding protein [Roseomonas cervicalis ATCC
           49957]
          Length = 281

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 81/256 (31%), Gaps = 15/256 (5%)

Query: 2   YKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           +K    + L L +     S + NAS+   ++  G L+ GI       A       + +G 
Sbjct: 4   FKRILAAGLALALAGTAPSLAQNASLPDSVRSAGVLRVGIEATYPPMAYKDPATNERRGV 63

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +VD   A++  +     +I++  ++ ++   +L + +ID     T  T L      L+F 
Sbjct: 64  NVDLVTAIARDLG---MEIRWEEMSFEQIINSLTTGRIDF--SGTSMTDLPARREKLSFV 118

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADY-----FKAHNMKYHP 173
                 GQ F        I   +   G S+     T    +   +       A       
Sbjct: 119 DYITTGGQLFTTRALAASIREATDFCGKSVSTPRFTNYFPSAQAWSERACVGAGRPAMQV 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +            R  R          +    L    P     +   I+ +    A  + 
Sbjct: 179 MGSNGATASRTDLRQERTQGAILGAEFVA--HLQRTEPENWAAVGRPITDNLSGLAFPKE 236

Query: 234 DTEWYNIVSWTHYAMV 249
            T   + ++ +   ++
Sbjct: 237 ATALRDAIAASLQRLI 252


>gi|291562496|emb|CBL41312.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [butyrate-producing
           bacterium SS3/4]
          Length = 316

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 90/271 (33%), Gaps = 24/271 (8%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGD--WKGFDVDFCRALS 68
             +  +  + + + L +I +RG+++            +    +G+  + G DV+  + + 
Sbjct: 49  AGIIASETTGSNNRLNEILERGYIEIATEPYFAPNEFIDPTKSGEEAYTGSDVELAKYIG 108

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----GLAFRPITYF 124
            A+  +   ++  P++      ++ + + D+      +T  R  ++    G  F      
Sbjct: 109 EALGVE---VRLKPMDFTSVLGSITTGKYDLAISALAYTPARAETMNLSKGYYFGDEDPQ 165

Query: 125 DGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
              G ++ K+    I S   L+   +  Q G+  E  + +   A+             + 
Sbjct: 166 TAYGILVRKEDVDSIKSFDNLADKVVVAQNGSLQEQFVQEQIPAYK---KYNRVSSTNDG 222

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISK---SPLA--PAIIQGDTE 236
                  + D      +   A       P    VI+P++  K           I +G+  
Sbjct: 223 FLMVETGKGDVIV--AALRMARLYLESNPDSNLVIVPNLYFKVDPETQGTRIGIPKGEDA 280

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
             + ++     +V  +          + +K 
Sbjct: 281 LTDRINEIIDEVVEKDLYNQWYDEYTEYAKS 311


>gi|296167082|ref|ZP_06849493.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897572|gb|EFG77167.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 605

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 81/218 (37%), Gaps = 13/218 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G  +       +   G++ GFD    RA++  +     +++++  +       + 
Sbjct: 93  GVLTVGTLSDAPPNICINPTGEFSGFDNLLLRAIADKL---HLQLRFVSTDFSALLAQVA 149

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152
           S++ D+ S +   T  R  +  ++F     F     ++     I +  +L +G  I V  
Sbjct: 150 SRRFDVGSASVKATDQRRRT--VSFTNGYDFGFYSLVVPPGSPIHNFGELAAGQRIGVVQ 207

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           GT  E  + D          P+ +     + A+ +  + DA+    +   +  +    P 
Sbjct: 208 GTVEESYVVDTL-----HLQPVKYPGFTTLYASLKTRQIDAWVAPGTL-ASTVIRPGDP- 260

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              +       + +A A+ + +    + ++    A++ 
Sbjct: 261 AVTVANTFSPGNFVAYAVAKENQPLIDALNSGLDAVIA 298


>gi|119964102|ref|YP_949419.1| ABC transporter, solute binding protein [Arthrobacter aurescens
           TC1]
 gi|119950961|gb|ABM09872.1| putative ABC transporter, solute binding protein [Arthrobacter
           aurescens TC1]
          Length = 330

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 62/229 (27%), Gaps = 13/229 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             I K G L      G +  +     +    G +VD  + ++  +     ++     + +
Sbjct: 74  EAIAKDGKLTVATTAGSIPLSFHATDDKTPIGVEVDIAQLVADKLG---LELDLQVTSWE 130

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLS 144
              L  QS   + +  N      R       F         GF   K     I     +S
Sbjct: 131 NWPLKTQSGDFEAVFSNVGINAARVKL--FDFS-TYRAAYMGFEAKKSSTYDIKGSDDIS 187

Query: 145 GASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           G  I V +GT  E  L  + K              +    +   A  + R D       +
Sbjct: 188 GLKISVGSGTNQEKILLAWNKELEAKGKAPATLQYYSSDADTILALSSGRTDLNLAPYPS 247

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           +   + T D       +        L  A           ++    + +
Sbjct: 248 VTYRENTRDDLKVVGKVNAGWPAETLVAATTLKGNGLAPAITDALNSTI 296


>gi|144897686|emb|CAM74550.1| Bacterial extracellular solute-binding protein, family 3
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 247

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 77/246 (31%), Gaps = 22/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F +I+ L      +                +   +      F+  + +G   G +
Sbjct: 1   MRRVKFAAIIWLFSAMPVAAED-------------VIVALTDSTPNFSMHQPDGSITGIN 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  R L   +     + +Y  +        ++  +  I   N   T  RE  +   F  
Sbjct: 48  MDLARLLCQRL---ELRCRYQLMPLAALVAHVRDGKAQIGFGNLTKTPEREKDM--LFSR 102

Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +     F+ H+     S+  L  G  + VQ G+     LAD    +   Y P+    +
Sbjct: 103 PYWRSTSVFVGHRDLAGHSMDDLVRGRKVAVQEGSRQAKWLAD---KYGGSYIPVPRPTI 159

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++ A     +       +  ++   ++ D      +   I S  P+   + +   +   
Sbjct: 160 FDVIATLPLQQAHLILAPMMTVHPFLISADGTDFGFVSDPIDSGWPVHIVLNKDRPDLQQ 219

Query: 240 IVSWTH 245
            +    
Sbjct: 220 RLDKAL 225


>gi|270284195|ref|ZP_05965716.2| putative glutamate-binding protein of ABC transporter system
           [Bifidobacterium gallicum DSM 20093]
 gi|270277296|gb|EFA23150.1| putative glutamate-binding protein of ABC transporter system
           [Bifidobacterium gallicum DSM 20093]
          Length = 283

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 67/233 (28%), Gaps = 12/233 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  GI           A+G + GFDVD  R ++  +    S+I +  +        LQ 
Sbjct: 32  VLSIGIPVDEPYMGWY-ADGSFSGFDVDVARYVAQVLGYGSSQITFHAVTPANAAAKLQD 90

Query: 95  KQIDILSRNTDW----TLLREISLGLAFRPITYFDGQGF--IMHKKKGISSVSQLSGASI 148
             + ++  +                ++           F  + +    ++   QL G S+
Sbjct: 91  GTVALVVGDQTVPAGDDQDDAQDPQVSVSQAYLRVPDAFLVVENGDHTLTRPDQLQGQSV 150

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           CV  GT     + +         H        +  +A       A  G    +  L    
Sbjct: 151 CVVTGTADRALVQETV----SDVHVSEQPSYPQCVSALLTGVVQAVAGSEPVIRGLAAQT 206

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
                  ++           A+     +  ++V      M+ + E     + +
Sbjct: 207 GDQYT-SVMDATFGSQGYGVAVAGDKAKMLSLVDDAIGQMIASGEWTRAMERL 258


>gi|119474732|ref|ZP_01615085.1| cyclohexadienyl dehydratase precursor [marine gamma proteobacterium
           HTCC2143]
 gi|119450935|gb|EAW32168.1| cyclohexadienyl dehydratase precursor [marine gamma proteobacterium
           HTCC2143]
          Length = 433

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 81/267 (30%), Gaps = 33/267 (12%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65
            S+  L  L         S L DI   G +  G       F+ +  + G + G D+D  R
Sbjct: 172 TSLGLLSALKTIRLEAPRSRLRDIIASGNIYVGTTGDYAPFSWLNKDTGSYSGIDIDLAR 231

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L+ ++     K+  +P +        + ++ DI        L R       F    +  
Sbjct: 232 DLAKSL---QVKLVLVPTSWPTLAQDFKGQKFDIAMSGVSINLKR--QQLGFFSQAYHRG 286

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA------DYFKAHNMKYHPIVFERV 179
           G+  I            LS  S+      TT   +        + + + +K    +F+  
Sbjct: 287 GKTPIARCSDS------LSYDSLEKINQPTTRAIVNPGGTNFKFAEKNLIKTTLRIFDDN 340

Query: 180 EEIDAAYRAHRCDAYTGDI--------------SALYALKLTNDRPSEHVILPDIISKSP 225
           + I      +R D    D                 +    LT       +  PD   K  
Sbjct: 341 QTIFEEIAENRADVMITDAIEVMLQSRQSALLCPTMPGQTLTVSEKGFWIQ-PDFHFKEY 399

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +   + Q   E        H+  +TAE
Sbjct: 400 VDQWLHQRKIEGVVKERIEHHLNITAE 426


>gi|94501914|ref|ZP_01308424.1| predicted soluble lytic transglycosylase fused to an ABC-type amino
           acid-binding protein [Oceanobacter sp. RED65]
 gi|94425967|gb|EAT10965.1| predicted soluble lytic transglycosylase fused to an ABC-type amino
           acid-binding protein [Oceanobacter sp. RED65]
          Length = 488

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 98/318 (30%), Gaps = 23/318 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F   L  + +     + N     DI +RG L+             +      GF+ +
Sbjct: 14  KASFALCLICVAVIMVLTTGNDHGYDDIMERGKLQIITRNS--PTTYFEDKDQAAGFEYE 71

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
                +  +  +      +    ++    + S  + + +     T  R+    ++F    
Sbjct: 72  MASMFADYLGVELEVK--VADTLEDLINEVASGNVALAAAGLTVTDERKKL--VSFADSY 127

Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE- 180
               Q  +         ++  L G+ + V + ++    L    + H  K   I  E  E 
Sbjct: 128 MSVTQKLVYRVGSQRPRNIEDLLGSKLVVTSHSSHAQYLRKLQRDHLPKLSWIEREDAEV 187

Query: 181 -EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--- 236
            E+         D    D + L ++       +    L +      LA A  +   +   
Sbjct: 188 VELVQMVENGEIDYTIVDSNELESIDNFYPNVASAFTLGEEQQ---LAWAFAKYSDQTLI 244

Query: 237 -----WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
                ++N +  T       E      K I+ V   T      + L   +   I  A  L
Sbjct: 245 AKAREFFNRIRETGDLSQLEERHYGHLKQIDNVGTLTFLQQADQRLPRYQDLFIKTAEEL 304

Query: 292 TKDWTYRIIRHMGNYGEM 309
            +DW  R++  +G Y E 
Sbjct: 305 EEDW--RLLAAIG-YQES 319


>gi|282851030|ref|ZP_06260404.1| conserved domain protein [Lactobacillus gasseri 224-1]
 gi|282557982|gb|EFB63570.1| conserved domain protein [Lactobacillus gasseri 224-1]
          Length = 120

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           +++I   +K+   +  G+      F  +    G  +GF+VD  +AL+  +    +K +++
Sbjct: 29  SSNIYEQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKNAKTEFV 88

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLR 110
               K R   L++  ID +      T  R
Sbjct: 89  QTTPKTRIPLLKNGNIDAILATMTITPDR 117


>gi|215275620|sp|A8ZWR8|MLTF_DESOH RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
          Length = 454

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 79/253 (31%), Gaps = 21/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M +      + L+ +              +   L  I++ G +           +     
Sbjct: 1   MRRPLRRVTVVLLWVALAIGVAWFYDYRRSMQSLWKIRQHGKIVVLTENNAN--SYYIYK 58

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GF+ D  +A +  +  D   ++         F +LQ    D ++ +   T  R+  
Sbjct: 59  ETPMGFEYDLAKAFAGHLGVD---LEVKTPGWDALFASLQRGDGDFIAASMTHT--RKRE 113

Query: 114 LGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F            +      I + + L+G ++ V+  TT +  L +  +A  +   
Sbjct: 114 QYADFSEPYLSVRQHLILHKSDHSIVTPAGLAGRTVHVREDTTYQQRL-EALQADGIDLQ 172

Query: 173 PIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
            ++       E+       + D    D +     +       +  I   I  + PLA A+
Sbjct: 173 LVLHRNTPTEELIEQVAKRQIDITVADSAIALLNRRYYP---DIRIAFPIEKEQPLAWAV 229

Query: 231 IQGDTEWYNIVSW 243
            +GD      ++ 
Sbjct: 230 RKGDRGLRTEINR 242


>gi|255505289|ref|ZP_05345237.3| amino acid ABC transporter [Bryantella formatexigens DSM 14469]
 gi|255268619|gb|EET61824.1| amino acid ABC transporter [Bryantella formatexigens DSM 14469]
          Length = 294

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 6/105 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I+ +G L  GI T          NGDW GFD D  + ++  +  +   ++++ ++   + 
Sbjct: 196 IQDKGSLIVGI-TDFAPMDYKDDNGDWIGFDADMAKLVAEKLGVE---VEFVEIDWDNKI 251

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           + L +K ID++      T   E+   +        + Q  ++  +
Sbjct: 252 MELDAKNIDVVWNGMTLTD--EVKSSMECTNAYCNNAQVIVVPAE 294


>gi|126433484|ref|YP_001069175.1| extracellular solute-binding protein [Mycobacterium sp. JLS]
 gi|126233284|gb|ABN96684.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 285

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 12/189 (6%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSA 70
           L+    +S     S          +  G +      + +   + +  GF+ D  + ++  
Sbjct: 24  LVSACSSSTPAENSGTEADPASREIVIGTSGDFPPVSFLEDGSTEVVGFENDLAKGVTDD 83

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +       ++  ++      ALQS +ID +      T  R     + F            
Sbjct: 84  LGW---TYRFEQISFDGLLPALQSGRIDAILSGMYNTEKR--REQVDFIDYMQIPLSVLT 138

Query: 131 M-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPIVFERVEEIDA 184
                        L G S+     +  E    D +             P  F  V +   
Sbjct: 139 TVDNAPKTPGPEALCGQSVAYLTASPPERAQLDAWSQQCTDSGKPPLQPTGFPSVAQGVN 198

Query: 185 AYRAHRCDA 193
           A    R  A
Sbjct: 199 AVATGRVYA 207


>gi|237731570|ref|ZP_04562051.1| extracellular solute-binding protein [Citrobacter sp. 30_2]
 gi|226907109|gb|EEH93027.1| extracellular solute-binding protein [Citrobacter sp. 30_2]
          Length = 310

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     I              N    G + D  R ++ ++  + + +     + ++  L 
Sbjct: 61  GKFTVAIAGLSQPPLTVFADDNKTLIGSEADIARLVADSLGLELNVVP---TSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +    K K I     ++G  I
Sbjct: 118 VTSGKYDAAISNITVTKARKE--KFDFA-TYRKDSLGFYVKTGSKLKKIEQAEDIAGLRI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A ++ R DAY G        
Sbjct: 175 IVGSGTNQEAILLAWNDENVKKGLQPFTPVYTKDDAAQTLALQSGRADAYFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
              N +      +     K+      ++ D+     +      ++   +         + 
Sbjct: 235 AALNGKTQLVGSVDGGWPKAAHIAVTLKKDSGLVLPIQTALNGVIGNGDYDKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +     ++ 
Sbjct: 295 VERIPQSEIN 304


>gi|291616397|ref|YP_003519139.1| FliY [Pantoea ananatis LMG 20103]
 gi|291151427|gb|ADD76011.1| FliY [Pantoea ananatis LMG 20103]
 gi|327392841|dbj|BAK10263.1| cystine-binding periplasmic protein precursor FliY [Pantoea
           ananatis AJ13355]
          Length = 271

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 72/262 (27%), Gaps = 21/262 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S+L    +  +  ++         + G +  G +     +  +  +    GFD
Sbjct: 1   MMKTCVLSLLAAGAVLASFNASA------FLQPGKIIAGSDMTFFPYEYM-KDNKPAGFD 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++F   L+  +      I             LQS + DI + +   T  R   + +    
Sbjct: 54  IEFLDGLAKVMGRQAVNID---TRFPNLITGLQSNRFDITNSSMYITADRMKVIDMI--- 107

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHP 173
                G+  +  K       +  +  G  I     T+    L         K        
Sbjct: 108 PYLKSGEAILSLKGSDYQPKTPEEFCGHKIGSMGATSWLQQLHKLSDDYCVKNGKPPIAI 167

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             +    +   A  +H  +A   D +    +        +      I         + + 
Sbjct: 168 SEYATDPQTTQAMLSHAVEAQITDAAVARGVVQKLGDRIQISSTTLIYPVL-NGFGVKKD 226

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
           +TE    +     A     E  
Sbjct: 227 NTEVKQALVAALEAYSKTPEYA 248


>gi|169830103|ref|YP_001700261.1| amino-acid ABC transporter extracellular-binding protein ytmK
           [Lysinibacillus sphaericus C3-41]
 gi|168994591|gb|ACA42131.1| Probable amino-acid ABC transporter extracellular-binding protein
           ytmK precursor [Lysinibacillus sphaericus C3-41]
          Length = 287

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 13/224 (5%)

Query: 1   MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANG 54
           M K+  +  +++ L  +   +   +          G     +K   +      + +  NG
Sbjct: 1   MKKNKILQFAMIGLASIALLAGCNSGESADKNADDGGKVRTVKVAYDQASKPISYIDDNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DV+  + +   +  D    +Y+   + +  + ++  +  +  +N  +T  R    
Sbjct: 61  NPTGYDVEVMKLV-DELLPDYKF-EYVGTTSDDLLIGVEQGKYQVGVKNAFFTQERTEKF 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYH 172
                 +        +  + +GI +++     G S+   A    + T+ D +   N    
Sbjct: 119 IFPKEFLGLSSAGLVLRKEDEGIKTLADFAKKGYSLAPIAANNAQYTIIDEYNTANPDNK 178

Query: 173 PIVFERVE---EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             +        ++       R D             L  D P  
Sbjct: 179 VKLQAGDAFTVDVVQWVNEGRVDGGVMIEGPFKQQVLAEDGPYN 222


>gi|119866938|ref|YP_936890.1| extracellular solute-binding protein [Mycobacterium sp. KMS]
 gi|119693027|gb|ABL90100.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 285

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 12/189 (6%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSA 70
           L+    +S     S          +  G +      + +   + +  GF+ D  + ++  
Sbjct: 24  LVSACSSSTPAENSGAEADPASREIVIGTSGDFPPVSFLEDGSTEVVGFENDLAKGVTDD 83

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +       ++  ++      ALQS +ID +      T  R     + F            
Sbjct: 84  LGW---TYRFEQISFDGLLPALQSGRIDAILSGMYNTEKR--REQVDFIDYMQIPLSVLT 138

Query: 131 M-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPIVFERVEEIDA 184
                        L G S+     +  E    D +             P  F  V +   
Sbjct: 139 TVDNAPKTPGPEALCGQSVAYLTASPPERAQLDAWSQQCTDSGKPPLQPTGFPSVAQGVN 198

Query: 185 AYRAHRCDA 193
           A    R  A
Sbjct: 199 AVATGRVYA 207


>gi|283851111|ref|ZP_06368395.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Desulfovibrio sp. FW1012B]
 gi|283573507|gb|EFC21483.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Desulfovibrio sp. FW1012B]
          Length = 278

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 76/256 (29%), Gaps = 17/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M +      + L++     +         +    +   G L+ G ++    ++   ++G 
Sbjct: 1   MRRILGYVAVTLLVAAAGLWGLLYVREGRNAPAPVWSGGALRIGYSSE-PPYSYRTSDGK 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G   +  +A+  A+    + ++++ L+      AL   Q+D+L+     T  R     
Sbjct: 60  VTGEAPEIAKAVFDAMGV--TAVRWVLLDFGRAIPALLDGQVDMLANGLFITPERSA--Q 115

Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           + F         G ++       + S   ++  +    A     +  A   +        
Sbjct: 116 VLFSLPFCQVRPGLLVRHGNPFSLFSYEDVAARAEVTAAVLDGSVEQAALVRLGKPAQRL 175

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALY----ALKLTNDRPSEHVILPDIISKSPLAPA 229
            V        +A  + R D        +           ++ +     PD   +   A A
Sbjct: 176 FVVPDPAAGLSAVGSGRADCLALSAPTVAWLAGETAGEVEQAAPFREPPDATIRES-AFA 234

Query: 230 IIQGDTEWYNIVSWTH 245
               D      V+   
Sbjct: 235 FRPQDRPLAEAVNAAL 250


>gi|223983007|ref|ZP_03633216.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM
           12042]
 gi|223965053|gb|EEF69356.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM
           12042]
          Length = 519

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 82/267 (30%), Gaps = 29/267 (10%)

Query: 1   MYKDFFVSILCLIILFFT-----------SFSTNASILGDIKKRGFLKCGINTGLVGFAE 49
           M     ++++   +   T           +    A+ L +I +RG L    +        
Sbjct: 4   MKNTLILAVMIFCLWITTGLSLAAEEEQPAQGNPANRLEEILQRGKLIVATSPDFAPQEF 63

Query: 50  VKANGD----WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           +  +      + G D+   + ++  +  +   ++   ++      ++   + D+      
Sbjct: 64  IDDSKKGQEQYVGSDILMAQYIADQLGVE---LEIQAMDFAMVLSSVDLGESDMAISGFG 120

Query: 106 WTLLREISLGLA--FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLA 161
           W   RE S  L+  F        QG ++ +        ++   G  I  QAG+  E  + 
Sbjct: 121 WKEDREDSFELSDGFNKTGEAACQGLMIRRADAEKYPDLASFDGKLIAAQAGSLQENYVQ 180

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                            ++    +   ++ DA   D          ++         D  
Sbjct: 181 TQLPQA----TLETITSMDIGILSLTTNKVDALASDCDVAKGYVSKDNSLILADARFDTT 236

Query: 222 SKSPLA---PAIIQGDTEWYNIVSWTH 245
            +   A    A+ +G+TE    ++   
Sbjct: 237 LEDQHAGNVLAVKKGETELIAAINNII 263


>gi|186682620|ref|YP_001865816.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
 gi|186465072|gb|ACC80873.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme
           PCC 73102]
          Length = 734

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 2/95 (2%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
            +     I        T         L  I+ RG+L   +   + GF       G++ G 
Sbjct: 444 RRSTLADITTGGSSSPTIGQPQPGTPLRRIQDRGYLVVAVKENVPGFGYRDPKTGEFSGL 503

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           ++D  R ++  IF DPSK++++ ++ ++R   L+S
Sbjct: 504 EIDLARLIAKQIFGDPSKVKFVAVSTQQRLPVLRS 538


>gi|149377565|ref|ZP_01895305.1| extracellular solute-binding protein, family 3 [Marinobacter
           algicola DG893]
 gi|149358178|gb|EDM46660.1| extracellular solute-binding protein, family 3 [Marinobacter
           algicola DG893]
          Length = 221

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           ++     F  V+ +   KGF+VD   A+   +  +   IQY   N    F  L+S +ID 
Sbjct: 1   MSGQYFPFTFVEQD-KLKGFEVDVMNAVGKEMGRE---IQYQTANFSGLFGMLESGRIDT 56

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTEL 158
           ++     T  R+      F     +DG   +  +    + SV  L G ++ V  G+  E 
Sbjct: 57  VANQITITEERQK--AYIFSEPYVYDGAQVVTKEGNTEVESVEDLKGKTVAVNLGSNFEA 114

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            L +   A   + +   +E   E D A    R DA+  D  +  A ++  ++P    +  
Sbjct: 115 LLRELPYA--DEINIKTYESNLERDTAL--GRVDAFVMDRVS--ASQIIKEKPLPLELAG 168

Query: 219 DIISKSPLAPAIIQGD--TEWYNIVSWTHY 246
              S+   A      +      + V+    
Sbjct: 169 PTFSQITNAYPFRNTEAGQALRDEVNAALT 198


>gi|120556594|ref|YP_960945.1| diguanylate cyclase [Marinobacter aquaeolei VT8]
 gi|120326443|gb|ABM20758.1| periplasmic/7TM domain sensor diguanylate cyclase [Marinobacter
           aquaeolei VT8]
          Length = 935

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 72/274 (26%), Gaps = 36/274 (13%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G ++ G       F+     G   G  VD    L+         ++       E    LQ
Sbjct: 247 GPVRVGFMDDYAPFSFTDG-GRTLGLSVDVMDRLADLTGLQIIPVRGQ---WDELIPMLQ 302

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152
           +  ID +  N  +   RE      F    +               + +  L    + + A
Sbjct: 303 NGDID-IMANMSYRPEREAFAR--FTEPYHTIPNVIFTRSDSLNYTRLEDLRNYRLAIGA 359

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP- 211
           G   E  + +     N     + F   E +  A      D     + +            
Sbjct: 360 GIYYEEAVKEILGTKN----LLTFSTQEPMFHALAKGDVDVVINALHSGNYWIHELGISG 415

Query: 212 --SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
                 ++    +   L   I    +   +I++    ++   E+  I             
Sbjct: 416 VRIAGELVLPGFTGEDLRFGIRPTLSPLADILNQALASISPTEQRTIET----------- 464

Query: 270 NPDVQRFLG-----IDKSSNIGEALGLTKDWTYR 298
                R+LG      D+S    E      DW  +
Sbjct: 465 -----RWLGATARRADQSGGRIEWNETEADWLQQ 493



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 81/290 (27%), Gaps = 40/290 (13%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G+      +   +      GF +D  R ++    +      +   +  + + A    
Sbjct: 2   ITIGVVADNEPYTFFEGR-TPTGFSIDVLREVAR---NANLTFDFRAGSWPDIYAAFLRG 57

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQA 152
            +D +      +   E +  + F    +F     +         I +++ L G  I V  
Sbjct: 58  DLDAIDG---ISWRPERAEKILFTEPYHFREVYLMRDSARYLPPIQNLTDLEGLRIGVVE 114

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
                  L D             ++ +  +  A      D   G    +  L        
Sbjct: 115 NIYYLDRLQD------EDLTIQTYDTLPSLVRALAFGWVDVAVGPRLTMEYLANRAGFRF 168

Query: 213 EHVILP---DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA----------EELGITQK 259
             +  P   D +S+      +  GD    + +     A+  +          E  G++ +
Sbjct: 169 LEMAGPAPLDQLSREDFRLGVRMGDQALLDRLQAGLDAIPASRLSNLRERWQEFGGVSTE 228

Query: 260 NINQVSKDTTNPDVQRFLGIDKSS-----------NIGEALGLTKDWTYR 298
              ++   +        LG  +             + G  LGL+ D   R
Sbjct: 229 RSARLPLSSEQLQFLATLGPVRVGFMDDYAPFSFTDGGRTLGLSVDVMDR 278


>gi|229553603|ref|ZP_04442328.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus rhamnosus LMS2-1]
 gi|229313023|gb|EEN78996.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Lactobacillus rhamnosus LMS2-1]
          Length = 125

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAE 49
           M K    F + ++ L+    T+ ++ +S            I K   L  G+      F+ 
Sbjct: 1   MLKKKLWFLLPLVALVTFTLTACTSASSDTSKNSDVTAELINKN-ELTIGLEGTYAPFSY 59

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G  +GF+V+  +AL+  I       +++P         L S++ D++  +   T  
Sbjct: 60  R-KDGKLEGFEVELGKALAKKIGVKA---KFVPTQWDSLIAGLGSQKFDLVLNDISETPA 115

Query: 110 REISLGLA 117
           R+      
Sbjct: 116 RKKVYNFT 123


>gi|227326273|ref|ZP_03830297.1| ABC transporter, substrate binding protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 311

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 65/182 (35%), Gaps = 15/182 (8%)

Query: 34  GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   ++       + +   N    G D D  R ++  +     +++ +P + ++  L 
Sbjct: 66  GKLTIAVSALSSPPLSLLADDNKTLIGSDADIARLVADGLG---LELKLVPASWEDWPLG 122

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + + + D    N   T LR+      F      D  GF +     I+S      ++G  +
Sbjct: 123 ITAGKYDAAIFNIAVTKLRKE--KFDFA-TYRIDTLGFYVKSTSKITSINKPEDVAGLKV 179

Query: 149 CVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +         P+        + + ++ R DA+ G  S     
Sbjct: 180 IVGSGTNQENILLGWDRQNRASGLPPVQPVYVTDDAAANLSIQSGRVDAFFGPHSIGAYK 239

Query: 205 KL 206
             
Sbjct: 240 AA 241


>gi|134302629|ref|YP_001122600.1| cyclohexadienyl dehydratase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050406|gb|ABO47477.1| cyclohexadienyl dehydratase [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 246

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 58/215 (26%), Gaps = 23/215 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  F  I  + ++  ++++              +  G       F+     +  +   
Sbjct: 1   MKKTVFTFITAIAVMISSAYAD-------------ITVGTTGDYAPFSVYNPKDNKYSSK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+    A +    +   +++++  +       L+S + D+       T  R+     +  
Sbjct: 48  DIKLIEAFAK---NKKEQVKFVKTSWATAENDLKSNKFDVFVGGMTITPERQKEFVFSNP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I++         K     + + +      V         +    K  N K   I     
Sbjct: 105 LISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENRGGTNQVFALQKLKNAKVLIIS--DN 162

Query: 180 EEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
            +   +          D    D   +      N +
Sbjct: 163 NQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 197


>gi|315654090|ref|ZP_07907006.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315488786|gb|EFU78432.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 535

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 34/269 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M      F + IL L  +   SFS  + +    K+   LK G+      +          
Sbjct: 1   MKSKINTFMIMILFLCSIITVSFSHTSIVNAKTKEP--LKIGMEANYPPYNWTQNTDAHG 58

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +     ++            +L S +ID++     
Sbjct: 59  AVPIDGSKQFANGYDVQIAKIIGKKL---HRRVIVEKTVWDGLLPSLTSGKIDLIIAGMS 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD 162
            T  R     + F           I++     ++ ++L    GA +  Q GT     +  
Sbjct: 116 PTSERRK--AIDFSIPYRKSTFVLIVNNASNFATATKLTEFKGAKLTAQQGTLHYDLIKQ 173

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A               +  +  +   D Y  +     +    N       +      
Sbjct: 174 LVGAK----RLTAMRDFSVMRQSLASGTIDGYVAEDIEYQSYHRVNPNIVSINLSKMPHF 229

Query: 223 KSPL-----APAIIQGDTEWYNIVSWTHY 246
                    +  + +G+T+  N V+    
Sbjct: 230 HVNYNDSITSIGVKKGNTKLLNQVNQILK 258


>gi|259500817|ref|ZP_05743719.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners DSM 13335]
 gi|302190732|ref|ZP_07266986.1| ABC transporter permease component [Lactobacillus iners AB-1]
 gi|309805950|ref|ZP_07699978.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|312871166|ref|ZP_07731264.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|312873326|ref|ZP_07733381.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|325912202|ref|ZP_08174599.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325913645|ref|ZP_08176007.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|329919777|ref|ZP_08276728.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
 gi|259167511|gb|EEW52006.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners DSM 13335]
 gi|308167663|gb|EFO69814.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|311091206|gb|EFQ49595.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|311093180|gb|EFQ51526.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|325475861|gb|EGC79030.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325477004|gb|EGC80154.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|328937124|gb|EGG33552.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
          Length = 535

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 34/269 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M      F + IL L  +   SFS  + +    K+   LK G+      +          
Sbjct: 1   MKSKINTFMIMILFLCSIITVSFSHTSIVNAKTKEP--LKIGMEANYPPYNWTQNTDAHG 58

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +     ++            +L S +ID++     
Sbjct: 59  AVPIDGSKQFANGYDVQIAKIIGKKL---HRRVIVEKTVWDGLLPSLTSGKIDLIIAGMS 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD 162
            T  R     + F           I++     ++ ++L    GA +  Q GT     +  
Sbjct: 116 PTSERRK--AIDFSIPYRKSTFVLIVNNASNFATATKLTEFKGAKLTAQQGTLHYDLIKQ 173

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A               +  +  +   D Y  +     +    N       +      
Sbjct: 174 LVGAK----RLTAMRDFSVMRQSLASGTIDGYVAEDIEYQSYHRVNPNIVSINLSKMPHF 229

Query: 223 KSPL-----APAIIQGDTEWYNIVSWTHY 246
                    +  + +G+T+  N V+    
Sbjct: 230 HVNYNDSITSIGVKKGNTKLLNQVNQILK 258


>gi|212634260|ref|YP_002310785.1| sodium:dicarboxylate symporter family/extracellular solute-binding
           family 3 protein [Shewanella piezotolerans WP3]
 gi|212555744|gb|ACJ28198.1| Sodium:dicarboxylate symporter family/bacterial extracellular
           solute-binding family 3 protein [Shewanella
           piezotolerans WP3]
          Length = 743

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 5/124 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           + +T    + +I++ G L+ G N   V F+   A  +  GFDV+  + L++ +     KI
Sbjct: 480 AKATGPRSVAEIRESGVLRVGYNPIQVPFSFYNAQDELVGFDVELMKKLAAEM---EVKI 536

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            ++P        A+   Q DI       T  R   +G  F          F++   +   
Sbjct: 537 AFVPYTFANVLGAINQGQFDIAISGLQMTTKRIEHVG--FTTPVLDLHYSFVVKDHRADE 594

Query: 139 SVSQ 142
             + 
Sbjct: 595 FKTD 598


>gi|260574101|ref|ZP_05842106.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
 gi|259023567|gb|EEW26858.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2]
          Length = 262

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 74/240 (30%), Gaps = 16/240 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +    ++L   +    A  L D+  R  +             + A G   G++
Sbjct: 1   MK---LTAAFAGLVLALGANFAAAEALPDLAGREVVVV-TENAYPPLQFLDAQGAAIGWE 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    ++  +     K+ Y   +      A+   + D+    T  T+  +    + F  
Sbjct: 57  YDAVAEMAKRL---NLKVSYANSSWDAMIPAVSGGEYDMGM--TGITIRDDRKEQVDFSD 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGAS----ICVQAGTT-TELTLADYFKAHNMKYHPIV 175
                    ++   +   + ++  GA+    +  Q GTT   + + +    +       +
Sbjct: 112 PYMRSEMVMLVRGDEARFTDAKSFGANPELLMAAQPGTTPFYVGVYEVLDGNEANPRIKM 171

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE       A RA   D    D +A      +++      I+ D +          +G  
Sbjct: 172 FETFGAGVEALRAGDVDLVLTDGTAGNGYVASSEGK--LKIVGDKLGAEDFGFIFPKGSD 229


>gi|325168662|ref|YP_004280452.1| amino acid ABC transporter substrate-binding protein [Agrobacterium
           sp. H13-3]
 gi|325064385|gb|ADY68074.1| amino acid ABC transporter substrate binding protein [Agrobacterium
           sp. H13-3]
          Length = 310

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 17/244 (6%)

Query: 22  TNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
                L D     IK +  LK   +      +    +G   G D D   AL   +  D  
Sbjct: 47  AFNQTLADRLPTAIKDKKILKVATDLT-PPISFQAEDGKLIGIDADIAAALGVILGID-- 103

Query: 77  KIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            +Q   +        A+ SK+ D+     +  +  E  +         FD    +  K  
Sbjct: 104 -VQMTNVGAGAAIVPAVLSKRFDMTISGINDDVELEKQVD---VIDYMFDATTIMTIKGN 159

Query: 136 G--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              I S+  L G ++ V  GT     +           + +   ++ ++  A R  R DA
Sbjct: 160 PLGIKSMEDLCGKNVAVPVGTFQARLVETASAKCTTPMNIMSIPKMPDVLQAVRTGRADA 219

Query: 194 YTGD-ISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                 +++Y  +    +      LPD+      L   + + + +  + V  +   MV +
Sbjct: 220 TVNGYATSVYTTENQTGKGVGLQALPDVRLAVGYLGMLVSRDNPDLRDTVIASLQHMVDS 279

Query: 252 EELG 255
               
Sbjct: 280 GAYK 283


>gi|158522606|ref|YP_001530476.1| extracellular solute-binding protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511432|gb|ABW68399.1| extracellular solute-binding protein family 3 [Desulfococcus
           oleovorans Hxd3]
          Length = 456

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 79/253 (31%), Gaps = 21/253 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M +      + L+ +              +   L  I++ G +           +     
Sbjct: 3   MRRPLRRVTVVLLWVALAIGVAWFYDYRRSMQSLWKIRQHGKIVVLTENNAN--SYYIYK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
               GF+ D  +A +  +  D   ++         F +LQ    D ++ +   T  R+  
Sbjct: 61  ETPMGFEYDLAKAFAGHLGVD---LEVKTPGWDALFASLQRGDGDFIAASMTHT--RKRE 115

Query: 114 LGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
               F            +      I + + L+G ++ V+  TT +  L +  +A  +   
Sbjct: 116 QYADFSEPYLSVRQHLILHKSDHSIVTPAGLAGRTVHVREDTTYQQRL-EALQADGIDLQ 174

Query: 173 PIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
            ++       E+       + D    D +     +       +  I   I  + PLA A+
Sbjct: 175 LVLHRNTPTEELIEQVAKRQIDITVADSAIALLNRRYYP---DIRIAFPIEKEQPLAWAV 231

Query: 231 IQGDTEWYNIVSW 243
            +GD      ++ 
Sbjct: 232 RKGDRGLRTEINR 244


>gi|329116786|ref|ZP_08245503.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907191|gb|EGE54105.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 522

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 81/275 (29%), Gaps = 36/275 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-------- 52
           M K  +  +  L +L     S  A          +L+ G+      F   +         
Sbjct: 1   MKKLLYSCLFTLFLLLGGVNSAQADQ--------YLRVGMEAAYAPFNWTQDTNANGAAP 52

Query: 53  ---NGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                 +  G+DV   + ++  +      ++    +      AL S +ID+++     T 
Sbjct: 53  IEGTNQYANGYDVQIAQKVAKQMNKKLLVVK---TSWTGLIPALTSGKIDMIAAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    ++F    Y      ++      +    LS  S            +    +   
Sbjct: 110 ERKK--EISFSNSYYTSEPVLVVKSNSKFAKAKSLSDFSGAKITAQQGVWHVNLIPQIKG 167

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-------ALYALKLTNDRPSEHVILPDII 221
           +K          ++  A  +   D Y  +         A  + K+   +      + +  
Sbjct: 168 VKAQT-PMGDFSQMRQALSSGVIDGYISERPEAMTAENANASFKMITLKKGNGFTVSESD 226

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           +   +A  + + D      V+     M   E +G+
Sbjct: 227 AA--IAVGMRKDDARINE-VNTVLAGMNEKERIGL 258


>gi|309807608|ref|ZP_07701556.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|309809764|ref|ZP_07703618.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169144|gb|EFO71214.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308169943|gb|EFO71982.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 535

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 34/269 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M      F + IL L  +   SFS  + +    K+   LK G+      +          
Sbjct: 1   MKSKINTFMIMILFLCSIITVSFSHTSIVNAKTKEP--LKIGMEANYPPYNWTQNTDAHG 58

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +     ++            +L S +ID++     
Sbjct: 59  AVPIDGSKQFANGYDVQIAKIIGKKL---HRRVIVEKTVWDGLLPSLTSGKIDLIIAGMS 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD 162
            T  R     + F           I++     ++ ++L    GA +  Q GT     +  
Sbjct: 116 PTSERRK--AIDFSIPYRKSTFVLIVNNASNFATATKLTEFKGAKLTAQQGTLHYDLIKQ 173

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A               +  +  +   D Y  +     +    N       +      
Sbjct: 174 LVGAK----RLTAMRDFSVMRQSLASGTIDGYVAEDIEYQSYHRVNPNIVSINLSKMPHF 229

Query: 223 KSPL-----APAIIQGDTEWYNIVSWTHY 246
                    +  + +G+T+  N V+    
Sbjct: 230 HVNYNDSITSIGVKKGNTKLLNQVNQILK 258


>gi|71282034|ref|YP_270819.1| sodium/dicarboxylate symporter family protein [Colwellia
           psychrerythraea 34H]
 gi|71147774|gb|AAZ28247.1| sodium:dicarboxylate symporter family/bacterial extracellular
           solute-binding family 3 protein [Colwellia
           psychrerythraea 34H]
          Length = 721

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 68/227 (29%), Gaps = 15/227 (6%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                L  I  R  ++ G N   + +A    +    GFDV+     +  +  D +     
Sbjct: 464 QQQPRLEVILARKGIRVGYNDASLPYAFRNKDNKMVGFDVELLNQFAKDL--DINLSMIR 521

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-----MHKKKG 136
                +    L    IDI+      T  R  +L +AF     F   G +       +   
Sbjct: 522 IEEGADEAELLADGSIDIIIGGHVITPKR--ALKMAFSDAYTFHTAGLLVTDAKRDQFSD 579

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           + ++  +    + V      +  + +Y          +                 DA   
Sbjct: 580 LYTIQAMKTLKLGVGNSKYYQDMVKEYLPNAQ-----LTEVNNVRQFLKGNYEDVDALIY 634

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              +  A  +        +I   +  ++P+A  + +G  ++   ++ 
Sbjct: 635 STESASAWAMLYPN-YSAIIPKGLKLRAPVAFVLPKGQLDYVQYMNT 680


>gi|148257734|ref|YP_001242319.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146409907|gb|ABQ38413.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 296

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 79/272 (29%), Gaps = 31/272 (11%)

Query: 2   YKDFFVSILCLIILFFTS-FSTNASILG---DIKKR------GFLKCGINTGLVGFAEVK 51
            + + V++  +I     +     A+       +K++        L   IN    G+  + 
Sbjct: 10  RRAWLVALGAIIAAGLLAPVGAQAATPAGCAALKEKYPDWKGKTLVNAINPHTPGYESID 69

Query: 52  ANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
                 + GFD+D   A+   +     K+ Y P+        L S Q DI+  +   T  
Sbjct: 70  PKDPSKYVGFDIDLGEAIGDCLG---FKLTYKPVTFAALLTTLASGQADIVISDIYATKE 126

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-------AD 162
           R       F         G ++ K                  A  T  + +         
Sbjct: 127 RAK--AADFI-TYSKVFDGVLVAKGNPKGINGINLSMCGAAAAENTGYVEVPLIQDLGPQ 183

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A   +    +++       A  A R D Y  D++ +           E  I   I  
Sbjct: 184 CKAAGKPEPTLQLYDNNANCIQAILAGRADTYVNDVNTVDQAVKAYPDKLEKAIAVTI-- 241

Query: 223 KSPL--APAIIQGDTEWYNIVSWTHYAMVTAE 252
             P     A+ +   ++ + V      +  A 
Sbjct: 242 --PYSVGIAVPKDKPKFRDAVMAALIEVQKAG 271


>gi|304395131|ref|ZP_07377015.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304357384|gb|EFM21747.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 313

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 15/178 (8%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++     K+  +P + ++  L 
Sbjct: 64  GSFTVAVAALNSPPLTVFSDDNKTLLGSEVDIARLVADSLG---LKLNVVPASWEDWPLG 120

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T   +      F      D  GF +     I S      ++G  I
Sbjct: 121 VASGKYDAAISNITVTK--DRKEKFDFA-TYRKDSLGFYVKTSSPIKSLTKAEDIAGLRI 177

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            V +GT  E  L  + K +  K    + PI  +       A +A R DAY G      
Sbjct: 178 IVGSGTNQEAILLAWDKENQAKGLKAFTPIYAKDDAAQTLALQAGRADAYFGPNVIGA 235


>gi|71278841|ref|YP_268619.1| hypothetical protein CPS_1889 [Colwellia psychrerythraea 34H]
 gi|71144581|gb|AAZ25054.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 296

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 90/282 (31%), Gaps = 34/282 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F+   L L        +T A    DI +   +   + +  + F+    NG+ KG D
Sbjct: 1   MKNKFYYLFLWLSCCSLFCSTTFARSYDDIIESNEITVAVYSDFIPFSYQ-ENGEAKGID 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKER-FLALQSK--QIDILSRNTDWTLLR------- 110
           ++  + ++  +      + +  + A E     L++   +   L R+    +LR       
Sbjct: 60  IEVAKHIAKQLG---VTLHFRWVTADENVEDDLRNNLWKGHFLKRSVADLMLRVPYDKAY 116

Query: 111 -----------EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
                         + +     T      F   K   +S+++      I V+  +  +  
Sbjct: 117 SELRDDIGERVHEQVHMFAPYHTESWKIVFNAKKIDDVSTMAVFQYHDIGVEVDSIPQFY 176

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP------SE 213
           L   F    M+     F  +    +A    + DA  G  S +   +   D        + 
Sbjct: 177 LLSVFNGR-MRNKTKQFPSLALAISAMSEQKIDAVMGLRSQVSHYQHQLDSSTYQLATNA 235

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +L        +  A+     +    ++    AMV+  ++ 
Sbjct: 236 FPMLGKQQWD--IGMAVKSDYRQLGYAIADIVEAMVSQGQMK 275


>gi|224419304|ref|ZP_03657310.1| amino-acid ABC transporter periplasmic solute-binding protein
          [Helicobacter canadensis MIT 98-5491]
 gi|313142803|ref|ZP_07804996.1| predicted protein [Helicobacter canadensis MIT 98-5491]
 gi|313131834|gb|EFR49451.1| predicted protein [Helicobacter canadensis MIT 98-5491]
          Length = 93

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 1  MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
          M K F + +L  + L       +    ++ L  IK++G +  G+ +    F  +   G  
Sbjct: 1  MKKIFLIVMLGFLGLGLVGCGEAQQNASNSLEAIKQKGVITIGVFSDKPPFGFINKEGGN 60

Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           GFDV   R ++  +  D SK+++  + A
Sbjct: 61 DGFDVQVSRQIAKDLLGDSSKVKFELVEA 89


>gi|166007117|pdb|2PYY|A Chain A, Crystal Structure Of The Glur0 Ligand-Binding Core From
           Nostoc Punctiforme In Complex With (L)-Glutamate
 gi|166007119|pdb|2PYY|C Chain C, Crystal Structure Of The Glur0 Ligand-Binding Core From
           Nostoc Punctiforme In Complex With (L)-Glutamate
          Length = 228

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 68/215 (31%), Gaps = 17/215 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L       +  F      G+  GF +D  R++++ I  +   I+Y  +   E   A++  
Sbjct: 5   LLVATRV-IPPFVLSN-KGELSGFSIDLWRSIATQIGIESKLIEYSSV--PELISAIKDN 60

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----KKGISSVSQLSGASICVQ 151
           ++++       T  RE      F    +  G   ++         I S+  L G  +   
Sbjct: 61  KVNLGIAAISITAERE--QNFDFSLPIFASGLQIMVRNLESGTGDIRSIDDLPGKVVATT 118

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           AG+T    L +           +   ++EE   A +  + DA   D   L        + 
Sbjct: 119 AGSTAATYLRE------HHISVLEVPKIEEAYKALQTKKADAVVFDAPVLLFYAANEGKG 172

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               I+  I+ +      +         I      
Sbjct: 173 KV-EIVGSILREESYGIILPNNSPYRKPINQALLN 206


>gi|154246325|ref|YP_001417283.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154160410|gb|ABS67626.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 317

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 16/220 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L+         F  + A+G   GF+VD  RA+ + +                   +++
Sbjct: 86  KELRFVTTDDYPPFNFLNADGALTGFNVDLARAICAELG---VTCVIQAAAFDTLADSVE 142

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQ 151
             + D        T        L F          F+  +++ +  ++   ++   + V 
Sbjct: 143 QGRADAAIAGLTATPQ--SRAALDFSERYLGTPARFVGKRQETLAAATPENVAAKKVAVV 200

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           A T  E  L  +F           +  ++    A +A + D   GD   L       D  
Sbjct: 201 ARTAHEAYLRSFFNEA----AIRPYPDLKAAQEALKAGQVDLLFGDGITLALWLNGADSA 256

Query: 212 SEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHY 246
           +    L    ++        + A+ +G+    + + +   
Sbjct: 257 NCCRFLGGPFTESRFFGDGFSVAVKEGNDTLRHAMDFALQ 296


>gi|29833087|ref|NP_827721.1| ABC transporter substrate-binding protein [Streptomyces avermitilis
           MA-4680]
 gi|29610209|dbj|BAC74256.1| putative ABC transporter substrate-binding protein [Streptomyces
           avermitilis MA-4680]
          Length = 318

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 95/290 (32%), Gaps = 56/290 (19%)

Query: 2   YKDFFV--SILCLIILFFTSFSTN---------------------ASILGDIKK------ 32
            +  F+  +++    +  T+  +                      A ++  ++K      
Sbjct: 8   RRRIFIPFALITSAAVLLTACGSGDSEGAGKSDAQAAAKTGGIPTADVVSAVRKNEAAAK 67

Query: 33  ---RGF--LKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
               G   L   I+      G + +       G DVDF  A+   +     K++    + 
Sbjct: 68  LLPSGTRSLTVAISVGGTPPGTSYLDDGKTLAGQDVDFANAVGKVLG---IKLKTESASF 124

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQ 142
           +    AL S + D  + N   T  R  +  + F      DGQGF      K + I+ + Q
Sbjct: 125 EAILPALDSGKYDFGASNFGVTDERRKT--IDFV-TYINDGQGFATREDSKLQKITDLKQ 181

Query: 143 LSGASICVQAGTTTELTLADYFK----AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           L G ++   AGTT E TL +  K    A    Y    +     I ++ +  R D      
Sbjct: 182 LCGLNVATGAGTTFEATLEENKKVCTDAGKKAYEVQTYNESGAIWSSLQQGRSDIVM--- 238

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD---TEWYNIVSWTH 245
           S +  L+    +      L +      +  A  +G      +   V+   
Sbjct: 239 STINGLRYAVAQQQGLKFLNEFHRLD-VGFAFKKGTKLAPAFQAAVNELI 287


>gi|271502165|ref|YP_003335191.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270345720|gb|ACZ78485.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 306

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 83/250 (33%), Gaps = 19/250 (7%)

Query: 34  GFLKCGINT-GLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   I +      A +   N    G D D  R ++ A+     K++ +P   ++  L 
Sbjct: 61  GTLTVAIASHSSPPLALLADDNKTPIGSDPDIARLVADALG---LKLKLVPTAWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS---SVSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I      + ++G  +
Sbjct: 118 IASGRYDAAILNIAVTKARKE--KFDFA-TYRVDTLGFYVKSTSRIQAIRGAADVAGLKV 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +  +      PI        + + ++ R D + G  S     
Sbjct: 175 IVGSGTNQENILLGWDRQNRAQGLAPVQPIYVTDDAAANLSIQSGRVDVFFGPHSIGAYK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                +     I P +    P+A    +G+      +S     ++   +         + 
Sbjct: 235 AALTGQTKMVGIGPTVA---PVAVTTRKGNG-LAQPISTALNGVIAGGQYAQVLDRWGEN 290

Query: 265 SKDTTNPDVQ 274
            +  T  DV 
Sbjct: 291 DEKVTRSDVN 300


>gi|86359543|ref|YP_471435.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
 gi|86283645|gb|ABC92708.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 265

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 67/235 (28%), Gaps = 14/235 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65
             +     L  +  + +A+ L D+  +  +             V    G   G++ D   
Sbjct: 6   TVLASFAALTLSPLAVSAAELPDLGGKSVVVV-TENAYPPLQFVDPKSGKAIGWEYDAMN 64

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     K++Y   +      A+   Q +     T  T+  +    + F       
Sbjct: 65  EIAKRL---NFKVEYQNTSWDAMIQAVSDGQYN--IGMTGITIKDDRKQKVDFSDPYMRS 119

Query: 126 GQGFI----MHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVE 180
            Q  +      +     S +  +   I  Q GT+     + +    +       +FE   
Sbjct: 120 QQFMLVRGDEKRFTDAKSFAAFNDGLIGAQPGTSPFYTAVYEILDGNEQNPRIKLFETFG 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               A +    D    D  A      +++      ++ + +          +G  
Sbjct: 180 ATVQALKTGDVDLVLTDSVAAKGYVDSSNGG--LKVVGEPLGTEDFGFIFPKGSD 232


>gi|308126669|ref|ZP_05911674.2| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           AQ4037]
 gi|308107965|gb|EFO45505.1| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           AQ4037]
          Length = 493

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 4   DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            F+  +  L+     +              L  IK++  L+  ++  L GF  +   G  
Sbjct: 5   KFWAMLFFLLSASVYALEISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTP 62

Query: 57  KGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           KG   +        +        +Q +PL   +   +L++   D++  N   T  R+  +
Sbjct: 63  KGIGAELLAHFEKDLRRIKPKLNVQIIPLARDQLLPSLENGSGDLVVANLTITDARKQKV 122

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKY 171
             +   ++  +           I+ + QLSG  I V+A ++   +   +        +  
Sbjct: 123 DFSTPILSGIEEWVITNKNTPTITKLEQLSGKEIWVRASSSYFESIQAVNKTLNKKGLPP 182

Query: 172 HPIVFERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             + F        E+          A   D           D    H  +P +     +A
Sbjct: 183 IIVHFIEETLQDYELVGMLNNGYIKAIVLDSHKAKLWLNAMDDIKAHKKVP-LRKNGNIA 241

Query: 228 PAIIQGDTEWYNIVSW--------THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
             + Q   +   +V+         T    V   +       +N+         +++    
Sbjct: 242 WVMRQNSPQLKAVVNKFIQKSRSGTLLGNVIYSKYIDNTNWLNKALNPKKIAQLEKL--S 299

Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEM-FDRNL-GNQSELKI-------PRGYN 327
              S  GE   L     Y +I  +  Y E  F+ NL G +  + I        R  N
Sbjct: 300 ALFSRYGEKYDLD----YLLIAAVA-YKESGFNNNLVGTRGAVGIMQVLPSTARDPN 351


>gi|257067018|ref|YP_003153274.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
 gi|256798898|gb|ACV29553.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
          Length = 521

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 80/271 (29%), Gaps = 34/271 (12%)

Query: 32  KRGFLKCGINTGLVGFAE------------VKANGDWK-GFDVDFCRALSSAIFDDPSKI 78
           +    + G+      F                + G++  G+DV F + ++  +      +
Sbjct: 25  EEDTFRVGMEVNYAPFNFSEVSDENGGYPVANSPGEYANGYDVQFAKKIADGLGKK---L 81

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI- 137
           +   +       AL S +ID +      T  R     + F    Y      +  K     
Sbjct: 82  EIYKIEWDGLIPALTSGKIDAIVAGMSPTAER--LEQIDFSVPYYHAKMVVVTQKDSKYE 139

Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              S++   GA I  Q GT     +      +  +      +    + AA  A   D Y 
Sbjct: 140 DAKSINDFEGAKITAQLGTFHVAMIDQMAGVNKQE----SMDSFPTMIAAANAGTIDGYI 195

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + +   +    N +      L  +             DT     V     + +T EE+ 
Sbjct: 196 SEEAGAESAVAANPK------LTYVTFDEANGFETKDEDTTVG--VGIAKNSPLT-EEVN 246

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
               +++   +      V   L  D+  + G
Sbjct: 247 KVLSSMDIEKEQEEIMGVMTKLTADEEESAG 277


>gi|293401054|ref|ZP_06645199.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306080|gb|EFE47324.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 299

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 63/223 (28%), Gaps = 26/223 (11%)

Query: 5   FFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE-----------VK 51
              + L +  +      +  +   +  +  +     G+      F             + 
Sbjct: 24  LATAALAMTFVLSGCGGSEDDGKNVSSVTGKEKFVVGMECNYAPFNWQSNEQTDTSVAIG 83

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G   G+DV   R ++  +     +I+   ++ +    AL S +ID +         R 
Sbjct: 84  GAGYCDGYDVRVARYVAEQL---DREIEVKKVSWEGLQPALNSGEIDAVIAGMTADDKRR 140

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAH 167
              G+ F    Y      I+ K        + + Q  G ++  Q  T  +  +       
Sbjct: 141 A--GMDFTTPYYESEMVMIVRKSDKKVAKYNDIQQFKGKTVIGQKSTNYDTVIDQIKGVK 198

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +            E+  A +    D  T ++         N  
Sbjct: 199 HATPK----ATYPEMIVALQKKEVDGITAELPVAEGAVAANKD 237


>gi|253989745|ref|YP_003041101.1| virulence sensor protein BvgS [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638193|emb|CAR66818.1| pvp sensor (virulence sensor protein bvgs) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781195|emb|CAQ84357.1| pvp sensor (virulence sensor protein bvgs) [Photorhabdus
           asymbiotica]
          Length = 1186

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 65/224 (29%), Gaps = 21/224 (9%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK--- 86
           IKK   +    +     ++ +   G+  G DVD  R +      + S I +  + A    
Sbjct: 289 IKKNPVINVATSRTEPPYSFLDKKGEITGLDVDILRLI-----GEKSGITFNFIPADGAA 343

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSG 145
                L++ +  +    T      + +  L+F           I H  +       QL  
Sbjct: 344 GVKKLLKNGEAQM----TSLVNTPDRNRWLSFSHPYGTVEWVMITHNGRNAPYEFEQLKH 399

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204
             + V         L  Y          +  + V +      A   DA     ISA Y  
Sbjct: 400 HRVAVPRDHALMSVLKQY-----PDISIVEVDSVTKGIEMVLAGAADATFDSLISADYLQ 454

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                       L D +     A        +  +I++ +  A+
Sbjct: 455 ANRYGSNISIQFLRDSLQPEQYAIL--PSYPQLVSILNKSIDAL 496


>gi|308094337|ref|ZP_05888649.2| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           AN-5034]
 gi|308095132|ref|ZP_05903597.2| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308088915|gb|EFO38610.1| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308092937|gb|EFO42632.1| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           AN-5034]
          Length = 493

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 4   DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            F+  +  L+     +              L  IK++  L+  ++  L GF  +   G  
Sbjct: 5   KFWAMLFFLLSASVYALEISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTP 62

Query: 57  KGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           KG   +        +        +Q +PL   +   +L++   D++  N   T  R+  +
Sbjct: 63  KGIGAELLAHFEKDLRKIKPKLNVQIIPLARDQLLPSLENGSGDLVVANLTITEARKQKV 122

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKY 171
             +   ++  +           I+ + QLSG  I V+A ++   +   +        +  
Sbjct: 123 DFSTPILSGIEEWVITNKNTPTITKLEQLSGKEIWVRASSSHFESIQAVNKTLNKKGLPP 182

Query: 172 HPIVFERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             + F        E+          A   D           D    H  +P +     +A
Sbjct: 183 IIVHFIEETLQDYELIGMLNNGYIKAIVLDSHKAKLWLNAMDDIKAHKKVP-LRKNGNIA 241

Query: 228 PAIIQGDTEWYNIVSW--------THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
             + Q   +   +V+         T    V   +       +N+         +++    
Sbjct: 242 WVMRQNSPQLKAVVNKFIQKSRSGTLLGNVIYSKYIDNTNWLNKALNPKKIAQLEKL--S 299

Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEM-FDRNL-GNQSELKI-------PRGYN 327
              S  GE   L     Y +I  +  Y E  F+ NL G +  + I        R  N
Sbjct: 300 ALFSRYGEKYDLD----YLLIAAVA-YKESGFNNNLVGTRGAVGIMQVLPSTARDPN 351


>gi|134290993|ref|YP_001114762.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134134182|gb|ABO58507.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 286

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 28  QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 84

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 85  IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKASPAAPVVK 142

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 143 LTGDANADKPTVDALRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 200 DLVAGRIDASFDDVTYYAANIAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 259

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 260 DTAIGAALA 268


>gi|26987128|ref|NP_742553.1| sensory box protein [Pseudomonas putida KT2440]
 gi|24981758|gb|AAN66017.1|AE016230_8 sensory box protein [Pseudomonas putida KT2440]
          Length = 1247

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 66/225 (29%), Gaps = 11/225 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK G++     F      G ++G   D+   +   +      + + P+        L   
Sbjct: 38  LKLGVDASWPPFEFRDQEGRYQGLAADYIAMIQQRLG-----VTFKPVEPSSWTEVLAQA 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           +   +          E    LAF           + HK       ++ L G  I V    
Sbjct: 93  RESRIDLLPGIMSTPERQGFLAFTRPYLDFPIVILAHKGGAQPRKLADLYGLKIAVVENY 152

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L    + H+   + +    V     A    + DA  GD+++             +
Sbjct: 153 APHELL----RTHHPDLNLVALPNVSSTLQALATDQVDAVVGDLASSIWSLRQLKLDGLY 208

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           V          LA A+ +  +    I+      M ++E   I Q 
Sbjct: 209 VSGETPYRYQ-LAMAVPRDKSVLVGILDKVMADMSSSEISQIQQH 252


>gi|157961067|ref|YP_001501101.1| extracellular solute-binding protein [Shewanella pealeana ATCC
           700345]
 gi|157846067|gb|ABV86566.1| extracellular solute-binding protein family 3 [Shewanella pealeana
           ATCC 700345]
          Length = 736

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 6/142 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +  I++ G ++ G N   V F+   A+    GFDV+  + L+  +     KI ++P    
Sbjct: 484 MQQIRESGVIRVGYNPTQVPFSFYNADQQLVGFDVELMKKLALEL---ELKIAFVPYTFS 540

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---SQL 143
                +   Q DI       T  R   +G     +          H+     +       
Sbjct: 541 NVLEGINQGQFDIAISGLQMTTKRIELVGFTTPVLDLHYAFVVKDHRVDEFKTDKLIRDA 600

Query: 144 SGASICVQAGTTTELTLADYFK 165
               I      +    L + F 
Sbjct: 601 DKIRIATVGRYSIIPQLEEKFP 622


>gi|91780447|ref|YP_555654.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693107|gb|ABE36304.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 314

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 8/184 (4%)

Query: 32  KRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L   +        +         G D D+ + ++ A+     K+ ++P+   +  L
Sbjct: 63  EAGVLTVAVAPFAAPLASYATDARTIVGSDPDYAQLVADALG---LKLAFVPVAWPDWPL 119

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            L S + D +  N   T  R+         +        ++   + I     +SG  I  
Sbjct: 120 GLASGKYDAVISNVGVTEQRKQKFDFTTYRLGLHAFYVPVVSAIQSIHEPKDISGLRIIT 179

Query: 151 QAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +GT  E  L ++ K +      +     F+ ++    A  ++R D      + L     
Sbjct: 180 GSGTIQERILLEWNKQNISHGLKEASLQYFDDLDSASLALLSNRADVIFNPHAPLAYAAA 239

Query: 207 TNDR 210
           T  +
Sbjct: 240 TQGK 243


>gi|167623210|ref|YP_001673504.1| extracellular solute-binding protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353232|gb|ABZ75845.1| extracellular solute-binding protein family 3 [Shewanella
           halifaxensis HAW-EB4]
          Length = 736

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 6/142 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +  I++ G L+ G N   V F+   A+    GFDV+  + L+S +     K+ ++P    
Sbjct: 484 IQQIRESGVLRVGYNPIQVPFSFYNADNQLVGFDVELMKKLASEM---ELKVAFVPYTFA 540

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--- 143
                +   Q DI       T  R   +G     +          H+     +  Q+   
Sbjct: 541 NVLDGINQGQFDIAISGLQMTTKRLELVGFTTPVLDLHYAFVVKDHRADEFQTDKQILEA 600

Query: 144 SGASICVQAGTTTELTLADYFK 165
               I      T    L + F 
Sbjct: 601 DKIRIASVGQYTIIPHLEETFP 622


>gi|28897331|ref|NP_796936.1| putative glycosylase [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805540|dbj|BAC58820.1| putative glycosylase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 495

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 4   DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            F+  +  L+     +              L  IK++  L+  ++  L GF  +   G  
Sbjct: 7   KFWAMLFFLLSASVYALEISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTP 64

Query: 57  KGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           KG   +        +        +Q +PL   +   +L++   D++  N   T  R+  +
Sbjct: 65  KGIGAELLAHFEKDLRKIKPKLNVQIIPLARDQLLPSLENGSGDLVVANLTITEARKQKV 124

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKY 171
             +   ++  +           I+ + QLSG  I V+A ++   +   +        +  
Sbjct: 125 DFSTPILSGIEEWVITNKNTPTITKLEQLSGKEIWVRASSSHFESIQAVNKTLNKKGLPP 184

Query: 172 HPIVFERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             + F        E+          A   D           D    H  +P +     +A
Sbjct: 185 IIVHFIEETLQDYELIGMLNNGYIKAIVLDSHKAKLWLNAMDDIKAHKKVP-LRKNGNIA 243

Query: 228 PAIIQGDTEWYNIVSW--------THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
             + Q   +   +V+         T    V   +       +N+         +++    
Sbjct: 244 WVMRQNSPQLKAVVNKFIQKSRSGTLLGNVIYSKYIDNTNWLNKALNPKKIAQLEKL--S 301

Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEM-FDRNL-GNQSELKI-------PRGYN 327
              S  GE   L     Y +I  +  Y E  F+ NL G +  + I        R  N
Sbjct: 302 ALFSRYGEKYDLD----YLLIAAVA-YKESGFNNNLVGTRGAVGIMQVLPSTARDPN 353


>gi|148545672|ref|YP_001265774.1| PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase
           [Pseudomonas putida F1]
 gi|148509730|gb|ABQ76590.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Pseudomonas putida F1]
          Length = 1247

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 66/225 (29%), Gaps = 11/225 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK G++     F      G ++G   D+   +   +      + + P+        L   
Sbjct: 38  LKLGVDASWPPFEFRDQEGRYQGLAADYIAMIQQRLG-----VTFKPVEPSSWTEVLAQA 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           +   +          E    LAF           + HK       ++ L G  + V    
Sbjct: 93  RESRIDLLPGIMSTPERQGFLAFTRPYLDFPIVILAHKGGAQPRKLADLYGLKVAVVENY 152

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L    + H+   + +    V     A    + DA  GD+++             +
Sbjct: 153 APHELL----RTHHPDLNLVALPNVSSTLQALATDQVDAVVGDLASSIWSLRQLKLDGLY 208

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           V          LA A+ +  +    I+      M ++E   I Q 
Sbjct: 209 VSGETPYRYQ-LAMAVPRDKSVLVGILDKVMADMSSSEISQIQQH 252


>gi|170735093|ref|YP_001774207.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169821131|gb|ACA95712.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 286

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 28  QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 84

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 85  IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPIVK 142

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 143 LTGDANADKPTVDTLRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 200 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 259

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 260 DTAIAAALA 268


>gi|153839762|ref|ZP_01992429.1| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           AQ3810]
 gi|149746715|gb|EDM57703.1| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           AQ3810]
          Length = 485

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 109/353 (30%), Gaps = 36/353 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +  + +           L  IK++  L+  ++  L GF  +   G  KG  
Sbjct: 1   MLFFLLSASVYALEISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTPKGIG 58

Query: 61  VDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +        +        +Q +PL   +   +L++   D++  N   T  R+  +  + 
Sbjct: 59  AELLAHFEKDLRKIKPKLNVQIIPLARDQLLPSLENGSGDLVVANLTITDARKQKVDFST 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKYHPIV 175
             ++  +           I+ + QLSG  I V+A ++   +   +        +    + 
Sbjct: 119 PILSGIEEWVITNKNTPTITKLEQLSGKEIWVRASSSYFESIQAVNKTLNKKGLPPIIVH 178

Query: 176 FERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
           F        E+          A   D           D    H  +P +     +A  + 
Sbjct: 179 FIEETLQDYELVGMLNNGYIKAIVLDSHKAKLWLNAMDDIKAHKKVP-LRKNGNIAWVMR 237

Query: 232 QGDTEWYNIVSW--------THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
           Q   +   +V+         T    V   +       +N+         +++       S
Sbjct: 238 QNSPQLKAVVNKFIQKSRSGTLLGNVIYSKYIDNTNWLNKALNPKKIAQLEKL--SALFS 295

Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEM-FDRNL-GNQSELKI-------PRGYN 327
             GE   L     Y +I  +  Y E  F+ NL G +  + I        R  N
Sbjct: 296 RYGEKYDLD----YLLIAAVA-YKESGFNNNLVGTRGAVGIMQVLPSTARDPN 343


>gi|295111599|emb|CBL28349.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Synergistetes bacterium
           SGP1]
          Length = 272

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 77/238 (32%), Gaps = 19/238 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58
           M + + +  IL    +   S    AS      +   ++         F     A  +W G
Sbjct: 1   MKRFWGWGLILAWAFIACVSREGIAS------EDKVIRVATPGNYAPFTMYDEATQEWSG 54

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D  R +      +   +Q++ L+    F  +   ++D +++    T  R       F
Sbjct: 55  FEIDMWRTIGEKAGYE---VQWVRLDLPANFAEMDLGRVDTVAKQISITPSR--QQKYDF 109

Query: 119 RPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +F      +      + S   + G SI ++ G +    +A     + ++       
Sbjct: 110 TQPYFFSPYCLTVREDNNEVKSWKDMEGKSIALREGGSELEFVAVLDPENKVEKSIYE-- 167

Query: 178 RVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               +       R  A     ++  + LK   +   + V L + I     A    + D
Sbjct: 168 --SNMLQDVSLGRVTATPYPFLTLPWVLKKNPELKLKAVDLENPIFTEVNAYPFARTD 223


>gi|229592969|ref|YP_002875088.1| putative signaling GGDEF/EAL domain-containing protein [Pseudomonas
           fluorescens SBW25]
 gi|229364835|emb|CAY52875.1| putative signalling GGDEF/EAL domains containing conserved protein
           [Pseudomonas fluorescens SBW25]
          Length = 1247

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 76/260 (29%), Gaps = 18/260 (6%)

Query: 19  SFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           + +  A  L D  +RG       L  G++     F     +G ++G   D+ R +   + 
Sbjct: 16  TATAGALTLTD-DERGWLADHQELSLGVDASWPPFEYRDEDGRYQGLAADYVRLIQDRLG 74

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                ++   +        L+  + + L          E    LAF           + H
Sbjct: 75  -----VRIKVIETPNWSAVLELARANQLDLVPSVMSTPERQNYLAFTRPYIDFPMVILAH 129

Query: 133 KKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           +      ++  L G  I V         L    + H+   + +    V     A      
Sbjct: 130 EGGVRPRNLKDLYGLKIAVVENYAPHELL----RTHHPDLNLVAMPNVSSTLQALATGEV 185

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DA   D+++             +V          LA  + + D     I+      +   
Sbjct: 186 DAVVSDLASSVWSLRELKLDGLYVSGETPYRYQ-LAMGVPRDDKMLVGILDKVLADLSPE 244

Query: 252 EELGITQKNINQVSKDTTNP 271
           E   I Q  + + + + T  
Sbjct: 245 ETNTIQQHWVGKFTDNRTFW 264


>gi|220933682|ref|YP_002512581.1| lytic transglycosylase, catalytic [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994992|gb|ACL71594.1| lytic transglycosylase, catalytic [Thioalkalivibrio sp. HL-EbGR7]
          Length = 457

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 74/241 (30%), Gaps = 13/241 (5%)

Query: 8   SILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             L L +   +        +  L  I++RG L                +G+  GF+ D  
Sbjct: 13  LALVLAVAGLSGCERAPHTSPELAAIEQRGELVVLTR-NAPTTYYFDRDGEPAGFEYDLI 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
              ++ +   P  +    ++  E   AL + + D+ +     T  R       F P    
Sbjct: 72  SGFAAQLGVTPRFVIKDSID--EIVRALAAGEGDLAAAGLTRTSRR--QEQFLFGPAYMQ 127

Query: 125 DGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI 182
             Q  +  +     +  + LSG S+ V A ++    L +  +    + +        E+I
Sbjct: 128 VQQQLVCRRGGPAPADLEGLSGVSLMVTASSSYVERLEELREQFPELTWEERADLATEQI 187

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                    D    D + +   +         + L +   + PLA  +          + 
Sbjct: 188 LEKVWNREVDCAVADSNIVAINRRYYPELLVIMPLTE---EEPLAWMLPPESRGLARAIE 244

Query: 243 W 243
            
Sbjct: 245 R 245


>gi|148358177|ref|YP_001249384.1| arginine transport system periplasmic binding protein [Legionella
           pneumophila str. Corby]
 gi|296105534|ref|YP_003617234.1| arginine transport system substrate-binding protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148279950|gb|ABQ54038.1| arginine 3rd transport system periplasmic binding protein
           [Legionella pneumophila str. Corby]
 gi|295647435|gb|ADG23282.1| arginine transport system substrate-binding protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 247

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 64/214 (29%), Gaps = 14/214 (6%)

Query: 36  LKCGINTGLVGFA----EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           L  G  +    F           ++ GF+++    +   I    +K QY PL  ++    
Sbjct: 25  LVIGTLSYNPPFEIQVNNPSKENEFYGFEIELMNEICKRI---NAKCQYKPLLFEQILAE 81

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S  I++   + + T  R  S    F          F++     I  +  L G +I + 
Sbjct: 82  INSGAINLGIGSINITPER--SERFLFSLPYKSSYHQFLIPSNSNIKKIDDLKGKTIGIH 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+ T   L  YF   N       +E   ++       +  A   +     A    +  P
Sbjct: 140 LGSPTIDYLKVYF---NNNIQFKYYETFMDLLNGLTDPQVSAIVTNSDQ--AQYWASSTP 194

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              ++                   E    ++   
Sbjct: 195 DCKLLGDGFPFGIGFGVVARLDQAELIEKINQAL 228


>gi|111221811|ref|YP_712605.1| putative ABC transporter substrate-binding protein [Frankia alni
           ACN14a]
 gi|111149343|emb|CAJ61031.1| putative ABC transporter substrate-binding protein [Frankia alni
           ACN14a]
          Length = 278

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 6/226 (2%)

Query: 32  KRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L    +      +       + KGF+     A+++ +   P K+ ++       F 
Sbjct: 40  KSGQLTVATDSPAYAPWFSDGKPANGKGFESAVAYAVAAKLGFTPDKVHWVTEPFTSSF- 98

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           A   K+ D        T  R     + F    Y   Q  +  K   I++V+ L+G     
Sbjct: 99  APGPKKFDFDINEISITPQR--QQAVDFSTGYYDVSQAVVALKSSRIANVTTLAGLKGAK 156

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTND 209
                   +L    +       P VF  + +   A      D    D+  A         
Sbjct: 157 FGAPVGTTSLDAVTRQVAPVQQPAVFNDLNDAKTAMENGPIDGIVVDLPTAFQLTSAEIP 216

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   P + +         +G+      V+     + ++ EL 
Sbjct: 217 DSLIVGQFPTVGTPEQFGLLFEKGNP-LVGKVNDALAQLTSSGELR 261


>gi|307298433|ref|ZP_07578236.1| diguanylate cyclase and metal dependent phosphohydrolase
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915598|gb|EFN45982.1| diguanylate cyclase and metal dependent phosphohydrolase
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 923

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 84/258 (32%), Gaps = 29/258 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F +    L+ L                +  ++  G +     F      G   GF+
Sbjct: 1   MRKAFSIVFFMLLSLTLFG------------QMKYIFSG-DVDYPPFEYENERGIPVGFN 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  RA+S A+     +I+           AL+S QID L            +L + F  
Sbjct: 48  VDILRAISKAL---DFEIEIELRTWASARSALESGQIDGLLGMY---YSEGRNLLVDFSN 101

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                      +K+    SS+S L  + + VQ G   +  +     +  +    +  E  
Sbjct: 102 PHTILHGSIFYNKRTEGFSSLSDLRESRVAVQKGDLMDELVT----SEGVGSEVVRVESP 157

Query: 180 EEIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           E           DA   +      L   L+     +       +++     A+ +GD+E 
Sbjct: 158 EIALRMLENGEVDAVLMNTLQGLFLIEDLSLKNLMDSEH---PVTRLEYCFAVKRGDSEL 214

Query: 238 YNIVSWTHYAMVTAEELG 255
            ++++     + +  E  
Sbjct: 215 LSLLNEGLSIISSTGEYR 232


>gi|312881037|ref|ZP_07740837.1| putative PAS/PAC sensor protein [Aminomonas paucivorans DSM 12260]
 gi|310784328|gb|EFQ24726.1| putative PAS/PAC sensor protein [Aminomonas paucivorans DSM 12260]
          Length = 654

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 65/200 (32%), Gaps = 20/200 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58
           M     ++  CL +L                 RG   L+ G+            +G  +G
Sbjct: 17  MRALALLAWGCLFLLLPAPL------------RGEEVLRVGLYEN-PPKIFTSPSGRPEG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
              D  RA+++    +   ++++P    +    L   ++D +  +  ++  R        
Sbjct: 64  IFPDLIRAIAAQ---EGWTLKFVPGTWAQCLDRLGKGELD-IMPDVSFSPERARLYSFP- 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 D           I S+  L+G  + + AG+  E +L    +   +   P+ F  
Sbjct: 119 SEPVLSDWLQVYALPGSDIRSLPDLNGKRVALLAGSIQEDSLRTLAREFELSVTPVPFPS 178

Query: 179 VEEIDAAYRAHRCDAYTGDI 198
             E   A    R DA   + 
Sbjct: 179 FNEAFRAVEEGRADAVLSNR 198


>gi|110834386|ref|YP_693245.1| ligand-binding/transglycosylase domain-containing protein
           [Alcanivorax borkumensis SK2]
 gi|110647497|emb|CAL16973.1| periplasmic binding domain/transglycosylase SLTdomain fusion
           protein [Alcanivorax borkumensis SK2]
          Length = 699

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 72/229 (31%), Gaps = 10/229 (4%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S  A     I +RG L+   +      +     G+  GFD D  +  +           
Sbjct: 265 GSAEARDWEAIGERGVLRVITSNN--PASYFMWRGELMGFDYDLIKDFAKQ--HRLRVRV 320

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GIS 138
            +  +    F AL++ + D+++ +   T  R    G AF        +  I       + 
Sbjct: 321 VVRDSPSAMFSALEAGEGDVIAASMTITSDR-QLAGWAFSKRYLEVNEQLIGEAGDVPLG 379

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA-YRAHRCDAYTGD 197
           SV  L+G ++ V   T    TL D            VF+   E+          D  T  
Sbjct: 380 SVQALAGRTVAVNPETAYYDTLKDLQATGLQFDIQEVFQASTEMLIEGVANGEYD-LTMA 438

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            S L A++ T     +  +L        +A    +        ++    
Sbjct: 439 DSHLAAMESTYRD--DIAVLFQFEPAKEIAWVTREPQKILRKQLNNYIK 485


>gi|78777208|ref|YP_393523.1| signal transduction histidine kinase [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497748|gb|ABB44288.1| signal transduction histidine kinase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 626

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 90/263 (34%), Gaps = 19/263 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-------FLKCGINTGLVGFAEVKAN 53
           M   FF+ ++   +   TS +  ++ LG  ++          +  G++     +  +  N
Sbjct: 1   MRTVFFIFLITFHLFATTSIAQKSAQLGLTQEEKQWLIDNPRILVGMDPNYAPYEWIDKN 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+  G  VD+   L   +  D         +  E     Q  ++D+L+         E S
Sbjct: 61  GNHIGVVVDYIHELEKIL--DVRFEILKNKSWDELLTLAQKGELDMLTSTV---KTPERS 115

Query: 114 LGLAFRPITYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
             L F    +      +   K   I S+ QLS   + V+ G      + ++ K    K  
Sbjct: 116 KYLTFSEPYHIAPTIIVDNKKGAFIGSLKQLSNKRVVVEKG----YFMGEFIKNKYPKIQ 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            ++    +E        R DAY GD +      +  +  S           S  A A+ +
Sbjct: 172 LVLASSTKEALEMVTDDRADAYVGDANI-VDFVMRKNDFSTLRFSGQTEYVSYQAFALTK 230

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
           G+     I++    A    EE  
Sbjct: 231 GNEPLAPILTKAM-ATTPKEEFD 252


>gi|167574433|ref|ZP_02367307.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia oklahomensis C6786]
          Length = 251

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 66/213 (30%), Gaps = 23/213 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           K FF+ ++       +S +                 G  +  V F  +       +G  V
Sbjct: 6   KRFFLGLVVAAAPLVSSAAPP-----------VYAVGATSTGVPFTFLDVKTNSIQGLLV 54

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A   A   D   ++           +L +K+ID++S     T  RE    + F   
Sbjct: 55  DAINATGKAAGFD---VKIEQTTFSALIPSLTTKKIDVISAAMLKTPARE--QVVDFSDT 109

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y  G+G ++         ++  L G  +  Q GT     L        +      ++ +
Sbjct: 110 VYAYGEGLVVRADDTGKYVTMDDLKGEIVGAQVGTAFVDALN----KKGIFKEVRTYDSI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +I       R  A  GD   L      N  P 
Sbjct: 166 ADIMRDVALGRIKAGFGDRPILSYQLRKNPNPK 198


>gi|238027410|ref|YP_002911641.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia glumae BGR1]
 gi|237876604|gb|ACR28937.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia glumae BGR1]
          Length = 282

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 77/271 (28%), Gaps = 32/271 (11%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   ++ L +  +  ++    +      K    +   ++     +      G   GF
Sbjct: 1   MKSKHSRLATLVIGAVLGSALMAGSV---QAKDWKSVTIALDGSYAPWNLTLPGGKLGGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +    L +       + + +  +       LQ+ + D+L      T  RE  L  +  
Sbjct: 58  EPELVENLCA---HAQLQCKLVTQDWDGMIPGLQAGKFDVLMDAISITPDREKILAFSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSV----------------------SQLSGASICVQAGTTTE 157
                        K    SS                       S L G +I +Q+GT   
Sbjct: 115 YAATPATFAVADTKILPKSSPALGAVRLDNDARSAAPAIEMLRSALKGKTIGLQSGTIYT 174

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             + + FK         V++   E D      R DA   DI+   A    +       ++
Sbjct: 175 AFINNNFK---DVASVRVYKSAPERDLDLANGRIDASFDDITYYTANAGKSHVVPAGPVI 231

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +       A  + DT+          A 
Sbjct: 232 TGPVWGQGEGLAFRKTDTDLKAKFDAAITAA 262


>gi|107028497|ref|YP_625592.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|105897661|gb|ABF80619.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 296

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 38  QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 94

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 95  IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPIVK 152

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 153 LTGDANADKPTVDTLRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 209

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 210 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 269

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 270 DTAIAAALA 278


>gi|76798916|ref|ZP_00781121.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 18RS21]
 gi|76585736|gb|EAO62289.1| ABC transporter, substrate-binding protein [Streptococcus
           agalactiae 18RS21]
          Length = 139

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 45/142 (31%), Gaps = 8/142 (5%)

Query: 2   YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K      I+ + +    + S+ +      KK   +          F+ V  +G   GFD
Sbjct: 4   KKVLSVTGIILVTVASLAACSSKSHTTKTGKK--EVNFATVGTTAPFSYV-KDGKLTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+      D  K+ +        F  + S +  +   N  ++  R  S    F  
Sbjct: 61  IEVAKAVFK--GSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSER--SQKYLFSY 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQ 142
                     + K   I + + 
Sbjct: 117 PIGSTPSVLAVPKNSNIKAYND 138


>gi|308125696|ref|ZP_05776751.2| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           K5030]
 gi|308115629|gb|EFO53169.1| amino-acid abc transporter binding protein [Vibrio parahaemolyticus
           K5030]
          Length = 466

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 4   DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            F+  +  L+     +              L  IK++  L+  ++  L GF  +   G  
Sbjct: 5   KFWAMLFFLLSASVYALEISPLKQPPYTGDLDVIKEKNVLRVLVSADL-GFYYI-EGGTP 62

Query: 57  KGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           KG   +        +        +Q +PL   +   +L++   D++  N   T  R+  +
Sbjct: 63  KGIGAELLAHFEKDLRKIKPKLNVQIIPLARDQLLPSLENGSGDLVVANLTITEARKQKV 122

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKY 171
             +   ++  +           I+ + QLSG  I V+A ++   +   +        +  
Sbjct: 123 DFSTPILSGIEEWVITNKNTPTITKLEQLSGKEIWVRASSSHFESIQAVNKTLNKKGLPP 182

Query: 172 HPIVFERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             + F        E+          A   D           D    H  +P +     +A
Sbjct: 183 IIVHFIEETLQDYELIGMLNNGYIKAIVLDSHKAKLWLNAMDDIKAHKKVP-LRKNGNIA 241

Query: 228 PAIIQGDTEWYNIVSW--------THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
             + Q   +   +V+         T    V   +       +N+         +++    
Sbjct: 242 WVMRQNSPQLKAVVNKFIQKSRSGTLLGNVIYSKYIDNTNWLNKALNPKKIAQLEKL--S 299

Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEM-FDRNL-GNQSELKI-------PRGYN 327
              S  GE   L     Y +I  +  Y E  F+ NL G +  + I        R  N
Sbjct: 300 ALFSRYGEKYDLD----YLLIAAVA-YKESGFNNNLVGTRGAVGIMQVLPSTARDPN 351


>gi|172087672|ref|YP_204034.2| amino-acid ABC transporter binding protein [Vibrio fischeri ES114]
 gi|215275764|sp|Q5E750|MLTF_VIBF1 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|171902267|gb|AAW85146.2| amino-acid abc transporter binding protein [Vibrio fischeri ES114]
          Length = 495

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 83/241 (34%), Gaps = 15/241 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             +S L + +      S   + L  I++RG L+          +    +    G D D  
Sbjct: 14  LVISTLLITLTGCQVESEPKTKLEQIRERGILRVSTLNNQ--LSYYIGSNGPTGLDYDLA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +A +  +                 F AL+  ++DI++ N   T  R         P+ Y+
Sbjct: 72  KAFAEKLEVKLEITP--AYTYSGLFPALERNEVDIIAANMTITPER--LQKFRPGPVYYY 127

Query: 125 DGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERV 179
             Q  +  K       I +++QL   ++ +   ++ E TL    + + N+ ++      V
Sbjct: 128 VSQQVVYKKGSWRPRNIKNLTQL-DENLTIVKDSSFEGTLIKLKEKYPNLDWNTAADTDV 186

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E+           YT   S   +L        +  +  ++    P+A  + Q + +   
Sbjct: 187 SELLKKVATGEIH-YTLADSVELSLTQRIH--PDLAVAFEVTEDQPVAWFLQQTEDDSLQ 243

Query: 240 I 240
            
Sbjct: 244 A 244


>gi|223932264|ref|ZP_03624267.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis 89/1591]
 gi|223898945|gb|EEF65303.1| putative amino acid transporter, amino acid-binding protein
           [Streptococcus suis 89/1591]
          Length = 110

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 10/106 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53
           M K     ++ L  +  ++ S       + L D++++G L   +N     F         
Sbjct: 2   MKKYIMTGLVLLATMTLSACSGNTTQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 61

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
               G D++  +A+   +  +   +++  ++       +QS Q DI
Sbjct: 62  DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDI 104


>gi|290890985|ref|ZP_06554049.1| hypothetical protein AWRIB429_1439 [Oenococcus oeni AWRIB429]
 gi|290479384|gb|EFD88044.1| hypothetical protein AWRIB429_1439 [Oenococcus oeni AWRIB429]
          Length = 158

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 26/161 (16%)

Query: 1   MYK---DFFVSILCLIILFFT---------SFSTNASIL-GDIKKRGFLKCGINTGLVGF 47
           M K    FF  ++  I +            +      +L   IK +G L  G +     +
Sbjct: 1   MKKLISKFFSGLVSAIAVIAIFAITGNQVQAAGNKQDVLYSKIKAQGKLIVGTSADFPPY 60

Query: 48  AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
                        G D+   + ++  +      +Q   ++     +A ++ ++DIL    
Sbjct: 61  EFLISKDGKQTPVGADMSLAKKIAKNLGVK---LQIKNMSFDSLLVAQKAGKVDILIAGM 117

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIM-----HKKKGISSV 140
             T  R+    + F    Y   +  ++      K   I + 
Sbjct: 118 GSTPERKK--EVDFSVPYYTAKETLVIRSNEAKKSSPIKTW 156


>gi|307608786|emb|CBW98175.1| hypothetical protein LPW_00371 [Legionella pneumophila 130b]
          Length = 247

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 14/214 (6%)

Query: 36  LKCGINTGLVGFA----EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           L  G  +    F           ++ GF+++    +   I    +K QY PL  ++    
Sbjct: 25  LVIGTLSYNPPFEIQVNNPSKENEFYGFEIELMDEICERI---HAKCQYKPLLFEQILAE 81

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S  I++   + + T  R  S    F          F++     I  +  L G +I + 
Sbjct: 82  INSGAINLGIGSINITPER--SERFLFSLPYKSSYHQFLIPSNSNIKKIDDLKGKTIGIH 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+ T   L  YF   N       ++   ++       +  A   +     A    +  P
Sbjct: 140 LGSPTADYLTTYF---NNDIQFKYYQTFMDLLNGLTDPQVSAIVTNSDQ--AQYWASSTP 194

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              ++                   E    ++   
Sbjct: 195 DCKLLGDSFPFGIGFGVVARLDQAELIEKINQAL 228


>gi|320095186|ref|ZP_08026892.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977891|gb|EFW09528.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 307

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 9/205 (4%)

Query: 34  GFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G L     +     +         +G++     AL+  +      + +     +      
Sbjct: 69  GKLTVATSDPAYSPWILDNDPASGEGYESAVVYALAEELGYTQDNVVWTRATFESSITP- 127

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASIC 149
            +K  DI  +    T  R     + F    Y   +  I  +       +SV+ L    I 
Sbjct: 128 GAKDWDINIQQFSITDER--RNAVDFSTPYYTTSEAIITKEGSPAAGAASVADLKDVLIG 185

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTN 208
           VQAGTT++  +++  +A  +   P  F   ++   A +  R DA   D+  A   +    
Sbjct: 186 VQAGTTSQQFVSEKLEA-GLTQTPQQFNSSDDTVLALQTGRVDAIVVDLPTAFNMVATQI 244

Query: 209 DRPSEHVILPDIISKSPLAPAIIQG 233
           D         D          + +G
Sbjct: 245 DNGVVVGQFADAADGENYGIVLPKG 269


>gi|46191302|ref|ZP_00206751.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Bifidobacterium longum
           DJO10A]
 gi|322689327|ref|YP_004209061.1| ABC transporter substrate-binding protein [Bifidobacterium longum
           subsp. infantis 157F]
 gi|322691339|ref|YP_004220909.1| ABC transporter substrate-binding protein [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320456195|dbj|BAJ66817.1| ABC transporter substrate binding component [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320460663|dbj|BAJ71283.1| ABC transporter substrate binding component [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 281

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 79/238 (33%), Gaps = 15/238 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G+            +G ++GFD+   + +++ +     +I +  +  + R   L +
Sbjct: 36  TIAIGVAADEPSVGAW-HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDN 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASI 148
            Q+D++  +   T   E S  + F         G ++             SV  +   ++
Sbjct: 95  GQVDMVVASWPITD--ESSAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTV 152

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           C   G  T       F+ ++ +          +   A +    DA   D++ L  L    
Sbjct: 153 CAVKGDETVGI----FRGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGL--QA 206

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               +++ +     +     A+ QG ++    ++     MV        +      +K
Sbjct: 207 ANGPQYMDVIADKGEVGYGIAVSQGTSQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 264


>gi|226304944|ref|YP_002764902.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis
           PR4]
 gi|226184059|dbj|BAH32163.1| putative ABC transporter substrate-binding protein [Rhodococcus
           erythropolis PR4]
          Length = 323

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 68/237 (28%), Gaps = 47/237 (19%)

Query: 4   DFFVSILCLIILFFTSFSTN---------------------------------ASILGDI 30
            F +S L  + L   + S+                                  A +  DI
Sbjct: 9   TFLISALATVGLLSAACSSADAESDGAQVTAAAGYNLTADQNRITTDKVDSIAAELPQDI 68

Query: 31  KKRGFLKC-GINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + RG L+  G              +    G + DF   +   +     K+     +  + 
Sbjct: 69  RDRGTLRVTGSAGSAPPLRFYADDDTTLIGSETDFAYLIGDVLG---LKVDLQTADWAQN 125

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGA 146
           F+ + S + D    N   T  R+      F      D   F   K     I     ++G 
Sbjct: 126 FVRVDSGEADAFLSNVTVTEERKE--KYDFA-TYRLDTLAFEAKKGSGISIKEPKDVAGK 182

Query: 147 SICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            I V +GT  E  L  + + +            ++   +     ++ R DAY G   
Sbjct: 183 KIAVSSGTNQEALLVKWSEQNVAAGLAPTDISYYQNTTDYYLPLQSGRIDAYFGPNP 239


>gi|190893810|ref|YP_001980352.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190699089|gb|ACE93174.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 265

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 73/248 (29%), Gaps = 15/248 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65
             +     L  +  + +A+ L D+  +  +             V    G   G++ D   
Sbjct: 6   TVLASFAALALSPLAVSAAELPDLGGKSVVVV-TENAYPPLQFVDPKSGKAIGWEYDAMN 64

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     K++Y   +      A+   Q +     T  T+  +    + F       
Sbjct: 65  EIAKRL---NFKVEYQNTSWDAMIQAVSDGQYN--IGMTGITIKDDRKQKVDFSDPYMRS 119

Query: 126 GQGFI----MHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVE 180
            Q  +      +     S +  +   I  Q GT+     + +    +       +FE   
Sbjct: 120 QQFMLVRGDEKRFTDAKSFAAFNDGLIGAQPGTSPFYTAVYEILDGNEQNPRIKLFETFG 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A +    D    D  A      +++      ++ + +          +G ++    
Sbjct: 180 ATVQALKTGDVDLVLTDSVAAKGYVDSSNGG--LKVVGEALGTEDFGFIFPKG-SDLVAP 236

Query: 241 VSWTHYAM 248
           V+    A+
Sbjct: 237 VNAAIAAL 244


>gi|242237976|ref|YP_002986157.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242130033|gb|ACS84335.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 315

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 79/252 (31%), Gaps = 18/252 (7%)

Query: 34  GFLKCGINT--GLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L   + +         +  +     G + D  R ++ ++     ++  +P + ++  L
Sbjct: 62  GKLTVAVASLRASPPLVLLGDDNKTLYGSEPDIARLVADSLG---LELNIVPTSWEDWPL 118

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGAS 147
            + S + DI   N   T  R+      F      D  GF +        I S   ++G  
Sbjct: 119 GVASGKYDIAVTNITVTKARKE--RFDFA-TYRADTLGFYVKSASPIKTIDSAKDIAGLK 175

Query: 148 ICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           + V +GT  E  L ++ K +         PI          + ++ R DA  G       
Sbjct: 176 VIVGSGTNQEAILLEWDKQNRAQGLPPVAPIYSTDDAAATLSIQSGRADATFGPNVTGAY 235

Query: 204 LKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
                       I+       + +A    +G+    N V+     ++   +         
Sbjct: 236 KASLAGNTRLVGIVNGGWPQAAHIAVTTRKGNG-LVNAVNAALNGVIEGGQYDQVLNRWG 294

Query: 263 QVSKDTTNPDVQ 274
           +  +     ++ 
Sbjct: 295 ESVERIARSEIN 306


>gi|291458994|ref|ZP_06598384.1| putative amino acid ABC transporter, amino acid-binding protein
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418248|gb|EFE91967.1| putative amino acid ABC transporter, amino acid-binding protein
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 298

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 72/238 (30%), Gaps = 34/238 (14%)

Query: 1   MY-KDFFVSILCLIILFFTSFS-----------------------TNASILGDIKKRG-- 34
           M  K  F ++  +    F + S                        +A  +   K+ G  
Sbjct: 1   MRGKRLFTALFLMAAAVFFAASCGTGSGGKQSLGTEASESETGEKQSAEGVSASKEDGGD 60

Query: 35  -FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             +  G      G+ +   NG   G+D D  + +         +I Y  +     +L L 
Sbjct: 61  RVITVGCEATTPGWVQTDENGKLSGYDYDVWQEIGRRTGY---QIDYKVMEWNSLWLMLG 117

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152
             ++D +     +   R     L+                 + + S+  L  G +I  + 
Sbjct: 118 DGRLDSVGEQISYNAERSKKYELSEPYAYNIYSL-LCAKDNEKLKSMEDLKSGMTISCET 176

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            T+ +L +A   K   ++  P+ +  +          RCD +    ++        D 
Sbjct: 177 NTSDDLIVAAIDKEFGIELKPMYYSGMS--VQDVALGRCDLWPRAYTSCVNTVKEVDN 232


>gi|78186866|ref|YP_374909.1| extracellular solute-binding protein [Chlorobium luteolum DSM 273]
 gi|78166768|gb|ABB23866.1| extracellular solute-binding protein, family 3 [Chlorobium luteolum
           DSM 273]
          Length = 464

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 15/231 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  IKK G ++                G   G+  +  ++  +++      +    LN++
Sbjct: 36  LDAIKKSGTVRV--LLSYDPINYFIYRGTPMGYSYEAAKSFCTSLGLQMEVVVVRDLNSQ 93

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGISSVSQL 143
                LQS + D+++ N   T  R     + F     +  Q  I  K      + SV +L
Sbjct: 94  LDR--LQSGEGDLVAHNLTITSGRRTM--VEFSDPISYTRQVLIQKKNPRGSPLRSVREL 149

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE---RVEEIDAAYRAHRCDAYTGDISA 200
            G  + V+  +     L    +   +    +         E+              D   
Sbjct: 150 DGRQVHVRKESAYYTELMRLRREEGIDVEIVTVPGERTTSELIRDVSRGAISYTVADRDI 209

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             A +       +      +    PLA A+ +   E  + ++       TA
Sbjct: 210 ATAHRTLFP---DIEASVPVSLSQPLAWAVGRHSPELLHALNGWLSESSTA 257


>gi|317052241|ref|YP_004113357.1| PAS sensor protein [Desulfurispirillum indicum S5]
 gi|316947325|gb|ADU66801.1| PAS sensor protein [Desulfurispirillum indicum S5]
          Length = 703

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 85/256 (33%), Gaps = 16/256 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           F   L L    F+  + +A  L D     + +R  +     T    F      G   G  
Sbjct: 14  FFCALLLYGGVFSVNAHSAVHLSDDERDFLAQRQEVVFVSQTNYPPFEFSDDYGTRNGMM 73

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  R +S+ +       ++L +   E   A+ S + D+L   T +           F  
Sbjct: 74  IELARWISAEMG---FHARFLDMEFLEAQQAVLSGEADVL---TSFFYSALRDETFDFTQ 127

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +       +   +  I  +  L G  I +Q G       A++ +  N+ +  +     
Sbjct: 128 TIFEVPASIFIAADRPDIRGLRDLHGKRIAMQRG----DYAAEFLQQQNIDFEIVPTGSF 183

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A    R DA  GD   +      ++      I+ + +     + A+  G+    +
Sbjct: 184 AEAAEAVIRGRADAVIGDEQIVLYHLYRHNLYDRMKIVGEPLYIGLNSMAVKNGNAMLQS 243

Query: 240 IVSWTHYAMVTAEELG 255
           I++       ++  L 
Sbjct: 244 ILNKGIDHAFSSGMLD 259


>gi|317047471|ref|YP_004115119.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316949088|gb|ADU68563.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 282

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 68/247 (27%), Gaps = 32/247 (12%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              K+   +          +      G   GF+ +    L   +     + + +  N   
Sbjct: 26  AQAKEWKSITIATEGSYEPWNLTLPGGKLGGFEPELMADLCKRMG---VQCKLVVQNWDG 82

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK------GISSVS 141
               L + + D++      T  R+    ++F          FI  K         I  + 
Sbjct: 83  MIAGLNAGKYDVIMDAIVITPDRKKV--VSFTTPYASTPATFITVKDSLLPPDTHIIKLH 140

Query: 142 Q---------------LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                           L G +I + +GT     +  YFK          +    +     
Sbjct: 141 DDAKEIEPAIAPLKAALKGKTIGIASGTVYTPFIDKYFK---DVADVREYTTSADAILDL 197

Query: 187 RAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A R DA   D++   ++    +  +       L   I     A  +   D +    +  
Sbjct: 198 QAGRIDAVFDDVTFAQSMLARKENSNLTFSGPQLGGPIWGEGEAMGVRMADGDLKAKLDA 257

Query: 244 THYAMVT 250
             +A + 
Sbjct: 258 AIHAALA 264


>gi|218672039|ref|ZP_03521708.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           GR56]
          Length = 103

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 13/116 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +++  ++       + NA  +     R  L          +  +   G+  GFD
Sbjct: 1   MKRTLLLALSLVV------CANNAGAMD----RKTLTIASEGASPPWNAITPQGELAGFD 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +D  R L   +     +  ++P +      AL   + D +      T  R+ S+  
Sbjct: 51  IDVGRDLCRRM---KFECTFVPQDWDGIISALTVGKFDAIMSGMAITEKRKKSIAF 103


>gi|313496751|gb|ADR58117.1| Sensory box protein [Pseudomonas putida BIRD-1]
          Length = 1247

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 66/225 (29%), Gaps = 11/225 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK G++     F      G ++G   D+   +   +      + + P+        L   
Sbjct: 38  LKLGVDASWPPFEFRDQEGRYQGLAADYIAMIQQRLG-----VTFKPVEPSSWTEVLVQA 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           +   +          E    LAF           + HK       ++ L G  I V    
Sbjct: 93  RESRIDLLPGIMSTPERQGFLAFTRPYLDFPIVILAHKGGAQPRKLADLYGLKIAVVENY 152

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L    + H+   + +    V     A    + DA  GD+++             +
Sbjct: 153 APHELL----RTHHPDLNLVALPNVSSTLQALATDQVDAVVGDLASSIWSLRQLKLDGLY 208

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           V          LA A+ +  +    I+      M ++E   I Q 
Sbjct: 209 VSGETPYRYQ-LAMAVPRDKSVLVGILDKVMADMSSSEISQIQQH 252


>gi|239905535|ref|YP_002952274.1| sensor histidine kinase [Desulfovibrio magneticus RS-1]
 gi|239795399|dbj|BAH74388.1| sensor histidine kinase [Desulfovibrio magneticus RS-1]
          Length = 985

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/250 (10%), Positives = 77/250 (30%), Gaps = 19/250 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           +     +  L+ L   + + +       + L ++K+   ++   +     F  +  +G +
Sbjct: 24  RCLAWGLAVLLGLAAVAHAADIMSPEERAALAELKQ---IRLVYDWKYPPFEFLGEDGRF 80

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   DF + + +++      +       ++    L+S +              E +  L
Sbjct: 81  SGLAADFIKEIENSLG-----VGIRAEAERDWPALLESLKERRADMAPAMAYTAERAQYL 135

Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F              K  K I  ++ L G  + V  G  +   L   +      +  + 
Sbjct: 136 LFTDPYVHLPTVVFTQKHFKHIDGLADLRGLRVGVVNGYVSHAFLKSNYP---DTFTIVP 192

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              ++E          DA+  +   + +  +  +      +      ++ L+ A+     
Sbjct: 193 VNNIQEGLRQTAFGDLDAFV-ENVGVASYYIEQEGLRNLRVAATTEHETALSMAVRSDRP 251

Query: 236 EWYNIVSWTH 245
             ++ +    
Sbjct: 252 LLFSAIQKAL 261


>gi|167568072|ref|ZP_02360988.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia oklahomensis EO147]
          Length = 251

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 66/213 (30%), Gaps = 23/213 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61
           K FF+ ++       +S +                 G  +  V F  +       +G  V
Sbjct: 6   KRFFLGLVVAAAPLVSSAAPP-----------VYAVGATSTGVPFTFLDVKTNSIQGLLV 54

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D   A   A   D   ++           +L +K+ID++S     T  RE    + F   
Sbjct: 55  DAINATGKAAGFD---VKIEQTTFSALIPSLTTKKIDVISAAMLKTPARE--QVVDFSDT 109

Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y  G+G ++         ++  L G  +  Q GT     L        +      ++ +
Sbjct: 110 VYAYGEGLVVRADDTGKYVTMDDLKGEIVGAQVGTAFVDALN----KKGIFKEVRTYDSI 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            +I       R  A  GD   L      N  P 
Sbjct: 166 ADIMRDVALGRIKAGFGDRPILSYQLRKNPNPK 198


>gi|159896975|ref|YP_001543222.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Herpetosiphon aurantiacus ATCC 23779]
 gi|159890014|gb|ABX03094.1| Ectoine/hydroxyEctoine ABC transporter solute-binding protein
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 291

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 81/266 (30%), Gaps = 17/266 (6%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M + ++    ++++ +I +     +    + L   ++ G ++ G       F+   A G 
Sbjct: 1   MRRVWWGVAGLALIGMITVLIWWLAKPLETTLERAQRTGMIRIGYAPE-APFSYRDATGT 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G +      +   +    S+++++     +    LQ+ + D+++     T  R   L 
Sbjct: 60  VVGEEAVVITWVMQRLGV--SQLEWVQTEWADLIPGLQAGRFDLIASGMFITCERAELLA 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPI 174
            +                  GI S +                E  +A            +
Sbjct: 118 FSQPTFALSPAMLVAKTNPLGIQSFADFQRPDRRLAVMRGAREAEIAQALGIA--PEQLL 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAP 228
               V+   AA  A R DA      ++  L L          P    I+   +S    A 
Sbjct: 176 FVPDVQTGLAAVLAGRADALALTDISIDLLVLQAPDQVERAMPFVPPIIDGNLSIGYGAF 235

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEEL 254
           A+   D      +       + ++E 
Sbjct: 236 AMRHKDAHLRTAIDQQLIGFIGSDEH 261


>gi|251788814|ref|YP_003003535.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247537435|gb|ACT06056.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 252

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 70/256 (27%), Gaps = 16/256 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        + L I  FT F+ +            L   ++          A+G  +G D
Sbjct: 1   MLSRNIFLAMILGITSFTVFANSPVT------GKTLNIAVSPASPPMLFKTADGKLQGID 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++   +           ++    +      A+ S Q D+       T  R+  +  +   
Sbjct: 55  LELFSSYCQERKC---TLKITEYSWDGMLGAVASGQADVAFSGISITDKRKKVMDFSSPY 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178
                    +   K  +S +S+L   SI    G      +    +        +  ++  
Sbjct: 112 YVNSFNLVSLDSHKIDLSDLSKLKNYSIGFPRGMAYADLIKTDLEPKGYYSLSNVKLYPS 171

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E     +    D    +    +  K     P E   +    +   L  A  +G     
Sbjct: 172 YNETITDLKNGNLDLAFIEDPVYFNYKNKQKMPIESRYVFK--NVDHLGFAFKKGSPARD 229

Query: 239 NIVSWTHYAMVTAEEL 254
           +  +W        EE 
Sbjct: 230 DFNAWL---NEQGEEK 242


>gi|171318275|ref|ZP_02907436.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171096539|gb|EDT41435.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 286

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 28  QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 84

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + DIL      T  RE    L F          F +                 
Sbjct: 85  IPGLQAGKFDILMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPMVK 142

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 143 LTGDANADKPTVDALRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 200 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 259

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 260 DTAIGAALA 268


>gi|170701277|ref|ZP_02892243.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
 gi|170133800|gb|EDT02162.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria IOP40-10]
          Length = 286

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 28  QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 84

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
              LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 85  IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPMVK 142

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 143 LTGDANADKPTVDALRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 200 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 259

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 260 DTAIGAALA 268


>gi|116672449|ref|YP_833382.1| luciferase family protein [Arthrobacter sp. FB24]
 gi|116612558|gb|ABK05282.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 734

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 13/198 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKI 78
            +  A +   I K G L      G +  +     +    G ++D  + ++  +     ++
Sbjct: 82  AALAAKVPELIGKDGKLTVATTAGSIPLSFHATDDKTPVGSELDIAQLVADKLG---LEL 138

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136
                + +   L  QS   + +  N      R       F         GF   K     
Sbjct: 139 DVQVTSWENWPLKTQSGDFEAVFSNVGINAARVKL--FDFA-SYRAAYMGFEAKKSSSYD 195

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCD 192
           I     +SG  + V +GT  E  L  + K    K         +    +   A  + R D
Sbjct: 196 IKGADDISGLKVSVGSGTNQEKILLAWNKELEAKGKAPAVLQYYSSDADTILALSSGRTD 255

Query: 193 AYTGDISALYALKLTNDR 210
                  +    + T D 
Sbjct: 256 LNIAPYPSTAYRENTRDD 273


>gi|261339910|ref|ZP_05967768.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288317821|gb|EFC56759.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 310

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 76/250 (30%), Gaps = 15/250 (6%)

Query: 34  GFLKCGINT-GLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G     +              N    G +VD  R ++ ++  + + +     + ++  L 
Sbjct: 61  GKFTVAVAGLNQPPLTVFADDNKTLLGSEVDIARLVADSLGLELNVVP---TSWEDWPLG 117

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASI 148
           + S + D    N   T  R+      F      D  GF +     I +      ++G  I
Sbjct: 118 VASGKYDAAISNITVTKARKE--KFDFA-TYRKDSLGFYVKSTSPIKTLEKAEDIAGLRI 174

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K    + P+  +       A ++ R DA+ G        
Sbjct: 175 IVGSGTNQEAILLAWNAENLKKGLKPFTPVYTKDDAAQTLALQSWRADAWFGPNVIGAWK 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
              + +      +     K+      ++  +     V      ++   +         + 
Sbjct: 235 AALSGKTRLVGSVDGGWPKAAHIAVTLKKGSGLVEPVQTALNGVIKNGDYDKVLNRWGEG 294

Query: 265 SKDTTNPDVQ 274
            +   N +V 
Sbjct: 295 VERIPNSEVN 304


>gi|73661929|ref|YP_300710.1| putative ABC-type amino acid transport system periplasmic component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494444|dbj|BAE17765.1| putative ABC-type amino acid transport system periplasmic component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 284

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 92/287 (32%), Gaps = 20/287 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKANGDWKGFD 60
            K FF+ +  L  L     +T+         +  +K  ++  +   +     N ++ G D
Sbjct: 5   KKYFFMMLCVLCFLLSACNATHND--DTSSHKKEIKVALSAEVNPPYLYTTKNNEFIGLD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +++ + L   +       +Y     +   + + + + D+       T  RE        P
Sbjct: 63  MEYMKLLEKKL--PQYDFKYEVGEEESNLVGIGAGKFDMGINWFFKTPEREKQFLYQDEP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFE 177
            +Y      +      I  +  L G +I   A +    ++   +  +    ++ + I   
Sbjct: 121 YSYALPLLVVNRDNNDIHHLDDLPGKNITPMAPSGGLYSILSEYNKNHTDKIQVNTIQEP 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +        R DA   + +   A++           +  I+ K PL     +   + 
Sbjct: 181 SNGDNLKMVSQQRRDAMLLNWNTYKAIQSQVKEDV---KIGGIVKKEPLHIVYNKKHQQL 237

Query: 238 YNIVSWTH-----YAMVTAEELGITQKNI----NQVSKDTTNPDVQR 275
           ++ +            + A        N+    + ++K  +  +V R
Sbjct: 238 HDDIDQATIELKKEGKLQALSKKYFDINVFEDLDDINKKKSQLEVHR 284


>gi|300716000|ref|YP_003740803.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae
           Eb661]
 gi|299061836|emb|CAX58952.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae
           Eb661]
          Length = 285

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 72/282 (25%), Gaps = 47/282 (16%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     +   V+ L    L               K+   +          +      G  
Sbjct: 1   MKHPLVRRVLVTSLVTSALLCAVSVQA-------KEWKSITIATEGSYEPWNMTLPGGKL 53

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF+ +    L   +       + +  N       +Q+ + D++      T   +    +
Sbjct: 54  SGFEPELMADLCQRM---KISCKLVVQNWDGMIAGMQAGKYDVIMDAIVITP--DRRKVI 108

Query: 117 AFRPITYFDGQGFIMHKKKGISSV-------------------------SQLSGASICVQ 151
            F          FI  K  G+                            + L G +I + 
Sbjct: 109 DFTVPYASTPASFITTKSGGVLPAGTGAAGIIKLHDDAKEIEPAIASLKAALKGKTIGIA 168

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
           +GT     +  YFK          +    +     +A R DA   D++   ++    +  
Sbjct: 169 SGTVYTPFIDKYFK---DVATVREYNASADAILDLQAERIDAVFDDVTFATSILSKPENK 225

Query: 212 SEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                   L   I     A  I + D +    +     A + 
Sbjct: 226 DLQLGGTQLGGPIWGEGEALGIRKSDNDLKAKLDEAIKAALA 267


>gi|325062905|gb|ADY66595.1| putative cystine-binding periplasmic protein [Agrobacterium sp.
           H13-3]
          Length = 312

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 14/187 (7%)

Query: 32  KRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
             G L        L             G + D  + ++ ++  +   +     +      
Sbjct: 61  ADGKLTVATVPFRLPLVDYASDTKTPIGVEPDIAQLVADSLGLELQLVPIAWADWPL--- 117

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI---MHKKKGISSVSQLSGAS 147
            L S + D ++ N   T  R+      F      D  GF      K   IS    ++G  
Sbjct: 118 GLTSGKYDAVTSNITVTEARKE--KFDFS-SYRNDLLGFYVGSNSKVTSISKPEDVAGLK 174

Query: 148 ICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           + V A T  E  L  + K +  K         ++    +D A ++ R DAY G  +    
Sbjct: 175 VIVGAATNQEQILLKWIKDNKAKGLADTDVQYYDDQAVLDVALQSGRADAYLGPNATSAF 234

Query: 204 LKLTNDR 210
              +  +
Sbjct: 235 QAASQKK 241


>gi|197334593|ref|YP_002155410.1| amino-acid abc transporter binding protein [Vibrio fischeri MJ11]
 gi|197316083|gb|ACH65530.1| amino-acid abc transporter binding protein [Vibrio fischeri MJ11]
          Length = 495

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 83/241 (34%), Gaps = 15/241 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             +S L + +      S   + L  I++RG L+          +    +    G D D  
Sbjct: 14  LVISTLLITLTGCQVESEPKTKLEQIRERGILRVSTLNNQ--LSYYIGSNGPTGLDYDLA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +A +  +                 F AL+  ++DI++ N   T  R         P+ Y+
Sbjct: 72  KAFAEKLEVKLEITP--AYTYSGLFPALERNEVDIIAANMTITPER--LEKFRPGPVYYY 127

Query: 125 DGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERV 179
             Q  +  K       I +++QL   ++ +   ++ E TL    + + N+ ++      V
Sbjct: 128 VSQQVVYKKGSWRPRNIKNLTQL-DENLTIVKDSSFEGTLIKLKEKYPNLDWNTAADTDV 186

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E+           YT   S   +L        +  +  ++    P+A  + Q + +   
Sbjct: 187 SELLKKVATGEIH-YTLADSVELSLTQRIH--PDLAVAFEVTEDQPVAWFLQQTEDDSLQ 243

Query: 240 I 240
            
Sbjct: 244 A 244


>gi|23466005|ref|NP_696608.1| solute binding protein of ABC transporter system [Bifidobacterium
           longum NCC2705]
 gi|23326723|gb|AAN25244.1| solute binding protein of ABC transporter system [Bifidobacterium
           longum NCC2705]
          Length = 308

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 87/282 (30%), Gaps = 25/282 (8%)

Query: 1   MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKRG-----FLKCGINTGLVGFAEV 50
           M + F   ++      F      S       +      G      +  G+          
Sbjct: 19  MRRGFRSRLMAGFAAAFGVILPLSGLAGCGQIQVTTVSGAPEGPTIAIGVAADEPSVGAW 78

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G ++GFD+   + +++ +     +I +  +  + R   L + Q+D++  +   T   
Sbjct: 79  -HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDNGQVDMVVASWPITDG- 136

Query: 111 EISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYF 164
             S  + F         G ++             SV  +   ++C   G  T       F
Sbjct: 137 -SSAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTVCAVKGDETVGI----F 191

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +          +   A +    DA   D++ L  L        +++ +     + 
Sbjct: 192 RGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGL--QAANGPQYMDVIADKGEV 249

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               A+ QG ++    ++     MV        +      +K
Sbjct: 250 GYGIAVSQGTSQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 291


>gi|227488162|ref|ZP_03918478.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227091880|gb|EEI27192.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 80

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 184 AAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A+ A RCD ++ D S L +++      P ++V+LP+IISK PL P + QGD  W N+V 
Sbjct: 1   NAFAAGRCDVFSTDASGLASIRISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNVVR 60

Query: 243 WTHYAMVTAEELGITQKNIN 262
           W+  AM+ AEE G+T  N++
Sbjct: 61  WSLSAMIEAEEYGVTSANVD 80


>gi|169824809|ref|YP_001692420.1| amino acid ABC transporter permease [Finegoldia magna ATCC 29328]
 gi|167831614|dbj|BAG08530.1| amino acid ABC transporter permease protein [Finegoldia magna ATCC
           29328]
          Length = 526

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 32/227 (14%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--------- 49
           M        SI+ ++++ F   +  +       ++     G+      F           
Sbjct: 1   MKNFTRKLTSIVMILMMMFVFVNNESFA-----EKDTFVIGMEANYAPFNWSQSTDANGA 55

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                + G++  G+D+   + ++  +      I+   +       A+ S ++D +     
Sbjct: 56  YPIDNSKGEYANGYDLQIAKKIADNLGKKLVVIK---MEWDGLAPAVMSGKVDAIIAGMS 112

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLAD 162
            T  R+    + F    Y      +  K        S++ L G  I  Q  T     +  
Sbjct: 113 PTKERKE--QIDFSDTYYSSDLVIVTKKDSKYINAKSLNDLKGFKITGQLNTFHYSVIDQ 170

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                 +       E    + +A  A + D Y  +     + + +N 
Sbjct: 171 IKDCDKLP----AMESFPSMLSAVLAEKIDGYVSEKPQALSAEASNA 213


>gi|304311857|ref|YP_003811455.1| probably extracellular solute-binding protein, family 3:slt [gamma
           proteobacterium HdN1]
 gi|301797590|emb|CBL45811.1| probably extracellular solute-binding protein, family 3:slt [gamma
           proteobacterium HdN1]
          Length = 481

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 68/251 (27%), Gaps = 10/251 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    S +   +L   +      +L  I++ G L                +  + GF+ D
Sbjct: 20  RTLAASAISAFLLLAPNPQPEGPVLDRIQQSGQLVVATRND-PSTYFKIGSASYAGFEHD 78

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
                + ++  D   +  +  +       L   ++D+++     T   E      F P  
Sbjct: 79  LVTRYADSMGLD--VVWKVYGDIASMLNDLDQGKVDLVAAGLPVTPKNEK--RALFAPSY 134

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK--YHPIVFERVE 180
                  +        S +     S  V +         +  +  N              
Sbjct: 135 NEAAPVLVYRNDFAPPSSTDAIAQSRLVISAQAGSAPKLETLRKSNPDLLTDERRNLSPT 194

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            + +       D    + +    L        +   + D  +   +A A+ + +   +  
Sbjct: 195 VLLSLLAEGEVDYVVLNDNVFNQLHALYPSLRKGEQMDDRHA---IAWALNRSEDASFLA 251

Query: 241 VSWTHYAMVTA 251
               ++A V A
Sbjct: 252 SLQEYFAQVNA 262


>gi|256392944|ref|YP_003114508.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256359170|gb|ACU72667.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 337

 Score = 76.7 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 16/199 (8%)

Query: 24  ASILGDIKKRGFLKCGI---NTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           A +   I+  G L+  I     G      V ++     G + D  R ++  +   P    
Sbjct: 69  AELPASIRDGGQLRVAIGDLPAGTPPLFFVGSDQKTLTGSEPDLARLVAGVLGLKP---A 125

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +   N    F+A+ S +  +   N   T  R+      F      D  GF + K    + 
Sbjct: 126 FDNANWDNMFVAIDSGKDAVGFANITDTEKRKE--KYDFA-SYREDNLGFEVLKSNPWTF 182

Query: 140 VSQ---LSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 L+G +I V +GT  E  L ++    +A    +    +        A  + + D 
Sbjct: 183 GGDYRALAGKTIAVGSGTNQEKILLEWQTKLRAEGKDFSVKYYPDANSTLLALTSGKIDI 242

Query: 194 YTGDISALYALKLTNDRPS 212
           + G    +        +  
Sbjct: 243 FLGANPGVAYQVTQTAKSP 261


>gi|312879479|ref|ZP_07739279.1| methyl-accepting chemotaxis sensory transducer [Aminomonas
           paucivorans DSM 12260]
 gi|310782770|gb|EFQ23168.1| methyl-accepting chemotaxis sensory transducer [Aminomonas
           paucivorans DSM 12260]
          Length = 620

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 81/233 (34%), Gaps = 19/233 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVG-FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           S  A  L D++ RG ++ GI  G  G F     +G   GFD D   AL+ A    P    
Sbjct: 382 SPGALSLEDLRCRGTIRMGIEQGDFGVFHFW-RDGRVAGFDADLGLALAQATGVRPE--- 437

Query: 80  YLPLNAKERFLALQSKQIDILSRN------TDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           ++P+          +      S        T  T L E    +      +  GQ  ++ +
Sbjct: 438 WVPIPWGNGEPGTITGTWSAGSFQGFDLLVTAVTKLPERIERVTLSDSYFESGQLVVVPR 497

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            +G+SS+  L   ++ V  G T+E       K        +      +++ A  A + DA
Sbjct: 498 DRGLSSLLDLKERAVGVTRGATSEQAARGKLK----HSRIVPLPSARDVEQALEAGKVDA 553

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTH 245
              D    + +   +    +   L   +++      + +    +   +V    
Sbjct: 554 LVVDGPVAWGMTDRHP---QWTYLETRLTQEHFGITLPRDVSWDLKELVDQVV 603


>gi|218510850|ref|ZP_03508728.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli Brasil 5]
          Length = 265

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 73/248 (29%), Gaps = 15/248 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65
             +     L  +  + +A+ L D+  +  +             V    G   G++ D   
Sbjct: 6   TVLASFAALALSPLAVSAAELPDLGGKSVVVV-TENAYPPLQFVDPKSGKAIGWEYDAMN 64

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++  +     K++Y   +      A+   Q +     T  T+  +    + F       
Sbjct: 65  EIAKRL---NVKVEYQNTSWDAMIQAVSDGQYN--IGMTGITIKDDRKQKVDFSDPYMRS 119

Query: 126 GQGFI----MHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVE 180
            Q  +      +     S +  +   I  Q GT+     + +    +       +FE   
Sbjct: 120 QQFMLVRGDEKRFTDAKSFAAFNDGLIGAQPGTSPFYTAVYEILDGNEQNPRIKLFETFG 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A +    D    D  A      +++      ++ + +          +G +E    
Sbjct: 180 ATVQALKTGDVDLVLSDSVAAKGYVDSSN--GALKVVGEALGTEDFGFIFPKG-SELVAP 236

Query: 241 VSWTHYAM 248
           V+    A+
Sbjct: 237 VNAAIAAL 244


>gi|326796875|ref|YP_004314695.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326547639|gb|ADZ92859.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 264

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 75/259 (28%), Gaps = 21/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M +    +I  +         T+A+ L D+K R  +                + G   G+
Sbjct: 1   MKRSLLATITAVFTGLILPHLTHAADLPDLKGR-TIVAVTENAYAPLNFSDPSTGKGIGW 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D    ++  +    +K+ +   +      A++  Q D+          R+    + F 
Sbjct: 60  EYDAFNEIAKRL---NAKVDWQLSSWDTMIQAVKQGQYDVGMDGITINDKRKK--QVDFS 114

Query: 120 PITYFDGQGFIMHKKKGISS-------VSQLSGASICVQAGTTT-ELTLADYFKAHNMKY 171
                  Q  ++  ++   S          L       Q GTT   + + +    +    
Sbjct: 115 EPYMVSEQFMLVRAEEDRFSNAKEFAKDDDLY---FGAQPGTTNFYVAVYNVLDGNESNA 171

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
              +FE       A ++   D+   D ++          P    +    +          
Sbjct: 172 RISLFETFGASVQALKSADVDSVLMDATSARGYI--GANPGAFKVTGGPLGTEEFGFIFT 229

Query: 232 QGDTEWYNIVSWTHYAMVT 250
             D++    V+    +M  
Sbjct: 230 P-DSDLVAPVNAALQSMKE 247


>gi|309804119|ref|ZP_07698200.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 11V1-d]
 gi|308163887|gb|EFO66153.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 11V1-d]
          Length = 437

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 34/269 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M      F + IL L  +   SFS  + +    K+   LK G+      +          
Sbjct: 1   MKSKINTFMIMILFLCSIITVSFSHTSIVNAKTKEP--LKIGMEANYPPYNWTQNTDAHG 58

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +     ++            +L S +ID++     
Sbjct: 59  AVPIDGSKQFANGYDVQIAKIIGKKL---HRRVIVEKTVWDGLLPSLTSGKIDLIIAGMS 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD 162
            T  R     + F           I++     ++ ++L    GA +  Q GT     +  
Sbjct: 116 PTSERRK--AIDFSIPYRKSTFVLIVNNASNFATATKLTEFKGAKLTAQQGTLHYDLIKQ 173

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A               +  +  +   D Y  +     +    N       +      
Sbjct: 174 LVGAK----RLTAMRDFSVMRQSLASGTIDGYVAEDIEYQSYHRVNPNIVSINLSKMPHF 229

Query: 223 KSPL-----APAIIQGDTEWYNIVSWTHY 246
                    +  + +G+T+  N V+    
Sbjct: 230 HVNYNDSITSIGVKKGNTKLLNQVNQILK 258


>gi|220935455|ref|YP_002514354.1| methyl-accepting chemotaxis sensory transducer [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219996765|gb|ACL73367.1| methyl-accepting chemotaxis sensory transducer [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 612

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 72/222 (32%), Gaps = 26/222 (11%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L +I++RG L+  I     G +  +  GD  +G D D+ RA +  +  +    Q+L  
Sbjct: 306 DRLAEIRRRGVLRVAIEPDFKGLSFRRRPGDPLQGLDADYARAFARWLGVE---CQFLEC 362

Query: 84  NAKERFLALQSKQID------ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-G 136
              +    L + +        ++               +AF     +        K    
Sbjct: 363 PWDQCTELLAAGRAPGEPEADLVWSALPPNAS---YRDVAFSESYTYLPYALARRKGDTR 419

Query: 137 ISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKY-------HPIVFERVEEIDAAY 186
           IS ++ L G  +          TLA     + A+  +        + + +     I    
Sbjct: 420 ISGIADLEGRVLGCINDPAAFDTLAGAGLRWPANQDQPGGRVRLANLVAYSDQGRIHDCL 479

Query: 187 RAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPL 226
                DA+  D    +      D P   +  +LP  IS SP 
Sbjct: 480 ADGLVDAFAVDRPIYWWACYGEDSPWRGQIELLPAPISASPW 521


>gi|209546898|ref|YP_002278816.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538142|gb|ACI58076.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 276

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 69/238 (28%), Gaps = 21/238 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M     ++++  +        +       ++K G L+CG       +       G++ GF
Sbjct: 9   MRALPVLALMGGLSATAAHAQSAEGYWQGVQKAGTLRCGAAVA-PPYVMRDPATGEYSGF 67

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D C+  +  +   P    ++          LQ+ + D+   +         ++ + F 
Sbjct: 68  FADLCKEFADVLKVKPE---FVDTTWDNIVAGLQAGKWDL---SLALNRTPTRAMAVQFS 121

Query: 120 PITYFDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                       +K     +           SG ++ V +GT  +  ++   K       
Sbjct: 122 IPAMEYQISLAYNKNNPKITAGAASVADIDKSGVTLAVMSGTAQDKAISAAVK----NAT 177

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
            +     +E   A  + R D              T   P   V L    + +    A 
Sbjct: 178 IMRLPGNDETRLAVTSKRADILVDASDTN--QLFTQSNPDWAVALNPTPALAKQGVAF 233


>gi|309804833|ref|ZP_07698895.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 09V1-c]
 gi|308165772|gb|EFO67993.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 09V1-c]
          Length = 437

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 34/269 (12%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-------- 49
           M      F + IL L  +   SFS  + +    K+   LK G+      +          
Sbjct: 1   MKSKINTFMIMILFLCSIITVSFSHTSIVNAKTKEP--LKIGMEANYPPYNWTQNTDAHG 58

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
              +  +  +  G+DV   + +   +     ++            +L S +ID++     
Sbjct: 59  AVPIDGSKQFANGYDVQIAKIIGKKL---HRRVIVEKTVWDGLLPSLTSGKIDLIIAGMS 115

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD 162
            T  R     + F           I++     ++ ++L    GA +  Q GT     +  
Sbjct: 116 PTSERRK--AIDFSIPYRKSTFVLIVNNASNFATATKLTEFKGAKLTAQQGTLHYDLIKQ 173

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
              A               +  +  +   D Y  +     +    N       +      
Sbjct: 174 LVGAK----RLTAMRDFSVMRQSLASGTIDGYVAEDIEYQSYHRVNPNIVSINLSKMPHF 229

Query: 223 KSPL-----APAIIQGDTEWYNIVSWTHY 246
                    +  + +G+T+  N V+    
Sbjct: 230 HVNYNDSITSIGVKKGNTKLLNQVNQILK 258


>gi|220934224|ref|YP_002513123.1| extracellular solute-binding protein family 3 [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995534|gb|ACL72136.1| extracellular solute-binding protein family 3 [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 472

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 82/239 (34%), Gaps = 16/239 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               ++ + I    +F+   S L  +  RG L   +  G         +G   GF+ +  
Sbjct: 6   LLGFLILVAITLLFAFNNPRSALDRVLDRGELVVAMRVG-PTTYFSGPDG-VTGFEYELA 63

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +A +  +      +  +P   +E    ++  ++D+ +     T  R     + F P    
Sbjct: 64  QAFAERLGVRLRVV--VPDRFEEILPMVERGRVDLAAAGITVTEQR--RQQVRFGPAYKE 119

Query: 125 DGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHPIVFERV 179
             +  +    ++    +++ L+G ++ V  G+T    L++    F   N +        +
Sbjct: 120 VTEQLVYRMGRESRPRTLADLNGQTLGVLPGSTHASRLSELQSEFPELNWQET--AHGDI 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + +         +    D   L +L+           + +  S   LA A+ +   +  
Sbjct: 178 KSLLREVWRGGLELAVADSVELASLQRFYPELRAAFDISEPRS---LAWALPRVRDDSL 233


>gi|158422002|ref|YP_001523294.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158328891|dbj|BAF86376.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 290

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 72/266 (27%), Gaps = 30/266 (11%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASIL--------------GDIKKRGFLKCGINTGLVGF 47
           ++     I+    +   +    A  +                 +    L+   +     F
Sbjct: 13  FQSLLAMIVAFAPVPLLAQPAPAGPVVPSFWSASRRLERPDTTRLPSTLRFLTSDDYPPF 72

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                +G   GF+VD  RA+ + +           ++      AL   + D +      T
Sbjct: 73  NFSGPDGALMGFNVDLARAVCAEL---ALTCTLQAVDFDTLLDALDQNKGDAVIAGLAAT 129

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFK 165
                   + F          F+      +   + + +    + V AGT+ E  L  +F 
Sbjct: 130 PANRA--KVDFSERYLGTPARFVARTGLSLPGATPADVGARRVAVAAGTSHEAYLKAFFP 187

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
                     +  V    AA  A   D   GD   L               +    ++S 
Sbjct: 188 QAK----IQPYPDVAAARAALLAGEADLLFGDGIGLSLWLNGTQANGCCRFVGGPFTESR 243

Query: 226 L-----APAIIQGDTEWYNIVSWTHY 246
                 + A+  G+ +    + +   
Sbjct: 244 YFGDGLSVAVKSGNDQLRRAIDYALQ 269


>gi|117928848|ref|YP_873399.1| extracellular solute-binding protein [Acidothermus cellulolyticus
           11B]
 gi|117649311|gb|ABK53413.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidothermus cellulolyticus 11B]
          Length = 302

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 63/228 (27%), Gaps = 18/228 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFD 73
                +  A  L    K G LK G +           +     +GF+ D  +AL   +  
Sbjct: 46  TSAVGTAGAQPL----KAGTLKIGTSADFPPMMIRDPSDPSKVQGFEADMIKALMDHV-- 99

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
                     N      A+QS Q+D+   +   T  RE    + F P         +  K
Sbjct: 100 -HQNYTIQISNFSGLIPAIQSGQLDMAVSDVYVTAEREKV--VDFVPYMKSGLSVLVAQK 156

Query: 134 K-KGISSVSQLSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEEIDAAYR 187
                 S   L G  I V  G+ +E             A         F+ V +  A   
Sbjct: 157 NLSTTKSELDLCGKPIGVVTGSPSEAEAGNSMTQKCKSAGKAGLDLKSFQAVSDELAQID 216

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
             R      + S            +  V      ++  +  A+ +   
Sbjct: 217 NGRLFGII-EDSLSLIYVQKQKPGAYGVAFVVPGTEIEVGIAVAKNSP 263


>gi|304395135|ref|ZP_07377019.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304357388|gb|EFM21751.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 299

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 35/231 (15%)

Query: 1   MYKDFFVSILCLIILFFTSF--------------STNASILGDI------KKRGFLKCGI 40
           M    F +++ L  L  ++                 N   +  I       + G L    
Sbjct: 1   MRGLTFTALMLLPTLTCSAAEKLDVLKNEVPIPAPANPQAIAKIPAGFHFIEAGTLTVAT 60

Query: 41  N-TGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           + T     + + ++     G D D  R L+ ++     K++ +P + ++  L + + + D
Sbjct: 61  SATNSPPLSLLASDNVTRIGSDPDIARLLADSLG---LKLKLVPASWEDWPLGISAGRYD 117

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTT 155
           +   N   T  R+      F      D   F +     I   +S + ++G  I V +GT 
Sbjct: 118 VAMFNIAVTEERKK--KFDFA-TYRADNHAFAVKSDSHISRINSPADIAGKRIIVSSGTN 174

Query: 156 TELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            E  L  + + +  K      PI             + R DA  G  S   
Sbjct: 175 QERILLSWDQQNRAKGLPAVTPIYLTDDASATLTLLSGRADAMFGPHSMAA 225


>gi|296454276|ref|YP_003661419.1| family 3 extracellular solute-binding protein [Bifidobacterium
           longum subsp. longum JDM301]
 gi|296183707|gb|ADH00589.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. longum JDM301]
          Length = 308

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 87/282 (30%), Gaps = 25/282 (8%)

Query: 1   MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKRG-----FLKCGINTGLVGFAEV 50
           M + F   ++      F      S       +      G      +  G+          
Sbjct: 19  MRRGFRSRLMAGFAAAFGVILPLSGLAGCGQIQVTTVSGAPEGPTIAIGVAADEPSVGAW 78

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G ++GFD+   + +++ +     +I +  +  + R   L + Q+D++  +   T   
Sbjct: 79  -HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDNGQVDMVVASWPITDG- 136

Query: 111 EISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYF 164
                + F         G ++             SV  +   ++C   G  T       F
Sbjct: 137 -SGAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTVCAVKGDETVGI----F 191

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +          +   A +    DA   D++ L  L+     P    ++ D    S
Sbjct: 192 RGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGLQA-ASGPQYMDVIADKGEVS 250

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               A+ QG ++    ++     MV        +      +K
Sbjct: 251 -YGIAVSQGTSQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 291


>gi|331695542|ref|YP_004331781.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Pseudonocardia dioxanivorans CB1190]
 gi|326950231|gb|AEA23928.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Pseudonocardia dioxanivorans CB1190]
          Length = 300

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 80/277 (28%), Gaps = 25/277 (9%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
             +     TS S     L + +  G +K GI      +     +G   G   +  RA+  
Sbjct: 27  ALISACTSTSQSGGGDTLANARSAGTIKIGIAGEE-PYGFTDTSGKVTGEAPEVARAVLK 85

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           AI    + +    ++  +   AL + Q D++    + T  R       F    Y     F
Sbjct: 86  AIG--IADVNAQQVSFDQLIPALNANQYDMVCAGMNITAAR--CQQATFSIPDYSAKTAF 141

Query: 130 IMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           ++ K   +GI++   ++  ++ +   +        Y K   +    +     +       
Sbjct: 142 LVPKGNPQGIATFQDIASKNLQLAVLSAAVE--QGYAKDAGVPDSNVAAFPDQNALLQAV 199

Query: 188 AHRCDAYTGDISALYALKLTNDRPSE----HVILPDIISKSPL----APAIIQGDTEWYN 239
                A             +   P            + +  P+         + DT   +
Sbjct: 200 TAGRAAAAALTDISLKWLAS-KNPQADVEVTPGFDPVQNGQPVVSAGGFVFRKADTTLVD 258

Query: 240 IVSWTHYA-------MVTAEELGITQKNINQVSKDTT 269
             +            +  AE  G T+ N+      T 
Sbjct: 259 AFNGALGTLHQNGQWVQIAEPFGFTKDNLPAADLTTQ 295


>gi|120598103|ref|YP_962677.1| extracellular solute-binding protein [Shewanella sp. W3-18-1]
 gi|120558196|gb|ABM24123.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           W3-18-1]
          Length = 284

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 18/211 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           VS L + IL     S    +L        ++ G N     +A     G   G DVD  RA
Sbjct: 7   VSYLFMFILLTHGVSQAEKLLPC---TNTIRVGYN-NWPPYAWQDPKGQAHGLDVDLMRA 62

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
            +  +  +   + ++ + AK     L++ ++D++      T  R+      F      + 
Sbjct: 63  FALYLGCE---VSFINVPAKRSHQMLKTGELDVMMGA-TMTDARQAY--ALFTVDYRDEE 116

Query: 127 QGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKYHPIVFERV 179
             F           + S + +    + +   ++     ADY +       +Y  ++    
Sbjct: 117 VRFFVLDEQKDLINVESWADIFTRKLRLLVPSSGWYG-ADYHRLQYQLEREYLLVLSPDA 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +        R D   GD  A+  +      
Sbjct: 176 SKSVQMLTYGRGDIILGDAMAVPYIASQYQN 206


>gi|307708788|ref|ZP_07645250.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615154|gb|EFN94365.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 122

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 40/136 (29%), Gaps = 15/136 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L L  +F             I K   +K   +T    F    ++  +KG D
Sbjct: 1   MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    ++     +   IQ           A+Q+ Q D +      T  RE         
Sbjct: 51  VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105

Query: 121 ITYFDGQGFIMHKKKG 136
             Y         K   
Sbjct: 106 TYYDTKVVIATTKAHK 121


>gi|169631314|ref|YP_001704963.1| amino acid ABC transporter substrate-binding protein [Mycobacterium
           abscessus ATCC 19977]
 gi|169243281|emb|CAM64309.1| Putative amino acid ABC transporter, substrate-binding protein
           [Mycobacterium abscessus]
          Length = 309

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 14/190 (7%)

Query: 21  STNASILGDIKKRGFLKC-GINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +   I+KRG L   G              +    G + D    ++  +     ++
Sbjct: 45  AIAAEVPEGIRKRGTLVVTGDANSSPPLRFYADDDKTMIGIETDIAYLVADILG---LRV 101

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKG 136
                +  + F+ + S ++D    N   T  R+      F      D   F   +     
Sbjct: 102 DLRSADWAQNFVKVDSGEVDAFISNVTVTEERKE--KFDFA-TYRLDNVTFEARRSLDWK 158

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCD 192
           +     ++G +I V +GT  E  L  + + +            F++      A  + R D
Sbjct: 159 VKGARDIAGKTIGVGSGTNQEALLVRWNEENVAAGLPAADLKYFQQATGYYLALASGRID 218

Query: 193 AYTGDISALY 202
           AY G   +  
Sbjct: 219 AYVGPNPSAV 228


>gi|302379711|ref|ZP_07268196.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3]
 gi|302312618|gb|EFK94614.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3]
          Length = 526

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 32/227 (14%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--------- 49
           M        SI+ ++++ F   +  +       ++     G+      F           
Sbjct: 1   MKNFTRKLTSIVMILMMMFVFVNNESFA-----EKDTFVIGMEANYAPFNWSQSTDANGA 55

Query: 50  ---VKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
                + G++  G+D+   + ++  +      I+   +       A+ S ++D +     
Sbjct: 56  YPIDNSKGEYANGYDLQIAKKIADNLGKKLVVIK---MEWDGLAPAVMSGKVDAIIAGMS 112

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLAD 162
            T  R+    + F    Y      +  K        S++ L G  I  Q  T     +  
Sbjct: 113 PTKERKE--QIDFSDTYYSSDLVIVTKKDSKYINAKSLNDLKGFKITGQLNTFHYSVIDQ 170

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
                 +       E    + +A  A + D Y  +     + + +N 
Sbjct: 171 IKDCDKLP----AMESFPSMLSAVLAEKIDGYVSEKPQALSAEASNA 213


>gi|167564740|ref|ZP_02357656.1| extracellular solute-binding protein, family 3 [Burkholderia
           oklahomensis EO147]
 gi|167574720|ref|ZP_02367594.1| extracellular solute-binding protein, family 3 [Burkholderia
           oklahomensis C6786]
          Length = 286

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 69/247 (27%), Gaps = 35/247 (14%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   +   +  G   +      G   GF+ +    + + I     +   +  +      
Sbjct: 30  KEWKMVTVALEGGYAPWNLTLPGGKLGGFEPELLADVCARI---KLQCNMVAQDWDGMIP 86

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-------------------- 130
            LQ+ + D+L      T  RE  L   F          F                     
Sbjct: 87  GLQAGKFDVLMDAISITPEREKILA--FSRPYAATPATFAVTNAKVLPRSAANAPALKLT 144

Query: 131 ----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 K    +   QL G +I +Q+GT     + D FK         V++   E D   
Sbjct: 145 GDPKTDKPTVDALRKQLKGKTIGIQSGTVYTKFINDNFK---DIATIRVYKTSPERDLDL 201

Query: 187 RAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A R DA   D++   A     +  S       L   I       A  + D +       
Sbjct: 202 VAGRIDASFDDVTYYAANMAKKENASIMLAGPKLGGPIWGPGEGLAFRKQDADLKTKFDA 261

Query: 244 THYAMVT 250
              A + 
Sbjct: 262 AIGAALA 268


>gi|258514240|ref|YP_003190462.1| extracellular solute-binding protein family 3 [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777945|gb|ACV61839.1| extracellular solute-binding protein family 3 [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 320

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 17/232 (7%)

Query: 24  ASILGDIKKRGFLKCG-INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +  +  I  RG L  G        F  +   G   G D+   + +++ +     +     
Sbjct: 70  SPDIQKILSRGKLIVGLYCNDQPPFFMLNPQGKLYGMDIALAKDIAAKLGV-ALEFNRSA 128

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM------HKKKG 136
               E    +    +D        TL R     ++F        Q  ++       K   
Sbjct: 129 RTFNELTEMVARGDVDTAISVLSRTLDRAKL--ISFTKPYVVLHQALLVNRVEAAKKGIE 186

Query: 137 ISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
              +  L      I V+A T+      + F       H + ++  E++ AA       A 
Sbjct: 187 DYPMDYLKKEDVKIGVKAKTSYVEFARELFPKA----HILEYKEWEDVVAALLKGEVIAA 242

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPA-IIQGDTEWYNIVSWTH 245
             D + +  L       S +  +  +  K       + Q +T   + ++   
Sbjct: 243 VNDENEITQLINKRPNISLYACVYILKDKKDYICMGVSQQNTHLLDWLNTYL 294


>gi|258654464|ref|YP_003203620.1| family 1 extracellular solute-binding protein [Nakamurella
           multipartita DSM 44233]
 gi|258557689|gb|ACV80631.1| extracellular solute-binding protein family 3 [Nakamurella
           multipartita DSM 44233]
          Length = 339

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 70/242 (28%), Gaps = 26/242 (10%)

Query: 21  STNASILGDIKKRGFLKC-GINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  A +  +I+ RG +K  G              +    G +VDF    +  +     ++
Sbjct: 74  AIAAKVPQEIRDRGTIKVTGSAGTAPPLRFYATDDTTLIGSEVDFAYLFADVLG---LRV 130

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKG 136
                +  + F+ + S ++D    N   T  R+      F      D             
Sbjct: 131 DLSAADWSQNFVRVDSGEVDAFISNVTVTEERKE--KYDFA-TYRLDTLALETRIDDPWT 187

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCD 192
           ++    L+G  I V +GT  E  L D+ + +            F+   +   A  + R +
Sbjct: 188 VTDRKDLAGKVIAVGSGTNQEKILVDWNEQNIAEGLAPIDIKYFQNSTDYYLALSSGRIE 247

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            Y G              P+             +      G+     I   T      AE
Sbjct: 248 GYFG------------PNPTAQYHAASTGETKVIGTFSGAGEALQGEIAVLTLKGNGLAE 295

Query: 253 EL 254
             
Sbjct: 296 AF 297


>gi|189912836|ref|YP_001964391.1| ABC transporter substrate binding protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167777512|gb|ABZ95813.1| Substrate binding protein of an ABC transporter complex [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
          Length = 284

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 82/257 (31%), Gaps = 30/257 (11%)

Query: 2   YKDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           Y+ F  + +   +   T      +  L  I+K   L   +N     F     N  + G D
Sbjct: 5   YRKFIWAFVSFTLFASTVLLGQTSPTLEKIRKTKTLTVSVNEFYDPFYIENPNEFYPGLD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT--DWTLLREISLGLAF 118
           V+  +  +  +  D   I        +    L+     I            R++     F
Sbjct: 65  VELAQEYAKFLDVDLKIIPLR--TFDQHARMLEKGDTQIAMAGISSSINRFRDVY----F 118

Query: 119 RPITYFDGQGFIMHK----------------KKGISSVSQLSGASICVQAGTTTELTLAD 162
                      ++++                 + ++ ++ ++G S  V A ++    L +
Sbjct: 119 TDPYLVSTPAALVNRTALPPEPEGQIVTVQLFRNLNDLTNITGISYSVLANSSNHQFLRE 178

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDII 221
            F           +   E   +  + +  +A+  D   + AL   +      ++ +  ++
Sbjct: 179 AFPKA----QVFSYFTNEAALSELKKNNVNAFVADSFFIQALLQKDSSLRANYLPILGVV 234

Query: 222 SKSPLAPAIIQGDTEWY 238
            +  ++ A+ + D E+ 
Sbjct: 235 QEDHISMAVAKRDIEFL 251


>gi|163859197|ref|YP_001633495.1| putative amino acid-binding periplasmic protein [Bordetella petrii
           DSM 12804]
 gi|163262925|emb|CAP45228.1| putative amino acid-binding periplasmic protein [Bordetella petrii]
          Length = 252

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 77/226 (34%), Gaps = 15/226 (6%)

Query: 35  FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +K G  T  V F+ +       +GF +D  +A+       P       ++      +L 
Sbjct: 28  VMKVGTETNGVPFSFLNPATQQMQGFMIDLIQAVGKHAGFTP---AIEAMDFSALISSLT 84

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQ 151
           SK+IDI++     T  R+    + F    Y  G+G I+         S        +  Q
Sbjct: 85  SKKIDIIASAMYITDKRK--QVIDFTRPVYTYGEGMIVPSTDKTDYPSYQPFKDRVVGAQ 142

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT     L    KA  +     V++ +  I     A R +A   D   L +  L   + 
Sbjct: 143 VGTVYVDAL----KAAGIFKEVKVYDTIPAIIRDVNAGRIEAGIADYPTL-SYYLGLGQF 197

Query: 212 SEHVILPDIISKSP--LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               ++    +  P  +   + QGD      +      +  + EL 
Sbjct: 198 PRTRLVQSYKASLPGSIGLGLRQGDDALKQKLQAALDEVKRSGELD 243


>gi|94991752|ref|YP_599851.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS2096]
 gi|94545260|gb|ABF35307.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS2096]
          Length = 154

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 25/160 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M K     ++ L +LF       A+         +L+ G+      F      A+     
Sbjct: 7   MKKLILSCLVALALLFGGMSRAQANQ--------YLRVGMEAAYAPFNWTQDDASNGAVP 58

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++ A+  +   ++    +      AL S +ID+++     T 
Sbjct: 59  IEGTSQYANGYDVQVAKKVAKAMNKELLVVK---TSWTGLIPALTSGKIDMIAAGMSPTK 115

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
            R     ++F    Y      ++      +   +  G   
Sbjct: 116 ER--RNEISFSNSYYTSQPVLVVTANGKYAEAKKPQGFFW 153


>gi|29832825|ref|NP_827459.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Streptomyces avermitilis MA-4680]
 gi|29609946|dbj|BAC73994.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 312

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSA 70
                 ++ S   S L   K  G L    +      + +       KGF+     A++  
Sbjct: 54  ATASGTSAESCAKSTLQT-KTSGKLTIATDEPAYEPWFKDDKPASGKGFESAVAYAVAKQ 112

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +      + +  +   + F A   K  D        +  R+    + F    Y   Q  I
Sbjct: 113 LGYAKGNVVWQSVPFNKAF-APGEKTFDFDINQVSISTERKK--AVDFSSGYYDVRQAVI 169

Query: 131 ---MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                K     SV+ L G  +  Q GTT+   + D  K       P  + + ++  +A +
Sbjct: 170 ALKSSKAAKAKSVADLKGLKLGAQVGTTSLDYINDVVK---PTQEPAAYAKNDQAKSALK 226

Query: 188 AHRCDAYTGDISA 200
             + DA   D+  
Sbjct: 227 NGQVDAIVVDLPT 239


>gi|284033079|ref|YP_003383010.1| extracellular solute-binding protein family 3 protein [Kribbella
           flavida DSM 17836]
 gi|283812372|gb|ADB34211.1| extracellular solute-binding protein family 3 [Kribbella flavida
           DSM 17836]
          Length = 287

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 84/263 (31%), Gaps = 27/263 (10%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +     L    K G L    +     F   +      GFDVD    L++ +  +   + 
Sbjct: 49  AAAAGITL---VKPGKLTVCTHLPYKPFQYKEGT-KVVGFDVDLLDLLANDLGIEQEVVN 104

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
                      A ++++ D+       T  R+ ++ +          Q  ++ K     S
Sbjct: 105 IEW-AQVTSGAAFKARKCDMGMGAMTITPERQAAISI--TAPYMNASQVLLVKKDAPYKS 161

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           ++ L G  + VQA TT +       K H      + F  +       ++ R DA   D  
Sbjct: 162 LADLKGKKVGVQADTTGKDFADKQSKVHGF--EVLTFSDLALQGNNLKSGRVDAAINDNG 219

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            LY     N    +  ++ +  +      A ++  +    +  +                
Sbjct: 220 VLYDFVKANP---DTAVVTEFDTGEQYGFAALKDGSGPKLVEKFNTL------------- 263

Query: 260 NINQVSKDTTNPDV-QRFLGIDK 281
            + Q   D    ++ +R+ G++ 
Sbjct: 264 -LAQAKTDGKYDEIYKRWFGVEP 285


>gi|222081154|ref|YP_002540517.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725833|gb|ACM28922.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 282

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 79/253 (31%), Gaps = 24/253 (9%)

Query: 1   MYKDFFVSILC----------LIILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAE 49
           M +  F  ++           L        + + S    I+    L+  GI      + +
Sbjct: 2   MKRRDFAGLIGVAATGAAAVALSTPALAQTAPDESTFDRIRNSKKLRVAGIVGTEPYYHK 61

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
             A G+W GF +   R L+ ++    ++++          L LQSK+ID +      T  
Sbjct: 62  DIATGEWSGFCMSMARDLAKSM---EAEVEISETTWGNAVLDLQSKKID-IMFGLSPTPS 117

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAH 167
           R  +L + F      +    I        +  +L+     + V  G+T +L         
Sbjct: 118 R--ALVVEFTRPIMQNTFTVIAKPGLEPKTWDELNKPEIRVAVDIGSTHDLFARRVLPQA 175

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 +  +  +E   + +A   D                      + +P  I + P  
Sbjct: 176 ----TLVALKTADEATLSVQAGHADLVIQVAMLSLVTIKKIPN-LGKIFVPTPIIRQPTC 230

Query: 228 PAIIQGDTEWYNI 240
             +   D+  +  
Sbjct: 231 AGVRVEDSARFRT 243


>gi|126175938|ref|YP_001052087.1| chorismate mutase [Shewanella baltica OS155]
 gi|125999143|gb|ABN63218.1| chorismate mutase / cyclohexadienyl dehydratase [Shewanella baltica
           OS155]
          Length = 421

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 17/212 (8%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I     L  G       F+  +A G  KG D+D    L+ ++        +LP +
Sbjct: 193 STLDKIIAEKILYVGTTGDYEPFSYFEA-GQIKGIDIDLANRLADSLGAQA---VFLPTS 248

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143
                  L S++ DI+       L R+     +   +        +  KK+   S++++ 
Sbjct: 249 WSNLITDLSSERFDIMMSGISKQLFRQRVGLQSDIYLEDGKTPISLCAKKERYDSLAKID 308

Query: 144 -SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
                + V  G T +  +     A+  +    V      I     A+R D    D   + 
Sbjct: 309 KPDTRMIVNKGGTNQRFV----DANIKQAKITVHSSNVTIFQELIANRADVMITDRVEVQ 364

Query: 203 AL-------KLTNDRPSEHVILPDIISKSPLA 227
                      T      +     ++ + P+ 
Sbjct: 365 LQTKKHTELCSTMPNNLNYSAKAFLMGRDPIW 396


>gi|325063244|gb|ADY66934.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 286

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 59/210 (28%), Gaps = 17/210 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            S+   +I      +        I      K G L    +  L   A     G  KG  +
Sbjct: 17  TSLAGFVISLLAGAAVAQDCTPKISNDHLIKPGHLVMATSPTLPPMAYADQQGVLKGLRI 76

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    ++  +   P    Y+          LQ  + D+++     T  R     + F   
Sbjct: 77  ELGYEIAKRLCLKPE---YISTEYATMVPGLQGGRWDMINAGLFVTAER---RKILFMIP 130

Query: 122 TYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTE---LTLADYFKAHN-MKYHPIV 175
                          + I+ V  L+G ++    G   E     L + FK          +
Sbjct: 131 YESLAISISTAVGASEPITKVDDLAGKAVSTDIGGYAERKIKELNEDFKKRGLAPMTINL 190

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALK 205
           F+    +  A RA +  A           +
Sbjct: 191 FDNYATVYQALRAGQVQAAVSIDPVAKQYQ 220


>gi|311898353|dbj|BAJ30761.1| putative amino acid ABC transporter substrate-binding protein
           [Kitasatospora setae KM-6054]
          Length = 328

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 98/286 (34%), Gaps = 34/286 (11%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVG---FAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  A +  +I++RG L+     G V    F          G + D    +   +     K
Sbjct: 64  AIAALVPDEIRRRGTLQVAAAAGTVPPLVFYATDDK-TVIGNETDIAYLVGDVLG---LK 119

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KK 135
           ++  P + +  F+ L S + D+   N   T  R+      F      D  GF   K    
Sbjct: 120 VELNPSSWENVFVGLDSGKYDVGITNITVTEARKE--KYDFA-TYRLDNLGFEAKKGGSW 176

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKY-HPIVFERVEEIDAAYRAHRC 191
            I   + ++G +I V +GT  E  L D+      + +K      F+   +   A  + R 
Sbjct: 177 KIKGPADVAGHTIGVSSGTNQEKLLLDWSAQDVKNGLKPVDVKYFQTSSDYYLALGSGRI 236

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           DA+ G              P+             +      GDT    I + T       
Sbjct: 237 DAWLG------------PNPATAFHAVQTGETEVIGTYSGGGDTVLGKIGATTKKDNGLV 284

Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL---GLTKD 294
           + L      +N++ K  +  +V +  G+DK +     +   GL K 
Sbjct: 285 KALN---AALNEIIKGGSYGEVLKRWGLDKEAVQTSEINPPGLPKT 327


>gi|146293826|ref|YP_001184250.1| extracellular solute-binding protein [Shewanella putrefaciens
           CN-32]
 gi|145565516|gb|ABP76451.1| extracellular solute-binding protein, family 3 [Shewanella
           putrefaciens CN-32]
          Length = 284

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 18/211 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           VS L + IL     S    +L        ++ G N     +A     G   G DVD  RA
Sbjct: 7   VSYLFMFILLTHGVSQAEKLL---PCTNTIRVGYN-NWPPYAWQDPKGQAHGLDVDLMRA 62

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
            +  +  +   + ++ + AK     L++ ++D++      T  R+      F      + 
Sbjct: 63  FALYLGCE---VSFINVPAKRSHQMLKTGELDVMMGA-TMTDARQAY--ALFTVDYRDEE 116

Query: 127 QGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKYHPIVFERV 179
             F           + S + +    + +   ++     ADY +       +Y  ++    
Sbjct: 117 VRFFVLDEQKDLINVESWADIFTRKLRLLVPSSGWYG-ADYHRLQYQLEREYLLVLSPDA 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +        R D   GD  A+  +      
Sbjct: 176 SKSVQMLTYGRGDIILGDAMAVPYIASQYQN 206


>gi|262275663|ref|ZP_06053472.1| putative extracellular solute-binding protein [Grimontia hollisae
           CIP 101886]
 gi|262219471|gb|EEY70787.1| putative extracellular solute-binding protein [Grimontia hollisae
           CIP 101886]
          Length = 277

 Score = 76.7 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 79/258 (30%), Gaps = 12/258 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++  L ++  T+      +   I     ++ G     V +A    N    GF 
Sbjct: 1   MLKRISTALSVLAMIAGTA--AAGPLQARIDDGKTIRIGF-ANEVPWAYPGDNNAPLGFA 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                 + +A+    + I+ +          L++ + D+++        R     + F  
Sbjct: 58  NAHTIGVLNAMG--YTNIEPVVTEWGGLIPGLKAGRFDLITGGMYILNSR--CNNIEFSE 113

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                G  FI+ K     I +   L   +  +  G      +    K        +    
Sbjct: 114 PMGQFGDAFIVQKGNPKGIQNYQDLKNKNARLVTGAGYNS-VEAAKKEGVPDSQVMQVPG 172

Query: 179 VEEIDAAYRAHRCD--AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             EI AA R  R D  A T   +   A +                + + +       D++
Sbjct: 173 PTEILAAVRVGRADAGAVTYFTALNLAKQSNGAVEVTDPSALPEWTLNYVGIGFRPEDSD 232

Query: 237 WYNIVSWTHYAMVTAEEL 254
           +    +    A + +E++
Sbjct: 233 FLKAFNKAQAAYIGSEKM 250


>gi|218439949|ref|YP_002378278.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
 gi|218172677|gb|ACK71410.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
          Length = 243

 Score = 76.7 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 68/215 (31%), Gaps = 12/215 (5%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +    V F     + +  G  +D    +       +  +   ++        RF  ++  
Sbjct: 1   MREDAVPFGYEDLDNNLSGICLDVINLIKERVQEELNQEIILVKLFQSTLFNRFELIKDG 60

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAG 153
            + +           +  L +AF    +  G  FI+         +   L+  ++ V   
Sbjct: 61  VVYLECGPNTIRESPD--LEVAFSAPFFVTGTQFIIPSGLENRFDADSSLADFTLGVLRN 118

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK--LTNDRP 211
           TTT+  LA  +    ++              A +  R DA+  D   L           P
Sbjct: 119 TTTQQLLASRYPQATIQ-EFQGITGRLRGIQAVQTGRIDAFASDGILLIGEATLQGLPIP 177

Query: 212 SEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTH 245
            ++V++P   +        + + D +W  +V+   
Sbjct: 178 EDYVLVPQPPLDCEYYGLILPKNDPQWRELVNSVI 212


>gi|319427198|gb|ADV55272.1| extracellular solute-binding protein family 3 [Shewanella
           putrefaciens 200]
          Length = 284

 Score = 76.7 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 18/211 (8%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           VS L + IL     S    +L        ++ G N     +A     G   G DVD  RA
Sbjct: 7   VSYLFMFILLTHGVSQAEKLL---PCTNTIRVGYN-NWPPYAWQDPKGQAHGLDVDLMRA 62

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
            +  +  +   + ++ + AK     L++ ++D++      T  R+      F      + 
Sbjct: 63  FALYLGCE---VSFINVPAKRSHQMLKTGELDVMMGA-TMTDARQAY--ALFTVDYRDEE 116

Query: 127 QGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKYHPIVFERV 179
             F           + S + +    + +   ++     ADY +       +Y  ++    
Sbjct: 117 VRFFVLDEQKDLINVESWADIFTRKLRLLVPSSGWYG-ADYHRLQYQLEREYLLVLSPDA 175

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +        R D   GD  A+  +      
Sbjct: 176 SKSVQMLTYGRGDIILGDAMAVPYIASQYQN 206


>gi|148270701|ref|YP_001245161.1| metal dependent phosphohydrolase [Thermotoga petrophila RKU-1]
 gi|147736245|gb|ABQ47585.1| metal dependent phosphohydrolase [Thermotoga petrophila RKU-1]
          Length = 618

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 12/220 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           +  ++     F+    NG+  G  VDF +        +   ++ +P+        L   +
Sbjct: 24  RIALDEDYAPFSFYDENGNLIGISVDFWKLFPEKTGVE---VELVPVKWYRAQELLTEGK 80

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           ID + +        E    L+F    +         K   I   S LS   +    G   
Sbjct: 81  IDAIDQ---IFKTPEREEALSFSRPIFEMRSCVFFRKDLPIRDFSDLSSYVVGALRGEGA 137

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
             TL    +  N       F     I  A +  +   + GD           D   E   
Sbjct: 138 VETL----REKNPDVEFEFFNDYSSIAKALKEKKISVFLGDDIVARYYLSKEDLLPEFRT 193

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           L   +  + L  A+++G+    ++++     +   E+  I
Sbjct: 194 L--HLETNYLHVAVLKGNESVLSLINSGLNRISEGEKNDI 231


>gi|293395295|ref|ZP_06639580.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Serratia odorifera DSM 4582]
 gi|291422252|gb|EFE95496.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Serratia odorifera DSM 4582]
          Length = 320

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 79/251 (31%), Gaps = 16/251 (6%)

Query: 34  GFLKCG--INTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           G L     +      F    + N    G + D  R ++  +     K++ +P   ++  L
Sbjct: 70  GTLTVALAVLGSAPPFGLYARDNKTVIGSEADIARLVADGLG---LKLKVVPAAWEDWPL 126

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGAS 147
            + S + D    N   T  R+      F      D  GF +    K   I+S + ++G  
Sbjct: 127 GVASGKYDAAIYNITVTKERKT--KFDFA-TYRQDTLGFYVKTTSKITKINSAADIAGKR 183

Query: 148 ICVQAGTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I V +GT  E  L  + K +  K      P           A ++ R DA  G       
Sbjct: 184 IIVGSGTNQEAVLLAWDKQNQAKGLPALIPQYVTDDAAATLAIQSGRADATFGPNVTGAY 243

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
             L   +      +P     +      ++      N V  +  + + +           +
Sbjct: 244 KALLTGKTRLVGTVPGGWPNTANIAVTLKKGNGLVNAVQASLNSAIASGAYLKVLDRWGE 303

Query: 264 VSKDTTNPDVQ 274
             +   + ++ 
Sbjct: 304 SIEKIDHSEIN 314


>gi|171315679|ref|ZP_02904913.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171099211|gb|EDT43984.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 280

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 18/276 (6%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L+ L F      A+ L  ++  G L  G +     +A ++A G   GFD +F R L+  
Sbjct: 14  ALVPLAFACSFAAAAPLQTVR-PGTLLVGSDLTYPPYAYLEA-GKPAGFDAEFSRLLARH 71

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +P    +L     +  L +++++ D+++     T   +    + F P     G   +
Sbjct: 72  LKLEP---VFLDTRFPDLILGMKARRFDVVASALYVTP--DRVKQVDFVP-YLKTGASLL 125

Query: 131 MHKKKGI--SSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKY-HPIVFERVEEID 183
           + K       +   L G  +    G +    L     D  KA        + F    E  
Sbjct: 126 VAKGSAFLPKTPRDLCGKRVGSIKGASWTPKLRAVSQDTCKAAGRGEIAILEFPTSPEAT 185

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A  +   D    D +               +    ++    +   + +GD+     +  
Sbjct: 186 SALMSKAVDVQIEDAAVAQG-IPKQTNGRVDISSTTLLYPIVIGLGMTKGDSGLQGALEG 244

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
               +  + E G   K      ++ T  DV   LG 
Sbjct: 245 ALNDVKRSGEYGSLVKKYG--LQEPTAADVANALGT 278


>gi|119476545|ref|ZP_01616896.1| transglycosylase, SLT family protein [marine gamma proteobacterium
           HTCC2143]
 gi|119450409|gb|EAW31644.1| transglycosylase, SLT family protein [marine gamma proteobacterium
           HTCC2143]
          Length = 752

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 74/224 (33%), Gaps = 14/224 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             +IKKR  L+  +       +     G   GFD +  +A +    ++      +P + +
Sbjct: 300 WQEIKKRKHLRVALRNNSA--SYFLWRGKLLGFDYELIKAFAEK--NELLIDVIVPPSHE 355

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSG 145
           +    ++S + DI +     T  R     + F    ++  +  +  K++G +     LSG
Sbjct: 356 KLIDYVRSGKADIAAGFLSITDGR-KQDNVVFSNPYHYASELIVEKKEQGKNMAIDDLSG 414

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERV---EEIDAAYRAHRCDAYTGDISALY 202
            +I V+  +    T+        +  + +        EE  A   +   D    D   L 
Sbjct: 415 RTIHVRRSSNYWKTIKQL--QKQVAVNLVATPENEETEEAIAKVASGEYDLTVADNHILD 472

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                       ++L   +       A+ + +      ++    
Sbjct: 473 IELTWRKDVHSAMVLGAPLH---QGWAVRESNPALLKALNQFIT 513


>gi|150403715|ref|YP_001331009.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150034745|gb|ABR66858.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 246

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 21/246 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +  L ++     +       +I+    +  GI   +  +     NG+ KGF+
Sbjct: 1   MNPLPLAVVAALFVVGMCIITP------EIQNNDCIIVGIYPHMPPYQYY-KNGELKGFE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKE-RFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +D    L   +      I ++  N K   +LA +S  +D        T  RE  +  +  
Sbjct: 54  IDLINELGRRMDKK---IIFVETNYKYGNYLAGKSGNVDFSISAITKTTQRENDVVFSDI 110

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +  +        K   +   +      I   A +T E    DY K+  M +  I ++  
Sbjct: 111 YMYSYCSLITNDKKYTKL---TDFRDKKIGALADSTFEDLAEDYLKS--MNFELIRYDNF 165

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           + + +   A   D    D          N        L + +          + + +  +
Sbjct: 166 QSMHSDLLADNLDGAFTD-----YRYHLNTDDKTGPYLVENLEIHYFGVVSSKDNKDLID 220

Query: 240 IVSWTH 245
            ++   
Sbjct: 221 EINMEL 226


>gi|259507193|ref|ZP_05750093.1| glutamate periplasmic binding protein [Corynebacterium efficiens
           YS-314]
 gi|259165233|gb|EEW49787.1| glutamate periplasmic binding protein [Corynebacterium efficiens
           YS-314]
          Length = 285

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 58/200 (29%), Gaps = 11/200 (5%)

Query: 56  WKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G +VD       A++     +  +I +    A +R   +Q+ ++ +++        R 
Sbjct: 1   MSGLEVDISTYVVNAIADDNGWEHPEITWRETPAAQRETFIQNGEVAMIAATYSINQAR- 59

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
               + F        Q  ++        +  +   +  +   +T     +   K      
Sbjct: 60  -LDTVNFGGPFLVTHQALMVP--DEDDRIQDMDDLNNDLILCSTAGSVPSQRAKEAIPGL 116

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAP 228
               ++       A      DA T D + LY            V +    +  +      
Sbjct: 117 QLQEYDTPSSCIEALDQGSVDAITTDATILYGYAQYYPGDFRIVEMTRDGEQFTDEYYGI 176

Query: 229 AIIQGDTEWYNIVSWTHYAM 248
            + +GD +    ++     M
Sbjct: 177 GLAKGDEDGTEAINTALQEM 196


>gi|54307982|ref|YP_129002.1| Slt family transglycosylase [Photobacterium profundum SS9]
 gi|81615472|sp|Q6LU25|MLTF_PHOPR RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|46912408|emb|CAG19200.1| putative transglycosylase, Slt family [Photobacterium profundum
           SS9]
          Length = 514

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 14/242 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +++ F   L L +L    +  +    L  I++ G ++ G        +    N    G D
Sbjct: 11  FRELFTVALVLALLSGCQWQDDNLTDLEKIRESGVIRVGTLNNQ--LSYYIGNDGPTGLD 68

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  +  +  +           L+    F  L+   ID+++        ++        P
Sbjct: 69  YELAQRFAQKLGVKLEMQPMFTLSG--LFPTLERGGIDVVAAGLTI--SKDRIENYHAAP 124

Query: 121 ITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVF 176
             Y+  Q  +      +    +   L+  ++ V  G++ E  L    + H ++ +  I  
Sbjct: 125 AYYYASQIVVYKNGQWRPRKPADLALNKGTLSVVKGSSHEKHLIKLKEIHPDLTWESIEE 184

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              +E+         D +T   S   AL        +  I  ++    P+A  + +   +
Sbjct: 185 TDSDELLRLVAKGELD-FTIADSVDVALSQRIH--PDVAIAMELTEDEPIAWFVNKSTDD 241

Query: 237 WY 238
             
Sbjct: 242 SL 243


>gi|330428742|gb|AEC20076.1| periplasmic amino-acid binding protein y4tE of ABC-transporter
           [Pusillimonas sp. T7-7]
          Length = 301

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 5/195 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +   +A+ L +IK RG ++  +    + +  +  +G+ KG   +  + +   +    
Sbjct: 34  GGLASQASAASLQEIKDRGTVRIAV-ANEIPYGYMDLSGEAKGVGPETAQHIMEQLGIKE 92

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I+++  N       LQ+ + D++S        R   +  +    +Y +G         
Sbjct: 93  --IEWVTTNFGSLIPGLQANRFDMVSAEMAILPQRCKEVLFSEPNSSYGEGLLVAQGNPD 150

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            + +    + +   V A       L             +      +  +     R  AY 
Sbjct: 151 NVHTYEDFAKSDKKV-AIMAGADQLEMLQALGVPGERMVTISNNADAISTVSTGRAAAYA 209

Query: 196 GDISALYALKLTNDR 210
              S   +       
Sbjct: 210 AT-SLTVSELAKKSD 223


>gi|183222804|ref|YP_001840800.1| ABC transporter periplasmic protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|167781226|gb|ABZ99524.1| ABC-type transport system, periplasmic component; putative signal
           peptide [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Paris)']
          Length = 284

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 83/257 (32%), Gaps = 30/257 (11%)

Query: 2   YKDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           Y+ F  + +   +   T      +  L  I+K   L   +N     F     N  + G D
Sbjct: 5   YRKFIWAFVSFTLFASTVLLGQTSPTLEKIRKTKTLTVSVNEFYDPFYIENPNEFYPGLD 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT--DWTLLREISLGLAF 118
           V+  +  +  +  D   I        +    L+     I            R++     F
Sbjct: 65  VELAQEYAKFLDVDLKIIPLR--TFDQHARMLEKGDTQIAMAGISSSINRFRDVY----F 118

Query: 119 RPITYFDGQGFIMHK----------------KKGISSVSQLSGASICVQAGTTTELTLAD 162
                      ++++                 + ++ ++ ++G S  V A ++    L +
Sbjct: 119 TDPYLVSTPAALVNRTALPPEPEGQIVTVQLFRNLNDLTNITGISYSVLANSSNHQFLRE 178

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDII 221
            F           +   E   +  + +  +A+  D   + AL   +    + ++ +  ++
Sbjct: 179 AFPKA----QVFSYFTNEAALSELKKNNVNAFVADSFFIQALLQKDSSLLANYLPILGVV 234

Query: 222 SKSPLAPAIIQGDTEWY 238
            +  ++ A+ + D E+ 
Sbjct: 235 QEDHISMAVAKRDIEFL 251


>gi|259415982|ref|ZP_05739902.1| extracellular solute-binding protein, family 3 [Silicibacter sp.
           TrichCH4B]
 gi|259347421|gb|EEW59198.1| extracellular solute-binding protein, family 3 [Silicibacter sp.
           TrichCH4B]
          Length = 263

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 63/241 (26%), Gaps = 17/241 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M + F +S L   I    +F+ +   L        +             +  N G+  G+
Sbjct: 1   MTRTFALSALATAIFATGAFAADLPDLEG----REVVFATENTYPPLQFIDPNSGEAIGW 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D    ++  +      + Y   +      A+ + Q DI           +    + F 
Sbjct: 57  EYDAVAEIAQRL---NMTVVYENTSWDAMIPAITASQYDIAMNGITI--RDDRKEKVDFS 111

Query: 120 PITYFDGQGFI-----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                     I               +     +      T   +T+ D            
Sbjct: 112 DSYLTSQMRMIVAGDEDRFADAAGFAADEDLLAAAQPGTTPFYVTVYDVLDGDEANPRIK 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +FE       A RA   D    D +A   +   +D      I+ + +          +G 
Sbjct: 172 LFETFGASLQALRAGDVDLALSDSTAAAGVVAASD--GAFKIVGEPLGTEDFGFIFPKGS 229

Query: 235 T 235
            
Sbjct: 230 D 230


>gi|296272955|ref|YP_003655586.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097129|gb|ADG93079.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 265

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 15/196 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F + +  + I F    ++             +     +  +  + +  +G   G +
Sbjct: 1   MKKLFKLLVTGIFISFMHVNASETPS--------KIVVASGSTSIPNSYI-IHGKHTGHE 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    +S        K++++       F  L SK+ D +         R       F  
Sbjct: 52  VDIWNEISKKTG---LKVEFITGEFNTLFGYLDSKKADTVGNTITVNKRR--LEKYDFSE 106

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  +   +   +  I  +  ++G +    AG+          K   +K + I ++  
Sbjct: 107 PYAYIPEKLIVHPNRTDIKKLKDIAGMTCGFSAGSNGGNLFEQIAKKKGIKINMISYDSS 166

Query: 180 EEIDAAYRAHRCDAYT 195
           E ++ A+R  + D   
Sbjct: 167 ELLNEAFRRGKVDVMI 182


>gi|218778761|ref|YP_002430079.1| Lytic transglycosylase catalytic [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760145|gb|ACL02611.1| Lytic transglycosylase catalytic [Desulfatibacillum alkenivorans
           AK-01]
          Length = 558

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 16/230 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD------PSKIQY 80
           L +I++RG L+  I+ G   F    ++G+ +GF+ +  R     +  D      P ++ +
Sbjct: 131 LDEIRERGVLRVLISMGRTNFFF--SHGEIRGFEYELFREFEKEVNKDLSPSQRPIRVFF 188

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P    E    L     D+++     T  R          I   +    +  + K ++S+
Sbjct: 189 IPTPFDEMMDKLNQGLGDVVAAGMTITPERSKKARFTQPYIRNVNEVVVVNREVKNLNSL 248

Query: 141 SQLSGASICVQAGTTTELTLAD---YFKAHNMKYHPIVFERV----EEIDAAYRAHRCDA 193
             LSG  + V+ G++    L        A+ +    IV        ++I     +     
Sbjct: 249 EDLSGRQVYVRPGSSYSEHLNKLNASLAANKLPPIKIVRGDPSLNTDDILELVNSGVIKI 308

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              D                H  L        +A A+ +   +    ++ 
Sbjct: 309 TVADSHIATLWARALPDIRVHEDLAVNTGGK-IAWAVRKDTHQLRAELND 357


>gi|213691899|ref|YP_002322485.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|213523360|gb|ACJ52107.1| extracellular solute-binding protein, family 3 [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 308

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 84/282 (29%), Gaps = 25/282 (8%)

Query: 1   MYK----DFFVSILCLIIL------FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M +               +               + +    +   +  G+          
Sbjct: 19  MRRGFRSRLMAGFAAAFGMILPLSGLAGCGQIQVTTVSGAPEGPTIAIGVAADEPSVGAW 78

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G ++GFD+   + +++ +     +I +  +  + R   L + Q+D++  +   T   
Sbjct: 79  -HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDNGQVDMVVASWPITDG- 136

Query: 111 EISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYF 164
             S  + F         G ++             SV  +   ++C   G  T       F
Sbjct: 137 -SSAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTVCAVKGDETVGI----F 191

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +          +   A +    DA   D++ L  L        +++ +     + 
Sbjct: 192 RGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGL--QAANGPQYMDVIADKGEV 249

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               A+ QG ++    ++     MV        +      +K
Sbjct: 250 SYGIAVSQGISQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 291


>gi|328955033|ref|YP_004372366.1| extracellular solute-binding protein family 3 [Coriobacterium
           glomerans PW2]
 gi|328455357|gb|AEB06551.1| extracellular solute-binding protein family 3 [Coriobacterium
           glomerans PW2]
          Length = 348

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 83/267 (31%), Gaps = 35/267 (13%)

Query: 1   MYKDFFVSILCLII----LFFTSFS--------TNASILGDIKK-----RGFLKCGINTG 43
           M      S +CL      L     S          +     +        G L  G+NT 
Sbjct: 33  MKSHIVRSGVCLCAMVCALSMGGCSLLTPTISDAQSKTHATVSDMMLVRSGTLTVGLNTS 92

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
               A + + G+  G+ VD  R+++  +     K+ +  +NA     AL  K+IDI    
Sbjct: 93  DAPQAMMDSRGELNGYTVDVARSIAERLG---LKVSF--VNASSPGSALSEKKIDIYLG- 146

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLA 161
              T     S  L               H  +   S+S   LSG S+ VQ  + ++  L 
Sbjct: 147 ---TQPDARSDALKVSASYLTSAVSLFGHDAQEARSLSAADLSGVSVGVQDASASQRVLT 203

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                  +      F+ V E   A  A + D    + +A   L            +  I 
Sbjct: 204 HT----GITSKITTFKNVNECFEALAAGKVDYVACEATAGAYLARQYSG---LGFVAAIA 256

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           S       +     +    V+    ++
Sbjct: 257 SPKEYDILLRSTSIDLSERVTKVVDSI 283


>gi|307609874|emb|CBW99398.1| hypothetical protein LPW_11751 [Legionella pneumophila 130b]
          Length = 231

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 73/224 (32%), Gaps = 12/224 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I K G L          F     +    GFD D  + +   +     +I+Y   N  + F
Sbjct: 2   ILKAGKLLVATAYPDPPFDIEPGD----GFDGDLIKEICRILNLQLVQIKYEGENFNDIF 57

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGAS 147
           L L +K+ D++   T  T  R  S  + F        QG  ++ +    +SS   L G  
Sbjct: 58  LGLANKEYDVVISGTTITPNR--SKQVLFSNPYLEFNQGIAVNTELKPNVSSFEDLKGLV 115

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
             +Q G T++    +  + +         +  +E       A +          +  L  
Sbjct: 116 AGIQKGNTSDEVAQNLLRKNILSDIKYYAYNEIELAIQDLSAGKIGLVIKLYPVISCLIR 175

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    +     +   L  A+ + + +  + V+     ++ 
Sbjct: 176 NYTN---LAVPLQAETHEKLGIAVAKDNFKLRDKVNLILAELIQ 216


>gi|153010786|ref|YP_001372000.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562674|gb|ABS16171.1| Ectoine/hydroxyEctoine ABC transporter solute-binding protein
           [Ochrobactrum anthropi ATCC 49188]
          Length = 287

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 79/242 (32%), Gaps = 12/242 (4%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            + A  + D+K  GF++ G     V +  + A+G  KG   D   A+   +  +   + +
Sbjct: 23  PSQAVTIDDLKSAGFVR-GATANEVPYGYMDASGAAKGIGPDVAAAIFKKLGIEE--VDW 79

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138
                      L++K+ + ++      +L +    + F       G+G ++ K     I 
Sbjct: 80  TVTPFGSLIPGLKAKRFEFVAAE--QNVLPDRCKQVQFTVANSSYGEGLLVPKGNPKNIH 137

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S   +        A  +    +         +   ++ +   +  +  +  R DAY    
Sbjct: 138 SYDDIKKDPSLKVAIVSGADQIDFLHGMGIDESQIVMIQGNADAPSTVQTGRADAYAATE 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEE 253
             +  L   + +  +     D +          A +    D E+Y+  +         ++
Sbjct: 198 LTVAKLVENSPQLEQAHPFTDPVVDGKSARSFGAFSFRPEDKEFYDAFNKELIEFKKTDD 257

Query: 254 LG 255
             
Sbjct: 258 YK 259


>gi|312132625|ref|YP_003999964.1| hisj3 [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773573|gb|ADQ03061.1| HisJ3 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 308

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 86/282 (30%), Gaps = 25/282 (8%)

Query: 1   MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKRG-----FLKCGINTGLVGFAEV 50
           M + F   ++      F      S       +      G      +  G+          
Sbjct: 19  MRRGFRSRLMAGFAAAFGVILPLSGLAGCGQIQVTTVSGAPEGPTIAIGVAADEPSVGAW 78

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G ++GFD+   + +++ +     +I +  +  + R   L + Q+D++  +   T   
Sbjct: 79  -HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDNGQVDMVVASWPITDG- 136

Query: 111 EISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYF 164
             S  + F         G ++             SV  +   ++C   G          F
Sbjct: 137 -SSAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTVCAVKGDEAVGI----F 191

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           + ++ +          +   A +    DA   D++ L  L        +++ +     + 
Sbjct: 192 RGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGL--QAANGPQYMDVIADKGEV 249

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               A+ QG ++    ++     MV        +      +K
Sbjct: 250 GYGIAVSQGTSQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 291


>gi|15643926|ref|NP_228975.1| ABC transporter periplasmic substrate-binding protein [Thermotoga
           maritima MSB8]
 gi|4981719|gb|AAD36245.1|AE001774_2 ABC transporter, periplasmic substrate-binding protein/conserved
           hypothetical protein [Thermotoga maritima MSB8]
          Length = 618

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 12/221 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+  ++     F+    NG+  G  VDF +  S     +   ++ +P+        L  K
Sbjct: 23  LRIALDEDYAPFSFYDENGNLVGISVDFWKLFSEKTGVE---VELVPVKWYRSQELLTEK 79

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID +      T  RE    L+F    +         K   I   S LS   +    G  
Sbjct: 80  KIDAI-DQIFKTPEREKV--LSFSRPIFEMRSCVFFRKDLPIKDFSDLSSYVVGALRGEG 136

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +  TL +     N       F+    I  A +  +   + GD  A        +   E  
Sbjct: 137 SVKTLLE----KNPDVEFEFFDDYSSIVKALKEKKISVFLGDDIATRYYLSKGNLLPEFR 192

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
            L   +  + L  A+++G+    ++++     +   E+  I
Sbjct: 193 TL--HLETNYLHVAVLKGNESVLSLINSGLSRISEGEKNDI 231


>gi|241113569|ref|YP_002973404.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861777|gb|ACS59443.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 282

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 86/264 (32%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   + +S   L +L  T+ S  ++    L  +K++GF +  I      F  V A+G   
Sbjct: 1   MKTRYLLSAASLSVLLITAASPASAADDKLEQLKEQGFARIAI-ANEPPFTAVGADGKVS 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   D  RA+   +                    LQ+ + D ++        R     +A
Sbjct: 60  GAAPDVARAIFEKLGVKEVVASIS--EYGAMIPGLQAGRHDAITAGLFMKPER--CNAVA 115

Query: 118 FRPITYFDGQGFIMHKKKGI-----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +      D + F + K   +       ++    A I    G T E       +A   +  
Sbjct: 116 YSEPILCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEEKLA---LEAGVPRDR 172

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            IV    +      +  R D Y+  + +++ L    + P+   + P + +       A  
Sbjct: 173 VIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFR 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D    +        +  + E  
Sbjct: 233 KQDVALRDAFDVELKKLKESGEFA 256


>gi|281501012|pdb|3KZG|A Chain A, Crystal Structure Of An Arginine 3rd Transport System
           Periplasmic Binding Protein From Legionella Pneumophila
 gi|281501013|pdb|3KZG|B Chain B, Crystal Structure Of An Arginine 3rd Transport System
           Periplasmic Binding Protein From Legionella Pneumophila
 gi|281501014|pdb|3KZG|C Chain C, Crystal Structure Of An Arginine 3rd Transport System
           Periplasmic Binding Protein From Legionella Pneumophila
 gi|281501015|pdb|3KZG|D Chain D, Crystal Structure Of An Arginine 3rd Transport System
           Periplasmic Binding Protein From Legionella Pneumophila
          Length = 237

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 12/188 (6%)

Query: 36  LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G +     F      N    GFD+D  + +   +    +   +      + F AL++
Sbjct: 5   LTIGTSKFNPPFEVWSGNNSSLYGFDIDLXQEICRRL---HATCTFEAYIFDDLFPALKN 61

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +++D++  +   T  R+      F          +I      IS+   L G  I V+ GT
Sbjct: 62  REVDLVIASXIITDERKKH--FIFSLPYXESNSQYITTVDSKISTFDDLHGKKIGVRKGT 119

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                +     + N     I +E +++       ++ DA   D     A       P  +
Sbjct: 120 PYARQVL----SENRNNQVIFYELIQDXLLGLSNNQVDASLXDYE--AAKYWXASEPYAY 173

Query: 215 VILPDIIS 222
            ++     
Sbjct: 174 KLIGKKYK 181


>gi|157370603|ref|YP_001478592.1| extracellular solute-binding protein [Serratia proteamaculans 568]
 gi|157322367|gb|ABV41464.1| extracellular solute-binding protein family 3 [Serratia
           proteamaculans 568]
          Length = 304

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 69/248 (27%), Gaps = 18/248 (7%)

Query: 13  IILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSA 70
             +  ++       L   IKK G++  G N         +A+     G ++D   A++  
Sbjct: 36  AAVKASADPALHDSLPEAIKKTGYIVAGTNPNTPPTTFYEADNKTLAGREIDVMSAIADR 95

Query: 71  IFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           +      I +            L+S + D+   N D    R     + F           
Sbjct: 96  LG---VAIHWKDTGGFDNIIPGLKSGRYDVALANIDANKKR--FQQVDFVGYYNASKLAL 150

Query: 130 IMHKKKGISSVSQ---LSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEI 182
           I  K   +   +    L G ++   AGT+    L                  +F      
Sbjct: 151 IARKDAALGPYTDLAQLCGQTVGAGAGTSQITRLQQASEQCVSGGKPAITIPIFPDRPAG 210

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A  + R   + G       L+          +  DI  +       +   +E    V 
Sbjct: 211 VQAVISGRVPMFFGP---YEGLRYQATHVKPLALAGDINIEGTTVAIALPKGSELVKPVQ 267

Query: 243 WTHYAMVT 250
               +++ 
Sbjct: 268 AALNSLIA 275


>gi|302334975|ref|YP_003800182.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
 gi|301318815|gb|ADK67302.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Olsenella uli DSM 7084]
          Length = 316

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 39/271 (14%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDI------KKRGFL------KCGINTGLVGFAEVKA 52
                +    L              +         G L      + G+      +    A
Sbjct: 34  LTTLAVGGTALLSACGPAAQGTTDGMDGTSSGSDTGTLGDGKTMRVGMEAAYAPYNWQTA 93

Query: 53  ------------NGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
                       +G +  G+DV   + ++ A+  +P  ++   ++      AL + QIDI
Sbjct: 94  ESTDYTIPIENVDGAYADGYDVQLAKTVADALGMEPVAVK---MSFTGLIDALNNGQIDI 150

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTT 156
           +      T  R+    + F    +  G G ++         +S+S  SGA++  Q  T  
Sbjct: 151 IMAGMSATDERK--QAVDFSEPYFVGGFGLLVKSDSPYASATSLSDFSGAAVLGQKDTLL 208

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +  + D    +    H    + V    +      CDA T +          N       +
Sbjct: 209 DTVIDDIPGVN----HLTPVDSVPSQLSQLNQGTCDAITFNTENTKGFLRANPGLVAVQL 264

Query: 217 LPDIISKS--PLAPAIIQGDTEWYNIVSWTH 245
                 +   P    I +G       ++   
Sbjct: 265 ADGRGFQETVPCNAGIKKGQESVLAKINDAI 295


>gi|55821008|ref|YP_139450.1| amino acid ABC uptake transporter substrate binding protein,
           truncated [Streptococcus thermophilus LMG 18311]
 gi|55822927|ref|YP_141368.1| ABC transporter substrate binding protein, truncated [Streptococcus
           thermophilus CNRZ1066]
 gi|55736993|gb|AAV60635.1| amino acid ABC uptake transporter substrate binding protein,
           truncated [Streptococcus thermophilus LMG 18311]
 gi|55738912|gb|AAV62553.1| ABC transporter substrate binding protein, truncated [Streptococcus
           thermophilus CNRZ1066]
          Length = 144

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 7/146 (4%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            + ++  +S S+       I+KRG +K      L        + +  G+DV+  + +   
Sbjct: 3   AVFLVACSSQSSADKNWEKIEKRGSIKVATAGTLYPQTYHDDDNNLTGYDVEILKEVGKR 62

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     KI +  +       ++ S Q+D    N                    +      
Sbjct: 63  L---KLKIDFTEMGVDGMLTSVNSGQVD--IANYSLEDENNNVKKFLRSEPYKYSFTSMA 117

Query: 131 MHKKKG--ISSVSQLSGASICVQAGT 154
           + +     ISS   L G        T
Sbjct: 118 VRESDNPGISSWEDLKGKKAAGATST 143


>gi|328544884|ref|YP_004304993.1| ABC transporter, periplasmic amino acid-binding protein
           [Polymorphum gilvum SL003B-26A1]
 gi|326414626|gb|ADZ71689.1| ABC transporter, periplasmic amino acid-binding protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 250

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 17/212 (8%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 F+   A+    GF+VD  RAL   +    S              AL+ K+ D +
Sbjct: 27  TDDFPPFSFRDADERLTGFNVDLARALCEELG---SSCSLRIKAFDALIPALEEKEGDAV 83

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELT 159
                 T   ++    AF          F + K +  +  +   S  ++ V  G+     
Sbjct: 84  IAGLAKTA--DLVGKFAFSDAYLRLPARFAVRKGREAAFETDSFSTMTVSVVEGSRHAAF 141

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           LAD+      +     +  + E   A      DA+ GD  +L                  
Sbjct: 142 LADFLP----QLRLRAYASLVEARKALADGTVDAHFGDALSLSFWISGEASDDCCTFAGG 197

Query: 220 IISKSP------LAPAIIQGDTEWYNIVSWTH 245
                P      L  A+ + D    + +++  
Sbjct: 198 P-WLEPGYFDQGLMIAVRKQDAALLDALNYAL 228


>gi|291525138|emb|CBK90725.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Eubacterium rectale DSM
           17629]
          Length = 268

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           + + S +  IK +G +  GI T          +  W GFD D  R +   +  D   +++
Sbjct: 161 ADSDSDVDYIKSQGKMIVGI-TEFEPMDYKDKDDKWIGFDADMARLVGKKLGVD---VEF 216

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           + ++   + + L SK+ID++      T   E++  +        + Q  +  
Sbjct: 217 VVIDWDNKVMELDSKKIDVVWNGMTLTD--EVTKSMECTNAYCNNAQVVVER 266


>gi|148358705|ref|YP_001249912.1| cystine/glutamine-binding periplasmic protein [Legionella
           pneumophila str. Corby]
 gi|148280478|gb|ABQ54566.1| cystine/glutamine-binding periplasmic protein [Legionella
           pneumophila str. Corby]
          Length = 231

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 74/224 (33%), Gaps = 12/224 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I K G L          F     +    GFD D  + +   +     +I+Y   N  + F
Sbjct: 2   ILKPGKLLVATAYPDPPFDIEPGD----GFDGDLIKEICRILNLQLVQIKYEGENFNDIF 57

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGAS 147
           L L +K+ D++   T  T  R  S  + F        QG  ++ +    +SS   L G  
Sbjct: 58  LGLANKEYDVVISGTTITPNR--SKQVLFSNPYLEFNQGIAVNTELKPNVSSFEDLKGLV 115

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
             +Q G T++    D  + +   +     +  +E       A +          +  L  
Sbjct: 116 AGIQKGNTSDEVAQDLLRKNILSEIKYYAYNEIELAIQDLSAGKIGLVIKLYPVISCLIR 175

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    +     +   L  A+ + + +  + V+     +V 
Sbjct: 176 NYTN---LAVPLQAETHEKLGIAVAKDNFKLRDKVNLILADLVQ 216


>gi|320324766|gb|EFW80840.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 290

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVISFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +     ++      V+  +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG---NVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--------PLAPAIIQGDTEW 237
            +A R D      + + +L    + P     LP                A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDASGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
             + +     +  + EL
Sbjct: 247 EQVFNEQLAKLRASGEL 263


>gi|146281563|ref|YP_001171716.1| hypothetical protein PST_1179 [Pseudomonas stutzeri A1501]
 gi|145569768|gb|ABP78874.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 197

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 15/199 (7%)

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D CRA+++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+ ++GL F  
Sbjct: 1   MDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTG 60

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV- 179
           +TY+DGQGF+++K+ G+SS      A+      +  +       +A  MK   ++F+   
Sbjct: 61  VTYYDGQGFLVNKELGVSSARIPEQANKYPGQLSGGQQQRVAIARALCMKPKIMLFDEPT 120

Query: 180 ------------EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                       + + +   +                +   DR         +    P  
Sbjct: 121 SALDPEMVKEVLDTMVSLAESGMTMLCVTHEMGFA--RTVADRVIFMDKGEIVEQAEPEV 178

Query: 228 PAIIQGDTEWYNIVSWTHY 246
                 +      +S   +
Sbjct: 179 FFTSPVNDRTKLFLSQILH 197


>gi|323494782|ref|ZP_08099881.1| hypothetical protein VIBR0546_06587 [Vibrio brasiliensis LMG 20546]
 gi|323310975|gb|EGA64140.1| hypothetical protein VIBR0546_06587 [Vibrio brasiliensis LMG 20546]
          Length = 289

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 88/281 (31%), Gaps = 34/281 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F  I     +   + +  A    DI    ++   I      F+ +  +   KG D
Sbjct: 1   MK--IFKLICLAACVAINTAACYARSYDDIIDSQYISIAIYRDYPPFSYLVDD-VAKGID 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTD-----------WT 107
           V+  R ++  +  +           +     L++   +   L R              ++
Sbjct: 58  VEIARQIAKEMGVELKLK--WMTADENVEDDLRNNLWKGHYLERTVADVMLRVPYDKEYS 115

Query: 108 LLRE-----ISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTL 160
           L R+     +   +      + +    +    K   +S+++     ++ V+  +  +  L
Sbjct: 116 LSRDDIGELVHEQVHMFAPYHTESWQIVYDSKKIDSVSTMAVFQYHTVGVEVDSIPQFYL 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS------EH 214
           +       M+     +    +   A ++ + DA  G  S +  L+   D P         
Sbjct: 176 SSALGGR-MRDSAQHYPSTIDAVGAMQSGQVDAAMGLRSQISYLQGQLDNPQYQLATNAF 234

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +L     +  +  A+     +    V    ++M+   ++ 
Sbjct: 235 PMLGQQQWE--IGMAVKSNYRQLGYAVGDIVHSMIEKGQME 273


>gi|242237843|ref|YP_002986024.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242129900|gb|ACS84202.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 296

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 66/226 (29%), Gaps = 23/226 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-----------SIL-GDIKKRGFLKCGINTGLVGFA 48
           M K  +   L L ++    ++  +             L  DIK+ G +    N     + 
Sbjct: 2   MKKSAYALALALGMVTGVGYAAESIPVQKVDQALHDRLPDDIKQAGKIVAVNNGSFPPYE 61

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            VK+  +  G   D   A+   +           L+       ++S +  +         
Sbjct: 62  IVKSPTEMDGASADLAEAVGQLLGVKIEHATVSGLSG--VLAGIKSGRYQMAIGPVG--D 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFK- 165
             +      F      +   F + K   + I+ +    G SI V AG + E  +    K 
Sbjct: 118 YPDRQKENDFID-YVQEFVVFAVQKGNPQKINGLDDTCGKSIAVMAGGSAEQVIRQQSKV 176

Query: 166 ---AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
              A         F        A R+ R DA+    + L       
Sbjct: 177 CTDAGKPAVTVQSFTDQPSSILAVRSKRSDAFFSSQAPLVYFVDQA 222


>gi|153010124|ref|YP_001371338.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562012|gb|ABS15509.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 286

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 72/244 (29%), Gaps = 14/244 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
             +     +   +    A+    +K+   L  G +     F  +  +G   GFDV+    
Sbjct: 16  ALLAATFAVVALAPHEAAAAPQTVKEN-TLSVGSDLTYPPFVYM-KDGKPAGFDVELMEG 73

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +       ++            ++   D+++     T  R+    L F P      
Sbjct: 74  VAKQLG---LAAEFKDTRFTSLITGARANHFDVIASALYVTPERQKI--LNFIPYIKAGS 128

Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERVE 180
              ++   K   ++  +L G  I    G +    L         K +        F+   
Sbjct: 129 SLLVLKDAKFRPANEKELCGKIIGSMQGASWLPKLKALSEDYCAKNNLGAIETREFDTDA 188

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A R+   D    D      L          V    +I    +  A    + E +N 
Sbjct: 189 QVTQALRSGSVDVEFMDNVVAAELLKKFPDDYA-VTSSALIYPIMVGVATTPQNKELFNA 247

Query: 241 VSWT 244
           ++  
Sbjct: 248 MNDA 251


>gi|153802488|ref|ZP_01957074.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|124121958|gb|EAY40701.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
          Length = 167

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 7/145 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            ++    +K G++     F  VK + + +GF+VD    +      +  K++++  N    
Sbjct: 18  TVQAATEVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKR---NDYKVEFVTANFSGL 73

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147
           F  L++ +ID +S     T  R+      F      DG    + K    I  +  L+G +
Sbjct: 74  FGLLETGRIDTISNQITITDARKA--KYLFSDPYVIDGAQITVRKGNDAIKGIDDLAGKT 131

Query: 148 ICVQAGTTTELTLADYFKAHNMKYH 172
           + V  G+  E  L ++ K   +   
Sbjct: 132 VAVNLGSNFEQLLRNHDKDGKINIK 156


>gi|239834532|ref|ZP_04682860.1| extracellular solute-binding protein, family 3 [Ochrobactrum
           intermedium LMG 3301]
 gi|239822595|gb|EEQ94164.1| extracellular solute-binding protein, family 3 [Ochrobactrum
           intermedium LMG 3301]
          Length = 230

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 62/207 (29%), Gaps = 14/207 (6%)

Query: 44  LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
              F  +  NG ++G   D    ++  +  +P    Y  +        L+ K+ DI+   
Sbjct: 3   YAPFDML-TNGTYEGMTKDLFDGVAKELGAEP---VYQDIPWTAELPGLEVKKFDIVIAP 58

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLAD 162
              T  R      AF           +       +     + G ++ VQ GT     L  
Sbjct: 59  VTITPER--LERYAFSLPIADATVALVHAASNTELKKPEDIKGKTVGVQQGTAQFKQLQA 116

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
           + ++     +   +   +E  A   A R DA  G  S      L   RP    +      
Sbjct: 117 FGESLG-GVNVKEYGTTDEAYADLAAGRLDAVAG--SLPNLTYLVKTRPETFAMFDKPTF 173

Query: 223 KSP--LAPAIIQGDT--EWYNIVSWTH 245
            +P   A    +      +   V+   
Sbjct: 174 GNPTYFAWVARKDADSASFIKAVNDAI 200


>gi|254707032|ref|ZP_05168860.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
          pinnipedialis M163/99/10]
          Length = 62

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/62 (46%), Positives = 40/62 (64%)

Query: 6  FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFDVD+CR
Sbjct: 1  MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60

Query: 66 AL 67
          A+
Sbjct: 61 AV 62


>gi|89095411|ref|ZP_01168324.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Oceanospirillum sp. MED92]
 gi|89080318|gb|EAR59577.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Oceanospirillum sp. MED92]
          Length = 555

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 14/209 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G ++ G +     +  +   G   G++ +  +A++  +     +++       +    
Sbjct: 21  AEGVIRVGGDHNYPPYEFLNDEGLPDGYNTELTKAIAEVMG---MEVEIELGRWDDMRKR 77

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150
           L   ++D L          E S   AF P      Q     K     SS+ +L G  + V
Sbjct: 78  LSEGEVDTLQGMV---FSEERSKSFAFSPAHALIHQSIFARKGSPKASSLVELDGYEVIV 134

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTND 209
           Q G      + DY   + +    ++ +          + + D A   ++  LY  +    
Sbjct: 135 QRG----GIMHDYLLKNRVGATLVLVDTHASALRLLASGQHDFALVANLPGLYLGREL-- 188

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             S  V +           ++++ +TE  
Sbjct: 189 ELSNIVPVGKPFGAQSYGYSVVKDNTELL 217


>gi|210631312|ref|ZP_03296855.1| hypothetical protein COLSTE_00740 [Collinsella stercoris DSM 13279]
 gi|210160079|gb|EEA91050.1| hypothetical protein COLSTE_00740 [Collinsella stercoris DSM 13279]
          Length = 293

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 81/266 (30%), Gaps = 26/266 (9%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV------------KANGDWK-GFDVDFC 64
           +  + +A+    +     L+ G+      +                 +G +  G+DV   
Sbjct: 37  SGSAADAATTAQLGDGKTLRVGMEAAYAPYNWQVSEESEYTIPIENVSGAFADGYDVQVA 96

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +  +P  ++   L       AL S QIDI+      T  R  +   AF      
Sbjct: 97  KIIAEGLGMEPVAVK---LEFGSLIDALNSGQIDIVCAGMSITPER--ADAAAFSDSYVD 151

Query: 125 DGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           D    I          ++  +L+GASI  QA T  +  +      ++M       E    
Sbjct: 152 DDIVMICKNDSAYAGATTFDELAGASILGQAATMYDDVIEQIPDVNHMT----PAETQPM 207

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNI 240
           +        CD  T  + +   L           +         P   A+   +    + 
Sbjct: 208 VVENLMNGTCDIITYSMLSAPKLLEVYHDLVVLDMEDSFEDSLMPDNAAVANENKAILDQ 267

Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266
           V+     +   +   +    +++   
Sbjct: 268 VNEIIDGIDDEQRQDMWSACMDRQPA 293


>gi|330890406|gb|EGH23067.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 290

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVISFPALAGLLEKGRSDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +     ++      V+  +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG---NVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--------PLAPAIIQGDTEW 237
            +A R D      + + +L    + P     LP                A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDASGNPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EQAFNEQLAKLRASGEL 263


>gi|54294066|ref|YP_126481.1| hypothetical protein lpl1130 [Legionella pneumophila str. Lens]
 gi|53753898|emb|CAH15369.1| hypothetical protein lpl1130 [Legionella pneumophila str. Lens]
          Length = 231

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 12/224 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I K G L          F     +    GFD D  + +   +     +I+Y   N  + F
Sbjct: 2   ILKPGKLLVATAYPDPPFDIEPGD----GFDGDLIKEICRILNLQLVQIKYEGENFNDIF 57

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGAS 147
           L L +K+ D++   T  T  R  S  + F        QG  ++ +    +SS   L G  
Sbjct: 58  LGLANKEYDVVISGTTITPNR--SKQVLFSNPYLEFNQGIAVNTELKPNVSSFEDLKGLV 115

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
             +Q G T++    D  +           +  +E       A +          +  L  
Sbjct: 116 AGIQKGNTSDEVAQDLLRKKILSGIKYYAYNEIELAIHDLSAGKIGLVIKLYPVISCLIR 175

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    +     +   L  A+ + + +  + V+     ++ 
Sbjct: 176 NYTN---LAVPLQAETHEKLGIAVAKDNFKLRDNVNLILADLIQ 216


>gi|187927949|ref|YP_001898436.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12J]
 gi|187724839|gb|ACD26004.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12J]
          Length = 251

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 74/214 (34%), Gaps = 11/214 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            LK G  T     + +       +G  V+  +A++        +I++ P+   E   AL 
Sbjct: 28  VLKAGSTTAGQPTSGLNPQTKQLEGISVEVLQAIAKDTG---LQIEFKPMTFAELQPALL 84

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
             +IDI++ +   T  R+  +       +Y D     ++  K   S +   G +I +  G
Sbjct: 85  EGKIDIIAASFGITPTRQKIVEFTDVYGSYRDKLLVSINDTKTYRSAADFKGMAIAIPKG 144

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T    L D                  E      A R      +   +      N  P+ 
Sbjct: 145 STYIDGLKD------AGAILTFVSTPPEAIGELEAGRVAGVVDNGLQIAYRMQNNAHPAL 198

Query: 214 HVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            ++     I +  LA A+ +GD +    ++ +  
Sbjct: 199 KIVDSYQPIQEGKLAFAVRKGDADLLAKLNTSLK 232


>gi|300716670|ref|YP_003741473.1| ABC transporter, substrate binding protein [Erwinia billingiae
           Eb661]
 gi|299062506|emb|CAX59623.1| ABC transporter, substrate binding protein [Erwinia billingiae
           Eb661]
          Length = 311

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 79/242 (32%), Gaps = 46/242 (19%)

Query: 1   MYK-------DFFVSILCLIILFFTSFSTNASILGDIK---------------------- 31
           M K           + L  +I   +  +T A  L  +K                      
Sbjct: 2   MIKANPLWQCSLLAASLTSVIWLSSVTATAAEKLDVLKNETPINAPANPDAIGKIPAGFH 61

Query: 32  --KRGFLKCGIN-TGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             + G+L    + T     A + ++     G D D  R L+ ++     K++ +P + ++
Sbjct: 62  FIEPGYLTVATSATNSPPLALLASDNKTRIGSDPDIARLLADSLG---LKLRLVPASWED 118

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLS 144
             L + + + D+   N   T  R+      F      D   F +     I   +S   ++
Sbjct: 119 WPLGIAAGRYDVAMFNIAVTEERKK--KFDFA-TYRSDNHAFSVKANSPIAAINSPKDVA 175

Query: 145 GASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           G  I V +GT  E  L  + + +  K      PI          +  + R DA  G  S 
Sbjct: 176 GKRIIVASGTNQERILLSWDQQNREKGLAPVEPIYLTDDASATLSLLSGRADAMFGPHSI 235

Query: 201 LY 202
             
Sbjct: 236 AA 237


>gi|294851683|ref|ZP_06792356.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|294820272|gb|EFG37271.1| polar amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
          Length = 290

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 77/271 (28%), Gaps = 28/271 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKR---------GFLKCGINTGLVGF 47
           M        + + +    + +      A    + K+R           L+         F
Sbjct: 10  MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF 69

Query: 48  AEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
             +   G    G+++D  +AL   +       Q   +   E    +   Q D +     W
Sbjct: 70  NRLNERGQLLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDGQADAIIAG--W 126

Query: 107 TLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
                      F          F     K     +        + V AGT  E  L +YF
Sbjct: 127 EPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYF 186

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-----SEHVILPD 219
                   P+ +   + +  A +  + D    D  +L A   + +       ++   L  
Sbjct: 187 PQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAP 242

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               S L+ A+ + ++   +  +    A+  
Sbjct: 243 QYLGSGLSIAVTRQNSALASAFNNALQALQQ 273


>gi|172064907|ref|YP_001815619.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171997149|gb|ACB68066.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 286

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 69/249 (27%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 28  QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 84

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-------- 140
              LQ+ + D+L      T  RE    L F          F +   K +           
Sbjct: 85  IPGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPMVK 142

Query: 141 ----------------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                            QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 143 LTGDANADRPTVDTLRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 200 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 259

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 260 DTAIGAALA 268


>gi|91781169|ref|YP_556376.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693829|gb|ABE37026.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 304

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 82/270 (30%), Gaps = 27/270 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-------------LGDIKKRGFLKCGINTGLVGF 47
           M     V    L+     +F+ +A                 +I+  G +    +      
Sbjct: 9   MSAACLVGGALLLTTTGFAFADDAITKSVTTDPALHAMLPKEIRDAGVITLATDAHYPPC 68

Query: 48  -AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
            +    N    G++ DF  AL   +     +++   L+      ++QS + DI       
Sbjct: 69  ESFADDNVTMIGWEPDFWDALGKKLG---VRVKPGSLDFDNLIPSIQSGRSDIAMECISD 125

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD---- 162
           +L RE    + F  ++      + +      S    L G     Q GTT   ++      
Sbjct: 126 SLEREK--QVLFVDVSISTNGVYALGNSPITSDPLSLCGLKSGSQTGTTFGASVDTVLSP 183

Query: 163 -YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-I 220
              K        + F   +    A  + R D    D S+   LK  + +P + V L    
Sbjct: 184 LCVKNGKPAITKVEFPSEDATLLALLSGRVDFLVNDASSAAELKKKSQKPIKLVTLSVLP 243

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    +    T+    +     A++ 
Sbjct: 244 KWFD--GIIMKPQRTDLAKALLAGTQAIIA 271


>gi|309790935|ref|ZP_07685477.1| extracellular solute-binding protein [Oscillochloris trichoides
           DG6]
 gi|308227049|gb|EFO80735.1| extracellular solute-binding protein [Oscillochloris trichoides
           DG6]
          Length = 314

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 67/225 (29%), Gaps = 17/225 (7%)

Query: 36  LKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +   +      F  V  N G  +G+D D    +   +   P    Y   + +    A+ +
Sbjct: 85  VTVAVENAYPPFNYVNPNTGQGEGWDYDAWNEICRLLNCVP---VYQEASWEGIIQAVAN 141

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ----LSGASICV 150
           KQ D  +     T  R   +   F        Q  +    +   +        +   +  
Sbjct: 142 KQYDAAADGITITPERAEQVA--FSDGYIQVTQRLMARVGETRFTNMDEFIANAELRLGT 199

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GTT   T                FE+     AA      D    D +A      T   
Sbjct: 200 QTGTTNYETAVKLLPEA----RIQAFEQFPFAVAALINGDVDGVLMDETAGQGYIGT--N 253

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + V++ D IS   L     + D++    V+     M  + +L 
Sbjct: 254 AEQIVLIGDPISSDALGFIFPK-DSDLVAPVNQALAEMRASGKLD 297


>gi|298246440|ref|ZP_06970246.1| extracellular solute-binding protein family 3 [Ktedonobacter
           racemifer DSM 44963]
 gi|297553921|gb|EFH87786.1| extracellular solute-binding protein family 3 [Ktedonobacter
           racemifer DSM 44963]
          Length = 297

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 64/220 (29%), Gaps = 13/220 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L  G        A +   +    GFD+D    ++  +      +    +  K    
Sbjct: 60  QTGVLTVGSYLQYPPQAFLDPASQRPMGFDIDLITEIAHRLGVK---VSITNMGYKTLPD 116

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASIC 149
           A+   ++D+       +    +   + F P         +       I++++ L G S+ 
Sbjct: 117 AVTQGEVDVAIAAIPLSDT--LQARVNFVPYFKGGEALLVPRGNPLQIATLNDLCGRSVG 174

Query: 150 VQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           V   +  +  L    A   +A             +    A    R +A   D+  +    
Sbjct: 175 VVQNSLEQSDLELTSASCVEAGQASIRLTYISPPDTFIDALTQKRVEATFQDLPQVDFYA 234

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           +      +       ++      A+ +      +++    
Sbjct: 235 MKYANLVQQAGPILNVTME--GIAVRKESVNLGHLIQVVL 272


>gi|229826277|ref|ZP_04452346.1| hypothetical protein GCWU000182_01649 [Abiotrophia defectiva ATCC
           49176]
 gi|229789147|gb|EEP25261.1| hypothetical protein GCWU000182_01649 [Abiotrophia defectiva ATCC
           49176]
          Length = 374

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 66/186 (35%), Gaps = 14/186 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG--DWKGFDVDFCRALSSAIFD 73
            +S + +   L  I   G + C  +        V  ++G   + G D+D  + ++ ++  
Sbjct: 118 LSSITGDGDRLDKILAAGVITCATSPDFAPNEFVDLSSGETKYVGCDMDLAQYIADSLGV 177

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA--FRPITYFDGQGFIM 131
               ++   +       A+ + Q+D+      +T  R  ++ L+  F      +GQG ++
Sbjct: 178 K---LEIKAMKFDAIKAAVTTGQVDMAIAGFAYTEERAKNMQLSDLFGNTDADEGQGIVI 234

Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            K+    + +    +G ++  Q G+       D       +        V        A 
Sbjct: 235 LKENEANLKTADDFTGKTVLAQNGSIQI----DLTTNQLSQATCKPITDVNNGIMEVLAG 290

Query: 190 RCDAYT 195
           + D  T
Sbjct: 291 KADGLT 296


>gi|240145928|ref|ZP_04744529.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Roseburia intestinalis L1-82]
 gi|257201957|gb|EEV00242.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Roseburia intestinalis L1-82]
          Length = 513

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 6/101 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L  G N     +     +G   G D+D  RA+S  +     +++   +       A
Sbjct: 183 ENGTLTVGTNAEFPPYESY-EDGQIVGIDMDIMRAVSDELG---MELKIEDMAFDSIIPA 238

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           + + ++DI +     T  R+    + F        Q  I+ 
Sbjct: 239 ISTGKVDIGAAGFTVTEERKK--NVNFTDTYTTSKQVIIVK 277


>gi|269215687|ref|ZP_06159541.1| putative ABC amino acid transporter, periplasmic ligand binding
           protein [Slackia exigua ATCC 700122]
 gi|269131174|gb|EEZ62249.1| putative ABC amino acid transporter, periplasmic ligand binding
           protein [Slackia exigua ATCC 700122]
          Length = 315

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 83/281 (29%), Gaps = 39/281 (13%)

Query: 1   MYKDFFVSILCL----IILFFTSFSTNASILG----------------DIKKRGFLKCGI 40
           M + F  + +        +  +  +   SIL                  I + G L+  I
Sbjct: 2   MKRRFVGAFVLALTLCAAMALSGCAQVQSILQPEAYEPEAPTPTVDTPTIGQSGTLRVAI 61

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +   V FA   ++G   G++VD   AL+S +     K++ + +       AL S + DI 
Sbjct: 62  DADDVPFAGA-SDGKPVGYNVDVAAALASKLG---LKLELVDVGDSGAAEALSSGKADIA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                         G+         G              +  S  SI  Q  + +   +
Sbjct: 118 MGMATSNPA----DGVWLSAPYAKSGVTLFAKPGSTTVPTAD-SSPSIAAQVSSRSAWAV 172

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            + F         +    ++   ++      D    D         T+       + P  
Sbjct: 173 ENLFGEA----SVVAATNLQSAFSSLSNGDADYVAADAVIGTYAAHTSK----VDVAPIA 224

Query: 221 ISKSPLAPAI--IQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           + + P    I     +    + V+    ++ +   LG+   
Sbjct: 225 MLEEPSGYCIGVPSSNANLQSAVTDALSSLDSGGVLGLISN 265


>gi|254381564|ref|ZP_04996928.1| extracellular solute-binding protein [Streptomyces sp. Mg1]
 gi|194340473|gb|EDX21439.1| extracellular solute-binding protein [Streptomyces sp. Mg1]
          Length = 291

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 81/247 (32%), Gaps = 16/247 (6%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRA 66
           +            + N+  L    +RG L    +      + E     + KGF+     A
Sbjct: 30  TAGSAAASGSPDCAANSPAL---HRRGELTVATDSPAYAPWFEDNNPSNGKGFESAVAYA 86

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +     +++++       + A  +K  D        T  R  +  + F    Y   
Sbjct: 87  VAGKLGFGRDQVKWVVEPFAHSY-APGAKNFDFDVNQISITPQR--AQAVDFSTSYYKAN 143

Query: 127 QGFI---MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           Q  +     K    +S+    GA I VQ  TT+   + D  K       P VF    +  
Sbjct: 144 QAILTLDNSKFANAASLEAFKGARIGVQVATTSYQAVLDQLKPAQ---RPSVFNTTNDEV 200

Query: 184 AAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
            A +  + DA   D+  ++ L     N+            +       + +G + + + V
Sbjct: 201 NALKNGQIDAIVTDLPTVFYLAGSEINEAKIVGQFGYAGGTPEEFGLLLPKG-SGYTSCV 259

Query: 242 SWTHYAM 248
           +    A+
Sbjct: 260 NKALDAL 266


>gi|291539690|emb|CBL12801.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Roseburia intestinalis
           XB6B4]
          Length = 513

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 6/101 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L  G N     +     +G   G D+D  RA+S  +     +++   +       A
Sbjct: 183 ENGTLTVGTNAEFPPYESY-EDGQIVGIDMDIMRAVSDELG---MELKIEDMAFDSIIPA 238

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           + + ++DI +     T  R+    + F        Q  I+ 
Sbjct: 239 ISTGKVDIGAAGFTVTEERKK--NVNFTDTYTTSKQVIIVK 277


>gi|152970011|ref|YP_001335120.1| extracellular solute-binding family protein 3 [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150954860|gb|ABR76890.1| putative bacterial extracellular solute-binding protein, family 3
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 276

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 66/232 (28%), Gaps = 15/232 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           ++ G +  G +     +  +  N    GFD++    L+ ++  +   I            
Sbjct: 29  QQSGKITAGSDMTFFPYEYM-ENNKPAGFDIELLNGLAKSMGREAVNID---TRFPNLIP 84

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASI 148
            LQ  + DI + +   T  R   + +         G+  +  K       +     G  I
Sbjct: 85  GLQGGRFDITNSSMYITAERLKVIDM---VPYLKSGEAILARKGSDYQPKTPEDFCGHKI 141

Query: 149 CVQAGTTTELTL----ADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALYA 203
                T+    L    ADY     +K   +  +    +   A  +   DA   D +    
Sbjct: 142 GSMGATSWLAQLQKLSADYCVKKGLKPIALSVYTTDPQTTQALLSRAVDAQITDAAVARG 201

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                      +    +I        + +G+T+    +           E  
Sbjct: 202 GVEKLGD-RVVISSDTLIYPVLNGFGVKKGNTKVKTALEEALKKYSATPEYA 252


>gi|330950461|gb|EGH50721.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae Cit 7]
          Length = 290

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVVSFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +     ++      V+  +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG---NVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--------PLAPAIIQGDTEW 237
            +A R D      + + +L    + P     LP                A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDASGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EQAFNEQLAKLRASGEL 263


>gi|237801380|ref|ZP_04589841.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806663|ref|ZP_04593367.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024239|gb|EGI04296.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027777|gb|EGI07832.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 290

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 83/257 (32%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    +F   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALVLNAALAFPALAGLLEKGRSDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MH-----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +      K   +  V+    A +  Q G+       D   A     + ++F++  E  AA
Sbjct: 130 VKTGNPLKLHSLKDVASNGKARLATQPGSNQVQEARDSGIA---TTNVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--------PLAPAIIQGDTEW 237
            +A R D      + + +L    + P     LP                A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKTNSPDIERALPFEQIPDASGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EQAFNEQLAKLRASGEL 263


>gi|329296083|ref|ZP_08253419.1| glutamate and aspartate transporter subunit [Plautia stali
           symbiont]
          Length = 130

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 1/123 (0%)

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           M K   I  ++ + G ++ V +GTT+E+ L        M    I  +   +        R
Sbjct: 1   MKKGVDIKDLADVKGKTVVVTSGTTSEILLRKLNDEKKMDMRIISAKDHGDSFRTLETGR 60

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH-YAMV 249
             A+  D + L   +    +P    I+    SK      + + D  +  ++  T   A +
Sbjct: 61  AVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKETYGCMLRKDDAPFKQLMDDTIAKAQM 120

Query: 250 TAE 252
           + E
Sbjct: 121 SGE 123


>gi|225375503|ref|ZP_03752724.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM
           16841]
 gi|225212638|gb|EEG94992.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM
           16841]
          Length = 414

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              +  G L  G N     +     N +  G DVD  +A++  +     +++   +    
Sbjct: 80  DASRGNGTLTMGTNAEFPPYEYY-ENNEIVGIDVDIMQAIADKLG---MELKIEDMAFDS 135

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
              A+ + +ID+ +     T  R+    + F        Q  I+     +
Sbjct: 136 IIPAVSTGKIDVGAAGFTVTEERKK--NVNFTDTYATSKQVIIVRDGNAV 183


>gi|152994476|ref|YP_001339311.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150835400|gb|ABR69376.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 280

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 17/215 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L  +    T  S NA      K+ G +  G +     +  +  +    GFD++
Sbjct: 10  KTLRSFALGAVGALLTVSSMNAMAF---KESGKIIAGSDVTFYPYEYM-KDNKPAGFDIE 65

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F   L+  +  +   +             L+  + DI +     T  R   + +      
Sbjct: 66  FLDGLAKVMGRESVTLD---TRWANLIPGLRGGRFDITNSAMYITEERLKVIDMI---PY 119

Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTL----ADYFKAHN-MKYHPIV 175
              G   +  K       +     G +I   AGT     +    A+Y +A+         
Sbjct: 120 LKSGVSILSVKGSDYQPKTPEDFCGHTIGSMAGTAWLKPVRKVSAEYCEANGLEPIKINE 179

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +    +   A  +   DA   D +    +      
Sbjct: 180 YPTDPQTTQAMLSRAIDAQITDAAVASGIVERLGN 214


>gi|94263816|ref|ZP_01287622.1| PAS [delta proteobacterium MLMS-1]
 gi|93455827|gb|EAT05994.1| PAS [delta proteobacterium MLMS-1]
          Length = 1047

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 70/226 (30%), Gaps = 9/226 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G +     +  +   G+  G++V+  RA++  +      ++       E   AL +
Sbjct: 266 TLIIGGDHNYPPYEYLNEKGEPAGYNVELTRAIAHQMG---LNVEIRLGPWPEMRQALVA 322

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID L +   ++  R++        +           + +  SS++QL G  I VQ G 
Sbjct: 323 GEIDAL-QGMFYSPRRDLIYDFTPPHLVNEGLAVVRRGEGEPPSSLAQLVGKRIVVQDG- 380

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + D+   + +     V +   +          D         +            
Sbjct: 381 ---DIMHDFALENGLGSQLTVVDGPGDALRELARGEHDCALVSRLTAHYWI-KKQGWDSL 436

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            +  + +  S    A+  G+     ++      +  + E       
Sbjct: 437 TVGREPLLSSGYGYAVQAGNKALLALLGEGLKVLGESGEYRRIHDQ 482



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 75/226 (33%), Gaps = 16/226 (7%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +  R  +K         F  V ANG   GF V+  RA  +A+  +   + +      E 
Sbjct: 31  AVLAREPIKSASEYDFPPFCVVDANGLADGFSVELLRAALAAMGRE---VTFKVGPWSEV 87

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147
              L   ++  L      T  RE      F           ++ ++   I+++  L G  
Sbjct: 88  RGWLARGEVQAL-PLVGRTPEREAI--FDFTFPYMSPHGAIVVREQSRGIATMEDLKGKE 144

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V  G   E  L    +              E         + DA       L AL+L 
Sbjct: 145 VAVMLGDNAEEFLRRQER----GIKITTTPSFEVALRELAEGQYDAVVVQR--LVALRLI 198

Query: 208 NDRPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +   +++ +   P    +   + A+ +GD+E   +++     ++ 
Sbjct: 199 QEGGYDNLRVINRPIGEFRQDFSFAVTKGDSETLALLNEGLAVVMA 244


>gi|295092595|emb|CBK78702.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
          Length = 273

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 10/204 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   ++ G      G+ +   NG+  G+D D    +          I+Y  +     +  
Sbjct: 35  EEKVIRIGCEATTPGWIQTDENGNLTGYDYDVWMEIGKRTGYK---IEYQIMEWDGMWAM 91

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICV 150
           L  +++D +      T  R  +  L+                 + + S+  L  G +I  
Sbjct: 92  LNDQRLDTVGEQISATDERREAYCLSEPYAYNIYSL-LSRADNEELQSMDDLKDGMTISC 150

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +  T+ EL +    K + +K  P+ ++ +          RCD +    ++      T + 
Sbjct: 151 ETNTSDELIVEAIEKEYGVKLEPVYYDGMS--VQEVALGRCDLWPRAKTSC---ITTLEE 205

Query: 211 PSEHVILPDIISKSPLAPAIIQGD 234
                IL D            + +
Sbjct: 206 VDNLKILGDTNVLETNVYPFPKTE 229


>gi|145299524|ref|YP_001142365.1| transglycosylase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|215275589|sp|A4SNZ5|MLTF_AERS4 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|142852296|gb|ABO90617.1| predicted soluble lytic transglycosylase fused to an ABC-type amino
           acid-binding protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 496

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 7/200 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F+ ++ L+ L    F T +S L  I++RG ++ G   G    +  + +   +GFD + 
Sbjct: 17  RLFIGLMLLLTLVGCDFYTPSSQLEQIRQRGEIRVGTIYGST--SYYQRDDLAQGFDYEL 74

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            ++ +  +    + +    +   E    L+  ++D+ +     T  R             
Sbjct: 75  AKSYADWLGVKLTIVPVYSIA--ELVELLEKGKLDLAAAAIVVTPERRALFRFG-PGFYQ 131

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI 182
              +    +       +  L G SI V AG+T E  L +  K +  +K+       VEE+
Sbjct: 132 VSPKLVYRYGSPKPKDIGDLKG-SIVVPAGSTGEDLLRELAKEYPGLKWSTNRDADVEEL 190

Query: 183 DAAYRAHRCDAYTGDISALY 202
                  + D      + L 
Sbjct: 191 LKQVADGKIDYTVVQDTVLA 210


>gi|238025561|ref|YP_002909793.1| family 3 extracellular solute-binding protein [Burkholderia glumae
           BGR1]
 gi|237880226|gb|ACR32558.1| Extracellular solute-binding protein, family 3 [Burkholderia glumae
           BGR1]
          Length = 293

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 69/227 (30%), Gaps = 14/227 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78
            +   S+L  +     L+  ++    G        G+ +G DVD   A ++ +  D   +
Sbjct: 49  TARAGSVLERVHATRTLRVCLSLNDGGITYRDPRTGEARGIDVDLSAAFAADL--DAQLV 106

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI- 137
                +       L + + DI       T  R     L F       G   I  +   + 
Sbjct: 107 TI-DTSIATFTADLLANRCDIAMLAVAATPARRAL--LRFSRPYLTSGVVGIASRGSEVV 163

Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              +     G  + VQ G+  E  L    K        +V +  +  +    A R D   
Sbjct: 164 SNWNDIDQPGVRVGVQRGSQIEPLLRQTLK----HASVVVLDGRQNREDELLAGRLDVLL 219

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             +       L N   +  V  P      P A A+  GD  W   V 
Sbjct: 220 AGLP-YAYRLLENADWARVVAPPKPFHPMPYAYAVRPGDDAWLATVD 265


>gi|296394029|ref|YP_003658913.1| family 3 extracellular solute-binding protein [Segniliparus
           rotundus DSM 44985]
 gi|296181176|gb|ADG98082.1| extracellular solute-binding protein family 3 [Segniliparus
           rotundus DSM 44985]
          Length = 285

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 76/244 (31%), Gaps = 23/244 (9%)

Query: 7   VSILCLIILFFTSFSTNASILGD-----------IKKRGFLKCGIN-TGLVGFAEVKANG 54
            ++L L +      +                   ++  G L    +      +       
Sbjct: 14  TAVLSLALFAAPGCAPEDDGPARPADCGNTAALPLRAPGKLTVATDEPAYAPWFHGDDPS 73

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +GF+     A++  +     ++ ++ +     + A   K  D        T  R    
Sbjct: 74  NGQGFESALTYAVAGEMGFAKEQVDWVRVPFTNAY-APGEKPFDFDVNEVSITPER--RQ 130

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F    Y   Q  +       ++++QL+  SI V  GTT+   + +            
Sbjct: 131 VVDFSTGYYQVRQVVLGPSGVEQATLAQLAQRSIGVVVGTTSSQAIDESVTPRQP---VA 187

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAII 231
            F+  +    A  A + DA   D+     L++ +  P+  + +     ++ +      + 
Sbjct: 188 YFDTNDLAAQALLAGQVDALVVDLPT--GLQIQSANPAAQLTIFGKLPVVPREEFGLVLG 245

Query: 232 QGDT 235
           +   
Sbjct: 246 KNSP 249


>gi|150018473|ref|YP_001310727.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904938|gb|ABR35771.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 280

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 81/233 (34%), Gaps = 5/233 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75
             + S     L  IK++G +     +  + F  + A      G D D    ++  +  + 
Sbjct: 29  MANSSIEKDRLEMIKEKGIITIAAPSKEIPFFWINAETNKMSGIDADVITEITRRLGINK 88

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            +I+ +   A           IDI       T   E  +   F    Y + +  I+ +  
Sbjct: 89  VEIKEV-TFADLLNKFNADDSIDIAVGGIFITPESEKLVA--FTKPLYKESETVIVPRFS 145

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I+ +S L  A I V+ GT  E  LA  +K +N+    +  +   ++  A  + + DA  
Sbjct: 146 KINFMSDLKNAVIGVEKGTIFED-LAKKWKKNNLIKDALSLDSTTDLFNAISSGKIDAGL 204

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            D   +       D     +       +  +  A+ + D    N ++     M
Sbjct: 205 ADSIIINYYIKEKDPLLRQLKGYTPELQGVMGIAVKKDDVFLLNALNKAINDM 257


>gi|291535161|emb|CBL08273.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Roseburia intestinalis
           M50/1]
          Length = 445

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 6/101 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           + G L  G N     +     +G   G D+D  RA+S  +     +++   +       A
Sbjct: 183 ENGTLTVGTNAEFPPYESY-EDGQIVGIDMDIMRAVSDELG---MELKIEDMAFDSIIPA 238

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           + + ++DI +     T  R+    + F        Q  I+ 
Sbjct: 239 ISTGKVDIGAAGFTVTEERKK--NVNFTDTYTTSKQVIIVK 277


>gi|262043888|ref|ZP_06016976.1| arogenate dehydratase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038742|gb|EEW39925.1| arogenate dehydratase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 220

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 63/216 (29%), Gaps = 14/216 (6%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G+       A   A G+ +G+DVD  R L   +     K+ ++  +       LQ+ + 
Sbjct: 1   MGVPGDYAPLAFRNAAGELQGYDVDMARDLGRTLG---LKVSFVYTSWPALAADLQADKF 57

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTT 155
           DI       T  R  +  L+   +               + S+         + V  G T
Sbjct: 58  DIAMGGVTETPARAQAFALSHPVVANGKIALANCQAAPRLGSLEKIDRPDVKVVVNPGGT 117

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH- 214
            +  + ++ K        I  +   +   A R    D    D   +      +  P    
Sbjct: 118 NQSFVDEHIKQA----QIIRVQNNVDNLQALRQKTADIMVTD--LIEGDYYQSKEPGVFC 171

Query: 215 --VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                P   + S     + + +      V+    + 
Sbjct: 172 VANETPFAGTASNKVYMMSKDNPALLKKVNQWLDSQ 207


>gi|54302121|ref|YP_132114.1| glycosylase [Photobacterium profundum SS9]
 gi|46915542|emb|CAG22314.1| hypothetical glycosylase [Photobacterium profundum SS9]
          Length = 480

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 22/262 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M K F +++LC      TSF+              L +I + G ++  ++  L GF  + 
Sbjct: 1   MRKRFVIALLCFNAFISTSFALEVFPINNTKFTGDLTEISEHGVIRILVSADL-GFYYLD 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
             G  KG   +        + ++      +Q +P+N  +   ALQ+   DI++ N   T 
Sbjct: 60  -KGHPKGITSEMLLLFEQHVLNNTKQKLHLQVIPINRDQLLPALQAGVGDIVAANLTITH 118

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-H 167
            R+ ++  +   ++  +        K  I+ +  LS  ++ ++A ++   ++    K   
Sbjct: 119 QRKKTVDFSSPILSNINEIFITHADKSPITQLKNLSKKNVWIRASSSYYRSVNRINKKLA 178

Query: 168 NMKYHPIVFERVEEIDAAY------RAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
                 +    +EE    Y      +         D        L  D    H   P I 
Sbjct: 179 KQGLETMYVHFIEETLQDYELLQMIQQKIIPMTVLDNHKAEFWDLVTDDLKMHTDFP-IR 237

Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243
               +  A  +   E   +V+ 
Sbjct: 238 KGGSIGWAFRKDSPELAELVNN 259


>gi|294628577|ref|ZP_06707137.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
 gi|292831910|gb|EFF90259.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
          Length = 319

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 78/235 (33%), Gaps = 20/235 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
              A +L     R  +   +     G + +       G DVDF  A++  +     K   
Sbjct: 64  PAAAKLLPAGVDRLTIAYSVGGTPPGTSYLGDGKTLVGQDVDFANAVAKVLGIRLDK--- 120

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGI 137
              + +    AL S + D+ + N   T  R  +  + F      DGQGF      K   I
Sbjct: 121 QEASFEAILPALGSGKYDLGAGNFGVTEERRKT--IDFV-TYINDGQGFAAREDSKLGRI 177

Query: 138 SSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           + + QL G  I   AGTT E TL         A    Y    +     + ++ +  R D 
Sbjct: 178 TELKQLCGLDIATGAGTTFEATLEQNKHVCADAGEKPYKVQTYSETGALWSSLQQGRSDV 237

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD---TEWYNIVSWTH 245
                S +  L+ +  +      L +      +  A  +G      +   V+   
Sbjct: 238 VM---STINGLRYSVAQQPGLKFLNEFHRLD-VGFAFKKGTKLAPAFQAAVNKLI 288


>gi|291302059|ref|YP_003513337.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
 gi|290571279|gb|ADD44244.1| extracellular solute-binding protein family 3 [Stackebrandtia
           nassauensis DSM 44728]
          Length = 304

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 23/275 (8%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
                     +  I+    +  G++     FA    NG   G  V     +   +  +  
Sbjct: 30  TGCSLVGGDSIKKIEAGDPITLGMS-NEPPFAYKDDNGKVIGESVAIYTHILKKLGAEDG 88

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           +I+   ++       L++   D++S       LR       F    Y      ++ K   
Sbjct: 89  QIETKIVDWNSLIPGLRADDYDLISAGMFINKLR--CERAIFSEPDYICKTALLVKKGNP 146

Query: 137 ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             ++                T    LA    A   K +        ++ +A  A +  A 
Sbjct: 147 -HNLKDFGSFKKGDNRVGLVTAGAELALAEAAGVPKKNMKQLPNNNDLKSALHADQIAAI 205

Query: 195 TGDISALYALKLTNDRPSEHVILP----DIISKSPL----APAIIQGDTEWYNIVSWTHY 246
                A+  +  T++   E V  P    D   +  +           DT + + V+    
Sbjct: 206 ALTSPAMNYMADTSNGAFETVKPPFGPKDENGEEQIAGAGGAVFRDDDTNFRDAVN---- 261

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281
                EEL   + +++   K T      ++   D 
Sbjct: 262 -----EELAKIKTSVDSWLKITGEFGFTKYEYPDP 291


>gi|284032887|ref|YP_003382818.1| extracellular solute-binding protein family 3 protein [Kribbella
           flavida DSM 17836]
 gi|283812180|gb|ADB34019.1| extracellular solute-binding protein family 3 [Kribbella flavida
           DSM 17836]
          Length = 285

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 75/253 (29%), Gaps = 26/253 (10%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILG----------DIKKRGFLKCGIN-TGLVG 46
           +     +  ++ +  ++ +     T +S              +K  G    G +      
Sbjct: 4   RTAVAVLATIVAVGLSACAPEDEPTGSSTPSGPDACSKEKLALKVPGTFTVGTDKPAYAP 63

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +       + KG++     A++  +    S++++  +       A               
Sbjct: 64  WFVDDDPSNGKGYESAVTYAVAEHLGFAASEVKWQTVQFN---AAFAPGPKKFDLDVNQI 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS---QLSGASICVQAGTTTELTLADY 163
           ++  +    + F    Y   Q  I      I++     +L+ A +  Q GTT+   L D 
Sbjct: 121 SISEDRRKAVDFSSGYYDVRQTVITTAGSKIANAKKVAELADAKLGAQVGTTSYTMLRDQ 180

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA-LYALKLTNDRPSEHVILPDIIS 222
            K       P VF+  +    A +  + D    D+    Y      D       LP    
Sbjct: 181 IKPKQ---TPAVFDTNDLAVQALKNKQIDGIVVDLPTGFYMTAAQLDNGKIVGQLPAGGQ 237

Query: 223 KSPLAPAIIQGDT 235
                  + +G  
Sbjct: 238 AEQFGFVLEKGSP 250


>gi|225375400|ref|ZP_03752621.1| hypothetical protein ROSEINA2194_01025 [Roseburia inulinivorans DSM
           16841]
 gi|225212736|gb|EEG95090.1| hypothetical protein ROSEINA2194_01025 [Roseburia inulinivorans DSM
           16841]
          Length = 954

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 64/199 (32%), Gaps = 12/199 (6%)

Query: 3   KDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K     I+  ++ FF++           +I  +  ++ G      GF ++  NG++ G+ 
Sbjct: 7   KKIRHGIIIFVMAFFSAIPFVVYG---KNIDSKETIRIGY-IDYGGFIDLDENGEYTGYG 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL--GLAF 118
           V+    ++           Y+          L+S +ID++ +    T  RE        +
Sbjct: 63  VELLDKIAEYTGWKYE---YVYDTWDNVLKKLESGEIDMICQA-QKTPEREERFLLSKYW 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      +   +   +     +G  +     +     L +Y + ++  +    +  
Sbjct: 119 AGTEACVLYARMDDDRYYYNDYEAFNGIRVAGLKESFQNDDLKEYAQKNDFSFELKEYMT 178

Query: 179 VEEIDAAYRAHRCDAYTGD 197
            EE   A      DA    
Sbjct: 179 TEECFQALEEGAVDAVVQG 197



 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 9/222 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +  I+ +  +          F+    +G+ +G  VD    +  +   +         + +
Sbjct: 269 IEYIRAQKQVNIAFINNRPPFSMENDDGEIEGIIVDLVSRIRESSGLNLQYTMLE--SGQ 326

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
                L+    D+++                   + Y      +  +     +       
Sbjct: 327 RVIDYLEKHPADLVAGVVVENPA-FTKSDYLVSDVIYTGEVALVCRQGMN-YTPGDAENK 384

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            I     +     L +Y +A+  ++  +     EE      +  CD +      +    L
Sbjct: 385 YILAITKSYA--ALENYIQANYPEFEIVKCTTTEECMELLNSGECD-FMAQNVNVVTPLL 441

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTE--WYNIVSWTHY 246
              R     +LP++  + P+       D      +I++    
Sbjct: 442 QKPRYEGLTVLPNLSKEEPMGIVGKNSDENKILMSIINKCIT 483


>gi|146329577|ref|YP_001209516.1| extracellular solute-binding family protein [Dichelobacter nodosus
           VCS1703A]
 gi|146233047|gb|ABQ14025.1| bacterial extracellular solute-binding family protein
           [Dichelobacter nodosus VCS1703A]
          Length = 244

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 77/262 (29%), Gaps = 37/262 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MYK F    L L +     F+               K  +N      A    +G + G D
Sbjct: 1   MYKTFSKMALILCLTPAFLFAQ------------TYKVVVNPNSPPKAFRDESGLFIGID 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A++ +   +   +++   +  ++   +     D ++ +   T  R+   G+    
Sbjct: 49  VDIIKAIAQSKGFE---VEFFGSD--KKLPTIDDGSND-IAPSIVITDDRKAKYGV--SD 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  K    +++  L      V   T     L +          PI  +   
Sbjct: 101 SYFTGYTTALHKKALADNNLENLPSDRTAVVFDTNKHKLLKE------AGLSPIKADTTF 154

Query: 181 EIDAAYRAHRCDAYTGDISA-------LYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
              A     + D +  D S           LK        H +L +          + + 
Sbjct: 155 LGIAMVFQGKADYFVSDDSILKYTIKQNPKLKADLTNLMVHGVLEESH----YGFVVKKD 210

Query: 234 DTEWYNIVSWTHYAMVTAEELG 255
            TE  N ++     +    E  
Sbjct: 211 QTELLNKINAGLAEIKANGEFD 232


>gi|116696359|ref|YP_841935.1| periplasmic solute binding protein [Ralstonia eutropha H16]
 gi|113530858|emb|CAJ97205.1| periplasmic solute binding protein [Ralstonia eutropha H16]
          Length = 249

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 69/236 (29%), Gaps = 26/236 (11%)

Query: 24  ASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A     I  RG L   +       F   + NG+  G D+D  R L+  +     ++++  
Sbjct: 8   APEFARIASRGELVVAVLKVDQPPF-FQERNGELSGLDIDLARELARKL---NVRVRFNR 63

Query: 83  --LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF--------IMH 132
                      L   Q D+       TL R     ++F        +           M 
Sbjct: 64  DATTFDGVVKLLAQGQADVAISKLSRTLPR--MQIISFSTPYLRLNRALLLNRVKFAQMA 121

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           + + +  V +   +SI V   ++    + + F       +   +   +E   A    R  
Sbjct: 122 RGRPVPEVIRAYDSSIGVVGNSSYSEYVVNNFPKA----YVTAYPTWDEALKALNDGRVA 177

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTH 245
           A           ++    P+  + L  +  +     L  A+          V+   
Sbjct: 178 AVY--RDEFEVKRVLKADPTAALRLRVVTLQDLEDTLGIAVNVSAPALLGFVNQFL 231


>gi|330686394|gb|EGG97994.1| ABC transporter, substrate-binding protein, family 3
           [Staphylococcus epidermidis VCU121]
          Length = 285

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 12/252 (4%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKANGDW 56
           M +      +++L L +    S S +            +K  ++  +   +     N  +
Sbjct: 1   MKRIKMYLMLTVLVLSVSLLYSCSNDNEQHATKSHPKEIKVALSAEVNPPYLYTDKNNHF 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+++ + L   +       +Y     +   + + S + D+       T  RE     
Sbjct: 61  IGLDMEYMKLLEKKL--PQYDFKYEVGEEESNLVGIGSNKFDMGINWFFKTPEREKQFLY 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA---HNMKYHP 173
              P +Y      +  K   I  +S L+   +   A +    ++   +       +    
Sbjct: 119 QDVPYSYALPMLAVNKKNNDIHQLSDLTQKRLTPMAPSGGLFSILKQYNQTHDKKIDIDT 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I      +        R DA   +       K   D+  E V +  I+ K PL     + 
Sbjct: 179 IQSPSNGDNLKMVGNGRRDAMFLN---WNTYKAVQDKVHEDVKIGGIVKKEPLHIVYNKD 235

Query: 234 DTEWYNIVSWTH 245
           + + ++ +    
Sbjct: 236 NQQLHDDIDQAT 247


>gi|295099960|emb|CBK89049.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Eubacterium cylindroides T2-87]
          Length = 275

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 75/243 (30%), Gaps = 28/243 (11%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEV-----------KANGDWKGFDVDFCRALSSA 70
            +               G+      F               ++G   G+DV   + ++  
Sbjct: 19  ASGGNTETTSDDNTFVVGMECAYAPFNWKTSEETDTSVPLGSSGYADGYDVRVAQYIADE 78

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  D   ++   ++      AL S +ID +         RE   G  F    Y      +
Sbjct: 79  LGMD---LEIKTISWDGLLPALDSGEIDAVIAGMTANEEREE--GADFTTPYYDSEGMIM 133

Query: 131 M-HKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           +  K    ++ +     SG ++  Q GT  +  +      +++       ++  E+  A 
Sbjct: 134 IVRKDSEEATYTDIQQFSGKNVVGQKGTNYDDVIDQIQGVNHVTPK----QQYGEMIVAL 189

Query: 187 RAHRCDAYTGDISALYALKLTNDRPS----EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           +    D  T +++    +   N   +    +     +  +   +A      D++++  V 
Sbjct: 190 QQGDVDGITAEMAVAEGVIAANPDLTVVQFDEGKGFEADTTVSIALKEGTRDSDFFKKVQ 249

Query: 243 WTH 245
              
Sbjct: 250 EAL 252


>gi|291527965|emb|CBK93551.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium rectale
           M104/1]
          Length = 504

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 6/105 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +  G LK G N     +     +    G D+D  +A++  +  D   +Q   +       
Sbjct: 175 RSNGTLKVGTNAEFPPYEYY-EDNKVTGIDMDIMQAIADELGMD---MQVEDMQFDSIIA 230

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           A+ S ++D+ +     T   +    + F        Q  I+   +
Sbjct: 231 AVSSGKVDVGAAGFTVTE--DRQKNVDFTDTYITTKQEIIVKDSQ 273


>gi|299541859|ref|ZP_07052182.1| amino-acid ABC transporter extracellular-binding protein ytmK
           precursor [Lysinibacillus fusiformis ZC1]
 gi|298725597|gb|EFI66238.1| amino-acid ABC transporter extracellular-binding protein ytmK
           precursor [Lysinibacillus fusiformis ZC1]
          Length = 287

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 73/235 (31%), Gaps = 14/235 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54
           M K+       + +      +   S     K  G       +K   +      + +  NG
Sbjct: 1   MKKNKIFQFAAIGLASIALLAGCNSGESADKDAGDGEKVRTVKVAYDQASKPISYIDDNG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G+DV+  + +   +  D    +Y+   + +  + ++  +  +  +N  +T  R    
Sbjct: 61  NPTGYDVEVMKLV-DELLPDYQF-EYVGTTSDDLLIGVEQGKYQVGVKNAFFTQERTEKF 118

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYH 172
                 +        +  + +G+ +++     G S+   A    + T+ D +   N    
Sbjct: 119 IFPKEFLGLSSAGLVLRKEDEGVKTLADFAKKGYSLAPIAANNAQYTIIDEYNTANPDNK 178

Query: 173 PIVFERVE---EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
             +        ++       R D             L  D P  + +  D++   
Sbjct: 179 VKLEAGDAFTVDVVQWVNEGRVDGGVMIEGPFKQQVLAEDGPY-YNLKDDVVYNE 232


>gi|118470185|ref|YP_887850.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171472|gb|ABK72368.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 279

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 16/257 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              ++         + +   S+L   +++G+L+  +      + +++ +G   G + D  
Sbjct: 7   LAAALGACTFTEPGTGAPKGSVLDRGRRQGYLRVAVF-NEPPYTKLEVDGTVTGAEPDVL 65

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA+   +  D   I+   +       +L+S Q+D+++        R   +  +   I   
Sbjct: 66  RAVLQRLGID--DIRGARIEYDAMIPSLKSGQVDVIAAGLFMKQSRCAEVAYSEPVIVST 123

Query: 125 DGQGF---IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +              I  V    G  I V  G   E  L     A   +   ++      
Sbjct: 124 ESFAVPPGNPAGITTIRDVLDNPGMKIAVLPGGFEEGIL---IAAKVPQSQRVIVRDNVS 180

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWY 238
              +  A R DA+     +L  +   N        + D I  +P      A  Q  T+  
Sbjct: 181 GVESLAAGRVDAFLLPTLSLRGMAQVNKS----FEVTDPIEDAPATGSGAAFEQSQTDDV 236

Query: 239 NIVSWTHYAMVTAEELG 255
              +          E  
Sbjct: 237 ARYNEVLDEFKKGPEFA 253


>gi|269796732|ref|YP_003316187.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542]
 gi|269098917|gb|ACZ23353.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542]
          Length = 335

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 86/248 (34%), Gaps = 19/248 (7%)

Query: 17  FTSFSTNASIL--GDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFD 73
            T+ S  A  L     +    LK  ++  +   A +        G + D    +  A+  
Sbjct: 65  TTTESAEAIALLPEAYQDVDTLKVAVSAYVAPLAFLADDEKTPIGNETDIAYLIGDALGK 124

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           D   +Q       +  LA+QS  +D    N   T  R+      F      D  G+++  
Sbjct: 125 D---VQLEVKAWADWPLAIQSGDVDATISNVTVTEERKEL--FDFS-SYRVDQLGWLVQA 178

Query: 134 KKG----ISSVSQLSGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAA 185
                  I   + ++G ++ V +GT  E  L  + +A+        +   FE   +   A
Sbjct: 179 DNEDITSIDEAADVAGLTVAVGSGTNQEKILLAWDEANQAEGLDPVNIEYFENDGDTTLA 238

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSW 243
            ++ R DA  G  +          +  + V   +        +A A ++G+     I + 
Sbjct: 239 LQSGRIDATFGPNATSAYKAAVAPQDFKVVGTVNGGWPETAQIAAATLKGNDLAPAITAA 298

Query: 244 THYAMVTA 251
            ++A+   
Sbjct: 299 INHAIEDG 306


>gi|256391965|ref|YP_003113529.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256358191|gb|ACU71688.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 294

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 82/267 (30%), Gaps = 14/267 (5%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRAL 67
                     +   + + L  +  +G L    +T     + +     D KGF+     A+
Sbjct: 33  AATGTSTGSGAPDCSPATLHLV-AKGTLTIATDTPAYAPWFDNNTPSDGKGFESAVAYAV 91

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++ +    S+++++       + A   K  D        T  R+    + F    Y   Q
Sbjct: 92  AAKLGFTQSQVKWVTEPFDNSY-APGPKNFDFDLNQISITDERKK--AVDFSSGYYTVTQ 148

Query: 128 GFIMHKKKGISSVSQLSG---ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           G I  K    +  + L+G   A I VQ GTT+   +            P VF   ++   
Sbjct: 149 GVITLKTSKYAGATSLAGLKPAKIGVQVGTTSMQAVQ---GKIAPSQQPAVFTTTDDEVN 205

Query: 185 AYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVS 242
           A +  + DA   D+    Y    + D            S          +G+      V 
Sbjct: 206 ALKNGQIDALVTDLPTVFYLTASSIDNGKVVGQFDYTDSGVEQFGALFAKGNP-LVGCVD 264

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTT 269
                + +  EL          S +  
Sbjct: 265 GAIDQLKSGGELAALTTQWLSTSANAP 291


>gi|256827870|ref|YP_003156598.1| PAS/PAC sensor signal transduction histidine kinase
           [Desulfomicrobium baculatum DSM 4028]
 gi|256577046|gb|ACU88182.1| PAS/PAC sensor signal transduction histidine kinase
           [Desulfomicrobium baculatum DSM 4028]
          Length = 1080

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 84/248 (33%), Gaps = 16/248 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              ++L L +    +    A           +    +     +  + A+G+ KG  VD  
Sbjct: 15  LVGAVLVLFLQMVLASGALA-------APEKIVVADDKDYPPYMFLDASGEPKGILVDIW 67

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +  S         +++  +   E   A++  + D +      T  RE    L    I   
Sbjct: 68  QLWSRKTG---IAVEFQLMEWNEALAAVRDGRADAV-GGVARTPQREEMFELT-TQIAVI 122

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               F   +  GI  V  L+G SI + +G        D   + + +     F    ++ A
Sbjct: 123 PSAIFFHDQLGGIKDVKDLTGFSIGIVSG----DAARDVVLSRHPQLRFATFPGAGDLVA 178

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A  +     +  D+         ++  S+     +++S   +  A+ + ++E  ++V   
Sbjct: 179 AAISGEIKVFISDVPVARHYLARHEGGSDFRQAMELVSTDSMHGAVRKNNSELLHVVQGG 238

Query: 245 HYAMVTAE 252
              +  +E
Sbjct: 239 FDQITESE 246


>gi|148257524|ref|YP_001242109.1| putative periplasmic-binding protein [Bradyrhizobium sp. BTAi1]
 gi|146409697|gb|ABQ38203.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 265

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 90/272 (33%), Gaps = 22/272 (8%)

Query: 1   MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVG--FAEVKANGD 55
           M K  ++   +++  +   F++ +  AS+  +I   G L+  +  G  G  F  VK++  
Sbjct: 1   MLKWHWLRNAALIAAVFALFSNGADAASLKEEIAPTGKLRVAVAVGPAGGAFWCVKSDSG 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           + G  V+  +A+++        ++++         A+           T      E    
Sbjct: 61  YTGVPVELGKAMAAQAG---VPVEFVE---HPNANAIVEDAAQGAWDVTFIPKDAERESK 114

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHP 173
           L+F P+       FI+     I +++ L   G  +     TT         K        
Sbjct: 115 LSFGPVYDSVDTTFIIRAGLDIPNIAALDQAGHEVAAINDTTVLRATKGLMKKA----TV 170

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
             F+  +E+ A   A   DA       L  L           +L D   K+  A A+   
Sbjct: 171 TGFKSYDEVHALLSAGEIDALALARDQLTILAKQIPG---TKVLSDTFKKTDTAVAVPLK 227

Query: 234 DTEWYNIVSWTHYAMVTAEELG--ITQKNINQ 263
             +    V+           L       N+++
Sbjct: 228 HPQSQAFVTKFMTDAKANGLLKKAYGANNLSE 259


>gi|217979148|ref|YP_002363295.1| extracellular solute-binding protein family 3 [Methylocella
           silvestris BL2]
 gi|217504524|gb|ACK51933.1| extracellular solute-binding protein family 3 [Methylocella
           silvestris BL2]
          Length = 294

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 66/216 (30%), Gaps = 15/216 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   ++    F     +G   GFD+D  RA+   +                   AL++ 
Sbjct: 66  LRFLTDSDYPPFHFEMPDGALAGFDIDLARAICETL---KLSCTIQARRFDTLVDALKAD 122

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAG 153
           + D +  +       +    L F      +   F+  ++  +  +S   L G  I V A 
Sbjct: 123 EGDAIIASLRI--DAKARETLDFTVPYAKNPARFVRLRQTQLGEASPETLRGKFIGVVAK 180

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T  E  L  YFK          F+    +  A +    D   GD +AL        R   
Sbjct: 181 TAHEAYLDAYFK----GSTRKTFDSQTALTDALKNGDVDVIFGDGAALSVWLQGPARDCC 236

Query: 214 HV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                  L        +  A+ + +      + +  
Sbjct: 237 AFSGGSFLESHFFGDGVGIALKKDNPALRQALDYAL 272


>gi|209551327|ref|YP_002283244.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537083|gb|ACI57018.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 265

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 62/221 (28%), Gaps = 14/221 (6%)

Query: 34  GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
             +             V    G   G++ D    ++  +     K++Y   +      A+
Sbjct: 32  KSVVVVTENAYPPLQFVDPKSGKPIGWEYDAMNEIAKRL---NFKVEYQNTSWDAMIQAV 88

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASI 148
              Q +     T  T+  +    + F        Q  +      +     S +      +
Sbjct: 89  SDGQYN--IGMTGITIKEDRKQKVDFSDPYMRSQQFMLVRGDEKRFTDGKSFAAFKDGLV 146

Query: 149 CVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             Q GTT     + +    +       +FE       A +A   D    D +A       
Sbjct: 147 GAQPGTTPFYTAVYEVLDGNEQNPRIKLFETFGATVQALKAGDVDVVLTDGTAGKGYVDA 206

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           ++      ++ + +          +G ++    V+    A+
Sbjct: 207 SN--GALKLIGEPLGTEDFGFIFPKG-SDLVAPVNGAISAL 244


>gi|54296019|ref|YP_122388.1| hypothetical protein lpp0036 [Legionella pneumophila str. Paris]
 gi|53749804|emb|CAH11184.1| hypothetical protein lpp0036 [Legionella pneumophila str. Paris]
          Length = 247

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 62/214 (28%), Gaps = 14/214 (6%)

Query: 36  LKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           L  G  +    F           ++ GF+++    +   I    +K QY PL  ++    
Sbjct: 25  LVIGTLSYNPPFETQVNDSSKKNEFYGFEIELMDEICERI---NAKCQYKPLLFEQILAE 81

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S  I++   + + T  R  S    F          F++     I  +  L G +I + 
Sbjct: 82  INSGAINLGIGSINITPER--SERFLFSLPYKASYHQFLIPSNSNIKKIDDLKGKTIGIH 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+ T   L  YF   N       +E   ++       +  A   +             P
Sbjct: 140 LGSPTIDYLKVYF---NNNIQFKYYETFMDLLNGLTDPQVSAIVTNSDQAQYWASI--TP 194

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              ++                   E    ++   
Sbjct: 195 DCKLLGDSFPFGIGFGVVARLDQAELIEKINQAL 228


>gi|271970518|ref|YP_003344714.1| amino acid ABC transporter periplasmic-binding protein
           [Streptosporangium roseum DSM 43021]
 gi|270513693|gb|ACZ91971.1| amino acid ABC transporter, periplasmic-binding protein, putative
           [Streptosporangium roseum DSM 43021]
          Length = 286

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 79/254 (31%), Gaps = 16/254 (6%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRA 66
           + +        + + +   L   K  G L  G +      + +     + KGF+     A
Sbjct: 26  TAVKAAPSAPATCAKDQLTL---KTPGKLTIGTDKPAYEPWFKDDDPANGKGFESAVAHA 82

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++  +  +  ++ +  +     F A  +KQ D        T  R     + F    Y   
Sbjct: 83  VAKQLGFESGEVAWATVKFDTAF-APGAKQFDFDLNQVSVTPDRAKV--VDFSKGYYTVK 139

Query: 127 QGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           Q  +       +S +    L  A I VQ GTT+   + D  K       P V+    +  
Sbjct: 140 QAVVALDGSKAASATDLAALKDAKIGVQVGTTSLQAVKDVIKPA---AEPNVYNEQIDAV 196

Query: 184 AAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIV 241
            A +  + DA   D+  A Y      +             +         +G       V
Sbjct: 197 NALKNKQVDAVVVDLPTAFYVTAAQVENSKIVGQFGAASGTPEVFGAVFEKGSP-LVGCV 255

Query: 242 SWTHYAMVTAEELG 255
           +     + ++ EL 
Sbjct: 256 NEAIDKLTSSGELA 269


>gi|291524539|emb|CBK90126.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium rectale DSM
           17629]
          Length = 504

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 6/110 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +  G LK G N     +     +    G D+D  +A++  +  D   +Q   +       
Sbjct: 175 RSNGTLKVGTNAEFPPYEYY-EDNKVTGIDMDIMQAIADELGMD---MQVEDMQFDAIIA 230

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           A+ S ++D+ +     T   +    + F        Q  I+   +  SS+
Sbjct: 231 AVSSGKVDVGAAGFTVTE--DRQKNVDFTDTYITTKQEIIVKDSQSGSSI 278


>gi|87309627|ref|ZP_01091761.1| putative extracellular solute-binding protein [Blastopirellula
           marina DSM 3645]
 gi|87287391|gb|EAQ79291.1| putative extracellular solute-binding protein [Blastopirellula
           marina DSM 3645]
          Length = 301

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 82/264 (31%), Gaps = 21/264 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVD 62
             ++++   ++   +     +S L  I++ G ++ G       +   V   G   G   +
Sbjct: 17  ILWITVTGSVVWRVSHPPQPSSALERIRRTGAVRIG-FANEPPYGYYVTTTGQITGEAPE 75

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + +   +     +I+ +          L++ + D+++     T  R     + F   T
Sbjct: 76  IAKVILHRLG--AKQIEPVVTEFGALIPGLKAGRFDLIAAGMYVTPQRAK--EIDFSNPT 131

Query: 123 YFDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           Y  G+GFI+     +       V+    A I V  G+             N     +VF 
Sbjct: 132 YAIGEGFIVRAGNPLHLHSYQDVAANPQARIGVMGGSVEHGYAQQLGVPEN---RIVVFP 188

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-------PSEHVILPDIISKSPLAPAI 230
                     A+R DA    I  +  L    D        P E+ ++         A   
Sbjct: 189 DYRSAIDGITANRIDAAAATILTVNDLLAKADDDRIESAEPFENPVIDGKSILGYGAFGF 248

Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254
            + D E     +      V   E 
Sbjct: 249 QKHDDELRLAFNQEIADFVGTPEH 272


>gi|330982503|gb|EGH80606.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 290

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 89/257 (34%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVISFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKG--ISSVSQLSGAS---ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +       + S+  ++G +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVAGNTKVRLATQPGSNQVQEAKDSGIANG---NVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTN-----DRPSEHVILPDIISK---SPLAPAIIQGDTEW 237
            +A R D      + + +L         +R      +PD   K   +  A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKANSADIERALPFEQIPDASGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EQAFNEQLAKLRASGEL 263


>gi|238923861|ref|YP_002937377.1| amino acid ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
 gi|238875536|gb|ACR75243.1| amino acid ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
          Length = 508

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 6/110 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +  G LK G N     +     +    G D+D  +A++  +  D   +Q   +       
Sbjct: 179 RSNGTLKVGTNAEFPPYEYY-EDNKVTGIDMDIMQAIADELGMD---MQVEDMQFDAIIA 234

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           A+ S ++D+ +     T   +    + F        Q  I+   +  SS+
Sbjct: 235 AVSSGKVDVGAAGFTVTE--DRQKNVDFTDTYITTKQEIIVKDSQSGSSI 282


>gi|312866156|ref|ZP_07726377.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
 gi|311098560|gb|EFQ56783.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           downei F0415]
          Length = 289

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 79/264 (29%), Gaps = 22/264 (8%)

Query: 2   YKDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K F    + ++++  T     F+        +     LK         +  V   G   
Sbjct: 8   KKWFIAGGILVLLIGGTFIGRHFAGQGVNSNKVT---TLKIAHTQNYAPYDYVDDKGKHT 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G++V+  +A+   +     K  Y   + ++  + L+S + DI  +   +T  R     + 
Sbjct: 65  GYEVEVLKAIDKKL--PQYKFDYTGTSDEDLLIGLESGKYDIGIKGAWYTKERAQKFIIP 122

Query: 118 FRPITYFDGQGFIMHKKK-----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                     GF + K        I S +Q SG  + +         + DY K H     
Sbjct: 123 -DNPIGASVIGFTIRKDDKEKFKDIDSFAQSSGKLVPISPQNAQWNVIEDYNKKHKEHTI 181

Query: 173 PIVFE---RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            +       + +  A     R DAY       +   + +   + H     +         
Sbjct: 182 DLKAAESFTMADAYAWVLEGRYDAYFDIK-LSFEQAVKDKDGAYHKYADQLTWVPYKGIE 240

Query: 230 I---IQGDTEWYNIVSWTHYAMVT 250
               I  +T     V     A+  
Sbjct: 241 TYPLIHRNTSNKKFVKDYTKAIKE 264


>gi|261213326|ref|ZP_05927607.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|260914933|gb|EEX81794.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
          Length = 269

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 65/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F      G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 38  LRFITTVDFPPFNRRNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 96

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V AG
Sbjct: 97  QADAIIAG--WEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAG 154

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +    
Sbjct: 155 TAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSAC 210

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ Q ++   +  +    A+  
Sbjct: 211 CTFTDGPYLAPQYLGSGLSIAVTQQNSALASAFNNALQALQQ 252


>gi|149190043|ref|ZP_01868320.1| transglycosylase, Slt family protein [Vibrio shilonii AK1]
 gi|148836073|gb|EDL53033.1| transglycosylase, Slt family protein [Vibrio shilonii AK1]
          Length = 524

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 82/250 (32%), Gaps = 23/250 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V +L L +      S   S L +IK+RG L+ G     + +  +  +G   G D +
Sbjct: 16  KLLSVCLLTLGMAGCQIDSDPKSELENIKERGVLRVGTLNNQLSY-YIGPDG-PTGLDYE 73

Query: 63  FCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
             R  +  +      K  Y   +    F ALQ  +IDI++     +  R           
Sbjct: 74  LARQFADELGVRLEMKPAYRQAS---LFPALQKGEIDIIAAGLSQSPERIKHFRAG-PAY 129

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGAS------------ICVQAGTTTELTLADYFKAH-N 168
            Y   Q      +    ++ QL                  +   +  E TLA+    +  
Sbjct: 130 YYVSQQVVYKKGQWRPRNLEQLLNNQQELIDKADGEEVFAIVKDSHFEQTLANVANQNPE 189

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
            +Y+      V ++       +   +T   S   +L        +  +  ++    P++ 
Sbjct: 190 FRYYIDANADVNDLLKQVSEGQLK-FTMADSVELSLSQRIY--PDLALAFEMTEDQPISW 246

Query: 229 AIIQGDTEWY 238
            + + + E  
Sbjct: 247 YMRKSEDESL 256


>gi|17987910|ref|NP_540544.1| arginine-binding periplasmic protein [Brucella melitensis bv. 1
           str. 16M]
 gi|260563383|ref|ZP_05833869.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           melitensis bv. 1 str. 16M]
 gi|265999628|ref|ZP_06111756.1| bacterial extracellular solute-binding protein [Brucella melitensis
           bv. 2 str. 63/9]
 gi|17983646|gb|AAL52808.1| arginine-binding periplasmic protein [Brucella melitensis bv. 1
           str. 16M]
 gi|260153399|gb|EEW88491.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           melitensis bv. 1 str. 16M]
 gi|263095011|gb|EEZ18719.1| bacterial extracellular solute-binding protein [Brucella melitensis
           bv. 2 str. 63/9]
 gi|326408336|gb|ADZ65401.1| extracellular solute-binding protein family 3 [Brucella melitensis
           M28]
 gi|326538052|gb|ADZ86267.1| extracellular solute-binding protein family 3 [Brucella melitensis
           M5-90]
          Length = 269

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 16/223 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F      G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 38  LRFITTVDFPPFNRRNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 96

Query: 96  QIDILSRNTDWTLL-REISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQA 152
           Q D +    D T   RE      F          F     K     +        + V A
Sbjct: 97  QADAIIAGWDPTDRNREK---FTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIA 153

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP- 211
           GT  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +   
Sbjct: 154 GTAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSA 209

Query: 212 ----SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
               ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 210 CCTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 252


>gi|22536321|ref|NP_687172.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|25010207|ref|NP_734602.1| hypothetical protein gbs0132 [Streptococcus agalactiae NEM316]
 gi|76798972|ref|ZP_00781172.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77409056|ref|ZP_00785774.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|77411816|ref|ZP_00788151.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
 gi|77414941|ref|ZP_00791039.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
 gi|22533144|gb|AAM99044.1|AE014197_12 amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|23094559|emb|CAD45777.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76585667|gb|EAO62225.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77159009|gb|EAO70222.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
 gi|77162151|gb|EAO73127.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
 gi|77172350|gb|EAO75501.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|319744066|gb|EFV96443.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 516

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 75/260 (28%), Gaps = 30/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD----- 55
           M K        L+I F    S        I+   +L+ G+      F   + +       
Sbjct: 1   MKKILLSLFTALLITFGGMTS--------IQADEYLRVGMEAAYAPFNWTQNDNTNGAVP 52

Query: 56  -------WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV               K+  +    +    AL S ++D++      T 
Sbjct: 53  IEGTDQYANGYDVQV---AKKLAKKLNKKVVVVKTKWEGLVPALTSGKLDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F    Y      +++ +   ++   +S             + L +     N
Sbjct: 110 ERKK--EINFSKPYYISEPTLVVNAEGKYTNAKNISDFKNAKVTAQQG-VYLYNLIDQIN 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE---HVILPDIISKSP 225
                +      ++  A  +   DAY  +     + +  N +      H       + + 
Sbjct: 167 GVKKEVAMGDFNQLRQAVESGVVDAYVSERPDATSAQTANPKLKMIELHQGFKTSDADTN 226

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           ++  + +GD      V+   
Sbjct: 227 ISVGMRKGDNRINQ-VNQVL 245


>gi|237808615|ref|YP_002893055.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
 gi|237500876|gb|ACQ93469.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
          Length = 273

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 86/289 (29%), Gaps = 32/289 (11%)

Query: 1   MY-----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M      K     +    +  F S S +AS          LK G +     +  ++   +
Sbjct: 1   MKGMHFAKKTATILAAFGLASFLSQSASASEP--------LKIGTDLTYPPYNYLEGK-E 51

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             GFD +F R ++  +   P    ++        + +  K+ D+++     T  R   + 
Sbjct: 52  AAGFDAEFMRLVAKELNTTP---TFMDTRFANLIMGVNLKKFDVIASTLYVTPERANQIE 108

Query: 116 LAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLAD-----YFKAHN 168
                     G   +  K           L G  +    G      L         K   
Sbjct: 109 YI---PYMKTGGVLLALKDGSFKPQKPEDLCGKKVSSIQGAAWISKLKTVSETYCAKQGL 165

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                  F    E   A  +H  DA   D       K+  D+  + V+  +II    +  
Sbjct: 166 DAIDVREFPTSPEASQAVLSHAVDAQFEDAGV---AKVAADKSGKLVLTSEIIYPVVVGL 222

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           A+ +G+T     +      + T ++        +       + +++  L
Sbjct: 223 AVKKGNTALVETLKTAIGKVETTDDFKALLAKYS--VATPDDAEIKAAL 269


>gi|311894708|dbj|BAJ27116.1| putative amino acid ABC transporter substrate-binding protein
           [Kitasatospora setae KM-6054]
          Length = 295

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 11/222 (4%)

Query: 32  KRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K G L    +      + E  A  + KGF+     A++  +     +++++       + 
Sbjct: 55  KAGQLTVATDSPAYSPWFEDNAPSNGKGFESALAYAVADRLGFTKDQVKWVVEPFDSSY- 113

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS---SVSQLSGAS 147
           A  +K  D        T  R+    + F    Y   QG ++ K    +   S+  L  A 
Sbjct: 114 APGAKDFDFDVNQISVTPARQK--AVDFSTGYYTANQGVLVLKDSKFANAGSLGALKDAR 171

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKL 206
           I VQ  TT+   + D  K +       V+    +   A +  + DA   D+    Y    
Sbjct: 172 IGVQVSTTSYQAVKDVIKPN---PQVSVYNTTNDEIHALQNGQIDALVTDMPTVFYLANA 228

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +              S     ++   +     V+    A+
Sbjct: 229 ELENGKILGQFDYAADTSEQFGLLLGKGSRLTGCVNQALAAL 270


>gi|289625715|ref|ZP_06458669.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289646324|ref|ZP_06477667.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298486825|ref|ZP_07004881.1| solute-binding component of an ABC superfamily transporter
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298158692|gb|EFH99756.1| solute-binding component of an ABC superfamily transporter
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|320328873|gb|EFW84872.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330869652|gb|EGH04361.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330882784|gb|EGH16933.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 290

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVISFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +     ++      V+  +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG---NVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--------PLAPAIIQGDTEW 237
            +A R D      + + +L    + P     LP                A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDASGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EQAFNEQLAKLRASGEL 263


>gi|303325682|ref|ZP_07356125.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio sp. 3_1_syn3]
 gi|302863598|gb|EFL86529.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Desulfovibrio sp. 3_1_syn3]
          Length = 266

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 66/224 (29%), Gaps = 13/224 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G+       A   A G   GFD D   AL   I    ++ +++     +    + S
Sbjct: 41  VLRVGLEDHYPPMAFTDAQGKHTGFDRDMAEALCRQI---DARCEFVIEPFDDLLQKMIS 97

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +D++         R   +   F    Y     +I      ++    L G  +  Q G+
Sbjct: 98  GGLDVMIAGLAALPERRQYM--EFTEPYYRSSTIYIGRPGLPVTKEG-LRGKRLGAQTGS 154

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L   +         +V     ++         D    D  A Y    +       
Sbjct: 155 MQLDILKKEW----SDVATVVEAPFADLFGMLAGGEVDVVLADALACYDFLKSRAGKDFG 210

Query: 215 VILPDIISKSPLAPA---IIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++   +     L+ A   + +GD E    ++     M    E  
Sbjct: 211 MVGDPLQINDVLSLARIGVRKGDRELTASLNKALMTMRVNGEYN 254


>gi|206577574|ref|YP_002238972.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288935886|ref|YP_003439945.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|206566632|gb|ACI08408.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|288890595|gb|ADC58913.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 281

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 75/275 (27%), Gaps = 37/275 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +       CL+ LF     +  S     K+   +      G   +      G   GF+
Sbjct: 1   MQQRITFRQACLVTLFSGLLLSGGSTYA--KEWKSITIATEGGYEPWNLTLPGGKLSGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L   +     + + +  N       L + + D++      T  R   +   F  
Sbjct: 59  PELMANLCQRM---QIECKLVVQNWDGMIAGLNAGKYDVIMDAIVVTPERSKVVA--FTQ 113

Query: 121 ITYFDGQGFIMHKKKGISSVS--------------------QLSGASICVQAGTTTELTL 160
                   FI  K   +                         L G +I + +GT     +
Sbjct: 114 AYAATPASFIAVKGSLLPPSPTVKLHDDEKEIQAAIAPLRAALKGKTIGIASGTVYTPFI 173

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
             YFK          +    +     +A R DA   DI+         +    ++ L   
Sbjct: 174 DKYFK---DIADIREYNNSADAILDLQAERIDAVFDDITFANTTLSRPEN--NNLALSGP 228

Query: 221 ISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
           +   P+     A  +   D +    +     A + 
Sbjct: 229 LMSGPIWGGGEAMGVRLTDPDLKAKLDSAIQAALA 263


>gi|121607190|ref|YP_994997.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121551830|gb|ABM55979.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 253

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 19/232 (8%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77
           +    AS       +  LK G       F  +        G   D  +A+          
Sbjct: 18  ACGGQAS------AQAVLKVGSTPTGNPFTFLDTKTNTIDGLMADIVKAVGK---TSGFA 68

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKK 135
           +Q  P+       +L S +ID++S     T +R     + F    Y  G+G +  +    
Sbjct: 69  VQIEPMQFSALIGSLTSGRIDLISAAMFITPVR--QQVVDFSQPIYSYGEGIVVPVKDGT 126

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              S S+  G  + VQ GT     L        +     +++   ++     A R DA  
Sbjct: 127 AYRSFSEFKGKRMGVQVGTAFVEPLH----KLGIFSEVKLYDTTADLMRDANAGRIDAGV 182

Query: 196 GDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            D          N  P+            + +  A  +GDTE    V+    
Sbjct: 183 LDYPIAAYAISRNLFPNLRMATTYQPTMVNDIGIATRKGDTETMAKVNAALT 234


>gi|239621299|ref|ZP_04664330.1| glutamine-binding protein [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239515760|gb|EEQ55627.1| glutamine-binding protein [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 281

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/266 (12%), Positives = 85/266 (31%), Gaps = 15/266 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++  +           + +    +   +  G+            +G ++GFD+   + 
Sbjct: 8   IGMILPLSGLAGCGQIQVTTVSGAPEGPTIAIGVAADEPSVGAW-HDGTYQGFDITIAKY 66

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +++ +     +I +  +  + R   L + Q+D++  +   T     S  + F        
Sbjct: 67  VAAKLGYANKQIVFKQVRPENRRSMLDNGQVDMVVASWPITDG--SSAIVDFAGPYLTTS 124

Query: 127 QGFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            G ++             SV  +   ++C   G  T       F+ ++ +          
Sbjct: 125 VGLLVRSDERGRFTNDAGSVGDVGDGTVCAVKGDETVGI----FRGNHPQARIQERSSYA 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A +    DA   D++ L  L        +++ +     +     A+ QG ++    
Sbjct: 181 QCVTAVQVGSADAIASDMAVLSGL--QAANGPQYMDVIADKGEVGYGIAVSQGTSQLAQK 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266
           ++     MV        +      +K
Sbjct: 239 IAEALEDMVEDGSWTAAKDTFTSQTK 264


>gi|66046193|ref|YP_236034.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256900|gb|AAY37996.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 290

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 87/272 (31%), Gaps = 27/272 (9%)

Query: 1   MY--KDFFVSIL---CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M   K      L    L++    SF   A +L   +  G L  GI      +A +  +G 
Sbjct: 1   MKGIKTLSFPALMGSALLLNAVISFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGK 58

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G +V+  RA+   +     +      +       L + + D++         R   + 
Sbjct: 59  ATGANVEILRAILEPLGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA 116

Query: 116 LAFRPITYFDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
             F       G  FI+     ++      V+  +   +  Q G+       D   A+   
Sbjct: 117 --FSNPVTRSGGAFIVKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG-- 172

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS------ 224
            + ++F++  E  AA +A R D      + + +L    + P     LP            
Sbjct: 173 -NVVLFDKDTEALAALQAGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDASGKPG 231

Query: 225 --PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
               A  + + D  +    +     +  + EL
Sbjct: 232 WNYHAYGLPKNDPAFEQAFNEQLAKLRASGEL 263


>gi|327533787|pdb|3R39|A Chain A, Crystal Structure Of Periplasmic D-Alanine Abc Transporter
           From Salmonella Enterica
 gi|327533788|pdb|3R39|B Chain B, Crystal Structure Of Periplasmic D-Alanine Abc Transporter
           From Salmonella Enterica
          Length = 255

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 72/243 (29%), Gaps = 22/243 (9%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +  I +   L   ++          A+G  +G D++   +   +     +  +Y      
Sbjct: 2   VDSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFSSYCQSRHCKLNITEY---AWD 58

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLS 144
               A+ S Q D+       T  R+    + F    Y +    +      I  +++++L+
Sbjct: 59  GMLGAVASGQADVAFSGISITDKRKKV--IDFSEPYYINSFYLVSMANHKITLNNLNELN 116

Query: 145 GASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
             SI    G      + +  +           ++    E  A  +    D    +    +
Sbjct: 117 KYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPTYNETMADLKNGNLDLAFIEEPVYF 176

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-----------EWYNIVSWTHYAMVTA 251
             K     P E   +    +   L  A  +G             +    +S    + + A
Sbjct: 177 TFKNKKKMPIESRYVFK--NVDQLGIAFKKGSPVRDDFNLWLKEQGPQKISGIVDSWMKA 234

Query: 252 EEL 254
           E L
Sbjct: 235 ENL 237


>gi|238924364|ref|YP_002937880.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Eubacterium rectale ATCC 33656]
 gi|238876039|gb|ACR75746.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Eubacterium rectale ATCC 33656]
          Length = 273

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S + S +  IK +G +  GI T          +  W GFD D  R +   +  D   +++
Sbjct: 166 SDSDSDVDYIKSQGKMIVGI-TEFEPMDYKDKDDKWIGFDADMARLVGEKLGVD---VEF 221

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           + ++   + + L SK+ID++      T   E++  +        + Q  +  
Sbjct: 222 VVIDWDNKVMELDSKKIDVVWNGMTLTD--EVTKSMECTNAYCNNAQVVVER 271


>gi|256825961|ref|YP_003149921.1| amino acid-binding protein [Kytococcus sedentarius DSM 20547]
 gi|256689354|gb|ACV07156.1| amino acid-binding protein [Kytococcus sedentarius DSM 20547]
          Length = 327

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 69/246 (28%), Gaps = 14/246 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
                  A+ L  +K+ G +  G       ++    +G+  G  V   + + + +     
Sbjct: 29  SGGGEDGANTLEKLKEEGTITIGYAGEE-PYSFQNDDGELTGATVAIDKKVFNELG--IE 85

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++   +  +     L   + D +S        R      AF   T       ++ +   
Sbjct: 86  NVEGKQVAWEALIPGLAKGEFDAISAGMSILPER--CEKAAFADPTIMYTTALMVPEGNP 143

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
              +S L   +        T   +   +   +M     V   + +   A    R D +  
Sbjct: 144 -EGLSTLQDVADAGLTLAVTNGAIEQGYAE-DMGIDTQVVSDMPDGMDAVANQRADVFAL 201

Query: 197 DISALYALKLTNDRPSEHVILPDI---ISKSPLA---PAIIQGDTEWYNIVSWTHYAMVT 250
              +L A+   N      V  P          +        + DTE     +    A + 
Sbjct: 202 TGISLRAMAENNPDAGVEVTEPFTAVVDGVEQVGAGSTVFRKDDTELLKAYNEEL-ASIV 260

Query: 251 AEELGI 256
            EE   
Sbjct: 261 GEEQAF 266


>gi|291529373|emb|CBK94959.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Eubacterium rectale
           M104/1]
          Length = 268

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S + S +  IK +G +  GI T          +  W GFD D  R +   +  D   +++
Sbjct: 161 SDSDSDVDYIKSQGKMIVGI-TEFEPMDYKDKDDKWIGFDADMARLVGEKLGVD---VEF 216

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           + ++   + + L SK+ID++      T   E++  +        + Q  +  
Sbjct: 217 VVIDWDNKVMELDSKKIDVVWNGMTLTD--EVTKSMECTNAYCNNAQVVVER 266


>gi|167755199|ref|ZP_02427326.1| hypothetical protein CLORAM_00704 [Clostridium ramosum DSM 1402]
 gi|167705249|gb|EDS19828.1| hypothetical protein CLORAM_00704 [Clostridium ramosum DSM 1402]
          Length = 273

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 21/196 (10%)

Query: 28  GDIKKRGFLKCGINTGLVGFAE-----------VKANGDWKGFDVDFCRALSSAIFDDPS 76
             I +      G+    + F             ++ +G   G+DV   + ++ ++     
Sbjct: 24  KSIDEGDVFVVGMECNYLPFNWQTNTQSDTAVELEGSGYADGYDVYIAKEIAESLDKK-- 81

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +    L       AL+S +ID +         RE   G+ F    Y      I+     
Sbjct: 82  -LVIKKLAWNGLQPALESGEIDAIIAGMTADEEREK--GIDFTTPYYQSEMVMIVRGDDA 138

Query: 137 ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + + +        V   +T+  T+ D     N   H    +   E+  A ++   D  
Sbjct: 139 SKNYTDIQQFSGKTIVGQMSTSYDTVIDQI---NGVDHATPKQSYPEMLVALQSGEVDGI 195

Query: 195 TGDISALYALKLTNDR 210
           T ++     +  TN  
Sbjct: 196 TAELPVAQGILETNQD 211


>gi|229490096|ref|ZP_04383944.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
 gi|229322972|gb|EEN88745.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
          Length = 325

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 14/193 (7%)

Query: 23  NASILGDIKKRGFLKC-GINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            A +  + + RG ++  G              +    G + DF   ++  +     KI  
Sbjct: 62  AAKVPQEFRDRGTIRITGNAGTAPPLRFYADDDKTVIGSETDFAYLIAEVLG---LKIDL 118

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--S 138
              +  +  + + S   D    N   T  R+      F      D   F + K + +   
Sbjct: 119 QVADWAQNSVRIDSGDADAFISNVTVTEERKE--KYDFA-TYRLDTLAFEVKKDRNLSLE 175

Query: 139 SVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
               ++G  I V A T  E  L     D   A        V+++  +      + R DAY
Sbjct: 176 KPEDIAGLKIGVGAATNQEALLVKWNEDNLAAGRAPAEITVYQKTTDYYLPLSSGRIDAY 235

Query: 195 TGDISALYALKLT 207
            G   +       
Sbjct: 236 FGPNPSSQFHAAQ 248


>gi|78186897|ref|YP_374940.1| amino acid ABC transporter periplasmic protein [Chlorobium luteolum
           DSM 273]
 gi|78166799|gb|ABB23897.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chlorobium luteolum DSM 273]
          Length = 260

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L+ G ++    F+ V  +G   G+D++  R +++ +     K++ + ++      A
Sbjct: 164 DNGILRLGTSSVTEPFSFVDGSGMVVGYDIELARRVAAGL---SQKLEVVNMDFGALIPA 220

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           L S ++D+++     T  R  S  + F    Y  G   +
Sbjct: 221 LMSGKVDMIAACITITEER--SEKVLFSEPYYTGGIAAM 257


>gi|288941102|ref|YP_003443342.1| family 3 extracellular solute-binding protein [Allochromatium
           vinosum DSM 180]
 gi|288896474|gb|ADC62310.1| extracellular solute-binding protein family 3 [Allochromatium
           vinosum DSM 180]
          Length = 289

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
            F+        L  ++  G ++ G       +A V   G+  G   +  + L + +    
Sbjct: 22  SFSLGPEPDDTLARVRAEGVIRIGYAVE-PPYAFVTPGGEVTGESPEVAKILVARLG--I 78

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I +  +   E   ALQ+ +ID+++        R   +   F   T+      ++ K  
Sbjct: 79  EHIVWSQMAFSELIPALQTGRIDVIAAGLFVNAERARQVR--FSRPTFRVRPALLVAKGN 136

Query: 136 G--ISSVSQLSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
              + +   L G       V AG+  +  L     A       +          A  +  
Sbjct: 137 PYGLRACEDLLGQPELRAAVIAGSVEQALLHRVGLA---DERLVQVPDALTGYRAVESGL 193

Query: 191 CDAYTGDISA 200
            DA       
Sbjct: 194 ADALALSSPT 203


>gi|77405093|ref|ZP_00782192.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
 gi|77176236|gb|EAO79006.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
          Length = 431

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 74/260 (28%), Gaps = 30/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD----- 55
           M K        L+I      S        I+   +L+ G+      F   + +       
Sbjct: 1   MKKILLSLFTALLITSGGMTS--------IQADEYLRVGMEAAYAPFNWTQNDNTNGAVP 52

Query: 56  -------WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV               K+  +    +    AL S ++D++      T 
Sbjct: 53  IEGTDQYANGYDVQV---AKKLAKKLNKKVVVVKTKWEGLVPALTSGKLDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F    Y      +++ +   ++   +S             + L +     N
Sbjct: 110 ERKK--EINFSKPYYISEPTLVVNAEGKYTNAKNISDFKNAKVTAQQG-VYLYNLIDQIN 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE---HVILPDIISKSP 225
                +      ++  A  +   DAY  +     + +  N +      H       + + 
Sbjct: 167 GVKKEVAMGDFNQLRQAVESGVVDAYVSERPDATSAQTANPKLKMIELHQGFKTSDADTN 226

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           ++  + +GD      V+   
Sbjct: 227 ISVGMRKGDNRINQ-VNQVL 245


>gi|330969961|gb|EGH70027.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 281

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 87/272 (31%), Gaps = 27/272 (9%)

Query: 1   MY--KDFFVSIL---CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M   K      L    L++    SF   A +L   +  G L  GI      +A +  +G 
Sbjct: 1   MKGIKTLSFPALMGSALLLNAVISFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGK 58

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G +V+  RA+   +     +      +       L + + D++         R   + 
Sbjct: 59  ATGANVEILRAILEPLGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA 116

Query: 116 LAFRPITYFDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
             F       G  FI+     ++      V+  +   +  Q G+       D   A+   
Sbjct: 117 --FSNPVTRSGGAFIVKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG-- 172

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS------ 224
            + ++F++  E  AA +A R D      + + +L    + P     LP            
Sbjct: 173 -NVVLFDKDTEALAALQAGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDASGKPG 231

Query: 225 --PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
               A  + + D  +    +     +  + EL
Sbjct: 232 WNYHAYGLPKNDPAFEQAFNEQLAKLRASGEL 263


>gi|260545955|ref|ZP_05821696.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus NCTC 8038]
 gi|260097362|gb|EEW81237.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           abortus NCTC 8038]
          Length = 269

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F      G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 38  LRFITTVDFPPFNRRNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 96

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V AG
Sbjct: 97  QADAIIAG--WEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAG 154

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +    
Sbjct: 155 TAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSAC 210

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 211 CTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 252


>gi|308513222|ref|YP_003933626.1| family 3 extracellular solute-binding protein [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|307346928|gb|ADN43913.1| bacterial extracellular solute-binding protein, family 3
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 291

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 68/241 (28%), Gaps = 28/241 (11%)

Query: 28  GDIKKRGFLKCGINTGLVGFAE---VKANGDWK---------GFDVDFCRALSSAIFDDP 75
             ++++G L+  +      +       ++G            G+DV   + +++A+    
Sbjct: 39  DGLREKGELRVAMECAYAPYNWTQSTDSDGAVAIEGSSEFANGYDVKIAKKIAAAL---N 95

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++ +  +      A+QS  +D +         R     + F    Y+     +  K  
Sbjct: 96  LKLRIVKSDWDSLIPAVQSGTVDCVIAGQSIKPER--LQNVDFTKPYYYADIVTLTLKDS 153

Query: 136 GI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                +S + L+GA    Q  T                        V  +  A  +   D
Sbjct: 154 KFAKATSPADLAGAKATSQQNTIWYDL---CLPQIPQVQKLAGQNDVPAMLVALISGAAD 210

Query: 193 AYTGDISALYALKLTNDRPSE--HVILPDIISKSP---LAPAIIQGDTEWYNIVSWTHYA 247
               DI    A      + +        +         +  ++ +G+      +      
Sbjct: 211 VVVTDIPTAKAALRAYPQLTMLKFDQAKNYQVSESDVNIGISVRKGNAVLKEKIDQILDG 270

Query: 248 M 248
            
Sbjct: 271 F 271


>gi|288573449|ref|ZP_06391806.1| methyl-accepting chemotaxis sensory transducer [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569190|gb|EFC90747.1| methyl-accepting chemotaxis sensory transducer [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 579

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 73/214 (34%), Gaps = 17/214 (7%)

Query: 30  IKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           I   G LK  + +T    F     +G  KGFDVD  RA++  I      +     N +  
Sbjct: 347 ILDDGRLKVAMLDTDYGLFHF-DLHGSPKGFDVDLSRAIAEKIGVPLEIVPVPQGNGEPG 405

Query: 89  ------FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    L  K + I++     T+ R     + F P+++  GQ  +    +G++ +  
Sbjct: 406 TRSGILNQGLWGKDVHIMASAVTKTVKR--GEKVLFSPLSFASGQCAVSTSDRGLTHLRD 463

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G ++ V  G T     +D  +        +  +  ++I  A +    D    +     
Sbjct: 464 LRGKTLAVHGGLTG----SDLARELFPDGRIVEKDNWDDIFQAVKKGEADGAIVETPVFL 519

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                       V++   + +      +    + 
Sbjct: 520 QY---GSNDPSLVMVGSQMDRENYGVVMPLTTSS 550


>gi|78186723|ref|YP_374766.1| amino acid ABC transporter periplasmic protein [Chlorobium luteolum
           DSM 273]
 gi|78166625|gb|ABB23723.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chlorobium luteolum DSM 273]
          Length = 260

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L+ G ++    F+ V  +G   G+D++  R +++ +     K++ + ++      A
Sbjct: 164 DNGILRLGTSSVTEPFSFVDGSGMVVGYDIELARRVAAGL---SQKLEVVNMDFGALIPA 220

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           L S ++D+++     T  R  S  + F    Y  G   +
Sbjct: 221 LMSGKVDMIAACITITEER--SEKVLFSEPYYTGGIAAM 257


>gi|24375197|ref|NP_719240.1| extracellular solute-binding protein [Shewanella oneidensis MR-1]
 gi|24349982|gb|AAN56684.1|AE015804_6 extracellular solute-binding protein, family 3/GGDEF domain protein
           [Shewanella oneidensis MR-1]
          Length = 461

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 7/212 (3%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +R  L    +     ++ +   G   G  +D   A   A   D   I++  ++  +  LA
Sbjct: 29  ERQKLIIANSKAWKPYSYIDEQGKPSGILIDLWIAYGQANNVD---IEFQLMDWNDSLLA 85

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           ++S + DI +              L F            MH+      +  L    +   
Sbjct: 86  VKSGKADIHAGLI---RSPVRLEYLDFDEPLLEIDTQLYMHQTLLGDKLQDLLAGRLDTA 142

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G        ++ + H  +   I +   + +  A +    DA+  D        L  +  
Sbjct: 143 VGVVKGGFEQEFAQRHFPQLSLIEYIDNDLMMQAAKRGELDAFIADAQVGNFYILVANGA 202

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            E +    +    PL PA+ +G+    + ++ 
Sbjct: 203 KEFMPAQFLY-SEPLRPAVRKGNQALLSQINQ 233


>gi|193211886|ref|YP_001997839.1| extracellular solute-binding protein family 3 [Chlorobaculum parvum
           NCIB 8327]
 gi|193085363|gb|ACF10639.1| extracellular solute-binding protein family 3 [Chlorobaculum parvum
           NCIB 8327]
          Length = 383

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 16/136 (11%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F   +LC      T+ +              L          FA     G W+G  +D
Sbjct: 32  RLFIALLLCSFSGSLTAIAAE----------DELVVATKQS-PPFAMKNDKGKWEGISID 80

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RA++        K+    ++      A++   +D  +     T  RE    L +    
Sbjct: 81  LMRAIAEK---QQRKLTIREMSLTGMLEAVERGAVDAAASAITMTAERERL--LDYSYPY 135

Query: 123 YFDGQGFIMHKKKGIS 138
           +  G    + +K+   
Sbjct: 136 FHSGLAIAVREKESSW 151


>gi|70732952|ref|YP_262723.1| sensory box-containing diguanylate cyclase [Pseudomonas fluorescens
           Pf-5]
 gi|68347251|gb|AAY94857.1| sensory box-containing diguanylate cyclase, putative [Pseudomonas
           fluorescens Pf-5]
          Length = 1241

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 70/220 (31%), Gaps = 12/220 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G++     F      G ++G   D+   +   +  +   ++  P +        + 
Sbjct: 31  ELRLGVDASWPPFEYRDEEGRYQGLAADYIHLIQERLSVNLKPVE--PASWTAVLEDAKQ 88

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            ++D+L      T  R+  +   F           + H+      ++ +L G  I V   
Sbjct: 89  GKLDLLPGIMS-TPERQSYMA--FTRPYLDFPIVILAHEGGAQPHNLKELYGLKIAVVEN 145

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 L    + H+   + +    V     A      DA  GD+++             
Sbjct: 146 YAPHELL----RTHHPDLNLVAMPNVSSALQALATDEVDAVVGDLASSVWSLRQLKLDGL 201

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
           +V          LA  + + +    +I+     A ++ EE
Sbjct: 202 YVSGETPYRYQ-LAMGVPRENKVLVSILDKVL-ADLSPEE 239


>gi|325291870|ref|YP_004277734.1| amino acid ABC transporter substrate-binding protein [Agrobacterium
           sp. H13-3]
 gi|325059723|gb|ADY63414.1| amino acid ABC transporter, substrate binding protein
           [Agrobacterium sp. H13-3]
          Length = 292

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 9/164 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++  ++     F      G   GF VD  R + + +  + SK Q   L   E   AL+  
Sbjct: 61  IRFLMSVDFPPFNFTDQEGRLAGFHVDLVREICAQLKVE-SKCQVQALPFDELEAALEMG 119

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAG 153
           + + +      T   ++     F            ++K    +      LSG  + V  G
Sbjct: 120 EGEAVISGIATTA--DLRKSFTFSRPYLLLPARLAVNKAAKFTGSGADALSGKKVGVVTG 177

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +  E  L  +F   + +     F   E +  A +  + DA   D
Sbjct: 178 SRHEQMLKAFFPKASAEG----FNGYEPMYEALKTGKVDAVFAD 217


>gi|257061207|ref|YP_003139095.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
 gi|256591373|gb|ACV02260.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
          Length = 285

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 73/233 (31%), Gaps = 12/233 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82
           L +I + G LK GI    V F     N +  G  +DF       L   +  +   I+   
Sbjct: 30  LEEINRTGLLKVGIREDAVPFGYRDLNNNLTGLCLDFINVFHQQLKKQLNKEIILIKIYK 89

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSV 140
                RF  +  + I +         + +    + F    +  G   ++       +   
Sbjct: 90  STLFNRFDLVSDRIIYLECGPNTIRDIPD--YNVQFSNPFFITGTQLLIKANNEEKVDLE 147

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           S L    I +   T+ +  L+  +   N                A +  + D +  D   
Sbjct: 148 SNLQDIKIGILVNTSNQQLLSTRYPLANF-VEFQGVTGRYRGVQALQGDKIDGFASDGIL 206

Query: 201 LYALK--LTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           L         +   +++++P   +  +     I + D EW N V+       T
Sbjct: 207 LIGEATLQGLNLGKDYIVVPQFPLDCAKYGLIIPKNDPEWLNFVNSVIQIPQT 259


>gi|218247457|ref|YP_002372828.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           8801]
 gi|218167935|gb|ACK66672.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8801]
          Length = 285

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 73/233 (31%), Gaps = 12/233 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82
           L +I + G LK GI    V F     N +  G  +DF       L   +  +   I+   
Sbjct: 30  LEEINRTGLLKVGIREDAVPFGYRDLNNNLTGLCLDFINVFHQQLKKQLNKEIILIKIYK 89

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSV 140
                RF  +  + I +         + +    + F    +  G   ++       +   
Sbjct: 90  STLFNRFDLVSDRIIYLECGPNTIRDIPD--YNVQFSNPFFITGTQLLIKANNEEKVDLE 147

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           S L    I +   T+ +  L+  +   N                A +  + D +  D   
Sbjct: 148 SNLQDIKIGILVNTSNQQLLSTRYPLANF-VEFQGVTGRYRGVQALQGDKIDGFASDGIL 206

Query: 201 LYALK--LTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           L         +   +++++P   +  +     I + D EW N V+       T
Sbjct: 207 LIGEATLQGLNLGKDYIVVPQFPLDCAKYGLIIPKNDPEWLNFVNSVIQIPQT 259


>gi|317487170|ref|ZP_07945971.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
 gi|316921571|gb|EFV42856.1| bacterial extracellular solute-binding protein, family 3 [Bilophila
           wadsworthia 3_1_6]
          Length = 222

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 73/220 (33%), Gaps = 14/220 (6%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           +      F+   A G   GFD +   AL  A+          PL        ++  ++D+
Sbjct: 1   MEDDYAPFSFP-AEGTQAGFDPEIAEALCKAM---RRSCTVEPLAFGTLLEKMRRGELDM 56

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +         R   +   F    Y     ++        S   L G  + VQ  T  E+ 
Sbjct: 57  IVAGLAKNEQRLAYM--DFTNSYYHSRSIYLGLPGSVAVSAEGLKGKRVGVQDHTQQEIF 114

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L  ++         I F    ++  A+ A + DA   D  + Y   L ++R     IL D
Sbjct: 115 LRSHWV---NVAEIIRFPTYGQLIDAFCAGQLDAILVDGLSGY-EFLQSERGQPFAILDD 170

Query: 220 II-SKSPLAPA---IIQGDTEWYNIVSWTHYAMVTAEELG 255
            +     LA A   + + ++E    ++     +    E  
Sbjct: 171 PLPPDEDLAYAHIGVRKNNSELIEAINEAIVHIKLNGEYD 210


>gi|261885183|ref|ZP_06009222.1| CjaC [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 120

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
             L  G +     F  +  N    GFD+D   A+S     +    +++ +       AL+
Sbjct: 21  KTLIFGSDAEYPPFGYMDENNKIAGFDIDLVDAISKKAGFEY---KFIKVGFDALIPALK 77

Query: 94  SKQIDILSRNTDWTLLREISLGLAFR 119
             +ID ++ +   T  R+ S+  ++ 
Sbjct: 78  VGKIDAIAASMSATTERKKSVDFSYT 103


>gi|222056308|ref|YP_002538670.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. FRC-32]
 gi|221565597|gb|ACM21569.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. FRC-32]
          Length = 821

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 82/258 (31%), Gaps = 26/258 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           K + + +L ++++   + S  A     L        ++  ++     F     +G  KG 
Sbjct: 12  KKYHLVLLLMMVIAIAAPSFAADPGPSLQR-----SIRVVMDDNYPPFVFRDRDGRIKGI 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            +D  R          ++ +   ++  +    +   + D++         R+      F 
Sbjct: 67  IIDQWRLWEKKT---STRAEISAMDWADAQRLMADGEFDVI-DTMFRNEKRDKL--YDFT 120

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                            GI  +  L+G ++ V+AG      + D  ++H +  + I F  
Sbjct: 121 KPYASIPVPIFFRSDISGIRDIQDLAGFAVGVKAG----GNIIDVLRSHGIN-NLIQFNS 175

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E I  A R H+ + +T D    Y          ++     +     +            
Sbjct: 176 YEAIVTAARDHKVNVFTVDEPPAYYYLYKFGIWEQYRATKPL----YIGQFHRGVKKGNK 231

Query: 239 NIVSWTHYAM--VTAEEL 254
            ++    +    ++ EE 
Sbjct: 232 ELLQTVQFGFNRISKEEY 249


>gi|254459383|ref|ZP_05072804.1| Hpt sensor hybrid histidine kinase [Campylobacterales bacterium GD
           1]
 gi|207083996|gb|EDZ61287.1| Hpt sensor hybrid histidine kinase [Campylobacterales bacterium GD
           1]
          Length = 958

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 85/263 (32%), Gaps = 27/263 (10%)

Query: 1   MYKDFFVSILCL------IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   F   ++ L      +       +    +   IK+   ++    +          NG
Sbjct: 1   MKHTFLFLLITLCFNQYLLAQIPLHLTQEEQVW--IKEHKTVRVAAGSHSAPIEFRDENG 58

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
            + G  +D+ + + ++       +     +  +    L+ K+I ++S        +E   
Sbjct: 59  KYHGISIDYLKHIEASTGITFEIVS--KSSWDKDLELLRDKKISMISSTR---NTQEGEE 113

Query: 115 GLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F                   IS++++L+G  + V+ G +    LA   K    K   
Sbjct: 114 VALFSKPYLSMPINIFARNDSSYISNLNKLNGKRVAVEKGYS----LAKLLKRDYPKIIQ 169

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----A 229
           +     ++          DAY G++S +    L       H+   +I+ ++P       A
Sbjct: 170 VSVSSNKQALKMIIDGDVDAYIGNVSTVTYNILKL-----HITNVNIVGETPYTWKRSMA 224

Query: 230 IIQGDTEWYNIVSWTHYAMVTAE 252
           + +      +I+      +   E
Sbjct: 225 VRKDLPLLNSIIQKALDLIELPE 247


>gi|170723973|ref|YP_001751661.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Pseudomonas putida W619]
 gi|169761976|gb|ACA75292.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Pseudomonas putida W619]
          Length = 1247

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 65/224 (29%), Gaps = 11/224 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK G++     F      G ++G   D+      A+  D   + + P+        L+  
Sbjct: 38  LKLGVDASWPPFEFRDQEGRYQGLAADYI-----AMLQDRLGVAFKPVEPSTWTEVLEQA 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154
           +   +          E    LAF           + H+  +   ++  L G  I V    
Sbjct: 93  RESRIDLLPGVMSTPERQGYLAFTRPYLDFPIVILAHEGGQQPRTLKDLYGLKIAVVENY 152

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L    + H+   + +    V     A      DA  GD+++             +
Sbjct: 153 APHELL----RTHHPDLNLVAMPNVSSTLQALATDEVDAVVGDLASSIWSLRQLKLDGLY 208

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           V          LA A  +       I+      M T E   I Q
Sbjct: 209 VSGETPYRYQ-LAMAAPRDKKVLVGILDKVMADMSTDEIRQIQQ 251


>gi|87302929|ref|ZP_01085733.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus sp. WH 5701]
 gi|87282425|gb|EAQ74384.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus sp. WH 5701]
          Length = 154

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 30/44 (68%)

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            IR  G+ GE+++RNLG  S L++ RG N L   GGL+++PP R
Sbjct: 111 AIRAGGHVGEIYERNLGPGSPLRLERGRNRLRHAGGLLWSPPFR 154



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 32/66 (48%)

Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +  I++RG+L CG+   + GF+ V+ +G   GF +D C AL++ +     +  +    
Sbjct: 4  PTISAIRRRGYLNCGVEGTMPGFSLVEPSGRCSGFALDLCHALAAPMVCASRRSSFTTAR 63

Query: 85 AKERFL 90
          A     
Sbjct: 64 AFWWQP 69


>gi|229493077|ref|ZP_04386872.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
 gi|229320107|gb|EEN85933.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
          Length = 323

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 68/237 (28%), Gaps = 47/237 (19%)

Query: 4   DFFVSILCLIILFFTSFSTN---------------------------------ASILGDI 30
            F +S L  + L   + S+                                  A +  DI
Sbjct: 9   TFLISALATVGLLSAACSSADAESDGAQVTAAAGYNLTADQNRITTDKVDSIAAELPQDI 68

Query: 31  KKRGFLKC-GINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           + RG L+  G              +    G + DF   +   +     K+     +  + 
Sbjct: 69  RDRGTLRVTGSAGAAPPLRFYADDDTTLIGSETDFAYLIGDVLG---LKVDLQTADWAQN 125

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGA 146
           F+ + S + D    N   T  R+      F      D   F   K     I     ++G 
Sbjct: 126 FVRIDSGEADAFLSNVTVTEERKE--KYDFA-TYRLDTLAFEAKKGAGISIKEPKDVAGK 182

Query: 147 SICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            I V +GT  E  L  + + +            ++   +     ++ R DAY G   
Sbjct: 183 KIAVGSGTNQEALLVKWSEQNVAAGLAPTDISYYQNTTDYYLPLQSGRIDAYFGPNP 239


>gi|149175001|ref|ZP_01853625.1| sodium:dicarboxylate symporter family/bacterial extracellular
           solute-binding family 3 protein [Planctomyces maris DSM
           8797]
 gi|148846338|gb|EDL60677.1| sodium:dicarboxylate symporter family/bacterial extracellular
           solute-binding family 3 protein [Planctomyces maris DSM
           8797]
          Length = 724

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 57/195 (29%), Gaps = 15/195 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            +  + +  I++RG ++ G +   + F+     G   G D+D    L+  +  D   + +
Sbjct: 467 QSGETRIDRIRRRGTIRLGFDAKRLPFSYFNDRGQLVGLDIDMAHRLALDLGVDIEFVPF 526

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--- 137
            P     +   L     D+     + T+ R                   ++   + +   
Sbjct: 527 TPQTLVSQ---LNQDHFDLAMSGLEGTIERAT--AFPVADSYMDVTLALVLPDFRKVDFL 581

Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
               +   +   I V A +  +    ++F         +     E+      A   D   
Sbjct: 582 EFDKLRHSADLKIAVVANSFYDEKAHEFFP----NASFVSINSEEDFFEG-NASHADLLV 636

Query: 196 GDISALYALKLTNDR 210
                  A  L   +
Sbjct: 637 TSAETGAAWTLLYPK 651


>gi|159904565|ref|YP_001548227.1| extracellular solute-binding protein [Methanococcus maripaludis C6]
 gi|159886058|gb|ABX00995.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C6]
          Length = 248

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 76/246 (30%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++++      T         +   +  GI   +    +   NG+  GF+
Sbjct: 1   MKKAVLIILFSILVITSACTDTKGH-----FESDTITVGIYPYMP-PYQYYENGELNGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNA-KERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++    ++  +      I+++  +   E ++A  S   D+       T  RE     +  
Sbjct: 55  IELISEIAKRMDKK---IEFVETDYKYENYIAASSGSFDVSISAITKTTSREKDSVYSQL 111

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +  +     +  K  G+   +   G  I V   T         +   ++ +  + +   
Sbjct: 112 YMNSYSSLVCLDSKYSGL---TDFEGKKIGVVEDTVYVDHAE--YYKKSVNFEIVKYHNY 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +++A      D    D       K      ++  ++ +              + +  N
Sbjct: 167 YNLNSALLNGDVDGILTDYFVC---KYFMKNSADLTMIENTEIH-YFGIVSSMDNEDLIN 222

Query: 240 IVSWTH 245
            +  T 
Sbjct: 223 DIDETL 228


>gi|330806934|ref|YP_004351396.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375042|gb|AEA66392.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 188

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F   ++CL+ L   S   +A ++ DI  RG L+  +      F     +G   GF+V+ 
Sbjct: 2   RFLPGLICLLPLL--SPLAHAELIDDINDRGELRIALEANTAPFNFK-EDGKLTGFEVEL 58

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
              L+S +   P    ++  +A +    ++S + D+   +   T   E++       +  
Sbjct: 59  GEMLASELDVRPD---FVVTDAGDLMSGVESGKYDVAINHIAMTP--ELAERFDTSAVYS 113

Query: 124 FDGQGFIMHKK 134
                 +  K 
Sbjct: 114 HPDAQLLASKD 124


>gi|298717426|ref|YP_003730068.1| ABC transport system periplasmic solute-binding protein [Pantoea
           vagans C9-1]
 gi|298361615|gb|ADI78396.1| Putative ABC transport system, periplasmic solute-binding protein
           precursor [Pantoea vagans C9-1]
          Length = 299

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 80/270 (29%), Gaps = 25/270 (9%)

Query: 20  FSTNASILGDI------KKRGFLKCGIN-TGLVGFAEVKANG-DWKGFDVDFCRALSSAI 71
              N   +  I       + G L      T     + + ++     G D D  R L+ ++
Sbjct: 34  APANPQAIAKIPADFHFIEPGTLTVATAATNSPPLSLLASDNVTRIGSDPDIARLLADSL 93

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K++ +P + ++  L + + + D+   N   T  R+      F      D   F +
Sbjct: 94  G---LKLKLVPASWEDWPLGISAGRYDVAMFNIAVTEERKK--KFDFA-TYRADNHAFAV 147

Query: 132 H---KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDA 184
               K   ISS   ++G  I V +GT  E  L  + + +  K      PI          
Sbjct: 148 KSDSKISQISSPPDIAGKRIIVSSGTNQERILLSWDQQNRAKGLPAVTPIYLTDDASATL 207

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              + R DA  G  S       +  +      L              +        +   
Sbjct: 208 TLLSGRADAIFGPHSMAAWKVASRGQ----TKLVGSGPFRAWVAVTTKKGNGLAPALQTA 263

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
               +T  +         +  +  T+  V 
Sbjct: 264 LDGTITGGQYQQVLARWGEQDEAVTHSTVN 293


>gi|172062271|ref|YP_001809922.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171994788|gb|ACB65706.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 277

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 73/236 (30%), Gaps = 18/236 (7%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +        +KK G L+CG       +       G + GF  D CR     +     K++
Sbjct: 29  AAGPDAWAAVKKAGVLRCGAAVA-PPYVMRDPKTGAYSGFFSDLCRDFGQNVLK--VKVE 85

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH------- 132
           ++  +       LQS + D+   +       E    +AF          F+ +       
Sbjct: 86  FVDTSWDNIVAGLQSDKWDL---SLALNDTPEREKAVAFSVPATDYNVSFVYNRNNPKIA 142

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K     +       ++ V +GT+ +  ++   K        +     +E   +  + R D
Sbjct: 143 KNLRSLADIDKPNVTVAVMSGTSQDKAISAELKQA----RIMRLPGNDETRLSLISKRAD 198

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
                      L   +   +        +++  +A  + +   +    V  ++ A 
Sbjct: 199 LLADANITNMLLTEAHPDWAASFNPAPPLAQQEVAFGLRKDTPKADLDVLNSYLAQ 254


>gi|254701114|ref|ZP_05162942.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513]
 gi|261751648|ref|ZP_05995357.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261741401|gb|EEY29327.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
          Length = 280

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 49  LRFITTVDFPPFNRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 107

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V AG
Sbjct: 108 QADAIVAG--WEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAG 165

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +    
Sbjct: 166 TAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSAC 221

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 222 CTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 263


>gi|227547372|ref|ZP_03977421.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227212187|gb|EEI80083.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|291516777|emb|CBK70393.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
          Length = 281

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 78/238 (32%), Gaps = 15/238 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G+            +G ++GFD+   + +++ +     +I +  +  + R   L +
Sbjct: 36  TIAIGVAADEPSVGAW-HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDN 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASI 148
            Q+D++  +   T     S  + F         G ++             SV  +   ++
Sbjct: 95  GQVDMVVASWPITDG--SSAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTV 152

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           C   G  T       F+ ++ +          +   A +    DA   D++ L  L    
Sbjct: 153 CAVKGDETVGI----FRGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGL--QA 206

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               +++ +     +     A+ QG ++    ++     MV        +      +K
Sbjct: 207 ANGPQYMDVIADKGEVGYGIAVSQGTSQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 264


>gi|190574066|ref|YP_001971911.1| putative substrate-binding ABC transport protein [Stenotrophomonas
           maltophilia K279a]
 gi|190011988|emb|CAQ45610.1| putative substrate-binding ABC transport protein [Stenotrophomonas
           maltophilia K279a]
          Length = 325

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 84/279 (30%), Gaps = 30/279 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKR-----------GFLKCGINTGLVGFAEVKANGD 55
              +    L   + +     L    +            G      + G +  A+  A+  
Sbjct: 38  AGAVAATSLARANTAILKGTLDPKAQALIPAGYRFVTPGAFTVATHPGQLPLADYGADSK 97

Query: 56  -WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G + D  R ++ A+     K+  +P+   +  L L+S + D +  N   T  R+   
Sbjct: 98  GVVGIEPDIARLIADALG---LKLVIVPVAWADWPLGLESGKYDAVLSNVTVTEERKK-- 152

Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMK 170
              F     +D  G         + I   + ++G  + V A T  +  L  + + +    
Sbjct: 153 KFDFS-SYRYDLLGIYTRTDGPIQKIEKPADVAGLKVVVGASTNQDQILRQWDQQNIAAG 211

Query: 171 YHPIVFERVEEIDA---AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             P+ ++  ++      A    R D                D     V L      +  A
Sbjct: 212 LKPVEYQYFDDAVVGRLAVITGRAD--VSFEPNATGAYSARDGKVRRVGLFPGGWPNAAA 269

Query: 228 PAIIQGDTE-WYNIVSWTHYAMVTAEEL--GITQKNINQ 263
            ++         + V+      + +      + + N+ +
Sbjct: 270 ISVTTRKGSGLADAVTQALNTQIASGTYAQALKRWNVAE 308


>gi|76788643|ref|YP_328867.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding
           protein/permease [Streptococcus agalactiae A909]
 gi|76563700|gb|ABA46284.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Streptococcus agalactiae
           A909]
          Length = 516

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 74/260 (28%), Gaps = 30/260 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD----- 55
           M K        L+I      S        I+   +L+ G+      F   + +       
Sbjct: 1   MKKILLSLFTALLITSGGMTS--------IQADEYLRVGMEAAYAPFNWTQNDNTNGAVP 52

Query: 56  -------WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV               K+  +    +    AL S ++D++      T 
Sbjct: 53  IEGTDQYANGYDVQV---AKKLAKKLNKKVVVVKTKWEGLVPALTSGKLDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F    Y      +++ +   ++   +S             + L +     N
Sbjct: 110 ERKK--EINFSKPYYISEPTLVVNAEGKYTNAKNISDFKNAKVTAQQG-VYLYNLIDQIN 166

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE---HVILPDIISKSP 225
                +      ++  A  +   DAY  +     + +  N +      H       + + 
Sbjct: 167 GVKKEVAMGDFNQLRQAVESGVVDAYVSERPDATSAQTANPKLKMIELHQGFKTSDADTN 226

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           ++  + +GD      V+   
Sbjct: 227 ISVGMRKGDNRINQ-VNQVL 245


>gi|261757537|ref|ZP_06001246.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99]
 gi|261737521|gb|EEY25517.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99]
          Length = 269

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 38  LRFITTVDFPPFNRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 96

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V AG
Sbjct: 97  QADAIIAG--WEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAG 154

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +    
Sbjct: 155 TAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSAC 210

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 211 CTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 252


>gi|261320833|ref|ZP_05960030.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
 gi|261293523|gb|EEX97019.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
          Length = 275

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 44  LRFITTVDFPPFNRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 102

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V AG
Sbjct: 103 QADAIIAG--WEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAG 160

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +    
Sbjct: 161 TAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSAC 216

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 217 CTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 258


>gi|90410889|ref|ZP_01218903.1| putative transglycosylase, Slt family protein [Photobacterium
           profundum 3TCK]
 gi|90328102|gb|EAS44413.1| putative transglycosylase, Slt family protein [Photobacterium
           profundum 3TCK]
          Length = 514

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 83/241 (34%), Gaps = 12/241 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           +++ F + L L +L    +  +    L  I++ G ++ G        +    N    G D
Sbjct: 11  FRELFAATLVLTLLSGCQWQDDNLTDLEKIRESGVIRVGTLNNQ--LSYYIGNDGPTGLD 68

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  +  +  +           L+    F +L+   ID+++     +  R I+   A   
Sbjct: 69  YELAQRFAQKLGVKLEMQPMFTLSG--LFPSLERGDIDVVAAGLTISKDR-IADYHAAPA 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177
             Y        + +      +   L+  S+ V  G++ E  L +  + + ++ +  I   
Sbjct: 126 YYYASQIVVYKNGQWRPRKPADLALNKGSLSVVKGSSHEKRLIELKEIYPDLTWDSIEET 185

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E+         D +T   S   AL        +  I  ++    P+A  + +   + 
Sbjct: 186 DSDELLRLVAKGELD-FTIADSVDVALSQRIH--PDVAIAMELTEDEPIAWFVNKSTDDS 242

Query: 238 Y 238
            
Sbjct: 243 L 243


>gi|302540686|ref|ZP_07293028.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302458304|gb|EFL21397.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Streptomyces himastatinicus ATCC 53653]
          Length = 312

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 93/330 (28%), Gaps = 51/330 (15%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILG--DIKKR---------GFLKCGINTGLVGFAEVK 51
           +    ++  + +L  T+  +++       +  +         G LK  +      +  V 
Sbjct: 5   RILLTALSVMPLLALTACGSDSDAAAPKKVSAKTAALGTIDPGVLKVAVQP-YAPYTTV- 62

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G   G D D     +  +      +Q    +       +QS+++DI      WT  R+
Sbjct: 63  KDGKIVGLDGDILSYAAKKLG---LTVQPETTDFAGMLAGVQSRRMDITIGGVAWTKDRQ 119

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                   P            K     +++ L G  +    G     ++     A     
Sbjct: 120 KQGLFTDPPYYSPPAMAVGSGK--TYKTINDLKGLRLGTVEGYVWVKSIKAVPGAK---- 173

Query: 172 HPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDI---------- 220
               +     +     A R D  +   +  + A K  +++     + P            
Sbjct: 174 -LRAYPDANGVFDDLAAGRIDVGFLDPLIIIAAEKERSEQLKTQYLTPPTAAQVKAKPAY 232

Query: 221 ISKSPL--APAIIQGDTEWYNIVSWTHYAMVTAEEL----GITQKNINQVSKDTTNPDVQ 274
               P      + +  T+    +S    AM    EL         +  Q  K  ++    
Sbjct: 233 EYFRPYQTGFYLPKKATKLEKAISAQIDAMYQNGELTKLIKKWGGDPEQFLKPASDVAPA 292

Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
           R  G+D+            DW    I   G
Sbjct: 293 RR-GVDR----------PADWNAPSIGTAG 311


>gi|83945562|ref|ZP_00957909.1| Hypothetical protein yfhD [Oceanicaulis alexandrii HTCC2633]
 gi|83851138|gb|EAP88996.1| Hypothetical protein yfhD [Oceanicaulis alexandrii HTCC2633]
          Length = 355

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 73/207 (35%), Gaps = 11/207 (5%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCR 65
           ++ L  ++   +        +  I +RG L              +  +G+ +G++V   +
Sbjct: 15  LASLTALVACSSPEPAGFETVDQIVERGELIVLTLES--PTTYHLDEDGEPEGYEVALVK 72

Query: 66  ALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            L+  +      ++Y P  + ++    + + +  + +     T  R     + F P    
Sbjct: 73  DLAQELG---VSVRYEPQRDLRQLLTNIAAGRGHLAAGGVTMTEARAAH--VTFGPAYKT 127

Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI 182
             +  +  +    I ++  LSG  I V  G++   TL      H  +++  +       +
Sbjct: 128 VTEQLVCRRGGPRIEALEDLSGVDIAVVQGSSYVETLQALRTDHPELEWRTVDAPSALPL 187

Query: 183 DAAYRAHRCDAYTGDISALYALKLTND 209
             A +A   D    D + +   +L   
Sbjct: 188 LEAVQAETLDCTVADSTLVAHARLRFP 214


>gi|330991448|ref|ZP_08315399.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Gluconacetobacter sp. SXCC-1]
 gi|329761467|gb|EGG77960.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Gluconacetobacter sp. SXCC-1]
          Length = 522

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 73/239 (30%), Gaps = 13/239 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVD 62
              + LC ++         A  L      G L    N  L     V         G D+D
Sbjct: 18  VLSATLCGVLALAGHARAQAPALPGFIHDGTLTVCTNPTLPPMTFVNGMDVNAVAGIDMD 77

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L++        +    +     F +L +++  +++        RE +         
Sbjct: 78  IVHTLAA---YWHVPLVITTMEFTGLFPSLAAQRCSMVASGLIRLPAREQNFD---AVAY 131

Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI-VFE 177
                  +       ++S++ LSG ++ VQAGT+    LA   +   A       I  + 
Sbjct: 132 QDTALVIVARAGTKPLASMADLSGRTVAVQAGTSYSARLARENEALAARGRPPIIIQQYP 191

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             +++       R  A+      LY  +         +++P        A  I +   +
Sbjct: 192 TEDQVVQQVLIGRVFAFASQDVELYYRQEQLHGRVGVILVPPYPEYGHFALYIRKDAHD 250


>gi|307354929|ref|YP_003895980.1| putative PAS/PAC sensor protein [Methanoplanus petrolearius DSM
           11571]
 gi|307158162|gb|ADN37542.1| putative PAS/PAC sensor protein [Methanoplanus petrolearius DSM
           11571]
          Length = 788

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 51/205 (24%), Gaps = 12/205 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               S L  +           S          +          F+    NGD +G  +D 
Sbjct: 10  RITGSFLAAVFFLLLIIPAQVSAADTAYSGDVITIVTGDNYPPFSFRDGNGDLQGISIDQ 69

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +        +        ++  +   A +S +  +L          E +    F     
Sbjct: 70  WKLWEEKTGIEAD---ITGMSWADAQAAFESGEYGVLE---TPMYTPERAEKYEFSKPYA 123

Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   + +  GIS    L G  + V +G  +   L +             ++  E+I
Sbjct: 124 EVESAIYFNSEISGISGPDSLKGFVVAVLSGDASYDYLVE-----KGVTDFAEYDSYEDI 178

Query: 183 DAAYRAHRCDAYTGDISALYALKLT 207
             A +      +  D          
Sbjct: 179 ILAAKEGDVVVFVMDSPQADYYLYK 203


>gi|161520628|ref|YP_001584055.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189353186|ref|YP_001948813.1| ABC-type polar amino acid transport system periplasmic
           substrate-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|221209882|ref|ZP_03582863.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
 gi|160344678|gb|ABX17763.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189337208|dbj|BAG46277.1| ABC-type polar amino acid transport system periplasmic
           substrate-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|221170570|gb|EEE03036.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
          Length = 280

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 82/255 (32%), Gaps = 17/255 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K G L  G +     +A +   G   GFD +F R L++ +  +P    +L     +  L 
Sbjct: 34  KPGTLLIGSDLTYPPYAYLDG-GKPAGFDAEFSRMLATHLKLEP---VFLDTRFPDLILG 89

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149
           +++++ D+++     T   +    + F P     G   ++ K       +  +L G  + 
Sbjct: 90  MKARRFDVVASALYVTP--DRVKQVDFVP-YLKTGASLLVAKGSAYRPKTPDELCGKRVG 146

Query: 150 VQAGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
              G +    L          A   +   + F    E  +A  +   D    D +     
Sbjct: 147 TIKGASWTPKLRAISTDTCKPAGRGEIAILEFPTSPEATSALMSKAVDVQIEDAAVAQG- 205

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                          ++    +   + +GD    + +         + E G   K     
Sbjct: 206 IPKQTNGRVEPSSTTLLYPIVIGLGVTKGDGGLQHALEGALNDAKRSGEYGSLVKKYG-- 263

Query: 265 SKDTTNPDVQRFLGI 279
            ++ T  DV   LG 
Sbjct: 264 LQEPTAADVAAALGT 278


>gi|296102235|ref|YP_003612381.1| amino acid ABC transporter, periplasmic amino acid-binding subunit
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056694|gb|ADF61432.1| amino acid ABC transporter, periplasmic amino acid-binding subunit
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 295

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 85/299 (28%), Gaps = 35/299 (11%)

Query: 1   MYKDFFVSILCLIIL----------FFTSFSTNASILGDI------KKRGFLKCGINT-G 43
           M       +                     + +   +  I       + G L   I+   
Sbjct: 1   MKYGLLAGLAFTAASHASINLKANELPLPVTVDQQAVAKIPAHYKFVEPGTLTVAISALN 60

Query: 44  LVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               A + ++     G D D  R L+ ++     K++ +P   ++  L + S + D+   
Sbjct: 61  SPPLALLASDNRTRIGSDPDIARLLAGSLG---LKLKLVPTAWEDWPLGITSGRYDVALV 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELT 159
           N   T  R+      F      D   F +        I+    L+G  + V +GT  E  
Sbjct: 118 NIAVTEQRKE--KFDFA-TYRVDSLAFTVKSTSPVQAINGPEDLAGKKVIVGSGTNQERI 174

Query: 160 LADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           L  + + +         P+        +   ++ R D + G  S          +     
Sbjct: 175 LLGWNEENKKAGREPALPVYLTDDASGNLYIQSGRADVFFGPQSVAAYKAALTGK----T 230

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            +  +  K        +   +    +       +T  E         +  +  T+ +V 
Sbjct: 231 RVVGLGPKKAYVATTTKKGNQLVYALQAALDGAITRGEYQKVLARWGEQGEAVTHSEVN 289


>gi|302384918|ref|YP_003820740.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
 gi|302195546|gb|ADL03117.1| extracellular solute-binding protein family 3 [Clostridium
           saccharolyticum WM1]
          Length = 290

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 80/261 (30%), Gaps = 36/261 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA-------------------------SILGDIKKRGF 35
           M K     +L +  +     ++N                          S     + R  
Sbjct: 1   MKK-MLPILLTMTAVLLAGCNSNPAPANASSAAESTEAAAVTTAAADNASTSEMDQTRKV 59

Query: 36  LKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +          ++ +  +G  W G D +    ++     +   ++   +     F  L +
Sbjct: 60  I-VATGGSGEPYSLLGEDGKTWTGIDAEMWSEIARRTGWE---VEPKQVEFSALFGELDT 115

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            ++++ +     T  R      +  P         +   K  ++S  QL G +I V  G 
Sbjct: 116 GRVNVAANCFATTPARMEKYITSH-PYYGDAQCIIVNEDKADVNSFDQLKGLTIGVAQGQ 174

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            +++++    + ++ K     +E  +         R DA     S +Y          + 
Sbjct: 175 ASQVSVEAMAETYDWKVTV--YETSDTGYQDLYLKRIDAMATTDSLVY-KYENLQN-MKF 230

Query: 215 VILPDIISKSPLAPAIIQGDT 235
            IL + +  + +A    + D 
Sbjct: 231 HILDERLMSNNVAYFFQKNDE 251


>gi|197294962|ref|YP_002153503.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|195944441|emb|CAR57043.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 286

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 70/249 (28%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    +   I     +   +  +    
Sbjct: 28  QAKEWKTVTVALEGGYAPWNLTLPGGKLGGFEPELLANVCERI---KVQCNMVAQDWDGM 84

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM----------------- 131
            L LQ+ + D+L      T  RE    L F          F +                 
Sbjct: 85  ILGLQAGKFDVLMDAISITPEREKI--LLFSRPYAATPATFAVTDTKILPKAAPGAPIVK 142

Query: 132 -------HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K    +   QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 143 LTGDANADKPTVDTLRKQLKGKTIGIQSGTVYTKFINDSFK---DIASIRVYKTSPERDL 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     D  S       L   I       A  + D +     
Sbjct: 200 DLVAGRIDASFDDVTYYAANNAKKDNASIVLAGPKLGGPIWGPGEGLAFRKQDADLKTKF 259

Query: 242 SWTHYAMVT 250
                A + 
Sbjct: 260 DTAIAAALA 268


>gi|116670304|ref|YP_831237.1| extracellular solute-binding protein [Arthrobacter sp. FB24]
 gi|116610413|gb|ABK03137.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 297

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 14/255 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           +V+    + +   +     ++L   K++GF++ GI      + +V  +G   G + D  R
Sbjct: 26  WVTSCSTVPVGGPATGATTNLLDTAKEQGFIRVGI-ANEPPYTQVSPDGKVTGCEPDVLR 84

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+   +  D   +Q +    +     L + + D+++        R     + +       
Sbjct: 85  AVCKRLGIDE--VQGIITPYESMIPGLNANRWDVIAAGLFMKQSR--CSQVLYSEPVIVS 140

Query: 126 GQGFIMHKKKG-----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            + F M K        ++ +       I V  G   E  L     A       +      
Sbjct: 141 TESFAMPKGNPKGILTVADIIANPALRIAVLPGGFEEGVLK---AAKVPASQQVKVNDGR 197

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A  A+R DA+    +        ND   +         ++    A  + DT ++  
Sbjct: 198 SGLEALTANRADAFMLP-TLSLKSLAENDGSFDITAPIKDAPRTGSGAAFRKADTSFHEA 256

Query: 241 VSWTHYAMVTAEELG 255
            +    A     E G
Sbjct: 257 YNRELAAFKATPEFG 271


>gi|114327541|ref|YP_744698.1| Gln/Arg/Lys/His-binding protein and permease [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315715|gb|ABI61775.1| gln/Arg/Lys/His-binding protein and permease protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 503

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 66/221 (29%), Gaps = 17/221 (7%)

Query: 29  DIKKRGFLKCGIN-TGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            ++    L+ G +      +     + +    G++ D    +   +  +   + ++    
Sbjct: 20  AVRAGDDLRWGADAQSDAPYIFHDPDREDRLIGYEKDIVDEIGRHLNRN---LIFVQNGW 76

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLS 144
                 L     D      + T        + F    Y   +  ++ K    + ++  L 
Sbjct: 77  DSLIPGLDRGLYDFSIDGLEITPAH--REVVDFSKPYYVTSEQLVVRKDSKGLDTLESLH 134

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++     +  E  L  +        +  V+E   +        R DA   D     AL
Sbjct: 135 GHAVGTLKASVGERILQKH-----PDINLRVYEEEIDAYTDLHNGRTDAVLLDWPI--AL 187

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +   PS  +I   I        A+ +G+    + ++   
Sbjct: 188 YYSATDPSLKLIGKPIGHLE-YGIAVRKGNQVLLDQINTAL 227


>gi|116695002|ref|YP_840578.1| ABC-type transporter, periplasmic component [Ralstonia eutropha
           H16]
 gi|113529501|emb|CAJ95848.1| ABC-type transporter, periplasmic component [Ralstonia eutropha
           H16]
          Length = 302

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 79/284 (27%), Gaps = 26/284 (9%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            +    +      F +    A  L  I++ G LK  +  GL  F+ +  +    G DV  
Sbjct: 25  RWLCGAMLAAAALFCAQPAQAD-LARIRQTGTLKVAVYKGLPPFSAIAGS-QAAGIDVAL 82

Query: 64  CRALSSAIFDDPSKIQYL-PLNAKERFLALQSKQIDILSRNTDWT--------LLREISL 114
            RAL   +    + + +    +  +   A+  +   +     D           +RE   
Sbjct: 83  ARALGKELGLSVALMPFDADESMADDLRAMVWRGHYLGYGPADVMLHVPVDRAFMRENDK 142

Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            L F P             +   +  +  L+G      AG+     L             
Sbjct: 143 ALIFAPYYRETFVLVQDRERVPAVRGLEDLAGQPTGAAAGSAGANALLSGAGGALRD-KV 201

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
            ++   +    A  +    A     +   +      +           +  P AP + Q 
Sbjct: 202 RIYPEADAALRALFSGEIAAAMVTRAQYESALKAAGQSGARFA-----ATEPSAPLLPQR 256

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
                  V         A E  + +     +S   +N ++ R  
Sbjct: 257 GWAVGMAVK--------AGERELAEALEKALSALRSNGELARIF 292


>gi|91780135|ref|YP_555342.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91692795|gb|ABE35992.1| ectoine-binding protein / hydroxyectoine-binding protein
           [Burkholderia xenovorans LB400]
          Length = 280

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 79/259 (30%), Gaps = 9/259 (3%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   ++    ++   +  +     L  ++++GF +  I      F  V A+G   G 
Sbjct: 1   MKLKGILITGTLSLLSLTSLAAVAQDKLAQLREQGFARIAI-ANEPPFTAVGADGKVTGA 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D  RA+   +  +                 L   + D ++     T  R  ++  +  
Sbjct: 60  APDVARAVFRKLGVNDIVASIS--EYGAMIPGLAVGRHDAIAAGLFMTPQRCAAVAYSQP 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIVFE 177
            +   +         + I +  +++     V    G TTE  LA    A       ++  
Sbjct: 118 VLCAVEAFAVKKGNTRSIKTYEEIAKDPKAVIGVEGGTTEQKLA--TAAQIPAERVVIVP 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
             +      +  R DA+   + ++  L       +   I P   +       A  + DT 
Sbjct: 176 DGQSGLKMLQDGRIDAFALPLLSISDLLAKAKDANLESIAPVQGTPVQCDGVAFRKQDTA 235

Query: 237 WYNIVSWTHYAMVTAEELG 255
             +        M  + E  
Sbjct: 236 LRDAFDVELKKMKESGEFA 254


>gi|146338611|ref|YP_001203659.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
           ORS278]
 gi|146191417|emb|CAL75422.1| Putative ABC transporter (substrate binding protein)
           [Bradyrhizobium sp. ORS278]
          Length = 296

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 71/250 (28%), Gaps = 22/250 (8%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAI 71
                  +  A    D K +  L   IN    G+  +       + GFD+D   A+   +
Sbjct: 33  AATPAGCAALAEKYPDWKGK-TLVNAINPHTPGYESIDPKDPSKYVGFDIDLGEAIGDCL 91

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K+ Y P+        L S Q DI+  +   T  R       F         G ++
Sbjct: 92  G---FKLTYKPVTFAALLTTLASGQADIVISDIYATKERAK--AADFI-TYSKVFDGVLV 145

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTL-------ADYFKAHNMKYHPIVFERVEEIDA 184
            K                  A  T  + +           +A   +    +++       
Sbjct: 146 AKGNPKGINGINMSMCGAAAAENTGYVEVPLIQELGPKCKEAGKPEPTLQLYDNNANCIQ 205

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYNIVS 242
           A  A R D Y  D++ +           E  I   I    P     A+ +   ++ + V 
Sbjct: 206 AILAGRADTYVNDVNTVDQAVKAYPDKLEKAIAVTI----PYSVGIAVPKDKPKFRDAVM 261

Query: 243 WTHYAMVTAE 252
                +  A 
Sbjct: 262 AALIEVQKAG 271


>gi|303240874|ref|ZP_07327386.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Acetivibrio cellulolyticus CD2]
 gi|302591602|gb|EFL61338.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Acetivibrio cellulolyticus CD2]
          Length = 852

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 75/254 (29%), Gaps = 18/254 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K      + +  +F +              +  +          +   + NG + GF++
Sbjct: 3   FKILRFMFILIASIFISCQVVYGD-------KPVVVYQSEDNYPPYKFSQ-NGKFNGFEI 54

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    + +    D + +++   +    +  + + +ID           R+    L F  +
Sbjct: 55  ELSNIIFAD--GDYN-VEFSTDSWSRVYDGVANDKIDT-CGLVAINEERKR--ELLFSNV 108

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                          I SV  L    + V     TE  L D     N       F  VEE
Sbjct: 109 VLKGYISIYTRSDFNIVSVKDLEQYHVGVGYKQYTEEILHDVVGIKNYS----TFSTVEE 164

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A      D    +  A+    +  +  +        +    LA  + +G+ +    V
Sbjct: 165 ALEALDKGTIDVLFENQEAVNYYLIEKELKTRIKSQESNLYPVQLAYGVRKGNKDLVKYV 224

Query: 242 SWTHYAMVTAEELG 255
           +     +++  E  
Sbjct: 225 NKKLEYLISTGEYE 238


>gi|242240070|ref|YP_002988251.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242132127|gb|ACS86429.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 285

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 43/280 (15%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  +  F   + L +L  T     +      K+   +          +      G   GF
Sbjct: 1   MKQRHLFRQAMALGLLSVTVMFGAS---AQAKEWKTVTIATEGSYEPWNLTLPGGKLGGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +    L   +     + + +  N       LQ+ + D++      T  R+    + F 
Sbjct: 58  EPELMEILCQRM---NLQCKLVVQNWDGMIAGLQAGKFDVMMDAIVITPERK--QVVDFS 112

Query: 120 PITYFDGQGFIMHK----------KKGISSVSQ--------------LSGASICVQAGTT 155
                    FI  K          +  I                   L G +I + +GT 
Sbjct: 113 VPYASTPASFITLKGKPALPVEAGQSMIKLADDPAQIAPAVAGLRGALQGKTIGIASGTV 172

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +  YFK          +    +     +A R D    D++   ++    +    ++
Sbjct: 173 YTPFIDKYFK---DIATVREYTASADAILDLQAGRIDTVFDDVTFANSMMSKPEN--NNL 227

Query: 216 ILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
            L       P+     A    + D E            + 
Sbjct: 228 TLGGPQLTGPIWGDGEALGFRKTDPELKAKFDAAIKTALA 267


>gi|297517324|ref|ZP_06935710.1| glutamate and aspartate transporter subunit [Escherichia coli OP50]
          Length = 154

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%)

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D + L
Sbjct: 2   DLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALL 61

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +    +P    I+    S+      + + D ++  ++  T   + T+ E  
Sbjct: 62  AGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 115


>gi|56751437|ref|YP_172138.1| hypothetical protein syc1428_c [Synechococcus elongatus PCC 6301]
 gi|81298887|ref|YP_399095.1| extracellular solute-binding protein [Synechococcus elongatus PCC
           7942]
 gi|56686396|dbj|BAD79618.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81167768|gb|ABB56108.1| extracellular solute-binding protein, family 3 [Synechococcus
           elongatus PCC 7942]
          Length = 253

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 63/223 (28%), Gaps = 14/223 (6%)

Query: 35  FLKCGINTGLVGFAEV-----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
            L+         F           G + GFD++    ++  +     KIQ+   + ++  
Sbjct: 27  TLRALTTDNYPPFEFRIEETTDRPGVY-GFDIELAETIARNLG---LKIQFQVGSFEQLL 82

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L + Q D+       T  R  +  + F    +      +    + + +   LSG  + 
Sbjct: 83  PNLMAGQGDLAIAAISITPER--AQRVDFSEPYFEAQDSLVTLNSRLLPADQNLSGLRLG 140

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
              GT      A   K          +  V  +  A      D      S + A+    D
Sbjct: 141 YLQGTVQAQRAAQ-LKTRYPTLQTKSYVDVTALLKALTTREVD-IALVESVVAAIFAQ-D 197

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                V   +  ++   A A  +G                + E
Sbjct: 198 NAQLVVQKLNGATQERYAIAFPKGSPYRDRFNREIRRLRDSGE 240


>gi|241667433|ref|ZP_04755011.1| polar amino acid uptake transporter [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254875982|ref|ZP_05248692.1| polar amino acid uptake transporter [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254842003|gb|EET20417.1| polar amino acid uptake transporter [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 248

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/217 (10%), Positives = 56/217 (25%), Gaps = 27/217 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K  +++I  L  +  ++   +            +  G       F+     +  + G 
Sbjct: 1   MKKIIYLTI-ALFFVITSNCYAD------------IIVGTTGDYAPFSIYDKNDNKFSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +  + A   +   I+++          L+  + D+       T  R+     +  
Sbjct: 48  DIDLIKTFAKA---NNEDIKFVKTTWATAEGDLKDSKFDVFVGGMTITSTRQAKFIFSTP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
             ++               S + +   +  +      T E       K        ++  
Sbjct: 105 LGSFSKAAMTNCKNLPKFKSFADIDNPNTLIIENRGGTNENFALQKIK----NAQLLIIA 160

Query: 178 RVEEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
             +    +          D    D   +      N  
Sbjct: 161 DNKLAVKSITDGIDGIYPDIMFTDSPEIAYQHSINPN 197


>gi|193214093|ref|YP_001995292.1| Lytic transglycosylase catalytic [Chloroherpeton thalassium ATCC
           35110]
 gi|193087570|gb|ACF12845.1| Lytic transglycosylase catalytic [Chloroherpeton thalassium ATCC
           35110]
          Length = 506

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 35/238 (14%)

Query: 27  LGDIKKRGFLK-----CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           L  IKKR  L      C        F      G   GF+ +    L+  +  D   +  +
Sbjct: 46  LPQIKKRKKLIAITSYCATCY----FIYR---GKPMGFEYELLERLAKHLDVDLEIV--V 96

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK------- 134
             N  +    L   + DI++     T  R+    LAF        Q  +  K        
Sbjct: 97  AENLNDVVKMLNEGKGDIIAYGMTITQARQK--KLAFTEHYTTTRQVLVQRKPNNWRRMK 154

Query: 135 ------KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV---EEIDAA 185
                   I +   L G S+ V+  ++    L           + +        EE+   
Sbjct: 155 HHQIEKSLIRNQIDLIGKSVHVRRNSSYYARLKTLSNELGGDINIVEVPGYLETEELIQM 214

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               + D    D +  +  K           +        +A A+ +   E    V  
Sbjct: 215 VAEGKIDYTVADQNIAFINKTYYPDLDVETPISFPQK---IAWAVRKNSPELLAAVDD 269


>gi|45358275|ref|NP_987832.1| amino acid ABC transporter substrate-binding protein [Methanococcus
           maripaludis S2]
 gi|44921033|emb|CAF30268.1| similar to amino acid ABC transporter substrate-binding protein
           [Methanococcus maripaludis S2]
          Length = 248

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 78/248 (31%), Gaps = 17/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ +  ++++     S       +  + G L  GI   +    +   N   +GF+
Sbjct: 1   MKKATFILLFSILVI----TSACTDT-KEYSESGTLTVGIYPYMP-PYQYYENDKLEGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    ++  +      ++    +    ++A +S  +D+       T  RE     +   
Sbjct: 55  IELVSEIARRMNKQIEFVE--TDDKYGNYVAARSGTVDVSISAITKTASREKDSIYSELY 112

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +  +     +  K   +   +   G  I +   T        Y    ++ +  + +    
Sbjct: 113 MNSYSSLVCVDSKYSRL---ADFEGKKIGIVDDTVYVDHAESY--KKSVDFEIVKYYNYY 167

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++++A      D    D       K       +  I+ +             G+ +  N 
Sbjct: 168 DLNSALLDGEVDGALADYFTC---KYFMKNDDDLTIIENTDIH-YFGMVSSIGNEDLINN 223

Query: 241 VSWTHYAM 248
           +     +M
Sbjct: 224 IDEVLMSM 231


>gi|297570734|ref|YP_003696508.1| amino acid ABC transporter substrate-binding protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931081|gb|ADH91889.1| extracellular solute-binding protein family 3 [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 301

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 74/289 (25%), Gaps = 44/289 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFST------------------------------NASILGDI 30
           M      +    +I    +  +                               A +   +
Sbjct: 1   MKTLKITAAAAALIFTLGACGSDATSTDADAAATTGDVRATDVSHIKKVDEIAALLPESV 60

Query: 31  KKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
              G L  G N           +G   +GFD+D   AL   +     K+           
Sbjct: 61  TADGTLTFGTNAFYAPAEFYAEDGTTLQGFDIDLAHALGQVLG---LKVSIENAEFAAVI 117

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             +  K  +           R+ ++ L          Q  +          + + G  I 
Sbjct: 118 PGI-GKTYEAGIAAISVNPERQETVDLH--QYYEAGLQWAVPAGNPKKFDPADVCGKIIG 174

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEE---IDAAYRAHRCDAYTGDISALYALKL 206
           VQ GT  +  L +     + K  P+  +R  E   I       + DA   D         
Sbjct: 175 VQTGTAQDEYLTELNTT-DCKDKPVQIQRQAEQPRISLQLAQGQLDAMFADTP--VVDFA 231

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                 +   + D I    LA A  +G       ++     ++   EL 
Sbjct: 232 VLQTNKQIEKIGDPIDVVGLAIATPKGSPT-TEAINKALQHLIDTGELA 279


>gi|190894986|ref|YP_001985279.1| putative ABC transporter substrate-binding protein [Rhizobium etli
           CIAT 652]
 gi|190700647|gb|ACE94729.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
           CIAT 652]
          Length = 259

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 85/273 (31%), Gaps = 29/273 (10%)

Query: 14  ILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68
           +   ++ + +A         ++K G L+CG       +       G++ GF  D C+  +
Sbjct: 1   MAGLSATAAHAQTAEGYWQGVQKAGALRCGAAVA-PPYVMRDPATGEYTGFFADLCKEFA 59

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +   P    ++          LQ+ + D+   +         ++ + F          
Sbjct: 60  DVLKVKPE---FVDTTWDNIVAGLQAGKWDL---SLALNRTPARAMAVQFSIPAMEYQIS 113

Query: 129 FIMHKKKG-----ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              +K        ++SV+ +   G ++ V +GT  +  ++   K        +     +E
Sbjct: 114 LAYNKNNPKIAAGVASVADIDKAGVTLAVMSGTAQDKAISAAVK----NATIMRLPGNDE 169

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A  + R D              T   P   V L    + +    A      +     
Sbjct: 170 TRLAVTSKRADILVDASDTN--QLFTQSNPDWAVALNPTPALAKQGVAF-GLPHQLSAAD 226

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
                  +   E  +   +++++ +   +  ++
Sbjct: 227 VEVINIFL---EERVATGHVDELIRKAVDEVLK 256


>gi|37526197|ref|NP_929541.1| virulence sensor protein BvgS precursor [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|30314690|emb|CAD52875.1| Pvp sensor [Photorhabdus luminescens subsp. laumondii]
 gi|36785627|emb|CAE14577.1| Virulence sensor protein BvgS precursor [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 1203

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 68/234 (29%), Gaps = 17/234 (7%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
              FS        IKK   +   +N     ++ +  NG   G DVD  R     +  + S
Sbjct: 296 AAIFSAQEKAW--IKKNPVINVALNRNTPPYSFLDKNGQITGLDVDILR-----LLGEKS 348

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135
            I +  +        ++ +  D  ++ T      E +  L+F           I    + 
Sbjct: 349 GIIFNFIPTDGAV-GIKKRLEDGEAQMTSMLNTPERNRWLSFSHPYGTVEWVMITRNERN 407

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
                 QL    + +Q G      L  Y      +   I  + V +      A   DA  
Sbjct: 408 APYEFEQLKHHRVAIQRGNALLSLLKQY-----PEIFIIEVDSVTQGIDMVLAGAADATF 462

Query: 196 GD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              ISA Y                  +     A        +  +I++ +  A+
Sbjct: 463 DSLISADYLQASRYGANISIQFFKGSLQPEQYAVIPAY--PQLVDILNKSIDAL 514


>gi|270157022|ref|ZP_06185679.1| putative arginine-binding periplasmic protein [Legionella
           longbeachae D-4968]
 gi|289164563|ref|YP_003454701.1| arginine-binding periplasmic protein [Legionella longbeachae
           NSW150]
 gi|269989047|gb|EEZ95301.1| putative arginine-binding periplasmic protein [Legionella
           longbeachae D-4968]
 gi|288857736|emb|CBJ11580.1| putative arginine-binding periplasmic protein [Legionella
           longbeachae NSW150]
          Length = 250

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 60/197 (30%), Gaps = 12/197 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK GI      F    A+ +  GFD++   AL + +        + P+  ++   A+  +
Sbjct: 25  LKVGIGRFYPPFIMQGADNELFGFDIETAIALCNIM---HRACTFHPMRFRDLLPAINRR 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG 153
           +ID+       T  R     + F          F+ +        +++ L+   I V   
Sbjct: 82  EIDMAINAISITPERLKL--VNFSNPYLLTYSRFLTNHTYAHQPFNLALLNNKRIGVDGD 139

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +  E  +      +            EE+  A    + D    D  +       +     
Sbjct: 140 SIFEDEVKGMDIKNPTIVPFYGVHSTEEMLEALENEKIDFVILDNPSALYWAANSS---- 195

Query: 214 HVILPDIISKSPLAPAI 230
              +  +    P    +
Sbjct: 196 -GEVRTVGRPIPYGHGL 211


>gi|290512970|ref|ZP_06552334.1| octopine/nopaline transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
 gi|289774583|gb|EFD82587.1| octopine/nopaline transport system substrate-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 283

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 76/275 (27%), Gaps = 37/275 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +       CL+ LF     +  S     K+   +      G   +      G   GF+
Sbjct: 3   MQQRITFRQACLVTLFSGLLLSGGSTYA--KEWKSITIATEGGYEPWNLTLPGGKLSGFE 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L   +     + + +  N       L + + D++      T  R   +   F  
Sbjct: 61  PELMANLCQRM---QIECKLVVQNWDGMIAGLNAGKYDVIMDAIVVTPERSKVVA--FTQ 115

Query: 121 ITYFDGQGFIMHKKKGISSVS--------------------QLSGASICVQAGTTTELTL 160
                   FI  K   +                         L G +I + +GT     +
Sbjct: 116 AYAATPASFIAVKGSLLPPSPTVKLHDDEKEIQAAIAPLRAALKGKTIGIASGTVYTPFI 175

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
             YFK          +    +     +A R DA   DI+         +    ++ L   
Sbjct: 176 DKYFK---DIADIREYNNSADAILDLQAERIDAVFDDITFANTTLSRPEN--NNLALSGP 230

Query: 221 ISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
           +   P+     A  +   DT+    +     A + 
Sbjct: 231 LMSGPIWGGGEAMGVRLTDTDLKAKLDSAIQAALA 265


>gi|262276491|ref|ZP_06054300.1| putative transglycosylase Slt family [Grimontia hollisae CIP
           101886]
 gi|262220299|gb|EEY71615.1| putative transglycosylase Slt family [Grimontia hollisae CIP
           101886]
          Length = 515

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 15/238 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I+ RG L+ G     + +  +  +G   G D +     + ++               
Sbjct: 35  LEKIRDRGVLRVGTLNNKLSY-YIGPDG-PTGLDYELASQFAHSLGVKLEMQP--AYTLS 90

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSG 145
             F AL+   +DI++     T  R                  +   H +    +     G
Sbjct: 91  GLFPALERDDVDIIAAGLTITKDRLEYFRPGPAYYYVTQQLVYKNGHWRPRKVTEINKGG 150

Query: 146 ASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           A + V  G++  LTL    +    +++  +     +E+       + D    D   +   
Sbjct: 151 ARVAVVEGSSHALTLQTIQRESPELEWESVTDADDDELLKQVADGKLDFTIADSVDIA-- 208

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV------SWTHYAMVTAEELGI 256
            +    PS  V L  +  + P+A  + +   +    +             + A E   
Sbjct: 209 LVQRTHPSIAVAL-SLTEEEPIAWFMKKSQDDSVYALMIEFFGKKAKNGELAALEEKY 265


>gi|167626855|ref|YP_001677355.1| polar amino acid uptake transporter [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167596856|gb|ABZ86854.1| polar amino acid uptake transporter [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 248

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/217 (10%), Positives = 55/217 (25%), Gaps = 27/217 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59
           M K      + L ++  ++   +            +  G       F+     +  + G 
Sbjct: 1   MKK-IISLTITLFLVITSNCYAD------------ILVGTTGDYAPFSTYNKNDNKFSGK 47

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D  +  + A   +   I+++          L++ + D+       T  R+     +  
Sbjct: 48  DIDLIKTFAEA---NNEDIKFVKTTWATAEGDLKNNKFDVFVGGMTITPTRQAKFIFSTP 104

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177
             ++               S + +   +  V      T E       K        ++  
Sbjct: 105 LGSFSKAAMTNCKNIPKFKSFADIDNPNTLVIENRGGTNEKFALQKIK----NAQLLIIA 160

Query: 178 RVEEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
             +    +          D    D   +      N  
Sbjct: 161 NNKLAVKSITDGIDGIYPDIMFTDSPEIAYQHSINPN 197


>gi|209518059|ref|ZP_03266889.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
 gi|209501465|gb|EEA01491.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           H160]
          Length = 286

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 70/249 (28%), Gaps = 35/249 (14%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +   +  G   +      G   GF+ +    L + I     +   +  +    
Sbjct: 28  QAKEWKTVTIALEGGYAPWNLTLPGGKLGGFEPELVANLCARI---KIQCNLVAQDWDGM 84

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-------- 140
              LQ+ + D+L      T  RE  +   F          F +   K +S          
Sbjct: 85  IPGLQAGKFDVLMDAISITPEREKIIA--FSKPYAATPATFAVTDTKVLSKAAPTAQPVK 142

Query: 141 ----------------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                            QL G +I +Q+GT     + D FK         V++   E D 
Sbjct: 143 LTGDPKTDQPTVDALRKQLKGKTIGIQSGTVYTKFINDGFK---DIATIRVYKTSPERDL 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A R DA   D++   A     +  S       +   I       A  + D +     
Sbjct: 200 DLVAGRIDASFDDVTYYAANMDKKENASIVLAGPKIGGPIWGPGEGLAFRKQDADLKTKF 259

Query: 242 SWTHYAMVT 250
                A   
Sbjct: 260 DAAITAAQA 268


>gi|150403652|ref|YP_001330946.1| extracellular solute-binding protein [Methanococcus maripaludis C7]
 gi|150034682|gb|ABR66795.1| extracellular solute-binding protein family 3 [Methanococcus
           maripaludis C7]
          Length = 248

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 84/261 (32%), Gaps = 22/261 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  ++++     +TN        +   +  GI   +    +   NG+ KGF+
Sbjct: 1   MKKITLIILFSILVVTSACTNTNGC-----FESDTITVGIYPYMP-PYQYYENGELKGFE 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKE-RFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++    ++  +      I+++  + K   ++A +S  +D+       T+LRE      + 
Sbjct: 55  IELISEIAKRMDKK---IEFVETDYKYGNYIAARSGTVDVSISAITKTVLREE--DSTYS 109

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +        +       + ++   G  I V   T        Y K+ N     + +   
Sbjct: 110 QLYMNSYSSLVCL-DSKYAGLADFGGKRIGVVDDTVYVDHAESYKKSVNF--EIVKYHNY 166

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            ++++A      D    D               + + + +              +    +
Sbjct: 167 YDLNSALLNGDVDGILADYFVCKY----FKNNGDDLRIIENTEIHYFGIVSSLDNEYLID 222

Query: 240 IVSWTHYAMVTA---EELGIT 257
            ++     +      EEL + 
Sbjct: 223 NINKILMGIYNDGTYEELRLK 243


>gi|284044552|ref|YP_003394892.1| extracellular solute-binding protein family 3 [Conexibacter woesei
           DSM 14684]
 gi|283948773|gb|ADB51517.1| extracellular solute-binding protein family 3 [Conexibacter woesei
           DSM 14684]
          Length = 293

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 70/218 (32%), Gaps = 11/218 (5%)

Query: 32  KRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           + G L    +      + E     + +GF+     A++  +     +++++       + 
Sbjct: 56  EDGQLTVATDKPAYPPYFEDDDPSNGRGFESAVAFAIARQLGFARDEVKWVIEPFNSSY- 114

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGAS 147
           A   K+ D        T  RE    + F    Y   Q  +  K       +S+ QL    
Sbjct: 115 APGPKRFDFDVNQISITPQRER--AVDFSAPYYTAPQAVVALKDSDAARATSLDQLKDVQ 172

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + VQ GTT+   L       +    P VF    ++  A +  + DA   D+         
Sbjct: 173 LGVQIGTTS---LDAADAQIDPSKQPKVFNDSNDVVRALKQGQVDAVVVDLP-TAFYLTA 228

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              P   ++            A++  D+     VS   
Sbjct: 229 AQVPEAAIVGQFEAPGGDAWGALLARDSSLTACVSDAI 266


>gi|218779450|ref|YP_002430768.1| histidine kinase [Desulfatibacillum alkenivorans AK-01]
 gi|218760834|gb|ACL03300.1| histidine kinase [Desulfatibacillum alkenivorans AK-01]
          Length = 1056

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 25/267 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFST------NASILG----DIKKRGFLKCGINTGLVGFAEV 50
           M  +    +LC    F            + + L      I+    L    N     F  V
Sbjct: 11  MKGNILWMLLCAAAFFMALSPALSAEEVDGASLNPASPAIQN--ELVIAHNLSHPPFKFV 68

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +G  +G  VD  R  S         +++     +E    ++     I +         
Sbjct: 69  DEDGRSQGLIVDLWRLWSQKTG---VPVRFAGAPFEETVAMVREGGAQINAGLFS---TE 122

Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           E    + F    +      + HK   GI     L G  + V AG  TE     + + H+ 
Sbjct: 123 ERQEFMDFSNPIHGVSYYIVFHKSILGIGGPEDLKGFKVGVPAGGYTEQ----FMRKHHP 178

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAP 228
                +++    +  A +      +   +  L      +   +++    +  +       
Sbjct: 179 GLDLALYKDYPALFGAAQNGEIRVFIAPVENLRDYLKKHYLTNDYRYAANLPLFVRNYRG 238

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
            I +G+ E    ++    A +T EE G
Sbjct: 239 GIAKGNKELLETINQGL-AQITPEERG 264



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 74/225 (32%), Gaps = 10/225 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G++ G   F  +   G   G   ++   L+  +  +   I +      E  +  ++
Sbjct: 535 VIRLGVDPGYEPFEFLTEGGKHAGVASEYVTLLNKRLGTNLKVIPFD--TWSEVIVQAKA 592

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153
           K +D+L      T  R+    L F        +          I     L+G  I ++  
Sbjct: 593 KGVDVLPAVM-KTESRDEY--LVFTKPYLSSPEMIFCRTDAPFIGGAEDLTGKFIALKRN 649

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +     + D  +    +   ++++   +   A  +   DAY   ++    +    +  + 
Sbjct: 650 S----YMEDRIREKYPELSLVLYDDTAQALEAVASGEADAYVNTLAHGSYVIAKYNISNI 705

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
            V  P   +   +  A+ +      +I+     ++   E   I  
Sbjct: 706 KVAAPMDGTVDGIRIAVRKDWPILRDILQKGLDSITPEEAAAIRA 750



 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 69/214 (32%), Gaps = 10/214 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L   I+T     +     G   G  VD+ +  +  +     K+ +  ++  +    ++  
Sbjct: 283 LVISISTDYQPMSFRDPFGRPAGMLVDYWKLWAETVG---QKVVFDMVDWDQSVRIVKDG 339

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154
           +    S        RE    + F    Y          +  +S   + +   SI V  G+
Sbjct: 340 EAAFHSGLYSSESRRE---WMDFSQTIYELDSNLYYLPESPVSPPLESMQDVSIGVVKGS 396

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             E    +  K        + F   E++  A    + DA+  +   +  L   +    + 
Sbjct: 397 YQEEYALNSLKE---TCTAVPFSTAEDMLYALIQGQIDAFIDESIVVDLLLTRDRFAGKV 453

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           V     +    L   + +G+ +   +++    AM
Sbjct: 454 VGHSTPLFSRSLKAGVAKGNKDLLELINQGVEAM 487


>gi|153011891|ref|YP_001373104.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563779|gb|ABS17275.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 275

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 90/282 (31%), Gaps = 25/282 (8%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA-NG 54
           M        ++    +   +    A        +I+KRG L+CG              +G
Sbjct: 1   MKLTKLITGLILGATVLAGAGQAYAQSAEGYWQEIQKRGTLRCGAAVA-PPHVIRDPQSG 59

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ G  VD C+  +        K + +          LQ+ + D+   +       + ++
Sbjct: 60  EYSGTFVDLCKKFAQDALG--VKAEIVDTTWDNIVAGLQANRWDL---SMALNQNPKRAM 114

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVS-------QLSGASICVQAGTTTELTLADYFKAH 167
            +AF           +  K     S +        ++G +I + +GT  + TL    K  
Sbjct: 115 AIAFSHPVVQYEVSGVYDKANPKFSTAPKSIADLDVAGVTIIIMSGTAIDGTLTRQIK-- 172

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 +    ++    A  + R D    D  +      T       +     ISK  +A
Sbjct: 173 --NATILRLPDIDATRLALSSRRGDILVDDSDSNTLFSATGKDRWVTLNPEPAISKQGIA 230

Query: 228 PAIIQGD--TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
             + +    ++  ++  +        E   I    I++++ +
Sbjct: 231 FGLRRDASYSDIQSLNFFIQEQTAIGEVDRIASGYIDKLAAE 272


>gi|56459696|ref|YP_154977.1| soluble lytic transglycosylase fused to an ABC-type amino
           acid-binding protein [Idiomarina loihiensis L2TR]
 gi|81362773|sp|Q5QWY4|MLTF_IDILO RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|56178706|gb|AAV81428.1| Predicted soluble lytic transglycosylase fused to an ABC-type amino
           acid-binding protein [Idiomarina loihiensis L2TR]
          Length = 455

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 20/247 (8%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K     F + +L   ++   S  T    +  +++R  L+ G        +    +   
Sbjct: 1   MPKSAVSLFAILLLAASVITACSPQTRPDAMSVVQERQVLRVGTLIN--PTSYYFDHDRE 58

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GF+ D  +  +  +  +   +     +  + F  L+  ++DI++   D T  R      
Sbjct: 59  QGFEYDLAKRFADRLGVELEMVP--RFDVNDLFTMLRRGEVDIVAAGLDRTSTRAQLFR- 115

Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171
            F P      Q  +  +        + Q++   I V  G++    L    D       + 
Sbjct: 116 -FSPPYDIISQKVVFKQGSRQRPRDLQQITDGEIVVVEGSSHHEFLKSLGDSIPTLKWRA 174

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
                    E+     +   D    D +AL   +  +    +  +   +     +A A+ 
Sbjct: 175 T--RDHDAVELLQMVISGEVDYTITDSTALDIQRRFHP---DLSVAFTVKHDQDIAWALP 229

Query: 232 QGDTEWY 238
           QG  +  
Sbjct: 230 QGKDDSL 236


>gi|229588506|ref|YP_002870625.1| hypothetical protein PFLU0963 [Pseudomonas fluorescens SBW25]
 gi|229360372|emb|CAY47229.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 256

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 63/228 (27%), Gaps = 13/228 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           R  ++  +      F      G   G +++   AL   +    + +  + +   +   AL
Sbjct: 26  RREIRFAVAAHFPPFQSRNPQGQLVGLNIELGNALCQQLNVRCTWVDQVLVENFKDLDAL 85

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQ 151
                         T  R+    ++F    Y      +  +  G+  + + L G  + V 
Sbjct: 86  LFD----AIIGIAPTPQRQRW--VSFTDNLYPFTTRLVARRSSGLMPTPASLKGKRVGVL 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  E      +           F   +E+  +  A   DA       +    L     
Sbjct: 140 LGSNREAFAQSQWAPKG--VIIKRFWLNDELVRSLVAGDIDATLQGTVEIRDALLDTPAG 197

Query: 212 SEHVILPDIISKSPLAPAI----IQGDTEWYNIVSWTHYAMVTAEELG 255
            +   L   +S   L   +       DT     ++     +    E  
Sbjct: 198 QDFDFLGPAVSAELLGHGVAIGLRTTDTALRAELNRALEQLKHNGEYQ 245


>gi|51245370|ref|YP_065254.1| Ntr family two-component system sensory/regulatory protein
           [Desulfotalea psychrophila LSv54]
 gi|50876407|emb|CAG36247.1| related to two-component system sensory/regulatory protein (Ntr
           family) [Desulfotalea psychrophila LSv54]
          Length = 930

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 82/243 (33%), Gaps = 20/243 (8%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ GI      F  V  +G  +G ++D  + +   +  +  +I+++ L+  E    L+ 
Sbjct: 34  TVRVGIFP-FSPFNFVDDSGVVQGLNIDLLQEI---VKGEKWEIEFVHLSWGEGLERLEK 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAG 153
           + ID++          E +  + +   +  +  G   +       ++  L+G  I V   
Sbjct: 90  EDIDLM---LSVARSEERAKVMDYSSESVAEFWGQVFLRADGKEKNIKDLAGKRIAVVRR 146

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             +           ++    + F   +E+  A          G     ++L+   +    
Sbjct: 147 DISGFNFIKIAAELDIHCEIVEFATQDEVFNAVHQG--IVVAGIAPQSFSLRYVKE---- 200

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
           + ++   I  SP +                   A + A  L + +K+ +     +    +
Sbjct: 201 YDLVGSSIQFSPFSVYFATKKGRHRE-----LLAQIDA-HLSVWKKDRDSFYYKSMGRWL 254

Query: 274 QRF 276
            R+
Sbjct: 255 NRY 257


>gi|116513001|ref|YP_811908.1| amino acid ABC transporter periplasmic protein [Lactococcus lactis
           subsp. cremoris SK11]
 gi|125625091|ref|YP_001033574.1| amino-acid ABC transporter extracellular binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|116108655|gb|ABJ73795.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Lactococcus lactis subsp. cremoris SK11]
 gi|124493899|emb|CAL98893.1| probable amino-acid ABC transporter extracellular binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071898|gb|ADJ61298.1| amino-acid ABC transporter extracellular binding protein
           [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 280

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 17/208 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-------GDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K   +++  L I      +  +S           +     +    +   V +     N
Sbjct: 1   MKKIKLLTLATLGIASIGLLAACSSKDNSSSKSTDKVT---TVTVATSAASVPYEYS-EN 56

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+ D  +A    +     K ++          AL   +  I + N   T  R  S
Sbjct: 57  GKMTGFEYDILKAADKDM--KDYKFEFKVYEDSAILAALDGGRAQIAANNFGKTKAR--S 112

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F               K+ I+ +SQL+G +  + AGT        + K H  K   
Sbjct: 113 EKYLFSYPVRQGIDAIFSTSKENITKISQLAGKTTEIPAGTNYGDMFESWNKNHPDKKID 172

Query: 174 IVFERVEEI--DAAYRAHRCDAYTGDIS 199
           + + +       +A  + + D      +
Sbjct: 173 VKYSQRPLADRLSAIASGQIDFLFASKA 200


>gi|326407587|gb|ADZ64658.1| amino acid ABC transporter, substrate-binding protein [Lactococcus
           lactis subsp. lactis CV56]
          Length = 280

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 17/208 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-------GDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K   +++  + I      +  +S           +     +    +   V +     N
Sbjct: 1   MKKIKLLTLATVGIASIGLLAACSSKDNSSSKSTDKVT---TVTVATSAASVPYEYS-EN 56

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+ D  +A    + D      +          AL   +  I + N   T  R  S
Sbjct: 57  GKMTGFEYDILKAADKDMKDYKF--DFKVYEDSAILAALDGGRAQIAANNFGKTKAR--S 112

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F               K+ I+ +SQL+G +  + AGT        + K H  K   
Sbjct: 113 EKYLFSYPVRQGIDAIFSTSKENITKISQLAGKTTEIPAGTNYGDMFESWNKNHPDKKIN 172

Query: 174 IVFERVEEI--DAAYRAHRCDAYTGDIS 199
           + + +       +A  + + D      +
Sbjct: 173 VKYSQRPLADRLSAVSSGQIDFLFASKA 200


>gi|297160233|gb|ADI09945.1| amino acid ABC transporter solute-binding protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 266

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 81/249 (32%), Gaps = 16/249 (6%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +         ++L  ++ +G ++ GI    + F  +  NGD+ G   +  + +   +   
Sbjct: 1   MSSADSKDGGNLLSRLRSQGTVRLGIAGE-IPFGYIDKNGDFTGEAPEIAKVIFKRLGV- 58

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
            + +Q +P         L+S+Q D++S         +    + F    Y     FI+ K 
Sbjct: 59  -AHVQPVPTEFASLIPGLRSQQFDVVSAGMYINP--DRCQQVIFSDPDYRVRDSFIVRKG 115

Query: 135 KG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               +      +  S    A  +    +     A   +   +V         A    R D
Sbjct: 116 NPKNLHKYEDFA-KSGAKLASGSAYAQIGYAVNAGVKESDIMVLPDQLAGLLAVEQGRAD 174

Query: 193 AYTGDISALY-------ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A+ G    +          ++    P + ++       +    A    +T+  +  +   
Sbjct: 175 AFAGTAVTVRNVIRQSGGRRVEATEPFQALLDGKPDVGAG-GFAFRPEETKLRDAFNAEL 233

Query: 246 YAMVTAEEL 254
           + M  + EL
Sbjct: 234 HKMKKSGEL 242


>gi|182440606|ref|YP_001828325.1| putative ABC transporter substrate-binding protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178469122|dbj|BAG23642.1| putative ABC transporter substrate-binding protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 292

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 33/284 (11%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKR-------------GFLKCGIN-TGLVGFAEV 50
              ++LC  +                                G L  G +      +   
Sbjct: 13  LSSAVLCAALAGCAPRPAEKGASDAPGATASCAPGELATQVPGKLTVGTDKPAYAPWFAD 72

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               + KGF+     A++  +  D   + +        F A  +K+ D        +  R
Sbjct: 73  DEPSNGKGFESAVAYAVAKELGYDRDAVVWQHTPFNSAF-APGAKKFDFAVNQVSISEER 131

Query: 111 EISLGLAFRPITYFDGQGFI---MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           +    +AF    Y   Q  +     K     SV+ L    +  Q GTT+   + D  K  
Sbjct: 132 KK--AVAFSSGYYDVRQAVVALKSSKAAKAKSVADLKDVKLGAQVGTTSLDFITDLVK-- 187

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKS 224
             K  P V++R +   +A +  + DA   D+          + P                
Sbjct: 188 -PKEKPAVYQRNDFAKSALKTGQVDAIVVDLP-TAFYITGAEVPEAEVVGQFAASPGEPE 245

Query: 225 PLAPAIIQGDTEWYNIVSWTHYA-----MVTAEELGITQKNINQ 263
                +   ++     VS    A      +   E       ++ 
Sbjct: 246 QFGLVL-DRESALTPCVSGAVDALRKDGTLAGLEKEWLSDAVDA 288


>gi|330816868|ref|YP_004360573.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia gladioli BSR3]
 gi|327369261|gb|AEA60617.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia gladioli BSR3]
          Length = 282

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 75/260 (28%), Gaps = 32/260 (12%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   +  L +  +  ++    A      K    +   ++     +      G   GF
Sbjct: 1   MKSKHSRLVSLLVGAVLGSAMMAGA---AQAKDWKTVTIALDGSYAPWNLTLPGGKLGGF 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + +    L +       K   +  +       LQ+ + D+L      T  RE  L L+  
Sbjct: 58  EPELVENLCA---HAQLKCNLVTQDWDGMIPGLQAGKFDVLMDAISITPDREKILALSQP 114

Query: 120 PITYFDGQGFIMHKKKGISSVS----------------------QLSGASICVQAGTTTE 157
                        K    S+ +                       L G +I +Q+GT   
Sbjct: 115 YAATPATFAVADTKILPKSAPNVAALRLENDARSNAPAVEDLRKALKGKTIGLQSGTIYT 174

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             + + FK         V++   E D      R DA   DI+   A +          ++
Sbjct: 175 AFVNNNFK---DVASIRVYKSAPERDLDLANGRIDASFDDITYYTANQGKTKVVPAGPVV 231

Query: 218 PDIISKSPLAPAIIQGDTEW 237
              I       A  + DT+ 
Sbjct: 232 AGPIWGPGEGLAFRKTDTDL 251


>gi|296116099|ref|ZP_06834718.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977356|gb|EFG84115.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 485

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 62/211 (29%), Gaps = 13/211 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGD----WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           G L    N  L     +K  G       G D+D  RAL+        +++   ++    F
Sbjct: 8   GVLNVCTNPTLPPMTFMKHAGGDTDMPSGVDIDLARALA---GYWHVRLEVSSMDFVGLF 64

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
            +L + +  +++        RE        P                I  +S LSG  I 
Sbjct: 65  PSLVAGRCGLVASGVTRLPSRER--SFDAVPYLDTALVVVAPAATPPIDRMSDLSGRRIA 122

Query: 150 VQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           VQAGT+    +          H        +   E +       R  A+      +Y  +
Sbjct: 123 VQAGTSYTAMVEHLNEQLVAQHRAPIEIQQYPTEENVVQQVLLGRDFAFISQDVEIYFRQ 182

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                    ++  D       A  + +   +
Sbjct: 183 KQLHGRVHIILRTDDTDYRQFALYMHKDAQD 213


>gi|270158535|ref|ZP_06187192.1| bacterial extracellular solute-binding family 3 protein [Legionella
           longbeachae D-4968]
 gi|289166633|ref|YP_003456771.1| arginine-binding periplasmic protein [Legionella longbeachae
           NSW150]
 gi|269990560|gb|EEZ96814.1| bacterial extracellular solute-binding family 3 protein [Legionella
           longbeachae D-4968]
 gi|288859806|emb|CBJ13787.1| putative arginine-binding periplasmic protein [Legionella
           longbeachae NSW150]
          Length = 241

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 26/195 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L    +F  S                +  G+   +  F+    +  + GF 
Sbjct: 3   MLKQIIFLALLSSNMFAYSA--------------TITVGVGKFVPPFSAADTSNHYFGFC 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL-LREISLGLAFR 119
           +D    L   +       +Y  + ++    +L    +D+       T    ++S    F 
Sbjct: 49  IDLINELCKRM---NDTCEYKSVMSEGIEASLTKGIVDV---TLTPTPISPDVSSEYIFS 102

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    FI +    I S+  L G  I +      E  L     ++    +   F ++
Sbjct: 103 MPYMTSSGQFITNNPD-IKSLKDLQGKRIGIIE----ESNLKTTLLSYTPIENVKEFSKL 157

Query: 180 EEIDAAYRAHRCDAY 194
            ++  A   +  DA 
Sbjct: 158 PDLIEALNNNDIDAI 172


>gi|115360319|ref|YP_777456.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115285647|gb|ABI91122.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 254

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 68/209 (32%), Gaps = 13/209 (6%)

Query: 38  CGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G     V F  +   +   +G  VD   A   A   D   ++           +L +K+
Sbjct: 33  VGSTATGVPFTFLDVKSNSIQGLLVDAITATGKAASFD---VKIEQTTFSSLIPSLTTKK 89

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGT 154
           IDI+S     T  RE    + F    Y  G+G I+        +S+  L G  +  Q GT
Sbjct: 90  IDIISAAMLKTPARE--QVVDFSDTVYSYGEGLIVRADDKRQYTSMDDLKGEIVGAQVGT 147

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-E 213
                L        +      ++ V +I       R  A  GD   +      N  P   
Sbjct: 148 AFVDALN----KKGIFKEVRTYDSVADIMRDVALGRIKAGFGDHPIIAYQLQHNPNPQLR 203

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            V       K  L   + +GDT     ++
Sbjct: 204 LVSGYQPSVKGQLCFVVRKGDTATLEQLN 232


>gi|291059707|gb|ADD72442.1| amino acid ABC transporter, periplasmic binding protein [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 298

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 69/254 (27%), Gaps = 33/254 (12%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++    L  G++           NG+  GFDVD  RA+   +     ++   P+  
Sbjct: 33  SLSRVRVAKTLVMGVSDRTPPMCFRYPNGEIVGFDVDLARAVCRVLG---VRLIIRPIKW 89

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKKGISSVS 141
             +  AL+   +D +      T  R     L          Q  ++              
Sbjct: 90  TLKRNALRCGLVDCVWTAFAVTARRRTEFLL--SEPYLRTAQVLLVREGRLHPDLAHVER 147

Query: 142 QLSGASICVQAGTTTELTL----------------------ADYFKAHNMKYHPIVFERV 179
           +L      V A  T    L                        +          + +   
Sbjct: 148 ELGQRMTGVSAVHTRGDILPMRSSHRQARIAVLRGGPVPGNEKWQFGFEPHGKVVWYRHR 207

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +  A R    DA   D+   +        P   + +P  +  S  A A  + D    +
Sbjct: 208 SAMLEALRTRAVDAALVDLVEAHDAVHRQGAPLRVMRVP--LGLSQYAVAFRREDRALRD 265

Query: 240 IVSWTHYAMVTAEE 253
            +    Y +  + E
Sbjct: 266 EIQRILYRIAASGE 279


>gi|15639300|ref|NP_218749.1| amino acid ABC transporter, periplasmic binding protein (hisJ)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189025542|ref|YP_001933314.1| amino acid ABC transporter, periplasmic binding protein [Treponema
           pallidum subsp. pallidum SS14]
 gi|3322585|gb|AAC65297.1| amino acid ABC transporter, periplasmic binding protein (hisJ)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189018117|gb|ACD70735.1| amino acid ABC transporter, periplasmic binding protein [Treponema
           pallidum subsp. pallidum SS14]
          Length = 321

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 69/254 (27%), Gaps = 33/254 (12%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++    L  G++           NG+  GFDVD  RA+   +     ++   P+  
Sbjct: 56  SLSRVRVAKTLVMGVSDRTPPMCFRYPNGEIVGFDVDLARAVCRVLG---VRLIIRPIKW 112

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKKGISSVS 141
             +  AL+   +D +      T  R     L          Q  ++              
Sbjct: 113 TLKRNALRCGLVDCVWTAFAVTARRRTEFLL--SEPYLRTAQVLLVREGRLHPDLAHVER 170

Query: 142 QLSGASICVQAGTTTELTL----------------------ADYFKAHNMKYHPIVFERV 179
           +L      V A  T    L                        +          + +   
Sbjct: 171 ELGQRMTGVSAVHTRGDILPMRSSHRQARIAVLRGGPVPGNEKWQFGFEPHGKVVWYRHR 230

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
             +  A R    DA   D+   +        P   + +P  +  S  A A  + D    +
Sbjct: 231 SAMLEALRTRAVDAALVDLVEAHDAVHRQGAPLRVMRVP--LGLSQYAVAFRREDRALRD 288

Query: 240 IVSWTHYAMVTAEE 253
            +    Y +  + E
Sbjct: 289 EIQRILYRIAASGE 302


>gi|46581019|ref|YP_011827.1| solute-binding family 1 protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450440|gb|AAS97087.1| bacterial extracellular solute-binding protein, family 3
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234703|gb|ADP87557.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 282

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 73/257 (28%), Gaps = 21/257 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +     L     +  +        R  ++ G       +A V  NG+  G   +  R
Sbjct: 21  MSLLFVTSALLPLLHTDQSESW-----RDTIRIGYAIE-PPYAFVNKNGNVTGESPELAR 74

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++       +  +++  +      AL + +ID+++     T  R   +   F   T   
Sbjct: 75  IVARRAGVRST--RFVLCDFNRLIDALVAGEIDVIASGMFITPKRIKRIA--FSQPTTTV 130

Query: 126 GQGFI-----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             G +      HK  G  +    SG  + V  G+  +  L     +       ++ +  +
Sbjct: 131 HPGLLVQRGNPHKIDGYGAFKAGSGVRVAVLNGSVEQGYL---LASGASSSAMVIVQTPQ 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           E   A   +   A       +  +  ++             +   +   A      DT  
Sbjct: 188 EALTALHDNAIQAIALSAPTVSFMVASSPSEFEAIAGFTPGEAPPEEHCAFGFRLDDTSL 247

Query: 238 YNIVSWTHYAMVTAEEL 254
                      +  +E 
Sbjct: 248 RQAFDAALAGYLGTQEH 264


>gi|325272491|ref|ZP_08138871.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
 gi|324102393|gb|EGB99859.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
          Length = 291

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 75/277 (27%), Gaps = 41/277 (14%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                +   ++L   +          I   G LK  +      ++    +G  +G DVD 
Sbjct: 2   RLMAVLFSALLLCCAAAQAQVRNYDTIIAAGELKVAVYKDFAPYSFQD-HGQPRGVDVDL 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR------------- 110
            +AL+ A+      I             L     D + R +     +             
Sbjct: 61  AQALAEAMGVRLKLI------WAPPGEKLDDDLRDYIWRGSPLRHQQLADLMLRVPYDHD 114

Query: 111 -----------EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTEL 158
                      E +  + F P      Q     ++   ++SV+      I V+  +    
Sbjct: 115 YAQRRNELGELENAQVVMFGPYQQERWQVAYDRRRLPSVASVAVFQQHPIGVEVDSVPSF 174

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS------ 212
            L   F    +      +  V++  AA +A   DA       +         P       
Sbjct: 175 YLTSVFN-GMLSAKTHHYPGVQQAFAAMQAGEVDAVMAMRGEVDWQLHEAANPQLALAEN 233

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +  L        +  A+ + + +    V      ++
Sbjct: 234 AYPNLGKQAWD--IGMAVHESNRQLAYAVEEALEVLI 268


>gi|257485079|ref|ZP_05639120.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|330987288|gb|EGH85391.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010994|gb|EGH91050.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 290

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 83/257 (32%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVVSFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +     ++      V+  +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG---NVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--------PLAPAIIQGDTEW 237
            +  R D      + + +L    + P     LP                A  + + D  +
Sbjct: 187 LQVGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDANGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EKAFNEQLAKLRASGEL 263


>gi|206563318|ref|YP_002234081.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198039358|emb|CAR55323.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 258

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 15/205 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVD 62
             F ++           + +A +   +     LK G     V F  +   +   +G  VD
Sbjct: 6   KRFGALAAGFATCIALSTASAGV---VAAEPTLKVGATATGVPFTFLDVKSNSIQGMMVD 62

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+++A      ++            +L +++IDI+S     T  R     + F    
Sbjct: 63  ---AITAAGKSAGFRVDVQQTVFSALIPSLTTQKIDIISAAMLKTPAR--QQVVDFSDTV 117

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y  G+G I+        +S+    G  +  Q GT     L        +      ++ + 
Sbjct: 118 YTFGEGLIVKADDPGRYTSMDDFKGQVVGAQVGTAFVDALN----KKGIFKEVRTYDSIA 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALK 205
           +I       R  A   D   +    
Sbjct: 174 DIMRDVALGRIKAGFADQPIVAYQI 198


>gi|120601685|ref|YP_966085.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
 gi|120561914|gb|ABM27658.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 282

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 73/257 (28%), Gaps = 21/257 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +     L     +  +        R  ++ G       +A V  NG+  G   +  R
Sbjct: 21  MSLLFVTSALLPLLHTDQSESW-----RDTIRIGYAIE-PPYAFVNKNGNVTGESPELAR 74

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            ++          +++  +      AL + +ID+++     T  R   +   F   T   
Sbjct: 75  IVARRAG--IRSTRFVLCDFNRLIDALVAGEIDVIASGMFITPKRIKRIA--FSQPTTTV 130

Query: 126 GQGFI-----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             G +      HK  G  + +  SG  + V  G+  +  L     +       ++ +  +
Sbjct: 131 HPGLLVQRGNPHKIDGYGAFTAGSGVRVAVLNGSVEQGYL---LASGASSSAMVIVQTPQ 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEW 237
           E   A   +   A       +  +  ++             +   +   A      DT  
Sbjct: 188 EALTALHDNAIQAIALSAPTVSFMVASSPSEFEAIAGFTPGEAPPEEHCAFGFRLDDTSL 247

Query: 238 YNIVSWTHYAMVTAEEL 254
                      +  +E 
Sbjct: 248 RQAFDAALAGYLGTQEH 264


>gi|308271710|emb|CBX28318.1| Membrane-bound lytic murein transglycosylase F [uncultured
           Desulfobacterium sp.]
          Length = 466

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 71/247 (28%), Gaps = 16/247 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           K  FV ++ +    +      +  S L  I K   +          +          GF+
Sbjct: 7   KYLFVVLVFITFCVYAVREKESEYSSLDTILKHKEITVITLNNAHCYYFY--KDQPMGFE 64

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  +A +  +         +    ++   AL+  +   ++ N      R+  +   F  
Sbjct: 65  YELAKAYAEYLGVKLKVQ--VVEKPEDLIPALKKNKYAFIAANIKIASKRKKEVA--FSD 120

Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                 Q  I+ K     I +   L G  + V+ G+T E  L    K   +    +  + 
Sbjct: 121 SYMNVRQCIIVRKNNASHIQNKKDLEGQIVHVRKGSTYEDQLKK-LKEQGINLKIVSCKN 179

Query: 179 --VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              EE+       +        +     +       +  I   I    PL  A+      
Sbjct: 180 SYDEELIEKVAQKKIKITIAYSNIANLNRRYYP---QINIAGAISDYEPLGWAVESNSKS 236

Query: 237 WYNIVSW 243
               ++ 
Sbjct: 237 LLLSINN 243


>gi|78212702|ref|YP_381481.1| extracellular solute-binding protein [Synechococcus sp. CC9605]
 gi|78197161|gb|ABB34926.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           CC9605]
          Length = 283

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 20/226 (8%)

Query: 1   MYKDFF---VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINT-GLVGFAEVKAN- 53
           M K F    VS  C  +L  +    NA    +  I+ RG+LK G+          ++ N 
Sbjct: 1   MVKSFLRLIVSFACASLLLLSPLEANAANDFVDAIQGRGYLKVGLPPYNTPPAYYLEENS 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            + +G+DVDF + L+S +  D    +    +       + +   DI       T  R   
Sbjct: 61  DELQGYDVDFAKTLASKLGVDIQFDR-SSTSFNNLVERVGNGDFDIAIGKLGLTYNR--- 116

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-------ELTLADYFKA 166
           L  AF          F+ +++   S                +T         T     KA
Sbjct: 117 LFDAFPIQYLSFRHAFLANREFVASLGVDPDDPRFGEILKNSTVRIGSIKNSTWETEAKA 176

Query: 167 HNMKYHPIVFERVEEIDAAYRAHR--CDAYTGDISALYALKLTNDR 210
           +      + ++       A        DA   D + +  +  +   
Sbjct: 177 NFPNATFVGYKNWPAAKKALFQEDSVIDAIYRDTTEIKPIVYSQPD 222


>gi|261754302|ref|ZP_05998011.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|261744055|gb|EEY31981.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
          Length = 275

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 44  LRFITTVDFPPFNRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 102

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V AG
Sbjct: 103 QADAIVAG--WEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAG 160

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +    
Sbjct: 161 TAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSAC 216

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 217 CTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 258


>gi|260567084|ref|ZP_05837554.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           suis bv. 4 str. 40]
 gi|260156602|gb|EEW91682.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           suis bv. 4 str. 40]
          Length = 269

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  +AL   +       Q   +   E    +   
Sbjct: 38  LRFITTVDFPPFNRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAVPWAELEERVLDG 96

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V AG
Sbjct: 97  QADAIVAG--WEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAG 154

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + +  A +  + D    D  +L A   + +    
Sbjct: 155 TAHEALLKNYFPQAK----PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSAC 210

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 211 CTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 252


>gi|150398296|ref|YP_001328763.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150029811|gb|ABR61928.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 269

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 63/221 (28%), Gaps = 14/221 (6%)

Query: 34  GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
             +             V    G   G++ D    ++  +     K++Y   +      A+
Sbjct: 36  KTVVVVTENAYPPLQFVDPKSGQAIGWEYDAMNEIAKRL---NFKVEYQNTSWDAMIQAV 92

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASI 148
              Q       T  T+  +    + F        Q  ++     +     S + L    I
Sbjct: 93  SDGQYQ--IGMTGITIKDDRKEKVDFSDPYLRSEQFMLVRGDETRFSDAKSFAALESGLI 150

Query: 149 CVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             Q GT+     + +    +       +FE       A +A   D    D  A      +
Sbjct: 151 GAQPGTSPFYTAVYEILDGNEQNPRIKLFETFGATVQALKAGDVDLVLTDSVAAKGYVDS 210

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           ++   +  ++   +          +G +E    V+    A+
Sbjct: 211 SE--GQLKVVGGPLGTEDFGFIFPKG-SELVAPVNAAIKAL 248


>gi|88604010|ref|YP_504188.1| extracellular solute-binding protein [Methanospirillum hungatei
           JF-1]
 gi|88189472|gb|ABD42469.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 225

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 62/199 (31%), Gaps = 16/199 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   V +  L I+         +    +     L+                G+  GF VD
Sbjct: 15  RWALVLLALLCIMAVCCSPALGARDVRVPLT-ELR--------PSLFTDEQGNPAGFFVD 65

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L+     +   + ++     E +  L    +D++      T+  E  +   F   +
Sbjct: 66  LIEDLAKK---EGWSVIWVSGTLSESWDRLSRGDVDLMPA---VTVTPERLILYDFTNES 119

Query: 123 Y-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                         GI+++  L G  + +  G ++ + L DY +   +    +  +   +
Sbjct: 120 VLSIWSQVYARPDSGINTILDLEGKRVAMVRGASSGVGLRDYAEKFGVTAIYLEKDTATD 179

Query: 182 IDAAYRAHRCDAYTGDISA 200
           I  A      DA     SA
Sbjct: 180 IFTAVSEGEADALVMFNSA 198


>gi|320457998|dbj|BAJ68619.1| ABC transporter substrate binding component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 281

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 78/238 (32%), Gaps = 15/238 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G+            +G ++GFD+   + +++ +     +I +  +  + R   L +
Sbjct: 36  TIAIGVAADEPSVGAW-HDGTYQGFDITIAKYVAAKLGYANKQIVFKQVRPENRRSMLDN 94

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASI 148
            Q+D++  +   T     S  + F         G ++             SV  +   ++
Sbjct: 95  GQVDMVVASWPITDG--SSAIVDFAGPYLTTSVGLLVRSDERGRFTNDAGSVGDVGDGTV 152

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           C   G  T       F+ ++ +          +   A +    DA   D++ L  L    
Sbjct: 153 CAVKGDETVGI----FRGNHPQARIQERSSYAQCVTAVQVGSADAIASDMAVLSGL--QA 206

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               +++ +     +     A+ QG ++    ++     MV        +      +K
Sbjct: 207 ANGPQYMDVIADKGEVSYGIAVSQGISQLAQKIAEALEDMVEDGSWTAAKDTFTSQTK 264


>gi|328948378|ref|YP_004365715.1| ABC transporter periplasmic protein family 3 [Treponema
           succinifaciens DSM 2489]
 gi|328448702|gb|AEB14418.1| ABC-type transporter, periplasmic subunit family 3 [Treponema
           succinifaciens DSM 2489]
          Length = 257

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 6/106 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +      +K G N     F  V+      GFD+   + ++  +      ++ + ++   
Sbjct: 158 DEALSGKVVKLGTNAAFPPFEYVEGT-KIVGFDITMGQKIAKDLG---QSLEVVDMSFDS 213

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
              AL S  ID ++     T  R+    + F    +   Q  I+ K
Sbjct: 214 LIPALSSGAIDFIAAGMSVTEERKK--NVDFSEPYFTSNQVIIVRK 257


>gi|256111405|ref|ZP_05452425.1| extracellular solute-binding protein family 3 [Brucella
          melitensis bv. 3 str. Ether]
 gi|265992907|ref|ZP_06105464.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
          Ether]
 gi|262763777|gb|EEZ09809.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
          Ether]
          Length = 77

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 26/77 (33%)

Query: 1  MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
          M     ++   +I     + +     L  IK  G LK G       F     +    GFD
Sbjct: 1  MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60

Query: 61 VDFCRALSSAIFDDPSK 77
          V+   A++  +   P  
Sbjct: 61 VEIGEAIAGKLGVKPEF 77


>gi|118589324|ref|ZP_01546730.1| ABC transporter, periplasmic amino acid-binding protein [Stappia
           aggregata IAM 12614]
 gi|118438024|gb|EAV44659.1| ABC transporter, periplasmic amino acid-binding protein [Stappia
           aggregata IAM 12614]
          Length = 270

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 73/257 (28%), Gaps = 28/257 (10%)

Query: 8   SILCLIILFFTSFSTNASIL--------GDIKKR-----GFLKCGINTGLVGFAEVKANG 54
             L    L   S S     +          +  R       ++     G   F     +G
Sbjct: 1   MALGAATLGPLSASAQEPSVRVPNFWDPKAVHDRPSTIPDKIQFLATDGYPPFVFRDQHG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF+VD  RAL   +    S       + +    AL  ++ D +      +L    + 
Sbjct: 61  RLTGFNVDLARALCQELG---SSCALRIKDFEVLLPALDEEEGDAIISGLSRSL--PSTR 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            L F          F++          Q L+G  I V+AG+  E     +F         
Sbjct: 116 RLNFTEDYLKLPARFVVRAYNAADFNEQALTGKRIAVEAGSRFEAFAKRFFPEA----EI 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDIISKSPLAP 228
           +  E  E    A +    DA  GD   L     +              L        +A 
Sbjct: 172 VSLETAEATRDAVKGGSADALFGDGLNLSFWLPSEAADDCCAFAGGPWLEPGYFDEGMAI 231

Query: 229 AIIQGDTEWYNIVSWTH 245
           A  Q D E    +++  
Sbjct: 232 ATRQDDPERAAALTYAL 248


>gi|194016525|ref|ZP_03055139.1| L-cystine-binding protein TcyK [Bacillus pumilus ATCC 7061]
 gi|194011998|gb|EDW21566.1| L-cystine-binding protein TcyK [Bacillus pumilus ATCC 7061]
          Length = 280

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 67/222 (30%), Gaps = 10/222 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--FDDPSKIQYLPLNAKERF 89
               +  G       F  +  NG   G++    +A+   +       + +Y     K   
Sbjct: 45  DAKEIIVGTGNAYQPFVYLDENGKLTGYE----KAVLDEVDQLLPQYQFKYESFEFKNIL 100

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASI 148
            AL + ++D+ +   +    R+          T +     +         S+  L+G  +
Sbjct: 101 PALDAGKVDLAAHQYEINDERQKKYLFGKVGYTDYTSYVVVDKASGHDFQSLDDLAGHKV 160

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI-DAAYRAHRCDAYTGDISALYALKLT 207
               G+     L  Y + H+ K   +  +   EI     +    DA       +  L   
Sbjct: 161 HTSTGSNFAYLLEQYNEKHDRKIDIVYGDGGNEILVKNLQNGTVDAALLTKYDVNKLNKQ 220

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +        P  +SK+       + +T+    +      ++
Sbjct: 221 FNANLVTSGKPVNVSKTYY--LYQKNNTKLQKDIDQALQKLI 260


>gi|104779686|ref|YP_606184.1| sensory box protein [Pseudomonas entomophila L48]
 gi|95108673|emb|CAK13367.1| putative sensory box proten ; GGDEF domain/EAL domain protein
           [Pseudomonas entomophila L48]
          Length = 1247

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 69/224 (30%), Gaps = 11/224 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G++     F      G ++G   D+   +   +      I+  P +  E     +  
Sbjct: 38  LRLGVDASWPPFEFRDQEGRYQGLAADYIALIQDRLGIKLQPIE--PSSWTEVLAQARKG 95

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           +ID+L      T  R+  L   F           + HK      ++  L G  I V    
Sbjct: 96  RIDLLPGIMS-TPERQAYLA--FTRPYLDFPIVILAHKGGAQPRNLQDLYGLKIAVVENY 152

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L    + H+   + +    V     A      DA  GD+++             +
Sbjct: 153 APHELL----RTHHPDLNLVAMPNVSSTLQALATDAVDAVVGDLASSIWSLRQLKLDGLY 208

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           V          LA A  Q    +  I+      M ++E   I Q
Sbjct: 209 VSGETPYRYQ-LAMAAPQEQKIFIGILDKVMADMSSSEVSHIQQ 251


>gi|331698687|ref|YP_004334926.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953376|gb|AEA27073.1| ABC-type transporter, periplasmic subunit family 3 [Pseudonocardia
           dioxanivorans CB1190]
          Length = 367

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 16/188 (8%)

Query: 30  IKKRGFLKCG---INTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           +   G L  G   + TG      V  +     G + D  R +++ +  +P   +      
Sbjct: 105 VPDSGTLVIGSGSLPTGSPPLGFVGTDQKTLTGSEPDLGRLVAAVLGLEP---RIDNATW 161

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS---SVSQ 142
              F+ + S + D+   N   T  R+      F      D  GF        +   + + 
Sbjct: 162 ANLFVGIDSGRTDVGFSNITDTEQRKE--KYDFA-CYRQDNLGFETLASSPWNFDGTAAS 218

Query: 143 LSGASICVQAGTTTELTLADYFKA---HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           L+G ++ V  GT  E  L  +               F  +     A  + + DAY     
Sbjct: 219 LAGRTVSVGKGTNQEKILLQWQSELQTQGKTLDVKYFPDINSTYLALSSGKIDAYFLPNP 278

Query: 200 ALYALKLT 207
           ++      
Sbjct: 279 SVAYHVTQ 286


>gi|226308011|ref|YP_002767971.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis
           PR4]
 gi|226187128|dbj|BAH35232.1| putative ABC transporter substrate-binding protein [Rhodococcus
           erythropolis PR4]
          Length = 324

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 14/186 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
               + + L D    G L    +      +       + KG +    RA+   +  +  +
Sbjct: 76  CGPQSGTTLED----GVLTIATDSPAYAPWFVDNDPSNGKGLEGAVARAVVDKLGYNTDQ 131

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KK 134
           +++  +       AL+    D       +T+  +    + F    Y   Q  I     K 
Sbjct: 132 VRFTTVAFN---DALKPGPKDFDFDVNQFTISGDRRANVDFSSPYYAVAQSVIASRGSKA 188

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            G  +++ L+G  +  Q G+T+   + D          P  F   ++  AA  A + DA 
Sbjct: 189 AGAKNLADLAGYRLGAQTGSTSLAAITDTIV---PTTAPREFATTDDAKAALAAGKIDAL 245

Query: 195 TGDISA 200
             DI  
Sbjct: 246 VVDIPT 251


>gi|330897812|gb|EGH29231.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 290

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 86/254 (33%), Gaps = 16/254 (6%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVISFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           +       + S+  ++G +    A       + +   +     + ++F++  E  AA +A
Sbjct: 130 VKTGNPLNLHSLKDVAGNTKVRLATQPGSNQVQEAKDSGIANSNVVLFDKDTEALAALQA 189

Query: 189 HRCDAYTGDISALYALKLTN-----DRPSEHVILPDIISK---SPLAPAIIQGDTEWYNI 240
            R D      + + +L         +R      +PD   K   +  A  + + D  +   
Sbjct: 190 GRVDVVYFPDAEVISLIKKANSADIERALPFEQIPDASGKPGWNYHAYGLPKNDPAFEQA 249

Query: 241 VSWTHYAMVTAEEL 254
            +     +  + EL
Sbjct: 250 FNEQLAKLRASGEL 263


>gi|307822896|ref|ZP_07653126.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Methylobacter tundripaludum SV96]
 gi|307735671|gb|EFO06518.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Methylobacter tundripaludum SV96]
          Length = 1171

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 11/224 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ GI+     +  + ANG++ G   D+   +   +      ++    +  E     Q 
Sbjct: 339 VIRVGIDRDFAPYEWIDANGNYVGLSADYIALIEQRLGVKLDIVKDK--SWAEMLEMAQR 396

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
            ++D++  N + T  RE    L F           I       I ++  L+G  + ++ G
Sbjct: 397 GELDMI-ANANKTPERERY--LFFTEAYLNTPAIIINDSNNGFIGTLDHLNGKQVTLERG 453

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
              +  L             +  E + +      + + DAY GD ++ +   +  +    
Sbjct: 454 YFMQELLMHDHPE----IQLVPAENIHDALNLVSSGKADAYIGDAASTH-YAIKREGMLN 508

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                D   KS    A  + + E  ++++     +  AE+  I 
Sbjct: 509 LGFSGDTTYKSYHRMAATRLNPELASLLAKALADIPQAEKDAIQ 552


>gi|229814978|ref|ZP_04445316.1| hypothetical protein COLINT_02021 [Collinsella intestinalis DSM
           13280]
 gi|229809465|gb|EEP45229.1| hypothetical protein COLINT_02021 [Collinsella intestinalis DSM
           13280]
          Length = 293

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 85/266 (31%), Gaps = 29/266 (10%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV------------KANGDWK-GFDVDFC 64
              S + ++LGD K    L+ G+      +                  G +  G+DV   
Sbjct: 40  GGASASGTLLGDGK---TLRVGMEAAYAPYNWQVSEESEFTIPIENVPGAYADGYDVQVA 96

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           + ++  +  +P  ++   L       AL + Q+DI+      T  R      AF      
Sbjct: 97  KIIADGLGMEPVAVK---LEFGSLIDALNNGQVDIVCAGMSVTPERAA--AAAFSDSYVD 151

Query: 125 DGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           D    I          ++  +L+ ASI  QA T  +  +A    A++M       E    
Sbjct: 152 DDIVMICRADSAYAGATTFDELADASILGQAATMYDDVIAQIEGANHMT----PAETQPM 207

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNI 240
           +    R   CD  T  + +   L           +         P    + +G+    + 
Sbjct: 208 VVENLRNGTCDIITYSMLSAPKLLEVYPDLVVLDMEDAFEDSLMPDNAGVAKGNDAALDK 267

Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266
           V+    ++   E   +    +++   
Sbjct: 268 VNEIIASIDDEERQDMWSACMDRQPA 293


>gi|167769531|ref|ZP_02441584.1| hypothetical protein ANACOL_00865 [Anaerotruncus colihominis DSM
           17241]
 gi|167668499|gb|EDS12629.1| hypothetical protein ANACOL_00865 [Anaerotruncus colihominis DSM
           17241]
          Length = 236

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 13/217 (5%)

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+DV   + ++  +     ++   P+  +    A+ + +ID +      T  R     + 
Sbjct: 30  GYDVVMGKYIAEQLG---LELLVKPIAWEGLEPAVNNGEIDAIIAGMTATPER--RENVD 84

Query: 118 FRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           F    Y      I+ K      I+S+  LSG  +  Q  T  +  +           H  
Sbjct: 85  FTDPYYESKMVVIVRKDSDLTNITSIQDLSGRKVQGQLNTLYDTVIDQIEG----VDHVT 140

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                  +  A ++   DA T ++     +  +N     +V   +           I   
Sbjct: 141 PLATYPLMVVALQSGEVDALTAELPVAAGVVASNPD-LTYVEFAEGSGFEADTSVSIAVK 199

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
                ++     A+ +  E    Q  I+  S+     
Sbjct: 200 KGNTALLDAIQGALASVSEEDRQQWMIDATSRQPAQE 236


>gi|260562862|ref|ZP_05833348.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           melitensis bv. 1 str. 16M]
 gi|260152878|gb|EEW87970.1| bacterial extracellular solute-binding protein, family 3 [Brucella
           melitensis bv. 1 str. 16M]
          Length = 101

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  V  +G   
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFV-KDGKIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           GF  D    ++        +++ L L  +     L + + D ++
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVA 100


>gi|288935769|ref|YP_003439828.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|290509796|ref|ZP_06549167.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           sp. 1_1_55]
 gi|288890478|gb|ADC58796.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|289779190|gb|EFD87187.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           sp. 1_1_55]
          Length = 276

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 66/232 (28%), Gaps = 15/232 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           ++ G +  G +     +  +  N    GFD++    L+  +  +   I            
Sbjct: 29  QQSGKITAGSDMTFFPYEYM-ENNKPAGFDIELLDGLAKTMGREAVNID---TRFPNLIP 84

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASI 148
            LQ  + DI + +   T  R   + +         G+  +  K       +     G  I
Sbjct: 85  GLQGGRFDITNSSMYITAERLKVIDM---VPYLKSGEAILARKGGDYQPKTPEDFCGHKI 141

Query: 149 CVQAGTTTELTL----ADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALYA 203
                T+    L    ADY     +K   +  +    +   A  +   DA   D +    
Sbjct: 142 GSMGATSWLAQLQKLSADYCVKKGLKPIALSVYTTDPQTTQALLSRAVDAQITDAAVARG 201

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +          +    +I        + +G+TE    +           E  
Sbjct: 202 VVEKLGD-RVVISSDTLIYPVLNGFGVKKGNTEVKTALEEALKKYSATPEYA 252


>gi|254993302|ref|ZP_05275492.1| hypothetical protein LmonocytoFSL_09997 [Listeria monocytogenes FSL
           J2-064]
          Length = 180

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 49/139 (35%), Gaps = 2/139 (1%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G  T       +  NG   G+DV+  + +   +       ++  ++     ++L +
Sbjct: 36  TITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKF--KFKTMDFSNLLVSLGA 93

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            ++DI++   + +  RE            F  Q  ++     I+S   L+G  +   A +
Sbjct: 94  GKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATS 153

Query: 155 TTELTLADYFKAHNMKYHP 173
              L L    +     +  
Sbjct: 154 NGALVLKKINEEQGNNFEI 172


>gi|282865052|ref|ZP_06274105.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces sp. ACTE]
 gi|282559975|gb|EFB65524.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces sp. ACTE]
          Length = 300

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 82/262 (31%), Gaps = 19/262 (7%)

Query: 8   SILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
            ++   +L   S +   S      L  ++K+GF++         +  ++   + KG    
Sbjct: 22  LLVVPGLLSACSKTDAGSTDGEGALDKLRKQGFVRVAY-ANEAPYGYMEGK-ELKGEAPT 79

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R +  A+  D  +              LQ+ + D++S     T  R       F    
Sbjct: 80  LHREIFKALGVDELRPTLS--EWDGLIPGLQAGKYDVVSAGMAITPER--CANALFSDPE 135

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVE 180
           +      ++ K      ++ L+ A             + D +              ++ +
Sbjct: 136 FISPTAMMVKKGNP-KKITDLASAKAVGAVIGVMSGAVEDSYAKGAGISGNKIKTLQKPQ 194

Query: 181 EIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDII---SKSPLAPAIIQGDTE 236
           +   A +  R DA+    IS  +  +   D       +P++      SP      +G+ +
Sbjct: 195 DGADAVKGGRVDAFLLTGISLRWLARTNPDTEVTEAFVPELEGAKQFSPGGAVFRKGNED 254

Query: 237 WYNIVSWTHYAMVTAEELGITQ 258
             +  +      +TA+      
Sbjct: 255 LRDSFNRELK-KITADRSRYVG 275


>gi|254480244|ref|ZP_05093492.1| transporter, DAACS family [marine gamma proteobacterium HTCC2148]
 gi|214039806|gb|EEB80465.1| transporter, DAACS family [marine gamma proteobacterium HTCC2148]
          Length = 720

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 72/239 (30%), Gaps = 14/239 (5%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            +      + L  + + G L+ G     +  + +   GD  GFDV+    L+  +  +  
Sbjct: 459 ASVTQLAGTRLDHVLRTGVLQVGYRPNNLPCSFITPKGDLVGFDVEMAHILAEDLEVELE 518

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            I +           L S QIDI         L +     +F          FI    + 
Sbjct: 519 FIPF---EFDGLKRMLSSGQIDIAMSC--IASLPDRYSIASFSRPYLDLALAFITKDHQR 573

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR---CDA 193
                 L+  S+      T  L  + Y+++   +  P       E    +        DA
Sbjct: 574 ---ELFLNPDSLRAWDDLTIALVSSKYYQSRLQQLVPDANLVYLEAAEDFFNGNGQGADA 630

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                    A       P   V+        P A  + +GD E    VS    A+  +E
Sbjct: 631 LLLTEEEGAAYAYRY--PQYGVVTTARRIGLPAAYPVPKGDIEMMEFVSN-WIALKQSE 686


>gi|239908597|ref|YP_002955339.1| putative sensor histidine kinase [Desulfovibrio magneticus RS-1]
 gi|239798464|dbj|BAH77453.1| putative sensor histidine kinase [Desulfovibrio magneticus RS-1]
          Length = 571

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 74/237 (31%), Gaps = 14/237 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           + +RG +   ++     F  + A G   G   D    ++         +++  +      
Sbjct: 69  VAERGVVTLCVDPDWPPFETIDAAGRHVGIAADLLGLVAERTG-----LRFTLVPTASWD 123

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI 148
            +L++ +       +      +    LAF      D   FI  ++   I+   +L+G +I
Sbjct: 124 ESLEAARQGRCRALSFLNRTPQREQWLAFTRPLLSDVNVFITREEHAFIADPGRLAGETI 183

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
              +GT  E  +   +       H +     +E  A     + D     +          
Sbjct: 184 VFPSGTAMEELIRRDYP----NLHILTTASEDEAMAMVSDRQADMTMRSLIVAAYTIKKR 239

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE----ELGITQKNI 261
              +  +        + L   ++  D    +I++     + TAE    E      N+
Sbjct: 240 GLFNLKIAGQLPYYSNNLGLGVVGDDRTLIDILNKGIDTITTAERAAIENRHVSINV 296


>gi|270261785|ref|ZP_06190058.1| extracellular solute-binding protein [Serratia odorifera 4Rx13]
 gi|270045269|gb|EFA18360.1| extracellular solute-binding protein [Serratia odorifera 4Rx13]
          Length = 304

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 71/237 (29%), Gaps = 17/237 (7%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81
           + S+   +KK GF+  G N         +A+     G ++D   A++  +      I + 
Sbjct: 47  HDSLPDAVKKAGFIVAGTNPNTPPTTFYEADNKTLAGREIDVMSAIADRLG---VAIHWK 103

Query: 82  PL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGI 137
                      L+S + D+   N D    R     + F           I  K       
Sbjct: 104 DTGGFDNIIPGLKSGRYDVALANIDANKKR--FQQVDFVGYYNASKLALIARKDAALGPY 161

Query: 138 SSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           + ++QL G ++   AGT+    L         A        +F        A  + R   
Sbjct: 162 TELAQLCGQTVGAGAGTSQVTRLQQASDQCVSAGKPAITIPIFPDRPAGVQATISGRVPM 221

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           + G       L+          +  DI  +       +   +E    V     +++ 
Sbjct: 222 FFGP---YEGLRYQASHVKALALAGDINIEGTTVAIALPKGSELVKPVQAALNSLIA 275


>gi|294788733|ref|ZP_06753974.1| putative extracellular solute-binding protein, family 3
           [Simonsiella muelleri ATCC 29453]
 gi|294483215|gb|EFG30901.1| putative extracellular solute-binding protein, family 3
           [Simonsiella muelleri ATCC 29453]
          Length = 282

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 6/217 (2%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +       +  F     NG+  GF+ D   A+++   +   ++Q +P + ++ +  +   
Sbjct: 58  IHVLTTGSVSPFNFRDENGNVIGFEPDLIEAIAA---NQGMRVQIIPKSWEQVWATIDKN 114

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
             +         +  E                   + K   I +V   +G  I V  G+T
Sbjct: 115 PNEPTLAMNTIGITEERQKKYLLSESYVRAPNALAVLKDSPIQTVRDANGKKISVMQGST 174

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
             + L +    +      +    +     A   H  D   GD   +       + P   +
Sbjct: 175 --IILDEIKAQNIKPAQLVNRNSLYLTLGAITNHSADVAWGDKLVMAYYAKNMNVPIRFI 232

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            LP+      +   + + DTE  + ++    A + A+
Sbjct: 233 DLPNDGVDDRVVFILNKKDTELLDKINRGL-ANLKAD 268


>gi|222147458|ref|YP_002548415.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221734448|gb|ACM35411.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 306

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 65/219 (29%), Gaps = 18/219 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F+ +   G   G+++D  R +   +  +  K +   +   +  +AL SK
Sbjct: 75  LRFLTTVDFPPFSFLDQTGHLTGYNIDLVREICRELDVEA-KCEVQAVPFSDMEIALLSK 133

Query: 96  QIDILSRNTDWTL--LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQ 151
             D        T    R+     AF          F++ +       + + L+G  + + 
Sbjct: 134 HGDAAVAGMAVTAGLRRD----FAFSRPYLMLPARFVVPRDNLGKADTPAALAGKPVGIV 189

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT  E  L  +F A      P+ F     +  A +  +  A   D   L     +    
Sbjct: 190 TGTAQEAMLKAFFPA----ITPVGFADQAALMDALKQKKIQAAFADGLQLSFWLASASSA 245

Query: 212 SE-----HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                     L        +   + + D        +  
Sbjct: 246 QCCAFLGGPFLSQQFLGEGMTIMVRKEDGFLAAAFDYAL 284


>gi|291459982|ref|ZP_06599372.1| putative amino-acid ABC transporter-binding protein PatH
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417323|gb|EFE91042.1| putative amino-acid ABC transporter-binding protein PatH
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 282

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 79/253 (31%), Gaps = 27/253 (10%)

Query: 1   MYKDFFVSILCLIILFF----TSFSTNA--------SILGDI------KKRGFLKCGINT 42
           M K +    + L  +      T  S N+        S    +      + +  +K     
Sbjct: 2   MKKKWIAGSIVLASILMIMWITGCSGNSTSKESGSQSTEQTVSTDTSGEAKEVIKISTTG 61

Query: 43  GLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
               F+E     G+ +G+++D    ++        +IQ+           L++ ++D ++
Sbjct: 62  NHTFFSETNEKTGELQGYEIDVWNEIAKR---KNWEIQWELAGFPGILELLEAGRVDTVA 118

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
                T  R+     +         +  +      I  +  + G  + V           
Sbjct: 119 DQIGVTDERKKVYNFSEVYFY-VPYRVVVAEDNDTIHGIKDVYGKKMGVLVNDIA-YAFK 176

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
           D F   N K   + +E+   +       R DA    +S+++   +      +   + D++
Sbjct: 177 DQFDPDN-KIQYVEYEKSTAVHTDVALGRTDA--SLMSSMHIEDVKKKSGLKIKGVGDVV 233

Query: 222 SKSPLAPAIIQGD 234
                A    + +
Sbjct: 234 YTEDAAYPFHKDE 246


>gi|150377556|ref|YP_001314151.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150032103|gb|ABR64218.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 281

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 18/220 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M+K      +   +L   + +      + ++  + K+ G  K  +           A+G 
Sbjct: 1   MFKSILAGCVLSAVLAMPALAEVIPALHDALPQEYKENGV-KAAVFNDWAPDEFQDADGQ 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            KG+ VD  + +   +        +   +       LQSK+ D    +   T  R  +  
Sbjct: 60  LKGWSVDIAKEMEERLG---VPFTFEGTSFDAIIPGLQSKRFDAGFSSFGTTAERLKT-- 114

Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           L F       G  F         I + +   G ++ V    + +L L +    +  K +P
Sbjct: 115 LDFVSQ-RKIGTSFAYPADSKLDIKTAADACGLTVAV-LNGSWDLGLLEKLNDNECKDNP 172

Query: 174 IVFERV---EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +  +      + + A R+ R  A       L  +      
Sbjct: 173 VTMQTHGTQAQAELAVRSQRAQATVAGSVKLAYMAKQTGD 212


>gi|16330004|ref|NP_440732.1| hypothetical protein slr2077 [Synechocystis sp. PCC 6803]
 gi|1652490|dbj|BAA17412.1| slr2077 [Synechocystis sp. PCC 6803]
          Length = 732

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 6/159 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G+         +       GF +D   A+++A   +  +I+Y     +     L++
Sbjct: 29  VVRIGVYENQPKI-FLNDQNRPVGFWIDVIEAIAAA---ENWQIEYHLCEWQACLQKLEA 84

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID L  +      R          +               I+S+  L G  I V   +
Sbjct: 85  GKID-LMPDVAVNPERAKKFQFNQEVV-LNSWSIIYAANNANINSIIDLEGKRIVVLKNS 142

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             E  L        +K   I  +   E+     A   DA
Sbjct: 143 VQEKNLIKRLAELKIKAEIIQVDSFSELFKKIDAGEADA 181


>gi|312959584|ref|ZP_07774101.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
 gi|311286301|gb|EFQ64865.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas fluorescens WH6]
          Length = 214

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     + +L  +     +     S L ++ +RG L          +  ++A+G ++G D
Sbjct: 43  MKAPLALCVLATLATSALADPAP-SRLDEVLQRGTLSVCTTGDYKPYTSLRADGSYEGID 101

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +    +L+ ++    +KI ++P   K       +++ DI       +L R+ 
Sbjct: 102 IAMAESLAKSL---NAKITWVPTTWKTLMPDFLAQRCDIAVGGISVSLERQK 150


>gi|15674033|ref|NP_268208.1| amino acid ABC transporter substrate binding protein [Lactococcus
           lactis subsp. lactis Il1403]
 gi|281492708|ref|YP_003354688.1| amino acid ABC transporter substrate-binding protein [Lactococcus
           lactis subsp. lactis KF147]
 gi|12725102|gb|AAK06149.1|AE006435_7 amino acid ABC transporter substrate binding protein [Lactococcus
           lactis subsp. lactis Il1403]
 gi|281376365|gb|ADA65855.1| Amino acid ABC transporter, substrate-binding protein [Lactococcus
           lactis subsp. lactis KF147]
          Length = 280

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 17/208 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-------GDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K   +++  + I      +  +S           +     +    +   V +     N
Sbjct: 1   MKKIKLLTLATVGIASIGLLAACSSKDNSSSKSTDKVT---TVTVATSAASVPYEYS-EN 56

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G   GF+ D  +A    + D      +          AL   +  I + N   T  R  S
Sbjct: 57  GKMTGFEYDILKAADKDMKDYKF--DFKVYEDSAILAALDGGRAQIAANNFGKTKAR--S 112

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
               F               K+ I+ +SQL+G +  + AGT        + K H  K   
Sbjct: 113 EKYLFSYPVRQGIDAIFSTSKENITKISQLAGKTTEIPAGTNYGDMFESWNKNHPDKKIN 172

Query: 174 IVFERVEEI--DAAYRAHRCDAYTGDIS 199
           + + +       +A  + + D      +
Sbjct: 173 VKYSQRPLADRLSAISSGQIDFLFASKA 200


>gi|120401319|ref|YP_951148.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119954137|gb|ABM11142.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 302

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 14/227 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             L   IN    G+  +      +++GFD+D   AL + +        YL +   E    
Sbjct: 57  KTLTNAINPYTPGYETINPENPSEYQGFDIDLGNALGACLGFKND---YLSVGFSELIPT 113

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASIC 149
           + S Q D +  N   T  R  + G+ F   +       +        +     L G ++ 
Sbjct: 114 VASGQADWIISNLYATEER-AAGGVDFISYSKVFDGILVAKDNPKNITGIDTSLCGLTVA 172

Query: 150 VQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           +  G      +     +            +F+   +   A  A R DAY  D        
Sbjct: 173 LNKGYVEVPLVEAVGPECVATGLKAPTVSLFDSSADCTQAVLAGRADAYMND--INTVNA 230

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              + P E      ++    +   + QGD ++ + +      +  + 
Sbjct: 231 FVAEHPDELASAETVMLDYTIGIGVPQGDHQFRDAIQAALTEVQASG 277


>gi|160915868|ref|ZP_02078076.1| hypothetical protein EUBDOL_01890 [Eubacterium dolichum DSM 3991]
 gi|158432344|gb|EDP10633.1| hypothetical protein EUBDOL_01890 [Eubacterium dolichum DSM 3991]
          Length = 277

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 90/287 (31%), Gaps = 29/287 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----------- 49
           M K   V +  +  +  T+       +     +  L   ++     ++            
Sbjct: 1   MKK--LVMVFMVGAMLLTACGKEEPKVDQNTGKQQLVVAMDMNSAPYSYESATQSDDTVA 58

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
              +G  KG+DV   R L++ +  +   +    ++ KE   AL   ++D++         
Sbjct: 59  YGKSGYAKGYDVWLARDLAADLKRE---LVIKKMDTKEFATALDEDRVDLVMGALFDNSE 115

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG---TTTELTLADYFKA 166
            +    L +  + +  G   +  K    SS S+LS       A    T  +  +      
Sbjct: 116 ED---DLVYSDVYFESGICLLTRKDDKSSSYSKLSQFKKAKVASLGGTFFDSAIEQIKGV 172

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            +        +   ++ A  +A + DA+  +      +   N   +     P    +S  
Sbjct: 173 KHEDAR----DSYAQLIADLKAKKLDAFVAESKIAEQIVKQNSDLAIVSFAPKQGFQSGK 228

Query: 227 APAIIQGDTEWYNIVSWTH---YAMVTAEELGITQKNINQVSKDTTN 270
              I   D E    V+       A V +E +      +     + TN
Sbjct: 229 GVVIGSDDEELMEKVNRFIKKQKAEVRSENMQKASAVVPSFVPEETN 275


>gi|163740088|ref|ZP_02147491.1| periplasmic sensor signal transduction histidine kinase
           [Phaeobacter gallaeciensis BS107]
 gi|161386637|gb|EDQ11003.1| periplasmic sensor signal transduction histidine kinase
           [Phaeobacter gallaeciensis BS107]
          Length = 663

 Score = 74.0 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 76/251 (30%), Gaps = 23/251 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++   + IL +      + +T             ++         ++   + G  +G  
Sbjct: 1   MFRQLLLVILLVTGPAVATMATAEP----------IRM-TYEEFHPYSFTDSTGQPQGVS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +D  R ++ A      ++ + P  N       L+S   D ++     T  R         
Sbjct: 50  IDIMRLIADAAG---QEVVFQPTQNPAGMLEELRSGAAD-VTSLLALTPERLA--AGLAT 103

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                      +     ++++  L+G ++ V  G+           A       + F+  
Sbjct: 104 EELGAFELRAFVRGHGSVANLGDLTGTTVGVVRGSFAVSGARLIPFAK-----LVEFDTT 158

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +++         DA     +       T +     V L   +  SP    +   +     
Sbjct: 159 DDLILPLLTGEIDAVVSAHNGFLRRLRTAEVEDRIVALEPPLVTSPYGFVVAAENEPLRT 218

Query: 240 IVSWTHYAMVT 250
           +++   Y+ V+
Sbjct: 219 VLNAAIYSSVS 229


>gi|116254280|ref|YP_770118.1| solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|241206763|ref|YP_002977859.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|115258928|emb|CAK10037.1| putative solute-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|240860653|gb|ACS58320.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 265

 Score = 74.0 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 62/221 (28%), Gaps = 14/221 (6%)

Query: 34  GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
             +             V    G   G++ D    ++  +     K++Y   +      A+
Sbjct: 32  KSVVVVTENAYPPLQFVDPKSGKAIGWEYDAMNEIAKRL---NFKVEYQNTSWDAMIQAV 88

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASI 148
              Q +     T  T+  +    + F        Q  +      +     S  +     +
Sbjct: 89  SDGQYN--IGMTGITIKEDRKQKVDFSDPYMRSQQFMLVRGDEKRFTDAKSFGEFKDGLV 146

Query: 149 CVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             Q GTT     + +    +       +FE       A +A   D    D +A       
Sbjct: 147 GAQPGTTPFYTAVYEVLDGNEQNPRIKLFETFGATVQALKAGDVDVVLTDGTAGKGYVDA 206

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           ++      ++ + +          +G ++    V+    A+
Sbjct: 207 SN--GALKLIGEPLGTEDFGFIFPKG-SDLVAPVNAAIAAL 244


>gi|294787866|ref|ZP_06753110.1| glutamine-binding protein / Glutamine transport system permease
           protein [Simonsiella muelleri ATCC 29453]
 gi|294484159|gb|EFG31842.1| glutamine-binding protein / Glutamine transport system permease
           protein [Simonsiella muelleri ATCC 29453]
          Length = 268

 Score = 74.0 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 57/210 (27%), Gaps = 13/210 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
             +         F +    G+  GFD+D    +      +  ++QY     +     L S
Sbjct: 33  VYRVATLAAFPPFVQRDGRGNPIGFDIDLLNEIGKE---EGFQLQYKMQLWQGILEELNS 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAG 153
            Q DI++     T  R+      F           ++  K        +    ++     
Sbjct: 90  NQHDIVAAGVVVTPERQKL--YDFSDNYMDTKWALVLKDKTAEGKPPFKSFNEAVRASKV 147

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEI----DAAYRAHRCDAYTGDISA---LYALKL 206
            TTE   A       +           E      A     + DA   +          + 
Sbjct: 148 FTTEYGAAGQATLEKIVSDNQATMINSETPYLEIANVLNGKADAAYDNARVLEFYVFTRS 207

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
            +     + ++      +  + A+ +G  +
Sbjct: 208 QDPTTKMYTLIDPNSPVNQFSFAVKKGRND 237


>gi|213025454|ref|ZP_03339901.1| glutamine ABC transporter periplasmic protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 172

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 8/165 (4%)

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141
           ++      ALQ+K ID+       T  R+    + F    Y  G   ++      I SV 
Sbjct: 1   MDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGYYKSGLLVMVKANNNDIKSVK 58

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  + V++GT +     DY KA+        F  ++        +R DA   D   +
Sbjct: 59  DLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNI 114

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                T     +   + + +       A  +G  E    V+    
Sbjct: 115 LYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKVNGALK 158


>gi|159184329|ref|NP_353507.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159139645|gb|AAK86292.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 253

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 9/164 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++  ++     F      G   GF VD  R + + +  + SK Q   L   E   AL+  
Sbjct: 22  IRFLMSVDFPPFNFTDQEGRLAGFHVDLVREICAQLKVE-SKCQVQALPFDELEAALEMG 80

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAG 153
           + + +      T   ++     F            ++K    +      LSG  + V   
Sbjct: 81  EGEAVISGLATTA--DLRKSFTFSRPYLLLPARLAVNKAGKFTGSGADALSGKKVGVVGN 138

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +  E  L  +F           F+  E +  A +  + DA   D
Sbjct: 139 SRHEQMLKAFFPKA----RVEGFDGYEPMYEALKTGKVDAIFAD 178


>gi|229489069|ref|ZP_04382935.1| ABC amino acid transporter, periplasmic binding protein
           [Rhodococcus erythropolis SK121]
 gi|229324573|gb|EEN90328.1| ABC amino acid transporter, periplasmic binding protein
           [Rhodococcus erythropolis SK121]
          Length = 301

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 14/186 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
               + + L D    G L    +      +       + KGF+    RA+   +  +  +
Sbjct: 53  CGPQSGTTLED----GVLTIATDSPAYAPWFVDNTPSNGKGFEGAVARAVVGKLGYNADQ 108

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KK 134
           +++          AL+    D       +T+  +    + F    Y   Q  I     K 
Sbjct: 109 VRF---TTAAFNDALKPGPKDFDFDVNQFTVSGDRRENVDFSSPYYAVAQSVIASRGSKA 165

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
               +++ L+G  +  Q G+T+   + D          P  F   ++  AA  A   DA 
Sbjct: 166 AEAKNLADLAGYRLGAQTGSTSLAAITDTIV---PTTAPREFATTDDAKAALAAGEIDAL 222

Query: 195 TGDISA 200
             DI  
Sbjct: 223 VVDIPT 228


>gi|86739470|ref|YP_479870.1| extracellular solute-binding protein [Frankia sp. CcI3]
 gi|86566332|gb|ABD10141.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Frankia sp. CcI3]
          Length = 291

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 70/228 (30%), Gaps = 10/228 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDW---KGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           K G L      G   +    A+G     +GF+     A+++ +    +++ ++ +     
Sbjct: 46  KPGQLTIAT--GSPAYEPWFADGRPESGQGFESAVAYAVAAKLGFTAAQVHWMNVPFNSS 103

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F A  +K  D        T  R     + F    Y   Q  +  +   I+ V+ L+G   
Sbjct: 104 F-APGAKNFDFDINEISITPER--RQAVDFSSGYYDVAQAVVALRSSRIAHVTTLAGLKN 160

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
                     +L    K       P VF    E + A      D    D+   + L  T 
Sbjct: 161 AKLGAAIGTTSLTAINKQVKPAAQPAVFNDTNEAETALENGPIDGIVVDLPTAFKLTATE 220

Query: 209 -DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +        P             +G+    N V+     +  + EL 
Sbjct: 221 IENSVIIGQFPSTGEPEQFGLLFEKGNPLVRN-VNAALAELTASGELR 267


>gi|322833087|ref|YP_004213114.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321168288|gb|ADW73987.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 266

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 63/199 (31%), Gaps = 10/199 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ G           + +   KGF  D   A++  I      ++++  +      +L++
Sbjct: 30  VLRVGATPDGYPHYFKEGD-TIKGFSTDILNAVAGKIHYK---VEWVTSDWVGVLGSLET 85

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            ++D +  N   T  R      +                   I  +  + G ++    G+
Sbjct: 86  GKVDTV-GNFADTPERRKKYDYSAPYYYSAAQLAV-SKNNTTIHGLQDMKGKTVAADLGS 143

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L ++   +  +   + FE ++ +  +    + DAY      L       + P   
Sbjct: 144 NYGKVLKEFDPKN--EIRLVTFEGMDVVVNSVAQGKVDAYVSGQVILLGQIKRKNLP--L 199

Query: 215 VILPDIISKSPLAPAIIQG 233
            ++ +      +A    + 
Sbjct: 200 KVVGEPFGLKQVALPFRKD 218


>gi|317472310|ref|ZP_07931638.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
 gi|316900267|gb|EFV22253.1| extracellular solute-binding protein, family 3 [Anaerostipes sp.
           3_2_56FAA]
          Length = 201

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 8/169 (4%)

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++++ + A  R   LQS ++D++  N   T  R+    + +         G +    K I
Sbjct: 1   MEFVLVEAASRVEFLQSNKVDVILANFTVTDERKEV--VDYALPYMKVSLGVVSPNGKVI 58

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + V QL G  + V  GTT E      F         + +++  E   A +  R  A   D
Sbjct: 59  TDVKQLKGKKLIVNKGTTAETY----FTQKYPDIELLKYDQNTEAFNALKDGRGAALAHD 114

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + +YA     +       +  +     +APA+ +G+ +    +     
Sbjct: 115 NTLVYAWA--RENKGFTTGIKSLGEHDFIAPAVKKGNDDLKGWIDDEIT 161


>gi|71735518|ref|YP_274487.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71556071|gb|AAZ35282.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 290

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVISFPALAGLLEKGRTDG-LTGGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +     ++      V+  +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIANG---NVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--------PLAPAIIQGDTEW 237
            +A R D      + + +L    + P     LP                A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKANSPDIERALPFEQIPDASGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EQAFNEQLAKLRASGEL 263


>gi|302341625|ref|YP_003806154.1| PAS/PAC sensor signal transduction histidine kinase [Desulfarculus
           baarsii DSM 2075]
 gi|301638238|gb|ADK83560.1| PAS/PAC sensor signal transduction histidine kinase [Desulfarculus
           baarsii DSM 2075]
          Length = 685

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 69/276 (25%), Gaps = 63/276 (22%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +     +      G   GF+V+   A +  +     +              L+  QID L
Sbjct: 39  DEAYPPYEFNDEQGLPSGFNVEVMSAAARVMG---LRASIRLGPWGPVRAQLERGQIDAL 95

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                       +  + F                  ISS+    G +I VQ G   +   
Sbjct: 96  CGMY---YSPARAEKVLFSRPHLVVSFAVFTRHGSDISSLDDARGRTIIVQQGDYAD--- 149

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            DY  A  +    I  +   +   A  A + D           L       +   + P +
Sbjct: 150 -DYVSAAKLGGRVIRVDSPAKALRALVAGQGDCALVARLQGLYLARRLGLGNIAPVGPPV 208

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
           +                        +A+   +E                     R L   
Sbjct: 209 LP-------------------RQYCFAVKKGDE---------------------RLLAAL 228

Query: 281 KSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
                   LG        +IR  G Y +++D+  G 
Sbjct: 229 NEG-----LG--------VIRASGQYDQIYDKWFGA 251


>gi|186470780|ref|YP_001862098.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184197089|gb|ACC75052.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 324

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 72/234 (30%), Gaps = 22/234 (9%)

Query: 24  ASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A     I  RG L   + +     F   + +G   G D+D  R +++ +       +   
Sbjct: 83  APEFARIIGRGELVVAVLSVDQPPF-FEEHDGKLTGLDIDLAREMAAKLHVKVRFNRDAH 141

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG------ 136
               +    L   Q DI       TL R   +   F        +  ++++ K       
Sbjct: 142 -TFDDTVSLLARGQADIAVSKLSRTLSRATVIA--FSTPYLRLKRALLLNRVKFAQLAHG 198

Query: 137 --ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             +  V +   ++I V A ++    + + F           +   E++  A  A   D  
Sbjct: 199 RSVPEVVRSYDSTIGVVANSSYAGYVINNFP----HAQVRSYATWEDVLKALNAG--DVT 252

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTH 245
                     ++    P+  + L  +  +     LA  +   +    + V+   
Sbjct: 253 AAYRDEFEVKRVLKVDPTASLRLRVVTLQDLEDTLAIGVNVNEPALLSFVNQFL 306


>gi|317055329|ref|YP_004103796.1| family 3 extracellular solute-binding protein [Ruminococcus albus
           7]
 gi|315447598|gb|ADU21162.1| extracellular solute-binding protein family 3 [Ruminococcus albus
           7]
          Length = 260

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 11/112 (9%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            NA        +G L    N     +   + + D  GFDVD   A+   +  +   ++  
Sbjct: 160 ANADT-----SKGKLVMATNAEFPPYEYKEGS-DIVGFDVDMMTAVCQKMGYE---LEIE 210

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            +       A++S + D+       T   +    + F           ++ K
Sbjct: 211 NMLFNSIIPAVKSGKADVGVAGMTVTE--DRQQNVLFSDSYTTTHLVVMVRK 260


>gi|218681105|ref|ZP_03529002.1| extracellular solute-binding protein family 3 [Rhizobium etli CIAT
           894]
          Length = 261

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 63/221 (28%), Gaps = 14/221 (6%)

Query: 34  GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
             +             +    G   G++ D    ++  +     K++Y   +      A+
Sbjct: 32  KSVVVVTENAYPPLQFIDPKSGKAIGWEYDAMNEIAKRL---NFKVEYQNTSWDAMIQAV 88

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASI 148
              Q +     T  T+  +    + F        Q  +      +     S ++     +
Sbjct: 89  SDGQYN--IGMTGITIKEDRKQKVDFSDPYMRSQQFMLVRGDEKRFTDGKSFAEFKDGLV 146

Query: 149 CVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             Q GTT     + +    +       +FE       A +A   D    D +A       
Sbjct: 147 GAQPGTTPFYTAVYEVLDGNEQNPRIKLFETFGATVQALKAGDVDVVLTDGTAGKGYVDA 206

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           ++      ++ + +          +G ++    V+    A+
Sbjct: 207 SN--GALKLIGEPLGTEDFGFIFPKG-SDLVVPVNAAISAL 244


>gi|302879572|ref|YP_003848136.1| diguanylate cyclase with PAS/PAC sensor [Gallionella
           capsiferriformans ES-2]
 gi|302582361|gb|ADL56372.1| diguanylate cyclase with PAS/PAC sensor [Gallionella
           capsiferriformans ES-2]
          Length = 1009

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 72/252 (28%), Gaps = 20/252 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKK---------RGFLKCGINTGLVGFAEVKANG 54
            +FV    L+ L  T    ++       +         +  L  G       FA    + 
Sbjct: 13  TYFVMFFHLLFLVNTVAHASSETQDITSQTPTQVTQLHKATLIVGSEQDYPPFATGMTDA 72

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GF VD  +A++     +        L   +     +  +ID+L          +   
Sbjct: 73  TAGGFTVDLWKAVADEARLNY---TIRVLPFHQLLQEFKDGKIDVLINLA---QSEQRRH 126

Query: 115 GLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F  P     G  F+   K  I +   L G SI V           DY  +     + 
Sbjct: 127 FADFTVPHVIMHGAIFVRRGKNSIHTEDDLHGKSIIVLRADLGH----DYAVSKGWMNNL 182

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           ++ +   E      + + DA             +    +   +   I      + A+ +G
Sbjct: 183 VLVDSPVEGFKLLASGKHDAMLLAKLTGIQTLNSLGLDTVQPLKIKIGFSQKFSFAVAKG 242

Query: 234 DTEWYNIVSWTH 245
            ++    ++   
Sbjct: 243 QSDLLGKINEGL 254


>gi|87121146|ref|ZP_01077037.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Marinomonas sp. MED121]
 gi|86163638|gb|EAQ64912.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Marinomonas sp. MED121]
          Length = 574

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 75/228 (32%), Gaps = 21/228 (9%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
           L+ L   S +  A+   DI     ++ G +     +  + + G+  G++ +   A++  +
Sbjct: 27  LVFLSLFSSTAFAN--QDI-----IRIGGDLDYPPYEFLNSQGEPDGYNTELTLAIAEVM 79

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
                K++++  +       L  ++IDIL            +  L+F P      Q    
Sbjct: 80  G---MKVEFVFDSWSSVRQQLDRQEIDILQGMV---YSDMRAKTLSFSPSHALITQSIFT 133

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            +   + S   L      V      +  + DY   + +  + ++ E   +      +   
Sbjct: 134 RQGLPLISNLNLFNGQDLVVQD---QGIMHDYLVENKVNANLVLVETHADALRLVASGAN 190

Query: 192 D-AYTGDISALY-ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           D A   ++  LY   +L          +           A +Q +   
Sbjct: 191 DYALVANLPGLYLGKELALSN---LRSITQPYGTQRYGYAALQKNENL 235


>gi|88857708|ref|ZP_01132351.1| probable ABC transporter, periplasmic substrate-binding protein
           [Pseudoalteromonas tunicata D2]
 gi|88820905|gb|EAR30717.1| probable ABC transporter, periplasmic substrate-binding protein
           [Pseudoalteromonas tunicata D2]
          Length = 253

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 64/218 (29%), Gaps = 25/218 (11%)

Query: 1   MYKDFFVSIL----CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K F + +     CL ++     +  +           L   I+     ++     G  
Sbjct: 1   MIKHFIIVLFYCSFCLSLVLSMPSAAKSQS---------LTVAIDHS-PPYSYFDDKGRP 50

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G  VD  + +S +   D    +++          +   QID+L      T  RE     
Sbjct: 51  SGLIVDVFQEISRSFNYD---FKFVECPWARCVKLVSEGQIDLL-AGITKTAEREQIFAF 106

Query: 117 AFRPITY--FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
                       + +   K   I +V+ L+  ++ +  G      L      ++      
Sbjct: 107 IEPAFFKRENHFKFYYTDKNLTIDNVADLAPLTVGMLRG-----ALHTKAFDNDQTLSKE 161

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
            F  V+ +  A +  R DA       +       D   
Sbjct: 162 TFVDVQSLFNALQKGRVDAIIHSDQVIQPYLAQYDHAH 199


>gi|224418312|ref|ZP_03656318.1| amino-acid ABC transporter periplasmic solute-binding protein
           [Helicobacter canadensis MIT 98-5491]
          Length = 178

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 9/152 (5%)

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L+S ++D++  N   T  RE    + F         G +  K   I S+  L G  + V 
Sbjct: 1   LKSGKVDVIMANFTKTPEREAV--VDFALPYMKVALGVVS-KDGAIKSIEDLKGKKLIVN 57

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT +      F  ++ +   + +++  E   A +  R DA   D   ++A     + P
Sbjct: 58  KGTTADFY----FSKNHPEIELLKYDQNTETFLALKDGRGDALAHDNLLVFAWA--KENP 111

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              V +  + ++  +APA+ +GD E    ++ 
Sbjct: 112 GFEVGITKLGNEDVIAPAVKKGDKELLEWLNK 143


>gi|229817530|ref|ZP_04447812.1| hypothetical protein BIFANG_02793 [Bifidobacterium angulatum DSM
           20098]
 gi|229785319|gb|EEP21433.1| hypothetical protein BIFANG_02793 [Bifidobacterium angulatum DSM
           20098]
          Length = 296

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 68/251 (27%), Gaps = 19/251 (7%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
            +L L +    +     +    I+  G  L  G+ +   G       G ++G + D  R 
Sbjct: 28  MVLALGLPGLAACGAGQADSSIIQPNGPLLTVGVASDEKGLGFWHE-GAYEGLEADVARY 86

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR---------EISLGLA 117
           ++  +     ++ +  ++   R   L   ++D++                          
Sbjct: 87  VAQKLGYAKKQVVFKQVSPANRLQRLADGEVDMVVAGVPMPDSASYSGTKQIVASDDSAQ 146

Query: 118 FRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGT-TTELTLADYFKAHNMKYHPI 174
           +        Q  +         +  + L   ++C  AG+  +E  LA+  +AH       
Sbjct: 147 YAGPYLTTPQSVLVRPRDVSAATGTAALRDWNVCTVAGSGASERLLAEQPRAH-----IH 201

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 +           A  GD   L  L     R                  A+ Q  
Sbjct: 202 QRGSYSQCVTDLMTGTVRAVAGDAVVLAGLARAQARDVAVPAAKVSYGIVRYGIAVPQPS 261

Query: 235 TEWYNIVSWTH 245
                 V+   
Sbjct: 262 KTLAKNVADAL 272


>gi|291295050|ref|YP_003506448.1| extracellular solute-binding protein family 3 [Meiothermus ruber
           DSM 1279]
 gi|290470009|gb|ADD27428.1| extracellular solute-binding protein family 3 [Meiothermus ruber
           DSM 1279]
          Length = 279

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 78/251 (31%), Gaps = 20/251 (7%)

Query: 1   MYKDFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M +   + +  L  L                          G L    N    GF    +
Sbjct: 1   MKRIGILGLAVLASLGMAQTKIGNCEVTGPKGQFPIRPAVAGQLTVQTNLPGPGFWNGDS 60

Query: 53  NGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
               K GF+      ++     D   +Q +  +A    +A Q++  D        T  R+
Sbjct: 61  PATIKDGFEYCLAANIAHRAGLDKVVVQNVAWDA---LIAGQTRNFDFALSQITITEARK 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
               + F    +    G ++        +S + L  A + VQ  TT    L++  K  + 
Sbjct: 118 RV--VDFSRPYFSSDIGVLVRAADKAKFNSPASLKTARLGVQQATTAAKFLSETLK--HP 173

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
           +    VF  V     A RA + DA+  D S + +    +      V++    +       
Sbjct: 174 QNLTRVFPDVAAGFTALRAGQIDAFIIDTSIVLSEAAKSG--GALVVVGQFSTGENYGAL 231

Query: 230 IIQGDTEWYNI 240
             +G+     I
Sbjct: 232 FTKGNPNRAQI 242


>gi|323497824|ref|ZP_08102838.1| amino-acid ABC transporter binding protein [Vibrio sinaloensis DSM
           21326]
 gi|323317171|gb|EGA70168.1| amino-acid ABC transporter binding protein [Vibrio sinaloensis DSM
           21326]
          Length = 479

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 87/263 (33%), Gaps = 24/263 (9%)

Query: 5   FFVSILCLIILFFTSFSTNASILG------------DIKKRGFLKCGINTGLVGFAEVKA 52
            F ++L +++L F+     A  L              ++K+G ++  +   L GF  V  
Sbjct: 1   MFRAVLFIVLLIFSMTKVQALSLSPLQKEPYFGDLPALEKKGVIRVLVAADL-GFYYV-E 58

Query: 53  NGDWKGFDVDFCRALSSAIFDD--PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
           +G  KG   +        +        +Q +P++  E   +L+    D++  N   T  R
Sbjct: 59  DGKPKGILAELLYHFEKQLKQRSSYFNLQVIPVHRDELIPSLEQGYGDLIVANLTITPSR 118

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAH 167
           +  +  +   +                + ++QLSG  + V+A ++   +   L       
Sbjct: 119 DKGIDFSMPVLRDVKELLVTHASIPAFTDITQLSGKEVWVRASSSYFESLQKLNQLLDEK 178

Query: 168 NMKYHPIVFERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           +     + F        E+          A   D           +    H I+P   + 
Sbjct: 179 DRPPVIVRFVEETLQDIELVELVNQGHIQATILDSHKTELWLKVMENIQVHDIIPLRDNG 238

Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246
             +A A+ +   +  + V+    
Sbjct: 239 E-IAWAMREQSPKLQSFVNQYLK 260


>gi|215275775|sp|Q02RN8|MLTF_PSEAB RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
          Length = 489

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 75/243 (30%), Gaps = 11/243 (4%)

Query: 6   FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           ++    + +L        A   L  ++K G L+         +     NG+  GF+ +  
Sbjct: 14  WLLATGIFLLLAGCSEAKAPTALERVQKEGVLRVITRNSPATY-FQDRNGE-TGFEYELA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +  +  +  +   ++    +  +   A  S++          T  RE    + +      
Sbjct: 72  KRFAERLGVE---LKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLD 128

Query: 125 DGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI 182
                I    +   +    L G  I V  G++    LA+  K +  +KY       V ++
Sbjct: 129 VTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDL 188

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                    D    D + L   ++            +      LA A+  GD    N V+
Sbjct: 189 LRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARG---LAWALPGGDDSLMNEVN 245

Query: 243 WTH 245
              
Sbjct: 246 AFL 248


>gi|298528196|ref|ZP_07015600.1| multi-sensor hybrid histidine kinase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511848|gb|EFI35750.1| multi-sensor hybrid histidine kinase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 1287

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 90/275 (32%), Gaps = 30/275 (10%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +   I+     +  V   G++ G   D    +S  +      I ++ +  K+    L+
Sbjct: 48  GKITMCIDPDWEPYELVDDQGNFTGIAADLVDIVSQRL-----DIPFVIVPTKDWGETLE 102

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152
             +              +    L F    + +   FI       I+  ++L   ++ +  
Sbjct: 103 VSREGGCMLIPFLNQTPDREEWLTFTEPLFTNPNVFITRNEHDYIADPAELVDRTVVLPH 162

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD---------AYTGDISALYA 203
           GT+ E  L   +         I  +   E          D         A+T      + 
Sbjct: 163 GTSMEEYLRQDYP----NLDIITVDDENECYRMVSQGEADMTLRSLTIAAFTIRRDGWFN 218

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           LK++   P +H I       + L   +++   E  +I+S     +   E   I  +++N 
Sbjct: 219 LKISGQPPQDHYI-------NRLRMGVLKDMPELRDILSKAIETITPRERDSIVNEHVNI 271

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           + + + N +    L       I   LG+   W YR
Sbjct: 272 ILEQSFNYE---LLYRVSGGGIVILLGIVL-WNYR 302


>gi|255598576|ref|XP_002537038.1| two-component sensor histidine kinase bacteria, putative [Ricinus
           communis]
 gi|223517718|gb|EEF25345.1| two-component sensor histidine kinase bacteria, putative [Ricinus
           communis]
          Length = 387

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 74/252 (29%), Gaps = 14/252 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F   L +  +     +   S    + +  +L   ++     ++     G  +G   +  
Sbjct: 1   MFACCLRIFAILLLLAAGPVSSAEAVFEHPWLTVVMDDNYPPYSFRDDQGRLQGIRKEMW 60

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-Y 123
            A S+    +   ++ +  +  +    + + Q D++          E      + P    
Sbjct: 61  DAWSAHTGIE---VRIVATDWAKVLAFMNTGQADVID---TIFKTPEREATYTYSPPYAD 114

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
            D   F      GIS V  L G ++ V+ G        D+  A  + Y    +    E+ 
Sbjct: 115 IDVPVFFHQSISGISGVDNLHGFTVGVKRG----DACEDWLHARGI-YSTHDYPSFGEMV 169

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A   +       D           +  +       +         +   D  +  I   
Sbjct: 170 DAAVHNEIRVMCIDKPLANYFLTRRNAENTFRYSKPLYMGQLHWAVLKGKDATYQAISRG 229

Query: 244 THYAMVTAEELG 255
             ++++ +EE  
Sbjct: 230 --FSLIPSEEAD 239


>gi|304395805|ref|ZP_07377688.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304357099|gb|EFM21463.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 282

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 66/247 (26%), Gaps = 32/247 (12%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              K+   +          +      G   GF+ +    L   +     + + +  N   
Sbjct: 26  AQAKEWKSITIATEGSYEPWNLTLPGGKLGGFEPELMADLCQRM---AIQCKLVVQNWDG 82

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS------ 141
               L + + D++      T  R+    + F          FI  K   + + S      
Sbjct: 83  MIAGLNAGKYDVIMDAIVITPDRKKV--VNFTVPYASTPATFITVKGSLLPADSKIIKLT 140

Query: 142 ---------------QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                           L G +I + +GT     +  YFK          +    +     
Sbjct: 141 DDEKTIEPAIAPLKAALKGKTIGIASGTVYTPFIDKYFK---GVADVREYTSSADAILDL 197

Query: 187 RAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A R DA   D++   ++    D          L   I     A  +   D +    +  
Sbjct: 198 QAGRIDAVFDDVTFAQSMLARPDNRNLSFSGPQLGGPIWGEGEAMGVRMADNDLKARLDQ 257

Query: 244 THYAMVT 250
              A + 
Sbjct: 258 AIKAALA 264


>gi|262402780|ref|ZP_06079341.1| transglycosylase Slt family [Vibrio sp. RC586]
 gi|262351562|gb|EEZ00695.1| transglycosylase Slt family [Vibrio sp. RC586]
          Length = 508

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 23/243 (9%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           + L+++     S   S L  I++RG L+ G        +         G D +  R  + 
Sbjct: 1   MSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAK 58

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT------- 122
            +           L++   F AL++ ++DI++     +  R                   
Sbjct: 59  ELGVKLEMKPAYRLSS--LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVY 116

Query: 123 ------YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIV 175
                   + +  +  +++ + S   L+  S  V   +  E TL A   +  + ++H   
Sbjct: 117 KKGDWRPRNFKQLVEKQQELLKSNPDLAFFS--VVDDSHFEHTLQAKQQRHPDFQFHVDN 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
              V E+           +T   S   +L        E     ++    P++  I + D 
Sbjct: 175 NSDVNELLKKVSQGEL-MFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDD 231

Query: 236 EWY 238
           E  
Sbjct: 232 ESL 234


>gi|255022567|ref|ZP_05294553.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes FSL J1-208]
          Length = 219

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 70/201 (34%), Gaps = 5/201 (2%)

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           +  NG   G+DV+  + +   +       ++  ++     ++L + ++DI++   + +  
Sbjct: 1   MDENGKLTGYDVELVKEIDKRLPGYKF--KFKTMDFSNLLVSLGAGKVDIVAHQMEKSKE 58

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           RE            F  Q  ++     I+    L+G  +   A +   L L    +    
Sbjct: 59  REKKFLFNDVAYNNFPLQLTVLDSNNSINGTKDLAGKRVITSATSNGALVLKKINEEQGN 118

Query: 170 KYHP-IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
            +      +   +     +  R DA     +             +  ++ D++S + +  
Sbjct: 119 NFEIAYEGQGSNDTANQLKTGRADATIS--TPFAVDFQNKTSAIKEKVVGDVLSNAKVYF 176

Query: 229 AIIQGDTEWYNIVSWTHYAMV 249
            + + +T+    V     +++
Sbjct: 177 MLRKDETKLSKDVDEALQSII 197


>gi|54297081|ref|YP_123450.1| hypothetical protein lpp1126 [Legionella pneumophila str. Paris]
 gi|53750866|emb|CAH12277.1| hypothetical protein lpp1126 [Legionella pneumophila str. Paris]
          Length = 231

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 12/224 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I K G L          F     +    GFD D  + +   +     +I+Y   N  + F
Sbjct: 2   ILKPGKLLVATAYPDPPFDIEPGD----GFDGDLIKEICRILNLQLVQIKYEGENFNDIF 57

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGAS 147
           L L +K+ D++   T  T  R  S  + F        QG  ++ +    +SS   L G  
Sbjct: 58  LGLANKEYDVVISGTTITPNR--SKQVLFSNPYLEFNQGIAVNTELKPNVSSFEDLKGLV 115

Query: 148 ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
             +Q G T++    D  + +         +  +E       A +          +  L  
Sbjct: 116 AGIQKGNTSDEVAQDLLRKNILSDIKYYAYNEIELAIQDLSAGKIGLVIKLYPVISCLIR 175

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                    +     +   L  A+ + + +  + V+     ++ 
Sbjct: 176 NYTN---LAVPLQAETHEKLRIAVAKDNFKLRDKVNLILADLMQ 216


>gi|320199099|gb|EFW73696.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI
           [Escherichia coli EC4100B]
          Length = 94

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 16/103 (15%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++    L  T+                ++         F  + AN    GFD
Sbjct: 1   MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           VD  +AL   I    +   +          +L+ ++++ +   
Sbjct: 48  VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAG 87


>gi|319956810|ref|YP_004168073.1| histidine kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419214|gb|ADV46324.1| histidine kinase [Nitratifractor salsuginis DSM 16511]
          Length = 1109

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 67/222 (30%), Gaps = 13/222 (5%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
            +    F     NG  KGF +D+   ++  I      +        E    + S ++D++
Sbjct: 352 ESNWPPFNF-NENGQAKGFSIDYMNLIAEKIGVKVKYVS--GYTWYEFLQMINSDKLDVI 408

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELT 159
             N   T  R+  +   F                 +   S+  L+G  + +  G   +  
Sbjct: 409 -DNIAITKDRKKFVR--FTHPYIDLRHAIYTQVNNQVYFSLKDLAGKKVALVQGFFIQQY 465

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN--DRPSEHVIL 217
           LA ++     +   ++              R DA  G    +  L              +
Sbjct: 466 LAKHYP----RIKQVLVPDQLSALKLLSLGRVDAVIGKQVVVDYLMRQYLISNIIATSYV 521

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            D  + S +A  + + D     I+S     +   E   +  K
Sbjct: 522 QDPGTISHVALGVSKKDKILARILSKAQKTVTRKELDQLKHK 563


>gi|197105461|ref|YP_002130838.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Phenylobacterium zucineum HLK1]
 gi|196478881|gb|ACG78409.1| cystine ABC transporter, periplasmic cystine-binding protein
           [Phenylobacterium zucineum HLK1]
          Length = 260

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 76/222 (34%), Gaps = 10/222 (4%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           D++  G    G +   V F+ +        G  +D   A ++      + +    +    
Sbjct: 33  DVRAAGGFIVGSSATGVPFSFLDVETNALTGAMIDIVEATAAEAG---APVALQVVPFSA 89

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              +L +++ID+++     T  RE  +  +     Y  G        +    +  L G  
Sbjct: 90  LIPSLTARKIDVIAAAMLRTPERERIVAFSDPVYAYGGGLVVAAGNPRDYGRLEDLRGLR 149

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA-LYALKL 206
           +  Q G+       D  KA  +      ++ + +I    R  R DA  GD     Y L++
Sbjct: 150 VGAQVGS----RFVDQLKAAGVSG-VKTYDNLSDILRDVRLKRLDAAYGDEPILRYYLRV 204

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           T  +    V      +   +   + + D    + ++    A+
Sbjct: 205 TRSKALRLVESYRPTALEDVCLILRKDDRALLDRINTAIAAI 246


>gi|207111016|ref|ZP_03245178.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Helicobacter pylori HPKX_438_CA4C1]
          Length = 71

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F  V + G ++G+DV   + ++  +  D +KI+++P+ A  R   L++ ++DI+  N 
Sbjct: 2   PPFGSVDSKGKYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANF 61

Query: 105 DWTLLREI 112
             T  RE 
Sbjct: 62  TRTKEREK 69


>gi|166007118|pdb|2PYY|B Chain B, Crystal Structure Of The Glur0 Ligand-Binding Core From
           Nostoc Punctiforme In Complex With (L)-Glutamate
          Length = 218

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 66/211 (31%), Gaps = 17/211 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L       +  F          GF +D  R++++ I  +   I+Y  +   E   A++  
Sbjct: 2   LLVATRV-IPPFVLSN----LSGFSIDLWRSIATQIGIESKLIEYSSV--PELISAIKDN 54

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++++       T  RE      F    +  G   ++     I S+  L G  +   AG+T
Sbjct: 55  KVNLGIAAISITAERE--QNFDFSLPIFASGLQIMVRNGD-IRSIDDLPGKVVATTAGST 111

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               L +           +   ++EE   A +  + DA   D   L        +     
Sbjct: 112 AATYLRE------HHISVLEVPKIEEAYKALQTKKADAVVFDAPVLLFYAANEGKGKV-E 164

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           I+  I+ +      +         I      
Sbjct: 165 IVGSILREESYGIILPNNSPYRKPINQALLN 195


>gi|288573406|ref|ZP_06391763.1| diguanylate cyclase with extracellular sensor [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569147|gb|EFC90704.1| diguanylate cyclase with extracellular sensor [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 499

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 73/228 (32%), Gaps = 13/228 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K RG ++  ++     +  +  +G ++G   D+ + LS  +      +     + +E   
Sbjct: 43  KDRGPIRFSVDPSWAPYEWIDESGKYRGVGADYLKLLSGKLGVVMELVPTR--SWEETLE 100

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASIC 149
            +++   D++    + T  RE  LG  F      +    +       ++    L+G ++ 
Sbjct: 101 FVKAGSSDVV-PLLNRTKDREEFLG--FTSPYVINPAVIVTRDDVSDLAGFMDLAGKTVA 157

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  G      + D  +        +      E      +     ++     + A  L ++
Sbjct: 158 VVKG----YNVEDILRERYPDLSIVPVANNREGLRMVASGE--VFSTSAPLIVASLLIDE 211

Query: 210 RPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
                + L         L   I + D     I+     ++   E   I
Sbjct: 212 DGLTGLKLWGHDDFEHRLRMGIRKDDPILLGIMQKAVLSLNLKESSRI 259


>gi|85712314|ref|ZP_01043365.1| Signaling protein with a periplasmic binding domain and GGDEF
           domain [Idiomarina baltica OS145]
 gi|85693941|gb|EAQ31888.1| Signaling protein with a periplasmic binding domain and GGDEF
           domain [Idiomarina baltica OS145]
          Length = 474

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 73/215 (33%), Gaps = 18/215 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F              +        + +   ++ G+ T L+    +  +GD  GFD
Sbjct: 1   MKNVKFWLSTIACFWLSLVHAATLDTDEWLAQHNTVRVGVPTNLMPLIGI-ESGDGIGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYL-PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            D  R ++  +   P  I++    +      AL+ ++IDIL      +   + S   +F 
Sbjct: 60  ADMLRLITQKL---PLTIKWQDCGSWSRCLKALEQREIDILP---SMSYSEDRSRYTSFT 113

Query: 120 PITYFDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              +      +   K+ ++     +V  L G  + +    +    L      +      I
Sbjct: 114 QRYWSMPWAVLYRNKETLNARGSVNVGDLRGQRLGIIQDYSVVSLLR-----NQRGTEVI 168

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
            ++ +E+   A + ++ + Y   +  L      + 
Sbjct: 169 EYDNIEQATKALKENQINVYVDSLPILVYELQNHP 203


>gi|239635974|ref|ZP_04676991.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus warneri L37603]
 gi|239598439|gb|EEQ80919.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Staphylococcus warneri L37603]
          Length = 285

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 81/252 (32%), Gaps = 12/252 (4%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKANGDW 56
           M      F ++IL L +    S S + +          +K  ++  +   +     N  +
Sbjct: 1   MKHIRMYFILTILILSVSLLYSCSNDKAQHATKSHPKEVKVALSAEVNPPYLYTDKNNHF 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G D+++ + L   +       +Y     +   + + SK+ D+       T  RE     
Sbjct: 61  IGLDMEYMKLLEKKL--PQYDFKYEVGEEESNLVGIGSKKFDMGINWFFKTPEREKQFLY 118

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA---HNMKYHP 173
              P +Y      +  K   I  +S L+   +   A +    ++   +       +    
Sbjct: 119 QDVPYSYALPMFAVNKKNNDIHQLSDLTQKRLTPMAPSGGLFSILKQYNQTHDKKIDIDT 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I      +        R DA   +       K   D+  E V +  I+ K PL     + 
Sbjct: 179 IQSPSNGDNLKMVGNGRRDAMFLN---WNTYKAIQDKVHEDVKIGGIVKKEPLHIVYNKD 235

Query: 234 DTEWYNIVSWTH 245
           + + ++ +    
Sbjct: 236 NQQLHDDIDQAT 247


>gi|22796426|emb|CAC93673.1| putative amino acid ABC transporter binding protein [Lactococcus
           lactis]
          Length = 139

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/138 (10%), Positives = 39/138 (28%), Gaps = 6/138 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58
           M     V+   L ++   +    +S            +    +     F    + G+  G
Sbjct: 1   MRTSLKVTFAALSLIAAGTLVACSSGSKKTSDNKTTSIVIATDGATKPFTYSDSQGNLTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D++  RA+   +      +++   +       + S +  + + +  W   R       F
Sbjct: 61  YDIEVARAVFKKM--PQYTVKFQATDFSGIAPGIDSGRYQMGANDFGWEKSRAE--KYYF 116

Query: 119 RPITYFDGQGFIMHKKKG 136
                      ++     
Sbjct: 117 SSPLSKSNNAVLVKSGTY 134


>gi|298290388|ref|YP_003692327.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296926899|gb|ADH87708.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 310

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 73/253 (28%), Gaps = 25/253 (9%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALS 68
             +     +       L    K   L   IN    G+  +       + GFD+D   A+ 
Sbjct: 47  ASMPAACAALQAKYPSL----KGKTLINAINPHTPGYETIDPADPTKYIGFDIDLGEAIG 102

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
             +     K+ Y P+        LQ++Q DI+  +   T  R       F         G
Sbjct: 103 ECLG---FKLTYKPVTFAALLTTLQAEQADIVISDIYATKERAK--AADFI-TYLKVFDG 156

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTL-------ADYFKAHNMKYHPIVFERVEE 181
            ++ K                V A  T  + +       A+  KA       ++F+    
Sbjct: 157 VLVAKGNPKGIDGINLSLCGAVAAENTGYVEVPLIQALEAECKKAGKPAPEILLFDNNAN 216

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYN 239
              A  A R D Y  D++ +                  +    P     A+ +   E+ +
Sbjct: 217 CIQAILAGRADTYINDVNTVDGAVKAYPDKLAKATAVTL----PYSVGIAVPRNKVEFRD 272

Query: 240 IVSWTHYAMVTAE 252
            V      +  + 
Sbjct: 273 AVMAALTEIQKSG 285


>gi|289178527|gb|ADC85773.1| Glutamate-binding protein [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 328

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 75/276 (27%), Gaps = 30/276 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             +   + +      T+ ++    + +G  +  G+     G      +G++ G  V+  +
Sbjct: 43  AILTISLAVGLCGCGTSVNVSAPGQAKGPVMSIGVPADEPGVGWY-HDGEYSGLSVEVAK 101

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN-----------TDWTLLREISL 114
            ++  +     ++ +       R   L    +D                 D T   +   
Sbjct: 102 YVAKVLGYGDEQLFFHSQTPATRLDRLDDGSVDFAMVTFAYDGGKNALEMDHTQTADG-T 160

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                          ++       +  V  L G ++C  AG  +   L D     + +  
Sbjct: 161 RYEVSGPYLVARNQLLVRADDARRLPDVQSLDGRTVCTVAGEYSGEQLHD----RHPRIK 216

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +      E  A+    + DA  G    L  L+        H+   D         A+  
Sbjct: 217 ILQRADYSECSASLLVGQSDAIAGPQPILAGLRKDGGTRYLHLQ-EDSYGTQAFGIAVKA 275

Query: 233 GDTEWYNIVSWTHY---------AMVTAEELGITQK 259
              +   ++              A + A E  +   
Sbjct: 276 DQRKLMELIDTALQQMVDDGAWDAQIDAMETELGMH 311


>gi|262275123|ref|ZP_06052934.1| binding protein putative [Grimontia hollisae CIP 101886]
 gi|262221686|gb|EEY73000.1| binding protein putative [Grimontia hollisae CIP 101886]
          Length = 319

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 72/263 (27%), Gaps = 42/263 (15%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
             + A    DI+ RG +   +      ++     G+  G DV+   AL++ +        
Sbjct: 20  APSQALSYDDIQARGVIAIAVYKDFPPYSFTDGEGNPAGIDVELASALANGLGVKLD--- 76

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLL----------------REISLGLA------ 117
              L        ++    + L +  + T                  RE ++         
Sbjct: 77  ---LRWMTPDETVEDDMRNYLWKGINLTSEDGQRVKADVMLRVPYDREFAMKRDDVGHPA 133

Query: 118 ------FRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                 F P         +   K     + ++     + V+  T  +  +   F     +
Sbjct: 134 HELVHMFAPYQQERWLMAYDTAKLDRPQTAARFMYHPVGVEVDTVPQFYVTTAFGGR-FR 192

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                +    +   A          G  S L      N +P  +  L ++       P +
Sbjct: 193 DKSRTYSSTPDAFQALNDGEVAIVMGTASQLE-WLHYNKKPQANEQLAELAF-----PLL 246

Query: 231 IQGDTEWYNIVSWTHYAMVTAEE 253
            + + E    V   +  +  A E
Sbjct: 247 GRSEWELGMAVHSNYRQLAYALE 269


>gi|290960131|ref|YP_003491313.1| solute-binding transporter [Streptomyces scabiei 87.22]
 gi|260649657|emb|CBG72772.1| putative secreted solute-binding protein (transport system
           associated) [Streptomyces scabiei 87.22]
          Length = 311

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 74/272 (27%), Gaps = 25/272 (9%)

Query: 2   YKDFFVSILCLIILFFTSFS-------TNASI------LGDIKKRGFLKCGINTGLVGFA 48
            +        L+       +         A        L  ++ RG ++ GI      + 
Sbjct: 21  RRTLLTGTAALVGTGAAVGASSGCSRVATADTGDGGQLLQQLRARGTVRLGIAGEQ-PYG 79

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +  +G+  G      R +   +  D   ++  P         L S Q D+++       
Sbjct: 80  YIGKDGEVTGSAPAIARRIFRRLGVD--HVEPFPTEFGSLIFGLNSLQFDVVAAGMYINP 137

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R     + F    Y     FI+ +       +    A    +  T       DY K   
Sbjct: 138 ER--CEQVLFADPEYQMKDAFIVPRGNPKKLRTYADIARTGARMATGIGYAEIDYAKEAG 195

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPL 226
           +K H            A    R D + G          +  + +      +  ++   P+
Sbjct: 196 VK-HIDTLPDQLAGLLAVEQGRVDVFAGTAVTVRNVVKQTGSTKAEATDEVTPVMDGKPV 254

Query: 227 ----APAIIQGDTEWYNIVSWTHYAMVTAEEL 254
                 A    +    +  +   + M  + EL
Sbjct: 255 VDVGGFAFRMPERNLRDAFNRELHRMKRSGEL 286


>gi|218660404|ref|ZP_03516334.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli IE4771]
          Length = 301

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 7/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   + +S + L +L  T+ +  ++    L  +K++GF +  I      F  V A+G   
Sbjct: 20  MKAGYVLSAVSLSVLLVTAAAPASADDDKLEQLKEQGFARIAI-ANEPPFTAVGADGKVS 78

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   D  R +   +                    LQ+ + D ++        R  ++  +
Sbjct: 79  GAAPDVARVIFEKLGVKEVVASIS--EYGAMIPGLQAGRHDAITAGLFMKPERCSAVAYS 136

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
              +   +           ++S   ++                    +A   +   IV  
Sbjct: 137 EPILCDAEAFALKKGNPMKLTSYKDIADNPNAKIGAPGGGTEEKLALEAGVPRDRVIVVP 196

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
             +      +  R D Y+  + +++ L      P+   + P + +       A  + D  
Sbjct: 197 DGQSGIKMLQDGRIDVYSLPVLSIHDLMAKAKDPNLETVAPVVNAPVYCDGAAFRKQDVA 256

Query: 237 WYNIVSWTHYAMVTAEELG 255
             +        +  + E  
Sbjct: 257 LRDAFDVELKKLKESGEFA 275


>gi|91781316|ref|YP_556523.1| polar amino acid ABC transporter periplasmic ligand-binding protein
           [Burkholderia xenovorans LB400]
 gi|91693976|gb|ABE37173.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 296

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 76/233 (32%), Gaps = 10/233 (4%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             ++  G L  G+      +  + A+G  +G DVD    ++  +   P   Q   +    
Sbjct: 47  ASVRDAGALTVGMPLDYEPYNFMGADGKAQGLDVDIFNGIAETLGLKP---QINRMGFAS 103

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              A+   +I +          R     ++F   +       +        +     G +
Sbjct: 104 IIPAVSGARIQVGMSGIGILPARLKV--VSFVRYSVATNGLVVASGNPAKINTHDACGHT 161

Query: 148 ICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-TGDISALY 202
           I ++ GT+ EL       D  K    K + +V +       A ++ R +A   G  +A+ 
Sbjct: 162 IALEKGTSPELYWETAANDCTKQGKPKMNLLVLDGEGPQMLAIQSGRAEAAGVGYATAVV 221

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             + +  + S          +     AI + D +  N ++     MV      
Sbjct: 222 VAQHSGGKLSVAEGGAAPGGELDCGVAISKDDPQLGNAIAAALKVMVANGSYD 274


>gi|146295101|ref|YP_001178872.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145408677|gb|ABP65681.1| periplasmic sensor diguanylate cyclase/phosphodiesterase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 1015

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 79/250 (31%), Gaps = 19/250 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   V I+ +++ F TS                +K  ++     F+ V  NG   GF 
Sbjct: 1   MKRTLKVIIISILLFFLTSQVAYCY-------HKTIKFQVDKQYPPFSYV-INGRVYGFS 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    +      D   +       +  +  L S +ID ++        R+    + F  
Sbjct: 53  GDLANLIFE---PDKYFLSVSSDTWENVYKRLVSGEID-ITGPIVILEERKK--DVYFTD 106

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
             +    G    K    + +V+ L+   I V     TE  L +  K  N     + F+ +
Sbjct: 107 PIFTRHVGIYTRKDFNKVITVNNLASFKIGVMKSDYTETLLKERLKIKNY----LTFQTI 162

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+   A    + DA            + N+   +  I    I        I +   E   
Sbjct: 163 EDEFVALLEGKVDAVIISQEIANYFLVKNNYADQVEIKLKDIFILESGFGISKRRPELVG 222

Query: 240 IVSWTHYAMV 249
            V+     ++
Sbjct: 223 YVNARLKELI 232


>gi|218510526|ref|ZP_03508404.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
           Brasil 5]
          Length = 276

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 84/269 (31%), Gaps = 29/269 (10%)

Query: 18  TSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIF 72
           ++ + +A         ++K G L+CG       +       G++ GF  D C+  +  + 
Sbjct: 22  SATAAHAQTAEGYWQGVQKAGALRCGAAVA-PPYVMRDPATGEYTGFFADLCKEFADVLK 80

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             P    ++          LQ+ + D+   +         ++ + F             +
Sbjct: 81  VKPE---FVDTTWDNIVAGLQAGKWDL---SLALNRTPARAMAVQFSIPAMEYQISLAYN 134

Query: 133 KKKG-----ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           K        ++SV+ +   G ++ V +GT  +  ++   K        +     +E   A
Sbjct: 135 KNNPKIAAGVASVADIDKAGVTLAVMSGTAQDKAISAAVK----NATIMRLPGNDETRLA 190

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             + R D              T   P   V L    + +    A      +         
Sbjct: 191 VTSKRADILVDASDTN--QLFTQSNPDWAVALNPTPALAKQGVAF-GLPHQLSAADVEVI 247

Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              +   E  +   +++++ +   +  ++
Sbjct: 248 NIFL---EERVATGHVDELIRKAVDEVLK 273


>gi|317154349|ref|YP_004122397.1| PAS sensor protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316944600|gb|ADU63651.1| PAS sensor protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 1100

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 17/198 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +   L + FF++              G ++ G        +    +G   G  
Sbjct: 1   MKPRIAFAAALLCLTFFSALPAQ----------GVVRVGYFEN-PPVSHADEDGAVLGLA 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  R ++     D   I ++  +A E    L + + DI           ++   + F  
Sbjct: 50  PDILRTIAQGRGWD---IAFVQGSASECLDRLGTGETDICVGTPFV---YKLFDSIVFTT 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +     G I      +S+V  L+G  + V+       +         + +  + F+  +
Sbjct: 104 NSILSDWGAIYVDGLAVSNVQDLAGRRLGVRRDCPHVESFKRLAGGMGVGFTLLEFDSYD 163

Query: 181 EIDAAYRAHRCDAYTGDI 198
            + +A R    DA   + 
Sbjct: 164 AVLSAIRQGEVDAGIANR 181


>gi|300021639|ref|YP_003754250.1| methyl-accepting chemotaxis sensory transducer [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523460|gb|ADJ21929.1| methyl-accepting chemotaxis sensory transducer [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 567

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 59/211 (27%), Gaps = 24/211 (11%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKI 78
            S     L  IK+RG L+ G+  G VG +  +   +   G DVD+ RA + +I       
Sbjct: 274 LSPATDRLEQIKRRGVLRVGVEPGFVGLSFRRRPREPLMGLDVDYARAYAQSIG---VTC 330

Query: 79  QYLPLNAKERFLALQSK------QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +++          L          +D++               +A+     +        
Sbjct: 331 EFVEYPWDALTGLLHVGIKEGEQPVDVIWSALPPNAT---YRQVAYSDTYTYLPFVLARR 387

Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTL----------ADYFKAHNMKYHPIVFERVEE 181
                I  +  L G  + +         L           D         + + +     
Sbjct: 388 VGDMRIRKLDDLDGKVLGIINDPGAFEVLDTYGVRWSANKDKPGRKISLANLVAYSDQGR 447

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           I       + DA+  D+   +        P 
Sbjct: 448 IHDCLAEGKVDAFCVDLPIYHWACSNPSSPW 478


>gi|320158828|ref|YP_004191206.1| extracellular solute-binding protein family 3/GGDEF
           domain-containing protein [Vibrio vulnificus MO6-24/O]
 gi|319934140|gb|ADV89003.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio vulnificus MO6-24/O]
          Length = 457

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 85/250 (34%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++  +I  F+SF +        ++R  L+   +     F+ +  +G  +G  
Sbjct: 2   MKKSAILLLVFSLIGLFSSFVSAEE-----QERKTLRVTNSKAWKPFSYLAEDGSPRGIL 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +        D   I+++ ++  +   A++  + D+      W+  RE  L   F  
Sbjct: 57  IDLWKLYGEQNGVD---IEFVLVDWNDSLTAVEEGKADVH-AGMLWSEPRE--LRFDFAE 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQL----SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                     + ++   + ++          + V  G   E  +  +F         + F
Sbjct: 111 PIMTINTQLYLSQRIITTDLNFFLTGDGNRGVGVVEGGYEEYFVQTHFPK----LPLVRF 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-----PSEHVILPDIISKSPLAPAII 231
           +    +  A      DA+  D+        T  +     P+ ++   +I        A++
Sbjct: 167 KNNRLMMEAAFREEIDAFVADLQVANFYIYTTAQTVTFIPALYLYSGEIRPAVAEGSALL 226

Query: 232 QGDTEWYNIV 241
                 + +V
Sbjct: 227 STINAGFKVV 236


>gi|158523280|ref|YP_001531150.1| histidine kinase [Desulfococcus oleovorans Hxd3]
 gi|158512106|gb|ABW69073.1| histidine kinase [Desulfococcus oleovorans Hxd3]
          Length = 565

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 70/227 (30%), Gaps = 10/227 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +  F+ +  ++ LF      +  +  + +    ++ G+           + G+  G  +D
Sbjct: 11  RSSFIILFSVLSLFVLPVFASPPVHAEAR---LVRVGVYENAPKVFVDGSTGEPAGIFID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               ++ +   +   ++Y+     E    L+   ID L  +   T  RE        P+ 
Sbjct: 68  VLEHVAKS---EGWTVEYVSGTWGEGLDRLERGDID-LMPDVAHTSDREKIFAFHKTPV- 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                     K  GI S+  LSG  + V   +  +           +    +       +
Sbjct: 123 LSSWFQVYARKGSGIRSIVDLSGKRVAVLERSVQQAAFVRLADGFGLNATIMSLPDYATL 182

Query: 183 DAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDIISKSPLA 227
                    DA   +     ++A +   +  +      ++   +P  
Sbjct: 183 FDLVARGEADAAVTNRFYGLMHAKRFGLEDTAIVFNPSNLFFAAPKG 229


>gi|237786314|ref|YP_002907019.1| hypothetical protein ckrop_1755 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237759226|gb|ACR18476.1| hypothetical protein ckrop_1755 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 370

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 71/234 (30%), Gaps = 13/234 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           +   S+   +K++G    G +        +  +G   +G ++D  +A+           Q
Sbjct: 113 AIANSVPAALKQKGTFTVGTSADFAPLEFIGNDGKTIEGAEIDMAKAVGDLFG---LTTQ 169

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +   +      ++ + + D    + D    R     +    +     +  ++        
Sbjct: 170 FTNASFDSLVASVGT-KYDAGFSSFDVKPERLEHTNM--VTLYTSGTKYSVLKDNPRDID 226

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCDAYT 195
            S + G S+ V  G+  E    D                 ++   ++  A    + D + 
Sbjct: 227 PSDICGDSVAVLTGSVYEEMANDKNDECKHNGKKGVTIQSYKNSADVATAVAGGKADLWF 286

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            D                   +  ++  +P A  + + DT+  + +      ++
Sbjct: 287 SDSP--VVDYAEKQSKGRVQPIGKVVDSTPKAAIVAKNDTQLADAIHAAIQKLI 338


>gi|313672134|ref|YP_004050245.1| multi-sensor hybrid histidine kinase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312938890|gb|ADR18082.1| multi-sensor hybrid histidine kinase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 834

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   +  + L+ILF      + S L       +K +  +          F  +    +
Sbjct: 5   MRKIIILIGVSLLILFSCYIVFDDSSLTREEKEYLKHKKEIVFVSQINYPPFEFLSDRLE 64

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G  V+  R +S+    +    +++          + + + D+L   T +    E +  
Sbjct: 65  SSGMMVELARLMSTEFGFES---RFINTTFARAQQMILNGEADVL---TSFFFSEERNKK 118

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F  + +       + +    I  +S L G  + +Q G        D+ K+  ++   I
Sbjct: 119 FNFTKVVFEIPASIFVKQDNDDIKKLSDLHGKRVAIQKGDYAI----DFIKSKGIRIDLI 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +              +A  GD   ++     N+  SE  ++ + +       A  + +
Sbjct: 175 ETDDFIMATNKLIKGEVEAVIGDDQIIFYYLSRNNLVSELKVVGEPLYIGENCMATRKSE 234

Query: 235 TEWYNIVSWTHY 246
               +I++    
Sbjct: 235 KILVSILNKGIN 246


>gi|308186171|ref|YP_003930302.1| ABC transport system, substrate-binding periplasmic protein
           precursor [Pantoea vagans C9-1]
 gi|308056681|gb|ADO08853.1| Putative ABC transport system, substrate-binding periplasmic
           protein precursor [Pantoea vagans C9-1]
          Length = 299

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 66/247 (26%), Gaps = 32/247 (12%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
              K+   +          +      G   GF+ +    L   +     + + +  N   
Sbjct: 43  AQAKEWKSITIATEGSYEPWNLTLPGGKLGGFEPELMADLCQRM---AIQCKLVVQNWDG 99

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS------ 141
               L + + D++      T  R+    + F          FI  K   + + S      
Sbjct: 100 MIAGLNAGKYDVIMDAIVITPDRKKV--VNFTVPYASTPATFITVKGSLLPADSKIIKLT 157

Query: 142 ---------------QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                           L G +I + +GT     +  YFK          +    +     
Sbjct: 158 DDEKTIAPAIAPLKAALKGKTIGIASGTVYTPFIDKYFK---DVADVREYTSSADAILDL 214

Query: 187 RAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A R DA   D++   ++    D          L   I     A  +   D +    +  
Sbjct: 215 QAGRIDAVFDDVTFAQSMLARPDNRNLSFSGPQLGGPIWGEGEALGVRMADNDLKGRLDQ 274

Query: 244 THYAMVT 250
              A + 
Sbjct: 275 AIKAALA 281


>gi|78486259|ref|YP_392184.1| diguanylate cyclase [Thiomicrospira crunogena XCL-2]
 gi|78364545|gb|ABB42510.1| diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
           [Thiomicrospira crunogena XCL-2]
          Length = 893

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 16/222 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K   +     F  +   G ++G   D+      A+      +++    +      L  
Sbjct: 348 VIKLANDIDWEPFEFIDKEGHYRGIAADY-----FALLGQKLGVRFEAQKSLGWAEVLSK 402

Query: 95  KQIDI--LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQ 151
            +     +      T  RE  +   F              K    I S   L G  + V 
Sbjct: 403 TKAGQLDIFSCAVATPEREQYMR--FTKPYLSFPMVLAGRKNVSFIESYDTLKGEKVAVV 460

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G  +  TL  ++ +       ++   V+E   A    R   Y+G++ A+          
Sbjct: 461 KGYWSHETLTQHYPS----IQLVIVNSVKEGLEAVMDGRAKVYSGNLGAINYAIHKYGVT 516

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
             HV+         LA  + + D   ++I+     A +T EE
Sbjct: 517 GLHVVGQSSHRFE-LAIGVTKDDPVLFSILQKGL-ASITEEE 556


>gi|218282519|ref|ZP_03488769.1| hypothetical protein EUBIFOR_01351 [Eubacterium biforme DSM 3989]
 gi|218216506|gb|EEC90044.1| hypothetical protein EUBIFOR_01351 [Eubacterium biforme DSM 3989]
          Length = 950

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 70/205 (34%), Gaps = 13/205 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   V    + ++        A           ++ G       F  V  +G  +G+  +
Sbjct: 31  KRLAVLCTIIFVVLSMCMPCLADETQK-----TIRVGSFEDT--FNYVDEHGARRGYGYE 83

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +AL+        K +Y+  +    F  L++ +ID +  +  +T  R   +  +   + 
Sbjct: 84  LMQALA---GYTGWKFEYVKCDWSNCFDKLENGEID-IMGDIAYTDDRAKEMLYSEETMG 139

Query: 123 YFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +       I S     L+G  I V  GT +E  L ++   + +    +     E
Sbjct: 140 EEKYVLYADLSDMDIVSSDFKSLNGKCIGVLKGTNSEYMLTNWENKYGIHTEHVNVSGNE 199

Query: 181 EIDAAYRAHRCDAYTGDISALYALK 205
           ++      +  D +     ++++ +
Sbjct: 200 DVKKKLANNEIDCFVSLEESIWSER 224


>gi|306842437|ref|ZP_07475088.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
 gi|306287293|gb|EFM58773.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. BO2]
          Length = 241

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  +AL   +       Q       E    +   
Sbjct: 10  LRFITTVDFPPFNRLNERGQLSGYNIDLAKALCQQL-KIEDICQIEAAPWAELEERVLDG 68

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG 153
           Q D +     W           F          F     K     +        + V  G
Sbjct: 69  QADAIIAG--WEPTDRNREKFTFTRSYMRLPARFATTNAKSFTEPAAKATQDKPVGVITG 126

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-- 211
           T  E  L +YF        P+ +   + + AA +  + D    D  +L A   + +    
Sbjct: 127 TAHEELLKNYFPQAK----PVPYPNRDAMLAALKDGKIDTVFDDGMSLSAWLDSAEGSAC 182

Query: 212 ---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              ++   L      S L+ A+ + ++   +  +    A+  
Sbjct: 183 CTFTDGPYLAPQYLGSGLSIAVTRQNSALASAFNNALQALQQ 224


>gi|313202388|ref|YP_004041046.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Methylovorus sp. MP688]
 gi|312441704|gb|ADQ85810.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Methylovorus sp. MP688]
          Length = 1150

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 20/234 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           I+ L +L F++ S +A       +   L+   +     +    A+G+ +G+ +D  +   
Sbjct: 61  IMALALLGFSAISAHA-------QPQTLRVISDDNYPPYLFRDASGNLEGYQMDIWKRWE 113

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                   K++ +  +  +   AL +   D++      T  R+ +    F          
Sbjct: 114 QETG---IKVELIATHWDQAQQALLNGDADVI-DMMFRTPDRDAT--YDFSQPYANLPVA 167

Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              H    GI+S   L G  I VQAG      L       +   +  ++     +     
Sbjct: 168 IYSHASIPGIASAHDLRGFLIGVQAGDACIERLR-----ADSVTNFKLYPDYTSLIKGAL 222

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +   +  D             P++       + +     A+ +G T+   ++
Sbjct: 223 DEQVKLFCMDEYPANYYLYKL-DPTQKYRKAFQLYQGQFHYAVKKGATDTLQLI 275


>gi|239831139|ref|ZP_04679468.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823406|gb|EEQ94974.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 282

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 55/212 (25%), Gaps = 20/212 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---------------LGDIKKRGFLKCGINTGLV 45
           M +     ++ L        +  +                 L  ++    L+        
Sbjct: 1   MKRHLPRLLIALASACGIHSAQASDAEPQAPSFINQRERLPLPSLQALTRLRFITTVDFP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F  +   G   G+++D  +AL   +  D    Q   +   E    L S Q + +     
Sbjct: 61  PFNMLGDRGQLSGYNIDLAKALCRQLGVD-DLCQIEAVPWNELEERLLSGQAEAILAGWK 119

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
            T         +   +                  V+   G  + V AGT  E  L  YF 
Sbjct: 120 PTEANREQFAYSRSYMRLPARFATTNAGAFNDDPVTATKGKDVGVIAGTAHEQLLKSYFP 179

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
                     +     + +  R+ +      D
Sbjct: 180 ----DAVAKPYPDEPSMLSDLRSGKIGTVFHD 207


>gi|332096860|gb|EGJ01850.1| glutamate/aspartate periplasmic-binding protein domain protein
           [Shigella dysenteriae 155-74]
          Length = 127

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74
           +     S L  I K G +  G     V F+         G+  D+  A+  A+       
Sbjct: 25  AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVKAVKKKLNKP 84

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILS 101
             +++ +P+ ++ R   LQ+   D   
Sbjct: 85  DLQVKLIPITSQNRIPLLQNGTFDFEM 111


>gi|217966663|ref|YP_002352169.1| metal dependent phosphohydrolase [Dictyoglomus turgidum DSM 6724]
 gi|217335762|gb|ACK41555.1| metal dependent phosphohydrolase [Dictyoglomus turgidum DSM 6724]
          Length = 770

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 74/220 (33%), Gaps = 15/220 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           K+  L    +  L     + + G+ KGF VD    LS  I      I+   +  ++    
Sbjct: 22  KKESLTFAGDFNLPPIEYLDSQGNPKGFAVDIVNELSKKINK---TIEIKLVPWEKAVEL 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + ++D +      T  R+      F P         I+     I++   L    + V 
Sbjct: 79  LNTGKVDGIEF-MRITEERKK--RYDFVP-YLESFSVIIVPIGSPINNFMDLKKKKVGVF 134

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
                 + L D           I +E  +++         DA   +  A   L   N+  
Sbjct: 135 NLDVAHIFLKDI-------TQTIPYESSKDVLLGILRKDVDAGVINYYAAKWLITQNNWN 187

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            +  ILPD +  +    A+ +G   ++  +      ++ +
Sbjct: 188 DKLKILPDKLFTNYSGIALPKGSP-YFLTIKKAIDEIIKS 226


>gi|254000430|ref|YP_003052493.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Methylovorus sp. SIP3-4]
 gi|253987109|gb|ACT51966.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Methylovorus sp. SIP3-4]
          Length = 1150

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 20/234 (8%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           I+ L +L F++ S +A       +   L+   +     +    A+G+ +G+ +D  +   
Sbjct: 61  IMALALLGFSAISAHA-------QPQTLRVISDDNYPPYLFRDASGNLEGYQMDIWKRWE 113

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
                   K++ +  +  +   AL +   D++      T  R+ +    F          
Sbjct: 114 QETG---IKVELIATHWDQAQQALLNGDADVI-DMMFRTPDRDAT--YDFSQPYANLPVA 167

Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
              H    GI+S   L G  I VQAG      L       +   +  ++     +     
Sbjct: 168 IYSHASIPGIASAHDLRGFLIGVQAGDACIERLR-----ADSVTNFKLYPDYTSLIKGAL 222

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
             +   +  D             P++       + +     A+ +G T+   ++
Sbjct: 223 DEQVKLFCMDEYPANYYLYKL-DPTQKYRKAFQLYQGQFHYAVKKGATDTLQLI 275


>gi|157963030|ref|YP_001503064.1| extracellular solute-binding protein [Shewanella pealeana ATCC
           700345]
 gi|157848030|gb|ABV88529.1| extracellular solute-binding protein family 3 [Shewanella pealeana
           ATCC 700345]
          Length = 722

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 68/219 (31%), Gaps = 11/219 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +  I+ +G L+ G     V F+    +G+  GFD      L+  +      I +      
Sbjct: 471 VQAIRDKGTLRVGYIPSNVPFSYYNNSGNLVGFDTAMATKLAEDLKVKIEFIPFKK---D 527

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLS 144
           +   +L++   DI           E    L++                      S  ++ 
Sbjct: 528 QLAASLKAGFFDIAMSGLAM--DIEQMDALSYANPVLELNIAIATRDHLVNEFKSNEKIK 585

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
                  A       + D  K        +  E  ++     + H+ DA     SA    
Sbjct: 586 EMRNMTIAY-VEHSDVIDDAKHFAPHVKFVKIEGYKDFFRQ-KNHQYDAVVI--SAQAGS 641

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             T   P   + L +  S+ P+A A+ Q +    N ++ 
Sbjct: 642 AWTLFFPGYGIALLENKSRYPVAYAVAQNNQSLLNYINN 680


>gi|27378420|ref|NP_769949.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27351568|dbj|BAC48574.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 278

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 8/171 (4%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              ++   G L+  IN        V  +G  +G +V+    L   +      ++ + ++ 
Sbjct: 30  TDDNLIAPGKLQLSINPTNPPQQFVDKDGQLQGLNVELAAELGKRL---CLPVELVRMDF 86

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                A+ + +ID +     WT  R   +                      I++ + L G
Sbjct: 87  PAMIPAMAAGRIDGIDTGMFWTEERSKLM-YMVPYAIQAISVVVAPDSGTKIATENDLIG 145

Query: 146 ASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
            +  V+  T     L                   F     + +A  A + D
Sbjct: 146 KTSAVEVSTYQMNWLKKLSDASVAKGGAAVEMRTFPTATNVVSALLAGQVD 196


>gi|283455706|ref|YP_003360270.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|283102340|gb|ADB09446.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 443

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 83/268 (30%), Gaps = 35/268 (13%)

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D++  ++++     +  KI+           AL S Q+D++      T  R+ +  
Sbjct: 1   MVGIDMELIQSIAKK---EGFKIEIQASGFNAALQALSSNQVDLVIAGMSITDERKAT-- 55

Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             F    +  G    +      I S   L   ++  + G+  E    ++ K +       
Sbjct: 56  YDFSDPYFQSGIQMAVAADNDDIKSYKDLDDKTVVAKTGSEGEAYAKEHAKEYGY--TVT 113

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAII 231
             ++   +    ++    A   D   L            H  L  +  K P      A+ 
Sbjct: 114 SVDQSSTMYEMVKSGNAVAVFDDYPVLAYGVSQ------HNGLKIVTPKVPHGEYGMAVN 167

Query: 232 QG---------DTEWYNIVSWTHYAMVT-----AEELGITQKNINQVSKDTTNPDVQR-- 275
           +G         D     ++S   Y  +      AE      K I+ +  D       +  
Sbjct: 168 KGKNADLLAAIDDGLAQLISSGEYETIIAKYLGAEGAKAQVKAISGMVTDNDATATAKAK 227

Query: 276 --FLGIDKSSNIGEALGLTKDWTYRIIR 301
             FLG+ K S     +GL       +I 
Sbjct: 228 VGFLGLAKQSLPALMIGLKNTLFITVIS 255


>gi|220914443|ref|YP_002489752.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
 gi|219861321|gb|ACL41663.1| extracellular solute-binding protein family 3 [Arthrobacter
           chlorophenolicus A6]
          Length = 354

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 67/237 (28%), Gaps = 13/237 (5%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKI 78
            +  A +   I K G L      G +  +     +    G ++D  + ++  +     ++
Sbjct: 75  AALAAKVPELIGKDGKLTVATTAGSIPLSFHATDDKTPIGSELDIAQLVADKLG---LEL 131

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKG 136
                + +   L  QS   +++  N       +      F         GF         
Sbjct: 132 DVQVTSWENWPLKTQSGDFEVVFSNVGVNK--DRVKLFDFA-SYRAAFMGFEAKNSATYD 188

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCD 192
           I     +SG  + V +GT  E  L  + K    K         ++   +   A  + R D
Sbjct: 189 IKGADDISGLRVSVGSGTNQEKILLAWNKELEEKGKAPAALQYYQSEADTILALSSGRTD 248

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                  +    + T D       +        L  A          +++    + +
Sbjct: 249 LNIAPYPSTVYRENTRDDLKVVGKVNAGWPSETLVAATSLKGNGLAPVITEALNSAI 305


>gi|119383035|ref|YP_914091.1| extracellular solute-binding protein [Paracoccus denitrificans
           PD1222]
 gi|119372802|gb|ABL68395.1| hydroxyectoine-binding protein / ectoine-binding protein
           [Paracoccus denitrificans PD1222]
          Length = 281

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 82/258 (31%), Gaps = 13/258 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L  + L        A  L D++K+G+++  I      +  V ++G   G  
Sbjct: 9   MKKCLIAAALLAVPL-----PALADKLEDLQKQGYVRIAI-GNEPPYTAVASDGKVSGAA 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  RA+   +     +             +LQ+ ++D ++        R     +A+  
Sbjct: 63  PDVARAVFEKLGIKDLEASI--AEYGAMIPSLQAGRVDAITAGLFMKPER--CNAVAYSE 118

Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               D +  ++ K      +S + ++  +                  A   +   +V   
Sbjct: 119 PILCDAEALLVPKGNPKGFNSYADIANDASARLGAPGGGTEEKLALDAGVPRDRLVVVPD 178

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEW 237
            +      +  R DAY+  + +L  L   +   +  V  P   +       A  + DT  
Sbjct: 179 PQSGLKMVQDGRIDAYSLPVLSLNDLLAKSGDANLEVFAPVEGAPVYCDGAAFNKKDTAL 238

Query: 238 YNIVSWTHYAMVTAEELG 255
            +        +  + E  
Sbjct: 239 RDAFDVELAKLKESGEFA 256


>gi|212636849|ref|YP_002313374.1| sodium:dicarboxylate symporter family/extracellular solute-binding
           family 3 protein [Shewanella piezotolerans WP3]
 gi|212558333|gb|ACJ30787.1| Sodium:dicarboxylate symporter family/bacterial extracellular
           solute-binding family 3 protein [Shewanella
           piezotolerans WP3]
          Length = 725

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 78/230 (33%), Gaps = 8/230 (3%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
           ++  TS S  A  +  I+ RG L+ G     V F+    +G   GFD      L+  +  
Sbjct: 462 VIGTTSQSAIAG-ITQIRNRGVLRVGYIPSNVPFSYYNNSGRLVGFDTAMATKLAEDLNV 520

Query: 74  DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
               I +      +   AL +   DI           E    L++               
Sbjct: 521 KVEFIPFRK---NKLAQALDAGFFDIAMSGLAM--DIEQMDALSYADPVLELNLAIATK- 574

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
              + +  + +   + +   T   +  +D  +   ++   + F +++     +R  +   
Sbjct: 575 -DHLVNTFKSNKKILDMGPVTIAYVEHSDAVEDARLQAPNVKFVKIDGYKDFFRQKKNKY 633

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               ISA      T   P   + L +  S+ P+A A+ Q +    N V+ 
Sbjct: 634 DAVVISAQAGSAWTLFFPGYGIALLEGKSRYPVAYAVAQSNQSLLNYVNN 683


>gi|254248454|ref|ZP_04941774.1| Arginine 3rd transport system periplasmic binding protein
           [Burkholderia cenocepacia PC184]
 gi|124874955|gb|EAY64945.1| Arginine 3rd transport system periplasmic binding protein
           [Burkholderia cenocepacia PC184]
          Length = 275

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 15/205 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVD 62
             F ++    +      + +AS    +     LK G     V F  +   +   +G  VD
Sbjct: 23  KRFGALAAGFVTCVALSTASASG---VAAEPTLKVGATATGVPFTFLDVKSNSIQGMMVD 79

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+++A      ++            +L +++IDI+S     T  R     + F    
Sbjct: 80  ---AITAAGKSAGFRVDVQQTVFSALIPSLTTQKIDIISAAMLKTPAR--QQVVDFSDTV 134

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y  G+G I+        +S+       +  Q GT     L        +      ++ + 
Sbjct: 135 YSFGEGLIVKADDPGRYTSMDDFKDQVVGAQVGTAFVDALN----KKGIFKEVRTYDSIA 190

Query: 181 EIDAAYRAHRCDAYTGDISALYALK 205
           +I       R  A   D   +    
Sbjct: 191 DIMRDVALGRIKAGFADQPIVAYQI 215


>gi|302186711|ref|ZP_07263384.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae 642]
          Length = 290

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 24/264 (9%)

Query: 6   FVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           F ++    +L   + S    A +L   +  G L  GI      +A +  +G   G +V+ 
Sbjct: 9   FSALFGSALLLNAALSFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEI 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            RA+   +     +      +       L + + D++         R   +   F     
Sbjct: 67  LRAILEPLGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVT 122

Query: 124 FDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             G  FI+     ++      V+  +   +  Q G+       D   A+    + ++F++
Sbjct: 123 RSGGAFIVKTGNPLNLHSLKDVASNAKVRLATQPGSNQVQEAKDSGIAN---SNVVLFDK 179

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTN-----DRPSEHVILPDIISK---SPLAPAI 230
             E  AA +A R D      + + +L         +R      +PD   K   +  A  +
Sbjct: 180 DTEALAALQAGRVDVVYFPDAEVISLIKKANSADIERALPFEQIPDASGKPGWNYHAYGL 239

Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254
            + D  +    +     +  + EL
Sbjct: 240 PKNDPAFEQAFNEQLAKLRASGEL 263


>gi|148261726|ref|YP_001235853.1| extracellular solute-binding protein [Acidiphilium cryptum JF-5]
 gi|146403407|gb|ABQ31934.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidiphilium cryptum JF-5]
          Length = 276

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 68/204 (33%), Gaps = 11/204 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             +++  +       +  A+    I  RG L     T     + + A+G   GF V+F  
Sbjct: 10  LAAMVAGLAAGMAVPALAAAPPPTI-TRGVLTVAYRTDDKPVSFI-ADGKPTGFLVEFEE 67

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+++ +     K++++  +       +++   D  +  T  T  R+    +AF     + 
Sbjct: 68  AIAAKLG---LKVRFVATSFASMLPGVRNHIYDTAAFATLVTPARQK--AVAFTTPIGYG 122

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
               +      I  V   SG ++ +  G+     L               F  +     A
Sbjct: 123 QARLVSRSGAAIGKVDGASGKTVAITQGSALIPLLRHIAP----GVKVREFPNIAASLNA 178

Query: 186 YRAHRCDAYTGDISALYALKLTND 209
             A + +     ++   AL   + 
Sbjct: 179 LIAGQVNGLFTGLATANALVKKHP 202


>gi|227432590|ref|ZP_03914569.1| conserved hypothetical protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351650|gb|EEJ41897.1| conserved hypothetical protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 131

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 10/134 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59
           M+K  F+  + L++   +           I           +     F     N D+ G 
Sbjct: 1   MFKKGFILAVTLVVALLSFSMAA----DCIHADKPHYTISTDATYPPFDFQDKNNDYIGI 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D D  + ++     +       P++       + + Q D +      T  R+        
Sbjct: 57  DQDILKEIAKR---ENFTYTLKPMSFTSAAQLVANGQADGIIAGMAITDERKEV--YDNS 111

Query: 120 PITYFDGQGFIMHK 133
              Y  G  +I+ K
Sbjct: 112 TPYYKTGVAWIVKK 125


>gi|145219393|ref|YP_001130102.1| extracellular solute-binding protein [Prosthecochloris vibrioformis
           DSM 265]
 gi|145205557|gb|ABP36600.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chlorobium phaeovibrioides DSM 265]
          Length = 383

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 12/133 (9%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            +S++ + I+  T     ++     + R  L          FA  K NG+W+G  +D  R
Sbjct: 32  LLSLVAITIIMTTGTRDASA-----RAR-ELTVATKHS-PPFAMQKENGEWEGISIDLMR 84

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++         I ++P++  +   A+  +++DI +     T+ RE    L F    +  
Sbjct: 85  AIAKK---QDLGITFIPMSLPDMIEAVAVRRVDIAAAALTMTVEREE--QLDFSHPYFQS 139

Query: 126 GQGFIMHKKKGIS 138
           G    + +K    
Sbjct: 140 GLAIAVREKDDGW 152


>gi|126654466|ref|ZP_01726198.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           sp. B14905]
 gi|126589072|gb|EAZ83289.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           sp. B14905]
          Length = 185

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 5/166 (3%)

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           + P++ K +   L S +ID++      T  R+    + F      + Q  +      I  
Sbjct: 1   FQPIDWKTKEAELLSGRIDLIWNGYTITDERKE--KVLFTKPYLENSQVVMTKADSKIIK 58

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           ++ L+G  + +Q+ ++    L      H        F       +  +  R D     I 
Sbjct: 59  LNDLAGKEVGIQSLSSAADALN-GNPIHKEVKTITEFSDNVLALSDLKTGRVD--AVVID 115

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           A+ A       P    +L + ++       +  G+      +    
Sbjct: 116 AVVAEYYMTQEPDTFKLLEESLAPEQYGIGVKPGNEALLEKLQAAL 161


>gi|148548297|ref|YP_001268399.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148512355|gb|ABQ79215.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
 gi|298682203|gb|ADI95270.1| PedG [Pseudomonas putida]
          Length = 291

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 80/277 (28%), Gaps = 41/277 (14%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             +  +L  ++L   +          I   G LK  +      ++    +G  +G DV+ 
Sbjct: 2   RLWAVLLSGLLLCCAAAQAQVRNYDAIIAAGELKVAVYKDFAPYSFQD-HGQPRGVDVEL 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN------------TDWTLLR- 110
            +AL++A+      I             L     D + R                   R 
Sbjct: 61  AQALATALGVRLQLI------WAPPGEKLDDDLRDYIWRGSPLRHQQLADLMMRVPYDRA 114

Query: 111 -----------EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTEL 158
                      E +  + F P      Q     ++   ++SV+      I V+  +    
Sbjct: 115 YAQRRNELGELENAQVVMFGPYQQERWQVAYDRRRLASVASVAVFQQHPIGVEVDSVPSF 174

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS------ 212
            L   F    +      +  V++  AA +A + DA       +         P       
Sbjct: 175 YLTSVFN-GMLSARTHHYPSVQQAFAAMQAGQVDAVMAMRGEVDWQLHQAADPQLALAEN 233

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +  L     +  +  A+ + + +    V     AM+
Sbjct: 234 AYPNLGKQAWE--IGMAVHESNRQLAYAVEEAMEAMI 268


>gi|307824411|ref|ZP_07654636.1| diguanylate cyclase with PAS/PAC sensor [Methylobacter
           tundripaludum SV96]
 gi|307734395|gb|EFO05247.1| diguanylate cyclase with PAS/PAC sensor [Methylobacter
           tundripaludum SV96]
          Length = 669

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 83/293 (28%), Gaps = 36/293 (12%)

Query: 9   ILCLIILFFTSFSTNASILG---------------DIKKR------GFLKCGINTGLVGF 47
           ++ L    F      A                    +K+R        ++   +  L  +
Sbjct: 30  LVSLFFFIFFVNVAAADDFDAKVSSQNKVDPVVQLTVKERAWLANHKKIRIAFDGSLPPY 89

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           + +  +G  +G  ++    LS  +    +   Y   +  + + A  + ++D+++      
Sbjct: 90  SFINDSGQLEGIAIEVMNTLSKRLG--ITFETYPNTSWNKLYEAAAAHKVDVVA---TMV 144

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKA 166
              +      F           +  +    I + S L G ++ +  G      +     +
Sbjct: 145 NRPDRRQLFIFTQPYLIKSLVIMTKRDNTTIKNQSDLVGKTVTMVKGYQFVDRVIKELPS 204

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT--NDRPSEHVILPDIISKS 224
                 P     + +   A    + DA    ++    L+                  +  
Sbjct: 205 ----VTPYFVVSMLDGLKAVSTEKADAAITFMATASYLQTKYLLTDLKIAAFYDLNSANE 260

Query: 225 PL--APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
            +  + A+        +I+       ++ EE+           K + + ++ R
Sbjct: 261 SINESIAVRNDWPVLADILRKAL-VTISEEEMQNIHAKWVPSIKPSIDYELIR 312


>gi|27379574|ref|NP_771103.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27352726|dbj|BAC49728.1| blr4463 [Bradyrhizobium japonicum USDA 110]
          Length = 309

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 68/230 (29%), Gaps = 21/230 (9%)

Query: 34  GFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             L   IN    G+  +       + GFD+D   A+   +     K+ Y P+        
Sbjct: 65  KTLVNAINPHTPGYETIDPKDPSKYIGFDIDLGEAIGECLG---FKLTYKPVVFAALLTT 121

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + Q DI+  +   T  R       F         G ++ K                  
Sbjct: 122 LAAGQADIVISDIYATKERAK--AADFI-TYSKVFDGVLVAKGNPKGINGINMSMCGAAA 178

Query: 152 AGTTT-------ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           A  T        +  + +  KA   +    +++       A  A R D Y  D++ + + 
Sbjct: 179 AENTGYVEVPLIQALIPECKKAGKAEPTIQLYDNNANCIQAILAGRADTYVNDVNTVDSA 238

Query: 205 KLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYNIVSWTHYAMVTAE 252
                   E  I   I    P     A+ +   ++ + V      +  A 
Sbjct: 239 VKAYPDKLEKAIAVTI----PYSVGIAVPKDKPKFRDAVLAALIEVQKAG 284


>gi|222106294|ref|YP_002547085.1| ABC transporter substrate binding protein [Agrobacterium vitis S4]
 gi|221737473|gb|ACM38369.1| ABC transporter substrate binding protein [Agrobacterium vitis S4]
          Length = 312

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 77/250 (30%), Gaps = 18/250 (7%)

Query: 34  GFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     ++                 G D D  + L+ ++     +++ +P+   +  L +
Sbjct: 61  GKFTVAVSPFDPPVVTYASDAKTILGADPDLAQLLADSLG---LELEIVPVAWADWPLGI 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F      D  GF + K   I+       ++G  + 
Sbjct: 118 ASGKYDAVISNVTVTEQRKE--KYDFS-TYRRDLLGFYVAKNSPITDIKEPKDVAGLKLI 174

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYAL 204
             +GT  E  + D+ + +            +E     D A ++ R D  +  + S  Y  
Sbjct: 175 TSSGTNQEKIILDWDRQNVAAGLKPIEVQYYEDSAASDLALQSGRADVRFNTNASQAYGS 234

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQG---DTEWYNIVSWTHYAMVTAEELGITQKNI 261
            +  +      +       + +A    +            +        AE L       
Sbjct: 235 LIKGNTRLVGNVNGGWPLTADIATVTRKDAGLADALTIATNALIKDGKYAEVLKRWNLTA 294

Query: 262 NQVSKDTTNP 271
             + +  TNP
Sbjct: 295 EAIPESRTNP 304


>gi|242240715|ref|YP_002988896.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242132772|gb|ACS87074.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 273

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 87/287 (30%), Gaps = 31/287 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     ++C + L     +  A  L    + G L  G +     +  ++ N    GFD +
Sbjct: 2   KTILKGLICSLPLLLLPLTGQARTL----QPGVLTIGSDLTYPPYNYLQ-NNQPAGFDAE 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               + + +   P              L +++ + D+++     T  R   +        
Sbjct: 57  LMALIGAPLKLKPEV---KDTRFASLILGIKASKFDVVASTLYVTPERAAQVSFL---PY 110

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKY-HPIV 175
              G  F++         +  +L G  +    G      L     DY K H         
Sbjct: 111 MKTGGAFLVLTHSAFTPKTPEELCGKRVSSIKGGAWIARLNKVSTDYCKPHGQGPITVQE 170

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F    E   A  +   D    + +A+    +        +    I+    +  A+ + + 
Sbjct: 171 FPTSPEATQALMSGAVD-VQYEDAAVAKSSVEKTGGKLKISTTSIVYPVVVGLAVSKDNP 229

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD-----TTNPDVQRFL 277
           E    +         A E  I+  +  Q+ K        + +V++ L
Sbjct: 230 ELLADLKK-------AFEQKISDGSYEQLLKKYNVQMPDDQEVEKAL 269


>gi|229591694|ref|YP_002873813.1| putative glutamine-binding periplasmic protein [Pseudomonas
           fluorescens SBW25]
 gi|229363560|emb|CAY50836.1| putative glutamine-binding periplasmic protein precursor
           [Pseudomonas fluorescens SBW25]
          Length = 276

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 17/216 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            K      +CL+       S  AS     ++ G +  G +     +  +  N    GFD+
Sbjct: 5   RKSVRPLAVCLLGAAVAMTSLAASAF---QQDGKIIAGSDVTFFPYEYMD-NNKPAGFDI 60

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +F   L   +      ++ L          LQ+ + D+ + +   T  R   + +     
Sbjct: 61  EFMDGLGKVMGRK---VETLDTRFPNLITGLQAGRFDVTNSSMYITAERVKVIDMI---P 114

Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTL----ADYFKAHNMKY-HPI 174
               G+  +  K       +  +  G  I     T+    +    A+Y  A  +K     
Sbjct: 115 YLKSGESILTLKDSTFQPKTPEEFCGHKIGSMGATSWLAQMNKLSAEYCVAKGLKPIQIS 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            +    +   A  AH  +A   D +    +      
Sbjct: 175 EYSTDPQTTQALLAHAVEAQITDAAVARGVIDKLGN 210


>gi|77407243|ref|ZP_00784204.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae H36B]
 gi|77174149|gb|EAO77057.1| amino acid ABC transporter, amino acid-binding protein
           [Streptococcus agalactiae H36B]
          Length = 167

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 7/151 (4%)

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           DIL      T  R+ +  +      Y D  GF++ K   I ++ +L G  I V  G TT+
Sbjct: 1   DILIATYTITPERKANYNI--SKAYYHDEIGFLVRKNSHIXTIKELDGKHIGVAQGATTK 58

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           + L  Y K H +K+         E+  +  A+R DA++ D S L              IL
Sbjct: 59  VNLEKYAKEHKLKFSYAQLGSFPELAISLYANRIDAFSVDKSILSGYLS-----PHTTIL 113

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            +  +      A  + D      V+    + 
Sbjct: 114 KEGFNTQEYGIATSKQDKVLIPYVNKLLVSW 144


>gi|171320113|ref|ZP_02909179.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171094651|gb|EDT39699.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 313

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      ++ +P+   +  L L
Sbjct: 64  GVFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALG---RTLRLVPIAWADWPLGL 120

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+       ++G  I 
Sbjct: 121 TSGKYDAVISNVGVTEQRKE--KYDFT-TYRLGLHGFYVRNASPIARIAEPKDIAGLRII 177

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +  +       + F+       A  + R DA     ++L    
Sbjct: 178 TGAGTSQERILLEWSRRNVAQGAKATELLYFDDDAAARVALLSGRADAELNPNASLAYEA 237

Query: 206 LTNDR 210
             + +
Sbjct: 238 ARDGK 242


>gi|194365478|ref|YP_002028088.1| family 3 extracellular solute-binding protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194348282|gb|ACF51405.1| extracellular solute-binding protein family 3 [Stenotrophomonas
           maltophilia R551-3]
          Length = 324

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 86/279 (30%), Gaps = 30/279 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKR-----------GFLKCGINTGLVGFAEVKANGD 55
            S++    L   + +     L    +            G      + G +  A+  A+  
Sbjct: 38  ASVVAATSLAGANTALLKGTLDPKAQALIPAGYRFVTPGAFTIATHPGQLPLADYGADSK 97

Query: 56  -WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              G + D  R ++  +     K+  +P+   +  L L+S + D +  N   T  R+   
Sbjct: 98  DVVGVEPDIARLIADGLG---LKLVVVPVAWADWPLGLESGKYDAVLSNVTVTEERKK-- 152

Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMK 170
              F     +D  G         + I   + ++G  + V A T  +  L  + + +    
Sbjct: 153 KFDFS-SYRYDLLGIYTRSDGPIQKIEKPADVAGLKVVVGASTNQDQILRQWDQQNIAAG 211

Query: 171 YHPIVFERVEEIDA---AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             P+ ++  ++      A    R D                D     V L      +  A
Sbjct: 212 LKPVEYQYFDDAVVGRLAVITGRAD--VSFEPNATGAYSARDGKVRRVGLFPGGWPNAAA 269

Query: 228 PAIIQGDTE-WYNIVSWTHYAMVTAEEL--GITQKNINQ 263
            ++         + V+      +++      + + N+ +
Sbjct: 270 ISVTTRKGSGLADAVTQALNTQISSGTYAQALARWNVAE 308


>gi|89094119|ref|ZP_01167062.1| periplasmic binding domain/transglycosylase SLT domain fusion
           protein [Oceanospirillum sp. MED92]
 gi|89081594|gb|EAR60823.1| periplasmic binding domain/transglycosylase SLT domain fusion
           protein [Oceanospirillum sp. MED92]
          Length = 492

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 63/232 (27%), Gaps = 18/232 (7%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I + G LK                G+  GF+ +  +A +  +  +   +   P    
Sbjct: 34  LDGIVESGSLKFVTRNS--PNTYFIDKGEPAGFEYELAKAYADYLNVNLKLVL--PDTFG 89

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--- 143
             F  + +++  +       T  R       F P         I  K +G+     L   
Sbjct: 90  SIFPTILNRKGHLAGAMLTATSER--QQTFEFTPPYLHTTTAVIYRKIQGVPGPKNLEDL 147

Query: 144 --SGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                 + V A ++    L      H ++ +         E+         D    D  A
Sbjct: 148 IKKDKKLVVIANSSHVELLKKLKDTHPDLNWEETNEHTAVELLERVHNKEIDYTITDAIA 207

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             + K      ++   L       PLA      + +       +    +  E
Sbjct: 208 FDSQKSFFPGLTKAFDLDKPQ---PLAWMFAPNEDQSL---KTSLNDFMALE 253


>gi|219683756|ref|YP_002470139.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|219621406|gb|ACL29563.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
          Length = 296

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 75/276 (27%), Gaps = 30/276 (10%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             +   + +      T+ ++    + +G  +  G+     G      +G++ G  V+  +
Sbjct: 11  AILTISLAVGLCGCGTSVNVSAPGQAKGPVMSIGVPADEPGVGWY-HDGEYSGLSVEVAK 69

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN-----------TDWTLLREISL 114
            ++  +     ++ +       R   L    +D                 D T   +   
Sbjct: 70  YVAKVLGYGDEQLFFHSQTPATRLDRLDDGSVDFAMVTFAYDGGKNALEMDHTQTADG-T 128

Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                          ++       +  V  L G ++C  AG  +   L D     + +  
Sbjct: 129 RYEVSGPYLVARNQLLVRADDARRLPDVQSLDGRTVCTVAGEYSGEQLHD----RHPRIK 184

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +      E  A+    + DA  G    L  L+        H+   D         A+  
Sbjct: 185 ILQRADYSECSASLLVGQSDAIAGPQPILAGLRKDGGTRYLHLQ-EDSYGTQAFGIAVKA 243

Query: 233 GDTEWYNIVSWTHY---------AMVTAEELGITQK 259
              +   ++              A + A E  +   
Sbjct: 244 DQRKLMELIDTALQQMVDDGAWDAQIDAMETELGMH 279


>gi|121608289|ref|YP_996096.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121552929|gb|ABM57078.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 303

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 12/183 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G +     +A  +A G   GFD DF R L++ +   P    ++     +  L L+
Sbjct: 58  GRLTVGSDLTYPPYAFFEA-GKPAGFDADFARLLAAKLSLQP---VFVDTRFPDLILGLR 113

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152
           + + DI++     T  R     + F           +         +   L G  +    
Sbjct: 114 AHRFDIVASALYMTPERAKL--IDFIAYLKTGAALLVPAASSDAPATPQALCGKRVASIK 171

Query: 153 GTTTELTLADYFKAHNMKY-----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           G +    L    +             + F    E   A R+   DA   D +  +A+   
Sbjct: 172 GASWTPKLHKVTRELCQPTGRRAIEVLEFPSSPEALMALRSQAADAMMEDAAVAHAMLAQ 231

Query: 208 NDR 210
            + 
Sbjct: 232 TNN 234


>gi|126733842|ref|ZP_01749589.1| amino acid ABC transporter, periplasmic-binding protein, putative
           [Roseobacter sp. CCS2]
 gi|126716708|gb|EBA13572.1| amino acid ABC transporter, periplasmic-binding protein, putative
           [Roseobacter sp. CCS2]
          Length = 272

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 78/261 (29%), Gaps = 13/261 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M K   ++ + L +    +F+            G L     N     +    A    +GF
Sbjct: 1   MAKTLSLAAMTLALTTSAAFAAGHCAADKTLTEGKLTIATGNPAYYPWVLDDAPESGEGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLA 117
           +     A++  +      + ++  +      A+Q      D+  +    +  R+  +  +
Sbjct: 61  EAAVAYAVAGEMGFAAEDVVWVRSSFD---EAIQPGAKNFDVNIQQYSISAARDEIVDFS 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               T         +      ++  L          TT    LA+          P+++ 
Sbjct: 118 MPYYTAPMAVLVSPNATDTEPTLDALRDLKWGAMGSTTAVPKLANVI---QPTSDPLLYG 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN---DRPSEHVILPDIISKSPLAPAIIQGD 234
              +++AA  A++ DA   D+     L        +           +       + +G+
Sbjct: 175 DNADVNAAMSANQIDAALFDLPTALFLSAVMIEGSKVIGQFAPDASDNPDQFGMLMEEGN 234

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
               + V     A+  + EL 
Sbjct: 235 P-LKSCVDDALVALTESGELA 254


>gi|297198907|ref|ZP_06916304.1| amino acid ABC transporter [Streptomyces sviceus ATCC 29083]
 gi|297147234|gb|EDY55206.2| amino acid ABC transporter [Streptomyces sviceus ATCC 29083]
          Length = 314

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 11/191 (5%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
               T  +     L   K  G L    +      + +       KGF+     A++  + 
Sbjct: 58  ASGSTGTTCAKGELAT-KTSGKLTVATDEPAYEPWFKDDKPASGKGFESAVAYAVAKQLG 116

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-- 130
            D + + +  +   + F A   K  D        +  R+    + F    Y   Q  I  
Sbjct: 117 YDKNAVVWQSVPFNKAF-APGEKTFDFDINQVSISAERKK--AVDFSSGYYDVRQAVIAL 173

Query: 131 -MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              K    +S++ L G  +  Q GTT+   + D  K  +       + + ++  +A +  
Sbjct: 174 KGTKAAKATSIADLKGLKLGAQVGTTSLNYIEDVVKPTH---EAAAYAKNDQAKSALQNG 230

Query: 190 RCDAYTGDISA 200
           + DA   D+  
Sbjct: 231 QVDAIVVDLPT 241


>gi|289208911|ref|YP_003460977.1| diguanylate cyclase with PAS/PAC and GAF sensors [Thioalkalivibrio
           sp. K90mix]
 gi|288944542|gb|ADC72241.1| diguanylate cyclase with PAS/PAC and GAF sensors [Thioalkalivibrio
           sp. K90mix]
          Length = 896

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 77/239 (32%), Gaps = 16/239 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
             +  + +L        A      +    L    +     FA     G+ +G  VD  + 
Sbjct: 8   AGLSAIGVLLLCCTGVQAD-----EPPPPLIVSQDHAWPPFAFEDNGGEPRGLLVDLWQE 62

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +++ +      +++  ++       ++  + D+           E    LAF  +     
Sbjct: 63  IANEL---DRPVEFRLVDWPRTLDLVRGGEADVHGGLI---QSPEREQTLAFSEVLLPLR 116

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
               +     ++ + +L+     V AG+     +      H       VF+  E++  A 
Sbjct: 117 TFAFVRTGAPVARLDELAHKPAGVVAGSFELEFMRRERPEH----PLQVFDNNEQMVRAA 172

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                D + GD      L   +  P     L +++ + PL  A+   + E  + ++   
Sbjct: 173 LEGTIDVFVGDYPVAMYLLDRHGEPGMFHPL-ELLYEQPLRAAVTHANEELLDEINTAI 230


>gi|326388275|ref|ZP_08209878.1| extracellular solute-binding protein family 3 [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207441|gb|EGD58255.1| extracellular solute-binding protein family 3 [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 298

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 84/273 (30%), Gaps = 36/273 (13%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               + C+  L            G    R  L  G       +   + +G   GF+ D+ 
Sbjct: 6   IRAGLACVAALATAVLGGCRDEEGKGADR-VLVVGTEGLYPPWNYTRPDGQLAGFEPDYV 64

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R L + +     + + + ++      ALQ+ +ID+++ +   T  R   LG  F      
Sbjct: 65  RILCARL---HRRCRMVAMDWDGMVGALQTGKIDLIADSVQVTPERSQVLG--FTRPYAM 119

Query: 125 DGQGFIMHKKKGISSVSQ------------------------LSGASICVQAGTTTELTL 160
               F+  +   ++ ++                         L+G  I V+     +  L
Sbjct: 120 TTGVFVTLRDHRLAGMADKGAMMDFDRPGPALTAMTGRLKGSLAGKVIGVEISGAFDNFL 179

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
                          +  + E D      R DA   D + +  L  T D  +  +  P +
Sbjct: 180 NQTL---GSGASIRYYHTMGERDLDLLNGRIDATLEDEAYMRPLLATRDGAALTMAGPRV 236

Query: 221 ISKSP---LAPAIIQGDTEWYNIVSWTHYAMVT 250
           I  +     A A   GDT   +       A + 
Sbjct: 237 IGGAMGGGEALAFRPGDTALRSAFDGAIAATIA 269


>gi|312128780|ref|YP_003993654.1| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311778799|gb|ADQ08285.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 1016

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 20/245 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K     +  L++LF  S +  +           +K  ++     F+   ++G   GF +D
Sbjct: 5   KAILFVLTVLLMLFHISPAYASHTP--------VKFEVDKSYPPFSYT-SDGRIYGFAID 55

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +  A   D  K++       + +  L   +ID+ +      ++ E    + F    
Sbjct: 56  LANLVFEA---DKFKLELSSDTWNQVYKKLAEGKIDVTAP---VAIVEERKKEVYFSKPI 109

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +    G    K      S+  L    + V     TE  L +    +        +  +E+
Sbjct: 110 FTRHVGIYTPKGFSKNISLKNLESFKVGVMKSDYTETLLKEKLGINKY----YTYPTIED 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  A    + DA            + ND      +    I     A A+ +   E    +
Sbjct: 166 LIYALVDGKIDAALMSQEVANYFLVKNDLSDRAELKIKNIFTVKSAFAVSKKRPELVLYI 225

Query: 242 SWTHY 246
           +    
Sbjct: 226 NQRLN 230


>gi|37676725|ref|NP_937121.1| GGDEF family protein [Vibrio vulnificus YJ016]
 gi|37201268|dbj|BAC97091.1| GGDEF family protein [Vibrio vulnificus YJ016]
          Length = 457

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 87/250 (34%), Gaps = 24/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++  +I  F+SF     ++ + ++R  L+   +     F+ +  +G  +G  
Sbjct: 2   MKKSAILLLVFSLIGLFSSF-----VIAEEQERKTLRVTNSKAWKPFSYLAEDGSPRGIL 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +        D   I+++ ++  +   A++  + D+      W+  RE  L   F  
Sbjct: 57  IDLWKLYGEQNGVD---IEFVLVDWNDSLTAVEEGKADVH-AGMLWSEPRE--LRFDFAE 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQL----SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                     + ++   + ++          + V  G   E  +  +F         + F
Sbjct: 111 PIMTINTQLYLSQRIITTDLNFFLTGDGNRGVGVVEGGYEEYFVQTHFPK----LPLVRF 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-----PSEHVILPDIISKSPLAPAII 231
           +    +  A      DA+  D+        T  +     P+ ++   +I        A++
Sbjct: 167 KNNRLMMEAAFREEIDAFVADLQVANFYIYTTAQTVTFIPALYLYSGEIRPAVAEGSALL 226

Query: 232 QGDTEWYNIV 241
                 + +V
Sbjct: 227 STINAGFKVV 236


>gi|89092854|ref|ZP_01165806.1| hypothetical protein MED92_10349 [Oceanospirillum sp. MED92]
 gi|89082879|gb|EAR62099.1| hypothetical protein MED92_10349 [Oceanospirillum sp. MED92]
          Length = 304

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 80/290 (27%), Gaps = 42/290 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++       +S    A    D+   G++K G       ++ +   G  +G D
Sbjct: 1   MNKQLKTAVVITCASLLSSL-AQARYYDDVIDSGYIKVGFYKDFPPYSYM-EEGRPRGVD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI----------------DILSRNT 104
           V+  + ++         + +     +     L++                   +I     
Sbjct: 59  VEIGQHIAKEFGVK--FVPHWITPDENLEDDLRNNVWKGHYLDKNEANPLALKNIADVMM 116

Query: 105 DWTLLREISLGLAFRPI-----------TYFDGQGFIM--HKKKGISSVSQLSGASICVQ 151
                RE S                      +    I   +K   +S+++      I V+
Sbjct: 117 RVPYDREYSYMRDSTGYVINDMVVMFGPYQRESWQVIYDNNKLDNVSTLAVFQYHPIGVE 176

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             +     L   F    M+     F    E   A +  + DA     + +  L       
Sbjct: 177 IDSLPAFYLTSAFGGR-MRDKTHHFPNAREAYTAMKQGKVDAIMAMRAEVDWLAHKQPDK 235

Query: 212 SE------HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   +  +        +  AI     +  + V+     MVT+ E+ 
Sbjct: 236 KFTLATNGYPTMGKQKWD--IGMAIKHTYRQLGHSVADVVDRMVTSGEME 283


>gi|288960258|ref|YP_003450598.1| extracellular solute-binding protein [Azospirillum sp. B510]
 gi|288912566|dbj|BAI74054.1| extracellular solute-binding protein [Azospirillum sp. B510]
          Length = 302

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 77/247 (31%), Gaps = 14/247 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                +++A  L ++ +RG L+  +      F+    +G   G DVD  RA++  +   P
Sbjct: 36  LTVPTASSARPLDEVMERGRLRVAVYRDFPPFSFQ-RDGRLVGIDVDLARAIAEKLGVKP 94

Query: 76  SKIQYLP--LNAKERFLALQSKQ-IDILSRNTDWTLLREISLGLAFR-----PITYFDGQ 127
              + +P    + +  +A+           +    +  +   GL           + +  
Sbjct: 95  DIYEQIPGETVSDDLRVAVWRGSLFGGELADIMMHIPYDKRFGLMNPEAVLFGPYHQEVF 154

Query: 128 GFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                 ++   + ++ L    I V+  +  +  L             I     E      
Sbjct: 155 ALARDPQRVRSAVLATLPDEPIAVEIDSVPDFFLLSLQGGRLRG-RIIHCPTPEAAIGKL 213

Query: 187 RAHRCDAYTGDISALYALK--LTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSW 243
            +    A    +S + A         P   V LP +++ +  +  A  +   +    V  
Sbjct: 214 TSGEAAAVLAPLSQVQAALGPQAERFPVTTVALPGMMTSNWSIGMATKENSRDLAYSVGD 273

Query: 244 THYAMVT 250
              A+  
Sbjct: 274 AVAALTE 280


>gi|148253985|ref|YP_001238570.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146406158|gb|ABQ34664.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 313

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 71/236 (30%), Gaps = 17/236 (7%)

Query: 30  IKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           +K+R  L  GI     L   A         G + D  + ++ ++      +     +   
Sbjct: 59  VKER-TLTVGIAATNLLPLGAYASDTRTVVGNEADIAQIVADSLGLKLELVPIAWADWPL 117

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKKGISSVSQL 143
               L S + D +  N   T  R+      F      D  GF +     K K I+    +
Sbjct: 118 ---GLVSGRFDAVISNVTVTEARKE--KFDFS-TYRQDVLGFYVKSDNDKIKSIAEPKDV 171

Query: 144 SGASICVQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +G  + V +GT+ E  L ++ K +            ++       A ++ R D Y    +
Sbjct: 172 AGLKVIVSSGTSQEQILLNWLKQNKDAGLPPTDLQYYDDGAVRSLALQSGRADTYLTPNA 231

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                     +      +            + +  +     V+    A + +    
Sbjct: 232 FEAFNAAQTGKTRLVGTVKGGWPLDAEIAVVTRKGSGLAEAVTVALNAQIKSGTYA 287


>gi|148994411|ref|ZP_01823634.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae SP9-BS68]
 gi|147927247|gb|EDK78281.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae SP9-BS68]
 gi|332074502|gb|EGI84978.1| putative amino-acid transporter periplasmic solute-binding protein
           [Streptococcus pneumoniae GA17570]
          Length = 182

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 8/152 (5%)

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S ++DI   N   T  R+    + F         G +  K   I+ V QL G ++ V 
Sbjct: 1   MISNKVDITLANFTVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVT 58

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT E      F+ ++ +     +++  +   A    R DA++ D + + A     +  
Sbjct: 59  KGTTAETY----FEKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENK 112

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              V +  +     +A A+ + + E  + ++ 
Sbjct: 113 GFEVGITSLGDPDTIAAAVQKDNQELLDFINK 144


>gi|209524466|ref|ZP_03273015.1| diguanylate cyclase [Arthrospira maxima CS-328]
 gi|209495257|gb|EDZ95563.1| diguanylate cyclase [Arthrospira maxima CS-328]
          Length = 724

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 23/275 (8%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I+    ++    +    +  V  NG+  GF  ++ + ++  +  +   +  +     E  
Sbjct: 51  IQANPVIRVHGESDWPPYNFV-KNGNPTGFSNEYIKMIAEKVGLEVELV--VGPTWSECM 107

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L  K+ID+++ N   T  R      + + +             +  + + QL G ++ 
Sbjct: 108 TMLAQKEIDVVT-NMVITPDRHKFALYSEQYVFDLVNSLLTRKDGEDYTEIKQLKGKNLA 166

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN- 208
           +  G   E  L  Y+       + ++     +      A R DA     +          
Sbjct: 167 IVRGFFFEEILTKYYPE----INLLLTNNTLDAMKQVEAGRADAALESHATFNYYIERYF 222

Query: 209 -----DRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
                 RP   H  L ++    P    I        +I+     A+  +EE         
Sbjct: 223 LTELISRPLINHPHLSNV----PQYLGIRNDRPILKSILDKAMAAV--SEEDYANLLRRW 276

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGE-ALGLTKDWT 296
            ++ DT + +  R   ++   + GE  + +  +W 
Sbjct: 277 YLAADTASFNFTR-TELEYLQDKGEIKMCVDPNWM 310


>gi|146328930|ref|YP_001209730.1| extracellular solute-binding family protein [Dichelobacter nodosus
           VCS1703A]
 gi|146232400|gb|ABQ13378.1| bacterial extracellular solute-binding family protein
           [Dichelobacter nodosus VCS1703A]
          Length = 246

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 19/210 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+  F  S L + ++   + + NA           L  GIN     ++    +G+  GF+
Sbjct: 1   MF-LFKKSSLAIALVMGMATAANAET---------LTMGINYLAAPYSYQDESGNLTGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  +A+      D   ++  P+        L+  + D +      T  R     +    
Sbjct: 51  IELIQAIGKEAGFD---VKIEPIMFSRTLPGLEKGEFDFVGHVYG-TEERSQLYNMI--- 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             + DG  FI  KK  +  +S      + V + +  +  L    K           +   
Sbjct: 104 HIHDDGFKFIRLKKSDMEPIS--ENTKVSVISLSPQDEQLQAVKKLKYPNLEIAALDTNF 161

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                    + +     IS +  L  +   
Sbjct: 162 LALKNLFMDKSEVMLAPISEINYLVKSYKD 191


>gi|99080304|ref|YP_612458.1| extracellular solute-binding protein [Ruegeria sp. TM1040]
 gi|99036584|gb|ABF63196.1| extracellular solute-binding protein family 3 [Ruegeria sp. TM1040]
          Length = 263

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 74/254 (29%), Gaps = 18/254 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M + F ++ L   +    + + +   L        +             +  N G+  G+
Sbjct: 1   MTRTFALTALATAVFATGALAADLPDLEG----REVVFATENTYPPLQFIDPNSGEAIGW 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D    ++  I      + Y   +      A+ + Q D+           +    + F 
Sbjct: 57  EYDAVAEIAKRI---NITVVYENSSWDAMIPAITASQYDVAMNGITI--RDDRKEKVDFS 111

Query: 120 PITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPI 174
                     I+     + +  +  +         Q GTT   +T+ D            
Sbjct: 112 ESYLTSQMRMIVAGDEDRFEDAAGFAADDDLLAAAQPGTTPFYVTVYDVLDGDEANPRIK 171

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
           +FE       A RA   D    D +A   +   +D      I+ + +          +G 
Sbjct: 172 LFETFGASLQALRAGDVDLALSDSTAASGVVAASD--GALKIVGEPLGTEDFGFIFPKG- 228

Query: 235 TEWYNIVSWTHYAM 248
           ++    V+    AM
Sbjct: 229 SDLVEPVNAALAAM 242


>gi|327393250|dbj|BAK10672.1| nopaline-binding periplasmic protein precursor NocT [Pantoea
           ananatis AJ13355]
          Length = 282

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 67/246 (27%), Gaps = 32/246 (13%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
             K+   +          +      G   GF+ +    L   +     + + +  N    
Sbjct: 27  QAKEWKSITIATEGSYEPWNLTLPGGKLGGFEPELMANLCKRMG---MECKLVVQNWDGM 83

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS--------- 139
              L + + D++      T  R+    ++F          FI  K   +           
Sbjct: 84  IAGLNAGKYDVIMDAIVITPERKKV--VSFTLPYASTPATFIAVKGTLLPPGKGVTKLHD 141

Query: 140 ------------VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                        + L G +I + +GT     +  YFK          +    +     +
Sbjct: 142 DEKEIEAALAPIKAALKGKTIGIASGTVYTPFIDKYFK---GVADIREYTTSADAILDLQ 198

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           A R DA   D++   ++    D  +       L   +     A  +   D +    +   
Sbjct: 199 AGRIDAVFDDVTFAKSMLTRKDNSNLAFSGPQLGGPLWGEGEAMGVRMADGDLKAKLDDA 258

Query: 245 HYAMVT 250
             A + 
Sbjct: 259 IKAALA 264


>gi|298294042|ref|YP_003695981.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296930553|gb|ADH91362.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 284

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 73/229 (31%), Gaps = 28/229 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFS------------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M K    ++   ++                        L   K  G    G +     ++
Sbjct: 1   MLKSVLAALFVAVVSTGAVAQEFQFEAPPLFDNCGDPSLAKAKTEGV-TLGFSPS-PPYS 58

Query: 49  EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
            +        G DV+   A         +K +Y  +   +   AL +K+ID+++ N   T
Sbjct: 59  SLDPATKQATGLDVELVEAALKWAGV--TKFKYEVMPFGQLIPALLAKRIDVVAANIHVT 116

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFK 165
              +    ++F    ++ G   ++ K     I+S   L G  I   AG+  +  L     
Sbjct: 117 P--DRLKAVSFTGPAWWYGPAIVVAKGNPAGITSFDTLKGKKIGAIAGSAADEYLR---- 170

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSE 213
              +      F+   E  +A    R DA   D    +  +K     P E
Sbjct: 171 --KIGVAVTAFQTDAEEFSAISTGRVDAILEDDVKVIEFMKANAASPIE 217


>gi|218677417|ref|ZP_03525314.1| extracellular solute-binding protein family 3 [Rhizobium etli CIAT
           894]
          Length = 91

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 12/98 (12%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           + F  + +    LF  S   +               G ++    F  V A+G  +GFD+D
Sbjct: 6   RIFAAASIAARSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
             +AL + +    ++  ++  +      AL +K+ D++
Sbjct: 57  ITKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMI 91


>gi|114563245|ref|YP_750758.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Shewanella frigidimarina NCIMB 400]
 gi|114334538|gb|ABI71920.1| periplasmic sensor diguanylate cyclase/phosphodiesterase
           [Shewanella frigidimarina NCIMB 400]
          Length = 912

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 79/250 (31%), Gaps = 17/250 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G++     +  +  N    G  VD    +   +      I+++  +       +++ 
Sbjct: 54  IRVGVDGYFPPYTYINENDQIVGMAVDTLLLIGQKLG-----IEFVINDEHRWPDIVKNL 108

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
           Q   +          E      F     +     I       I++ S ++  +I +    
Sbjct: 109 QQKEIDIVLTMVNTPERENQFLFTSPIVYKSLVIIGKNNNHQINNRSHIANKTIAIVKDY 168

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA--LYALKLTNDRPS 212
                L   F +      P V + + E   A +A++ DA    ++A   Y LK +     
Sbjct: 169 QYSDKLIKEFPS----VTPFVVDNMREAMEAVQANQADAAITFLAAANYYQLKYSFSDLK 224

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT---QKNINQVSKDTT 269
                    +   +A  + Q      +I+     ++ + E++ I      NI     +  
Sbjct: 225 FFAFYEKNNANESIA--VRQDFPILASIMQKGLSSLSSTEKIAINEAWGANITLPKDNQD 282

Query: 270 NPDVQRFLGI 279
             +     G+
Sbjct: 283 LIEFAAVAGV 292


>gi|149020346|ref|ZP_01835238.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae SP23-BS72]
 gi|147930648|gb|EDK81630.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae SP23-BS72]
          Length = 184

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 8/152 (5%)

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S ++DI   N   T  R+    + F         G +  K   I+ V QL G ++ V 
Sbjct: 1   MISNKVDITLANFTVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVT 58

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT E      F+ ++ +     +++  +   A    R DA++ D + + A     +  
Sbjct: 59  KGTTAETY----FEKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENK 112

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              V +  +     +A A+ + + E  + ++ 
Sbjct: 113 GFEVGITSLGDPDTIAAAVQKDNQELLDFINK 144


>gi|78186418|ref|YP_374461.1| extracellular solute-binding protein [Chlorobium luteolum DSM 273]
 gi|78166320|gb|ABB23418.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chlorobium luteolum DSM 273]
          Length = 378

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 12/138 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +   VS+L +I+L      T         +R  LK         FA    +G W G  +D
Sbjct: 24  RLALVSLLFMIMLSSACLRTADGT-----ER-ELKIATKHA-PPFAMQDEHGKWNGLSID 76

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A++        +  ++P++  +   A+   ++D+ +     T+ RE    L F    
Sbjct: 77  LITAIAEK---QGFRATFVPMSLLDMLEAVNRGEVDLAAAALTMTVEREK--QLDFSHPY 131

Query: 123 YFDGQGFIMHKKKGISSV 140
           +  G    + +K+     
Sbjct: 132 FQSGLAIAVREKEDGWKY 149


>gi|295703710|ref|YP_003596785.1| putative amino acid ABC transporter amino acid-binding protein
           [Bacillus megaterium DSM 319]
 gi|294801369|gb|ADF38435.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus megaterium DSM 319]
          Length = 281

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 78/251 (31%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKANGDWKGF 59
           M K +F     + ++      + +S   +   +  +K  ++  +   F       +  G+
Sbjct: 1   MKKLYFTLAFAIGLIMALGGCSQSSSSEN-SDKKVVKVALSDEVNPPFLFTNDQNEPVGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D+ + L   +     K +Y     +   + + + + D           RE        
Sbjct: 60  DMDYLKQLEKKL--PEYKFEYTLGEEETNLIGVSTGKYDFAINWFFKNPEREEKFLYP-A 116

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTE-LTLADYFKAHNMKYHPIVFE 177
               +     +  K +  I ++  ++       + T      L  Y K H  K   +   
Sbjct: 117 HEYGYSLTALVTQKSRNDIKTLDDMADKKFPPVSATGGLRAILNAYNKEHATKPLTLESI 176

Query: 178 RVE---EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E        + DA   +++    ++        ++ +  I+SK P      + +
Sbjct: 177 DNPSTAENLKLVDKGKADAIFLNVTTFNEVQKQLK---LNLKVGGIVSKEPTWLVFNKNN 233

Query: 235 TEWYNIVSWTH 245
            +  + +    
Sbjct: 234 QKLADEIDKAT 244


>gi|167031433|ref|YP_001666664.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Pseudomonas putida GB-1]
 gi|166857921|gb|ABY96328.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Pseudomonas putida GB-1]
          Length = 1247

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 62/224 (27%), Gaps = 11/224 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  G++     F      G ++G   D+   +   +      +   P+        L   
Sbjct: 38  LSLGVDASWPPFEFRDQEGRYQGLAADYIATIQQRLG-----VTLKPVEPSSWTEVLAQA 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           +   +          E    LAF           + HK       +  L G  I V    
Sbjct: 93  RESRIDLLPGIMSTPERQGYLAFTRPYLDFPIVILAHKGGAQPRKLDDLYGLKIAVVENY 152

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                L    + H+   + +    V     A    + DA  GD+++             +
Sbjct: 153 APHELL----RTHHPDLNLVALPNVSSTLQALATDQVDAVVGDLASSIWSLRQLKLDGLY 208

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           V          LA A+ +       I+      M ++E   I Q
Sbjct: 209 VSGETPYRYQ-LAMAVPRDKAVLVGILDKVMADMSSSEISQIQQ 251


>gi|300727963|ref|ZP_07061341.1| ABC-type amino acid transport/signal transduction system
           [Prevotella bryantii B14]
 gi|299774805|gb|EFI71419.1| ABC-type amino acid transport/signal transduction system
           [Prevotella bryantii B14]
          Length = 496

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 6/104 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +  G L    N     +     +G   G D+D  +A++  +      I++  +N      
Sbjct: 164 RPNGHLVVSTNATFPPYEYYD-DGVIVGIDIDVMQAIADILG---MSIEFEDVNFDAVIT 219

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           ++Q+ + D+ +     T   +    + F        Q  ++   
Sbjct: 220 SVQTGKADVGAAGLTVTP--DRLKNVLFSSPYTSCRQVIVVKNN 261


>gi|167590461|ref|ZP_02382849.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 312

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 56/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+    + +     +       L
Sbjct: 63  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLALVPIAWADWPL---GL 119

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I        ++G  I 
Sbjct: 120 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTASPIVKIAEPKDVAGLRII 176

Query: 150 VQAGTTTELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +            F+       A  + R DA     +AL    
Sbjct: 177 TGAGTSQERILLEWSRRNVAQGLRPTELQYFDDDAAARVALLSGRADAVLNPDAALAYEA 236

Query: 206 LTNDR 210
             + +
Sbjct: 237 ARDRK 241


>gi|323357721|ref|YP_004224117.1| amino acid ABC transporter periplasmic protein [Microbacterium
           testaceum StLB037]
 gi|323274092|dbj|BAJ74237.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Microbacterium testaceum
           StLB037]
          Length = 333

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 81/247 (32%), Gaps = 22/247 (8%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE----VKANGDWKGFDVDFCRALSSAI 71
              +   +        + G L   I   +   +       A  D  G + +F   ++  +
Sbjct: 66  AVAALKASGFTP---IEPGKLTVAIGAFVPPLSYQPEGTTAATDVAGTEPNFGELIAEGL 122

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             + + +    +   +  L +QS + D+++ N   T  R+      F      D  GF +
Sbjct: 123 GLEYNPVV---VAWADWPLGIQSGKYDLITSNVTVTEERKEL--YDFA-SYRQDLLGFYV 176

Query: 132 HKK---KGISSVSQLSGASICVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEIDA 184
                   I S   +SG  I V +GT  E  L  +                ++       
Sbjct: 177 RSDSSISKIESSDDISGLKIVVGSGTNQEKVLLKWNEELAAKGKAPAELNYYDDNAAATL 236

Query: 185 AYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A ++ R DA  G   +A +A + T       +I       + +A A  +G+      V+ 
Sbjct: 237 ALQSGRVDATFGPNATAAWAARETGQTKLVGIIPGGWPLAADIAAATKKGNG-LIEPVNI 295

Query: 244 THYAMVT 250
              A + 
Sbjct: 296 ALNAYIA 302


>gi|330817215|ref|YP_004360920.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia gladioli BSR3]
 gi|327369608|gb|AEA60964.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia gladioli BSR3]
          Length = 258

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 73/215 (33%), Gaps = 17/215 (7%)

Query: 35  FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
               G     V F  +   +   +G  VD   A+S+       +++           +L 
Sbjct: 34  VYTVGATATGVPFTFLDVKSNSIQGLLVD---AISATGHAAGFEVKIEQTTFAALIPSLT 90

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQ 151
           +++IDI+S     T  R     + F    Y  G+G ++        SS+  L GA +  Q
Sbjct: 91  TRKIDIISAAMLKTPAR--QQVVDFSDTVYSYGEGLVVPASDTGKYSSMDDLKGAVVGAQ 148

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GT     L        +      ++ V +I       R  A  GD   L      N  P
Sbjct: 149 VGTAFVDALN----KKGIFKEVRTYDSVADILRDVALGRIQAGFGDRPILAYQLQKNPNP 204

Query: 212 SEHVILPDIISKSPLA---PAIIQGDTEWYNIVSW 243
              + L +    S L      + +GD +  + ++ 
Sbjct: 205 K--IRLVEGYQPSVLGQVCFVVRKGDRDTLDKLNE 237


>gi|313683550|ref|YP_004061288.1| diguanylate cyclase with pas/pac sensor [Sulfuricurvum kujiense DSM
           16994]
 gi|313156410|gb|ADR35088.1| diguanylate cyclase with PAS/PAC sensor [Sulfuricurvum kujiense DSM
           16994]
          Length = 854

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 96/267 (35%), Gaps = 21/267 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI----------KKRGFLKCGINTGLVGFAEV 50
           M    F++++  I +FF +       + DI          + +  L   + T    F  +
Sbjct: 1   MRIVHFLALILFIEVFFGTVVYGRDDVKDILTPQERFWLTQNQSRLVYAVETNYSPFVFI 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            ANG+  G   D+   ++S +     + ++  L+  + F  +++ +I I++     T   
Sbjct: 61  GANGEPTGLAYDYMLLVASKLGVHFKEKRFSSLD--DIFSNVRNHEIQIVNA---VTATP 115

Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           + S  L+F           I++K   G      L+G  + +         + +Y     +
Sbjct: 116 KRSEFLSFTNFFISVPNVIIVNKNRNGAMGEKDLTGLRVSLVKS----YAVTEYLMRKGI 171

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
              P +     E        R DA   D+ A  +  ++++  +   +  +      LA A
Sbjct: 172 VVTPNLAANDMEALLDVSFGRADAAVIDL-ATASYLISSNGITNLRVAGETDFNIQLAMA 230

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGI 256
           + + +     I+     A+   E   I
Sbjct: 231 VSKDEPILRTILQKGINAITDKEREEI 257


>gi|254499224|ref|ZP_05111902.1| putative arginine 3rd transport system periplasmic binding protein
           [Legionella drancourtii LLAP12]
 gi|254351538|gb|EET10395.1| putative arginine 3rd transport system periplasmic binding protein
           [Legionella drancourtii LLAP12]
          Length = 244

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 10/216 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L  GI +    F        + GFD++   +L + +    ++ Q+ P+   + F  L   
Sbjct: 22  LTVGIVSYDPPFTMRADKDHYFGFDIELMTSLCTEM---KTQCQFKPMPFNQLFTQLNKG 78

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
            ID+       T  R      +F          F+   K  I++V  L+  ++    G+ 
Sbjct: 79  TIDLAIAAIIITNER--QQQFSFSLPYLISKARFMTTHKNSITTVGDLTKKNVGAIEGS- 135

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
                 D+            +   E + +A   +  D    D  +       N +  + +
Sbjct: 136 ---IFKDWITQKLPGTSITEYSTTELLISALNKNEVDGVLMDDFSADYWITNNQQSFKGI 192

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
             P +I              +  N V+ +   +V +
Sbjct: 193 GEPLLIGTG-YGIMAKNNSIKLINRVNKSLKKLVNS 227


>gi|326781280|ref|ZP_08240545.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
 gi|326661613|gb|EGE46459.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 292

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 82/284 (28%), Gaps = 33/284 (11%)

Query: 5   FFVSILCLIILFFT-------------SFSTNASILGDIKKRGFLKCGIN-TGLVGFAEV 50
              ++LC  +                 + ++ A      +  G L  G +      +   
Sbjct: 13  LSSAVLCAALAGCAPRPAERGASDAPGATASCAPGELATQVPGKLTVGTDKPAYAPWFAD 72

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
               + KGF+     A++  +  D   + +        F A  +K+ D        +  R
Sbjct: 73  DEPSNGKGFESAVAYAVAKELGYDRDAVVWQHTPFNSAF-APGAKKFDFAVNQVSISEER 131

Query: 111 EISLGLAFRPITYFDGQGFI---MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           +    +AF    Y   Q  +     K     SV+ L    +  Q GTT+   + D  +  
Sbjct: 132 KK--AVAFSSGYYDVRQAVVALKSSKAAKAKSVADLKDVKLGAQVGTTSLDFITDLVE-- 187

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKS 224
             K  P V++R +   +A +  + DA   D+          + P                
Sbjct: 188 -PKEKPAVYQRNDFAKSALKTGQVDAIVVDLP-TAFYITGAEVPEAEVVGQFAASPGEPE 245

Query: 225 PLAPAIIQGDTEWYNIVSWTH-----YAMVTAEELGITQKNINQ 263
                +   ++     VS           +   E       ++ 
Sbjct: 246 QFGLVL-DRESALTPCVSGAVDTLRKDGTLAGLEKEWLSDAVDA 288


>gi|307321921|ref|ZP_07601304.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Sinorhizobium meliloti AK83]
 gi|306892434|gb|EFN23237.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Sinorhizobium meliloti AK83]
          Length = 292

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 85/265 (32%), Gaps = 12/265 (4%)

Query: 18  TSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           +  S +A  L    K    +  GI      +  ++ +G  KG  +D  RA    I  D  
Sbjct: 22  SMSSASAETLFEKAKASRTVVVGI-ANEKPYGYLETDGTMKGVIIDVLRAALKPIGIDK- 79

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++            + +++ DI+         R  S+  +       +           
Sbjct: 80  -VEANVSEFSAMIPGINARRFDIIGAGMAIRPQRCESVAFSSPISRLANVVAVKAGNPHS 138

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+  ++ +             LAD  KA   +   + F    E  A  +A R DA   
Sbjct: 139 IHSLEDIAKSDTLKIGSQIGSSQLADLPKAGIPEDRVVSFALDTEAIAGLKAGRVDAIYF 198

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSP--------LAPAIIQGDTEWYNIVSWTHYAM 248
               L  L       +     P  ++K           A    + D+++ N ++     +
Sbjct: 199 PSLQLSDLIHNFGDGAVERAEPFQVAKDDKGNPLYVFQAFGFNKEDSDFVNALNLEIRKL 258

Query: 249 VTAEELGITQKNINQVSKDTTNPDV 273
             + EL    +    + +D  +P++
Sbjct: 259 NESGELLKILEPYGFMKEDVPDPNL 283


>gi|146311737|ref|YP_001176811.1| extracellular solute-binding protein [Enterobacter sp. 638]
 gi|145318613|gb|ABP60760.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Enterobacter sp. 638]
          Length = 295

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 76/250 (30%), Gaps = 19/250 (7%)

Query: 34  GFLKCGINT-GLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   I+       A + ++     G D D  R L+ ++     K++ +P   ++  L 
Sbjct: 50  GTLTVAISALNSPPLALLASDNRTRIGSDPDIARLLAGSLG---LKLKLVPTAWEDWPLG 106

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASI 148
           + S + D+   N   T  R       F      D   F +        I S + L+G  +
Sbjct: 107 ISSGRYDVALVNIAVTEQR--KQKFDFA-TYRVDSLAFSVKSTSDVTSIKSAADLTGKKV 163

Query: 149 CVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +         P+        +   ++ R D + G  S     
Sbjct: 164 IVGSGTNQERILLGWNEENQKAGREPALPVYLTDDASGNLYIQSGRADVFFGPQSVSAYK 223

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +    +      +  +  K        +   E    +       +   E         + 
Sbjct: 224 EALTGK----TRVVGLGPKKAFVATTTKKGNELVYALQAALNGAIQRGEYQKVLARWGEQ 279

Query: 265 SKDTTNPDVQ 274
            +     +V 
Sbjct: 280 GEAVEQSEVN 289


>gi|227873559|ref|ZP_03991802.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Oribacterium sinus F0268]
 gi|227840605|gb|EEJ50992.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Oribacterium sinus F0268]
          Length = 195

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 8/161 (4%)

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+   R   + + ++DI   N   T  R     + F         G +      I SV +
Sbjct: 3   LDPASRVEYVSTGKVDITLANFTVTKERAE--KVDFALPYMKVALGVVSPDNAVIKSVDE 60

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G ++ +  GTT E      F+A++ +     ++   +   A    R DA++ D + + 
Sbjct: 61  LKGKTLIIAKGTTAETY----FEANHPEVKLQKYDAYADAYNALLDGRGDAFSTDNTEVI 116

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A       P   V +  +     +A A+ +G+    N ++ 
Sbjct: 117 AWA--KSNPGFTVGIETLGDYDTIAAAVAKGNESLLNFLNE 155


>gi|254253995|ref|ZP_04947312.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124898640|gb|EAY70483.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 258

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 22/202 (10%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64
           FV+ + + I    + +              L+ G     V F  +   +   +G  VD  
Sbjct: 15  FVTCIAMSIAPTGAAAAEP----------TLRVGATATGVPFTFLDVKSNSIQGMMVD-- 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            A+++A      ++            +L +++ID++S     T  R     + F    Y 
Sbjct: 63  -AITAAGKSAGFRVDVQQTVFSALIPSLTTQKIDVISAAMLKTPAR--QQVVDFSDTVYT 119

Query: 125 DGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
            G+G I+        +S+   +G  +  Q GT     L        +      ++ + +I
Sbjct: 120 FGEGLIVKADDPGRYTSMDDFNGQVVGAQVGTAFVDALN----KKGIFKEVRTYDSIADI 175

Query: 183 DAAYRAHRCDAYTGDISALYAL 204
                  R  A   D   +   
Sbjct: 176 MRDVALGRIKAGFADQPIVAYQ 197


>gi|291457063|ref|ZP_06596453.1| putative amino acid ABC transporter, substrate-binding protein
           [Bifidobacterium breve DSM 20213]
 gi|291380898|gb|EFE88416.1| putative amino acid ABC transporter, substrate-binding protein
           [Bifidobacterium breve DSM 20213]
          Length = 283

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 71/240 (29%), Gaps = 17/240 (7%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L  L     +  A           LK  +      +A  + +G   GF+ +  + +   
Sbjct: 22  TLTGLAACGSAQAADSGEK-----TLKVALVVPNKPYAYAEKDGSPAGFEYEVLKKIDDQ 76

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
             +   K++Y  L  +   + L+  + D++S     T  RE    +       +     I
Sbjct: 77  --NKNIKLEYSTLEYQNALIGLKEGKYDLVSGTFFRTPAREKDYLV--TKPYNYYFLNLI 132

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-----VFERVEEIDAA 185
           ++    I ++  L+G S+     T         ++  +                 ++   
Sbjct: 133 VNPNSKIKTMEDLNGKSVAPIESTDGRYVAFRDWQKKHPNVKIKMEASSTQPTFTDMIQQ 192

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 DA          +K +   P     + D +        + + + +    V+ + 
Sbjct: 193 VHDGTYDAVYLSKDQFDGVKDSLGYPM---KVTDAVDGRDTVFLLNKKNQDAQQQVNKSI 249


>gi|225374916|ref|ZP_03752137.1| hypothetical protein ROSEINA2194_00539 [Roseburia inulinivorans DSM
           16841]
 gi|225213237|gb|EEG95591.1| hypothetical protein ROSEINA2194_00539 [Roseburia inulinivorans DSM
           16841]
          Length = 298

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 72/218 (33%), Gaps = 24/218 (11%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK------ 57
            S         +     A+     K+   L+  ++     F  +    +NG         
Sbjct: 28  ASAGASTGETASVTEAGATTTASGKE--VLRVAMSADYAPFDWLQEDDSNGAVMTSNGSY 85

Query: 58  --GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DV   + ++  +  D   ++   ++     L++QS ++D        T  R  S  
Sbjct: 86  MNGYDVLVAKYIAEKLDMD---LEITQIDWDGLILSIQSGKVDCAIAGMSITSER--SQS 140

Query: 116 LAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           + F    Y      ++        + +V+   GA++     T     L       +    
Sbjct: 141 VDFSDPYYNANIVAVVAADGPYADVVNVTDFEGATLTSILNTVWYDVLDKI---TDYATK 197

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               +    + AA  A + D +T D+ +  ++ ++N  
Sbjct: 198 DAALDTFASMVAAVHAGKIDGFTCDMPSAKSILVSNPD 235


>gi|170728085|ref|YP_001762111.1| extracellular solute-binding protein [Shewanella woodyi ATCC 51908]
 gi|169813432|gb|ACA88016.1| extracellular solute-binding protein family 3 [Shewanella woodyi
           ATCC 51908]
          Length = 722

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 11/219 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I+ RG L+ G     V F+     G   GFD      L+  +      I +      
Sbjct: 471 LQTIRARGTLRVGYIPSNVPFSYYNNAGQLVGFDSAMASKLAEDLDLKIEFIPFQK---D 527

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           +   +L++   DI           E    L++                  + +  + +  
Sbjct: 528 KLAESLKAGFFDIAMSGLAM--DIEQMDKLSYAEPVLELNLAIATR--DHMVNRFKSTER 583

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH--RCDAYTGDISALYAL 204
            + ++  T   +  +D  +    KY  + F ++      +R    + DA     SA    
Sbjct: 584 ILSLEEMTIAYVEHSDIIEEAKRKYTNLNFVKIPGYKNFFRQKSDKYDAVVI--SAQAGS 641

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             T   P   + + +   + P+A A+ Q +    N V+ 
Sbjct: 642 AWTLFFPGYGIAILENSVRYPVAYAVAQNNQSLLNYVNN 680


>gi|307544885|ref|YP_003897364.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307216909|emb|CBV42179.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 299

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 69/257 (26%), Gaps = 12/257 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +   + L  T+ +  A+ L +++++G ++  +    V +  +      +G   +  R
Sbjct: 19  LAWLAVPLALTLTAPTALAASLEELRQQGSIRVAV-ANEVPYGYLDDEDQGQGAGPEVAR 77

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            +   +  D   I+++  +  +    L+  + D+ +        R     + F       
Sbjct: 78  HVLDELGID--DIEWVATSFGDLIPGLEEGRFDMAAAEMAIRPGR--CERVLFSTPNTSY 133

Query: 126 GQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           G+G ++       I      +       A       +             I  E  +   
Sbjct: 134 GEGLLVRATNPLDIRGYEDFARRDDIDVAVLQGASQVDILRSLDVPDTRMIEIESNDAAI 193

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWY 238
               A   DAY G    +  L   +          D      +                 
Sbjct: 194 ETLLADHADAYAGTGLTVSRLGEQSPDVEVVAGFEDPKVDGEIVRSWGGFTFPDDAETLR 253

Query: 239 NIVSWTHYAMVTAEELG 255
           +  +    A     E  
Sbjct: 254 DAFNEVLTAYRHTPEWE 270


>gi|163743448|ref|ZP_02150827.1| sensor histidine kinase [Phaeobacter gallaeciensis 2.10]
 gi|161383278|gb|EDQ07668.1| sensor histidine kinase [Phaeobacter gallaeciensis 2.10]
          Length = 663

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 76/253 (30%), Gaps = 23/253 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   + IL +      + +              ++         ++   + G+ +G  
Sbjct: 1   MIRQILLVILFVTGPAAATVAMAEP----------IRM-TYEEFHPYSFTDSAGEPQGVS 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +D  R ++ A   +   + + P  N       L+S   D ++     T  R         
Sbjct: 50  IDIMRRIADAAGYE---VLFQPTQNPAGMLEELRSGAAD-VTSLLALTPERLA--AGLAT 103

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                      +     ++++  L+G ++ V  G+           A       + F+  
Sbjct: 104 EKLGAFELRAFVRGNGSVANLGDLTGTTVGVVRGSFAVSGARLIPFAR-----LVEFDTT 158

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +++         D      +         +  ++ V L   +  SP    +   +     
Sbjct: 159 DDLILPLLTGEIDGVVSAHNGFLRRLRMAEVENQIVALEPPLVTSPYGFVVAAENEPLRT 218

Query: 240 IVSWTHYAMVTAE 252
           +++   Y+ ++ E
Sbjct: 219 VLNAAIYSSISPE 231


>gi|323529851|ref|YP_004232003.1| family 3 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gi|323386853|gb|ADX58943.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1001]
          Length = 286

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 70/247 (28%), Gaps = 35/247 (14%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   +   +  G   +      G   GF+ +    L   I     +   +  +      
Sbjct: 30  KEWKTVTIALEGGYAPWNLTLPGGKLGGFEPELVANLCERI---KLQCNLVAQDWDGMIP 86

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---------- 140
            LQ+ + D+L      T  RE  +  +               K    ++           
Sbjct: 87  GLQAGKFDVLMDAISITPEREKIIAFSKPYAATPATFAVADAKVLPKAAPGAAVVKLSGD 146

Query: 141 ------------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
                        QL G +I +Q+GT     + D FK         V++   E D     
Sbjct: 147 PKADQPTVDALRKQLKGKTIGIQSGTVYTKFINDGFK---DIATIRVYKTSPERDLDLAN 203

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243
            R DA   D++   A     +  S  +  P I    P+       A  + D +       
Sbjct: 204 GRIDASFDDVTYYAANVDKKETSSIIMAGPKIGG--PIWGPGEGLAFRKQDADLKAKFDT 261

Query: 244 THYAMVT 250
              A + 
Sbjct: 262 AISAALA 268


>gi|187919538|ref|YP_001888569.1| family 3 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gi|187717976|gb|ACD19199.1| extracellular solute-binding protein family 3 [Burkholderia
           phytofirmans PsJN]
          Length = 286

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 73/275 (26%), Gaps = 32/275 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +   LI     + +  A+     K    +   +  G   +      G   GF+
Sbjct: 1   MKVKRTTAAKTLIGAVLGAAAIFAAPAQA-KDWKTVTIALEGGYAPWNLTLPGGKLGGFE 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L   I     +   +  +       LQ+ + D+L      T  RE  +  +   
Sbjct: 60  PELVANLCERI---KLQCNLVAQDWDGMIPGLQAGKFDVLMDAISITPEREKIIAFSKPY 116

Query: 121 ITYFDGQGFIMHKKKGISSV----------------------SQLSGASICVQAGTTTEL 158
                       K    ++                        QL G +I +Q+GT    
Sbjct: 117 AATPATFAVADAKVLPKAAPGAGVVKLSGDPKADQPTVDALRKQLKGKTIGIQSGTVYTK 176

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHV 215
            + D FK         V++   E D      R DA   D++   A     +         
Sbjct: 177 FINDGFK---DIATIRVYKTSPERDLDLANGRIDASFDDVTYYAANIDKKETASIVMAGP 233

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            +   I       A  + D +          A + 
Sbjct: 234 KIGGPIWGPGEGLAFRKQDADLKAKFDTAISAALA 268


>gi|15902664|ref|NP_358214.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae R6]
 gi|194398694|ref|YP_002037353.1| ABC transporter substrate binding protein [Streptococcus pneumoniae
           G54]
 gi|298229792|ref|ZP_06963473.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298254828|ref|ZP_06978414.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502490|ref|YP_003724430.1| ABC superfamily transporter ATP-binding protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|303255873|ref|ZP_07341914.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS455]
 gi|303259972|ref|ZP_07345946.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|303261378|ref|ZP_07347326.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264045|ref|ZP_07349966.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS397]
 gi|303266937|ref|ZP_07352813.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS457]
 gi|303269239|ref|ZP_07355015.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS458]
 gi|15458203|gb|AAK99424.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae R6]
 gi|194358361|gb|ACF56809.1| ABC transporter, substrate binding protein [Streptococcus
           pneumoniae G54]
 gi|298238085|gb|ADI69216.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|302597257|gb|EFL64362.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS455]
 gi|302637512|gb|EFL67999.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638891|gb|EFL69352.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae SP-BS293]
 gi|302641246|gb|EFL71617.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS458]
 gi|302643511|gb|EFL73782.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS457]
 gi|302646450|gb|EFL76676.1| amino acid (glutamine) ABC transporter substrate binding protein
           [Streptococcus pneumoniae BS397]
 gi|327390425|gb|EGE88766.1| putative amino-acid transporter periplasmic solute-binding protein
           [Streptococcus pneumoniae GA04375]
          Length = 182

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 8/152 (5%)

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S ++DI   N   T  R+    + F         G +  K   I+ V QL G ++ V 
Sbjct: 1   MISNKVDITLANFTVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVT 58

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT E      F+ ++ +     +++  +   A    R DA++ D + + A     +  
Sbjct: 59  KGTTAETY----FEKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENK 112

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              V +  +     +A A+ +G+ E  + ++ 
Sbjct: 113 GFEVGITSLGDPDTIAAAVQKGNQELLDFINK 144


>gi|227873565|ref|ZP_03991807.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease/substrate-binding protein [Oribacterium sinus
           F0268]
 gi|227840589|gb|EEJ50977.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease/substrate-binding protein [Oribacterium sinus
           F0268]
          Length = 301

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 17/199 (8%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            I+ R  ++ GI+     F+ +    +  GFDV+   A++     +   ++++P+N    
Sbjct: 37  KIQGR-EVRLGIDRDNAPFSYLDEEKNPAGFDVELIEAIAR---LEGFTVKFVPMNPSAL 92

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGAS 147
             A+ +  I       +    RE    L+F         G +   +      +  L G S
Sbjct: 93  QSAVVTGTIVGAMGGIEI---REE-KQLSFSEAYGSSTLGLLYGDQSSASEQMPSLQGKS 148

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           I V+ G+ T + L    +        +  +  +++   +   + D    D+  L A+K  
Sbjct: 149 ILVKEGSGTAVFLESIRQKEGFSLLVV--QENQDLIREWLEGKGDFIAEDLPVLEAMKEE 206

Query: 208 NDRPSEHVILPDIISKSPL 226
             +      + +       
Sbjct: 207 IPK------IDETGRTEDY 219


>gi|327331113|gb|EGE72853.1| serine/threonine-protein kinase PknD [Propionibacterium acnes
           HL097PA1]
          Length = 180

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 9/130 (6%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81
            A +  DIKK G L+ G+         +  +G    G+D+D+  A+   +     K+   
Sbjct: 58  AAMVPDDIKKSGTLRNGVAANYAPAEFIDTDGSTVIGYDIDYITAVGKLMG---LKVTTT 114

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SV 140
                    AL S + D+       TL RE  + +      +  G    + K      S 
Sbjct: 115 NAAFPSLIPALGS-KYDVSVSAFTITLEREKQVTM---ASYFKAGFSMAVPKGNPKKISP 170

Query: 141 SQLSGASICV 150
             L G ++ V
Sbjct: 171 DDLCGHTVAV 180


>gi|325289252|ref|YP_004265433.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324964653|gb|ADY55432.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 282

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 71/252 (28%), Gaps = 13/252 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKK-RGFLKCGINTGL-VGFAEVKANGDWKG 58
           M K     ++  I + F   +  A+     +  +  +K GI       F  +       G
Sbjct: 1   MKKWLSFLLVLAISISFAGCAKQAAPAETAQDGKTVVKVGIGNEFSPPFLLLDDQKQPIG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+D+   L   +     + QY     + + +   + +             R        
Sbjct: 61  YDMDYLNELQKKL--PEYQFQYELGGDETQLIGTSTGKYAFAINFYFKNAERAQKFLYP- 117

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP---- 173
                +     +    +  I S   L G  +   A +     + +++ + +         
Sbjct: 118 ENPYGYSATALVTKTDRNDIQSFGDLVGKKLTPMAASGGLRGIINHYNSTHPDKQVAIES 177

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I      E        + DA   +       +  N      + +  I+SK P+     Q 
Sbjct: 178 IDNPSHAENLKTVANGKADASFLNAI---TFQEVNKNLKLDLKISGIVSKEPVYVVFNQS 234

Query: 234 DTEWYNIVSWTH 245
            TE    +    
Sbjct: 235 QTELAKKIDAAT 246


>gi|242278622|ref|YP_002990751.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242121516|gb|ACS79212.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 284

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 82/242 (33%), Gaps = 21/242 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +S +  I++   + +  ++          L    ++ +   A +   G+  G  
Sbjct: 1   MNKSILLSFIAAILILLPAIAAASTP---------LIITHSSSMPPLAFINKEGEPDGVL 51

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF +  S  +     +I +     KE      + + D ++    ++  R   L      
Sbjct: 52  IDFWKEWSEQV---EVEIIFKLQPWKEAVQETVNGKAD-INGGMFYSESRAKKLLY---G 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
              F  +G +      I +     G S  V     +++ + ++F         ++F    
Sbjct: 105 DYLFHIKGSLFTTPDIIVNDQIADGQSCGVIKADYSKIFMEEHFP----YTKLMLFNSAA 160

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+  A    R  A+  D      L       +    + D+ +++   P + + + +    
Sbjct: 161 EMFNAAAEGRVKAFVADYPVAIYLLSELGIANSFKCVKDLYTRNLY-PTVGRHNPDLIKR 219

Query: 241 VS 242
           ++
Sbjct: 220 IN 221


>gi|114046719|ref|YP_737269.1| extracellular solute-binding protein [Shewanella sp. MR-7]
 gi|113888161|gb|ABI42212.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           MR-7]
          Length = 292

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 82/250 (32%), Gaps = 13/250 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F  IL L I  F +F   +  +  +     L+ G N     +A     G+ +G DV+  R
Sbjct: 9   FSHILLLCIFIFPTFGAPSEAVVSVCLN-PLRVGYN-DWPPYAWRDQQGEAQGLDVELLR 66

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A +  +  +   + ++ + AK     L+S  +D++      T  RE     +        
Sbjct: 67  AFAEHLGCE---VIFINVPAKRSHQMLKSGSLDMMMGA-TKTAKREEYALFSAAYRDEEV 122

Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTL--ADYFKAHNMKYHPIVFERVEE 181
               +  KK  I       +    + +    +    +      +    ++  I+    ++
Sbjct: 123 RLFVLDEKKDKIQLTQWQDIFSQKLRLLVPISGWYGVDYEQTRQRLEQEHLLILSPDADK 182

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                   R D   GD  A+     +  +      L  ++ ++ +   +    T   + V
Sbjct: 183 SVQMLTYGRADLIIGDSMAMP-YIASQHQGVRLSPLKPVLDRNQI-HLMFSKQTSLSSRV 240

Query: 242 SWTHYAMVTA 251
                  + A
Sbjct: 241 KQ-FNVAIEA 249


>gi|114569556|ref|YP_756236.1| putative transglycosylase [Maricaulis maris MCS10]
 gi|114340018|gb|ABI65298.1| Lytic transglycosylase, catalytic [Maricaulis maris MCS10]
          Length = 467

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 13/231 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L  I++RG L      G    + +   +G   G++VD   A ++++         +  
Sbjct: 44  DTLATIRERGELVVLTLAG--PTSLIENEDGPPSGYEVDLANAFAASLGVTARFE--VAA 99

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQ 142
           +  + F AL +    + +     T  R  S  LAF P+     +  +  +     + + +
Sbjct: 100 SLPDLFDALAAGDGHVAAAGLTLTPER--SERLAFSPVYKSVTEQLVCRRGGVNPTRLER 157

Query: 143 LSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           L  A I V  G++ E TL      H   ++          +  A    + D    D    
Sbjct: 158 LPDADIVVLEGSSYEETLRAIGVTHTALRWRTRPGGSAMPLLEAVDDGQADCTIADSHLA 217

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              +  +    E ++  ++  + PLA A           +    +A   A+
Sbjct: 218 DFARRRHP---ELIVARNLTGEQPLAWAYDARIDGLGEAL-SAWFATAHAD 264


>gi|149377589|ref|ZP_01895328.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Marinobacter algicola DG893]
 gi|149358131|gb|EDM46614.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Marinobacter algicola DG893]
          Length = 980

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 69/246 (28%), Gaps = 21/246 (8%)

Query: 16  FFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
             +   ++   L D     I + G ++ G  +    F+   A+   +G  VD    +S  
Sbjct: 262 GTSVAESSGFTLSDAHQRYISEAGPVRVGFMSDYAPFSFHDAD-ALQGLSVDVLNRISDL 320

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-F 129
                  +        E +    ++ ID +  N   T  RE      F    +      F
Sbjct: 321 TGLQIIPVPGQ---WSELYPRFLNRDID-IMANISKTEEREAFTR--FTRPYHIIPNVAF 374

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
            + K    +S++ L G  + + +G   E  L +    +        F   + +  A    
Sbjct: 375 TLDKNLLFNSLADLQGLKVAIGSGIYYEGALREALGDN-----VFSFTAQQAMFQALAEG 429

Query: 190 RCDAYTGDISALYALKLTN---DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
             D     +                    +  D +    L   +         I+     
Sbjct: 430 SVDVALAALPNGNYWVRELRIAGVDIAGEMTLDGMPGEDLRFGVRPALEPLAFIMDAALG 489

Query: 247 AMVTAE 252
           A+   E
Sbjct: 490 AISQTE 495



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 90/296 (30%), Gaps = 32/296 (10%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
               SI  ++ L F S     S+   +        GI      +  +       GF +D 
Sbjct: 14  TLLASIYGVLALTFLSTFAWPSVNEPV------SVGIVADNKPYTSMVGR-TASGFSIDI 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            R ++     D   I++      E F A +  +IDI+      +   + +  + F    +
Sbjct: 67  VREVARQSGLD---IEFRAGTWPEVFGAFERGEIDIIEG---ISYNDDRARTVQFTKPYH 120

Query: 124 FDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +         I S+  L+   I V         L             + ++ + 
Sbjct: 121 IRQMHLMHDPVNPLKNIDSLESLNDYRIGVVRDVYFRDALQT------AGVSLVTYDSIP 174

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII---SKSPLAPAIIQGDTEW 237
            +  A      D   G    L             +  P  +   SK      +++ + E 
Sbjct: 175 GLIRALAFGWVDGIIGPELTLDYYANQAGFRFLEIAGPAPLGEWSKEDFRLGVLKENDEL 234

Query: 238 YNIVSWTHYAM--VTAEEL-----GITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
           +N+VS    A+     EEL          ++ + S  T +   QR++       +G
Sbjct: 235 FNVVSSGLAAIPDERIEELFNRWQEYGGTSVAESSGFTLSDAHQRYISEAGPVRVG 290



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 71/228 (31%), Gaps = 17/228 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL---NAKERFLAL 92
           L   ++   +    +  +    G   D       A+F + S I++ PL   +  E   A+
Sbjct: 536 LTICVDPDWLPLEGLSEDNKHLGISADI-----FALFTERSNIKFTPLPVDSWAESIKAV 590

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQ 151
           + +Q D+LS         E+   L+F           +   +   I+++  +S   + V 
Sbjct: 591 KERQCDLLSMAM---ETPELLEYLSFTEPYIQIPSVLLGRVEAPYINTLDDISDQPVGVV 647

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
                   L    +  N   + +     +      +  +   Y G +S            
Sbjct: 648 KDYAFLELL----RTTNPHLNLVEVPSEKTGLRMVQERKLAGYLGTLSTASYNMQELGLA 703

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
              V+       +P   A      E  NI+     ++   E   + Q+
Sbjct: 704 DLKVLGRIPADWTP-GVATRNDQPELLNIMQKLVSSLTDEERKSVEQQ 750


>gi|111658694|ref|ZP_01409337.1| hypothetical protein SpneT_02000202 [Streptococcus pneumoniae
           TIGR4]
 gi|149005814|ref|ZP_01829553.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae SP18-BS74]
 gi|307126892|ref|YP_003878923.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus pneumoniae 670-6B]
 gi|147762754|gb|EDK69714.1| ABC transporter substrate-binding protein - unknown substrate,
           truncation [Streptococcus pneumoniae SP18-BS74]
 gi|306483954|gb|ADM90823.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus pneumoniae 670-6B]
 gi|332077122|gb|EGI87584.1| putative amino-acid transporter periplasmic solute-binding protein
           [Streptococcus pneumoniae GA17545]
          Length = 184

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 8/152 (5%)

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           + S ++DI   N   T  R+    + F         G +  K   I+ V QL G ++ V 
Sbjct: 1   MISNKVDITLANFTVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVT 58

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            GTT E      F+ ++ +     +++  +   A    R DA++ D + + A     +  
Sbjct: 59  KGTTAETY----FEKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENK 112

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              V +  +     +A A+ +G+ E  + ++ 
Sbjct: 113 GFEVGITSLGDPDTIAAAVQKGNQELLDFINK 144


>gi|224371063|ref|YP_002605227.1| AtoS3 [Desulfobacterium autotrophicum HRM2]
 gi|223693780|gb|ACN17063.1| AtoS3 [Desulfobacterium autotrophicum HRM2]
          Length = 846

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 71/223 (31%), Gaps = 9/223 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G ++            +    ++ G   D+ R +   +     +++    +  E   + +
Sbjct: 46  GTIRLAHTPDWPPLDFLNEKNEFSGMAADYIRLIEKKLGFKFKRVRMK--SWSELIESAK 103

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           +  ID++S   + T  R   +  +  P         +  + +G  ++ Q+ G  I V   
Sbjct: 104 AGTIDVISAGQE-TASRREFMNWS-TPYLNLKTTIIVKRQLQGQLTLDQMQGMKIGVV-- 159

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             ++  + ++          I  +   +          DA   ++       + ++R + 
Sbjct: 160 --SQYAVGEFIHQGYPDLTLINVDSSIQGIEKVSFGELDAMITEVP-NALYIIESERITN 216

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
             +  D   K      I +    +  I+     ++   E   I
Sbjct: 217 LRLAGDTGFKLNHGMGIRKDWPVFSRIIEKALLSITDQEHKEI 259


>gi|323342023|ref|ZP_08082256.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322464448|gb|EFY09641.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 537

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 66/225 (29%), Gaps = 32/225 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---------- 50
           M K   + ++ L I   T+                L  G+      F             
Sbjct: 6   MKKVLLLFLVLLTITGCTNSGHRQDD---------LVVGMECNYAPFNWTQSTETEFTEP 56

Query: 51  --KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
               +    G+DV   R ++  +  D + +       K    + +   ID++      T 
Sbjct: 57  LSDGHSYCDGYDVQMARHIAKEL--DRNLVIKEHAVFKGLLESAKVGDIDLIIAGMTNTE 114

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFK 165
            R     + F  + Y      +  K        ++   SGA +  Q GT  +  L D   
Sbjct: 115 ER--RQEVDFTDVYYTSQMVLVTKKNSPYVDAKTLQDFSGAHVSAQIGTMHDQ-LVDQIP 171

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           A       +  E    +  A   +  DA+  +     A+  +N  
Sbjct: 172 AVKHG---VPLESFPFLTTAVNNNAIDAFVSEKPVALAITSSNPN 213


>gi|190894715|ref|YP_001985008.1| putative amino acid ABC transporter substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190700376|gb|ACE94458.1| probable amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 282

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   + +S + L +L  T+ +  +     L  +K++GF +  I      F  V A+G   
Sbjct: 1   MKAGYVLSAVSLSVLLVTAAAPASAADDKLEQLKEQGFARIAI-ANEPPFTAVGADGKVS 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   D  R +   +                    LQ+ + D ++        R     +A
Sbjct: 60  GAAPDVARVIFEKLGVKEVVASIS--EYGAMIPGLQAGRHDAITAGLFMKPER--CNAVA 115

Query: 118 FRPITYFDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +      D + F + K   +       ++    A I    G T E       +A   +  
Sbjct: 116 YSEPILCDAEAFALKKGNPLKLTSYKDIADNPNAKIGAPGGGTEEKLA---LEAGVPRDR 172

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            IV    +      +  R D Y+  + +++ L      P+   + P + +       A  
Sbjct: 173 VIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMDKAQDPNLETVAPVVNAPVYCDGAAFR 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D    +        +  + E  
Sbjct: 233 KQDVALRDAFDVELKKLKESGEFA 256


>gi|157363114|ref|YP_001469881.1| metal dependent phosphohydrolase [Thermotoga lettingae TMO]
 gi|157313718|gb|ABV32817.1| metal dependent phosphohydrolase [Thermotoga lettingae TMO]
          Length = 673

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 65/245 (26%), Gaps = 24/245 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F  +L  I +   +                L          F      G+  G  
Sbjct: 1   MKIRCFTVLLIFIFVTVFATQ-------------TLIFVSGDFYPPFIFKDEKGNIVGIS 47

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD    L   I     K +   L   +    L+  + D++      T  RE      F  
Sbjct: 48  VDILHLLEKKI---DVKFEIKLLPFSQALEKLERSEADMI-NFIFKTPQRE--QLFLFSD 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +         K   I + S LS   + V      E  L               F+ +E
Sbjct: 102 PIFNIESRVYFRKNLNIKNFSDLSRYVVGVVEKDANEQLLRR----KVSSVSFKYFKNME 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+  A R ++ D +  +        +  D       L  I  +     A  +   +   +
Sbjct: 158 ELMYAIRENQIDVFLMENLTAQYYLVKYDIFHLFTSLEPISIQQIY-FAFPKSKPQIAEL 216

Query: 241 VSWTH 245
           ++   
Sbjct: 217 INSGL 221


>gi|215275607|sp|Q0AQY9|MLTF_MARMM RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
          Length = 456

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 13/231 (5%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L  I++RG L      G    + +   +G   G++VD   A ++++         +  
Sbjct: 33  DTLATIRERGELVVLTLAG--PTSLIENEDGPPSGYEVDLANAFAASLGVTARFE--VAA 88

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQ 142
           +  + F AL +    + +     T  R  S  LAF P+     +  +  +     + + +
Sbjct: 89  SLPDLFDALAAGDGHVAAAGLTLTPER--SERLAFSPVYKSVTEQLVCRRGGVNPTRLER 146

Query: 143 LSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           L  A I V  G++ E TL      H   ++          +  A    + D    D    
Sbjct: 147 LPDADIVVLEGSSYEETLRAIGVTHTALRWRTRPGGSAMPLLEAVDDGQADCTIADSHLA 206

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
              +  +    E ++  ++  + PLA A           +    +A   A+
Sbjct: 207 DFARRRHP---ELIVARNLTGEQPLAWAYDARIDGLGEAL-SAWFATAHAD 253


>gi|260429869|ref|ZP_05783845.1| ABC transporter, substrate binding protein [Citreicella sp. SE45]
 gi|260419352|gb|EEX12606.1| ABC transporter, substrate binding protein [Citreicella sp. SE45]
          Length = 277

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 14/206 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTN-ASILGD--IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           +   +++L  + L   + + +  + +    + + G L   ++  L   A  +++G  KG 
Sbjct: 6   RTLALAVLTSMGLAAAAAAQDCETTIDASLLTEEGKLTMAVSPTLPPMAYAESDGTLKGL 65

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V+    ++  +  +P    ++          LQ  + D++      T  R   L + + 
Sbjct: 66  RVELGVEVAKRLCLEPD---FISTEYATMVPGLQGGRWDVIDAGLFVTPAR---LEIMYM 119

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPI 174
                             I +V  L+G  +    G   E  +     D+ +    +    
Sbjct: 120 IPYENLAISISTATGDDSIKTVEDLAGKRVSTDIGGYAEAKMRELNKDFAEKGLEQIDIA 179

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISA 200
           +F+    +  A RA + +A       
Sbjct: 180 LFDNYATVYQALRAGQVEAAVSIDPV 205


>gi|71906109|ref|YP_283696.1| extracellular solute-binding protein [Dechloromonas aromatica RCB]
 gi|71845730|gb|AAZ45226.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Dechloromonas aromatica RCB]
          Length = 250

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 59/229 (25%), Gaps = 30/229 (13%)

Query: 1   MYKDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +   +S+L   +    L   +                L+  +       +     G  
Sbjct: 1   MLRSLAISLLFFALPAAGLLGGAVRAAEP---------VLRVVVLENSPPMSYRDETGQL 51

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GF V+  RAL   I    +   +   +       +   + DI +     T  R     L
Sbjct: 52  TGFSVEIARALCQEI---RANCAFDVADQSTLLDTVAKGKADIAAAAVFETAER--RGRL 106

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F                    +   +      ++          DY +    + H +  
Sbjct: 107 LFAKPY--------YRSLSLWLARPDVVPGRSGIRVAVVHGSAQEDYARRQGWEMHQVR- 157

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
               ++          A       + AL+L    P   + L   + ++P
Sbjct: 158 -NNADLAGVLLGGEAQAALV--PMISALQLQKSDPFRRLGLAPTVLRAP 203


>gi|330939243|gb|EGH42646.1| ABC transporter binding protein-like protein AabH [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 290

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 87/257 (33%), Gaps = 22/257 (8%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            L++    SF   A +L   +  G L  GI      +A +  +G   G +V+  RA+   
Sbjct: 16  ALLLNAVISFPALAGLLEKGRTDG-LTAGIANEQ-PYAYIGTDGKATGANVEILRAILEP 73

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +     +      +       L + + D++         R   +   F       G  FI
Sbjct: 74  LGIKQIETPI--TDFGSLVPGLAAGRFDLIGAGLFINPNRCKVIA--FSNPVTRSGGAFI 129

Query: 131 MHKKKGIS-----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           +     ++      V+  +   +  Q G+       D   A+    + ++F++  E  AA
Sbjct: 130 VKTGNPLNLHSLKDVASNTKVRLATQPGSNQVQEAKDSGIAN---SNVVLFDKDTEALAA 186

Query: 186 YRAHRCDAYTGDISALYALKLTN-----DRPSEHVILPDIISK---SPLAPAIIQGDTEW 237
            +A R D      + + +L         +R      +PD   K   +  A  + + D  +
Sbjct: 187 LQAGRVDVVYFPDAEVISLIKKANSADIERALPFEQIPDASGKPGWNYHAYGLPKNDPAF 246

Query: 238 YNIVSWTHYAMVTAEEL 254
               +     +  + EL
Sbjct: 247 EQAFNEQLAKLRASGEL 263


>gi|293606210|ref|ZP_06688573.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815357|gb|EFF74475.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 304

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 70/240 (29%), Gaps = 16/240 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           L   K  G ++ G       FA + +      G  V+  R +   +  +   ++ +    
Sbjct: 44  LEAAKAAGKIRIGY-ANEAPFAYMDSKEAKVTGESVEIARVVLKRMGINE--VEGVLTEF 100

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQL 143
                 L +K+ DI++     T  R     +AF   TY  G+ F++     K + S   +
Sbjct: 101 GSLIPGLAAKRFDIIAAGMYVTPER--CQQVAFSDPTYGVGEAFLVKEGNPKNLHSYEDV 158

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS---- 199
                         +      K        +VF       +  +A R DAY         
Sbjct: 159 VKNPDAKLGVVVGAIEGGYAEKVKVPSGQVVVFPDAVSALSGVQAGRADAYAATALTIND 218

Query: 200 ----ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                     L    P    ++     +   A A    D  + +  +      +  +E  
Sbjct: 219 LMGKTQAGSGLEKADPFTDPVIDGKGVRGYGAYAFRTDDKAFADAFNAELAKYIGTDEHK 278


>gi|27378947|ref|NP_770476.1| hypothetical protein bll3836 [Bradyrhizobium japonicum USDA 110]
 gi|27352097|dbj|BAC49101.1| bll3836 [Bradyrhizobium japonicum USDA 110]
          Length = 286

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 16/251 (6%)

Query: 14  ILFFTSFSTNASILGDIKK-RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
            +  +     A     +    G L+ GI  G        A G   G   D    L+  + 
Sbjct: 38  TVGLSGSFAKADGEAKLLAPSGTLRVGIYPGSPTSMVTDAAGKPHGLAYDLGGELAKRLG 97

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
                +++  +   +   A+   ++D    N         +  ++F         G+++ 
Sbjct: 98  VGVDYVRFERVA--DIVTAIHDGRVDFTVTNAT----PARASEVSFSQPVLAIELGYLVP 151

Query: 133 KKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
               +  V  +   G  I V  G+T+E TL   FK        +  E V+     +    
Sbjct: 152 ANSPVGKVEDIDKPGVKIGVTKGSTSERTLPAKFK----NATIVPAESVKAAIGMFGRGE 207

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            D Y  +   L+ +           IL        +A AI +G  +   +++       +
Sbjct: 208 IDLYATNKPTLFEMSDQMPGAK---ILDGNWGLEHMAIAIPRGREDALPMLNRFVTEEQS 264

Query: 251 AEELGITQKNI 261
           +  L   Q+  
Sbjct: 265 SGALDTIQQQA 275


>gi|223933677|ref|ZP_03625654.1| conserved hypothetical protein [Streptococcus suis 89/1591]
 gi|223897670|gb|EEF64054.1| conserved hypothetical protein [Streptococcus suis 89/1591]
          Length = 122

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 25/135 (18%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M +   + +L LI +F  +          ++   +L+ G+      F       +NG   
Sbjct: 1   MKRKLSIFLLTLIAVFSVTTG--------VRADEYLRVGMEAAYAPFNWTQEDDSNGAVP 52

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + +++++  +   ++      +    AL S +ID++      T 
Sbjct: 53  IEGTNQFANGYDVQVAKKIAASMDKELLVVK---TKWEGLVPALTSGKIDMIIAGMSPTE 109

Query: 109 LREISLGLAFRPITY 123
            R+  +   F    Y
Sbjct: 110 ERKKEIA--FSDSYY 122


>gi|170694458|ref|ZP_02885611.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170140592|gb|EDT08767.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 206

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 17/170 (10%)

Query: 1   MYKDFFVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +   + +   +   +  +     A           L  G N G   FA  + +  + G
Sbjct: 1   MNRRQLLQLGGAVGPAMLLSRSVQAADA--------ELVVGSNVGAPPFAFKQGD-TYSG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDV+    ++  +       +  P+       ALQ+  ID++         R     + F
Sbjct: 52  FDVEVWDEVAKGL---NRTWRLQPMEFGALIPALQTHNIDVIVSQLFIKPER--RQVIDF 106

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
               Y  G   +       I S   L+G  +  + GT     + ++ K  
Sbjct: 107 SDPYYKSGLIALTRIDNTTIYSAGDLAGKHLGTETGTVAVGYIKEHIKDA 156


>gi|239814894|ref|YP_002943804.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239801471|gb|ACS18538.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 268

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 85/237 (35%), Gaps = 16/237 (6%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            L  IK+RG +  G+  G   F  +        G++ D  R L+  +  +   +Q   + 
Sbjct: 21  TLDRIKQRGKVAIGVVVGGGPFGSIDPATQQLVGWNPDLARDLAKQLGAEAELVQ---VQ 77

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
              R   LQS ++D+L  + ++   R   LG A  P     G   ++ K  GI+    L 
Sbjct: 78  PSNRVQFLQSGKVDLLIASMEYNADRGEILGHAPTPFYRVGGTAAVL-KTSGIAKWEDLR 136

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYA 203
           G  +C   G++    L + + A         F+   E   A R   C A   D +     
Sbjct: 137 GKVVCASQGSSYVKPLQEQYGA-----QVRGFKTSAESLLALRGGNCVAAVHDATLIQPL 191

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-----AMVTAEELG 255
           L+   +  +    + D I  +P      +G+ +    V            + A E  
Sbjct: 192 LRNNAEWAAYAAPIRDEILPAPSVVWTRKGEADTIAAVDKVVQQWHRSGWLIATEKR 248


>gi|242279786|ref|YP_002991915.1| signal transduction histidine kinase, nitrogen specific, NtrB
           [Desulfovibrio salexigens DSM 2638]
 gi|242122680|gb|ACS80376.1| signal transduction histidine kinase, nitrogen specific, NtrB
           [Desulfovibrio salexigens DSM 2638]
          Length = 701

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 64/275 (23%), Gaps = 64/275 (23%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +     +  +  +G   GF+VD  RA++ A       I        E    L+    D++
Sbjct: 37  DNNYPPYEYL-EDGVPTGFNVDIIRAVAEASG---LNIGINLRPWSEVVDNLEKGASDVV 92

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
                       +    F            +     I  +  L    I VQ        +
Sbjct: 93  LGMY---FSPARTELFDFSIPHNIISHSIFVRLGSDIKRLEDLHDKEILVQRS----DIM 145

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
            DY      +   I             + + DA           ++T +           
Sbjct: 146 HDYALERYPEATIIPVADQASALKLLSSGKHDAALLGKMQNL-FRVTEEGIDNLGTTGAD 204

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
            +      A+ +G+ E                                        LG  
Sbjct: 205 FAFGKYCFAVRKGNAE---------------------------------------LLGRL 225

Query: 281 KSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
                             +I+  G Y E++++  G
Sbjct: 226 NEG-------------LNLIKKSGKYDEIYEKWFG 247


>gi|294676010|ref|YP_003576625.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Rhodobacter capsulatus SB 1003]
 gi|294474830|gb|ADE84218.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacter capsulatus SB 1003]
          Length = 258

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 54/205 (26%), Gaps = 12/205 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +             V  +G   G++ D    ++  +      + Y   +       + + 
Sbjct: 28  ITVVTEDAYPPLQFVDGSGKAVGWEYDAMAEMAKRL---HLTVTYEHSSWDAMIPGVSAG 84

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----KKGISSVSQLSGASICVQ 151
           Q D     T  T+  +    + F           ++           S +      +  Q
Sbjct: 85  QYD--IGMTGITIRDDRKTAVDFSDPYMRSEMIMLVRSDESRFSDAKSFAANPDLLMAAQ 142

Query: 152 AGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            GTT   + + +    +       +FE       A R    D    D +A       +D 
Sbjct: 143 PGTTPFYVGVYELLDGNEANPRIKMFETFGAGVEALRGGDVDLVLTDSTAGEGYARASD- 201

Query: 211 PSEHVILPDIISKSPLAPAIIQGDT 235
                I+ + +          +G  
Sbjct: 202 -GALKIVGEKLGAEDFGFIFPKGSD 225


>gi|257069825|ref|YP_003156080.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
 gi|256560643|gb|ACU86490.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
          Length = 310

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 67/233 (28%), Gaps = 14/233 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            +I++RG L  G          V ++G+  G+D+D   A+ + +         +     +
Sbjct: 65  EEIRERGELVNGAALNYAPGEFVGSSGEAIGYDMDILAAVGAVLGLSTRTEAAV---FAQ 121

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGA 146
              A+ S   D+   +      R  ++ +      +  G  + +            L G 
Sbjct: 122 IIPAVGS-TYDVGISSFTVNEERLEAVTM---VSYFQAGISYAVKAGNPYDIHPDELCGK 177

Query: 147 SICVQAGTTTEL----TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + +Q GT  E        +   A    Y  + +    +        + D    D     
Sbjct: 178 RVALQVGTFQEELSIARSQECRDADEPAYDMLAYASNSDAATNVAGGKGDILMADSPVTA 237

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                +        + DI   +     + +   E    +      ++    + 
Sbjct: 238 YAIARSR--GTLEAIGDIEESALNGIVVAKDQPELAEALRAAVQHLIDTGHME 288


>gi|206580801|ref|YP_002238839.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           pneumoniae 342]
 gi|206569859|gb|ACI11635.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella
           pneumoniae 342]
          Length = 276

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 62/232 (26%), Gaps = 15/232 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           ++ G +  G +     +  +  N    GFD++    L+  +  +   I            
Sbjct: 29  QQSGKITAGSDMTFFPYEYM-ENNKPAGFDIELLDGLAKTMGREAVNID---TRFPNLIP 84

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASI 148
            LQ  + DI + +   T  R   + +         G+  +  K       +     G  I
Sbjct: 85  GLQGGRFDITNSSMYITAERLKVIDM---VPYLKSGEAILARKGGDYQPKTPEAFCGHKI 141

Query: 149 CVQAGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
                T+    L         K         V+    +   A  +   DA   D +    
Sbjct: 142 GSMGATSWLAQLQKLSTDYCVKKGLKPIALSVYTTDPQTTQALLSRAVDAQITDAAVARG 201

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +          +    +I        + +G+TE    +           E  
Sbjct: 202 VVEKLGD-RVVISSDTLIYPVLNGFGVKKGNTEVKTALEEALKKYSATPEYA 252


>gi|187932188|ref|YP_001892173.1| polar amino acid uptake transporter [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|290953481|ref|ZP_06558102.1| ABC transporter, perplasmic component [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295313279|ref|ZP_06803916.1| ABC transporter, perplasmic component [Francisella tularensis
           subsp. holarctica URFT1]
 gi|187713097|gb|ACD31394.1| polar amino acid uptake transporter [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 232

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/180 (11%), Positives = 48/180 (26%), Gaps = 10/180 (5%)

Query: 36  LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +  G       F+     +  + G D+    A +    +   +++++  +       L+S
Sbjct: 9   ITVGTTGDYAPFSVYNPKDNKYSGKDIKLIEAFAK---NKKEQVKFVKTSWATAENDLKS 65

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D+       T  R+     +   I++         K     + + +      V    
Sbjct: 66  NKFDVFVGGMTITPERQKEFVFSNPLISFNKAAMTACKKLNKYKTFNDIDNPKTLVIENR 125

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
                +    K  N K   I      +   +          D    D   +      N +
Sbjct: 126 GGTNQVFALQKLKNAKVLIIS--DNNQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 183


>gi|117926468|ref|YP_867085.1| PAS/PAC sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
 gi|117610224|gb|ABK45679.1| multi-sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
          Length = 1075

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/211 (9%), Positives = 58/211 (27%), Gaps = 9/211 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +   +         +  +G  +G  +D  + ++       +    +  N  +    ++  
Sbjct: 29  VTVAVLQDFPPLYSLDTHGKPQGLAIDLLQQVAQQAQLKITYK--VVQNWGQAMQLVRQG 86

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           + D +      T +R      +           F+  + + I  +  L G S+ V A + 
Sbjct: 87  EADFV-PGIGITEVRRAEFLFSHPME-SVPVSCFVRKQNRSIQGLQDLPGYSVGVIAQSA 144

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               L+             +++ ++E      A   DA+      +              
Sbjct: 145 AHTRLSQI-----PNMRLKLYQSIDEAFFQLLAGELDAFVTSRPVMEKKARKIAPQEMIK 199

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           ++ + +        +   +      +     
Sbjct: 200 VVGEPLMDLKRGYLLSTQNRALLQRIDPIIQ 230


>gi|163749012|ref|ZP_02156263.1| GGDEF family protein [Shewanella benthica KT99]
 gi|161331388|gb|EDQ02276.1| GGDEF family protein [Shewanella benthica KT99]
          Length = 201

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 12/192 (6%)

Query: 2   YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
            K  F   L   +L  ++ ++ N   +   K +  L    +     F+ + ANG+ +G  
Sbjct: 18  KKSLFFFALFSYLLATSASASENGQDIKSTKHKKQLTIANSKAWKPFSYIDANGEPQGLL 77

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +  +     +  ++ ++  +  E   A++SK+ D +     W+  RE    L F P
Sbjct: 78  IDIWKEYAR---VNNVEVSFVLTDWNESLQAVKSKEAD-IHAGLLWSEHRETY--LDFLP 131

Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F   K  G    S L    + V +    E  +  ++         I F   
Sbjct: 132 GIVEIDTQLFFSSKLWGTDVDSYLESGRVGVVSAGYEETYMMQHYPK----VKLIAFGNN 187

Query: 180 EEIDAAYRAHRC 191
           E +  +  +   
Sbjct: 188 ELMLKSAFSGET 199


>gi|113969486|ref|YP_733279.1| extracellular solute-binding protein [Shewanella sp. MR-4]
 gi|113884170|gb|ABI38222.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           MR-4]
          Length = 292

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 79/239 (33%), Gaps = 11/239 (4%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F  IL L I  F +F   +  +  +     L+ G N     +A     G+ +G DV+  R
Sbjct: 9   FSHILLLCIFIFPTFGAPSEAVVSVCLN-PLRVGYN-DWPPYAWRDQQGEAQGLDVELLR 66

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A +  +  +   + ++ + AK     L+S  +D++      T  RE     +        
Sbjct: 67  AFAEHLGCE---VIFINVPAKRSHQMLKSGSLDMMMGA-TKTAKREEYALFSAAYRDEEV 122

Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTL--ADYFKAHNMKYHPIVFERVEE 181
               +  KK  I       +    + +    +    +      +    ++  I+    ++
Sbjct: 123 RLFVLDEKKDKIQLTQWQDIFSQKLRLLVPISGWYGVDYEQTRQRLEQEHLLILSPDADK 182

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                   R D   GD  A+     +  +      L  ++ ++ +     +  +    +
Sbjct: 183 SVQMLTYGRADLIIGDSMAMP-YIASQHQGVRLSSLKPVLDRNQIHLMFSKQTSSSSRV 240


>gi|260460037|ref|ZP_05808290.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mesorhizobium opportunistum WSM2075]
 gi|259034248|gb|EEW35506.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mesorhizobium opportunistum WSM2075]
          Length = 283

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 82/261 (31%), Gaps = 9/261 (3%)

Query: 1   MYKDFFVS-----ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   ++      L  ++   T+ S + S L  +K +GF +  I      +  V A+G 
Sbjct: 1   MKKFGILAGVAGLALTAVLAASTAGSADDSKLEQLKSQGFARLAI-ANEPPYTAVAADGK 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G   D  R +   +    + +             LQ+ + D+++        R  ++ 
Sbjct: 60  VSGAAPDVAREIFKRLGV--ADVVASISEYGAMIPGLQAGRFDVVTAGLFMKPERCAAVA 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +   +   +         KG  S   ++  +                  A   +   IV
Sbjct: 118 YSEPVLCDAEAMLVKKGNPKGFKSYEDVAKDTSATIGAPGGGTEEKLALNAGVPRDRVIV 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234
               +      +  R DAY+  + ++  L    + PS  VI P   +       A  +GD
Sbjct: 178 VPDGQSGLKMVQDGRIDAYSLPVLSINDLMKKANDPSLEVIAPVQGAPVYCDGAAFKKGD 237

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
               +        M  + E  
Sbjct: 238 EALRDAFDVELAKMKKSGEFA 258


>gi|88603209|ref|YP_503387.1| putative PAS/PAC sensor protein [Methanospirillum hungatei JF-1]
 gi|88188671|gb|ABD41668.1| periplasmic ligand-binding sensor protein / PAS/PAC sensor protein
           [Methanospirillum hungatei JF-1]
          Length = 598

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 25/273 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGLVGFAEV 50
           +   + +L +++        NA              L  I     ++   +     F  +
Sbjct: 21  RSHLILVLFIVLSGIGICGVNADPSYDTALSLIPEELEWISAHPVIRICPDPHYPPFEML 80

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            ++G ++G   D  R ++         +     N  +    ++++++DIL      + LR
Sbjct: 81  TSDGGYQGISADLLRIIAERAGLTLEVVP--CENWSQCIEKIRNREVDILGAVF-ISDLR 137

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
              L     P      +    +      +++ LSG S+ V  G T+ L L  ++      
Sbjct: 138 SGYLSYT-DPFYSSPLEIITKNTAPSDLTLADLSGKSVAVVDGYTSHLLLVTHYP----D 192

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPL 226
            H +V   V            DA+ GD+ A  A        +   I  +          L
Sbjct: 193 IHTVVVPDVPSGLEKVVFGSADAFLGDL-ATAAYHTEKSGFTNLQISGEGSFANNTLQSL 251

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           A  I        +I++   + +  AE+  I   
Sbjct: 252 AFGIRSDQPVLVSILNKGLHTLSDAEKKRIFST 284


>gi|312113343|ref|YP_004010939.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218472|gb|ADP69840.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 350

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 71/257 (27%), Gaps = 19/257 (7%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72
                +    +LG IK  G +  G       F+   A+ +  GF VD C  ++  +    
Sbjct: 58  SLAVATAEGGVLGKIKAAGAITLGYREAAAPFSYA-ADQNAAGFAVDLCGLVADKVKEKL 116

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             P               AL SK+   +                   P+   + +  +  
Sbjct: 117 ALPELKVVWRATTDADRAALASKRDIDIDCAATPDKATLDDAAEFSAPVYASELRFVVPS 176

Query: 133 K--------------KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           K               K  +++  L G ++ +  G+     +        +       + 
Sbjct: 177 KLRPEAEGFRRRRADFKTPAAIDDLKGKTVVLLQGSPGLPYVLGQSVERYLGISVAYAKT 236

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E           AY  D + L  LK     P   ++L      +  A  + + +    
Sbjct: 237 PAEAFKLVETGAAAAYLDDDAVLIGLKAGAKSPDAFLLLGTGKPGADYALVLPKDEP-LK 295

Query: 239 NIVSWTHYAMVTAEELG 255
           ++        V + E  
Sbjct: 296 DLADAAIRDAVKSGEYE 312


>gi|110679456|ref|YP_682463.1| amino acid ABC transporter, periplasmic-binding protein, putative
           [Roseobacter denitrificans OCh 114]
 gi|109455572|gb|ABG31777.1| amino acid ABC transporter, periplasmic-binding protein, putative
           [Roseobacter denitrificans OCh 114]
          Length = 269

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M+K   +SI+  +I    + + +      I   G L     N     +    A    +GF
Sbjct: 1   MHKVLAISIIASMIAVGGAQAQSCHEGKTI-SAGKLTIATGNPAYYPWVLDDAPESGQGF 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLA 117
           +     AL+  +      + +   +      A+Q      D+  +    T  R+    + 
Sbjct: 60  EAAVAYALAGKMGFMQEDVIWTRTSFD---QAIQPGAKDFDLNMQQFSITAQRDKV--VD 114

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F    Y      ++    G+++    L      V A TT    + +       +  P+++
Sbjct: 115 FSAPYYTAPMAVLVRGGDGLTADMATLKRLKWGVVATTTALPVVMEKIA---PESPPLIY 171

Query: 177 ERVEEIDAAYRAHRCDA 193
           +    +  A +A + DA
Sbjct: 172 DDNVNVVEAMKAGQIDA 188


>gi|10954674|ref|NP_066609.1| hypothetical protein pRi1724_p029 [Agrobacterium rhizogenes]
 gi|10567338|dbj|BAB16147.1| riorf28 [Agrobacterium rhizogenes]
          Length = 279

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 64/223 (28%), Gaps = 33/223 (14%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L+ +  ++ +            G L+     G   +     +G  KGF+
Sbjct: 1   MNKLSGILTAALMTVATSAMAQE----------GELRVVTEGGFAPWNLTDPSGAVKGFE 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF  A+   +     K  +          A+   + D +      T  R+    + F  
Sbjct: 51  IDFMNAVCGEL---KMKCTFTAQAFDAMIPAVNDGKFDAIVDALGVTAARKEV--IDFST 105

Query: 121 ITYFDGQGF------IMHKKKGISSVSQLSGASI------------CVQAGTTTELTLAD 162
                   F      +  K      +  L+ A++              + GT    T   
Sbjct: 106 PYAALCYSFASVNADVKKKLPFEDRIEILTDANLEANMARFKTAFEGAKVGTLASGTSTR 165

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           +   +        ++     +   +A R D        L ALK
Sbjct: 166 FIAKNLAGVATSPYKTPAARNLDLKAGRVDILLASKDNLLALK 208


>gi|326409951|gb|ADZ67016.1| Bacterial extracellular solute-binding protein, family 3 [Brucella
           melitensis M28]
 gi|326539667|gb|ADZ87882.1| amino-acid ABC transporter-binding protein patH precursor [Brucella
           melitensis M5-90]
          Length = 101

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+K   ++I  L +    S        + L  I++   +  G       F  VK +    
Sbjct: 1   MHKKKILAIALLGVCCAISTVAPGMAETTLEKIQRTKKVTVGTEAAYPPFEFVKDD-KIV 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
           GF  D    ++        +++ L L  +     L + + D ++
Sbjct: 60  GFGRDLLDEIAKQ---WGVEVEQLDLPFQGILPGLIAGKFDFVA 100


>gi|152998035|ref|YP_001342870.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150838959|gb|ABR72935.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 262

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 20/258 (7%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVD 62
                +L +  +  +S S  A  L D+K R  L             V    G+  G++ D
Sbjct: 3   SLLSRLLVIAAVSISSLS-FADSLPDLKGRTILAV-TENAYTPLNFVDPATGEGIGWEYD 60

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +   +    +KI++   +      A++  Q D+          R     + F    
Sbjct: 61  AMNEIGKRL---NAKIEWHISSWDTMIQAIKQGQYDVGMDGITINEERAE--QIDFTLPY 115

Query: 123 YFDGQGFIMHKKKGISS-----VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               Q  ++   +   +      +            T   + + D            + E
Sbjct: 116 MTSQQFMLVRADEDRFNDAKSFAADPDLQFGAQAGTTNFYVAVYDVLDGDENNPRITLLE 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  A ++   D+   D ++          P    I+   +        + +G    
Sbjct: 176 TFGASVQALKSGDVDSVLMDAASARGYI--GANPGAFKIVGGPLGSEDFGFILAKGSDLV 233

Query: 238 YNIVSWTHYAMVTAEELG 255
             I      A + + E  
Sbjct: 234 KPI-----NAAIESMEKD 246


>gi|258620045|ref|ZP_05715085.1| transglycosylase, Slt family [Vibrio mimicus VM573]
 gi|258625207|ref|ZP_05720120.1| transglycosylase, Slt family [Vibrio mimicus VM603]
 gi|262172116|ref|ZP_06039794.1| transglycosylase Slt family [Vibrio mimicus MB-451]
 gi|258582497|gb|EEW07333.1| transglycosylase, Slt family [Vibrio mimicus VM603]
 gi|258587778|gb|EEW12487.1| transglycosylase, Slt family [Vibrio mimicus VM573]
 gi|261893192|gb|EEY39178.1| transglycosylase Slt family [Vibrio mimicus MB-451]
          Length = 526

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 71/228 (31%), Gaps = 23/228 (10%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 33  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 90

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                           + +  + 
Sbjct: 91  S--LFPALKNGEVDIIAAGLSQSEERLKGFRAGPAYYYVSQQVVYKKGEWRPRNFKQLVE 148

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHR 190
            ++  +     L+  S  V   +  E TL    + H + ++H      V ++        
Sbjct: 149 KQQALLKDNPDLAFFS--VVDDSHFEHTLQAKQQKHPDFQFHVDSNSDVNDLLKKVSQGE 206

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +T   S   +L        +     ++    P++  I + D E  
Sbjct: 207 L-LFTMADSVEVSLSQRVY--PDLAAAFELTEDQPISWFIRRADDESL 251


>gi|225575187|ref|ZP_03783797.1| hypothetical protein RUMHYD_03276 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037595|gb|EEG47841.1| hypothetical protein RUMHYD_03276 [Blautia hydrogenotrophica DSM
           10507]
          Length = 277

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 6/102 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +  G L    N     +   +   D  G D DF +A++  +  D   ++   +       
Sbjct: 181 RSNGTLVMATNAEFPPYEYYEGE-DIVGLDADFAQAIADKLGMD---LKIEDMAFDSIIP 236

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           A+ S + D  +     T  RE    + F    Y   Q  I+ 
Sbjct: 237 AVTSGKADFGAAGMTVTEERE--QQVLFSDTYYTARQVIIVK 276


>gi|29831773|ref|NP_826407.1| ABC transporter substrate-binding protein [Streptomyces avermitilis
           MA-4680]
 gi|29608890|dbj|BAC72942.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 308

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 59/199 (29%), Gaps = 16/199 (8%)

Query: 8   SILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++  +      S    A        L  ++ RG ++ GI      +  +  +G   G   
Sbjct: 31  TVGTVGATSGCSRVATADTGDGGHLLEQLRARGTVRLGIAGEQ-PYGYIGKDGRVTGSAP 89

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
                + + +  D   ++  P +       L S Q D+++     T  R     + F   
Sbjct: 90  VIATRIFNELGID--HVEPFPTDFGSLIFGLNSLQFDVVAAGMYITPER--CGQVVFADP 145

Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            Y     FI+ K     + + + L  +   V  G        DY K   +          
Sbjct: 146 EYQMKDAFIVRKGNPLKLRTYADLGRSKARVATGIGYAEI--DYIKEAGV-RKVDTLPDQ 202

Query: 180 EEIDAAYRAHRCDAYTGDI 198
                A    R D + G  
Sbjct: 203 LAGLLAVEQGRVDVFVGTA 221


>gi|307942176|ref|ZP_07657527.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4]
 gi|307774462|gb|EFO33672.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4]
          Length = 293

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 56/190 (29%), Gaps = 17/190 (8%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ---- 79
              L DI  RGF+K  +      F+     G  KG D+D  R ++  +  +   I     
Sbjct: 38  GRSLDDILDRGFIKIAVYEDFPPFSYR-EKGVLKGVDIDVGRLIAEDLGVEARFIPTAAD 96

Query: 80  ---YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR---PITYFDGQGFIMHK 133
                 L        L   QI  +         RE+             Y +        
Sbjct: 97  ENVDGDLRNNVWRGKLIGGQIANVM--LHIPYDRELGCRNEQVVLNGQYYNEQMAIAYRP 154

Query: 134 KKGISSVS---QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           K               ++ V+  T  +  L+  F    M  +   F+  EE  +A  A  
Sbjct: 155 KDYPEDPPVAAYFRFDTVGVENDTLADFYLS-NFAGGQMLKNIHRFKTHEEAMSALAAGE 213

Query: 191 CDAYTGDISA 200
             A  G +S 
Sbjct: 214 VMAVMGPLSQ 223


>gi|317152361|ref|YP_004120409.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942612|gb|ADU61663.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 287

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 85/260 (32%), Gaps = 24/260 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGIN-TGLVGFAEVKANGD 55
           K   V++  +++L  +     A          +I ++G L+ G+       F   +A+G 
Sbjct: 12  KVVLVNLFAILLLGGSPSFLFAEETGHMRTPSEILEKGVLRVGMYYQDKPPFVMTRADGS 71

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G D+D    ++ A+  +    +     A+        +  DI+      TL R + + 
Sbjct: 72  LYGVDIDIANGIAQAMGVEVVFDRTSKTYAELTERMSTGEDFDIVICKLSQTLSRALMVR 131

Query: 116 LAFRPITYFDGQGFIMHKKKGISS-------VSQLSGASICVQAG--TTTELTLADYFKA 166
             F        QG  ++K     +       +  L+  +  V A   T+        F  
Sbjct: 132 --FTKPYLVFHQGLALNKTFISKNKLTNNSLIVDLAKMNFKVGARYSTSYVEYAQTVFPN 189

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSP 225
                  ++    EE+         D    D   L +L       + ++ +  I   + P
Sbjct: 190 AK-----VIEGEWEELVEKLLRGEIDGLMRDEFTLMSLVRERPDVALYLNIYRIKDMQDP 244

Query: 226 LAPAIIQGDTEWYNIVSWTH 245
           +A A  Q ++     +    
Sbjct: 245 IAIATAQSNSMLQYWLDLYL 264


>gi|27366949|ref|NP_762476.1| extracellular solute-binding protein [Vibrio vulnificus CMCP6]
 gi|27358516|gb|AAO07466.1| Extracellular solute-binding protein, family 3/GGDEF domain protein
           [Vibrio vulnificus CMCP6]
          Length = 457

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 83/250 (33%), Gaps = 23/250 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +L   ++   S   +A      ++R  L+   +     F+ +  +G  +G  
Sbjct: 1   MMKKSAILLLAFSLIGLFSIFVSA----KEQERKTLRVTNSKAWKPFSYLAEDGSPRGIL 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D  +        D   I+++ ++  +   A++  + D+      W+  RE  L   F  
Sbjct: 57  IDLWKLYGEQNGVD---IEFVLVDWNDSLTAVEEGKADVH-AGMLWSEPRE--LRFDFAE 110

Query: 121 ITYFDGQGFIMHKKKGISSVSQL----SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                     + ++   + ++          + V  G   E  +  +F         + F
Sbjct: 111 PIMTINTQLYLSQRIITTDLNFFLTGDGNRGVGVVEGGYEEYFVQTHFPK----LPLVRF 166

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-----PSEHVILPDIISKSPLAPAII 231
           +    +  A      DA+  D+        T  +     P+ ++   +I        A++
Sbjct: 167 KNNRLMMEAAFREEIDAFVADLQVANFYIYTTAQTVTFIPALYLYSGEIRPAVAEGSALL 226

Query: 232 QGDTEWYNIV 241
                 + +V
Sbjct: 227 STINAGFKVV 236


>gi|54296084|ref|YP_122453.1| hypothetical protein lpp0102 [Legionella pneumophila str. Paris]
 gi|53749869|emb|CAH11250.1| hypothetical protein lpp0102 [Legionella pneumophila str. Paris]
          Length = 242

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 82/248 (33%), Gaps = 28/248 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +  F+ ++ L    F                  +  G+      F      G+ + GF
Sbjct: 1   MKRFMFILLIFLNFHAFG---------------KPIIIGVPEFAPPFVSRSGGGEFYFGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   ++   I     + QY  +N ++ + +L + ++DI+   T      +      F 
Sbjct: 46  NIDLMNSICKII---EEECQYKGMNIQQLYTSLNAGKVDIMLAPTPIVSTGDT--NYIFS 100

Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                     I       I+++  L G  +     T     L ++F      +  + F +
Sbjct: 101 LPYLPSNAQVITLKANDNINTLMDLKGKKVGTLKYTLYGGLLQEHF---QDFFDLVEFSK 157

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237
           + ++  +    + +A   +     A    ++  +E  ++ D I   +      ++ +   
Sbjct: 158 LSDMALSLSNQKIEAIVLNAH--AAKYAMSNSATELKMVGDQIPIGNGYGILALKNNAPL 215

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 216 IMKINKAL 223


>gi|117925030|ref|YP_865647.1| diguanylate cyclase [Magnetococcus sp. MC-1]
 gi|117608786|gb|ABK44241.1| periplasmic/7TM domain sensor diguanylate cyclase [Magnetococcus
           sp. MC-1]
          Length = 464

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 86/277 (31%), Gaps = 14/277 (5%)

Query: 3   KDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           K+    +L L           A    S    I++ G     ++     F ++ A G   G
Sbjct: 8   KNIIFFMLALAHFCLAKPGVGAELSLSEREYIQQHGPFTFCVDPDWPPFEQINAQGVHVG 67

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
              D  R  +         +  +    ++   A Q     +L    + T LR+    L F
Sbjct: 68  IAADLLRLAAERAKIPLKLV--VTQEWQQSIQASQRGDCQML-SFLNQTPLRDAW--LVF 122

Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               + D    I   +   I  ++ ++  ++ +  GT+ E  +   F     +   ++ E
Sbjct: 123 TVPIFVDRNVIITREEHPYIEDLAAVNHQTMVLPKGTSMEERVRKDFP----QLTILLAE 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E  A     + D     +             +  +       ++ L   I +     
Sbjct: 179 SESEAFAMVSKKKADMTMRSLMVAIDTIKKEGWFNLKIAGQIPGYENHLRVGIRKEAAPL 238

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            ++++     +  AE   +  ++++   +   +  + 
Sbjct: 239 KDMLNRGIKEISLAERAEVANRHVSIQVQSGIDYGLM 275


>gi|323492404|ref|ZP_08097554.1| membrane-bound lytic transglycosylase F [Vibrio brasiliensis LMG
           20546]
 gi|323313365|gb|EGA66479.1| membrane-bound lytic transglycosylase F [Vibrio brasiliensis LMG
           20546]
          Length = 516

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 75/259 (28%), Gaps = 29/259 (11%)

Query: 1   MYKDFF-----VSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K +      +S+L    L  +     +   S L  IK+RG L+ G     + +  +  
Sbjct: 1   MKKHYLNQIKSLSVLLFSALVLSGCQIESEPKSELDLIKERGVLRVGTLNNQLSY-YIGP 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G D +  R  ++ +           +++     AL++ +IDI++     +  R  
Sbjct: 60  DG-PAGLDYELAREFANELGVQLEMKPAYRISSLY--PALENGEIDIIAAGLSQSPERLK 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA----------- 161
                     Y   Q           ++ QL      +      E  L            
Sbjct: 117 LFR-PGPAYYYVSQQVVYKKGSWRPRNLEQLLKKQAELIEENGGEDVLKIVSDSHFNRTL 175

Query: 162 --DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
                K     Y       V ++     A        D   +   +       +  +  +
Sbjct: 176 SSIQAKQPEFSYDIDANADVNDLLKQVSAGELRYTVADSVEISLSQRIYP---DIALAFE 232

Query: 220 IISKSPLAPAIIQGDTEWY 238
           +    P++  + +   E  
Sbjct: 233 LTEDQPISWFLRRSQDESL 251


>gi|262165122|ref|ZP_06032859.1| transglycosylase Slt family [Vibrio mimicus VM223]
 gi|262024838|gb|EEY43506.1| transglycosylase Slt family [Vibrio mimicus VM223]
          Length = 526

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 71/228 (31%), Gaps = 23/228 (10%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 33  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 90

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                           + +  + 
Sbjct: 91  S--LFPALKNGEVDIIAAGLSQSEERLKGFRAGPAYYYVSQQVVYKKGEWRPRNFKQLVE 148

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHR 190
            ++  +     L+  S  V   +  E TL    + H + ++H      V ++        
Sbjct: 149 KQQALLKDNPDLAFFS--VVDDSHFEHTLQAKQQKHPDFQFHVDSNSDVNDLLKKVSQGE 206

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +T   S   +L        +     ++    P++  I + D E  
Sbjct: 207 L-LFTMADSVEVSLSQRVY--PDLAAAFELTEDQPISWFIRRADDESL 251


>gi|255528451|ref|ZP_05395245.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
 gi|255507857|gb|EET84303.1| extracellular solute-binding protein family 3 [Clostridium
           carboxidivorans P7]
          Length = 182

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 9/166 (5%)

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139
           +P +     LAL+S + +++  +   T  R+    + F       GQ   + K    I S
Sbjct: 1   MPTDWNGIILALKSGKFNMILSSLSMTEERKK--EIDFAGPYLEGGQIIAVKKSNNDIKS 58

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++  Q G+T E                  +++  E        R +A   D  
Sbjct: 59  SADLKGKTVGCQLGSTGEQAANKIQGIK----ELKKYDKGTEAFHDLAIGRVEAVIMD-- 112

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                           IL + ++K P    I + D E    +    
Sbjct: 113 GQVGGYYNKKDGDAFKILGEKLTKEPEGIGIKKEDKELKEKLQKAL 158


>gi|118470622|ref|YP_889611.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171909|gb|ABK72805.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 311

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 21/265 (7%)

Query: 2   YKDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAEVK 51
            +      +   ++   + ST            S L  IK    +  G       +A   
Sbjct: 23  RRTLLACAMSFAVVAVGACSTTEPGTGNPGGEGSTLDRIKADKKINVG-FANERPYAYR- 80

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG   G D      + + I     +             AL S+++D+++     T  R 
Sbjct: 81  ENGQLVGEDPAIHGHIFNEIGGITLEPHLF--EFGSLIQALNSERVDVVTAGMFITPQR- 137

Query: 112 ISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                AF  P+        +        S            A     + +     +    
Sbjct: 138 -CEQAAFSNPVYVATTSLLVPSGNPKGLSDYASVANGDARLAVMNGAVEVEQAKGSGVPD 196

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYT-GDISALYALKLTNDRPSEHVILPDIISKSPLA-- 227
               +    +    A +  R DA+    IS        N        +P I  K  +   
Sbjct: 197 DRLQIVADQQAGLDAVKTGRADAFALTSISLRALAANDNSVEVADAFVPVIDGKEQVGAG 256

Query: 228 -PAIIQGDTEWYNIVSWTHYAMVTA 251
                + DT      +     ++ +
Sbjct: 257 AAVFRKNDTALREAFNEKLAELIQS 281


>gi|327395222|dbj|BAK12644.1| cystine-binding periplasmic protein precursor FliY [Pantoea
           ananatis AJ13355]
          Length = 299

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 68/231 (29%), Gaps = 19/231 (8%)

Query: 34  GFLKCGINTG-LVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L    +       A + A+     G D D  R L+ ++     K++ +P + ++  L 
Sbjct: 54  GTLTVATSATHSPPLALLAADNVTRIGSDPDIARLLADSLG---LKLKLVPASWEDWPLG 110

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASI 148
           + + + D+   N   T  R+      F      D   F +     I   +S   ++G  I
Sbjct: 111 ISAGRYDVAMFNIAVTEERKK--KFDFA-TYRADNHAFAVKADSPISAITSPPDVAGKRI 167

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K      PI             + R DA  G  +     
Sbjct: 168 IVASGTNQERILLSWDAQNRAKGLPPVTPIYLTDDASATLYLLSGRADAMFGPHAVAAWK 227

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +  +      L              +        +       +   +  
Sbjct: 228 VASRGQ----TKLVGEGPYRAWVAVTTKKGNGLAAALQTALDGTIAGGQYR 274


>gi|225867997|ref|YP_002743945.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701273|emb|CAW98256.1| extracellular solute-binding protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 275

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 20/257 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K         L  L   +  TN  +    K+   ++   +     F          G+
Sbjct: 1   MTKQLQRALFFLLASLGLLAVVTNHEVTARQKE--VIRVATDAATKPFTYR-KKHSVTGY 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  + +         ++    +        + + +  I + N      +E +    F 
Sbjct: 58  DIEVLKRVFK--GSKKYRLSIEVVPFPSILAGIDAGRYQIGANNFG--YSKERAEKYLFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                         K+   S++ LSG      AG+T  L L  + ++H     PI     
Sbjct: 114 SPISASHYALATKGKQQYKSLADLSGKKTQGIAGSTYMLILEKWNQSH-PDQKPIHLTYA 172

Query: 180 EEI------DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAP 228
            E              + D    D  +L  +            L +              
Sbjct: 173 SESTPLTQRLQLLENGQLDFLFYDAISLTTVAEEQGFDLHVTKLKEQADTAKDGLEYYVF 232

Query: 229 AIIQGDTEWYNIVSWTH 245
           A  Q        V+   
Sbjct: 233 ANDQKGKALQRFVNKRL 249


>gi|117920397|ref|YP_869589.1| diguanylate cyclase [Shewanella sp. ANA-3]
 gi|117612729|gb|ABK48183.1| diguanylate cyclase [Shewanella sp. ANA-3]
          Length = 937

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 59/185 (31%), Gaps = 10/185 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G LK G              G + G + D  + L+  +  +   + +   +      AL+
Sbjct: 500 GELKLGYLKQWPPMEFSDEQGQFAGINSDVSQLLAEQLRINIQPVAFD--DWHSLIGALR 557

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQA 152
           S +I +           E    L F    +    G +   ++  + +++QL+G  + V  
Sbjct: 558 SGEIALAG---SIAQTAERQQFLTFSEPYWPSPWGLVSQLEQVSVFNLAQLAGQRVAVVE 614

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G      L     A       ++    +   +A      D +   +  L +   T   P 
Sbjct: 615 G----YHLVAQLMALQPSLKLVLVPDTQSGLSAVNDGHADVFIDKVVTLASELKTGQYPL 670

Query: 213 EHVIL 217
             + L
Sbjct: 671 LKMSL 675



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 89/293 (30%), Gaps = 39/293 (13%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + ILC I +     ++             L   +      +  V  +G+  G 
Sbjct: 1   MKLVLQLIVILCCIFINNAVNASQGQTES-------LIVVMGEDSFPYQFVDNDGEATGL 53

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  +          + + ++  +  E    LQ  +  +       T  RE      F 
Sbjct: 54  LVDLWKEWGKRT---NTPLVFVARHWNESLQQLQQGKAQVHI-GMGQTPERE--QLFDFA 107

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      +HK  +G  S+ +L    I + +G++ E  L            P +  +
Sbjct: 108 EPIADVSTYLYLHKSLQGKKSIKELIPYQIGIVSGSSHEAELRRI--------EPNLVFK 159

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      A       G+      L      P+    +       P++  I     ++ 
Sbjct: 160 YYESREKLLAG---VAAGETVVFAGLDGYLRDPASSQAIAGSF---PISARIPIKAMQFV 213

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
             V   + A+V  E++     +++      T    +R+LG       G+  GL
Sbjct: 214 PAVMKGNQALV--EKINQGFHSLDARFVQQTE---RRWLGY-----HGQKAGL 256



 Score = 39.3 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 12/213 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +K G L   +  G+  F ++  +G   GF VD  +  S+    +   + ++  +      
Sbjct: 252 QKAG-LVVAMQLGVEPFVDLGVDGLPHGFYVDLWQLWSAKTGIN---VDFISGDMNASVN 307

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            ++    D       +    E+  GL      Y       +++ + ++ +  L G  I V
Sbjct: 308 DVRQGLADAHIG---YPESDELKTGLTRAWQLYTVKSRLFLYQ-QQLTDLQSLKGKRIGV 363

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  + L               +E ++ + A  R+     +    +      L N  
Sbjct: 364 VPTAPYLVALRKALP----DVTLRYYENMDSMVAGARSGEIAGFVAAGAWTSHYLLQNKA 419

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            SE    P++   + +       D      ++ 
Sbjct: 420 WSEFHQYPELEFPTDVYVLTRSDDPGLTQRITN 452


>gi|294498361|ref|YP_003562061.1| putative amino acid ABC transporter amino acid-binding protein
           [Bacillus megaterium QM B1551]
 gi|294348298|gb|ADE68627.1| putative amino acid ABC transporter, amino acid-binding protein
           [Bacillus megaterium QM B1551]
          Length = 281

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 77/251 (30%), Gaps = 13/251 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKANGDWKGF 59
           M K +F     + ++      + +S   +   +  +K  ++  +   F       +  G+
Sbjct: 1   MKKLYFTLAFAIGLIMALGGCSQSSSSEN-SDKKVVKVALSDEVNPPFLFTNDQNEPIGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D+ + L   +     K +Y     +   + + + + D           RE        
Sbjct: 60  DMDYLKQLEKKL--PEYKFEYTLGEEETNLVGVSTGKYDFAINWFFKNPEREEKFLYP-A 116

Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTE-LTLADYFKAHNMKYHPIVFE 177
               +     +  K +  I ++  +        + T      L  Y K H  K   +   
Sbjct: 117 HEYGYSLTALVTQKSRNDIKTLDDMVDKKFPPVSATGGLRAILNAYNKEHATKPLTLESI 176

Query: 178 RVE---EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                 E        + DA   +++    ++        ++ +  I+SK P      + +
Sbjct: 177 DNPSTAENLKLVDKGKADAIFLNVTTFNEVQKQLK---LNLKVGGIVSKEPTWLVFNKNN 233

Query: 235 TEWYNIVSWTH 245
            +  + +    
Sbjct: 234 QKLADEIDKAT 244


>gi|254423210|ref|ZP_05036928.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
 gi|196190699|gb|EDX85663.1| Bacterial extracellular solute-binding protein, family 3
           [Synechococcus sp. PCC 7335]
          Length = 280

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 77/278 (27%), Gaps = 35/278 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFST-----NASILGDIKKRG-------FLKCGINTGLVGFA 48
           M + +F+  L L  +     S       A ++ +  ++G        L          + 
Sbjct: 1   MKRRWFLVGLTLPFVSAGCRSAEQSNPAAEVVTEGSQKGSPDIDTDTLVMATTPNYPPYE 60

Query: 49  EVKANGD----------WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
            + +  +            GFD+D  R +++ +    S I    L   E  LAL   + D
Sbjct: 61  LIVSKQNAGDSAQAEPNIVGFDIDLARLIAARLGKQLSVID---LPFDELLLALTEGKAD 117

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
           I          R     + F  I Y      +     G      L   +I V  G+    
Sbjct: 118 IAMAALA--PSRSRKQIVDFSNIYYRSRHTLV--SIDGYLRSRDLGYQAIGVHNGSVQAR 173

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
                        +   ++ + ++  A           + +               V+  
Sbjct: 174 FAQRLTDEL-PGLYIEYYDSLTQLFDAVDVGEISGAIVEANLADNYLKRYADIQARVMPV 232

Query: 219 DIISKSPLAPAII-QGDTEWYNIVSWTHYAMVTAEELG 255
           +     P   AI    ++     ++     +  + E+ 
Sbjct: 233 EG----PTGSAIALPQNSPLRRDINTALSDIKASGEMD 266


>gi|163733598|ref|ZP_02141041.1| amino acid ABC transporter, periplasmic-binding protein, putative
           [Roseobacter litoralis Och 149]
 gi|161393386|gb|EDQ17712.1| amino acid ABC transporter, periplasmic-binding protein, putative
           [Roseobacter litoralis Och 149]
          Length = 287

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M+K   +SI+  +I    + + +      I   G L     N     +    A    +GF
Sbjct: 19  MHKVLAISIIASMIAVGGAQAQSCHEGKTI-SAGKLTIATGNPAYYPWVLDDAPESGQGF 77

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLA 117
           +     AL+  +      + +   +      A+Q      D+  +    T  R+    + 
Sbjct: 78  EAAVAYALAGKMGFMQGDVIWTRTSFD---QAIQPGAKDFDLNMQQFSITEQRDKV--VD 132

Query: 118 FR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F  P         +       + ++ L      V A TT    + +       +  P+++
Sbjct: 133 FSLPYYTAPMAVLVRGADGLTADMATLKRLKWGVVATTTALPVVMEKIA---PESPPLIY 189

Query: 177 ERVEEIDAAYRAHRCDA 193
           +    +  A +A + DA
Sbjct: 190 DDNVNVVEAMKAGQIDA 206


>gi|209694337|ref|YP_002262265.1| membrane-bound transglycosylase [Aliivibrio salmonicida LFI1238]
 gi|208008288|emb|CAQ78434.1| membrane-bound transglycosylase [Aliivibrio salmonicida LFI1238]
          Length = 494

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 77/246 (31%), Gaps = 18/246 (7%)

Query: 4   DFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
               S L +  L FT           + L  +++RG L+          +    +    G
Sbjct: 8   RLLKSCLVISTLVFTLTGCQVESEPKTKLEQVRERGILRVSTLNNQ--LSYYIGSNGPTG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D D  +A +  +                 F AL   ++DI++ N   T  R  +     
Sbjct: 66  LDYDLAKAFAEKLNVKLEITP--AYTYSGLFPALNRNELDIVAANMTITPERLENFRT-- 121

Query: 119 RPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            PI Y+  Q  +  K       I ++++L      V+  +     L    K   +++   
Sbjct: 122 GPIYYYVSQQVVYKKGNWRPRNIKNLTELDENLTIVKDSSFEGTLLKLKEKYKKLEWSTE 181

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
               V E+           YT   S   +L        +  +  ++    P+A  + + +
Sbjct: 182 DNTDVSELLKQVARGEIH-YTLADSVELSLTQRIH--PDLAVAFELTEDQPIAWFLQKTE 238

Query: 235 TEWYNI 240
            +    
Sbjct: 239 DDSLQA 244


>gi|261212328|ref|ZP_05926613.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
 gi|260838259|gb|EEX64915.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
          Length = 459

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 92/259 (35%), Gaps = 21/259 (8%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     + FF+ +LC +++     +          +R  L    +     ++ +   G  
Sbjct: 1   MKHRFSRQFFLIVLCGLMVTSVGMAA---------ERQTLIITNSKAWKPYSYLDDQGRP 51

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G  +D+  A   A   +   I++  ++  E   A++S Q DI +              L
Sbjct: 52  SGILIDYWIAYGQA---NKVNIEFKLMDWGESLQAVKSGQADIHAGLV---RSPVRLQYL 105

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F            +H+     ++S+L    + V  G        ++ +    +   + +
Sbjct: 106 DFGMPLLELDTELFVHQSLLGENLSELLAGQLDVSVGVVKGGFEEEFARRRFPELTLVEY 165

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
              + +  A +    DA+  D S +    +  ++ ++       +    L PA+ +G+ +
Sbjct: 166 LDNDLMMQAVQRGELDAFIAD-SQVANFYIVIEKGAKEFTPAQFLYSELLRPAVQKGNEK 224

Query: 237 WYNIVSWTHYAMVTAEELG 255
               ++   ++ +T EE  
Sbjct: 225 LLKEINQ-GFSKLTTEEKN 242


>gi|71278885|ref|YP_268839.1| extracellular solute-binding protein [Colwellia psychrerythraea
           34H]
 gi|71144625|gb|AAZ25098.1| bacterial extracellular solute-binding proteins, family 3/GGDEF
           domain protein [Colwellia psychrerythraea 34H]
          Length = 955

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 78/224 (34%), Gaps = 10/224 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +  GI   L     +   G + G + D    +S +     + + +   + ++ + AL 
Sbjct: 519 GKINLGIIKNLSPIEFIDEQGKFSGINRDITHLISDSTGIKFNYLPFD--SWQQLYKALL 576

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQA 152
             +ID+L  +   T+ RE    L F    +      +  +  G  S +    G  + +  
Sbjct: 577 DNKIDML-GSITPTVEREKL--LIFTDSYWQMPWVMVHPQYYGRKSKLEDFYGKQVAIVK 633

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G      L    +  +      + +  E+   A +  R D +   +++   L    +  +
Sbjct: 634 G----YYLIAKLRKIHPLITFKLVDNREQALVALQQERVDGFITTMASATQLLKQENIVT 689

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
             + + + +S       I +       I++    ++   E+  I
Sbjct: 690 LMISMMEDVSLEKSHFGINKQLPLLKGIINKGLLSITEKEKQAI 733



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 84/253 (33%), Gaps = 23/253 (9%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++ L ++ F+           +K+   L   IN     +  +   G+  G   D  R 
Sbjct: 11  IILITLFVVIFSQTVFAEKADITVKQP--LTIAINETSFPYHSIDEQGNAIGLMADMWRL 68

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
            +        ++Q++ L   E    +    ID +         R  +L  +    + +  
Sbjct: 69  WAKK---QQIEVQFIVLPWLETLSEVAKGNID-IHGGLSIVDSRRETLQFSQPLFSIYTH 124

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
             ++  +   +++++ L   SI V  G+     L  Y       +    ++   ++    
Sbjct: 125 L-YVNQQLSNVNNLADLKPYSIGVVKGSAHIENLQKYHPE----FALKTYDNRHDLYRGA 179

Query: 187 RAHRCDAYTG------DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
             +    +TG      +      L+        H +L           A+ +G+    N+
Sbjct: 180 LNNEILVFTGLEKLSDNFPDYDTLRQRFP---PHKVLRYQQGD--YGVAVAKGNNSLLNL 234

Query: 241 VSWTHYAMVTAEE 253
           +    +A V+ EE
Sbjct: 235 IEQ-GFAQVSREE 246



 Score = 46.6 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 80/233 (34%), Gaps = 16/233 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K++  L    ++    +  V  +G+ +G  ++  R  S  +  +   ++++P +  E   
Sbjct: 259 KQKDSLLVAFSSHYPPYMGVSPSGEPQGLLIEVWRLWSKKVGIN---VEFVPRDMTEGLD 315

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-----KKKGISSVSQLSG 145
            +  ++ DIL        ++  +      PI     + F+ +     K K   S+ Q + 
Sbjct: 316 LITEQKADILLA--YPDHVKTSNDIAFANPIYSSTVEVFLNNRIKDVKGKPFESLEQFNQ 373

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
                  G   + T  D   A   + +   F  +  +  A          G +  + A  
Sbjct: 374 QFNGGVIGIWQDSTFKDQLLAQYPQLNVRYFSSLITMLDAAERDEISGIVGLVDLISARL 433

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           + ++  +    L   +    L+P I   + +   IV+          EL I  
Sbjct: 434 VQSNLQTLFYRLDSPVITLKLSPVIHHKNNKLVEIVNRGFN------ELDINS 480


>gi|15639301|ref|NP_218750.1| amino acid ABC transporter, periplasmic binding protein [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025543|ref|YP_001933315.1| amino acid ABC transporter, periplasmic binding protein [Treponema
           pallidum subsp. pallidum SS14]
 gi|3322586|gb|AAC65298.1| amino acid ABC transporter, periplasmic binding protein [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189018118|gb|ACD70736.1| amino acid ABC transporter, periplasmic binding protein [Treponema
           pallidum subsp. pallidum SS14]
          Length = 272

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 31/244 (12%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVG---------FAEVKAN-----------GDWKGFDV 61
              +   + + RG L  G+  GL           F+   +             + +G+DV
Sbjct: 14  AQDASFDEARVRGTLVVGVGRGLAPLVDAATFSAFSLPSSVVPPPARCSLLLQEARGYDV 73

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +    ++  +  D   +Q   ++  E+  AL +  ID ++    +T        L     
Sbjct: 74  ELLAQVARRLHMD---VQVKVVHWDEKERALHAGVIDCIADGFTYTADHARRFAL--TQP 128

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              D + F + ++   ++V+ L G  + V A T  E   A +     +      +    +
Sbjct: 129 YVRDVRVFAVLRQAPYATVADLHGKRLGVHAVTDVEENDAYHA----LFGQVKTYAHYVQ 184

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
              A      D    ++  L A+     R   + IL + I       A         ++V
Sbjct: 185 ALTALSRAEVDVVALNLVTLCAVTPHLRR--LYRILDEPIDTCEYVFAFRADARALRDMV 242

Query: 242 SWTH 245
             T 
Sbjct: 243 VRTL 246


>gi|317048145|ref|YP_004115793.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316949762|gb|ADU69237.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 271

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 78/252 (30%), Gaps = 24/252 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++ L   + F  + +     L      G L  G +     +  +K +    GFD
Sbjct: 1   MKTMLRMACLAAPVFFSVAQAA---TL----VPGSLTIGSDLTYPPYNFLKQD-KPAGFD 52

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +F   ++S++   P              L L+S + D+++     T  R  +  + F P
Sbjct: 53  AEFIDLIASSMKLKPVV---KDTRFASLILGLKSNKFDVVASTLYVTPER--AQQVDFLP 107

Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLA----DYFKAHNMK-YHPI 174
                G   +         +   L G  +    G      L     DY +   +      
Sbjct: 108 YMKTGGSLLVTASASFAPQTPEDLCGKRVASIKGGAWIARLNKVSVDYCQPKGLGAISVR 167

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQ 232
            F    E   A  +   D    D       K T ++  + + +       P  +  A+ +
Sbjct: 168 EFPTSPEATQALLSAAVDVQYEDA---AVAKATVEKTGQRLKISSHQMIYPVVVGLAVNK 224

Query: 233 GDTEWYNIVSWT 244
            + +  + +  +
Sbjct: 225 DNPQLLSELKAS 236


>gi|120586814|ref|YP_961159.1| extracellular solute-binding protein [Desulfovibrio vulgaris subsp.
           vulgaris DP4]
 gi|120564228|gb|ABM29971.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 262

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 72/197 (36%), Gaps = 20/197 (10%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    + +CL++    S S           R  +K G +     +     +G   G ++D
Sbjct: 15  KVVMRTFVCLLLAIVFSSSAA-------VARPVIKYGYDEDYPPWE-KNVSGKPVGINID 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              AL+  +  +   + Y P   K   + L+S +ID+ +     +  RE        P  
Sbjct: 67  IMNALADRLGFE---VVYRPYPFKRVLVLLESGEIDM-TGGLARSAEREAYARYL-EPSY 121

Query: 123 YFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
               + FI+ ++ GI   + + L    I V+AG      L + F +       +    V+
Sbjct: 122 QKTIRVFIIRRESGIRLRTYADLIPLRIGVRAG----NRLYEPFDSDPRLMK-VEAHSVD 176

Query: 181 EIDAAYRAHRCDAYTGD 197
           ++     A R D   G 
Sbjct: 177 QLFQMLLAGRTDVIVGG 193


>gi|115358614|ref|YP_775752.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115283902|gb|ABI89418.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 313

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      ++ +P+   +  L L
Sbjct: 64  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALG---RTLRLVPIAWADWPLGL 120

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASIC 149
            S + D +  N   T  R+      F         GF +        I+    ++G  I 
Sbjct: 121 TSGKYDAVISNVGVTEQRKE--KYDFT-TYRLGLHGFYVRNASPIARIAQPKDIAGLRII 177

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +  +       + F+       A  + R DA     ++L    
Sbjct: 178 TGAGTSQERILLEWSRRNVAQGSKATELLYFDDDAAARVALLSGRADAELNPNASLAYEA 237

Query: 206 LTNDR 210
             + +
Sbjct: 238 ARDGK 242


>gi|215425630|ref|ZP_03423549.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T92]
 gi|289748896|ref|ZP_06508274.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T92]
 gi|289689483|gb|EFD56912.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T92]
          Length = 173

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 9/149 (6%)

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           + I  R    T  R     + F  +     Q  +  +   I+ VS LSG  +CV  GTT+
Sbjct: 1   MKIGVRGFSITCERRKV--VNFSTVYLDANQRILAPRDSPITKVSDLSGKRVCVARGTTS 58

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
              + +           +      +   A +    DA + D + L  L    + P  H++
Sbjct: 59  LRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVSTDDTILAGL--VEEDPYLHIV 112

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            PD ++  P    I   +T     V+ T 
Sbjct: 113 GPD-MADQPYGVGINLDNTGLVRFVNGTL 140


>gi|307151595|ref|YP_003886979.1| PAS/PAC sensors-containing diguanylate cyclase/phosphodiesterase
           [Cyanothece sp. PCC 7822]
 gi|306981823|gb|ADN13704.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Cyanothece sp. PCC 7822]
          Length = 1409

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 78/246 (31%), Gaps = 15/246 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           FF  +L   +      + +   +  +     +   I         V   G   GF +D  
Sbjct: 12  FFSLLLASQLFCLKGVAQDTDQVSLL----EVTAVIPKYFPPLYLVDRTGKPSGFAIDVM 67

Query: 65  RALSSAIFDDPSKIQY-LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           + ++        K++Y +     E    L +   D L  N   T  R+  +     P+  
Sbjct: 68  KEVAK---LAQLKVRYEIKNTWSEVQETLINGNAD-LIPNLGITPARQTQMSFT-APVET 122

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                F+      I +V+ L+G  + V  GT            +       VF+ +E   
Sbjct: 123 DSVSVFVRASNHQIKTVAHLAGHRVGVVKGTVGYE-----IAKNRQNIQLEVFDGIEYGV 177

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               A   DA     S L  +    D  +   IL + +++   A A+ + +      +  
Sbjct: 178 FELLAGHVDALIYSESVLKEIVAQADVSNRIKILGEPLAEIKRAIALRKDNLLLLTRLDK 237

Query: 244 THYAMV 249
              + V
Sbjct: 238 AVNSFV 243


>gi|221196379|ref|ZP_03569426.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
 gi|221203051|ref|ZP_03576070.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221176985|gb|EEE09413.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2]
 gi|221182933|gb|EEE15333.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD2M]
          Length = 312

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +  +P+   +  L L
Sbjct: 63  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALG---RTLVLVPVAWADWPLGL 119

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I +      ++G  I 
Sbjct: 120 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTDSPIRAIAEPKDVAGLRII 176

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +          + F+       A  + R DA     ++L    
Sbjct: 177 TGAGTSQEHILLEWSRRNVAHGLKATELLYFDDDAAARVALLSGRADAELNPNASLAYEA 236

Query: 206 LTNDR 210
               +
Sbjct: 237 ARTGK 241


>gi|117919592|ref|YP_868784.1| extracellular solute-binding protein [Shewanella sp. ANA-3]
 gi|117611924|gb|ABK47378.1| extracellular solute-binding protein, family 3 [Shewanella sp.
           ANA-3]
          Length = 291

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 18/223 (8%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           LK G N     +A     G+ +G DV+  RA +  +  +   + ++ + AK     L+S 
Sbjct: 37  LKVGYN-DWPPYAWEDPQGEAQGLDVELLRAFAEHLGCE---VTFINVPAKRSHQMLKSG 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASICVQ 151
            +D++      T  RE      F      +            K  ++    +    + + 
Sbjct: 93  SLDMMMGA-TKTAEREEY--ALFSAAYRDETVRLFVLDENKDKIRLTQWQDIFSQKLRLL 149

Query: 152 AGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
              +    + DY +           I+    ++        R D   GD  A+     + 
Sbjct: 150 VPISGWYGV-DYERTRQRLEQEHLLILSPDADKSVQMLTYGRADLIIGDAMAMP-YIASQ 207

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
            +      L  ++ ++ +   + +       +      A + A
Sbjct: 208 HQGVRLSPLKPVLDRNQIHLMLSKQTLSSAQL--KQFNAAIKA 248


>gi|226363677|ref|YP_002781459.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226242166|dbj|BAH52514.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 298

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 15/260 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             V+   +     T  ++  S+L  ++  G +  G   G   ++  + +G   G  V   
Sbjct: 21  LVVAAGSVAGCTKTDTASGGSLLQQLQDSGTVTVG-FAGEAPYSFEQ-DGQLTGATVALH 78

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R +   +  D   ++ +  +       LQ+++ D++S        R      AF    + 
Sbjct: 79  REIFKNLGID--NVEGVSTDFGALIPGLQARRFDVVSAGMSILPQR--CEQAAFSEPEFN 134

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                ++ K    +     S     V+    T    +DY +   +    +     ++   
Sbjct: 135 YTTALMVPKGNPANLTDMQSVQQSGVRMAAMTGAIESDYAQQLGIDA--MQVASPQDGMD 192

Query: 185 AYRAHRCDAYT-GDISALYALKLTNDRPSE-HVILPDIISKSPL----APAIIQGDTEWY 238
           A    R D +    IS  +  +     P E       +I   P          + DTE  
Sbjct: 193 AVANGRADVFALTGISLNWLAQNNPQAPVEVTNSFVAVIDGVPQVGAGGTVFRKEDTELR 252

Query: 239 NIVSWTHYAMVTAEELGITQ 258
           +  +    A +T+++     
Sbjct: 253 DAYNAEL-AKITSDKEKYLS 271


>gi|291618871|ref|YP_003521613.1| FliY [Pantoea ananatis LMG 20103]
 gi|291153901|gb|ADD78485.1| FliY [Pantoea ananatis LMG 20103]
          Length = 299

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 68/231 (29%), Gaps = 19/231 (8%)

Query: 34  GFLKCGINTG-LVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L    +       A + A+     G D D  R L+ ++     K++ +P + ++  L 
Sbjct: 54  GTLTVATSATHSPPLALLAADNVTRIGSDPDIARLLADSLG---LKLKLVPASWEDWPLG 110

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASI 148
           + + + D+   N   T  R+      F      D   F +        I+S   ++G  I
Sbjct: 111 ISAGRYDVAMFNIAVTEERKK--KFDFA-TYRADNHAFAVKADSPVSAINSPPDVAGKRI 167

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  +   +  K      PI             + R DA  G  +     
Sbjct: 168 IVASGTNQERILLSWDAQNRAKGLPPVTPIYLTDDASATLYLLSGRADAMFGPHAVAAWK 227

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +  +      L              +        +       +   +  
Sbjct: 228 VASRGQ----TKLVGEGPYRAWVAVTTKKGNGLAAALQTALDGAIAGGQYR 274


>gi|218672536|ref|ZP_03522205.1| extracellular solute-binding protein family 3 [Rhizobium etli GR56]
          Length = 213

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 11/198 (5%)

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFD D     +  +      +++ PL    R  AL + ++DIL      T  R     + 
Sbjct: 1   GFDADIATLFAKELGVK---VEFQPLAVANRIPALTTGKVDILFATMAMTEERAK--SIQ 55

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           +      +       K     + + ++G  I V   ++ +  + D   A         F+
Sbjct: 56  YSKPYAANTISLYAAKADAAKAPADVAGWEIGVPKSSSQDKAVTD---AVGSTATIRRFD 112

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
                  A  + +  A  G+    Y  +L       +    D   K+        G+ +W
Sbjct: 113 DDAATLQALISGQVKAVGGN--QFYGQRLDAASAGTYERKID-FLKTYNGVGTRLGEKDW 169

Query: 238 YNIVSWTHYAMVTAEELG 255
               +     +  + EL 
Sbjct: 170 NEAANSFIDKIKASGELA 187


>gi|170741747|ref|YP_001770402.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168196021|gb|ACA17968.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 255

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 75/224 (33%), Gaps = 13/224 (5%)

Query: 36  LKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           LK G     + F  +       +G  VD   A+          +Q  PL       AL +
Sbjct: 26  LKVGSTPTGIPFTFLDTKTNSIQGVMVDVITAVGREAG---FTVQVEPLQFSTLIAALNA 82

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQA 152
           K+IDI+S     T  R+    + F    Y  G+G I+ K      +  + L G ++  Q 
Sbjct: 83  KKIDIISAAMFITPPRKEV--IDFSAPVYTYGEGMIVAKGDTKDYTGFADLKGETVGAQV 140

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211
           GT     L    K   +     +++ + +I     + R  A +       Y LKL     
Sbjct: 141 GTAFVEPL----KKSGLFSEVKIYDTIPDILRDVNSGRLKAGFADGPILAYNLKLGLFPN 196

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              V          +   + + D +    +      +  + EL 
Sbjct: 197 VRLVDSYKPTVVGSVGIGLRKEDRDLREKIDAALARIKESGELA 240


>gi|119898519|ref|YP_933732.1| amino acid-binding protein [Azoarcus sp. BH72]
 gi|119670932|emb|CAL94845.1| conserved hypothetical amino acid-binding protein [Azoarcus sp.
           BH72]
          Length = 287

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 88/268 (32%), Gaps = 20/268 (7%)

Query: 1   MYKDFFVS-ILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M     +S +  L ++   +             S L  ++  G +  G       F  ++
Sbjct: 1   MKDTLKLSHLFSLALVIVAAVIAQWIETPERSRSALERVRDGGVVLAGYALE-PPFVTLE 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           A+G   G   +  R   +A+   P +I ++  +       L S QID++      T  RE
Sbjct: 60  ADGRVSGEAPEVFRRAVAAVG--PGQIDWVHSDFGSLAHELASGQIDVIVSGMFITPERE 117

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +                    +G+ S ++++  S          + +A          
Sbjct: 118 GQMVFTRPTAVVCPAFAVPAGNPQGVHSYTEVADRSELRLGVVAGAVEVAQARGLGVPAE 177

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPL 226
             + F       AA  + R  A+    SA+   +   + P   ++      P ++   P 
Sbjct: 178 RTVAFPDALSGLAAVESGRVSAFAL--SAVSLRRAIVEHPLLQMVAPLVGDPPVLPGRP- 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           A A+  GD ++ + +       + + E 
Sbjct: 235 AFALRPGDRDFRDALDHVLDGFLGSPEH 262


>gi|313681272|ref|YP_004059010.1| histidine kinase [Sulfuricurvum kujiense DSM 16994]
 gi|313154132|gb|ADR32810.1| histidine kinase [Sulfuricurvum kujiense DSM 16994]
          Length = 863

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 73/241 (30%), Gaps = 12/241 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G++        V   G + G    +   L   +      + Y      +   A+ +
Sbjct: 328 VIRVGVDHNWPPIESVDEKGRYTGISASYLHFLEKRLGV-RFDVDYSRPLWSDSIRAVNN 386

Query: 95  KQIDIL-SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQA 152
           K++D+L             +  L F           + +     ++ ++ L+G  + V  
Sbjct: 387 KELDMLSCAAIADN----RNDKLRFSRPYLKQTVVIVTNSNVGYVNDLNDLNGKKVAVVR 442

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
              +E  L  Y+        P++ +   E      +    A    +S   +  +      
Sbjct: 443 SYASEEYLRTYYPK----IIPVLADSSLEALKKVASGEAYACIEGLSV-VSYLIERHNLK 497

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
              ++ +   +  LA A  +      +I      ++  AE   I    +     +  N  
Sbjct: 498 NIKVVGETPFRYELAFAFRKDWGIMASISDKVLASVTPAEYEEIHGHWLEMKHDEPVNYR 557

Query: 273 V 273
           +
Sbjct: 558 L 558


>gi|189423809|ref|YP_001950986.1| amino acid ABC transporter periplasmic protein [Geobacter lovleyi
           SZ]
 gi|189420068|gb|ACD94466.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component/domain-like protein [Geobacter
           lovleyi SZ]
          Length = 261

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +G LK G +     F+ + A+    G D++  R ++  +      ++ + ++      A
Sbjct: 165 SKGVLKFGTSAVTEPFSFMDASHTVVGLDIEIARYVARKL---DMTLEVVNMDFGAMIPA 221

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           L + ++D++      T  R     + F    Y  G   ++ 
Sbjct: 222 LTAGKVDMIGACITITDERAK--KVLFSEPYYVGGIAALVR 260



 Score = 39.3 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 7/115 (6%)

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
             K++ ++ + QLSG    V  GT  +  +   F     +Y    F  V +   A +A +
Sbjct: 24  CSKREKVTHLQQLSGKQFAVPTGTVADKLVLSKFPDAKFQY----FNSVLDAALAVQAGK 79

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
            DA   D      L+    +     +LP++I+K     A+     +    +    
Sbjct: 80  TDAAAYDEPI---LRNIAAKNKGLTVLPELITKDNYGFAVQTNRQDLKQAIDLVV 131


>gi|124268922|ref|YP_001022926.1| sensor histidine kinase/response regulator [Methylibium
           petroleiphilum PM1]
 gi|124261697|gb|ABM96691.1| sensor histidine kinase/response regulator [Methylibium
           petroleiphilum PM1]
          Length = 917

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 61/202 (30%), Gaps = 18/202 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +        ++ L   + S  +           L+ G+      F       +  G D++
Sbjct: 7   RALRWLAGSVLGLCALACSAASPSP--------LRYGMLADFPPFQIWPEGSEAGGADLE 58

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             R L+ A+      ++Y   +       L++ ++D L+ +      RE    LAF    
Sbjct: 59  MLRRLAPALGVQVEPVRY--TDFVALERDLRAGRLD-LASSMARNAERE--PTLAFSVPY 113

Query: 123 YFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
               Q  +        S  + L+G  +   AG   E    + F         +    + +
Sbjct: 114 ALIEQAVVTRASDPSGSLAADLNGRRLATVAGYAAEANARELFPLAQR----VPVASIAD 169

Query: 182 IDAAYRAHRCDAYTGDISALYA 203
              A +  R D        L  
Sbjct: 170 GLRAVQQGRADVMIEAQPVLVG 191



 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 64/223 (28%), Gaps = 9/223 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L   +  G + FA + A+G  +G  VD  RA+   +        +    A E   ALQ  
Sbjct: 277 LNVAVVDGRLPFAVLDADGRPQGLSVDVLRAVLGRLGL--VSGTWRASGATEALAALQRG 334

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++D+    +      +      F           +         + QL G  + +     
Sbjct: 335 EVDLALGLSAVATPADTVR---FIGPYIEHPMVLLGRPGGSAWGLEQLVGRRLALPPAHF 391

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +A    A       +  + +        +   DA   D+     L   + R    +
Sbjct: 392 ARPLIA----ARYPGIELVACDPLPNCVERVASGGADAALADVITAAVLLAESPRSDVQI 447

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
                  +     A+         ++     A V  + L + +
Sbjct: 448 TGTAAGLRQEHGIAVSSRHAALLPLLQRALDATVADDLLELKR 490


>gi|325680588|ref|ZP_08160131.1| arginine ABC transporter, periplasmic arginine-binding protein ArtP
           family protein [Ruminococcus albus 8]
 gi|324107725|gb|EGC01998.1| arginine ABC transporter, periplasmic arginine-binding protein ArtP
           family protein [Ruminococcus albus 8]
          Length = 161

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 9/139 (6%)

Query: 13  IILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
             L     S NA    L  IK+ G L          F  +  +    G++ D    +   
Sbjct: 25  GCLTACGSSKNAGPLTLDQIKENGKLTVATEAAYEPFEYMDGD-KIIGYNADLFAKICDD 83

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +   + Y+ L  +     L++K+ D++      T  R                  F+
Sbjct: 84  LGVE---LDYIDLPFQGILAGLEAKKYDVVGATLGVTAERAG--KYTMTYPIQNGTTVFV 138

Query: 131 MHK-KKGISSVSQLSGASI 148
             K    I S+  +SG  +
Sbjct: 139 KRKGDDSIKSIEDMSGKRM 157


>gi|117620646|ref|YP_855451.1| virulence sensor protein BvgS, putative [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117562053|gb|ABK39001.1| virulence sensor protein BvgS, putative [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 1425

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 15/222 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL-Q 93
            L+ G+       +E+  NG  KGF  D  + +S        +   +P ++     AL Q
Sbjct: 290 TLRFGVAPDWPAVSEIDGNGQLKGFIADMLKLVS---LRSGLQFTLVPTSSWAETQALFQ 346

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152
           ++++D +      T   E      F P   F  +     +    + ++++L G  + +  
Sbjct: 347 ARKLDFIPA---ITPTAERRQYSLFTPDYAFIHRVIAARQGSEELDNLNELKGRRVGIVG 403

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G+  EL L +      +  HP+      ++      H+ D     ++ L           
Sbjct: 404 GSVEELVLNE------VGAHPLTVSSDTKLLPLLDGHQVDYVLMSMTTLEQALQKGFNNR 457

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
             V+      + P+A A+ Q D     I++      +  EE+
Sbjct: 458 YQVVFSGNELRVPVAMAVHQQDPMLQQILTKVLL-SIRPEEM 498



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 85/247 (34%), Gaps = 23/247 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIK----------KRGFLKCGI-NTGLVGFAE 49
           M +  + +IL      ++  +   + L   +           R  L  G+ +     +  
Sbjct: 1   MLRLCYRAILLCWFTCWSHVAAAETSLDKDQLGLAERLWLASRSDLVVGMPSVAWPPYIY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE-RFLALQSKQIDILSRNTDWTL 108
             + G + G   DF   ++  +      ++Y           AL   ++D+L      T 
Sbjct: 61  ANSRGGFSGPLDDFATLIAGRLG---LTVRYKTYPYYAGAQQALLDGEVDMLIG---VTP 114

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            +     + F        +G ++ +++G  +++         + G ++   LA+      
Sbjct: 115 SQSRQQKMRFTSDLMTLPRGVLLAREEGEPTLATARQLRWVCEHGFSSCEELAEL----- 169

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                   +  +E     +    DAY  D+ +L  L+    +    VI P+ ++ + LA 
Sbjct: 170 GMTQLTEADSSDEAVFMVKKGLADAYLSDLPSLVRLQRLQQQAGLKVITPEWVTDTSLAM 229

Query: 229 AIIQGDT 235
           A+   + 
Sbjct: 230 AVGPDNQ 236


>gi|302341689|ref|YP_003806218.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
 gi|301638302|gb|ADK83624.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
          Length = 374

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 14/223 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            I  +  +    +     F  V   G  KGF++D    L  A+      +   P    E 
Sbjct: 20  AIAGKREVIYAFDNAFPPFTYV-EGGQPKGFEIDV---LQQALEGSGFNLIMRPGPWDEI 75

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRP-ITYFDGQGFIMHKKKGISSVSQLSGAS 147
              L++  +  LS     T  RE    L F    T              I +++ L G +
Sbjct: 76  QRQLKAGNVQ-LSSGAAKTPQREK--DLLFPDRPTCELDVRIFTAASSKIRTIADLDGRT 132

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +  Q G+  +  LA   KA+      ++F+   +   A    R DA      A +     
Sbjct: 133 VATQRGSLYQQLLAKKTKAN-----LLLFDNEPQALQALNDGRADACVIAGRAGHFFI-K 186

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           N        +   I    +   I +   +    +S    A+  
Sbjct: 187 NQGYKNISAVGTPIQVINIYYLIARDRPDLARAISQGLAAIQQ 229


>gi|218670787|ref|ZP_03520458.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli GR56]
          Length = 236

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 56/208 (26%), Gaps = 13/208 (6%)

Query: 34  GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
             +             V    G   G++ D    ++  +     K++Y   +      A+
Sbjct: 32  KSVVVVTENAYPPLQFVDPKSGKAIGWEYDAMNEIAKRL---NFKVEYQNTSWDAMIQAV 88

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASI 148
              Q +     T  T+  +    + F        Q  +      +     S +  +   I
Sbjct: 89  SDGQYN--IGMTGITIKDDRKQKVDFSDPYMRSQQFMLVRGDEKRFTDAKSFAAFNDGLI 146

Query: 149 CVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
             Q GT+     + +    +       +FE       A +    D    D  A      +
Sbjct: 147 GAQPGTSPFYTAVYEILDGNEQNPRIKLFETFGATVQALKTGDVDLVLTDSVAAKGYVDS 206

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++      ++ + +          +G  
Sbjct: 207 SNGG--LKVVGEALGTEDFGFIFPKGSD 232


>gi|172063351|ref|YP_001811002.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171995868|gb|ACB66786.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 313

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      ++ +P+   +  L L
Sbjct: 64  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALG---RTLRLVPIAWADWPLGL 120

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+       ++G  I 
Sbjct: 121 TSGKYDAVISNVGVTEQRKE--KYDFT-TYRLGLHGFYVRNASPIARIAEPKDIAGLRII 177

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +  +       + F+       A  + R DA     ++L    
Sbjct: 178 TGAGTSQERILLEWSRRNVAQGAKATELLYFDDDAAARVALLSGRADAELNPNASLAYEA 237

Query: 206 LTNDR 210
             + +
Sbjct: 238 ARDGK 242


>gi|52841357|ref|YP_095156.1| Peb1 (arginine binding periplasmic protein) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628468|gb|AAU27209.1| Peb1 (arginine binding periplasmic protein) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 253

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 74/250 (29%), Gaps = 29/250 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGF 59
           M +  F+ +    +L                    LK G+      F+ +      + GF
Sbjct: 1   MKRIVFILLFISNVLV---------------HSESLKVGVLQFAPPFSSISDKANHYYGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V     + + +     K +Y+P+  +     L      I+  +T  T    +     + 
Sbjct: 46  VVALMNIICNRL---QEKCEYIPIPKEGELKGLDKGVYHIVFSSTPITTS--LPANYRYS 100

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F+  K   I +++ ++   +        +  L    K +      I +   
Sbjct: 101 LPYLPSDGQFLTLKNNSIDTLNDINFKKVGFFKINFQQSPL---LKKYETTNTLIEYTDP 157

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235
            E+  A    + DA   +  A   +      P+E   L  I  K P         ++  +
Sbjct: 158 AELVNALTTKKIDAILINYQASRFIVNNL-NPTEDDQLKLIGDKIPIGSGYGIIALKNQS 216

Query: 236 EWYNIVSWTH 245
              + ++   
Sbjct: 217 ALIDKINHIL 226


>gi|328675357|gb|AEB28032.1| polar amino acid uptake transporter [Francisella cf. novicida 3523]
          Length = 232

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/180 (11%), Positives = 48/180 (26%), Gaps = 10/180 (5%)

Query: 36  LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           +  G       F+     +  + G D+    A + +      +I+++  +       L++
Sbjct: 9   ITVGTTGDYAPFSIYNPKDNKYSGKDIKLIEAFAKS---KKEQIKFVKTSWATAENDLKN 65

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D+       T  R+     +   I++         K     + S +      V    
Sbjct: 66  NKFDVFVGGMTITPERKKEFIFSNPLISFNKAAMTACKKLNKYKTFSDIDNPKTLVIENR 125

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH----RCDAYTGDISALYALKLTNDR 210
                +    K  N K   I      +   +          D    D   +      N +
Sbjct: 126 GGTNQVFALQKLKNAKVLIIS--DNNQAINSIIKGIDNIHPDIMFTDTLEIAYQHSKNHK 183


>gi|271501608|ref|YP_003334634.1| Lytic transglycosylase catalytic [Dickeya dadantii Ech586]
 gi|270345163|gb|ACZ77928.1| Lytic transglycosylase catalytic [Dickeya dadantii Ech586]
          Length = 485

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 73/251 (29%), Gaps = 20/251 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +      F+ ++ L++           S     L  I  RG L+    T         
Sbjct: 1   MKRLTINYVFIGVIALLLTLALWPNIPWRSHQDVQLRQILSRGELRISTVTS--PLTYTL 58

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           +NG   G D +  +  +  +      +  +  N  + F  L +   D+L+    +   R 
Sbjct: 59  SNGSPTGLDYELAKRFADYLGVR--LVVSVRQNVDDLFSDLDNDNADLLAAGLIYNQER- 115

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK- 170
                   P  Y   Q  +        +        + V +G+    TL D       + 
Sbjct: 116 -LNRFQAGPSYYSVSQQLVYRMGSARPTSLDKMQGKLTVLSGSAHAATLRDLKAEKYPQL 174

Query: 171 -YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            +         ++       + D YT   S    L        +  +  D+  + P+   
Sbjct: 175 SWEVATDVSELDLLKQVADGKLD-YTIADSINIGLMQRIH--PQLAVSFDLSDEEPVTWY 231

Query: 230 IIQGDTEWYNI 240
           + Q   +  + 
Sbjct: 232 MRQNRDDSLSA 242


>gi|73541411|ref|YP_295931.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72118824|gb|AAZ61087.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 347

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 65/234 (27%), Gaps = 22/234 (9%)

Query: 24  ASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A     I +RG L   +       F   + +G   G D+D  R L+  + +   +     
Sbjct: 106 APEFARIYERGELVVAVLKVDQPPF-FQERDGQLLGLDIDLARELAQKL-NVRLRFNRDA 163

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF--------IMHKK 134
                    L   + D+       TL R  +  ++F        +           M + 
Sbjct: 164 TTFDGVVSLLAQGKADMAVSKLSRTLPR--TQIISFSTPYLRLNRALLLNRVKFAQMARG 221

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
           + +  V +   +SI V   ++    +   F           +   +    A  A +  A 
Sbjct: 222 RPVPDVIRAYDSSIGVVGNSSYSEYVTSNFPKA----FVTRYPTWDSALKALDAGQVTAV 277

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTH 245
                     ++    P+  + L  +        L  A+          V+   
Sbjct: 278 Y--RDEFEVKRVLKADPTAALRLRVVTLHDLEDTLGIAVNVSAPALLAFVNQFL 329


>gi|311279322|ref|YP_003941553.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308748517|gb|ADO48269.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 285

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 68/247 (27%), Gaps = 35/247 (14%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   +      G   +      G   GF+ +    L   +     + + +  N      
Sbjct: 29  KEWKSITIATEGGYEPWNLTLPGGKLSGFEPELMENLCQRM---AIECKLVVQNWDGMIA 85

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---------GISSVS 141
            L + + D++      T  R+    + F          FI  K            I  + 
Sbjct: 86  GLNAGKYDVIMDAIVITPDRKKV--VTFTVPYASTPASFIAVKGTLLPPATGAGHIIKLH 143

Query: 142 Q---------------LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                           L G +I + +GT     +  YFK          +    +     
Sbjct: 144 DDEKEIQAAIAPLKAALKGKTIGIASGTVYTPFIDKYFK---DVAEVREYNSSADAILDL 200

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A R DA   DI+   +     +  + +     L   I     A  +   DT+    +  
Sbjct: 201 QAERIDAVFDDITFANSTLSRPENSNLNFSGPQLSGPIWGDGEAMGVRHSDTDLKAKLDA 260

Query: 244 THYAMVT 250
              A + 
Sbjct: 261 AIQAALA 267


>gi|261251352|ref|ZP_05943926.1| GGDEF domain protein [Vibrio orientalis CIP 102891]
 gi|260938225|gb|EEX94213.1| GGDEF domain protein [Vibrio orientalis CIP 102891]
          Length = 452

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F    +   IL   +            +   L    +     F+ + ++G+  G  
Sbjct: 1   MKRIF----VSFFILMCATVYAQEP------ESKQLIVANSKAWKPFSFINSDGEPDGIL 50

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+          +  +I++L L+ +    A+   + D+      W+  RE    L F P
Sbjct: 51  IDYWNYYGEK---NDVEIEFLLLDWQSSLDAVTEGRADVH-AGLLWSENRESF--LDFAP 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +         ++++     + +L+        G  +     ++ + H        F   +
Sbjct: 105 VIMSIDTQLYINQELIGIDLDELTFGKHDYVVGVVSGGYEEEFTRLHFPHLKLKNFANNQ 164

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           ++  A  +   D +  D+        +   P   + +
Sbjct: 165 QMIDAAFSGDLDGFVADLQVANFYLYSRKEPKRFIGV 201


>gi|114769152|ref|ZP_01446778.1| probable amino acid ABC transporter, substrate-binding protein
           [alpha proteobacterium HTCC2255]
 gi|114550069|gb|EAU52950.1| probable amino acid ABC transporter, substrate-binding protein
           [alpha proteobacterium HTCC2255]
          Length = 281

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 74/235 (31%), Gaps = 8/235 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           A  L D++K+G+    +      ++++KA+G   G   D  RA+ + +      I    +
Sbjct: 27  ADTLDDLRKKGYATVAV-ANEPPYSDIKADGYVTGAAPDVARAVMAKLGVPE--IDAKVI 83

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
                  ALQ++++D+ +        R  S+  +   +   +     +     I +   +
Sbjct: 84  MYGAMIPALQARRVDMATSGLYIKPKRCESIIYSEPDLCGAEAFAVAVGNPLNIMTYEDI 143

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +                A   +         VF          +  R + +         
Sbjct: 144 AANPDATMTTCAGCAEEAYALERGVQPSQIKVFTDPPSGIKMLQQGRVNVFALSGLGTQD 203

Query: 204 LKLTNDRPSEHVILPDIISKSPLAP---AIIQGDTEWYNIVSWTHYAMVTAEELG 255
           L    + P+  +++P      P+     A    DT + +        +  + E  
Sbjct: 204 LLRKTNDPNLELVMPVTGV--PMGCAGAAFNANDTAFRDAYDAALKELKDSGEFA 256


>gi|326405220|ref|YP_004285302.1| putative ABC transporter substrate-binding protein [Acidiphilium
           multivorum AIU301]
 gi|325052082|dbj|BAJ82420.1| putative ABC transporter substrate-binding protein [Acidiphilium
           multivorum AIU301]
          Length = 276

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 10/177 (5%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           RG L     T     + + A+G   GF V+F  A+++ +     K++++  +       +
Sbjct: 36  RGVLTVAYRTDDKPVSFI-ADGKPTGFLVEFEEAIAAKLG---LKVRFVATSFASMLPGV 91

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
           ++   D  +  T  T  R+    +AF     +     +      I  V   SG ++ +  
Sbjct: 92  RNHIYDTAAFATLVTPARQK--AVAFTTPIGYGQARLVSRSGAAIGKVDGASGKTVAITQ 149

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           G+     L               F  +     A  A + +     ++   AL   + 
Sbjct: 150 GSALIPLLRHIAP----GVKVREFPNIAASLNALIAGQVNGLFTGLATANALVKKHP 202


>gi|218283466|ref|ZP_03489466.1| hypothetical protein EUBIFOR_02056 [Eubacterium biforme DSM 3989]
 gi|218215848|gb|EEC89386.1| hypothetical protein EUBIFOR_02056 [Eubacterium biforme DSM 3989]
          Length = 276

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 78/285 (27%), Gaps = 29/285 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-----------V 50
           +K    S +          S  A+   D   +     G+  G   F             +
Sbjct: 3   FKKLMASAMVCTFALTGCASNTATTSED---KDTFVVGMECGYAPFNWQTSEKTDTSVKL 59

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G   G+DV               K+            AL+  +ID +      T  +
Sbjct: 60  GKAGYADGYDVQVA---KKIAKKLGKKLVIKKTAWDGLIPALEGDEIDAIIAGM--TKDK 114

Query: 111 EISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAH 167
           +   G  F    Y      ++  K    +  + +   +    V    T   ++ D  K  
Sbjct: 115 DREEGADFTTPYYDSKGMIMIVRKDSEEAGYTDIQQFTGKNIVGQKATNYDSVIDQIKGV 174

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIISK 223
           N            E+  A + H  D  T +++    +   N   +          D  + 
Sbjct: 175 NH---VTPKATYPEMVLALQQHEVDGITAEMAVAKGVVEANPDLAVVQFADGHGFDCDTT 231

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
             +A      D++++  V     ++   E   + +  +     + 
Sbjct: 232 VSIALKEGSRDSKFFKKVQKALDSISDEEREEMMEYAVEHQPTED 276


>gi|167625201|ref|YP_001675495.1| extracellular solute-binding protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167355223|gb|ABZ77836.1| extracellular solute-binding protein family 3 [Shewanella
           halifaxensis HAW-EB4]
          Length = 722

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 64/220 (29%), Gaps = 11/220 (5%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            +  I+  G L+ G     V F+     G   GFD      L+  +      I +     
Sbjct: 470 SIQAIRDAGTLRVGYIPSNVPFSYYNNAGHLVGFDTAMATKLAEDLRVKIEFIPFRK--- 526

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143
            +   +L++   DI           E    L++                      S  ++
Sbjct: 527 DQLAASLKAGFFDIAMSGLAM--DIEQMDALSYANPVLELNLAIATKDHLVNEFKSNEKI 584

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
                   A       + D  K        +     ++     + H+ DA     SA   
Sbjct: 585 QEMRNMTIAYVEHSDAIED-AKKFAPNIKFVKIAGYKDFFRQ-KTHKYDAVVI--SAQAG 640

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              T   P   + L +  S+ P+A AI Q +    N ++ 
Sbjct: 641 SAWTLFFPGYGIALLENQSRYPVAYAIAQNNQSLLNYINN 680


>gi|167034124|ref|YP_001669355.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166860612|gb|ABY99019.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 291

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 41/277 (14%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             +  +L  ++L              I   G LK  +      ++    +G  +G DV+ 
Sbjct: 2   RLWTVLLSGLLLCCAVAQAQVRNYDAIIAAGELKVAVYKDFAPYSFQD-HGQPRGVDVEL 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPI 121
            +AL++A+      I             L     D + R +     +  ++ + + +   
Sbjct: 61  AQALATALGVRLQLI------WAPPGEKLDDDLRDYIWRGSPLRHQQLADLMMRVPYDHD 114

Query: 122 T-----------------------YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158
                                         +   +   ++SV+      I V+  +    
Sbjct: 115 YAQKRNELGELENAQVVMFGPYQQERWQVAYDQRRLASVASVAVFQQHPIGVEVDSVPSF 174

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS------ 212
            L   F    +      +  V++  AA +A + DA       +         P       
Sbjct: 175 YLTSVFN-GMLSAKTHHYPNVQQAFAAMQAGQVDAVMAMRGEVDWQLHQAADPQLALAEN 233

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +  L     +  +  A+ + + +    V      M+
Sbjct: 234 AYPNLGKQAWE--IGMAVHESNRQLAYAVEEALEGMI 268


>gi|307609872|emb|CBW99396.1| hypothetical protein LPW_11731 [Legionella pneumophila 130b]
          Length = 253

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 79/250 (31%), Gaps = 29/250 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGF 59
           M +  F+      +LF ++F  ++           LK G+      F+ +      + GF
Sbjct: 1   MKRIVFI------LLFISNFLVHSES---------LKVGVLQFAPPFSSISDKANHYYGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V     + + +     K +Y+P+  +     L      I+  +T  T    +     + 
Sbjct: 46  VVALMNIICNRL---QEKCEYIPIPKEGELKGLDKGVYHIVFSSTPITTS--LPANYRYS 100

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F+  K   I +++ ++   +        +  L    K +      I +   
Sbjct: 101 LPYLPSDGQFLTLKNNSIDTLNDINFKKVGFFKINFQQSPL---LKKYETTNTLIEYTDP 157

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235
            E+  A    + DA   +  A   +      P+E   L  I  K P         ++  +
Sbjct: 158 AELVNALTTKKIDAILINYQASRFIVNNL-NPTEDDQLKLIGDKIPIGSGYGIIALKNQS 216

Query: 236 EWYNIVSWTH 245
              + ++   
Sbjct: 217 ALIDKINHIL 226


>gi|220926472|ref|YP_002501774.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219951079|gb|ACL61471.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 256

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 17/222 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++     G   F  V  +G   GF+VD   AL  A        + +          L+  
Sbjct: 28  VRIATEGGNPPFNYV-EDGKPAGFEVDLAEALCKAAG---LTCRIVLHQWDGIIRGLEGA 83

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAG 153
           + D +  +   T   +    ++F    Y     ++  +         + L G ++   A 
Sbjct: 84  EYDAIMASLAITP--KRRSRISFSRSYYRIPSSYMARRDDQTGPLDPAALKGRAVGAAAH 141

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +     L               F+ V++     R  R D   GD   L  +    D  + 
Sbjct: 142 SPQLAYLEARAPEA----DIRSFDSVKDAGYDLRLGRLDLVLGDKRELTEILALPDGAAC 197

Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250
             ++ D+    PL        + +GD            A++ 
Sbjct: 198 CRLVGDVPPGDPLLGEGVGIGLRKGDDALREAFDRAIAAVIA 239


>gi|329116225|ref|ZP_08244942.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
 gi|326906630|gb|EGE53544.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           parauberis NCFD 2020]
          Length = 271

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 56/204 (27%), Gaps = 17/204 (8%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K     + + L+++     +  A    ++          ++    F   +      G+
Sbjct: 1   MKKLITGFMGILLLLMAIGISTVKADTKEEV------IVATDSATKPFTYKEGK-KDTGY 53

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++  +A+          +    +        + + +  I + +  ++  RE      F 
Sbjct: 54  DIEVLKAVFKDSKKYKLSV--QTVAFPSILTGIDAGRYQIAANDFAFSKEREA--KYLFS 109

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177
                         K  IS +  LSG      +G      +  + K +  K    +    
Sbjct: 110 SPISKSNFAIATKGKTDISHLKDLSGKKTQGISGANYMQIMEKWNKQNPDKKPIGLTYAG 169

Query: 178 ---RVEEIDAAYRAHRCDAYTGDI 198
                 +        + D    D 
Sbjct: 170 SSTPYTQRLQMLEDGQLDFLLYDA 193


>gi|218781334|ref|YP_002432652.1| signal transduction histidine kinase, nitrogen specific, NtrB
           [Desulfatibacillum alkenivorans AK-01]
 gi|218762718|gb|ACL05184.1| signal transduction histidine kinase, nitrogen specific, NtrB
           [Desulfatibacillum alkenivorans AK-01]
          Length = 1131

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 81/267 (30%), Gaps = 23/267 (8%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
            +  F  + S +      +K RG      +     +  +  NG   GF++D  +A+   +
Sbjct: 30  ALSGFSLAVSPDG----TVKARG------DWAYPPYETL-KNGKPVGFNIDVLKAVCRIM 78

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
              P          +E    L+  +ID+++         +    + F         G  +
Sbjct: 79  GYQPE---ISLGPWREVREDLEKGRIDMITGMF---YSPDRDQYVDFSSPHVIVTHGLFV 132

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K   I S+  +  A I VQ G      + DY  +  +    +       +     +   
Sbjct: 133 KKGSPIRSMEDIKNARIAVQEG----DIMHDYVLSQKLGKQTLTARDQSGVLKLVASGNA 188

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           D                +     V +   I       A+ +G+      ++     +   
Sbjct: 189 DCALVPKMQGL-YYSRENGLHNLVTVGPPILPRQYCFAVQEGNVNLLAGLNEGLSVLKAT 247

Query: 252 EELG-ITQKNINQVSKDTTNPDVQRFL 277
            E   I +K       +  +  ++++L
Sbjct: 248 GEFEQIHRKWFGMFEPEPASSTIKKYL 274


>gi|294675380|ref|YP_003575996.1| sensor histidine kinase [Prevotella ruminicola 23]
 gi|294473594|gb|ADE82983.1| sensor histidine kinase [Prevotella ruminicola 23]
          Length = 550

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/224 (10%), Positives = 58/224 (25%), Gaps = 19/224 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        + +L  T  S +   +  +     +  G++        V  +G   G+D
Sbjct: 1   MIKLRLDRYWIVGLLITTLCSISMRAIAFVPPTDQITIGLDANYAPLQSVDKDGLPHGYD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DF R L   +        Y+P    +   ++ +   D+                + +  
Sbjct: 61  IDFTRELMKRMGIKYY---YVPNLWNKVATSVLNGDTDLAMMVYS----SYRKDTIYYSR 113

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  K    +   +           +     L +           +    ++
Sbjct: 114 PIFRLYYQVVYRKSDYKTFDFRNLKGKTFAFLNSRHISELVER-----EGGTCVKVNDLD 168

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           +        R DA           +       +H  L  +  + 
Sbjct: 169 QSFRELANGRYDAIIC-------YRYQAKYFIDHYGLESLAREE 205


>gi|127513008|ref|YP_001094205.1| diguanylate cyclase [Shewanella loihica PV-4]
 gi|126638303|gb|ABO23946.1| diguanylate cyclase [Shewanella loihica PV-4]
          Length = 934

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 10/163 (6%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G LK G             +G++ G + +    ++  +      + +          AL+
Sbjct: 500 GTLKVGYLAAWAPMEYQGPSGEFMGINSEISHWVAEQLGLTIEGVPFDR--WSSLLEALK 557

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQA 152
             +ID +  +   T  RE  +   F    +    G + +  +  + ++SQ+SG  + +  
Sbjct: 558 QGEID-IVGSVAHTPEREREM--LFTTPYWPSPWGLVTNLSQVTVFNLSQMSGKRLAIVE 614

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G      L    KA  +    ++         A    + DA+ 
Sbjct: 615 GYHLIANL--MNKALGI--ELVIVPNSRAGVDAVAQGKADAFI 653



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 60/196 (30%), Gaps = 14/196 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F +    L +    SF  +A    + +    L  G       +  V  NGD KG  
Sbjct: 1   MIARFVMGTAALTLSLMLSFQVSA---EEQQAPLVLVMG--EDSYPYQFVDENGDVKGVL 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  R  SS        + ++  + ++    L     DI       T  R+     A   
Sbjct: 56  VDLWREWSSQT---QVPVVFVARHWQDSLKQLAQGDADIHI-GLGITKERDKDFDFAAPI 111

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   ++ +  KG  S S L    I +  G++ E  L               +    
Sbjct: 112 AYVSTYL-YVRNTLKGKKSFSDLQPYRIGIVTGSSHESILNQQV----NGLSYRYYNSRA 166

Query: 181 EIDAAYRAHRCDAYTG 196
           E+     A   D + G
Sbjct: 167 ELLRGVVAGEVDVFAG 182



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 74/247 (29%), Gaps = 17/247 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
               L     TG+  F +   +G+  G  +D  +  S     +   +++ P   ++    
Sbjct: 253 DANTLVIATTTGIQPFVDTGGDGEPHGLYIDIWKLWSKKTGIE---VEFRPAAMEDGLDE 309

Query: 92  LQSKQIDILSR-NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           L+  + DI        T+   ++             + F   K   I+S+ +L G  +  
Sbjct: 310 LKFHRADIHVGYPESDTMKTNLTRAW---RTYQVKSRLFSYGKA--INSLDELKGKRVGA 364

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                      D  K         ++  V ++  A +     A+    +      L  + 
Sbjct: 365 VPTAPYL----DKLKQALPNSELKLYTDVTQMIQAAQQGHIAAFVAASAWTQHYLLRAES 420

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
            S+      +   + +       D      ++     +  AE   I     N+   D  +
Sbjct: 421 WSDFHQYRKLAFTTDIYALTRNEDKGLAQRIAAGFRLISNAELAAIE----NKWILDRDD 476

Query: 271 PDVQRFL 277
             VQ  L
Sbjct: 477 RSVQSLL 483


>gi|126666595|ref|ZP_01737573.1| Signal transduction histidine kinase [Marinobacter sp. ELB17]
 gi|126628983|gb|EAZ99602.1| Signal transduction histidine kinase [Marinobacter sp. ELB17]
          Length = 947

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 67/234 (28%), Gaps = 18/234 (7%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  L  +K    L     T    F   + +G   G   D    L + +      +++  
Sbjct: 295 SARDLAWLKNNANLVVAYRTDWPPFEFQQ-DGKPAGLVPDLMSRLEAKLG-----VRFQN 348

Query: 83  LNAKERFLA---LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GIS 138
                R  A   L++ ++DIL      +    I     F            +      I 
Sbjct: 349 TMPTSRLQAEEQLKTGEVDILPG---ISRTPRIEQDFLFTRPYLTVPIALAIRDDGRFIG 405

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            + +L    + V           DY   ++   +      VEE   A      D     I
Sbjct: 406 DLRELRQEKVGVVNRHAAH----DYLLINHPNLNIYPMTNVEEGLLALSNGDLDVMVTHI 461

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            A+          +  +          L  A+ + + +   I++    +M + E
Sbjct: 462 PAVSYTVTRLGLTNLRITSVTPYEYE-LRLAVRKDNPDLQRILNKALSSMESLE 514


>gi|329298001|ref|ZP_08255337.1| ABC transporter, substrate binding protein [Plautia stali symbiont]
          Length = 330

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 19/227 (8%)

Query: 34  GFLKCGINTG-LVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G+L    +           ++     G D D  R L+ ++     K++ +P   ++  L 
Sbjct: 21  GYLTVATSANNSPPIGLWASDNKTLIGSDPDIARLLADSLG---LKLRLVPAAWEDWPLG 77

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASI 148
           + + + D+   N   T  R+      F      D   F +    K   I     ++G  I
Sbjct: 78  ITAGRYDVAMFNIAVTEERK--QKFDFA-TYRADNHAFAVKADSKISAIRRREDVAGKRI 134

Query: 149 CVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L  + + +  +      PI          A  + R DA  G      A+
Sbjct: 135 IVGSGTNQERILLSWDEKNRAQGLAPVQPIYLNDDASATLALLSGRADASFGPQ----AM 190

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
                       L D    +P   +  +    W +  S    A++ A
Sbjct: 191 AAWKVASRGQTKLSDTDRFAPGWRSPRRRAMAWTSRCSRRSTALLLA 237


>gi|291547159|emb|CBL20267.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Ruminococcus sp. SR1/5]
          Length = 258

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 6/102 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +G L    N     +     +    G DVD  +A+   +  +   ++   +       +
Sbjct: 163 SKGTLTMATNATFQPYEYYDGD-KIVGIDVDIAQAVCDKLGYE---LKVEDMEFDAIVNS 218

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           ++S + D  +     T  R+    + F        Q  I+ K
Sbjct: 219 VKSGKADFGAAGMTVTEDRKK--SVDFTDPYTTAEQVVIVKK 258


>gi|182438506|ref|YP_001826225.1| putative amino acid ABC transporter substrate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178467022|dbj|BAG21542.1| putative amino acid ABC transporter substrate-binding protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 300

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 75/245 (30%), Gaps = 13/245 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +L          +T    L  ++K+GF++         +  V+   + KG      R +
Sbjct: 27  GLLTACSKTDAGSATGEGALDKLRKQGFVRVAY-ANEAPYGYVEGK-ELKGEAPTLHREI 84

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
             A+  D  K              LQ+ + D++S     T  R       F    +    
Sbjct: 85  FKALGVDELKPTLS--EWDGLIPGLQAGKYDVVSAGMAITPER--CDNAIFSEPEFISPT 140

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAA 185
             ++ K      ++ L+ A             +   +       +      ++ ++   A
Sbjct: 141 ALMVRKGNP-KKITDLASAKEAGITVGVMSGAVEGSYAKGAGIAEDKIKTLQKPQDGADA 199

Query: 186 YRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIV 241
            +  R DA+    IS  +  K   D       +P +  K   SP      +G+ +  +  
Sbjct: 200 VKGGRVDAFLLTGISLRWLAKTNPDTEVTEAFVPQLDGKAQFSPGGAVFRKGNEDLRDSF 259

Query: 242 SWTHY 246
           +    
Sbjct: 260 NRELK 264


>gi|315179284|gb|ADT86198.1| amino-acid abc transporter binding protein [Vibrio furnissii NCTC
           11218]
          Length = 481

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 81/262 (30%), Gaps = 18/262 (6%)

Query: 5   FFVSILCLI----ILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            F    CL      L  +  S          +K +G L+  ++  L GF  V   G  KG
Sbjct: 8   LFALACCLGWPAHSLELSPLSAKPYTGDWPALKDKGTLRVVVSADL-GFYYV-EGGRPKG 65

Query: 59  FDVDFCRALSSAIFDD--PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
              +        +        +Q +P+   E   +++    D+   N   T  R   +  
Sbjct: 66  IGAELLYHFEQYLKKQSPYVHVQIIPVLRDELIPSVERGFADLAVANLTITPHRLQQVDF 125

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIV 175
           +                   IS++ QLSG  I ++  ++   ++         MK   + 
Sbjct: 126 SAPLTKDLQEFVITSKAAAPISTLEQLSGRQIWLRESSSYWDSIQAVNATLRAMKRPLVE 185

Query: 176 FERVEEIDAAY------RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
              ++E    Y       A    A   D       +   +    H  LP +     +A A
Sbjct: 186 VHFIDEALQDYELLEMVNAGHVAATVLDSHKAELWQHVMENIQVHSELP-LRENGQIAWA 244

Query: 230 IIQGDTEWYNIVSWTHYAMVTA 251
           + +   +   +++     + + 
Sbjct: 245 LRKESPKLKTLINQYLKTVKSG 266


>gi|282856550|ref|ZP_06265824.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
 gi|282585616|gb|EFB90910.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
          Length = 521

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 61/209 (29%), Gaps = 13/209 (6%)

Query: 39  GINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
           G + G V +  +    +    GF++D   AL+  +   P   +++          L    
Sbjct: 33  GDSEGNVPYMFMDPRDDKIMIGFEIDIVDALAERMGMTP---KFVHNGWDNLIPGLNLGL 89

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
            DI     + T   +  +  +      F            I S+    G  +     +  
Sbjct: 90  YDIALSGLEITPEHKEEVDFSLPYYKTFLQLVVQRGNPAEIKSLQDCVGKRVGTLKQSYA 149

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
             TLAD             ++            R DA   D          N   ++   
Sbjct: 150 FFTLADA-----GVDEIRTYDNEINAYQDMAHDRLDAVLMDSPIAIFYAGFN---TDLEF 201

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           + + I +      + +G+TE  + ++   
Sbjct: 202 VGEPIGEISYGIPVRKGETELLDKLNAAL 230


>gi|296110573|ref|YP_003620954.1| putative amino-acid ABC transporter binding protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295832104|gb|ADG39985.1| putative amino-acid ABC transporter binding protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 272

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 61/199 (30%), Gaps = 12/199 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G        +    +    GFDV+  +  +        +++++  +    +  L + 
Sbjct: 45  ITLGSTGASFPSSYKSGD-KLVGFDVEVAQKAAKLAGY---RVKWVNADFDGLWGQLDTN 100

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++  ++    +T  R+      F    Y D     +        +S L    +   AG+ 
Sbjct: 101 RVQGIANAVSFTPERQA--KYQFTDAYYNDEAKVAVPTSSKAKKLSDLDNQKVAGVAGSN 158

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               L     + N       FE  +    A  + +          L A         +  
Sbjct: 159 NITALQ----SVNKSIVVAPFENRDSATQAVLSEKVAGVVNSGPILSA--TIKKNHLKLR 212

Query: 216 ILPDIISKSPLAPAIIQGD 234
           +LPD I K+ +     + D
Sbjct: 213 LLPDTIQKTKVGIVFKKDD 231


>gi|225388140|ref|ZP_03757864.1| hypothetical protein CLOSTASPAR_01875 [Clostridium asparagiforme
           DSM 15981]
 gi|225045801|gb|EEG56047.1| hypothetical protein CLOSTASPAR_01875 [Clostridium asparagiforme
           DSM 15981]
          Length = 305

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 77/254 (30%), Gaps = 53/254 (20%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----------------ASILG--------------- 28
           M K   +++    I   ++ ++                   S L                
Sbjct: 1   MNKKLLLTLAFSFISLLSACASAPKAESPAETAEIATIALNSSLDLSQEGRQPILPQEYD 60

Query: 29  -----DIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
                +I ++  L  G+       F     +G   G DV+    +++  F    ++    
Sbjct: 61  KPFVREILEKDSLVVGMLEEDRPPFFYHTGDGSMDGLDVEISLGIAN-TFGVELELDRTA 119

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-------- 134
            + +E +  L   + D++      T  R  ++G++F        Q F+++KK        
Sbjct: 120 RSNQELYENLAQGRYDMVMSKFSMTPER--AMGVSFSTPYVTLRQSFLVNKKLAAQYGVA 177

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
                  +  GA+I    GT+ E  +   F          V++ +  +  A       A 
Sbjct: 178 DYPYDHLREPGAAIGTVEGTSYERFVRQNFPEA----DVRVYQDIPSMVEAVVGEEVFAA 233

Query: 195 TGDISALYALKLTN 208
             D        + N
Sbjct: 234 VYDDLTFVQAIMKN 247


>gi|206901704|ref|YP_002251765.1| ggdef domain/hd domain protein [Dictyoglomus thermophilum H-6-12]
 gi|206740807|gb|ACI19865.1| ggdef domain/hd domain protein [Dictyoglomus thermophilum H-6-12]
          Length = 770

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 63/213 (29%), Gaps = 14/213 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +   L    +  L     + + G  KGF VD    LS  I      I+   +   +    
Sbjct: 22  ENNTLILAGDFNLPPIEYLDSQGVPKGFAVDIVNELSKKINKK---IEVKLVPWNDAVEL 78

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L + ++D +      T  R+                  ++     I +   L    + V 
Sbjct: 79  LNTGRVDGIEF-MRVTEERKKRYDFI---TYLESFSVIVVPVNSTIHNFMDLKERKVGVF 134

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
                +L L D           I ++   E+         DA   +      L   N+  
Sbjct: 135 NLDVAQLFLRDI-------TQTISYKSSYEVLLGVLRGEADAGVINYYTAKWLITQNNWN 187

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            +  ILPD +  +    A+ +G   +  +    
Sbjct: 188 DKLKILPDKLFTNYAGIALPKGSPYFLILKKGI 220


>gi|295700418|ref|YP_003608311.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia sp. CCGE1002]
 gi|295439631|gb|ADG18800.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Burkholderia sp. CCGE1002]
          Length = 280

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 80/259 (30%), Gaps = 9/259 (3%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M  K   ++    ++   +        L  ++++GF +  I      F  V A+G   G 
Sbjct: 1   MKLKGILIAGGLSLLTLASLAYAADDKLTQMRQQGFARIAI-ANEPPFTAVGADGKVTGA 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D  RA    +  +   +             L + + D ++     T  R  ++  +  
Sbjct: 60  APDVARAGFKKLGVN--DVVASVSEYGAMIPGLAAGRHDAIAAGLFMTPQRCAAVAYSQP 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIVFE 177
            +   +         K I +  +++     V    G TTE  LA    A+      ++  
Sbjct: 118 VLCAVEAFAVKKGNTKSIKTYEEIAKDPKAVIGVEGGTTEQKLA--TAANIPTDRVVIVP 175

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTE 236
             +      +  R D +   + ++  L      P+   I P   +       A  + DT 
Sbjct: 176 DGQSGLKMLQDGRIDVFALPLLSITDLLSKAKDPNLDSIAPVQNTPVQCDGVAFRKQDTA 235

Query: 237 WYNIVSWTHYAMVTAEELG 255
             +        M  + E  
Sbjct: 236 LRDAFDVELKKMKDSGEFA 254


>gi|221210005|ref|ZP_03582986.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
 gi|221170693|gb|EEE03159.1| extracellular solute-binding protein, family 3 [Burkholderia
           multivorans CGD1]
          Length = 312

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +     +       L
Sbjct: 63  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLVLVPIAWADWPL---GL 119

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I +      ++G  I 
Sbjct: 120 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTDSPIRAIAEPKDVAGLRII 176

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +          + F+       A  + R DA     ++L    
Sbjct: 177 TGAGTSQEHILLEWSRRNVAHGLKATELLYFDDDAAARVALLSGRADAELNPNASLAYEA 236

Query: 206 LTNDR 210
               +
Sbjct: 237 ARTGK 241


>gi|170695850|ref|ZP_02886991.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170139274|gb|EDT07461.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 286

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 66/247 (26%), Gaps = 35/247 (14%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    +   +  G   +      G   GF+ +    L   I     +   +  +      
Sbjct: 30  KDWKTVTIALEGGYAPWNLTLPGGKLGGFEPELVANLCERI---KLQCNLVAQDWDGMIP 86

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--------- 141
            LQ+ + D+L      T  RE  +   F          F +   K +             
Sbjct: 87  GLQAGKFDVLMDAISITPEREKIIA--FSKPYAATPATFAVADTKVLPKAPPGAAVVKLS 144

Query: 142 ---------------QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
                          QL G +I +Q+GT     + + FK         V++   E D   
Sbjct: 145 GDAKADQPTVDALRKQLKGKTIGIQSGTVYTKFINEGFK---DIATIRVYKTSPERDLDL 201

Query: 187 RAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
              R DA   D++   A     +          +   I       A  + D +       
Sbjct: 202 ANGRIDASFDDVTYYAANVDKKETASISMAGPKIGGPIWGPGEGLAFRKQDADLKAKFDT 261

Query: 244 THYAMVT 250
              A + 
Sbjct: 262 AISAALA 268


>gi|126737937|ref|ZP_01753667.1| putative extracellular solute-binding protein [Roseobacter sp.
           SK209-2-6]
 gi|126721330|gb|EBA18034.1| putative extracellular solute-binding protein [Roseobacter sp.
           SK209-2-6]
          Length = 282

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 79/260 (30%), Gaps = 11/260 (4%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKG 58
           M    F ++   +     ++ S  A  L D    G  ++ G +  +  +     +G+ KG
Sbjct: 1   MTCTLFKALGTAVAATVLSTVSVFAGPLEDRIAAGEPIRIGFS-NIPIWGFPDEDGNAKG 59

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F  +    + + +    ++++            L++ + D+++        R     +AF
Sbjct: 60  FVNEIALGILAEMG--HTEVETTVTEWGGLIPGLKANRYDMITGGLYILNSR--CQNIAF 115

Query: 119 RPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                  G  F++       I++   +      V    +   T+    K        +  
Sbjct: 116 SEPIGSMGDAFLVPAGNPKNINNYKDVLSNDGSVLIMYSGANTVEASRKEGLSDGQMMQV 175

Query: 177 ERVEEIDAAYRAHRCDAYT-GDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGD 234
               E  AA  A R DA       ALY    +  +                        D
Sbjct: 176 PGPTETLAAMNAGRADAAALTYFEALYLADQSEGKFEVTDPSALPEWTKNWVGIGFRDED 235

Query: 235 TEWYNIVSWTHYAMVTAEEL 254
            E+    +    + V ++ +
Sbjct: 236 AEFMAKFNAALASYVGSDAM 255


>gi|126730764|ref|ZP_01746574.1| putative ABC transporter amino acid-binding protein [Sagittula
           stellata E-37]
 gi|126708930|gb|EBA07986.1| putative ABC transporter amino acid-binding protein [Sagittula
           stellata E-37]
          Length = 278

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 14/216 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F V    L +L  T   ++A  L + + +G +   +         +   G+  G  
Sbjct: 1   MKTTFGVFAASLPVLVATGHMSHAITLEEAQAKGSVTVAVAIE-PPLTIMDGEGNLSGAI 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +  RA    +  D   I+ +  +       LQ+++ D+++         +    + F  
Sbjct: 60  PEVTRAALERLGID--TIEPVVTDWGSLIPGLQARRFDMIAAGLYI--RPDRCAAILFAE 115

Query: 121 ITYFDGQGFIMH-----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                   F+            + V+      + V  G + E    D   A   +   + 
Sbjct: 116 PDSCAVDVFVHKTDMADAPASFADVAANPELKLGVCGGCSQE---KDALAAGVSRDQLVP 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDR 210
               +       + R D +     SA  A+  +   
Sbjct: 173 INDPQGGLDLLMSDRIDLFAFPDLSANAAVVASGAD 208


>gi|317047286|ref|YP_004114934.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316948903|gb|ADU68378.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 295

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 55/227 (24%), Gaps = 25/227 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL--------------GDIKKRGFLKCGINTGLVG 46
           M K    + + L +    SF+  A  L               +IK  G +    N     
Sbjct: 1   MKK--ITTAIALALGLTASFAQAADTLPTQKVDQALHDRLPAEIKSAGKMIAVNNGSFPP 58

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +  V       G   D   AL   +           L+       + S +  +       
Sbjct: 59  YEIVNGPHSMDGASADLSVALGQLLGVKIEHATVSGLSG--VLAGINSGRYQLAIGPIG- 115

Query: 107 TLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--- 162
               +    + F          G        I+ +    G  I V A  + E  +     
Sbjct: 116 -DYPDRQEKVDFIDFVQEFVVFGVQKGNPAKINGLDDTCGKRIAVMAAGSAEQVIRKQSD 174

Query: 163 -YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               A         F        A R+ R DA+    + L       
Sbjct: 175 VCVAAGKPAVVVQSFTDQPSSILAVRSKRSDAFFSSQAPLTYFVEQA 221


>gi|108799370|ref|YP_639567.1| extracellular solute-binding protein [Mycobacterium sp. MCS]
 gi|119868484|ref|YP_938436.1| extracellular solute-binding protein [Mycobacterium sp. KMS]
 gi|108769789|gb|ABG08511.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. MCS]
 gi|119694573|gb|ABL91646.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 222

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 77/224 (34%), Gaps = 30/224 (13%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L+ GI      F      G   G DVD   A++ A+ D    + Y  ++  E   AL 
Sbjct: 8   GTLRVGIVVPNPPF-----TGMPGGLDVDLANAIADALGDRAEFVDYRTVD--EVLEALG 60

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQ 151
           S  +D  +     T        +AF P     GQ   +  +    + SV +L G ++ VQ
Sbjct: 61  SGDVDCAAGGLTATDGP-----VAFAPPYLIAGQALAVDAENHPNVHSVDELDGLTVAVQ 115

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  E        A  +K      +R            CDA       L          
Sbjct: 116 RGSAAERF------AAQLKGPVKRCDR-------LDIDGCDAIVALAPVLTEY---AKGR 159

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S+  ++   +S   +A A+   D +  + ++     +  A  L 
Sbjct: 160 SDVDVVQKGLSVEHIALAVAGHDQQMLSRITVAQAELEEAGTLQ 203


>gi|255264403|ref|ZP_05343745.1| extracellular solute-binding protein, family 3 [Thalassiobium sp.
           R2A62]
 gi|255106738|gb|EET49412.1| extracellular solute-binding protein, family 3 [Thalassiobium sp.
           R2A62]
          Length = 269

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 62/199 (31%), Gaps = 17/199 (8%)

Query: 1   MYKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDW 56
           M +  F ++   L                L +    G L     N     +         
Sbjct: 1   MKRLAFATLGFALSATTAMAAGHCAGGKTLTE----GKLTIATGNPAYYPWVLDDDPASG 56

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISL 114
            GF+     AL+  +  D + + ++  +      A+Q      DI  +    T  R+  +
Sbjct: 57  NGFEAAVAYALAGEMGFDAADVVWVRSSFD---EAIQPGVKNFDINMQQFSITPERDEIV 113

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +  P  Y      +    +  +++  L           T+   L    + +     P+
Sbjct: 114 DFS-TPYYYAPMAVLLSGNAQADATLDGLKDLVWGAVGSHTSTPMLTGTIQPN---TDPL 169

Query: 175 VFERVEEIDAAYRAHRCDA 193
           ++    ++ AA +A + DA
Sbjct: 170 LYGDNADVTAAMQAGQIDA 188


>gi|77461610|ref|YP_351117.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77385613|gb|ABA77126.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 192

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 49/133 (36%), Gaps = 8/133 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F   ++CL+ L   S   +A ++ D+  RG L+  +      F     +    GF+V+ 
Sbjct: 2   RFLPGLICLLPLL--SPLAHAELIDDVNDRGELRIALEANTPPFNFKDGD-TLTGFEVEL 58

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L++ +     +  ++  +  +    ++S + D+   +   T   E+           
Sbjct: 59  GQLLANEL---DVRADFIVTDEADLLQGVESGKYDVALNHIALTP--ELKDRFDVSEPYT 113

Query: 124 FDGQGFIMHKKKG 136
                 +  K + 
Sbjct: 114 QVNAQLLAKKDEQ 126


>gi|325972548|ref|YP_004248739.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy]
 gi|324027786|gb|ADY14545.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp.
           Buddy]
          Length = 281

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/263 (10%), Positives = 72/263 (27%), Gaps = 23/263 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW- 56
           M K   + ++ L+ +     +          +   L+  +  G   +       ANG   
Sbjct: 1   MKKTTVLLVVLLLSVSGLLIAQGKQEAPAASQAKVLRVAMECGYAPYNWTQTTNANGAVP 60

Query: 57  --------KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + ++  +      ++ + L+      A+QS  +D +      T 
Sbjct: 61  IANSKDFAYGYDVMMAKLIAERLGY---ALEIVKLDWDSLVPAVQSGTVDCVIAGQSITS 117

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+    + F    Y+     + +     +S + ++  +          +          
Sbjct: 118 ERKQM--VDFTSPYYYASIVCLTNGDSKYASATGITDLAGGSATSQLGTIWYDTCLPQIP 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS---- 224
                   E    +  A  + R D    D+    A  +                      
Sbjct: 176 NAKILPAQESAPAMLVALNSKRVDFICTDMPTAKAAIIAYPSMKILDFAGSKDDFQVSEE 235

Query: 225 --PLAPAIIQGDTEWYNIVSWTH 245
              +  ++ + + E    ++   
Sbjct: 236 EINIGISVSKKNPELTKAINSLL 258


>gi|209547514|ref|YP_002279432.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538758|gb|ACI58692.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 282

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 83/264 (31%), Gaps = 17/264 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   + +S + L +L   +    +     L  +K++GF +  I      F  V A+G   
Sbjct: 1   MKAGYVLSAVSLSVLLAAAAGPASAADDKLEQLKEQGFARIAI-ANEPPFTAVGADGKVS 59

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   D  R +   +                    LQ+ + D ++        R     +A
Sbjct: 60  GAAPDVARVIFEKLGVKEVVASIS--EYGAMIPGLQAGRHDAITAGLFMKPER--CNAVA 115

Query: 118 FRPITYFDGQGFIMHKKKGI-----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +      D + F + K   +       ++    A I    G T E       +A   +  
Sbjct: 116 YSEPILCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEEKLA---LEAGVPRDR 172

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231
            IV    +      +  R D Y+  + +++ L    + P+   + P + +       A  
Sbjct: 173 VIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFR 232

Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255
           + D    +        +  + E  
Sbjct: 233 KQDVALRDAFDVELKKLKESGEFA 256


>gi|254248370|ref|ZP_04941690.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
 gi|124874871|gb|EAY64861.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Burkholderia cenocepacia
           PC184]
          Length = 310

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +     +       L
Sbjct: 61  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLVLLPITWADWPL---GL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+       ++G  I 
Sbjct: 118 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTASPIAKIAEPKDIAGLRII 174

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ K +  +       + F+       A  + R DA     ++L    
Sbjct: 175 TGAGTSQERILLEWSKRNVAQGLKPAELLYFDDDATARVALLSGRADAELNPNASLAYEA 234

Query: 206 LTNDR 210
               +
Sbjct: 235 ARTGK 239


>gi|161520733|ref|YP_001584160.1| extracellular solute-binding protein [Burkholderia multivorans ATCC
           17616]
 gi|189353082|ref|YP_001948709.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344783|gb|ABX17868.1| extracellular solute-binding protein family 3 [Burkholderia
           multivorans ATCC 17616]
 gi|189337104|dbj|BAG46173.1| polar amino acid transport system substrate-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 312

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +     +       L
Sbjct: 63  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLVLVPIAWADWPL---GL 119

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I +      ++G  I 
Sbjct: 120 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTDSPIRAIAEPKDVAGLRII 176

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +          + F+       A  + R DA     ++L    
Sbjct: 177 TGAGTSQEHILLEWSRRNVAHGLKATELLYFDDDAAARVALLSGRADAELNPNASLAYEA 236

Query: 206 LTNDR 210
               +
Sbjct: 237 ARTGK 241


>gi|54293050|ref|YP_125465.1| hypothetical protein lpl0087 [Legionella pneumophila str. Lens]
 gi|53752882|emb|CAH14317.1| hypothetical protein lpl0087 [Legionella pneumophila str. Lens]
          Length = 242

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 82/248 (33%), Gaps = 28/248 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +  F+ ++ +    F                  L  G+      F      G+ + GF
Sbjct: 1   MKRFMFILLIFINFHAFG---------------KALIIGVPDFAPPFVSRSGGGEFYFGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   ++   I     + QY  +N ++ +  L + ++DI+   T             F 
Sbjct: 46  NIDLMNSICKII---EEECQYKGMNIQQLYTNLNTGKVDIMLAPTPIVST--AGTNYIFS 100

Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                     +       I++++ L G  +     T     L ++F+ +      + F +
Sbjct: 101 LPYLPSNAQIVTLKTNDHINALTDLKGKKVGTLKYTLYGGLLQEHFQDY---VDLMQFSK 157

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237
           + ++  A    + +A   +  A  A    ++  +E   + D I   +      ++ +   
Sbjct: 158 LPDMAIALSNRQIEAVVLN--ANAAKYAMSNSATELKFVGDPIPIGNGYGILALKNNAPL 215

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 216 IMKINKAL 223


>gi|309789937|ref|ZP_07684513.1| putative extracellular solute-binding protein [Oscillochloris
           trichoides DG6]
 gi|308227957|gb|EFO81609.1| putative extracellular solute-binding protein [Oscillochloris
           trichoides DG6]
          Length = 289

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 72/240 (30%), Gaps = 22/240 (9%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             +++R  ++ G       FA  + N    G   +  RA+   I    S+I ++     +
Sbjct: 33  ETVQRRDQIRIGYAVE-APFAFTRENRRVTGESPEVARAVVERIG--ISQITWVQTEFDQ 89

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
               L++ + D+++     T  R   +   F   T+   QG ++     I +   L    
Sbjct: 90  LIPDLRNGRFDVIAAGMFITPERAQLVA--FSEPTFHVQQGLLV----QIGNPHNLHSYE 143

Query: 148 ICVQAGTTTELTLADYFKAHNMK------YHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
             VQ G      L    +    +       + I    +     A  +   DA+      L
Sbjct: 144 QAVQRGEIRIAVLDGSIEERIFQHMGIKPENLIAAPDIPTARVAVESDLADAFAISAPTL 203

Query: 202 -------YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
                  Y  +L    P                 A  Q D    +       ++V + E 
Sbjct: 204 RWLVKYEYVPQLEVATPFVQPNPASTAGLGYGGFAFRQEDDALRSAWDRALSSLVNSSEH 263


>gi|270156573|ref|ZP_06185230.1| bacterial extracellular solute-binding protein [Legionella
           longbeachae D-4968]
 gi|308051554|ref|YP_003915128.1| putative amino acid ABC transporter, periplasmic binding protein
           [Legionella longbeachae NSW150]
 gi|269988598|gb|EEZ94852.1| bacterial extracellular solute-binding protein [Legionella
           longbeachae D-4968]
 gi|288859979|emb|CBJ13964.1| putative amino acid ABC transporter, periplasmic binding protein
           [Legionella longbeachae NSW150]
          Length = 247

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 83/269 (30%), Gaps = 27/269 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +F+  +C+ I       +             L+  ++     F    AN    G+D
Sbjct: 1   MKLIYFLLSVCVFIAQPLRAQSEP-----------LRVAVDPVNPPFVMRGANNQLYGYD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V     +   I       Q++P    +    +  K++D+ + +   T  R     + F  
Sbjct: 50  VSMMEYICKTI---QRPCQFIPTRFDKMLHEVSIKKVDVATSSITITAERSKM--VNFSF 104

Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   F+  KK    S  +  L+   I +  G+     L    K   +K   I +  
Sbjct: 105 PYLLSKTRFVGPKKLANQSFGRELLNYRKIGITEGSIYPDFL---LKMEVIKPIIISYTN 161

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-QGDTEW 237
              +  A      +    D     AL   +    +  +L    S       +    + + 
Sbjct: 162 SNNLIEALNRGEINFGLMDEPT--ALYWQSHSAQKFAVLGPSFS---YGFGLGIAVNKDN 216

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSK 266
             ++   + A++  +E    ++N N    
Sbjct: 217 LTLLQSINNALLKYQESDDFKRNYNAYMA 245


>gi|195978684|ref|YP_002123928.1| amino-acid ABC transporter extracellular-binding protein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195975389|gb|ACG62915.1| amino-acid ABC transporter extracellular-binding protein precursor
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 275

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 67/258 (25%), Gaps = 22/258 (8%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     +  L   +      +++       +++  ++   +     F          G
Sbjct: 1   MTKQLQRALFFLLASLGLLAVVTSHEVT---ARQKEVIRVATDAATKPFTYR-KKHSVTG 56

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D++  + +         ++    +        + + +  I + N  ++  R       F
Sbjct: 57  YDIEVLKRVFK--GSKKYRLSIEVVPFPSILAGIDAGRYQIGANNFGYSKERAA--KYLF 112

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                          K+   S++ LSG      AG+   L L  + ++H     PI    
Sbjct: 113 SSPISASHYALATKGKQQYKSLADLSGKKTQGIAGSNYMLILEKWNQSH-PDQKPIHLTY 171

Query: 179 VEEI------DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLA 227
             E              + D    D  +L  +            L +             
Sbjct: 172 ASESTPLTQRLQQLENGQLDFLFYDAISLTTVAEEQGFDVHVTKLKEQADTAKDGLEYYV 231

Query: 228 PAIIQGDTEWYNIVSWTH 245
            A  Q        V+   
Sbjct: 232 FANDQKGKALQRFVNKRL 249


>gi|303247089|ref|ZP_07333364.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
 gi|302491515|gb|EFL51400.1| extracellular solute-binding protein family 3 [Desulfovibrio
           fructosovorans JJ]
          Length = 279

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 79/275 (28%), Gaps = 35/275 (12%)

Query: 1   MYKD---FFVSILCLIILFFT------SFSTNASILGDIKKRG-FLKCGINTGLVGFAEV 50
           M K      VS L    +         +   +  +       G  ++ G ++    ++  
Sbjct: 1   MGKLWGYLAVSALAACGVIVALLYIRGADQASGPVW-----SGPEIRIGYSSE-APYSFR 54

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             +GD  G   +  +A+   I      I+++ L+  +    L + +ID+++     T  R
Sbjct: 55  AKDGDVTGQSPEIAKAVLEKIGV--GPIRWVLLDFGKAIPELLAGRIDMIANGLFITPYR 112

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL------ADYF 164
                + F         G ++ +     +   L   +   +    T   L      A+  
Sbjct: 113 AA--KVLFSLPYSRVLPGLLVRRG----NPRDLHSYAEVARKVDVTAAVLDGSVEQAELT 166

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDI 220
                     V        AA RA R D        +      +             PD 
Sbjct: 167 ALGMPPRRLFVVPDPMAGLAAVRAGRADCLALSSPTVSWFAHQSPDEVAVAEPFYEAPDA 226

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +     A A    D +  + V+    + +   E  
Sbjct: 227 VPGES-AFAFRAADRDLADRVNAALRSYIGTPEHE 260


>gi|254504432|ref|ZP_05116583.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
 gi|222440503|gb|EEE47182.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia
           alexandrii DFL-11]
          Length = 265

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 63/211 (29%), Gaps = 15/211 (7%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 F      G   GF++D  RAL   +            + +    AL  ++ D +
Sbjct: 42  TDNFPPFVFRDPQGRLTGFNIDLSRALCQEL---AISCALKIKDFEVLIPALDEEEGDAI 98

Query: 101 SRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
                       + GL F         +  +          S   G ++ VQAGT  E  
Sbjct: 99  ISGLS--RYSPQARGLTFTDDYMKLPARVIVSDSADTNFGDSPKPGQTVAVQAGTRYEAF 156

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVI-- 216
              ++         + F    E   A +    DAY GD +S  + L+             
Sbjct: 157 ARKFWP----GADILGFSSTAEAREAVKDGTADAYFGDGLSLSFWLRSPAAESCCRFAGG 212

Query: 217 --LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             L        +A A   GDTE    +++  
Sbjct: 213 PWLEPGYFGEGMAIATRSGDTERAAALNYAL 243


>gi|134293671|ref|YP_001117407.1| extracellular solute-binding protein [Burkholderia vietnamiensis
           G4]
 gi|134136828|gb|ABO57942.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 310

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I       +          G D D+ + ++ A+      +     +       L
Sbjct: 61  GAFTVAIAPHAPPVSTYATDARTVVGADPDYAQLVADALGRALLLVPIAWADWPL---GL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+       ++G  + 
Sbjct: 118 ASGKYDAVISNVGVTEKRKE--KFDFT-TYRLGLHGFYVRSASPIARIAEPKDIAGLRVI 174

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ + +  +      P+ F+       A  + R DA     ++L    
Sbjct: 175 TGAGTSQERILLEWSRRNVAQGLKATEPLYFDDDAAARVALLSGRADAELNPNASLAYEA 234

Query: 206 LTNDR 210
             + +
Sbjct: 235 ARDGK 239


>gi|150017738|ref|YP_001309992.1| extracellular solute-binding protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904203|gb|ABR35036.1| extracellular solute-binding protein, family 3 [Clostridium
           beijerinckii NCIMB 8052]
          Length = 287

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 92/259 (35%), Gaps = 19/259 (7%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD 73
           +  T+ S     L  IK++G +        V +  +  +    +G + D    + S +  
Sbjct: 33  VIVTNVSEQKDRLQLIKEKGEITVASPQNDVSYFYIDPSTKKLEGTEADIITEIGSRLG- 91

Query: 74  DPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
             SKI+            L +   IDI S     T  RE  +   F    Y   +  ++ 
Sbjct: 92  -ISKIETRNSPFVNLLDKLNTDDSIDIASGGIFITPEREKIVA--FTQPIYKATEAVVVP 148

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
               I+  S L  A + V+ GT  E  + + +K   +     +FE   E+  A    + D
Sbjct: 149 TFSNINFKSDLKNAVVGVEKGTVYES-MGERWKNDKIIKDITIFENSTELLDAIYKRKID 207

Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW-------- 243
           A   D   +    L N   P   +   +      +A A+   D    N ++         
Sbjct: 208 AGLVDSVIVKYSLLKNKNIPLRILKDYNPELSGNIAIALRNNDKTLLNALNEKIKEMKAD 267

Query: 244 -THYAMVTAEELGITQKNI 261
            T YA++   E G+ + N+
Sbjct: 268 GTLYAILV--ENGLDKSNM 284


>gi|262165010|ref|ZP_06032748.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio mimicus VM223]
 gi|262027390|gb|EEY46057.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio mimicus VM223]
          Length = 461

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 81/255 (31%), Gaps = 14/255 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              + +L L    F+S    A       ++  L    +     ++ +   G   G  +DF
Sbjct: 8   KLSLMLLVLCSFLFSSVVNAA-------EQQKLIIANSKAWKPYSYIDDQGKPSGILIDF 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A       +   I++  ++  +   A++  + D +      +  RE    L F     
Sbjct: 61  WLAFGQ---VNNVDIEFKLMDWNDSLEAVKYGKAD-IQAGLIRSPSREKY--LDFGEPLL 114

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  +H++     + QL   ++ V  G        ++ + H        +   E + 
Sbjct: 115 EIDTQLYVHQRFLGEKLGQLLAGNLDVAIGIVKGGFEQEFAQEHFPHIALTEYVNNELLM 174

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A      DA+  D        +  D   E +    + S   L PA+ + +    N +  
Sbjct: 175 QAVNRGELDAFIADSQVANFYIVIADGAKEFMPAQFLYSAE-LRPAVAKDNMRLLNQIDE 233

Query: 244 THYAMVTAEELGITQ 258
               + T E+  I  
Sbjct: 234 GFTRLTTNEKNRILS 248


>gi|312196904|ref|YP_004016965.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c]
 gi|311228240|gb|ADP81095.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c]
          Length = 292

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 34  GFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L    ++      F+         G++     A++  +     +++++     + F A
Sbjct: 57  GQLTVATDSPAYDPWFSNNDPTNGL-GYESAVAYAVAGQLGFTKDQVKWVSEPFDKSF-A 114

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASI 148
             +K  D        T   +    + F    Y   Q  +  K   I    S++ L  A +
Sbjct: 115 PGAKNFDFDVNQISITA--DRKQAVDFSTGYYDVAQAIVALKSSKIAGAKSLADLKDAKL 172

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA-LYALKLT 207
               GTT+   + +  +         VF  V +  +A    + D    D+    Y     
Sbjct: 173 GAPVGTTSLDAITEKVR---PTTPAAVFNDVNDAKSALENGQIDGIVVDLPTGFYLTAAE 229

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            D        P   +         +G+    N+
Sbjct: 230 IDNSVIVGQFPSTGTPEQFGLLFEKGNPLVKNV 262


>gi|326779152|ref|ZP_08238417.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces cf. griseus XylebKG-1]
 gi|326659485|gb|EGE44331.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces cf. griseus XylebKG-1]
          Length = 300

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 75/245 (30%), Gaps = 13/245 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +L          +T    L  ++K+GF++         +  V+   + KG      R +
Sbjct: 27  GLLTACSKTDAGSATGEGALDKLRKQGFVRVAY-ANEAPYGYVEGK-ELKGEAPTLHREI 84

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
             A+  D  K              LQ+ + D++S     T  R       F    +    
Sbjct: 85  FKALGVDELKPTLS--EWDGLIPGLQAGKYDVVSAGMAITPER--CGNAIFSEPEFISPT 140

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAA 185
             ++ K      ++ L+ A             +   +       +      ++ ++   A
Sbjct: 141 ALMVRKGNP-KKITDLASAKEAGITVGVMSGAVEGSYAKGAGIAEDKIKTLQKPQDGADA 199

Query: 186 YRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIV 241
            +  R DA+    IS  +  K   D       +P +  K   SP      +G+ +  +  
Sbjct: 200 VKGGRVDAFLLTGISLRWLAKTNPDTEVTEAFVPQLDGKAQFSPGGAVFRKGNEDLRDSF 259

Query: 242 SWTHY 246
           +    
Sbjct: 260 NRELK 264


>gi|126435027|ref|YP_001070718.1| extracellular solute-binding protein [Mycobacterium sp. JLS]
 gi|126234827|gb|ABN98227.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 222

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 77/224 (34%), Gaps = 30/224 (13%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L+ GI      F      G   G DVD   A++ A+ D    + Y  ++  E   AL 
Sbjct: 8   GTLRVGIVVPNPPF-----TGMPGGLDVDLANAIADALGDRAEFVDYRTVD--EVLEALG 60

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQ 151
           S  +D  +     T        +AF P     GQ   +  +    + SV +L G ++ VQ
Sbjct: 61  SGDVDCAAGGLTATDGP-----VAFAPPYLIAGQALAVDAENHPNVHSVDELDGLTVAVQ 115

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G+  E        A  +K      +R            CDA       L          
Sbjct: 116 RGSAAERF------AAQLKGPVKRCDR-------LDIDGCDAIVALAPVLTEY---AKGR 159

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           S+  ++   +S   +A A+   D +  + ++     +  A  L 
Sbjct: 160 SDVDVVQKGLSVEHIALAVAGHDQQMLSRITVAQAELEEAGTLQ 203


>gi|86360355|ref|YP_472243.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CFN 42]
 gi|86284457|gb|ABC93516.1| probable octopine ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 280

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 60/239 (25%), Gaps = 33/239 (13%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +      +    A+G   GF+ +  + L         +   +  +      AL + +
Sbjct: 30  TITLEGAYAPWNLTNADGTLGGFEPELAKVLCERA---KIECTLVASDWDGMIPALNAGK 86

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---------------- 140
            D++      T  R     + F          F   K   ++                  
Sbjct: 87  FDVIMDALSITEER--RQVIDFTIPYAATPAAFATAKDSPLAKAAGTGATIKMTPGQTGV 144

Query: 141 -------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                      G +I +QA T     + D F           ++   + D   +  R D 
Sbjct: 145 KEIDALKEAFKGKTIGIQAATVYAKFVYDNF---GDIAEIREYKTGADRDLDLQNGRIDL 201

Query: 194 YTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D           +   +     +   I        I + DT+  +  +    + + 
Sbjct: 202 GFDDAVYFANAFQAANGALDFTGPEIVGSIWGEGEGLGIRKADTDLRDKFNVAIKSALA 260


>gi|152995931|ref|YP_001340766.1| histidine kinase [Marinomonas sp. MWYL1]
 gi|150836855|gb|ABR70831.1| histidine kinase [Marinomonas sp. MWYL1]
          Length = 560

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 78/206 (37%), Gaps = 16/206 (7%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +  G +     +  +  +G+  G++ +  RA++  +  +   ++    +  +    L+  
Sbjct: 33  IHVGGDLNYPPYEFINEDGEPDGYNTELTRAIAEVMGIE---VEIQLGSWDDIRSRLEQG 89

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           ++D+L      T     +    F P      Q     K    ++++++L+G  + VQ G 
Sbjct: 90  KLDVLQGMAYSTG---RTDNYDFSPPHALVHQSIFARKGTAKVNNLNELAGKELIVQRG- 145

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALY-ALKLTNDRPS 212
                + D+F   ++K   I+ +          + + + A   ++  LY   +L      
Sbjct: 146 ---GVMHDFFLHSDIKAKLILVDTHAAALRLLSSGKYNYALVANLPGLYLGKELELSN-- 200

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWY 238
             + +           A+++G+T+  
Sbjct: 201 -IIPVGRPFGAKQYGYAVMKGNTDLL 225


>gi|120402849|ref|YP_952678.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119955667|gb|ABM12672.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 238

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 70/216 (32%), Gaps = 9/216 (4%)

Query: 41  NTGLVG-FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           +      F+        +G++      L + +      I+++ +   +   A+Q    D 
Sbjct: 14  DAEAPPLFSLWTPENGRQGYEPGVAEVLGAELG---RPIEWVRVPWVDMIPAVQRGDADA 70

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +      T  R+    + F        +G ++ +  GI +   L G  +     +T    
Sbjct: 71  VLCGQGITAERQA--QVDFTRPYAIFHEGVLVRRGSGIHAPEDLVGRKVAAIENSTNMAL 128

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
              +  A  + +     +   ++ AA  A   DA   D      L  T+    ++ +   
Sbjct: 129 AQTFTGAEPIAFGAGSDDVYADMLAALLAGEVDAVVDDDVVFVPLGATHP---DYELAFT 185

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + + +    A+ +   +    +      ++ +  L 
Sbjct: 186 VQTGNRWGIAVAKDRPDTLAEIDGALGRLIESGRLR 221


>gi|146319534|ref|YP_001199246.1| hypothetical protein SSU05_1880 [Streptococcus suis 05ZYH33]
 gi|145690340|gb|ABP90846.1| Unknown protein [Streptococcus suis 05ZYH33]
          Length = 119

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 23/124 (18%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWK- 57
           M +   + +L LI +F  +          ++   +L+ G+      F       +     
Sbjct: 1   MKRKLSIFLLTLIAVFSVTTG--------VRADEYLRVGMEAAYAPFNWTQEDDSNSAVP 52

Query: 58  ---------GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
                    G+DV   + +++++  +   ++      +    AL S +ID++      T 
Sbjct: 53  IEGTNQFANGYDVQVAKKIAASMDKELLVVK---TKWEGLVPALTSGKIDMIIAGMSPTE 109

Query: 109 LREI 112
            R+ 
Sbjct: 110 ERKK 113


>gi|88704781|ref|ZP_01102494.1| bacterial extracellular solute-binding family 3 protein
           [Congregibacter litoralis KT71]
 gi|88701102|gb|EAQ98208.1| bacterial extracellular solute-binding family 3 protein
           [Congregibacter litoralis KT71]
          Length = 743

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 61/219 (27%), Gaps = 9/219 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  I +RG L+ G     + +A     G   GFD++   AL+  +      ++ + L   
Sbjct: 489 LERIAERGTLRVGYLPDSLPWAFRNQQGIETGFDMEMANALARDL---DVSLELVRLREP 545

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLS 144
           +   +L    IDI+      T   +      F         G ++   +    +    LS
Sbjct: 546 DIGTSLARGHIDIVMSGLGRTA--DRLRNYRFAGEPIELTLGLLVPDHERKAFADSEALS 603

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
                       +       K           E          A   DA         A 
Sbjct: 604 ARRALTIGVVQRDPAFQRQIKELLPHATIQSVES-PRAFLRGNAPELDAVLYSAEGGAAW 662

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            L     S  V  P +   +     +  GD  W   V+ 
Sbjct: 663 TLLYPNFSVVVPQPVLARLTG-GYMVPPGDDPWARYVNE 700


>gi|88703682|ref|ZP_01101398.1| Transglycosylase SLT domain protein, secreted [Congregibacter
           litoralis KT71]
 gi|88702396|gb|EAQ99499.1| Transglycosylase SLT domain protein, secreted [Congregibacter
           litoralis KT71]
          Length = 479

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 48/160 (30%), Gaps = 5/160 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +     +        T+   +      I++RG L+                G  +GF+ D
Sbjct: 5   RTRLRFLTLFAAALLTACGQSNDTREAIQERGELRLITRNS--PTTYYLGRGGPRGFEYD 62

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               L+  +  +   +     + +E F AL+  + DI       T  R      +  P  
Sbjct: 63  LAAMLAEELGVE--LLVSQAFSIEEIFAALERGEADIAGAGLTLTDTRSTRFAAS-VPYA 119

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
               Q      +K       L   S+ V   ++ E  L  
Sbjct: 120 TQMPQVIYKVGRKKPRKPEDLKNMSLAVLKDSSHEELLER 159


>gi|182625929|ref|ZP_02953694.1| EAL domain protein [Clostridium perfringens D str. JGS1721]
 gi|177908842|gb|EDT71340.1| EAL domain protein [Clostridium perfringens D str. JGS1721]
          Length = 541

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 9/199 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   F+ I+   ++F        SI+   K++  LK G       F  +    +  G+
Sbjct: 1   MKKSKRFIMIILFFLVFIMLCLCYGSIINKEKRKTLLKIGFYDDYPHF-YINNKANVCGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    L+  +     K++Y+  N  +    L++ +ID++        L        F 
Sbjct: 60  YKDITENLAKKL---NFKVEYVNGNVPDLLKELKNGEIDLIFG---INKLPAREESFKFT 113

Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  D   FI  +K      +  L+G  +    G      + DY K  N+    +    
Sbjct: 114 NKSINDELNFIYTNKNIKYGDLEALNGMKMGYIEGELDNEWILDYLKKRNINVELVNGSS 173

Query: 179 VEEIDAAYRAHRCDAYTGD 197
            + +      ++ D    +
Sbjct: 174 YKAVKTLLIHNKVDFIVDN 192


>gi|146342610|ref|YP_001207658.1| putative periplasmic-binding protein amino-acid periplasmic-binding
           protein [Bradyrhizobium sp. ORS278]
 gi|146195416|emb|CAL79441.1| putative periplasmic-binding protein; putative amino-acid
           periplasmic-binding protein [Bradyrhizobium sp. ORS278]
          Length = 265

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 86/250 (34%), Gaps = 15/250 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVG--FAEVKANGDWKGFDVDFCRALSSAIFDDP 75
           ++ +  A +  +I   G L+  +  G  G  F  VK++    G  V+  +A+++ I    
Sbjct: 21  SNSAAAAGLKEEIAPTGKLRVAVAVGPAGGAFWCVKSDSSVSGVPVELGKAMAAQIG--- 77

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++++         A+           T +    E    ++F P+       FI+    
Sbjct: 78  VPVEFVE---HPNSNAILEGAAQGSWDVTFFPKDAEREAKVSFGPVYDSVDTTFIIRAGM 134

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I +++ L      V A    + T+    KA   K     F+  EE+ A   A   DA T
Sbjct: 135 DIPNIAALDHEGTEVAAI--NDTTVLRGAKAFLKKATVTGFKSYEEVYALLAAGEIDALT 192

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                L  +           +L +   K+  A A+ Q   +    V+           L 
Sbjct: 193 LARDQLNIMAKQIPG---TKVLNETFKKTDTAVAVPQKHPQSLAFVTKFMTEAKANGLLK 249

Query: 256 --ITQKNINQ 263
                 N+++
Sbjct: 250 KAYGANNLSE 259


>gi|260464192|ref|ZP_05812385.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
 gi|259029995|gb|EEW31278.1| extracellular solute-binding protein family 3 [Mesorhizobium
           opportunistum WSM2075]
          Length = 265

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 69/237 (29%), Gaps = 15/237 (6%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPS 76
           T  +  A  L D+  +  +             + A  G   G++ D    ++  +     
Sbjct: 17  TPVAALAQALPDLGGKKVVVV-TENAYPPLQFIDAKTGKQIGWEYDAMDEIAKRL---NF 72

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---- 132
           K++Y   +      A+   Q +     T  T+  +    + F        Q  ++     
Sbjct: 73  KVEYQNTSWDAMIQAVSDNQYN--IGMTGITIKDDRKQKVDFSDPYMRSEQFMLVRGDES 130

Query: 133 KKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
           +     +        I  QAGTT     +      +       +FE       A ++   
Sbjct: 131 RFTDAKTFGAFKDGLIGAQAGTTPFYTAVYSVLDGNEQNPRIKLFETFGATVQALKSGDV 190

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           D    D +A       ++      ++   +          +G ++    V+    A+
Sbjct: 191 DVVLTDGTAGKGYVDASEGK--LKLIGGPLGTEDFGFIFPKG-SDLVKPVNAAIAAL 244


>gi|117925091|ref|YP_865708.1| periplasmic sensor signal transduction histidine kinase
           [Magnetococcus sp. MC-1]
 gi|117608847|gb|ABK44302.1| amino acid-binding domain sensor histidine kinase [Magnetococcus
           sp. MC-1]
          Length = 589

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/276 (10%), Positives = 78/276 (28%), Gaps = 35/276 (12%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGD--------------IKKRGFLKCGINTGLVGFAE 49
                ++   ++ F  F+   + L +              +K +G ++  ++   + +  
Sbjct: 16  IVVTLLVLCFVMLFPPFTVAENKLKEPSFLLELTEQEQAYLKAKGEIRMCVDPDWMPYEM 75

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           +   G   G   D+ + ++  +      +     +  +    +Q+   +IL    + T  
Sbjct: 76  IDEQGRHVGMAADYMKVIAQLLSVPIQLVPTK--SWMDSLSHVQTGNCEIL-SLLNKTPQ 132

Query: 110 REISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
           R     L F           +       ++ +S LSG ++    G      +   +    
Sbjct: 133 RSTF--LDFTTPYMETPIVLVTRNDVTYLNGLSDLSGHTLATTKGYVYTENIKHDYPE-- 188

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDA-----YTGDISALYALKLTNDRPSEHVILPDIISK 223
                +  + V E           A     +    +                I       
Sbjct: 189 --IPLVEVDTVREGLNRVSRGEVFAQVGMLFVLVNTIQEGQISNLK------ISGHTDYM 240

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           S +   + +G+    +++      +   + + I Q 
Sbjct: 241 SRMGIGVRKGEPLLLSVLDKAVKTITPQQHINIRQN 276


>gi|327483610|gb|AEA78017.1| Transglycosylase, Slt family [Vibrio cholerae LMA3894-4]
          Length = 530

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 68/227 (29%), Gaps = 21/227 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 33  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 90

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                             +  + 
Sbjct: 91  S--LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFKQLVE 148

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            ++  +     L+  S+ V         LA   K  + ++H      V ++         
Sbjct: 149 RQQTLLKDNPDLAFFSV-VDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGEL 207

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +T   S   +L        E     ++    P++  I + D E  
Sbjct: 208 -LFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDDESL 251


>gi|229592420|ref|YP_002874539.1| putative transglycosylase [Pseudomonas fluorescens SBW25]
 gi|229364286|emb|CAY52016.1| putative putative transglycosylase [Pseudomonas fluorescens SBW25]
          Length = 486

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 71/240 (29%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            I   + L  ++     S L  IK+ G L+         +     NG+  GF+ +  +  
Sbjct: 15  LIATGLFLMLSACVDKPSTLERIKEDGVLRVVTRNSPATY-FQDRNGE-TGFEYELVKRF 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +           L+     L   +  +   +         +    + F         
Sbjct: 73  ADDLGVKLEIETADNLDDLFGQLGKPNGPVLAAAGLVS---SEQRQAQVRFSHPYLEVTP 129

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             I    +   ++ + L G  I V  G+T    LA   K +  ++Y       V ++   
Sbjct: 130 QIIYRNGQSRPTNAADLVGKKIMVLKGSTHAEQLAALKKQNPAIEYEESDAVEVVDLLRM 189

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + +   ++          L +  ++S         D    N ++   
Sbjct: 190 VDEGQIDLTLVDSNEVAMNQVYFPNVRVAFDLGNASNQS--WAVAAGDDNSLLNEINSYL 247


>gi|229513030|ref|ZP_04402496.1| transglycosylase Slt family [Vibrio cholerae TMA 21]
 gi|229349923|gb|EEO14877.1| transglycosylase Slt family [Vibrio cholerae TMA 21]
          Length = 531

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 68/227 (29%), Gaps = 21/227 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 34  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 91

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                             +  + 
Sbjct: 92  S--LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFKQLVE 149

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            ++  +     L+  S+ V         LA   K  + ++H      V ++         
Sbjct: 150 RQQTLLKDNPDLAFFSV-VDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGEL 208

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +T   S   +L        E     ++    P++  I + D E  
Sbjct: 209 -LFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDDESL 252


>gi|229530026|ref|ZP_04419416.1| transglycosylase Slt family [Vibrio cholerae 12129(1)]
 gi|229333800|gb|EEN99286.1| transglycosylase Slt family [Vibrio cholerae 12129(1)]
          Length = 531

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 68/227 (29%), Gaps = 21/227 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 34  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 91

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                             +  + 
Sbjct: 92  S--LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFKQLVE 149

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            ++  +     L+  S+ V         LA   K  + ++H      V ++         
Sbjct: 150 RQQTLLKDNPDLAFFSV-VDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGEL 208

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +T   S   +L        E     ++    P++  I + D E  
Sbjct: 209 -LFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDDESL 252


>gi|229593201|ref|YP_002875320.1| hypothetical protein PFLU5831 [Pseudomonas fluorescens SBW25]
 gi|229365067|emb|CAY53257.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 166

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +A ++ D+  RG L+  +      F   + +    GF+V+    L+  +   P    ++
Sbjct: 20  AHAELVDDVFDRGELRIAVEANTPPFNFKQGD-KLTGFEVELGEQLAQEMDVRP---SFI 75

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             +  +    +++ + D+   +   T   E+     F     
Sbjct: 76  TTDDTDLLPGVETGKYDVAINHIAMTA--ELQDRFDFSEPYN 115


>gi|323499759|ref|ZP_08104718.1| membrane-bound lytic transglycosylase F [Vibrio sinaloensis DSM
           21326]
 gi|323315000|gb|EGA68052.1| membrane-bound lytic transglycosylase F [Vibrio sinaloensis DSM
           21326]
          Length = 509

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 13/169 (7%)

Query: 1   MYKDFF-----VSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K +      +S L + +L  +     +   S L  IK+RG L+ G     + +  +  
Sbjct: 1   MKKLYLSQLRALSTLVVSVLLLSGCQIESEPKSELEQIKERGVLRVGTLNNQLSY-YIGP 59

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G   G D +  R  ++ +           +++     AL++ +IDI++     +  R  
Sbjct: 60  DG-PAGLDYELAREFANELGVQLEMKPAYRISSLY--PALRNGEIDIIAAGLSQSPERLK 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161
           +         Y   Q      +    ++ QL      +      E  L 
Sbjct: 117 AFRAG-PAYYYVSQQVVYKKGQWRPRNLEQLLKRQPELVEKNNNEAVLQ 164


>gi|307608834|emb|CBW98226.1| hypothetical protein LPW_00861 [Legionella pneumophila 130b]
          Length = 242

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 81/248 (32%), Gaps = 28/248 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +  F+ ++ +    F                  L  G+      F      G+ + GF
Sbjct: 1   MKRFMFILLIFINFHAFG---------------KALIIGVPDFAPPFVSRSGGGEFYFGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   ++   I     + QY  +N ++ +  L + ++DI+   T             F 
Sbjct: 46  NIDLMNSICKII---EEECQYKGMNIQQLYTNLNTGKVDIMLAPTPIVST--AGTNYIFS 100

Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                     +       I++++ L G  +     T     L ++F+ +      + F +
Sbjct: 101 LPYLPSNAQIVTLKANDHINALTDLKGKKVGTLKYTLYGGLLQEHFQDY---VDLMQFSK 157

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237
           + ++  A      +A   +  A  A    ++  +E   + D I   +      ++ +   
Sbjct: 158 LPDMAIALSNREIEAVVLN--ANAAKYAMSNSATELKFVGDPIPIGNGYGILALKNNAPL 215

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 216 IMKINKAL 223


>gi|119774979|ref|YP_927719.1| extracellular solute-binding protein [Shewanella amazonensis SB2B]
 gi|119767479|gb|ABM00050.1| diguanylate cyclase [Shewanella amazonensis SB2B]
          Length = 932

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 54/182 (29%), Gaps = 15/182 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L+ G          V   G++ G + D  + + + +  +   + +      +   AL 
Sbjct: 495 GTLRMGFLENWGPMEFVDEQGNFAGVNADIAQMMEAMLGIEIQPVPFK--EWSDLISALA 552

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152
              ID L+ +   T  RE  +G  +    +      +   +   + ++ QL G  + V  
Sbjct: 553 KGNID-LAGSVAKTAEREGQMG--YSEPYWPSAWALVSPLESVTVFNLEQLEGQRLAVVE 609

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-----TGDISALYALKLT 207
           G      L     A       ++    +       + + D +     T            
Sbjct: 610 GYQIISRL----MAEYPGIKLVLVPDSQSGLQTVASGKADVFLEKVVTVASQLGAGQYQQ 665

Query: 208 ND 209
             
Sbjct: 666 LK 667



 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 89/262 (33%), Gaps = 29/262 (11%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G       F  +  +G+ +G  V+  +  S     +   + ++    ++    L+ 
Sbjct: 27  VLVMG--EDSYPFQFLDDDGEPQGLLVELWKEWSR---VNRRPVVFVGRVWRDSVAQLED 81

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + D+          RE     A   I+  +   ++  + +G + + +L    I +  G+
Sbjct: 82  GRADVHL-GMAINPEREARFAFANA-ISDVNTYVYLHKQLQGRTKLEELQPFQIGIVQGS 139

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           T E  L+    +         F   + +  A       A+ G    +    L     +E 
Sbjct: 140 TFEQELS----SRQPGLVFRYFPTRDSLLEAAYRGELVAFAGMEGYMRDQALQQKLAAEF 195

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
                     P+   ++  +T+ +  V   + A++   E+     N+   + D      +
Sbjct: 196 ----------PINTRVLVRETKLHPAVRKGNNALIR--EINEGFANV---ADDFIRKLER 240

Query: 275 RFLGIDKSSN---IGEALGLTK 293
           R+LG  +  +   I   LG+  
Sbjct: 241 RWLGYQRQQSGLAIAMQLGVEP 262



 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           ++ G L   +  G+  F ++  +G   G  VD  R  S         I ++P +      
Sbjct: 248 QQSG-LAIAMQLGVEPFVDLGGDGQPHGLYVDIWRLWSEKTG---IPINFIPGDMNGSLE 303

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            ++S + D+      +    +++ GL      Y       ++       +  L G  + V
Sbjct: 304 DVRSGRADVHIG---YPESDDMNTGLYRAWHMYTIKSRLFLY-GDQSHDLDALKGKRLGV 359

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                    L    KA         ++ ++E+  A        +    +      L N  
Sbjct: 360 FPTAPYVAAL----KAALPNTQIRFYQGMDEMLTAVHQGDIVGFVAAAAWTQHYLLLNRS 415

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            SE   +P +   + +   I QGD    N ++     +   E   I QK
Sbjct: 416 WSEFHQVPSLEFDTEIYALIRQGDQGLANRIASGFNMIDWKELADIEQK 464


>gi|312884994|ref|ZP_07744683.1| putative transglycosylase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367326|gb|EFP94889.1| putative transglycosylase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 512

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 86/254 (33%), Gaps = 25/254 (9%)

Query: 1   MY-KDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           MY K   +++   I L      S   S L  IK+RG L+ G     + +  +  NG   G
Sbjct: 7   MYGKWLCLALFGAIFLSGCQIESQPKSELDRIKERGILRVGTLNNQLSY-YIGPNG-PAG 64

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D +  R  ++ +           +++     AL+   IDI++     T   E       
Sbjct: 65  LDYELAREFANQLGVQLEMKPAYRVSSLY--PALRKGDIDIIAAGL--TQSPERVSAFRP 120

Query: 119 RPITYFDGQGFIMHK-----KKGISSVSQLSG--------ASICVQAGTTTELTLADYFK 165
            P  Y+  Q  +  K     +  +  +   +G        A + V +    + TL+D   
Sbjct: 121 GPAYYYVSQQMVYKKGNWRPRSILHYLKNQAGLIEKNQGQAILSVVSDPQFDSTLSDIQN 180

Query: 166 AH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
            +    YH      V ++  +        +T   S   +L        +  I  ++    
Sbjct: 181 KYPEFSYHITQDADVNDLLKSVSQGELR-FTVADSVEVSLSQRIY--PDIAIAFELTEDQ 237

Query: 225 PLAPAIIQGDTEWY 238
           P++  + +   E  
Sbjct: 238 PISWFLRRSQDESL 251


>gi|226324097|ref|ZP_03799615.1| hypothetical protein COPCOM_01875 [Coprococcus comes ATCC 27758]
 gi|225207646|gb|EEG90000.1| hypothetical protein COPCOM_01875 [Coprococcus comes ATCC 27758]
          Length = 287

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 70/263 (26%), Gaps = 17/263 (6%)

Query: 1   MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGD 55
           M K        L   +L     S++ S   D         +K         +  V  +  
Sbjct: 1   MKKLASILAVTLAAGVLATGCGSSSGSASKDSSSDSGKTVIKAATGANAKPYVYVGDDDK 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G+DVD   A+   +     +++Y   +       L S    I   N  +    +    
Sbjct: 61  PAGYDVDVLNAVFDKL--PDYELEYEVTDFGSVLSGLNSGNYQIGVNNFSYNE--DRGAS 116

Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +          F+  K    I S    +G S     G +    +  + + +  K   I
Sbjct: 117 YLYSYPYDKISYVFVTKKGGKEIKSFEDAAGLSFEGGTGISVSNAVEAWNEKNPDKAINI 176

Query: 175 VFERVEEIDAA--YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS----PLA- 227
            +   +             D    D++   +     +   +   +P+  +K       A 
Sbjct: 177 TYSDADTSVFLQHVADGSQDFTIIDLAMYNSYMEEFNYDVQKNDIPEDEAKMIAENSYAY 236

Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250
               Q   +    V      +  
Sbjct: 237 YIFPQDQKDLREQVDKALKELKE 259


>gi|59714167|ref|YP_206942.1| transglycosylase [Vibrio fischeri ES114]
 gi|59482415|gb|AAW88054.1| predicted transglycosylase [Vibrio fischeri ES114]
          Length = 485

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 6/168 (3%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F+ +  +I L  T+  +N + L  IKKRGFL         G       G  +G + +  +
Sbjct: 48  FIFVPEIIYLSSTNNKSNKNTLEKIKKRGFLLVATKLD--GVGCYYKRGQLRGIECELLQ 105

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
             ++ +  D         +    F AL +K++DI++ +      R+      F    +  
Sbjct: 106 EYANYL--DVELNILFFPDLHSLFTALDNKRVDIIASDLTPNNERKK--KFLFSNALFHT 161

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
            +  I  K   IS++ QL+G +I ++ GTT +  +    +  N+    
Sbjct: 162 EEWLIQRKDNAISNLKQLNGKTISIRKGTTYKDVILTLQQEMNINIKI 209


>gi|190895401|ref|YP_001985693.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CIAT 652]
 gi|190699346|gb|ACE93430.1| probable octopine ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 280

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 61/239 (25%), Gaps = 33/239 (13%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +      +    A+G   GF+ +  + L         +   +  +      AL + +
Sbjct: 30  TITLEGAYAPWNLTNADGTLGGFEPELAKVLCERA---KIECTLVASDWDGMIPALNAGK 86

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---------------- 140
            D++      T  R+    + F          F   K   ++                  
Sbjct: 87  FDVIMDALSITEERK--QVIDFTVPYAATPAAFATAKDSPLAKAAGTGATIKMTPGQTGV 144

Query: 141 -------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                      G +I +QA T     + D F           ++   + D   +  R D 
Sbjct: 145 KEIDALKEAFKGKTIGIQAATVYAKFVYDNF---GDIAEIREYKTGADRDLDLQNGRIDL 201

Query: 194 YTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D           +   +     +   I        I + DT+  +  +    + + 
Sbjct: 202 GFDDAVYFANAFQAANGALDFTGPEIVGSIWGEGEGLGIRKADTDLRDKFNVAIKSALA 260


>gi|54297079|ref|YP_123448.1| hypothetical protein lpp1124 [Legionella pneumophila str. Paris]
 gi|53750864|emb|CAH12275.1| hypothetical protein lpp1124 [Legionella pneumophila str. Paris]
          Length = 253

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 75/250 (30%), Gaps = 29/250 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGF 59
           M +  F+ I    +L                    LK G+      F+ +      + GF
Sbjct: 1   MKRIVFILIFISNVLV---------------HSESLKVGVLQFAPPFSSISDKANHYYGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V     + + +     K +Y+P+  +     L      I+  +T  T    +     + 
Sbjct: 46  VVALMNIICNRL---QEKCEYIPIPKEGELKGLDKGVYHIVFSSTPITAS--LPANYRYS 100

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F+  K   I +++ ++   +        +  L    K +      I +   
Sbjct: 101 LPYLPSDGQFLTLKNNSIDTLNDINFKKVGFFKINFQQSPL---LKKYETTNTLIEYTDP 157

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235
            E+  A    + DA   +  A   +      P+E   L  I  K P     A   ++  +
Sbjct: 158 AELVNALTTKKIDAILINYQASRFIVNNL-NPTEDDQLKLIGDKIPIGSGYAIIALKNQS 216

Query: 236 EWYNIVSWTH 245
              + ++   
Sbjct: 217 ALIDKINHIL 226


>gi|238922608|ref|YP_002936121.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, putative [Eubacterium rectale ATCC 33656]
 gi|238874280|gb|ACR73987.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, putative [Eubacterium rectale ATCC 33656]
          Length = 333

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 34/238 (14%)

Query: 1   MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M +    + L L  +   +           + + S   D   +  LK G+      F   
Sbjct: 36  MKRSKRFAALILTGVMAVTTLFGCGSSSGGAASDSSAADSSSKKVLKVGMECAYAPFNWT 95

Query: 51  -KANGDWKG---------------FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
              +    G               +DV   + L+  +  D   ++   +      ++L +
Sbjct: 96  QDTDTTPDGSKAVKIAGSDYYAYGYDVAVAQKLADQMGMD---LEVHKVEWSSIGISLDA 152

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAG 153
              D +      T  RE S           +        K   +  +S L+     V   
Sbjct: 153 GDYDCIIAGMGKTKEREASYAFTEPYYYRNNCIVVKKGGKYSTVKGLSDLADTGCKVTTQ 212

Query: 154 -TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             T  + L D  K      +   FE   E   A      D    D+    +  LTND 
Sbjct: 213 LGTGWIPLLDQIKGAEQSGN---FETTSECFLAISNGSADVCVIDVPTAESAALTNDD 267


>gi|186473941|ref|YP_001861283.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184196273|gb|ACC74237.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 309

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 25/237 (10%)

Query: 34  GFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             L   IN    G+  +  +    + GFD+D    + + +      + Y P+        
Sbjct: 65  KSLVNAINPHTPGYEALDPSDPSKYIGFDIDLGETIGNCLG---FTMTYKPVTFAALLTT 121

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQS Q DI+  +   T  R       F         G ++ K                  
Sbjct: 122 LQSGQADIVISDIYATEERAK--AADFI-TYSKVFDGVLVAKGNPKKITGINPTMCGTTA 178

Query: 152 AGTTTELTL-------ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           A  T  + +            A+  +    +++       A  + R D Y  D++ +   
Sbjct: 179 AENTGYVEVPLIQNLGPACKAANRQEAAIQLYDNNANCIQAILSGRADTYINDVNTVDQA 238

Query: 205 KLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYNIVSWTHYAM----VTAEELG 255
                   E      +    P      + +   E+   V     A+    + AE L 
Sbjct: 239 VKAYPDKLEKASAVTL----PYSVGIGVPKDKPEFRAAVMAALVAIQKTGIEAELLK 291


>gi|326333118|ref|ZP_08199367.1| arginine transporter [Nocardioidaceae bacterium Broad-1]
 gi|325949101|gb|EGD41192.1| arginine transporter [Nocardioidaceae bacterium Broad-1]
          Length = 317

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 73/234 (31%), Gaps = 22/234 (9%)

Query: 28  GDIKKRGFLKCGINTGL----VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
            D++K   L  G         +       +G+  G D+D   AL++ +       +    
Sbjct: 66  ADVQKSKTLILGTTEATGEQGLPHGGSDQSGEQIGLDIDLRNALAAKLG---VTWKTEFG 122

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGISSV 140
           + +      QS + D+   N   T  R   +          DGQ F+  +      + ++
Sbjct: 123 SFETIVPGTQSGKYDVGQANFAVTSERLEVVDY---ATYLLDGQSFVSREDGDLDQVKTL 179

Query: 141 SQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           + + G ++    G++ +  L D      KA    Y    F+    I    +  + D Y G
Sbjct: 180 TDICGHTVATSPGSSFQQILEDGAAECEKAGKKAYEVDYFKDNAAILLGLQNGKTDLYFG 239

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              +L  L            L            + +       +V     A++ 
Sbjct: 240 PTLSLKYLVSHQPGLKYLGELSLTDV----GFVVAKKSPLAPVLV-DAINALIA 288


>gi|159899701|ref|YP_001545948.1| extracellular solute-binding protein [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159892740|gb|ABX05820.1| extracellular solute-binding protein family 3 [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 256

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 15/191 (7%)

Query: 1   MYKDF-FVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M + F  ++I  L+   + +       +  +    K RG L  G + G + FA+++    
Sbjct: 1   MRRLFDILAICVLLGYAWLATRSQGGADDPVWQRAKARGVLVVGTDFGFLPFAQLEGQ-Q 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL---QSKQIDILSRNTDWTLLREI 112
             G+DV+    ++  +      +++  +     F A+      Q+D+++           
Sbjct: 60  PIGYDVELVEEIARRL---DLTVEWRQIGYDGLFPAIDPANPNQVDLIAAG--IIQNPAE 114

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                +       GQ  ++     I+  +QL G SI VQ G+  E      F    +   
Sbjct: 115 GWRARYSQAYLDGGQQLLVSSSNPITKQNQLIG-SISVQLGSPGESIARQIFSPQQIDNS 173

Query: 173 PIVFERVEEID 183
           P +     ++ 
Sbjct: 174 PYIEIAAADLV 184


>gi|154148204|ref|YP_001407241.1| CjaC [Campylobacter hominis ATCC BAA-381]
 gi|153804213|gb|ABS51220.1| CjaC [Campylobacter hominis ATCC BAA-381]
          Length = 257

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 57/199 (28%), Gaps = 27/199 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   V +L    L F+                 LK   +     F+ +  +G + G D
Sbjct: 1   MKK-ILVMLLVFCGLSFSQ---------------TLKFVTSPDDPPFSYM-KDGKYTGVD 43

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++    ++     D      +  + +     L     D    +   T  R       F  
Sbjct: 44  MEILDNVAKRAGFDYE---IVQTSFERIGDELDLG-ADFAISSIAKTAERSA--KFDFSD 97

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y   Q F+  +     S   L G  I V    + +  LA            IV   + 
Sbjct: 98  KYYEATQLFVAEQGNDFISKDSLIGKKIGVINSKSVQERLAQSIP----DAEVIVAGSLV 153

Query: 181 EIDAAYRAHRCDAYTGDIS 199
            +    +  + DA   + +
Sbjct: 154 NLIVVAKTGKVDAIIVEST 172


>gi|110598078|ref|ZP_01386357.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM
           13031]
 gi|110340337|gb|EAT58831.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM
           13031]
          Length = 476

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 16/220 (7%)

Query: 35  FLKCGINT-GLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            L+ G +  G   +          + GFD +F  AL+  +        ++P + +    +
Sbjct: 11  VLRWGGDPSGGAPYVYADPANPQTYTGFDYEFAEALAREMHLKAE---FVPTDWESIVAS 67

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICV 150
           LQ K+ D++    + T  R     + F    Y       +      I+S+         V
Sbjct: 68  LQRKEFDVIIDGFEPTEDRAR--EVLFSKPYYLFRLQLTVKRTDNLITSLEDCRKHQKTV 125

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  +  A         Y    ++            R DA   D++        N +
Sbjct: 126 GTL----VNCAASRLLDQGGYKSKAYQDPVGAYQDLELGRVDAVLMDVAGEMFYARQNPK 181

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
                 +            I + DT     V+     +V 
Sbjct: 182 ---LKAVGKPFQTGAYIVGIRKADTLLLGRVNAAIDTLVN 218


>gi|118472075|ref|YP_890900.1| glutamine-binding periplasmic protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118173362|gb|ABK74258.1| putative glutamine-binding periplasmic protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 239

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 71/216 (32%), Gaps = 9/216 (4%)

Query: 41  NTGLVG-FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           +      F+         G++     AL + +      ++++ +   +   A+Q    D 
Sbjct: 16  DAEAPPLFSLWTPENGRTGYEPGVAEALGAELG---RPVEWVRVPWVDMIPAVQRGDADA 72

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           +      T  R+    + F        +G ++ +  GI S   L G  +     +T    
Sbjct: 73  VLCGQGITPERQA--QVDFTRPYAIFHEGVLIRRGTGIKSPEDLVGRKVAAIENSTNMKL 130

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
              +  A  + +     +   ++ AA  A   DA   D      L  T+    ++ +   
Sbjct: 131 AETFTGAIPVPFGAGSDDVYADMLAALLAEEVDAVVDDDVVFVPLGATHP---DYELAFT 187

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + + +    A+ +   +    +      ++++  L 
Sbjct: 188 VKTANKWGIAVSKDRPDTLAEIDGALERLISSGRLR 223


>gi|26989395|ref|NP_744820.1| periplasmic binding protein, putative [Pseudomonas putida KT2440]
 gi|24984257|gb|AAN68284.1|AE016462_10 periplasmic binding protein, putative [Pseudomonas putida KT2440]
          Length = 308

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 41/277 (14%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             +  +L  ++L+  +          I   G LK  +      ++    +G  +G DV+ 
Sbjct: 19  RLWAVLLSGLLLWCAAAQAQVRNYDAIIAAGELKVAVYKDFAPYSFQD-HGQPRGVDVEL 77

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN------------TDWTLLR- 110
            +AL++A+      I             L     D + R                   R 
Sbjct: 78  AQALATALGVRLQLI------WAPPGEKLDDDLRDYIWRGSPLRHQQLADLMMRVPYDRA 131

Query: 111 -----------EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTEL 158
                      E +  + F P      Q     ++   ++SV+      I V+  +    
Sbjct: 132 YAQRRNELGELENAQVVMFGPYQQERWQVAYDRRRLASVASVAVFQQHPIGVEVDSVPSF 191

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS------ 212
            L   F    +      +  V++  AA +A + DA       +         P       
Sbjct: 192 YLTSVFN-GMLSARTHHYPGVQQAFAAMQAGQVDAVMAMRGEVDWQLHQAADPQLALAEN 250

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +  L     +  +  A+ + + +    V     AM+
Sbjct: 251 AYPNLGKQAWE--IGMAVHESNRQLAYAVEEAMEAMI 285


>gi|54294064|ref|YP_126479.1| hypothetical protein lpl1128 [Legionella pneumophila str. Lens]
 gi|53753896|emb|CAH15367.1| hypothetical protein lpl1128 [Legionella pneumophila str. Lens]
          Length = 253

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 79/250 (31%), Gaps = 29/250 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGF 59
           M +  F+      +LF ++F  ++           LK GI      F+ +      + GF
Sbjct: 1   MKRIVFI------LLFISNFLVHSES---------LKVGILQFAPPFSSISDKANHYYGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V     + + +     K +Y+P+  +     L      I+  +T  T    +     + 
Sbjct: 46  VVALMNIICNRL---QEKCEYIPIPKEGELKGLDKGVYHIVFSSTPITTS--LPANYRYS 100

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F+  K   I +++ ++   +        +  L    K +      I +   
Sbjct: 101 LPYLPSDGQFLTLKNNSIDTLNDINFKKVGFFKINFQQSPL---LKKYETTNTLIEYTDP 157

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235
            E+  A    + DA   +  A   +      P+E   L  I  K P         ++  +
Sbjct: 158 AELVNALTTKKIDAILINYQASRFIVNNL-NPTEDNQLKLIGDKIPIGSGYGIIALKNQS 216

Query: 236 EWYNIVSWTH 245
              + ++   
Sbjct: 217 ALIDKINHIL 226


>gi|107026285|ref|YP_623796.1| twin-arginine translocation pathway signal [Burkholderia
           cenocepacia AU 1054]
 gi|116692526|ref|YP_838059.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|105895659|gb|ABF78823.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650526|gb|ABK11166.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 310

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +     +       L
Sbjct: 61  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLVLLPIAWADWPL---GL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I        ++G  I 
Sbjct: 118 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTASPIVKIAEPKDIAGLRII 174

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ K +  +       + F+       A  + R DA     ++L    
Sbjct: 175 TGAGTSQERILLEWSKRNVAQGLKPAELLYFDDDATARVALLSGRADAELNPNASLAYEA 234

Query: 206 LTNDR 210
             + +
Sbjct: 235 ARSGK 239


>gi|261339906|ref|ZP_05967764.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288317817|gb|EFC56755.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 295

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 86/299 (28%), Gaps = 35/299 (11%)

Query: 1   MYKDFFVSILCLIILFFT----------SFSTNASILGDIKKR------GFLKCGINT-G 43
           M     + ++  +    +            + +   +  I         G L   I+   
Sbjct: 1   MKYGLLLGLIFTMAADASIDLNANQQPLPVAVDPQAVAKIPATYSFVEPGTLTVAISALN 60

Query: 44  LVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
               A + ++     G D D  R L+ ++     K++ +P   ++  L + S + D+   
Sbjct: 61  SPPLALLASDNRTRIGSDPDIARLLAGSLG---LKLKLVPTAWEDWPLGIVSGRYDVALV 117

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS---QLSGASICVQAGTTTELT 159
           N   T  R+      F      D   F +     I S++    LSG  + V +GT  E  
Sbjct: 118 NIAVTEQRKE--KFDFA-TYRVDSLAFSVKSTSSIQSITGAGDLSGKKVIVGSGTNQERI 174

Query: 160 LADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           L  +   +         P+        +   ++ R D + G  S          +     
Sbjct: 175 LLGWNDENRRAGRAPALPLYLTDDASANLYIQSGRADVFFGPQSVSAYKAALTGK----T 230

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            +  +  K        +        +       +T  E         +  +   +  V 
Sbjct: 231 RVVGLGPKKAYVATTTKKGNGLVYALQAALDGAITRGEYQKVLARWGEEGEAVDHSQVN 289


>gi|159045202|ref|YP_001533996.1| hypothetical protein Dshi_2662 [Dinoroseobacter shibae DFL 12]
 gi|157912962|gb|ABV94395.1| hypothetical protein Dshi_2662 [Dinoroseobacter shibae DFL 12]
          Length = 300

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 40/232 (17%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI---------------------LGDIKKRGFLKCG 39
           M +        ++     S   +A                       L  I++RGF+   
Sbjct: 1   MVRISVWIAAAIMSTITLSAPAHADRCADWVPQPKPQNVGRDIVGQDLDTIQERGFVTIA 60

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA-LQSKQI- 97
           +      ++  + N   +G D++  + ++  I  +P   ++  + A E   A L++    
Sbjct: 61  VYEDFPPYSWKEGN-TPRGIDIEIGKLIAEDIGVEP---RFNFVAAGETLDADLRNNVWR 116

Query: 98  -DILSRNTDWTLLR--------EISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSG 145
             I+       ++R             + F    Y +       K          +    
Sbjct: 117 GPIIGGAVSNIMMRVPYDSAFTCRVEQVVFTGQYYKESIAIAYDKASYPEEKPVPAYFRF 176

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            ++ V+  +  +  L+       +  +   F  +EE  AA  A    A  G 
Sbjct: 177 DTVAVENDSIADFYLSSMAG-GQLLNNIRRFTTMEEAMAALDAGEVKAAMGP 227


>gi|320010633|gb|ADW05483.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Streptomyces flavogriseus ATCC 33331]
          Length = 300

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 13/245 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +L          +     L  ++K+GF++         +  ++   + KG      R +
Sbjct: 27  GVLSACSKTDAGAADGEGALDRLRKQGFVRVAY-ANEAPYGYMEGK-ELKGEAPTLHREI 84

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
             A+  D  K              LQ+ + D++S     T  R       F    +    
Sbjct: 85  FKALGVDELKPTLS--EWDGLIPGLQAGKYDVVSAGMAITPER--CANALFSEPEFISPT 140

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAA 185
             ++ K      V+ L+ A             +   +       +      ++ ++   A
Sbjct: 141 ALMVRKGNP-KKVTDLASAKAAGIIVGVMSGAVEASYAKGAGIAEGKIKTLQKPQDGADA 199

Query: 186 YRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKS---PLAPAIIQGDTEWYNIV 241
            +  R DA+    IS  +  K   D       +P++  K    P      QG+ +  +  
Sbjct: 200 VKGGRIDAFLLTGISLRWLAKTNPDTEVTEAFVPELDGKQQFSPGGAVFRQGNEDLRDSF 259

Query: 242 SWTHY 246
           +    
Sbjct: 260 NRELK 264


>gi|317053023|ref|YP_004119377.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
 gi|316953350|gb|ADU72821.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 294

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 77/292 (26%), Gaps = 29/292 (9%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGD-----------IKKRGFLKCGINTGLV 45
           M     +   ++       F  + S     +             IK  G L+  +     
Sbjct: 1   MKVFSFRLLCLAATMATGAFSITTSYAQMTVAKVDAVAALVPPAIKDAGVLRIAVPDIGK 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
             A     G  KG DV+   A++  +           +        LQ+ + DI      
Sbjct: 61  PLAYK-EGGSLKGMDVELANAVAQTMGLKAE---ISLIPFSAALTGLQANKFDISYGEFY 116

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYF 164
            T  R  +    F           +          ++ + G  +   AG+    TL    
Sbjct: 117 VTAERLKT--ADFVSNWQDYSTYLVKKTSGFSPKVLADICGHKMGAMAGSAELATLKTAA 174

Query: 165 KAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                       F  +     A  + R D    +        +  D+  +       I  
Sbjct: 175 DKCGSNAATISAFPSINNAVLALNSGRVDGVLINR-GGAQESIRLDQGLD---ASGAIGG 230

Query: 224 SPLAPAIIQGDT--EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
            P A A+ + D   +    +   +  ++T+ +      N +         +V
Sbjct: 231 GPTATAVARNDNSAQLLEALKGAYEHLITSGDYAKILNNNDTAYGAVKTIEV 282


>gi|111021334|ref|YP_704306.1| ABC amino acid transporter, extracellular solute binding component
           [Rhodococcus jostii RHA1]
 gi|110820864|gb|ABG96148.1| ABC amino acid transporter, extracellular solute binding component
           [Rhodococcus jostii RHA1]
          Length = 294

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 9/210 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             V+   L     T  ++  S+L  ++  G +  G   G   ++  + +G   G  V   
Sbjct: 17  MMVAAGSLAGCTKTDTTSGGSLLQQLQDSGTVTVG-FAGEAPYSFEQ-DGQLTGATVALH 74

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           R +   +  D   ++ +  +       LQ+++ D++S        R      AF    + 
Sbjct: 75  REIFKNLGID--NVEGVSTDFGALIPGLQARRFDVVSAGMSILPQR--CEQAAFSEPEFN 130

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                ++ K          S     V+    T    +DY +   +    +     ++   
Sbjct: 131 YTTALMVPKGNPAKLTDMQSVQQSGVRMAAMTGAIESDYAQQLGIDA--MQVASPQDGMD 188

Query: 185 AYRAHRCDAYT-GDISALYALKLTNDRPSE 213
           A    R D +    IS  +  +     P E
Sbjct: 189 AVANGRADVFALTGISLNWLAQNNPQAPVE 218


>gi|327191405|gb|EGE58430.1| octopine ABC transporter, substrate-binding protein [Rhizobium etli
           CNPAF512]
          Length = 280

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 61/239 (25%), Gaps = 33/239 (13%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +      +    A+G   GF+ +  + L         +   +  +      AL + +
Sbjct: 30  TITLEGAYAPWNLTNADGTLGGFEPELAKVLCERA---KIECTLVASDWDGMIPALNAGK 86

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---------------- 140
            D++      T  R+    + F          F   K   ++                  
Sbjct: 87  FDVIMDALSITEERK--QVIDFTVPYAATPAAFATAKDSPLAKAAGTGATIKMTPGQTGV 144

Query: 141 -------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                      G +I +QA T     + D F           ++   + D   +  R D 
Sbjct: 145 KEIDALKEAFKGKTIGIQAATVYAKFVYDNF---GDIAEIREYKTGADRDLDLQNGRIDL 201

Query: 194 YTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D           +   +     +   I        I + DT+  +  +    + + 
Sbjct: 202 GFDDAVYFANAFQAANGALDFTGPEIVGSIWGEGEGLGIRKADTDLRDKFNVAIKSALA 260


>gi|46562273|ref|YP_009190.1| solute-binding family 1 protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46447810|gb|AAS94476.1| bacterial extracellular solute-binding protein, family 3
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311235535|gb|ADP88388.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris RCH1]
          Length = 245

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 23/196 (11%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             FV +L  I+   ++             R  +K G +     +     +G   G ++D 
Sbjct: 2   RTFVCLLLAIVFSSSAAVA----------RPVIKYGYDEDYPPWE-KNVSGKPVGINIDI 50

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             AL+  +  +   + Y P   K   + L+S +ID+ +     +  RE        P   
Sbjct: 51  MNALADRLGFE---VVYRPYPFKRVLVLLESGEIDM-TGGLARSAEREAYARYL-EPSYQ 105

Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
              + FI+ ++ GI   + + L    I V+AG      L + F +       +    V++
Sbjct: 106 KTIRVFIIRRESGIRLRTYADLIPLRIGVRAG----NRLYEPFDSDPRLMK-VEAHSVDQ 160

Query: 182 IDAAYRAHRCDAYTGD 197
           +     A R D   G 
Sbjct: 161 LFQMLLAGRTDVIVGG 176


>gi|107103279|ref|ZP_01367197.1| hypothetical protein PaerPA_01004348 [Pseudomonas aeruginosa PACS2]
 gi|296387727|ref|ZP_06877202.1| putative transglycosylase [Pseudomonas aeruginosa PAb1]
 gi|215275776|sp|Q9HXN1|MLTF_PSEAE RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
          Length = 490

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 11/237 (4%)

Query: 6   FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           ++    + +L        A   L  ++K G L+         +     NG+  GF+ +  
Sbjct: 14  WLLATGIFLLLAGCSEAKAPTALERVQKEGVLRVITRNSPATY-FQDRNGE-TGFEYELA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +  +  +  +   ++    +  +   A  S++          T  RE    + +      
Sbjct: 72  KRFAERLGVE---LKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLD 128

Query: 125 DGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI 182
                I    +   +    L G  I V  G++    LA+  K +  +KY       V ++
Sbjct: 129 VTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDL 188

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    D    D + L   ++            +      LA A+  GD +   
Sbjct: 189 LRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARG---LAWALPGGDDDSLM 242


>gi|222082421|ref|YP_002541786.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727100|gb|ACM30189.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 314

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 66/239 (27%), Gaps = 38/239 (15%)

Query: 4   DFFVSILCLIILFFTSFSTNA------SILGDIKKR------------------GFLKCG 39
                ++ + +   +S                I+                    G     
Sbjct: 9   SLVAGVIAVAVFGLSSAYAAEKFNLSPDTSNRIRAEKDEAAIKAIAPDFKFVNPGKFTVA 68

Query: 40  INTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98
           IN      A          G D +  + L+ ++     ++  + +  ++  L + S + D
Sbjct: 69  INPWDPPVATYATDAKTVVGTDPEIAQLLADSLG---LQLDLVSVAWEDWPLGVSSGKYD 125

Query: 99  ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH---KKKGISSVSQLSGASICVQAGTT 155
            +  N   T  R+      F      D  GF +    K   I     ++G  +   AGT 
Sbjct: 126 AVVSNVTVTEERK--QKFDFS-TYRKDVLGFYVKADSKITAIKEPKDVAGLKVITGAGTN 182

Query: 156 TELTLADYFKAHN----MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
            E  + ++ + +            ++     D A ++ R D      + L         
Sbjct: 183 QEKIILEWDRENVAAGLKPVEVQYYDDRAAADLAIQSGRADVEFNPNATLAYSASIKGN 241


>gi|330984833|gb|EGH82936.1| FliY [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 277

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 64/217 (29%), Gaps = 14/217 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +     + L     + ++S     ++ G +  G +     +  +       GFD
Sbjct: 1   MKLSALIVRPVALALLGAVVAMSSSAASAFQQPGKIIAGSDMTFFPYEYMD-KNRPAGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++F   L+  +      I             LQ  + DI + +   T  R   + +    
Sbjct: 60  IEFLDGLAKVMGLKAENID---TRFPNLIGGLQGGRFDITNSSMYITADRLKVIDMI--- 113

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPI 174
                G+  +  K       +     G  I   A T+    L     DY   + ++   I
Sbjct: 114 PYLKSGEAILSVKGSAYQPKTPEDFCGHKIGSMAATSWLQQLQKLSTDYCVKNGLQPIAI 173

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             +    +   A  AH  +A   D +    +      
Sbjct: 174 SEYGTDPQTTQAMLAHAVEAQITDAAVARGVVEKLGN 210


>gi|254254091|ref|ZP_04947408.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
 gi|124898736|gb|EAY70579.1| ABC-type amino acid transport/signal transduction systems
           periplasmic component [Burkholderia dolosa AUO158]
          Length = 313

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 14/182 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I+      +          G D D+ + ++ A+      +     +       L S 
Sbjct: 67  TVAISPHAPPISTYATDARTVVGADPDYAQLVADALGRTLVLVPIAWADWPL---GLSSG 123

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   A
Sbjct: 124 KYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTASPIAKIAEPKDVAGLRIITGA 180

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
           GT+ E  L ++ + +  +       + F+       A  + R DA     ++L      +
Sbjct: 181 GTSQERILLEWNRRNVAQRLKPTELLYFDDDAAARVALLSGRADAELNPNASLAYEAARD 240

Query: 209 DR 210
            +
Sbjct: 241 GK 242


>gi|239941504|ref|ZP_04693441.1| putative amino acid ABC transporter substrate-binding protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239987968|ref|ZP_04708632.1| putative amino acid ABC transporter substrate-binding protein
           [Streptomyces roseosporus NRRL 11379]
 gi|291444948|ref|ZP_06584338.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
 gi|291347895|gb|EFE74799.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
          Length = 300

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 73/245 (29%), Gaps = 13/245 (5%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +L       +  +T    L  ++K+GF++         +  ++     KG      R +
Sbjct: 27  GLLTACSKTDSGSATGEGALEKLRKQGFVRVAY-ANEAPYGYLEGK-QLKGEAPTLHREI 84

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
             A+  D  K              LQ+ + D++S     T  R       F    +    
Sbjct: 85  FQALGVDELKPTLS--EWDGLIPGLQAGKYDVVSAGMAITPER--CGNAIFSEPEFISPT 140

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAA 185
             ++ K      ++ L  A             +   +       +      ++ ++   A
Sbjct: 141 ALMVKKGNP-KKLTDLDSAKEAGVTIGVMSGAVEGSYAKGAGISEGKIKTLQKPQDGADA 199

Query: 186 YRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKS---PLAPAIIQGDTEWYNIV 241
            +  R DA+    IS  +  K   D       +P +  K    P      +G+ +  +  
Sbjct: 200 VKGGRIDAFLLTGISLRWLAKTNPDTEVTEAFVPKLDGKDQFSPGGAVFRKGNEDLRDSF 259

Query: 242 SWTHY 246
           +    
Sbjct: 260 NRELK 264


>gi|326795863|ref|YP_004313683.1| diguanylate cyclase with extracellular sensor [Marinomonas
           mediterranea MMB-1]
 gi|326546627|gb|ADZ91847.1| diguanylate cyclase with extracellular sensor [Marinomonas
           mediterranea MMB-1]
          Length = 734

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 21/220 (9%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFL-------KCGINTGLVGFAEVKA 52
           M K   F  ++  +I+F        + L   ++              +      F+    
Sbjct: 1   MKKYRVFKWLISFLIVFAEGTFAMDTGLALTREESEFLMQNRSFSVYVERNFAPFSFWDG 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
                G+ VDF   ++  +       +    N K      +  +IDI+++    T   + 
Sbjct: 61  V-QLSGYSVDFANLIAQRLGVS-FHYKTEATNWKSAVDKFKEGKIDIIAQ---MTSSSDR 115

Query: 113 SLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                F           ++   K+  ++S+ +L G  + V  G   +  L++++      
Sbjct: 116 KSYALFSQPYMSHYHSIVVPKEKRAELNSLEKLKGKVVGVINGYAVQSELSEHYPEIG-- 173

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
               +FE  +++  A    R DA           +     
Sbjct: 174 --LRLFEDNKQLVEAVMLGRVDASIATH--QVVQRSITSN 209


>gi|319780743|ref|YP_004140219.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317166631|gb|ADV10169.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 265

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 67/234 (28%), Gaps = 15/234 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A  L D+  +  +             + A  G   G++ D    ++  +      ++
Sbjct: 20  AAFAQALPDLGGKKVVVV-TENAYPPLQFIDAKTGKQIGWEYDAMNEIAKRL---NFAVE 75

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKK 135
           Y   +      A+   Q +     T  T+  +    + F        Q  ++     +  
Sbjct: 76  YQNTSWDAMIQAVSDNQYN--IGMTGITIKDDRKEKVDFSDPYMRSEQFMLVRGDESRFT 133

Query: 136 GISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
              +        I  QAGTT     +      +       +FE       A ++   D  
Sbjct: 134 DAKTFGAFKDGLIGAQAGTTPFYTAVYSVLDGNEQNPRIKLFETFGATVQALKSGDVDVV 193

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             D +A       ++      ++   +          +G ++    V+    A+
Sbjct: 194 LTDGTAGKGYVDASEGK--LKLIGGPLGTEDFGFIFPKG-SDLVKPVNAAIAAL 244


>gi|302344526|ref|YP_003809055.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
 gi|301641139|gb|ADK86461.1| extracellular solute-binding protein family 3 [Desulfarculus
           baarsii DSM 2075]
          Length = 480

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 67/235 (28%), Gaps = 17/235 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-------RALSSAIFDDPSK 77
             L  +++RGF++ G+      F      G   G++                A    P  
Sbjct: 43  DDLPAMEQRGFIRFGVAYSPTYFFFQ--KGRPTGYEYSLAEKYRLRLNERRRAQGQPPVD 100

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           + ++P+       AL   ++D+++     T  R          +   +       K  G+
Sbjct: 101 LLFVPMTRDRLIPALLEGRVDVIAAGLTITDKRAAQADFTAPYLDGVEEWIVSGKKVGGL 160

Query: 138 SSVSQLSGASICVQAGTTTELT---LADYFKAHNMKYHPI----VFERVEEIDAAYRAHR 190
            S+  L+G  +CV+  ++       L     A  +    I         E+I     A  
Sbjct: 161 KSLDDLAGREVCVRRSSSYFDNLLRLNQSLAARGLPPIKIVPAEETLATEDILEMVSAGI 220

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                 D              + H  L  +     LA  +   +      +    
Sbjct: 221 VPITVADSHMAELWAQALPGLALHRKLA-LAKGDRLAWMVRPSNPLLKASLDEFL 274


>gi|270158534|ref|ZP_06187191.1| bacterial extracellular solute-binding family 3 protein [Legionella
           longbeachae D-4968]
 gi|289166634|ref|YP_003456772.1| amino acid binding protein [Legionella longbeachae NSW150]
 gi|269990559|gb|EEZ96813.1| bacterial extracellular solute-binding family 3 protein [Legionella
           longbeachae D-4968]
 gi|288859807|emb|CBJ13788.1| putative amino acid binding protein [Legionella longbeachae NSW150]
          Length = 241

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 25/246 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  +    L  +S    ++          +K GI   +  F+ V  +  + GF 
Sbjct: 1   MK---LIKYIICFALLMSSIFAYSNT---------VKVGIVKFVPPFSSVDTSNHYFGFC 48

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +   I    +  +Y  ++       L+   +DI   +T       +     F  
Sbjct: 49  IDLINEVCKRI---NTTCEYKAIDPDSMLDELEKGTVDISISSTPI--SNHLPPEFIFSI 103

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   FI +    I  +S L    I     +     L    K +    +   ++R+ 
Sbjct: 104 PYLTSHGQFITNNP-NIKKLSDLQDKKIGTLKDS----DLHRILKLYTSDENIKEYDRIN 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYN 239
           ++   +  H  DA   ++  L    LTN+       I   I   +      +  + E  N
Sbjct: 159 DLMEGFTDHSVDALLLNVDIL--KYLTNNNLINGWTISKSINLGNGYGILTLNKNAELMN 216

Query: 240 IVSWTH 245
            ++   
Sbjct: 217 KINKAI 222


>gi|148358703|ref|YP_001249910.1| arginine binding periplasmic protein Peb1 [Legionella pneumophila
           str. Corby]
 gi|296106750|ref|YP_003618450.1| arginine transport system substrate-binding protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148280476|gb|ABQ54564.1| Peb1 (arginine binding periplasmic protein) [Legionella pneumophila
           str. Corby]
 gi|295648651|gb|ADG24498.1| arginine transport system substrate-binding protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 253

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 75/250 (30%), Gaps = 29/250 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGF 59
           M +  F+ +    +L                    LK G+      F+ +      + GF
Sbjct: 1   MKRIVFILLFISNVLV---------------HSESLKVGVLQFAPPFSSISDKANHYYGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            V     + + +     K +Y+P+  +     L      I+  +T  T    +     + 
Sbjct: 46  VVALMNIICNRL---QEKCEYIPIPKEGELKGLDKGVYHIVFSSTPITAS--LPANYRYS 100

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                    F+  K   I +++ ++   +        +  L    K +      I +   
Sbjct: 101 LPYLPSDGQFLTLKNNSIDALNDINFKKVGFFKINFQQSPL---LKKYETTNTLIEYTDP 157

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235
            E+  A    + DA   +  A   +      P+E   L  I  K P     A   ++  +
Sbjct: 158 AELVNALTTKKIDAILINYQASRFIVNNL-NPTEDDQLKLIGDKIPIGSGYAIIALKNQS 216

Query: 236 EWYNIVSWTH 245
              + ++   
Sbjct: 217 ALIDKINHIL 226


>gi|170738224|ref|YP_001779484.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|169820412|gb|ACA94994.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 310

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 56/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +     +       L
Sbjct: 61  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLVLLPIAWADWPL---GL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I        ++G  I 
Sbjct: 118 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTASPIVKIAEPKDIAGLRII 174

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ K +  +       + F+       A  + R DA     ++L    
Sbjct: 175 TGAGTSQERILLEWSKRNVAQGLKPAELLYFDDDATARIALLSGRADAELNPNASLAYEA 234

Query: 206 LTNDR 210
               +
Sbjct: 235 ARTGK 239


>gi|186473891|ref|YP_001861233.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184196223|gb|ACC74187.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 289

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 68/242 (28%), Gaps = 35/242 (14%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   +   +  G   +      G   GF+ +    L   I     +   +  +      
Sbjct: 33  KEWKSVTIALEGGYAPWNLTLPGGKLGGFEPELVANLCQRI---KLQCNLVAQDWDGMIP 89

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--------- 141
            LQ+ + D+L      T  RE  +  +               K    ++ +         
Sbjct: 90  GLQAGKFDVLMDAISITPEREKIIAFSRPYAATPATFAVSDTKILPKATPNTPVVKLTGD 149

Query: 142 -------------QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
                        QL G +I +Q+GT     + D FK         V++   E D     
Sbjct: 150 MKTDQPTVDALRKQLKGKTIGIQSGTVYTKFINDGFK---DISTIRVYKTSPERDLDLAN 206

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243
            R DA   D++   A     +     +  P I    P+       A  + D +       
Sbjct: 207 GRIDASFDDVTYYAANADKKEGAQISMAGPKIGG--PIWGPGEGLAFRKQDADLKAKFDT 264

Query: 244 TH 245
             
Sbjct: 265 AI 266


>gi|189425062|ref|YP_001952239.1| multi-sensor signal transduction histidine kinase [Geobacter
           lovleyi SZ]
 gi|189421321|gb|ACD95719.1| multi-sensor signal transduction histidine kinase [Geobacter
           lovleyi SZ]
          Length = 1109

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 28/254 (11%)

Query: 6   FVSILCLIILFFTSFSTNASILGD-------------IKKRGFLKCGINTGLVGFAEVKA 52
           F  +L +++L   +       +               I     +K GI+           
Sbjct: 27  FCIVLIMLMLLGAAPVNGNQTVNTNPTIELTPAEKGWITAHKHIKVGIDPSFPPLKFSD- 85

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           NG  KG ++D+ + LS  I      +             ++S ++D+         + E 
Sbjct: 86  NGTIKGLELDYLKLLSERIGLQFEPVV---AGFTVLDEMVKSGEVDMFISF----NIPER 138

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              + F        Q  I  +     S +S L G  +    G      L   +       
Sbjct: 139 LAYMQFTDPLIEFKQIIISRQDAPFLSGLSSLKGKKVATVRGVKLYDKLLRPYPE----I 194

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
             + F  ++++  A   H+ D        LYA  + N+ P   V     +   P   A+ 
Sbjct: 195 QVVQFSSMDQMFRAVSEHKADVLISRT--LYAGHIINNYPDLKVAGVIDLPAEPYRYAVR 252

Query: 232 QGDTEWYNIVSWTH 245
           +   E   I++   
Sbjct: 253 KEYPELVTILNKAI 266


>gi|323140745|ref|ZP_08075664.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414763|gb|EFY05563.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 74

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 1/73 (1%)

Query: 1  MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGF 59
          M K  F+ +  L +L      ++            L+   +     F   +K    + GF
Sbjct: 1  MKKMLFILVSMLCLLLSAGCGSDKQAAQAPAADKVLRVATSPASPPFELYLKEQNKFTGF 60

Query: 60 DVDFCRALSSAIF 72
          D+D    ++    
Sbjct: 61 DIDLINDVAKKNG 73


>gi|313890659|ref|ZP_07824286.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120970|gb|EFR44082.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 276

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 59/205 (28%), Gaps = 14/205 (6%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     +S+L ++ L FT+      +L   K+   +    +     F          G
Sbjct: 1   MAKKNNPLISLLFIVSLVFTTLGLTTEVLAKDKE--VITVATDAATKPFTYKDGK-TLTG 57

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D+   +A+          +++  +        + + +  I + +  ++  R       F
Sbjct: 58  YDIQVLKAIFK--NSKRYDLKFETVAFPSILSGIDAGRYQIAANDYGYSAERAE--KYLF 113

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE- 177
                           K    ++ LSG      +G      L  + K H  K    +   
Sbjct: 114 SKAISKSNYALATKGDKSYKELADLSGKKTQGMSGANYMQVLEKWNKKHPKKEPIDITYA 173

Query: 178 ----RVEEIDAAYRAHRCDAYTGDI 198
                  +      + + D    D 
Sbjct: 174 SGSTPFTQRLQMLESGQLDFLFYDA 198


>gi|110801198|ref|YP_695510.1| EAL domain-containing protein [Clostridium perfringens ATCC 13124]
 gi|168211777|ref|ZP_02637402.1| EAL domain protein [Clostridium perfringens B str. ATCC 3626]
 gi|110675845|gb|ABG84832.1| EAL domain protein [Clostridium perfringens ATCC 13124]
 gi|170710263|gb|EDT22445.1| EAL domain protein [Clostridium perfringens B str. ATCC 3626]
          Length = 541

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 9/199 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   F+ I+   ++F        SI+   K++  LK G       F  +    +  G+
Sbjct: 1   MKKSKRFIMIILFFLVFIMLCLCYGSIINKEKRKTLLKIGFYDDYPHF-YINNKANVCGY 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
             D    L+  +     K++Y+  N  +    L++ +ID++        L        F 
Sbjct: 60  YKDITENLAKKL---NFKVEYVNGNVPDLLKELKNGEIDLVFG---INKLPAREESFKFT 113

Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +  D   FI  +K      +  L+G  +    G      + DY K  N+    +    
Sbjct: 114 NKSINDELNFIYTNKNIKYGDLEALNGMKMGYIEGELDNEWILDYLKKRNINVELVNGSS 173

Query: 179 VEEIDAAYRAHRCDAYTGD 197
            + +      ++ D    +
Sbjct: 174 YKAVKTLLIHNKVDFIVDN 192


>gi|239907745|ref|YP_002954486.1| GGDEF domain protein [Desulfovibrio magneticus RS-1]
 gi|239797611|dbj|BAH76600.1| GGDEF domain protein [Desulfovibrio magneticus RS-1]
          Length = 458

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 86/277 (31%), Gaps = 17/277 (6%)

Query: 5   FFVSILCLIILFFTSFSTNAS----ILGD---IKKRGFLKCGINTGLVGFAEVKANGDWK 57
               +  L  L   +    A        +   I+  G +   ++     F  + A G ++
Sbjct: 1   MLTCLAWLGFLACLAGPARAELANFTPEERAYIRDLGPVTVCVDPDWPPFERLNARGQYE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G   D  R  +         +     N  E   A +  +  +L    + T  R+    L 
Sbjct: 61  GVGADLFRLAAEVAGLRYRIVP--TANWDESVAASKDGRCRLL-AFLNQTPARDEW--LL 115

Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F P  + D   FI  ++   I+  ++L+G +I   +GT+ E  +   +         +  
Sbjct: 116 FTPPLFTDANVFITREEHFFIADPAELTGETIVFPSGTSMEERVRRDYP----NLRILNS 171

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
               E        + D     +             +  +        + L   + +    
Sbjct: 172 ASEREALDMVSERKADMTLRSLVVAAYTIKKEGLFNLKIAGKLPGYDNALRIGVSKDMPR 231

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             +I+S     +  AE   I  ++++   +  T+  +
Sbjct: 232 LRDILSKAVRTITPAEREEIVNRHVSINVETMTDYGL 268


>gi|77458091|ref|YP_347596.1| Hpt sensor hybrid histidine kinase [Pseudomonas fluorescens Pf0-1]
 gi|77382094|gb|ABA73607.1| Hpt sensor hybrid histidine kinase / amino acid-binding domain
           sensor hybrid histidine kinase [Pseudomonas fluorescens
           Pf0-1]
          Length = 1069

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 14/221 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G             +G + G        +S         +     +   +   L++
Sbjct: 298 VVRVGAVDDFAPLTFFDTDGRFSGLVAQLLNLISQRSGLTFEVV--RGQSLDRQVEQLRN 355

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAG 153
            ++D+L      T  RE    + F           I   K +   S+ +++G  + +  G
Sbjct: 356 GELDLLPV---MTPSRERETQMLFTRSYANSPFVLITESKAQAPRSLEEMAGKRLALYRG 412

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 L DY   H  + + I      +   A    R DA     S L A    + +  E
Sbjct: 413 ----NPLRDYLLEHVPQINLIELPSPADGTRALFDGRADA--TLSSLLVARYQIDHQYRE 466

Query: 214 HVILPDIISKSP--LAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            + +   +   P  +A A      +  +I++     +   E
Sbjct: 467 RLRIASTLGDQPARIAMATAPDAPQLQSILNKALLGIAPQE 507



 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 99/323 (30%), Gaps = 42/323 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDI--------------------KKRGFLKCGI 40
           M       +L +++L  T  +T A  L  +                    +    L+ G 
Sbjct: 1   MIWPLRFVLLSILMLASTVHATEAQRLEIVSRTRLEGVQIQLDEQDRQWLRAHPVLRIGA 60

Query: 41  N-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           +      F   +   + +G   D+  A++  +  D         N      AL++ ++D+
Sbjct: 61  SWPDYPPFELTRKRHELEGLTADYADAIAQILNIDVEVWC--HANRASAMAALKAGEVDL 118

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           L   T           L        D   ++    + +     L+G  I +        T
Sbjct: 119 L--GTSNNFEI-ADPELMLSRAYAEDQPMWVTRLNEALPD--DLAGKRIAMVDDYLPAST 173

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           + + +           +  + +   A    R D Y GD  +   L  T+ +    +  P 
Sbjct: 174 IEEAYPKA----SLQRYRSILDALGAVAFGRDDLYLGDFISASYLINTHFQNDLQLAGPS 229

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYA----MVTAEELGITQKNINQVSKD--TTNPDV 273
            +  +P   A+ + +     +V     A       A EL  +    +  ++   + +   
Sbjct: 230 GLDANPFGFALARSNIRLKRLVDKALLAIPMEQRLAMELRWSAGRADIAAQSRVSLSDSE 289

Query: 274 QRFLGIDKSSNIGEALGLTKDWT 296
           Q++L       +G       D+ 
Sbjct: 290 QQWLDQHPVVRVGAV----DDFA 308


>gi|153855008|ref|ZP_01996221.1| hypothetical protein DORLON_02227 [Dorea longicatena DSM 13814]
 gi|149752505|gb|EDM62436.1| hypothetical protein DORLON_02227 [Dorea longicatena DSM 13814]
          Length = 266

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 6/102 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L    N     +     +    G DVDF +A++  +     ++    +       A
Sbjct: 171 SNGKLVMATNAAFEPYEYY-EDNKIVGVDVDFAQAIADKLG---MELTVNDMEFDSIIAA 226

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           + S + D  +     T  RE    + F    Y   Q  I+ K
Sbjct: 227 VDSGKADFGAAGMTVTKGREK--QVDFSDSYYTGKQMIIVKK 266


>gi|290509889|ref|ZP_06549260.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
 gi|289779283|gb|EFD87280.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 262

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 70/253 (27%), Gaps = 20/253 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     +   + +L   +    S +     +  I     ++ G       + +      W
Sbjct: 1   MKFFTSRFMSILLLIPGMFLTQSPAQAGEEINTILPDHVIRVGAVNAPPWYQKDLLTNQW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   D  +A+     +   KI+Y+          LQS + DIL     +    E +  +
Sbjct: 61  TGLVPDVVQAIFK---NTDIKIEYVDTQWGTAVAGLQSNRFDILGG---FNNTPERAKAV 114

Query: 117 AFRPITYFDGQGFIM----HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F         G +      +K         S   +    G+     L            
Sbjct: 115 DFTRPMGSHQMGVLTLEKETQKYQRWDTINTSQTRLSAIDGSAAVTLLQPQLDKAQW--- 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I+    + +     + R DA   +   +        + +  + LP     + +   + +
Sbjct: 172 -IIVPDSDNMQLQMESGRADAIVTNDIQMAQYIQKRHQGTMIIPLPVKEQATNMG--LRK 228

Query: 233 GDTEWYNIVSWTH 245
              E    ++   
Sbjct: 229 ERPELQAWLNGRL 241


>gi|225620914|ref|YP_002722172.1| family 3 extracellular solute-binding protein [Brachyspira
           hyodysenteriae WA1]
 gi|225215734|gb|ACN84468.1| extracellular solute-binding protein, family 3 [Brachyspira
           hyodysenteriae WA1]
          Length = 261

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 13/213 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L+ GI           +N +  GFD D  + ++        KIQ++P+   +   AL+ 
Sbjct: 45  TLRVGIYIYDYPM-LHLSNDNVGGFDYDLMKKIAD---MSGFKIQFIPMQFDDLITALRI 100

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153
           K IDI+      T  R+    + F       GQ  +++K+   I + + L G ++     
Sbjct: 101 KDIDIIIAAMSITEERKKL--VNFSDSYLTAGQSIVVNKENTNIITTNDLIGKTVGAIKN 158

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T ++LT +     H        F+       + +  + DA   D          +     
Sbjct: 159 TVSDLTASKIEGIHK----VERFDIAGSAFLSLKTGKIDAMVVDKLTCINYLQYDKDLKI 214

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              +           A+ + D    N ++    
Sbjct: 215 VETIEFPEIG--YGIAVRKEDNILLNKINSGLK 245


>gi|254471847|ref|ZP_05085248.1| ABC transporter, periplasmic amino acid-binding protein
           [Pseudovibrio sp. JE062]
 gi|211959049|gb|EEA94248.1| ABC transporter, periplasmic amino acid-binding protein
           [Pseudovibrio sp. JE062]
          Length = 290

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 15/218 (6%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K    ++         F    +     G++VD  R +  ++    +      L       
Sbjct: 57  KAPERIRFIAADDFPPFIFRDSEERLMGYNVDLAREICQSL---KAACSLKILPFNHLAN 113

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149
            + + + D +      T        L+F  I       F+  K+  +  + + + G  + 
Sbjct: 114 TVANGEADAVIAGVSMTPA--NLEKLSFSQIYMRFPGRFVTSKRSTLEPLPETMGGKRVA 171

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  G+  E  L  +F         + FE  E    A  +   DA  GD   L     T  
Sbjct: 172 VVQGSRHEAFLERFF----TDAIAVPFENEELARNALVSSEVDALFGDGMRLSFWLDTQK 227

Query: 210 RPSE-----HVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                       L        LA A   G+T+  N ++
Sbjct: 228 ASGCCKFAGGPWLDPSYFSGGLAIATKAGNTKMLNAIN 265


>gi|312962881|ref|ZP_07777368.1| Membrane-bound lytic murein transglycosylase F [Pseudomonas
           fluorescens WH6]
 gi|311282908|gb|EFQ61502.1| Membrane-bound lytic murein transglycosylase F [Pseudomonas
           fluorescens WH6]
          Length = 486

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 72/240 (30%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +   + L  ++     S L  IK+ G L+         +     NG+  GF+ +  +  
Sbjct: 15  LVATGLFLLLSACVDKPSTLERIKEDGVLRVITRNSPATY-FQDRNGE-TGFEYELVKRF 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +           L+     L   +  +   +         +    + F         
Sbjct: 73  ADDLGVKLEIETADNLDDLFGQLGKPNGPVLAAAGLVG---SEQRQQQVRFSHPYLEVTP 129

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             I    +   ++ + L G  I V  G+T    LA+  K +  ++Y       V ++   
Sbjct: 130 QIIYRNGQSRPTNAADLVGKKIMVLKGSTHAEQLAELKKQNPAIEYEESDAVEVVDLLRM 189

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + +   ++          L +  ++S         D    N ++   
Sbjct: 190 VDEGQIDLTLVDSNEVAMNQVYFPNVRVAFDLGNASNQS--WAVAAGEDNSLLNEINSYL 247


>gi|152970449|ref|YP_001335558.1| ABC transporter, substrate binding protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150955298|gb|ABR77328.1| ABC transporter, substrate binding protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 297

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 86/301 (28%), Gaps = 37/301 (12%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDI------KKRGFLKCGINT 42
           M +     +L    +   +             + +   +  I       + G L   I+ 
Sbjct: 1   MNRALMTLVLSAFAMSAHAALDLRANEQPLPVTRDPQAIAKIPPGYRFVEPGTLTVAISA 60

Query: 43  -GLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 A + ++     G D D  R L+ ++     K++ +P   ++  L + S + D+ 
Sbjct: 61  LNSPPLALLASDNRTRIGSDPDIARLLAGSLG---LKLRLVPTAWEDWPLGIASGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N   T  R+      F      D   F +     I   +  + L+G  + V +GT  E
Sbjct: 118 LINIAVTEKRKE--KFDFA-TYRVDSLAFSVKSTSDIVAVNGPADLAGRKVIVGSGTNQE 174

Query: 158 LTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             L     D   A   +  P+        +   ++ R D + G  S        N +   
Sbjct: 175 RILLGWNEDNRAAGRPQAQPVYLTDDASGNLYIQSGRADIFFGPQSVAAYKAALNGQTRV 234

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             + P             +        +       +T  E         +  +      V
Sbjct: 235 VGLGPKKAWV----ATTTKKGNGLVYALQAALDGAITRGEYQQVLARWGEQGEAVAQSVV 290

Query: 274 Q 274
            
Sbjct: 291 N 291


>gi|144901272|emb|CAM78136.1| Predicted bacterial periplasmic substrate-binding protein
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 272

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 9/157 (5%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            GI T    F     +G   GF+V+  R L + +          P    +    ++    
Sbjct: 47  VGITTTAQPFVITDPSGRLDGFNVELARLLCARMG---RTCSLEPTTFPQLLSRIEEGTF 103

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTT 156
            +   NT  T  RE    + F    +     F+    +  I      +    CV   +  
Sbjct: 104 QMGFGNTLKTPEREK--KMLFSAPIWRSTSSFVTATTRPAIDPPQARAQLRTCVVRKSMQ 161

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
           E  LA          + +      E+        CDA
Sbjct: 162 EAFLAAQP---GPDENIVAISTYRELFDGLTGGACDA 195


>gi|255022563|ref|ZP_05294549.1| hypothetical protein LmonocyFSL_01834 [Listeria monocytogenes FSL
          J1-208]
          Length = 87

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 12/83 (14%)

Query: 1  MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49
          M K     F +IL + I+ F+      +  T    L  I+++G L  G++     +    
Sbjct: 1  MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLTKIQEKGVLTVGLSADYPPYEFHQ 60

Query: 50 -VKANGDWKGFDVDFCRALSSAI 71
           +       GFDV     ++  +
Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL 83


>gi|332172927|gb|AEE22181.1| extracellular solute-binding protein family 3 [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 591

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 14/237 (5%)

Query: 4   DFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            F    +  + L  ++         L  +   G L+ G   GL            +GF+ 
Sbjct: 6   SFRYGFVLAVSLILSACDEPKKQDSLQQVLDTGILRVGTIYGLT--TYYNGPNGPEGFEY 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +     +  +        Y  +N  E F  L +   D+++      +  E      F P 
Sbjct: 64  ELAAGFADYLGVKLEIFPYYTVN--ELFPQLDNAHFDVIAAG--INVSPERYSQFRFGPA 119

Query: 122 TYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERV 179
                Q  +  +       +  L+G +  V AG+    TL ++   H ++ +     +  
Sbjct: 120 YQNVSQKLVFKQGDVRPRELEDLTG-NFMVVAGSGHSETLRNFKAEHPDLSWQETNDKDS 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           EE+  A  A   D    D + L  ++      S    L        +A A  +   +
Sbjct: 179 EELLEAVLADELDYTVVDSNILALMRRRYPELSIGFSLSQSQG---IAWATSKKGDD 232


>gi|225871087|ref|YP_002747034.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
 gi|225700491|emb|CAW94929.1| extracellular solute-binding protein [Streptococcus equi subsp.
           equi 4047]
          Length = 275

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/257 (10%), Positives = 68/257 (26%), Gaps = 20/257 (7%)

Query: 1   MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K     +  L   +      +++       +++  ++   +     F          G
Sbjct: 1   MTKQLQRALFFLLASLGLLAVVTSHEVT---ARQKEVIRVATDAATKPFTYR-KKHSVTG 56

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           +D++  + +         ++    +        + + +  I + N      +E +    F
Sbjct: 57  YDIEVLKRVFK--GSKKYRLSIEVVPFPSILAGIDAGRYQIGANNFG--YSKERAEKYLF 112

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE- 177
                          K+   S++ LSG      AG+   L L  + ++H  +    +   
Sbjct: 113 SSPISASHYALATKGKQQYKSLADLSGKKTQGIAGSNYMLILEKWNQSHPDQKPIHLTYA 172

Query: 178 ----RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAP 228
                  +        + D    D  +L  +            L +              
Sbjct: 173 SESTPFTQRLQLLENGQLDFLFYDAISLTTVAEEQGFDVHVTKLKEQADTAKDGLEYYVF 232

Query: 229 AIIQGDTEWYNIVSWTH 245
           A  Q      + V+   
Sbjct: 233 ANDQKGKALQSFVNKRL 249


>gi|157363710|ref|YP_001470477.1| metal dependent phosphohydrolase [Thermotoga lettingae TMO]
 gi|157314314|gb|ABV33413.1| metal dependent phosphohydrolase [Thermotoga lettingae TMO]
          Length = 677

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 24/246 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+ I   I     S                +    +     F  +  +G   G  
Sbjct: 1   MKKLLFIIIFLAIFSCGFS--------------KKIVVATDIDYPPFTYIDQDGKLIGIS 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                  S     +   ++ +P+N  E     +  ++D+L      T  R+  L     P
Sbjct: 47  QQLWTLFSERTGIE---VELIPMNWSEALEKAKRSEVDVLDLVF-MTQERKEFLNYT-IP 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I       +       I+++S LS   + V+ G      L +  K  +       ++   
Sbjct: 102 IYTITSSIYYDRDLPAINNLSDLSPYIVGVKKG----DALYEIAKKSSSTVQFKFYDTYA 157

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  A +    + +  D        L        +   +  S + L  A+ +  +E   I
Sbjct: 158 QLAEAIKNSEIEVFLMDD-IPAQYYLHRYDLVYEIRKSEPFSSNQLYWAVPKPKSEILQI 216

Query: 241 VSWTHY 246
           ++    
Sbjct: 217 LNEGLN 222


>gi|167899019|ref|ZP_02486420.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 7894]
          Length = 250

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 14/182 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I       A          G D D+ + ++ A+     ++  +P+   +  L L
Sbjct: 1   GAFTVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGL 57

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            + + D +  N   T  R+      F         GF +     I+       ++G  I 
Sbjct: 58  SAGKYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRII 114

Query: 150 VQAGTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             +GT+ E  L ++ + +  +       + F+       A  + R DA     + L    
Sbjct: 115 TASGTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQA 174

Query: 206 LT 207
             
Sbjct: 175 AR 176


>gi|170723351|ref|YP_001751039.1| putative transglycosylase [Pseudomonas putida W619]
 gi|215275674|sp|B1JDH3|MLTF_PSEPW RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|169761354|gb|ACA74670.1| Lytic transglycosylase catalytic [Pseudomonas putida W619]
          Length = 485

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 82/289 (28%), Gaps = 21/289 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K  F + L    L   +     S L  +K+ G L+         +     NG+  GF+ +
Sbjct: 13  KWLFATGL---FLLLGACVEKPSTLERVKEDGVLRVITRNSPATY-FQDRNGE-TGFEYE 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +  +  +           L+  E F  L      +L+        R       F    
Sbjct: 68  LVKRFADDLGVKLEIETADNLD--ELFDDLGKPSGPVLAAAGLVNSER-RKTQARFSHPY 124

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVE 180
                  I    +   +    L G  I V  G++    LA+  + +  ++Y       V 
Sbjct: 125 LEVTPQVIYRNGRSRPTDPKGLVGKKIMVLKGSSHADQLAELKRRYPGLEYEESDAVEVV 184

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++       + D    D + L   ++          L +  ++          D    N 
Sbjct: 185 DLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGETRNQR--WAVAPGEDNSLLNE 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
           V+         E L  +QKN                LG   +    + L
Sbjct: 243 VN---------EFLDKSQKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHL 282


>gi|218457986|ref|ZP_03498077.1| amino acid ABC transporter substrate-binding protein [Rhizobium
           etli Kim 5]
          Length = 193

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI- 137
             + ++      AL+SK+ D++  +   T  R     + F    Y      I  K +   
Sbjct: 1   SIVDISWDGLIPALESKKFDVIWSSMSNTAERSKV--IDFTDKYYNTPSTLIGPKDQKPG 58

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           ++   + G +I +Q  T        YF           ++ ++E      + R D   GD
Sbjct: 59  ATAEDVKGKTIGIQVSTIQSEYYKKYFAEA---ADEKTYQTLDEAFQDLASGRIDYVFGD 115

Query: 198 ISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
             AL   LK    +     +      K  L   +  G  +    +     A + A     
Sbjct: 116 SLALDAFLKSDGGKDCCAKMGDVADDKEILGAGVSGGLRKEDTELKAKLNAAIAA---VR 172

Query: 257 TQKNINQVSKDTTNPDV 273
                + ++K   + D+
Sbjct: 173 ANGQYDAITKKYFDFDI 189


>gi|313674176|ref|YP_004052172.1| pas/pac sensor signal transduction histidine kinase [Marivirga
           tractuosa DSM 4126]
 gi|312940874|gb|ADR20064.1| PAS/PAC sensor signal transduction histidine kinase [Marivirga
           tractuosa DSM 4126]
          Length = 673

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 79/261 (30%), Gaps = 23/261 (8%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    + FF+ +L   ILF    + + + L        +  GI+     +  +  +G+  
Sbjct: 1   MKLLSRTFFLPLLFPFILF--GQAKSNNTLPQ----KSINYGIDKTYEPYEFLNEDGNVD 54

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF+V+  +A+ + +  +   +   P + K     L+    +        +  RE    + 
Sbjct: 55  GFNVEIIKAIGNELNWN---VTIYPDDWKVIRRKLEETN-EFDVAAYFKSAEREG--NIL 108

Query: 118 FRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPI 174
           F                   +  +  LS   + +Q  T     + +YF            
Sbjct: 109 FSRPISLVYYSIFTRSDKDPVEDLFSLSSKKVAIQEAT----IVEEYFNQLGFLDLRELQ 164

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E   A      D            K+  +         D +  +     + + D
Sbjct: 165 TYSSESEAIDAVVRGDADCAITSFMTTN-YKMEVENIDNIQSSSDPVFITEYCFVVNKKD 223

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
           +   + ++W    +  + E  
Sbjct: 224 SALLDSLNWGLRLVKASGEYD 244


>gi|300715817|ref|YP_003740620.1| Extracellular solute-binding protein family 3 [Erwinia billingiae
           Eb661]
 gi|299061653|emb|CAX58769.1| Extracellular solute-binding protein family 3 [Erwinia billingiae
           Eb661]
          Length = 295

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 54/227 (23%), Gaps = 25/227 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL--------------GDIKKRGFLKCGINTGLVG 46
           M K    + + L +      +  A  +               DIK  G +    N     
Sbjct: 1   MKK--IATAIALALGLSAGCAQAADAIPAQKVDQALHDRLPADIKTAGKMISVNNGSFPP 58

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           +  V+      G   D   AL+  +           L+       ++S +  +       
Sbjct: 59  YEIVEGPTTMTGASADLTEALAQLLGIKIEHATVSGLSG--VLAGIKSGRYQLAIGPIG- 115

Query: 107 TLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--- 162
               +      F                   I+ +    G  I V A  + E  +     
Sbjct: 116 -DYPDRQAKNDFIDFVQEFVVFAVQKGNPAQINGLDDTCGKRIAVMAAGSAEQVIRKQSL 174

Query: 163 -YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               A         F        A R+ R DA+    + L       
Sbjct: 175 VCTDAGKPAVTVQSFTDQPSSILAVRSKRSDAFFSSQAPLVYFVDQA 221


>gi|120610911|ref|YP_970589.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1]
 gi|120589375|gb|ABM32815.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 256

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 63/223 (28%), Gaps = 14/223 (6%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             +   +   G ++  I  G  G            G D++  +  +  +     ++ Y+ 
Sbjct: 17  GPVAERVTAHGVVRVCIWPGYHGVTYRDPRTRTLSGMDIELSQHFARELG---VRLDYVD 73

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SS 139
            + +     L   + D+        L R     L F           I  K   +    S
Sbjct: 74  SSMETVVGDLLDSRCDVAMFALGMLLPR--LQHLQFSQPYLQSSVLAIAAKGSSVVRQWS 131

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                G ++ VQ+G   +      FK        +     +  +    + R DA+    S
Sbjct: 132 DLDRPGIAVAVQSGAVIQFEAERQFK----HARVVPVRLPDTRERELLSGRVDAFMTT-S 186

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                       +  V  P      P   A+  GD +W   V 
Sbjct: 187 VYARQFARKAEWARIVAPPRPGFTIPAGYAVRPGDAQWLATVD 229


>gi|117926684|ref|YP_867301.1| multi-sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
 gi|117610440|gb|ABK45895.1| multi-sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
          Length = 2654

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 11/225 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G++     F  +  NG  KG   D+ + +  +I      +    L+ +      +  
Sbjct: 527 IRLGVDPARPPFEFMDRNGIHKGMISDYVKEVEQSIGVRMEPV--QNLDWEAMLARAKRG 584

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154
           +ID++S     +   E      F           +             L    + V  G 
Sbjct: 585 EIDVISA---LSPSPERRKQFLFSRPYMQVPIAVLTRNTVEDLQKMDNLRETRLGVVKGY 641

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
            TE  +      ++ +     ++ +E    A      DA   +  A           +  
Sbjct: 642 MTEELVRR----NHPQQKIFPYKNLEVALKALSVGEVDALLANQLAAVHRVNELAITNLK 697

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           V      S   LA  I Q       I+     A+  +E   I + 
Sbjct: 698 VNFVSPYSDD-LAFGIRQDWQPLVAIMDKAIAAIPASERERIQRS 741



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 79/257 (30%), Gaps = 30/257 (11%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL---QSKQI 97
                 F  V   G   GF +DF   +++ +      +    +        L   Q  ++
Sbjct: 281 EQDYPPFNYVVE-GRPSGFSIDFMDLVAAKLG-----LTIRYVTGPRWSEFLEQMQQGKL 334

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTT 156
           D +  N   T  R+    L F      +   F+  + +  +    +L G  + V  G   
Sbjct: 335 D-IMLNIVQTEARD--HYLNFTRPYVDNPPVFVTRQDQPPVRRFEELVGRRVAVPEGFFY 391

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA--LYALKLTNDRPSEH 214
           +  + + +            + + E   A      DA  G ++                 
Sbjct: 392 QELMGNRYPEIQQHLT----KGMLEALQAVAGGEADAAVGGLAIENWLIQTYGLTNLRVD 447

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            ++ D    + L  A+ +       ++     A+   EELG  Q+     + D  +  V 
Sbjct: 448 SLIRDTAFSNQLRMAVHKEQPLLAALLQKGIDAVTQ-EELGALQRKWFGGAVDPGSERVA 506

Query: 275 RFLGIDKSSNIGEALGL 291
                     +GE LGL
Sbjct: 507 ----------VGENLGL 513


>gi|229591025|ref|YP_002873144.1| putative amino acid ABC transporter periplasmic amino acid-binding
           protein [Pseudomonas fluorescens SBW25]
 gi|229362891|emb|CAY49801.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Pseudomonas fluorescens SBW25]
          Length = 260

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 66/218 (30%), Gaps = 10/218 (4%)

Query: 37  KCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           K G       F  +   +   +G  VD   A+  A        Q    N      +L S 
Sbjct: 33  KVGATASGSPFTFLDIKSNSIQGVMVDVAEAVGKAGG---FTSQIEQTNFAALIPSLTSG 89

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++D +S     T  R   +  +     Y +G             +  L    + VQAGT 
Sbjct: 90  KLDFISAGMLKTEERTKVVDFSAPVYAYGEGLIINTDDNTAYPDLMPLKDQVVGVQAGTV 149

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL-KLTNDRPSEH 214
                 D      +      ++ + E+       R  A  GD   +    +    +  + 
Sbjct: 150 FY----DQLNKLGIFKEIRTYDSIGEMVRDLSLGRIKAAVGDQPVVAYQIRQKLFKGVKL 205

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                  +   +   + +GDT+    ++    A + A+
Sbjct: 206 APDYKPTNVGEVCLVVRKGDTKTLERLNTAI-ASIKAD 242


>gi|206563413|ref|YP_002234176.1| putative solute-binding protein [Burkholderia cenocepacia J2315]
 gi|198039453|emb|CAR55420.1| putative solute-binding protein [Burkholderia cenocepacia J2315]
          Length = 310

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +     +       L
Sbjct: 61  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLVLLPIAWADWPL---GL 117

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+       ++G  I 
Sbjct: 118 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTASPIAKIAEPKDIAGLRII 174

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ K +  +       + F+       A  + R DA     ++L    
Sbjct: 175 TGAGTSQERILLEWSKRNVAQGLKPAELLYFDDDATARVALLSGRADAELNPNASLAYEA 234

Query: 206 LTNDR 210
               +
Sbjct: 235 ARTGK 239


>gi|291613922|ref|YP_003524079.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Sideroxydans lithotrophicus ES-1]
 gi|291584034|gb|ADE11692.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Sideroxydans lithotrophicus ES-1]
          Length = 1149

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 65/194 (33%), Gaps = 18/194 (9%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +LC+  L     +              ++ G+           ANG   G  VD   
Sbjct: 7   LRILLCIGFLSLAGNTCAT----------EVRVGLYENEPKI-FTDANGAPSGILVDLLN 55

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF-RPITYF 124
            +++    +  ++ Y+P   +E    L++  ID++          E +L   F      +
Sbjct: 56  TVAAE---EKWQLSYVPCTWEECLKELEAGSIDLMPD---VAFSPERALHFDFHTTPALY 109

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                   K   ISSV  L G  I + AG   E  +   F   N+K   I    VE+   
Sbjct: 110 SWSQIYSRKGVDISSVLDLKGKRIALLAGGIQESAITAMFSGFNIKVQLIRTRSVEDAFR 169

Query: 185 AYRAHRCDAYTGDI 198
             R+ + DA     
Sbjct: 170 LTRSGQADAAVASH 183


>gi|194017321|ref|ZP_03055933.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
 gi|194011189|gb|EDW20759.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus ATCC 7061]
          Length = 286

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 85/255 (33%), Gaps = 13/255 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKANGDWK 57
           M +   F +S + L+ L     S+  +   D   R  +K  ++  +   F       +  
Sbjct: 1   MKQKTAFMMSGVLLLFLSLMGCSSVKTTTDD--GRKIVKVALSAEVNPPFLATNDRNEPI 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+++D+   + + +        Y+    +   + + + + ++ +        RE      
Sbjct: 59  GYNIDYLNEVENRL--PHVHFDYIFGEEESNLIGVGAGKFEMAANWFFSNPEREKRFLYP 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE-LTLADYFKAHNMKYHP--I 174
             P  Y      +    K I S+  ++   +   + +      L  Y K H+       I
Sbjct: 117 KVPYGYSMTGLIVNESDKEIRSLDDMTSKKLAPVSPSGGLRSILNQYNKEHDPDIPLTTI 176

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                E       + R DA   +IS    ++      +  V +  I+SK P+   +   +
Sbjct: 177 ESPSNELNLKRVESGRSDAAFMNISTFDTIQ---KHLNLKVRVGGIVSKEPIYLVLQPSE 233

Query: 235 TEWYNIVSWTHYAMV 249
            +    +      M+
Sbjct: 234 KQLAEDLDRITQEMI 248


>gi|148358245|ref|YP_001249452.1| glutamine ABC transporter [Legionella pneumophila str. Corby]
 gi|296105598|ref|YP_003617298.1| glutamine ABC transporter [Legionella pneumophila 2300/99 Alcoy]
 gi|148280018|gb|ABQ54106.1| glutamine ABC transporter [Legionella pneumophila str. Corby]
 gi|295647499|gb|ADG23346.1| glutamine ABC transporter [Legionella pneumophila 2300/99 Alcoy]
          Length = 242

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 81/248 (32%), Gaps = 28/248 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +  F+ ++ +    F                  L  G+      F      G+ + GF
Sbjct: 1   MKRFMFILLIFINFHAFG---------------KPLIIGVPDFAPPFVSRSGGGEFYFGF 45

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D   ++   I     + QY  +N ++ +  L + ++DI+   T             F 
Sbjct: 46  NIDLMNSICKII---EEECQYKGMNIQQLYTNLNAGKVDIMLAPTPIVST--AGTNYIFS 100

Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                     +       I++++ L G  +     T     L ++F+ +      + F +
Sbjct: 101 LPYLPSNAQIVTLKANDHINALTDLKGKKVGTLKYTLYGGLLQEHFQDY---VDLMQFSK 157

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237
           + ++  A      +A   +  A  A    ++  +E   + D I   +      ++ +   
Sbjct: 158 LPDMAIALSNREIEAVVLN--ANAAKYAMSNSATELKFVGDPIPIGNGYGILALKNNAPL 215

Query: 238 YNIVSWTH 245
              ++   
Sbjct: 216 IMKINKAL 223


>gi|256822034|ref|YP_003145997.1| lytic transglycosylase catalytic subunit [Kangiella koreensis DSM
           16069]
 gi|256795573|gb|ACV26229.1| Lytic transglycosylase catalytic [Kangiella koreensis DSM 16069]
          Length = 496

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 10/215 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L  ++++G++K            V  +G + GF+ D  +  +  +      +     +  
Sbjct: 33  LERVQEQGYIKVYTRISPTTM-YVGEDG-FSGFEYDLVKLFADELGVRVQIV--TENDIA 88

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           +    + S + D  +     T  RE    L F P         +  +             
Sbjct: 89  KILREVASGRADFAAAGLTITRQREEY--LRFGPPYQEITSKMVYKQGNDRPRDFSQVDK 146

Query: 147 SICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           ++ V A ++    L    + +  + +        +++       + D    D + L   +
Sbjct: 147 NLTVVANSSHSEALLKSQQDYPELSWTERSDLTPQDLLDGVLDGQFDYTIVDSNELQLAR 206

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
                 +    + +      LA A  + +     I
Sbjct: 207 QVQPELAVAFSVSEP---EQLAWAFRKENDNSLYI 238


>gi|312960110|ref|ZP_07774622.1| two-component system, NarL family, sensor histidine kinase EvgS
           [Pseudomonas fluorescens WH6]
 gi|311285604|gb|EFQ64173.1| two-component system, NarL family, sensor histidine kinase EvgS
           [Pseudomonas fluorescens WH6]
          Length = 1202

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 14/229 (6%)

Query: 31  KKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           ++R  L  G++      F       + +G   D+   ++ A+       +Y      E  
Sbjct: 55  RERRTLVMGVSAPDYAPFDLSNNKDELEGITADYAALVAQALNVAIEVRRYD--TRDEVI 112

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
            AL++  +D L               L        D    +    +  +  + L+G  + 
Sbjct: 113 EALKTGAVDFLGSA---NGYEAADPQLVLSRSYANDQPALVTRAGESHTLSADLAGKRVA 169

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           +        T+  ++       H ++F    E   A    + D Y GD  A+    L N 
Sbjct: 170 MLYHYMQPETVQAFYP----DAHLVLFASTFEAIGAVAFGQADVYLGD--AISTRYLINK 223

Query: 210 RPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
               +V + D  +    P   A ++ +T   NI++    A+  ++++ I
Sbjct: 224 NHLNNVRMADFSALEVNPFGFAFVKDNTRLLNIINAALVAVPASQQMEI 272



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 68/223 (30%), Gaps = 15/223 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++  +    V  +     G ++G   +    +S               +   +     + 
Sbjct: 305 VRVAVLDKFVPLSFFNEQGQFEGLSAEVLSRISLRTGLKFDVE--QGSSLPRQVDETSTG 362

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154
           ++D+L+     T   E S  + F      +    ++      + ++  + G  +    G 
Sbjct: 363 RVDMLAV---ITPSVERSEKIRFTRPYLSNPYVIVVPVGNDRLVTLDNMPGKRLAFIGGN 419

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           +    +A  +         +  E  E           DA    +S + A  +      + 
Sbjct: 420 SLAAQIARDYP----GIEFVDVENPETALEMVAKGTVDA--TIVSLISARYMIARHYRDR 473

Query: 215 VILPDIISKSP--LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +   +   P  +   + +   E Y+I+       ++ EE+ 
Sbjct: 474 LRITSTVGAEPARITFGVNRSQLELYSILDKALL-SISPEEMD 515


>gi|4191606|gb|AAD09825.1| YbeJ [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 102

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 5/77 (6%)

Query: 3  KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
          +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69

Query: 58 GFDVDFCRALSSAIFDD 74
          G+  D+  A+  A+   
Sbjct: 70 GYSQDYSNAIVEAVKKK 86


>gi|289163610|ref|YP_003453748.1| arginine 3rd transport system periplasmic binding protein
           [Legionella longbeachae NSW150]
 gi|288856783|emb|CBJ10594.1| putative arginine 3rd transport system periplasmic binding protein
           [Legionella longbeachae NSW150]
          Length = 244

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 68/209 (32%), Gaps = 22/209 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M + F + ++ L        +              +  G       +A        +G D
Sbjct: 1   MKRIFGIFLIYLTFHLPVKAA--------------VIIGTPIYDPPYAVNDKIIGVRGLD 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    + S +  D     Y+P++  +   AL + +ID        T  RE      F  
Sbjct: 47  IDIMNIICSRLQWD---CHYVPMHYFDLLSALDAGKIDFAIGALVITPDREG--KYLFTL 101

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                   F++     ISSV++L    I V  G      L+        KY  I ++R  
Sbjct: 102 PYMISDGAFLLKIDNPISSVNELEAKRIGVLQGREYLNYLSQN---KVGKYTIIGYQRPV 158

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209
           E+  A   +  DA  G+   +  L     
Sbjct: 159 ELVNALYNNEIDAIFGNYLTVSYLHSQYP 187


>gi|223985330|ref|ZP_03635403.1| hypothetical protein HOLDEFILI_02709 [Holdemania filiformis DSM
           12042]
 gi|223962702|gb|EEF67141.1| hypothetical protein HOLDEFILI_02709 [Holdemania filiformis DSM
           12042]
          Length = 968

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 86/277 (31%), Gaps = 31/277 (11%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K    F+ I CL +     F   AS+     +   ++ G      GF E    G + G
Sbjct: 1   MKKRRLIFMLIFCLGLNGMIPFLRTASVRA---ETPVIRVGY-IDYAGFIEEDGAGKYTG 56

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           + V+    +S           Y+  + ++    L    ID++          E +    F
Sbjct: 57  YGVELLERISRITGWRYE---YVYGDWQQILSQLDEGSIDLI---MTAQYTEERADQFLF 110

Query: 119 RPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
                 D    +  ++           + G  I +  G+    +  DY + H +      
Sbjct: 111 SQQPIGDELAVVYAREDASVYYDDSAAMDGLRIGLLQGSYQNQSWQDYAEKHGLNCPATE 170

Query: 176 FERVEEIDAAYRAHRCDAYTGD--------------ISALYALKLTNDRPSEHVILPDII 221
           ++   ++  A  + + D                     A + +   + RP     + + +
Sbjct: 171 YKTENQLMEALLSQQVDLIVSGGLALHDEAKVVLKLEPAPFYIITNSARPDLMTQIDEAL 230

Query: 222 SKSPLA--PAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           ++  LA          E+Y    ++   + T EE   
Sbjct: 231 AEMLLADPYFEAHLYDEYYGDSQYSVQPLFTREEDAY 267


>gi|229513275|ref|ZP_04402740.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae TMA 21]
 gi|229349685|gb|EEO14640.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae TMA 21]
          Length = 469

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 16  KLFLLLMIAWPLLFGSMSEA--------VERQTLTIASSKAWKPYSYLDEQGQPSGILID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   IQ+  ++  +   A++  + D+ +              L F    
Sbjct: 68  FWLAFGEANHVD---IQFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPL 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   ++ V  G        ++ +    +   I +   E +
Sbjct: 122 LTIDTQLYVHRTLLGDKLDTLLSGTMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 182 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 240

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 241 Q-GFAQLSSNEKN 252


>gi|254448115|ref|ZP_05061578.1| extracellular solute-binding protein, family 3 [gamma
           proteobacterium HTCC5015]
 gi|198262241|gb|EDY86523.1| extracellular solute-binding protein, family 3 [gamma
           proteobacterium HTCC5015]
          Length = 489

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 59/318 (18%), Positives = 102/318 (32%), Gaps = 29/318 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I+ RG+L      G          GD  GF+ D     +  +  +       P +
Sbjct: 43  SQLERIQDRGYLNAITRFG-PTTYYKGPEGD-TGFEYDLLSLFAEELGVELRLK--TPES 98

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQ 142
             +    L     D+ +     T  R+    + F P      Q  I      +   ++  
Sbjct: 99  FADFLPLLAGGSADLAAAGITVTDKRKEL--VTFGPPYTSTTQQLIYKSGVNRRPKNMGD 156

Query: 143 LSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
             G +I V AG+T E TL +    +  + +       +EE+         D    D S +
Sbjct: 157 TVGKTIEVLAGSTHEETLIESKALYPELDWQTDEDANIEELLKKVNDDTIDFTVADSSDI 216

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN- 260
              +           L D     PLA A  +   +     +   +  +  ++  +TQ N 
Sbjct: 217 KVNRRYMPELRVAFNLTDP---EPLAWAFPKNKDDSVLKAAQAFFDRIK-KDGTLTQLNE 272

Query: 261 -----INQVSKDTTNPDVQRFLGIDKSSNIG---EALGLTKDWTYRIIRHMGNYGEM-FD 311
                I +         ++   G      +     A+    DW  R++  +G Y E  +D
Sbjct: 273 RHFGHIKRFDYVDKRTFLRHIEGRLPLYKLSFQQAAMQNDLDW--RLLAALG-YQESHWD 329

Query: 312 RNLGNQSELKIPRGYNAL 329
            N    S   + RG   L
Sbjct: 330 PN--ATSPTGV-RGLMML 344


>gi|296535457|ref|ZP_06897647.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296264216|gb|EFH10651.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 274

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L    N  L     V + G  +G  V+    ++  +      ++   +        L 
Sbjct: 37  GTLTLSTNPTLPPMQFVDSTGALRGMRVELGSEIARRLCLKAEHVR---VEFAAMIPGLA 93

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQ 151
           +++ D+++    +T  R   + L              + +     I+ V  L+G SI V+
Sbjct: 94  ARRWDMINTGMFFTEERAKIMQL---VRYEQQAISISVPRGNPRRIAGVQDLAGLSIGVE 150

Query: 152 A----GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
                       +     A         F+       A R  + DA     S     +  
Sbjct: 151 QGGFEYNRALDIVKQVQAAGGRAPTVRAFDNFAVSFQALRVGQIDAGISIDSTAKEYETR 210

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQG 233
                +       +  +P+A      
Sbjct: 211 ----GDFTRAVSGLFATPIAFGFRSR 232


>gi|295701001|ref|YP_003608894.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295440214|gb|ADG19383.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 328

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 68/226 (30%), Gaps = 14/226 (6%)

Query: 28  GDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             I  RG L   + +     F   + NG  +G D+D  R +++ +       +       
Sbjct: 91  ARIIGRGELVVAVLSVDQPPF-FEERNGKLEGLDIDLARDMANKLHVKVRFNRDAH-TFD 148

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG------ISSV 140
           +    L   Q DI       TL R   +  +   +           K         +  V
Sbjct: 149 DVVSLLARGQADIAVSKLSRTLTRATVIAFSSPYLRLNRALLLNRVKFAQLAHGRSVPEV 208

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            +   ++I V A ++    + + F           +   +++  A  A    A   D   
Sbjct: 209 VRSFDSTIGVVANSSYAGYVVNNFP----HAQVRSYPTWDDVLKALNAGEVTAAYRDEFE 264

Query: 201 LYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245
           +  +   +   S  + +  +      LA  +   D    + V+   
Sbjct: 265 VKRVLKVDPTASLRLRVVTLQDLEDTLAIGVNVNDPALLSFVNQFL 310


>gi|160943338|ref|ZP_02090573.1| hypothetical protein FAEPRAM212_00824 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445364|gb|EDP22367.1| hypothetical protein FAEPRAM212_00824 [Faecalibacterium prausnitzii
           M21/2]
          Length = 1084

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 16/194 (8%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                   A           ++ G       F  V   G  KG+  +    LS       
Sbjct: 30  AVLPVKAAAET----ASAKVVRVGSFEDT--FNYVNEKGARKGYGYELLETLS---GYTG 80

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM---- 131
            + +Y+  +  + F  L++ +IDI+      +   + +  + F        + ++     
Sbjct: 81  WQFEYVTCDWSDCFEKLKNGEIDIIGG---ISYTEDRTQEMLFSDEPMGVEKYYLYADLS 137

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                 S    L+G  I V  GT  E+ LA++ + + +K   +     E++      H  
Sbjct: 138 RADISASDFKTLNGKKIGVLMGTEPEVMLAEWEEKYGLKTEHVNISNNEDVKQKLANHEI 197

Query: 192 DAYTGDISALYALK 205
           D +     + +A +
Sbjct: 198 DCFVSLEESFWAER 211


>gi|127513929|ref|YP_001095126.1| extracellular solute-binding protein [Shewanella loihica PV-4]
 gi|126639224|gb|ABO24867.1| extracellular solute-binding protein, family 3 [Shewanella loihica
           PV-4]
          Length = 725

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 11/217 (5%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            I+ RG L+ G     V F+     G   GFD      L+  +      ++++P    + 
Sbjct: 476 AIRARGLLRVGYIPSNVPFSYYNNAGQLVGFDSAMANRLADDLGVK---VEFIPFEKDKL 532

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
             +L +   DI           E    L +              K   ++S  +      
Sbjct: 533 AASLDAGFFDIAMSGLAM--DIEQMDKLNYVEPVLLLNLAIAT-KDHKVNSFKRNQSIKA 589

Query: 149 CVQAGTTT--ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
                        + +  KA       +  +  ++     +  + DA     SA      
Sbjct: 590 MQDTTIAYVEHSDIIEDAKAFYPNLKFVKIKGYKDFFRQ-KGDKYDALVI--SAEAGSAW 646

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           T   P   +   +  +K P+A A+ Q +    N V+ 
Sbjct: 647 TLFFPGYGIAPLEYKAKYPIAYAVAQDNQSLLNYVNN 683


>gi|189425827|ref|YP_001953004.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Geobacter lovleyi SZ]
 gi|189422086|gb|ACD96484.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Geobacter lovleyi SZ]
          Length = 860

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 38/289 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++        +++L        A+          ++ G        A    NG  +G  
Sbjct: 4   MHRMMLTVCSVVLLLMTLPLFAGAAP--------VVRVGYEQNH-PMAGTADNGKAQGIM 54

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++     +   + Y P    +    L++ +ID+L          E +   ++  
Sbjct: 55  IDIVEEIARQ---EGWTLHYAPCIWSKCLEDLENAKIDLLVG---IAYTPERAQKFSYNQ 108

Query: 121 ITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            T     G +     + I S + L+G  I V        T     +  N++   +  +  
Sbjct: 109 HTVISNWGLLYSRPGQRIESYTDLNGKRIAVVKNDVYCNTFIRMLQQFNIRCDLVYADNF 168

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++I         DA   +         +        I    I  SP++  +        +
Sbjct: 169 KDIFDMIDWGEVDAGVANR------FFSLLNERSFKIRATPIIFSPVSVQVAAPKGRNQD 222

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTT---NPDVQRFLGIDKSSNI 285
           +             L    +++  + KD     +  ++R+LGI+ +  +
Sbjct: 223 V-------------LSAFDRHLEAMKKDRDSVYHQSLKRWLGIEGAGYL 258


>gi|218658604|ref|ZP_03514534.1| ABC transporter, substrate binding protein (amino acid)
          [Rhizobium etli IE4771]
          Length = 70

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%)

Query: 2  YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +    +I  +     ++   NA  L DI  RG ++ G+ TG      V   G+  G+DV
Sbjct: 7  IRTALAAIGIVAAGLASAVEANAVTLNDIISRGTVRIGVLTGAPPMGMVDEKGNPTGYDV 66

Query: 62 DFCR 65
          D   
Sbjct: 67 DVAN 70


>gi|49474868|ref|YP_032909.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           henselae str. Houston-1]
 gi|49237673|emb|CAF26859.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           henselae str. Houston-1]
          Length = 289

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 73/220 (33%), Gaps = 14/220 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  RA+ S +       +   +  ++    +++ 
Sbjct: 58  LRFVTTVDFPPFNFLDKTGHLAGYNIDLLRAICSKLNLKKL-CEVEVVPWEKLIDHVKNG 116

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQAG 153
             +++      T+  +    L F          F+  +          +L+  +  + + 
Sbjct: 117 NAEVIIAGLKETI--KTHQDLVFTGSYLRFPARFVASRFMNFDEPISDKLTHLNSGILSE 174

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS- 212
           +  E     YF     +     F+   E+  A + H+ D    D  AL            
Sbjct: 175 SAHEKLFRSYFPEAKWQG----FKNRAELYKALQDHKIDLIFDDGFALSLWLNDPKSADC 230

Query: 213 EHVILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248
            + +    ++   L      A+ + + +  +I+++   ++
Sbjct: 231 CYFVGGAYMAPQLLGRGMQLAVAKKNEQLVDILNYALKSL 270


>gi|258623475|ref|ZP_05718478.1| extracellular solute-binding protein, family 3/GGDEF domain protein
           [Vibrio mimicus VM573]
 gi|258584290|gb|EEW09036.1| extracellular solute-binding protein, family 3/GGDEF domain protein
           [Vibrio mimicus VM573]
          Length = 463

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 76/257 (29%), Gaps = 16/257 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                + + C  +      +              L    +     ++ +   G   G  +
Sbjct: 10  KLSLMLLVFCSFLFSSVVNAAEQQ---------KLIIANSKAWKPYSYIDDQGKPSGILI 60

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF  A       +   I++  ++  +   A++  + D +      +  RE    L F   
Sbjct: 61  DFWLAFGQ---VNNVDIEFKLMDWNDSLEAVKYGKAD-IQAGLIRSPSREKY--LDFGEP 114

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                    +H++     + QL   ++ V  G        ++ + H        +   E 
Sbjct: 115 LLEIDTQLYVHQRFLGEKLGQLLAGNLDVAIGIVKGGFEQEFAQEHFPHIALTEYVNNEL 174

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  A      DA+  D        +  D   E +    + S   L PA+ + +    N +
Sbjct: 175 LMQAVNRGELDAFIADSQVANFYIVIADGAKEFMPAQFLYSAE-LRPAVAKDNMRLLNQI 233

Query: 242 SWTHYAMVTAEELGITQ 258
                 + T E+  I  
Sbjct: 234 DDGFTRLTTNEKNRILS 250


>gi|153815716|ref|ZP_01968384.1| hypothetical protein RUMTOR_01954 [Ruminococcus torques ATCC 27756]
 gi|317501900|ref|ZP_07960084.1| extracellular solute-binding protein [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088285|ref|ZP_08337204.1| hypothetical protein HMPREF1025_00787 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846957|gb|EDK23875.1| hypothetical protein RUMTOR_01954 [Ruminococcus torques ATCC 27756]
 gi|316896580|gb|EFV18667.1| extracellular solute-binding protein [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330408529|gb|EGG87995.1| hypothetical protein HMPREF1025_00787 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 296

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 22/194 (11%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +  ++ L + K +  L    N     F   K +  + G D++    L+  +  +   + 
Sbjct: 98  AAVESAKLDESKDQ--LVVATNAAFEPFEYTKGD-KYVGIDMELAALLAEKLGKE---LV 151

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              ++     L++   + DI          R+    + F    Y   Q  I+        
Sbjct: 152 IQNMDFDAVCLSVGQHKCDIAIAGLTVNDERKQY--VTFSDTYYQASQRLIVPSDDDTFD 209

Query: 140 VSQLSG------------ASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAA 185
             + +               I VQ GTT +  +   + F    +      ++        
Sbjct: 210 DLKDADAVAAKLGELKKEDKIGVQQGTTAQSYIEGDEAFGFEGLPATCQPYKSGSLAVQD 269

Query: 186 YRAHRCDAYTGDIS 199
                      D +
Sbjct: 270 MLNGNIKYVIIDAA 283


>gi|262173736|ref|ZP_06041413.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio mimicus MB-451]
 gi|261891094|gb|EEY37081.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio mimicus MB-451]
          Length = 461

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 76/257 (29%), Gaps = 16/257 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                + + C  +      +              L    +     ++ +   G   G  +
Sbjct: 8   KLSLMLLVFCSFLFSSVVNAAEQQ---------KLIIANSKAWKPYSYIDDQGKPSGILI 58

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DF  A       +   I++  ++  +   A++  + D +      +  RE    L F   
Sbjct: 59  DFWLAFGQ---VNNVDIEFKLMDWNDSLEAVKYGKAD-IQAGLIRSPSREKY--LDFGEP 112

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                    +H++     + QL   ++ V  G        ++ + H        +   E 
Sbjct: 113 LLEIDTQLYVHQRFLGEKLGQLLAGNLDVAIGIVKGGFEQEFAQEHFPHIALTEYVNNEL 172

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  A      DA+  D        +  D   E +    + S   L PA+ + +    N +
Sbjct: 173 LMQAVNRGELDAFIADSQVANFYIVIADGAKEFMPAQFLYSAE-LRPAVAKDNMRLLNQI 231

Query: 242 SWTHYAMVTAEELGITQ 258
                 + T E+  I  
Sbjct: 232 DEGFTRLTTNEKNRILS 248


>gi|322420344|ref|YP_004199567.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. M18]
 gi|320126731|gb|ADW14291.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. M18]
          Length = 872

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 71/261 (27%), Gaps = 21/261 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDI----------KKRGFLKCGINTGLVGFAEVKA 52
           +    +IL L+ +  +  S        +          ++   +K   +           
Sbjct: 5   RIVVTAILLLVTMSGSHVSGAVQPEASVYLTAEEQQWLRRHPVIKLAPDPDFKPIEFFDD 64

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+++G   D  R L   +    + +     N  E  +  +S+++D+L      T  RE 
Sbjct: 65  KGEYRGASADIIRLLEQKLGIAITVV--RLQNWDEVMMKFKSREVDLL-GAMVRTPNRER 121

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
                F         G         + +++ L    + V +       L + F       
Sbjct: 122 F--ALFTDTLVTVPGGIFSRSGSRTNLTLNDLKEKKVAVVSNYAAHDILKNRFPE----I 175

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
              +   V    A       D Y  +  A           +   +             I 
Sbjct: 176 RLEIVPDVSTALAKTSLGMVDFYV-ENMANATFYAQEAGITNLQLAGKTDFDYRWGMGIR 234

Query: 232 QGDTEWYNIVSWTHYAMVTAE 252
           +   E   I++    A+   E
Sbjct: 235 KDWPELQGILNKGLAAIDQEE 255


>gi|308270675|emb|CBX27286.1| hypothetical protein N47_I07060 [uncultured Desulfobacterium sp.]
          Length = 701

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 12/191 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K G+            +G   G  +D    ++    ++  ++QY+     E    L  
Sbjct: 40  VVKVGVYENAPKI-FTSESGKPAGIFIDIIEHIAK---NEGWRLQYVSGAWGEGLYRLAK 95

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +ID L  +  +T  R+        P+           K  GI S+  L G  I V   +
Sbjct: 96  GEID-LMPDVAYTAGRDRIFSFHKTPV-MSSWFQVYARKGSGIKSILDLGGKRIAVLERS 153

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
             +           +K   I     + I       + DA   +               + 
Sbjct: 154 VQQEAFVRLADGFGVKITLISVPDYKTIFEMVAGGKADAAVTNC------FYGMMHAKDF 207

Query: 215 VILPDIISKSP 225
            +    +   P
Sbjct: 208 GLEDTSVIFEP 218


>gi|300310494|ref|YP_003774586.1| amino acid ABC transporter/signal transduction system periplasmic
           protein/domain-containing protein [Herbaspirillum
           seropedicae SmR1]
 gi|300073279|gb|ADJ62678.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 258

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 64/215 (29%), Gaps = 17/215 (7%)

Query: 37  KCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
             G  +  V F  +       +G  VD   A+ +        +            +L   
Sbjct: 36  NVGATSTGVPFTFLDIKTNKLQGMMVDTVTAVGNKAG---FSVNIQQTPFAALIPSLTGN 92

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAG 153
           +IDI++     T  R  +  + F    Y  G+G  ++ +      ++  L G  +  Q G
Sbjct: 93  KIDIIAAAMLKTEAR--AQIVDFSDPVYSYGEGLFVNAQDGKSYKNLDDLKGEIVGAQVG 150

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           T     L               ++ V ++       R  A  GD   +         P  
Sbjct: 151 TVFVDALN----KKGGFKEVKTYDSVADMMRDVALGRIKAGFGDRPIVAYQLAQGANPQ- 205

Query: 214 HVILPDIISKSPLA---PAIIQGDTEWYNIVSWTH 245
            V L      + +      I +GD +    ++   
Sbjct: 206 -VRLVKEYQPTLMGDVCLVIRKGDPKLMERLNKAI 239


>gi|326382189|ref|ZP_08203881.1| ABC transporter substrate-binding protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326198919|gb|EGD56101.1| ABC transporter substrate-binding protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 297

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 56/187 (29%), Gaps = 7/187 (3%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + + L D+K  G +          ++    +G+  G  +   R +   +     K   + 
Sbjct: 38  SETTLQDLKDAGVVTVAY-ANEAPYSF-DKDGELTGGTIALHREVFKRLGVPELKG--VK 93

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +       L +K+ D++S     T  R      +F           ++        ++ 
Sbjct: 94  TDWGGLIPGLNAKRYDLVSAGMSITPAR--CEQASFSVPEINYTTALMVPPGNPKH-LTD 150

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           +                +   + +     +P++ +  +    A  + R DA+     +L 
Sbjct: 151 MDSIKRTGAKMAAMTGAIEADYASELDIANPMLVKDQQSGIDAVNSGRVDAFALTAVSLN 210

Query: 203 ALKLTND 209
             K    
Sbjct: 211 YAKTHTP 217


>gi|329999715|ref|ZP_08303490.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
 gi|328538246|gb|EGF64392.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella
           sp. MS 92-3]
          Length = 297

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 85/301 (28%), Gaps = 37/301 (12%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDI------KKRGFLKCGINT 42
           M +     +L    +   +             + +   +  I       + G L   I+ 
Sbjct: 1   MNRALMTLVLSAFAMSAYAALDLRANEQPLPVTRDPQAIAKIPPGYRFVEPGTLTVAISA 60

Query: 43  -GLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 A + ++     G D D  R L+ ++     K++ +P   ++  L + S + D+ 
Sbjct: 61  LNSPPLALLASDNRTRIGSDPDIARLLAGSLG---LKLRLVPTAWEDWPLGIASGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N   T  R+      F      D   F +     I   +  + L+G  + V +GT  E
Sbjct: 118 LINIAVTEKRKE--KFDFA-TYRVDSLAFSVKSTSDIAAVNGPADLAGRKVIVGSGTNQE 174

Query: 158 LTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             L     D   A   +  P+        +   ++ R D + G  S        N +   
Sbjct: 175 RILLGWNEDNRAAGRPQAQPVYLTDDASGNLYIQSGRADIFFGPQSVAAYKAALNGQTRV 234

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             + P             +        +       +   E         +  +      V
Sbjct: 235 VGLGPKKAWV----ATTTKKGNGLVYALQAALDGAIARGEYQQVLARWGEQGEAVAQSVV 290

Query: 274 Q 274
            
Sbjct: 291 N 291


>gi|330809497|ref|YP_004353959.1| hypothetical protein PSEBR_a2662 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377605|gb|AEA68955.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 291

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 77/272 (28%), Gaps = 31/272 (11%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F  ++C ++L+  +          +   G LK  +      ++    +G  +G DV+ 
Sbjct: 2   RLFAWVMCSLLLWGQAVQAQVRSYDQMIAAGELKVAVYKDFAPYSFED-HGQPRGVDVEL 60

Query: 64  CRALSSAIFD-------------DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            +AL+ A+               D     Y+  ++      L    + +   +       
Sbjct: 61  AQALAKALGVRLQLMWAPPGEKLDDDLRDYIWRSSPLHDRQLADLMMRVPYDHDYVQRRN 120

Query: 111 E------ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
           +        + +            F   +   + SV+      I V+  +     L   F
Sbjct: 121 DIGELANAQVVMFGPYQQECWQVAFDRRRLDSVGSVAVFQQHPIGVEVDSVPSFYLTSVF 180

Query: 165 KAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS------EHVIL 217
             + M       +  V +   A +A   DA       +         P        +  +
Sbjct: 181 --NGMLSAKTHHYPGVSQAFKAMQAGEVDAVMAMRGEVDWQVHEAADPQLALAENAYPNM 238

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                +  +  A+ + + +    V      ++
Sbjct: 239 GKQRWE--IGMAVHESNRQLAYAVEEALEGLI 268


>gi|288934311|ref|YP_003438370.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|288889040|gb|ADC57358.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 280

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 58/203 (28%), Gaps = 12/203 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       ++  + L     +  A  +        ++  +N     F+ V  N +  G+D
Sbjct: 1   MKNKIL--LVSALTLAMGINAAQA--VEKSPHAKTIEVVVNANGFPFSFVDDNNNITGYD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  + +      D +   +  ++     + L +    + + +   T  R      +  P
Sbjct: 57  GDLLK-VLDQRLTDYTF-HFNAVSRDAMIVGLSTGAYTLAADHFYLTKERAEKYDHSGEP 114

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGAS------ICVQAGTTTELTLADYFKAHNMKYHPI 174
               D +  + + +  I  +  L+             A  T             +   P 
Sbjct: 115 TGISDLRLIVRNDENDIHQLGDLASGKKKLVPIHTSDARYTVIENYNKKHPGQQINLQPN 174

Query: 175 VFERVEEIDAAYRAHRCDAYTGD 197
             +   +I  A  +   DA    
Sbjct: 175 GEQSAADIFKAVASGEYDAAIYP 197


>gi|241666826|ref|YP_002984910.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862283|gb|ACS59948.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 280

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 63/239 (26%), Gaps = 33/239 (13%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +      +    A+G   GF+ +  + L         +   +  +      AL + +
Sbjct: 30  TITLEGAYAPWNLTNADGTLGGFEPELAKVLCERA---KIECTLVASDWDGMIPALNAGK 86

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---------------- 140
            D++      T  R+  +G  F          F   K   ++                  
Sbjct: 87  FDVIMDALSITEERKQVIG--FTIPYAATPAAFATAKDSPLAKAAGTGATIKMTPGQTGV 144

Query: 141 -------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                  +   G +I +QA T     + D F           ++   + D   +  R D 
Sbjct: 145 KEIDALKAAFKGKTIGIQAATVYAKFVYDNF---GDIAEIREYKTGADRDLDLQNGRIDL 201

Query: 194 YTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D           +   +     +   I        + + DT+  +  +    + + 
Sbjct: 202 GFDDAVYFANAFKAANDTLDFTGPEIVGSIWGEGEGLGVRKADTDLRDKFNEAIKSTLA 260


>gi|290509329|ref|ZP_06548700.1| ABC transporter, substrate binding protein [Klebsiella sp. 1_1_55]
 gi|289778723|gb|EFD86720.1| ABC transporter, substrate binding protein [Klebsiella sp. 1_1_55]
          Length = 297

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 89/301 (29%), Gaps = 37/301 (12%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDI------KKRGFLKCGINT 42
           M +     +L    +   +             + +   +  I       + G L   I+ 
Sbjct: 1   MNRALMTLVLSAFAMSAHAALDLRANEQPLPVTRDPQAIAKIPPGYRFVEPGTLTVAISA 60

Query: 43  -GLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 A + ++     G D D  R L+ ++     K++ +P   ++  L + S + D+ 
Sbjct: 61  LNSPPLALLASDNRTRIGSDPDMARLLAGSLG---LKLRLVPTAWEDWPLGIASGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N   T  R+      F      D   F +     I   +  + L+G  + V +GT  E
Sbjct: 118 LINIAVTEKRKE--KFDFA-TYRVDSLAFSVKSTSDIAAVNGPADLAGRKVIVGSGTNQE 174

Query: 158 LTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             L     D   A   +  P+        +   ++ R D + G  S        N +   
Sbjct: 175 RILLGWNEDNRAAGRPQAQPVYLTDDASGNLYIQSGRADIFFGPQSVAAYKAALNGQTRV 234

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             + P        A    +G+   + +        +   E         +  +      V
Sbjct: 235 VGLGPKKAWV---ATTTKKGNGLVFAL-QAALDGAIARGEYQQVLARWGEQGEAVAQSVV 290

Query: 274 Q 274
            
Sbjct: 291 N 291


>gi|295103585|emb|CBL01129.1| Signal transduction histidine kinase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 1079

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 16/194 (8%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                   A           ++ G       F  V   G  KG+  +    LS       
Sbjct: 25  AVLPVKAAAET----ASAKVVRVGSFEDT--FNYVNEKGARKGYGYELLETLS---GYAG 75

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM---- 131
            + +Y+  +  + F  L++ +IDI+      +   + +  + F        + ++     
Sbjct: 76  WQFEYVTCDWSDCFEKLKNGEIDIIGG---ISYTEDRTQEMLFSDEPMGVEKYYLYADLS 132

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                 S    L+G  I V  GT  E+ LA++ + + +K   +     E++      H  
Sbjct: 133 RADISASDFKTLNGKKIGVLMGTEPEVMLAEWEEKYGLKTEHVNISNNEDVKQKLANHEI 192

Query: 192 DAYTGDISALYALK 205
           D +     + +A +
Sbjct: 193 DCFVSLEESFWAER 206


>gi|171321278|ref|ZP_02910242.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
 gi|171093450|gb|EDT38629.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MEX-5]
          Length = 327

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 62/233 (26%), Gaps = 20/233 (8%)

Query: 24  ASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A     I  RG L   +       F     NG   G D+D    L+  +       +   
Sbjct: 86  APEFARIVTRGTLVVAVLGVDQPPF-FRSRNGALAGVDIDLADELAKKLGVAVQFDRDAR 144

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI----- 137
               +    L + Q D+       TL R   +   F        +  ++++         
Sbjct: 145 -TFDDVVHLLATGQADVAISKLSRTLPRAQVIR--FSTPYISLRRALLINRVSFAELAKG 201

Query: 138 ----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 V    G +I V AG+     + + F A        ++        A  A    A
Sbjct: 202 RPLPEVVRDYRG-TIGVAAGSAYADYVRNDFPAA----RVRIYPDWPAALDALNAGAVSA 256

Query: 194 YTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
              D  A+  +   +   P    +         +A  +          V+   
Sbjct: 257 VYRDELAIKLMMQDSPTAPIRLRVATFDDLTDAIAVGVPVSAPTLLAFVNQFL 309


>gi|152978440|ref|YP_001344069.1| lytic transglycosylase catalytic [Actinobacillus succinogenes 130Z]
 gi|215275587|sp|A6VMD7|MLTF_ACTSZ RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|150840163|gb|ABR74134.1| Lytic transglycosylase catalytic [Actinobacillus succinogenes 130Z]
          Length = 483

 Score = 69.0 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 27/252 (10%)

Query: 1   MYKDFFVSILCLIILFFTS---------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M        + L +L +             + A+    I++RG L  G     V +  + 
Sbjct: 1   MKGLVIRISVALALLLWAVDMVFPWQQIIRSEANHYEAIQERGTLVVGTINNSVSY-FID 59

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            NG+  G + D  ++ +  +  +         +A   F ALQ+ +IDI + N      + 
Sbjct: 60  PNGNPAGLEYDLSKSFADYLGVELEIKSLDNSDA--LFDALQNNKIDIAAANLL--HQQR 115

Query: 112 ISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN 168
                 F P         +  K K    S++QLS     V   +   L +  A   K   
Sbjct: 116 YQKQFQFGPAYTSASWQLVYRKGKDKPRSLTQLSAKDKLVITQSEELLNILSAQQKKQPT 175

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGD----------ISALYALKLTNDRPSEHVILP 218
           + +        E +       + D    +             +       D    H  LP
Sbjct: 176 LSWQINSLLSQEALLLQVAEGKIDYTIANSIDVSAAQQIKPEIAVAFDITDEADVHWYLP 235

Query: 219 DIISKSPLAPAI 230
                   A  +
Sbjct: 236 SSSYSELQAALL 247


>gi|319782218|ref|YP_004141694.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168106|gb|ADV11644.1| ectoine/hydroxyectoine ABC transporter solute-binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 283

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 80/261 (30%), Gaps = 9/261 (3%)

Query: 1   MYKDFFVS-----ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K   ++      L  ++      S + S L  +K +GF +  I      +  V A+G 
Sbjct: 1   MNKLGILAGVAGLALTAVLAASIPGSADDSKLEQLKAQGFARLAI-ANEPPYTAVAADGK 59

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
             G   D  R +   +    + +             LQ+ + D+++        R  ++ 
Sbjct: 60  VSGAAPDVAREIFKRLGV--ADVAASISEYGAMIPGLQAGRFDVVTAGLFMKPERCAAVA 117

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +   +   +         KG  S   ++  +                  A   +   IV
Sbjct: 118 YSEPVLCDAEAMLVKKGNPKGFKSYEDVAKDTTATIGAPGGGTEEKLALNAGVPRDRVIV 177

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234
               +      +  R DAY+  + ++  L    + P+  VI P   +       A  +GD
Sbjct: 178 VPDGQSGVKMLQDGRIDAYSLPVLSINDLVKKANDPNLEVIAPVQGAPVYCDGAAFKKGD 237

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
               +        M  + E  
Sbjct: 238 EALRDAFDVELAKMKKSGEFA 258


>gi|251788711|ref|YP_003003432.1| putative transglycosylase [Dickeya zeae Ech1591]
 gi|247537332|gb|ACT05953.1| Lytic transglycosylase catalytic [Dickeya zeae Ech1591]
          Length = 485

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 73/251 (29%), Gaps = 20/251 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +      F+ ++ L++           S     L  I  RG L+    T         
Sbjct: 1   MKRLTINYVFIGVIALLLTLALWPNIPWRSHQDVQLRQILSRGELRISTVTS--PLTYTL 58

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           +NG   G D +  +  +  +      +  +  N  + F  L +   D+L+    +   R 
Sbjct: 59  SNGSPSGLDYELAKRFADYLGVR--LVVSVRQNVDDLFSDLDNDNADLLAAGLIYNQER- 115

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK- 170
                   P  Y   Q  +        +        + V +G+    TL D       + 
Sbjct: 116 -LNRFQAGPSYYSVSQQLVYRMGSARPASLDKLQGKLTVLSGSAHAATLRDLKTEKYPQL 174

Query: 171 -YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            +         ++       + D YT   S    L        +  +  D+  + P+   
Sbjct: 175 SWEVATDVSELDLLKQVADGKLD-YTIADSINIGLMQRIH--PQLAVSFDLSDEEPVTWY 231

Query: 230 IIQGDTEWYNI 240
           + Q   +  + 
Sbjct: 232 MRQNRDDSLSA 242


>gi|254285167|ref|ZP_04960133.1| GGDEF family protein [Vibrio cholerae AM-19226]
 gi|150425170|gb|EDN16947.1| GGDEF family protein [Vibrio cholerae AM-19226]
          Length = 469

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 16  KLFLLLMIAWPLLFGSMSEA--------VERQTLTIASSKAWKPYSYLDEQGQPSGILID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   IQ+  ++  +   A++  + D+ +              L F    
Sbjct: 68  FWLAFGEANHVD---IQFQLMDWNDSLEAVKLGKSDVQAGLI---RSPSRLAYLDFAEPL 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   ++ V  G        ++ +    +   I +   E +
Sbjct: 122 LTIDTQLYVHRTLLGDKLDTLLSGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 182 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 240

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 241 Q-GFAQLSSNEKN 252


>gi|78486517|ref|YP_392442.1| PAS/PAC sensor hybrid histidine kinase [Thiomicrospira crunogena
           XCL-2]
 gi|78364803|gb|ABB42768.1| PAS/PAC sensor hybrid histidine kinase [Thiomicrospira crunogena
           XCL-2]
          Length = 1410

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 66/238 (27%), Gaps = 12/238 (5%)

Query: 20  FSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           FS  A  L       IK    +  G +     +    + G   G   D    +       
Sbjct: 18  FSAQALTLNSSEQQWIKDHPQITLGSDYNWPPYDFKDSAGKHNGISADILDRIRQITGLK 77

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
                 +     E+    +   +D L+         + +  L F         G  M  K
Sbjct: 78  IKVRSGVWSTILEQA---EQGTLDGLACAV---KTPDRAEHLYFTAPYTSMPLGIFMQDK 131

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
              +S+  +   +         +  + ++ K +       +     E   A    + + Y
Sbjct: 132 STSTSIKTMDDLTTQTVTIN-RDSYMHEWLKQNYPHLKLYLVNSNAEALEAVSFGKANVY 190

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            G+++    L   N   +   +      K+  A AI +     + I+      +   E
Sbjct: 191 IGNMAVATYLIKKNYLTNIQAVAKINHFKTDTAIAIHKDKPILFGIIKKALKEISQKE 248



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 12/226 (5%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IK    +K         F  V A+  ++G   D+   ++               + ++  
Sbjct: 275 IKAHPVIKVAGEPDWAPFDFV-ADNTYQGIANDYLNLIAQKTG---LNFHIDIHSWEQNL 330

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L+ +Q+D+L          E +    F    Y     F +      SS++ L   +I 
Sbjct: 331 TLLKKQQVDVLPAAY---FSAERTSYAKFTTPYYKPLTYFFVRHDLKASSLNDLENTTIA 387

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           +  G      L   F         +  + + E   A   ++      + + L  +   + 
Sbjct: 388 MPKGYLHIDFLKQRFP----NITILETDTLNEAINAVIQNKAQVLYENYAVLSYILSQSG 443

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             +   + P   +   L   I     E  +I++    A +T +E  
Sbjct: 444 INTIKPLAPAKQANQSLHFMIRDSAPELASIMNKAL-ASITPQERK 488


>gi|222153537|ref|YP_002562714.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
 gi|222114350|emb|CAR43069.1| extracellular solute-binding protein [Streptococcus uberis 0140J]
          Length = 272

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 71/268 (26%), Gaps = 25/268 (9%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    K   ++ L  + L   S    AS       +  +  G ++    F     N    
Sbjct: 1   MKTFRKSIIIAALAFVSLISFSRVHAAS-------KEVIVVGTDSATKPFTYKDGN-KDT 52

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D++  + +         +++   +        + + +  I + +  ++  R  +    
Sbjct: 53  GYDIEVLKKVFK--GSKKYQLKIETVAFPSILSGIDAGRYQIAANDYGYSAER--AQKYL 108

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F                KG +S+  LSG      +G      L  + K H  K    +  
Sbjct: 109 FSKPISKSNYALATKGDKGFNSLDDLSGKKTQGMSGANYMQVLEKWNKEHPDKKPIDITY 168

Query: 178 -----RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPLA 227
                   +        + D    D  +L               L      D        
Sbjct: 169 ASGSTPFTQRLQMLENDQLDFLFYDAISLKTAIKDQGYDLTITKLTEKVGDDKDGLEYFI 228

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A      E    V+     +  + EL 
Sbjct: 229 FADDAKGKELQGFVNKKLLQLKKSGELK 256


>gi|77918139|ref|YP_355954.1| periplasmic binding transport protein/transglycosylase [Pelobacter
           carbinolicus DSM 2380]
 gi|77544222|gb|ABA87784.1| periplasmic binding transport protein/transglycosylase [Pelobacter
           carbinolicus DSM 2380]
          Length = 497

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 84/291 (28%), Gaps = 47/291 (16%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASI------LGDIKKRGF---LKCG------INT 42
           M K    + + +   +IL F    +          L  + ++G    +  G         
Sbjct: 8   MKKKQVVWLLCLGLAVILSFFGVYSLQDSPLRKKDLNAVSQKGKQHGISLGEHLSTSYRV 67

Query: 43  GLVGF---------------AEVKANGDWKGFDVDFCRALSSAIFDDPSK------IQYL 81
            L G                    ANG   GF+ +  +     +  + S        +++
Sbjct: 68  DLPGLIEKRYIRVLTTLNRTNFYVANGQPVGFEYELLKGYEKFLNTNISDKNLQIVFEFI 127

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           P++  E    L     DI +     T  R   +      +           K   + +V+
Sbjct: 128 PVDRDELIPKLIQGYGDIAAAGLTITPQRNKQVNFTDPYLRGVAEVVVGRKKDTPLETVA 187

Query: 142 QLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERV---EEIDAAYRAHRCDAY 194
            LSG  + V+  ++   +L     ++ +      + +        E+I     A      
Sbjct: 188 DLSGRKVAVRQSSSYFQSLKRLNQEFSRQGLDPVNIVTLSEDLETEDILEMVNAGSLPLT 247

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             D     A K      + +  +        +A  + +G+ +    ++   
Sbjct: 248 VADSHIAAAWKEVLPSLAVYDDIKLREGGD-IAWMVRKGNPKLKKSLNRFL 297


>gi|241663679|ref|YP_002982039.1| family 3 extracellular solute-binding protein [Ralstonia pickettii
           12D]
 gi|240865706|gb|ACS63367.1| extracellular solute-binding protein family 3 [Ralstonia pickettii
           12D]
          Length = 293

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 77/259 (29%), Gaps = 22/259 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +  +    +A  +  I++ G LK  +  GL  F+     G   G DV    AL   +   
Sbjct: 26  MVGSVAPAHAD-MEKIRQSGALKVALYKGLPPFS-ENVGGQLSGIDVALANALGKQMGLS 83

Query: 75  PSKIQYLPLNAKERFL---ALQSKQI-------DILSRNTDWTLLREISLGLAFRPITYF 124
            S + +              +             +L    D   +R+    L F P    
Sbjct: 84  ASLLPFDADEDGMSGDLRNMVWKGHYLGYGPADVMLHVPVDPNFIRQNGQVLIFAP-YLR 142

Query: 125 DGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           +    +        +SS   L+G +   + G+     L        ++    ++    E 
Sbjct: 143 EAYVLVYDSDRVGKVSSFEDLAGQATGAEQGSGGASALLAGAN-GGLRDKVKIYPEANEA 201

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS------PLAPAIIQGDTE 236
             A  + +  A     +       T  +P+   +  ++ S         +  A+     E
Sbjct: 202 LRALFSGQIAAAMVTRAQYENALKTQSQPATRFVATELQSPLLPPRGWAIGMAVKADQRE 261

Query: 237 WYNIVSWTHYAMVTAEELG 255
               +     A+  + EL 
Sbjct: 262 LAQALESALNALRASGELQ 280


>gi|153830787|ref|ZP_01983454.1| transglycosylase, Slt family [Vibrio cholerae 623-39]
 gi|148873743|gb|EDL71878.1| transglycosylase, Slt family [Vibrio cholerae 623-39]
          Length = 482

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 67/227 (29%), Gaps = 21/227 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 33  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 90

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           +   F AL++ ++DI++     +  R            Y   Q           S  QL 
Sbjct: 91  S--LFPALKNGEVDIIAAGLSQSEERLKDFRAG-PAYYYVSQQVVYKKGDWRPRSFKQLV 147

Query: 145 GAS------------ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRC 191
                            V   +  E TL    K + + ++H      V ++         
Sbjct: 148 ERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQKKYPDFQFHVDSNSDVNDLLKKVSQGEL 207

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +T   S   +L        E     ++    P++  I + D E  
Sbjct: 208 -LFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDDESL 251


>gi|218662078|ref|ZP_03518008.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli IE4771]
          Length = 231

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 47/177 (26%), Gaps = 11/177 (6%)

Query: 34  GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
             +             V    G   G++ D    ++  +     K++Y   +      A+
Sbjct: 19  KSVVVVTENAYPPLQFVDPKSGKAIGWEYDAMNEIAKRL---NFKVEYQNTSWDAMIQAV 75

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKKKGISSVSQLSGASI 148
              Q +     T  T+  +    + F        Q  +      +     S +  +   I
Sbjct: 76  SDGQYN--IGMTGITIKDDRKQKVDFSDPYMRSQQFMLVRGDEKRFTDAKSFAAFNDGLI 133

Query: 149 CVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
             Q GT+     + +    +       +FE       A +    D    D  A    
Sbjct: 134 GAQPGTSPFYTAVYEILDGNEQNPRIKLFETFGATVQALKTGDVDLVLTDSVAAKGY 190


>gi|113970235|ref|YP_734028.1| diguanylate cyclase [Shewanella sp. MR-4]
 gi|113884919|gb|ABI38971.1| diguanylate cyclase [Shewanella sp. MR-4]
          Length = 937

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 10/185 (5%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +K G              G + G + D    L+  +  +   + +   + +    AL+
Sbjct: 500 GEVKLGYLKQWPPMEFNDDEGQFAGINSDVSHILAEQLQINLRPVAFD--DWQSLISALR 557

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQA 152
           S +I +           E    LAF    +    G +   ++  + +++QL+G  + V  
Sbjct: 558 SGEIALAG---SIAQTAERQQYLAFSDPYWPSPWGLVSQLEQVSVFNLAQLAGQRVAVVE 614

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G      L     A       ++ + ++   AA      D +   +  L +   T   P 
Sbjct: 615 G----YHLVAQLMALQPSLKLVLVQDIQSGLAAVNEGHADVFIDKVVTLASELKTGQYPL 670

Query: 213 EHVIL 217
             + L
Sbjct: 671 LKMSL 675



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 61/198 (30%), Gaps = 19/198 (9%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      + ILC  +L     ++             L   +      +  V  +G+  G 
Sbjct: 1   MKLVLQLIVILCCTLLSSAVNASQGQTES-------LIVVMGEDSFPYQFVDNDGEATGL 53

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
            VD  +          + + ++  +  E  + LQ  +  +       T  RE      F 
Sbjct: 54  LVDLWKEWGKRT---DTPLVFVARHWNESLVQLQQGKAQVHI-GMGQTPERE--QLFDFA 107

Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      +HK  +G  S+ +L    I + +G++ E  L               +E 
Sbjct: 108 QPIANVSTYLYLHKSLQGKKSIKELIPYQIGIVSGSSHEAELRRIEP----NLVFKYYES 163

Query: 179 VEEIDAAYRAHRCDAYTG 196
            E++ A   A     + G
Sbjct: 164 REKLLAGVAAGETVVFAG 181



 Score = 36.6 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 67/211 (31%), Gaps = 12/211 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +K G L   +  G+  F ++  +G   G  VD  +  S+    +   + ++P +      
Sbjct: 252 QKAG-LVVAMQLGVEPFVDLGVDGLPHGLYVDLWQLWSAKTGIN---VDFIPGDMNATVN 307

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
            ++    D       +    ++  GL      Y       +++ + ++ +  L G  I V
Sbjct: 308 DVRQGLADAHIG---YPESDDLKTGLTRAWQLYTVKSRLFLYQ-QQLTDLQSLKGKRIGV 363

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
                  + L               ++ ++ + A  R+     +    +      L N  
Sbjct: 364 VPTAPYLVALRKALP----DITLRYYDNMDNMVAGARSGEIVGFVAAGAWTSHYLLQNKA 419

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
            SE    P++   + +       D      +
Sbjct: 420 WSEFHQYPELEFPTDVYVLTRSDDPGLTQRI 450


>gi|95930172|ref|ZP_01312911.1| periplasmic sensor signal transduction histidine kinase
           [Desulfuromonas acetoxidans DSM 684]
 gi|95133866|gb|EAT15526.1| periplasmic sensor signal transduction histidine kinase
           [Desulfuromonas acetoxidans DSM 684]
          Length = 616

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 52/206 (25%), Gaps = 13/206 (6%)

Query: 6   FVSILCLIILFFTSFSTNASILGDI---KKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
               + L +    +    A  +        +  +  G       +  +  NG   GF+V+
Sbjct: 44  LTMAIILGVTLCATRLWAAPKIEYAGPFIDKPPVIIGGMQDFPPYEFLDKNGTPSGFNVE 103

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             RA++  +      ++    N      AL    ID L          E +  + F P  
Sbjct: 104 LTRAIARVM---EMNVEIQLGNWNVMRQALVHGDIDALQG---LNFSAERTKEVDFSPPH 157

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                           S          V    +    L      +N     I  +   E 
Sbjct: 158 SVVQYSIWSRSGTPKISQLSEIQEKTVVVLKGSISDELLQSAGINN----LIRADSYGEA 213

Query: 183 DAAYRAHRCDAYTGDISALYALKLTN 208
                + + D        + AL  T 
Sbjct: 214 LRLVASEKYDYLAAAKLPIQALSSTM 239


>gi|300172350|ref|YP_003771515.1| L-cystine-binding protein [Leuconostoc gasicomitatum LMG 18811]
 gi|299886728|emb|CBL90696.1| L-cystine-binding protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 275

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 78/243 (32%), Gaps = 12/243 (4%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             ++I+ ++    T  ST +S    I     +K G       FA +  +G   G D+   
Sbjct: 18  VIIAIIGVMFFRHTGTSTQSSSKVQI-----IKVGSGNDGQPFAYLDKDGKPAGMDIALL 72

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +A+   +     K +    +       L++ +  +     +    R+ +        T +
Sbjct: 73  QAIDKKL--PQYKFKLTLSDFPTMITNLKAGKTTMAMYQVEQNAERKENFKFGTVGYTVW 130

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EI 182
           D           + S +   G  + V   +T + TL D +   N   + +V       ++
Sbjct: 131 DTLLATKKSAGVLDSFADAKGKKLYV-TNSTNQATLTDAYLKKNADAYSVVRGTYTMEQV 189

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                + + + Y     ++  L       +  V    +   +       + D ++   V+
Sbjct: 190 AQGLNSGQFNVYPAPKYSIDLLNRQFK--TNLVYGKAVNHSNAYPLFNKKADPKFIKAVN 247

Query: 243 WTH 245
              
Sbjct: 248 KAM 250


>gi|255029492|ref|ZP_05301443.1| amino acid ABC transporter (binding protein) [Listeria
           monocytogenes LO28]
          Length = 163

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 2/129 (1%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G  T       +  NG   G+DV+  + +   +       ++  ++     ++L +
Sbjct: 36  TITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKF--KFKTMDFSNLLVSLGA 93

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            ++DI++   + +  RE            F  Q  ++     I+S   L+G  +   A +
Sbjct: 94  GKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATS 153

Query: 155 TTELTLADY 163
              L L   
Sbjct: 154 NGALVLEKN 162


>gi|170740955|ref|YP_001769610.1| arogenate dehydratase [Methylobacterium sp. 4-46]
 gi|168195229|gb|ACA17176.1| Arogenate dehydratase [Methylobacterium sp. 4-46]
          Length = 256

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 67/234 (28%), Gaps = 6/234 (2%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I++ G L+ G+      ++  ++ GD KG DV   R L+ ++      ++ +P   K   
Sbjct: 29  IREAGVLRVGLTGDYAPYSLRRSEGDVKGADVTMARDLARSLG---VSLEIVPTTWKGLK 85

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L + + DI       T  R      +   +T               +S++ +    + 
Sbjct: 86  DDLLADRFDIAMGGVSVTSDRAAVADFSVPVMTDGKRPIVRCADAGTYTSIAAIDRPEVR 145

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V            +  AH       +      I       R D    D + +      + 
Sbjct: 146 VVVNPGGTN--ERFAAAHFPHAAVRLHPDNRTIFEEVAEGRADLMVTDGAEVDYQARRHR 203

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
                  + D    +     +   D      V     A + +       +   +
Sbjct: 204 GVLCPATVADSFDHADKGYWM-SRDPALKAAVDGWLKAALASGAYDRALEAAAE 256


>gi|13473619|ref|NP_105187.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
 gi|14024369|dbj|BAB50973.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Mesorhizobium loti MAFF303099]
          Length = 265

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 65/234 (27%), Gaps = 15/234 (6%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79
           +  A  L D+  R  +             +    G   G++ D    ++  +     K++
Sbjct: 20  AAFAQALPDLGGRQVVVV-TENAYPPLQFIDPKTGKQIGWEYDAMNEIAKRL---NFKVE 75

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKK 135
           Y   +      A+  KQ +     T  T+  +    + F        Q  ++     +  
Sbjct: 76  YQNTSWDAMIQAVSDKQYN--IGMTGITIKDDRKEKVDFSDPYMRSEQFMLVRGDESRFT 133

Query: 136 GISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
              +        I  Q GTT     +      +       +FE       A ++   D  
Sbjct: 134 DAKTFGAFKDGLIGAQPGTTPFYTAVYSVLDGNEQNPRIKLFETFGATVQALKSGDVDVV 193

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             D          +    +  ++   +          +G ++    V+    A+
Sbjct: 194 LTD--GTAGKGYVDASGGKLKLIGGPLGTEDFGFIFPKG-SDLVKPVNAAIAAL 244


>gi|307132101|ref|YP_003884117.1| lytic transglycosylase [Dickeya dadantii 3937]
 gi|306529630|gb|ADM99560.1| lytic transglycosylase [Dickeya dadantii 3937]
          Length = 485

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 75/251 (29%), Gaps = 20/251 (7%)

Query: 1   MYKD----FFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +      F+ ++ L++           S     L  I  RG L+    T         
Sbjct: 1   MKRLTINYVFIGVIALLLTLALWPNIPWRSHQDVQLRQILSRGELRISTVTS--PLTYTL 58

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           +NG   G D +  +  +  +      +  +  N  + F  L +   D+L+    +   RE
Sbjct: 59  SNGSPTGLDYELAKRFADYLGVR--LVVSVRQNVDDLFGDLDNDNADLLAAGLIYN--RE 114

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK- 170
                   P  Y   Q  +        S        + V +G+    TL D+      + 
Sbjct: 115 RLSRFRAGPSYYSVSQQLVYRMGTARPSALDKLQGKLAVLSGSAHAATLRDFKAGKYPQL 174

Query: 171 -YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
            +         ++       + D YT   S    L        +  +  D+  + P+   
Sbjct: 175 SWEVATDLSELDLLKQVAEGKLD-YTIADSINIGLMQRIH--PQLAVSFDLSDEEPVTWY 231

Query: 230 IIQGDTEWYNI 240
           + Q   +  + 
Sbjct: 232 MRQNHDDSLSA 242


>gi|229816738|ref|ZP_04447024.1| hypothetical protein COLINT_03785 [Collinsella intestinalis DSM
           13280]
 gi|229807714|gb|EEP43530.1| hypothetical protein COLINT_03785 [Collinsella intestinalis DSM
           13280]
          Length = 319

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 71/259 (27%), Gaps = 34/259 (13%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIK--------------KRGFLKCGINTGLVGFAEVK 51
            V+  C + +  +  S       +++              + G L   ++      A   
Sbjct: 16  LVAFACAMAMSLSGCSLTTPTRAEVEPEPVKATLGADDLIEDGVLTVAMDMTDAPQAMTD 75

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
             G   G+  D  R L+  +  D        +++ +   +L   + D+          R 
Sbjct: 76  HEGKPSGYYADIARLLAERMGLD-----LRVVSSADVTGSLSKGKADLYIGA------RT 124

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK-----GISSVSQLSGASICVQAGTTTELTLADYFKA 166
              G+    +   +                  S + L GA + VQ+ +       D   +
Sbjct: 125 GEDGVVESGVLVQNASSIFAKSADGSREVPTVSATTLQGAVVAVQSDS----AAQDAMDS 180

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
             +         V E   A  A   D    D +A   L            +  ++S   +
Sbjct: 181 AGIDTTLKTKSNVNECFEALAAGEVDYVACDSTAGAYLARAYPGTVFVGTIAPMVSYDAI 240

Query: 227 APAIIQGDTEWYNIVSWTH 245
           A +      +   I+    
Sbjct: 241 AASGTDLADQAMGILEDAL 259


>gi|22298611|ref|NP_681858.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Thermosynechococcus elongatus BP-1]
 gi|22294791|dbj|BAC08620.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Thermosynechococcus elongatus BP-1]
          Length = 306

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 70/230 (30%), Gaps = 16/230 (6%)

Query: 30  IKKRGFLKCGIN-TGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           +   G L  G   TG   +     +      GF+V+   A++  +  +   +        
Sbjct: 53  VLNPGTLAWGAEATGGAPYVFYDPDDPSKLVGFEVEIADAIAQRMGVNAVAVA---SFYD 109

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK----GISSVSQ 142
           +    L + + D++    + T  RE      F    Y  GQ  ++          ++ S+
Sbjct: 110 QLSAGLAANRFDMILNGWEITSDRER--SQLFSQPYYRYGQQIVVRANDSRFEQYTATSE 167

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           ++ A++      T     A      + K     ++ +          R DA   D   + 
Sbjct: 168 VTLANLAGMTVGTGLGYKAQEILEQDPKIEARPYDDISAFFNNLVEGRIDAVMVDYPIVA 227

Query: 203 ALKLTNDRP----SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              L         +    +   I  +    A  + + +   + +    A+
Sbjct: 228 YYVLGVGPGGTVNNRLRPIGVPIFLNNYVIAFNKNNPQAKTLKAEVDQAL 277


>gi|330878515|gb|EGH12664.1| FliY [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 277

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 64/215 (29%), Gaps = 14/215 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +     + L     + ++S+    ++ G +  G +     +  +       GFD
Sbjct: 1   MKLSGLIVRPVALALLGAVVAMSSSVASAFQQPGKIIAGSDMTFFPYEYM-EKNRPAGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++F   L+  +      I             LQ  + DI + +   T  R   + +    
Sbjct: 60  IEFLDGLAKVMGMTAENID---TRFPNLIGGLQGGRFDITNSSMYITADRLKVIDMI--- 113

Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPI 174
                G+  +  K             G  I   A T+    L     +Y   + ++   I
Sbjct: 114 PYLKSGEAILAVKGSAYQPKVPEDFCGHKIGSMAATSWLQQLQKLSTEYCVKNGLQPIAI 173

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             +    +   A  AH  +A   D +    +    
Sbjct: 174 SEYGTDPQTTQAMLAHAVEAQITDAAVARGVVDKL 208


>gi|291521933|emb|CBK80226.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 298

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 59/193 (30%), Gaps = 22/193 (11%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  ++ L   K +  L    N     F   K +  + G D++  + L+  +  +   +  
Sbjct: 101 AVESAELDSSKDQ--LVVATNAAFEPFEYTKGD-QYYGIDMEIAKLLADELGKE---LVI 154

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             ++     L++  ++ DI          R+    + F    Y   Q  I+         
Sbjct: 155 QNMDFDAVCLSVSQQKCDIAMAGLTINEERQEY--VTFTDSYYQASQRLIVPSADTTFDE 212

Query: 141 SQLSG------------ASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAY 186
            + +               I VQAGTT +  +   D +    +    + ++         
Sbjct: 213 CKTADEVAAKLGELSSSDKIGVQAGTTGQYYVEGSDDWGFPGLPAECVTYKSGSLAVQDM 272

Query: 187 RAHRCDAYTGDIS 199
                +    D +
Sbjct: 273 LNGNINYVIIDAA 285


>gi|268679547|ref|YP_003303978.1| PAS sensor protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268617578|gb|ACZ11943.1| PAS sensor protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 2035

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 79/234 (33%), Gaps = 16/234 (6%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IK+   +K         F  +   G   G  VD+   ++  +      + Y+    ++  
Sbjct: 525 IKEHPIIKVSNEPDFPPFDFM-KEGRAVGLGVDYMNFVAQKVG---LHVSYVQSTWEDLL 580

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
              ++ ++D+L      T  R+      F    + +     + K   I S+++L G  + 
Sbjct: 581 KQFEAGKMDVLQSVY-LTKKRQEY--AYFTTPFFTNYPAMAVRKGSSIKSLAELKGKKVA 637

Query: 150 VQA-GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISALYALKL 206
           +     T+E  L D       +  PI+   V E          D         +   ++ 
Sbjct: 638 LMRGYGTSEKLLRDI-----PEIKPIMCTNVYEALHLVSFGEADVAFDSVGTMSYAIMEQ 692

Query: 207 TNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
                S H I + D    S +  A+ +     Y+I+     AM   E + +  K
Sbjct: 693 MLTNLSIHKIDVSDKELSSDVHFAVKKEKAILYSILQKALDAMTPEEHIALRSK 746



 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 96/316 (30%), Gaps = 33/316 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58
           M   +   +LC+    F   +   S    +   G   +  G          V  +G   G
Sbjct: 1   MK--WLWIVLCVPFFLFGQEALVLSHQEKVWLNGQKEIYIGAMDDWAPINFVDYHGKASG 58

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
              +    ++        K++ +  + +E +   +  +ID +    D T   E      F
Sbjct: 59  IGSEI---VAELNKLLKGKLKIVSGSWEEIYTQAKEGKIDAI---MDITKKPEREAFFYF 112

Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      +  +      S+  L G  + ++    T   L   F           ++
Sbjct: 113 TKAYLNIPHVIVSRQDTPSFGSLESLYGKKVALEKNVGTIGYLRTNFP----FIEIQTYD 168

Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                  A      DAY G+ + + Y ++       +   L       PL+  + + +  
Sbjct: 169 TTSMALHALAMKEVDAYIGNRAVMSYKIEQEFLNSLKIDALERSRKSVPLSLGVPRSNPM 228

Query: 237 WYNIVSWTHYAM----------VTAEELGITQK-NINQVSKDTTNPDVQRFLGIDKSSNI 285
            ++I+  +  A+            + E  ++      + +      +++   G ++    
Sbjct: 229 LFSILEKSMEAIPRETWVKILSKWSNEKPLSLDLTSEERAYLKMKKELRFVAGNEEWKPF 288

Query: 286 ------GEALGLTKDW 295
                 G+  GL KD+
Sbjct: 289 SFLDKNGQMQGLEKDF 304



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 69/252 (27%), Gaps = 18/252 (7%)

Query: 31  KKRGFLK-CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           K +  L+    N     F+ +  NG  +G + DF +     + +    +    +      
Sbjct: 271 KMKKELRFVAGNEEWKPFSFLDKNGQMQGLEKDFLK-----LLESYLSVPI-YVTHLPWE 324

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
            AL+  +          +   +    L+F    Y      +             +   I 
Sbjct: 325 DALKQAKSHHFDGIISASPTPDRLEKLSFSHAYYISPLAVVTRHDNVRDINENFAQKRIA 384

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           V  G+   L + ++F         +  +   +        R      D        L   
Sbjct: 385 VMEGSAVVLHVKEHFPEAK----IVYTKEGTQGLITMLLKREAEGAIDTMLSLEYLLKEK 440

Query: 210 RPSEHVILPDIISKSPLA---PAIIQGDTEWYNIVSWTHYAMVTAEELGIT----QKNIN 262
                V +        L+    A+ + +    +I++    A    E   I      KN N
Sbjct: 441 SLDAQVEIGYSFYSEALSSFQYALRKDEPLLLSIINKAIDAYSLDERKNIKERWESKNGN 500

Query: 263 QVSKDTTNPDVQ 274
            +   +   + +
Sbjct: 501 GMKTVSLKGEQK 512



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 18/220 (8%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +   + +      G + G   D  + +   +     K+    L  ++  L  ++K++D++
Sbjct: 784 DPRYLPYEAFNKEGKYIGIVADLLQKMEKELGIHIEKVP--SLTWQDALLKAKNKEVDMI 841

Query: 101 SRNTDWTLLREISLGLAF--RPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTT 155
           S         +  L                 +  K K    ++S+ +L    I +    +
Sbjct: 842 SA-----YENDKILSETHLSTKPYVSSPLVIVTRKDKHKYFLNSLLELENQKIAIIKDYS 896

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               L    KA   K H +  E  ++      +   DA    +  L    L         
Sbjct: 897 YIQGL----KAAYPKLHYMEVENAKKGFEGVASGEYDAMVVSL-RLATYALHTMGLHNLH 951

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           ++        LA  + +       I++    A +  EEL 
Sbjct: 952 VIGKTDMNMHLAFNVKKEWEPLVGILNKAI-AAIPPEELQ 990


>gi|327396676|dbj|BAK14097.1| arginine-binding periplasmic protein 2 precursor ArtJ [Pantoea
           ananatis AJ13355]
          Length = 199

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 12/190 (6%)

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D    ++     D   + +  +       ++ + +ID++      T  RE    ++F   
Sbjct: 3   DVAAEVAKRQHLD---VNFTAVPFSTLIQSVIAGKIDMIVAGMTPTPEREK--RISFSQP 57

Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
               G G ++         S   L G  +    GT     L        +     V++  
Sbjct: 58  VTAFGPGLVVRDDNKKVYRSQQDLKGDIVGTMTGTDYTQALI----KSGIPKEVKVYDSP 113

Query: 180 EEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            ++       R  A   D   + Y  K    +    V        +P+A  + +G+ +  
Sbjct: 114 ADMMRDLSLGRIAAGMNDYPIMKYQEKSGAYKGMHVVDGYKPEHIAPMAFGVKKGNDKLL 173

Query: 239 NIVSWTHYAM 248
             ++    AM
Sbjct: 174 ADINTALTAM 183


>gi|224371656|ref|YP_002605820.1| Signal transduction histidine kinase [Desulfobacterium
           autotrophicum HRM2]
 gi|223694373|gb|ACN17656.1| Signal transduction histidine kinase [Desulfobacterium
           autotrophicum HRM2]
          Length = 842

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 80/262 (30%), Gaps = 18/262 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASIL------GDI---KKRGFLKCGINTGLVGFAEVKANG 54
               + L +  +FF   S +   +        I      G ++  +         +  NG
Sbjct: 7   SISAAFLTITAVFFFYPSVHEDSVPGMTVEEQIWLDSHSGKVRLVLTPDWPPMDFLDKNG 66

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +  G   D+   +   +    +++     +  E     +  +ID++S   + T  R   +
Sbjct: 67  NPAGMAADYIHLIEDKLKFRFARVP--VSSWDEMLSLAKKGEIDVISAGQE-TPARRTFM 123

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
             +  P         +   K    ++ ++ G  I V         + ++ + H+   + I
Sbjct: 124 NWS-TPFLNLKTTIIVQKGKYANLTLDRMQGMKIGVVRK----YAVGEFIREHHPDLNMI 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                +           DA   ++       +  ++ +   +  D   +      I +  
Sbjct: 179 DVADSKTGIEQVSFGELDAMITEVP-NALYIIETEKITNLSLAGDTGFELHHGMGIRKDW 237

Query: 235 TEWYNIVSWTHYAMVTAEELGI 256
           +    I+  T  ++   E   I
Sbjct: 238 SILSRIIEKTLVSISEEEHQAI 259


>gi|215275778|sp|Q4KHS7|MLTF_PSEF5 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
          Length = 486

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 70/240 (29%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            I+  + L   +     S L  +K+ G L+         +     NG+  GF+ +  +  
Sbjct: 15  LIVTGLFLMLGACVEKPSTLERVKEDGVLRVVTRNSPATY-FQDRNGE-TGFEYELVKRF 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +        L+     L      +   +         +    + F         
Sbjct: 73  ADDLGVELKIETADNLDDLFDQLGQPKGPVLAAAGLVS---SEQRKQQVRFSHPYLEVTP 129

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             I    +   ++   L G  I V  G+T    LA+    +  ++Y       V ++   
Sbjct: 130 QVIYRNGRSRPTTAQDLVGKHIMVLKGSTHAEQLAELKLKYPGIEYEESDAVEVVDLLRM 189

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + L   ++          L D  S+S         D    N ++   
Sbjct: 190 VDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGDARSQS--WAVAAGDDNSLLNEINSFL 247


>gi|296158408|ref|ZP_06841239.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
 gi|295891352|gb|EFG71139.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           Ch1-1]
          Length = 284

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 58/223 (26%), Gaps = 15/223 (6%)

Query: 30  IKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           I  +  L    +                +G +VD  + +  A+        Y        
Sbjct: 38  IMAKHGLAFCSDLSNPPADGTADDGSTPQGAEVDIMKEVGKAMGVPTRIDNYQ---FSGI 94

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGA 146
           F AL + + D++  +   T  R     L      +    G ++       ++    L G 
Sbjct: 95  FAALDTGKCDMVMASLGKTPERAQRYEL---VDYWRVASGLLVPAGNPRHLTKFEDLGGT 151

Query: 147 SICVQAGTTTELTLADYF----KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + V  G+     L         A       +               R DA+  D   + 
Sbjct: 152 RVAVLLGSRNASVLHQINEQIKAAGKPPIETVELNTNAAAYQDLALGRVDAFVSDTVNIN 211

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +  +       +    +       AI +G+ E    V    
Sbjct: 212 YYRSRSH--GRFEVGGVPVPPKTWTIAIPKGNVELKQAVQAAI 252


>gi|327193271|gb|EGE60177.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
           CNPAF512]
          Length = 276

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 79/256 (30%), Gaps = 25/256 (9%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              ++K G L+CG       +       G++ GF  D C+  +  +   P    ++    
Sbjct: 35  WQGVQKAGALRCGAAVA-PPYVMRDPATGEYTGFFADLCKEFADVLKVKPE---FVDTTW 90

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-----ISSV 140
                 LQ+ + D+   +         ++ + F             +K        ++SV
Sbjct: 91  DNIVAGLQAGKWDL---SLALNRTPARAMAVQFSIPAMEYQISLAYNKNNPKIAAGVASV 147

Query: 141 SQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + +   G ++ V +GT  +  ++   K        +     +E   A  + R D      
Sbjct: 148 ADIDKAGVTLAVMSGTAQDKAISAAVK----NATIMRLPGNDETRLAVTSKRADILVDAS 203

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
                   T   P   V L    + +    A      +            +   E  +  
Sbjct: 204 DTN--QLFTQSNPDWAVALNPTPALAKQGVAF-GLPHQLSAADVEVINIFL---EERVAT 257

Query: 259 KNINQVSKDTTNPDVQ 274
            +++++ +   +  ++
Sbjct: 258 GHVDELIRKAVDEVLK 273


>gi|222080876|ref|YP_002540239.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725555|gb|ACM28644.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 279

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 82/287 (28%), Gaps = 26/287 (9%)

Query: 5   FFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             +S +  ++L                   + G L   + T     + +  +G  KG D 
Sbjct: 10  LLLSGIAGMLLSAQITHAADCTPQHKFTTIEPGTLTVAV-TTYAPHSYLDDSGGMKGIDG 68

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D     +     +  K++ + ++       + S Q DI + +   T  R   + L+  P+
Sbjct: 69  DIAAEFAKR---ECLKVKAVAVDPAAAIQYVLSGQADITTGDWYRTAERAKVMSLS-APL 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                    ++ K+    VS L G  +    G      L     A        ++     
Sbjct: 125 Y---TDQMAIYSKQDFKKVSDLEGKKVGTVQGYLWVSDLKTLLGA-----SLKLYPNSVN 176

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +     A R D      S               V +     +      +           
Sbjct: 177 MQQDLFAGRIDVAVDGYSTGVVAAQKGALKDVKVAVATADPR------VKATKEAAQAGF 230

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS-SNIGE 287
            ++  A    E L     NI  + KD T   + +  G+D +    G 
Sbjct: 231 PYSLKAKEFGEALD---SNIEAMHKDGTIVKILKSYGLDGTAGETGA 274


>gi|213852457|ref|ZP_03381989.1| glutamate and aspartate transporter subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 109

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 3   KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++L + +    + +        S L  I K G +  G     V F+         
Sbjct: 4   RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           G+  D+  A+       +     +++ +P+ ++ R  A+  + +  
Sbjct: 64  GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRNSAVAKRNLRF 109


>gi|266619243|ref|ZP_06112178.1| putative GGDEF domain protein [Clostridium hathewayi DSM 13479]
 gi|288869238|gb|EFD01537.1| putative GGDEF domain protein [Clostridium hathewayi DSM 13479]
          Length = 822

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 81/249 (32%), Gaps = 15/249 (6%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             I +RG ++ G+  G         NG+ +G  ++  + +          + +   N +E
Sbjct: 274 EYISQRGTVRAGVMLGRAPLQYQAKNGEIRGISIEVLKYIEEQTGLSYEIVPFH--NWEE 331

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              A++   +D++          E++   +      +      +   + + +++ LSG  
Sbjct: 332 YSRAMEDGAVDLVVG---IAGDYEVTGAESCALTLSYLSVPLQLIMNENVKALTDLSGKK 388

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + +Q    TE +L               ++ VEE   A      D   G+  A+      
Sbjct: 389 LALQKSLLTEQSLQ---------GELHYYDNVEECMEAVHKGEADYCYGNSYAVQYYMAD 439

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
           ++  +                 I +  D    +I++    A+   +      +N      
Sbjct: 440 HNYKNLFTFAQSENWTQKYCFGIRRPVDITLLSIMNKVIRALPEEQVNRFLYQNAYDAGN 499

Query: 267 DTTNPDVQR 275
            T +  V R
Sbjct: 500 LTFSEYVMR 508



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 61/200 (30%), Gaps = 19/200 (9%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F  + CL++  FT+ +              ++ G      GF E+  +G + G+  ++ 
Sbjct: 13  LFTVLFCLLLFSFTARAAENG-------SRVVRVGYPVQQ-GFTEISEDGTYSGYTYEYL 64

Query: 65  RALSSAIFDDPSKIQYLPL---NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-P 120
           + ++     +   +                L+  +ID+L           ++    +   
Sbjct: 65  QEIARYTNWEYEFVTAEGTLDEQLSGLLTMLRDGEIDLLGA---MNYSERLAELFDYPEY 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTE-LTLADYFKAHNMKYHPIVF 176
                 +   + K     +       +   + V +    E   L  +   +  + + ++ 
Sbjct: 122 SYGTAHKTISVLKDNLEYTEFDYDSFNDIRVAVVSFDGQEDEKLNGFANMNGFRVNQVLC 181

Query: 177 ERVEEIDAAYRAHRCDAYTG 196
              EE     +  + DA   
Sbjct: 182 STGEEQMELLKTGKADAVLS 201


>gi|218135088|ref|ZP_03463892.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990473|gb|EEC56484.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC
           43243]
          Length = 508

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 6/105 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +  G L    N     +     NG   GFDVD  +A+   +      ++   +       
Sbjct: 177 RPNGTLVAATNAAFKPYEYYD-NGKMTGFDVDMIQAVCDILG---MNLKMEDMEFDSIIA 232

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           A+QS + D+       T   +    + F        Q  I+    
Sbjct: 233 AVQSGKADVGVAGITVTE--DRLKNIDFTDSYTTSKQMIIVKDPD 275


>gi|116255412|ref|YP_771245.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260060|emb|CAK03159.1| putative substrate-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 280

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 65/240 (27%), Gaps = 35/240 (14%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +      +    A+G   GF+ +  + L         +   +  +      AL + +
Sbjct: 30  TITLEGAYAPWNLTNADGTLGGFEPELAKVLCERA---KIECTLVASDWDGMIPALNAGK 86

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---------------- 140
            D++      T  R+    + F          F   K   +++                 
Sbjct: 87  FDVIMDALSITEERKKI--IDFTIPYAATPAAFAAAKDSPMANAAGTGATIKMTPGQTGV 144

Query: 141 -------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                      G +I +QA T     + D F           ++   + D   +  R D 
Sbjct: 145 KEIDALKEVFKGKTIGIQAATVYAKFVYDNF---GDIAEIREYKTGADRDLDLQNGRIDL 201

Query: 194 YTGDISALYALKLTNDRPSEHVILPDI---ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D    +A        +     P+I   I        + + DT+  +  +    + + 
Sbjct: 202 GFDDA-VYFANAFKAANDTLAFTGPEIAGSIWGEGEGLGLRKADTDLRDKFNEAIKSALA 260


>gi|24378947|ref|NP_720902.1| putative ABC transporter, amino acid binding protein [Streptococcus
           mutans UA159]
 gi|24376834|gb|AAN58208.1|AE014892_1 putative ABC transporter, amino acid binding protein [Streptococcus
           mutans UA159]
          Length = 273

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 16/228 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +    ++    F   K    + G+D+   +A+         K+++  ++       + S
Sbjct: 32  TITVATDSDTAPFTYKKDK-KFDGYDIALVKAIFKE--SKKYKVKFETVSFSSILTGIDS 88

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +  + + N      +E +    F              K     S+  LSG S+ V AG+
Sbjct: 89  GRYQLSANNF--NYSKERAGKYLFSNPISKSNYAIASKKG-KYKSLDDLSGKSVEVYAGS 145

Query: 155 TTELTLADYFKAHNMKYHPIVFE-----RVEEIDAAYRAHRCDA-YTGDISALYALKLTN 208
                L ++ K H  K    +        + +      A + D  +   IS    +K   
Sbjct: 146 NYAAILENWNKNHAEKTAIKIHYVANTVTLTQRLQNVEAGKIDFLFYDVISLQTVIKDQA 205

Query: 209 DRPS----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
                   +  I  +      L  A  +   +    V+     +  A 
Sbjct: 206 INLKITNVKGKIGGEKDGLEYLLFAKDKTGEKLQTFVNKRLKELKKAG 253


>gi|163867346|ref|YP_001608540.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           tribocorum CIP 105476]
 gi|161016987|emb|CAK00545.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           tribocorum CIP 105476]
          Length = 309

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 18/233 (7%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
                I+    L+         F  +   G   G+ +D  RA+ S +  +    +   + 
Sbjct: 71  DTTDIIR----LRFVTTFDFPPFNFLDQTGHLAGYHIDLLRAICSKLKLEK-FCEVEVVP 125

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQ 142
            KE    +++   +++      T   +    L F          F   +K  +     +Q
Sbjct: 126 WKELVEHVKNGGAEVIIAGLKETSQIQR--DLVFTKPYLRFPARFFASRKLNLDEPISNQ 183

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L   +  V + +  E     YF     K     F+  EE+  A + H+ D    D  AL 
Sbjct: 184 LVHLTSGVLSKSVHEQLFHYYFPKAQWKG----FKEREELYKALQEHKIDLIFDDGFALS 239

Query: 203 AL-KLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAMVT 250
              K        H +    ++   L      A+ + + +  +I+++   ++  
Sbjct: 240 LWVKSQKSVDCCHFVGGVYMAPQLLGQGMQLAVAKKNEKLIDILNYALKSLEE 292


>gi|122921285|pdb|2O1M|A Chain A, Crystal Structure Of The Probable Amino-Acid Abc
           Transporter Extracellular-Binding Protein Ytmk From
           Bacillus Subtilis. Northeast Structural Genomics
           Consortium Target Sr572
 gi|122921286|pdb|2O1M|B Chain B, Crystal Structure Of The Probable Amino-Acid Abc
           Transporter Extracellular-Binding Protein Ytmk From
           Bacillus Subtilis. Northeast Structural Genomics
           Consortium Target Sr572
          Length = 258

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 3/182 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            + + +     KK   +  G  T       +   GD  G+DV+  + L   +     K  
Sbjct: 2   GAGSQTTGAGQKKVQTITVGTGTQFPNICFIDEKGDLTGYDVELIKELDKRL--PHYKFT 59

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +         ++L   ++DI++   + +  RE           +F  +  ++     I  
Sbjct: 60  FKTXEFSNLLVSLGQHKVDIVAHQXEKSKEREKKFLFNKVAYNHFPLKITVLQNNDTIRG 119

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRAHRCDAYTGDI 198
           +  L G  +   A +   L L  + + +   +      +   E     ++ R DA     
Sbjct: 120 IEDLKGKRVITSATSNGALVLKKWNEDNGRPFEIAYEGQGANETANQLKSGRADATISTP 179

Query: 199 SA 200
            A
Sbjct: 180 FA 181


>gi|309809954|ref|ZP_07703802.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169742|gb|EFO71787.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 422

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 69/199 (34%), Gaps = 19/199 (9%)

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D++  + ++  +      +    ++     +AL+++++D++      T  R+    + 
Sbjct: 2   GVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTPTPERKK--SVD 56

Query: 118 FRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           F  I Y           + +    S+    G  I  Q G+     +           H  
Sbjct: 57  FSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQMPK----SHVK 112

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL---APAII 231
              ++  +  A ++ +  A   +     A    ++ PS +    D+  K P    A A+ 
Sbjct: 113 GLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--KEPQAGNAIAVA 168

Query: 232 QGDTEWYNIVSWTHYAMVT 250
           +   +    V+ T   ++ 
Sbjct: 169 KNQPDLLKEVNKTVDKVIA 187


>gi|117620433|ref|YP_856301.1| solute-binding family 3 protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|215275588|sp|A0KJ50|MLTF_AERHH RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|117561840|gb|ABK38788.1| bacterial extracellular solute-binding proteins, family 3
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 496

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 7/180 (3%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +S L  I++RG ++ G   G    +  + +   +GFD +  ++ +  +    + +     
Sbjct: 37  SSQLEQIRQRGEIRVGTIYG--PTSYYQRDDTAQGFDYELAQSYADWLGVKLTIVPVYST 94

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
              E    L+  ++D+ +     T  R                +    +       +  L
Sbjct: 95  A--ELVELLRKGKLDLAAAAIVVTPERRQLFRFG-PGFYQVSPKLVYRNGSPKPKDIGDL 151

Query: 144 SGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            G +I V AG+T E  L +  K + N+K+       VEE+       + D      + L 
Sbjct: 152 KG-NIVVPAGSTGEDLLKELAKQYPNLKWSTNRDADVEELLKQVADGKIDYTVVQDTVLA 210


>gi|259419226|ref|ZP_05743143.1| histidine kinase [Silicibacter sp. TrichCH4B]
 gi|259345448|gb|EEW57302.1| histidine kinase [Silicibacter sp. TrichCH4B]
          Length = 742

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 66/225 (29%), Gaps = 10/225 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G++  +  F  +  +G   GF ++    L   +     +I+Y  +  +E     + 
Sbjct: 214 VLTVGVHH-VPPFVSIGDDGTPGGFGIEVLEDL---VDLAGLQIRYQRITDEEFGQGPRE 269

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
             +D L         R   +   F           +         +  L G  + V++G 
Sbjct: 270 GSVD-LIPMMAINPTRAERMDFTFPVHRVPFNIFTLREVSLEPQVLDDLIGLRVGVESGK 328

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                 A      +     +  +  + I       + DA      A +       +  + 
Sbjct: 329 N-----AAQLAERHGGLDIVYADGKDGIMNLLLQGQADAVLTTGRAFWTHLEAEGQEEKF 383

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
               +    S   PA+  G  E    ++    A + +EE    Q 
Sbjct: 384 RSSTEPFYVSESGPALRLGLGEVRERLNAVIPAYLISEEYEALQA 428



 Score = 40.8 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 13/212 (6%)

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +  +G+  GF ++  R L+  +  +     Y P+       A  + + D+L        
Sbjct: 1   MMGDDGEPTGFAIELARLLAEEVGFELEFQFYGPIPKIAAAQA--TGETDMLVGVGHGPA 58

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            RE +L               + +        + LSG  I     T              
Sbjct: 59  FRETNLASQTISEVQVRLAVPVENADD--FDPNNLSGVRIAAVPPTIA------SNPDLF 110

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                +    +E       +   DA +  ++ L+AL            + D + +     
Sbjct: 111 PDATVVEQPGLEAALVTLLSGEVDALSYPVNVLFALTRATRTDGRIAYVGDPLVRIDRVV 170

Query: 229 AIIQGDTEWYNIVSWTHYAMVTA---EELGIT 257
            + +   E    ++            EEL I 
Sbjct: 171 IVHESRAELLEPINKALQKFEENGTLEELRIK 202


>gi|295107344|emb|CBL04887.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 323

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 61/225 (27%), Gaps = 17/225 (7%)

Query: 29  DIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            I K G L+ G+N G         ++    G DVD   AL+  +      +        +
Sbjct: 42  TIGKSGTLRVGVNAGSPPLAGSPSSSSKIVGIDVDVAAALADQLGLKLEIVDV----GTD 97

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
              AL+  ++D+           E  +     P     G                 S   
Sbjct: 98  PEAALKEGKVDVAMGIGS-----ESDVSFWRSPAYLPKGVALFSTSANATVPTKASSPKI 152

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
               + T++     ++      +   +    ++   AA           D      +   
Sbjct: 153 AAQVSSTSSWQVTNEF-----GQDALVSENDLKSAFAALADGSAQYVAADAVI--GMYAA 205

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
           +    +  I+  +         +++ +TE    V     A+    
Sbjct: 206 HSGDYDAQIVALMQQPGGYCVGVLEANTELQAAVKDALAALTDGG 250


>gi|330808383|ref|YP_004352845.1| putative Histidine kinase, Unorthodox [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327376491|gb|AEA67841.1| putative Histidine kinase, Unorthodox [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 1187

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 64/223 (28%), Gaps = 10/223 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++  +N     F    A+GD++G   D    +                N  E   A+ +
Sbjct: 285 VVRVVVNETSAPFTFFDADGDFRGISADLLELIRLRTGLRLDIQ--RRQNDSEMIAAVLN 342

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            Q D+++         E  L L F           +  K+    +     G +    A  
Sbjct: 343 DQADMIAALL---PSSERQLQLKFSRPYVDSSFVLLTRKQSDTPTTLDQFGHASLAIAKG 399

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                + ++ ++       I  +            + D              +       
Sbjct: 400 ---NPVIEWLRSQYPNIQIIETDGPLRAVEMLAHGQVDGSVNSQVMANYFISSYAWRDRL 456

Query: 215 VILPDIISKSPL-APAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
            I   + ++  + A A ++  TE   I+       +  +ELG+
Sbjct: 457 QISSTVGTQQAMFALATVKNATELNAILDKALT-SIDPDELGV 498



 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 79/252 (31%), Gaps = 15/252 (5%)

Query: 13  IILFFTSFSTNASILGDI-----KKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRA 66
            +L  +S +     L D+     + R  L  G +      F    +  D++G   D+   
Sbjct: 13  TLLGHSSMAHTEVKLDDVHRAWLQDRQALVLGTSAPDYPPFDLSTSGRDYEGLTADYADI 72

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           ++ A     S +++   + +    AL+  QID+L            +  +        D 
Sbjct: 73  IAKATGLPMSVLRFD--SREAAMAALKDGQIDMLG---TANGFEARNPDIVLSTPYAVDQ 127

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
              +    +  S    L G  + +         +   +           +   +    A 
Sbjct: 128 PVLVTRTNESRSLTDDLEGLRLSMVYHYLPLREIEKLYPKA----LITTYPSYQNAINAV 183

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              + D + GD  + + +       +  +             A+ + DT    +++ T  
Sbjct: 184 AFGQADVFLGDTLSTHYMINKGYLSNIRMASFGKHESHGFGFAVRRNDTRLLEVINATLN 243

Query: 247 AMVTAEELGITQ 258
            +  AE+  I++
Sbjct: 244 QVSIAEQAAISK 255


>gi|110635225|ref|YP_675433.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110286209|gb|ABG64268.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 286

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 83/259 (32%), Gaps = 18/259 (6%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           + ++ ++++  +    + S L ++++ G LK  +        +   +    GFDV+    
Sbjct: 16  IGLIAVLLIALSFLPPDNS-LAEVQENGVLKLCVPESYPPLVQADEDSP--GFDVELAGL 72

Query: 67  LSSAIFDD--PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           ++  I      + +  +  +   R   L   Q +I++     T+  +  L          
Sbjct: 73  IAQEIGVRLVVNVMPSIGRDFNPRNWRLTRGQCNIIAGGVADTVQTQGFLQTLPTLA-ET 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
              G        +       G+S  V  GT+    LA             +     E+ A
Sbjct: 132 GWVGI------SLDGSLPARGSSWAVWPGTSGLDRLALSRWLRENDVKARLVSSPTELRA 185

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                  D    +  A  A  + N +     + P+   +  +A  + +GD   Y  V   
Sbjct: 186 LLDRGEIDGAITERFAASATGIDNGKYQVFWLPPESFERFRMALGLWKGDQTLYRAVRAA 245

Query: 245 HYAMVTAEELGITQKNINQ 263
                   +L    KNI  
Sbjct: 246 LK------KLDYKVKNIGS 258


>gi|295675446|ref|YP_003603970.1| multi-sensor hybrid histidine kinase [Burkholderia sp. CCGE1002]
 gi|295435289|gb|ADG14459.1| multi-sensor hybrid histidine kinase [Burkholderia sp. CCGE1002]
          Length = 1415

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 74/245 (30%), Gaps = 12/245 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G +     F+ V A G   G   D+   LSS +       +    +      A Q  
Sbjct: 244 LQIGFDDDWAPFSYVDAAGRPVGLTADYLAYLSSTLGV--VFSRARTADWAATVDAFQRG 301

Query: 96  QIDILSRNTDWTLLREI-SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            + +LS     T  R    +G     +   D          G+ +       + C    +
Sbjct: 302 DLAMLSS----TSSRGALLVGADHSRVYESDPLVVAGR--SGVPTPCWFDDITSCRVVMS 355

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                            H +V   + E      +   D   G+ +A+    L        
Sbjct: 356 PHVAGSVPLALEAVPVDHIVVAGSLGEAMRMVASGEADVLVGNAAAINVQ-LRQHYAGAL 414

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
            +L  +     L  A+ +  +    ++     AM  AE+  I +K ++  + D     V 
Sbjct: 415 RVLDSLGESDSLYFAVREDLSPLVKLIDRALQAMPAAEKQRIRRKWVSPAAPDNAVWSVT 474

Query: 275 --RFL 277
             R L
Sbjct: 475 AVRLL 479



 Score = 59.3 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 76/261 (29%), Gaps = 15/261 (5%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
             G   F   +  G   G   D  RAL   +  +         +  +   A  + ++D+L
Sbjct: 3   EGGWPPFDIPRG-GQLAGVSGDLLRAL---VGPNVVIETKSFPDMAKLVAAACAGEVDLL 58

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160
           +     T  RE  LG    P  +      +          + L+GA I ++ G   E  L
Sbjct: 59  TS-IARTPERERCLGFT-APYFHSFASAVVRRDDARYEKPTDLAGARIAIERGFARERLL 116

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220
              F         + F        A      D Y G    +     T+   +  V     
Sbjct: 117 RAGFPRAK----IVSFASTHAALNAVLNGDADVYFGFTPVVQYELATDAYRNLRVAFEQG 172

Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280
                L  A+        + ++    +M  AE   I  + ++        P   RF    
Sbjct: 173 GKALDLRFAVSPRQLALRDQLNRALVSMNPAEAAAIRARWLSGNFNAAPVPGASRFTLTP 232

Query: 281 KSSNIGEAL-----GLTKDWT 296
           +  N   AL     G   DW 
Sbjct: 233 EEKNWLRALPPLQIGFDDDWA 253


>gi|119489536|ref|ZP_01622297.1| sensory transduction histidine kinase [Lyngbya sp. PCC 8106]
 gi|119454615|gb|EAW35762.1| sensory transduction histidine kinase [Lyngbya sp. PCC 8106]
          Length = 738

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 17/272 (6%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I+    L+    +    +  V  NG+ KGF  ++ + ++  +  +   +  +     E  
Sbjct: 64  IEANPVLRVHAESQWPPYNFV-ENGNVKGFSNEYIQLIAQKVGFEVEFV--VGPTWDEFM 120

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
             L  K+ID+++ N   T  R+     + + +             K  + + QL G ++ 
Sbjct: 121 TLLAQKKIDLVT-NMVITEDRQKFAIYSDQYVFDLVNSLLTRKDGKDYTELEQLKGKNLA 179

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL--KLT 207
           +  G   E  L  Y+       + ++     +      A R DA   + +       +  
Sbjct: 180 IVRGFFFEEILTKYYPE----INLLLTNNTLDAMKQVEAGRADAALENHATFNYYIDRYF 235

Query: 208 NDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                   ++ +         L   I        +I+     A+   E   + ++     
Sbjct: 236 LKDLVSRPLINNPYLSNAGQYLG--IRNDRPILKSILDKAMAAVSEEEYANLRRRWYLAS 293

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
              +     ++   +     I   + +   W 
Sbjct: 294 DTASFGFSKRQLEYLQDKGQI--KMCVDPSWM 323


>gi|254492489|ref|ZP_05105661.1| Transglycosylase SLT domain protein [Methylophaga thiooxidans
           DMS010]
 gi|224462381|gb|EEF78658.1| Transglycosylase SLT domain protein [Methylophaga thiooxydans
           DMS010]
          Length = 469

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 68/229 (29%), Gaps = 14/229 (6%)

Query: 7   VSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
             +L  +     + S  +          +I   G L   +         + A+G+  G++
Sbjct: 21  AVLLITMAALLVACSKESDTTGPARTYQEIIDSGELLI-VTRNAPSTWYIDADGEPTGYE 79

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D  +A    +   P  I  +  + K  F  L+S   D+ +        R+    +   P
Sbjct: 80  YDLAKAYVQHLNLTPRFI--IKDSIKAVFDTLRSGDADVAAAGLTVLPTRQAEFLV--GP 135

Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 Q  + H+          LS   I V  G++    L +  + +N        +  
Sbjct: 136 EYNRVHQVLVCHRDGYKPEGYDELSEIDIVVAEGSSYAEQLNEIKQQNNPTLTWQETDDY 195

Query: 180 E--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
              E+       + D    D + +   +         + L +    +  
Sbjct: 196 STEELLEKVAEEKVDCTVADSTIVKINRRYFPELMVTMQLTESQDIALY 244


>gi|39938564|ref|NP_950330.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39721673|dbj|BAD04163.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 601

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 91/296 (30%), Gaps = 43/296 (14%)

Query: 8   SILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEV---KAN---------G 54
            +L + ++F+     +  +   +   + +L+  +       +       +         G
Sbjct: 21  VLLFMFMIFWVWLHFSVGLFQRVNNSKKYLRVAVVADAAPNSLTIKSDKDTSKAHRTIQG 80

Query: 55  DWK-GFDVDFCRALSSAI--FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           ++  GFD+D    +  A+   +     ++   +    F A+Q+  +D+   +   T  R+
Sbjct: 81  EYISGFDIDLIDKIVKALPQEEKYEGCKFSLFDFDGMFTAVQNGSVDVAISSISITDKRK 140

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGIS-------SVSQLSG-----------ASICVQAG 153
                 F      D  GF++ K                + G                  G
Sbjct: 141 E--NFDFPIAYTLDNTGFLVRKDDARFKDLPKEVKYEDIKGILKDSKDPKDPIKFLTLTG 198

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAA---YRAHRCDAYTGDISALYALKLTNDR 210
           +  +  + +         H      +++        +    D +  D          ND 
Sbjct: 199 SVADKVIENIRSDLGNLLHITKSNPIDDAVMCAQSVKDKASDIFVTDSYITKYYASQNDE 258

Query: 211 PSEHVILPD--IISKSP--LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
                I+ D    + SP  L   + +G+T+    ++     ++  EEL +    ++
Sbjct: 259 LKHISIISDDARFTVSPTGLGIVVKKGNTKLITQINNAFKEVLKKEELILEGYGLD 314


>gi|330952157|gb|EGH52417.1| FliY [Pseudomonas syringae Cit 7]
          Length = 277

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 14/215 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +     + L     + ++S     ++ G +  G +     +  +       GFD
Sbjct: 1   MKLSALIVRPVALALLGAVVAMSSSAASAFQQPGKIIAGSDMTFFPYEYMD-KNRPAGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++F   L+  +      I             LQ  + DI + +   T  R   + +    
Sbjct: 60  IEFLDGLAKVMGLKAENID---TRFPNLIGGLQGGRFDITNSSMYITADRLKVIDMI--- 113

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPI 174
                G+  +  K       +     G  I   A T+    L     DY   + ++   I
Sbjct: 114 PYLKSGEAILSVKGSDYQPKTPEDFCGHKIGSMAATSWLQQLQKLSTDYCVKNGLQPIAI 173

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             +    +   A  AH  +A   D +    +    
Sbjct: 174 SEYGTDPQTTQAMLAHAVEAQITDAAVARGVVEKL 208


>gi|224026186|ref|ZP_03644552.1| hypothetical protein BACCOPRO_02942 [Bacteroides coprophilus DSM
           18228]
 gi|224019422|gb|EEF77420.1| hypothetical protein BACCOPRO_02942 [Bacteroides coprophilus DSM
           18228]
          Length = 272

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 78/265 (29%), Gaps = 22/265 (8%)

Query: 4   DFFVSILCLIILFFTSFSTNAS--ILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKG 58
                I+  +IL  T          L D   IK+ G L+       +  +   +    +G
Sbjct: 9   WLLAGIVIAVILLCTQPEAQEPPATLRDYPEIKQSGILRAVTEYNAI--SYHVSGDTIQG 66

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD +   A +         I    ++  +R   +   + DIL+  T  T        L F
Sbjct: 67  FDYELLHAFAKEKGLQLEIIP--EMSFDKRLQMISDGKCDILATGTIITTR--SKHSLLF 122

Query: 119 RPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
                   Q  +  KK        I S   L+  ++ V   + T L + +  +      +
Sbjct: 123 THTLQLSKQVLVQRKKEEGKDSMYIKSQLDLAHKTLHVIKHSPTLLRIHNLMEEIADTIY 182

Query: 173 PIVFERV--EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
                +   E++ A       D    D       K +        I  DI      A  +
Sbjct: 183 VKQVTQYGPEQLLAMVAEGDIDYAVCDEHI---AKASIKDFPNLDINTDISFTQFYAWGV 239

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255
            +      + ++        ++E  
Sbjct: 240 GKYAPILLDSLNSWLDTYTESKEYK 264


>gi|297580347|ref|ZP_06942274.1| GGDEF family protein [Vibrio cholerae RC385]
 gi|297535993|gb|EFH74827.1| GGDEF family protein [Vibrio cholerae RC385]
          Length = 469

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 86/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 16  KLFLLLMIAWPLLFGSMSEA--------VERQTLTIANSKAWKPYSYLDEQGQPSGILID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   IQ+  ++  +   A++  + D +      +  R     L F    
Sbjct: 68  FWLAFGEANHVD---IQFQLMDWNDSLEAVKLGKAD-IQAGLIRSPSRLAY--LDFAEPL 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   ++ V  G        ++ +    +   I +   E +
Sbjct: 122 LTIDTQLYVHRTLLGDKLDTLLSGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 182 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 240

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 241 Q-GFAQLSSNEKN 252


>gi|117925683|ref|YP_866300.1| multi-sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
 gi|117609439|gb|ABK44894.1| multi-sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
          Length = 1788

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 76/267 (28%), Gaps = 18/267 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G+  G        A G  +G   D    L   +      ++ +       +  +  
Sbjct: 292 KIRIGVMRGWPPIDFADAQGRPQGIGTDTVHLLDEMLGG--GVLEIVSDTWPTLYQQVID 349

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAG 153
           K++D L      T          F                   ++ +  L G ++ V+  
Sbjct: 350 KKLDGL---MGITPTEARRPFFEFTAPYMTIPHAIFARSDAPYATGLKSLQGKTVVVEKH 406

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 L   F +       +      E   A       AY G+ +    +       + 
Sbjct: 407 FFVADLLRHTFPS----IKILERRDTREALYAVSKGDAYAYVGNRAVATYIIDQEIISNV 462

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK----NINQVSKDTT 269
             +    +S+S  A  + +      +++      +  A++  +  K    ++    +   
Sbjct: 463 QEMGIVRLSRSDNAIGVRKDWPILRDVLQKGLSQITMAQKREMAAKWVKGSVQAPLELPL 522

Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWT 296
               QR+L           LG+ ++W 
Sbjct: 523 TKGEQRWLSEHPQVR----LGVRENWA 545



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 62/199 (31%), Gaps = 24/199 (12%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G++     ++ +  +G ++G   +  +AL++        + +  +        L  
Sbjct: 42  VVRVGMDPAFAPYSFI-EDGRYQGIVPEMLQALAAETG-----LVFETVAGLSWSEILAG 95

Query: 95  KQIDI--LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQ 151
            +     L  +   T  R+  L   +  I        +       +SS + L G  + + 
Sbjct: 96  AKARHLDLVASLVQTPERDRFLQ--YTQIYLPTPLVVMARNDDSSMSSAADLVGKRVALV 153

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDR 210
               T   L            P + E V +   A    + DA+ G I    Y  +     
Sbjct: 154 RDYATSAKLLQEHPE----SIPYMVESVAQGLLAVSVGQADAFVGAIGVSDYTARQK--- 206

Query: 211 PSEHVILPDIISKSPLAPA 229
                 L ++   +P    
Sbjct: 207 -----GLSNLKVVAPYGGL 220



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 70/237 (29%), Gaps = 13/237 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G+      +      G  +G   D+      A+ D    +     + ++    ++ K
Sbjct: 536 VRLGVRENWAPYDYQDRAGFQQGIAADY-----VALLDRYLTVTMKMQHIRDDSEWVRIK 590

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154
               +   T  T     S G+             +M +    +  +  L G +I V  G 
Sbjct: 591 DTLDVL--TTLTPQSAKSTGMLPTSSYLRLPLVMMMRRASPLVEGIEDLKGRTISVVQGV 648

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                LA  +               E+   A       A+   I A+             
Sbjct: 649 VDTYALAKRYPWVMW----RNMATTEQALQALAQGEVTAHLDTIPAVRVATERLA-LDSL 703

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
            ++     +  L+  +     E  +I++    A+  AE+  I Q  +   ++   + 
Sbjct: 704 QVVTPTDLQLQLSFGVRPDWPELVSIINKVMQAVPPAEKRVIVQSWMRPRTQTAMDW 760


>gi|170289425|ref|YP_001739663.1| metal dependent phosphohydrolase [Thermotoga sp. RQ2]
 gi|170176928|gb|ACB09980.1| metal dependent phosphohydrolase [Thermotoga sp. RQ2]
          Length = 615

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 12/221 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+  ++     F+    +G+  G  VDF +  S     +   ++ +P+  +     +  K
Sbjct: 20  LRIALDEDYAPFSFYDESGNLAGISVDFWKLFSEKTGIE---VELVPVKWQLAQQMVLEK 76

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++D +      T  RE    L+F    +         K   + + S LS   +    G  
Sbjct: 77  KVDAI-DQIFKTPEREEF--LSFSKPVFEMRSCVFFRKDLPVKTFSDLSSYVVGALRG-- 131

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               + D     N       F+    +  A +      + GD              S+ +
Sbjct: 132 --EGMVDVLLRKNPDVRFEFFDNYSSMMEALKKREISVFLGDDVVARYYLSKEGLLSDFL 189

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
            L   +  + L  A+++G+      V+     +   E   I
Sbjct: 190 TL--HLETNYLHVAVLKGNESILETVNSGLSLVSEDERNEI 228


>gi|289678372|ref|ZP_06499262.1| extracellular solute-binding protein [Pseudomonas syringae pv.
          syringae FF5]
          Length = 76

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 1  MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
          M     + I  L+ L  ++     + L  ++K   L   +      F+ +    +  GFD
Sbjct: 1  MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59

Query: 61 VDFCRALSSAIF 72
          VD  +A++  + 
Sbjct: 60 VDVAKAVAQKLG 71


>gi|229505524|ref|ZP_04395034.1| transglycosylase Slt family [Vibrio cholerae BX 330286]
 gi|229510805|ref|ZP_04400284.1| transglycosylase Slt family [Vibrio cholerae B33]
 gi|229517926|ref|ZP_04407370.1| transglycosylase Slt family [Vibrio cholerae RC9]
 gi|229523331|ref|ZP_04412738.1| transglycosylase Slt family [Vibrio cholerae TM 11079-80]
 gi|229608544|ref|YP_002879192.1| transglycosylase [Vibrio cholerae MJ-1236]
 gi|229339694|gb|EEO04709.1| transglycosylase Slt family [Vibrio cholerae TM 11079-80]
 gi|229344641|gb|EEO09615.1| transglycosylase Slt family [Vibrio cholerae RC9]
 gi|229350770|gb|EEO15711.1| transglycosylase Slt family [Vibrio cholerae B33]
 gi|229357747|gb|EEO22664.1| transglycosylase Slt family [Vibrio cholerae BX 330286]
 gi|229371199|gb|ACQ61622.1| transglycosylase Slt family [Vibrio cholerae MJ-1236]
          Length = 531

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 69/227 (30%), Gaps = 21/227 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 34  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 91

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                             +  + 
Sbjct: 92  S--LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFKQLVE 149

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            ++  +    +L+  S+ V         LA   K  + ++H      V ++         
Sbjct: 150 RQQTLLKDNPELAFFSV-VDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGEL 208

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +T   S   +L        E     ++    P++  I + D E  
Sbjct: 209 -LFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDDESL 252


>gi|153824613|ref|ZP_01977280.1| transglycosylase, Slt family [Vibrio cholerae MZO-2]
 gi|254285544|ref|ZP_04960508.1| transglycosylase, Slt family [Vibrio cholerae AM-19226]
 gi|149741831|gb|EDM55860.1| transglycosylase, Slt family [Vibrio cholerae MZO-2]
 gi|150424406|gb|EDN16343.1| transglycosylase, Slt family [Vibrio cholerae AM-19226]
          Length = 530

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 69/227 (30%), Gaps = 21/227 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 33  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 90

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                             +  + 
Sbjct: 91  S--LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFKQLVE 148

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            ++  +    +L+  S+ V         LA   K  + ++H      V ++         
Sbjct: 149 RQQTLLKDNPELAFFSV-VDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGEL 207

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +T   S   +L        E     ++    P++  I + D E  
Sbjct: 208 -LFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDDESL 251


>gi|15640882|ref|NP_230513.1| Slt family transglycosylase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585673|ref|ZP_01675468.1| transglycosylase, Slt family [Vibrio cholerae 2740-80]
 gi|121728350|ref|ZP_01681380.1| transglycosylase, Slt family [Vibrio cholerae V52]
 gi|147674227|ref|YP_001216347.1| Slt family transglycosylase [Vibrio cholerae O395]
 gi|153216540|ref|ZP_01950503.1| transglycosylase, Slt family [Vibrio cholerae 1587]
 gi|153802060|ref|ZP_01956646.1| transglycosylase, Slt family [Vibrio cholerae MZO-3]
 gi|153819006|ref|ZP_01971673.1| transglycosylase, Slt family [Vibrio cholerae NCTC 8457]
 gi|153823080|ref|ZP_01975747.1| transglycosylase, Slt family [Vibrio cholerae B33]
 gi|227081042|ref|YP_002809593.1| transglycosylase, Slt family [Vibrio cholerae M66-2]
 gi|254225103|ref|ZP_04918717.1| transglycosylase, Slt family [Vibrio cholerae V51]
 gi|254848004|ref|ZP_05237354.1| transglycosylase [Vibrio cholerae MO10]
 gi|255744663|ref|ZP_05418614.1| transglycosylase Slt family [Vibrio cholera CIRS 101]
 gi|262161203|ref|ZP_06030314.1| transglycosylase Slt family [Vibrio cholerae INDRE 91/1]
 gi|262168708|ref|ZP_06036403.1| transglycosylase Slt family [Vibrio cholerae RC27]
 gi|262190738|ref|ZP_06048967.1| transglycosylase Slt family [Vibrio cholerae CT 5369-93]
 gi|297581256|ref|ZP_06943180.1| transglycosylase [Vibrio cholerae RC385]
 gi|298499007|ref|ZP_07008814.1| transglycosylase [Vibrio cholerae MAK 757]
 gi|81545272|sp|Q9KTN5|MLTF_VIBCH RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|215275675|sp|A5F353|MLTF_VIBC3 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|9655319|gb|AAF94028.1| transglycosylase, Slt family [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121550036|gb|EAX60052.1| transglycosylase, Slt family [Vibrio cholerae 2740-80]
 gi|121629405|gb|EAX61835.1| transglycosylase, Slt family [Vibrio cholerae V52]
 gi|124114215|gb|EAY33035.1| transglycosylase, Slt family [Vibrio cholerae 1587]
 gi|124122419|gb|EAY41162.1| transglycosylase, Slt family [Vibrio cholerae MZO-3]
 gi|125622490|gb|EAZ50810.1| transglycosylase, Slt family [Vibrio cholerae V51]
 gi|126510439|gb|EAZ73033.1| transglycosylase, Slt family [Vibrio cholerae NCTC 8457]
 gi|126519406|gb|EAZ76629.1| transglycosylase, Slt family [Vibrio cholerae B33]
 gi|146316110|gb|ABQ20649.1| transglycosylase, Slt family [Vibrio cholerae O395]
 gi|227008930|gb|ACP05142.1| transglycosylase, Slt family [Vibrio cholerae M66-2]
 gi|227012686|gb|ACP08896.1| transglycosylase, Slt family [Vibrio cholerae O395]
 gi|254843709|gb|EET22123.1| transglycosylase [Vibrio cholerae MO10]
 gi|255737694|gb|EET93088.1| transglycosylase Slt family [Vibrio cholera CIRS 101]
 gi|262022826|gb|EEY41532.1| transglycosylase Slt family [Vibrio cholerae RC27]
 gi|262028953|gb|EEY47606.1| transglycosylase Slt family [Vibrio cholerae INDRE 91/1]
 gi|262033382|gb|EEY51891.1| transglycosylase Slt family [Vibrio cholerae CT 5369-93]
 gi|297534572|gb|EFH73409.1| transglycosylase [Vibrio cholerae RC385]
 gi|297543340|gb|EFH79390.1| transglycosylase [Vibrio cholerae MAK 757]
          Length = 530

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 69/227 (30%), Gaps = 21/227 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 33  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 90

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-------------YFDGQGFIM 131
           +   F AL++ ++DI++     +  R                             +  + 
Sbjct: 91  S--LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFKQLVE 148

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            ++  +    +L+  S+ V         LA   K  + ++H      V ++         
Sbjct: 149 RQQTLLKDNPELAFFSV-VDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGEL 207

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +T   S   +L        E     ++    P++  I + D E  
Sbjct: 208 -LFTMADSVEVSLSQRIY--PELAAAFELTEDQPISWFIRRSDDESL 251


>gi|170741928|ref|YP_001770583.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
 gi|168196202|gb|ACA18149.1| extracellular solute-binding protein family 3 [Methylobacterium sp.
           4-46]
          Length = 295

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 66/262 (25%), Gaps = 30/262 (11%)

Query: 5   FFVSILCLIILFFTSFSTNASIL-------------GDIKKRGFLKCGINTGLVGFAEVK 51
               +L L +      +     +                +    ++   +          
Sbjct: 23  VLAPVLALALWCGAGRAAEPVTIPNFWNPRARLERPEPPQTSRAVRFITDDEYPPLHFAG 82

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G+  GF V+  RA    +                   AL +K+ D+++     T    
Sbjct: 83  PDGNPTGFSVELARAACEKL---NLTCTVQARRFDTLLDALAAKEGDVVAAAIPLTPA-- 137

Query: 112 ISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           +          +     F++   K         L+  S+ V AGT  E  L  +F+    
Sbjct: 138 LRANFLATRPYFRWPARFVVRADKGLPAPDAKALATRSVGVVAGTAHEAYLKAFFR---- 193

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDIISKS 224
              P  F  +    AA +    D    D  AL       D            L +     
Sbjct: 194 -TTPRGFPDLGTAQAALKRGEIDYLFADGVALALWLGGVDAAGCCAFAGGDYLENRYFGE 252

Query: 225 PLAPAIIQGDTEWYNIVSWTHY 246
            +     + D      +     
Sbjct: 253 GIGLVTRKEDEVLARALDDALQ 274


>gi|157376715|ref|YP_001475315.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
 gi|157319089|gb|ABV38187.1| extracellular solute-binding protein, family 3 [Shewanella
           sediminis HAW-EB3]
          Length = 738

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 69/231 (29%), Gaps = 11/231 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   + S+  + +  I+ RG L+ G     V F+     G   GFD      L+  +  +
Sbjct: 475 VLGQTPSSPVADIQAIRTRGILRVGYTPSNVPFSYYNNAGQLVGFDSAMATKLAEDLDVE 534

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
              I +          +L++   DI        +       L++                
Sbjct: 535 VEFIPFRKAE---LARSLKAGFFDIAMSGLAMDIR--QMDQLSYCEPVLELNLAIATKDH 589

Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
                 S   +        A       + D   A+      +  E  +      +  + D
Sbjct: 590 LVNSFKSSQSILEMEQVTIAYAEHGDAIEDVA-ANYPNIEFVKVEGYKNFFRQ-KDDKYD 647

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A     SA      T   P   + L +  S+ P+A A+ Q +    N V+ 
Sbjct: 648 AMVI--SAQAGSAWTLFFPGYGIALLESKSRYPVAYAVAQNNQSLLNYVNN 696


>gi|302189419|ref|ZP_07266092.1| FliY [Pseudomonas syringae pv. syringae 642]
          Length = 277

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 14/215 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +     + L     + ++S     ++ G +  G +     +  +       GFD
Sbjct: 1   MKLSALIVRPVALALLGAVVAMSSSAASAFQQPGKIIAGSDMTFFPYEYMD-KNRPAGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++F   L+  +      I             LQ  + DI + +   T  R   + +    
Sbjct: 60  IEFLDGLAKVMGLKAENID---TRFPNLIGGLQGGRFDITNSSMYITADRLKVIDMI--- 113

Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPI 174
                G+  +  K       +     G  I   A T+    L     DY   + ++   I
Sbjct: 114 PYLKSGEAILSVKGSAYQPKTPEDFCGHKIGSMAATSWLQQLQKLSTDYCVKNGLQPIAI 173

Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             +    +   A  AH  +A   D +    +    
Sbjct: 174 SEYGTDPQTTQAMLAHAVEAQITDAAVARGVVEKL 208


>gi|239828667|ref|YP_002951291.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
 gi|239808960|gb|ACS26025.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
          Length = 195

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 44/161 (27%), Gaps = 5/161 (3%)

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             I          F  LQSK+ID+          R+      F    +      ++ +  
Sbjct: 1   MNIHLFQDGWNPLFAVLQSKEIDMAISGITINDKRK--QTYDFSIPYFESTYMIMVKENS 58

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
            I +   L G +I VQ GTT +  +       N   +   FE              +A  
Sbjct: 59  PIKNALDLKGKTIGVQNGTTGQAAVEKLLGKEN--KNIKKFENTVVAIMDLLNGGGEAVV 116

Query: 196 GDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDT 235
            D +        N       I  P+            +G  
Sbjct: 117 TDNAVASEYVKNNPDKKIKTIADPEHFESEFYGLMFPKGSD 157


>gi|324115110|gb|EGC09075.1| extracellular solute-binding protein 3 [Escherichia fergusonii
           B253]
          Length = 276

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 69/218 (31%), Gaps = 18/218 (8%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +  ++ + L+       S NA+     ++   +  G +     +  +  N    GF
Sbjct: 1   MKKFNTLLNTVPLLYASVVLASFNANAF---QQSEKIIAGSDMTFYPYEYM-ENNQPAGF 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++F   L+  +  D   I             LQ ++ DI + +   T  R   + +   
Sbjct: 57  DIEFLAGLAKVMGRDAVNID---TRFPNLIPGLQGERFDITNSSMYITAERLKVIDM--- 110

Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHP 173
                 G+  ++ K             G  I     T+    L    ADY   + ++   
Sbjct: 111 VPYLKSGESILVLKGSEYQPKKPEDFCGHKIGSMGATSWLAQLQKLSADYCVKNGLEPIV 170

Query: 174 I-VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +  +    +   A  +   +A   D +    +      
Sbjct: 171 LSEYATDPQTTQALLSRAVEAQITDAAVAKGVIDKLGD 208


>gi|320535456|ref|ZP_08035563.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
 gi|320147689|gb|EFW39198.1| bacterial extracellular solute-binding protein, family 3 [Treponema
           phagedenis F0421]
          Length = 271

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 68/245 (27%), Gaps = 23/245 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58
           K     + C   + F +  +     S L ++K R  +             V    G  +G
Sbjct: 5   KKIVAVLFCFCAISFLAAQSKKGGKSALPNLKGR-TIYAVTENAYPPLNFVNPKTGKGEG 63

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           ++ D    +   +    +KI +  ++      A++ +Q D+          R+    + F
Sbjct: 64  WEYDAVNEIGKRL---NAKIVWNLISWDAMIQAIRDEQFDVGMDGITINDERKK--QVDF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQ--------LSGASICVQAGTTTELTLADYFKAHNMK 170
                      ++   +      +        L G+         T   + D  + +   
Sbjct: 119 SEPYLISQMFMLVRANENRFKNEKEFAANKKLLVGSQNGTTNFYVTVYDVLDGDEKNK-- 176

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
               +FE       A  A   D    D ++          P +   +   +    L    
Sbjct: 177 -RIKLFETFGASVQALIAGDVDMVLMDAASSRGYI--GANPGKLKTVGGPLGTDELGFIF 233

Query: 231 IQGDT 235
            +G  
Sbjct: 234 KKGSD 238


>gi|310829700|ref|YP_003962057.1| putative GGDEF domain protein [Eubacterium limosum KIST612]
 gi|308741434|gb|ADO39094.1| putative GGDEF domain protein [Eubacterium limosum KIST612]
          Length = 616

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 106/298 (35%), Gaps = 23/298 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K         + L      T + +  +  ++  ++        GF+   + G+  G+ 
Sbjct: 1   MKKHTIQIWSMGLALCLVFCLTTSRVQAE--EKKIIRVA-FPEQTGFSSTDSAGNHSGYT 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAK--ERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            +F   ++     +   I     +    +    L++ +ID +     +T    ++    F
Sbjct: 58  YEFLEEIAKYTGWEYEFITGDSSDESLLKMMEDLKNGRID-IMGGMVYTPQ--LAEDYDF 114

Query: 119 RPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTT---ELTLADYFKAHNMKYHP 173
                      +      + +++ +  +  ++ V A  T       L ++ +A+ +    
Sbjct: 115 PEYNCGYSYSTLSVLKDNEDVNATNYSTFNNMKVGARKTATRRIQALNEFCRANGITLSI 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + ++  E + AA ++   DA  G   A+           +   +       P   A+ +G
Sbjct: 175 VEYDSDEAMQAALKSGGVDALLGPDVAM----------GDDERIVARFDGRPYYFAVTKG 224

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +TE  + ++    A+        T+  +   +K+     ++ F+  + + +I  ALG+
Sbjct: 225 NTEVVSGINTATAAINEQNPNYATELYMKYFNKNNQQVTLESFIKANPTESIVAALGI 282


>gi|166031610|ref|ZP_02234439.1| hypothetical protein DORFOR_01310 [Dorea formicigenerans ATCC
           27755]
 gi|166028587|gb|EDR47344.1| hypothetical protein DORFOR_01310 [Dorea formicigenerans ATCC
           27755]
          Length = 293

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 58/193 (30%), Gaps = 22/193 (11%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  ++ L   K +  L    N     F   K +  + G D++  + L+  +  +   +  
Sbjct: 96  AVESAKLDSSKDQ--LVVATNAAFEPFEYTKGD-SYYGIDMEIAKLLADELGKE---LVI 149

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             ++     L++  ++ DI          RE    + F    Y   Q  I+         
Sbjct: 150 ENMDFDAVCLSVSQQKCDIAMAGLTINEEREEY--VTFTDSYYSASQRLIVPSDNTAFDD 207

Query: 141 SQLSG------------ASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAY 186
            + +               I VQAGTT +  +   + +    +    + ++         
Sbjct: 208 CKSADDVAALLAKTEKSDKIGVQAGTTGQYYVEGSEDWDFPGLPAECVTYKSGSLAVQDM 267

Query: 187 RAHRCDAYTGDIS 199
                     D +
Sbjct: 268 LNGNITYVIIDAA 280


>gi|91784322|ref|YP_559528.1| ABC polar amino acid transporter, periplasmic ligand binding
           protein [Burkholderia xenovorans LB400]
 gi|91688276|gb|ABE31476.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 284

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 58/223 (26%), Gaps = 15/223 (6%)

Query: 30  IKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           I  +  L    +                +G +VD  + +  A+        Y        
Sbjct: 38  IVAKHGLAFCSDLSNPPADGTADDGSTPQGAEVDIMKEVGKAMGVPTRIDNYQ---FSGI 94

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGA 146
           F AL + + D++  +   T  R     L      +    G ++       ++    L G 
Sbjct: 95  FAALDTGKCDMVMASLGKTPERAQRYEL---VDYWRVASGLLVPAGNPRHLTKFEDLGGT 151

Query: 147 SICVQAGTTTELTLADYFK----AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            + V  G+     L         A       +               R DA+  D   + 
Sbjct: 152 RVAVLLGSRNASVLHQINDQLKVAGKPPIETVELNTNAAAYQDLALGRVDAFVSDTVNIN 211

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
             +  +       +    +       AI +G+ E    V    
Sbjct: 212 YYRSRSH--GRFEVGGVPVPPKTWTIAIPKGNVELKQAVQAAI 252


>gi|330985034|gb|EGH83137.1| membrane-bound lytic transglycosylase F [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 524

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 64/240 (26%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            I     L   +     + L  +K+ G L+         +     NG+  GF+ +  +  
Sbjct: 43  LIATGFFLMLGACVEKPTTLERVKEDGVLRVITRNSPATY-FQDRNGE-TGFEYELVKRF 100

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +        L+        +     + +     T  R+      F         
Sbjct: 101 ADDLGVELKIETADNLD-DLFDQMNKPGGPVLGAAGLIETPKRK--QQARFSHSYLEVTP 157

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             +    +   +    L G  I V  G+     LA     +  ++Y       V ++   
Sbjct: 158 QVVYRNGQSRPTDPGDLVGKRIVVLKGSAHAEQLAALKAQNPGLEYEESDAVEVVDLLRM 217

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + L   ++          L +   +          D    N ++   
Sbjct: 218 VDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGEA--REQRWVVAPGEDNSLLNEINAYL 275


>gi|325830829|ref|ZP_08164213.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella
           sp. HGA1]
 gi|325487236|gb|EGC89679.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella
           sp. HGA1]
          Length = 346

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 71/263 (26%), Gaps = 33/263 (12%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNAS--------ILG--DIKKRGFLKCGINTG 43
           M +          V+ +  +++  T  S+  S         L    I K G L+ G+NT 
Sbjct: 12  MKRYKTLASCCMAVACMAALLVVLTGCSSQQSYTPPEKTPTLSSPTIGKDGTLRVGVNTD 71

Query: 44  LVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
                 +  ++    G DVD   AL+ +       +        +   AL+   +DI+  
Sbjct: 72  NQPLAGQPSSSSKIVGIDVDVAAALADSFGLKLEVVNV----GSDAESALKEGTVDIV-- 125

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
                   + S                           + +    I  Q  + +   + +
Sbjct: 126 -MGIDKS-DSSTSFWKSDAYLPTAVALFS-APSNTQVPTNVVETKIAAQVSSKSAWAVTN 182

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
            F            + ++   A   + +      D          +    +  I+  +  
Sbjct: 183 EFDKATFSTT----DDLKSAFAELASGQVQYVAADAII--GTYAAHSAGDDVHIVALMQQ 236

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
                  +   +T+    VS   
Sbjct: 237 AGGYGVGVSDANTDLKQAVSEAL 259


>gi|251788878|ref|YP_003003599.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247537499|gb|ACT06120.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 285

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 74/277 (26%), Gaps = 37/277 (13%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   +  + +     +  A      K+   +          +      G   GF+
Sbjct: 1   MKKSRFFQSVMAVCVVSAVAAFCAG--AQAKEWKSVTIATEGSYEPWNLTLPGGKLGGFE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            +    L   +     + + +  N       LQ+ + D++      T  R+    + F  
Sbjct: 59  PELMTILCQRM---NIQCKLVVQNWDGMMAGLQAGKFDVMMDAIVITPERK--QVVDFSL 113

Query: 121 ITYFDGQGFIMHK----------KKGISSVSQ--------------LSGASICVQAGTTT 156
                   FI  K          K  I   +               L G +I + +GT  
Sbjct: 114 PYASTPASFITVKGKLALPVEADKAMIKLANDPAQIKPAVAGLRGALQGKTIGIASGTVY 173

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS---E 213
              +  YF+          +    +     +A R DA   D++   ++    +  +    
Sbjct: 174 TPFIDSYFR---DVATVREYTASADAILDLQAGRIDAVFDDVTFATSILSKPENSNLTLG 230

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              L   I     A    + D E            + 
Sbjct: 231 GPQLAGPIWGEGEALGFRKSDPELKAKFDAAIKTALA 267


>gi|239905574|ref|YP_002952313.1| putative signaling protein [Desulfovibrio magneticus RS-1]
 gi|239795438|dbj|BAH74427.1| putative signaling protein [Desulfovibrio magneticus RS-1]
          Length = 629

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 84/275 (30%), Gaps = 20/275 (7%)

Query: 1   MYKD--FFVSILCLIILFFT------SFSTNASILGDIKKRG-------FLKCGINTGLV 45
           M+K   FF   L +   F        +  T    L   ++          L  G+     
Sbjct: 1   MFKKVHFFTLTLLIATTFSATTLREIAHGTEIQTLKLTQEEKQFLIEHPKLSMGVGIAFP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F  V+ +  ++GF+     A +  + +    + + P+       AL+  +   +     
Sbjct: 61  PFQFVENS--YRGFEFKGIAADTIRLLEKRLGVTFEPVFNITFDRALELGREGKIDVFPC 118

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYF 164
            +   E +  L++           I       I SV  L+G  +      +T   + + F
Sbjct: 119 ISWTPERADFLSYTSPYLSYPLVIISRSDGPFIGSVKDLNGLKVAEVKTLSTYSKVKNEF 178

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
               +       +  E +  A    +  A   D++    L       +  V  P     +
Sbjct: 179 PE--VTLDYQFEQDTESMLEAVSLGKAQACIVDLAVASYLINKRGLSNLKVAAPTPWGDN 236

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            LA A          I+     ++   EE  I QK
Sbjct: 237 KLAMATPNSMPILKRILQKGLDSITPEEENLIRQK 271


>gi|257790965|ref|YP_003181571.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
 gi|257474862|gb|ACV55182.1| extracellular solute-binding protein family 3 [Eggerthella lenta
           DSM 2243]
          Length = 335

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 71/263 (26%), Gaps = 33/263 (12%)

Query: 1   MYKD-------FFVSILCLIILFFTSFSTNAS--------ILG--DIKKRGFLKCGINTG 43
           M +          V+ +  +++  T  S+  S         L    I K G L+ G+NT 
Sbjct: 1   MKRYKTLASCCMAVACMAALLVVLTGCSSQQSYTPPEKTPTLSSPTIGKDGTLRVGVNTD 60

Query: 44  LVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102
                 +  ++    G DVD   AL+ +       +        +   AL+   +DI+  
Sbjct: 61  NQPLAGQPSSSSKIVGIDVDVAAALADSFGLKLEVVNV----GSDAESALKEGTVDIV-- 114

Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162
                   + S                           + +    I  Q  + +   + +
Sbjct: 115 -MGIDKS-DSSTSFWKSDAYLPTAVALFS-APSNTQVPTNVVETKIAAQVSSKSAWAVTN 171

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222
            F            + ++   A   + +      D          +    +  I+  +  
Sbjct: 172 EFDKATFSTT----DDLKSAFAELASGQVQYVAADAII--GTYAAHSAGDDVHIVALMQQ 225

Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245
                  +   +T+    VS   
Sbjct: 226 AGGYGVGVSDANTDLKQAVSEAL 248


>gi|115358252|ref|YP_775390.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD]
 gi|115283540|gb|ABI89056.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 335

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 62/233 (26%), Gaps = 20/233 (8%)

Query: 24  ASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A     I  RG L   +       F     NG   G D+D    L+  +       +   
Sbjct: 94  APEFARIVTRGTLVVAVLGVDQPPF-FWSRNGALAGVDIDLADELAKKLGVAVQFDRDAR 152

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI----- 137
               +    L + Q D+       TL R  +  ++F        +  ++++         
Sbjct: 153 -TFDDVVHLLATGQADVAISKLSRTLPR--AQVVSFSTPYISLRRALLINRVSFAELAKG 209

Query: 138 ----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 V    G +I V A +     + + F A         +        A  A    A
Sbjct: 210 RPLPEVVRDYRG-TIGVVARSAYAEYVRNDFPAA----QVRTYPSWPATLDALNAGAVTA 264

Query: 194 YT-GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +++    ++     P    +         LA  +          V+   
Sbjct: 265 VYRDELAIKLVMQDDPSAPIRLRVATFDDLTDALAVGVPVSAPTLLAFVNQFL 317


>gi|94497936|ref|ZP_01304501.1| extracellular solute-binding protein, family 3 [Sphingomonas sp.
           SKA58]
 gi|94422664|gb|EAT07700.1| extracellular solute-binding protein, family 3 [Sphingomonas sp.
           SKA58]
          Length = 285

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 16/268 (5%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            + F  +      L        A+ LG ++  G L+  + +    ++  + NG   G DV
Sbjct: 4   RRAFLSTAGAAATLGLLPSRIGAAPLGKVRDTGVLRVAVYSDNRPWSW-EKNGRLTGIDV 62

Query: 62  DFCRALSSAIFDDPSKIQYL---PLNAKERFLALQSKQIDILSRNT--DWTLLR---EIS 113
           D   AL+  +       Q      ++   R    +   +  +  +        R     +
Sbjct: 63  DLANALAQKLGVRADVAQITADESVDDDLRNAVWKGGLLGFMPADIMLHVPFDRAFAARN 122

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKY 171
             +A     Y +   F             +   G  +  +  +  +  L   F    +  
Sbjct: 123 DQVAIVAPYYRETFQFACANGDIDCDAPPVQWKGRRLAAELDSIPDFYLIGAFG-GVLSR 181

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--- 228
             +  +       A    R D      + + A       P+       + + + L     
Sbjct: 182 DVVHHKSGTAAVDAMLDGRADGVLASRAQIEAALHDRGNPAIIRRKMPLPAFTSLGWDIG 241

Query: 229 -AIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A+ +      + V     AM T+ EL 
Sbjct: 242 MAVKENSRTLGDAVEDILAAMGTSGELA 269


>gi|237748035|ref|ZP_04578515.1| signaling protein [Oxalobacter formigenes OXCC13]
 gi|229379397|gb|EEO29488.1| signaling protein [Oxalobacter formigenes OXCC13]
          Length = 963

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   + +L   +     + +              ++ G    + GF E+  NG + G+
Sbjct: 1   MKRLLSILMLIACLFSQALAENVPGPT---------IRVGFPP-IPGFNEINKNGTYSGY 50

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + D+ R ++           ++     +    L+  +IDIL    + T  RE     A  
Sbjct: 51  NADYLRKIAQQTNWKYE---FVVAPWSDCLKMLKEGKIDIL-GGMERTPEREKIFHFARL 106

Query: 120 PITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                D              +++++    ++ V   +    +L  Y  A+ + +    ++
Sbjct: 107 ESFLNDVSLLARADDTRFLHNNLNEYHNLTVGVLKESQDIESLKKYSAANGLSFRLKEYD 166

Query: 178 RVEEIDAAYRAHRCDAYTGD 197
            +  ++ A+     D     
Sbjct: 167 SLPRLNEAFLKGEFDIILSS 186


>gi|298488261|ref|ZP_07006294.1| Transglycosylase, Slt family [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157200|gb|EFH98287.1| Transglycosylase, Slt family [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 496

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 65/240 (27%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            I   + L   +     + L  +K+ G L+         +     NG+  GF+ +  +  
Sbjct: 15  LIATGLFLMLGACVEKPTTLERVKEDGVLRVITRNSPATY-FQDRNGE-TGFEYELVKRF 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +        L+        +     + +     T  R+      F         
Sbjct: 73  ADDLGVELKIETADNLD-DLFDQMNKPGGPVLGAAGLIETPKRK--QQARFSHSYLEVTP 129

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             +    +   +    L G  I V  G+     LA     +  ++Y       V ++   
Sbjct: 130 QVVYRNGQSRPTDPGDLVGKRIVVLKGSAHAEQLAALKAQNPGLEYEESDAVEVVDLLRM 189

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + L   ++          L +   +          D    N ++   
Sbjct: 190 VDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGEA--REQRWVVAPGEDNSLLNEINAYL 247


>gi|121603648|ref|YP_980977.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120592617|gb|ABM36056.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 301

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 83/269 (30%), Gaps = 19/269 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +     +L L + +    +    S L  I+  G LK G+      F+      D KG D+
Sbjct: 21  RRTLAVLLPLALGWSAVCAQTELSDLAKIQASGVLKVGVYKNNAPFS-DGPVTDMKGLDI 79

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAK--------ERFLALQSKQIDILSRNTDWTLLREIS 113
           D  +AL+  +    + + +               R   L     D++        L + +
Sbjct: 80  DIAKALAKQLQLKLTLLPFDAGENMGDDLRNMVWRGHYLGYGPADVMMHVPVDKYLAQQN 139

Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +          Q  +        +S    L G  +  + GT T   L  +  A  +  
Sbjct: 140 RQVFIFAPYMRQTQVLLHDTAVLPSVSGSEDLKGFKLAAERGTGTASVLMAHN-AGMLMS 198

Query: 172 HPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKS-----P 225
              ++    E   A    +   A+     A   L  +  +P+   + P  +        P
Sbjct: 199 QVALYSTGVEAAKAVIDGKAAGAFVMRSQAESILSQSQSQPAHWSMSPLPLYGVPENGWP 258

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           L  A+     +    +      + ++ EL
Sbjct: 259 LGMAVKTDYKDLAQAMQKAMQELRSSGEL 287


>gi|296274331|ref|YP_003656962.1| family 3 extracellular solute-binding protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098505|gb|ADG94455.1| extracellular solute-binding protein family 3 [Arcobacter
           nitrofigilis DSM 7299]
          Length = 288

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 84/250 (33%), Gaps = 28/250 (11%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  + DIKK G +   +      ++     G  KG DVD  + ++ A+   P    +  
Sbjct: 18  HARSIEDIKKSGEIIIAVYKDFPPYSFK-EKGVAKGIDVDLGKKVAKALGVKP---VWYF 73

Query: 83  LNAKERFLA-----------LQSKQIDILSR-NTDWTLLR--EISLGLAFRPI------T 122
               E   A           +   + D++ R   D+T +R  +   G     +       
Sbjct: 74  TGFDEDLAADLRNTISRGNKVHKNRADVMFRIPYDYTYMRLTDKQTGELQNDMVTIKGPY 133

Query: 123 YFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      HKK    I+++   +  +I V+     +L L+  F    ++ +   +    
Sbjct: 134 QSEKWVIATHKKIIPKITTLGIFAYQTIGVEVDMLPDLHLS-GFARGLIRKNVKHYRNFN 192

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    ++  + DA  G  + L    L      +   + D I        +       Y  
Sbjct: 193 DAIRDFKLGKIDAIAGLKTQLE-YLLDYKNNKDKYYISDNIPMMKSKWDLATAVRSNYRA 251

Query: 241 VSWTHYAMVT 250
           +S+    ++ 
Sbjct: 252 LSYFIDGVIE 261


>gi|170693258|ref|ZP_02884418.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170141788|gb|EDT09956.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 302

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 15/197 (7%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           + +  A+    +++ G     I+      A          G D D+ + ++ A+      
Sbjct: 39  AIAAIANRYRFVRE-GLFTVAISPHGPPTATYATDARTVVGSDADYAQLIADALGLKLDI 97

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +     +       L S + D +  N   T  R+      F         GF +     I
Sbjct: 98  VPITWADWPL---GLTSGKYDAVISNVGVTEQRKE--KFDFT-TYRQGLHGFYVRTASPI 151

Query: 138 SS---VSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHR 190
                   ++G  +   +GT  E  + ++ + +            F+       A  + R
Sbjct: 152 RHIAEPKDIAGLRVITGSGTIQEKIILEWNRQNIAKGLKPVELQYFDDDAASRVALLSGR 211

Query: 191 CDAYTGDISALYALKLT 207
            D      + L      
Sbjct: 212 ADLEFNPNAPLAYDAAR 228


>gi|330830062|ref|YP_004393014.1| membrane-bound lytic murein transglycosylase F [Aeromonas veronii
           B565]
 gi|328805198|gb|AEB50397.1| Membrane-bound lytic murein transglycosylase F [Aeromonas veronii
           B565]
          Length = 483

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 7/182 (3%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           + +S L  I++RG ++ G   G    +  + +   +GFD +  +  +  +    + I   
Sbjct: 24  SPSSQLEQIRQRGEIRVGTIYG--PTSYYQRDDLAQGFDYELAQNYADWLGVKLTIIPVD 81

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
             +  +    L+  ++D+ +     T  R                +    + K   +S++
Sbjct: 82  TTD--QLVTLLKKGKLDLAAAAIMVTPERRELFRFG-PGFYQVSPKLVYRNGKPKPASLN 138

Query: 142 QLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            + G  + V AG+T E  L +  K +  + +       VEE+       + D      + 
Sbjct: 139 DIKG-KLVVAAGSTGEDLLKEMSKENPKLAWSTSDNADVEELLKQVVDGKIDYTVVQDTV 197

Query: 201 LY 202
           L 
Sbjct: 198 LA 199


>gi|312880837|ref|ZP_07740637.1| diguanylate cyclase with extracellular sensor [Aminomonas
           paucivorans DSM 12260]
 gi|310784128|gb|EFQ24526.1| diguanylate cyclase with extracellular sensor [Aminomonas
           paucivorans DSM 12260]
          Length = 648

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 11/166 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G+ T         ++G+  GF  D  R ++        K+Q++  +  +    LQ+
Sbjct: 51  VVRFGV-TEHPPVFFRDSSGEAAGFLPDLLREIAER---QNWKVQFVFAHGDKLVKMLQA 106

Query: 95  KQIDILSRNTDWTLLREISLGLA--FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152
            ++D+LS      L      G    F          F     + +SS   L G  I +Q 
Sbjct: 107 GELDLLSMAPTPRLEERFDFGKEPVFSTWY-----TFYTLPNRSLSSFQDLGGKRIGIQG 161

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           G    + L +  +        + +  + E   A    + DA   + 
Sbjct: 162 GFYALVELTEILRQTKTDARILTYPTMREAFRALLEGKVDACAAEQ 207


>gi|153827329|ref|ZP_01979996.1| ggdef family protein [Vibrio cholerae MZO-2]
 gi|149738749|gb|EDM53091.1| ggdef family protein [Vibrio cholerae MZO-2]
          Length = 461

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 84/252 (33%), Gaps = 15/252 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F+ ++    L F S S          +R  L    +     ++ +   G   G  +DF
Sbjct: 8   KLFLFLMIAWPLLFGSMSEA-------VERQTLTIANSKAWKPYSYLDEQGQPSGILIDF 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A   A   D   IQ+  ++  +   A++  + D+ +              L F     
Sbjct: 61  WLAFGEANHVD---IQFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPLL 114

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  +H+      +  L   ++ V  G        ++ +    +   I +   E + 
Sbjct: 115 TIDTQLYVHRTLLGDKLDTLLSGTMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELMM 174

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V  
Sbjct: 175 SAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVEQ 233

Query: 244 THYAMVTAEELG 255
             +A +++ E  
Sbjct: 234 -GFAQLSSNEKN 244


>gi|290961304|ref|YP_003492486.1| extracellular solute-binding protein (transporter associated)
           [Streptomyces scabiei 87.22]
 gi|260650830|emb|CBG73947.1| putative extracellular solute-binding protein (transport system
           associated) [Streptomyces scabiei 87.22]
          Length = 313

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 10/176 (5%)

Query: 29  DIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
           D K  G L    +      +       + +GF+     A++  +      + +  +   +
Sbjct: 71  DTKTPGKLTVATDEPAYEPWFRKDDPKNGEGFESAVAYAVAERLGYAKQDVVWQSVPFNK 130

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLS 144
            F A  +K  D+       +  R     + F    Y   Q  +  K        S++ L 
Sbjct: 131 AF-APGAKTFDLDINQVSISDERRK--AVDFSSGYYDVRQAVVALKGSAAAKARSIADLR 187

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
              +  Q GTT+   + D  K          + + ++  +A +  + DA   D+  
Sbjct: 188 KLHLGAQVGTTSLDYIDDVVK---PSQDAAAYAKNDQAKSALKNGQIDAIVVDLPT 240


>gi|78356504|ref|YP_387953.1| cytidine deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218909|gb|ABB38258.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 396

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 78/255 (30%), Gaps = 18/255 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   +     +  +  +F   A+ L        +  G +     F+  +A G   GFD
Sbjct: 15  MVRFCALFCTVWLFCWLFAFPLQAAPL-------KVIYGFDREFPPFSFEEAQGIPTGFD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+   + D P K+   PL+  +  + L +  I  ++     T  RE+     F  
Sbjct: 68  VDLLKAV---LRDKPVKLIMRPLSWDQVLVELSAGNIT-VTSGMAKTAQRELLYR--FTE 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                 +  +  K        +L           + +  + + F       +  +F    
Sbjct: 122 RPTLPARVMLFTKNHNRVGNVRLLRGQTVSVEKGSFQQRVLEGFG----GLNVKLFNTKV 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A       AY G     Y             +   +        A+ + + E   +
Sbjct: 178 DALRALYRDEVVAYGGPERTAYYYIEKLKLGGITTVGTPLRVTDVF-YAVNREEPELLKL 236

Query: 241 VSWTHYAMVTAEELG 255
           ++     ++   E  
Sbjct: 237 INDGMLEVMRNGEYD 251


>gi|157693107|ref|YP_001487569.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681865|gb|ABV63009.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Bacillus pumilus SAFR-032]
          Length = 286

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 83/255 (32%), Gaps = 13/255 (5%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL-VGFAEVKANGDWK 57
           M +   F +  + L+ L     S+  +   D   R  +K  ++  +   F       +  
Sbjct: 1   MKQKTVFMMFGVLLLFLSLMGCSSVKTTTED--GRKIVKVALSAEVNPPFLATNDRNEPI 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+++D+   +   +        Y+    +   + + + + D+ +        RE      
Sbjct: 59  GYNIDYLNEVEKRL--PHVHFDYIFGEEESNLIGVGAGKFDMAANWFFSNPEREKRFLYP 116

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---HPI 174
             P  Y      +    K I S+  ++   +   + +    ++ + +   +        I
Sbjct: 117 KVPYGYSMTGLIVNESDKEIRSLDDMTSKKLAPVSPSGGLRSILNQYNQEHDPDISLTTI 176

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
                E       + R DA   +IS    ++      +  V +  I+SK P+   +   +
Sbjct: 177 ESPSNELNLKRVESGRSDAAFMNISTFDTIQ---KHLNLKVKVGGIVSKEPIYLVLQPSE 233

Query: 235 TEWYNIVSWTHYAMV 249
            +    +      M+
Sbjct: 234 KQLAEDLDRITQEMI 248


>gi|312961823|ref|ZP_07776321.1| periplasmic binding protein [Pseudomonas fluorescens WH6]
 gi|311284082|gb|EFQ62665.1| periplasmic binding protein [Pseudomonas fluorescens WH6]
          Length = 291

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/271 (11%), Positives = 73/271 (26%), Gaps = 29/271 (10%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F  +L L +L   +          +   G +K  +      ++     G  +G DV+ 
Sbjct: 2   RLFAYVLGLALLCCQTAQAQVRSYDQMVAAGEIKVAVYKDFAPYSFQDG-GTPRGVDVEL 60

Query: 64  CRALSSAIFD-------------DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            +AL+ A+               D     Y+   +      L    +     +       
Sbjct: 61  AQALAKALGVQLTLIWAPAGEKLDDDLRDYIWRGSPLHNQQLADLMMRAPYDHAYAQKRN 120

Query: 111 E------ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
           +        + +            +   +   ++SV+      I V+  +     L   F
Sbjct: 121 DQGELENGHVVMFGPYQNEQWQVAYDRRRLDKVASVAVFEQHPIGVEVDSVPSFYLTSVF 180

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS------EHVILP 218
               +      +  V +  AA +A   DA       +         P        +  + 
Sbjct: 181 N-GMLAGKTRHYPDVPQAFAAMKAGEVDAVMAMRGEIDWQVHEAHDPQLALAQNAYPNMG 239

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
               +  +  A+ + + +    V      ++
Sbjct: 240 QQRWE--IGMAVHESNRQLAYAVEEALEGLI 268


>gi|254193918|ref|ZP_04900350.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei S13]
 gi|169650669|gb|EDS83362.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei S13]
          Length = 403

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 157 TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 213

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 214 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 270

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 271 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 329


>gi|218510907|ref|ZP_03508785.1| nopaline ABC transporter, substrate-binding protein [Rhizobium etli
           Brasil 5]
          Length = 243

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 60/227 (26%), Gaps = 34/227 (14%)

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +   G   G+D+D    L   I     + Q++  +      AL   + D +      T 
Sbjct: 2   MIDTEGKLVGYDIDVGTELCRRI---AVECQFVSQDWDGIIPALTVGKFDAILSGMAITE 58

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVS-----------------------QLSG 145
            R  S+   F           +M     + +                          LSG
Sbjct: 59  KRRKSIA--FSRPYAGGFNQLVMRTDLQLPATDTKAKINLTSVGAEQQAILGQLRSALSG 116

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            ++ V   + +E  L + F           ++  + +     A R D    D        
Sbjct: 117 KTLGVLRSSNSEAVLNELF---GKVATIRSYDTQDNLHLDLAAGRIDGGLADYFTWRTFL 173

Query: 206 LTNDRPSEHVILPDII---SKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              D  +     P++        +   I + DT+            +
Sbjct: 174 DGKDGATAAFYGPELSGGLWGPGVGVGIRKEDTDLLAAFDKAIDDGI 220


>gi|262191053|ref|ZP_06049261.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
 gi|262033074|gb|EEY51604.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
          Length = 461

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 8   KLFLLLMIAWPLLFGSMSEA--------VERQTLTIANSKAWKPYSYLDEQGQPSGILID 59

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   I++  ++  +   A++  + D+ +              L F    
Sbjct: 60  FWLAFGEANHVD---IEFQLMDWNDSLEAVKLGKSDVQAGLI---RSPSRLAYLDFAEPL 113

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   ++ V  G        ++ +    +   I +   E +
Sbjct: 114 LTIDTQLYVHRTLLGDKLDTLLSGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 173

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 174 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 232

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 233 Q-GFAQLSSNEKN 244


>gi|224371113|ref|YP_002605277.1| sensory box histidine kinase (GGDEF domain protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223693830|gb|ACN17113.1| sensory box histidine kinase (GGDEF domain protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 1268

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 74/244 (30%), Gaps = 17/244 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++ G       F  +  +G+ +GF VD  + ++  I      +        E       
Sbjct: 592 VIRVGNEENWPPFD-LNVDGEARGFGVDLLKLVADRIGIHLEFVPDH--TWDETVTLFYD 648

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153
           K+ID+L         RE      F    Y      +  K    ++ +  L G ++ +   
Sbjct: 649 KKIDVLHS-LTRNQEREKH--ALFSLPFYSSPHVLMCRKDAPPVTDIRSLYGKTLAMPEK 705

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL-----KLTN 208
                 + DY + H+ +   I      E  +     R        + L+         + 
Sbjct: 706 ----WAVVDYLRLHHPEIKLIYTADTMEALSEVSQGRAFGTIEQEAVLHYFMKKYGFSSL 761

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
            +        ++ + S    A+     +  +++      +   E  G+  K   Q  ++ 
Sbjct: 762 KKAFTFDEFDNLGNASMY-IAVRNDWPQLMDLMDKALKTVSPGEMAGLEVKWFGQAKQNH 820

Query: 269 TNPD 272
            N  
Sbjct: 821 WNRG 824



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 80/280 (28%), Gaps = 39/280 (13%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +          F+ V   G  +GF  D+   L+       S       +        ++
Sbjct: 348 VVTVAFEDNSKPFSFVADQG-HQGFAHDYYGLLAKKTGLQFSS---EFGSWTANLDRFKA 403

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAG 153
            ++D++      +  R+      F P  Y                ++SQL G  + +   
Sbjct: 404 GKVDLIDG---ISFDRDRQSFTLFSPPYYTIPLTLFTRNEFGFYFNISQLFGRRVGIVRD 460

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISALYALKLTNDRP 211
              +  L     A   + + +     + +         DA   +         KL     
Sbjct: 461 VYFKEAL-----AGYPEINIVALADTQALMQGLSEGLVDAVIINLGDGLSTIRKLNLTNV 515

Query: 212 SEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
                +  +  +K  L   +         IV     A VTA EL   +            
Sbjct: 516 RSAGAIALEGKTKEDLRIGVRVNLPVLLTIVKKGM-AAVTASELASLRD----------- 563

Query: 271 PDVQRFLGIDKSSNIGEALGL---TKDWTYR--IIRHMGN 305
               ++L +    + G  + L    KD+     +IR +GN
Sbjct: 564 ----KWL-LPAPGSTGLRIHLTDSEKDFLVNHQVIR-VGN 597


>gi|149197352|ref|ZP_01874403.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Lentisphaera araneosa
           HTCC2155]
 gi|149139370|gb|EDM27772.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Lentisphaera araneosa
           HTCC2155]
          Length = 1182

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/262 (11%), Positives = 86/262 (32%), Gaps = 18/262 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MYK FF   + L +    +   +      +K+   L+         +      G  +G+ 
Sbjct: 2   MYKIFFFLAISLSVFSQGNLGLSNEEKEWLKQHPVLRVSNELDWAPYDF-NVKGKAQGYS 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V + + L+  +      ++   ++       L+  +   +      +   E    L +  
Sbjct: 61  VGYIKLLAERLG-----VEVEFISGYSWKQLLRMSREKKIDIIHPISYSEEREKFLHYTQ 115

Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                     + +    I  +  + G ++ +     T   + + F     + + I+ +  
Sbjct: 116 AYLETVNTLAIRQNETKIKILGDMKGKTLAMVEDYVTVQPVKEKFP----QINFIMVKTA 171

Query: 180 EEIDAAYRAHRCDAYT----GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++   A  A + DA+          ++A  +   + +  +  P+    +    A+ +   
Sbjct: 172 KDGLRAVAAGKADAFMEEVNTMDYLMHAYDIKGLKLTTQLGFPEQRQGTHY-LAVRKDWK 230

Query: 236 EWYNIVSWTHYAMVTAEELGIT 257
              +I+     ++  +EE   +
Sbjct: 231 ILKDILQKAMNSI--SEEDRYS 250


>gi|291549387|emb|CBL25649.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [Ruminococcus torques L2-14]
          Length = 282

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 55/189 (29%), Gaps = 24/189 (12%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           +  ++ L   K +  L    N     F      G+ + G D++  + L+  +  +   + 
Sbjct: 85  AVKSATLDTSKDQ--LVVATNAAFEPFEYT--KGEDYYGIDMEIAKLLADELGKE---LV 137

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              ++     L++  ++ DI          RE    + F    Y   Q  I+        
Sbjct: 138 IENMDFDAVCLSVSQQKCDIAMAGLTINEEREEY--VTFTDSYYSASQRLIVPSNVTTFD 195

Query: 140 VSQLSG------------ASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAA 185
             + +               I VQ GTT +  +   + +    +    + ++        
Sbjct: 196 DCKTADDVAAKLAETKSSDQIGVQQGTTGQYYVEGSEDWDFPGLPAKCVTYKSGSLAVQD 255

Query: 186 YRAHRCDAY 194
                    
Sbjct: 256 MLNGNIQYV 264


>gi|261212076|ref|ZP_05926362.1| transglycosylase Slt family [Vibrio sp. RC341]
 gi|260838684|gb|EEX65335.1| transglycosylase Slt family [Vibrio sp. RC341]
          Length = 526

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 23/228 (10%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  I++RG L+ G        +         G D +  R  +  +           L+
Sbjct: 33  SELEKIRERGVLRVGTLNN--PLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLS 90

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--------KKG 136
           +   F AL++ ++DI++         +        P  Y+  Q  +  K        K+ 
Sbjct: 91  S--LFPALKNGEVDIIAAGLS--QSEDRLKDFRAGPAYYYVSQQVVYKKGGWRPRNFKQL 146

Query: 137 ISSVSQLSGAS-----ICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHR 190
           +    +L   +       V   +  E TL    + + + ++H      V ++        
Sbjct: 147 VEKQQELLKDNPELAFFSVVDDSHFEHTLQAKQQKYPDFQFHVDSNSDVNDLLKKVSQGE 206

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
              +T   S   +L        E     ++    P++    + D E  
Sbjct: 207 L-LFTMADSVEVSLSQRVY--PELTAAFELTEDQPISWFTRRADDESL 251


>gi|229526858|ref|ZP_04416262.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae bv. albensis VL426]
 gi|229337016|gb|EEO02034.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae bv. albensis VL426]
          Length = 469

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 85/252 (33%), Gaps = 15/252 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F+ ++    L F S S          +R  L    +     ++ +   G   G  +DF
Sbjct: 16  KLFLFLMIAWPLLFGSMSEA-------VERQTLTIANSKAWKPYSYLDEQGQPSGILIDF 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A   A   D   IQ+  ++  +   A++  + D +      +  R     L F     
Sbjct: 69  WLAFGEANHVD---IQFQLMDWNDSLEAVKLGKAD-IQAGLIRSPSRLAY--LDFAEPLL 122

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  +H+      +  L   ++ V  G        ++ +    +   I +   E + 
Sbjct: 123 TIDTQLYVHRTLLGDKLDTLLSGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELMM 182

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V  
Sbjct: 183 SAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVEQ 241

Query: 244 THYAMVTAEELG 255
             +A +++ E  
Sbjct: 242 -GFAQLSSNEKN 252


>gi|209546303|ref|YP_002278193.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539160|gb|ACI59093.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 280

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 63/239 (26%), Gaps = 33/239 (13%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              +      +    A+G   GF+ +  + L         +   +  +      AL + +
Sbjct: 30  TITLEGAYAPWNLTNADGTLGGFEPELAKVLCERA---KIECTLVASDWDGMIPALNAGK 86

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV---------------- 140
            D++      T  R+    + F          F   K   ++                  
Sbjct: 87  FDVIMDALSITEERK--QVIDFTIPYAATPAAFATAKDSPLAKAAGTGATIKMTPGQTGV 144

Query: 141 -------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                  +   G +I +QA T     + D F           ++   + D   +  R D 
Sbjct: 145 KEIDALKAAFKGKTIGIQAATVYAKFVYDNF---GDIAEIREYKTGADRDLDLQNGRIDL 201

Query: 194 YTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
              D         + +   +     +   I        + + DT+  +  S    + + 
Sbjct: 202 GFDDAVYFANAFKSANGALDFTGPEIVGSIWGEGEGLGVRKADTDLRDKFSEAIKSALA 260


>gi|209558828|ref|YP_002285300.1| ABC transporter, substrate-binding protein [Streptococcus pyogenes
           NZ131]
 gi|209540029|gb|ACI60605.1| ABC transporter, substrate-binding protein [Streptococcus pyogenes
           NZ131]
          Length = 215

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 8/184 (4%)

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +A+      D  K+ +        F  L S +  +   N  +T  R       F    
Sbjct: 1   MAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA--KYLFSYPI 56

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE-- 180
                  ++ K   I S   + G +  V  GTT+   L D+ K H+     + F      
Sbjct: 57  GSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTLKFTNENIT 116

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239
           ++       + D    D   + A  + N        +    ++ P +     Q   +  +
Sbjct: 117 QMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFSQDQEKLQS 175

Query: 240 IVSW 243
            V+ 
Sbjct: 176 FVNK 179


>gi|238063942|ref|ZP_04608651.1| ABC amino acid transporter periplasmic amino acid-binding protein
           [Micromonospora sp. ATCC 39149]
 gi|237885753|gb|EEP74581.1| ABC amino acid transporter periplasmic amino acid-binding protein
           [Micromonospora sp. ATCC 39149]
          Length = 294

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 75/258 (29%), Gaps = 37/258 (14%)

Query: 7   VSILCLIILFFTSFSTNASILGDI----------------------KKRGFLKCGINTGL 44
              L        + +  A    DI                      +  G L    +   
Sbjct: 9   TVALAAAGTVLVAVAACAPQGDDISTTPATPAATAGPDCLKGKLPTRTPGKLTVATDDPA 68

Query: 45  --VGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101
               F      +G+  GF+     A++  +    + + +  +       A   K+ D   
Sbjct: 69  YEPWFVGNKPESGE--GFEAAVAYAVAEKLGYARADVTWTRVKFDVAI-APGPKEFDFDI 125

Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTEL 158
                T  R+    + F    Y   Q  I  K   I   +S++ L  A +  Q GTT+  
Sbjct: 126 NQFSITEERKS--AVDFTGPYYLVRQAVIAKKSAKIAGSASLADLRDAKLGAQVGTTSYQ 183

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVIL 217
            + D  K    K  P V+   ++   A +  + D    D+  A +         +    L
Sbjct: 184 AITDVIK---PKAKPQVYNSNDDAKKALQNGQIDGLVVDLPTAFFITGAEITDATVVGQL 240

Query: 218 PDIISKSPLAPAIIQGDT 235
           P + +       + +   
Sbjct: 241 PQVGTPEAFGLVLDRNSP 258


>gi|153212472|ref|ZP_01948241.1| GGDEF family protein [Vibrio cholerae 1587]
 gi|124116509|gb|EAY35329.1| GGDEF family protein [Vibrio cholerae 1587]
          Length = 469

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 84/252 (33%), Gaps = 15/252 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F+ ++    L F S S          +R  L    +     ++ +   G   G  +DF
Sbjct: 16  KLFLFLMIAWPLLFGSMSEA-------VERQTLTIANSKAWKPYSYLDEQGQPSGILIDF 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A   A   D   IQ+  ++  +   A++  + D+ +              L F     
Sbjct: 69  WLAFGEANHVD---IQFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPLL 122

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  +H+      +  L   ++ V  G        ++ +    +   I +   E + 
Sbjct: 123 TIDTQLYVHRTLLGDKLDTLLSGTMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELMM 182

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V  
Sbjct: 183 SAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVEQ 241

Query: 244 THYAMVTAEELG 255
             +A +++ E  
Sbjct: 242 -GFAQLSSNEKN 252


>gi|78062380|ref|YP_372288.1| ABC amino acid transporter, periplasmic ligand binding protein
           [Burkholderia sp. 383]
 gi|77970265|gb|ABB11644.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 311

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 14/185 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+      +          G D D+ + ++ A+      +     +       L
Sbjct: 62  GAFTVAISPHAPPVSTYATDARTVVGADPDYAQLVADALGRTLVLLPIAWADWPL---GL 118

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I+       ++G  I 
Sbjct: 119 TSGKYDAVISNVGVTEKRKE--KYDFT-TYRLGLHGFYVRTGSPIAKIAGPKDIAGLRII 175

Query: 150 VQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
             AGT+ E  L ++ K +  +       + F+       A  + R DA     ++L    
Sbjct: 176 TGAGTSQERILLEWNKRNVAQGLKPAELLYFDDDAASRVALLSGRADAELNPNASLAYEA 235

Query: 206 LTNDR 210
               +
Sbjct: 236 ARTGK 240


>gi|89093994|ref|ZP_01166938.1| sensor histidine kinase [Oceanospirillum sp. MED92]
 gi|89081668|gb|EAR60896.1| sensor histidine kinase [Oceanospirillum sp. MED92]
          Length = 468

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 85/280 (30%), Gaps = 22/280 (7%)

Query: 12  LIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           +++ FF++ S    +L       +++   ++                    G   +    
Sbjct: 1   MLLCFFSAASAAEIVLTEEEADWLQRNAVIRYAPAPNYPPIEYFDETQRHLGVTPELLDL 60

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           + + +  D         + +E   A +  ++D+L        + +    L F        
Sbjct: 61  MLAKV--DLPIRIERFNSWEEVMSATRLGKVDMLG---SVAKVPKRQAYLNFSEPYITLP 115

Query: 127 QGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
               M + +G S  S+ +LSG  + V     +   + D F         I    +     
Sbjct: 116 TVIYMRENEGYSNLSLEELSGKRVVVIEDYASADFVQDNFPE----ISLIKVPEISIGIR 171

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
                  DA      A  A  +     +   ++ +      L  A+ +   E  +I+   
Sbjct: 172 MVSYGMADAIVVSR-ATAAYYMQQHSLTNLEVVGETGMTWKLRFAVRKDWPELNSIIQKA 230

Query: 245 HYAMVTAE-----ELGITQKNINQVSKDTTNPDVQRFLGI 279
             ++  AE     E  + Q    QV       +V  ++G 
Sbjct: 231 LDSVSEAELEALIERHLKQGYATQVLSTERLKEVSVWVGA 270


>gi|167841209|ref|ZP_02467893.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia thailandensis MSMB43]
          Length = 271

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 14/184 (7%)

Query: 32  KRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
             G     I       A          G D D+ + ++ A+    + +     +      
Sbjct: 20  DDGAFTVAIAPHAPPVATFATDARTVVGADPDYAQLIADALGRRLALVPIAWADWPL--- 76

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGAS 147
            L S + D +  N   T  R+      F         GF +        I+    ++G  
Sbjct: 77  GLSSGKYDAVISNVGVTEKRKE--KFDFT-TYRLGLHGFYVRTASPIARIAGPRDVAGLR 133

Query: 148 ICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           I   +GT+ E  L ++ + +          + F+       A  + R DA     + L  
Sbjct: 134 IITASGTSQERILLEWNRRNVAQGRKPVDVLYFDDDGASRVALLSGRADAELNPNATLAY 193

Query: 204 LKLT 207
               
Sbjct: 194 QAAR 197


>gi|154505133|ref|ZP_02041871.1| hypothetical protein RUMGNA_02646 [Ruminococcus gnavus ATCC 29149]
 gi|153794612|gb|EDN77032.1| hypothetical protein RUMGNA_02646 [Ruminococcus gnavus ATCC 29149]
          Length = 264

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 6/102 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +G L    N     +   + +G   G DVD  RA+   +  D   ++ L +       +
Sbjct: 169 SKGTLVMATNAEFEPYEYHEGDG-IVGIDVDLSRAICDKMGYD---LEILDMEFDSILPS 224

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           + + + D  +        R+      F        Q  I+ K
Sbjct: 225 IAAGKADFGAAGMTVDAERQK--NADFTDTYANASQVVIVRK 264


>gi|281422145|ref|ZP_06253144.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Prevotella copri DSM 18205]
 gi|281403796|gb|EFB34476.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Prevotella copri DSM 18205]
          Length = 522

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 6/95 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+   N     F   + NG   G DVD   A+   +  D   ++ L +       ++Q+ 
Sbjct: 193 LRFATNATFEPFEYYQ-NGKIVGIDVDVANAIGDVMGVD---VEILDMEFDAIITSVQAG 248

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           + D        T  R+ ++G  F        Q  +
Sbjct: 249 KADAGIAGITVTPERKKNIG--FTDSYADVRQVIM 281


>gi|260771111|ref|ZP_05880038.1| transglycosylase Slt family [Vibrio furnissii CIP 102972]
 gi|260613708|gb|EEX38900.1| transglycosylase Slt family [Vibrio furnissii CIP 102972]
          Length = 443

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 74/230 (32%), Gaps = 12/230 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--PSKIQYLPLNAKER 88
           K +G L+  ++  L GF  V   G  KG   +        +        +Q +P+   E 
Sbjct: 2   KDKGTLRVVVSADL-GFYYV-EGGRPKGIGAELLYHFEQYLKKQSPYVHVQIIPVLRDEL 59

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
            L+++    D+   N   T  R   +  +                   IS++ QLSG  I
Sbjct: 60  ILSVERGFADLAVANLTITPHRLQQVDFSAPLTKDLQEFVITSKAAAPISTLEQLSGRQI 119

Query: 149 CVQAGTTTELTLADYFKA-HNMKYHPIVFERVEEIDAAY------RAHRCDAYTGDISAL 201
            ++  ++   ++         M    +    ++E    Y       A    A   D    
Sbjct: 120 WLRESSSYWDSIQAVNATLRAMNRPLVEVHFIDEALQDYELLEMVNAGHVAATVLDSHKA 179

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
              +   +    H  LP +     +A A+ +   +   +++     + + 
Sbjct: 180 ELWQHVMENIQVHSELP-LRENGQIAWALRKESPKLKTLINQYLKTVKSG 228


>gi|254185036|ref|ZP_04891625.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 1655]
 gi|184215628|gb|EDU12609.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 1655]
          Length = 406

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 160 TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 216

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 217 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 273

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 274 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 332


>gi|322420323|ref|YP_004199546.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. M18]
 gi|320126710|gb|ADW14270.1| PAS/PAC sensor hybrid histidine kinase [Geobacter sp. M18]
          Length = 1126

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 6/174 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++        G      +G  +GF VD    ++     +  +++Y+  +  +    ++ 
Sbjct: 32  TVRIAAFNLYPGI-FQAKDGRIQGFHVDIIAEVARR---EGWRVEYVYGDWADGMSRIRK 87

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            ++D+L+    WT  R   L     P+    G+   + ++  ++SV ++ G ++ V  G 
Sbjct: 88  GEVDLLTS-VAWTSERARFLDYGKVPLLTVWGE-LYVPRRANLNSVKEVEGKTVAVMRGD 145

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               +  +  +   +    + F   EEI  A  A R DA   + +   A +   
Sbjct: 146 FNGASFRNMVEKFGINCRFVEFGNFEEIFGAVAAGRVDAGVVNNTFGAAKQYQY 199


>gi|253996799|ref|YP_003048863.1| putative transglycosylase [Methylotenera mobilis JLW8]
 gi|253983478|gb|ACT48336.1| Lytic transglycosylase catalytic [Methylotenera mobilis JLW8]
          Length = 475

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 12/254 (4%)

Query: 2   YKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            +   +  L L+ + F            L    K+  +    + G      + ++    G
Sbjct: 8   KQWLRICALALLCVCFVGCKPKQEAERTLTIDTKKKEIVFVTHNG-PTTYYLNSDNQPAG 66

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            + D         + +      L  +  +   +L   +  I + +   T LRE    + F
Sbjct: 67  IEYDLATLFVQDYYPEYKARFLLVNSISDVIPSLLKGKAHIAAASLSITHLRE--HLVLF 124

Query: 119 RPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIV 175
                   Q  I + +      +VS + G +I V  GT+ E  LA   K ++  K+  + 
Sbjct: 125 STPYQETQQQLIFNSEINAEPDNVSDIIGKTIAVPEGTSYEEHLAVLQKKNSALKWQSVK 184

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
               E +         D    D      ++  +   S  + +        +A A+ +   
Sbjct: 185 RTNTESLIEEVADGLLDYTIADNHLAALMQNYHPNLSIAMPIGPADK---IAWAMSKNSD 241

Query: 236 EWYNIVSWTHYAMV 249
                     +  +
Sbjct: 242 RQMLANINKFFEKI 255


>gi|313499245|gb|ADR60611.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1]
          Length = 291

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 41/277 (14%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             +  +L  ++L   +          I   G LK  +      ++    +G  +G DV+ 
Sbjct: 2   RLWAVLLSGLLLCCAAAQAQVRNYDAIIAAGELKVAVYKDFAPYSFQD-HGQPRGVDVEL 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN------------TDWTLLR- 110
            +AL++A+      I             L     D + R                   R 
Sbjct: 61  AQALATALGVRLQLI------WAPPGEKLDDDLRDYIWRGSPLRHQQLADLMMRVPYDRA 114

Query: 111 -----------EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTEL 158
                      E +  + F P      Q     ++   ++SV+      I V+  +    
Sbjct: 115 YAQRRNELGELENAQVVMFGPYQQERWQVAYDRRRLASVASVAVFQQHPIGVEVDSVPSF 174

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL------YALKLTNDRPS 212
            L   F    +      +  V++  AA +A + DA       +       A        +
Sbjct: 175 YLTSVFN-GMLSARTHHYPSVQQAFAAMQAGQVDAVMAMRGEVDWQLHQAADAQLALAEN 233

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            +  L     +  +  A+ + + +    V     AM+
Sbjct: 234 AYPNLGKQAWE--IGMAVHESNRQLAYAVEEAMEAMI 268


>gi|297579923|ref|ZP_06941850.1| predicted protein [Vibrio cholerae RC385]
 gi|297535569|gb|EFH74403.1| predicted protein [Vibrio cholerae RC385]
          Length = 461

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 80/259 (30%), Gaps = 23/259 (8%)

Query: 1   MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   +  L + +L   S  ++ +AS          L          ++   + G+  G
Sbjct: 1   MNKVPLLICLTVGVLLCHSDLYAQSASTP-------HLVIATTDSWPPYSYTNSKGEPMG 53

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA- 117
             V+F +  S         +++   N ++    + + + D+       +  RE       
Sbjct: 54  VLVNFWQEYSEKTG---VSVEFKVTNWQQSLNNVLTGKADVHI-GMVRSEKREQVFDFIV 109

Query: 118 --FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F   T       ++ K      +   +   + V  G+       DY + H        
Sbjct: 110 PLFSIDTTLYFNRTLLKKFSPKDFLEGFNQHPVGVLYGSYQH----DYMQTHYPYVKLAT 165

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F   + +     A R  A+  D        L        ++    +    L PAI +G  
Sbjct: 166 FVTNQLMMEEAVAGRLKAFVADTQVTN-YFLNLGNKPGKILPVQHLYTEGLYPAIAKGSP 224

Query: 236 EWYNIVSWTHYAMVTAEEL 254
            +  +V    +A+   E+ 
Sbjct: 225 HFKELVQG--FALFNQEDK 241


>gi|253580133|ref|ZP_04857400.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848652|gb|EES76615.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39BFAA]
          Length = 268

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 6/103 (5%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           +  G L    N     +   + + D  G D D  +A+   +  +   ++   +       
Sbjct: 172 RSNGTLVMATNAEFEPYEYHEGD-DIVGIDADIAQAICDKLGYE---LKIEDMEFDSILP 227

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
           A+QS + D  +     T   +    + F        Q  I+ K
Sbjct: 228 AVQSGKADFGAAGMTVTE--DRKSSVDFTDTYADASQVIIVKK 268


>gi|206580640|ref|YP_002238289.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|206569698|gb|ACI11474.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
          Length = 297

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 89/301 (29%), Gaps = 37/301 (12%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDI------KKRGFLKCGINT 42
           M +     +L    +   +             + +   +  I       + G L   I+ 
Sbjct: 1   MNRALMTLVLSAFAMSAQAALDLRANEQPLPVTRDPQAIAKIPPGYRFVEPGTLTVAISA 60

Query: 43  -GLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
                 A + ++     G D D  R L+ ++     K++ +P   ++  L + S + D+ 
Sbjct: 61  LNSPPLALLASDNRTRIGSDPDMARLLAGSLG---LKLRLVPTAWEDWPLGIASGRYDVA 117

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTE 157
             N   T  R+      F      D   F +     I   +  + L+G  + V +GT  E
Sbjct: 118 LINIAVTEKRKE--KFDFA-TYRVDSLAFSVKSTSDIAAVNGPADLAGRKVIVGSGTNQE 174

Query: 158 LTL---ADYFKAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
             L    D  +A       P+        +   ++ R D + G  S        N +   
Sbjct: 175 RILLGWNDDNRAAGRPLAQPVYLTDDASGNLYIQSGRADIFFGPQSVAAYKAALNGQTRV 234

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273
             + P        A    +G+   + +        +   E         +  +      V
Sbjct: 235 VGLGPKKAWV---ATTTKKGNGLVFAL-QAALDGAIARGEYQQVLARWGEQGEAVAQSVV 290

Query: 274 Q 274
            
Sbjct: 291 N 291


>gi|237507492|ref|ZP_04520207.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           MSHR346]
 gi|234999697|gb|EEP49121.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           MSHR346]
          Length = 311

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 65  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 121

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 122 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPITRIAAPRDVAGLRIITAS 178

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 179 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 237


>gi|256823399|ref|YP_003147362.1| diguanylate cyclase/phosphodiesterase [Kangiella koreensis DSM
           16069]
 gi|256796938|gb|ACV27594.1| diguanylate cyclase/phosphodiesterase [Kangiella koreensis DSM
           16069]
          Length = 751

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 15/209 (7%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G +     F  + A+   +GF  D   A+S A   D + ++   +  ++    +Q+ + 
Sbjct: 45  VG-SEYYPPFESLSADKQPEGFITDIQYAMSKA---DGTNVEVKLMRWEDALQEVQNGRA 100

Query: 98  DILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           D ++        +E S    F  P  Y     FI    K + S+  + G  + V  G   
Sbjct: 101 DAVA----LIASKERSEHYDFTEPFYYVAHGLFIHTNTKEVDSLEDMQGQKVAVVKGAYA 156

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +  + +     N     ++ +   E      A    A       +   +LT        +
Sbjct: 157 KSNIEN----ANYDVELVLADSELECLELVSAKEVYACV--EVIITTKRLTEKYELNVKL 210

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
                   P A  + +G+T+    +    
Sbjct: 211 AGPPFWPRPYAFGVKKGNTKLQEELQNQL 239


>gi|163757320|ref|ZP_02164409.1| putative solute-binding component of ABC transporter [Hoeflea
           phototrophica DFL-43]
 gi|162284822|gb|EDQ35104.1| putative solute-binding component of ABC transporter [Hoeflea
           phototrophica DFL-43]
          Length = 270

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 55/207 (26%), Gaps = 13/207 (6%)

Query: 35  FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +             +    GD  G++ D    ++  +      ++Y   +      A+ 
Sbjct: 38  TVVVVTENAYPPLQFIDPKTGDQIGWEYDAMNEIAKRL---NFTVEYQNTSWDAMIQAVS 94

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASIC 149
             Q  I          R+    + F           ++     +    +S ++     + 
Sbjct: 95  DGQYQIGMTGITIKEERKE--KVDFSDPYMRSEMFMLVRGDEDRFTDAASFAEFEDGLVG 152

Query: 150 VQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            QAGTT   + + D            + E       A +    D    D +A       +
Sbjct: 153 AQAGTTPFYVAVYDMLDGDEQNPRIKLMETFGATVQALKTGDVDLVLTDGTAGKGYVEAS 212

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDT 235
           D      ++ + +          +G  
Sbjct: 213 DGG--LKLIGEAMGTEDFGFIFPKGSE 237


>gi|258624539|ref|ZP_05719481.1| extracellular solute-binding protein, family 3/GGDEF domain protein
           [Vibrio mimicus VM603]
 gi|258583192|gb|EEW07999.1| extracellular solute-binding protein, family 3/GGDEF domain protein
           [Vibrio mimicus VM603]
          Length = 463

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 80/255 (31%), Gaps = 14/255 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              + +L      F+S    A       ++  L    +     ++ +   G   G  +DF
Sbjct: 10  KLSLMLLVFCNFLFSSVVNAA-------EQQKLIIANSKAWKPYSYIDDQGKPSGILIDF 62

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A       +   I++  ++  +   A++  + D +      +  RE    L F     
Sbjct: 63  WLAFGQ---VNNVDIEFKLMDWNDSLEAVKYGKAD-IQAGLIRSPSREKY--LDFGEPLL 116

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  +H++     + QL   ++ V  G        ++ + H        +   E + 
Sbjct: 117 EIDTQLYVHQRFLGEKLGQLLAGNLDVAIGIVKGGFEQEFAQEHFPHIALTEYVNNELLM 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A      DA+  D        +  D   E +    + S   L PA+ + +    N +  
Sbjct: 177 QAVNRGELDAFIADSQVANFYIVIADGAKEFMPAQFLYSAE-LRPAVAKDNMRLLNQIDE 235

Query: 244 THYAMVTAEELGITQ 258
               + T E+  I  
Sbjct: 236 GFTRLTTNEKNRILS 250


>gi|167820590|ref|ZP_02452270.1| hypothetical protein Bpse9_36029 [Burkholderia pseudomallei 91]
          Length = 267

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 21  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 77

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 78  KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 134

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 135 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 193


>gi|163800145|ref|ZP_02194046.1| ScrB (extracellular solute binging protein) [Vibrio sp. AND4]
 gi|159175588|gb|EDP60382.1| ScrB (extracellular solute binging protein) [Vibrio sp. AND4]
          Length = 309

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 81/281 (28%), Gaps = 40/281 (14%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLK-CGINTGLVGF-AEVKAN--GDWK 57
            K     +   + L   S S +A  L D+K RG L+  G+      F + +         
Sbjct: 6   IKRIIKVL--CLGLAVVSISVSAGGLQDVKDRGVLRHIGVP--YANFVSYIDQGEMQTLT 61

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--------------QIDILSRN 103
           G DVD  +  + ++      +     N   +    Q +              + D+++  
Sbjct: 62  GLDVDIIKGFAQSLGVRYQYVPAQWNNLVGKLTGQQVEYKDAQLVFGGKRVVEGDLIANG 121

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--------------LSGASIC 149
                 R+      F    +      I      +  ++               ++G  + 
Sbjct: 122 MTILDWRKKV--FDFSDDYFPSSVWLIARTDSTLEPITPTGSVEQDISKVKTLINGREVL 179

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
               +  +  L D +        P+   R+ E+  A    + DA +  +     L     
Sbjct: 180 AMEHSCLDPNLYDLYDTGAKVILPVGKRRLNEMVPAIM--KSDAESTLLDVADTLIALEK 237

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
            P +  ++  I     +A A  +   E          ++  
Sbjct: 238 WPGKIKVIGPISETQKMAVAFRKDSPELKAAFDQYLNSIKQ 278


>gi|254301319|ref|ZP_04968763.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 406e]
 gi|157810972|gb|EDO88142.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 406e]
          Length = 409

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 163 TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 219

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 220 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 276

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 277 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 335


>gi|167908430|ref|ZP_02495635.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           NCTC 13177]
          Length = 281

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 35  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 91

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 92  KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 148

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 149 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 207


>gi|124005021|ref|ZP_01689864.1| serine/threonine protein kinases, putative [Microscilla marina ATCC
           23134]
 gi|123989699|gb|EAY29245.1| serine/threonine protein kinases, putative [Microscilla marina ATCC
           23134]
          Length = 624

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/339 (11%), Positives = 84/339 (24%), Gaps = 43/339 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKK--RGFLKCGINTGLVGFAEVKANGD 55
           M      +I C+II F  + +            +   +G +   +      F      G 
Sbjct: 1   MK--ITKAIFCIIIGFLGTVTAQTLPNDSWQKTQANGKGTITV-LWHDAKPFHYYDEAGK 57

Query: 56  WKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLR 110
             G D D      R + +          +      E + +++     I  +     T  R
Sbjct: 58  HTGIDHDLMVAMTRFVEAKYKVKLDIQWHKAQTYAEFYNSIKDGTGGIFGAAAFSITPER 117

Query: 111 EISLGLAFRPITYFDGQGFIMH-------KKKGISSVSQLSGASICVQAGTTTELTLADY 163
           +  +   F P    D +  + H           + +    +  +      TT + +L   
Sbjct: 118 KKVMR--FSPTYMPDIEIIVSHPELPTFNSIGELINSPDFTKYTAVSVKNTTFDKSLVAL 175

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-S 222
                            EI      +        +       L             +   
Sbjct: 176 KNKLAPNLSVKYVTNTHEIVQTINQNPYHFGYIHLPIYA---LALKNGLRLKRQKLLQIQ 232

Query: 223 KSPLAPAII----------------QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
           +   A                    +       +        V      ++ KN  +++ 
Sbjct: 233 REGYAVMYPLKSDWGKVIEEFFNSTEFKPLINKVTKQHVGTQVKDLIWDVSAKNNKELAL 292

Query: 267 DTTNPDVQRF-LGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            T   ++Q   L  ++       L L +   Y+++  +G
Sbjct: 293 LTKENELQSLRLKKNQLEIEQSKLRLERQAFYQVMLIVG 331


>gi|53722690|ref|YP_111675.1| hypothetical protein BPSS1670 [Burkholderia pseudomallei K96243]
 gi|167828953|ref|ZP_02460424.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 9]
 gi|226200076|ref|ZP_03795625.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|52213104|emb|CAH39143.1| putative exported protein [Burkholderia pseudomallei K96243]
 gi|225927928|gb|EEH23966.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei Pakistan 9]
          Length = 311

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 65  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 121

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 122 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 178

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 179 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 237


>gi|124382401|ref|YP_001025691.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10229]
 gi|261826782|gb|ABM99885.2| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10229]
          Length = 397

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 151 TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 207

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 208 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 264

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 265 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 323


>gi|254500609|ref|ZP_05112760.1| hypothetical protein SADFL11_645 [Labrenzia alexandrii DFL-11]
 gi|222436680|gb|EEE43359.1| hypothetical protein SADFL11_645 [Labrenzia alexandrii DFL-11]
          Length = 282

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 82/261 (31%), Gaps = 20/261 (7%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           ++     +  L  +F ++F        +       + G +     F+ + A+G   G D+
Sbjct: 14  FRPAIGVLAVLWTIFPSAFVHAEDCPDN------FRVGASDDYEPFSYIGADGKLTGLDL 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
            F + +       P   Q+L L      + L + +ID++      T  R       F   
Sbjct: 68  RFVQQILGEAGCTP---QFLDLPFPRAVVELAAGRIDMMMFA-SVTAER--QNFALFSAP 121

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGT-----TTELTLADYFKAH-NMKYHPIV 175
              +  G I+  +          G  + ++        T    L + F A+   K + I 
Sbjct: 122 YRNETAGLIIRARDQGRYPITEVGDLLKLKLLLAHDVGTYRGDLFETFMANPAAKKNIIQ 181

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD- 234
                +        R +A     +A++AL  T     +    P ++   P+     +   
Sbjct: 182 VSSSRQSLNMLVKGRINAIVETPAAVFALAETLGVRDQIAEHPFLLWSEPVHFMFSRKTV 241

Query: 235 -TEWYNIVSWTHYAMVTAEEL 254
             ++   +       V   E 
Sbjct: 242 SPDFVAQIDALLADAVQTPEY 262


>gi|197303847|ref|ZP_03168883.1| hypothetical protein RUMLAC_02586 [Ruminococcus lactaris ATCC
           29176]
 gi|197297140|gb|EDY31704.1| hypothetical protein RUMLAC_02586 [Ruminococcus lactaris ATCC
           29176]
          Length = 282

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 24/194 (12%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79
           +  ++ L   K +  L    N     F      G+ + G D++    L+  +  +   + 
Sbjct: 85  AVKSAKLDTTKDQ--LVVATNAAFEPFEYT--KGEDYYGIDMEIASLLAEKLGKE---LV 137

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              ++     L++  ++ DI          RE    + F    Y   Q  I+        
Sbjct: 138 IENMDFDAVCLSVSQQKCDIAMAGLTINEEREKY--VTFTDSYYSASQRLIVPSNDTAFD 195

Query: 140 VSQLSG------------ASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAA 185
             + +               I VQ GTT +  +   + +    +    + ++        
Sbjct: 196 DCKSADDVAAKLAELKESDKIGVQQGTTGQYYVEGSEEWDFPGLPAKCVTYKSGSLAVQD 255

Query: 186 YRAHRCDAYTGDIS 199
                 +    D +
Sbjct: 256 MLNGNINYVIIDAA 269


>gi|117926505|ref|YP_867122.1| Hpt sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
 gi|117610261|gb|ABK45716.1| amino acid-binding domain sensor hybrid histidine kinase
           [Magnetococcus sp. MC-1]
          Length = 1251

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 83/263 (31%), Gaps = 18/263 (6%)

Query: 5   FFVSILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
            +V +L L I    +   +   L        +K+ G ++  +    + + +V A G   G
Sbjct: 7   IWVLLLVLSIPGLGASLAHGEGLLSNDLQAYLKQLGKIRMCVAPDWMPYEQVDAQGRHVG 66

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
              D+ R     +F+         +       +L++ +  +    +      +    L F
Sbjct: 67  MAADYMR-----LFEQRLHTPIQLVPTASWAQSLEASRQGLCDILSLVNETPQRQAWLDF 121

Query: 119 RPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
                      ++   +   +  ++Q+ G  + +    T     A+  K ++ +   +  
Sbjct: 122 TTPYLRSPAVLVVRRDRPDRVQDIAQMRGLKLGI----TKGAVFAETVKPNHPEITHVSA 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             V+E+       + D     +    + ++ +   +  +I         L   + +G  E
Sbjct: 178 NSVDELLEMVSNGQLDGAVASLYV-ASHRIRDLGLANLIIGKVAGPPLMLRVGVRKGAPE 236

Query: 237 WYNIVSWTHYAMVTAEELGITQK 259
                      +   + + I  K
Sbjct: 237 LLQAFQAVVDGISQEDHIRIRTK 259


>gi|270635201|ref|ZP_06222058.1| Arginine-binding periplasmic protein precursor [Haemophilus
          influenzae HK1212]
 gi|270317449|gb|EFA28946.1| Arginine-binding periplasmic protein precursor [Haemophilus
          influenzae HK1212]
          Length = 83

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 17/99 (17%)

Query: 1  MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
          M K    +IL    +  ++                L   +      F    A G+  GFD
Sbjct: 1  MKKTLLTAILLGSSIAVSAQ--------------ELTFAMEPSYPPFETTNAKGEIIGFD 46

Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
          VD   A+   I    +  ++          +L++K+ D 
Sbjct: 47 VDVANAICQEI---QATCKFKSETFDSLIPSLKAKRFDA 82


>gi|167578315|ref|ZP_02371189.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis TXDOH]
          Length = 165

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%)

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +  +   I   + L+  ++    G+T E  L     A ++    ++ +   E        
Sbjct: 1   MAKRGSHIGDYADLAHKAVATVGGSTNEKALRHQLDAQHIDASVVLTKDYAEALKEVADD 60

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R  A   D   LY L+     P    ++ + +   P A  + + D  +  +V  T   ++
Sbjct: 61  RAAALALDDVLLYGLRANTSDPDTWEVVGEALQIEPYACMVRKDDPAFKRLVDGTLTRLM 120

Query: 250 TAEELG 255
            + E  
Sbjct: 121 KSGEFA 126


>gi|153831588|ref|ZP_01984255.1| ScrB [Vibrio harveyi HY01]
 gi|148872098|gb|EDL70915.1| ScrB [Vibrio harveyi HY01]
          Length = 310

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 86/274 (31%), Gaps = 34/274 (12%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLK-CGINTGLVGF-AEVKAN--GDWKGFDVD 62
           ++ L + +  F S S +A  L DIK RG L+  G+      F + +         G DVD
Sbjct: 10  MTALAIGVASFMSTSVSAGDLQDIKDRGVLRHIGVP--YANFVSYIDQGEMQTLTGLDVD 67

Query: 63  FCRALSSAIFDDPSKIQ--YLPLNAKERFLALQSKQIDILSR----------NTDWTLLR 110
             +  + ++      +   +  +  K     ++ K   ++                T+L 
Sbjct: 68  IIKGFAKSLGVRYQYVPAQWNNVVGKLTGQQVEYKDAQLVVGEKMAVEGDLIANGVTILD 127

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--------------LSGASICVQAGTTT 156
                + F    +      I      ++ ++               ++G  +     +  
Sbjct: 128 WRKNVIDFSDDYFPSAVWLIARTDSTLTPITPTGSVEQDIDKVKALINGREVLAMEHSCL 187

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +  L + +        P    R+ E+  A    + DA +  +     L      P E  +
Sbjct: 188 DPNLYNLYDTGAKVILPDGQRRLNEMVPAIM--KNDAESTLLDVADTLIALEKWPGEIKV 245

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +  I     +A A  +G  E     +    ++  
Sbjct: 246 IGPISENQKMAVAFRKGSPELKAAFNQYLNSIKQ 279


>gi|104161977|emb|CAJ75686.1| hypothetical protein mes0002 [uncultured Thermotogales bacterium]
          Length = 936

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 12/216 (5%)

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100
           +     F      G   GF+VD  R +S A+     +I+            L+S QID L
Sbjct: 41  DIDYPPFEYENERGIPVGFNVDILRGISEAL---DFEIEIELRTWTIARTTLESGQIDGL 97

Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELT 159
                ++  R+    + F              K     SS++ L  + I VQ G   +  
Sbjct: 98  L-GMYYSEGRDSL--VDFSNPHIVLHGSIFSKKLAGKFSSLNDLRESRIAVQKGDVMDEI 154

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
            ++      +    +  E  E         + DA          L        + V+  +
Sbjct: 155 ASNEL----VGSEIVRVEYPEIALRMLNEGQVDAVLLGTLQGLFLIDELS-FEDVVMSDN 209

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
              +     A+ +GD E  ++++     + +  E  
Sbjct: 210 PFVRLEYCFAVREGDRELLSLLNEGLSIISSNGENR 245


>gi|330719150|ref|ZP_08313750.1| L-cystine-binding protein [Leuconostoc fallax KCTC 3537]
          Length = 261

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 79/257 (30%), Gaps = 15/257 (5%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
            V+++ + ++     S N+     ++    +  G       FA +  NG   G D+   +
Sbjct: 17  IVAVMIIGVMVLHHTSKNSQAASGVQ---TINVGSGNDGQPFAYLDKNGQPAGMDIAVIQ 73

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+   +     K +    +       L+S +  +     +    R+          T +D
Sbjct: 74  AIDKKL--PQYKFKLTLSDFPTMITNLKSGKTSLAFYQIEKNPERQQDFKFGSVGYTIWD 131

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE--EID 183
                      +++ +   G  + V   +T + TL D +   N     +        +I 
Sbjct: 132 TLLATKKSTGVLNTFADAKGKKLYV-TNSTNQATLTDAYLKKNPNAFGVTRGTYTVEQIA 190

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               + + + Y     ++  L       +  V    +   S       + D +    V+ 
Sbjct: 191 QGLNSDQFNVYPAPKYSIDLLNRQFK--TNLVYGKAVNHSSAYPMFNKKADPKLMKAVNQ 248

Query: 244 THYAMVTAEELGITQKN 260
                  AE   + + N
Sbjct: 249 AM-----AELKKMARSN 260


>gi|254560448|ref|YP_003067543.1| hypothetical protein METDI1984 [Methylobacterium extorquens DM4]
 gi|254267726|emb|CAX23573.1| conserved hypothetical protein, periplasmic binding protein
           precursor, putative periplasmic binding protein-like II
           [Methylobacterium extorquens DM4]
          Length = 288

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 84/277 (30%), Gaps = 28/277 (10%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
            +    ++ CLI     +    A  L ++   G L+  I      F+E       +G D 
Sbjct: 5   RRRGLAALACLIATGAITGMAAARPLDEVTASGVLRVAIYDDNRPFSEA-GKASPRGIDA 63

Query: 62  DFCRALSSAIF----------DDPSKIQYLPLNAKERFLA--LQSKQIDILSRNTDWTLL 109
           D  +A++  +            +     +     +       L    + +       T  
Sbjct: 64  DIAQAIAERLKLKLDLRVVDAGENVDGDFRLNLWRGDLAGTPLADLMLHVPHDRILAT-- 121

Query: 110 REISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
              +  +      +     F  H  + +G   V  L G S+ V+  + ++  L +     
Sbjct: 122 --RNEQIFLTNPYFEQRLAFAYHRGRIEGFEGVRDLEGHSVAVEGTSASDSLLMNAEGGR 179

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-----DRPSEHVILPDIIS 222
             + +   F   +E   AY A       G  + + A          D P   V +P ++ 
Sbjct: 180 -FRGNVRHFRSFDEAAKAYLAGETPILAGTRAGIEAALAAAGAAGEDNPVVEVPIPGLVR 238

Query: 223 KS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
               L  A+     +    V     A+  A+E  +  
Sbjct: 239 TRWDLGGAVRSDSRDLAYAVGDALAAL--AQEGRLKA 273


>gi|145298612|ref|YP_001141453.1| periplasmic protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851384|gb|ABO89705.1| conserved hypothetical periplasmic protein [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 258

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 62/218 (28%), Gaps = 19/218 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      +    L F + +  +  L      G L   ++     +    + G   G  
Sbjct: 11  MKKW-----IGFAALLFAAITQASQEL------GKLHY-LSEEYKPYNYTDSAGTPTGLA 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+    +       P  I  +P         L +++ +++   T  T  R+     A   
Sbjct: 59  VELLHQVWKKTNTPPQTITIMPWARGY---YLLTQKPNVVLFATARTEARDPLFKWACPI 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                    +      ++ +      +I        E  L         +   +   R+ 
Sbjct: 116 GYAEIVLIGLAKNPLTLTKLEDAQQHTIGAVRADVGEQLL---LNNGFDEQKIMAANRLP 172

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVIL 217
           +      + R D  + + + L  L  +    P++  + 
Sbjct: 173 QALKMLTSGRVDLISTNKTTLMDLIASQQLDPAQFKVF 210


>gi|296274592|ref|YP_003657223.1| extracellular sensor-containg diguanylate cyclase [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098766|gb|ADG94716.1| diguanylate cyclase with extracellular sensor [Arcobacter
           nitrofigilis DSM 7299]
          Length = 709

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 70/240 (29%), Gaps = 16/240 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           +K G+      F+         GF+ D  + +S     +  K      N    + A ++K
Sbjct: 34  IKVGMMPDFAPFSYY-IKNTPVGFEHDILKIISKRTGLEFEK---KIDNWSIIYNAFKNK 89

Query: 96  QIDILSRNTDWTLLREISLGLAF-RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
           +ID++S     +          F           F+         +  L+G  + V    
Sbjct: 90  KIDMIS---SISYKDYRVPFTTFSSSYYDIPIMIFVRDDFGEYKGIKSLAGKKVGVLRDV 146

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT--NDRPS 212
                L      +    + + ++   E+  A    + DA   +++ +  L          
Sbjct: 147 FYIKEL-----ENIGTMNLVYYDNYTELIEALVFGKIDALIQNLTNINYLIKKNLYSNLK 201

Query: 213 EHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
               L      K  L   I   +    +IV      +   E+  +  K I  + +     
Sbjct: 202 LASELILPNTKKEDLRFGIQPNEPLLGSIVQKALDTITKKEKEDLVNKWIGSIKEYKGGH 261


>gi|222869610|gb|EEF06741.1| predicted protein [Populus trichocarpa]
          Length = 141

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 6/96 (6%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            L  G++             +  GFD+D  R  +  +  +   + + P++   +   L  
Sbjct: 34  KLVIGLDDNFPPMGFRDDKNEIVGFDIDMAREAAKRMNVE---VDFKPIDWSAKEAELVG 90

Query: 95  KQIDILSRNTDWTL---LREISLGLAFRPITYFDGQ 127
           K++D LS +   T     R      ++         
Sbjct: 91  KRVDALSSSCAPTPTSRTRPAWRARSWARRMAARPW 126


>gi|126456888|ref|YP_001076297.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1106a]
 gi|242311811|ref|ZP_04810828.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106b]
 gi|126230656|gb|ABN94069.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106a]
 gi|242135050|gb|EES21453.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 1106b]
          Length = 311

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 65  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 121

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +        I +   ++G  I   +
Sbjct: 122 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIVAPRDVAGLRIITAS 178

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 179 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 237


>gi|296106752|ref|YP_003618452.1| cystine/glutamine-binding periplasmic protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|295648653|gb|ADG24500.1| cystine/glutamine-binding periplasmic protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 222

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 12/209 (5%)

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
             F     +    GFD D  + +   +     +I+Y   N  + FL L +K+ D++   T
Sbjct: 8   PPFDIEPGD----GFDGDLIKEICRILNLQLVQIKYEGENFNDIFLGLANKEYDVVISGT 63

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLAD 162
             T  R  S  + F        QG  ++ +    +SS   L G    +Q G T++    D
Sbjct: 64  TITPNR--SKQVLFSNPYLEFNQGIAVNTELKPNVSSFEDLKGLVAGIQKGNTSDEVAQD 121

Query: 163 YFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221
             + +   +     +  +E       A +          +  L           +     
Sbjct: 122 LLRKNILSEIKYYAYNEIELAIQDLSAGKIGLVIKLYPVISCLIRNYTN---LAVPLQAE 178

Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           +   L  A+ + + +  + V+     +V 
Sbjct: 179 THEKLGIAVAKDNFKLRDKVNLILADLVQ 207


>gi|153800684|ref|ZP_01955270.1| GGDEF family protein [Vibrio cholerae MZO-3]
 gi|124123819|gb|EAY42562.1| GGDEF family protein [Vibrio cholerae MZO-3]
          Length = 469

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 16  KLFLLLMIAWPLLFGSMSEA--------VERQTLTIASSKAWKPYSYLDEQGQPSGILID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   IQ+  ++  +   A++  + D+ +              L F    
Sbjct: 68  FWLAFGEANHVD---IQFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPL 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   ++ V  G        ++ +    +   I +   E +
Sbjct: 122 LTIDTQLYVHRTLLGDKLDTLLLGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 182 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 240

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 241 Q-GFAQLSSNEKN 252


>gi|76818564|ref|YP_335893.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1710b]
 gi|254186268|ref|ZP_04892786.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|76583037|gb|ABA52511.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           1710b]
 gi|157933954|gb|EDO89624.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 406

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+      +  +P+   +  L L + 
Sbjct: 160 TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RLLALVPVAWADWPLGLSAG 216

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 217 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 273

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 274 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 332


>gi|167850425|ref|ZP_02475933.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           B7210]
          Length = 264

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 18  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 74

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +        I +   ++G  I   +
Sbjct: 75  KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIVAPRDVAGLRIITAS 131

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 132 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 190


>gi|306833704|ref|ZP_07466831.1| amino acid ABC superfamily ATP binding cassette transporter
           periplasmic amino acid-binding protein [Streptococcus
           bovis ATCC 700338]
 gi|304424474|gb|EFM27613.1| amino acid ABC superfamily ATP binding cassette transporter
           periplasmic amino acid-binding protein [Streptococcus
           bovis ATCC 700338]
          Length = 294

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 87/279 (31%), Gaps = 28/279 (10%)

Query: 2   YKDFFVS---ILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
            K + V+   ++ L+            T+ S  +S     K    L+       V +  V
Sbjct: 5   KKKWIVAGGIVVALVAATVIGRQLTGKTTASAQSSSGDSDKVT-TLQVAHTQNYVPYDYV 63

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
             NG+  GF+V   +A+   + +     +Y   + ++  + L+S + DI  +   +T  R
Sbjct: 64  DENGESDGFEVAVLKAVDKKLKNYKF--EYTGTSDEDLLIGLESGKYDIGVKGAWYTAER 121

Query: 111 -EISLGLAFRPITYFDGQGF---IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
            E  +           G         K   I S +   G  + +         + +Y K 
Sbjct: 122 AEKFVIPDEAIGASVIGFAIRKEDESKYTDIDSFANSGGKLVPISPQNAQYNVIQEYNKT 181

Query: 167 HNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
                  I  E     +  A     R DAY       +   + ++  + H     +    
Sbjct: 182 AKNPIELIESESFSVADAYAWVLEGRYDAYFSIK-LSFEEAVQDEDGAYHQYADQLTWF- 239

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           P      +G   +  I          AEE     K + +
Sbjct: 240 PY-----KGIETYPLIHKNATNEAF-AEEYDKAIKGLKE 272


>gi|53716340|ref|YP_106251.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 23344]
 gi|67640782|ref|ZP_00439577.1| cystine-binding periplasmic protein FliY [Burkholderia mallei GB8
           horse 4]
 gi|121598049|ref|YP_991281.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei SAVP1]
 gi|126444792|ref|YP_001063395.1| amino acid ABC transporter periplasmic protein [Burkholderia
           pseudomallei 668]
 gi|126446664|ref|YP_001077767.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10247]
 gi|134278465|ref|ZP_01765179.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 305]
 gi|166999440|ref|ZP_02265279.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei PRL-20]
 gi|167923546|ref|ZP_02510637.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           BCC215]
 gi|217422231|ref|ZP_03453734.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 576]
 gi|254176059|ref|ZP_04882717.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 10399]
 gi|254201134|ref|ZP_04907499.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei FMH]
 gi|254205103|ref|ZP_04911456.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei JHU]
 gi|254359228|ref|ZP_04975500.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei 2002721280]
 gi|52422310|gb|AAU45880.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 23344]
 gi|121225847|gb|ABM49378.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei SAVP1]
 gi|126224283|gb|ABN87788.1| ABC-type amino acid transport/signal transduction system, domain
           protein [Burkholderia pseudomallei 668]
 gi|126239518|gb|ABO02630.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei NCTC 10247]
 gi|134250249|gb|EBA50329.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 305]
 gi|147748746|gb|EDK55821.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei FMH]
 gi|147754689|gb|EDK61753.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei JHU]
 gi|148028415|gb|EDK86375.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei 2002721280]
 gi|160697101|gb|EDP87071.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei ATCC 10399]
 gi|217394462|gb|EEC34481.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei 576]
 gi|238521565|gb|EEP85016.1| cystine-binding periplasmic protein FliY [Burkholderia mallei GB8
           horse 4]
 gi|243064502|gb|EES46688.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia mallei PRL-20]
          Length = 311

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 65  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 121

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 122 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 178

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 179 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 237


>gi|172063015|ref|YP_001810666.1| extracellular solute-binding protein [Burkholderia ambifaria
           MC40-6]
 gi|171995532|gb|ACB66450.1| extracellular solute-binding protein family 3 [Burkholderia
           ambifaria MC40-6]
          Length = 327

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 62/233 (26%), Gaps = 20/233 (8%)

Query: 24  ASILGDIKKRGFLKCGINT-GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           A     I  RG L   +       F     NG   G D+D    L+  +       +   
Sbjct: 86  APEFARIVTRGTLVVAVLGVDQPPF-FWSRNGALAGVDIDLADELAKKLGVSVQFDRDAR 144

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI----- 137
               +    L + Q D+       TL R  +  ++F        +  ++++         
Sbjct: 145 -TFDDVVHLLATGQADVAISKLSRTLPR--AQVVSFSTPYISLRRALLINRVSFAELAKG 201

Query: 138 ----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
                 V    G +I V A +     + + F A         +        A  A    A
Sbjct: 202 RPLPEVVRDYRG-TIGVVARSAYADYVRNDFPAA----QVRTYPSWSATLDALNAGAVTA 256

Query: 194 YT-GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               +++    ++     P    +         LA  +          V+   
Sbjct: 257 VYRDELAIKLVMQDDPSAPIRLRVATFDDLTDALAVGVPVSAPTLLAFVNQFL 309


>gi|257067917|ref|YP_003154172.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
 gi|256558735|gb|ACU84582.1| amino acid-binding protein [Brachybacterium faecium DSM 4810]
          Length = 298

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 70/248 (28%), Gaps = 14/248 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +       +L  ++  G +  G       ++     G+  G  V   R +   +  D 
Sbjct: 29  TSSGGDDEGDLLSRLQDAGKITVGFAGE-APYSF-DEGGEVTGATVALHREIFGELGID- 85

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             ++    +       L + Q D +S       L +     AF    +      ++ +  
Sbjct: 86  -TVEGKLTDWGSLIPGLNAGQFDAVSAGMSI--LPDRCSEAAFSEPEFQYTTALMVPEGN 142

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
                +  S     +   T      +DY K  ++    I     ++   A +A   DA+ 
Sbjct: 143 PEGLENMQSFVDSDLVVATMAGAIESDYVKELDLDS--IEVGGPQDGVDALKAGNADAFA 200

Query: 196 GDISALYALKLTNDRPSEHV--ILPDIISKSPL---APAIIQGDTEWYNIVSWTHYAMVT 250
               +L  L        +     + +I              + D+   +  +    A + 
Sbjct: 201 LTAISLNYLADNTVDGVDVTDSFVAEIDGVKQFGAGGTVFRKDDSSLLDAYNEKL-AEII 259

Query: 251 AEELGITQ 258
           A+      
Sbjct: 260 ADPERYLS 267


>gi|167743404|ref|ZP_02416178.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           14]
          Length = 251

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+      +  +P+   +  L L + 
Sbjct: 5   TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RLLALVPVAWADWPLGLSAG 61

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 62  KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 118

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 119 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 177


>gi|47094446|ref|ZP_00232127.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 4b H7858]
 gi|47017175|gb|EAL08027.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 4b H7858]
          Length = 395

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 9/185 (4%)

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSV 140
           +N      +L++ +ID++      T  R+    + F     F  Q  ++ K  K   +SV
Sbjct: 1   MNFDSLLGSLKTGKIDMIISGMSPTPERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSV 58

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           +  SG  +  Q  TT E    +      +    +  ++V ++    ++++ DA   +   
Sbjct: 59  NDFSGVKVGAQKQTTQEELAQNEL----VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPV 114

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
             A    +   +   I     SK   A A+ +G T     V+ +   +     L   QK 
Sbjct: 115 AEAYISQDKTLAMADIKFANGSKE-TAIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKE 173

Query: 261 INQVS 265
            N++ 
Sbjct: 174 ANKLM 178


>gi|239905612|ref|YP_002952351.1| putative signaling protein [Desulfovibrio magneticus RS-1]
 gi|239795476|dbj|BAH74465.1| putative signaling protein [Desulfovibrio magneticus RS-1]
          Length = 624

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 84/275 (30%), Gaps = 20/275 (7%)

Query: 1   MYKD---FFVSILCLIILFFT-----SFSTNASILGDIKKRGF-------LKCGINTGLV 45
           M K    F +++L       T     +  T    L   ++          L  G+     
Sbjct: 8   MVKKVHFFILTLLIATTFSATTFRKIAHGTERQTLNLTQEEKKFLIEHPKLSMGVGIAFP 67

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
            F  V+ +  ++GF+     A +  + +    + + P+       AL+  +   +     
Sbjct: 68  PFQFVENS--YRGFEFKGIAADTIRLLERRLGVTFEPVFNITFDRALELGREGKIDVFPC 125

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYF 164
            +   E +  L++           I       I SV  L+G  +      +T   + + F
Sbjct: 126 ISWTPERADFLSYTSPYLSYPLVIISRSDGPFIGSVKDLNGLKVAEVKTLSTYSKVKNEF 185

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
               +       +  E +  A    +  A   D++    L       +  V  P     +
Sbjct: 186 PE--VTLDYQFEQDTESMLEAVSLGKAQACIVDLAVASYLINKRGLSNLKVAAPTPWGDN 243

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            LA A          I+     ++   EE  I QK
Sbjct: 244 KLAMATPNSMPILKRILQKGLDSITPEEENLIRQK 278


>gi|24217035|ref|NP_714516.1| peptide ABC transporter periplasmic [Leptospira interrogans serovar
           Lai str. 56601]
 gi|45659293|ref|YP_003379.1| cystine-binding periplasmic protein precursor [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|24198444|gb|AAN51534.1| ABC-type peptide transport system periplasmic component [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45602539|gb|AAS72016.1| cystine-binding periplasmic protein precursor [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 282

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 81/264 (30%), Gaps = 29/264 (10%)

Query: 1   MY-KDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+ K+FF  +L  +        +  + S L  I  +  L  G+N     F        + 
Sbjct: 1   MFEKNFFYLLLIFVFSSGLFSQSEYSGSRLEKILSKKELIVGVNKQYEPFYIENPKDGYP 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G D +  +  +  +      I       ++    ++  +ID+        L R     + 
Sbjct: 61  GIDAELAKLYADYLGVSLKLIPMK--TFRQFSEDIRVGKIDLALAGISTDLNR--GKQVT 116

Query: 118 FRPIT-YFDGQGFIMHKKKG------------ISSVSQLSG----ASICVQAGTTTELTL 160
           F          G +  K                 S++ L       S  V++ TT  + L
Sbjct: 117 FSDPYLVTTPAGLVSKKILPPEPEGNIVTSRRFISLNDLFTLSGLVSFSVRSNTTNHIYL 176

Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPD 219
              F     K     +           ++    +  D   +  L   N      ++ L  
Sbjct: 177 QKKF----SKLPIYSYLSDSIAVDNLISNNVTCFVADSFFILTLLQKNPSLRANYLPLLG 232

Query: 220 IISKSPLAPAIIQGDTEWYNIVSW 243
            + +  ++ A+ Q D  + + +++
Sbjct: 233 TVQEENISAALPQNDLIFADNLNF 256


>gi|296139694|ref|YP_003646937.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
 gi|296027828|gb|ADG78598.1| extracellular solute-binding protein family 3 [Tsukamurella
           paurometabola DSM 20162]
          Length = 312

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 13/154 (8%)

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            +G+  G DVD   A++ A+       +            +Q+ +  +   N   T  R 
Sbjct: 89  PDGNPVGLDVDLRNAVAKALG---ISWKQEIGTFSTIIPGVQNGRYQVGQGNFGVT--RP 143

Query: 112 ISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTL---ADYFK 165
               + F      DGQ F+         ++++  L G  I   +GTT +  L   A    
Sbjct: 144 RLDVVDFA-TYLHDGQAFVGSANSGLTEVTTLEDLCGKKIVTGSGTTFQQILEKGAQQCA 202

Query: 166 AHNMKYHPIVFERVEEIDA-AYRAHRCDAYTGDI 198
           A     + + +   +     + + +R DAY G  
Sbjct: 203 AKGKPAYAVQYLDEQGAIILSLQNNRVDAYFGPT 236


>gi|85059757|ref|YP_455459.1| putative transglycosylase [Sodalis glossinidius str. 'morsitans']
 gi|123519068|sp|Q2NS21|MLTF_SODGM RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|84780277|dbj|BAE75054.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 466

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 81/248 (32%), Gaps = 22/248 (8%)

Query: 1   MYKD----FFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +     F + ++ +++ +    +      +   L  IK RG L+          +   
Sbjct: 1   MKRFKLNYFIIGLIAILLTWSLWTTVPWRNAHQDNLAAIKARGELRISTLD--APLSYYS 58

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
            N    GFD D  +  +  +    +    +  N  + F  L++   DIL+ +  +   R 
Sbjct: 59  VNNQPSGFDYDLAQRFADYLGV--TLKVRVRSNLNQLFDDLENDNADILAASLIYNAER- 115

Query: 112 ISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
                   P  Y   Q  +    +    ++  L G  + V +G+     L    K    +
Sbjct: 116 -LNRFTVGPSYYSVSQQLVYRLGQPRPKNLGDLRG-RLAVASGSAQITQLRQLKKKQYPQ 173

Query: 171 --YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
             +          +       + D YT   SA   L        +  +  DI  + P+  
Sbjct: 174 LAWEVSSDLSSRSLLEKVADGKLD-YTLADSASVGLLQRVH--PQLAVAFDITEEKPVTW 230

Query: 229 AIIQGDTE 236
            + + D+E
Sbjct: 231 YLRRSDSE 238


>gi|210630451|ref|ZP_03296454.1| hypothetical protein COLSTE_00338 [Collinsella stercoris DSM 13279]
 gi|210160453|gb|EEA91424.1| hypothetical protein COLSTE_00338 [Collinsella stercoris DSM 13279]
          Length = 332

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 69/228 (30%), Gaps = 21/228 (9%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              D+   G L   ++T     A   A+G   G+  D  RAL+  +  D        +++
Sbjct: 52  TSDDLVNDGVLTVAMDTTDAPQAMTDADGAPSGYYADVARALAERLGLD-----LKVVSS 106

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-----GISSV 140
                A++  + DI       T + +   GLA       D      H +           
Sbjct: 107 ANASSAIEDGEADIYLG----TKIADDDEGLAVTEAIVGDASSVFAHNEDGSREAPALDA 162

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L+G+ I VQ+ + +     D      +         V E   A  +   D    D +A
Sbjct: 163 DSLAGSVIAVQSDSAS----QDALDRGGVDATLKACSNVNECFEALSSGAADYVACDATA 218

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              L            +  + +      A+   D++    V      +
Sbjct: 219 GAYLARAYPGTVFVATVGSLST---YGIAMPDVDSDLTRAVEDAMDGL 263


>gi|167616453|ref|ZP_02385085.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis Bt4]
 gi|257143001|ref|ZP_05591263.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Burkholderia
           thailandensis E264]
          Length = 165

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%)

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           +  +   I   + L+  ++    G+T E  L     A ++    ++ +   E        
Sbjct: 1   MAKRGSHIGDYADLAHKAVATVGGSTNERALRHQLDAQHIDASVVLTKDYAEALKEVADD 60

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           R  A   D   LY L+     P    ++ + +   P A  + + D  +  +V  T   ++
Sbjct: 61  RAAALALDDVLLYGLRANTSDPDTWEVVGEALQIEPYACMVRKDDPAFKRLVDGTLTRLM 120

Query: 250 TAEELG 255
            + E  
Sbjct: 121 KSGEFA 126


>gi|312136202|ref|YP_004003540.1| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)
           [Caldicellulosiruptor owensensis OL]
 gi|311776253|gb|ADQ05740.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Caldicellulosiruptor owensensis OL]
          Length = 1016

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 72/246 (29%), Gaps = 19/246 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K +F+ +  ++ L  + F   A           +K  ++     F+   + G   GF 
Sbjct: 2   MRKKYFLFVFTVLWLLISIFPVYAG-------NTVVKFEVDKNYPPFSYT-SEGRIYGFS 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    +      D   ++       + +  L   Q+D++         R+    + F  
Sbjct: 54  IDLANIVFE---PDKFDVKLSSDEWHKVYEKLVKGQVDVV-APVAILEERKKY--IYFSK 107

Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                  G    K      S+  L    I V     TE  L +             F  V
Sbjct: 108 PILTRHVGLYTKKGFSKSVSLKNLKKFKIGVLKSDYTESILKEKLNVKVYS----TFPTV 163

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E++  A    + +A            + N+      I    I  +  A  I +   E  +
Sbjct: 164 EKLIFALANGKIEAALVTQEIANYFIIKNNLSDILEIKIKNIYITKSAFGISKKRPELVS 223

Query: 240 IVSWTH 245
            +    
Sbjct: 224 YIDKRL 229


>gi|254226957|ref|ZP_04920522.1| GGDEF family protein [Vibrio cholerae V51]
 gi|125620525|gb|EAZ48894.1| GGDEF family protein [Vibrio cholerae V51]
          Length = 469

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 84/252 (33%), Gaps = 15/252 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F+ ++    L F S S          +R  L    +     ++ +   G   G  +DF
Sbjct: 16  KLFLFLMIAWPLLFGSMSEA-------VERQTLTIANSKAWKPYSYLDEQGQPSGILIDF 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A   A   D   IQ+  ++  +   A++  + D+ +              L F     
Sbjct: 69  WLAFGEANHVD---IQFQLMDWNDSLEAVKLGKSDVQAGLI---RSPSRLAYLDFAEPLL 122

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  +H+      +  L   ++ V  G        ++ +    +   I +   E + 
Sbjct: 123 TIDTQLYVHRTLLGDKLDTLLSGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELMM 182

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V  
Sbjct: 183 SAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVEQ 241

Query: 244 THYAMVTAEELG 255
             +A +++ E  
Sbjct: 242 -GFAQLSSNEKN 252


>gi|77457225|ref|YP_346730.1| lytic transglycosylase, catalytic [Pseudomonas fluorescens Pf0-1]
 gi|123605860|sp|Q3KHL5|MLTF_PSEPF RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|77381228|gb|ABA72741.1| putative transglycosylase [Pseudomonas fluorescens Pf0-1]
          Length = 486

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 70/240 (29%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            I   + L  +      + L  +K+ G L+         +     +G+  GF+ +  +  
Sbjct: 15  LIATGLFLMLSGCVDKPNTLERVKEDGVLRVVTRNSPATY-FQDRSGE-TGFEYELVKRF 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +        L+     +   +  +   +         +    + F         
Sbjct: 73  ADDLGVELKIETADNLDDLFNQVGKPNGPVLAAAGLVS---SEQRKKQVRFSRSYLEVTP 129

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             I    +   +    L G  I V  G+T    LA+  + +  ++Y       V ++   
Sbjct: 130 QIIYRNGQSRPTDAGDLVGKKIMVLKGSTHAEQLAELKQKYPGIQYEESDAVEVVDLLRM 189

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + +   ++          L D  S+S         D    N ++   
Sbjct: 190 VDEGQIDLTLVDSNEVAMNQVYFTNIRVAFDLGDARSQS--WAVAAGEDNSLLNEINSYL 247


>gi|11499355|ref|NP_070594.1| amino-acid ABC transporter, periplasmic binding protein/protein
           kinase [Archaeoglobus fulgidus DSM 4304]
 gi|2648785|gb|AAB89485.1| amino-acid ABC transporter, periplasmic binding protein/protein
           kinase [Archaeoglobus fulgidus DSM 4304]
          Length = 595

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 23/208 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++ +  LF  +  +             LK G+         V  NG+ KGF 
Sbjct: 1   MVKFKLFALITVCTLFILNPVSA------------LKVGVY-DNPPLVFV-ENGEAKGFF 46

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    ++     +   I+Y+          L+  +ID+L          E +    F  
Sbjct: 47  IDILEYIAEE---EGWSIEYVHDTFPRLLDKLERGEIDLLVD---IAYTEERAEAYKFND 100

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-RV 179
              F   G ++ K + + SV +L G  +           L       N+       E   
Sbjct: 101 EAVFTNWGVVVGK-QNLDSVLKLDGLKVAGVKRDVYTAELKRLVDEFNLNCQIFEIEGDY 159

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT 207
            E+    +A R DA         +L  +
Sbjct: 160 REVFEKVKAGRADAGVVSR-IYASLYAS 186


>gi|225352042|ref|ZP_03743065.1| hypothetical protein BIFPSEUDO_03650 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157289|gb|EEG70628.1| hypothetical protein BIFPSEUDO_03650 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 255

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 75/220 (34%), Gaps = 16/220 (7%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +  G+     G   +   G++ GFD+   + +++ +     +I +  +    R  +L+ 
Sbjct: 10  TIAIGVAADQPGLGFLHG-GEYSGFDISVAQYVANTLGFAKKQIVFKQVLPSTRVSSLED 68

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQA 152
             +D++        +++  + L             ++       I+    L+G ++CV  
Sbjct: 69  GTVDMVVDAFAADDVQDGEVEL--AGPYLTVHAALLVRSDSAGTITGTDDLAGRTVCVAK 126

Query: 153 ---GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
               + +   LA+              +   + + A    + DA   D +    L  +N 
Sbjct: 127 GGIPSYSVRNLAE-------DVTVSERDTYPQCETALMIGQADAIAADDAIAAGL-ASNR 178

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
                 ++ +   +   A A+  G +     +     +M+
Sbjct: 179 GGGYLKVVGETFGERSYAIAVKSGQSTLAKQIDAALQSMM 218


>gi|149190358|ref|ZP_01868631.1| putative glycosylase [Vibrio shilonii AK1]
 gi|148835847|gb|EDL52811.1| putative glycosylase [Vibrio shilonii AK1]
          Length = 454

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 12/243 (4%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP--SKIQYLPLN 84
           L  + ++  ++  ++  L GF  +   G  KG   +        +       K+Q +P+ 
Sbjct: 22  LDSLVEKRVIRVLVSADL-GFYYI-EKGQPKGIGAEQLYHFEKNLKKKYSKMKVQVIPVP 79

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
             +   AL +   D++  N   T  R+  +  +   ++              + SV  LS
Sbjct: 80  RDDLIPALVNGYGDLVVANLTITPKRQEIIQFSTPILSDISELIVTTSDYPSLESVEDLS 139

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV-------EEIDAAYRAHRCDAYTGD 197
           G  + V+  ++    L    +       P V+ +         E+    +     A   D
Sbjct: 140 GQEVWVRGSSSYFENLQALNQKLTSNDKPPVYVQYLEETLQDYELVEMVKQGYIGATVLD 199

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
               +    T D  + H  +P +     +A A+ +   +    V+           LG  
Sbjct: 200 SHKAFFWNKTFDDLNIHDSIP-LSKDGQIAWAMRKDSPKLEKQVNAYIKTAKQGTLLGNV 258

Query: 258 QKN 260
             N
Sbjct: 259 IYN 261


>gi|116332433|ref|YP_802151.1| substrate binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116126122|gb|ABJ77393.1| Substrate binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 280

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 83/284 (29%), Gaps = 29/284 (10%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                 L    + F+      S L  I  R  L  G+N     F        + G D + 
Sbjct: 5   RILCLFLVFPAVLFSQSEYAGSRLERILSRKELVVGVNKYYEPFYIENPKDGYPGVDAEL 64

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +  +  +      +       ++    ++  +ID+        L R     + F     
Sbjct: 65  AKLYADYLGVSLKLVPLK--TFRQFAEDIRIGKIDLAFAGISTDLNR--GKQVTFSDPYL 120

Query: 124 FDGQG----------------FIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKA 166
                                 I  +   +S ++ LSG  S  V++ TT  + L   F  
Sbjct: 121 VTTPAGLVSKKILPPEPEGNIVISRRFMSLSDLANLSGLVSFSVRSNTTNHIYLQKKF-- 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSP 225
              K     +           ++    +  D   +  L   N    + ++ L   + +  
Sbjct: 179 --SKLPIYSYLSDSIAIDNLISNNVTCFVADSFFILTLLQKNPSLKANYLPLLGTVQEEN 236

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTA---EELGITQKNINQVSK 266
           ++ A+   D  + + +++    +      EEL     N N   K
Sbjct: 237 ISAALPLNDLIFADNLNFFIKELKRTGLLEELKNRYFNQNSWVK 280


>gi|78777951|ref|YP_394266.1| lytic transglycosylase, catalytic [Sulfurimonas denitrificans DSM
           1251]
 gi|78498491|gb|ABB45031.1| Lytic transglycosylase, catalytic [Sulfurimonas denitrificans DSM
           1251]
          Length = 471

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 86/277 (31%), Gaps = 34/277 (12%)

Query: 1   MYKDFFVSILCLIILFFTSFST-------------NASILGDIKKRGFLKCGINTGLVGF 47
           M K      + L  + F +F                 S L  IKK G L   +       
Sbjct: 1   MNKYMKRGSVALFAISFFAFGWMTHALYNDAYKMIKESTLKKIKKSGALNV-VLLNAPST 59

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL---QSKQIDILSRNT 104
             + ++G  KGF+ D   + ++ +      ++     A     AL   ++  I I S + 
Sbjct: 60  YYIGSDG-PKGFEYDLLESYANHLG-----VKLNITTANTIKEALELSKNPDIHITSASL 113

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-----SVSQLSGASICVQAGTTTELT 159
             T  RE      F P  +   +  + +K   +          LSG  + V   T+   T
Sbjct: 114 TKTPEREK--EFNFGPSYFEAQEQVVCNKSLLLDGRFPSDADSLSGLRVVVGDSTSYSET 171

Query: 160 LADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
           +    K   ++          EE+ +    H  D    D +     +         V+  
Sbjct: 172 IESLKKEGFDINATYTAEYSTEELISQVDTHEIDCTIIDSNIYALNQRYFKN---IVLAF 228

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           DI ++   A  +        N +      +  + E+ 
Sbjct: 229 DISNRRQQAWILTPDSKMLKNDMYSWLNTVNQSGEMA 265


>gi|78485833|ref|YP_391758.1| lytic transglycosylase, catalytic [Thiomicrospira crunogena XCL-2]
 gi|78364119|gb|ABB42084.1| conserved hypothetical protein; predicted periplasmic or secreted
           protein [Thiomicrospira crunogena XCL-2]
          Length = 500

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 16/234 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP------SKIQY 80
           L +++KR  ++  ++     F  +   G ++G + D   A  + +   P      + + +
Sbjct: 49  LPELRKRRLIRVLVSYTRTNF-FLTPKG-FRGLEYDLLMAYEAYLNRGPRKQRYETHLTF 106

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+   +    LQ+   DI +     T  RE  +      I             + I  +
Sbjct: 107 IPMPFSDILPKLQAGYGDIAASGFTITPEREAMVDFTSPYINNVKEILVSSKDAEPIEKL 166

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHN----MKYHPI---VFERVEEIDAAYRAHRCDA 193
           +  SG  I V + ++  + L    +            +        E+I           
Sbjct: 167 ADFSGKQIIVVSNSSYIIHLEAINQTLGRLGLPTMEIVKADPLIESEDILELINEGIYQY 226

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
              D    Y  +   D    H  +  +   S +  AI + +      ++    A
Sbjct: 227 TVVDNHIAYIWQRVLDNIQLHEDMI-VHHDSNIGWAIQKNNPRLKASLNDFIQA 279


>gi|239834738|ref|ZP_04683066.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ochrobactrum intermedium LMG 3301]
 gi|239822801|gb|EEQ94370.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ochrobactrum intermedium LMG 3301]
          Length = 277

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 86/285 (30%), Gaps = 25/285 (8%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKK--RGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            +     + L  T+ + +     + K    G L   + T     + +  +G   G D D 
Sbjct: 10  LIGFAIFVGLSATALAQDCKPKHEFKTITPGTLMVAV-TTYAPHSFMDESGKMSGLDGDI 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
               +     +   ++ + ++       + S Q DI + +   T  R   + L+      
Sbjct: 69  AAEFAKR---ECLTVKPVAVDPAAAIQYVLSGQADITTGDWYRTAERAKVMNLS----YP 121

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  ++ K GI +V +L G ++    G            A+       ++     + 
Sbjct: 122 LYKDQMGLYSKDGIKTVEELVGKNVGTVQGYLWVTDAKKLLGAN-----LRLYPNSVNMH 176

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
               + R D      S            +   I  +I        A  +           
Sbjct: 177 QDLASGRIDVGIDGYSTGA---YAAKNGTLKDIKVEIAQPDERIRATREAAQASL----- 228

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS-SNIGE 287
             YA    +       NI ++ KD T   + +  G+D+S  N G 
Sbjct: 229 -PYAKSATDFGAALDANIEEMHKDGTIAKILKSYGLDESAGNTGA 272


>gi|119476396|ref|ZP_01616747.1| predicted soluble lytic transglycosylase fused to an ABC-type amino
           acid-binding protein [marine gamma proteobacterium
           HTCC2143]
 gi|119450260|gb|EAW31495.1| predicted soluble lytic transglycosylase fused to an ABC-type amino
           acid-binding protein [marine gamma proteobacterium
           HTCC2143]
          Length = 488

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I+++G LK     G    +  +      G++ +  R  S  +  +      +  + ++ F
Sbjct: 43  IREQGTLKIISRNG--PTSYFEDRNGPTGYEYELARLFSEYLGVELEVT--VVHSLEDIF 98

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI 148
           LAL+  ++ + +     T  R+    L F P      Q  +         S++ L+ + I
Sbjct: 99  LALERNEVHLAAAGLTITDERQK--RLNFSPGYLDIKQFVVYRTDSIRPKSLADLTDSKI 156

Query: 149 CVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
            + A ++ +  L     +  N+++         ++         D    D +   A +  
Sbjct: 157 MIMANSSHDEILTRLKLEHKNLQWRTATDVETIDLLDMLAEGEIDYTILDSNEYMANRGF 216

Query: 208 NDRPSEHVILPDIISKSPLAPAII---------QGDTEWYNIVSWTHYAMVTAEELGITQ 258
             R +    +        LA A+               ++  ++         E      
Sbjct: 217 YPRLNIAFEIGPPGQ---LAWAMPGEIRIPTLANDLQLFFKKINENGQLRQLEERFYSHS 273

Query: 259 KNINQVSKDTTNPDVQRFL 277
           + +N++   T N  +QR L
Sbjct: 274 EQVNRIGSLTFNQAIQRRL 292


>gi|288935855|ref|YP_003439914.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
 gi|288890564|gb|ADC58882.1| extracellular solute-binding protein family 3 [Klebsiella variicola
           At-22]
          Length = 262

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 71/253 (28%), Gaps = 20/253 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     +   + +L   +    S +     +  I     ++ G       + +      W
Sbjct: 1   MKFFTSRFMSILLLIPGMFLTQSPAQAGEEINTILPDHVIRVGAVNAPPWYQKDLLTNQW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   D  +A+     +   KI+Y+          LQS + DIL     +    E +  +
Sbjct: 61  TGLVPDVVQAIFK---NTDIKIEYVDTQWGTAVAGLQSNRFDILGG---FNNTPERAKAV 114

Query: 117 AFRPITYFDGQGFIM----HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F         G +      +K         S   +    G+     L            
Sbjct: 115 DFTRPMGSHQMGVLTLEKETQKYQRWDTINTSQTRLSAIDGSAAVTLLQPQLDKAQW--- 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I+    + +     + R DA   +   +        + +  +I+P  I +      + +
Sbjct: 172 -IIVPDSDNMQLQMESGRADAIVTNDIQMAQYIQKRHQGT--MIIPQPIKEQATNMGLRK 228

Query: 233 GDTEWYNIVSWTH 245
              E    ++   
Sbjct: 229 DRPELQAWLNGRL 241


>gi|218550121|ref|YP_002383912.1| extracellular solute-binding protein [Escherichia fergusonii ATCC
           35469]
 gi|218357662|emb|CAQ90303.1| putative bacterial extracellular solute-binding protein, family 3
           [Escherichia fergusonii ATCC 35469]
 gi|325498435|gb|EGC96294.1| extracellular solute-binding protein [Escherichia fergusonii
           ECD227]
          Length = 276

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 18/218 (8%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K +  ++ + L+       S NA+     +K   +  G +     +  +  N    GF
Sbjct: 1   MKKFNTLLNTVPLLYASVVLASFNANAFQQPEK---IIAGSDMTFYPYEYM-ENNQPAGF 56

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D++F   L+  +  D   I             LQ ++ DI + +   T  R   + +   
Sbjct: 57  DIEFLAGLAKVMGRDAVNID---TRFPNLIPGLQGERFDITNSSMYITAERLKVIDM--- 110

Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHP 173
                 G+  ++ K             G  I     T+    L    ADY   + ++   
Sbjct: 111 VPYLKSGESILVLKGSEYQPKKPEDFCGHKIGSMGATSWLAQLQKLSADYCVKNGLEPIV 170

Query: 174 I-VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +  +    +   A  +   +A   D +    +      
Sbjct: 171 LSEYATDPQTTQALLSRAVEAQITDAAVAKGVIDKLGD 208


>gi|167915705|ref|ZP_02502796.1| cystine-binding periplasmic protein FliY [Burkholderia pseudomallei
           112]
 gi|254265464|ref|ZP_04956329.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 1710a]
 gi|254216466|gb|EET05851.1| ABC transporter, periplasmic-binding protein [Burkholderia
           pseudomallei 1710a]
          Length = 311

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+      +  +P+   +  L L + 
Sbjct: 65  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RLLALVPVAWADWPLGLSAG 121

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +     I+       ++G  I   +
Sbjct: 122 KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIAAPRDVAGLRIITAS 178

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 179 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 237


>gi|71906641|ref|YP_284228.1| hypothetical protein Daro_1002 [Dechloromonas aromatica RCB]
 gi|71846262|gb|AAZ45758.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Dechloromonas aromatica RCB]
          Length = 282

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 81/265 (30%), Gaps = 26/265 (9%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   +  ++  L  + + F++    A  L  I++RG L+  +      +A         G
Sbjct: 1   MKNDRRLWLKALAALPV-FSALPAMADGLETIRQRGRLRVAVYNDFPPYAMAGGK----G 55

Query: 59  FDVDFCRALSSAIFDDPSKIQYLP--------LNAKERFLALQSKQIDILSRNTDWTLLR 110
            D D  RA++  +      + Y           N   +   L ++  D++        L 
Sbjct: 56  IDADIARAIAGKLGLMAEIVGYNADEDMNDDLRNMVWKGHYLGTQPSDVMMHVPVDEHLA 115

Query: 111 EISLGLAFRPITYFDGQGFIMH--------KKKGISSVSQLSGASICVQAGTTTELTLAD 162
             +  +    I + +      +              ++   +   I V+  +  +  L  
Sbjct: 116 RANDKVRIFGIYHRETLALARNPQRVPQALAGSAAVALEIFTREKIGVETTSLADSFLLG 175

Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDII 221
                 ++ + + F+ V E        +  A     +    ALK  +    +     ++ 
Sbjct: 176 VLNGR-LRENVVHFKSVAEAAKGMAEGKVAAVLAPRAELEAALKGQDKAVIDSPRFAELK 234

Query: 222 SKS-PLAPAIIQGDTEWYNIVSWTH 245
             + PL  A+   +      +    
Sbjct: 235 VDNWPLGMAVKVEEQALAEAIGSAL 259


>gi|90407090|ref|ZP_01215279.1| putative transglycosylase, Slt family protein [Psychromonas sp.
           CNPT3]
 gi|90311812|gb|EAS39908.1| putative transglycosylase, Slt family protein [Psychromonas sp.
           CNPT3]
          Length = 657

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 75/239 (31%), Gaps = 12/239 (5%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
           + ++ + DI+  G L  G     + ++       + GFD +  +  +  +      I+Y 
Sbjct: 26  SASTKVQDIQDNGELIIGTINSSLTYSFDGE--KYSGFDYELSKLFADKLNVPLRVIEYA 83

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
            L  K  FLAL +  +D ++     T  R         P  Y+  Q  + HK        
Sbjct: 84  NL--KMLFLALDNNDVDFIAAGLTLTPKRAEKYRS--SPPYYYTSQKVVYHKGSYRPRKI 139

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
               A I V   ++ E TL             +     +E      A +  A+     + 
Sbjct: 140 SDINAPIGVLNESSHEETLERLLNKAPDLIINVFDNDDQESLLRQIAEKELAFAIVDGST 199

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            A K              I  K+P+   I + + +      +        E+      N
Sbjct: 200 LAQKQRYY--PVLAEAFTISEKNPVVWLINRNNDDSL----YALMIEFIGEQYKNKTIN 252


>gi|294674316|ref|YP_003574932.1| amino acid ABC transporter ATP-binding protein/permease [Prevotella
           ruminicola 23]
 gi|294473716|gb|ADE83105.1| amino acid ABC transporter, ATP-binding protein/permease protein,
           His/Glu/Gln/Arg/opine family [Prevotella ruminicola 23]
          Length = 911

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 12/165 (7%)

Query: 21  STNASILGDIKKRGF---LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           S N S +   ++RG    ++      +  F  +  +G   G ++D     ++       +
Sbjct: 385 SDNPSAMDIPQQRGTGRTVRIATYPAMPPFNFIN-SGKPSGLEIDLLTEWANR---RNWQ 440

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++L ++   +  A+Q+ + D+       T  R+    + F           I  K +  
Sbjct: 441 LEFLVMDFAAQIPAVQTGKADMAMGAISITEERQK--QVLFSNGYIESHIVLITRKNEA- 497

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEE 181
            S+      S   +  T+    +           +  +  +R  +
Sbjct: 498 -SIITNPSYSSSTEHPTSPWPWMVAILVIAGCGDWFIVRRKRYSQ 541


>gi|293603165|ref|ZP_06685598.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818396|gb|EFF77444.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 283

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 20/259 (7%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD----WKGFDVDFCRAL 67
                       +  +  I+K G L+ G+            +G     W G      +  
Sbjct: 26  AGAQTAAPAPGQSPRVDAIRKAGELRVGVLQNAPWL-IQDVSGKSDEAWSGPAWLLAKEY 84

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL-AFRPITYFDG 126
           +  +    + I    ++ + +   L + Q+D+       T  R   +    +   +    
Sbjct: 85  ARQLGVKLTAIP---VSHETKVPVLAANQVDMTISPLAETADRLKVVDFVLYSATSVCMF 141

Query: 127 QGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
                 K   I SV  L   G +I    G   E  + + F         +          
Sbjct: 142 GRAGNDKLASIKSVDDLNQPGITIAYFTGGAEEAWVKERFPKAK--LRAVANSGATAPIE 199

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
              A R DA   +      L          P+E          SP+  A+ +   E+   
Sbjct: 200 EIMAKRADAAPINRVPWVGLNHKVRGLVVFPAEANCQQSTEKASPVGLAVDKNQPEYLAW 259

Query: 241 VSWTHYAM---VTAEELGI 256
           +     AM   + A+E  I
Sbjct: 260 LRQVAVAMKPQLLADETRI 278


>gi|254455556|ref|ZP_05068985.1| putative extracellular solute-binding protein, family 3 [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082558|gb|EDZ59984.1| putative extracellular solute-binding protein, family 3 [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 242

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 16/219 (7%)

Query: 28  GDIKKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
             I   G L+ G+N +  +  +   A+G   G   D  + ++  +      I++   N  
Sbjct: 7   KKIAPSGVLRVGLNMSNFLLVSSEDASGLPDGLSPDVGKKIAKELNLSCELIKFP--NPG 64

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--QLS 144
               A+   + DI     +    +E    + F          FI   +    S       
Sbjct: 65  LLADAVNDDKWDIG----NIAYEKERGKTIDFSDPYINIDANFIFRSQSNFKSNEEVDTP 120

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G  I V   +  +L L D FK        +    +EE    +R +  D   G  S L   
Sbjct: 121 GIKIAVFERSAYDLWLTDNFK----NAELVRASSIEESHNLFRNNNVDVLAGLKSKLVDE 176

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
                  ++  ++ +  +    +  I +G+ E    ++ 
Sbjct: 177 I---KTNNDFKMITNPFTYIKQSIGIKKGNPEILEFLNE 212


>gi|240849720|ref|YP_002971108.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           grahamii as4aup]
 gi|240266843|gb|ACS50431.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella
           grahamii as4aup]
          Length = 301

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 14/222 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F  +   G   G+++D  RA+ S +  +    +   +  KE    +++ 
Sbjct: 70  LRFVTTFDFPPFNFLDQTGHLAGYNIDLLRAICSKLKLEKL-CEVEAIPWKELIEHVKNG 128

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQAG 153
             +++      T   +    L F    +     F+  +   +      QL   +  V + 
Sbjct: 129 GAEVIIAGLKETS--KTQQDLVFTKSYFRFPARFVASRLLNLDEPISDQLVHLTSGVLSK 186

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PS 212
           +  E     YF     +     F++ EE+  A +  + D    D  AL            
Sbjct: 187 SIHEKLFHHYFPKAKWQG----FKKREELYKALQERKIDLIFDDGFALSLWFKKQKSVDC 242

Query: 213 EHVILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAMVT 250
            H +    ++   L      A+ + + +  +I+++   ++  
Sbjct: 243 CHFVGGAYMAPQLLGQGMQLAVAKKNEKLVDILNYALKSLEE 284


>gi|89072863|ref|ZP_01159420.1| cyclohexadienyl dehydratase [Photobacterium sp. SKA34]
 gi|89051385|gb|EAR56840.1| cyclohexadienyl dehydratase [Photobacterium sp. SKA34]
          Length = 282

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 73/280 (26%), Gaps = 24/280 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFD 60
            K F +S++   ++   S  +N      I     L            +       ++GF 
Sbjct: 9   KKLFLLSLIATPMVSNASTESNNIQFNTITDN-TLTVCTTGDYPPLTSFNSEKNTFEGFA 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
                  +  +      + +     K+    L+S + DI      +T  R     L+   
Sbjct: 68  PIVAANFAKHL---NLNLAFTRTTWKDLSDDLKSGKCDIAMGGITYTKDRSKDFYLSKSV 124

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                   F     +  +S   +     +I    G T E    +            V E 
Sbjct: 125 AKNQKAAVFTKDNDELFNSFKDIDKKENTILENKGGTNEKFANEIISKA----TINVLES 180

Query: 179 VEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +   ++ ++   Y     S     +                    L  A+I     +
Sbjct: 181 NLAVFDCFKKYQLSPYVMFTDSIEIQYRSKLPDSVLSNKG--------LGIALINNPETY 232

Query: 238 YNIVSWTHYAMVTAEELGITQKN-INQVSKDTTNPDVQRF 276
              ++       + EE+ +   N I+    +      +  
Sbjct: 233 KVYMANK---TESGEEIILAMNNFIDSNKANMKKWYQESL 269


>gi|319957355|ref|YP_004168618.1| histidine kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419759|gb|ADV46869.1| histidine kinase [Nitratifractor salsuginis DSM 16511]
          Length = 785

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 12/269 (4%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
              FF   L L +L   S   +      +KK   +          +     +G  +G  +
Sbjct: 5   KIWFFFLALILPLLAENSLHLSNQEKAFLKKHPVITVHNEMDYPPYNFY-KDGKAQGLSI 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D+   L+  +      I        E    ++  ++D++          +    L F   
Sbjct: 64  DYMNLLAKRLGVKVRYIH--GPTWSEFIKMIKEGKLDVMLNVI---YTPQRGESLHFTEP 118

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
                +         I++++ L G  +CV         L  Y+    +K  P +     +
Sbjct: 119 YASTRKAIFTEDLS-INTMNDLMGKKVCVPKDFFIHHFLETYYPEILLKTKPSLL----D 173

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNI 240
              +   +  DA     S   AL         H+  L D   +  L+ A         +I
Sbjct: 174 CLHSVENNESDATIASYSVAKALIQREKILIRHISVLTDKRMERGLSIATGPKLKMLRDI 233

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT 269
           +    Y +   E   +++K +++  ++  
Sbjct: 234 IQKAMYTIDNRELEALSKKWLDKSPQNPD 262


>gi|291519683|emb|CBK74904.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens
           16/4]
          Length = 501

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 6/99 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
             G L    N     +     NG+  G D+D  +A+   +     +++   +       A
Sbjct: 171 DNGTLVVVTNVAFPPYEYY-ENGEAVGIDMDIVKAIGDKLG---MQVKIEDIEFDSIINA 226

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           + S + D+       T  R     + F        Q  I
Sbjct: 227 VDSHKADLGIAGMTMTEER--LKSINFSNSYATSKQVII 263


>gi|307627728|gb|ADN72032.1| arginine transporter subunit ; periplasmic-binding component of ABC
           superfamily protein [Escherichia coli UM146]
          Length = 190

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 20/187 (10%)

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            C+ + +          +          +L+ ++++ +    D T  RE    + F    
Sbjct: 1   MCKEIDA-------TCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTTPY 51

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y +   F+  +    +SV QL G  + VQ GTT +  + D           + ++  +  
Sbjct: 52  YDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQNA 106

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTEWY 238
               +  R D+  GD + +       D P    +   +  K      L  A+ QG+TE  
Sbjct: 107 KLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQ 164

Query: 239 NIVSWTH 245
             ++   
Sbjct: 165 QKLNTAL 171


>gi|296271570|ref|YP_003654201.1| multi-sensor signal transduction histidine kinase [Arcobacter
           nitrofigilis DSM 7299]
 gi|296095745|gb|ADG91695.1| multi-sensor signal transduction histidine kinase [Arcobacter
           nitrofigilis DSM 7299]
          Length = 898

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 91/280 (32%), Gaps = 23/280 (8%)

Query: 1   MYKDFFVSILCLI----ILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKAN 53
           M+K F    L +     I   +++S  +    +   IK    +   ++     F+    N
Sbjct: 1   MFKIFISIYLIIFFTTNIFASSTYSNISLTFKEKEWIKNNPKVSIALSRDFPPFSYK-EN 59

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G  KG  +D    +                 +   F   +S +++ +  +  +T  RE  
Sbjct: 60  GKLKGLTIDVINKIGKLTGLTFKTESSTWTTSLNNF---KSGRVE-IISDISYTKKREAF 115

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
                +P        F + + K     + L G ++ V   T     + +  KA       
Sbjct: 116 TLFT-KPYYEIPNFIFGLKEDKSYKDKNSLIGKTLAV---TRGIFYIDEINKAGINTLEV 171

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAII 231
                  ++       + D +    +      +  +  +   ++ +   I K  L   + 
Sbjct: 172 DSVVDKPKVVIE---GKADYFVSAYTKG-IKIIKQNSLTNFKVIDEFDRIKKEDLRFGVN 227

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
             +   Y+I+       +++EEL         +S+D++N 
Sbjct: 228 PNNPLLYSIIKKALD-KISSEELNSIVNKWITISQDSSNY 266


>gi|59713468|ref|YP_206243.1| amino-acid ABC transporter binding protein [Vibrio fischeri ES114]
 gi|59481716|gb|AAW87355.1| amino-acid abc transporter binding protein [Vibrio fischeri ES114]
          Length = 472

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 80/258 (31%), Gaps = 17/258 (6%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
            + F+V +L   + F    S          L +++K+G ++  ++  L GF  +   G  
Sbjct: 5   RRVFWVLLLLPQLAFAIELSPLTQTPYVGDLKELEKKGTIRVLVSADL-GFYYI-EKGQP 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKER--FLALQSKQIDILSRNTDWTLLREISL 114
           KG   +F       +  +   +    +       F AL+    D+   N   T  R   +
Sbjct: 63  KGIIAEFLHHFELHLRKNKIHVNVQVIPIPRDDLFTALERGFGDLAVANLTITPQRLQYV 122

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKY 171
             +   I+              + S+  LSG  + V+  ++   +L    K   +  +  
Sbjct: 123 DFSDPVISNSQEWLVSSPSTPPLESLEDLSGKEVWVRPSSSYFESLQRINKQLSSQGISP 182

Query: 172 HPIVFERVE----EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             + F        E+              D              + +  LP   + + + 
Sbjct: 183 INVQFLEENLQDYELMEMLNQDILPITVIDSHKSRLWTQVMKNITIYETLPIRENAN-IG 241

Query: 228 PAIIQGDTEWYNIVSWTH 245
            A+ +   E    V+   
Sbjct: 242 WAMRKNSPELKTAVNKYI 259


>gi|291569888|dbj|BAI92160.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 990

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 13/222 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G+         +  NG   GF VD  + ++     +  ++QY+P    +    L+  
Sbjct: 17  VRVGVYENKPKV-FIDENGKPTGFWVDILKFMARR---ENWQLQYIPCEWNQCLELLEEG 72

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q+D++  +   +  R+         +     +         I+S+  L    + V AG+ 
Sbjct: 73  QLDLMV-DVAHSEERDRRFDFNQEVVLVSWSE-IYGRPGISINSIIDLHQKQVAVLAGSI 130

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +  L +  +A  ++   +     +EI         DA   +    +      +    H+
Sbjct: 131 QQSLLIEKAEAFAVQPQLVEASSFQEIFELVANGEVDAGVVNHLYGWEASSVYNLARTHI 190

Query: 216 ILPD------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           ++               A        +   +    + A   A
Sbjct: 191 LINPSRLHFVTARGENYAILAALDQ-QILEMKRDANSAYYQA 231


>gi|288904630|ref|YP_003429851.1| amino acid ABC transporter substrate binding protein [Streptococcus
           gallolyticus UCN34]
 gi|306830626|ref|ZP_07463791.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|288731355|emb|CBI12906.1| putative amino acid ABC transporter substrate binding protein
           [Streptococcus gallolyticus UCN34]
 gi|304427134|gb|EFM30241.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 274

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 5/140 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K   ++    F     N  +KG+D+D  +A+         K++++          + +
Sbjct: 33  VIKVATDSDTAPFTYK-ENDTFKGYDIDVVKAIFKD--SKKYKVEFVTTAFDSILTGVDA 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +  I + + ++   R       F              +     S+  LSG S  V +G+
Sbjct: 90  DRYQIAANDFNYNEERAE--KYLFSDPISKSNYAITSAEGTSYDSLDDLSGKSTEVISGS 147

Query: 155 TTELTLADYFKAHNMKYHPI 174
                L  +   +  K    
Sbjct: 148 NYAQVLEKWNDENPDKEPIK 167


>gi|312794722|ref|YP_004027645.1| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181862|gb|ADQ42032.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 1016

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 77/249 (30%), Gaps = 22/249 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +      ++L +II+FF S +  +           +K  ++     F+   + G   G
Sbjct: 1   MKRIRMLVNTVLAVIIIFFLSPAYASHTP--------VKFEVDKSYPPFSYT-SGGRIYG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F +D    +      D  K++       + +  L   +ID+ +      ++ E    + F
Sbjct: 52  FTIDLANLVFE---PDKFKLELSSDTWNQVYKKLVEGKIDVAAP---VAIVEERKKEVYF 105

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +    G    K      S+  L    + V     TE  L +    +        + 
Sbjct: 106 SKPIFTRHVGLYTSKGFSKNISLKNLEDFMVGVMKSDYTETLLKEKLGVNKY----YTYP 161

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            +E++  A    + DA            + N       +    I     A A+ +   E 
Sbjct: 162 TIEDLIYALVDGKIDAALMSQEIANYFLVKNGLRDRAELKIKNIFTVKSAFAVSKKRPEL 221

Query: 238 YNIVSWTHY 246
              ++    
Sbjct: 222 VAYINQRLN 230


>gi|295133744|ref|YP_003584420.1| transglycosylase [Zunongwangia profunda SM-A87]
 gi|294981759|gb|ADF52224.1| transglycosylase [Zunongwangia profunda SM-A87]
          Length = 501

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 79/270 (29%), Gaps = 37/270 (13%)

Query: 2   YKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFAE 49
           +K FFV +         S   N            +  L  IK+ G L           + 
Sbjct: 14  FKKFFVLLFLFSCFVSCSEKKNLNDGAEITPKLYSKDLSAIKEDGKLTVITIYNST--SY 71

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G   GF+ +  + L+  +  +      +  +    F  L +   D+++     T  
Sbjct: 72  FLYRGKPMGFEYELVKKLADHLELELDIK--VAKDMDHLFDMLNAGVGDLIAFGLSVTED 129

Query: 110 REISLGLAFRPITYFDGQGFIMH-------------KKKGISSVSQLSGASICVQAGTTT 156
           R+    + F    Y   Q  +               KK  I+   ++ G ++ V+  ++ 
Sbjct: 130 RKKI--VNFTEYHYLTHQVLVQRRPENWRRLPMYKIKKHTINDPIEMIGKTVHVRKNSSY 187

Query: 157 ELTLADYFKAHNMKYHPIVFERV---EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
              L +       +    +       E+I         D    D +   A       P  
Sbjct: 188 YERLENLENEIGGQIDIQLVSGNKTTEDIIKMVVDGEIDYTVSDYNI--AAINQTYNPI- 244

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             I  +I     +A ++ +   E    ++ 
Sbjct: 245 LDIDTEISFSQRIAWSVRKNSPELLAEINS 274


>gi|295698938|ref|YP_003606831.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
 gi|295438151|gb|ADG17320.1| extracellular solute-binding protein family 3 [Burkholderia sp.
           CCGE1002]
          Length = 317

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 14/182 (7%)

Query: 34  GFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           G     I+  L   A          G D D+ + ++ ++     K+  +P+   +  L L
Sbjct: 68  GNFTVAISPHLPPTATYAADARTVVGSDADYAQLIADSL---ELKLNLVPIAWADWPLGL 124

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS---VSQLSGASIC 149
            S + D +  N   T  R+      F         GF +     I        ++G  + 
Sbjct: 125 TSGKYDAVISNVGVTEQRKE--KFDFT-TYRQGLHGFYVKTASPIRKIAQPQDIAGLRLI 181

Query: 150 VQAGTTTELTLADYFKAH-NMKYHPIVFERVEE---IDAAYRAHRCDAYTGDISALYALK 205
             +GT  E  + ++ + +      P+ F+  ++      A  + R D      + L    
Sbjct: 182 TTSGTNQEKIILEWNRQNIAKGLKPVEFQYFDDDAASRIALLSGRADVVFNPNAPLAYDA 241

Query: 206 LT 207
            T
Sbjct: 242 AT 243


>gi|290508514|ref|ZP_06547885.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
 gi|289777908|gb|EFD85905.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 291

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 13/201 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   VS L L +    + +   S          ++  +N     F+ V  N +  G+D D
Sbjct: 15  KILLVSALTLAMGINAAQAVEKSPHAK-----TIEVVVNANGFPFSFVDDNNNITGYDGD 69

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + +      D +   +  ++     + L +    + + +   T  R      +  P  
Sbjct: 70  LLK-VLDQRLTDYTF-HFNAVSRDAMIVGLSTGAYTLAADHFYLTKERAEKYDHSGEPTG 127

Query: 123 YFDGQGFIMHKKKGISSVSQLSGAS------ICVQAGTTTELTLADYFKAHNMKYHPIVF 176
             D +  + + +  I ++  L+             A  T             +   P   
Sbjct: 128 ISDLRLIVRNDENDIHNLGDLASGKKKLVPIHTSDARYTVIENYNKKHPGQQINLQPNGE 187

Query: 177 ERVEEIDAAYRAHRCDAYTGD 197
           +   +I  A  +   DA    
Sbjct: 188 QSAADIFKAVASGEYDAAIYP 208


>gi|183601711|ref|ZP_02963081.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|241190791|ref|YP_002968185.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241196197|ref|YP_002969752.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183219317|gb|EDT89958.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|240249183|gb|ACS46123.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250751|gb|ACS47690.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793780|gb|ADG33315.1| solute binding protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 256

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 64/244 (26%), Gaps = 29/244 (11%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G+     G      +G++ G  V+  + ++  +     ++ +       R   L    +
Sbjct: 3   IGVPADEPGVGWY-HDGEYSGLSVEVAKYVAKVLGYGDEQLFFHSQTPATRLDRLDDGSV 61

Query: 98  DILSRN-----------TDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLS 144
           D                 D T   +                  ++       +  V  L 
Sbjct: 62  DFAMVTFAYDGGKNALEMDHTQTADG-TRYEVSGPYLVARNQLLVRADDARRLPDVQSLD 120

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G ++C  AG  +   L D     + +   +      E  A+    + DA  G    L  L
Sbjct: 121 GRTVCTVAGEYSGEQLHD----RHPRIKILQRADYSECSASLLVGQSDAIAGPQPILAGL 176

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY---------AMVTAEELG 255
           +        H+   D         A+     +   ++              A + A E  
Sbjct: 177 RKDGGTRYLHLQ-EDSYGTQAFGIAVKADQRKLMELIDTALQQMVDDGAWDAQIDAMETE 235

Query: 256 ITQK 259
           +   
Sbjct: 236 LGMH 239


>gi|84393594|ref|ZP_00992347.1| amino-acid abc transporter binding protein [Vibrio splendidus
           12B01]
 gi|84375803|gb|EAP92697.1| amino-acid abc transporter binding protein [Vibrio splendidus
           12B01]
          Length = 442

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--PSKIQYLPLN 84
           L  +K +G ++  ++  LV F  +  +G  KG   +       ++        +Q +P+ 
Sbjct: 4   LDVLKTKGTVRVLVSADLV-FYYI-EDGKPKGIVAEMLYHFEKSLRKKHPYLNVQIIPVQ 61

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
             +   +L+S   D+   N   T  R   +  +   I               I+ + QLS
Sbjct: 62  RDDLLPSLESGYGDVAVANLTITDKRLRIIDFSDPMIKDGKELIITGKNSAPITEIKQLS 121

Query: 145 GASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAY------RAHRCDAYTGD 197
           G  + ++A ++   ++    K  N     P+    +EE    Y                D
Sbjct: 122 GKEVWIRASSSYFESVQRVNKELNELDLPPLHVHFIEESLQDYELIELVNQGYIQGTILD 181

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
                      +    H  LP +     +A A+ +   +    ++    
Sbjct: 182 SHKAKLWTDVMENIQVHHDLP-LRENGQIAWALRKNSPQLKKEINKYVK 229


>gi|167724442|ref|ZP_02407678.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Burkholderia pseudomallei DM98]
          Length = 254

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 37  KCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
              I       A          G D D+ + ++ A+     ++  +P+   +  L L + 
Sbjct: 25  TVAIAPHAPPVATFATDARTVVGADPDYAQLVADALG---RRLALVPVAWADWPLGLSAG 81

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQA 152
           + D +  N   T  R+      F         GF +        I +   ++G  I   +
Sbjct: 82  KYDAVISNVGVTEQRKR--KFDFT-TYRLGLHGFYVRAASPIARIVAPRDVAGLRIITAS 138

Query: 153 GTTTELTLADYFKAHNMKY----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           GT+ E  L ++ + +  +       + F+       A  + R DA     + L      
Sbjct: 139 GTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAAR 197


>gi|310657719|ref|YP_003935440.1| hypothetical protein CLOST_0405 [Clostridium sticklandii DSM 519]
 gi|308824497|emb|CBH20535.1| exported protein of unknown function [Clostridium sticklandii]
          Length = 669

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 79/268 (29%), Gaps = 24/268 (8%)

Query: 2   YKDFFVSILCLIILFFTSFSTNAS---------ILGDIK----KRGFLKCGINTGLVGFA 48
           +K   + IL +I +  T +S N++            + K     +  +K G  T      
Sbjct: 13  FKITILLILFVIGIAGTIYSFNSNQKPEEEIFLTAEETKWLNENKDDIKIGYTTDYPPVE 72

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            +  +  + G   D+ + L   +      I+   +        ++  +   +S  T  T 
Sbjct: 73  FLDND-KYVGMSADYFKLLEKKLG-----IKINMVEFDNWDELIEQAKSRKISGITAATK 126

Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             E S  L F      +    I  K      +  +L+  S+ +      +  + ++    
Sbjct: 127 TPERSEYLDFTVPYILNPNVIITRKNFSENLTFEKLANTSMEILVVEGYD--IIEFLNER 184

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
             K      +   +          DA   +   + A          ++++          
Sbjct: 185 FPKLEYKTVKTPSDGMRMVAFGEADAMIIE--IMSASATIERDNITNLVVNVETPYESSL 242

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
               + D    + +     A ++ +E  
Sbjct: 243 SIATRNDWPMLSTIFNKGLAQISQQERK 270


>gi|206580311|ref|YP_002237385.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|206569369|gb|ACI11145.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
          Length = 291

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 13/201 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   VS L L +    + +   S          ++  +N     F+ V  N +  G+D D
Sbjct: 15  KILLVSALTLAMGINAAQAVEKSPHAK-----TIEVVVNANGFPFSFVDDNNNITGYDGD 69

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + +      D +   +  ++     + L +    + + +   T  R      +  P  
Sbjct: 70  LLK-VLDQRLTDYTF-HFNAVSRDAMIVGLSTGAYTLAADHFYLTKERAEKYDHSGEPTG 127

Query: 123 YFDGQGFIMHKKKGISSVSQLSGAS------ICVQAGTTTELTLADYFKAHNMKYHPIVF 176
             D +  + + +  I ++  L+             A  T             +   P   
Sbjct: 128 ISDLRLIVRNDENDIHNLGDLASGKKKLVPIHTSDARYTVIENYNKKHPGQQINLQPNGE 187

Query: 177 ERVEEIDAAYRAHRCDAYTGD 197
           +   +I  A  +   DA    
Sbjct: 188 QSAADIFKAVASGEYDAAIYP 208


>gi|206578984|ref|YP_002238925.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
 gi|206568042|gb|ACI09818.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Klebsiella pneumoniae 342]
          Length = 262

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 69/253 (27%), Gaps = 20/253 (7%)

Query: 1   MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M     +   + +L   +    S +     +  I     ++ G       + +      W
Sbjct: 1   MKFFTSRFMSIFLLIPGMFLAQSPAQAGEEINTILPDHVIRVGAVNAPPWYQKDLLTNQW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   D  +A+     +   KI+Y+          LQS + DIL     +    E +  +
Sbjct: 61  TGLVPDVVQAIFK---NTDIKIEYVDTQWGTAVAGLQSNRFDILGG---FNNTPERAKAV 114

Query: 117 AFRPITYFDGQGFIM----HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
            F         G +      +K         S   +    G+     L            
Sbjct: 115 DFTRPMGSHQMGVLTLEKETQKYQRWDTINTSQTRLSAIDGSAAVTLLQPQLDKAQW--- 171

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I+    + +     + R DA   +   +        + +  +  P     + +   + +
Sbjct: 172 -IIVPDSDNMQLQMESGRADAIVTNDIQMAQYIQKRHQGTMIIPQPVKEQATNMG--LRK 228

Query: 233 GDTEWYNIVSWTH 245
              E    ++   
Sbjct: 229 ERPELQAWLNGRL 241


>gi|303246341|ref|ZP_07332621.1| putative CheA signal transduction histidine kinase [Desulfovibrio
           fructosovorans JJ]
 gi|302492404|gb|EFL52276.1| putative CheA signal transduction histidine kinase [Desulfovibrio
           fructosovorans JJ]
          Length = 1070

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 67/222 (30%), Gaps = 11/222 (4%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           ++  L+  ++        +  NG + G   DF   +   +      +     +  +   A
Sbjct: 308 RKKALRFCVDPDWPPVERIDENGRYVGIGADFLHLMEKRLGVPMVLVP--TASWSQSLAA 365

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150
           ++ ++ D L      T  R     L F           +   K   I   + L+G S+ V
Sbjct: 366 VKQRRCDFLPAA-GDTNNRRRF--LRFTSPYLRFPMVVVTQAKAPFIEDPASLTGKSLGV 422

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
             G  +     D  +A       +    + E        R       + A+ +  +    
Sbjct: 423 VNGYASL----DILRAKYPGLRLMEVPSLNEGLRLVADGRLYGCIDTVPAI-SQAIAKGH 477

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
            ++  I   + +   LA A    + E  ++       +   E
Sbjct: 478 FTDLKIAGRLDAHLDLAVASRDDEPELASLFQKAVNTLTKEE 519


>gi|325977607|ref|YP_004287323.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325177535|emb|CBZ47579.1| polar amino acid ABC uptake transporter substrate binding protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 274

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 5/140 (3%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K   ++    F     N  +KG+D+D  +A+         K++++          + +
Sbjct: 33  VIKVATDSDTAPFTYK-ENDTFKGYDIDVVKAIFKD--SKKYKVEFVTTAFDSILTGVDA 89

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +  I + + ++   R       F              +     S+  LSG S  V +G+
Sbjct: 90  DRYQIAANDFNYNEERAE--KYLFSDPISKSNYAITSAEGTSYDSLDDLSGKSTEVISGS 147

Query: 155 TTELTLADYFKAHNMKYHPI 174
                L  +   +  K    
Sbjct: 148 NYAQVLEKWNDENPDKEPIK 167


>gi|256380865|ref|YP_003104525.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255925168|gb|ACU40679.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 285

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 18/224 (8%)

Query: 33  RGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            G L  G +      +         KGF+     AL+  +    + ++++ +       A
Sbjct: 48  SGKLTLGTDQPAYAPWFVDDDPASGKGFESAVAYALAEELGYAKADVEWVRVQFN---AA 104

Query: 92  LQSK--QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGA 146
           +Q      D+       T  R+    +      Y   Q  I  +      ++S+  L G 
Sbjct: 105 VQPGPKTFDLDLNQFSITDERK--QSVDMSAPYYDVAQAVIALQDSPAAAVTSLEALRGV 162

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALK 205
            I  Q GTT+     D  +         V+   ++  AA RA +  A   D  +ALY   
Sbjct: 163 KIGAQVGTTSY----DAAERLQPSQEVSVYNTNDDAKAALRAGQVQALVLDLQTALYVTS 218

Query: 206 LTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAM 248
              +       +P    K       + +G     N VS    A+
Sbjct: 219 AELEDAKIVGQIPAGDGKPEQFGAVLDKGSP-LTNCVSQAVEAL 261


>gi|163735550|ref|ZP_02142982.1| hypothetical protein RLO149_07609 [Roseobacter litoralis Och 149]
 gi|161391170|gb|EDQ15507.1| hypothetical protein RLO149_07609 [Roseobacter litoralis Och 149]
          Length = 431

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 47/145 (32%), Gaps = 12/145 (8%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     ++    +   +   +A    D++  G +   +      F+  KA+G   GF 
Sbjct: 1   MTRAVLFVLILSCAIGTFAPIAHACP--DVRPEGDIIVAMRDDARPFSYFKADGAPAGFA 58

Query: 61  VDFCRALSSAIFD-------DPSKIQYLPLNAKERFL-ALQSKQIDILSRNTDWTLLREI 112
            D  R +  ++             + ++P N  +     L S +IDI+      T  R  
Sbjct: 59  YDLWRNVERSLSVLDAEGRSVAPNVSFVPCNTIDGQEIGLVSGRIDIVIAPLTITSER-- 116

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGI 137
            L   F       G    +     I
Sbjct: 117 MLSYDFSQQYLSSGIALALPPSNAI 141


>gi|239833187|ref|ZP_04681516.1| Octopine-binding periplasmic protein precursor [Ochrobactrum
           intermedium LMG 3301]
 gi|239825454|gb|EEQ97022.1| Octopine-binding periplasmic protein precursor [Ochrobactrum
           intermedium LMG 3301]
          Length = 280

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 62/220 (28%), Gaps = 40/220 (18%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F  +  + +    S S   S          L          +   +++G   G++V+ 
Sbjct: 5   RLFNLVWIIALASSLSQSHAQSR--------VLTIATEGYFRPYNLTQSDGTLDGYEVEL 56

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            + L   +  +     ++ +       +LQ  + D +      T  RE    + F     
Sbjct: 57  GQHLCQTMKVE---CNFIAIPFDAIITSLQIGKADAVMGALSATKAREKV--IDFSVSYG 111

Query: 124 FDGQGFI------MHKKKGISSVSQL------------------SGASICVQAGTTTELT 159
              Q F         K   +     L                   GA++ V  G+  +  
Sbjct: 112 RTPQVFATLRDGPYSKLPHMEENLDLSDNKHETEQALQDVNTAIKGATVGVVGGSIAQSL 171

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           +  YF+          ++  E++D      R D      S
Sbjct: 172 INAYFRE---GTTIREYKTAEQVDLDLANGRIDMQVTARS 208


>gi|222530683|ref|YP_002574565.1| PAS/PAC sensor-domain containing diguanylate
           cyclase/phosphodiesterase [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222457530|gb|ACM61792.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 1016

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 73/249 (29%), Gaps = 20/249 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K        L++LF  S +  +           +K  ++     F+   + G   GF +D
Sbjct: 5   KAILFVFTVLLMLFHISLANASHTP--------VKFEVDKNYPPFSYT-SGGRIYGFTID 55

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
               +      D  K++       + +  L   +ID+ +         E    + F    
Sbjct: 56  LANLVFE---PDKFKLELSSDEWSQVYKKLVEGKIDVTAPVAII---EERKKEVHFSKPI 109

Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           +    G    K      S+  L    + V     TE  L +    +        +  +E+
Sbjct: 110 FTRHVGLYTSKEFSKNISLKNLEDFMVGVMQSDYTETLLKEKLGVNKY----YTYPTIED 165

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  A    + DA            + N+      +    I     A A+ +   E    +
Sbjct: 166 LIYALVDGKIDAALMSQEIANYFLVKNNLSDRAELKIKNIFTVKSAFAVSKKRPELVAYI 225

Query: 242 SWTHYAMVT 250
           +     ++ 
Sbjct: 226 NQRLNFLIN 234


>gi|160894910|ref|ZP_02075684.1| hypothetical protein CLOL250_02460 [Clostridium sp. L2-50]
 gi|156863341|gb|EDO56772.1| hypothetical protein CLOL250_02460 [Clostridium sp. L2-50]
          Length = 292

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 61/207 (29%), Gaps = 23/207 (11%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  ++ L   K +  L    N     F   K   ++ G D++  +AL+  +  +   +  
Sbjct: 95  AVESATLDSSKDQ--LVVATNAAFEPFEYTKGE-NYYGIDMEIAKALADKLGKE---LVI 148

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
             ++     L++  ++ DI          RE  +   F    Y   Q  I+         
Sbjct: 149 QNMDFDAVCLSVGQQKCDIAMAGLTIKPDREEYVA--FSDSYYKASQKLIVPSDNTEFDE 206

Query: 141 SQLSGA------------SICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAY 186
            + +               I  Q GTT +      D +    +K     ++         
Sbjct: 207 CKTADDVNAILNAKDSSSKIGFQTGTTGQFYCEGDDDWGFAGLKMTSTGYKNGSLAVQDL 266

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSE 213
                +    D SA  A    +    +
Sbjct: 267 LNGNLNYVIID-SAPAAAITKSLNAMQ 292


>gi|254510597|ref|ZP_05122664.1| extracellular solute-binding protein, family 3 [Rhodobacteraceae
           bacterium KLH11]
 gi|221534308|gb|EEE37296.1| extracellular solute-binding protein, family 3 [Rhodobacteraceae
           bacterium KLH11]
          Length = 271

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 81/263 (30%), Gaps = 17/263 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59
           M K F ++ +  + L   +++ +    G     G       N     +    A    +GF
Sbjct: 1   MTKVFSIAAMSALFLSTAAYAQDQCAAGKTLTDGKFTVATGNPAYYPWVLDDAPESGEGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLA 117
           +     A+++ +      + ++  +      A+Q      D+  +    T  R+    + 
Sbjct: 61  EAAVAYAVAAEMGFAADDVIWVRSSFD---EAIQPGAKAFDVNMQQYSITPERD--QVVD 115

Query: 118 FRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           F    Y      ++         ++  L G        TT    L            P++
Sbjct: 116 FSAPYYTAPMAVLVSPGAIDTAPTLEALKGLQWGAVGSTTAVPKLTSII---QPDSDPLL 172

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTN---DRPSEHVILPDIISKSPLAPAIIQ 232
           +    +++AA  A++ DA   D+     L        +        +  +       + +
Sbjct: 173 YGDNADVNAAMTANQIDAALFDLPTALFLSAVMIEGSKVIGQFPADESDNPDQFGMLMEE 232

Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255
           G+      V     A+  + +L 
Sbjct: 233 GNP-LKACVDEALAALTESGKLA 254


>gi|293603166|ref|ZP_06685599.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818397|gb|EFF77445.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 282

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 80/274 (29%), Gaps = 24/274 (8%)

Query: 4   DFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--- 55
             F++   L  +             ++ +  I+K G L+ G+      +     +G    
Sbjct: 13  RLFLTATMLAGVASAQAQTPPAPGESARVDAIRKAGVLRVGV-VNNPPWLVQNTSGSGEP 71

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           W G      +  +  +      +  + ++ + +  AL + Q+DI+    +    R   + 
Sbjct: 72  WMGSSWTLGKEFAQLLGVK---VVPVQVSHETKVPALIANQMDIMIGPLNENAERAKIID 128

Query: 116 L-AFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYH 172
              F   +          K    + V      G ++   +G   E  + ++F   N K  
Sbjct: 129 FVTFSSTSVCMFGLASNPKFTSATKVEDFNQPGITMAYFSGAGEEPLVREHFS--NAKLR 186

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----AP 228
            +             A R D    +      +       +      D             
Sbjct: 187 GVTNSGSVAPIEEVLAGRSDVAPLNRMLWPNISKKVKGLAVFPKENDCQDSKIFEIKAGM 246

Query: 229 AIIQGDTEWYNIVSWT---HYAMVTAEELGITQK 259
            + +    + + +       +  + AEE+ +TQ 
Sbjct: 247 GVAKNQPVYLDWLRKVEARLHPELAAEEVRMTQT 280


>gi|71733950|ref|YP_273598.1| putative transglycosylase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554503|gb|AAZ33714.1| periplasmic binding domain/transglycosylase SLT domain fusion
           protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 559

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 64/240 (26%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            I   + L   +     + L  +K+ G L+         +     NG+  GF+ +  +  
Sbjct: 78  LIATGLFLMLGACVEKPTTLERVKEDGVLRMITRNSPATY-FQDRNGE-TGFEYELVKRF 135

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +        L+        +     + +     T  R       F         
Sbjct: 136 ADDLGVELKIETADNLD-DLFDQMNKPGGPVLGAAGLIETPKR--KQQARFSHSYLEVTP 192

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             +    +   +    L G  I V  G+     LA     +  ++Y       V ++   
Sbjct: 193 QVVYRNGQSRPTDPGDLVGKRIVVLKGSAHAEQLAALKAQNPGLEYEESDAVEVVDLLRM 252

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + L   ++          L +   +          D    N ++   
Sbjct: 253 VDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGEA--REQRWVVAPGEDNSLLNEINAYL 310


>gi|117923646|ref|YP_864263.1| PAS/PAC sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
 gi|117607402|gb|ABK42857.1| amino acid-binding domain sensor hybrid histidine kinase
           [Magnetococcus sp. MC-1]
          Length = 843

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 89/279 (31%), Gaps = 30/279 (10%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            ++CL++L + +      +   I        G+         +   G+ +G   D    +
Sbjct: 14  LLVCLVVLAWPAQLLANRVPDPI------IVGVYQNK-PMIFLDEKGEVQGLYKDILGII 66

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +        +++Y           LQ  +ID+L          E +L + F   ++F   
Sbjct: 67  AERHGW---QLEYRYGKWSALLEQLQRGEIDLLGA---IAYSDERALSMDFGKQSFFVNW 120

Query: 128 G-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           G     +++ ++S   L G  + V  G      LA+  K   +    + ++    +    
Sbjct: 121 GQVYTREERKVASFLDLQGKRVGVLKGDIYGHRLAELVKKFGVSIEIVGYDSYSYVLHGI 180

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           +    DA   +     A +          +    I  +P+   +     +          
Sbjct: 181 KQGEVDAGVVNRLTGGAEQQR------FGLYGTPILFNPVEVTVAVPKGKNM-------- 226

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           A+++A E  +     +       +    R+LGI     +
Sbjct: 227 ALLSAIEHDLVVMKAD--KDSAFHKAFDRWLGIASKPEM 263


>gi|313201663|ref|YP_004040321.1| methyl-accepting chemotaxis sensory transducer [Methylovorus sp.
           MP688]
 gi|312440979|gb|ADQ85085.1| methyl-accepting chemotaxis sensory transducer [Methylovorus sp.
           MP688]
          Length = 589

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 71/245 (28%), Gaps = 26/245 (10%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L DI +RG L+  I     G +     G+  +G DV++  A +  +     +I+++  
Sbjct: 301 DRLNDILQRGVLRVAIEPSFKGLSFRLRPGEALRGLDVEYATAFARYLG---VQIEFIEH 357

Query: 84  NAKERFLALQSKQ------IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-G 136
              +    L   +       D++      +        +A+     +             
Sbjct: 358 PWDQCVDLLHIGRSRGEPEADLVWSALPPSAS---YYKVAYSDAYTYLHYMLARRAGDER 414

Query: 137 ISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYH---------PIVFERVEEIDAAY 186
           IS +  L G  +          TL A   +    K            I +     I  A 
Sbjct: 415 ISGLGSLQGKVLGCINDPGAFATLEAAGLRWSKHKREERGTIRLANLIAYTDQSIIHDAL 474

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVI--LPDIISKSPLAPAIIQGDTEWYNIVSWT 244
              + DA+  D           D P    I  L   I+ SP    +   D      +   
Sbjct: 475 ADGKIDAFAVDQPIFAWACNGKDSPWHGRIELLNGNIAPSPWYYTVAVADDPASYTLLQY 534

Query: 245 HYAMV 249
             A +
Sbjct: 535 VNAFI 539


>gi|262158743|ref|ZP_06029856.1| GGDEF family protein [Vibrio cholerae INDRE 91/1]
 gi|262029316|gb|EEY47967.1| GGDEF family protein [Vibrio cholerae INDRE 91/1]
          Length = 461

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 8   KLFLLLMIAWPLLFGSMSEA--------VERQTLTIANSKAWKPYSYLDEQGQPSGILID 59

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   I++  ++  +   A++  + D+ +              L F    
Sbjct: 60  FWLAFGEANHVD---IEFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPL 113

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   +I V  G        ++ +    +   I +   E +
Sbjct: 114 LTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 173

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 174 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 232

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 233 Q-GFAQLSSNEKN 244


>gi|238894934|ref|YP_002919668.1| amino acid ABC transport system substrate-binding component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238547250|dbj|BAH63601.1| amino acid ABC transport system substrate-binding component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 297

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 78/250 (31%), Gaps = 19/250 (7%)

Query: 34  GFLKCGINT-GLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           G L   I+       A + ++     G D D  R L+ ++     K++ +P   ++  L 
Sbjct: 52  GTLTVAISALNSPPLALLASDNRTRIGSDPDIARLLAGSLG---LKLRLVPTAWEDWPLG 108

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASI 148
           + S + D+   N   T  R+      F      D   F +     I   +  + L+G  +
Sbjct: 109 IASGRYDVALINIAVTEKRKE--KFDFA-TYRVDSLAFSVKSTSDIAAVNGPADLAGRKV 165

Query: 149 CVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            V +GT  E  L     D   A   +  P+        +   ++ R D + G  S     
Sbjct: 166 IVGSGTNQERILLGWNEDNRAAGRPQAQPVYLTDDASGNLYIQSGRADIFFGPQSVAAYK 225

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
              N +     + P        A    +G+   + +        +   E         + 
Sbjct: 226 AALNGQTRVVGLGPKKAWV---ATTTKKGNGLVFAL-QAALDGAIARGEYQQVLARWGEQ 281

Query: 265 SKDTTNPDVQ 274
            +      V 
Sbjct: 282 GEAVAQSVVN 291


>gi|121591234|ref|ZP_01678534.1| ggdef family protein [Vibrio cholerae 2740-80]
 gi|121546908|gb|EAX57060.1| ggdef family protein [Vibrio cholerae 2740-80]
          Length = 438

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 8   KLFLLLMIAWPLLFGSMSEA--------VERQTLTIANSKAWKPYSYLDEQGQPSGILID 59

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   I++  ++  +   A++  + D+ +              L F    
Sbjct: 60  FWLAFGEANHVD---IEFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPL 113

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   +I V  G        ++ +    +   I +   E +
Sbjct: 114 LTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 173

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 174 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 232

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 233 Q-GFAQLSSNEKN 244


>gi|255746666|ref|ZP_05420613.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio cholera CIRS 101]
 gi|262166966|ref|ZP_06034685.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio cholerae RC27]
 gi|255736420|gb|EET91818.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio cholera CIRS 101]
 gi|262024607|gb|EEY43289.1| extracellular solute-binding protein family 3/GGDEF domain protein
           [Vibrio cholerae RC27]
          Length = 461

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 8   KLFLLLMIAWPLLFGSMSEA--------VERQTLTIANSKAWKPYSYLDEQGQPSGILID 59

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   I++  ++  +   A++  + D+ +              L F    
Sbjct: 60  FWLAFGEANHVD---IEFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPL 113

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   +I V  G        ++ +    +   I +   E +
Sbjct: 114 LTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 173

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 174 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 232

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 233 Q-GFAQLSSNEKN 244


>gi|15601316|ref|NP_232947.1| GGDEF family protein [Vibrio cholerae O1 biovar eltor str. N16961]
 gi|147671644|ref|YP_001215330.1| GGDEF family protein [Vibrio cholerae O395]
 gi|153819246|ref|ZP_01971913.1| GGDEF family protein [Vibrio cholerae NCTC 8457]
 gi|153822850|ref|ZP_01975517.1| GGDEF family protein [Vibrio cholerae B33]
 gi|227812125|ref|YP_002812135.1| GGDEF family protein [Vibrio cholerae M66-2]
 gi|229506273|ref|ZP_04395782.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae BX 330286]
 gi|229509607|ref|ZP_04399089.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae B33]
 gi|229516570|ref|ZP_04406017.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae RC9]
 gi|229605823|ref|YP_002876527.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae MJ-1236]
 gi|298499353|ref|ZP_07009159.1| GGDEF family protein [Vibrio cholerae MAK 757]
 gi|9657965|gb|AAF96459.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|126510195|gb|EAZ72789.1| GGDEF family protein [Vibrio cholerae NCTC 8457]
 gi|126519627|gb|EAZ76850.1| GGDEF family protein [Vibrio cholerae B33]
 gi|146314027|gb|ABQ18567.1| GGDEF family protein [Vibrio cholerae O395]
 gi|227011267|gb|ACP07478.1| GGDEF family protein [Vibrio cholerae M66-2]
 gi|227015393|gb|ACP11602.1| GGDEF family protein [Vibrio cholerae O395]
 gi|229346451|gb|EEO11422.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae RC9]
 gi|229353557|gb|EEO18495.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae B33]
 gi|229356624|gb|EEO21542.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae BX 330286]
 gi|229372309|gb|ACQ62731.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae MJ-1236]
 gi|297541334|gb|EFH77385.1| GGDEF family protein [Vibrio cholerae MAK 757]
          Length = 469

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 16  KLFLLLMIAWPLLFGSMSEA--------VERQTLTIANSKAWKPYSYLDEQGQPSGILID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   I++  ++  +   A++  + D+ +              L F    
Sbjct: 68  FWLAFGEANHVD---IEFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPL 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   +I V  G        ++ +    +   I +   E +
Sbjct: 122 LTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 182 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 240

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 241 Q-GFAQLSSNEKN 252


>gi|239834955|ref|ZP_04683283.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823018|gb|EEQ94587.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG
           3301]
          Length = 291

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 55/179 (30%), Gaps = 12/179 (6%)

Query: 33  RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92
           R  +K            V  +G  KG+ +D  +A+S  I       ++   +       L
Sbjct: 45  RKGVKIAAFNDWPPDEFV-EDGVLKGWSIDMAKAMSERIG---VPFEFTATSFDAIIPGL 100

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQ 151
            SK+ D    +   T  R     L F P         F+  K   I S   L G S+ V 
Sbjct: 101 ASKRFDAGFSSFGVTPER--LDSLDFIPQRKEGTAYAFLKGKDFSIKSEKDLCGQSVAVM 158

Query: 152 AGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
            G      L +        A     +   F      + A  + R +      + ++ + 
Sbjct: 159 TGAWDYQYLKEKSAELCESAGEKPINLQQFTTQNAAELAVSSGRVEMVAAGSAKMHYMA 217


>gi|218779492|ref|YP_002430810.1| PAS/PAC sensor hybrid histidine kinase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760876|gb|ACL03342.1| PAS/PAC sensor hybrid histidine kinase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1104

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 76/252 (30%), Gaps = 18/252 (7%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILG-DIKKR-------GFLKCGINTGLVGFAEVKANG 54
           K F++ ++    +     +  ++ L    ++R         L    NT       +  NG
Sbjct: 28  KGFWLCLILTAAVCLHLPAGASAALNLTAEERSWLNSNPDKLVLWFNTEFPPIEFISENG 87

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ G   D    +   +      ++++   +++    L + +    +         E  L
Sbjct: 88  EFTGMGADVIALVEQELG-----VEFIKQPSEDWNEHLAALKSGACAVAPTIVATEERKL 142

Query: 115 GLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
              F           I  ++ +    +S L G  + V +G  +E  L    K  N+    
Sbjct: 143 YAEFTTPYESAPVVIITGNQIQESLELSNLEGMRVAVVSGYASEEYLR---KQPNLDIEM 199

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           I    V     A    + DAY  +  A+    +  +  +   +          +  I   
Sbjct: 200 IPMPDVVHALRATSFGQVDAYL-ENIAVAGYYIEKEGIANLHVAGATDYSFAWSIGISGK 258

Query: 234 DTEWYNIVSWTH 245
                + V    
Sbjct: 259 YPLLASAVKKAM 270


>gi|121728900|ref|ZP_01681908.1| GGDEF family protein [Vibrio cholerae V52]
 gi|121628828|gb|EAX61289.1| GGDEF family protein [Vibrio cholerae V52]
          Length = 469

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 16  KLFLLLMIAWPLLFGSMSEA--------VERQTLTIANSKAWKPYSYLDEQGQPSGILID 67

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   I++  ++  +   A++  + D+ +              L F    
Sbjct: 68  FWLAFGEANHVD---IEFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPL 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   +I V  G        ++ +    +   I +   E +
Sbjct: 122 LTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 182 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 240

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 241 Q-GFAQLSSNEKN 252


>gi|152995913|ref|YP_001340748.1| diguanylate cyclase [Marinomonas sp. MWYL1]
 gi|150836837|gb|ABR70813.1| diguanylate cyclase [Marinomonas sp. MWYL1]
          Length = 714

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           IK    +  G+      F+     G+  GF+ D    +S        K           F
Sbjct: 33  IKDNPVVSIGMMPDFTPFSYYIE-GELVGFEHDLLTLISQKTGLKFEKHIDKWTTIYNSF 91

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
              ++K+ID++  +  +   RE        P        F+       + +  L+G  + 
Sbjct: 92  ---KNKEIDMI-SSISYKKYREPFTIFT-SPYYNIPIMIFVKDDFGEYNGLKSLTGKKVG 146

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V         L +         + I ++  +++       + DA   ++ 
Sbjct: 147 VLKDVFYIKELEEL-----GSMNLIFYDSYDDLTKDLVFGKIDALMQNLP 191



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 61/223 (27%), Gaps = 11/223 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
                      +K  IN   + F  +  +G+  G   D+ R     +      +      
Sbjct: 271 DTEKAYINTHTIKYCINPSGLPFEGLNEDGEHVGMSSDYYRLFEQMLSAKFELV--KTNT 328

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQL 143
             +    +Q K+ D+L+         E    L F                   I+ +  L
Sbjct: 329 WSQSVEYIQHKKCDMLALGM---ETEERKKYLNFTSHYLDVPLVVATRVDVPFINQILDL 385

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            G  I +  G      L    +        +  + + +     +  +  AY   + A   
Sbjct: 386 EGEKIGIIRGDVFVKIL----RTKYPSLKIVEVDDIYDGLDQVKNGQLFAYIDTL-ASIG 440

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            +  +    E  I   I     L+ A+ + D     I+     
Sbjct: 441 YEFQSKYFGELKIAGKISENLKLSIAVRKDDETLLGILQKVVN 483


>gi|317152245|ref|YP_004120293.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942496|gb|ADU61547.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 254

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 68/237 (28%), Gaps = 21/237 (8%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L+      L  +  +   G+  G DV+F   L++ +      ++Y+    K      +
Sbjct: 25  GVLRV-SFNDLPPWKVLGPKGEPTGIDVEFLNMLAARMG---LTVEYVHYPFKRGLKLTE 80

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQ 151
           S  +D +         RE  L        +   + F + K  +  I+    L G  +   
Sbjct: 81  SGDVDAMIGVLRR-PEREAYLHYIEPAYKHETSKAFFVLKGRENTIARHEDLYGLRVGTV 139

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
            G        D  +              +       A R DA     +A           
Sbjct: 140 LGGRYYPGFDDDTRIFKH-----PVTSYDLNFRMLLAGRIDAVVMTETAGVYRVAQLG-- 192

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
                L + + K+            +  +   + +A    E   +  + + + + D 
Sbjct: 193 -----LGNTVVKATYVH--RDHQDVYMVLSKRSVHADRLEEFSRVMDELVREGALDA 242


>gi|256005420|ref|ZP_05430384.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Clostridium thermocellum DSM 2360]
 gi|281417124|ref|ZP_06248144.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Clostridium thermocellum JW20]
 gi|255990646|gb|EEU00764.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Clostridium thermocellum DSM 2360]
 gi|281408526|gb|EFB38784.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Clostridium thermocellum JW20]
 gi|316940835|gb|ADU74869.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Clostridium thermocellum DSM 1313]
          Length = 862

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 71/248 (28%), Gaps = 17/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F   LC+  L         +    I     L          F  +  +G+  GF+
Sbjct: 1   MKVKCFGINLCVFSLLLIFCQVVYAKTDTIIYETELY------GPPFKFI-EDGEISGFE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + + S       +  Y     ++ +  L++ +ID           R+    + F  
Sbjct: 54  IELNQYIFS---GSEYRFDYRFNTWEKVYEKLKNGEIDT-CGLLVVNEERKK--DILFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                       +K     +  L    + V     +E  L D     N       F  VE
Sbjct: 108 TVMNIYISIYSKEKNKNIGIKDLEKYRVGVGKEQYSEHILKDSVGISNYT----TFVDVE 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A    + D    +   +    +      + +     +    +A  + + + E    
Sbjct: 164 EAIDALNEGKIDVIFENQDVVNHYLIKKGLTGKIIPHKTELFPVKVAYGVSKRNPELVKY 223

Query: 241 VSWTHYAM 248
           ++    ++
Sbjct: 224 INERLDSV 231


>gi|89069636|ref|ZP_01156975.1| putative amino acid-binding periplasmic (signal peptide) abc
           transporter protein [Oceanicola granulosus HTCC2516]
 gi|89044834|gb|EAR50934.1| putative amino acid-binding periplasmic (signal peptide) abc
           transporter protein [Oceanicola granulosus HTCC2516]
          Length = 267

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 13/207 (6%)

Query: 35  FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            +             V+ + G+  G++ D    ++  +     ++ Y   +      A+ 
Sbjct: 35  EVVVATENAYPPLQFVEPSSGEAVGWEYDAMAEIAERL---NIEVVYETTSWDAMIPAVS 91

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASIC 149
             Q D+    T  T+  + +  + F           ++     +    +S +      + 
Sbjct: 92  EGQYDMGM--TGITIREDRAEVVDFSAPYMTSQMVMLVRGDEERFADAASFAADDDLLVA 149

Query: 150 VQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            Q GTT   + + D            +FE       A RA   D    D +A       +
Sbjct: 150 AQPGTTPFYVAVYDLLDGDEANPRVALFETFGAGVQALRAGDVDMVLTDGTAGEGYVAAS 209

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDT 235
           +      I+ + +          +G  
Sbjct: 210 E--GALKIVGEPLGTEQFGFIFPKGSD 234


>gi|125972929|ref|YP_001036839.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Clostridium thermocellum ATCC 27405]
 gi|125713154|gb|ABN51646.1| periplasmic sensor diguanylate cyclase/phosphodiesterase
           [Clostridium thermocellum ATCC 27405]
          Length = 862

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 71/248 (28%), Gaps = 17/248 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F   LC+  L         +    I     L          F  +  +G+  GF+
Sbjct: 1   MKVKCFGINLCVFSLLLIFCQVVYAKTDTIIYETELY------GPPFKFI-EDGEISGFE 53

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           ++  + + S       +  Y     ++ +  L++ +ID           R+    + F  
Sbjct: 54  IELNQYIFS---GSEYRFDYRFNTWEKVYEKLKNGEIDT-CGLLVVNEERKK--DILFSD 107

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
                       +K     +  L    + V     +E  L D     N       F  VE
Sbjct: 108 TVMNIYISIYSKEKNKNIGIKDLEKYRVGVGKEQYSEHILKDSVGISNYT----TFVDVE 163

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   A    + D    +   +    +      + +     +    +A  + + + E    
Sbjct: 164 EAIDALNEGKIDVIFENQDVVNHYLIKKGLTGKIIPHKTELFPVKVAYGVSKRNPELVKY 223

Query: 241 VSWTHYAM 248
           ++    ++
Sbjct: 224 INERLDSV 231


>gi|120406055|ref|YP_955884.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119958873|gb|ABM15878.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 286

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 69/251 (27%), Gaps = 29/251 (11%)

Query: 5   FFVSILCLIILFFTSFST----NASILG------DIKKR---GFLKCGINTG-LVGFAEV 50
           +  +   L++L   + +      A  L       D+      G L  G +      +   
Sbjct: 9   WRTAAAVLVVLAGPACAAPVGVTAPTLDSSKCSRDVLATQYPGILTFGADQPVYPPWYMG 68

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTL 108
               +  GF+     AL++ +      ++++ +       AL       D+       T 
Sbjct: 69  DDPTNGDGFESALAYALAAKLNYTGDDVRWVRVPFN---TALAPGAKTFDVNLSQFSITE 125

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG---ASICVQAGTTTELTLADYFK 165
            R     + F    +   Q  +  +    ++V+ L G     +  Q GTT+     +   
Sbjct: 126 QRRA--AVDFSTPYFDVTQAVVAVRTSPAAAVTTLDGLRPLRLGAQVGTTSHTAATE--- 180

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKS 224
                     +    +   A      DA   D+     +            LP D     
Sbjct: 181 -LGGSVPVQAYNTNVDAKMALLDGEIDAMVVDLPTALTMAEELRHGVLVGQLPADGEHLE 239

Query: 225 PLAPAIIQGDT 235
                +  G  
Sbjct: 240 QFGIVLSHGSP 250


>gi|87121270|ref|ZP_01077160.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Marinomonas sp. MED121]
 gi|86163427|gb|EAQ64702.1| periplasmic substrate-binding protein/sensor histidine kinase
           [Marinomonas sp. MED121]
          Length = 572

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 68/204 (33%), Gaps = 22/204 (10%)

Query: 6   FVSILCLIILFFTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
             + L   +L  +       ++ +I      ++     G +     +  V   G+  G+ 
Sbjct: 16  ITTFLTCALLLMS-----QQLMAEIDNKSGMQKPVFVVGADHSYPPYEFVNQYGEPDGYT 70

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+   A++  +  +   +++   + K     L  + +D+L            +  ++F P
Sbjct: 71  VELTLAIAELMGFE---VEFRMSDWKTALKGLYQEDVDVLQG---IAYSVVRAQTISFSP 124

Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                 Q          IS+VS L    + VQ  +     L +     ++    I     
Sbjct: 125 PHSIVNQSIFARDDSPNISNVSMLKDKEVIVQNASIMHEYLINE----DIGAKIIPAPTH 180

Query: 180 EEIDAAYRAHRCD-AYTGDISALY 202
            E      A + D A   ++ +LY
Sbjct: 181 LEALRLLAAGKHDFALIANLPSLY 204


>gi|114563356|ref|YP_750869.1| diguanylate cyclase [Shewanella frigidimarina NCIMB 400]
 gi|114334649|gb|ABI72031.1| diguanylate cyclase [Shewanella frigidimarina NCIMB 400]
          Length = 941

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 11/253 (4%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G +K G             NG++ G + D    L   +      + Y   +       L 
Sbjct: 504 GAIKMGYLKNWAPMEFQGKNGEFLGVNADIKNLLVKQLNLTIIPVAYD--DFGNMMNDLI 561

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQA 152
             +I ++  +   T+ RE    LAF    +      +    +  I ++SQ++G  + V  
Sbjct: 562 KGEIHLV-ASMAKTVERE--NKLAFSLAYWPSPWAIVTSLSQPPIFNISQVTGKRLAVVD 618

Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           G      + D  +        +     ++   A      D +   ++ L         PS
Sbjct: 619 G----YHIVDQLRQQYPGIKLVPVADTKQGMEAVITGSADMFVEQVATLATTLKGGQYPS 674

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272
             + L   +++      +  G      ++      +   E+  + QK +  +  ++    
Sbjct: 675 LKMSLLAELTEQHSHIGLFPGVKNLVPLIDRVIATIDETEQQNMYQKWV-SLDLNSDTLR 733

Query: 273 VQRFLGIDKSSNI 285
            QR+L I     +
Sbjct: 734 YQRWLKILVIGLL 746



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 85/245 (34%), Gaps = 12/245 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    ++  +    +   + + ++           L   +      F  +   G   G  
Sbjct: 1   MKFIPWILAMLFAWISLPAQAIHSDKTELSVDHLPLVIVMGEDTYPFEYLDEKGTPAGIL 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119
           VD  R    +I  D +K+Q++  + ++    L+ K+ DI          R       F  
Sbjct: 61  VDLWRE--WSIITD-TKVQFVSRHWQQSLDQLEQKKADIHI-GMSQNQAR--LKKFDFAK 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P T  +   +I         +S L    + + +G++ E TL     A   K     ++  
Sbjct: 115 PFTSLNTYLYIHKSLSSKKQISDLVPYQVGIVSGSSHEATLL----ALEPKLSFKRYQNR 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWY 238
           E++  A        + G       L L  D  +        +I K  LAPA+++GD +  
Sbjct: 171 EQLLQAAVKGELFVFAGIEGYQRNLALEQDIAANFYSSSRILIKKINLAPAVVKGDLDLL 230

Query: 239 NIVSW 243
           N ++ 
Sbjct: 231 NKINQ 235


>gi|167588267|ref|ZP_02380655.1| extracellular solute-binding protein, family 3 [Burkholderia
           ubonensis Bu]
          Length = 258

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 65/210 (30%), Gaps = 12/210 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVD 62
            F      L   F T F+   +  G        K G     V F  +   +   +G  VD
Sbjct: 3   SFIKQFGTLAAGFATCFALATAPSGAAAAEPTYKVGATATGVPFTFLDVKSNSIQGMMVD 62

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
              A+++A      ++            +L +++IDI+S     T  R     + F    
Sbjct: 63  ---AITAAGKAAGFRVDVQQTVFSALIPSLTTQKIDIISAAMLKTPAR--QQVVDFSDTV 117

Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y  G+G I+        +S+    G  +  Q GT     L        +      ++ + 
Sbjct: 118 YTFGEGLIVRADDPGRYTSMDDFKGQVVGAQVGTAFVDALN----KKGIFKEVRTYDSIA 173

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           +I       R  A   D   L      N  
Sbjct: 174 DIMRDVGLGRIKAGFADQPILAYQIEHNAN 203


>gi|224825488|ref|ZP_03698593.1| methyl-accepting chemotaxis sensory transducer [Lutiella
           nitroferrum 2002]
 gi|224602409|gb|EEG08587.1| methyl-accepting chemotaxis sensory transducer [Lutiella
           nitroferrum 2002]
          Length = 562

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 71/250 (28%), Gaps = 24/250 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
             L D+ +RG L+  I    VG +          G DVD+  A +  +     +++++  
Sbjct: 304 DRLEDVMRRGLLRVAIEPAFVGLSFRLHPADRLLGLDVDYASAFARWLG---VRVEFVEH 360

Query: 84  NAKERFLALQSKQIDILSRNT---DWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139
              +    L   +    +         L      G+A                    I+ 
Sbjct: 361 AWDQCPDLLYFGRTPSEAPADLMWSALLSHAALSGVACSRPYTSMPFILARRAGDGRING 420

Query: 140 VSQLSGASICVQAGTTTELTL----------ADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ L+G  + V         L           D   +     + I +     I  A    
Sbjct: 421 LADLAGKVLGVGNDPAAITVLEGAGVRWQANRDKPGSVVQLANLIAYSDQGRIHEAVATG 480

Query: 190 RCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSW 243
             DA+  +       A    +    +  ILP  ++  P       A    +      V+ 
Sbjct: 481 VVDAFAVERPIFHWAATDRASRWRGKIEILPGNLAGEPWHYCVGVAAAPENQRLLAKVNE 540

Query: 244 THYAMVTAEE 253
             +  + A E
Sbjct: 541 FLHDFLVAPE 550


>gi|209884636|ref|YP_002288493.1| extracellular solute-binding protein, family 3 [Oligotropha
           carboxidovorans OM5]
 gi|209872832|gb|ACI92628.1| extracellular solute-binding protein, family 3 [Oligotropha
           carboxidovorans OM5]
          Length = 364

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 50/144 (34%), Gaps = 17/144 (11%)

Query: 5   FFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            +++++   I   ++  + +         +        L  G       FA    NG+W 
Sbjct: 2   LWLALMPAAISLLSATPSFSQTRAANPAPVDR-----ELVIGTKVA-PPFAMKDENGNWS 55

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G  ++  + L+S +  +   ++   + A      +++ Q D+       T  RE    L 
Sbjct: 56  GVSIELWQHLASRLKWNYHFVEADTVPA--LLDGVKTGQFDVAISAISITAERE--QALD 111

Query: 118 FRPITYFDGQGFIMHKKKGISSVS 141
           F    +  G G  +   +  + + 
Sbjct: 112 FTTSYFHAGTGVAVQADRITNWIP 135


>gi|270160242|ref|ZP_06188898.1| bacterial extracellular solute-binding family protein [Legionella
           longbeachae D-4968]
 gi|289164994|ref|YP_003455132.1| arginine-binding periplasmic protein [Legionella longbeachae
           NSW150]
 gi|269988581|gb|EEZ94836.1| bacterial extracellular solute-binding family protein [Legionella
           longbeachae D-4968]
 gi|288858167|emb|CBJ12033.1| putative arginine-binding periplasmic protein [Legionella
           longbeachae NSW150]
          Length = 241

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 63/218 (28%), Gaps = 23/218 (10%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
           F+S L   IL  +S                +K G       F         +GFD++   
Sbjct: 3   FISYLLFFILGISSVHA------------EIKIGTVHYFPPFII----NKNQGFDIELMN 46

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
            L   I     K  ++ +   E F AL++++++++                 F       
Sbjct: 47  YLCQKI---KIKCSFVQMKDSELFKALENRKVNLVMAGIMI--PPHSQGNYIFSLPYLPV 101

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
              FI+  +  +   + L+G  +        E+ +         +     ++  + +   
Sbjct: 102 RAVFIVPAQSNLKQETDLNGKIVGAANDLNGEVFVDYLQTNFQNQLQIKKYDSPDTLIND 161

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
                  A        YA    N+  +   +L      
Sbjct: 162 LENGTLSAAFVRE--FYANYWQNNGLTNIRVLGQPREV 197


>gi|34557246|ref|NP_907061.1| sensory transduction histidine kinase [Wolinella succinogenes DSM
           1740]
 gi|34482962|emb|CAE09961.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Wolinella succinogenes]
          Length = 1555

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 46/170 (27%), Gaps = 11/170 (6%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I  R  L+    +           G   GF +D+ + L+S +      +     +     
Sbjct: 326 ILMRPTLRVQNESDFAPMNYHSDGGQPAGFSIDYIKLLASKVGLKVEYV-----SGPTWS 380

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGAS 147
             LQ  +   L    +     E    L F                + +  SS++ L G  
Sbjct: 381 EFLQMMRDGRLDAMVNIAKSPEREEYLLFTSPYSEIISAVFTKDSRAQEFSSLNDLKGKK 440

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           + V  G   E  L  ++         +  E            + DA    
Sbjct: 441 LAVVKGFFEEALLKKHYPE----IEMVFAEDTLSALKMVAFGKADAAINS 486



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 11/220 (5%)

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
              ++   + F ++ + G+++G   D  + +      +   +Q    +  E   A++S Q
Sbjct: 582 TLCVDPLWMPFEKLDSKGNYEGIAADLLKIVFERTGVEAKVLQTK--DWVETLNAVKSGQ 639

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTT 155
            DIL   ++ T  RE    L F    + D   FI H     I++   L G +I +  GT+
Sbjct: 640 CDIL-SFSNQTPAREEW--LLFSDPLFQDPNVFITHADHPFITNPKSLEGKTIVLPKGTS 696

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E  +   +         I+ E  EE+  A    + D     ++            S  +
Sbjct: 697 IEEWVRRDYP----WLKLILVETEEEVFKALLERKADLSIRSLTVAAYTIKKEGLFSLKI 752

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
                   +     I   +    +I++   +  +T EE+ 
Sbjct: 753 AGQLPEKDNHFRMGIKPKEPILRDILNQGIH-TLTPEEID 791


>gi|317051227|ref|YP_004112343.1| PAS sensor protein [Desulfurispirillum indicum S5]
 gi|316946311|gb|ADU65787.1| PAS sensor protein [Desulfurispirillum indicum S5]
          Length = 1000

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 88/271 (32%), Gaps = 23/271 (8%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKANGDW 56
           K     ++  ++L     +   +++    +R      G +    +   V F  V   G++
Sbjct: 42  KWICRLLIGCLLLPMLCGAWAGAVMLTAAERMYLEALGPITVAPDPDWVPFEHVDERGNF 101

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G   D    ++S +      I++  +  ++   AL+  +   +               L
Sbjct: 102 TGIAADLLDLVASRLG-----IEFSYVFPRDWDEALELSRSGQVLILPFLNQTPARQEWL 156

Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            F      D   FI   +   I   +QL+G  + + +GT+ E  +   F         + 
Sbjct: 157 LFTEPLLVDPNVFITREEHPYIVDATQLTGKVMVLPSGTSMEERVRRDFP----NLEIMH 212

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQ 232
                ++ +A    R DA     S   +          ++ +         + L   +++
Sbjct: 213 VATENDVFSAVS--RRDADLTLRSLTISAYTIRKEGLFNLKIAGQAPEHYTNRLRMGVLK 270

Query: 233 GDTEWYNIVSWTHYAMVTA--EELGITQKNI 261
            +    +I+      +  A  EE+     NI
Sbjct: 271 SEPMLRDILDRAIATITHADREEIVNRHVNI 301


>gi|70728487|ref|YP_258236.1| sensory box histidine kinase/response regulator [Pseudomonas
           fluorescens Pf-5]
 gi|68342786|gb|AAY90392.1| sensory box histidine kinase/response regulator [Pseudomonas
           fluorescens Pf-5]
          Length = 1200

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 69/229 (30%), Gaps = 15/229 (6%)

Query: 30  IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           I +   +    +            G W G ++D    +S         +Q       +  
Sbjct: 306 ILQHQHVVVA-SQQYPPHVFKDKEGQWTGLNIDLLNRISRMTGLH--FVQKESQTTAQTL 362

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI 148
             L+S +  +   NT  T   +  L L F          F++  +   +SS+ Q++G  +
Sbjct: 363 ELLESGEAQM---NTTLTASDDRRLFLNFSHAFGGAAWVFVVRPEDRRLSSLKQMAGEVL 419

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
            + A  T E  +      +            EE  A        A     S + AL    
Sbjct: 420 VLPARHTLESFIRR----NYPDIRLRSVASYEEARALVSNGE--AMATIQSEVQALGPAE 473

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
                   +    S      ++ +   E  +I++    A+  AE   + 
Sbjct: 474 TGVMVGRSVEGTWSADE--FSVRKDQPELLSILNKALEALPVAELSALR 520


>gi|149913719|ref|ZP_01902251.1| ABC polar amino acid family transporter, periplasmic ligand binding
           protein [Roseobacter sp. AzwK-3b]
 gi|149812003|gb|EDM71834.1| ABC polar amino acid family transporter, periplasmic ligand binding
           protein [Roseobacter sp. AzwK-3b]
          Length = 547

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 12/196 (6%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G+      FAE+   G   GF+ D  R +++ +      ++ +P+    R   L   
Sbjct: 66  LRVGLRGDYPRFAEIGPIG-HSGFEADIAREIAARL---NVALKVVPVTPVNRISKLGEG 121

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++D++         R+ ++    RP  +      +    +   +   L    +C   G  
Sbjct: 122 EVDLVIATMGHNTQRDPTVHFL-RPHYFQSETILLGAADQNPLTWKDLETRLVCTTVGNY 180

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           + + LA            ++F R +++  A     C     D + L  L  +   PS   
Sbjct: 181 SNVILAPDVG------RLMLFSRSQQLIDALLNEMCPLIAQDDTLLLPLISSETEPSRFE 234

Query: 216 ILPDIISKSPLAPAII 231
                    P   A+ 
Sbjct: 235 RKLGFAPV-PWGMAMP 249


>gi|107026378|ref|YP_623889.1| extracellular solute-binding protein [Burkholderia cenocepacia AU
           1054]
 gi|116692433|ref|YP_837966.1| extracellular solute-binding protein [Burkholderia cenocepacia
           HI2424]
 gi|170738365|ref|YP_001779625.1| extracellular solute-binding protein [Burkholderia cenocepacia
           MC0-3]
 gi|105895752|gb|ABF78916.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650433|gb|ABK11073.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169820553|gb|ACA95135.1| extracellular solute-binding protein family 3 [Burkholderia
           cenocepacia MC0-3]
          Length = 258

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63
           F      L   F T  + + +    +     LK G     V F  +   +   +G  VD 
Sbjct: 4   FIKRFGALAAGFVTCIALSTASASAVAAEPTLKVGATATGVPFTFLDVKSNSIQGMMVD- 62

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A+++A      ++            +L +++IDI+S     T  R     + F    Y
Sbjct: 63  --AITAAGKSAGFRVDVQQTVFSALIPSLTTQKIDIISAAMLKTPAR--QQVVDFSDTVY 118

Query: 124 FDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
             G+G I+        +S+       +  Q GT     L        +      ++ + +
Sbjct: 119 SFGEGLIVKADDPGRYTSMDDFKDQVVGAQVGTAFVDALN----KKGIFKEVRTYDSIAD 174

Query: 182 IDAAYRAHRCDAYTGDISALYALK 205
           I       R  A   D   +    
Sbjct: 175 IMRDVALGRIKAGFADQPIVAYQI 198


>gi|229523051|ref|ZP_04412463.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae TM 11079-80]
 gi|229339901|gb|EEO04911.1| ABC-type amino acid transport/signal transduction component [Vibrio
           cholerae TM 11079-80]
          Length = 469

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 84/252 (33%), Gaps = 15/252 (5%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F+ ++    L F S S          +R  L    +     ++ +   G   G  +DF
Sbjct: 16  KLFLFLMIAWPLLFGSMSEA-------VERQTLTIANSKAWKPYSYLDEQGQPSGILIDF 68

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
             A   A   D   IQ+  ++  +   A++  + D+ +              L F     
Sbjct: 69  WLAFGEANHVD---IQFQLMDWNDSLEAVKLGKSDVQAGLI---RSASRLAYLDFAEPLL 122

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
                  +H+      +  L   ++ V  G        ++ +    +   I +   E + 
Sbjct: 123 TIDTQLYVHRTLLGDKLDTLLSGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELMM 182

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V  
Sbjct: 183 SAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVEQ 241

Query: 244 THYAMVTAEELG 255
             +A +++ E  
Sbjct: 242 -GFAQLSSNEKN 252


>gi|209521002|ref|ZP_03269737.1| multi-sensor hybrid histidine kinase [Burkholderia sp. H160]
 gi|209498574|gb|EDZ98694.1| multi-sensor hybrid histidine kinase [Burkholderia sp. H160]
          Length = 1498

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 92/326 (28%), Gaps = 44/326 (13%)

Query: 1   MYKDFFVSILCLI-ILFFTSFS---------TNASILGDIKKR----------GFLKCGI 40
           M     + +L     +   +            +AS    ++ R            L  GI
Sbjct: 1   MIHWLALCLLAATHAICLAALGGAESEEPAIASASAPSTVQVRSSAPSPTAFPARLTVGI 60

Query: 41  -NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
              G   F  ++ +G   G   D   AL   +  +         N  +   A  S Q+D+
Sbjct: 61  LEGGWPPFD-IEQDGRPAGVSGDLLHAL---VGPNVVIETKAFPNMAKLIDAACSGQVDL 116

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           L      T  RE  L     P         +       ++ + L+GA I ++ G   E  
Sbjct: 117 LMS-VARTPERERCLRFT-APYFRAFASAVVRRDDTRYANSADLAGARIAIERGFARERL 174

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           L D F         + F    E   A      D Y G    +     T       V    
Sbjct: 175 LRDGFPRA----RIVSFASTHEALTAVLHGNADLYFGFTPVIQYELATQAYRGLRVAFEP 230

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT----QKNINQVSKDTTN----- 270
           +     L  A+        + ++    ++  AE   I       N N       +     
Sbjct: 231 VGKALDLRFAVSPRRVALRDQLNRALASLNPAEAAEIRARWLSGNFNAAPAPDASGFTLT 290

Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWT 296
           P+ Q +L           +G  KDW 
Sbjct: 291 PEEQSWLRALPPL----QIGFDKDWA 312



 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 73/244 (29%), Gaps = 10/244 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G +     F+ V   G   G   D+   LS  +    ++      +      A Q  
Sbjct: 303 LQIGFDKDWAPFSYVDDAGRPVGLTADYLAYLSRTLGVVLNRA--RMADWPATVEAFQRG 360

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
            + +L+     +    +  G     +   D    +  K  G  S       + C    + 
Sbjct: 361 DLAMLA---TASSHGSLLEGAEHSRVYERDPLVIVGRK--GAPSPCSFDDFTSCRVVMSP 415

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
                           H +V   +++      +   D   G+ +A+ A            
Sbjct: 416 HVAGSVPLAFEAVPVDHIVVAASLDDALRKVASGEADVAVGNAAAINAQLPQ-QYAGALR 474

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ- 274
           +L  +     L  A+ +  +    ++     AM  AE+  I +K +   + D     V  
Sbjct: 475 VLGTLGESDSLYFAVREDLSPLVKLIDRALQAMPPAEKQRIRRKWVRPAAPDDAIWSVTA 534

Query: 275 -RFL 277
            R L
Sbjct: 535 VRLL 538


>gi|116617493|ref|YP_817864.1| ABC-type amino acid transport system, periplasmic component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096340|gb|ABJ61491.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 275

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 68/227 (29%), Gaps = 13/227 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +K G       FA +  +G   G D+   +A+   +     K +    +       L+S
Sbjct: 43  TIKVGSGNDAQPFAYLDKSGKPVGMDIALIQAIDKKL--PQYKFKLTLSDFPTLITNLKS 100

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +  +     +    R+          T +D           ++S +   G  + V   +
Sbjct: 101 GKTTMAMEQIEQNTERKQDFKFGSVGYTVWDTLLATKKSTGVLNSFADAKGKKLYV-TNS 159

Query: 155 TTELTLADYFKAHNMKYHPIVFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212
           T + TL D +   N   + +V       ++     +++ + Y     ++  L        
Sbjct: 160 TNQATLTDAYLKKNPNAYSVVRGTYTMEQVAQGINSNQFNVYPAPKYSIDLLNRQFKTKL 219

Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            +     +   +       + D +    V+         EEL     
Sbjct: 220 VYGKA--VNHSNAYPMFNKKADPKLVKAVNKAM------EELKKDGT 258


>gi|215275605|sp|Q48LX4|MLTF_PSE14 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
          Length = 496

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 65/240 (27%), Gaps = 9/240 (3%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            I   + L   +     + L  +K+ G L+         +     NG+  GF+ +  +  
Sbjct: 15  LIATGLFLMLGACVEKPTTLERVKEDGVLRMITRNSPATY-FQDRNGE-TGFEYELVKRF 72

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           +  +  +        L+        +     + +     T  R+      F         
Sbjct: 73  ADDLGVELKIETADNLD-DLFDQMNKPGGPVLGAAGLIETPKRK--QQARFSHSYLEVTP 129

Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185
             +    +   +    L G  I V  G+     LA     +  ++Y       V ++   
Sbjct: 130 QVVYRNGQSRPTDPGDLVGKRIVVLKGSAHAEQLAALKAQNPGLEYEESDAVEVVDLLRM 189

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
               + D    D + L   ++          L +   +          D    N ++   
Sbjct: 190 VDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGEA--REQRWVVAPGEDNSLLNEINAYL 247


>gi|307131972|ref|YP_003883988.1| ABC transporter periplasmic binding-protein [Dickeya dadantii 3937]
 gi|306529501|gb|ADM99431.1| ABC transporter, periplasmic binding-protein [Dickeya dadantii
           3937]
          Length = 294

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 66/247 (26%), Gaps = 35/247 (14%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K+   +          +      G   GF+ +    L   +     + + +  N      
Sbjct: 38  KEWKSVTIATEGSYEPWNLTLPGGKLGGFEPELMTILCQRM---NIQCKLVVQNWDGMIA 94

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----------KKGISSV 140
            LQ+ + D++      T  R+    + F          FI  K          K  I   
Sbjct: 95  GLQAGKFDVMMDAIVITPERK--QVVDFSLPYASTPASFITVKGKLALPVEADKAMIKLA 152

Query: 141 SQ--------------LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           +               L G +I + +GT     +  YF+          +    +     
Sbjct: 153 NDPAQIKPAVAGLRGALQGKTIGIASGTVYTPFIDSYFR---DVATVREYTASADAILDL 209

Query: 187 RAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           +A R DA   D++   ++    +  +       L   I     A    + D E       
Sbjct: 210 QAGRIDAVFDDVTFANSILSKPENNNLTLGGPQLTGPIWGEGEALGFRKSDPELKAKFDA 269

Query: 244 THYAMVT 250
                + 
Sbjct: 270 AIKTALA 276


>gi|239815853|ref|YP_002944763.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239802430|gb|ACS19497.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 276

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 76/252 (30%), Gaps = 17/252 (6%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGF-AEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77
               +  +  I+K G L+ G+             NG+ W G      +  +  +    S 
Sbjct: 28  APGASPRIDAIRKAGELRVGVLQNAPWLIENTTGNGEPWSGPAWLLAKEYARLLGVKLST 87

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL-AFRPITYFDGQGFIMHKKKG 136
           +    ++ + +   L S Q+D+       T  R   +    +   +          K   
Sbjct: 88  VP---VSHETKVPVLASNQVDMTISPLGETPERLKVVDFVVYSATSVCMFGRADNAKLAK 144

Query: 137 ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            +SV  L+    +I    G   E  + + F     +   +             A R DA 
Sbjct: 145 AASVDDLNRPEVTIAYFTGGAEEGWVKERFPKA--RLRAVASSGATAPVEEIMARRADAA 202

Query: 195 TGDISALYALKLTNDR----PSEHVILPDIISKSPLAPAIIQGDT---EWYNIVSWTHYA 247
             +      L+         P E+         SP+  A+ +      EW   V+    A
Sbjct: 203 PINRVPWVGLQHKVKGLAVLPKENNCQSSTEKASPVGLAVDKNQPAYLEWLRQVAKARKA 262

Query: 248 MVTAEELGITQK 259
            + A+E  +   
Sbjct: 263 QLDADEARVIGA 274


>gi|317493151|ref|ZP_07951574.1| transglycosylase SLT domain-containing protein [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316918811|gb|EFV40147.1| transglycosylase SLT domain-containing protein [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 498

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 76/253 (30%), Gaps = 21/253 (8%)

Query: 1   MYKD-----FFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M +          +  L+ L         S N S L  I  RG L+              
Sbjct: 1   MKRIKYNYYLIGIVSALLALALWPNIPWRSGNESQLQQILDRGELRVSTINS--PLTYQA 58

Query: 52  ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
              +  G D +  +  +  +         +     E F  L S + D+++    +   R 
Sbjct: 59  DGKNVSGLDYELAKRFADYLGVKLKVR--VRGTLPELFDDLDSGKSDLVAAGLLYNTERL 116

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NM 169
                          Q      K    S++ LSG ++ VQ+G+    TL+ Y +    N+
Sbjct: 117 SRFRTG-PAYYSVSQQLVYRQGKPRPKSLNDLSG-TLAVQSGSAHVTTLSQYKQNKYPNL 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAP 228
            +         E+       + D YT   S   AL        +  +  DI  + P +  
Sbjct: 175 TWESSSDLSSNELMQRVVQGKLD-YTIADSVSVALFQRIH--PQLAVAFDISDEEPVMWY 231

Query: 229 AIIQGDTEWYNIV 241
                D   Y  V
Sbjct: 232 LNRTDDDSLYAAV 244


>gi|296533325|ref|ZP_06895929.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Roseomonas cervicalis ATCC 49957]
 gi|296266341|gb|EFH12362.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Roseomonas cervicalis ATCC 49957]
          Length = 255

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 54/174 (31%), Gaps = 10/174 (5%)

Query: 35  FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
            LK G     V F  +  +     GF VD   A+          +Q           +L 
Sbjct: 29  VLKVGSTPTGVPFTFLDTSTNTITGFMVDLITAIGQD---QGFGVQVQGTPFAALIPSLT 85

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           S +IDI++     T  R   +  +     Y +G      +    ++++ L G S   Q G
Sbjct: 86  SSRIDIIAAAMSATPARREQIDFSEPVYAYGEGAVVKEGETMPGTTMAALKGLSAGAQLG 145

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           TT          A N       ++ V +I       R     GD   L      
Sbjct: 146 TTYAE------AAKNAGLDLRTYDSVADIMRDVSLGRIKVGFGDGPILGYQIAQ 193


>gi|226328050|ref|ZP_03803568.1| hypothetical protein PROPEN_01941 [Proteus penneri ATCC 35198]
 gi|225203754|gb|EEG86108.1| hypothetical protein PROPEN_01941 [Proteus penneri ATCC 35198]
          Length = 486

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 68/241 (28%), Gaps = 16/241 (6%)

Query: 5   FFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           F + I+ L      + +        + +  I  RG L+            +    D  GF
Sbjct: 9   FVIVIIALFSAAIIALNITWPDRQKAQINKILSRGELRISTIPS--PLITMNDKKDPVGF 66

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D +  +  +  +      +  +  N  + F  L++ + D ++    +   R         
Sbjct: 67  DYELVKRFADYLGVK--LVVNMRTNINQMFDDLENNKADFIAAGLLYNQER--LDKTRSG 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFE 177
           P  +   Q  I  K              + V AG+     L    +      ++     +
Sbjct: 123 PAYFSVSQQLIYRKGTLRPRSFDTLDGRLVVTAGSAHASLLRTLKETQYPELEWEESDNQ 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              ++  A    +      D  ++   +  +       +  ++    PL   +   +   
Sbjct: 183 TTSQLLEALSEGKITYVLADSISVAVQQRIHPN---VAVGFEVTESRPLTWYLPDSEDNS 239

Query: 238 Y 238
            
Sbjct: 240 L 240


>gi|284052841|ref|ZP_06383051.1| two-component response regulator [Arthrospira platensis str.
           Paraca]
          Length = 412

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 13/222 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           ++ G+         +  NG   GF VD  + ++     +  ++QY+P    +    L+  
Sbjct: 17  VRVGVYENKPKV-FIDENGKPTGFWVDILKFMARR---ENWQLQYIPCEWNQCLELLEEG 72

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           Q+D++  +   +  R+         +     +         I+S+  L    + V AG+ 
Sbjct: 73  QLDLMV-DVAHSEERDRRFDFNQEVVLVSWSE-IYGRPGISINSIIDLHQKQVAVLAGSI 130

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            +  L +  +A  ++   +     +EI         DA   +    +      +    H+
Sbjct: 131 QQSLLIEKAEAFAVQPQLVEASSFQEIFELVANGEVDAGVVNHLYGWEASSVYNLARTHI 190

Query: 216 ILPD------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           ++               A        +   +    + A   A
Sbjct: 191 LINPSRLHFVTARGENYAILAALDQ-QILEMKRDANSAYYQA 231


>gi|116326909|ref|YP_796629.1| substrate binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116119653|gb|ABJ77696.1| Substrate binding protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 280

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 29/284 (10%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                 L    + F+        L  I  R  L  G+N     F        + G D + 
Sbjct: 5   RILCLFLVFPAVLFSQSEYAGPRLERILSRKELVVGVNKYYEPFYIENPKDGYPGVDAEL 64

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
            +  +  +      +       ++    ++  +ID+        L R     + F     
Sbjct: 65  AKLYADYLGVSLKLVPLK--TFRQFAEDIRIGKIDLAFAGISTDLNR--GKQVTFSDPYL 120

Query: 124 FDGQG----------------FIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKA 166
                                 I  +   +S ++ LSG  S  V++ TT  + L   F  
Sbjct: 121 VTTPAGLVSKKILPPEPEGNIVISRRFMSLSDLANLSGLVSFSVRSNTTNHIYLQKKF-- 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSP 225
              K     +           ++    +  D   +  L   N    + ++ L   + +  
Sbjct: 179 --SKLPIYSYLSDSIAIDNLISNNVTCFVADSFFILTLLQKNPSLKANYLPLLGTVQEEN 236

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTA---EELGITQKNINQVSK 266
           ++ A+   D  + + +++    +      EEL     N N   K
Sbjct: 237 ISAALPLNDLIFADNLNFFIKELKRTGLLEELKNRYFNQNSWVK 280


>gi|322834116|ref|YP_004214143.1| lytic transglycosylase catalytic [Rahnella sp. Y9602]
 gi|321169317|gb|ADW75016.1| Lytic transglycosylase catalytic [Rahnella sp. Y9602]
          Length = 486

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 66/232 (28%), Gaps = 10/232 (4%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               L  IK RG L+            + +     GFD +  +  +  +      +    
Sbjct: 32  EGDQLDQIKSRGELRVSTLNS--PLTFMNSPEGNLGFDYELAKRFADYLGV--QLVVTQH 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
              +  F  L     D+L+    +   R  +      P  Y   Q  +  +         
Sbjct: 88  TTIESMFDDLDHDNTDMLASGLVYNNERLKNYRA--GPEYYSVSQQLVYRQGSVRPKSFA 145

Query: 143 LSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
               S+ V AG+    TL    K + ++ +         ++       + D   GD   +
Sbjct: 146 DIKGSLVVSAGSAHIATLEAASKKYPDLAWTTTDKMSPRDLLQQVENGKLDYTLGDSVTI 205

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
             ++    R     +  D     P+     +   +     +   +    +E+
Sbjct: 206 ALMQRVYPR---LAVAFDATDDEPVTWYYRKQPDDDSLSAAMLDFFSQISED 254


>gi|189426007|ref|YP_001953184.1| PAS/PAC sensor hybrid histidine kinase [Geobacter lovleyi SZ]
 gi|189422266|gb|ACD96664.1| PAS/PAC sensor hybrid histidine kinase [Geobacter lovleyi SZ]
          Length = 810

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 70/238 (29%), Gaps = 13/238 (5%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            ++  ++     F    A+G  +G  VD  +                 ++       +Q+
Sbjct: 27  VIRVVMDDNYPPFIFRSADGALQGILVDQWQIWEQKTGVHAE---LNAMDWAVAQKRMQA 83

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAG 153
            + D++          E SL   F        Q         GI  V+ L G ++ V+ G
Sbjct: 84  GEFDVID---TIFKTEERSLKYDFSKPYQKIDQPIYFSRAISGIKDVNSLKGFTVAVKEG 140

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
                 L  +          + +   E I  A +  +   ++ D                
Sbjct: 141 GAIIGFLKQH-----GIDALVTYPSYEAIIHAAKEGKVSVFSADQPPASYFLYKMGIADR 195

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271
                + +       A+++G+T    +V     A+   E   I Q      ++  +N 
Sbjct: 196 FKQ-TEPLHSGQFHRAVLKGNTATLQLVEKGFDAITPTEFKRIEQSWYGSAARYGSNY 252


>gi|269965388|ref|ZP_06179508.1| ScrB [Vibrio alginolyticus 40B]
 gi|269830034|gb|EEZ84263.1| ScrB [Vibrio alginolyticus 40B]
          Length = 302

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 34/284 (11%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLK-CGINTGLVGFAEVKANGD---WKGFDVD 62
           ++ + L++    S +  +  L  I++RG L+  G+      F      G+     G DV+
Sbjct: 10  LATVALMVTSVASSAAWSDDLQQIRERGVLRHIGVP--YANFVSYIEQGEVETLTGLDVE 67

Query: 63  FCRALSSAIFDDPSKIQ--YLPLNAKERFLALQSKQIDILSR----------NTDWTLLR 110
             +  + ++      +   +  +  K     +Q      +                T+L 
Sbjct: 68  IIKGFAKSLGVQYQYVPAQWSDVVGKLTGQNVQYHNKQAVVGESVPIEGDLIANGVTILD 127

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--------------LSGASICVQAGTTT 156
             S  + F    +  G   +      +S +                + G  +     +  
Sbjct: 128 WRSEVVDFSQDYFPSGVWLVSRSDSSLSPIKPSGSVDEDVKNVKQLIDGREVLALEHSCL 187

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           +  L D +        P     + E+  A    + DA +  +     L      P E  +
Sbjct: 188 DPNLYDLYDTGAKVILPDGARLLNEMVPAIM--KNDAESTLLDVADTLIALEKWPGEIKV 245

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           +  I     +A A  +   E          ++          KN
Sbjct: 246 IGPISENQKMAVAFRKNSPELRKAFDRYLDSIKKDGSYEKLVKN 289


>gi|139439951|ref|ZP_01773288.1| Hypothetical protein COLAER_02326 [Collinsella aerofaciens ATCC
           25986]
 gi|133774717|gb|EBA38537.1| Hypothetical protein COLAER_02326 [Collinsella aerofaciens ATCC
           25986]
          Length = 463

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 22/220 (10%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L   ++T     A   A+G+  G+ VD  RAL+  +     K+ +  ++A     AL 
Sbjct: 189 GTLTVALDTSDAPQAMQDADGNLTGYAVDAARALACRMG---LKVAF--VDASSADSALS 243

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV----SQLSGASIC 149
            K+ DI   +       + + G      T       +  K     S+      L+ A++ 
Sbjct: 244 DKKADIFIGDI------KSAGGDISSLGTCLYDAAAVFGKSSDGESLSVSTETLNTATLG 297

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           VQ  + ++  LA      N K     F  + E   A  +   D    D +A   L     
Sbjct: 298 VQTSSASQEALAKQSITANQK----TFSNINECFEALESGEVDYVICDSTAGGYLARLMS 353

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
              +   +  + + S L  A +  + E    VS     + 
Sbjct: 354 ---QISYVGTLEAPSTLGVAGLSSNDELCRAVSDALDGIT 390


>gi|170726606|ref|YP_001760632.1| hypothetical protein Swoo_2256 [Shewanella woodyi ATCC 51908]
 gi|169811953|gb|ACA86537.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
          Length = 299

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 94/278 (33%), Gaps = 25/278 (8%)

Query: 1   MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +   +++ LCL+    T+ S  A    DI +  ++   +      F+    +  + G 
Sbjct: 1   MKRINSLALGLCLLTCVLTAPSLVARSFDDIIESQYITVAVYRDFAPFSYQIDDAAY-GI 59

Query: 60  DVDFCRALSSAIFDD--------PSKIQYLPLNAKERFLALQSKQIDILSR---NTDWTL 108
           D+D    ++  +  +           ++    N   +   L+    D++ R   +  ++L
Sbjct: 60  DIDLAHQIAKELGLELRLRWMTADENVEDDLRNNLWKGHFLKRSVADLMLRVPYDKAYSL 119

Query: 109 LRE-----ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLA 161
           +R+     +   +      + +    I +  +   +S+++      I V+  +  +  L 
Sbjct: 120 MRDDIGELVHEQVHMFAPYHTESWQIIYNSTQIESVSTIAVFQYHDIGVEVDSIPQFYLT 179

Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL---TNDRPSEHVILP 218
             F    M+     F  +     A R    DA  G  S +   +    T   P      P
Sbjct: 180 SAFGGR-MRERAKHFSSIPLAIDAMRQGEVDAAMGLRSQISHFQQEIDTTKYPLAQNAFP 238

Query: 219 DIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            +  +   +  AI     +    +     +M+   E+ 
Sbjct: 239 MMGRQQWDIGMAIKSQYRQLGYAIGDIVESMIKQGEME 276


>gi|152983707|ref|YP_001346737.1| hypothetical protein PSPA7_1353 [Pseudomonas aeruginosa PA7]
 gi|215275604|sp|A6V102|MLTF_PSEA7 RecName: Full=Membrane-bound lytic murein transglycosylase F;
           AltName: Full=Murein lyase F; Flags: Precursor
 gi|150958865|gb|ABR80890.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 490

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 11/237 (4%)

Query: 6   FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           ++    + +L        A   L  ++K G L+         +     NG+  GF+ +  
Sbjct: 14  WLLATGIFLLLAGCSEAKAPTALERVQKEGVLRVVTRNSPATY-FQDRNGE-TGFEYELA 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +  +  +  +   ++    +  +   A  S+           T  R+    + +      
Sbjct: 72  KRFAERLGVE---LKIETADNLDDLYAQLSRAGGPALAAAGLTPGRQDDASVRYSHTYLD 128

Query: 125 DGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEI 182
                I    +   +    L G  I V  G++    LA+  K +  +KY       V ++
Sbjct: 129 VTPQVIYRNGQQRPTRPEDLVGKRIMVLKGSSHAAQLAELKKQYPELKYDESDAVEVVDL 188

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
                    D    D + L   ++            +      LA A+  GD +   
Sbjct: 189 LRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARG---LAWALPGGDDDSLM 242


>gi|217968068|ref|YP_002353574.1| metal dependent phosphohydrolase [Dictyoglomus turgidum DSM 6724]
 gi|217337167|gb|ACK42960.1| metal dependent phosphohydrolase [Dictyoglomus turgidum DSM 6724]
          Length = 648

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 11/182 (6%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            +  +  LK  I+     F  +   G+  G  VDF +  S  +     K++  P+  ++ 
Sbjct: 21  QVNAQNSLKIIIDKDYPPFTFIDEKGNLIGISVDFWKIWSERMG---IKVELFPMEWEKA 77

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGAS 147
             AL   + D +          E    L F    +          +   ISS+  L+   
Sbjct: 78  QRALLEGKFDAID---TIFETPEREKYLIFSKPIFKITSSIYYKTEIPKISSLKDLTPYL 134

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + V+ G      L +     N       F+   EI  + +      +  D        + 
Sbjct: 135 VGVKRG----DALIEVALKENPYISFKFFDDYSEIVESAKKGEIKVFLMDDIPASYYLIK 190

Query: 208 ND 209
           +D
Sbjct: 191 HD 192


>gi|312876185|ref|ZP_07736172.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797000|gb|EFR13342.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 1016

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 75/249 (30%), Gaps = 22/249 (8%)

Query: 1   MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M +      ++L +II+FF S +              +K  ++     F+   + G   G
Sbjct: 1   MKRIRMLVNTVLAVIIIFFLSPAYAGHTP--------VKFEVDKSYPPFSYT-SGGRIYG 51

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F +D    +      D  K+        + +  L   +ID+ +      ++ E    + F
Sbjct: 52  FTIDLANLVFE---PDKFKLALSSDTWNQVYKKLVEGKIDVAAP---VAIVEERKKEVYF 105

Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               +    G    K      ++  L    + V     TE  L +    +        + 
Sbjct: 106 SKPIFTRHVGLYTSKEFSKNITLKNLEDFKVGVMQSDYTETLLKEKLGVN----RYYTYP 161

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            +E++  A    + DA            + N       +    I     A A+ +   E 
Sbjct: 162 TIEDLIYALVDGKIDAALMSQEIANYFLVKNGLRDRAELKIKNIFTVKSAFAVSKKRPEL 221

Query: 238 YNIVSWTHY 246
              ++    
Sbjct: 222 VAYINQRLN 230


>gi|290581035|ref|YP_003485427.1| putative ABC transporter amino acid binding protein [Streptococcus
           mutans NN2025]
 gi|254997934|dbj|BAH88535.1| putative ABC transporter amino acid binding protein [Streptococcus
           mutans NN2025]
          Length = 273

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 49/148 (33%), Gaps = 6/148 (4%)

Query: 35  FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
            +    ++    F   K    + G+D+   +A+         K+++  ++       + S
Sbjct: 32  TITVATDSDTAPFTYKKDK-KFDGYDIALVKAIFKE--SKKYKVKFETVSFSSILTGIDS 88

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154
            +  + + N      +E +    F              K     S+  LSG S+ V AG+
Sbjct: 89  GRYQLSANNF--NYSKERAEKYLFSNPVSKSNYAIASKKG-KYKSLDDLSGKSVEVYAGS 145

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEI 182
                L ++ K H  K    +      +
Sbjct: 146 NYAAILENWNKNHTEKTAIKIHYVANTV 173


>gi|87118306|ref|ZP_01074205.1| extracellular solute-binding protein, family 3 [Marinomonas sp.
           MED121]
 gi|86165940|gb|EAQ67206.1| extracellular solute-binding protein, family 3 [Marinomonas sp.
           MED121]
          Length = 248

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 60/221 (27%), Gaps = 26/221 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + ++ L    +             + R   +         +    +    KGFD
Sbjct: 1   MLKPLIILLITLFSSLYLHA----------QDRPVFRIATEH-YPPYEMKDSPTGLKGFD 49

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D    + S +  +        +        L   +   +          + +  + F  
Sbjct: 50  YDVMVEIFSRLNYEIE------VEFLPWNRVLAYAKHGKVLGILTCAYKEDRNDFIVFSD 103

Query: 121 ITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                  GF M         +++  L G  +   +G T+   LA+      +  +PI   
Sbjct: 104 PISKRTDGFYMRNGFNGLIPNTLEDLKGQRVASVSGYTSLKQLAE------LNMNPIEVL 157

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
             E      + +R D    +  +   +       ++    P
Sbjct: 158 NTELAIGMLKRNRYDYLLLNKQSTDFIIKQLGLSNDFKFYP 198


>gi|297627446|ref|YP_003689209.1| polar amino acid ABC transporter, binding protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923211|emb|CBL57805.1| polar amino acid ABC transporter, binding protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 339

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 80/272 (29%), Gaps = 23/272 (8%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +  A +  +I+  G L    N  L   +    +G   G D D  +A++  +   P    Y
Sbjct: 70  ALAALVPQEIRDSGELVVDSNPTLPPMSFKADDGTVAGVDADLAKAIAGRLGLRPQVQPY 129

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
               ++   L       DI   ++  T                   +  +        + 
Sbjct: 130 SLDGSEWHVLGRSLGDADISVSSSVITAS--SRWNWKNVQYMKTGLRWIVRAGNPTGFNA 187

Query: 141 SQLSGASICVQAGTT------------TELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            +L G ++  +A                   + +  K    + H      V+E   A   
Sbjct: 188 DRLCGHALQYEANYDKGGNRRSIAAAHVAQRVKECAKLGLPEAHANGVHNVDEEATAVTD 247

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +A   +     A  +         +       +     +  G  ++ +++S T  ++
Sbjct: 248 GSVEAAVMESP--AAEYVVARSNGALELAGTQWEATVYGIQLNTGAGDFADLISRTLTSL 305

Query: 249 V-------TAEELGITQKNINQVSKDTTNPDV 273
                     E+ G++    ++   D + P+V
Sbjct: 306 ADDGTYGRILEKWGLSAYASSEFPVDPSTPEV 337


>gi|114770263|ref|ZP_01447801.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [alpha proteobacterium HTCC2255]
 gi|114549100|gb|EAU51983.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [alpha proteobacterium HTCC2255]
          Length = 271

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 78/258 (30%), Gaps = 25/258 (9%)

Query: 1   MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGD 55
           M K   VS + + +L   +F+     +   L      G       N     +    A   
Sbjct: 1   MSKKMIVSAIAMALLATNAFADGHCASGKTLEK----GKFTIATGNPAYFPWVLDDAPES 56

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREIS 113
            +GF+     A++  +      + ++  +      A+Q      D+  +    T  R+  
Sbjct: 57  GQGFEAAVAYAVAEEMGFSKQDVIWVRSSFD---EAIQPGVKNFDVNMQQYSITSERD-- 111

Query: 114 LGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F    Y      ++        +++  L G        TT    +     +     
Sbjct: 112 QVVDFSVPYYTAPMAVLVGAGATNTSATIKALKGLKWGAVGSTTA---VQKIGSSVQPDN 168

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN---DRPSEHVILPDIISKSPLAP 228
            P+++    +++AA  A++ DA   D+     L        +        +  +      
Sbjct: 169 APLLYADNADVNAAITANQIDAAMFDLPTALFLSAVMIEGSKVIGQFPSSESDNADQFGM 228

Query: 229 AIIQGDTEWYNIVSWTHY 246
            + +G+    + V     
Sbjct: 229 LMEEGNP-LKSCVDEALN 245


>gi|52840343|ref|YP_094142.1| glutamine ABC transporter [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627454|gb|AAU26195.1| glutamine ABC transporter [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 258

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKG 58
           M +  F+ ++ L    F                  L  G+      F      G   + G
Sbjct: 16  MKRFMFILLMFLNFYTFG---------------KPLIIGVPEFAPPFVSRSGGGGETYFG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           F++D   ++   I     + QY  +N ++ +  L   ++DI+   T       +     F
Sbjct: 61  FNIDLMNSICKII---EMECQYKGMNIQQLYTNLNQGKLDIMLAPTPIVST--VGTNYIF 115

Query: 119 RPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                      I       I+S++ L G  +     T     LA++F+ +   +  + F 
Sbjct: 116 SLPYLPSNAQVITLKANNDINSLADLKGKKVGTLKYTLYGSLLAEHFQDY---FDLVQFS 172

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTE 236
           ++ ++  A    + +A   +     A    ++  +E   + D ++         ++ +  
Sbjct: 173 KLSDMALALSNQKIEAIVLNT--NAAKYAMSNSATELKFVGDKMAIGDGYGILALKNNAP 230

Query: 237 WYNIVSWTH 245
               ++   
Sbjct: 231 LIMKINKAL 239


>gi|299135348|ref|ZP_07028539.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
 gi|298590325|gb|EFI50529.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
          Length = 362

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 3/122 (2%)

Query: 34  GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           G L  G       FA    NG W G  ++  + L+  +  +   ++   + A      ++
Sbjct: 31  GELVIGTKVA-PPFAMKDENGHWSGISIELWQHLADRLKWNYRFVEADTVPA--LLDGVK 87

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153
           + + D        T  RE +L           G      +      V +   +   VQA 
Sbjct: 88  AGKFDAAISAISITAEREQTLDFTTSYFYAGTGVAVQADRISNWMPVIRSLTSWSFVQAA 147

Query: 154 TT 155
            T
Sbjct: 148 LT 149


>gi|149376977|ref|ZP_01894731.1| Signal transduction histidine kinase [Marinobacter algicola DG893]
 gi|149358754|gb|EDM47224.1| Signal transduction histidine kinase [Marinobacter algicola DG893]
          Length = 935

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 70/243 (28%), Gaps = 13/243 (5%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+         F   + NG   G   D  + L   +  +    + +  N+ +   AL+S 
Sbjct: 293 LRVAFRPDWPPFEYTQ-NGQSAGLVPDLVKRLEEQL--NIRFSRQVMDNSADEENALRSG 349

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154
           ++DIL      +    +     F            +      I  + +L    + V    
Sbjct: 350 EVDILPA---MSRTPRVEESFLFSRAYLTVPIALAIRDDGRFIGELRELRDEKVGVVNRQ 406

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
                  DY   ++          +EE   A      D     I A+          +  
Sbjct: 407 AGH----DYLLINHPNLDLYPVTSIEEGLLALSNGDLDVMVTHIPAVSYTVARLGLSNLR 462

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE-ELGITQKNINQVSKDTTNPDV 273
           +          L  A+ +   E   I++    ++   E E    +     + ++T    V
Sbjct: 463 ITSITPYQYE-LRFAVSKERPELQRILNKALGSLDATETESIYNRWIHLDIEQETDYTVV 521

Query: 274 QRF 276
           +R 
Sbjct: 522 RRI 524



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 16/236 (6%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           +R   + G+ +G V        G+  G  +D+   LS  +      I+ +    ++    
Sbjct: 36  ERESFRVGVRSGQVPLVFDTGEGELAGIFIDYLNRLSEKLG---VPIEAVSAPDEQLGAW 92

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           LQ   +D              ++ L+  P+       F+     GI ++S L  A+I + 
Sbjct: 93  LQDGTLDARLSTRLAHRSPPSNVVLS-SPLMSLTYGIFVGADDAGIRTLSDLEDANIALI 151

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-R 210
                +  L D        + P+    + E      + + DA+ G +  +     +    
Sbjct: 152 TNDPNQFALLDPV----NSFSPVPVSSISEAVGRVLSGQADAFLGPVPVVSDYLQSAMVN 207

Query: 211 PSEHVIL---PDIISKSPLAPAIIQGD----TEWYNIVSWTHYAMVTAEELGITQK 259
                 L     +     +A    Q +     + Y +++    A+   E   I Q 
Sbjct: 208 GVGVATLLNQQSVDVVLEMAAQSDQENNQKSDQLYRVLNQAVLAIDHGEHRSIRQS 263


>gi|27381835|ref|NP_773364.1| hypothetical protein bll6724 [Bradyrhizobium japonicum USDA 110]
 gi|27355004|dbj|BAC51989.1| bll6724 [Bradyrhizobium japonicum USDA 110]
          Length = 362

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 72/238 (30%), Gaps = 19/238 (7%)

Query: 28  GDIKKRGFLKCGINTGLVG---FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
            +I   G L+  I     G   ++     G + G  VD  + +++ +      +  +  N
Sbjct: 128 DEIAPTGKLRVAIAISPAGGAFWSTRTETG-YAGVPVDLGKEMAAQLGVGVEYV--VHQN 184

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--Q 142
           + +   A      D+           E    + F PI       +I+     ++S +   
Sbjct: 185 SGQITDAASKGTWDVTWLP----KDPERESKMMFGPIYEVADATYIVKAGSNVTSFASLD 240

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
             G  +     TTT      + +          ++  +EI    ++   DA+      L 
Sbjct: 241 QPGIKVAAVNATTTMRGAVAHLR----NAEVTGYQTYDEIFGLLKSGEIDAFALSRDQLN 296

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            +           +L +   K+  A A+  G +     V+           L     N
Sbjct: 297 KMAQKIPG---TKVLDETFKKTVTAVAVPLGHSLALTFVTKFMNEATINGTLRKAYDN 351


>gi|223935376|ref|ZP_03627293.1| histidine kinase [bacterium Ellin514]
 gi|223895786|gb|EEF62230.1| histidine kinase [bacterium Ellin514]
          Length = 586

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 86/299 (28%), Gaps = 34/299 (11%)

Query: 1   MYK------DFFVSILCLIILFFTSFSTNASILGDI--------------KKRGFLKCGI 40
           M +           +  L   F  +   NA    ++              ++   +  G+
Sbjct: 1   MKRTATRDLRLIWILCLLAGSFLVTAIGNAQTNLNVSKPVRLSEAEKAWLRQHPVVYWGV 60

Query: 41  NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI- 99
           +     F+     G   G +V+    ++     +   +              ++   +I 
Sbjct: 61  DPHWPPFSSFDRQGRASGINVEMVELIAKRAGLNIKLV----QTPAWSETLRKADTREID 116

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGT-TT 156
                  T  RE   GL F           I  +     +  +  +    I +     TT
Sbjct: 117 FIGGIARTEERERLHGLKFTEAYCSFPTAIITRENTPFFTPLEELIKSLRIALPRNYATT 176

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E  L DY  A       ++ +  EE   A   ++ DA   ++ A  +  +     +   I
Sbjct: 177 EELLRDYSGAR-----AVLTDTEEESMLAVAGNKADATVLNL-ASASYIVHMRGLANLKI 230

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                 +  L  A+     E ++I+      +   E   I  K I   + +  N    R
Sbjct: 231 SGFTDPEFYLRLAVRNDMPELHSILEKGLATIDKREAEAIYAKYILPGTLEEINWRTWR 289


>gi|291279682|ref|YP_003496517.1| hypothetical protein DEFDS_1294 [Deferribacter desulfuricans SSM1]
 gi|290754384|dbj|BAI80761.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 909

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 71/194 (36%), Gaps = 18/194 (9%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F +  L   ++F             +     L  G+       + +K + +  GF VD
Sbjct: 4   KKFVLIFLIFFVIFVNV----GFTNDKV-----LTVGVWNN-PNLSIIKDS-EISGFVVD 52

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             + ++     +  K +++       +  L + +ID+L     ++  R   +        
Sbjct: 53  IFKYIAEK---NDIKYKFVAGKWANLYSDLVNGEIDVLIP-IAYSDTRLKYMKFTDYNYP 108

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAG---TTTELTLADYFKAHNMKYHPIVFERV 179
            F   G I+ K K I +++ L G  I +       T    +  Y K +N+ Y P+     
Sbjct: 109 VFMNWGVIISKSKNIKTITDLKGKRIAIVKNDIFYTGTFGMETYLKLYNIDYKPVSVSSY 168

Query: 180 EEIDAAYRAHRCDA 193
           EE+    ++   DA
Sbjct: 169 EEVLNLVKSGDVDA 182


>gi|89092394|ref|ZP_01165348.1| PAS/PAC sensor hybrid histidine kinase [Oceanospirillum sp. MED92]
 gi|89083482|gb|EAR62700.1| PAS/PAC sensor hybrid histidine kinase [Oceanospirillum sp. MED92]
          Length = 1079

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 9/177 (5%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
           ++  LK         F+    N + +G+  D+ + ++  +  +   +        E    
Sbjct: 279 EKPVLKVMNLNTFPPFSFY-ENNNPQGYTTDYMQLMAETLGVEIDFVSNK--PWHEYLEM 335

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151
           L+  ++D L  +   T  R+  +             GF ++    I + + L    + V 
Sbjct: 336 LKKGELD-LIPHIAVTEERKSFVDYTNFDH-IVYTTGFAVNSDVVIETAADLKDKVVAVA 393

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
             T     L+ ++         ++     E        R DA  G + AL      N
Sbjct: 394 NKTFLHSYLSKHYP----DLKLLLTSSTSEAIQTVAQGRADAVIGSLPALNYYIQKN 446


>gi|327485587|gb|AEA79993.1| extracellular solute-binding protein, family 3/GGDEF domain protein
           [Vibrio cholerae LMA3894-4]
          Length = 461

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 86/253 (33%), Gaps = 16/253 (6%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F + ++   +LF +             +R  L    +     ++ +   G   G  +D
Sbjct: 8   KLFLLLMIAWPLLFGSMSEA--------VERQTLTITNSKAWKPYSYLDEQGQPSGILID 59

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F  A   A   D   I++  ++  +   A++  + D +      +  R     L F    
Sbjct: 60  FWLAFGEANHVD---IEFQLMDWNDSLEAVKLGKAD-IQAGLIRSPSRLAY--LDFAEPL 113

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                   +H+      +  L   ++ V  G        ++ +    +   I +   E +
Sbjct: 114 LTIDTQLYVHRTLLGDKLDTLLSGAMNVSLGVVKGGFEQEFMQREYPQLKLIEYANNELM 173

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            +A +    D +  D        + ++   +   +  + S+  L PA+ +G+ +    V 
Sbjct: 174 MSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLYSEE-LRPAVAKGNRDLLEQVE 232

Query: 243 WTHYAMVTAEELG 255
              +A +++ E  
Sbjct: 233 Q-GFAQLSSNEKN 244


>gi|218779348|ref|YP_002430666.1| histidine kinase [Desulfatibacillum alkenivorans AK-01]
 gi|218760732|gb|ACL03198.1| histidine kinase [Desulfatibacillum alkenivorans AK-01]
          Length = 846

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 64/234 (27%), Gaps = 13/234 (5%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +        L   +K   ++         F   +   + KG   D  RA++  +  + 
Sbjct: 43  ALSLTQAEKDWLARHRK---IRVAGPRNFPPFYFYEDAPEPKGVTADIMRAVAGTLGVEV 99

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-MHKK 134
             I    +   +     +++++D +       +        +F           I     
Sbjct: 100 EVIP--DIPWPQVLEMAKNREVDWIPCAA---VSEPRKAFWSFTDPFMSFPMLIIATPDT 154

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             I  +  L+G  +         +   D+     + Y  I      +        + DA 
Sbjct: 155 GFIGGIHDLNGKKLSGVKN----IAWRDWLAKAGVSYEWIPAATPLDSLRMVSEGKADAT 210

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +++            +  V  P       L  A+     E  +I++    AM
Sbjct: 211 IENLATSVYNIDRYGLSNLKVAAPTAYDAYSLHFAVRNDWPELQSILNKALAAM 264


>gi|73541465|ref|YP_295985.1| extracellular solute-binding protein [Ralstonia eutropha JMP134]
 gi|72118878|gb|AAZ61141.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha
           JMP134]
          Length = 295

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 73/245 (29%), Gaps = 18/245 (7%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL--- 83
           L  I++ G LK  +  GL  F+ V  +  + G DV   +AL+S +    S + +      
Sbjct: 40  LARIRQNGTLKVAVYKGLPPFSAVAGS-QYTGIDVALAKALASELGLQVSLLPFDADDDM 98

Query: 84  -----NAKERFLALQSKQIDILSRN-TDWTLLREISLGLAFRPITYFDGQGF-IMHKKKG 136
                +   R   L     D++     D T +R     L F P             +   
Sbjct: 99  SDDLRSMVWRGHYLGYGPADVMLHVPVDRTFMRANEQALIFAPYYRETFVLVRDRQRVPD 158

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +  +  L+G      AG+     L              ++   E+   A  +    A   
Sbjct: 159 VRGLEDLAGQPTGAAAGSGGASALLSGAGGALRD-KVKIYPEGEDALRALFSGEIAAVVV 217

Query: 197 DISALY-ALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVT 250
             +    ALK      +            P     +  AI  GD      +     A+  
Sbjct: 218 TRAQYESALKAAGQSATRFATADISSPLLPPRGWAIGMAIKAGDKALAESLENALDAVRR 277

Query: 251 AEELG 255
             EL 
Sbjct: 278 KGELA 282


>gi|332111659|gb|EGJ11640.1| sensor histidine kinase/response regulator [Rubrivivax
           benzoatilyticus JA2]
          Length = 897

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 70/245 (28%), Gaps = 15/245 (6%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDP 75
                  A+    ++    +  G+      F           G DV+    LS       
Sbjct: 1   MAHGPARAAAGDAVQAGDVVVVGLLERFPPFHEWRADQPAPSGMDVELLTELSRQTGLRF 60

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KK 134
              ++  +       AL   +I +    T      + +L L F        Q F+     
Sbjct: 61  RYERF--VEYPALLQALADGRIRL---ATAIAQTPDRALTLRFTRPYASVQQAFVGPAAI 115

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + +   LSG  + V  G   E   A+ F A         +  ++E   A +    D  
Sbjct: 116 TSVPATPDLSGRRLAVTRGYVAESIAAERFPAAARP----AYGTLQEALDAVQRGDADFV 171

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
              +  L  L    +RP   + +       P     +  D     +V     A + A + 
Sbjct: 172 FEALPTLRTLVA--ERPGSGLAVLRSYGF-PEGHLRLAADLRDAALVRQ-LDATIAALDP 227

Query: 255 GITQK 259
             T+ 
Sbjct: 228 AFTKA 232



 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 72/241 (29%), Gaps = 9/241 (3%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G   G + F+     G   G  +     ++       S   ++P++      AL   
Sbjct: 257 LRVGYLPGDLPFSAEVRPGVADGLGIRMMNEVARRAGL--SIASFVPMDLASGLQALADG 314

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           ++D++      T + E    ++F      +    I  ++  +  + QL+G  + +  G  
Sbjct: 315 RLDVMLG---LTDVAERRARMSFVGPYRANPLVLISRRQFSVWDLQQLAGQRLAMIRGYF 371

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
               +    +A       +     +E        R +A    +   YA        + H+
Sbjct: 372 GTPYV----RAAYPNVDIVECAGFDECLTLVEQGRAEAALYGLQGAYARLGPRAGSTLHI 427

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275
                         +          +     A++  +   I ++      +D  +    R
Sbjct: 428 TGTVAGLYDEHNLGVSLARATLAPRLRDALNAVLAEDMPRIEREWAAAEQQDRVDWARVR 487

Query: 276 F 276
            
Sbjct: 488 L 488


>gi|291278989|ref|YP_003495824.1| hypothetical protein DEFDS_0586 [Deferribacter desulfuricans SSM1]
 gi|290753691|dbj|BAI80068.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 753

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 9/172 (5%)

Query: 27  LGDIKK-RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
           L  I      +K         F      G+ +GFD D   +  +    D     ++    
Sbjct: 27  LSTIMAHSNEIKI-YYAEYEPFIYRDMYGELRGFDYDIISSFCTKYKLD---CDFIQTTF 82

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
                A++ ++ DI   +   T  R+      F       G   ++       S   L  
Sbjct: 83  PGLLDAVKHEKCDIAVGSIYVTEERKKF--GLFTIPYLHSGLVAVIP-YNKNYSFEDLFK 139

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             + V+   T    + +    +N   +  +F+   +   A      D    D
Sbjct: 140 LRVGVKRKATGHKYIVEQMDKYN-DLNVNIFDSTLDSFKALEYGYIDWLIND 190


>gi|291561988|emb|CBL40799.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4]
          Length = 307

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 48/182 (26%), Gaps = 20/182 (10%)

Query: 32  KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91
            +  L    N     F  V  +  +KG D++     +  +  +   +    ++     L+
Sbjct: 119 SKDQLVVATNASFEPFEYVDGD-SYKGIDMEIAALFAQELGKE---LVIENMDFDAVCLS 174

Query: 92  LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--------L 143
           +   + DI          RE    + F    Y   Q  +           +        L
Sbjct: 175 VGQHKCDIAMAGLTINEEREEY--VTFSDPYYKASQRLVTLADDTAFDDCKDAASVEEVL 232

Query: 144 SG----ASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            G      I  Q GTT +  +   D +         + ++                   D
Sbjct: 233 KGLSASDKIGGQQGTTAQYFVEGSDDWGFEGFPAEWVPYKSASLAVQDMINGNVKYVIID 292

Query: 198 IS 199
            +
Sbjct: 293 AA 294


>gi|73662245|ref|YP_301026.1| truncated ABC-type amino acid transport system periplasmic
          component [Staphylococcus saprophyticus subsp.
          saprophyticus ATCC 15305]
 gi|72494760|dbj|BAE18081.1| truncated ABC-type amino acid transport system periplasmic
          component [Staphylococcus saprophyticus subsp.
          saprophyticus ATCC 15305]
          Length = 76

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 7/72 (9%)

Query: 1  MYKDFFVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53
          M K     IL    +       +          IK RG L+ G++     +     V   
Sbjct: 4  MIKLIMTVILISSGILTYISPVAHGAEQDQWDKIKARGELRVGLSADYAPYEFEHNVNGK 63

Query: 54 GDWKGFDVDFCR 65
           ++ G D+D  +
Sbjct: 64 SEYAGIDIDLAK 75


>gi|256827647|ref|YP_003151606.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Cryptobacterium curtum DSM 15641]
 gi|256583790|gb|ACU94924.1| periplasmic component of amino acid ABC-type transporter/signal
           transduction system [Cryptobacterium curtum DSM 15641]
          Length = 346

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 39/271 (14%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNAS----------ILGD---------IKKRGFLK 37
           M +       VS L + +L     +  +                        I K G L+
Sbjct: 1   MKQRVSLLAVVSALLIAVLGLCGCAQVSELSSSLFGKPYTPEKLQPTVSTPTIGKEGVLR 60

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
            G++     ++  + +G   G DVD   AL++ +      +        +   AL++  +
Sbjct: 61  VGVDASNAPYS-TQVSGKLAGIDVDMAAALAAQMGLSLELVDV----GSDAEGALKAGTV 115

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D++          + S                   K +  S  S  S  SI  QA + + 
Sbjct: 116 DVVMSMDSS----DSSSSYWLSDPYLQTCVALFS-KGQASSVPSASSSVSIEAQAASMSA 170

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
             +++ F              ++   +     + D    D      +  T         L
Sbjct: 171 WEVSNQFG----DEALKTVPDLKTAFSDLNDGKVDYVAADAVIGVYITHTTHSDVHITAL 226

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
              +S   +       + E    VS    A+
Sbjct: 227 MQKVSGRSIGVLS--SNDELKKAVSDALDAI 255


>gi|227015847|gb|ACP17944.1| putative multi-sensor hybrid histidine kinase [Pseudomonas
           nitroreducens]
          Length = 1215

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 67/212 (31%), Gaps = 15/212 (7%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           ++  L   +   +  +++G   D    + +             + A        + +   
Sbjct: 312 VDRALAPISFFDSQQNFRGIAADLLELIHARTGLSFDVRPEPSVTAMLDDAM--NGKAKA 369

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTEL 158
           +      T+ RE    L F           ++    G   S++ L G  + V   +    
Sbjct: 370 I-GALTPTMEREEW--LTFTRPYMTASFVVVVANNSGWFHSLADLRGRRVAVPKAS---- 422

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            L ++ +  + +   ++     +        + DA     ++   L     R    + + 
Sbjct: 423 VLENFMREKHPEVQLVLVANNVDDLQMISEGKVDAGIHLSTSANYLISRYYRD---LRVA 479

Query: 219 DIISKSP--LAPAIIQGDTEWYNIVSWTHYAM 248
             + + P   + A+ Q D E  +I++    A+
Sbjct: 480 ASLDREPGQFSIAVSQTDPELLSILNKAILAI 511



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 10/178 (5%)

Query: 31  KKRGFLKCGIN-TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89
           + +  L  G+       F    +  D +G   D+   ++ A+       +Y   +     
Sbjct: 58  RSKRTLVLGVTAPDYAPFDITASGTDLEGVTADYMGVIAEALNVRIEVRRY--ADRSSAI 115

Query: 90  LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149
            ALQ  +ID+LSR    T     + G++     + +    +  +   + S  QL G  I 
Sbjct: 116 DALQHGEIDLLSRA---THYESNAPGVSLSQPYFINQPVVVGPQGVRLDSGDQLQGKRIS 172

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           V +   +   +A Y          + F+ V +   A    + D + GD  +   L   
Sbjct: 173 VVSDYFSSEEIAKYLPKA----TIMPFQSVRQALEAVAFGQADLFVGDAFSAQYLISQ 226


>gi|301629415|ref|XP_002943835.1| PREDICTED: ABC transporter arginine-binding protein 1-like [Xenopus
           (Silurana) tropicalis]
          Length = 281

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 79/281 (28%), Gaps = 13/281 (4%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K+   ++   I L   +   +A+ +    K G L  G +     +  ++      GFD +
Sbjct: 8   KNTLRTLGLAITLACVTPLLSAAEIKGTLKPGELSIGSDLTYPPYTYLEQK-TPAGFDPE 66

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           F + +   +   P   ++L        L + +++ D+++     T  R   +      + 
Sbjct: 67  FMQLMGKQLGLKP---RFLDTRFANLILGVNARRFDVVASALYVTPERAKQVDFL-SYLK 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFE 177
                  +            L G  +    G +    L          A         F 
Sbjct: 123 TGSSLMVLSAGDFKPQRPEDLCGKRVGSIKGASWVPKLNKVSADYCLPAGKPAIESREFP 182

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              E   A  A   D    D +            +  +   ++I    +  A+ + +   
Sbjct: 183 TSPEAAQALLAQAVDVQMEDAAVAKITVEKLQGKTV-ISSSELIYPVVVGLAVRKENPAL 241

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278
              ++     +      G      N    +    ++   LG
Sbjct: 242 LQALTGALSQIKQDGSYGKLLARYN--LAEPNAAEISAALG 280


>gi|291542753|emb|CBL15863.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ruminococcus bromii L2-63]
          Length = 508

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 28/103 (27%), Gaps = 6/103 (5%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            DIK  G L    N     +  V   G   G D     A+   +      +    +    
Sbjct: 164 KDIKYDGELHMATNAAFPPYEYV-EGGKIVGLDPMMATAICDKLGKK---LVIDDMEFDS 219

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
              A+Q+ + D        T  R     + F        Q  I
Sbjct: 220 VITAVQTGKDDFGMAGMTDTPERRK--NIDFSTSYANTTQVII 260


>gi|89093665|ref|ZP_01166612.1| bacterial extracellular solute-binding protein, family 3
           [Oceanospirillum sp. MED92]
 gi|89082061|gb|EAR61286.1| bacterial extracellular solute-binding protein, family 3
           [Oceanospirillum sp. MED92]
          Length = 254

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 67/239 (28%), Gaps = 9/239 (3%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
            IKK   ++         FA    NG  KG DV+    +   I  D   +    +  K  
Sbjct: 11  AIKKPAPIRFATLEDFKPFAWCD-NGVPKGIDVEIVTLVMDRI--DHPYV-IECIPWKRA 66

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGAS 147
             +++S ++D L      T  RE        P        F+   K    + +  L G +
Sbjct: 67  LSSIKSGKVDALFSAY-KTSEREAFAIYMNSPTHLSIFSVFVPKGKAFSFNRLEDLYGKT 125

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           + +  G +      D  +     +        +         R DAY             
Sbjct: 126 VGITGGYSVNPEF-DKARLAGR-FKVQELSSADSGLKMLARGRLDAYVNGKHVGLFTARN 183

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
                    L   +   P    ++                M  A +L      ++Q+++
Sbjct: 184 LGITDMIEPLDRPLH-EPKPAYLLFSKASNLRNKDQLISEMNQALDLLWKSGEVDQLTE 241


>gi|296269104|ref|YP_003651736.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
 gi|296091891|gb|ADG87843.1| extracellular solute-binding protein family 3 [Thermobispora
           bispora DSM 43833]
          Length = 245

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 58/248 (23%), Gaps = 39/248 (15%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L +     T               G L   +  G  G    + +G   GFD+   R ++
Sbjct: 1   MLGVAAALLTGCG----------DSGRLVVAVRLGQPGLVNQRPDGGLTGFDIAVVRYVA 50

Query: 69  SAIFDDPSKIQYLPLNAK------ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
             +     +I +    A+          A    +   ++     T               
Sbjct: 51  RELGYRDDQIVFTGDAAQADLVLGTMGPAFPGGETRYVAGPYLVTTT------------- 97

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
                  +      I  V  L+G   CV A  ++   L   F                  
Sbjct: 98  ----NILVRANDLAIRGVRDLAGR--CVCATGSSARPLVARFGEAWKHAFLAEANVPAAC 151

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
                  RCDA   D   L  L +    P         ++                + V+
Sbjct: 152 APLLADGRCDAIVADAPVLAGLAVQY--PGRFRFSGRPLATIEYGIGTSSA--ALRDRVT 207

Query: 243 WTHYAMVT 250
                M  
Sbjct: 208 EALRHMFE 215


>gi|126727120|ref|ZP_01742957.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Rhodobacterales bacterium HTCC2150]
 gi|126703548|gb|EBA02644.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Rhodobacterales bacterium HTCC2150]
          Length = 271

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 21/202 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGD 55
           M K F ++ +   ++  T+ +         L D    G       N     +    A   
Sbjct: 1   MTKIFALAAVSCALMSSTALADGHCAAGKTLVD----GKFTIATGNPAYYPWVMDDAPES 56

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREIS 113
            +GF+     A+++ +      + ++  +      A+Q      D+  +    T  R+  
Sbjct: 57  GQGFEAAVAYAVAAEMGFAADDVVWVRSSFD---EAIQPGAKNFDVNMQQYSITPERDEV 113

Query: 114 LGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             + F    Y      +          +++ L G        TT    LA+         
Sbjct: 114 --VDFSLPYYSAPMAVLASPGAIDTAPTLAALKGLKWGAVGSTTAVSKLAEVV---QPDS 168

Query: 172 HPIVFERVEEIDAAYRAHRCDA 193
             +++    +++AA  A++ DA
Sbjct: 169 DLLLYGDNADVNAAMSANQIDA 190


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.312    0.132    0.383 

Lambda     K      H
   0.267   0.0403    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,473,186,453
Number of Sequences: 13984884
Number of extensions: 108611706
Number of successful extensions: 326781
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 8327
Number of HSP's successfully gapped in prelim test: 4944
Number of HSP's that attempted gapping in prelim test: 304390
Number of HSP's gapped (non-prelim): 14993
length of query: 342
length of database: 4,792,584,752
effective HSP length: 139
effective length of query: 203
effective length of database: 2,848,685,876
effective search space: 578283232828
effective search space used: 578283232828
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 81 (35.8 bits)